BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (729 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 743 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 728 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 726 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 709 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 704 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 702 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 700 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 699 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 696 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 695 0.0 UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 692 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 692 0.0 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 691 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 689 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 689 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 689 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobact... 687 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 687 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 686 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 685 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 684 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 682 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 682 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 681 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 680 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 680 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 679 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 677 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 676 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 676 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 675 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 675 0.0 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 675 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 675 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 674 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 673 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 673 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 673 0.0 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 673 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 672 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 672 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 671 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 671 0.0 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 671 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 670 0.0 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 670 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 668 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 668 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 667 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 667 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 667 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 666 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 666 0.0 UniRef50_A0YBW6 Predicted signal transduction protein containing... 666 0.0 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 666 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 666 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 665 0.0 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 665 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 665 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 664 0.0 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 664 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 661 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 661 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 660 0.0 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 660 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 660 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 660 0.0 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 660 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 659 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 659 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 659 0.0 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 659 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 659 0.0 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 658 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 658 0.0 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 658 0.0 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 657 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 657 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 657 0.0 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 656 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 656 0.0 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 655 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 655 0.0 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 655 0.0 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 655 0.0 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 654 0.0 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 654 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 654 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 654 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 653 0.0 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 653 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 653 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 652 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 652 0.0 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 651 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 650 0.0 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 650 0.0 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 650 0.0 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 650 0.0 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 650 0.0 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 650 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 649 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 649 0.0 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 649 0.0 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 649 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 648 0.0 UniRef50_Q220B0 Response regulator receiver modulated diguanylat... 648 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 648 0.0 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 647 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 647 0.0 UniRef50_Q2SG37 Predicted signal transduction protein containing... 647 0.0 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 647 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 646 0.0 UniRef50_UPI00016AFAA6 predicted signal transduction protein con... 646 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Ch... 645 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 645 0.0 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 645 0.0 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 644 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 644 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 643 0.0 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_A3JAM8 Response regulator receiver modulated diguanylat... 642 0.0 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 642 0.0 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 642 0.0 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 642 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 642 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 641 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 640 0.0 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 640 0.0 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 640 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_B8GQW3 Signal transduction protein containing a membran... 640 0.0 UniRef50_Q1N453 Predicted signal transduction protein containing... 640 0.0 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 639 0.0 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 639 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 638 0.0 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 637 0.0 UniRef50_C6WW34 Response regulator receiver modulated diguanylat... 637 0.0 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 637 0.0 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 637 0.0 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 637 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 637 0.0 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 637 0.0 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 637 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 636 0.0 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 e-180 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 e-180 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 635 e-180 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 635 e-180 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 635 e-180 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 635 e-180 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 635 e-180 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 634 e-180 UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter... 634 e-180 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 634 e-180 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 634 e-180 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 634 e-180 UniRef50_Q3JAB6 Response regulator receiver modulated diguanylat... 634 e-180 UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 633 e-180 UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 633 e-180 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 633 e-180 UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodi... 633 e-179 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 632 e-179 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 632 e-179 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 632 e-179 UniRef50_B3E9P2 Diguanylate cyclase/phosphodiesterase with PAS/P... 632 e-179 UniRef50_C6WYR4 Response regulator receiver modulated diguanylat... 632 e-179 UniRef50_B8GNC0 Signal transduction protein containing a membran... 631 e-179 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (... 630 e-179 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 630 e-179 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 630 e-179 UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya... 630 e-179 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 630 e-179 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 629 e-178 UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 629 e-178 UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylo... 629 e-178 UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 628 e-178 UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax... 628 e-178 UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (... 628 e-178 UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacte... 628 e-178 UniRef50_C1DD31 Predicted signal transduction protein containing... 628 e-178 UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 628 e-178 UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/P... 627 e-178 UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/P... 627 e-178 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 627 e-178 UniRef50_C4KD26 Response regulator receiver modulated diguanylat... 627 e-178 UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-178 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-178 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-178 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-178 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 626 e-178 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-177 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 625 e-177 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 625 e-177 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 625 e-177 UniRef50_Q3IEE0 Putative orphan protein; putative conserved doma... 625 e-177 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 624 e-177 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 623 e-177 UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi ... 623 e-177 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 623 e-177 UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales b... 623 e-177 UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (... 623 e-177 UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 622 e-176 UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 622 e-176 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 621 e-176 UniRef50_C5T452 Diguanylate cyclase/phosphodiesterase with PAS/P... 621 e-176 UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillu... 621 e-176 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 621 e-176 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 621 e-176 UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanoth... 621 e-176 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 620 e-176 UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 620 e-176 UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 T... 620 e-176 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 620 e-176 UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 620 e-176 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 620 e-176 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_C0QA93 Signal transduction family protein (GGDEF domain... 620 e-176 UniRef50_Q2RTE0 Diguanylate cyclase/phosphodiesterase with PAS/P... 619 e-175 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 619 e-175 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 619 e-175 UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 619 e-175 UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfuro... 618 e-175 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_A1K633 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 618 e-175 UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=B... 618 e-175 UniRef50_C4XGB8 Putative response regulator receiver protein n=1... 618 e-175 UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/P... 617 e-175 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 ... 617 e-175 UniRef50_A1U2T3 Response regulator receiver modulated diguanylat... 617 e-175 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 617 e-175 UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Ta... 617 e-175 UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax... 616 e-175 UniRef50_Q2S7Q5 Predicted signal transduction protein containing... 616 e-175 UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulate... 616 e-175 UniRef50_Q21YJ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 616 e-175 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 616 e-174 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 616 e-174 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 616 e-174 UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax... 615 e-174 UniRef50_Q483V3 Sensory box/GGDEF/EAL domain protein n=5 Tax=Alt... 615 e-174 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase wit... 615 e-174 UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_Q2SPM3 Predicted signal transduction protein containing... 614 e-174 UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_C4KCC9 Response regulator receiver modulated diguanylat... 614 e-174 UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 614 e-174 UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudov... 614 e-174 UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Co... 614 e-174 UniRef50_D2L6G6 Response regulator receiver modulated diguanylat... 614 e-174 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 614 e-174 UniRef50_C6X941 Response regulator receiver modulated diguanylat... 613 e-174 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-174 UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria ... 613 e-174 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 613 e-174 UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Su... 613 e-174 UniRef50_Q2VYM7 Predicted signal transduction protein containing... 613 e-174 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 613 e-174 UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-174 UniRef50_C5V1X8 Response regulator receiver modulated diguanylat... 613 e-174 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 613 e-174 UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 613 e-174 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 613 e-174 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 613 e-174 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-173 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 613 e-173 UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclass... 613 e-173 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-173 UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='N... 612 e-173 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 612 e-173 UniRef50_B2J301 Response regulator receiver modulated diguanylat... 612 e-173 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 611 e-173 UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococc... 611 e-173 UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas m... 611 e-173 UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 611 e-173 UniRef50_A1ATR3 Response regulator receiver modulated diguanylat... 610 e-173 UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 610 e-173 UniRef50_Q1NX89 PAS:GGDEF:EAL:Response regulator receiver n=4 Ta... 610 e-173 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 610 e-173 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_B0SAR7 Signal transduction protein n=2 Tax=Leptospira b... 610 e-173 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 609 e-172 UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacte... 609 e-172 UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/P... 609 e-172 UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Di... 609 e-172 UniRef50_C6N027 Putative uncharacterized protein n=1 Tax=Legione... 609 e-172 UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/P... 609 e-172 UniRef50_A1SBS3 Signal transduction protein containing a membran... 609 e-172 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 608 e-172 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_Q1JVN0 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 608 e-172 UniRef50_C6MV72 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_B2UJT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/P... 607 e-172 UniRef50_C6P3U3 Response regulator receiver modulated diguanylat... 607 e-172 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 607 e-172 UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 606 e-172 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-172 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 606 e-172 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-172 UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-172 UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-171 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-171 UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-171 UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extra... 606 e-171 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 606 e-171 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 605 e-171 UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 605 e-171 UniRef50_D1B584 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 605 e-171 UniRef50_A3JAE8 Predicted signal transduction protein containing... 605 e-171 UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_B4RTU5 Sensory box protein n=2 Tax=Alteromonadales RepI... 605 e-171 UniRef50_A1TMD5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 605 e-171 UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 604 e-171 UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with respo... 604 e-171 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 604 e-171 UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain prot... 603 e-171 UniRef50_P72843 Regulatory components of sensory transduction sy... 603 e-171 UniRef50_B6R9S7 Response regulator receiver modulated diguanylat... 603 e-171 UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 ... 603 e-171 UniRef50_Q07VY4 Response regulator receiver modulated diguanylat... 603 e-170 UniRef50_A6CIW9 Sensory box protein/GGDEF domain protein n=1 Tax... 603 e-170 UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylat... 602 e-170 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_B4W5F5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 602 e-170 UniRef50_Q3SK35 Putative diguanylate cyclase/phosphodiesterase (... 602 e-170 UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 602 e-170 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_Q39XT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 602 e-170 UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinom... 602 e-170 UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_Q2S9L1 Predicted signal transduction protein containing... 601 e-170 UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_Q5P826 Response regulator receiver protein n=1 Tax=Arom... 601 e-170 UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (... 601 e-170 UniRef50_C6E953 Response regulator receiver modulated diguanylat... 601 e-170 UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 600 e-170 UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus... 600 e-170 UniRef50_A5IG24 Sensory box protein/GGDEF/EAL domains n=6 Tax=Le... 600 e-170 UniRef50_Q2BQ91 Multisensor diguanylate cyclase/phophodiesterase... 600 e-170 UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Ma... 600 e-170 UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica ... 600 e-170 UniRef50_Q1H236 Response regulator receiver modulated diguanylat... 600 e-170 UniRef50_A0YPT5 Serine/Threonine protein kinase and Signal Trans... 600 e-170 UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 600 e-170 UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillu... 599 e-169 UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromob... 599 e-169 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 598 e-169 UniRef50_C6X7M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodi... 598 e-169 UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 598 e-169 UniRef50_A6W3H5 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_A1SWE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_Q07XP4 Response regulator receiver modulated diguanylat... 598 e-169 UniRef50_B3E7H1 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 597 e-169 UniRef50_Q5ZVT3 Inner membrane protein PLUS sensory box protein ... 597 e-169 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 597 e-169 UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 T... 597 e-169 UniRef50_D1REK0 Putative response regulator, PAS/GGDEF/EAL domai... 597 e-169 UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF a... 597 e-169 UniRef50_Q21IJ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 597 e-169 UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 597 e-169 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 597 e-169 UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_A4BJS0 Predicted signal transduction protein containing... 597 e-169 UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-169 UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0... 596 e-168 UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 596 e-168 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 596 e-168 UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acineto... 595 e-168 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 595 e-168 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 595 e-168 UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuni... 595 e-168 UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_Q2BJI5 Regulatory component of sensory transduction sys... 595 e-168 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 595 e-168 UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_B8KPF2 Response regulator receiver modulated diguanylat... 594 e-168 UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Pho... 594 e-168 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 594 e-168 UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_A2SCH7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Me... 593 e-168 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 593 e-168 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_A3ESX6 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 593 e-168 UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YK... 593 e-168 UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenz... 593 e-168 UniRef50_C7RB28 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-167 UniRef50_C3X4C3 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-167 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-167 UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter... 592 e-167 UniRef50_Q7NXK6 Putative uncharacterized protein n=1 Tax=Chromob... 592 e-167 UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/P... 592 e-167 UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/P... 592 e-167 UniRef50_A0YED8 Putative diguanylate cyclase/phosphodiesterase (... 592 e-167 UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum... 592 e-167 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 592 e-167 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 591 e-167 UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/P... 591 e-167 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 591 e-167 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 591 e-167 UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (... 591 e-167 UniRef50_D1U433 Diguanylate cyclase/phosphodiesterase with PAS/P... 591 e-167 UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_C5D169 Diguanylate cyclase/phosphodiesterase with extra... 590 e-167 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 590 e-167 UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_C5T6Q1 Diguanylate cyclase/phosphodiesterase with extra... 590 e-167 UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 590 e-167 UniRef50_UPI0001C42794 probable signaling protein n=1 Tax=Bacill... 590 e-166 UniRef50_A8URG3 Signal transduction protein containing a membran... 590 e-166 UniRef50_Q984Y8 Mll7787 protein n=2 Tax=Mesorhizobium RepID=Q984... 589 e-166 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 589 e-166 UniRef50_Q0KC83 Predicted signal transduction protein containing... 589 e-166 UniRef50_A8UUX8 Preprotein translocase ATPase subunit n=1 Tax=Hy... 589 e-166 UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 589 e-166 UniRef50_A3WPN1 Signaling protein with a ligand-binding sensor d... 589 e-166 UniRef50_B9Z392 Response regulator receiver modulated diguanylat... 589 e-166 UniRef50_C5BN58 Predicted signal transduction protein, with PAS,... 588 e-166 UniRef50_A6FEH9 Sensory box protein n=1 Tax=Moritella sp. PE36 R... 588 e-166 UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/P... 588 e-166 UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Se... 588 e-166 UniRef50_C4ZNG3 Response regulator receiver modulated diguanylat... 588 e-166 UniRef50_Q2BRN8 Signal transduction protein containing membrane,... 588 e-166 UniRef50_UPI0001850D38 diguanylate cyclase/phosphodiesterase wit... 588 e-166 UniRef50_Q5P4J2 Putative uncharacterized protein n=1 Tax=Aromato... 588 e-166 UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 587 e-166 UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 587 e-166 UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF s... 587 e-166 UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/P... 587 e-166 UniRef50_Q07ZQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 587 e-166 UniRef50_B6BNN5 Ggef/eal/pas/pac-domain containing protein n=1 T... 587 e-166 UniRef50_Q21ZG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 587 e-166 UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/P... 587 e-166 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 587 e-166 UniRef50_Q0A8D0 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-166 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-166 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 586 e-166 UniRef50_Q1Q7M3 Similar to ScrC (Sensory box/GGDEF family protei... 586 e-165 UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 586 e-165 UniRef50_C6P797 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-165 UniRef50_C6BM04 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-165 UniRef50_A5V028 Response regulator receiver modulated diguanylat... 586 e-165 UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-165 UniRef50_A5UVR9 Response regulator receiver modulated diguanylat... 586 e-165 UniRef50_C1SL51 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 585 e-165 UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase wit... 585 e-165 UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepI... 585 e-165 UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 585 e-165 UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/P... 585 e-165 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 585 e-165 UniRef50_Q1NLX3 GGDEF:EAL n=2 Tax=delta proteobacterium MLMS-1 R... 585 e-165 UniRef50_A0LBX0 Diguanylate cyclase/phosphodiesterase with PAS/P... 585 e-165 UniRef50_A1WX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 585 e-165 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 585 e-165 UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas ... 584 e-165 UniRef50_B7KTR4 Diguanylate cyclase/phosphodiesterase with PAS/P... 584 e-165 UniRef50_B1WWM4 Putative uncharacterized protein n=2 Tax=Cyanoth... 584 e-165 UniRef50_A6LW88 Diguanylate cyclase/phosphodiesterase with PAS/P... 583 e-165 UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/P... 583 e-165 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 583 e-165 UniRef50_D2UCH8 Hypothetical two-component system sensor protein... 583 e-165 UniRef50_Q1YPY3 PAS:GGDEF protein n=1 Tax=gamma proteobacterium ... 583 e-165 UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Nep... 583 e-165 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 583 e-165 UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/P... 583 e-165 UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1... 583 e-165 UniRef50_A1K8Z7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 582 e-164 UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 ... 582 e-164 UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/P... 582 e-164 UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desu... 582 e-164 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 582 e-164 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 582 e-164 UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL ... 582 e-164 UniRef50_A9WJ06 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 581 e-164 UniRef50_Q1K260 Diguanylate cyclase/phosphodiesterase with PAS/P... 581 e-164 UniRef50_Q21VJ9 Response regulator receiver modulated diguanylat... 581 e-164 UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 581 e-164 UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/P... 581 e-164 UniRef50_Q2SDR7 Predicted signal transduction protein containing... 581 e-164 UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/P... 581 e-164 UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitrati... 580 e-164 UniRef50_Q2W5V0 Predicted signal transduction protein containing... 580 e-164 UniRef50_D1RFR0 Response regulator/GGDEF domain/EAL domain prote... 580 e-164 UniRef50_C3XA65 Diguanylate cyclase/phosphodiesterase with PAS/P... 579 e-163 UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacill... 579 e-163 UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GA... 579 e-163 UniRef50_A1TQ27 Periplasmic sensor diguanylate cyclase/phosphodi... 579 e-163 UniRef50_B0CBA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 579 e-163 UniRef50_A4VKH7 Sensory box/GGDEF family protein n=1 Tax=Pseudom... 578 e-163 UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_C6MQF9 Response regulator receiver modulated diguanylat... 578 e-163 UniRef50_C6WT76 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_C1AC92 Putative uncharacterized protein n=1 Tax=Gemmati... 578 e-163 UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative ... 578 e-163 UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ol... 578 e-163 UniRef50_A1WC44 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_B9ZLS8 Response regulator receiver modulated diguanylat... 578 e-163 UniRef50_Q1YK72 Putative sensory protein, diguanylate cyclase n=... 577 e-163 UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Me... 577 e-163 UniRef50_A6W0I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 577 e-163 UniRef50_A3YAL9 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 577 e-163 UniRef50_B4VXK2 Cyclic diguanylate phosphodiesterase (EAL) domai... 577 e-163 UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/P... 577 e-163 UniRef50_Q3A254 Periplasmic sensor diguanylate cyclase/phosphodi... 577 e-163 UniRef50_Q312J4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 577 e-163 UniRef50_A0YGV9 Putative uncharacterized protein n=1 Tax=marine ... 577 e-163 UniRef50_C4XMU6 GGDEF domain protein n=2 Tax=Desulfovibrio RepID... 576 e-163 UniRef50_Q8DHG0 Tlr1999 protein n=1 Tax=Thermosynechococcus elon... 576 e-163 UniRef50_B2J1V8 Response regulator receiver modulated diguanylat... 576 e-163 UniRef50_B1XWM7 Diguanylate cyclase/phosphodiesterase with PAS/P... 576 e-162 UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/P... 576 e-162 UniRef50_A3QBK2 Response regulator receiver modulated diguanylat... 576 e-162 UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 576 e-162 UniRef50_B8CTT8 Sensory box/GGDEF/EAL domain protein n=1 Tax=She... 575 e-162 UniRef50_B9Z647 Response regulator receiver modulated diguanylat... 575 e-162 UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 575 e-162 UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseu... 575 e-162 UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/P... 575 e-162 UniRef50_C7RKP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 575 e-162 UniRef50_A0YWR3 Putative uncharacterized protein n=1 Tax=Lyngbya... 574 e-162 UniRef50_C6BSB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 574 e-162 UniRef50_Q2BQB2 Sensory box protein n=1 Tax=Neptuniibacter caesa... 574 e-162 UniRef50_A8GZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 574 e-162 UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 574 e-162 UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/P... 574 e-162 UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine ... 574 e-162 UniRef50_C6XE67 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobact... 573 e-162 UniRef50_Q15PZ4 Response regulator receiver modulated diguanylat... 573 e-162 UniRef50_Q46PR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_C6XCZ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum s... 573 e-162 UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylo... 572 e-161 UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/P... 572 e-161 UniRef50_C8WTB0 Diguanylate cyclase/phosphodiesterase with PAS/P... 572 e-161 UniRef50_B9MF12 Diguanylate cyclase/phosphodiesterase with PAS/P... 572 e-161 UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Ta... 572 e-161 UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/P... 571 e-161 UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 571 e-161 UniRef50_A5IAE9 Sensory box protein, GGDEF family protein, LssE ... 571 e-161 UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 571 e-161 UniRef50_C6MGV8 Response regulator receiver modulated diguanylat... 571 e-161 UniRef50_B1ZLG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 571 e-161 UniRef50_D0J677 Diguanylate cyclase/phosphodiesterase n=2 Tax=Co... 571 e-161 UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=N... 571 e-161 UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Ta... 571 e-161 UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 571 e-161 UniRef50_Q3SJE6 Putative diguanylate cyclase/phosphodiesterase (... 571 e-161 UniRef50_Q3A5U6 Response regulator receiver modulated diguanylat... 571 e-161 UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 571 e-161 UniRef50_Q2N9U3 Sensory box/GGDEF family protein n=3 Tax=Sphingo... 570 e-161 UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya... 570 e-161 UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotole... 570 e-161 UniRef50_A2SJS2 Sensory box/response regulator n=3 Tax=Bacteria ... 570 e-161 UniRef50_C0GP21 Response regulator receiver modulated diguanylat... 570 e-161 UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 570 e-161 UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/P... 570 e-161 UniRef50_Q8DHT6 Tll1859 protein n=1 Tax=Thermosynechococcus elon... 570 e-160 UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 570 e-160 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 570 e-160 UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photoba... 569 e-160 UniRef50_C3KQA4 Putative uncharacterized protein n=1 Tax=Rhizobi... 569 e-160 UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 568 e-160 UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 568 e-160 UniRef50_B1KF16 Diguanylate cyclase/phosphodiesterase with PAS/P... 568 e-160 UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax... 568 e-160 UniRef50_C1I4R6 Diguanylate cyclase/phosphodiesterase domain 2 n... 568 e-160 UniRef50_B3E7G7 Diguanylate cyclase/phosphodiesterase with PAS/P... 568 e-160 UniRef50_Q3IEF5 Putative uncharacterized protein n=3 Tax=Alterom... 568 e-160 UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/P... 567 e-160 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 567 e-160 UniRef50_B8I783 Diguanylate cyclase/phosphodiesterase n=2 Tax=Cl... 567 e-160 UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 567 e-160 UniRef50_A0Q1B8 Diguanylate cyclase/phosphodiesterase domain 2 n... 567 e-160 UniRef50_Q31JB1 Response regulator receiver modulated diguanylat... 567 e-160 UniRef50_B3PF61 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 567 e-160 UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 566 e-160 UniRef50_A4X020 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 566 e-160 UniRef50_C7MR68 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 566 e-160 UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction ... 566 e-160 UniRef50_Q1NS23 PAS:GGDEF:EAL:Response regulator receiver n=4 Ta... 566 e-160 UniRef50_A9BVR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 566 e-159 UniRef50_Q2I6K9 Multidomain signal-transduction protein n=1 Tax=... 566 e-159 UniRef50_C6BS66 Diguanylate cyclase/phosphodiesterase with PAS/P... 565 e-159 UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax... 565 e-159 UniRef50_Q0AKC4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Hy... 565 e-159 UniRef50_C6QG37 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hy... 564 e-159 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 564 e-159 UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax... 564 e-159 UniRef50_B5ZH00 Response regulator receiver modulated diguanylat... 564 e-159 UniRef50_Q2RNE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 564 e-159 UniRef50_A4JQX8 Diguanylate cyclase/phosphodiesterase with PAS/P... 564 e-159 UniRef50_UPI0001698B39 diguanylate cyclase/phosphodiesterase wit... 564 e-159 UniRef50_A0YZ09 Putative uncharacterized protein n=1 Tax=Lyngbya... 564 e-159 UniRef50_A8FVX9 Signal transduction protein containing a membran... 564 e-159 UniRef50_C6AS31 Diguanylate cyclase/phosphodiesterase with PAS/P... 563 e-159 UniRef50_Q0A846 Diguanylate cyclase/phosphodiesterase with PAS/P... 563 e-159 UniRef50_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 563 e-159 UniRef50_A1WTF5 Diguanylate cyclase/phosphodiesterase with PAS/P... 563 e-158 UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Ar... 563 e-158 UniRef50_Q2BJL1 Signal transduction protein containing membrane,... 563 e-158 UniRef50_A3YI96 Sensory box/GGDEF family protein n=1 Tax=Marinom... 563 e-158 UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=B... 563 e-158 UniRef50_B9QV87 Putative uncharacterized protein n=1 Tax=Labrenz... 563 e-158 UniRef50_A7BZ46 Diguanylate cyclase/phosphodiesterase n=2 Tax=Be... 562 e-158 UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 562 e-158 UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromob... 562 e-158 UniRef50_B1J9N2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ps... 562 e-158 UniRef50_A2SIL3 Signal transduction protein n=1 Tax=Methylibium ... 562 e-158 UniRef50_B3PKS7 Diguanylate cyclase/phosphodiesterase domain 2 (... 562 e-158 UniRef50_D1U5D9 Response regulator receiver modulated diguanylat... 562 e-158 UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 68... 561 e-158 UniRef50_Q07T95 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 561 e-158 UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum... 561 e-158 UniRef50_Q7UTZ4 Putative uncharacterized protein n=1 Tax=Rhodopi... 561 e-158 UniRef50_Q0A9N6 Diguanylate cyclase/phosphodiesterase with PAS/P... 561 e-158 UniRef50_D2UAD2 Hypothetical c-di-gmp phosphodiesterase or signa... 561 e-158 UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF d... 561 e-158 UniRef50_Q48MD9 Sensory box protein/response regulator n=5 Tax=P... 561 e-158 UniRef50_Q0K510 Predicted signal transduction protein containing... 561 e-158 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 561 e-158 UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 561 e-158 UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 561 e-158 UniRef50_B1Y3L9 Response regulator receiver modulated diguanylat... 561 e-158 UniRef50_B8FI78 Response regulator receiver modulated diguanylat... 561 e-158 UniRef50_C1F295 Cyclic diguanylate phosphodiesterase/diguanylate... 561 e-158 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 561 e-158 UniRef50_B8DMV5 Diguanylate cyclase/phosphodiesterase with PAS/P... 561 e-158 UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 ... 561 e-158 UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protei... 561 e-158 UniRef50_B5WDA9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Bu... 561 e-158 UniRef50_C1CZG3 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 561 e-158 UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacilla... 561 e-158 UniRef50_A5EN18 Periplasmic sensor diguanylate cyclase/phosphodi... 561 e-158 UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Ma... 561 e-158 UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 560 e-158 UniRef50_A7BRN3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 560 e-158 UniRef50_A9KPL6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Cl... 560 e-158 UniRef50_Q3A5Q2 Response regulator receiver modulated diguanylat... 560 e-158 UniRef50_A6CKI1 Sensory box/GGDEF family protein n=1 Tax=Bacillu... 560 e-158 UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n... 560 e-158 UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Ta... 560 e-158 UniRef50_A3YH84 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 560 e-158 UniRef50_B3E3Z2 Diguanylate cyclase/phosphodiesterase with GAF s... 560 e-158 UniRef50_UPI0001C3140A diguanylate cyclase/phosphodiesterase wit... 560 e-157 UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwell... 560 e-157 UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/P... 560 e-157 UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 ... 559 e-157 UniRef50_Q72EZ6 Sensory box/GGDEF domain/EAL domain protein n=3 ... 559 e-157 UniRef50_A4ADN6 Sensory box EAL/GGDEF family protein (Fragment) ... 559 e-157 UniRef50_C5T9I2 Diguanylate cyclase/phosphodiesterase (Fragment)... 559 e-157 UniRef50_A6SXB0 Signal transduction protein n=2 Tax=Oxalobactera... 559 e-157 UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_B9ZM87 Diguanylate cyclase/phosphodiesterase with GAF s... 558 e-157 UniRef50_C4WM42 Diguanylate cyclase (GGDEF) domain-containing pr... 558 e-157 UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Bu... 558 e-157 UniRef50_D2LTE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_B8G486 Response regulator receiver modulated diguanylat... 558 e-157 UniRef50_B0U8J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_Q12T53 Periplasmic sensor diguanylate cyclase/phosphodi... 558 e-157 UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinib... 558 e-157 UniRef50_C5CLH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 557 e-157 UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/P... 557 e-157 UniRef50_Q9HYT3 Uncharacterized signaling protein PA3311 n=9 Tax... 557 e-157 UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/P... 557 e-157 UniRef50_Q1QZB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 556 e-157 UniRef50_C7QU84 Response regulator receiver modulated diguanylat... 556 e-157 UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain prote... 556 e-157 UniRef50_C9YEY1 Uncharacterized signaling protein CC_0091 n=1 Ta... 556 e-156 UniRef50_A4VMP6 Sensory box protein n=1 Tax=Pseudomonas stutzeri... 556 e-156 UniRef50_Q7NSJ7 Putative uncharacterized protein n=1 Tax=Chromob... 556 e-156 UniRef50_C6WUZ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 556 e-156 UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/P... 556 e-156 UniRef50_Q1YJA6 Putative diguanylate cyclase n=1 Tax=Aurantimona... 556 e-156 UniRef50_C5JAX8 Putative response regulator receiver n=1 Tax=unc... 556 e-156 UniRef50_C8R023 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 556 e-156 UniRef50_A0L6C9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 556 e-156 UniRef50_Q2RWS9 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_Q13IZ7 Putative diguanylate cyclase(GGDEF)/ phosphodies... 555 e-156 UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_B7JX23 Diguanylate cyclase/phosphodiesterase with Chase... 555 e-156 UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_Q8DKE8 Tlr0911 protein n=1 Tax=Thermosynechococcus elon... 555 e-156 UniRef50_C9YCS0 Uncharacterized signaling protein PA1727 n=1 Tax... 555 e-156 UniRef50_Q0AAF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 555 e-156 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 555 e-156 UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH 554 e-156 UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Sh... 554 e-156 UniRef50_C4ZM14 Response regulator receiver modulated diguanylat... 554 e-156 UniRef50_B6R1T0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 554 e-156 UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp... 554 e-156 UniRef50_B2JE89 Diguanylate cyclase/phosphodiesterase n=58 Tax=B... 554 e-156 UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 554 e-156 UniRef50_A4G2W5 Putative uncharacterized protein n=2 Tax=Hermini... 553 e-156 UniRef50_A4Y0T1 Diguanylate cyclase/phosphodiesterase with PAS/P... 553 e-156 UniRef50_B5VVW5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ar... 553 e-156 UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 553 e-156 UniRef50_B3PCW8 Sensory box/GGDEF domain/EAL domain protein n=1 ... 553 e-156 UniRef50_C8QI11 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 553 e-155 UniRef50_C5SQE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 553 e-155 UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 553 e-155 UniRef50_Q4ZXA9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 553 e-155 UniRef50_B0KTQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 553 e-155 UniRef50_Q0AIM6 Diguanylate cyclase/phosphodiesterase n=35 Tax=B... 553 e-155 UniRef50_A1U786 Periplasmic sensor diguanylate cyclase/phosphodi... 552 e-155 UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacill... 552 e-155 UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/P... 552 e-155 UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT 552 e-155 UniRef50_B1XK84 Two-component response regulator (ABC transporte... 552 e-155 UniRef50_A9CI56 GGDEF family protein n=5 Tax=Rhizobiales RepID=A... 552 e-155 UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 552 e-155 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 552 e-155 UniRef50_A4C531 Sensory box protein n=1 Tax=Pseudoalteromonas tu... 552 e-155 UniRef50_Q1K008 Diguanylate cyclase/phosphodiesterase with PAS/P... 551 e-155 UniRef50_A7K1J3 Sensory box/GGDEF family protein ScrC (Involved ... 551 e-155 UniRef50_C7LQB7 Diguanylate cyclase/phosphodiesterase n=2 Tax=De... 551 e-155 UniRef50_A4ADN7 Sensory box EAL/GGDEF family protein n=2 Tax=unc... 551 e-155 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 551 e-155 UniRef50_C7RTE0 Response regulator receiver modulated diguanylat... 551 e-155 UniRef50_C5V3A5 Diguanylate cyclase/phosphodiesterase with extra... 551 e-155 UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 551 e-155 UniRef50_Q31DJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_B3PF41 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 550 e-155 UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_Q3SL48 Putative diguanylate cyclase/phosphodiesterase (... 550 e-155 UniRef50_C9RXJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_Q1NX96 GGDEF:EAL:Response regulator receiver n=3 Tax=De... 550 e-154 UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-154 UniRef50_Q47VW2 GAF domain/GGDEF domain/EAL domain protein n=1 T... 549 e-154 UniRef50_C3MGT7 Putative diguanylate cyclase (GGDEF)/phosphodies... 549 e-154 UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythro... 549 e-154 UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinoco... 549 e-154 UniRef50_B2JAQ1 Diguanylate cyclase/phosphodiesterase n=1 Tax=No... 548 e-154 UniRef50_A6X3N7 Diguanylate cyclase/phosphodiesterase n=9 Tax=Pr... 548 e-154 UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 548 e-154 UniRef50_A6X5M4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rh... 548 e-154 UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 548 e-154 UniRef50_Q2G9J7 Diguanylate cyclase/phosphodiesterase with PAS/P... 548 e-154 UniRef50_B6R112 Putative uncharacterized protein n=1 Tax=Pseudov... 548 e-154 UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase... 548 e-154 UniRef50_Q1AWV6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 547 e-154 UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_C5SBC3 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_Q4ZPP9 GGDEF n=14 Tax=Pseudomonas RepID=Q4ZPP9_PSEU2 547 e-154 UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_C5SMP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_B8HQZ5 Diguanylate cyclase/phosphodiesterase with extra... 546 e-154 UniRef50_D2LY77 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 546 e-154 UniRef50_B1WWC9 Putative uncharacterized protein n=2 Tax=Cyanoth... 546 e-153 UniRef50_A6T0I9 Sensory box/GGDEF family protein n=1 Tax=Janthin... 546 e-153 UniRef50_Q5P8V8 Predicted response regulator receiver n=1 Tax=Ar... 546 e-153 UniRef50_A6D1R5 Predicted signal transduction protein containing... 546 e-153 UniRef50_UPI0001926D08 PREDICTED: hypothetical protein n=1 Tax=H... 546 e-153 UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 T... 546 e-153 UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 546 e-153 UniRef50_A4FDX2 PAS:GGDEF n=1 Tax=Saccharopolyspora erythraea NR... 546 e-153 UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepI... 546 e-153 UniRef50_A1U2V9 Periplasmic sensor diguanylate cyclase/phosphodi... 546 e-153 UniRef50_A3ITH6 Putative diguanylate cyclase/phosphodiesterase (... 546 e-153 UniRef50_A4BNI1 Putative signal transducer protein with histidin... 546 e-153 UniRef50_Q2SKH9 Predicted signal transduction protein containing... 545 e-153 UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/P... 545 e-153 UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 545 e-153 UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 544 e-153 UniRef50_Q2N9U4 Sensory box/GGDEF family protein n=5 Tax=Sphingo... 544 e-153 UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/P... 544 e-153 UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Le... 544 e-153 UniRef50_Q7CVL6 GGDEF family protein n=1 Tax=Agrobacterium tumef... 544 e-153 UniRef50_B7KEZ6 Response regulator receiver modulated diguanylat... 543 e-153 UniRef50_A5FVW4 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonen... 543 e-153 UniRef50_Q7UUK0 Putative uncharacterized protein n=1 Tax=Rhodopi... 543 e-152 UniRef50_Q2NCL2 Sensory box/GGDEF family protein n=2 Tax=Erythro... 543 e-152 UniRef50_A6Q7D0 Putative uncharacterized protein n=1 Tax=Sulfuro... 543 e-152 UniRef50_UPI000185131B diguanylate cyclase/phosphodiesterase wit... 542 e-152 UniRef50_Q2BRD7 Two-component response regulator n=1 Tax=Neptuni... 542 e-152 UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/P... 542 e-152 UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacill... 542 e-152 UniRef50_A0LAI5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 542 e-152 UniRef50_Q486I4 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 542 e-152 UniRef50_Q1QHQ7 Diguanylate cyclase/phosphodiesterase n=13 Tax=B... 542 e-152 UniRef50_B5ZG86 Diguanylate cyclase/phosphodiesterase with PAS/P... 542 e-152 UniRef50_C6CVN0 Diguanylate cyclase/phosphodiesterase with extra... 542 e-152 UniRef50_C9YG65 Uncharacterized signaling protein PA1727 n=1 Tax... 541 e-152 UniRef50_A6EZP7 Two-component response regulator n=4 Tax=Marinob... 541 e-152 UniRef50_B7L1R8 Diguanylate cyclase/phosphodiesterase with PAS/P... 541 e-152 UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 541 e-152 UniRef50_Q21XF0 Response regulator receiver modulated diguanylat... 541 e-152 UniRef50_Q2VZ50 Predicted signal transduction protein containing... 541 e-152 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 129/751 (17%), Positives = 258/751 (34%), Gaps = 73/751 (9%) Query: 17 AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNL 76 L + +S +A + + F+ ++ L+ ++ G + + C + + Sbjct: 87 PRHLHAFFPPVEHVLSGVATVIVAAAFMRYLTGDFFLARNYL-GIGITLTLSCYIATFSW 145 Query: 77 WNFHLS----------FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 W +++ + + +V + R + G Sbjct: 146 WADYITTNPASKFGQTWCDVLFHTIAALLLVFPTWHLFRHRTG----------------- 188 Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 WL + I ++ L + + IFT + + + L Y Sbjct: 189 WLRNI----ICFALVCFFLTETLKLVDIAYGERYEYIFTPIRRSFNLIGIYV---LGYVY 241 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R S RR A + EKR TL + + L+ GYL + Sbjct: 242 IREQESRR------RRATAKVVESEKRYRTLVENVNMG--ISLIDGNNRIVMNNGYLEKM 293 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLL----------NYNQNFLQGVETEYSLAFILA 296 F G+ Y CL + + L Sbjct: 294 FRKNAEKLTGRFCYQEFENRDECCDNCLGVEAMTTGRAVSREVERILDDGEPSGLRLSAF 353 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + +V + + A D LT LPN + Sbjct: 354 PVFNEQGKATKFIKVVEDITDRKRAEEKIRRLAYYDSLTGLPNRPLMMDRLSQAIRHARR 413 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ G + ++ + L +E++ L +L G E +++ Sbjct: 414 HGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAARLSGCTRESDTLARLGGDEFVIIA 473 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G + + + + + L + F + + LL + Sbjct: 474 PGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIGIVLFPSDGGNGEMLLQRADMAM 533 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 + + ++ + ++ L +R AL G+ L QP N + G Sbjct: 534 YAAKDRGGN-SYRFFSAEMNTRAVERHELEEDMRQALTNGEFFLMYQPQVNTGTWKVVGV 592 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + ++ G++ P +F+P+ + ++ VLE + A D + VN Sbjct: 593 EALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEACRQGAQWQHDGLPPLQMGVN 652 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L + I G + + ++ + + + +E+TE ++E+++ + QL G R+A Sbjct: 653 LCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLM-DSETAVSTLGQLKALGVRLA 711 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY+++ LK D IKID F++DI + + I+ +I +A++ V+AE Sbjct: 712 IDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVAVARSLGPEVLAEG 771 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET++Q L + +QG+ RP D Sbjct: 772 VETEEQLRYLMSITCADIQGFYFSRPLLPDD 802 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 728 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 124/597 (20%), Positives = 210/597 (35%), Gaps = 21/597 (3%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 D KI + DA F L + L +L+ L + +R I+ Sbjct: 260 VDMRRKIYSQGVDAVQYFLFCFLGFCLISSLTGYILYAKLLASRKERKDTEKRYRSVISQ 319 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + S + L Y D + GV L Sbjct: 320 ASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTLYDIMEDDRSGVDWRINRIL--- 376 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + L + G E L L V + ++R + A Sbjct: 377 -SEKVCFLGEHTVRAEDGSMVEVDLNANL-VSYGEQQVICMVLRDISERKRFEGELMHMA 434 Query: 327 LTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN Q + L +D + ++ G ++ Sbjct: 435 HHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGHHTGDMLLKE 494 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDM 435 + L ++++ + + +L G E +++ T + + S + + Sbjct: 495 VADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSAPFRLEKHEMFI 554 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + +T + LL + E ++ + ++++ + + Sbjct: 555 TASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRN-TYQFFSEEMNSRVSERLSMETGL 613 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL + + LL+ QP N G + ++ + G++ PD F+PL + L Sbjct: 614 RHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPIG 673 Query: 553 LQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + R SVN+ N+ I + + + P + LEI Sbjct: 674 EWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELEI 733 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N E ++ + +L + G IAIDDFGTGY++ LKRL ADI+KID FV I Sbjct: 734 TESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGIP 793 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 N D +V +I +L L +VAE VE Q+Q L + Q +QGY +P P Sbjct: 794 GNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAE 850 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 100/523 (19%), Positives = 195/523 (37%), Gaps = 23/523 (4%) Query: 229 LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 ++ + I GY V F G + + L A + + Sbjct: 357 IIYVNPAFERITGYGVDEVIDKNPRFLRGDDRDQAELKKLVQAFKEEREGCFVLRNYRKD 416 Query: 286 ETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + +A + + ++ + QA DPLT LPN L+ Sbjct: 417 GSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQLVYQATHDPLTGLPNRNLLQD 476 Query: 343 AP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + L +DN + ++ G + ++++ L ++ + + Sbjct: 477 RLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTV 536 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E ++VL + + + + + + + F + ET Sbjct: 537 ARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGET 596 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL + ++ + +++ L ++ A+ + LL+ QP Sbjct: 597 VDALLKNADAAMYHAKEQGKN-NYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQP 655 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + ++ + G+++P KF+PL + L VL + Sbjct: 656 RVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQ 715 Query: 568 CDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 R +VNL Q+N+ + + ++PQ + LE+TE AE S Sbjct: 716 DAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAI 775 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + +L G +AIDDFGTGY++ LKR +KID F++D+ + DA +V++I + Sbjct: 776 LRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITM 835 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A + +AE VE +Q L + + +QGY RP + Sbjct: 836 AHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEE 878 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 124/728 (17%), Positives = 261/728 (35%), Gaps = 67/728 (9%) Query: 28 SRFISPLAIIHSSYIFLAWMPLC-VMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 +R + +I + + + + +M++ + ++ W ++ T + F Sbjct: 107 TRVVKGSVVIGTGIAGMHYTGMAAMMMNAVILYDW---------LWFTVSIFVAILFSMV 157 Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 A++L Q V + WR + + + + + Sbjct: 158 ALILTFQLRSVDPVEGL--------WRKIFAGLLMGASITGMHYTGMYATTFVAHEHMTI 209 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI-------- 198 P S I +V+ L+ +V + R++ S + Sbjct: 210 AVIPYDDSGLIATMIGIVSVLILVVTLASVYVDKQFAGKTLRVLESDQRYKSLFEHNYDG 269 Query: 199 --LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + D S+ + L +C + + I+ + Sbjct: 270 VIFYSIDGTQSVMNPAAMRLTKEQSLPLEKLKTMCISTDAELISTH-------------- 315 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE 316 F N + C + G + ++ + + +VR + Sbjct: 316 -----FTNAVQGDARNCDITLTTRE--GCQLHLNMTHTPVFVDQQITGVFMIVRDITNKK 368 Query: 317 WLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYG 368 + + A D LT LPN R + +A + + L +D+ + ++ G Sbjct: 369 EYEAKINYLAFHDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVYVLFLDLDHFKLVNDSLG 428 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 ++ L + + +Y+L G E +++L+ TE + M N +N + Sbjct: 429 HDFGDLLLQEASLRLRECVGKKGTVYRLGGDEFMVILTDV-TEREVSSMANEINETIEQA 487 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + L + R+ + + L+ + + + Sbjct: 488 FFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAKDKGKN-SFHLYVPNLEQAV 546 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ + N + AL + + LL+ QP + + G + ++ + G++ PD+F+ + Sbjct: 547 NDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFISVA 606 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL + K R +VNL L+++ I + + Sbjct: 607 EETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQTR 666 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++P+ + LEITE + + +++L + G +AIDDFGTGY++ LK + +K Sbjct: 667 LAPEYLELEITESSMI-DVHRATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLK 725 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D++ + IV +I +A + V+AE VET+++ A L + + +QGYL Sbjct: 726 IDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLF 785 Query: 722 GRPQPLAD 729 RP P D Sbjct: 786 SRPLPSED 793 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 96/453 (21%), Positives = 182/453 (40%), Gaps = 16/453 (3%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 A + ++ + + + + + A D LT LPN Sbjct: 482 AQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQA 541 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +D+ + ++ G + ++ I + L+++ + + ++ G E + Sbjct: 542 HRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTI 601 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L + + + + N + + + + LL Sbjct: 602 LLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADA 661 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 Q+ ++ QT ++ L N +R ALD+ + ++Y QP + Sbjct: 662 AMYQAKEMGRN-NYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIV 720 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 G + ++ G+++P +F+P+ + L +L R + Sbjct: 721 GVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVT 780 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL LQ ++ I + + + PQ + LEITE A + + + +L K G Sbjct: 781 VNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGIT 840 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ LKRL DI+KID F+ D+ T + D I+ +I L + VVA Sbjct: 841 LAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVA 900 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L + +QGYL +P P+ + Sbjct: 901 EGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRE 933 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 115/640 (17%), Positives = 232/640 (36%), Gaps = 37/640 (5%) Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLK---ISTFFGDADAIFTVVDLLSLFT 174 + R++++ ++ +++ I+ + +L++L Sbjct: 269 APLKTNRIYFITVMAVGTSVTLLFVWFLMQRLTSPLSLITRHVEAIPDKSGLHNLINLER 328 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LL 229 + +I + + + + E L+ A + + L Sbjct: 329 KDELGT--------LINAFNSMILSLDQHQNALRESESNFRALADNANDGLQIITDSSHL 380 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN----YNQNFLQGV 285 I GY V + + + + + T + Sbjct: 381 AYVNKRAAEIVGYSVEEMLLTTIETIIHPDHLQMIIERKAKTDAGEFVPKQFEIMLAHRN 440 Query: 286 ETEYSLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + A I + L +VR + A D LT LPN L+ Sbjct: 441 GSCVPVEVTTARTIWQGKQVELAIVRDITDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRL 500 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + L +D + ++ G + + ++ L ++E + + ++ Sbjct: 501 GQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLTECVRETDTVARI 560 Query: 397 PGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E ++++S E L + + S+ + N+ + + + + +Q Sbjct: 561 GGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQG 620 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL ++ A ++ Q + ++L N++R AL++ + +++ QP + Sbjct: 621 LLKNADLAMYKAKDQGKN-AFQYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQMD 679 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 G + ++ D G++ P +F+P+ + L L++ Sbjct: 680 LKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAG 739 Query: 571 K-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 R +VNL + QK I + K+ ++P + LE+TE S AE S + + Sbjct: 740 FMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHK 799 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G +AIDDFGTGY++ LK + +KID F++D+ N D IV +I +A Sbjct: 800 LKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHN 859 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L V AE VE Q L +QGYL+ P P A+ Sbjct: 860 LNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAE 899 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 709 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 104/570 (18%), Positives = 210/570 (36%), Gaps = 46/570 (8%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV- 255 ++ E+R + A V Y+ + Y P F +F + Sbjct: 301 ITERKQAEEALRKSEERYRIVLESAPDPV------VVYDTEGKVAYFNPAFSRVFGWTLD 354 Query: 256 ----GKLRYPFLNLTWAVSTL--------CLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + + + L L + + A Sbjct: 355 ESIGRNIDFLPVENVPENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHD 414 Query: 304 CL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------------- 346 L + ++ + A D LT L N ++ E Sbjct: 415 KLQGSIITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRR 474 Query: 347 --EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D ++++ G + ++ + L +++++ +++L G E ++ Sbjct: 475 IKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTII 534 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ + + + + +R + L + + + + ++ L+ Sbjct: 535 LNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIA 594 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGY 519 + E ++ +T ++++L N +R AL L++Y QP+ + + G Sbjct: 595 MYAAKEE--NQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVDSTNQIVGM 652 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVN 578 + +L + G+++P +F+PL + L VL + +VN Sbjct: 653 EALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVN 712 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L + ++ I ++ + + P + LE+TE + E ++ ++ L G + Sbjct: 713 LSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFS 772 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D +KID FV D TN D I+++I +A+ + VAE Sbjct: 773 IDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEG 832 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VE ++QQ L G +QGY GRP P Sbjct: 833 VEAKEQQDFLIHHGCHMMQGYYFGRPMPAE 862 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 113/558 (20%), Positives = 211/558 (37%), Gaps = 26/558 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPVFFII 250 ++ E+R L A V+ LL +P + Sbjct: 388 ISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKA 447 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE-YSLAFILAVLISFSV---CLL 306 + +Y + +L + + L + + S ++ Sbjct: 448 LLPVIMLPEQLATAAGMEQMICSDTSYYREYLSPTREGKRWIGWALRCIFNQSGQAEAII 507 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 M R + A DP+T LPN L G + L +D Sbjct: 508 GMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLD 567 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G M +R + LL ++ ++ + +L G E ++++S + + + +V Sbjct: 568 RFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVV 627 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + ++ + F + + LL Q+ Sbjct: 628 MKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTC-H 686 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 ++ + T+++LL +T+R AL++ + L QP + G + +L D G+ Sbjct: 687 FFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGV 746 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P+ F+P+ + L VL + + R +VN+ Q+N+ Sbjct: 747 VPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGL 806 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI ++ + P + LE+TE N E ++ + QL K G ++IDDFGTGY++ Sbjct: 807 RIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSH 866 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK D +KID FVK + + DA I +I LA + L+VVAE +E +Q +H+ Sbjct: 867 LKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQR 926 Query: 712 GVQYLQGYLIGRPQPLAD 729 +QGY + RP + Sbjct: 927 HCDTMQGYYLSRPVTAEE 944 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 111/501 (22%), Positives = 212/501 (42%), Gaps = 25/501 (4%) Query: 252 TLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLY 307 L G+ F + W A++T + + Y + + + Sbjct: 382 LLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTVTAVKDRNGMVTNYVG 441 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDN 359 ++ + + + A DPLT LPN R L +Q + + +DN Sbjct: 442 VLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFIDLDN 501 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-----PETEGRL 414 + ++ YG M ++ + + L+ +++ + + + G E +++L G + + Sbjct: 502 FKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPLDAASQA 561 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + F+ Q+++ L+ Q Q+ Sbjct: 562 ETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGRN 621 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYD 529 + L + + K+ L +R A++ L+ Q + + G + ++ + Sbjct: 622 V-LRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVDESRHPFGAEALIRWFHPE 680 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQK 587 G+++PD+F+PL + +L VLE+ + G SVN+ Q Sbjct: 681 HGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQT 740 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ L ++Y I+P + LE+TE N E ++ + L + G + ++DDFGTGY+ Sbjct: 741 DFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYS 800 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + + LKRL D +KID FV+DI + D IVR+I +A + L V+AE VET++QQ Sbjct: 801 SLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKH 860 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G + QGYL G+P P+ Sbjct: 861 LSSKGCKNFQGYLFGKPVPIE 881 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 704 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 97/486 (19%), Positives = 192/486 (39%), Gaps = 19/486 (3%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWL 318 + A+ L + + + + A ++ + + +V + Sbjct: 463 LEVIRVALCELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDITERKRY 522 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + Q+ D LT LPN L + + + +D+ +F++ G Sbjct: 523 EEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHD 582 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH 427 M ++ R L ++ + + + G E ++VLS + + R Sbjct: 583 MGDKLLQIAARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQ 642 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 L + + + Q LL ++ ++ Sbjct: 643 IGEHELVVSCSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRN-NFQFYTGDLNDIVLA 701 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ + +R AL++ + L++ QP + G + ++ + G ++P F+PL + Sbjct: 702 RLTMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEE 761 Query: 545 FNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL + D +VNL P Q+++A + R+ + ++ Sbjct: 762 TGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLA 821 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + LE+ E + + ++ ++ L + G ++ +DDFGTGY++ LKR D++KID Sbjct: 822 PRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKID 881 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV+DI + A IVR++ LA +L VVAE +ET+ Q L L +QG+ R Sbjct: 882 QSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSR 941 Query: 724 PQPLAD 729 P P A+ Sbjct: 942 PVPAAE 947 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 116/633 (18%), Positives = 231/633 (36%), Gaps = 34/633 (5%) Query: 122 WQRLFWLGLVTPIGIKCS-------MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 + WL ++ + G+F D L DA+ + T + ++SL Sbjct: 6 AINMIWLAILLAFVYWFLEPTIYAFVLQKGTFTDKWLH-----PDAEELRTRMSVVSLLL 60 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS--VLLLLLCT 232 L L R Q ++ T+ ++S + + Sbjct: 61 --LFGVYAQTMLKRQQQIMESLQASKQKIRQIIDTANDAFITIDAEGSISDWNPMAEMIF 118 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + D G + + + + + L E+ Sbjct: 119 GWPEDLAIGKSMMDLIMNQAPRNALIDDIQEFINTGSAPFTQGQIVITALHRDGHEFPAE 178 Query: 293 FILAVLISFSVCLLYMV-RIYHRSEWLNRRWHLQALTDPLTLLPNF----RALEQ----A 343 ++ + + + R + + + A D LT L N L++ A Sbjct: 179 MSISPQAVGASFIFNIFVRDISQRKADEEKLETLATRDELTGLINRFSYNHLLKKEVALA 238 Query: 344 PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G + +R L ++E++ + ++ G E L+ Sbjct: 239 KRHMESLAVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRESDTVARIGGDEFLI 298 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 ++ G + + + + + + +G + + + ++ L+ Sbjct: 299 IMPGIKDVHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADT 358 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 Q+ A + + K++ + +R A+++ L QP + Sbjct: 359 AMYQAKDSGRN-AYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRIL 417 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRF 575 G + +L + G ++P F+ LI NL VL+ K R Sbjct: 418 GVEALLRWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRM 477 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN Q ++ + + ++ ++ + + LEITE A ++ E ++ ++ L + G Sbjct: 478 AVNFAARQFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGV 537 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 IAIDDFGTG+++ LKR DI+KID F+ +I DA IV +I+++A + + V+ Sbjct: 538 SIAIDDFGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVI 597 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET+ Q L G +QGYL RP P Sbjct: 598 AEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPE 630 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 98/498 (19%), Positives = 195/498 (39%), Gaps = 19/498 (3%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 I F G + L + + + +A + + Sbjct: 439 IGFLWGKDWEQPGIEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPVKDDTGEVSHF 498 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRI 357 + + ++ Q D LT L N L Q + + + Sbjct: 499 VVALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDL 558 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D +F++ G +++I L +++ + + ++ G E +L+L G + Sbjct: 559 DRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDAGLSTGI 618 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + ++ + + + + T + L+ ++ Sbjct: 619 VQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRN-NF 677 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 ++ + +++ L +R A+++G+ +L+ QP + + G + ++ + G Sbjct: 678 QFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELG 737 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIA 590 ++ P +F+ L + L V+ + G R SVNL Q+++ Sbjct: 738 MIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLL 797 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + + PQ + +E+TE ++ + ++ + +L G +++IDDFGTGY++ Sbjct: 798 ESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLS 857 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D++KID FV DI T+ DA IV SI LA + L+V+AE VET++Q A L + Sbjct: 858 YLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQ 917 Query: 711 LGVQYLQGYLIGRPQPLA 728 +QGY RP Sbjct: 918 HDCDQIQGYFFSRPITAD 935 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 114/555 (20%), Positives = 206/555 (37%), Gaps = 24/555 (4%) Query: 198 ILWRRDI---APSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 + WRR + E+R + ++LLL D V + F L Sbjct: 301 LFWRRLLESLQQGRRSEERNRLVVERTNQAILLLEPGAGTIIDANPATCVLLGFSRNELT 360 Query: 255 VGKLRYPFLNLTWAV----STLCLLNYNQNFLQGVETEYSLAFILAVLISFS-VCLLYMV 309 + V + E + + + L M Sbjct: 361 GADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVEAMATQVPHGDDQALCLMF 420 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 QA D LT LPN LE + + +DN + Sbjct: 421 HDITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFK 480 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV--- 418 ++ G +RS+ + ++ + +L G E ++VL+ + Sbjct: 481 VVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDDAVTVAESF 540 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L + + + F + +T++ L+ + + Sbjct: 541 RNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRN-SFQFFA 599 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 E ++ + ++ + +R AL++G++LL+ QP G + ++ D G+++P Sbjct: 600 EEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISP 659 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRII 594 F+P+ L VL + R SVN+ + + R++ Sbjct: 660 ADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVV 719 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 R+ ++ +SP V LE+TE N + ++ + +L + G I+IDDFGTGY++ LKR Sbjct: 720 RIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKR 779 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D++KID F+ D+V DA IV +I +A + VVAE VET +Q LL + + Sbjct: 780 FPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCE 839 Query: 715 YLQGYLIGRPQPLAD 729 +QG+ RP P + Sbjct: 840 EIQGFYFSRPLPPEE 854 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 107/528 (20%), Positives = 200/528 (37%), Gaps = 21/528 (3%) Query: 221 AALSVLLLLLCTPYENDFIAGYLV-PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 L+ + T + + G + VF I+ P T+ L + Sbjct: 286 VTYLNLVAEMMTGWPREAAIGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLAA-DS 344 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + E ++ A + + + + S + + A D LT LPN Sbjct: 345 ILIHRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDVSESRAMALKMAHLAQHDFLTGLPN 404 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L + L +D + ++ G + ++ + L+ ++ Sbjct: 405 RALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIR 464 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 + + + + G E +++L+ E + L + L + + Sbjct: 465 DTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYP 524 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + ++ + A+ ++ + +++ + +R AL QG+ + Sbjct: 525 DDGMDADTVMKNADTAMYHAKANGRN-NYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFM 583 Query: 506 LYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + G + ++ + G++ P +F+P+ + L VL + Sbjct: 584 LYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQ 643 Query: 563 LATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + SVN+ + K+ + + K + P + LE+TE +AE Sbjct: 644 VRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAE 703 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 SS +E L G ++AIDDFGTGY++ LKR + +KID FV DI + DA IV Sbjct: 704 SSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVG 763 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ + K VVAE VET++Q A L L QG+L GRP P + Sbjct: 764 AMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADE 811 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 100/469 (21%), Positives = 189/469 (40%), Gaps = 23/469 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ ++ + + R + A D LT LPN Sbjct: 351 RKNGEVYPKWLSISAVVGTNGRVSHYIGTHNDITERKKAEERINALAFFDQLTGLPNRTL 410 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L ++ + + +DN + ++ G + ++ + L +++ + Sbjct: 411 LLDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGD 470 Query: 392 KLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 + +L G E ++VL+ E + + + + + + Sbjct: 471 TVARLGGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATL 530 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F G + L+ Q ++ A A+ + + + + + + AL + Sbjct: 531 FKGPLIPIDDLMKQADLSMYKAKAAGRN-AVRFFDPSMEIAVKVRAEMEDDLLRALAEKQ 589 Query: 504 LLLYAQPI-RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LL+ Q + G + +L G+++P +F+PL + L VLE+ Sbjct: 590 FLLHYQAQMVGERLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQ 649 Query: 563 LATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 LA + +VN+ Q + +++ + ++ +PQ + LE+TE N Sbjct: 650 LAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENV 709 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E + + L G ++DDFGTGY++ LKRL D +KID FV+D++T++ DA I Sbjct: 710 EDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIA 769 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 R+I LA + L V+AE VET+ Q+ L G QGY RP P+ D Sbjct: 770 RTIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIED 818 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 99/514 (19%), Positives = 196/514 (38%), Gaps = 20/514 (3%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + L+ VF I+ + P + L N+ + EY++ Sbjct: 228 SNAEAQGKPLLEVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHTA-LIGRHGNEYAIED 286 Query: 294 ILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 A + +L + + + + A D LT LPN L Sbjct: 287 SAAPIRDQDGNVLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALTI 346 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + L +D+ + ++ G + ++ + R L ++ ++ + + G E + Sbjct: 347 ARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEFM 406 Query: 403 LVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L + L + + + + F + E + L Sbjct: 407 ILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNAD 466 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 + + ++ + + L + +R A+++ + +LY QP + + Sbjct: 467 AAMYHAKSLGRN-NYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQV 525 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRF 575 G + ++ G++ PD+F+P+ L L V+ + Sbjct: 526 VGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPV 585 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL + L Q N + + + P + LE+TE A + + +L G Sbjct: 586 AVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGV 645 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++A+DDFGTGY++ LKRL + +KID F++DI T+ DA I+ +I ++ L+V+ Sbjct: 646 KLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVI 705 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VE Q L K G +QG++ RP P + Sbjct: 706 AEGVENINQLEFLKKEGCDQMQGFIASRPVPADE 739 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 116/612 (18%), Positives = 223/612 (36%), Gaps = 42/612 (6%) Query: 147 FDFPLKISTFFGDADAIFTV-----VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 D ++ G D I T D++ T VL L + + + Sbjct: 14 LDLWIRRLLTMGAPDLIDTALCDGACDIVRAETGVLTAINRQAGLLTFTAASGAWNQMMK 73 Query: 202 RDIAPSLGKEKRAFTLSWLAALSV-LLLLLC-----TPYENDFIAGYLVPVF---FIIFT 252 P A + L V L L C + LVP+F + Sbjct: 74 GVTVPLRNGNICAALAACGTPLRVDRLSLFCRESCELFQVVEMNTALLVPIFDEGRVAAC 133 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIY 312 + ++ PF + L ++ + + ++ + Sbjct: 134 IAAFRMDKPFDQV--DEQLLQQYAHSASAVLRN---------FRLMEDLRRHAAMLEEEV 182 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMS 364 R A D LT LPN R + + L +D + ++ Sbjct: 183 AERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKLIN 242 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 G + + ++ + L + E + + + G E ++ LS + + Sbjct: 243 DTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQKIID 302 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + L + + + + L+ ++ Sbjct: 303 VFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNC-QLFAPE 361 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 ++ + +++ L N +R AL++ + +L+ QP N + + ++ G++ P + Sbjct: 362 MNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSR 421 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L VL + + + +VNL P L Q +++ + R+ Sbjct: 422 FIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARV 481 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++P +++E+TE +AE ++ +L + G RI+IDDFGTGY++ LK+ Sbjct: 482 LAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFP 541 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID FV++I +N D I ++ +AK +L VVAE VET +Q +L L +Y+ Sbjct: 542 VHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYM 601 Query: 717 QGYLIGRPQPLA 728 QG+L P P Sbjct: 602 QGFLFSEPAPAE 613 >UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDT9_TOLAT Length = 753 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 138/711 (19%), Positives = 256/711 (36%), Gaps = 63/711 (8%) Query: 50 CVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLG 109 +LS+ +FG ++ + + L +G T V+ + Sbjct: 65 SAILSMAGLFG----GALVATIAGVIAGVYRLWLGGATYGVGILTIVISVILGLAYRAAH 120 Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 R + L+ + + ++ L+ S F FP+ + +F +TV Sbjct: 121 QRGWMSKGPIQL--------LLFGVLLHTAILLLFSLFPFPI-LHSFMQQIALPYTV--- 168 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 + + ML + + I++ + E R + ++++ Sbjct: 169 -----SFALATMLLGLMLQDIINRT-------KTEQALQDSESRLRAIVQAIPDLMVIID 216 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 Y + F+ +G + L A L + + Q EY Sbjct: 217 EDGHYLDALPT--TNNQFYPRALALIGSNLHSELPPETADRILATVRDSLRLQQTQTIEY 274 Query: 290 SLAFIL--------AVLISFSVC----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 F + A + ++V ++++ R + A DPLT LPN Sbjct: 275 ERDFKMGQRLVEGRAQPLGYTVNNKQVVIFLARDITDRKIKEDEIAWLAFYDPLTGLPNR 334 Query: 338 RALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 R L+ + + +DN + ++ G ++ + L ++E Sbjct: 335 RLLQDRLHQAMAGSKRSGQRAALLFIDLDNFKTLNDTLGHDKGDLLLQQVATRLFECVRE 394 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--------NSRQIHWNNTGLDMGYGAAW 441 + + +L G E +++L L + + + + Sbjct: 395 CDTVARLGGDEFVVMLEELNHSEELAAAQSKMVGEKILVKLCQPYLIAGYEHNSSASIGI 454 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F +QE+ L+ + Q+ + L + + T + L N +R L Q Sbjct: 455 TLFLAHQESSDELMKRADIAMYQAKSAGRN-TLRFFDNKMQAIVTSRAELENDLREGLRQ 513 Query: 502 GDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 LLL+ QP + G + ++ G+++P F+PL + L VL Sbjct: 514 QQLLLHYQPQVDVHGRIIGAEALVRWQHPSRGMVSPAHFIPLAEESGLILSLGDWVLNEA 573 Query: 560 LKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + L +VN+ + Q + +++ + P + LE+TE Sbjct: 574 CRQLRRWAAQPAMAHLTMAVNISARQIHQPDFVDQVLAAIHTAGVQPYHLKLELTESLLL 633 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 + E + + L G ++DDFGTGY++ LKRL D +KID FV D++T+ DA Sbjct: 634 EDTEEIILKMTALKACGVGFSLDDFGTGYSSLAYLKRLPLDQLKIDKSFVHDLLTDPNDA 693 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I SI LA++ L+V+AE VET+ Q+ L LG QGYL G P P Sbjct: 694 AIASSIITLAQSLGLNVIAEGVETEAQRQRLEALGCYTYQGYLFGHPVPAD 744 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 91/445 (20%), Positives = 181/445 (40%), Gaps = 16/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKS 351 ++ L+ + R + + A D LT LPN A+E A + + Sbjct: 128 GKTIGLVGIGRDITERKQSEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLA 187 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + ++ ++ ++ + +L G E +++L E+ Sbjct: 188 VLFIDLDRFKNINDTLGHDAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILLPELESH 247 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + S + + + + + + E Q L+ ++ Sbjct: 248 DQAARVAQKILSAAIQPLDVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEE 307 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + ++ ++++L N +R AL++ + L+ Q RN + G + ++ Sbjct: 308 GKN-NYQFYSPDLKVRSLERLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRW 366 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 + G ++P F+PL + L VL + +VNL Sbjct: 367 QHPELGTISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQF 426 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 N+ I + ++P+ + +EITE +AE ++ + + G R+AIDDFG Sbjct: 427 FDDNLINDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGV 486 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ +KR D +K+D F++DI N D I +I + K SL+V+AE VETQ+Q Sbjct: 487 GYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQ 546 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L QGY +P + Sbjct: 547 ENFLRDSACDQTQGYYFSKPVSPEE 571 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 108/566 (19%), Positives = 203/566 (35%), Gaps = 35/566 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSV---------------LLLLLCTPYENDFIAG 241 R A + E++ L+ + + L ++ I Sbjct: 421 DAERARLAAAIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGYAPHELIDA 480 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYSLAFILAV-- 297 + + + + + L + + + Sbjct: 481 PIERLLKPEYVAEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWAEVVTTLGL 540 Query: 298 -LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEA 348 S V + R A D LT LPN ++ + Sbjct: 541 NRRSGRVEFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRG 600 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + +D+ + ++ G + + R L +++ + + +L G E + +L Sbjct: 601 QLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVFLLPDT 660 Query: 409 ETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + EG + +L + + + ++ L + + + L Q+ Sbjct: 661 DAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAK 720 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 E + ++T+ +LL N +R ALD+G L+ QP + G + +L Sbjct: 721 REGRN-GFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALL 779 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPL 582 + G ++P +F+P+ L A+ VL + + +VNL Sbjct: 780 RWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAA 839 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 N+ + ++ + + P V LE+TE A + +S++ ++ L G R++IDDF Sbjct: 840 QFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDF 899 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR + +KID FV+DI + D IV +I LA + + VAE VET Sbjct: 900 GTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETL 959 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q L + G +QGY RP P Sbjct: 960 DQLDFLRQQGCDTVQGYYFSRPLPAE 985 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 125/647 (19%), Positives = 247/647 (38%), Gaps = 33/647 (5%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + R F + + + + ++G L S F I ++ Sbjct: 277 YADPRPNHDVCRNFGMKGLFMLPLVSMGEVLGQISVVNLGDSNFSYSEGQIQLSQSIVDA 336 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 + L + +I +++ + + ++ L S + Sbjct: 337 TASTLSNLLYMEKQEVIIEERTSEITFKNKELERVITELQQLSREKELILNSAGEGIFGL 396 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS-------------TLCLLNYNQ 279 + + + + + + P + + L + + Sbjct: 397 DLDGNITFCNPAGASMLGYDIKNELIGKPSSMVFNGIEKGKKKQVASGCDEDWNLYDKTE 456 Query: 280 NFLQGVETEYSLAFILAVLISFSVCL--LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 F + ++ + + ++++ + + + + + + + + A D LT LPN Sbjct: 457 QFFRKDQSSFPVEYVISSIKEGTEIVGEVITFKDVTQRKQMEEEIKYHAYFDSLTDLPNR 516 Query: 338 RALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L+ Q + L +D +F++ G +R + L + + Sbjct: 517 VLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPK 576 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 + + + G E + L ++E + +VN + SR H + + M F Sbjct: 577 SATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPD 636 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 N +T + L+ +S + E + +T + + L N + AL+Q +L++ Sbjct: 637 NGDTTEILVKNADTAMYKSKEISG-SSYHFFSEGMDTRTFESIKLENDLYKALEQEELVI 695 Query: 507 YAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QP N + EG + ++ + G++ PDKF+P+ + L VL+ + L Sbjct: 696 YYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQL 755 Query: 564 ATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 SVNL L Q ++ + + + +SP+ + LE+TE N ES Sbjct: 756 KKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTES 815 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ +++L G +AIDDFGTGY++ LK+L +KID FV+D+ + DA I + Sbjct: 816 TLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD--DAAITNT 873 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I LAK +L V+AE VET++Q L +QGY RP D Sbjct: 874 IITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAED 920 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 89/461 (19%), Positives = 177/461 (38%), Gaps = 19/461 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + R A D LT LPN Sbjct: 642 RKSGESYPEWLSISQVADAKGSVQNYVAVFTDITQRKLSEERLQFLANHDALTHLPNRAL 701 Query: 340 LEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L++ + + + +D + ++ G ++ + L ++E + Sbjct: 702 LQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETD 761 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E ++++ L + + ++ L + + + Sbjct: 762 TVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDG 821 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL ++ + + + + L N +R A+++ + +L+ Sbjct: 822 LDTASLLKHADAAMYRAKESGKN-TFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHY 880 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G+++P +F+PL + L ++ + Sbjct: 881 QPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVE 940 Query: 566 HPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + R +VNL + + I ++P + LEITE NAE + Sbjct: 941 WQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAR 1000 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ H G + IDDFGTGY+++ LK D +KID FV+DI + D I ++I Sbjct: 1001 EVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAII 1060 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +A + + VVAE VETQ+Q A L K G +QG+L P Sbjct: 1061 AMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPL 1101 Score = 56.2 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 85/318 (26%), Gaps = 25/318 (7%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 ++ V + L ++ I ++ L L+IL +FG+R + G T+L Sbjct: 20 LSIIVFVYCLLGSLNLWIPIPDAWATLISPTAGFSLAILLVFGYRAWPAIFMGSLFTHLH 79 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 T + + ++ C + L R+ + L + I Sbjct: 80 ATVYYVAATMAVGDTLETLLAC------YLLKQVARFDPALIRLRDFLTLVFFAVGISPL 133 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 S + +T ++ + D S ++Y P Sbjct: 134 VSALINVLMLVVVGADTTALANSFTNSWLEDAFSYLLFTPAVLAFYHY------EPIRWS 187 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + G + L+ L A+ + L P + F + + Sbjct: 188 WARVGEALILAGLVVFSCLLTMLGAMDKSMSQLMQPQAF---------MLFPLIMWAALR 238 Query: 258 L---RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 L A++ L + + +L ++ S + + + Sbjct: 239 FHQRGAALSVLFVAMTALWGGAHGLGTFAHDFAQSNLLDYWMYVLVLSSTGVALSGLNAG 298 Query: 315 SEWLNRRW-HLQALTDPL 331 R D L Sbjct: 299 RIRSEARLKEQLDTYDAL 316 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 89/462 (19%), Positives = 186/462 (40%), Gaps = 18/462 (3%) Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 L+ +Y + V ++ + + A D LT LPN Sbjct: 341 LKLSGNDYYITLSPIEENGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRTLFH 400 Query: 342 Q--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + A +++ + +D + ++ G + ++++ L+ +++ + + Sbjct: 401 EKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSV 460 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E + L+G + I+ S I ++ + + + + + + Sbjct: 461 SRLGGDEFAIFLTGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDI 520 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL + E + K++ L +R ALD+ L+ QP Sbjct: 521 EALLKHADAAMYLAKEQGKN-NYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPK 579 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + ++ D G++ P +F+P+ + L V+ + + Sbjct: 580 IHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQE 639 Query: 569 DKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 +VN+ +Q N+ I + + ++PQ + LEITE A N + ++ + Sbjct: 640 AGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRIL 698 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G I+IDDFGTGY++ L + D +KID F++++ N + I+++I +A Sbjct: 699 NRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMA 756 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++V+AE VET + L + +QGY +P P + Sbjct: 757 HNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKE 798 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 90/470 (19%), Positives = 180/470 (38%), Gaps = 24/470 (5%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + V+ + + + R A D LT LPN R Sbjct: 396 RKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRL 455 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + L +D + ++ G + + + ++E + Sbjct: 456 FTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVREGD 515 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L + + + + + + ++ L + + + Sbjct: 516 TVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDG 575 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T++ L+ ++ + ++ ++ +++ + +++R AL + + L Sbjct: 576 TTVEALIKNADTAMYRAKDLGRN-SYQLYTAAMNARSFERLTMESSLRHALTREEFRLVY 634 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + G + ++ + G+++P F+PL + + VL + + Sbjct: 635 QVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKH 694 Query: 566 HPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R +VN+ ++ ++ + R + + PQ + LE+TE + + Sbjct: 695 WMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELELTETVLMQRVDEVV 754 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN-----TLDAMI 679 ++ L G RI+IDDFGTGY++ LKR+ D +K+D FV DI A I Sbjct: 755 AVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEI 814 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V +I +LA L +AE VET +Q L G +QGYLI RP D Sbjct: 815 VSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGED 864 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 105/488 (21%), Positives = 183/488 (37%), Gaps = 21/488 (4%) Query: 261 PFLNLTWAVSTL-CLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRIYHRS 315 P WA+ + ++ Y ++ + + + Sbjct: 314 PDSRTVWAIVGEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDITAR 373 Query: 316 EWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHY 367 + A D LT L N +L +A + L +D + ++ Sbjct: 374 KRAEADIQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSL 433 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 G + ++ + R L ++E + + +L G E ++VL G + H+ L ++ Sbjct: 434 GHPVGDELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSA 493 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + T L F + L+ + A + ++ Sbjct: 494 PYCVDTTELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAK-FQFYTDEMNRA 552 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 T ++ L +R A+ +G+ L+ QP + G + ++ G++ P +F+PL Sbjct: 553 ATARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPL 612 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + + VL + R SVNL L +K + + Sbjct: 613 AEETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAAS 672 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P + LEITE N + ++ ++ L G RIAIDDFGTG+++ LK D + Sbjct: 673 GLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHL 732 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+ DI + D MIV + LA LSV+AE VE+ Q A L +LG LQG+ Sbjct: 733 KIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFH 792 Query: 721 IGRPQPLA 728 RP Sbjct: 793 FSRPVTAD 800 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 115/659 (17%), Positives = 220/659 (33%), Gaps = 52/659 (7%) Query: 109 GTRWRYGLTSRYVW-QRLFWLGLVTP---IGIKC---SMYLVGSFFDFPLKISTFFGDAD 161 G T + R FW + + Y G+ PL Sbjct: 493 HEPGGSGPTGIALREDRPFWCQDFANDPVTAVWHERAAEYGWGASASIPLHCHGIVVGTL 552 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK--RAFTLSW 219 ++ L M + FA + + E + Sbjct: 553 TLYA-------EEKNAFDEPARNLLLEMAMDISFALERFDAETERKKMSETLLKLSLAVE 605 Query: 220 LAALSVLLLLLCT---PYENDF--IAGYLVPVFF----IIFTLGVGK-------LRYPFL 263 + S+++ L ++F + GY + G + Sbjct: 606 QSPNSIVITDLDANIEYANSNFTKVTGYSLDEVLGKNPRFMQSGKTPKATYEDMWAHLTR 665 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 W +++ V L ++ + + L + R Sbjct: 666 GEPWKGELFNRRKDGTEYIESV-----LISPVSQVDGRVMNYLAIKEDITEKRLTEERIE 720 Query: 324 LQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 D LT LPN L + + L +D+ + ++ G + Sbjct: 721 KLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQL 780 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGL 433 + + + L +++ + + + G E +L+L G + G ++ S+ + L Sbjct: 781 LMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGAAHVAAKLMEAVSQAFQFEQHEL 840 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + E + L + + + + + L N Sbjct: 841 VATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRN-GFCFFTSEMQAHSARTLQLGN 899 Query: 494 TIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R AL +G L L+ QP + G + +L + G ++P +F+P+ Sbjct: 900 ALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIP 959 Query: 551 FDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + +K L +VNL Q N+ + + + + + L Sbjct: 960 IGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLEL 1019 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE A + + ++ +++LH G +++IDDFGTGY++ LKR + +KID FV D Sbjct: 1020 ELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHD 1079 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I + D IV +I ++A + + +AE VET Q + L G +QGY +P P Sbjct: 1080 ITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAE 1138 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 135/728 (18%), Positives = 260/728 (35%), Gaps = 47/728 (6%) Query: 47 MPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRW 106 + + L+ + + R VVP + L V + A R Sbjct: 76 LITSISLAAILAYIQRTVVPSSELLVWCLLMVLASLLRAALVYSPQTLRLDDAAAVQARL 135 Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY-LVGSFFDFPLKISTFFGDADAIFT 165 Q + + L P + ++ L G + S A A Sbjct: 136 QKFRIGVVVAGAVWGSAGLLLFPAHHPQYVMFLIFTLAGMTAGGVISFSADLVSAVAFSV 195 Query: 166 VVDLLSLF--------TAVLIYNMLFYYLTRMIVSPHF----------AQILWRRDIAPS 207 ++ L + + + YL MI S +I Sbjct: 196 LLSLPVAIRLFVTGDHLSEAMGVAVLLYLGFMIASIRRINQNICENIILRIEAAAREGKV 255 Query: 208 LGKEKRAFTLSWLAALSV------LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK-LRY 260 E+R L + + L++ C + + + V + L + + Sbjct: 256 RESEERYRLLLSHLPVGIFHYNTDLVITYCNDRLAELLHNSVEHVIGLDMKLVKDQAILP 315 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 + +Y + Y + +V+ + Sbjct: 316 SLRKALEGERSNFEGHYLATYSDAEGWAYITCTPFHDHNGQIAGGIAIVQDITEHKAAEE 375 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMR 372 + + A DPLT LPN R L + + + +DN + ++ G M Sbjct: 376 KINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALNDTLGHDMG 435 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---R 424 +R + + L ++E + + +L G E +++L E + + + + + Sbjct: 436 DLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGEKILAMLGL 495 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 F G++ + LL + Q+ + ++ + Sbjct: 496 PYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQAGRN-TVRFFDQQMQDA 554 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLI 542 T +V L + ALD+ L+ Q + G G + ++ + + G++ PD+F+ + Sbjct: 555 VTARVALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALIRWMHPERGLVPPDQFIGMA 614 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +L V+++ L T +VN+ Q + ++ +R+ Sbjct: 615 EETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQRH 674 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 I P+ + LE+TE N E ++ + L + G + ++DDFGTGY++ + LKRL D I Sbjct: 675 AIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQI 734 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+DI +++ D IV +I +A+ L V+AE VET++Q+ L G + QGYL Sbjct: 735 KIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYL 794 Query: 721 IGRPQPLA 728 G+P P+ Sbjct: 795 FGKPVPVE 802 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 104/457 (22%), Positives = 185/457 (40%), Gaps = 16/457 (3%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 TE+ + + + + R H A DPLT LPN L + Sbjct: 368 TEHLTITGIRGPDGTFTHYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGA 427 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 Q + L +D +F++ G + ++++ L ++ ++ + +L G Sbjct: 428 ALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGG 487 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +VL + L R + + + + + + T + L Sbjct: 488 DEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLR 547 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 ++ ++ T ++ L + + AL + + L+ QP + Sbjct: 548 MNADTAMYRAKERGKN-NFQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLA 606 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKK 571 G + +L ++ G ++P F+P+ + NL + VLE + Sbjct: 607 HGHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLL 666 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL + Q +I + R+ + ++ + LEITE A N + ++ L Sbjct: 667 PGTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLK 726 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G RIAIDDFGTGY++ LK+L D++KID FV D+ + DA I +I + ++ + Sbjct: 727 ALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLN 786 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VAE VE ++ + L G QY QGYL RP P A Sbjct: 787 LQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAA 823 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 127/711 (17%), Positives = 235/711 (33%), Gaps = 65/711 (9%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY--- 120 V V+ G+ C L L A + G LC G R + S Sbjct: 266 VAGVVLGIGCAVLEFLQLRGRVRAAIGGFVVLSALCFLGSAWHATGYRAGAAVLSVLAVA 325 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 L ++ +G+ T G F+VV L L Sbjct: 326 TMVLLVRGVFSGDASLRLFTLGLGA---------TMVGGGVQAFSVV-GSGLEVGRL--- 372 Query: 181 MLFYYLTRMIVSPHFAQILW----RRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTP 233 F + + F R + E + + W +L++ +C Sbjct: 373 AAFAFPLGSLCQAAFWLAALIIRLRSEHRELHELEGKQAAIMWAMPDLILVIDRQGICLD 432 Query: 234 YENDFIAGYLV--------PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 Y+ + + V V ++ + G +R + ++G Sbjct: 433 YKQPYATRFFVTGDELLGKDVSAVLPSATAGTIRQGIERALHQGDLQSVF--LDLPVEGS 490 Query: 286 ETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 Y + ++ +VR + + A D LT LPN ++ + Sbjct: 491 MHHYE----ARIAPHGPDKVVVVVRDITLQKHSEEKIRRLAYFDTLTGLPNRQSFLERLD 546 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ-- 395 + L +D + ++ G ++++ L ++ + + Sbjct: 547 RELLRARRTNHRMALLFLDLDGFKRINDTLGHSAGDCLLQTVADRLQEKLRAGAFIARPA 606 Query: 396 ----------LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWG 442 L G E +VL +T + + R + + Sbjct: 607 LDESSLHFARLGGDEFTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEIAVTSSIGIA 666 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F + LL + + ++ +TT ++ L IR L++G Sbjct: 667 LFPDDGADAATLLKHADTAMYYAKEQGRN-NWQLYDRTLTTRTTARLALEGDIRKGLERG 725 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L+ QP + G + ++ G+++P +F+P+ + L VL + Sbjct: 726 EFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTAA 785 Query: 560 LKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + PR +VN+ L + + I+ + LE+TE Sbjct: 786 CRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTESILMD 845 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + +L G +IDDFGTGY++ +KR +KID FV + + DA Sbjct: 846 PEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDAG 905 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +I +A++ +L VVAE VET++Q A L + LQGYL P P + Sbjct: 906 ITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDE 956 >UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobacteriaceae RepID=YFEA_ECOLI Length = 729 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 729/729 (100%), Positives = 729/729 (100%) Query: 1 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG Sbjct: 1 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY Sbjct: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN Sbjct: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA Sbjct: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS Sbjct: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL Sbjct: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI Sbjct: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM Sbjct: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP Sbjct: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY Sbjct: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII Sbjct: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL Sbjct: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 Query: 721 IGRPQPLAD 729 IGRPQPLAD Sbjct: 721 IGRPQPLAD 729 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 108/500 (21%), Positives = 189/500 (37%), Gaps = 31/500 (6%) Query: 258 LRYPFLNLTWAVSTLCLLNY-----NQNFLQGVETEYSLAFILAVLISFSVCLLY---MV 309 W + N + + + ++ + L + + Sbjct: 245 FPRDIAQSMWDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVCTIG 304 Query: 310 RIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCC 354 + R + A D LT LPN + + Sbjct: 305 TDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALML 364 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L ID + ++ G +++I L +++ + + +L G E ++VL G + Sbjct: 365 LDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDV 424 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + N L SR + + + F + LL ++ Sbjct: 425 IFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKN 484 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKY 528 + ++ +LL N +R A++Q L LY QP + + G + ++ Sbjct: 485 NC-QFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHP 543 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + G+++P F+PL + L VL K K + +VNL P QK Sbjct: 544 ERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQK 603 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N G++ + + + + + LEITE A +A ++ + QL++ G +AIDDFGTGY+ Sbjct: 604 NFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYS 663 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+R +KID F+ DI + DA I ++I LA L VVAE VET+ Q Sbjct: 664 SLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEW 723 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 L G +QG+L +P Sbjct: 724 LRAKGCDQVQGFLYAKPMTA 743 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 128/654 (19%), Positives = 228/654 (34%), Gaps = 27/654 (4%) Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFW--LGLVTPIGIKCSMYLVGSFFDFPLKISTF 156 A L Q L LGL+ + + + Sbjct: 278 LGWASLVRQDVNTAFAPARQLQQHIWLVGAALGLLFAWLGWLMAGRIARPISLISQAADK 337 Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 D + + L + + + + + + + E Sbjct: 338 VAGGDLEYELPARLGEGEVAHLSTAIHDMVVNLTHEIKQRKEAEQGLRLSAKVFESNTEA 397 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVP--VFFIIFTLGVGKLRYPFLNLTW-AVSTLC 273 + A +++ I GY + L G+ F W A+ Sbjct: 398 IMITDAEQNIVM---VNQAFTQITGYGADEVLGQRPKLLSSGRHGPEFYEAFWHALRAND 454 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDP 330 L + + ++ L + + + + R + A D Sbjct: 455 LWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLDITERKKEEERINYLANYDV 514 Query: 331 LTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L + + +D + ++ G + ++ + Sbjct: 515 LTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAAR 574 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGA 439 L ++ ++ + +L G E + +LS ++ + + + + L + Sbjct: 575 LKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPSI 634 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + ET LL Q+ ++ + +++ L +R A+ Sbjct: 635 GICIYPDDGETSVELLRNADLAMYQAKDDGRN-NFKFYSPDMNRKALERLKLETFLRVAI 693 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 Q L +Y QP + + G + +L + G ++P F+P+ + L VL Sbjct: 694 VQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIAEETGLINEIGDWVL 753 Query: 557 ESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 +VNL L Q N A R++ + + + ++LEITE Sbjct: 754 RQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAGLDAHYLVLEITESM 813 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 S ES + +EQL G R+A+DDFGTGY++ RLK L D +KID FV+DIVT+ Sbjct: 814 LMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPN 873 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV + LA A +L V AE VETQ+Q + L + QGYL RP P ++ Sbjct: 874 DASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASE 927 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 108/472 (22%), Positives = 192/472 (40%), Gaps = 19/472 (4%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTD 329 + N+ + ++ + + LL V + QA D Sbjct: 219 VVTNFESRVHRRNGEVIWISENARSVYNSDGTLLFFEGTVEAITERKLHEAEIQFQATHD 278 Query: 330 PLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN L +Q + L +D +F++ G + ++ + Sbjct: 279 ALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQ 338 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYG 438 L ++E++ + + G E +L+L+ E + H + + S+ N+ + Sbjct: 339 RLTSCLRESDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCS 398 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + LL ++ ++ T ++ LLN +R A Sbjct: 399 IGLTLCPDDGRDAETLLKNADSAMYKAKELGRN-NFQYFSAEMNSSVTDRLELLNRLRQA 457 Query: 499 LDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + D +L+ QP + + G + ++ G+++P F+PL + L V Sbjct: 458 ITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWV 517 Query: 556 LESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + + SVNL P L + +I + R+ + Q + LEITE Sbjct: 518 LRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITES 577 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 ++ E S + QL G +I++DDFGTGY++ LKR D +KID FV+DI T+ Sbjct: 578 VMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQ 637 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 A IV++I L + +L+V+AE +ET+ Q L G QGYL+ +P P Sbjct: 638 DSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVP 689 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 93/465 (20%), Positives = 176/465 (37%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + + Y ++ + + + + + A D LT LPN Sbjct: 925 RKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKAAEEKISHLAHFDTLTDLPNRSN 984 Query: 338 ------RALEQAPE--QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 +AL A + L +D + ++ G + + + L +++ Sbjct: 985 LQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRD 1044 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGN 447 ++ + +L G E ++VL+G + + IL SR L F + Sbjct: 1045 SDVVARLGGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPAD 1104 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E+++ L+ + + ++ + + L + AL Q +L+ Sbjct: 1105 GESVEVLMQNADAAMYHAKSAGRNNV-QFFTASMNEAASDRRQLEEDLHLALQQKQFVLH 1163 Query: 508 AQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + +L G++ P +F+PL L VLE+ + Sbjct: 1164 YQPQVDAQRRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKA 1223 Query: 566 H--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + + +VN+ Q + + + +P + LE+TE N + Sbjct: 1224 WSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADT 1283 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + + G ++DDFGTGY++ L RL D +KID FV + N DA+I ++I Sbjct: 1284 IDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTI 1343 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + ++ L VVAE VET+ Q+ L G QG+L RP + Sbjct: 1344 VTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVD 1388 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 108/465 (23%), Positives = 190/465 (40%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + L+V+ + + + R + R A D LT LPN Sbjct: 345 RKNGEIFPELLTLSVVRDHNGKVSHYVGVFSDISRMKETEARLQRLAHYDALTDLPNRVL 404 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + L ID + ++ G + + I R L ++ + Sbjct: 405 LNLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAED 464 Query: 392 KLYQLPGSELLLVLSGPETEGR----LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 L +L G E +++L + Q ++++LN + + +G + + Sbjct: 465 TLARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLD 524 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L+ Q+ + ++ +++ L +R L++G+ +L+ Sbjct: 525 TDDATQLISNADAALYQAKEAGRNV-YRFYTADLTRAAHERLGLEAALRRGLERGEFVLH 583 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ E G + ++ G++ P +F+PL + L VLES + Sbjct: 584 FQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGR 643 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VNL ++ + + R + LEITE +A+ ++ Sbjct: 644 EWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAV 703 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L G R++IDDFGTGY++ LKR D +KID FV+DI + D MIV ++ Sbjct: 704 ATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVV 763 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L V+AE VET +Q A L LG + QGYL+GRPQ AD Sbjct: 764 AMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAAD 808 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 93/437 (21%), Positives = 174/437 (39%), Gaps = 16/437 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 ++++ + R A D LT LPN + L +A + + Sbjct: 376 HYVWILADITERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFI 435 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + +R + L L++E + + +L G E +++L + Sbjct: 436 DLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAA 495 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S I L F + +L + A Sbjct: 496 IVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRN- 554 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 ++ +++ + +R A+ + +L L QP + G + +L Sbjct: 555 NYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPT 614 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKN 588 G+++P +F+P+ + + VL + +A K R +VN+ L +++ Sbjct: 615 DGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRD 674 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + LEITE N + +++ +E+L + G +AIDDFGTGY++ Sbjct: 675 FCETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSS 734 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK D +KID FV DI + D I LA + L+V+AE VET+ Q LL Sbjct: 735 LAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELL 794 Query: 709 HKLGVQYLQGYLIGRPQ 725 G +QG+L +P Sbjct: 795 RANGCDEVQGFLFSKPL 811 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 105/457 (22%), Positives = 184/457 (40%), Gaps = 17/457 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA-------- 339 + +A + ++ + + R DPLT LPN R Sbjct: 600 QILTINTVADSQGRPSHYVGVMTDISQLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHA 659 Query: 340 LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 LE+A Q + + +D + ++ G + + R L ++E++ L +L G Sbjct: 660 LERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGD 719 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLL 455 E L++L + + L S + H N L +G + + T+ L+ Sbjct: 720 EFLVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLI 779 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q+ ++ +++ L + AL + +L+ Q + Sbjct: 780 QHADVAMYQAKEEGRN-TYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMR 838 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK- 571 G + ++ G++ PD+F+PL + L VL + Sbjct: 839 DGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLT 898 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL L ++ R+ R+ + + + + LE+TE E ++ + L Sbjct: 899 DLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALK 958 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G R++IDDFGTGY++ LKRL D +KID FV+DI ++ D I +I +A+ Sbjct: 959 ALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLR 1018 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+V+AE VET +Q L + G QGYL GRP P Sbjct: 1019 LNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAE 1055 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 102/494 (20%), Positives = 196/494 (39%), Gaps = 18/494 (3%) Query: 252 TLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS--VCLLYM 308 L G+ F W ++ +L + + Y +++ + + Sbjct: 897 LLASGRHDQAFYQSMWESIESLGHWQGEIWNRRKDGSVYPEWLLISRVDGDGAPTHYIGT 956 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNL 360 + + A D LT LPN LE+ + + +D Sbjct: 957 FIDITQHKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRF 1016 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + + L +++ + + +L G E ++VL + +G + Sbjct: 1017 KNVNDSLGHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKL 1076 Query: 421 LN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L + L A + + E+ + L ++ A Sbjct: 1077 LEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRN-AYCFFT 1135 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + ++ + + + N +R AL+ G+L L+ QP ++ G + +L G+++P Sbjct: 1136 AEMQERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSP 1195 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 +F+P+ + L VL + + L + +VNL + Q ++ + Sbjct: 1196 VEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVS 1255 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 R+ ++ Q + LE+TE A N +++ +++L G R++IDDFGTGY++ LKR Sbjct: 1256 RILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKR 1315 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 + +KID FV D+ + D IV + LA+ L +AE VE++ Q A L G Sbjct: 1316 FRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCD 1375 Query: 715 YLQGYLIGRPQPLA 728 QGYL RP A Sbjct: 1376 EAQGYLFSRPLAPA 1389 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 97/463 (20%), Positives = 188/463 (40%), Gaps = 18/463 (3%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + TEY ++ L L + + + R A D LT LPN Sbjct: 827 RKDGTEYVELARISPLRHTDGRVTNYLSIKEDITEQKQVEARIRQLAHFDLLTGLPNQTL 886 Query: 340 LEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + L ID+ + ++ G + + + + + L+++ + Sbjct: 887 LKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDED 946 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQE 449 L + G E +LVL + +G IL ++ + L + + + Sbjct: 947 TLSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGM 1006 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 L ++ + ++ +++LL N +R AL + L+ Q Sbjct: 1007 DFDKLYQSADVAMYRAKQDGRN-NFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQ 1065 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + G + +L + G ++P +F+P+ + L VL + ++ + Sbjct: 1066 PQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRW 1125 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 ++NL + Q ++ ++++ +++P + LE+TE A N ++ Sbjct: 1126 QDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIG 1185 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + LH G R++IDDFGTGY++ L++ + + +KID FV+D+ + IV +I Sbjct: 1186 VMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIIT 1245 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + +AE VET Q A L G +QGY RP +A Sbjct: 1246 LASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVA 1288 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 106/598 (17%), Positives = 225/598 (37%), Gaps = 19/598 (3%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 F + G+ I V+D ++ + +L + R+ + ++A S+ Sbjct: 442 FGAPLVAPSGETIGIIAVMDKKAMDIEEWVKPVLGLFANRVALELQRQSTHKEMEMAASV 501 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 KE + + +L + + +V ++ N A Sbjct: 502 FKESAEAIVICDSEDKILRVNPAFYKITGYSQIEVVGQ-SPQLLQSDRPIQSMLHNREAA 560 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQ 325 + + + + + + + + ++Y+ + + Sbjct: 561 LKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITERKLFEEHIYNL 620 Query: 326 ALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN ALE+A + + + +D+ + ++ G + ++ Sbjct: 621 AHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQ 680 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLD 434 + +++ + + + G E ++LS T+ + L + ++ + Sbjct: 681 QVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVV 740 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + G F N +++ L+ ++ + ++ +++ L Sbjct: 741 ISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRN-CFQFYTKEMNQYAQERLELELD 799 Query: 495 IRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 +R AL++ + +L+ QP + G + ++ D G+++P +F+ + L Sbjct: 800 LRKALERDEFVLHYQPQFDPNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIG 859 Query: 553 LQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+++ SVNL L ++ + I+P + LE+ Sbjct: 860 KWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELEL 919 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N E ++ + + G ++IDDFGTGY++ LKR + +KID FV+ + Sbjct: 920 TESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLP 979 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D IV+SI +A A +L+V+AE VET +Q L + QGY RP AD Sbjct: 980 QDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAAD 1037 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 98/324 (30%), Gaps = 33/324 (10%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV 64 L +++ L TL+ V LS + + + W P + +S + IFG+R Sbjct: 4 EKLKHHLRYLALCATLSFVYY-LSGRLGLSLAFEQAGVSPVWPPTGIAISAVLIFGFRVW 62 Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 ++ G NL + LG+ ++ ++R T Sbjct: 63 PGIMLGALLVNLSIALPFSAAILIALGNTLEAIVAGYLLIRCAERYP----FTQVNHTAW 118 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVD-LLSLFTAVLIYNMLF 183 + ++ P+ + L + ++ L L+ L Sbjct: 119 FIAIAVMAPM-------FSATIGLVSLSMHNLIEASELGIVWSTWWLGDIVGALVIVPLL 171 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 +R + + G A + L +L + LL+ +P+ ++ L Sbjct: 172 -------------LTWFRPHESMNGGVPVMALWGTCLVSLGLALLIF-SPWHTEYDPHQL 217 Query: 244 VP-VFFIIFTLGVGKLRY----PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + + + + + ++ L F+ + L +V Sbjct: 218 LIFMMLPLLIWTALRFHHRGSTLLVTVFSGIAISGTLVGYGPFVMESTNQSLLTLQASVG 277 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRW 322 L+ + + +NRR Sbjct: 278 AIMVTILILIAS-QEERKRVNRRL 300 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 102/558 (18%), Positives = 211/558 (37%), Gaps = 24/558 (4%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVPVFF--- 248 + + + R + + ++ L + + GY + F Sbjct: 283 TLKNYLLYEERQKSEERYRYLFQNANDPIFIIDRELKFINVNRRAMDLFGYGLDEFVAMN 342 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL--L 306 ++ + ++ L S L + N ++ + + + + + Sbjct: 343 MVDLVPEEQIPRIQGELKKMESMEALDKLSTNIRTKWGYSLNVEISSSPFVERNNVMGSI 402 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 ++VR S+ + QA D LT L N ++ L +D Sbjct: 403 HIVRDVTESKKMEDEIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDLD 462 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G ++ I L ++E + + ++ G E ++++ + Sbjct: 463 RFKSINDSLGHAAGDKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAIA 522 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 N + S + + L + + + E + LL + Sbjct: 523 NKILSSMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRN-NYQ 581 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 ++ +T ++V + N +R AL++ +L++ QP + G + ++ L + G+ Sbjct: 582 FYNPALNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLHPELGL 641 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 ++P F+P+ + D VLE+ + + +VN+ + ++ Sbjct: 642 LSPGHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRRPDLVD 701 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ R+ + P+ + LEITE A + E ++ ++ L AIDDFGTGY++ Sbjct: 702 QVRRVLNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSSLSC 761 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK+L +KID F+ + T+ D IV +I +A L V+AE VE Q LH+ Sbjct: 762 LKKLPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFLHQN 821 Query: 712 GVQYLQGYLIGRPQPLAD 729 +QG+L RP P D Sbjct: 822 HCDQMQGFLYSRPIPAED 839 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 120/587 (20%), Positives = 220/587 (37%), Gaps = 34/587 (5%) Query: 175 AVLIYNMLFY-------------YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 +I M FY L ++ FA + ++ L + A + + Sbjct: 449 GNVIGVMFFYSNVLNAFTESSQRLLLELVEDIDFALEHFEKEEQLQLSAQIFAQSSEGIM 508 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 L ++ I GY R + + A+ T Sbjct: 509 LLDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQHDRNFYATMWEAIETEGRWQGE 568 Query: 279 QNFLQGVETEYS---LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + Y L + + + R A DPLT LP Sbjct: 569 VWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLP 628 Query: 336 NFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L A + + L +DN + ++ G + ++ + L+ + Sbjct: 629 NRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAV 688 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFD 445 +E + + +L G E +LVL G +T+G +LN +RQ + +++ + Sbjct: 689 REQDTISRLGGDEFVLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYP 748 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + L ++ + ++ + + + N +R AL++ Sbjct: 749 TDGTDFDTLWRSADAAMYRAKQSGRND-YCFFTTEMQARSARTLQIDNALRRALERNQFS 807 Query: 506 LYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L QP + G++ ++ G PD+F+P+ VL++ ++ Sbjct: 808 LVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQ 867 Query: 563 LATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 L + SVNL + + ++ + + +SP+ + LE+TE A N Sbjct: 868 LRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPL 927 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 +++ I++L K G RI+IDDFGTGY++ LKR +KID FV+D+ +T D IV Sbjct: 928 AAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVS 987 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ LA + + VAE VET++Q L G +QGY + RP Sbjct: 988 AVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQAD 1034 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 103/487 (21%), Positives = 193/487 (39%), Gaps = 22/487 (4%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS-VCLLYMVRIYHRSEWLNRR 321 L+L V + + N ++ + + + +R + Sbjct: 399 LDLLSTVDGIEGASAEVNGRHANGAIRPISVSASRIPHTEHDTFVVTLRDITQQRQDEEE 458 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRV 373 A DPLT LPN R L Q + L +D+ + ++ G + Sbjct: 459 IRRLAFYDPLTGLPNRRLLMDRVRQAMVNSARLGQHGALMFLDLDHFKLLNDTLGHDVGD 518 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN---SRQ 425 ++ + L ++E + + +L G E +++L G + + + + + + + Sbjct: 519 ELLQQVAYRLRNCVREGDSVARLGGDEFVVLLEGLSDNRTDAANQAEVVAHKILDALALP 578 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 G + F + ET+ LL + Q+ A A + ++ Sbjct: 579 YSLRGHGYNSTPSIGIVVFMEDHETMDDLLKKADVAMYQAKAAGRNTA-RFFDPVMQAAV 637 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYDEILARLKYDGGIMTPDKFLPLIA 543 T L IR L + + +L+ Q + +G G + ++ G+++P F+PL Sbjct: 638 TTHAELAKEIRLGLQRHEFVLHYQVQIDSQGRCTGAEALVRWNHRVRGLVSPAHFIPLAE 697 Query: 544 QFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + + V+ES + L + +VN+ L Q + +R Sbjct: 698 ETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQPEFVASVREALQRSG 757 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + LE+TE + E + + + + G ++DDFGTGY++ LKRL +K Sbjct: 758 APAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSSLSYLKRLPLSQLK 817 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D++T+ DA+I R++ L + L+V+AE VET +Q+ L + QGY Sbjct: 818 IDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYF 877 Query: 722 GRPQPLA 728 GRP P Sbjct: 878 GRPAPAD 884 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 109/563 (19%), Positives = 219/563 (38%), Gaps = 24/563 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 R + H + I ++ T+++ +L L E + + L Sbjct: 287 KAYRELRKQHEWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLGL---SEEEILGKKLD 343 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + + + P + S + L + + + + +A + + S Sbjct: 344 KLLSGLVDKREKVYKIPIEEVVNRGSMIKL-ETDLSLVTPGGRRL-VEGTVAPIRNDSDV 401 Query: 305 LLYMVR---IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 ++ V + + + DPLT LPN + Sbjct: 402 IIGTVVALKDITEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALI 461 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +DN + ++ G + ++ + + ++E + + ++ G E +++ + Sbjct: 462 ILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQIKDIND 521 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + G + E Q + ++ Sbjct: 522 ATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGR 581 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 E ++ + +++ + N++R A+++ + +L+ QP + + G++ +L Sbjct: 582 N-NYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYH 640 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQ 586 D G+M P +F+P+ L VLE+ + P SVNL + Sbjct: 641 PDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQR 700 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 NI I R+ ++P+ + LEITE A + ++ + QL K G R+++DDFGTGY Sbjct: 701 SNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGY 760 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L++L D +KID FV+DI N+ + I +++ LA L+VVAE VET++Q Sbjct: 761 SSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLL 820 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K QGYL +P P + Sbjct: 821 FLKKEKCDKAQGYLFSKPLPAEE 843 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 116/693 (16%), Positives = 231/693 (33%), Gaps = 39/693 (5%) Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLC--------ACAILRWQLGTRWRYGLTSRYVW 122 + N ++ + +LG ++ C + + + G R L + Sbjct: 169 ISYANAAFAQITGIPAVDLLGRSLTLLACEGEDGQTCTAMVSQMRTGGSMRRTLRCQRPD 228 Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS-LFTAVLIYNM 181 LFW + + + + + L + Sbjct: 229 GSLFWNDVTLSPIFNERGEISQCIAVLADATALKESEQALRRSRDALERQVEARTENLTE 288 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + L R I + R ++ A W + + + Sbjct: 289 VVRQLRREIEERTRVESALRLSEQRLANAQRIARLGHWE----WEIATGRLYWSAEVYNL 344 Query: 242 YLV------PVFFIIFTLGVGKLRYPFLNLTWAVSTLCL-LNYNQNFLQGVETE---YSL 291 + P + + G R L + +E + Sbjct: 345 LGLGPEFTTPDYERFLEMIPGDDRQRLQEAIARCLEHGLPYEIDHRITCPDGSERILHED 404 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 ++ + L + R A DP+T LPN + + Sbjct: 405 GELVYDDEGKPLLLRGTAQDITERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANA 464 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +D + ++ G MM +R LL ++E + + + G E ++ Sbjct: 465 TRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAERLLGCVREGDTVARFGGDEFII 524 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L E + + R + + E + L+ Sbjct: 525 LLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADS 584 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 + A ++ + +++LL N + AL+ G ++ QP + Sbjct: 585 AMYLAKAQGGA-GYRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHYQPQMDLRSGRIC 643 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 G + ++ + G++ P +F+P+ L VL + + + S Sbjct: 644 GVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLS 703 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL P ++ G + R+ + + + LEITE + E ++ + ++ + G R Sbjct: 704 VNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLGVR 763 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTG+++ LKRL +KID FV I ++ DA I ++ L + L V+A Sbjct: 764 VSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIA 823 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q + L + G +QG+ I RP P + Sbjct: 824 EGVETREQASFLREHGCDAVQGFFIARPMPAGE 856 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 87/443 (19%), Positives = 186/443 (41%), Gaps = 15/443 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + + + A DPLT L N L + Sbjct: 1013 GNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLA 1072 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D+ + ++ G + + + + +L ++++ + + + G E ++VL Sbjct: 1073 LLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDTGEN 1132 Query: 412 GRLQHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 G + IL S Q++ L + + + + LL Q+ Sbjct: 1133 GAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDG 1192 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 + + +++ + + + +R AL LY QP + G + ++ Sbjct: 1193 RNV-YRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIRWN 1251 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 + G ++P +F+P+ Q VL + ++ + K + +VNL + Sbjct: 1252 HPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQFR 1311 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 +++ +++++ + +SP+ + LE+TE A +N E+ + +++L G +++IDDFGTG Sbjct: 1312 YEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGTG 1371 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR + +KID F++D+ ++ D I+ +I L+KA L +AE VETQ Q Sbjct: 1372 YSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQL 1431 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L + +QG+ + Sbjct: 1432 DFLQEKQCDEIQGFYYSKALTPE 1454 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 106/490 (21%), Positives = 201/490 (41%), Gaps = 22/490 (4%) Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 + +W + + + + V + L + Sbjct: 366 ADMWAHLGRGESWQGEFINRRHNGEERIDLVRVS-----PVREADGRITHYLAIEEDITN 420 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRH 366 + R A D LT LPN L++ ++ + L +D+ + ++ Sbjct: 421 QKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDT 480 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR---LQHMVNILNS 423 G + + + + L +++ ++ L +L G E +L+L G E Q ++ +N Sbjct: 481 LGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAKKIAQELMRAINE 540 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + L++ + + + L ++ A S + + Sbjct: 541 -PYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRN-AYRSFTQEMQA 598 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 +T+ + +LN +R A+ Q L ++ QP + + G + +L + G ++P +F+P Sbjct: 599 YSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIP 658 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + L + VL + +VNL + + ++++ K Sbjct: 659 IAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKE 718 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 PQ + LE+TE A + + ++ + LH+ G R++IDDFGTGY++ LK+ +A Sbjct: 719 EDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYK 778 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DI T+ D IV +I +AK L +AE VET +QQA L + G QGY Sbjct: 779 LKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGY 838 Query: 720 LIGRPQPLAD 729 +P P AD Sbjct: 839 HYSKPLPAAD 848 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 97/447 (21%), Positives = 174/447 (38%), Gaps = 17/447 (3%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 + + + + + + A D LT LPN + Sbjct: 1053 IKGETSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNI 1112 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + +++ + L ++E + + +L G E ++L G Sbjct: 1113 VALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVA 1172 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + L + + + + L+ + Sbjct: 1173 KTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAK 1232 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 + ++ T+ VLL ++ A+ + +L L QP + G + +L Sbjct: 1233 SLGRN-NFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALL 1291 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPL 582 + G ++P +F+PL + + + V+ + LA +VNL Sbjct: 1292 RWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSAR 1351 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L +I I + Q++ LE+TE N + S+ + +L G IAIDDF Sbjct: 1352 QLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDF 1410 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID FV+DI + DA I +I LA + L+VVAE VETQ Sbjct: 1411 GTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQ 1470 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L G +QG+L+ +P D Sbjct: 1471 AQLNFLGLQGCDEVQGFLLSKPLSAKD 1497 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 102/470 (21%), Positives = 191/470 (40%), Gaps = 24/470 (5%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 Y+ + + + R S+ + + + A DPLT LPN R Sbjct: 301 SKSGDIYAKNLTITAVRDGKGVVSNYVATFRDITTSKAASEKINNLAYFDPLTQLPNRRM 360 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + L +DN + ++ G + ++ + L ++E + Sbjct: 361 LLDSLRHVLTISARSNQHCALLFLDLDNFKTLNDTLGHDVGDLLLQQVATRLTDCVREGD 420 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL--------NSRQIHWNNTGLDMGYGAAWGR 443 + +L G E +++L + ++ N Sbjct: 421 IVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTI 480 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F GN+ ++ LL Q QS A + + + + +R A++ Sbjct: 481 FSGNETGIEELLKQADIAMYQSKAAGRN-TWHFFNKTMQESIIARADMERDLRKAIEDNQ 539 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L+ Q + + G + ++ + G ++P F+PL + L VL+S Sbjct: 540 FQLHYQAQVSSSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLDSACA 599 Query: 562 WLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 L + + +VN+ L Q++ ++ KR+ I+P + LE+TE N Sbjct: 600 QLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKLELTESMLVEN 659 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + + L K G ++DDFGTGY++ + LK+L + IKID FV+D++T+ D I Sbjct: 660 ISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAI 719 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VR+I ++ + +SV+AE VET +++ L G + QGYL +P P+ + Sbjct: 720 VRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINE 769 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 111/470 (23%), Positives = 191/470 (40%), Gaps = 25/470 (5%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + E L + + + + + + R + R A D LT LPN Sbjct: 759 RKNGEEIWLEMDILPIANSAGVFTHWVSVQRDITERKAAESRIQHLAFYDMLTNLPNRLL 818 Query: 340 LEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L EQ + L +DN + ++ +G + + + LL ++ + Sbjct: 819 LLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITD 878 Query: 392 KLYQLPGSELLLVLSG-----PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 + +L G E ++V+ + + + S+ + Sbjct: 879 TVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQPFRLSGYEHYSSCSIGVAL 938 Query: 444 F-DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F + Q T+ LL + ++ A + + TK+ + +R AL + Sbjct: 939 FCNEQQVTVDELLKRADLAMYEAKAAGRN-TFRFFDPAMQALITKRAAMEEDLRQALRRD 997 Query: 503 DLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 ++ LY QP + +G G + ++ G+++P F+ L + L VL + Sbjct: 998 EMRLYYQPQVDSQGSLLGAEALVRWEHPQQGLLSPAAFIELAEETGLILPIGEWVLRTAC 1057 Query: 561 KWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 L + G SVN+ L Q + R+ + K +PQ++ LE+TE Sbjct: 1058 MQLVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKETGANPQSLKLELTESTLVE 1117 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N E + + L G ++DDFGTGY++ LKRL +KID FV+D++ ++ DA Sbjct: 1118 NIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDAS 1177 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV++I L + VVAE VE+ +QQ L K G QGYL GRPQP Sbjct: 1178 IVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGRPQPAE 1227 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 94/466 (20%), Positives = 184/466 (39%), Gaps = 21/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + + ++ L S + + + + +R A D LT L N Sbjct: 766 RKDGSIFWESASISPLFDESGKIINFIGVKEDITQRKLNEKRLEYMATHDGLTGLANRTL 825 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + L +D + ++ G ++ ++++ + L ++ + Sbjct: 826 LYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTD 885 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +++L+ + + L + L + + + Sbjct: 886 TVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDN 945 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL ++ A L ++ K + + N++R AL++ + LY Sbjct: 946 VDGTILLRNADIAMYKAKAEG--CGLYFYSHEMNEHLIKTLEMENSLRQALEKNEFQLYY 1003 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP G + +L G++ P +F+PL + L + VL + Sbjct: 1004 QPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKI 1063 Query: 566 HPCDK-KGPRFSVNLMPLTLLQ-KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + +VN+ Q +N+ + +R + P + LE+TE +A ++ Sbjct: 1064 WETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNA 1123 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++ + G +++DDFGTGY++ L+ D +KID F+ DI ++ A I+ SI Sbjct: 1124 ERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSI 1183 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VAE VE Q AL+ G Y+QGYL RP P D Sbjct: 1184 IAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPED 1229 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 104/463 (22%), Positives = 186/463 (40%), Gaps = 19/463 (4%) Query: 284 GVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y ++++ + + + R A D LT L N +L Sbjct: 428 KNGEAYPKWLSISLVRDEDGQIRNHIGSFIDISELKATQERIRHLAHHDTLTNLANRFSL 487 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + +D + ++ G + + + L ++E++ Sbjct: 488 HEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDI 547 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++ L G + H+ + + S L + G+ Sbjct: 548 VARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGS 607 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL + A+ E ++ TT+++ L + +R A+ + + LL+ Q Sbjct: 608 EIGDLLKNADVAMYHAKANGRG-NYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQ 666 Query: 510 PIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + ++ G+++P F+P+ + + A VLE + L Sbjct: 667 PQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVW 726 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R S+NL L K + RI L +S + LE+TE + ++ + S+ Sbjct: 727 QNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESIS 786 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ L G ++IDDFGTGY++ LK L +KID FVKDI ++ DA I Sbjct: 787 VMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVL 846 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA L VVAE VET+ Q L +G + +QGYLI +P P Sbjct: 847 LAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPAD 889 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 106/506 (20%), Positives = 204/506 (40%), Gaps = 16/506 (3%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + A L+ + + + + + + + NY L+ + + + + Sbjct: 67 YSAEELLEQMGPLDLILPEQHAFVIEQMQLRAAGVLGHNYELTGLRKDGSTLPIMVLGSP 126 Query: 298 -LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 +I + V + +R A D LT LPN R L + EQ ++ Sbjct: 127 SVIGGLPASVGTVLDISAQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKS 186 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D+ + ++ G + + + R L +++ + L +L G E + + G Sbjct: 187 EIAVIFLDLDHFKRVNDSLGHSVGDELLCEVARRLDSVVRRIDTLARLGGDEFIFAMPGF 246 Query: 409 ETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 T ++ ++ SR L + + + L+ LL ++ Sbjct: 247 HTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAK 306 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEIL 523 A ++ T ++L+ + +R AL Q + +L+ QP+ N E G + ++ Sbjct: 307 EMGRN-AFQFYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALI 365 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPL 582 L + G++ PD+F+ + + L VL + +VN+ P+ Sbjct: 366 RWLHPELGLIMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPV 425 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + + + LE+TE +A+ +M + LH+ G +++DDF Sbjct: 426 QFRQAGFVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDF 485 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR +KID FV D+ T+ D I +I + ++ ++V+AE VE Sbjct: 486 GTGYSSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKV 545 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q ALL K+G QGY RP Sbjct: 546 EQLALLRKMGCDMAQGYYFSRPMSAD 571 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 121/566 (21%), Positives = 206/566 (36%), Gaps = 31/566 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFT-LSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R I + R E T S CT Y + I G V Sbjct: 461 RDITERKQVEAELRIAAVAFDSMEPMMITDASATILRVNSAFTECTGYTAEEIVGQTPRV 520 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE-YSLAFILAVLI---SFS 302 G+ F W + + + E Y ++ ++ Sbjct: 521 LR------SGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTV 574 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + + R A D LT LPN L Q EA + Sbjct: 575 SHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALLF 634 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----E 409 + +D+ + ++ G ++ + R L + E++ + ++ G E ++VL E Sbjct: 635 IDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKNRQE 694 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + + H F G+Q ++ LL Q +S Sbjct: 695 AANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMYKSK 754 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK-EGEGYDEILAR 525 A+ + + ++ L +R A++ LL+ Q G + ++ Sbjct: 755 ERGRN-AVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGTRVTGAEALVRW 813 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLT 583 GI+ P +F+PL + L VLE+ LA D +VN+ Sbjct: 814 QHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQ 873 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + ++ + R P + LE+TE N + + + L G A+DDFG Sbjct: 874 FRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFG 933 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 GY++ LKRL D +KID FV+D++ ++ DA+I R+I LA++ L V+AE VET+ Sbjct: 934 IGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEA 993 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ L G QGY RP P+ D Sbjct: 994 QRDFLAAAGCYAYQGYYFCRPLPIED 1019 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 100/461 (21%), Positives = 195/461 (42%), Gaps = 21/461 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ- 346 E+ + V + + S+ A DPLT LPN R L+ +Q Sbjct: 543 EHLTITAVKDAGGNVVNYVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQA 602 Query: 347 -------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +DN + ++ G + + + L ++E + + ++ G Sbjct: 603 LASCGRSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGD 662 Query: 400 ELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L + + + + + + + D F+ N ++ Sbjct: 663 EFVVMLEDLSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSI 722 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL Q Q+ + + + + ++ L +R A+++ LY Q Sbjct: 723 DELLKQADIAMYQAKKAGRN-TMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQ 781 Query: 512 RN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G + +L + + G+M P +F+P+ + L VLE+ L D Sbjct: 782 VDETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKD 841 Query: 570 --KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + S+N+ Q + ++ Y I P + LE+TE N ++++ + Sbjct: 842 PLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRM 901 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L K G ++DDFGTGY++ + LKRL D +KID F+++I +++ D IV +I +A Sbjct: 902 SALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMA 961 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + V+AE VET++Q+ LL + G + QGYL +P P+ Sbjct: 962 QSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVE 1002 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 107/501 (21%), Positives = 194/501 (38%), Gaps = 25/501 (4%) Query: 252 TLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLY 307 L G+ F + W ++TL + Y + + + + Sbjct: 622 ILSAGRNEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYVA 681 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + + + A D LT LPN R L + L +D Sbjct: 682 IFSDITQRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDR 741 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----L 414 + ++ G + + + ++E + + +L G E ++++ +T + Sbjct: 742 FKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRAEETSKHI 801 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + S + G +E+ LL Q+ Sbjct: 802 AAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRN 861 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYD 529 A+ + ++ +V L N +R AL L LY Q + G + ++ + Sbjct: 862 -AVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAIGAEALVRWIHPI 920 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQK 587 G+++P F+P+ + +L VL++ LA +VN+ Q Sbjct: 921 RGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQV 980 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 I L + Y I PQ + LE+TE ++ + + L G R+++DDFGTGY+ Sbjct: 981 GFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYS 1040 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK L D +KID FV++I T+ DA++V++I +A+ L+V+AE VET+ Q A Sbjct: 1041 SLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAF 1100 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L + G QGY G+P P+ Sbjct: 1101 LKQNGCMCYQGYYFGKPAPIE 1121 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 103/479 (21%), Positives = 187/479 (39%), Gaps = 17/479 (3%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 W+ + + Q + S S + + + + + A Sbjct: 301 WSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDESNSCNYVGVFTDISQIKQSEAQLAQLA 360 Query: 327 LTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 DPLT LPN +A+E+A + +D + ++ G + + Sbjct: 361 HYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIK 420 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW-NNTGLD 434 + + ++E + L +L G E LLVL G + L + + + Sbjct: 421 LAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIF 480 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + F + L+ Q+ E +S +++++ N Sbjct: 481 INASIGISLFPEDASNATELIQHSDMAMYQAKKEGRN-TYRYHTEALSVAANERLIMENR 539 Query: 495 IRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL +L+L+ QP+ + G + ++ ++ P KF+P+ + L Sbjct: 540 LRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIVPL 599 Query: 552 DLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + K +VNL +N+ G + R+ + + + LE Sbjct: 600 GEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELE 659 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE + E S+ + +L G +AIDDFGTGY++ LKR D +KID FV+D+ Sbjct: 660 LTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDL 719 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D I +I +A+ L V+AE +E+++Q A L + Y QGYL RP P + Sbjct: 720 ADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIE 778 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 98/449 (21%), Positives = 184/449 (40%), Gaps = 21/449 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + A D LT LPN R L + Sbjct: 462 GVVTHYVGSYTDLTERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGA 521 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--- 408 + +D + ++ G + ++ + L ++E + + ++ G E +++L Sbjct: 522 LLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIE 581 Query: 409 --ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 E + + + + + F N ++ L Q Sbjct: 582 SVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMY 641 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDE 521 Q+ L ++ + + + L +R AL L L+ Q + + G + Sbjct: 642 QAKKSGRNK-LRFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSAHQTIGAEV 700 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNL 579 +L + GI++P +F+P+ + L L VLE+ L ++N+ Sbjct: 701 LLRWIHPVNGIISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINV 760 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q A + + +R+ I+P + LE+TE +N + ++ + L +FG + ++ Sbjct: 761 SARQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSL 820 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ + LKRL +KID FV+D+ T D IVR+I +A + +L+V+AE V Sbjct: 821 DDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGV 880 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET+ Q+ +L K + QGYL G+P P+ Sbjct: 881 ETEIQRQILLKNQCSHFQGYLFGKPMPIE 909 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 99/560 (17%), Positives = 200/560 (35%), Gaps = 28/560 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF--- 248 ++ E+R T+ + + + L GY Sbjct: 111 ITARKKTEKALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMK 170 Query: 249 IIFTLGVGKLRYPF-LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 I + + L + + +++ + + + LY Sbjct: 171 ITDVTHPDDIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLY 230 Query: 308 ---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 +++ R + R A D LT L N +++ + L Sbjct: 231 TVPVIQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLD 290 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + +R L ++EN+ + +L G E +++LS + + L Sbjct: 291 LDRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPR 350 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + S + + + + LL + Sbjct: 351 VADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGD-T 409 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 ++ + ++ + +R AL+Q + + QP + + G + +L Sbjct: 410 FRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQL 469 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G++ P +F+ L + NL V+ + + + R +N+ +Q + Sbjct: 470 GVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDF 529 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + RL +P+ + EITE + ++++ +E L K G +AIDDFGTGY++ Sbjct: 530 VDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSL 589 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK L + +KID F+ D+ N D IV + +AK L V AE VET+ Q + Sbjct: 590 SCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQ 649 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 K +QG+ RP ++ Sbjct: 650 KRECDEVQGFYFSRPLSPSE 669 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 113/504 (22%), Positives = 206/504 (40%), Gaps = 27/504 (5%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF--LQGVETEYSLAFILAVLISFSVC---L 305 L G+ + F W L ++ + Y + + S Sbjct: 218 HLLASGRHDHTFYREMWD-DILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYY 276 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + + + + + H A DPLT LPN R L + +Q + L + Sbjct: 277 VGIFSDVTKRKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDL 336 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEG 412 DN + ++ G + + + + L ++ + + +L G E ++VL E Sbjct: 337 DNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAAT 396 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + S+ N F G+Q++L+ +L Q+ Sbjct: 397 QADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAG 456 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLK 527 A+ + ++ + L +R +++ L LY Q + G + +L Sbjct: 457 RN-AIRFYDPVMQASIEARAELEEELRQVVERNQLRLYYQVQMDSSNRPLGAEVLLRWQH 515 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLL 585 + G+++P +F+P+ + L VL++ L D +VN+ Sbjct: 516 PERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQFR 575 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + ++ R + P + LE+TE N E ++ + +L G ++DDFGTG Sbjct: 576 SMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTG 635 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ + LKRL D IKID FV+DI +++ DA IV++I +++ L+V+AE VET+ Q+ Sbjct: 636 YSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQR 695 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L G QGYL GRP PLA+ Sbjct: 696 EFLDLRGCHAFQGYLFGRPAPLAE 719 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 188/442 (42%), Gaps = 16/442 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + L+ M +R A D LT LPN L+ + Sbjct: 128 LYLIGMFVDITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVALLF 187 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +DN + ++ G + ++++ + +++ + + + G E +++LS E+ Sbjct: 188 IDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLESAFDA 247 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + L + F + E + LL + + Sbjct: 248 EAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKKNGRN 307 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + + ++ Q ++ + +R AL + +LLL+ QPI N + +G++ +L Sbjct: 308 NC-EFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRWQHP 366 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 G++ P KF+ L + + ++ + PR ++NL + QK Sbjct: 367 GDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQFRQK 426 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I+R+ ++ + LEITE + + E ++ + QL + G I+IDDFGTGY+ Sbjct: 427 TLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFGTGYS 486 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 N LKR Q + +KID FV+DI + D I+ +I +A A L V+AE VE +QQ A Sbjct: 487 NLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQLAY 546 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G QG+ +P P + Sbjct: 547 LALHGCTRFQGFYFSKPLPAIE 568 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 110/510 (21%), Positives = 200/510 (39%), Gaps = 34/510 (6%) Query: 252 TLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLY 307 L G+ + W V + Y + ++ + + Sbjct: 399 MLTSGREDAALDDAMWETVQRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVA 458 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + + + + H A DPLT LPN R L + + +DN Sbjct: 459 THIDITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDN 518 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE----GRLQ 415 + ++ G + + + + L +++ + + +L G E ++++ + +++ Sbjct: 519 FKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVE 578 Query: 416 HMVNILNSR---QIHW---------NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + N F + + LL Q Sbjct: 579 AVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMY 638 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 Q+ A+ + + T +V L +R A++ G LY QP + G + Sbjct: 639 QAKDSGRN-AIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAE 697 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVN 578 +L G++ P +F+PL + L VLE+ LAT +VN Sbjct: 698 ALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVN 757 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + Q + +++ + +PQ + LE+TE SN E + + L G + Sbjct: 758 VSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFS 817 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LKRL D +KID FV +++T+ DA I + I LA++ L+V+AE Sbjct: 818 LDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEG 877 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET++Q+ L + G QGYL +P PLA Sbjct: 878 VETEEQRNFLAESGCHAYQGYLFSKPLPLA 907 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 109/518 (21%), Positives = 210/518 (40%), Gaps = 32/518 (6%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + ++ + G V + + + R + W + ++ ++ Sbjct: 532 WTSEEVMGREVEMLYDNVAVFDEANRALLSSGEWRGELAQR--------RRDQSMLNVEA 583 Query: 294 ILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 ++ + + + + + AL D LT LPN R L Sbjct: 584 HWTLVRNDDGEPQAIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAV 643 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + + +DN + ++ G M +R + L ++E++ + +L G E + Sbjct: 644 SARNQRMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFV 703 Query: 403 LVL------SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 ++L E ++ + + S + + + + F+ +T Sbjct: 704 VILMGDFGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNE 763 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL + Q+ A A+ + + + +L + + + ++ + +L+ Q + Sbjct: 764 LLKRADLAMYQAKASGRN-AMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVD 822 Query: 514 KE-GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDK 570 G + ++ G++ P +F+P + L VLE+ LA+ + Sbjct: 823 SRGIIGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPET 882 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVN+ L Q + ++I + R +PQ + LE+TE + + ++ + L Sbjct: 883 VQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTL 942 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G A+DDFG GY++ LKRL D +KID FV+D++T+ DA IVR+I LAK+ Sbjct: 943 KARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSM 1002 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+V+AE VET Q+ L G QGYL RP PL Sbjct: 1003 GLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLE 1040 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 93/464 (20%), Positives = 176/464 (37%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T Y ++V+ + + + A DPLT L N + Sbjct: 738 RKDGTLYPKWMAVSVVRDADGVLTHYVASFTDITERKLAEAQIKHLAYHDPLTGLSNRFS 797 Query: 340 LEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ A ++ + L +D + ++ G + + + R L +++++ Sbjct: 798 LQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSD 857 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++VL+ + + L + L + + Sbjct: 858 IVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDG 917 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ + + ++ K++ + +R A++ G L+ Sbjct: 918 DDADALMKNADTAMYHAKSQGRDNV-QFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHY 976 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + ++ G+++P +F+P+ + L VL + L Sbjct: 977 QPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRL 1036 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL L + + R + + + LEITE A + +S+ Sbjct: 1037 WRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASI 1096 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ L G ++IDDFGTGY++ LK L D +K+D FV +I N D I + Sbjct: 1097 AQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATI 1156 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + L VVAE +ET+ Q+ LL ++QGYL P P Sbjct: 1157 ALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAE 1200 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 99/466 (21%), Positives = 187/466 (40%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + Y ++ + + + + + + R A D LT LPN Sbjct: 646 RRSGDIYPQWLTISTVFNDRNEPCNYVGVFTDITQIKQSEARLAHLAHYDALTGLPNRLL 705 Query: 338 ------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 A+E+ + L +D + ++ G + + + L ++E + Sbjct: 706 VQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREED 765 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGN 447 L +L G E L+VL + + L + + + + F + Sbjct: 766 TLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTD 825 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 ++ L+ + + +S ++++L +R AL G+ +L+ Sbjct: 826 ANSVTELIQHADMAMYLAKQEGRN-TYRYHTDALSIAANERLVLETQLRQALSAGEFVLH 884 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + + G + ++ D +++P KF+P+ + L VL + Sbjct: 885 YQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGR 944 Query: 565 TH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 D +VNL +N+ I ++ + + + LE+TE +AE S Sbjct: 945 AWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQS 1004 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++ L G R++IDDFGTGY++ LKR D +KID FV + + D I +I Sbjct: 1005 IEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATI 1064 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A+ L V+AE VE++QQ +L++ G Y QGYL RP P + Sbjct: 1065 IAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQE 1110 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 116/568 (20%), Positives = 212/568 (37%), Gaps = 31/568 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA----LSVLLLLLCTPYENDFIAGYL 243 R + +R + G + A+ +S + D + + Sbjct: 259 RSAEQLREQLLFIQRIASRIPGFIYEYRMHNDGASSVPYISDAVREFMGVNPEDVMRDHG 318 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + ++ + + ++ L + Sbjct: 319 LLMRSVVPDDAA----HVRRSAVASLRNLAPWQCEYRVSMPDGSVRWHITNAIPHREPDG 374 Query: 304 CLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 ++ + + A D LT LPN R L ++ + + Sbjct: 375 SVVSHGFTMDITDRKRAEQEIERLAFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALL 434 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP----- 408 + +DN + ++ G M H + + LL ++E + + + G E +++L Sbjct: 435 FIDLDNFKDLNDTLGHDMGDHLLSQVAARLLACVRETDTVARFGGDEFVVMLETLRPELT 494 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E + + + L + + F + ++ LL + Q+ Sbjct: 495 EAASQAEIVAEKLLASLNQPFALGGQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQA 554 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEIL 523 + + + L +R L +G+L +Y QP+ + G + ++ Sbjct: 555 KGAGRNTQ-RFFDPDMQAAVNARSNLEADLRQGLARGELCVYYQPVVDHRARLLGVEALV 613 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMP 581 G+++P F+PL Q L QVL++ L + SVN+ Sbjct: 614 RWRHPVRGMISPADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSA 673 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q +++ + P+ + LE+TE + E ++ +EQL + G A+DD Sbjct: 674 RQFRQPGFVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDD 733 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL D +KID FV+D++T+ DA IVR+I LA++ L VVAE VET Sbjct: 734 FGTGYSSLSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVET 793 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L G + QGYL GRP P+ D Sbjct: 794 TGQLAFLRLHGCEGFQGYLFGRPGPVED 821 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 95/465 (20%), Positives = 183/465 (39%), Gaps = 20/465 (4%) Query: 284 GVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y + ++ + + + + + A D LT LPN Sbjct: 225 KNGELYWASASISPITNGNEQITHFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLF 284 Query: 341 E--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENE 391 QA + L +D + ++ G + +++ L + + + Sbjct: 285 NELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRD 344 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +++L + + + + + L + F + Sbjct: 345 TVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDG 404 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ ++ + Q +++ + N++R AL + + LY Sbjct: 405 RDTETLIKNADMAMYRAKEQGRSR-YHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYY 463 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + + ++ + G++ P++F+PL L VL + T Sbjct: 464 QPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKT 523 Query: 566 HPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + R +VN P Q + + ++ ++P + LE+TE N E ++ Sbjct: 524 WQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTV 583 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G I+IDDFGTGY++ +K+L +KID FV DI TN DA I ++ Sbjct: 584 QTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVI 643 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A++ L+V+AE VET +Q LL L +QGYL +P P+A+ Sbjct: 644 TMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAE 688 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 113/466 (24%), Positives = 193/466 (41%), Gaps = 24/466 (5%) Query: 286 ETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + +L+ + V L VR + A DPLT LPN R L Sbjct: 660 GQSFPADVLLSSMKLDGRVVLQATVRDITERKKSESEIVRLAFYDPLTGLPNRRLLMDRL 719 Query: 345 EQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + + +DN + ++ G + + + + L ++E + + +L Sbjct: 720 QHALTSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARL 779 Query: 397 PGSELLLVLSGPET---------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 G E +++L + + ++ LN F + Sbjct: 780 GGDEFVVLLDNLSHGHDNAGAHTKRVAEKILQALN-LSYMLQGYEYHSSPSIGVALFCAD 838 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL + QS A + +E + L + + AL+Q L+LY Sbjct: 839 ASSPDELLKRADSAMYQSKAAGRN-TVRFYDERTQALLLARAELEHALHHALEQQQLMLY 897 Query: 508 AQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q N + G + +L G+++P +F+PL + + VLE L Sbjct: 898 YQVQVNADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKR 957 Query: 566 HPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 D +VN+ + + A ++ L ISP + LEITE + E+ Sbjct: 958 WASDVFKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENI 1017 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++QL K G ++DDFGTGY++ +KRL D +KID FV+DI + D IVR+I Sbjct: 1018 IATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTI 1077 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A++ L+++AE +ET+QQ+ LL G QGYL +P PL+D Sbjct: 1078 IAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSD 1123 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 103/530 (19%), Positives = 203/530 (38%), Gaps = 21/530 (3%) Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFF-IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 LS + T ++ + G + ++ + + Sbjct: 222 LSGNITFLNSVAEKLTGWQQNEALGRPIADILKVVDEITREPRGSTVERPNQ-LHRSTKA 280 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLT 332 N ++ +E + A ++ + ++ + + + A D LT Sbjct: 281 PSNSILVRRDGSELPIDESRAPILDRQGQIAGTVTVLHDVSVTRAMELKMAHLAQHDFLT 340 Query: 333 LLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN R L+ Q + + ID + ++ G M ++S+ L Sbjct: 341 DLPNRRVLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLT 400 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAW 441 ++ ++ + + G E +++L+ T + + S L + Sbjct: 401 TCVRASDTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGI 460 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + + L+ Q+ ++ + ++ L +++R AL++ Sbjct: 461 STCPNDADDAETLIKHADIAMYQAKEKGRN-NYQFFRADMNERVLQRQSLESSLRLALER 519 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + LL+ QP N G + ++ + G++ P F+ + L VL+ Sbjct: 520 QEFLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQE 579 Query: 559 LLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + + +VN+ + +K+ +I + + P+ + LE+TE Sbjct: 580 ACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLM 639 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 AE ++ + L G ++AIDDFGTGY++ L RL D +KID FV D+ T T +A Sbjct: 640 KEAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNA 699 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 IV +I + K+ +L+V+AE VETQ+Q ALL QGY RP + Sbjct: 700 AIVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSV 749 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 100/487 (20%), Positives = 197/487 (40%), Gaps = 26/487 (5%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRW 322 +W+ + + + E+ + + + M ++ + R Sbjct: 478 ETGSWSGEIINRRKNGEIYP-----EHLTITAVKDADGQTTNYVGMFTDISVAKAASERI 532 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A DPLT LPN R + L +D+ + ++ G Sbjct: 533 ENLAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDM 592 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLS-----GPETEGRLQHMVNILN---SRQI 426 ++ + L ++E + + +L G E +L++ E +++ + + + ++ Sbjct: 593 LLKQVALRLSNCVREGDSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPY 652 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + F+G+QE+ + LL Q+ L + ++ Sbjct: 653 QLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMYQAKKAGRN-TLRFFDPLMQETIN 711 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 +V L ++ A++Q LY Q N + G + ++ + GI++P +F+P+ + Sbjct: 712 MRVDLERELKKAIEQKQFELYYQVQMNSAGQPSGAEALIRWRHPERGIISPIQFIPVAEE 771 Query: 545 FNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L + VL L K ++N+ LQ + A ++ + +HI Sbjct: 772 TGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHI 831 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + LE+TE N E ++ + L + G + ++DDFGTGY++ + LK L +KI Sbjct: 832 DNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKI 891 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+D+ T+ + IV +I +A + L+V+AE VET +Q LL+ G QGY Sbjct: 892 DQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFS 951 Query: 723 RPQPLAD 729 P + + Sbjct: 952 EPLSINE 958 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 98/488 (20%), Positives = 177/488 (36%), Gaps = 19/488 (3%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSE 316 L AV LA + + + Sbjct: 586 PAVERLREAVREGGDARVTLRTYHKDGQLLWNEISLASIRDAQGEVSHFIAIFNDVTERV 645 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 QA D LT L N L + L +D + ++ G Sbjct: 646 RYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLG 705 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 ++ R L ++ + + +L G E ++V+S E + + + Sbjct: 706 HAAGDALLQETARRLSASVRRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEP 765 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + N + + + E LL ++ ++ + Sbjct: 766 MLLNGREIVATGSIGVSLYPRDGEAAATLLKHADVAMYRAKELGRNR-FQFYAPEMNERI 824 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ L N++R AL+ +L L+ QP + G + ++ G+++P F+PL Sbjct: 825 LERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLA 884 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L V++ + L +VN+ + + + R + Sbjct: 885 EETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHR 944 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P + +E+TE E +++ + +L G RI++DDFGTGY + LKR D IK Sbjct: 945 LPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIK 1004 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV D+ T+ DA I I LA + + +V+AE VE + Q L + G +QG+L Sbjct: 1005 IDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLF 1064 Query: 722 GRPQPLAD 729 RP P A+ Sbjct: 1065 SRPLPAAE 1072 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 106/514 (20%), Positives = 202/514 (39%), Gaps = 29/514 (5%) Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 P+ + L G ++ + L +Y G T ++ + + Sbjct: 184 GNPILDPVHPLDRGFVQGSIDEAIGKRAPLS-FDYRITLGGGERTLHAELVTVLDEQGEA 242 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCC 354 VCL ++ + + L A D LT LPN R Q EQ + Sbjct: 243 VCLTGTIQDITERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDRMLAVLF 302 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ------------LPGSELL 402 L +D + ++ G + ++ + LL ++ + L + L G E Sbjct: 303 LDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRLGGDEFT 362 Query: 403 LVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++LS E + + + S + + + + T L+ Sbjct: 363 IMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASDLIRNAD 422 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 Q+ +E ++ + ++++L + + AL + + ++Y QP + Sbjct: 423 GAMYQAKEQGRN-GYQIYDESMNAKALERIILESQLHKALKEEEFIVYYQPQVSNQSGRV 481 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRF 575 G + ++ + G++ P +FLPL + L + D V+ + Sbjct: 482 VGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGFPPVTL 541 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 ++N+ ++ + + + K + P + LE+TE ++ E ++ ++ L G Sbjct: 542 AINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQALKGMGV 601 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 R+AIDDFGTG+++ LKR D++KID F+ DI T+ DA I + ++A L V+ Sbjct: 602 RLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMAHTMKLKVI 661 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VET+ Q L K G QGYL +P P + Sbjct: 662 AEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTE 695 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 96/468 (20%), Positives = 181/468 (38%), Gaps = 17/468 (3%) Query: 278 NQNFLQGVETEYSLAFILAV-LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + + + L + + VR + + Q+ D LT L N Sbjct: 285 ETRHQRKDGRIFPVEVSASQCLFNNEENHVAFVRDITIRKKYEKELEHQSNHDALTGLAN 344 Query: 337 FRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L+ +Q + + L +D + ++ G + ++ L + Sbjct: 345 RVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACIS 404 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 + L +L G E +V++ + M + + N L + + Sbjct: 405 PGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYP 464 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + E + LL Q+ E + + K + L +R AL G + Sbjct: 465 RDGEQSEDLLRHADAAMYQAKKQGGN-GFQFCSEEMDTRAHKALELEGDLRQALQLGSFV 523 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ QP + + +G + ++ D G+++PD F+PL + L VL + Sbjct: 524 LHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQ 583 Query: 563 LATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + +VNL LQ + I + + I P + LE+TE + + Sbjct: 584 FKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPD 643 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + +L + GF +++DDFGTGY++ L+R D +KID F+ D+ ++ A + Sbjct: 644 RIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVAN 703 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 S+ +A + + +AE VET++Q A L +QGYL +P P D Sbjct: 704 SVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPAND 751 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 105/565 (18%), Positives = 215/565 (38%), Gaps = 31/565 (5%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYL-V 244 S ++ E++ ++ + + + L +P + Sbjct: 138 SIRSDITARKQMEDELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPD 197 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL------ 298 +F V R F + + + + + Sbjct: 198 EEIHNLFEWIVEDDRDIFAYAIQ--HAFSTRKEYMVECRINTQRNDVIWTESKINPIMDE 255 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGK 350 LL + R + H A D LT LPN R + QA ++ Sbjct: 256 EGNVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSL 315 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ +G + + + L ++ + + +L G E ++ + Sbjct: 316 AVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLD 375 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + R + ++ + + + + LL + + Sbjct: 376 RNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKS 435 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILA 524 D + + ++ +++L+ N +R A++Q +Y QP + G + ++ Sbjct: 436 RGKN-GYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVR 494 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + + GI+ P++F+P+ + + +L+ K + SVNL + Sbjct: 495 WVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQI 554 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 QK++ I + + +SP + LEITE E + ++Q+ G +I+IDDFGT Sbjct: 555 YQKDLVEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGT 613 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+++ +K L D IKID F++DI N IV++I +A++ +++V+AE +E Q Sbjct: 614 GYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQ 673 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 A L + G + QGYL +P P D Sbjct: 674 VAALKENGCDHGQGYLFSKPLPTDD 698 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 113/573 (19%), Positives = 209/573 (36%), Gaps = 32/573 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R + P + + + + + T+ L + + E D + P F Sbjct: 258 RCVRGPDNEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAF 317 Query: 248 FIIFTLGVGKL-RYP-------------FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + L + P + V L + YS Sbjct: 318 EAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEM 377 Query: 294 ILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK 350 + + + + + + + QA D LT LPN + EQ + Sbjct: 378 TVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQ 437 Query: 351 S--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + L +D + ++ YG ++ R L ++ ++ + +L G E + Sbjct: 438 AQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFI 497 Query: 403 LVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++LS E + ++ + S T + F + ET LL Sbjct: 498 VILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNAD 557 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGE 517 + ++ ++ + + + +R AL + + L+ QP + Sbjct: 558 VAMYHAK-QGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVRADLTLI 616 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 G + ++ + G++ P F+PL + L L + + + P S Sbjct: 617 GAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVS 676 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ P + + + ++ + P+A+ LEITE + E ++ + L G Sbjct: 677 VNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVT 736 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTGY++ LK D +KID FV+D++ + DA IV +I LA+ SVVA Sbjct: 737 LSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVA 796 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VE +Q L Q QG+L RP P A+ Sbjct: 797 EGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAE 829 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 112/517 (21%), Positives = 209/517 (40%), Gaps = 29/517 (5%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 Y D + G+ F + + + + A+++ + T Sbjct: 622 YVPDELLGHTPMEFMPV-----EDIPHVREIVNRAIASNTSFKLQHRDITKSGTLLWEEV 676 Query: 294 ILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 L+ + + A DPLT LPN R L + Sbjct: 677 NGVPFFDEHGELMGLRGTGMNITDRKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHALAS 736 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + +DN + ++ G + ++ + L ++E + + +L G E + Sbjct: 737 STRSGREGALLFIDLDNFKTLNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFV 796 Query: 403 LVLSGP-----ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 ++L E + + + + ++ F ++++ L Sbjct: 797 VMLEELSEQTLEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEEL 856 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 L Q Q+ L + + + LL + AL+ LY Q Sbjct: 857 LKQADIAMYQAKKAGRN-TLRFFDPQMQETVIARALLERELSKALENDQFQLYYQIQMTD 915 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDK 570 E G + ++ + + G++ P+ F+PL + L L VL++ + Sbjct: 916 LNEPFGAEALIRWIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNAST 975 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + +VN+ + Q + +I + +R+ I+P+ + LEITE ++ E ++ + L Sbjct: 976 RELVLAVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNAL 1035 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 K G + A+DDFGTGY++ + LKRL D +KID FV+DI T++ D IV +I +A + Sbjct: 1036 KKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSL 1095 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +L V+AE VET+QQ+ LL + G QGYL G+P P+ Sbjct: 1096 NLDVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPI 1132 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 123/666 (18%), Positives = 232/666 (34%), Gaps = 29/666 (4%) Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ----RLFWLGLVTPIGIKCSMYLV 143 ++L VL + +T + R WL + ++ ++ Sbjct: 62 IILDLVLVSVLIHTSGGAASWFWPAYLFVTIEASFLIEDRREVWLVGGLGGLLYGAVLVL 121 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLS-LFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 P F G + LL+ L+ ++L M M V + Sbjct: 122 EHLNIVPYVRMPFVGSELHHDHLYLLLTWLWVSLLNAAMAAIASYFMTVIRRETDAVREG 181 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY---LVPVFFIIFTLGVGKLR 259 + + + + + LL + + VP F I+ + Sbjct: 182 EERLATFLDTANDLIHSVTPDGRLLYVNEAWQRTLGYSAEEADAVPFFDILHPDSREQCC 241 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSEW 317 + + L F + L+ S + + R + Sbjct: 242 AELQRVVSGDA---LSPMEAVFTAKDGRSVIVEGSLSCAHGGDESSVIWSICRDITERKH 298 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGL 369 + + A D LT LPN +Q + L +D + ++ G Sbjct: 299 AEEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLDLDRFKIINDTLGH 358 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQI 426 + H ++ + + ++E + + ++ G E ++L +T ++ M + + Sbjct: 359 PVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAPF 418 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + L + F + + L L+ + + Sbjct: 419 NIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRNNV-QFYSPQMDANAD 477 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 K++LL ++R ALD + +Y QP + K + ++ G+++P +F+PL Sbjct: 478 KRLLLETSLRKALDNREFRVYYQPKVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAE 537 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L VL + R +VNL QKN+ I + + Sbjct: 538 ETGLIIPIGEWVLRAACFQNCEWVRQGIPPMRVAVNLSGYQFQQKNLLETIRGILDETGL 597 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + + LEITE N + ++ + QL G I+IDDFG GY++ LKR + +KI Sbjct: 598 TADLLELEITESVIMQNPDFAVSVLNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLKI 657 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+D+ N+ DA I +I + + +L V+AE VET+ Q + L +QGYL Sbjct: 658 DKSFVRDVEINSADAAIATAIIAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLFS 717 Query: 723 RPQPLA 728 P P Sbjct: 718 TPMPPE 723 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 104/508 (20%), Positives = 198/508 (38%), Gaps = 17/508 (3%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 F G + I G++ + ++ A+S N + + S+ LA Sbjct: 180 FAPGSALGRACICRDGVPGEVCNGYTDICQAISRGTEGYTVLNLERENGAQQSVELFLAP 239 Query: 298 LISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EA 348 + + S + ++ +R QA D LT LPN L Sbjct: 240 VENESGDVTHFIGVLNDVTARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGR 299 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ YG + IR + + ++ + + +L G E +++L Sbjct: 300 LTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDL 359 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + L S + + L + + + LL ++ Sbjct: 360 ASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRA 419 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + +++ + + +R AL G+L + QP + G + + Sbjct: 420 KERGRN-NYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEAL 478 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 + + ++ P +F+ + + L QVL + + + +VNL Sbjct: 479 VRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSG 538 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q ++ ++ + + LEITE A ++A+ S+ + L + G +AIDD Sbjct: 539 HQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDD 598 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR D +KID F++ I + D IV++I +A++ LS++AE VET Sbjct: 599 FGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVET 658 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ L G + QG+L GR P D Sbjct: 659 PAQREFLVAQGCRSGQGFLFGRAMPAED 686 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 104/444 (23%), Positives = 171/444 (38%), Gaps = 16/444 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + R + R QA D LT LPN + Sbjct: 382 DKITNYVGISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFA 441 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + ++ + + LL +E++ L + G E +++L Sbjct: 442 ILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGA 501 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + + E +Q LL ++ Sbjct: 502 EDAAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDS 561 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 E +S +++ L +R AL + + +L+ QP N G + ++ Sbjct: 562 GKND-YQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRW 620 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 D G++ P F+PL + VL + PR SVNL Sbjct: 621 DLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQF 680 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + N+ + R+ K +SP + LEITE N E ++ ++ L + G +AIDDFGT Sbjct: 681 KKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGT 740 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKR +KID FV+ I +N D I SI L K +L VVAE VETQ+Q Sbjct: 741 GYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQ 800 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 +L QGYL +P Sbjct: 801 LTVLRNYQCDEAQGYLFSQPVDAD 824 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 97/465 (20%), Positives = 187/465 (40%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y L + + + + + +R + A D LT LPN Sbjct: 468 RKNGEIYPLWVTANAVRNSKEEITHFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSL 527 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + +D +F++ G + ++ + + ++ + Sbjct: 528 FLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAED 587 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +++ + + + S + + L + + + Sbjct: 588 TIARLGGDEFTVIIENFTDTSAISLITQKIISACEKPFNIKGNELFVSASIGVSLYPEDG 647 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL + Q+ ++ T+Q+ L N +R AL + + LY Sbjct: 648 HEASMLLQRADAAMYQAKKRGKSCC-QFFTTEINTAATEQLALKNLLRRALARKEFQLYY 706 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI N E + ++ + + G+++P+ F+PL + L VL++ Sbjct: 707 QPIINMESGAIVSVEALIRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKI 766 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + R ++NL L Q + + R+ + K+ + LE+TE + ESS+ Sbjct: 767 WNQSNPYPVRIAINLSARQLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMESSL 826 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L K G R+++DDFGTGY+ LKR D +KID FV+ I + DA I ++T Sbjct: 827 KTLNTLKKMGCRLSLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVT 886 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + +V+A+ VET++Q L+++ V QGY I P P + Sbjct: 887 TMAHSLKRAVIAKGVETREQLNFLNEIKVDEAQGYFISYPVPAEE 931 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 118/633 (18%), Positives = 239/633 (37%), Gaps = 29/633 (4%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 R F + + + ++G L+ FF + ++ + L + Sbjct: 297 RNFGINGLVMFPLISMGEILGQISIVNLENKLFFYSETQLQLAQSIVDTTASALSNQLYM 356 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 +I +++ + + ++ L S + + + Sbjct: 357 EKQEIIIEERTSEVRDKNKELERVVAELQQLSREKELILNSAGEGIFGLDLDRNITFCNP 416 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVS----------TLCLLNYNQNFLQGVETEYSLAF 293 + + + + N + F + + + + + Sbjct: 417 AGALMLGYETDRELIGQSVEIIMSGCEAEDNMTVSPFLNANFNSYEVFFRKDHSNFPVEY 476 Query: 294 ILAVLISFSVCL--LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 + +++ + + + + + L + A D LT LPN L Q Sbjct: 477 VTSLIKEGDKVVGEVITFKDITQRKQLEEKIKYHAYFDSLTDLPNRVLLIDRLTQGLKYA 536 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G ++S+ + L + E+ + + G E + Sbjct: 537 KVNGEKLAVLYLDLDRFKLVNDSLGHSYGDLLLQSVAKRLSACVPEDATVSRQGGDEFTI 596 Query: 404 VLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 L + E + ++N +N S+ + + + + F N +T + L+ Sbjct: 597 YLPNIKCENDILKVINCINASFSQPFNLIDNEIYIKTSIGISLFPKNGDTTETLIKNADT 656 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 +S + E + +T + + L N + AL++ +L+++ QP N + + Sbjct: 657 AMYKSKET-PGTSYHFFSEGMDTRTFESIKLENDLYKALERDELIIFYQPQINYKTNKIK 715 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 G + +L + G++TPD+F+PL + L VL+ K L S Sbjct: 716 GVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEWVLKEACKQLKEWHNQGYPLISMS 775 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q N+ I + +SP+ + LE+TE N E ++ + QL+ G Sbjct: 776 VNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLELTENLIVKNTEVTLKTMTQLNGLGVN 835 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ LK L +KID FV++++T+ A I +I LA+ L V+A Sbjct: 836 LAIDDFGTGYSSLGYLKNLPISTLKIDKSFVQEMLTD-DAAAITNTIITLAQNLKLEVIA 894 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L + +QGY +P + Sbjct: 895 EGVETKEQADYLLEQNCHLMQGYFFSKPMKAGE 927 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 109/604 (18%), Positives = 212/604 (35%), Gaps = 35/604 (5%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA-----QILWRRDIAPSLGKEK 212 + + ++ ++ +L+ R V + A + Sbjct: 338 PNTLNTRWIAFGVAATLLCVMLVILWNVQMRRQVRMRTEALHAEIARREQTEAYLKISSR 397 Query: 213 RAFTLSWLAAL-------SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 A SW+ +L S +L + F+ ++ Sbjct: 398 MARVGSWVLSLPEKTLYWSEEVLDIHECPPEFAPTLDSALAFYP--EEWRSRIVQALEEC 455 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + + L + ++ + R Sbjct: 456 LQKGDSFDEELPILTCKDKLLWIRIIGQAVYDLHGNITRIEGAIQDISAQKVAESRIQHL 515 Query: 326 ALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN + E + + +DN + ++ G + ++ Sbjct: 516 AFYDSLTSLPNRQLFIDRLEHTLAYSARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQ 575 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN---SRQIHWN 429 + + ++E++ + + G E +++L E + + + + + ++ Sbjct: 576 QVAMRIAGCLRESDTVARFGGDEFVVLLHELSGNHQEAAAQARLVSEKILISFAHPFQFS 635 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 FD T+ +L + QS A + + + + +V Sbjct: 636 GYEHHTSASIGVTLFDQQPTTVDEILKRADLAMYQSKAAGRNV-IRFFDPEMQALIADRV 694 Query: 490 LLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + +R L + L QP + +G G + +L G++ P F+PL L Sbjct: 695 EMEEDLRNGLRNDEFFLCYQPQVDNQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGL 754 Query: 548 SARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 V+ + K L +VN+ L Q + +I+ + +P+ Sbjct: 755 IVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPK 814 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE +N E + + +L G +IDDFG GY++ LK L D +KID Sbjct: 815 RLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQS 874 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+D++T+ DA+I R+I L K+ +L V+AE VET Q+ L G QGYL +P Sbjct: 875 FVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPV 934 Query: 726 PLAD 729 P + Sbjct: 935 PADE 938 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 128/688 (18%), Positives = 250/688 (36%), Gaps = 65/688 (9%) Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG---LVTPIGIKCSMYLVGSFFD 148 + A+ + +TS RL WLG + +GI ++ F Sbjct: 9 FWLVSLSVFIAVTAAYTSFSFASRITSTSGKIRLLWLGGGSVAMGVGIWSMHFIGMLAFR 68 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI---------- 198 P + D+ + ++L+ ++ + RM P Sbjct: 69 MPFPVH------------YDVRTTLLSLLMAIVVSGFALRMTSLPRIGPANLLMAGTLMG 116 Query: 199 ----------LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY--ENDFIAGYLVPV 246 + ++ ++ + LS L A+S L +D + Sbjct: 117 LGIGAMHYTGMMAMEMPMAIRYDPFLVFLSILIAVSASTAALRIVSTLRSDVAVADMPKK 176 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 F +G + + A + L + ++ LA + ++ L+ Sbjct: 177 FLSALIMGAAISGMHYTGM--AAARFPLRMSGTPLKNSSDAWLAVTIGLASFMILAIGLI 234 Query: 307 YMVRIYH----------RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS----- 351 + H + N + H AL D LT LPN LE +Q + Sbjct: 235 LSLVDSHLATRTAGLVGSLKAANEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDG 294 Query: 352 ---FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 L +D + ++ G ++ + R L + + + ++ G E ++V Sbjct: 295 AFSVFFLDVDRFKPINDSLGHSTGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQ 354 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + G++ + + + + + L + F + T + LL + Sbjct: 355 KDPGKVHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYA 414 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + + ++ ++ + N +R +++ + +LY QP E E + + Sbjct: 415 KSKGSGQ-IQFYSGELNDSAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEAL 473 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 + + GI+ P F+P + L +++ + R +VNL Sbjct: 474 VRWNHPEKGILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSA 533 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + +++ I+ + + P+ + LEITE + E +M + + + G +AIDD Sbjct: 534 LQFINQDLMKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDD 593 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY+++ LK+ D +KID F+ DI N DA IVR+I L +L V+AE VE+ Sbjct: 594 FGTGYSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVES 653 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q Q +L + QG+ RP P + Sbjct: 654 QAQLEMLKAMECDAYQGFFNSRPLPPGE 681 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 93/431 (21%), Positives = 180/431 (41%), Gaps = 16/431 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + +R A D LT LPN L EQ + + + +D+ + ++ Sbjct: 440 EGKEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTIND 499 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + ++++ L ++ + + + G E ++VL+ + + Sbjct: 500 SLGHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSF 559 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + H + L + F + + LL + + + ++ Sbjct: 560 ALPFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRN-NYQFFTDELN 618 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 ++ +L +R AL++ +LLLY QP+ + G + +L + ++TPDKF+ Sbjct: 619 KSAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFI 678 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 L + L V+ ++ + PR ++NL K++ I R+ Sbjct: 679 NLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILS 738 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + + LEITE N E + + +L G I+IDDFGTGY++ LK+ Sbjct: 739 ETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIH 798 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+VT+ D IV +I +A + + V+AE +E ++Q L + QG Sbjct: 799 TLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQG 858 Query: 719 YLIGRPQPLAD 729 Y +P +++ Sbjct: 859 YYFSKPVTVSE 869 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 94/470 (20%), Positives = 187/470 (39%), Gaps = 18/470 (3%) Query: 277 YNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 Q L+ + ++ AV+ + L + + + A D LT L Sbjct: 223 SEQCLLRRDGSRITVLSCHAVVRRPGEAPELYGLDIDISERKINEEQLEYLATHDELTGL 282 Query: 335 PNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N EQ + L +D + ++ G + ++ + L + Sbjct: 283 ANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGHSFGDRLLSAVAQRLDRV 342 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 +++ + + +L G E +L+L+ + + + + + + M Sbjct: 343 VRDTDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIVMSASLGISL 402 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + L+ ++ + ++ + + + + + +R AL++G+ Sbjct: 403 YPKDSGDGSTLIRNADIAMYRAKQEGGGV-FSFYAPEMNQRAMETMEIESALRLALERGE 461 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LY QP + G + ++ L G++ P F+PL + L VL+ Sbjct: 462 FTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVLKEAC 521 Query: 561 KWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + + + +VNL ++ G + + + P + LE+TE ++ Sbjct: 522 RQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMAD 581 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + +E+L G R+++DDFGTGY+++ L + +KID F+K IVT+ A I Sbjct: 582 HAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATI 641 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 SI +A L +AE VET+ Q A L K G +QGYL+ RP P ++ Sbjct: 642 ATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASE 691 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 107/486 (22%), Positives = 201/486 (41%), Gaps = 25/486 (5%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRW 322 +W + +LQ + +++ + + + + + + Sbjct: 422 TQGSWQGEIFNKRKNGEEYLQWTM----ITAVISDHEDEIINYVITLIDITQRKAAESKI 477 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT LPN + L + + L +D+ + ++ G Sbjct: 478 KQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGDK 537 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-GRLQHMVNIL-------NSRQI 426 + + + LL ++ + + ++ G E +++L +++ ++L S+ Sbjct: 538 FLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKPY 597 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + +N F G + + LL Q+ + + Sbjct: 598 YIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRN-THRFFNPEMQAKVL 656 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + + N IR AL + + LY QP + + G + ++ G ++P +F+P+ + Sbjct: 657 EHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHPKQGTISPIEFIPIAEE 716 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L VL+ + LA ++N+ Q +++ +RY Sbjct: 717 TGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRA 776 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 +P + LE+TE + E ++ + QL K+G ++DDFGTGY++ LKRL D +KI Sbjct: 777 NPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKI 836 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+D++TN+ DA I R+I LAK+ +L+V+AE VETQ+Q+ L G QGYL Sbjct: 837 DKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFS 896 Query: 723 RPQPLA 728 RP PL Sbjct: 897 RPVPLE 902 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 110/580 (18%), Positives = 217/580 (37%), Gaps = 35/580 (6%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + Y + R + + RDI+ E++ LS S + I Sbjct: 332 PVEYSVGRWREAGRNFFSVAARDISKRKQSEEKLRHLSQAVEQSPA---DVVITNAEGII 388 Query: 241 GYLVPVFFIIFTLGV-------------GKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVE 286 Y+ P F + G+ + W +S + Sbjct: 389 QYVNPRFSQVTGYASKEVIGKKPSILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDG 448 Query: 287 TEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF------ 337 + + I++ + S + + + R QA D LT LPN Sbjct: 449 SLFWQHAIISPIRDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDR 508 Query: 338 --RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +A+ QA + L +D+ + ++ G ++ L+ ++E + + + Sbjct: 509 LKQAIAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVAR 568 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E +L+L + + + + + + F ++ Sbjct: 569 LGGDEFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPI 628 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ +S + ++ + + + + + +R A+++ ++ ++ QP+ Sbjct: 629 LLMRNADAAMYRSKREGKGV-FRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLV 687 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G + +L G ++P++F+PL + L VL + + A+ Sbjct: 688 DSGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRP 747 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ ++ + + + P + LE+TE + + ++ I++ Sbjct: 748 DHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQE 807 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G AIDDFGTG+++ L+R D +KID F+KD+ N DA +V+SI +A + Sbjct: 808 LESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANS 867 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 SL VV E VET Q+ L G QG+L RP P D Sbjct: 868 MSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKD 907 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 99/464 (21%), Positives = 176/464 (37%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + + + + R A D LT LPN Sbjct: 396 RRSGEIYPEWLSITAITEGDGGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPNRLL 455 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + L +D + ++ G + +R + + L ++E + Sbjct: 456 LQDRLGQAILKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETD 515 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E ++VL E + + + L + + G+ Sbjct: 516 TVARQGGDEFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDG 575 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL ++ A ++ + ++LL + +R ALD+ +L LY Sbjct: 576 ADPSMLLRNADAAMYRAKADGRN-GFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYF 634 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + EG + +L D G++ P +F+P + L VL + L Sbjct: 635 QPKVNAADGCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRA 694 Query: 566 HPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL ++I + + + + LE+TE + E ++ Sbjct: 695 WIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTI 754 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G +AIDDFGTGY++ L++ + +KID FV DI + D I ++ Sbjct: 755 ATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVI 814 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA L+V AE VET QQ L + G LQG+L G+P+P Sbjct: 815 ALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAE 858 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 110/550 (20%), Positives = 206/550 (37%), Gaps = 28/550 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-------LLCTPYENDFIAGYLVPVFFI---IFTLGV 255 E R T+ ++ + L+ D +PV I + + GV Sbjct: 401 ELAESEGRFRTIFDHVNDAIFIHRADTGRLLMVNQRMRDMYGMGDLPVDRIDVGMCSAGV 460 Query: 256 GKLRYPFLNL---TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIY 312 + A +++ L G ++ LA LL +VR Sbjct: 461 SPYGAAEAQVWLRAAAAGQPQQFDWHARRLDGSLFWVEVSMRLARFSDGQNRLLVVVRDI 520 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 + R A DPLT LPN L+ + + L +D + ++ Sbjct: 521 TERKNAQDRLEFMAHHDPLTELPNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVN 580 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 G ++ + L ++E++ + +L G E ++VL+ + + ++ Sbjct: 581 DSLGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKS 640 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + I + F + L+ + + + Sbjct: 641 VAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAAMYHAKESGR-STYRFFAARM 699 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + + L + + AL++G+ LY QP + G + ++ + G+++P +F Sbjct: 700 NADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEF 759 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ L VL + A +VNL L + ++ + + Sbjct: 760 IPVAEDSGLIVPMGDWVLRQACRQAALWQAGGHALTMAVNLSALQFRRGDLERAVREALE 819 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++P ++ LE+TE + E+ M +L G +++IDDFGTGY++ LKR D Sbjct: 820 ESGLAPHSLELELTESIMIQDHEAVMDMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVD 879 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+ T+T +A I ++I +A + L V+AE VE + L G QG Sbjct: 880 KLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQG 939 Query: 719 YLIGRPQPLA 728 +L GRP Sbjct: 940 FLYGRPMTAQ 949 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 97/465 (20%), Positives = 177/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + + R + R A DPLT LPN R Sbjct: 383 RKTGEVYPQLLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRL 442 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + + +D + ++ G + + I L +++++ Sbjct: 443 LDDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDD 502 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ G E L+VL+ M + R ++ L + + + Sbjct: 503 TVARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDS 562 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L+ ++ + E ++ ++ +++ L + AL + +L LY Sbjct: 563 RDADTLVKHADVAMYRAKDEGRN-SFQLFEPAMNARSLERLALETALHRALPRDELQLYF 621 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP+ E + +L D G+++P F+PL L VL S + Sbjct: 622 QPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRR 681 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 VN+ ++ A + + ++P + LE+TE + + ++ Sbjct: 682 WCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRAL 741 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ L G +AIDDFGTGY++ LKR D +KID +FV+ I NT DA +V +I Sbjct: 742 ARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIV 801 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L + L VVAE VET +L + G QG+ P P + Sbjct: 802 SLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEE 846 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 111/573 (19%), Positives = 204/573 (35%), Gaps = 32/573 (5%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV--LLLLLCTPYENDF 238 F L+R I A+ R +E T + A L + + ++ Sbjct: 595 PRFIVLSRDITERKQAEEALRIAATAFESQEGMTVTDAQGAVLRINRAFTEITGYSADEV 654 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + + ++ + Y + + Sbjct: 655 VGH------NPRLLQSGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAV 708 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + R + A D T LPN R L Sbjct: 709 KENGGIVTHYVGTFMDITRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHR 768 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +DN + ++ G ++ + + L + E + +L G E +++L Sbjct: 769 RQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLEN 828 Query: 408 PE-----TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + + + + + + + F QET + LL + Sbjct: 829 LSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRAD 888 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--E 517 Q+ A L + + T + L +R A+ + LLY Q + +G Sbjct: 889 LAMYQAKAVGRN-TLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQGHLT 947 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRF 575 G + +L + G++ P +F+ L L VL++ LA + Sbjct: 948 GCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTV 1007 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ Q + +++ + +PQ + LE+TE + E + + L + G Sbjct: 1008 AVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGV 1067 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++DDFGTGY++ LKRL D +KID FV++I+ + DA I R + L + L+V+ Sbjct: 1068 GFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVI 1127 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE + Q+ L +LG QGYL RP PL Sbjct: 1128 AEGVEIEAQRDFLARLGCHACQGYLFCRPLPLD 1160 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 98/472 (20%), Positives = 183/472 (38%), Gaps = 24/472 (5%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRW----HLQAL---T 328 + + Y + S+ ++ R Sbjct: 303 HEHLRAGHEKRTYEIKASPLYNEDHSIRGIIETSRDLTDILNSEAELNEKTQHLQFVTTH 362 Query: 329 DPLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN E+ K + + +D + ++ G + ++ + Sbjct: 363 DQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVA 422 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 + L +++ + L ++ G E L+++ + + + + L + Sbjct: 423 KRLSTSIRKTDTLARMGGDEFLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGHELFITP 482 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + + LL Q+ ++ + ++ L + +R Sbjct: 483 SMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKC-QFYTAEMNSRAKTRIELESYLRK 541 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A++Q +LY QP + E G + +L G+++P+ F+PL + + Sbjct: 542 AVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEW 601 Query: 555 VLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL+ R +VN+ P + I R+ + I P+ + LEITE Sbjct: 602 VLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITE 661 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + +S++ ++QL G +AIDDFGTGY++ LKR +KID FV+DI T+ Sbjct: 662 SLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTD 721 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 DA I +++ LA + +L VVAE +ETQ+Q L + G + QGYL P Sbjct: 722 DNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPV 773 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 94/465 (20%), Positives = 179/465 (38%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 Y + + V + + R + H A D LT LPN Sbjct: 449 HKSGRIYPKWMSITAVRDEHGKVVNYISIARDTTEQTEAEKNIHFLAYYDVLTGLPNRTL 508 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + S L +D ++++ G + ++S+ + ++E + Sbjct: 509 LRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGD 568 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +++L E + L + + + + Sbjct: 569 TVARLGGDEFIVLLREAG-ESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQA 627 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ ++ ++ + + +R AL++G+L L Sbjct: 628 QDADTLIKNADMAMYRAKEEGRN-NFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQY 686 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ G ++P +F+P+ + VL + +A Sbjct: 687 QPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAE 746 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL L Q ++A I + + + + LEITE + +++ Sbjct: 747 WRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAF 806 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + ++ G +++IDDFGTG+++ LK++ + +KID F++DI T+ DA I+RSI Sbjct: 807 RFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSII 866 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L +L V+AE VETQ+Q L G +QGY RP D Sbjct: 867 SLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAED 911 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 105/464 (22%), Positives = 191/464 (41%), Gaps = 18/464 (3%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T Y +++L + + + A D LT LPN Sbjct: 579 RKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHIRHMAEHDFLTDLPNRAL 638 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + Q + + L +D+ + ++ G ++ + + L ++ ++ Sbjct: 639 IHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSD 698 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +L++ + + L R + L + F N Sbjct: 699 TVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNG 758 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LQ LL + A ++ Q +++ L N +R AL++ L L Sbjct: 759 SELQELLVSADLAMYHAKAQGRNR-YQFFTPELNAQVAERLTLENHLRQALERQQLYLVY 817 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N+ G + +L + G+++P +F+PL + L VL+ + A Sbjct: 818 QPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAA 877 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R +VN+ L Q ++ + R+ + + LE+TE +AE ++ Sbjct: 878 WLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVR 937 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +++ + G +A+DDFGTGY++ LKR D+IKID FV ++ N DA IV +I Sbjct: 938 HLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQ 997 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA+A + +AE VE+++Q L + G +QGYL GRPQ + Sbjct: 998 LAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGE 1041 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 111/465 (23%), Positives = 202/465 (43%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 ++ +++++ + + + R H A D LTLLPN + Sbjct: 757 HKEGFDFPKWLMMSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLS 816 Query: 340 LEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ E + + + +D+ + ++ G + + + R L +M ++ Sbjct: 817 LQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDD 876 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++VLS + + + L S + +N L F + Sbjct: 877 IVARLGGDEFVVVLSDTDHDRVA-KVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDG 935 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++++ L+ ++ A ++ T++ + +R A+ +LLLY Sbjct: 936 DSVEALMKNADMAMYRAKAAGRN-NYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYY 994 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + ++ + G++ PD+F+P+ + ++ VLE+ L LA Sbjct: 995 QPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAE 1054 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 KG R +VNL L + I II + ++ + A+ LEITE A E + Sbjct: 1055 WRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNA 1114 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L + G +AIDDFGTGY++ LK L D +K+D FVKDI ++ DA I + Sbjct: 1115 KLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATI 1174 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L+VVAE VE + Q LL +G +QGY +P D Sbjct: 1175 SMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 105/495 (21%), Positives = 197/495 (39%), Gaps = 19/495 (3%) Query: 252 TLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LY 307 L G+ F W A+ + + + Y+ + + + S + + Sbjct: 238 LLASGRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIA 297 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + R A DPLTLLPN L+ + + L +D Sbjct: 298 IYAEITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDR 357 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G ++ H ++ + + L ++E++ + + G E +++L ++ + H+ Sbjct: 358 FKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAG 417 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + I N L++ + F + L+ +S A Sbjct: 418 KIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQ-FQF 476 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMT 534 ++ +++ L N + A+++G+ L QP + G + +L G++T Sbjct: 477 FTADMNAHALERLALENDLHRAVERGEFRLMFQPQFEGSGSIIGAEALLRWQHPQRGLVT 536 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ + L VLE + + SVN+ L QKN+ I Sbjct: 537 PAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELI 596 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 RL +I P + LE+TE + ++ + +L + G R+AIDDFGTGY++ L+ Sbjct: 597 RRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLR 656 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 +KID FV+D+ I +I LAK ++ V+AE VET QQ + L Sbjct: 657 SFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCC 716 Query: 714 QYLQGYLIGRPQPLA 728 QG+ +P Sbjct: 717 DEFQGHFFSQPVSPE 731 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 99/471 (21%), Positives = 193/471 (40%), Gaps = 24/471 (5%) Query: 281 FLQGVETEYSLAFILAVLISFSVCLLY-MVRIYHRSEWLNRRW-------HLQALTDPLT 332 +++ ++ L ++ ++Y +VR + + H QA D LT Sbjct: 334 YIRADGEKFLAEVTLTPIMLGKRHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALT 393 Query: 333 LLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN E + + +DN + ++ G + + + + L Sbjct: 394 GLPNRTLFSDRLEHGLKLAERHLGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLK 453 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAW 441 +++ + L +L G E +++ + ++ + + + +H L + Sbjct: 454 AKIRQEDTLARLGGDEFTIIMENFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGI 513 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + + L+ ++ ++ ++V++ ++R A+ Sbjct: 514 SFYPQDTQNANDLVKYADAAMYKAKEEGRN-NFQFYSTEMTTLAYERVVMEASLRQAIKN 572 Query: 502 GDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + +LY QP N + G + ++ G++ PDKF+PL + L D V+ + Sbjct: 573 EEFILYYQPQVNAQTSRMTGMEALIRWEHPHLGMILPDKFIPLAEESGLILEIDRWVMRT 632 Query: 559 LLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 +K + P S+NL L +N I P+ + E+TE Q Sbjct: 633 AMKQVREWYARGLDPGVLSLNLSMRQLKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQMM 692 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 + ++ ++ ++ G IAIDDFGTGY++ LKRL +KID F+ I + +A Sbjct: 693 KRPDDAVASLGEIKSMGISIAIDDFGTGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENA 752 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV++ LAK+ SLS++AE VE ++Q+ L G +QGY GRP Sbjct: 753 AIVKATIALAKSLSLSIIAEGVENEEQKEFLLFNGCISMQGYYYGRPMTAD 803 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 103/483 (21%), Positives = 194/483 (40%), Gaps = 19/483 (3%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWL 318 + A++ ++ + + +A + + + ++ Sbjct: 537 IAAIRQALAANREVSAVLRNYRKDGALFWNQLYIAPVPDADGQTTHHIAVINDVTALIRY 596 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + QA D LT LPN L G + + +D + ++ G Sbjct: 597 QEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHS 656 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ---HMVNILNSRQIH 427 + + + L + ++ + + G E ++V++ E L V S + Sbjct: 657 VGDRLLSVVADRLARCARASDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASISEPVW 716 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + T L +G F + + + L+ + ++ + ++ Sbjct: 717 LDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRN-TFQFYQPEMNVSAGA 775 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L +R AL + LL+ QP + + G + ++ + G++ P +F+P+ + Sbjct: 776 RLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEE 835 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL + + P R SVNL Q++IA ++++ + + Sbjct: 836 SGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLD 895 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 PQ + LE+TE NAE ++ + +LH G +AIDDFGTGY++ LKR D +KID Sbjct: 896 PQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKID 955 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV DI ++ D I +I LA + +L V+AE VET Q L + +QGY + Sbjct: 956 RSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAK 1015 Query: 724 PQP 726 P P Sbjct: 1016 PLP 1018 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 111/587 (18%), Positives = 222/587 (37%), Gaps = 34/587 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 +I + Y ++ P + E + ++ A +L+ + Sbjct: 538 GTVIDVEISGYPLQLHGKPALFNSSRDITERKKIEVEIQIAATAFEAQEGMLITDADRNI 597 Query: 230 LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L I GY + + + + + Sbjct: 598 LRVNRAFTDITGYSAEEVIGKNPRILSSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNG 657 Query: 287 TEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y + + + + + + A DPLT LPN R L Sbjct: 658 EVYPERLAITAVKDARGVVINYVASLSDITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDR 717 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +Q + L +DN + ++ G + ++ + + L ++E + + + Sbjct: 718 LQQALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVAR 777 Query: 396 LPGSELLLVLSGPETEGRLQ---------HMVNILNSRQIHWNNTGLDMGYGAAWGRFDG 446 + G E +++L E +++ LN + H + FD Sbjct: 778 IGGDEFVVMLEDLSAESIEAASQTEAVGWKIISTLN-KPYHLEKFEVHSTPSIGATLFDS 836 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + L Q Q+ + + + + L +R ++++ + L Sbjct: 837 RPQIIDDLFKQADIAMYQAKKAGRN-TMRFFDPQMQDTLNTRTALEADLRKSIERREFNL 895 Query: 507 YAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 + Q + G + ++ + G+++P +F+PL + +L L VL+ L Sbjct: 896 FYQIQVDEMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLK 955 Query: 565 THPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 T + + +VN+ Q + A ++ ++Y I P + LE+TE N E Sbjct: 956 TWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIED 1015 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ + L + G + ++DDFGTGY++ + +K+L + +KID FV D+ + D IVR+ Sbjct: 1016 TILIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRA 1075 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +AK+ L V+AE VETQ+Q+ LL G + QGYL +P P+ + Sbjct: 1076 IIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIRE 1122 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 125/697 (17%), Positives = 239/697 (34%), Gaps = 43/697 (6%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 + L + G + I G + R + Sbjct: 337 FGGMKMAWIGMLDEADQLIKPAASFGSGVEYLE---GIEISVDLSGDKGRGPTGTSIRED 393 Query: 124 RLFWLGLVT---PIGIKCSM---YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 R FW + G+ PL + FT+ + Sbjct: 394 RPFWCQDFQHDDATAAWHERGERFGWGASASLPLHLK---DRVIGAFTLYAGEACAFDEA 450 Query: 178 IYNMLFYYLTRM-IVSPHFAQILWRRDIAP-SLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 N+L + FA R+ + E+R + +V + L Sbjct: 451 AQNLLLEMALDISFALDRFADERERKIMQDDLRDSEERYRKAFQTSPDAVNITRLVDGLY 510 Query: 236 NDFIAGY-----------LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 D G+ + + G R ++ + N F++ Sbjct: 511 VDVNTGFERITGWRHDEVVGKTATELNLWGNPADRMRLVDALQSEGRCN--NLEATFVKK 568 Query: 285 VETEYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + + V C+L + R + + A D LT LPN L Sbjct: 569 NGDIFHGLMSAEKVRFKDVDCILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDR 628 Query: 344 --------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + L +D+ + ++ G + + + R L ++E + L + Sbjct: 629 FRYALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSR 688 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 L G E +L+L G + Q +L + + L + + + + Sbjct: 689 LGGDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFET 748 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 L + + + + + + L+N +R AL + + L+ QP Sbjct: 749 LSKNADAAMYRVKQASRND-FRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVA 807 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + +L + G+++P +F+P+ VL + ++ L Sbjct: 808 LQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAG 867 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + +VNL + N+ + R+ + P+ + LE+TE A + +++ + + Sbjct: 868 LRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNK 927 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G R++IDDFGTGY++ LK+ + + +KID FV+DI + D IV +I +LA + Sbjct: 928 LDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASS 987 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + +AE VET Q A L G +QGY + +P P Sbjct: 988 LGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLP 1024 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 104/466 (22%), Positives = 191/466 (40%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 Q + + V+ + +L + A D LT LPN Sbjct: 582 QKNGNGFDVELQAQVVKDQNGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTL 641 Query: 340 LEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ A + L +DN + ++ G IRS+ L + + Sbjct: 642 LKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCD 701 Query: 392 KLYQLPGSELLLVLSGPET----EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 L + G E +L+L+ + + + +L R + ++ + + Sbjct: 702 TLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQD 761 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + + LL + ++ + ++ Q ++ + +R+AL +G++ L Sbjct: 762 GQDPETLLKRADTAMYEAKKNGRN-GYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLV 820 Query: 508 AQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + +L + G ++P +F+PL + L VL+ + A Sbjct: 821 YQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGA 880 Query: 565 THPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + +VNL Q ++A I ++ + +SP + LEITE N E++ Sbjct: 881 IWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAA 940 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +L K G + +IDDFGTGY++ LK+L D IKI FV+DI T+ D I+++ Sbjct: 941 IEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKAT 1000 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AK+ + ++AE VE QQ A L G +QGY +P P + Sbjct: 1001 IAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 95/501 (18%), Positives = 191/501 (38%), Gaps = 19/501 (3%) Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 F L + L + + + + LA + Sbjct: 382 LSPRFLLANDLAQPGLERLRNCMRHGGSARAILRNYRKDGSLFWNEVALAAVHNEHGEIA 441 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 + + + QA D LT LPN L E + L Sbjct: 442 HFISVFNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHTKLAVLLL 501 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + I+ + + +++++ + +L G E +++ + E Sbjct: 502 DLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDIRDERAAA 561 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L + ++ N + F + + L ++ Sbjct: 562 TLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRAKDVGRN- 620 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 ++ + +++ L ++R A+ L L+ QP + + + ++ Sbjct: 621 GFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHPQ 680 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKN 588 G+++P F+P+ + L V+E + LA + R ++N+ L Sbjct: 681 LGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAYQLSHGK 740 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++I+ + PQ++ +E+TE + ++ ++ L + G R+A+DDFGTGY++ Sbjct: 741 LTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYSS 800 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR DI+KID FV DI + IV++I +LA +++VVAE VET+ Q L Sbjct: 801 LTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEFL 860 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 G +QGY +P P + Sbjct: 861 RTNGCDEVQGYYFCKPLPSEE 881 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 101/468 (21%), Positives = 193/468 (41%), Gaps = 24/468 (5%) Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + Y + +A I + + + + + + AL DPLT LPN R L Sbjct: 778 KDGSLYWVDTTIAPFIGDDGKPQSYISIRTDITQRKAAEDKSNYLALYDPLTNLPNRRLL 837 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 G + L +D+ + ++ G + ++ + L ++E + Sbjct: 838 LDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDT 897 Query: 393 LYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRF 444 + +L G E +++L G E + + + + + + + F Sbjct: 898 VARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLF 957 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 N LL Q Q+ AL + + +V + + +R ALD+ + Sbjct: 958 GKNNLKSDELLKQADIAMYQAKKLGRN-ALSFFDPKMQEGIQARVDMEHELRKALDKNEF 1016 Query: 505 LLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ Q + G + ++ + + G++ P++F+ + + V+++ Sbjct: 1017 QLFYQMQVGLSDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQ 1076 Query: 563 LATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L + SVN+ Q + ++ R+ I+P + LE+TE + Sbjct: 1077 LKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHI 1136 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E ++ + L G R ++DDFGTGY++ + L+ L +KID FV+DI ++ + IV Sbjct: 1137 EDAVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIV 1196 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 R+I +A +L+V+AE VETQ QQ +L G + QGYL P P+ Sbjct: 1197 RTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPID 1244 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 101/451 (22%), Positives = 184/451 (40%), Gaps = 16/451 (3%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PE 345 +L L + + +RI + + QA DPLT LPN L Sbjct: 178 LLEELANNLAHGILSLRIMAEHKRYEEQLAYQATHDPLTALPNRNLLADRISQALAWAQR 237 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D +F++ G ++ + L +++ + L G + ++VL Sbjct: 238 HRRWIAVLFVDLDFFKFVNDSLGHGKGDQLLKMVAERLSERVRQVDTLAHQGGDKFVVVL 297 Query: 406 SGP---ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + E R H++ S + L + + + E Q L+ Sbjct: 298 TDLRGNEEADRAVHVIREAISLPFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVAM 357 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 ++ ++ + ++ + +R AL+ + L+ QP + G Sbjct: 358 YRAKEQGRN-CFRYYTRELNERVASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGM 416 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVN 578 + ++ + G++ P F+PL + L + V+ + +VN Sbjct: 417 EGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVN 476 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P + + G I + + + P+ + LEI E + ES+ + +L G +++ Sbjct: 477 LSPRQFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLS 536 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LKR +KID FV+DI+T+ A I +SI +A +LSVVAE Sbjct: 537 MDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEG 596 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET+ Q L G +QGY + RP P A+ Sbjct: 597 VETEGQLEFLRAHGCNEIQGYYLSRPLPAAE 627 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 101/502 (20%), Positives = 185/502 (36%), Gaps = 23/502 (4%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 + ++ ++ + Y + + Sbjct: 898 PRLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSF 957 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + RR H A D LT LPN + L + Sbjct: 958 VCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDL 1017 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG----R 413 D + ++ G ++ + L + +++ + ++ G E L+L R Sbjct: 1018 DRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKR 1077 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + ++ +R + + L L+ + Sbjct: 1078 AIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGK 1137 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 + ++ + +++ L + +R AL+ G+ +L+ QP G + +L Sbjct: 1138 N-NFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQH 1196 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQ 586 G++ P +F+P++ + L A+ +L K L + K + P+ SVNL Sbjct: 1197 PRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFAD 1256 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + RI + I P + LE+TE S+ +M + L + G IA+DDFGTGY Sbjct: 1257 GQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGY 1316 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+ D++KID FV + DA I R+I +A + +L V+AE VE+Q Q Sbjct: 1317 SSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLD 1376 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L + G +QGYL GRP P Sbjct: 1377 FLREHGCDEVQGYLFGRPMPAE 1398 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 105/505 (20%), Positives = 194/505 (38%), Gaps = 24/505 (4%) Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVC 304 G G + + A+ + + + +A Sbjct: 476 MPGMLQGPGTRQDELARIFSALQQWKQARGELVIYRKDGGSFWVDLEIVSVAAQNGDLTH 535 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 + + R + + + + H A DPLT LPN + L EQ + Sbjct: 536 WVAVGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQALADCTITRQEGVLMFID 595 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE----- 411 +DN + ++ G ++ + L +++ + + +L G E +++L T+ Sbjct: 596 LDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGDEFVVMLQDLGTQPEAAT 655 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + Q + + + F+ Q ++ LL Q Q+ Sbjct: 656 RKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTM 715 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARL 526 + + + + L +R L + L++ QP ++ G + +L Sbjct: 716 GRN-TVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQVDREQRITGVEALLRWK 774 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTL 584 G+++P +F+P+ + L VLE LA + G +VN+ Sbjct: 775 HPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQF 834 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + ++ K I P + LE+TE E ++ + L G +A+DDFG Sbjct: 835 RHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGM 894 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL D +KID F+ D+ ++ DA I +I LA++ L V+AE VET+ Q Sbjct: 895 GYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQ 954 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 ++ L LG Y QG+L P P+A+ Sbjct: 955 RSFLAGLGCGYYQGFLFCPPLPIAE 979 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 98/470 (20%), Positives = 184/470 (39%), Gaps = 24/470 (5%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + +A + + L + + + A D LT LPN R Sbjct: 558 RKDGSLFWEQAAIAPIFDDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRL 617 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L +Q + + +DN + ++ G ++ + + L ++E + Sbjct: 618 LNDRLQQVLAVGTRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECD 677 Query: 392 KLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 + +L G + +++L E + + + + + + + Sbjct: 678 TVARLGGDDFVVMLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVAL 737 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F+ +Q+T++ LL + Q+ L + + + + + +R L + Sbjct: 738 FNASQDTVEELLKRADLALYQAKDAGRN-TLRFFDPDMQAVISARAEMEADMRLGLQENQ 796 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LLY QP N G + ++ G++ P F+PL L V+E+ + Sbjct: 797 FLLYYQPQVNHAGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACR 856 Query: 562 WLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 L +VN+ L ++ ++ R + LE+TE + Sbjct: 857 QLQLWRTQAHTAQLTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKD 916 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + + + L G ++DDFGTGY++ LKRL D IKID FV D ++N DA + Sbjct: 917 VDGVIAKMVALKAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAAL 976 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VR+ + + + V+AE VETQ Q+ L G QGY GRP P+A+ Sbjct: 977 VRATVAMGRGLGMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAE 1026 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 109/535 (20%), Positives = 203/535 (37%), Gaps = 39/535 (7%) Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + D ++ ++ G + P + N+ +G E + Sbjct: 278 YWARDLEGRCIMENALVVEHWGSLLGKRPEDSGVSPDELAVWQENNRRVYEGEVIEAEVE 337 Query: 293 F-----------ILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + ++A + ++ ++ + + H A D LT LPN R Sbjct: 338 YQVGGQTRIFNNVVAPIKVDGQTIGIVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRL 397 Query: 340 LEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + E + + + +DN +F++ +G + + + + L +++ + Sbjct: 398 MFDRLEHALIGSARRKSHGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGD 457 Query: 392 KLYQLPGSELLLVLSGPETEG----RLQHMVNILNSR---QIHW------NNTGLDMGYG 438 +L G E +++L + G + + + + ++ + Sbjct: 458 TAARLGGDEFVVILEDIDGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASS 517 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 FD T + LL + Q+ A L + + T + L +R A Sbjct: 518 IGIALFDDTMVTAKELLRRADTAMYQAKAAGRN-TLRFFDPEMQAAVTHRAALETELRKA 576 Query: 499 LDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +D+ L Q + G + +L G + P F+PL + L VL Sbjct: 577 IDEQQFHLCFQVQMDQSGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVL 636 Query: 557 ESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 + + LA G +VN+ Q ++ L + + LE+TE Sbjct: 637 ATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTES 696 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + E+ + + +L + G R ++DDFGTGY++ LKRL + +KID FV+D++T+ Sbjct: 697 MMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDP 756 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA I +I L L V+AE VET Q L +G + QGYL GRP PL + Sbjct: 757 NDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLE 811 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 106/578 (18%), Positives = 205/578 (35%), Gaps = 37/578 (6%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 L + +I RD E S +++ + +F Y+ P Sbjct: 319 LLVSLAQRVTVEIRAHRDRHGRQAAEAALRLRERAIECSANAVIISSAQVPEFAIEYVNP 378 Query: 246 VFFIIFTLGVGKL--------------RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 F I + + + A++ + + + Sbjct: 379 AFERITGYTAAEAIGRSSSFLLRNDHEQAGLYEIRAALAEKREGKAVLRNYRKNGSLFWN 438 Query: 292 AFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 +A + + + + + H A D LT LPN L+ Sbjct: 439 DLYIAPVKDDEGKTTHFVAAMSDITPMKQYETTLHRLASHDVLTGLPNRALLQDRLENAI 498 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + +D +F++ G ++ I L ++E++ + +L G E Sbjct: 499 AYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARLGGDE 558 Query: 401 LLLVLSGPET------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 +LVL +Q ++ + + + + + + + L Sbjct: 559 FVLVLPECGDGPSGYSSDVIQRIMEAVV-KPLTIQGSEFFLSCSMGIAVYPNDGADPTTL 617 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L +S ++ Q +++ + +R A++ +L+L+ QP + Sbjct: 618 LAHADVAMYRSKELGRN-NFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQPQVDL 676 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + ++ G++ P F+ L + L VL++ + Sbjct: 677 HTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGF 736 Query: 572 -GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R +VNL Q ++ I + + + + +E+TE ++ E ++ + L Sbjct: 737 TQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRDL 796 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G ++++DDFGTG+++ LKR D +KID FV+DI N DA IV SI LA Sbjct: 797 KSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNL 856 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+V+AE VET Q +L G +QGY +P P Sbjct: 857 KLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSD 894 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 102/490 (20%), Positives = 186/490 (37%), Gaps = 27/490 (5%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWL 318 FL T A + ++ +L + + + Sbjct: 997 FLRATRATQEQGEWAGEIVQFHRDGRRLDVEGRWTLIQGEQGQPDAILAIDTDIGQRKAT 1056 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLM 370 R A D LT LPN L G + + +DN + ++ G Sbjct: 1057 EREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDNFKTLNDTLGHD 1116 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE--------TEGRLQHMVNILN 422 ++ + L ++ + + +L G E ++++ G + + + + Sbjct: 1117 QGDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIEGLSTHPGELAMSARTVGEKILAVL 1176 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQET--LQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + F G+ T + LL Q Q+ L + Sbjct: 1177 ATPYVLQGYHYRSTPSIGVAPF-GDGRTSTVGELLKQADLAMYQAKTAGRN-TLRFFDPG 1234 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYDEILARLKYDGGIMTPDKF 538 + T + L N +RTAL + +L+ QP ++ G G + ++ G+++P +F Sbjct: 1235 MQAVVTARAELENDLRTALAREQFMLHYQPQIDRRGSVTGVEALVRWPHPQRGMVSPGEF 1294 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 +PL + L VL + LA + +VN+ + ++R Sbjct: 1295 IPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRA 1354 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + LE+TE + E+++ + L G ++DDFGTGY++ LKR+ Sbjct: 1355 ITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMP 1414 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV+D++ + DA IV +I L+++ L V+AE VET +Q+ L + G + Sbjct: 1415 LDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAY 1474 Query: 717 QGYLIGRPQP 726 QGY RP P Sbjct: 1475 QGYFFSRPLP 1484 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 108/525 (20%), Positives = 204/525 (38%), Gaps = 23/525 (4%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 T Y + + G P++ R + L + L + + Sbjct: 352 ILAVNAAFGEITRYPVEALLGRTPPLWRTAHQDAAF-YRRIWRQLLASGRWEGELWHRK- 409 Query: 281 FLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 T + L ++ + +++ + + + A DPLT LPN Sbjct: 410 ---RDGTPFPLWLSISCVRDEQGRPRQYVFVFNDISQLKDSQEQLERLAHYDPLTGLPNR 466 Query: 338 RA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 LE+A + + +D + ++ G + +I + L +++ Sbjct: 467 HLALARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQ 526 Query: 390 NEKLYQLPGSELLLVLSGPETEGRL--QHMVNILNSRQIHW-NNTGLDMGYGAAWGRFDG 446 + L +L G E L+V+ + H + + + + +G + G Sbjct: 527 EDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPG 586 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + L+ + A A E ++ +++ + ++R AL + +L Sbjct: 587 DGRSASELIRNADAAMYLAKAQGSN-AYRFYTESLTRAANERLSMETSLRRALRCEEFVL 645 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 + QP+ + G + ++ ++ P +F+PL + L VL + Sbjct: 646 HYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQG 705 Query: 564 ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VNL P L+ ++ G++ + + + P + LE+TE AE + Sbjct: 706 KAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQA 765 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L + G +AIDDFGTGY++ LKR D +KID FV+D+ ++ DA IV +I Sbjct: 766 VKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTI 825 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + L +AE VET QQ A L +LG QGYL P P Sbjct: 826 IAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAE 870 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 128/572 (22%), Positives = 210/572 (36%), Gaps = 26/572 (4%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 ++ S A+ L R+ + ++ + A + L + Sbjct: 466 TAFITSTLQIFASRVAAE-LERQSADAHIRRQASLLDKAQDAIMVRGLDDAIRYWNKGAE 524 Query: 240 AGYLVPVFFIIFTLGVGKL---RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 Y + L F T V N L+ T + Sbjct: 525 RLYGWKADEVTGRSTEMLLYGDPTAFRENTRKVIAHSEWNGEITQLRKDGTALVVEAHWT 584 Query: 297 VLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQE 347 +L + +L + + + H A DPLT LPN L Sbjct: 585 LLRDENDQPDAILAINTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQVRHG 644 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +DN + ++ G M ++ I + L +++ + L ++ G E ++VL G Sbjct: 645 QVGALLLIDLDNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIVLEG 704 Query: 408 P-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + + + + R + F+ TL L + Sbjct: 705 LSASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRAD 764 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE-- 517 Q+ AH AL + + + L +R AL G L+ Q + G Sbjct: 765 LAMYQAKAHGRN-ALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDARGCVS 823 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRF 575 G + +L G + P F+PL + L L VL+ L Sbjct: 824 GAEALLRWQHPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSL 883 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ Q + A +++ +R P+ + LE+TE N + ++ + L G Sbjct: 884 AVNVSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGI 943 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++DDFGTGY++ LKRL D IKID FV+D++ + DA I RSI L ++ +L VV Sbjct: 944 GFSLDDFGTGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVV 1003 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 AE VET Q A L + G Q QGYL RPQP Sbjct: 1004 AEGVETDAQHAFLAEHGCQAYQGYLFNRPQPA 1035 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 106/432 (24%), Positives = 184/432 (42%), Gaps = 16/432 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFM 363 + + R AL D LT LPN LE+ E + + + +D + + Sbjct: 490 INERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLV 549 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + L ++ N+ + +L G E ++VL+ + ++ + Sbjct: 550 NDTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQ 609 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + + ET L+ + A A Sbjct: 610 NFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCA-QYFNRS 668 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 + +++ L N + AL G LY QP + G + ++ + G+++PD Sbjct: 669 LDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDA 728 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L VL LA SVNL L + +++ A + + Sbjct: 729 FIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADV 788 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + Y + + LE+TE NAE ++ ++++H G +I++DDFGTGY++ LKR Sbjct: 789 IREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFP 848 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV+DI +T DAMI ++I +A +L V+AE VET Q LL G + Sbjct: 849 LDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQY 908 Query: 717 QGYLIGRPQPLA 728 QGYL +P P+ Sbjct: 909 QGYLFAKPLPVE 920 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 107/625 (17%), Positives = 222/625 (35%), Gaps = 38/625 (6%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR-----------MI 190 ++ I+ + + + LLSL T Y R + Sbjct: 157 IIACLSFLGFAIALWLANVSSNRLSQRLLSLETTAHNIISNGNYSLRAQKVENDTISNVT 216 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVPVF 247 + + +++ E++ ++ + + + + C + +PV Sbjct: 217 TNFNQMLDFFQQQDTQLRDSEEKFRLINETSKVGIFQLDINGTCVYANTELSLITGLPVN 276 Query: 248 FIIFTLGVGKLRYPFLNLT---WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SF 301 I+ + + + + W V + + N +A + +L Sbjct: 277 EILESNWLTAIHPEDRSTVEEQWQVMLDNNQSLDLNCRLKTPQTKFIAAYVRLLRRSDGR 336 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 + + + + ++ A D LT L N R E ++ Sbjct: 337 LIGYIGAINDVSEIKNAQTQFEEMAYYDMLTGLANRRLFRNRLEHVVSNLKKEQSSLGLI 396 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G ++ + L ++ ++ + +L E ++L G + Sbjct: 397 LVDLDRFKSVNDAMGHDAGDKLLKIVAGRLQQCVRASDTVARLSSDEFAIILPGIKNSRT 456 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 H+ + + + N T + N + ++ + + Sbjct: 457 TAHVAEKVLTAIQQPVLINETEQRLTASIGIAIAPQNGTDAKTIIKNADLALFHAKDNGR 516 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 ++ Q +V L + ++ A+ D L QP G++ ++ Sbjct: 517 N-NYQFFTVEMNIQLIDRVALTHDLKQAVKNSDFTLVYQPKICLKQGNLVGFEALIRWNH 575 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KKGPRFSVNLMPLTL 584 G + P +F+P+ Q L V+ + + L T + +VNL Sbjct: 576 KIRGAVGPTEFIPVAEQTGLIIPLGRWVITTACEQLRTMYDEEIVNDSVSMAVNLSAHQF 635 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 +++ I + I P +E+TE N ++++ +E L + G +I+IDDFGT Sbjct: 636 QDEHLVDFIRDRINTFDIKPGQFEIELTESVLMENFDNAIEKLEALRQLGIQISIDDFGT 695 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL + +K+D FV DI + D I ++ +A + +VVAE VET+QQ Sbjct: 696 GYSSLGYLKRLPVNTVKVDRSFVTDIPNDKSDMEITSAVIAMAHNLNYTVVAEGVETEQQ 755 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L G Y QGY +P P + Sbjct: 756 LQFLEHSGCDYGQGYFFSKPLPDHE 780 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 108/446 (24%), Positives = 197/446 (44%), Gaps = 23/446 (5%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK--------SFCCLR 356 ++ + A DPLT LPN R L+ +QE + + Sbjct: 365 MVGGFYEVTERKKAEEAIQNLAFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFID 424 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET------ 410 +D+ + ++ G +R + L ++E + + ++ G E +L+L + Sbjct: 425 LDDFKTLNDTLGHDTGDKLLRQVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAA 484 Query: 411 ---EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E Q ++ +LN + ++T F G+QETL+ LL Q+ A Sbjct: 485 THAELVAQKVLRVLN-KPYLLDSTPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKA 543 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILAR 525 + + + + ++ ++R A+ +L+ QP N + G + ++ Sbjct: 544 KGRN-TVRFYDTTMQEVVNAKSVMEASMRQAITGQQFVLFYQPQINSNGQIIGAEALVRW 602 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLT 583 G++ P+KF+PL + VL++ + L +VN+ Sbjct: 603 RHPQKGLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQPATAQITMAVNVSARQ 662 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q ++ + R+ + +PQ + LE+TE + E + ++ L K G ++DDFG Sbjct: 663 FHQIDLVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFG 722 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL D +KID FV+DI+ ++ DA I R++ LAK+ +V+AE VE + Sbjct: 723 TGYSSLAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIE 782 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q +L +G + QGYL GRP P+ + Sbjct: 783 QHQMLIDMGCRVFQGYLFGRPVPIEE 808 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 118/569 (20%), Positives = 223/569 (39%), Gaps = 30/569 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL-----LLCTPYENDFI 239 R++ +L R+I +E + + + ++L+ ++ + I Sbjct: 207 RIVPRDRQEVLLVVREITQRRQQENQLRLWAKVFEASNEAILITDANFRIISVNRAYETI 266 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL---QGVETEYSLAFILA 296 GY + TL VG + VS L + Q L + E+ F + Sbjct: 267 MGYREQDVLGVDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVT 326 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + + + A D LT LPN L Sbjct: 327 QVTNSRGEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRR 386 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 Q + +D + ++ G + ++ + L ++ + + +L G E +++ Sbjct: 387 QGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLF 446 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 TEG L + L + L + + + E L+ Sbjct: 447 PRVRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAM 506 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 + ++ +T ++ L + +R+A+D GD L+ QP + + G Sbjct: 507 YLAKEKGRN-NYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGL 565 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVN 578 + ++ + G+++P +F+PL + L VL +K LA SVN Sbjct: 566 EALIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVN 625 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L Q + R+ + + + P A+ LE+TE + +S++ ++ L + GFRIA Sbjct: 626 ISALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIA 685 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTG+++ L+ L +++KID FV++++ IV SI LA+A +AE Sbjct: 686 IDDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEG 745 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VET+ + +L G + +QGY RP P Sbjct: 746 VETRAEFDVLQARGCRLMQGYFFARPMPP 774 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 665 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 86/441 (19%), Positives = 174/441 (39%), Gaps = 16/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCL 355 + ++ + + R A D LT LPN L++ + + Sbjct: 598 NYVVVLTDISQRKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFI 657 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G ++ + L +++ + + + G E ++++ + L Sbjct: 658 DLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLV 717 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ + ++ L + + + + LL ++ Sbjct: 718 NVARKIMHALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKN- 776 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 + + ++ L N++R AL++ + L Q + G + ++ + Sbjct: 777 TFHFYSADGNANSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAE 836 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKN 588 G+++P F+P+ + + VL+ + + R VN+ + + Sbjct: 837 LGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDS 896 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + ++P + LEITE NAE + ++ G + IDDFGTGY++ Sbjct: 897 LYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSS 956 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK D +KID FV+DI ++ D I ++I +A + ++VVAE VETQ Q L Sbjct: 957 LGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFL 1016 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 G LQGY+ RP + D Sbjct: 1017 RGQGCDQLQGYIFSRPLVVED 1037 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 105/613 (17%), Positives = 215/613 (35%), Gaps = 34/613 (5%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 V FD ++ ++ ++ I + +Y+ R + ++ Sbjct: 113 VHDIFDAGTAVARIEASRSLTPLLLRTFAVALCSAIIAAVVFYMLRTLPLRATSRAY--- 169 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF------------II 250 E + L + L + DF A ++ +I Sbjct: 170 --QALDESESKYRLLYESMREGMALHHMDFDENGDFAAISVIDANPSCAAMFGCDPQTLI 227 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 + + F + L + F + +L + A + + + Sbjct: 228 GSDSIALFGETFREYLSELLRLLEQGTSIQFELTLPRTDNLYSVHAFSPDHGL-VATLFE 286 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 ++ A D LT LPN Q E + L +D + Sbjct: 287 DITERRKSEQQIQHMAYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFLDLDRFKD 346 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + R L ++ + L +L G E +++++ + + L Sbjct: 347 INDTLGHSAGDQLLIQVTRRLGRQIRSCDTLARLGGDEFVVIVTDLGKKMNATRVAQDLI 406 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 L + F + + L+ S + Sbjct: 407 NAIQPPFLIAGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNR-YNFYSA 465 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 ++ + ++ +R AL++ + + QPI + + ++ G + PD Sbjct: 466 SMNQKALMRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRWNHPTRGRIPPD 525 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIR 595 +F+ L + L VL ++ + T RFSVN+ + +++ A + Sbjct: 526 QFIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQIERQDFAEIVRN 585 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + +E+TE ++++++ ++ L ++G AIDDFGTGY++ +K L Sbjct: 586 ALRESGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFGTGYSSLGYIKTL 645 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IKID FV+DI T+ D IV +I +++ + +AE VET +Q L + G + Sbjct: 646 PIDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRFLQERGCEE 705 Query: 716 LQGYLIGRPQPLA 728 +QGY RP Sbjct: 706 IQGYYFHRPLSAE 718 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 108/568 (19%), Positives = 207/568 (36%), Gaps = 28/568 (4%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 L Y + R + + R+ + + T ++ + CT I G Sbjct: 457 LLYSIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCT------ITG 510 Query: 242 YLVPVFFIIFTLGVGKLRYP--FLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 YL + R+ F + W ++ + Y + + Sbjct: 511 YLAAEVIGRKSSMFKPERHEATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAV 570 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + QA DPLT L N L+ Sbjct: 571 RDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHG 630 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 L +D ++++ G + + + R L +++ + + +L G E +V+ Sbjct: 631 CKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHD 690 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 L + + L + F + + +Q LL + Sbjct: 691 LADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYK 750 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A + +V L +R A++Q L+ QPI + G + Sbjct: 751 AKQAGKNRA-QPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEA 809 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ + G+++P +F+P+ + L VL +++ R ++N+ Sbjct: 810 LIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVS 869 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + + + + L + + +++ EITE +E+ + + + G A+D Sbjct: 870 GVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALD 929 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ LKR DI+KID FV+D + DA +V +I ++A + L V AE VE Sbjct: 930 DFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVE 989 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +Q+ L LG YLQGYLIG+P Sbjct: 990 SAEQREFLRALGCDYLQGYLIGKPLAAD 1017 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 110/471 (23%), Positives = 201/471 (42%), Gaps = 24/471 (5%) Query: 282 LQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 L+ ++ ++V+ + + + + QA D LT LPN R Sbjct: 565 LKKNGELHAKWLSISVIRRADGSIYRHVGQFSDITEKKRKDELIWEQANFDTLTNLPNRR 624 Query: 339 ALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 Q + L +D + ++ +G M + + R L ++E Sbjct: 625 LFADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREE 684 Query: 391 EKLYQLPGSELLLVLSGPETEG-----RLQHMVNILNS---RQIHWNNTGLDMGYGAAWG 442 + + ++ G E L++L+G +E R + + + + R + T Sbjct: 685 DTVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIV 744 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F G+ + + LL + QS A A+ + + K+ L +R AL++ Sbjct: 745 LFRGHSDDPERLLAHVDTAMYQSKAKGRN-AICFFDSSMQEILEKRGQLETALRGALERK 803 Query: 503 DLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 + LL+ Q + G + +L G ++P +F+P+ + L VLE+ Sbjct: 804 EFLLHYQLQMDSSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETAC 863 Query: 561 KWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 LA D + +VN+ + + ++ + ++ I P + LE+TE Sbjct: 864 AQLARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLD 923 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + S+ +E L G + ++DDFGTGY++ L RL D +KID FV+DI T+ DA Sbjct: 924 DINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAA 983 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV++I +A + + V+AE VET++Q+ L G Q QGYL +P P+ + Sbjct: 984 IVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEE 1034 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 98/497 (19%), Positives = 180/497 (36%), Gaps = 16/497 (3%) Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTL-CLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + + R L V+ + Sbjct: 580 LGTMEELMDAVIPLDRPALLGALEQVARAPDHATLDCRVQARPTRIVQFQIESEWQDGVL 639 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCC 354 + V+ + A D LT LPN A L A + + Sbjct: 640 ERIRGTVQDVTSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHILAVLF 699 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +DN + ++ G + + ++ + L ++E + +L G E + +L Sbjct: 700 LDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLPRVTRAEDA 759 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + ++ L F + + LL + Sbjct: 760 AAVARKMLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGRN 819 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 ++ + +++LL N +R A+++ +L L+ QP + G + ++ Sbjct: 820 -NFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHP 878 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 D G++ P +F+P+ L VL + VN+ L + + Sbjct: 879 DFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRRAD 938 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++++ +P+ + LEITE +++ + +L G +A+DDFGTGY++ Sbjct: 939 FVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYSS 998 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL +KID FVKD+ + DA + + LA+ L VVAE VET Q+ L Sbjct: 999 LAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFL 1058 Query: 709 HKLGVQYLQGYLIGRPQ 725 G LQGYL RP Sbjct: 1059 VARGCHTLQGYLYSRPL 1075 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 20/268 (7%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L F+L + + ++S + Y + + LS I+G R + V G Sbjct: 6 LRFSLVALGYAVVGWLSLQLAVPPGYAVPFFPAAGIALSARIIYGPRILPAVFLGSLAVQ 65 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + S + V G + G + R L+ Sbjct: 66 IPALLQSSVAVPVWWGPALVPLGAVLQAGAGAWLAERLIGFPNPLDAPRPIIRFLLGVAP 125 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + C + + FGDA + V++ L + Sbjct: 126 LSCLVSPTFAIPVLMGAGVISFGDATFN-WWNWWVGDTLGVVVATPLMFAFL-------- 176 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 P+ R F ++ ++++LL ++ A + F Sbjct: 177 --------GHPAADWRARRFGIAIPLGIAIVLLGFAFHQVRNWEALRVETQFSRDADHIT 228 Query: 256 GKLRYPF---LNLTWAVSTLCLLNYNQN 280 ++R L++ ++ L ++ N N Sbjct: 229 SQVRKRLDMQLDMLQSIERLITVSENVN 256 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 110/532 (20%), Positives = 197/532 (37%), Gaps = 20/532 (3%) Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 + RA + W + + ++ + + L Sbjct: 164 EWDVRAGEIYW-SDELYRIFGFTPGEPKRISKEWIYSLIHPADLPA---FKQQLLTSVKT 219 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + ++ + + G + + + V H Sbjct: 220 LQSFNMIYHTTSRSGGELVVNIQGEVERGEDGRAWLISGTVLDITARIKAESEIHHLINY 279 Query: 329 DPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN L Q ++ CL +D + ++ G ++ + Sbjct: 280 DTLTGLPNRSLLHDRLRQAIAQAAQDRHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVA 339 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGY 437 R L ++E++ L +L G E ++VL G +E + + + I ++ L Sbjct: 340 RRLAACVRESDTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTA 399 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + E LL ++ ++ + ++++L N++R Sbjct: 400 SIGIAAYPMDGEDGHTLLKHADLAMYKAKELDRN-NFHFFSHDMNIKVMERMMLENSMRK 458 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ + L QP + G + +L D G++TPD+F+ L + Sbjct: 459 ALERDEFFLVYQPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEW 518 Query: 555 VLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + + R +VNL Q + I + + P+ + LEITE Sbjct: 519 VLMTACRQNRAWQKLGFPPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITE 578 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 NA+ ++ + L + G +AIDDFGTGY++ LK +KID FV+DI TN Sbjct: 579 SAIMRNADQNIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTN 638 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 DA I I +A+ L+V+AE VET+ Q L +QGYL RP Sbjct: 639 PDDAAIAEIIIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPL 690 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 98/487 (20%), Positives = 185/487 (37%), Gaps = 22/487 (4%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 + W + ++ E + + + + + Sbjct: 458 WAHLTRGDIWHGEIINRRKDKSIYI-----ESATITPVKQADGKITNYVAIKEDITEKKK 512 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGL 369 A D LT LPN R L+ A + L +DN + ++ G Sbjct: 513 AEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGH 572 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR---LQHMVNILNSRQI 426 + + I + + ++E + + +L G E +++ + ++ + S+ Sbjct: 573 TVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAMHIATTLIQEI-SKAS 631 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + L + + + + LL + + + Sbjct: 632 VVEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSRN-GFHFVTPEMQLSAS 690 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 + + L N +R AL + +L LY QP N + G + +L + G+++P +F+P+ Sbjct: 691 RNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAE 750 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 VL + ++ D +VNL + QKN+ I + + Sbjct: 751 SSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQL 810 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + + LE+TE + ES + + H+ G R++IDDFGTGY++ LK+ + +KI Sbjct: 811 PNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKI 870 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F++DI + D IV +I D+A L +AE VET +Q A L G +QGY Sbjct: 871 DQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFS 930 Query: 723 RPQPLAD 729 +P P + Sbjct: 931 KPLPSVE 937 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 99/587 (16%), Positives = 218/587 (37%), Gaps = 24/587 (4%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 +F + + ++ + + + Q + + +R L+ Sbjct: 319 MAPLFRIATIEAVTAIMFLAAASIMMMLWWRRQQALYQASYYQQQLQHQMLSQRFDNLTR 378 Query: 220 LAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 A VLL+ ++ GY + L +L W + Sbjct: 379 FANDLVLLVDAQGQIIDANERALDTYGYPEDELKTFKLKDLCDLSQQECDLFWEQLKVEQ 438 Query: 275 L-NYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLT 332 + + + + + + L+ ++R + + QA DPLT Sbjct: 439 GVRFETMQFRQDGSTFPVEINARWIDLDRGHLVQAIIRDISERKAAEDQLVHQAYHDPLT 498 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN + + L +D + ++ G + + ++ + + Sbjct: 499 GLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLGHAVGDRILTTLAQRMQ 558 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAW 441 +++ + + + G E L++L + + L+ S+ + + + + Sbjct: 559 ETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQPVLIDGEEMCLTTSVGI 618 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + L+ ++ ++ +++ L N +R AL + Sbjct: 619 SVAPEDSIEVDQLIRFADTAMYRAKEKGRN-NFQFYTPDMNAHAGRRLQLENNLRKALQR 677 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 ++++Y QP + G + +L + + G+++P+ F+PL + + LE Sbjct: 678 QEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIGAWALEQ 737 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + + +VNL +N+ I ++ + ++ + + +E+TE Sbjct: 738 ACQQTVAWQKNHPELKIAVNLSARQFRNENLVDDIEQILNKTGLAARHLEMELTESLLME 797 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + ++ + +L K G +AIDDFGTGY++ L R D +KID FV + + Sbjct: 798 DVDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMSLDNNG-- 855 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I R+I L + LS++AE VE +Q+ LL +LG QGY RP Sbjct: 856 IARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFSRPV 902 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 101/501 (20%), Positives = 198/501 (39%), Gaps = 25/501 (4%) Query: 252 TLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLY 307 L G+ F W V+T + Y ++ + + Sbjct: 330 ILSSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYVS 389 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDN 359 + S+ + + A DPLT LPN L Q + + +D+ Sbjct: 390 VFTDISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSSRTGKKGALLFVDLDH 449 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRL 414 + ++ G ++ L ++ + + + G E ++VL + Sbjct: 450 FKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVVLEDLDRNATEAAAIA 509 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + N + S + F G++ ++ LL Q Q+ Sbjct: 510 EQIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLLKQADISMYQAKKAGRN 569 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYD 529 L + + + + + L + +R A+++ L LY Q + + G + ++ + + Sbjct: 570 -TLRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQRMVGAEALIRWIHPE 628 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQK 587 G ++P +F+P+ + L V+ + LA +KK +VN+ Sbjct: 629 RGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSAHQFRAL 688 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + I + LE+TE + + + + L G ++++DDFGTGY+ Sbjct: 689 DFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLDDFGTGYS 748 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+L D +KID FV+D+ + DA++V++I DLA ++V+AE VET+ + + Sbjct: 749 SLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVETELELDI 808 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G + QGYL GRP P+ Sbjct: 809 LKGYGCRLYQGYLFGRPVPIE 829 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 98/463 (21%), Positives = 188/463 (40%), Gaps = 18/463 (3%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ L + V + + A DPLT LPN R Sbjct: 553 RKNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYFDPLTDLPNRRM 612 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + + L +D+ + ++ G ++ + ++++++ Sbjct: 613 LQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDD 672 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E L+L + + + L ++ + + + + F + Sbjct: 673 VVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDG 732 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++ L + E ++ + ++ L +R A ++ +L L+ Sbjct: 733 GDVKNLEKHADIALYHAKEEGKN-TFRFYLEELNSTISTRIALEQGLRYAKERQELELHY 791 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + +L D G+++P +F+PL Q L VL + Sbjct: 792 QPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQ 851 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +VNL + L + R+ + I P+ + LE+TE +N + + Sbjct: 852 WREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQ 911 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +E+L G I+IDDFGTGY++ LK I+KID FV+D+ N+ D I RS+ D Sbjct: 912 LLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVD 971 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + VAE VE+++Q +L ++G Y+QG++ RP Sbjct: 972 LANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQAD 1014 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 662 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 115/610 (18%), Positives = 217/610 (35%), Gaps = 34/610 (5%) Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 +D + + S+ A L +LFY + R++ RR + Sbjct: 115 IYDAGTSVGKILVSRSLAPLLWKTSSVAVAALAAGLLFYTVLRILPLRAV-----RRAYS 169 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 EK+ +L V L + ++ +V V L Sbjct: 170 SLEESEKKYRSLYESMKEGVALHRINYDEYGVPVSFTIVDVNPSCQLLLGLSSEELIGKD 229 Query: 266 TWAVSTLCLLNYNQNFLQG--VETEYSLAFI---------LAVLISFSVCLLYMVRIYHR 314 + + Y L+ +S F+ +AV + +++ + Sbjct: 230 GSELFGGAVAGYFPEILRAASTGEAFSFDFVQQADKQRIHVAVFFPETGYFAFLMEDVTQ 289 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRH 366 + + A D LT LPN L EQ + L +D + ++ Sbjct: 290 RKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDRFKVINDT 349 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV--LSGPET--EGRLQHMVNILN 422 G + + L ++ ++ L ++ G E +++ L GP+ QH+++ + Sbjct: 350 MGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQHLIDSIT 409 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S + + F + LL + ++ Sbjct: 410 SV-YPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMY-AAKEGGGKGYHFYSPEMN 467 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 + ++ + +R AL++ + L QPI + G + +L + G++ PD F+ Sbjct: 468 LKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDMFI 527 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + VL + + + R SVN+ Q N + + + Sbjct: 528 QVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCSIIR 587 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + P + LE+TE + E++ + QL + I IDDFG GY++ L++ D Sbjct: 588 ETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPID 647 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 IKID F++D+ ++ D IV +I +A L VVAE VET +Q L + G +QG Sbjct: 648 RIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQG 707 Query: 719 YLIGRPQPLA 728 + RP Sbjct: 708 FYFHRPLSEE 717 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 105/568 (18%), Positives = 211/568 (37%), Gaps = 27/568 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--LLLCTPYENDFIAGYLVP 245 R + ++ + I E R L + + + + T F + Sbjct: 543 RQLAKEKHQRLRVQELIDNIDAAESRYQLLIENSLVGIFVYQHHRYTYVNPRFAEIFGYT 602 Query: 246 VFFIIFTLGVGKLRYPFLNL--------TWAVSTLCLLNYNQNFLQGVETEYSLAFIL-A 296 I+ + +L +P L L Y L+ + ++ Sbjct: 603 PEEIVDSAPQPQLVHPDDQLFVDANNLKILGGVNANHLRYEFVGLRKTGQPIDVEILIGR 662 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + L+ + + + A DPLT L N Sbjct: 663 GISEGQPALIGSLLDITERKEAEKTIEHLAFHDPLTGLANRLLFMDRIEQAIAHAHRHHE 722 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G ++ + + L ++E + + + G E ++LSGP Sbjct: 723 SFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTVSRFGGDEFNVLLSGP 782 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E ++ + + + + N+ + M + + L+ ++ Sbjct: 783 SHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGREAITLVKNADTALYRA 842 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 ++ + +++ + +++R ++ +L ++ QP + G + + Sbjct: 843 KDLGRN-NFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQVGLQSGRITGLEGL 901 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 + G ++ P F+PL + L VL++ L T R +N+ Sbjct: 902 VRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAGFAPMRLGINVSA 961 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + + A ++++ K + P + LEITE N + + +L G I+IDD Sbjct: 962 HQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETLRRLRAVGITISIDD 1021 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG+++ LK L AD +KID FV+++ +A I R I ++A +L V+AE VE Sbjct: 1022 FGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHGLNLKVIAEGVEN 1081 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q Q L + G +QG+L+ RP D Sbjct: 1082 QAQLDFLREAGCDEIQGFLVSRPLAAED 1109 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 106/466 (22%), Positives = 174/466 (37%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + Y ++ + + + + + A DPLT LPN Sbjct: 870 RKNGEIYPTWLAVSAVRNDQGKATHYVGISSDLSQLRQTEAEREHLAHYDPLTDLPNRLL 929 Query: 338 ------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 AL QA L +D + ++ G + + ++ L M+ + Sbjct: 930 LRSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSED 989 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNN-TGLDMGYGAAWGRFDGN 447 L +L G E LLVL + L ++ + + +G F + Sbjct: 990 LLARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPND 1049 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 ++ + L+ Q+ E +S + + + L N +R A+ L +Y Sbjct: 1050 GDSAEQLIQHADAAMHQAKTLGRN-TYHFYTEDLSRASNEHLELENRLRHAITANQLRVY 1108 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ + G++ P +F+PL + L VL+ Sbjct: 1109 YQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGM 1168 Query: 565 THPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VNL P L+ NIAG I ++ + LE+TE E Sbjct: 1169 RWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDV 1228 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L R+AIDDFGTGY++ LKR DI+KID FV DI + D I +I Sbjct: 1229 IKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATI 1288 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET++Q L G QGYL P P + Sbjct: 1289 IAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEE 1334 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 107/461 (23%), Positives = 200/461 (43%), Gaps = 21/461 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 EY L + + + + R ++ A DPLTLLPN R L Sbjct: 546 EYLLISAVKDIKNEVANYVATFRDITANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHA 605 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +DN + ++ G M ++ + L ++E++ L +L G Sbjct: 606 LASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGD 665 Query: 400 ELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L + + + + + + + + F G+ ++ Sbjct: 666 EFVVILENLSELAMDAATKAELIGEKILAALNQVYPLASQEYHGAASIGVTLFAGHALSI 725 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ Q QS L + ++ L +R A+D+ L L+ Q Sbjct: 726 DELMKQADIAMYQSKKSGRN-TLRFFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQ 784 Query: 512 RN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N + ++ + G+++P F+PL L VL++ L + + Sbjct: 785 LNSVGTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDE 844 Query: 570 --KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + +VN+ QKN + +R+ I+P+ + LE+TE N E + + Sbjct: 845 RFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDIIVTM 904 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L + G + ++DDFGTGY++ + LKRL + +KID FV+++ +++ D IVR+I +A Sbjct: 905 NALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMA 964 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +L+V+AE VET++Q LL +G Y QGYL G+P P+ Sbjct: 965 ESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIE 1005 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 111/458 (24%), Positives = 194/458 (42%), Gaps = 21/458 (4%) Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA------- 343 + + + LL + R + ++ L A D LT LPN R L Sbjct: 639 IKTPIRDMHGHVTGLLSVSRDITDRKKAEQQIELLAFFDALTGLPNRRLLLDRLQRAGAA 698 Query: 344 -PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 E + + +DN + ++ G M + + + L ++ ++ + + G E + Sbjct: 699 CQRNEKLGALLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFV 758 Query: 403 LVLSGPETEGR-----LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 ++L G + + + + L ++ F + T+ L Sbjct: 759 VMLEGLDADTALAALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTVDEL 818 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L + Q+ A + + Q T + L + +R + + +L ++ QPI + Sbjct: 819 LKRADLAMYQAKAAGRNTQ-RFFDPDMQAQVTARSQLESDLRQGIARHELTVHLQPIVDG 877 Query: 515 --EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--K 570 G + ++ G+++P F+PL + L QVL++ + L Sbjct: 878 STRLCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPAT 937 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 +VN+ Q + ++ +PQ + LE+TE + E ++ + QL Sbjct: 938 ASFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQL 997 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G A+DDFGTGY++ LKRL D++KID FV+D++T+ DA IVR+I LAK+ Sbjct: 998 KRVGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSL 1057 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE VET Q + L G + QGYL GRP PL Sbjct: 1058 DLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLE 1095 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 97/445 (21%), Positives = 178/445 (40%), Gaps = 16/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 F L ++ + R H A D LT LPN ++ + Sbjct: 401 GFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLA 460 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + ID + ++ G ++ I L ++E + + + G E +L+L+ Sbjct: 461 VAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRM 520 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + ++ L + + G+ T + LL S Sbjct: 521 EDANDVTQRILKKLKEPVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKES 580 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 V + +Q+L +R AL+ +L+LY QP N G + +L Sbjct: 581 GRD-NYHFYSSTVQEKAYEQLLEEMYLRRALENRELVLYYQPQVNIATGRLVGMEALLRW 639 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTL 584 G+++P +F+PL D VL + K +VN+ T Sbjct: 640 KHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTF 699 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++N+ + + +SP A+ LEITE A N ++++Y + +L G +I IDDFGT Sbjct: 700 GRENLIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGT 759 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 G+++ L + +KI F+ ++ + ++ IV+++ +AK+ L+V+AE VET +Q Sbjct: 760 GFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQ 819 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L L QGYL + + Sbjct: 820 FEFLQGLQCDEFQGYLCSKAVTSEE 844 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 99/430 (23%), Positives = 177/430 (41%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + + QA D LT LPN S L +D + ++ Sbjct: 436 QRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTIND 495 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + ++++ L ++E + + + G E ++L + + S Sbjct: 496 TLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSAL 555 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + H N L + +D + + L+ Q+ +S Sbjct: 556 EQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRN-TYQFFCSGLS 614 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 +++ L ++R AL++ + LLY QP N + G + +L + G++ P F+ Sbjct: 615 NGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFM 674 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + L VL + T +VNL Q ++ G I R+ Sbjct: 675 SVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPDLTGMIARILD 734 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + PQ + LEITE A + E + +++L G +I++DDFGTGY++ L++ + Sbjct: 735 ETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLN 794 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+ N+ DA IV ++ LA+ +L+VVAE VE +Q L L + QG Sbjct: 795 TLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQG 854 Query: 719 YLIGRPQPLA 728 Y+ RP Sbjct: 855 YIFNRPLEAD 864 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 124/756 (16%), Positives = 266/756 (35%), Gaps = 54/756 (7%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVP---- 66 + I+ + F + ++ H + L+ +P V + F W P Sbjct: 67 LGIWAMHFIGMLAF-----HLNDDVTYHLGIVLLSIVPAVVASGLAF---WIISHPETRP 118 Query: 67 --VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ- 123 ++ G F ++ + ++ M + + + + Sbjct: 119 IQLVFGAFLISVGVVSMHYIGMEAMQMNAILTYDPVMWVASAIVAFVASLVGLYILFYIP 178 Query: 124 ---RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 R W L + + I ++ + T A + + S A +I Sbjct: 179 NVSRFHWRRLASSVLIGVAVS-GMHYVGMGAARFTPMEGAAKPVSDYAVDSTLLAYVIAA 237 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL----------- 229 + M +S A + A S E + ++ A+ ++++ Sbjct: 238 SVMTLFILMYISLRTA----SQLEAQSEELELKFESIIESASDAIIVADHNRTILQWNQG 293 Query: 230 ---LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L ++ + +V + F + + + L+ Sbjct: 294 ATDLFGYTTDEMVGQSIVAIIPERFREAHERGMRRYEAT--GEKRVIGQTVELIGLRKDG 351 Query: 287 TEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 E + L + ++R + + + + DPLT LPN R + Sbjct: 352 VEVPIEMSLGTWKTDKGIFFSSIIRDISERKRIEAQINDLVYLDPLTGLPNRRLFSDRLD 411 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 Q + + +DN + ++ +G + ++ + + +Q+ + L +L G Sbjct: 412 ALLGQSQSEQFALYYIDLDNFKVINDRFGHSIGDQFLKQVTTRIQSTIQKTDTLARLGGD 471 Query: 400 ELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 E +++ ++ ++N N + G + +T + L+ Sbjct: 472 EFIILSPDTKSNLAAHRAQELINVLHPPFELENEEVFTGASIGISLHPSDGDTAEELIKN 531 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-- 515 ++ A ++ +++ L +R + +G+ ++ QP E Sbjct: 532 ADIAMYRAKADGKN-GYQFFTNELNESVSRRSNLSMALRKGIGRGEFTVHYQPQIQLETE 590 Query: 516 -GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGP 573 G + ++ + G+++P +F+P+ + R VL + Sbjct: 591 MVIGMEALVRWNHPELGMISPGEFIPIAEETGSIHRLGEFVLNEACRQNKAWQDASIPPF 650 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R +VN+ + QK++ + R + Q + LE+TE +A+ ++ + +L Sbjct: 651 RVAVNISAVQFAQKDLPEVVSRALAASGLEAQYLELELTESV-IQSADRAIETMHELVAL 709 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++IDDFGTGY++ LK D +KID F K+I ++ DA +V++I +A L+ Sbjct: 710 GVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTKNIESDEKDAALVKTIIRMAHELDLN 769 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET+ Q A L QGY RP P + Sbjct: 770 VIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAEE 805 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 105/439 (23%), Positives = 179/439 (40%), Gaps = 15/439 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 L+ V + + A D LT L N AL + + + + + Sbjct: 572 LVGTVNDVTDQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVD 631 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + +R + L ++ L +L G E LLVL G + + Sbjct: 632 LDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVLPGADERAASEV 691 Query: 417 MVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 IL S + + L + + E L+ Q+ A Sbjct: 692 AACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRN-TF 750 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 ++ +++ L +R A +G+++L+ QP + G + ++ G Sbjct: 751 QLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLG 810 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 +++P +F+PL + L + + +VNL Q N Sbjct: 811 MVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFT 870 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + PQ + LE+TE + E + + +L G +++IDDFGTGY++ Sbjct: 871 AVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLN 930 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D++KID FV+D+ T+ DA IVR+I L K +L ++AE VETQ Q LH Sbjct: 931 YLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHA 990 Query: 711 LGVQYLQGYLIGRPQPLAD 729 GV ++QGY RP P D Sbjct: 991 AGVDFIQGYYFSRPLPAED 1009 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 102/470 (21%), Positives = 184/470 (39%), Gaps = 25/470 (5%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + AL DPLT LPN R Sbjct: 557 RKNGEIYPEWLTISAVRGQHGEITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRL 616 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + Q + + +DN + ++ G + +R + L ++ N+ Sbjct: 617 LNERLSKALTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSND 676 Query: 392 KLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 + +L G E +++L + +++H+ + + + Sbjct: 677 TVSRLGGDEFVILLEELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIP 736 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F ET++ LL ++ A + + + + L +R A + Sbjct: 737 FMDATETIESLLKSADMAMYKAKAAGKNRLF-FFDPAMQTEVEARAALERDLRQAQREKQ 795 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +LY QP + G + ++ G++ P +F + + L VLE K Sbjct: 796 FVLYLQPQVDQSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACK 855 Query: 562 WLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 L D ++N+ L + + R + LEITE + Sbjct: 856 QLVIWQKNPDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLED 915 Query: 620 AESSMYNIEQLH-KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + ++ ++ L + G +++DDFGTGY++ LK+L D IKID FVKDI N DA Sbjct: 916 IDGTIERMQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAA 975 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I ++ L ++ SL+V+AE VET +Q+ L G QGYL GRP P+ Sbjct: 976 IAEAVIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPID 1025 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 110/570 (19%), Positives = 207/570 (36%), Gaps = 31/570 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFI 239 + R+ + A++ + + L + + C FI Sbjct: 91 MLRIFAARASAELERTKAEQARREQLHFLQVLIDSIPHPIFYKDADRRYIGCNAALESFI 150 Query: 240 AGYLVPVF----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + F I G ++ A + +Y+ + + + F Sbjct: 151 GRTREEIIGKTVFDIGAEGRARICDAVDRKLLANG--GVESYDSTMIHTDGSIRDIIFSK 208 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------P 344 V ++ + + A D LT LPN L Sbjct: 209 TVFGNTDGSIGGIVGTILDITERKRAEEAIQQLAYFDALTGLPNRTLLRDRVSQLLSQAR 268 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + G L +D + ++ G + ++ + ++E++ + +L E +++ Sbjct: 269 REGGGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRESDTVARLGSDEFVVI 328 Query: 405 LSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L G E + +V + R I + + + + LL Sbjct: 329 LPGVGHEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTDGSSADILLKNADMA 388 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEG 518 ++ ++ + +++ L ++R AL++ + LL+ QP I + G Sbjct: 389 MHKAKEFGGD-GYQFYSSELNHRAMERLTLETSLRRALERREFLLHYQPLLGIGSGRIVG 447 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + +L + G+++P +F+PL + L VL S + L SV Sbjct: 448 VEALLRWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSV 507 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ + + + P+ + LE+TE +E++ + +L + G + Sbjct: 508 NVSARQFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSL 567 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTGY++ LK D +KID FVK++ + +A I +I LA +L VVAE Sbjct: 568 AIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAE 627 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VET +Q A L L +QGY I RP P Sbjct: 628 GVETAEQLAFLAALRCDVVQGYHIARPLPP 657 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 92/439 (20%), Positives = 181/439 (41%), Gaps = 18/439 (4%) Query: 308 MVRIYHRSEW--LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRI 357 + R D LT LPN + + + + + Sbjct: 440 IEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLFIDL 499 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + + R L + + + +L G E ++L + + Sbjct: 500 DHFKKINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIILDQLNNIENVILI 559 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 +N + + L + + G+ + + LL ++ Sbjct: 560 AQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRD-NY 618 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 ++ + ++ + L +R A+D+ L++Y QP ++ G + ++ + G Sbjct: 619 RFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENG 678 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 +++P F+P+ + L VL R SVN+ QK++ Sbjct: 679 MISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLV 738 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + R+ + +SP+ + LEITE ++ + ++ + +LH G +++IDDFGTGY++ Sbjct: 739 PMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLA 798 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ +KID FV+D++ + DA I ++ DLA+ +L+V+AE +E Q Q L Sbjct: 799 YLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLD 858 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G Y QGYL RP P + Sbjct: 859 RGCGYGQGYLFSRPIPAHE 877 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 104/430 (24%), Positives = 177/430 (41%), Gaps = 16/430 (3%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + + QA D LT LPN ++ +Q L +D + ++ Sbjct: 424 QKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVNDT 483 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---S 423 G + ++ + L ++ + + + G E L+ + + + + + S Sbjct: 484 LGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKLS 543 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 +N L + + E Q LL ++ E + Sbjct: 544 IPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRN-NFQVFAEEMHR 602 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 + Q+ L +R AL + + LLY QP + G + ++ G + PD+F+P Sbjct: 603 EALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIP 662 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L A VL++ + + R +VNL Q + I++ + Sbjct: 663 LAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLET 722 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 I PQ + LEITE A + E ++ +++L + G I IDDFGTGY++ LK + Sbjct: 723 TEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNT 782 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DIV N+ DA I ++I L++ L VVAE VET QQ + L + QGY Sbjct: 783 LKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGY 842 Query: 720 LIGRPQPLAD 729 P P + Sbjct: 843 YFCPPVPAIE 852 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 101/453 (22%), Positives = 180/453 (39%), Gaps = 21/453 (4%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------E 347 + + +V + + H A DPLT LPN R EQ Sbjct: 471 RDDLGTVRRAIEVVTDITDKKNREQEIHRLAFYDPLTRLPNRRLFFDRLEQAFSASARSG 530 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +DN + ++ G + + L ++ N+ + + G E +++L+ Sbjct: 531 QHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERLQEAVRANDTISRQGGDEFMVLLNN 590 Query: 408 PETEGRLQ-----HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 E + + + + + +G F G+ L + Sbjct: 591 LSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTPADELFKRAD 650 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGE 517 Q+ + + + + L+ +R A+ QG L+ QP + Sbjct: 651 AAMYQAKHAGRNQV-RFFDPEMQAELEQASALVVDLRQAIWQGQFQLHYQPQTANDGRII 709 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRF 575 G + +L + G ++P +F+PL + NL VLE LA + Sbjct: 710 GAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWADLPAAGNCKL 769 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ Q I R+ P+ + LE+TE + ++ +++L G Sbjct: 770 AVNVSARQFRQPEFVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQELRDLGI 829 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++DDFGTGY++ +LKRL + +KID FV+D+ ++ D IV +I + + + V+ Sbjct: 830 GFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQVI 889 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET++Q A L + G QGYL RP P A Sbjct: 890 AEGVETKEQLATLARYGCDAYQGYLFSRPVPAA 922 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 114/511 (22%), Positives = 205/511 (40%), Gaps = 21/511 (4%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 Y + + G + +F + V L + W L ++ E S++ Sbjct: 560 YPPELVIGRVSRIFRDNTSWSVAMLDGLARHGHWQGEMLDRRRSHE----WYPAELSISA 615 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF----RALEQAPEQ--- 346 + + + + R A DPLT LPN LE +Q Sbjct: 616 V-RDDAGAITNYVGVFADITVRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIAS 674 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ +G +R L ++ ++ +L G E L++ Sbjct: 675 SGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLV 734 Query: 406 SGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 S ++ L + + ++ + L + + + + LL Sbjct: 735 SHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAM 794 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 ++ ++ Q +++ L +R AL++G+ L+ QPI E Sbjct: 795 YRAKEAGKN-TYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEAL 853 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVN 578 + +L + G+++P +F+PL + L V+ + LA C PR ++N Sbjct: 854 EVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAIN 913 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L Q+ + ++ I+ + LE+TE N ++ + +L G R++ Sbjct: 914 LSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLS 973 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D +KID F++ + + +A I +I +A+ S SVVAE Sbjct: 974 IDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEG 1033 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET+ Q A L G Q LQGYL RP P A+ Sbjct: 1034 VETEAQAAFLCAKGCQLLQGYLFSRPLPAAE 1064 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 104/507 (20%), Positives = 210/507 (41%), Gaps = 28/507 (5%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + L F+ +G + Y W + + + T++ + Sbjct: 828 LASEKLEESFYSAMWDSIGVMGY------WQGEVINQRKNGEIY-----TQWLSISTIKD 876 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAG 349 + ++ + R + DPLT LPN L + Sbjct: 877 ADGKISQHIGIISDISERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTA 936 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D +F++ G + ++ + + M+ + + + G E +L+L + Sbjct: 937 VTLMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTD 996 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 EG H+ L ++ +++ + + + + E+ + L ++ Sbjct: 997 AEGAA-HVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAK 1055 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEIL 523 + Q +LL + +R+A++ + LLY QP + + G + ++ Sbjct: 1056 YEGRN-NFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALI 1114 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPL 582 + G+++P F+P+ + L A VL + +K LA+ G +VNL + Sbjct: 1115 RWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVV 1174 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + G + ++ + + P + LE+TE A ++E ++ + QL+ G R++IDDF Sbjct: 1175 QFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDF 1234 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+ + D +KID FV+ I ++ DA I+ +I +AK+ S +AE VET Sbjct: 1235 GTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETL 1294 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L +QGY +P P + Sbjct: 1295 EQLNFLIANSCDEIQGYYFSKPLPSTE 1321 Score = 43.1 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 15/184 (8%), Positives = 46/184 (25%), Gaps = 11/184 (5%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + G+ + + + F + L++L + L F ++ S A+ ++ Sbjct: 298 VGGTKWTLFFQTTPAFETRILPYGKPMLVALLGSTLTILSAFLAWF-LLSSRQLAESRYQ 356 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + + A ++ + + + + L V T Sbjct: 357 KLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINNVTKHPEFNTNL 416 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 ++ + + + + L ++R + R Sbjct: 417 ISDIP--------TKDEWQYRRKDGSRFIAEVNCRKLD--KNYYFTIIRDLTERKLAENR 466 Query: 322 WHLQ 325 Sbjct: 467 ILHL 470 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 91/466 (19%), Positives = 184/466 (39%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSV----CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + +A + S + ++ + + QA D LT L N Sbjct: 342 HKDGSMFLNELYIAPVSDTSGGAVGHFVGVLYDVTQIKRYQEDLEHQANYDTLTGLANRN 401 Query: 339 ALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L + + S + +DN + ++ G I ++ L +++ Sbjct: 402 LLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDG 461 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGN 447 + + ++ G E +L+L+ ++ + + + + + RF + Sbjct: 462 DTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPED 521 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E + LL ++ + + ++ + +++ L + + AL +L L Sbjct: 522 GEDSESLLANADTAMYRAKSSGRN-NFQFYTKEMNATSGERLSLESDLWHALKNDELFLV 580 Query: 508 AQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ G++ P F+P+ L + VLE+ + Sbjct: 581 YQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNL 640 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + R ++NL L +N + + + + P + LE+TE N E Sbjct: 641 QLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDV 700 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L+K G ++++DDFGTG+++ LKR D +KID F+ + ++ DA+I ++I Sbjct: 701 VVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTI 760 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA + V+AE VE + + L K G QGY I RP D Sbjct: 761 IALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDD 806 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 93/444 (20%), Positives = 179/444 (40%), Gaps = 15/444 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + R R A D LT LPN + + Sbjct: 371 AGAIRYFIGSFRDITEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQA 430 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G ++ + L ++ + + +L G E ++L Sbjct: 431 ALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISA 490 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + I + + +G F + + LL Q+ A Sbjct: 491 ANDASMVADKILASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKA 550 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 + ++ + ++ L +R A+++G ++ QP +N G++ ++ Sbjct: 551 AGKGR-FNFYSAEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVR 609 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G+++P F+PL + +L R D+ V+ + +VNL + Sbjct: 610 WQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNF 669 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + ++ ++ ++ + + + LEITE +++L G ++AIDDFGT Sbjct: 670 SRDDLPEQVRQVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGT 729 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL + +KID FV+DI ++ D M+V SI +A + L VVAE +E + Q Sbjct: 730 GYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQ 789 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 A+L +QGYLI +P P Sbjct: 790 LAILLSQECDEIQGYLIAKPMPAE 813 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 134/775 (17%), Positives = 263/775 (33%), Gaps = 60/775 (7%) Query: 10 NIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYI---FLAWMPLCVMLSILFIFGWRGVVP 66 ++ L + ++ ++ L I+H + L + L L F R + P Sbjct: 51 HLGQIIWLLALFALFHGINEWLDLLNIVHGASPLLDALRGLILPFSFLPLLEFARRLLQP 110 Query: 67 VLCGMFCTNLWNFHLSFLQTAVMLGSQTF----------------VVLCACAILRWQLGT 110 G + + + L SQ +L +LR+ Sbjct: 111 W-LGRWASPWLLIVPIAVVVLTALISQLDWLAISVASRYAIGLPGALLAGIGLLRYSRTD 169 Query: 111 RWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST-----FFGDADAIFT 165 + L L L+ D PL S + Sbjct: 170 EPWADHGRVRAALVVVGLAL---AIYGLLTGLIVPPLDIPLARSLNSQWFLEQTGVPVQL 226 Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 L +L I+ +L + H ++ + + + + AA ++ Sbjct: 227 FRALCALTAGAAIWYVLHTFEIGRERQLHQMASETQQALHQARQLGQEQQMILDAAADAI 286 Query: 226 LLL------LLCTPYENDFIA-----GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + L P + +I G+ W + Sbjct: 287 IGLDNRGRVTFSNPAATALFGYSAEELQGEDLHALIHLCKEGEAHPREECGLWRLLRFGG 346 Query: 275 LNYN--QNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTD 329 ++ + T + + + ++ R + +A D Sbjct: 347 QYHSGHETLRHKDGTPLPVEMNGSAIDDEKGVVIGAVLTFRDISERLSYEQELERRAHYD 406 Query: 330 PLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT L N L+ + L +D+ + ++ G + +I + Sbjct: 407 ELTGLANRVLLKARLQQTTAQAHRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQ 466 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYG 438 L +++E + + + G E ++VLS P+ + L R + + L Sbjct: 467 RLQTVVREADTVARHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTAS 526 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F + + LL ++ L E ++ +K++ +L+ +R A Sbjct: 527 VGVSLFPRDGTDVDTLLRNADAAMYRAKHLGRN-NLQFYSEEMNLSLSKRLRMLSQLRQA 585 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ +L L+ QP + G + ++ + G+++P +F+PL + L V Sbjct: 586 VERNELCLHYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWV 645 Query: 556 LESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + R SVNL + I + ++ ++P+ + LE+TE Sbjct: 646 LREACRQGVAWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTET 705 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 +N + S+ + + G R+A+DDFGTGY++ L+R D+IKID FV D + N Sbjct: 706 ALIANPQQSVQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNP 765 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A IVR++ +A+ +AE ET + L + G +QGY I RP P + Sbjct: 766 GNAAIVRTVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGE 820 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 121/575 (21%), Positives = 216/575 (37%), Gaps = 39/575 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--------------LLCTPYE 235 I + A + + E R T+ + ++L+ + Sbjct: 324 ITNLRQAISDREQAFSDIQISEARLRTIFDASPDALLISDAQGAITMANSRVEEVLGYMA 383 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF-I 294 D I + + + R ++ L L L+ +E + + Sbjct: 384 EDLIGQSIEALVPKSVNSAHSEHRSAYIEAPD--RRLMLGGRTIKALRKDGSECEVEINL 441 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 V V + +R + + D LT LPN L Sbjct: 442 SRVDTDQGVMIASALRDISERRRAEGKIAELSFFDHLTGLPNRTLLMDRMKLAMTASYRD 501 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + +DN + ++ G + +R I L+ ++E++ + +L G E L++L Sbjct: 502 GKHCALLFIDLDNFKALNETLGHEIGDQLLRDIAPRLVASVREDDTVARLGGDEFLVLLV 561 Query: 407 GP-ETEGRLQHMVNIL-------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 TE + V + S+ NN F G+ LL Q Sbjct: 562 DLARTESEAANQVEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFGHVV-ADDLLKQS 620 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEG 516 ++ A ++ + + K+ + +R L + LL+ QP N Sbjct: 621 DLAMYKAKAEGGA-SIHFFDPKMEEAVIKRAKIEADLRQGLIKKQFLLHYQPQIFSNGRM 679 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPR 574 G + ++ G++ P F+PL + L + VLE+ K LA + Sbjct: 680 TGVEALVRWQHPVRGLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLT 739 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ Q I + + +P+ + LE+TE N + + + L G Sbjct: 740 VAVNVSVQQFHQPEFVDHIQEVIRVTGANPERLKLELTESMLAENVQDIIKKMFALKADG 799 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++DDFGTGY++ LK+L D +KID FV+D++T+ DA I ++I +LA++ LSV Sbjct: 800 IGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSV 859 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET+ Q+ L G QGY RP P+ + Sbjct: 860 IAEGVETEAQRNFLETSGCHSCQGYFFSRPLPIEE 894 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 97/565 (17%), Positives = 196/565 (34%), Gaps = 36/565 (6%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 R I A + A A + L + T + + Sbjct: 139 SLRNITERREADAYKAQLAAIVESSND--------AIIVQDLNGIITSWNAGAEGLFGYR 190 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ-------GVETEYSLAFILAVL 298 +I + + +CL+ + ++ ++ + Sbjct: 191 ASEVIGSSVEILIPPDLRE--EEGDIMCLIKSGRRADHFETVRWGKGRKPIDVSVTISAM 248 Query: 299 ISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + ++ +VR + + R A D LT LPN L Sbjct: 249 KDRAGNIIGASKIVRDITQRKESQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYS 308 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + ID + ++ G + ++++ + + +++ + + ++ G E +++LS Sbjct: 309 IRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADTVSRVGGDEFVVLLSR 368 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ET L S+ L + + N + L Sbjct: 369 IETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNGKDASSLTRNADAAMYS 428 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + E ++ +++ L + +R AL + ++ QP G + Sbjct: 429 AKGQGRNR-YQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQPQIELATGRVIGVEA 487 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLM 580 ++ + G+++P F+P+ L +L +VN+ Sbjct: 488 LMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQWHEHQGFQGTIAVNVS 547 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + Q + ++R+ P+ + LE+TE ES + + L G ++AID Sbjct: 548 AVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVVQKMGILESHGIKLAID 607 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L++ D +KID FV+D+ + I+R+I + ++ L V+AE VE Sbjct: 608 DFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVE 667 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ 725 T+ Q L + QGYL RP Sbjct: 668 TEAQARFLQDIECTESQGYLYARPM 692 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 100/428 (23%), Positives = 186/428 (43%), Gaps = 17/428 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP-----E---QEAGKSFCCLRIDNLEFMSRHYG 368 + H A D LT LPN + + + L +D + ++ G Sbjct: 1045 RAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLG 1104 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + +++ ++ ++ N+ + +L G E ++L E+ + + S+ Sbjct: 1105 HEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKV 1164 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 ++ + + + G+ E + L+ ++ + E+ + Sbjct: 1165 FAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKEQG--NSYQFYEKGMETAA 1222 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 K++ L +R AL+Q +L LY QP N E + ++ + G++ P +F+PL Sbjct: 1223 VKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLA 1282 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L A +L + + GP +VN+ L ++++ +I+ + K Sbjct: 1283 EETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETG 1342 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + LEITE A +++ +L + G + AIDDFGTGY++ LK DI+K Sbjct: 1343 LPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVDILK 1402 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ D+V+N DA I++ I LA + L VVAE VETQ Q+ L QG+ + Sbjct: 1403 IDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYL 1462 Query: 722 GRPQPLAD 729 P A+ Sbjct: 1463 SEPLSAAE 1470 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 102/499 (20%), Positives = 197/499 (39%), Gaps = 22/499 (4%) Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 V + L P + + +Y + A + + Sbjct: 491 VVQLFDQESGAPLPSPVEQCLQDREVYGV-RESAALRHRSGRDYGVQISAAPIAGRDGRV 549 Query: 306 LY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCC 354 L + + + L ++ A D LT LPN + + Sbjct: 550 LGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDRVHQACQSGRRHGRRFAVIF 609 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR- 413 + +D+ + ++ G + ++++ + L ++ ++ + +L G E +++LS + Sbjct: 610 MDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICRLGGDEFVVLLSDLDDVEVD 669 Query: 414 -LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + ++ T +++G F G+ E L+ + +S Sbjct: 670 GVAEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPGDGEDPDTLMKRADAAMYRSKREG 729 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARL 526 + V + ++ L +R AL G +++ QP+ + + +L Sbjct: 730 RNR-YHFFSKAVDDAASARLQLEADMRRALAAGQFIVHYQPVVHGRTRDAVAVEALLRWD 788 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLL 585 + G+ +P F+P+ + L VL + L G +VN+ P+ L Sbjct: 789 RAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWSGTALGGISVAVNVSPVQLA 848 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + + + + + EITE + E+++ + +L G RIAIDDFGTG Sbjct: 849 QADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEMLRRLKGLGVRIAIDDFGTG 908 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR D +KID FV+D+ + D +VR+I +A++ L VVAE VET+ Q Sbjct: 909 YSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMARSLRLHVVAEGVETEAQA 968 Query: 706 ALLHKLGVQYLQGYLIGRP 724 A+L + QGYL RP Sbjct: 969 AILAAMECPAFQGYLFARP 987 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 108/589 (18%), Positives = 219/589 (37%), Gaps = 29/589 (4%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + L V+I ++ + + R + Q + + + ++ Sbjct: 360 AYVVLGLFVVIGAVISWLVRRQVRQMFLLQRDKELILNAAGDGIVGVDRTGRASFVNPAA 419 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLG--VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + DF+ Y+V ++ G V + +P LC+ + F + Sbjct: 420 ARMLGYDAEDFLRRYVVETIPVVLANGEHVMEQDHPISQTRQLEQGLCVRSDLDAFRRRD 479 Query: 286 ETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWH-------LQALTDPLTLLP 335 T S+ ++ LI + + + + R + R + D LT LP Sbjct: 480 GTIISVEYVATPLIGSAGQHEGAVLIFKDLTRQQQAEERLEEKKQLLDHMSNHDSLTGLP 539 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R + + S + +D + ++ G + + S+ R + + Sbjct: 540 NRRLFQDRLYHAIERARRSSSEMSVLFIDLDRFKKINDSLGHELGDKLLISVARRMQSHL 599 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 + ++ L +L G E +++L + L S + L + R+ Sbjct: 600 RRSDTLARLGGDEFVVILEESSHSHFAAVIARNLLNELSEAFDVESHRLFVTASIGISRY 659 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + E + L+ + + ++G+ + + +R AL Sbjct: 660 PYDAEDVVGLMSSADAAMYHAKSRGRN-NFQFYAPEMNGRAQDFLEMETQLRDALALEQF 718 Query: 505 LLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +Y QP + G + +L + G++ P F+ L + VL + + Sbjct: 719 EVYYQPQYDMRDQTLVGAEALLRWNHPERGMVPPGDFIALAEETGAIVPIGEWVLMQVCR 778 Query: 562 WLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + R +VN+ N++ + ++ ++ + + + LEITE + Sbjct: 779 QNRQWMDEGLTPVRVAVNISIAQFR-SNLSQTLEQVLEQSGMPAELLELEITESMLMEDE 837 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E ++ + +L + G I+IDDFGTGY++ L++L D +KID F+ +V N DA I Sbjct: 838 EETITLLNELKEKGLHISIDDFGTGYSSLSYLRKLPVDKLKIDRSFIAHVVHNQSDAAIT 897 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 SI L + L ++AE VE ++Q+ L + QG+L RP D Sbjct: 898 GSIIALGQNMDLRILAEGVEHEEQRDFLLQHRCYIAQGFLYARPMTAED 946 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 101/463 (21%), Positives = 189/463 (40%), Gaps = 25/463 (5%) Query: 290 SLAFILAVLISFSVCLLYMVRIYH----RSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 LAF + L + + L + A D LT LPN R L Sbjct: 118 ELAFQSKEKAKRAAELAIVNQDLTFQSKEKAKLAEELNDLAFYDTLTGLPNRRLLIDRLH 177 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 Q + + +D+ + ++ G + + + L +++ + + +L Sbjct: 178 HALASNVRQGCESAVMFIDLDHFKDINDTLGHEVGDLLLIQTAQRLESCLRKGDTVARLG 237 Query: 398 GSELLLVLSGPE-----TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 G E +L+L + + + + + + + + FD Sbjct: 238 GDEFMLILENLDENPIEAATKAKAIADKILAELNKPYQLDMHKCHSTVSIGAVFFDHQGN 297 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 T + L+ Q Q+ L + + ++ L N +R A+++ LY Q Sbjct: 298 TAEDLIKQADIAMYQAKQAGGNL-IRFFNPKMQESINARITLENELRIAIEKSQFHLYYQ 356 Query: 510 PIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + ++ + G++ P F+P+ + L V+E+ + Sbjct: 357 IQMDSDNRVLGAEALIRWTNPEHGLVLPATFIPIAEETGLILSIGKWVIETACAQIKVWQ 416 Query: 568 --CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + +VN+ QK+ ++ +R+ I + LE+TE + E ++ Sbjct: 417 KKSQTRDLTLAVNVSAKQFRQKDFVDQVQSAVQRHAIPGNLLKLELTESLLQYDTEVTIA 476 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ L+K G + ++DDFGTGY++ + LKRL D KID FV+DI T+ D IV++I Sbjct: 477 MMKALNKIGVQFSLDDFGTGYSSLQYLKRLPLDQFKIDQSFVRDIATDNNDKAIVKAIIA 536 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+ + V+AE VET++QQ LL G QGYL +P P+ Sbjct: 537 MAQILDIDVIAEGVETEEQQQLLLGKGCTLYQGYLFSKPIPID 579 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 98/516 (18%), Positives = 197/516 (38%), Gaps = 19/516 (3%) Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL-LNYNQNFLQGVETEYS 290 A + P F + + + ++ T + + + TE Sbjct: 169 LYRILGLDAAHAPPTFERLLQAVPADEQPLLVQSFTSLRTEGVPFSLEHRLVHADGTERC 228 Query: 291 LAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-- 346 + + ++ L +V+ + R A D LT LPN L EQ Sbjct: 229 VLHQAESGRDPNHAIILRGIVQDITERKMQQGRIEYLANHDALTGLPNRNLLSDRMEQAM 288 Query: 347 ------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + L +D + ++ +G + +R + L +++ + + +L G E Sbjct: 289 SQARRTGQLVAVMVLDLDRFKHINDSFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDE 348 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +++L T+ + + + L + + + LL Sbjct: 349 FVVMLVNLATQADADVIARKILDTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKT 408 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 + H + + +Q +L N + A+ +L LY QP + Sbjct: 409 ADAALYAAKEHGRN-CYRFYTRELGARVEEQTILENALHQAVANHELELYYQPKVDLKTG 467 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGP 573 + G + ++ + G++ PD+F+P+ L VL + + Sbjct: 468 QISGVEALIRWRRPGIGVIPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPI 527 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R +VNL Q+++A + + ++P ++ LE+TE + + + + +L Sbjct: 528 RIAVNLSARQFRQQDVAAMVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKAL 587 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +++DDFGTGY++ LK L D++KID F+ D+ T+ A + RSI +A++ + Sbjct: 588 GVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHME 647 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET+ Q + L++ +QGY P + Sbjct: 648 TVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVTGDE 683 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 91/465 (19%), Positives = 180/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + + + + + S+ + A D LT LPN Sbjct: 266 RKNGEIYPKRLTINAVRNQAGEVENYIGIFSDISESKATELKLERLAYYDALTQLPNRML 325 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + +D + ++ G ++ + + L ++ + Sbjct: 326 FHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAAD 385 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ G E ++L+ + + + + I + +G + N Sbjct: 386 TVARMGGDEFTVILADISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALYPDNG 445 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++ L ++ E ++ T++++ L + + A++ L +Y Sbjct: 446 NDVETLTKNADMAMYRAKESGRG-NYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYY 504 Query: 509 QPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + G + ++ + DG ++ P +F+P+ + L V+ + A Sbjct: 505 QPKLNMQSGIMVGMEALVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCAR 564 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R +VNL + I + + + +EITE + E+++ Sbjct: 565 WVRETGMNLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAI 624 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +EQ+ + G IA+DDFGTGY++ LK+ +K+D FVKDI + D IV +I Sbjct: 625 ATLEQISRLGIHIAMDDFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAIL 684 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LAK +L VVAE VETQ+Q + L + QGY +P D Sbjct: 685 SLAKVLNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPLSAVD 729 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 98/465 (21%), Positives = 188/465 (40%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y L ++ + + + + + + QA D LT LPN + Sbjct: 434 RKNGEVYPLNVSISRCTNSAGIPSHYVAIFHDISEIKRSEEKLQHQAYHDALTNLPNRKL 493 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + L IDN ++++ G ++ I LL ++ + Sbjct: 494 FHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQED 553 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 +L G E ++++ E + + + + + + F + Sbjct: 554 TTARLGGDEFIILMPEIEDPHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDA 613 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 +T + L+ ++ + +++ L + AL + + +L+ Sbjct: 614 DTPEDLIKNADIAMYRAKEAGKN-GYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFY 672 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + E G + ++ K DG ++ PD+F+P+ + L + D VL++ + Sbjct: 673 QPQVDLESEHVIGAEALIRWQKPDGQLVYPDEFIPIAEECGLITQIDHWVLKAACRQANK 732 Query: 566 HPCD-KKGPRFSVNLMPLTL-LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + + SVNL + + R+ + + + + + LE+TE S+ ES+ Sbjct: 733 WREQSGRNFKMSVNLSSEQFAKDQELVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESA 792 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + QL G IAIDDFGTGY++ +K A +KID FVKDI ++ D I SI Sbjct: 793 IAIMTQLTALGVSIAIDDFGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASI 852 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L + ++ V+AE VE Q Q L + Q +QGY G+P Sbjct: 853 ISLGRNLNMEVIAEGVEEQTQIDFLKQHRCQQVQGYFYGKPCAAE 897 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 110/551 (19%), Positives = 216/551 (39%), Gaps = 21/551 (3%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + R + + + A ++ A ++ + E V + Sbjct: 771 RMEARLLQAATVFDSSAEGITITAPDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQSGFQ 830 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHR 314 R +L++ A+ T + + + ++ + + + Sbjct: 831 DRRFYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAVKDAQGKVAHYVGVFSDITE 890 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + + QA DPLT LPN L E G + + +D + ++ Sbjct: 891 LRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNINDT 950 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---- 422 G + + + L LM+E++ + +L G E L+V+ + H+ + Sbjct: 951 LGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQ 1010 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + +G F + + L+ ++ + + ++ Sbjct: 1011 ASPVTVE-HEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGRN-TYEFFTKDLT 1068 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + ++ + +R A+++G+L +Y QP + + G + ++ L+ G++ P +F+ Sbjct: 1069 QTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRWLRPQQGLVLPGEFI 1128 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFK 598 L + L V + AT P SVN+ + + I R + Sbjct: 1129 KLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLE 1188 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + + LEITE S+AE+S+ ++ L G + IDDFGTGY++ LKRL + Sbjct: 1189 LSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLN 1248 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +K+D FV+ + +T D I R++ L + L+V+AE VET+ Q+ L G +QG Sbjct: 1249 KLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQG 1308 Query: 719 YLIGRPQPLAD 729 YL GRP P D Sbjct: 1309 YLRGRPMPFDD 1319 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 104/432 (24%), Positives = 185/432 (42%), Gaps = 15/432 (3%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDN 359 + R + R + A D LT LPN L + E A + L +DN Sbjct: 312 LHREIQDRQRDQERIYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDN 371 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + I + L +++ + + +L G E +L+L G +G + Sbjct: 372 FKHVNDSLGHRIGDALLVEIAQRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAK 431 Query: 420 ILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + +H + L + F + + L+ ++ A + Sbjct: 432 MQEAALQPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKADGRN-SFRFF 490 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + Q+ + + L N +R AL++ L L+ QP + G + +L + G ++ Sbjct: 491 TPTMQAQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVS 550 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ VL + L L T +VNL + Q + + Sbjct: 551 PAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELV 610 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 RL Y + P + LE+TE A ++ +++ ++QLH G R+++DDFGTGY++ LK Sbjct: 611 DRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLK 670 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R Q +KID FV+D+ + D IV +I +A+A + AE VET Q L + G Sbjct: 671 RFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGC 730 Query: 714 QYLQGYLIGRPQ 725 QG+ RP Sbjct: 731 DEAQGFYFSRPL 742 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 104/581 (17%), Positives = 213/581 (36%), Gaps = 26/581 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 + ++++ L L R + +++ +R+ + S WL Sbjct: 458 LITEMVADIGYALDRIDLVAEQARTSAALRESEVKYRKVLETSQDG-FWLLNRDWLLTEV 516 Query: 225 V-LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + + + ++ + + + + + Sbjct: 517 NDAYIEFSGYRREELVGMHVTQLDASDASEMARHIASAVEDGNAT--------FETRHRT 568 Query: 284 GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN------- 336 + + + C VR R + + D LT LPN Sbjct: 569 KSGELKPVEVSVTFDAGRAACFSLFVRDLSRRDEAQEHIRRLSHFDTLTGLPNSSLFADL 628 Query: 337 -FRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +A+ A S + ID+ + ++ G + + I + L + Sbjct: 629 LRQAIGNAQRSGESLSVMYIDIDHFQHINDTLGHRIGDRLLVEIAGRFRNALCAENTLAR 688 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 L G E L++L + E ++ + + + + + + + E + Sbjct: 689 LGGDEFLILLPHAQVECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFET 748 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL + ++ + + ++ + L +R AL++ +L+L+ QP + Sbjct: 749 LLQRADTATNRAKSDGRN-TYRFFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQID 807 Query: 514 ----KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 G + ++ + G+++P +F+P+ L V+++ L L Sbjct: 808 LVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLA 867 Query: 570 KKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + VNL Q+N+ + R+ + + LE+TE + +++ ++ Sbjct: 868 GLQLGQVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMD 927 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 LH+ G R++IDDFGTGY++ LKR + D +KID FV+D+ + IV +I LA+ Sbjct: 928 ALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLAR 987 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VE +Q A L G Q +QGYL RP P + Sbjct: 988 TLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDE 1028 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 89/465 (19%), Positives = 175/465 (37%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + ++ A ++ + + + + NR+ AL D LT L N R Sbjct: 160 RRDGYDFWWAVTVSTVCDSDNTVTNYVISGVDVSELKEANRKMQQMALYDSLTGLANRRL 219 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 EQ + L +D + ++ G ++++ + L ++ + Sbjct: 220 FVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRAKD 279 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L+ + + + I + + + Sbjct: 280 TVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPTDG 339 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L+ ++ H E ++ KQ+L+ +R AL + L Sbjct: 340 ANADVLMKNADLALYRAKEHGRDR-YHFYTEELNAHALKQLLMEQELRHALQFEEFTLGF 398 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + + ++ G++ PD F+ + + L VL++ + Sbjct: 399 QPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKM 458 Query: 566 HPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VNL + I + P+ + LE+TE + ++ Sbjct: 459 LQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVT 518 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +++L + G +AIDDFG+GY++ LK+L + +K+D FV+DI ++ D I +I Sbjct: 519 NKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAII 578 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VVAE VET +Q+ L + QGY +P D Sbjct: 579 AVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFED 623 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 97/486 (19%), Positives = 176/486 (36%), Gaps = 22/486 (4%) Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRS 315 + QN Y L + L + + + + Sbjct: 125 GHDQEECILEQILTTQRRVEQNDFLHDGRHYHL--VGTPLKNHDGAISRVVLLYTDITER 182 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 A D LT LPN L+ + + +D + ++ Sbjct: 183 RAAAEEIERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKEVNDTL 242 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---R 424 G ++ + L ++ + + +L G E +++L G + + L + Sbjct: 243 GHGTGDQLLQVVSERLTACLRSCDTVARLGGDEFVVLLPGITERDCVGDIAAKLLQSLCK 302 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + + +++ L + + Sbjct: 303 PVQLDAREVFTSGSIGISLWPIDGDSVSTLFKNADTAMYHAKEQGRN-TYRFYTPQMHAT 361 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPL 541 + +Q+ L N +R AL++G+L L QP + E G + +L + G++ PD+F+PL Sbjct: 362 SMEQLTLSNDLRYALERGELHLCYQPQVSFETGGLIGVEALLRWIHPKLGMIPPDRFIPL 421 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 L VL + R +VN+ + + + + + + Sbjct: 422 AEDTGLIVPIGTWVLHEACRQAMMWVAQGLPSLRVAVNISAKQFRESDFSDTVKAVLQTT 481 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 ++P + LE+TE N + ++ L G +AIDDFGTGY++ LK D + Sbjct: 482 GLAPNLLELELTEGMLIENVTQTKLTLQSLKDMGVTLAIDDFGTGYSSLSYLKHFPLDRL 541 Query: 661 KIDGVFVKDIVTNTLD-AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 KID FVK+I + D A IV ++ L + L+V+AE VE Q Q LH LQGY Sbjct: 542 KIDKSFVKEIAEKSGDAAAIVEAVVALGHSLKLTVIAEGVEQQDQVDFLHNRKCDELQGY 601 Query: 720 LIGRPQ 725 RP Sbjct: 602 FFSRPL 607 >UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Methylobacterium RepID=B1ZFY0_METPB Length = 833 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 154/764 (20%), Positives = 283/764 (37%), Gaps = 67/764 (8%) Query: 14 FTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFC 73 ++L F + ++ + ++ ++ + + L L I+ P+ Sbjct: 62 WSLHFVAMLAFRPSAQ--AAYGLLPTAAS--IGIAVTGALIALLIWCRADHHPLKLAAAG 117 Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 + V + ++L A + LG +T+ L LG Sbjct: 118 MVMAAAIAGMHYAGVGAMAANSLLLFDGAYVHASLGLCAILAVTALARAGDLTGLGRRIE 177 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + + ++ + G F ++ + + ++ + + + ++ + Sbjct: 178 VSLWLALAICGLHFTGMTALTVAPAAP-----LEEGGAVLGSTQLGLAVGLVSLVVLAAG 232 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 A ++ R + + + R L LA +L+ E + L T Sbjct: 233 LAALLMQRHLMRRRMDELSRMRLLGNLAHEVLLIHRDGRVVEINQAGLRLFE------TT 286 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYN---QNFLQGVETEYSLAFILAVLIS---FSVCLLY 307 + P L+L LL + L+ E E A LAV + ++ L Sbjct: 287 LQEIVGRPLLDLFADADAPALLRRSRCRPEELRPEEFEIRTAAGLAVPVELSCRAIEYLG 346 Query: 308 ------MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 +R + R AL D LT LPN LE+ E A + Sbjct: 347 RPATAVALRDLSQRRRDEARIRHLALHDALTDLPNRTLLEERLSLALETAAENGASVALV 406 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ +G + + +L ++ + L ++ G E ++VL+ T + Sbjct: 407 YLDLDRFKPVNDFHGHAAGDALLVQAAKRMLAELRPTDTLARIGGDEFVIVLAHTRTLAQ 466 Query: 414 LQHMVNILNS---RQIHWNNT----------------------GLDMGYGAAWGRFDGNQ 448 + L + R H +++G A + + Sbjct: 467 IAETAARLVAALGRPFHLEGQNEGEGKSEGKGEGTSEGKSEGLRIEIGASAGIAVYPSDG 526 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T + L + + E + Q + + + + A+ +G+L LY Sbjct: 527 STAETLKRAADTALYRVKDEGRG-TVRFFEAAMDEQLQARRRIEHELSGAIPRGELQLYY 585 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI N E ++ ++ + G + P F+PL Q + R VL++ A Sbjct: 586 QPIVNGRTGEIETFEALIRWHHPERGCVPPADFIPLAEQTDQIGRIGAWVLDTACAAAAA 645 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 P R SVN+ P Q A + + RY + P ++LEITE +A ++ Sbjct: 646 WP---HPWRVSVNVSPKQFRQPGFAAGVAAVLGRYGLPPGRLVLEITEGVFIQDATMAVE 702 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L G R+A+DDFGTGY++ L+R + D IK+D FV+ + + IVR+IT Sbjct: 703 VLTALRTLGVRLALDDFGTGYSSLSYLQRFKFDKIKVDQSFVRRLGRHADTLTIVRAITH 762 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L L V E VETQ+Q A+L +LG +QGYL RP P+ + Sbjct: 763 LGHNLGLQVTVEGVETQEQLAMLRELGCDQMQGYLFARPAPMTE 806 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 100/472 (21%), Positives = 174/472 (36%), Gaps = 19/472 (4%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLT 332 N + + + + I L ++ + R + A D LT Sbjct: 1030 NLEFRVVHPDGSIHWVQAIGNAEYDSQGHPIRLRGLIMDVTERKTSQERLNYMAHHDHLT 1089 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN L+ + + + +D + ++ G ++ + + L Sbjct: 1090 DLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQRLR 1149 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 +++ ++ + ++ G E + VL E +V L + M Sbjct: 1150 QVLRSSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGL 1209 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + LL ++ E ++ + VL N +R AL + Sbjct: 1210 SLFPDDGMDTAILLRNADSAMYRAKEEGRN-TYCFYAEEMTSAAFEYVLFENALRGALKR 1268 Query: 502 GDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + L QP + G + +L + GI++P +F+P+ Q L VL Sbjct: 1269 NEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYR 1328 Query: 559 LLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 T +VN+ + Q N + + + LE+TE Sbjct: 1329 ACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTEGLVM 1388 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 E + +E L G +AIDDFGTGY++ LKRL + +KID FV+DI +T D Sbjct: 1389 HQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDM 1448 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I ++ L KA +L ++AE VE + Q L + G QGYL +P P + Sbjct: 1449 AISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEE 1500 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 106/560 (18%), Positives = 202/560 (36%), Gaps = 29/560 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYL----VPVFFI 249 +R E++ ++ A + Y + Sbjct: 509 ITKRKRAENELRQAEEKYRSIFENATEGIFQSSPSGSYISANPALARIYGYDSPQELQHH 568 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLL---NYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + +G P + S L ++ + + ++ + +L Sbjct: 569 LTDIGRQLYVNPDRRQQFVHSILEQGQVTDFESQVYRKDGSVIWISENARAVRDRQGNIL 628 Query: 307 ---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 V + H QA D LT LPN + + + L Sbjct: 629 YFEGTVEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFL 688 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + ++ + + LLP ++E + + + G E L+L +T Sbjct: 689 DLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPHVQTPADSV 748 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L + L + + + E LL ++ Sbjct: 749 KIAERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNADAALYRAKEEGRNG 808 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 M++ + + + L + + AL+Q +L +Y QP N E + ++ Sbjct: 809 LYC-YTPMLNSRGHELLALESELHKALEQQELDVYYQPQINAATGEILRLEALVRWQHSQ 867 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKN 588 G+++P F+ L + L VLE+ G +VNL Q + Sbjct: 868 LGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGFPGLGTAVNLSVRQFQQPH 927 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++ + ++ + LEITE A N + + +L + G IA+DDFG+GY++ Sbjct: 928 LVQQVAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHELDQMGVGIALDDFGSGYSS 987 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L++ IKID F++++ + D IV+++ L + +LSVVAE VE+Q Q +L Sbjct: 988 LNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLNLSVVAEGVESQSQLKVL 1047 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 LG +QGY G P A Sbjct: 1048 RSLGCDIIQGYFFGPPIAAA 1067 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 105/480 (21%), Positives = 198/480 (41%), Gaps = 24/480 (5%) Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-LLYMVRIYHRSEWLNRRWHLQALTDP 330 Y + G ++ L+ + + + R + R + A DP Sbjct: 376 FSEGKYYALEMPGGRRDFELSVASKAGKEKGIQRYVMLSRDITERKENEARINNLAFFDP 435 Query: 331 LTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN R L+ Q A + + +D+ + ++ + G + + ++ Sbjct: 436 LTQLPNRRLLQDRLEHAIATGQRQAALGALLYIDLDDFKTLNDNRGHHVGDLLLIAVADR 495 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRL---------QHMVNILNSRQIHWNNTGL 433 L ++ + + +L G E L++L G + + ++ LN + Sbjct: 496 LRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQAAQQVQQIAEKILQSLNQV-YVLDEQEY 554 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 F + ++ LL + + A L + + ++ L N Sbjct: 555 FNSPSIGICLFGDDDADIEDLLKRADQAMYHAKAAGRN-TLRFFDPHMQASAAQRFALQN 613 Query: 494 TIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 IR AL LY QP + G + ++ L + G+++P F+P+ + L Sbjct: 614 EIREALLFNQFKLYYQPQVDRTGRITGAEALIRWLHPERGMISPMDFIPIAEESGLILPL 673 Query: 552 DLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 +L++ + L + S+N+ Q + +++ R +P + L Sbjct: 674 GNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQQPDFVTQVLAAVTRTGANPHQLTL 733 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE +N + + ++ L G + ++DDFGTGY++ LKRL + +KID FV D Sbjct: 734 ELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLPINELKIDKSFVND 793 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I+T+ DA I R + LA++ L+V+AE VETQ+Q+ L + G + QGY G+P + Sbjct: 794 ILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQGYYFGKPVGAEE 853 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 107/479 (22%), Positives = 186/479 (38%), Gaps = 29/479 (6%) Query: 275 LNYNQNFLQGVETEYSL-AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 +++ GVE S A +L+ + L+ V R A D LT Sbjct: 169 MDHRIVLDDGVERIVSQHAELLSADDGRTSRLVGTVHDITERTLAEERIRYLAHHDTLTA 228 Query: 334 LPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN E+ + L +D+ + ++ G ++ L+ Sbjct: 229 LPNRFQFEERMEQALAFAQRNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAGRLMK 288 Query: 386 LMQENEKL------------YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNN 430 ++ ++ L ++ G E ++L+ + + S++ Sbjct: 289 CLRRSDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGG 348 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + +G F + E LL + ++ +++ Sbjct: 349 HEVFVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRN-TYQYYSGSMNAMALERLT 407 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L N +R AL + + L QP + G + +L+ + ++ PD F+PL + L Sbjct: 408 LENNLRWALKRNEFRLCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGL 467 Query: 548 SARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 A VL + T R +VNL L + +A + ++ + + P Sbjct: 468 IASIGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSH 527 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE SN E + I L K G R ++DDFGTGY++ RL R D +KID F Sbjct: 528 LELEITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSF 587 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 V+DI + A + +I +A+ L+V+AE VET +Q A L G +QG+L +P Sbjct: 588 VRDISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPL 646 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 112/488 (22%), Positives = 203/488 (41%), Gaps = 26/488 (5%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + S+L + Q +G Y + ++ ++ + + ++ A Sbjct: 523 YEGSSLKMEFRIQGEKEGEMWVYLTGDSIRDENGQAIRIIGSITNISEKKQQEKQIMHLA 582 Query: 327 LTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN R A+ A + +D + ++ G I+ Sbjct: 583 FHDGLTGLPNRRLLRSRLELAMTDADRYNYKLGLLLIDLDRFKVINDTLGHQAGDELIQK 642 Query: 379 ICRTLLPLMQENEK----------LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 + L M+ + + +L G E +++L+ LQ N++ Sbjct: 643 VADVLELTMRSPDTHSRAKQEHTTVARLGGDEFIILLTHITDVSDLQASANLIIEKFKEP 702 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 N + + + L G ++ + ++ ++ T Sbjct: 703 FFIQNQDVFTSASIGISVYPDHGRDYDSLTGNADIAMYRAKENGKNQ-MEMYSSEINTLT 761 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ + N +R AL++ + +L+ QP N E G + +L D GI++P +F+PL Sbjct: 762 MERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLA 821 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL+ + P+ SVN+ L +K+ + + + Sbjct: 822 EETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDTQ 881 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + Q + LEITE A N + SM +++L + G +IAIDDFGTGY++ LK+L IK Sbjct: 882 LPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIK 941 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F++D+ + D IVR+I +A + L+V AE VET+ Q+ +L + YLQGYL Sbjct: 942 IDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLY 1001 Query: 722 GRPQPLAD 729 +P P + Sbjct: 1002 SKPLPAEE 1009 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 107/551 (19%), Positives = 208/551 (37%), Gaps = 51/551 (9%) Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 LL TP E F+ + + + L V + F + Sbjct: 534 LLGRTPVECFFLREEIQERRRALSSETGFDPASDIDVLLARVRLGSVDQGQWTFQRKDGE 593 Query: 288 EYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNR------------------------ 320 ++ + ++ L + L++ + Sbjct: 594 KFIVELSISALHPEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSELESEV 653 Query: 321 --------RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 + A D LT L N L+Q + + + + +D + ++ Sbjct: 654 LERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTIN 713 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS- 423 G + ++++ L ++ N+ + +L G E +++L E + + + Sbjct: 714 DSLGHHIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDA 773 Query: 424 --RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 I + L + + + T+ L+ Q+ A+ + Sbjct: 774 LRPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRN-TYCYFTAEM 832 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 + + + +R A+D+ + ++ QP+ + Y+ ++ G++ P +F Sbjct: 833 NAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQF 892 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 + + + L VL L + + P ++NL P+ N+ I R+ Sbjct: 893 ITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICRIL 952 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + Y ++P + LEITE + E ++ ++ L GFR++IDDFGTGY++ LKR Sbjct: 953 RDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPV 1012 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID F+ D+ N D IV +I LA + LSV+AE VET++Q LL L + Q Sbjct: 1013 DTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQ 1072 Query: 718 GYLIGRPQPLA 728 GY + +P P Sbjct: 1073 GYYMAKPMPAE 1083 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 113/558 (20%), Positives = 207/558 (37%), Gaps = 33/558 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV-GKLRY- 260 DI + S SV +L+ P + + Y+ P F I + + + Sbjct: 482 DITEQKRADLALRLQSRALDASVNAILITAPSPSGNLIEYVNPAFMRITGYDLDEVIGHD 541 Query: 261 ------------PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 + A++ ++ + + +A + Sbjct: 542 CRVLQRDDRDQEGVALIREALAANREVSAVVRNYRKDGALFWNQLFIAPVPNAEGVITHH 601 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + ++ + QA D LT LPN L G + L + Sbjct: 602 IGVINDVTELIRYQEQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVAVVFLDL 661 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ-- 415 D + ++ G + + + L + ++ + + G E ++V++ E L Sbjct: 662 DGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVARHGGDEFVIVMTDTVDEQSLITW 721 Query: 416 -HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + + + T L +G F + + + L+ + ++ Sbjct: 722 MERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDMGRN-TF 780 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + ++ ++ L +R AL + LL+ QP + + G + ++ + G Sbjct: 781 QFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAG 840 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIA 590 ++ P F+PL + L VL + P R SVNL Q+NIA Sbjct: 841 LVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVNLSARVFQQRNIA 900 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++++ + P+ + LE+TE NAE ++ + +LH G +AIDDFGTGY++ Sbjct: 901 KLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLS 960 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D +KID FV DI + D I +I LA + L V+AE VET Q L + Sbjct: 961 YLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKE 1020 Query: 711 LGVQYLQGYLIGRPQPLA 728 +QG+ +P Sbjct: 1021 RACDEMQGFYFAKPLSTE 1038 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 93/430 (21%), Positives = 172/430 (40%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSR 365 + R A DPLT LPN Q + +D + ++ Sbjct: 575 DRKTTEERLTYLAQFDPLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFADLDRFKIVND 634 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + + L ++ + + +L G E L+LS + + S Sbjct: 635 TMGHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDATLIAEKVISAL 694 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + G+ LL Q+ ++ Sbjct: 695 QVPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQG-PAIYQFYLPQMN 753 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFL 539 + ++ + +R AL + + +L+ QP N E G++ +L G++ P +F+ Sbjct: 754 ERAVARLKIETQLRGALARREFVLHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFI 813 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFK 598 ++ L V++++ + + ++NL Q+++ I + Sbjct: 814 SVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETLR 873 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 +I P+ + E+TE AE + ++ L FG +I++DDFGTGY++ LKR D Sbjct: 874 ATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLD 933 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 ++KID F++D+ T+ DA I ++ LA + L VVAE VET+ Q L + G +QG Sbjct: 934 VLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQG 993 Query: 719 YLIGRPQPLA 728 Y +P PL Sbjct: 994 YYFSQPLPLE 1003 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 92/487 (18%), Positives = 187/487 (38%), Gaps = 33/487 (6%) Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPL 331 +N + Q + ++ V + + V + A D L Sbjct: 212 GGWNHSLNQADGSRLNVQHQAEVFYDENGAAKVVSGTVVDVTELTQAQDQILQLAHFDSL 271 Query: 332 TLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T L N A E+A + + L +DN + ++ G + ++ + R L Sbjct: 272 TGLANRNAFRKRVELAMERAKQYGHLGAVLFLDLDNFKRINDTLGHSIGDQLLQEVARRL 331 Query: 384 LPLMQENEKLY--------------QLPGSELLLVLSGPETEGRLQHMVNILNSRQ---I 426 +++ ++ + +L G E ++L +H + + I Sbjct: 332 TDIVRGSDSICGTNFNHAIDDNLISRLGGDEFTVLLPEIGKIKDAEHAARRVLNSIGDII 391 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + + + F + E + LL + ++ Sbjct: 392 NLSGHDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRAGKND-YELFVNSMNVVAK 450 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 +++ L + +R A+D +L + QP + G + +L + G+++P +F+P+ Sbjct: 451 RRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAE 510 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L + VL + + D + +VN+ ++++ + ++ + Sbjct: 511 ETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQSLDKLVSKVLLETGL 570 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + LEITE + E ++ + +L G +AIDDFGTGY++ LKR D +KI Sbjct: 571 PVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKLKI 630 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F+ + T DA + ++I +A L+V+AE VE Q L + + +QGY Sbjct: 631 DRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFS 690 Query: 723 RPQPLAD 729 RP +D Sbjct: 691 RPLIASD 697 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 100/431 (23%), Positives = 180/431 (41%), Gaps = 18/431 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSR 365 E +R A D +T LPN +ALE A + + + +D + ++ Sbjct: 424 EQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIFIDLDRFKNIND 483 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS----GPETEGRLQHMVNIL 421 G + + + L ++ + + +L G E ++VL ++ + L Sbjct: 484 SLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISAAHAVRKIQQTL 543 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 S+ + L++ + + ET+Q L+ + + + + + Sbjct: 544 -SQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRN-SYQFFTQEM 601 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + +++L + +RTAL++ +++L+ QP + E G + +L G + PD F Sbjct: 602 NLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVF 661 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ L L+S + LA R +VNL Q N+ + + Sbjct: 662 IPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADIL 721 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 ++ + LEITE A + +++ ++ L + G +AIDDFGTGY++ LK Sbjct: 722 AATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPV 781 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 + +KID FV+ I T++ DA I + LA VVAE VET+ Q L LQ Sbjct: 782 NRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQ 841 Query: 718 GYLIGRPQPLA 728 GY P A Sbjct: 842 GYFFSEPLSAA 852 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 101/459 (22%), Positives = 185/459 (40%), Gaps = 22/459 (4%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 IL + + + QA D LT LPN R L Sbjct: 342 ISILRRSDGGVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPNRRLLNDRLAHALAAN 401 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 E + L +D + ++ G + + R + ++E + + ++ G E ++ Sbjct: 402 KRNEDCGALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVV 461 Query: 404 VLSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 +L + H+ + S ++ N E+ + L+ Sbjct: 462 LLENLGADIKDATQAAAHIAEKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELI 521 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK- 514 Q Q+ A+ + + L + +R A+ + L L+ Q + Sbjct: 522 KQADMAMYQAKEAGRN-AVRFFDPQMQQSVETIAALESDLRHAVHERQLQLFYQIQLDHT 580 Query: 515 -EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKK 571 G + +L + G+++P +F+P + +L VL+ + +A + Sbjct: 581 HHPVGAEALLRWIHPVRGMVSPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTR 640 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VN+ Q + ++ + +++ I P + LE+TE A + + + L Sbjct: 641 DLVLAVNISARQFKQPDFVEQVGAMIRKHAIQPARLKLELTESIALEELDVIITKMHALR 700 Query: 632 K-FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G +++DDFGTGY++ LKRL D IKID FV+D+ ++ DA++V++I D+A Sbjct: 701 NGLGISLSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNF 760 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET Q LL + G QGYL GRP PL + Sbjct: 761 GIEVIAEGVETAGQFFLLKQYGCLLFQGYLFGRPVPLRE 799 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 102/472 (21%), Positives = 177/472 (37%), Gaps = 17/472 (3%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 +L++ + ++ + I +L V + R A D L Sbjct: 490 SVLDFETLGCERNGAVRQVSLSSRYIDIDGEKHVLTFVHDITDRKEAQARIEYLAHHDAL 549 Query: 332 TLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN A + + +D+ + ++ G + ++ + L Sbjct: 550 TGLPNRVLFRDRFALATAWAERAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRL 609 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 ++E + + +L G E L+ L+ + + +R L Sbjct: 610 RECLRETDTVSRLGGDEFLIALTDIRDPQAINSATAKIFDTLTRPFELEGHELTNTMSIG 669 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + E LL Q+ E ++ +Q+ L + +AL+ Sbjct: 670 IAIWPDDGEDFDTLLKNADTAMYQAKRAGRN-TWRFYTEQMNANAVEQLQLRTALHSALE 728 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + LL+ QP N G + +L ++ PD+F+P + L VL Sbjct: 729 NDEFLLHYQPQINLASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLR 788 Query: 558 SLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 +VNL + + ++ ++R + P + LE+TE Sbjct: 789 EACMQAVRWTRQGLPELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELELTESLL 848 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + ES + + +L G R++IDDFGTGY++ LKR D +KID FV+DI T+ D Sbjct: 849 LVDTESVIETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPDD 908 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A IVR+I +A L V+AE VE++ LH QGY RP P Sbjct: 909 AAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGD 960 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 98/448 (21%), Positives = 182/448 (40%), Gaps = 19/448 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGK 350 + + + + + R A DPLT LPN AL+ A + Sbjct: 498 VGHVTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRV 557 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G +R++ L ++E + L +L G E +++L E Sbjct: 558 AVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEA 617 Query: 411 EGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + L + N + + + + + L+ ++ Sbjct: 618 PADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAK 677 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 A E + T+++ L +R AL+ + ++Y QP+ + G + ++ Sbjct: 678 AQGRN-TYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALV 736 Query: 524 ARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMP 581 G +++P F+P+ + L VL + + + +VNL Sbjct: 737 RWK-PQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSA 795 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 +++++ + + + + LEITE E ++ +E+L + G +AIDD Sbjct: 796 EQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDD 855 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR D +KID FV+DI ++ D I +I +A+A ++V AE VE Sbjct: 856 FGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEG 915 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + Q LL LG QGYL P P + Sbjct: 916 EAQLELLRGLGCGSYQGYLCSPPLPADE 943 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 108/463 (23%), Positives = 188/463 (40%), Gaps = 23/463 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-- 345 E+ + + + + A D LT LPN R L Sbjct: 539 EWLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLPNRRLLHDRLRVA 598 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 E + + +DN + ++ G M ++ + + L ++E + + +L G Sbjct: 599 IASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGD 658 Query: 400 ELLLVLSGP--ETEGRL-------QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 E +++L E + ++ +LN R + F G Q Sbjct: 659 EFVVMLENLGERPEEAAGQSRIVGEKIIKLLN-RPYDLSGHDYHNTPSVGITLFGGQQVG 717 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + L+ + ++ A AL + + T + + +R A+ + L QP Sbjct: 718 IDELMKRADLAMYEAKASGRN-ALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLAYQP 776 Query: 511 IRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-- 566 + + G + +L G ++P +F+P+ + L L VLE+ A Sbjct: 777 QVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAA 836 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 ++ SVN+ Q N +++ + R P+ + LE+TE N + + Sbjct: 837 RPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAK 896 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L G ++DDFGTGY++ LK+L D +KID FV+D++T+ D +I R+I L Sbjct: 897 MSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIAL 956 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A+ LSV+AE VE+ +QQ L G QGYL RP LAD Sbjct: 957 ARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALAD 999 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 106/467 (22%), Positives = 202/467 (43%), Gaps = 40/467 (8%) Query: 300 SFSVCLLYMVRIYHRS-------EWLNRRWHL-------QALTDPLTLLPNFRALEQAP- 344 +L + R + N + QA +DPLT LPN R + Sbjct: 239 GRLTSVLAIGRDITELYESRAALKRANAQLENMNDLLQSQATSDPLTGLPNRRFMLDRLK 298 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + +DN + ++ G + ++ + L ++E + + +L Sbjct: 299 HALASSSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAHRLETCVREGDTVARLG 358 Query: 398 GSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 G E +++L E + + + + + + F+ +Q+ Sbjct: 359 GDEFVVMLEDLSEKDLEAAAQTEAVGEKILAALNQPYQLGKHEYRNTPSIGATLFNDHQQ 418 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 +L LL Q Q+ AL + + + L N +R AL+ L+ Q Sbjct: 419 SLDELLKQADIAMYQAKRAGRN-ALRFFDPQMQETINSRATLENELRKALELHQFYLFYQ 477 Query: 510 PIRN-------KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 + G + ++ + G+++P +F+PL + L L VL++ Sbjct: 478 VQVDSVQEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAEETGLIVPIGLWVLDTACAQ 537 Query: 563 LATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L T D +G +VN+ Q + ++ +R+ I P+ + LE+TE N Sbjct: 538 LKTWQHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGIDPKLLKLELTESLLLENI 597 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + ++ + L + G R ++DDFGTGY++ + LK+L D +KID F+ D+V+++ D IV Sbjct: 598 QDTIATMNALREIGIRFSLDDFGTGYSSLQYLKQLPLDQLKIDQSFICDLVSDSSDRAIV 657 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 R+I +A++ +L+V+AE VET+ Q+ +L + G + QGYL +P P+ Sbjct: 658 RTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHHQGYLFSKPVPI 704 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 108/471 (22%), Positives = 184/471 (39%), Gaps = 25/471 (5%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + ++ + + + H A DPLT +PN R Sbjct: 245 RKNGEIFPEWLTISGVRDGRGKVTHYVSTFSDISNLKVAESEIHHLAFYDPLTAMPNRRL 304 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + ID+ + ++ G + H + + R L ++E + Sbjct: 305 LLNRLDQACVSAKRSGQFGALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGD 364 Query: 392 KLYQLPGSELLLVLSGPETEGR-----LQHMVNIL---NSRQIHWNN-TGLDMGYGAAWG 442 + G E +++L +E + + + +R N T Sbjct: 365 TAARQGGDEFVVMLEELGSEQEGAAVQAEIVAEKIRLELARPYLLNGDTEYFRSASIGIS 424 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F G ++T+ LL Q ++ A+ + + ++ L +R AL + Sbjct: 425 LFFGQEKTIDILLKQADIALYKAKDAGRN-AIRFFDTAMQTTLDERAELEAGLRRALVRD 483 Query: 503 DLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 + +LY QP + G + +L ++ P+ F+PL + L + VL+ Sbjct: 484 EFVLYVQPQVDAVRRLIGAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQAC 543 Query: 561 KWLATHPCDKKG--PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 L D + SVN+ Q + ++ R+ +P+ + LE+TE Sbjct: 544 AELRRWADDPRSASLFLSVNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLD 603 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N E + ++ L G R ++DDFGTGYA+ LKR + +K+D F++DI N DA Sbjct: 604 NVEEVIEKMQALRTIGVRFSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAA 663 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I + LSVVAE VE Q A L K QGYL GRP D Sbjct: 664 IVRAIIAMGNTLRLSVVAEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDD 714 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 88/464 (18%), Positives = 180/464 (38%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + + + + + + + A DPLT LPN Sbjct: 792 RKSGEIFPKWLTIDAIRDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRAL 851 Query: 340 LEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 EQE S + +D ++++ G + + + ++ ++ Sbjct: 852 FRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSD 911 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L G E + + + + +G + Sbjct: 912 TVARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDG 971 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 E + L ++ ++ +++ L +R A++ L L+ Sbjct: 972 EDYETLTKHADTAMYRAKEEGRG-TYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHY 1030 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G+++P F+P+ + L V++ Sbjct: 1031 QPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKR 1090 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + + ++NL + ++ R ++ ++P+ + +EITE A + ++ Sbjct: 1091 LARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTI 1150 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 I +L G +++IDDFGTGY++ LK+L + +KID F++D+ ++ D IV SI Sbjct: 1151 EQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSIL 1210 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A A LSVVAE VE Q Q L + +QGY +P P Sbjct: 1211 SMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFE 1254 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 91/464 (19%), Positives = 177/464 (38%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + R + + D LT LPN Sbjct: 238 RKNGEIYPQWVNISAIRTGDGQTESYVGVFTDLTRIKESEENLLYLSGHDALTELPNRLL 297 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 Q + + + +D + ++ G + + + L + Sbjct: 298 FHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKA 357 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 L +L G E +VL + + ++ I + +G + + Sbjct: 358 TLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDG 417 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 E L+ + ++ + ++LL + +R A+D+ + LL+ Sbjct: 418 EKPSVLMRNAESAMYHAKQSGRN-NFQFYRSELNTASLARILLESGLRNAVDRQEFLLFY 476 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G+++P +F+PL + L L+ + Sbjct: 477 QPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKV 536 Query: 566 HPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R SVNL + + ++R + P + LE+TE A + E ++ Sbjct: 537 WMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETL 596 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L +FG +AIDDFGTG+++ LK+ D +KID FV++ + DA I+R+ Sbjct: 597 EKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFI 656 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +LA + +L V+AE VE +Q L + +QGY GRP Sbjct: 657 NLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGD 700 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 100/474 (21%), Positives = 188/474 (39%), Gaps = 18/474 (3%) Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + ++ G+ + L + LL + + + A D Sbjct: 223 VRVIEEDHVPRKDGGMAILRTKKIALLNAEGRAEYLLGVSEDIAERKRAEAQIARLAHYD 282 Query: 330 PLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 PLT LPN + + + + + +D + ++ G + ++ Sbjct: 283 PLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDRFKTVNDTLGHPLGDALLKIAAE 342 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 L ++E + + +L G E +V +G + + + + + +G Sbjct: 343 RLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATRLAARIVEAMAAPFDLQGHHVVIGAS 402 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + LL + ++ A A E + Q + L +R A Sbjct: 403 VGVSLAPTDGDDADELLKKADMALYRAKADGRG-AYHFFERAMDEQLQARRALELDLRRA 461 Query: 499 LDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L G+ L+ QP+ ++ G + +L + G+++P F+PL + L + V Sbjct: 462 LQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQLGEWV 521 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 L A P R +VNL P + + ++ + Q + LEITE Sbjct: 522 LRRACAEAANWPE---HVRLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESV 578 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 +++++M + L G RI++DDFGTGY++ L+ D IKID FV+DI+ ++ Sbjct: 579 LLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSD 638 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I++++ DL + + AE VETQ Q L + G +QGY I RP P ++ Sbjct: 639 AMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASE 692 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 112/498 (22%), Positives = 200/498 (40%), Gaps = 20/498 (4%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLL 306 F G + + + A+ C + + + +A + + Sbjct: 310 FLQGHDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPDPHGGEPRYFV 369 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRID 358 + + QA D LT L N L++ S + ID Sbjct: 370 GVQKDITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDID 429 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 N + ++ G IR + + L +++ + + +L G E +L+L+ + + +V Sbjct: 430 NFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVV 489 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + L + F + LL Q+ A Sbjct: 490 QRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSN-NFR 548 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 + ++ + ++ L N + AL+ L+L+ QP N + G + ++ G+ Sbjct: 549 FYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGM 608 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P +F+PL L + V+E+ R +VNL L QK++ Sbjct: 609 IPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVH 668 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I + + + PQ + LEITE N E S+ + ++ G ++++DDFGTGY++ Sbjct: 669 CIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSY 728 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL + +KID F+ DI T DA+I RSI LA + + V+AE VE+ Q A L + Sbjct: 729 LKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLEN 788 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGYL+ RP+P + Sbjct: 789 GCDEVQGYLLSRPRPFEE 806 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 98/465 (21%), Positives = 187/465 (40%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + +Y+ L + + + + + R + DPLT LPN R Sbjct: 507 RKNNEQYAEWVTLTAVNNEEGKVINYVGVFADISEIKHSQSRLNELVNRDPLTGLPNRRL 566 Query: 340 LEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + A ++ + + +D + ++ G M + + + + +++++ Sbjct: 567 MHELLDHAIKYAEREQNEIALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSD 626 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++++ + + + + L + + + Sbjct: 627 AVARLGGDEFIVMMDVLREREDAAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDS 686 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ Q +S ++ L N +R AL + +Y Sbjct: 687 LDVDGLIKAADIAMYQVKNKGKN-NHCFYSADLSQNAVERFTLENQLRRALARDQFEVYY 745 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + G + ++ + + G+++P KF+PL + L VL + Sbjct: 746 QAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKE 805 Query: 566 HPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 SVN+ + + + N A + + + LEITE N E + Sbjct: 806 WHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVI 865 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +++ G R+AIDDFGTGY++ LKRL D IKID FV+D+ N+ DA I +I Sbjct: 866 DVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAIN 925 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A++ +V+AE VET+QQ + L K+G Q QGYL RP ++ Sbjct: 926 AMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTASE 970 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 93/456 (20%), Positives = 192/456 (42%), Gaps = 16/456 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA---- 343 EY+ + + + + + ++ QA D LT LPN LE Sbjct: 335 EYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHA 394 Query: 344 ----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D + ++ G + ++ + L ++ ++ + +L G Sbjct: 395 IEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGD 454 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++VL+ ++ L + + + + + +G + + + L+ Sbjct: 455 EFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMK 514 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 ++ + ++ + ++ L +R AL +G+ L+ QP + Sbjct: 515 DADTAMYRAKQKGRN-TFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQT 573 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 G + ++ + G ++P F+P+ + NL + VLE + +A G Sbjct: 574 GRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTG 633 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 + +VN+ L + I L +Y + P + +E+TE + + ++ + +L + Sbjct: 634 IKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLRE 693 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++++DDFGTGY++ LKRL IK+D FV+D+ + +A IV +I LA A + Sbjct: 694 IGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDM 753 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 S+VAE VET+ ++ L G +QG+ +P P Sbjct: 754 SIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPAD 789 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 89/464 (19%), Positives = 173/464 (37%), Gaps = 18/464 (3%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + ++ + + + + + + + D LT LPN Sbjct: 488 HRDGHIFPAWQSVSAVKGPDGSTTHYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAY 547 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + L +D + ++ G + + + + + + Sbjct: 548 FQARLDQLIEAAARDRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGD 607 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + + G E +++L+ + + ++ ++ L + + + Sbjct: 608 FVARQGGDEFVVILADSDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAG 667 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L+ + + +S T+++ L N + AL G+ LY Q Sbjct: 668 DSESLIKSADAAMYHAKSLGRN-TYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQ 726 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P ++ G + ++ + G + P +F+PL + + R VLE + Sbjct: 727 PQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREW 786 Query: 567 PCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +VNL PL L + + ++ L ++P + LE+TE + Sbjct: 787 QAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSD 846 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L + G R +IDDFGTGY++ L R D +KID F++D+ A I R+I Sbjct: 847 MLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIA 906 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LAK L VVAE VET +Q L + G QG+ RP P + Sbjct: 907 LAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADE 950 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 106/477 (22%), Positives = 197/477 (41%), Gaps = 27/477 (5%) Query: 275 LNYNQNFL--QGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + + + + +++ + L ++++ + + + A DP Sbjct: 320 GRHEEELMLHRRDGSQFWAHLRVRQLDPAQPQAGCIWVIEDISARKAVEDEVNRLAFYDP 379 Query: 331 LTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN R L + + +DN + ++ G ++ + + Sbjct: 380 LTQLPNRRLLRDRLAQALAASARSGMHGALIFIDLDNFKSLNDTLGHARGDQLLKLVGQR 439 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGP---------ETEGRLQHMVNILNSRQIHWNNTGL 433 L ++E++ + +L G E ++++ + EG + +++ LN + + Sbjct: 440 LTHCVRESDTVARLGGDEFVVIVQDLGARLDECATQAEGVGEKILDALN-QPYPLDGHVR 498 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 F +++++ LL + Q+ L + + ++ L Sbjct: 499 HSTPSIGITLFADDRDSVDDLLKEADMAMYQAKTAGRN-TLRFFDADMQAMLVQRAALEE 557 Query: 494 TIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R ++ LL+ QP + G + +L G++ P +F+PL NL Sbjct: 558 DMRESMRLSHFLLHYQPQVVGSGRITGAEVLLRWPHPLRGLVPPAEFIPLAEDTNLITAL 617 Query: 552 DLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VLE+ K LA D K SVN+ Q + ++ + +R P + L Sbjct: 618 GHWVLETACKTLADWSAQDDMKHLSVSVNVSARQFRQPHFVAEVMSILERTGADPHLLKL 677 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE + E + + L G ++DDFGTGY++ LKRL D +KID FV+D Sbjct: 678 ELTESLLVEDVEDIVAKMSALKSRGVGFSLDDFGTGYSSLAHLKRLPLDQLKIDQSFVRD 737 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 I+T+ D I R + LA + L+V+AE VE Q+ LL ++G QGYL RP P Sbjct: 738 ILTDPNDLAIGRMVVALADSLGLTVIAEGVELAAQRELLAQIGCDAYQGYLFSRPLP 794 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 109/597 (18%), Positives = 211/597 (35%), Gaps = 26/597 (4%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 D ++ +V +LF Y +T + Q L+ + G Sbjct: 535 RQDGSELWAIVSTNALFNPEGDYMGTLGLITDITKRKRTEQALYDSEKR-LEGILNSLQD 593 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 + W A L P + F ++ + L Sbjct: 594 VIWSADPKTRQSLYLNPAIQLVYGRPMEDFFRDPHLWLCMVHPEDQELVSHHLKLLEDKG 653 Query: 277 YNQ---NFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + ++ L ++ S+ + + + + A D Sbjct: 654 STEVHYRIIRPDGETRWLHSRSRLVYDEQGKSLRIDGINSDITERKQAEEQLQYNATHDT 713 Query: 331 LTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN E + L +D + ++ G + +R I R Sbjct: 714 LTQLPNRLLFMDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIAR 773 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 L ++ ++ L +L G E ++L + + +R + + Sbjct: 774 RLQKSLRADDTLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNTS 833 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 +G E +L ++ A ++ + ++ L +R A Sbjct: 834 IGIALSNGEYEAASEILRDADTAMYRAKA-GGKACYAIFDQQMHASAVSRLQLETDLRRA 892 Query: 499 LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ + L+Y QPI + + G++ ++ G++ P +F+P+ + L + Sbjct: 893 IERQEFLVYYQPIISLQHDTLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEWI 952 Query: 556 LESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 LE + L + + SVNL L ++ G I R+ + I A+ +EIT Sbjct: 953 LEQAAQQLKIWQTQYRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEIT 1012 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E N + + + L + I +DDFGTGY++ L R + +KID FV + Sbjct: 1013 ESILMENVQVAADVLIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMRP 1072 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 N ++ IVR+I LA + ++AE +ET+ Q A L +G + QGY +P ++ Sbjct: 1073 NDENSEIVRAIVSLAHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSE 1129 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 87/445 (19%), Positives = 181/445 (40%), Gaps = 17/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKS 351 + + + +R A D LT LPN L+QA + Sbjct: 779 GTVTNYIALFTDISAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVA 838 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D+ + ++ G + + + L +++ + + +L G E +++L+ E Sbjct: 839 VIFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDS 898 Query: 412 GRLQHMVNI----LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 +++ ++ L + L F + LL ++ Sbjct: 899 HQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKE 958 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILA 524 E ++ + +++ + ++R +++ +LLL+ QP + G + +L Sbjct: 959 VGRN-NYHFYTEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLR 1017 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLT 583 D G+++P +F+P+ + L QV+ + + L+ S+N+ + Sbjct: 1018 WQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQ 1077 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + +++L + +SP + LE+TE +A ++ +E L GF +IDDFG Sbjct: 1078 FRDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFG 1137 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L R D +KID F++ ++ D I+++I L + V+AE VE + Sbjct: 1138 TGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKED 1197 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 + L G +QGY + RP Sbjct: 1198 EYRALRAAGCDGIQGYFVARPLTPE 1222 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 118/756 (15%), Positives = 254/756 (33%), Gaps = 57/756 (7%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIF--LAWMPLC---VMLSILFIFG---------WRGVV 65 + L+ +S A++ F L + ++ +++++ G W Sbjct: 81 IAAALLAMSGLDGLHAMMPDGESFVWLHSLATAFGGLLFAMIWLPGHWFKPVMRHWPLNA 140 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR- 124 ++ Q V+ + L + LT R+ + Sbjct: 141 FLMAAAMGIYSILQPGQIPQMLASGQFTQAAVIMNIGGGLFLLLAAVKLFLTYRHSAKSE 200 Query: 125 ----LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 F ++ I + + + G ++ VV + + Sbjct: 201 DLLFFFQCLILASAAITFMQSSIWDMPWWGWHMQRLAGYTLTLWLVVKTAKTIEGKTLLS 260 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS----WLAALSVLLLLLCTPYEN 236 L + I A+ R E T + + + +P + Sbjct: 261 NRL--LKQQIEDRKQAENQLRIAATAFETHEAIMITDAHANIIRVNQAFQNITGYSPEDV 318 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 ++ + + +W + Y + Sbjct: 319 IGKNPRVLSSGRQGSEFYAAMWKRLLGSGSWTGEIWDK--------RKNGEVYPKWLTIT 370 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + + + + A D LT LPN R L Sbjct: 371 AVKDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISAR 430 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ G + + R + +++ + + ++ G E ++++ Sbjct: 431 SNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLI 490 Query: 406 SGPETEGR-----LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 T+ + + + + + + GN+E++ LL Sbjct: 491 EEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRH 550 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKE 515 Q+ + + + + L +R A+ L LY Q + Sbjct: 551 ADLAMYQAKESGRN-GVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQLTSDHR 609 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGP 573 G + ++ + G+++P +F+P+ + +L VLE+ K L + Sbjct: 610 PLGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNL 669 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 ++N+ + + + L + ++P + LE+TE S+ + + L Sbjct: 670 ILAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKAL 729 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++A+DDFGTGY++ LK+L D IKID FV D+ T+ DA++V++I +LA ++ Sbjct: 730 GVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMN 789 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET+ Q L + G QG+L G+P P+ + Sbjct: 790 VIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDE 825 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 108/483 (22%), Positives = 208/483 (43%), Gaps = 22/483 (4%) Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAF-ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 VS + L+ + + + I+ V ++ V + +VR + H A Sbjct: 613 GVSEITGRIRELEALRKDGSMFPIELGIVEVQMAGEVNFIGVVRDITERKQRENEIHQLA 672 Query: 327 LTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 DPLTLLPN R L + L +DN + ++ G + Sbjct: 673 FYDPLTLLPNRRLLLDRLTEAINHSVRTRNFSALFFLDLDNFKNLNDSAGHNKGDLLLGQ 732 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GRLQHMVNILNS---RQIHWNN 430 + L+ +++ + + +L G E +++ S E + + + + S R+ + + Sbjct: 733 VAERLVNSVRQGDTVARLGGDEFVIIASDLSHEPTLAANQAERLAQKIVSNLTREYNLDG 792 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + F+ + LL Q ++ + + + + + Sbjct: 793 LTYNSSASIGVTLFNSENLPKEDLLKQADMAMYKAKYAGRN-GVQFFDPQMQVSVSSRAS 851 Query: 491 LLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +++ + +A+ +L+ Q N + G + +L + + G+++P +F+PL + L Sbjct: 852 IVSDLYSAIQSQQFVLFYQKQVNHLKQCIGVEVLLRWIHPEKGMVSPLQFIPLAEETGLI 911 Query: 549 ARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VLE LA +K+ +VN+ + + N ++ K +PQ Sbjct: 912 VPIGEWVLEEACATLAKWSLESEKQHLSIAVNISVVQFSKDNFVQTVLNALKTSGANPQL 971 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE +N +++L + G +IDDFGTGY++ LK+L + +KID F Sbjct: 972 LKLEITETLLANNIPDVKAKMKELQQHGVTFSIDDFGTGYSSLSYLKQLPINQLKIDQGF 1031 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V+DI+ ++ D I +++ LA + L V+AE VET+ Q+ALL +G QGYL G+P Sbjct: 1032 VRDIINSSNDRAIAQAVITLADSIELQVIAEGVETEAQRALLQSMGCHTYQGYLYGKPCR 1091 Query: 727 LAD 729 + + Sbjct: 1092 IEE 1094 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 104/558 (18%), Positives = 206/558 (36%), Gaps = 31/558 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---------CTPYENDFIAGYLVPVFF 248 ++ A L E++ LA + + + L + A L+ + F Sbjct: 822 TKRKQAEAALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDALGYTAQELLALTF 881 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCL 305 + + + + + L L + + + ++ + Sbjct: 882 TEISHPTERALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAILKVVLVRDAQGQPLHY 941 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---------FCCLR 356 + V + + + A D LT LPN E ++ L Sbjct: 942 ISQVVDISDRKRMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAGQRWDYLCAVIVLD 1001 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G ++ + +I L ++ ++ L +L G E ++L Sbjct: 1002 LDRFKVINDSLGHLVGDRLLSAIAERLQGCLRPSDTLARLGGDEFTILLDDIPNTAAATD 1061 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + ++ + + + + LL ++ Sbjct: 1062 IAKSIHQTLESSFNLDGYEVFATASIGIALSGMGYHRAEDLLRDADTAMHRAKLQGTA-C 1120 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + +SG+ Q+ L +R A+++ +L +Y QPI + + G++ ++ + Sbjct: 1121 YVMFDTAMSGRALAQLRLETELRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQ 1180 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQK 587 G+++P F+PL + L VL + L SVNL Q Sbjct: 1181 GMISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQT 1240 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ +I ++ + ++P + LEITE +++S+ +E+L ++ IDDFGTGY+ Sbjct: 1241 NLIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYS 1300 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + RL + D +KID FV + + IV++I LA + VVAE +ET Q A Sbjct: 1301 SLSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQ 1360 Query: 708 LHKLGVQYLQGYLIGRPQ 725 L +Y QGY +P Sbjct: 1361 LRGRRCEYGQGYFFSKPL 1378 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 121/600 (20%), Positives = 233/600 (38%), Gaps = 37/600 (6%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 +++ + L F+ L LF L ++ A + + + K Sbjct: 333 ESLRALQSLGHQFSVALGRARLFDSLESLVEQRTSALKAEMAEKERAQEQLKLRNRAVDA 392 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL-RYPFLNLTWAVSTLCLLNYNQ 279 + ++++ P Y P F I + + FL L ++ + + Sbjct: 393 SVNAIIIADKSEPDNPIV---YANPAFERISGYNLEDVTGRNFLFLLGNETSQLGVANIK 449 Query: 280 NFLQGVETEYSLA----------------FILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 L+ Y+L + + ++ S + Sbjct: 450 RALKSNTEGYALLKNYRKDGTLFWSELKVAPVTDAKGDVTHFVAILNDVTESIQYQAQLE 509 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 + D LT LPN L + G + +DN ++++ G Sbjct: 510 YKTKYDNLTGLPNRNLLNDRIQQAIAYAARRNKGFALAVFDLDNFKYINDSMGHETGDQL 569 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTG 432 + + +L ++E + L +L G E ++++ E + L M+N + S+ + Sbjct: 570 LTEVAESLRSCLREGDTLARLGGDEFVILMHKEECDRPLGLMLNRIQQLVSQPRRLKDKE 629 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + +F + E LL ++ + S + ++ K+V + Sbjct: 630 ILVTPSIGVCQFPEDGEDASTLLKNADTAMYKAKERGRNR-ICSYTQEMNESIQKRVQME 688 Query: 493 NTIRTALDQGDLLLYAQPIRNKEGEGY---DEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R ++ G+L LY QP + G G + ++ K D ++ P +F+P+ + L Sbjct: 689 QDLRRGIENGELELYYQPQLDPHGGGAVGLEALVRWRKGDR-MVPPLEFIPIAEETGLIT 747 Query: 550 RFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 D VL + L K+ SVNL P + ++ + +I P + Sbjct: 748 EVDAWVLRAACLQLKMWRDQKQQMVPVSVNLSPRQFQDAYCVELVRKVLQESNIEPGCLK 807 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 +E+TE NAE ++ + QL G ++++DDFGTGY++ LK D +KID FV+ Sbjct: 808 IEVTESMVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVR 867 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + +A I+R+I L K + +VAE VET +Q + L + G +QGY P P+A Sbjct: 868 NVTNDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVA 927 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 110/592 (18%), Positives = 208/592 (35%), Gaps = 30/592 (5%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 + + LL+L L+ Y R+ P E++ ++ Sbjct: 131 SLQPVLIKTLLALIGGALVGA---YAFFRLRTVP---LRALDEAYRVLKQSEEKYRSVYE 184 Query: 220 LAALSVLLLLLCTPYEN--DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 + L + D + + P +F + L + C Sbjct: 185 SLNEGLALYRASRREDGSADLVLTDVNPAAINVFGFSRDDIGGWITELLDGLFAECAEQV 244 Query: 278 NQNFLQGVETEYSLA-------FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 E L F L + ++ + + A D Sbjct: 245 FGALQARGEVSLDLEQNSTGRIFSLTAFPMGYGMVATLLEDVTEKKRTAEQLERLAYYDS 304 Query: 331 LTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT L N R L EQ + + ++ + ++ G + + + Sbjct: 305 LTGLLNRRMLLDRMEQAIGTAQREGVKVATLFMDLNGFKVINDTLGHKAGDQILVEVAKR 364 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ--IHWNNTGLDMGYGAA 440 L ++++ + L +L G E ++ + + E N++N+ + + +G Sbjct: 365 LQKMVRKRDTLARLGGDEFVVAATFEKDENASAIAKNLINAITPVYQVCDREVYVGVSVG 424 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F + + + LL + + ++ + +++ L +R A++ Sbjct: 425 ISIFPDDGDVPETLLKNADIAMYNAKSQGQG-GFCFYSAQLNERLHERMQLEFKLRGAVE 483 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + + L QPI + + +L + G + PD F+PL + VL Sbjct: 484 REEFFLEYQPILDSKTGRITAVEALLRWNDPEKGRVMPDSFIPLAEDTGVILPLGEWVLR 543 Query: 558 SLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + L R +VN+ Q +++ + + + P + LE+TE Sbjct: 544 TACAKLRQWQDAGVMPVRMAVNISGRQFTQGDLSKTVEDALLQSGVHPSWLELELTETCL 603 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N E ++ + +L I+IDDFGTGY++ + LK D +KID F+ ++ D Sbjct: 604 IKNVEETVRKLCRLKGLCVSISIDDFGTGYSSLQYLKNFPIDHLKIDRGFINNVCELPDD 663 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV +I +AKA L V+AE VET+QQ L + G QGY RP P Sbjct: 664 RAIVDAIIGIAKAMDLHVIAEGVETRQQAEHLMRRGCDEFQGYYFYRPLPEE 715 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 123/644 (19%), Positives = 237/644 (36%), Gaps = 30/644 (4%) Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL--S 171 + R F + L+ +G + + + ++ G D L Sbjct: 59 DNPEPQEQKNRNFRVTLIILLGKYLWIAGILASVVMSEAVTAAMGLLFKGEVTYDYLATG 118 Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + A+ + ++ + +M Q ++ E+R TL +A+ ++L+ Sbjct: 119 MVAALFVSAIMVTAIMKMEELERRRQEEVAKN-RALRASERRYRTLIEVASDAILVTDSE 177 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYP----------FLNLTWAVSTLCLLNYNQNF 281 T D + + L +L + + Sbjct: 178 TGTLVDCNRQAETLLGMSRNEIIGRHLCNLQQTGNDADGAETDLLGHMLRGKTGTIELSL 237 Query: 282 LQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--- 337 ++ T + + + R + R A DPLT LPN Sbjct: 238 VRADGTTVPVEVSSSTFEMDGRRYVHGAFRDITQRREAEDRIKHLAHHDPLTNLPNRVFL 297 Query: 338 -----RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 +A+E A ++ + + +DN + ++ G + + + L + ++ Sbjct: 298 HGRLEQAIELARREQNQVAVMFIDLDNFKRINDTLGHRIGDALLEQVAARLTENVPGSQV 357 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++V++G M + R + L G + + Sbjct: 358 VGRLGGDEFIVVITGNRVSTTSAAMAERILESLCRPYTVEDYQLHSGASIGIAIYPADGN 417 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + + L+ + + + + ++ +++ + N +R AL G L+ Q Sbjct: 418 SAETLMKHADAAMYHAKSRGRN-TFEFFSQAINRGVRERLDIENGLRDALKHGGFKLHYQ 476 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + +L G++ PD+F+P+ + L L V++ L Sbjct: 477 PQIDLTTGSICSVEALLRWRHPLLGVIAPDRFIPIAEETKLILPLGLWVIDRACHQLRAW 536 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 D G R +VN+ L ++ + + +R+ +S + LEITE N Sbjct: 537 RNDGIAGVRMAVNVSVKQLQDESFFEALGSIVERHGLSGSDIELEITESAIMENLSRVQA 596 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ L +G ++IDDFGTGY++ RLK L +KID FV DI T+ +A I I Sbjct: 597 LLKSLQDYGITLSIDDFGTGYSSLGRLKLLPIQSLKIDRSFVHDIETDHGNAKICDGIIA 656 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L + L ++AE VET Q+ LL G +QG+LI +P P D Sbjct: 657 LGHSLGLKIIAEGVETDAQKNLLQNSGCDAIQGFLIAKPLPADD 700 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 90/433 (20%), Positives = 177/433 (40%), Gaps = 16/433 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEF 362 + H QA D LT LPN + +E + + +D + Sbjct: 241 DITDRKMAENSLHYQAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKN 300 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI-- 420 ++ G + + S + L ++ ++ L + G E +++ + E ++ Sbjct: 301 INDTLGHTLGDELLGSFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVF 360 Query: 421 -LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + N L + + + + + ++ ++ Sbjct: 361 SILQQPFQVGNHLLYLKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNH-YQIYHP 419 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 +++ +T++++ + N + AL++ LL+ QP N + G + ++ G+++P Sbjct: 420 LITSKTSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPA 479 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 KF+P+ + L VL + R +VNL Q N + + Sbjct: 480 KFIPIAEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTK 539 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + ++ PQ + LEITE N E S + L G I++DDFGTGY++ LK++ Sbjct: 540 ILAETNLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQI 599 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + IKID F+KD+ D I+ ++ + + ++ V+AE VETQ Q LL KL + Sbjct: 600 PFNTIKIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEE 659 Query: 716 LQGYLIGRPQPLA 728 +QG+ +P Sbjct: 660 MQGFKFSKPLKPE 672 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 115/553 (20%), Positives = 207/553 (37%), Gaps = 26/553 (4%) Query: 200 WRRDIAPSLGKEKRAFTL---SWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF--- 248 W R I ++ R ++ +L+ ++ + GY V Sbjct: 290 WLRTIQQLRRRDARMRLATSVFASSSEGILIANPNDEVIGINPAVTALTGYSVQELLGRP 349 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCL 305 + F + ++++S + + +A + + C Sbjct: 350 VSFLAPEQTVAESRRQASFSISEKGVWQGEALIKHKQGYTFPVALTITTVTGEDGRVECY 409 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL----EQAPEQEAGKSFCCLRIDNLE 361 + + R H A TD LT LPN +L E+ L +DN + Sbjct: 410 INTFSDISERKANEARIHDLAHTDTLTGLPNRMSLYSGLEERLANVQPIGVMILDLDNFK 469 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + + R L+ + E + +L G E ++VL P+ + + + Sbjct: 470 IINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEFVIVLDCPQATQIVGRVAKEV 529 Query: 422 N---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 ++ L G + LL + + + Sbjct: 530 LQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDTAMYAAKSSGKN-NFKFFT 588 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 E + Q +++ + N +R A+ + + L+ QP + G + ++ + G++ P Sbjct: 589 EKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHP 648 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRII 594 +KF+ + + NL VL + ++ SVN+ L + + I Sbjct: 649 EKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLID 708 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 L + I P + LEITE + E ++ +++L G +AIDDFGTGY++ LK Sbjct: 709 NLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKL 768 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L +KID FVKDI T+ DA I + LA+ L +VAE VET+ Q L G Sbjct: 769 LPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCD 828 Query: 715 YLQGYLIGRPQPL 727 QGY +P P Sbjct: 829 SAQGYYFSKPLPA 841 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 106/465 (22%), Positives = 195/465 (41%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + Y ++ L + + + + R A DPLT LPN Sbjct: 317 RKGGQWYPAELSISALRDEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPLTRLPNRSR 376 Query: 338 --RALEQAPEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 +L++A + + + + +D + ++ +G + + I L ++ E Sbjct: 377 LTASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERG 436 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 L +L G E L++SG ++ +L M + + + + + + + F + Sbjct: 437 MLARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDG 496 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + LL ++ + ++ QT +++LL N +R AL++ + L+ Sbjct: 497 RDARTLLKNADVAMYRAKEAGKN-TYQFFDIGMNTQTFERLLLENGLRMALERHEFELHY 555 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L G++ P +F+ L + L VL + LA Sbjct: 556 QPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAA 615 Query: 566 HPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 PR +VNL P Q ++ ++ + ++ + LEITE + ++ Sbjct: 616 WDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAV 675 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G ++IDDFGTGY++ LKR D +KID FV+ + + +A I +I Sbjct: 676 SLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAIL 735 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AK VVAE VE+++Q A L G LQGY GRP P + Sbjct: 736 AMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGE 780 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 100/553 (18%), Positives = 204/553 (36%), Gaps = 29/553 (5%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 E+R + + + Y + + Sbjct: 154 EQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQSLNNIAQQ 213 Query: 261 PFLNLTWAVSTLCLLNYNQNFL-------QGVETEYSLAFILAVLISFSVCLL---YMVR 310 ++ + L L+ + + + ++ + + + LL V Sbjct: 214 LYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGKLLYFEGTVE 273 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + N QA D LT LPN ++ + + + +D + Sbjct: 274 DITERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQAISYADRTASKLAVVFVDLDKFKD 333 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + ++ R L +++++ + + G E +L+LS L + + Sbjct: 334 INDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVLLLSNIHGMDALSQTLQRVL 393 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S + + + +T + LL ++ Sbjct: 394 ALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAMYKAKQEGKN-NFQFYTR 452 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 ++ +++ + +R AL + L+ QP N G + ++ G+++P+ Sbjct: 453 ELNSILVERLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEALIRWHNPRQGLISPN 512 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ + +L + VLE +A SVN+ P Q N+ G I R Sbjct: 513 RFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVSPRQFQQSNLVGNISR 572 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + P + LEITE + + + L G ++AIDDFGTGY++ LK Sbjct: 573 VLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAIDDFGTGYSSLGYLKHF 632 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV + ++T + I+++I L +++VAE VET++Q+ L +G Sbjct: 633 PIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVETERQRDFLLSIGCDE 692 Query: 716 LQGYLIGRPQPLA 728 +QG+L +P P Sbjct: 693 MQGFLFSQPLPFD 705 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 102/462 (22%), Positives = 184/462 (39%), Gaps = 22/462 (4%) Query: 289 YSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA---- 343 L F+L L + + + H A DPLT L N + L Sbjct: 119 VPLEFVLQYLSFGEDDYFVILGKDISERRHAESTIHTLAFFDPLTHLANRQLLHDRMAQA 178 Query: 344 ----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +DN + ++ G + + + + + +++E + L ++ G Sbjct: 179 LAKSQRHHKVGALLMIDLDNFKALNDTKGHHIGDELLIQVAQRIQTIVREGDTLARISGD 238 Query: 400 ELLLVLSGPETEG-----RLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L G E + L + F+G ++ Sbjct: 239 EFVVLLEGLAHEESKAAQEAEKFATRVKYLLNEPYELLGYEHTCSSSIGIALFNGQPKSK 298 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL Q Q+ + + ++ + + + +R AL + +L+L+ QP Sbjct: 299 ETLLKQADIAMYQAKEKGRNR-ICFYDPLMQENIEHKTTMEHELRMALSKEELILFYQPQ 357 Query: 512 RN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N + G + +L G++ P+ F+PL + L VL + L+ D Sbjct: 358 VNLEGKIVGVEALLRWNHPQKGLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKD 417 Query: 570 KK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 S+N+ + + + ++ LE+TE + ++ I Sbjct: 418 FPHQPLHLSINVSAKQFQEASFYETVANAIALSGSDAGSIKLELTESLILDSIHETIAKI 477 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 E L G ++DDFGTGY++ LKRL D +KID FV+DI + DAMIV++I ++A Sbjct: 478 EALRLLGVGFSLDDFGTGYSSLSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMA 537 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VE ++Q L + G QGYL G+P P + Sbjct: 538 HNFDLDVIAEGVEDKEQFNFLMENGCGLFQGYLFGKPMPPEE 579 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 99/465 (21%), Positives = 186/465 (40%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + ++VL + + + R A D LT LPN Sbjct: 154 RKSGEHFPCWVNISVLQDGQGEISHFVALFTDISERKEQEARVQHMAEYDALTDLPNRVL 213 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + Q + + +D+ + ++ G ++ + R L ++ + Sbjct: 214 VNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLD 273 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +L+L G + + + L +G + Sbjct: 274 TVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDG 333 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 +Q LL + AH ++ Q +++L+ N +R A++Q L L Sbjct: 334 SDIQTLLMNADLAMYHAKAHGRN-TFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVY 392 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L D G++ P +F+P+ L VL+ + + Sbjct: 393 QPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASL 452 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + R +VN+ L++ + + +R+ + + LE+TE ++A+ + Sbjct: 453 WLRAGLEPMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLAS 512 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + + G R+AIDDFGTGY++ LKR D++KID F+ D+ + +A IV +I Sbjct: 513 RQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIV 572 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA A + +AE VE + QQ L LG + +QGYL+G P + Sbjct: 573 HLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPL-AEE 616 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 139/733 (18%), Positives = 249/733 (33%), Gaps = 62/733 (8%) Query: 55 ILFIFGWRGVVPVLCGMFCTNLWNFHL-SFLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 +L F P+L G +LW + + + + + Sbjct: 112 MLLHFD-AAHPPLLAGSADISLWLSSWARVAEVITLWFTAMRLSAPGLGRTWLAVACAIT 170 Query: 114 YGLTSRYVWQRLFWLGLVTP---------------IGIKCSMYLVGSFFDFPLKISTFFG 158 + + W V I + D P + + Sbjct: 171 LAIVGLSLGPLPGWFAQVAGSALHQPLALALALALIVAATVLQRSARRNDQPRERILAWA 230 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW----RRDIAPSLGKEKRA 214 + + +L + + L + R+I Q ++ RR A E R Sbjct: 231 TMAFACGEITVGALGVHGSVASPL-AHGLRVIAYALLYQAVFDAGIRRPFARIQEAESRL 289 Query: 215 FTL-SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF----TLGVGKLRYPFLNLTWA- 268 S LA + + + + D + + PVF VG+ + A Sbjct: 290 RESESRLARVVSAMPDMVFLKDADGVYLSVNPVFERFIGRPEHQIVGRNDFDLTTPAQAR 349 Query: 269 ----------VSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRS 315 + L+ + I + +L + R Sbjct: 350 QFRQNDQRAMQTRQPLVYEETLTFAEDGYQGRFETIKTPIRDLHGRVTGVLGVCRDITER 409 Query: 316 EWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHY 367 + + A D LT LPN R + + + +DN + ++ Sbjct: 410 KRAAQEIERLAFYDALTGLPNRRLLLDRLQRSIATCQRTHKLGALLFIDLDNFKDLNDTL 469 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN 422 G M + + L+ ++ + + + G E +++L + + + + L Sbjct: 470 GHDMGDQLLAQVATRLVASVRAADTVARFGGDEFVVMLEALAPDLRTATAQAEMVADKLL 529 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + F + ++ LL + Q+ A + Sbjct: 530 ASLNQPFALDGGQHYSTLSIGVTLFGEQRLSVDELLKRADLALYQAKAAGRNTQ-RFFDP 588 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDK 537 + + L +R L + +LL+Y QP+ + G + ++ G++ P Sbjct: 589 DMQAAVNARSNLEADLRQGLARAELLVYYQPVVDHQARLMGAEALVRWRHPQRGMIGPAD 648 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+PL Q L VL++ L G SVN+ Q +++ Sbjct: 649 FIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQFRQPGFVAQVLH 708 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 K + P+ + LE+TE + E ++ + QL G A+DDFGTGY++ LKRL Sbjct: 709 QLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSLSYLKRL 768 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IKID FV++++ + DA IVR+I LAK+ L VVAE VET Q + L G + Sbjct: 769 PLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQLHGCEG 828 Query: 716 LQGYLIGRPQPLA 728 QGYL GRP P+ Sbjct: 829 FQGYLFGRPVPME 841 >UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488U0_COLP3 Length = 788 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 135/720 (18%), Positives = 253/720 (35%), Gaps = 63/720 (8%) Query: 51 VMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGT 110 V++S+ +F G+VP L H+ V C Sbjct: 74 VLISLCGLF--FGLVPTLIAGAMMVSLRLHIGGAGILVGSLCVIIPGSIGCL-------- 123 Query: 111 RWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL 170 + + + +L W L G+ + ++G P + A + Sbjct: 124 ---FAIILKRKNLKLDWFKL-YSFGMLIQITVLGCMLLMPEHLRYKVIGAV-------IQ 172 Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--- 227 + + ML + R ++ ++ L + Sbjct: 173 PVIVVFPVCTMLVGLILRRQRDRRKSEYDLTESQKLLNREQSLMRGLIGSLPDLISFKDV 232 Query: 228 ---LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN---F 281 L C F+ + + G + + + Sbjct: 233 QGRYLGCNHAFEQFVGLTEQELKGKMDQELKGNFKPSDIAGLDEQEIIASGKVYSQDEWV 292 Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + ++ I F L+ + R + + A D LT LPN R Sbjct: 293 VYPDGSKVLHETIKKTFDGFDGTRYGLMSVSRDITERKNHEDQIQRLAFYDSLTQLPNRR 352 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L+ E + + +D+ + ++ G M + ++ + +++ Sbjct: 353 MLQDRLQLLVTTSARDERFNALFFIDLDHFKTLNDTQGHNMGDQLLIAVAARIQDSVRDE 412 Query: 391 EKLYQLPGSELLLVLSGP-ETEGRLQHMVNILNS-------RQIHW---------NNTGL 433 + + +L G E + ++S E E H+ + + N Sbjct: 413 DIVARLGGDEFVALISNLGEDEATAGHVAEKVAEKIRLSICQPYKLSIKENVDANNEMIF 472 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 F N + +L Q Q+ A A+ + + + +L Sbjct: 473 HCTPSIGISLFKSNLTSPDEILKQADVAMYQAKAAGRN-AIRFFDPAMQIALEENAAMLA 531 Query: 494 TIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 + A+D G+L L+ Q ++ +G + +L G+++P F+P+ + L Sbjct: 532 ELHQAIDNGELELFYQIQIDETKGIQGAEVLLRWFHPIRGMVSPLDFIPMAEESGLIIPI 591 Query: 552 DLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VLES L +++ + SVN+ L Q+N + + +I+P + L Sbjct: 592 GRWVLESACHQLKVWENIPNRENWQISVNVSALQFQQENFVEIVQEIILSNNINPHGLKL 651 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE N + + + QL++ G ++DDFGTGY++ LKRL +KID FV+D Sbjct: 652 ELTESMVLDNVDIIIEKMHQLNQLGIDFSMDDFGTGYSSLSCLKRLPLKQLKIDQSFVRD 711 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I T+ DA IV++I +L+ + V+AE VETQ+Q+ L G QGYL RP P+A+ Sbjct: 712 ITTDPDDAAIVQTIINLSNSLKYDVIAEGVETQEQRQFLFNNGCSQYQGYLFSRPVPIAE 771 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 113/578 (19%), Positives = 204/578 (35%), Gaps = 37/578 (6%) Query: 187 TRMIVSPHFAQIL--WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY-- 242 R+ ++ R A ++ A SW + ++ L P Sbjct: 119 YRVNYIFRSSRAFRDLRTSEARLSKAQQLARMGSWEWNPLLDVVQLSEPCRQIMGIDSAT 178 Query: 243 ----LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + LG LR L L L + + L Sbjct: 179 QVRDIASLIALAHPLGRPYLRKGLDALMERGRPLSLDCQTATADEEDKRFIHLEAEEHRD 238 Query: 299 ISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAG 349 S + L+ ++ + + A D LT LPN ++ + Sbjct: 239 ASGRITLVSGTIQDITSRKLAEEKIRYLAYYDSLTGLPNRVLFKEHLRRALATSEQHKRQ 298 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL------------YQLP 397 + L +D + ++ G ++ + L ++ + + +L Sbjct: 299 LAIMLLDLDRFKGINDSLGHDAGDLLLQQVADRLRLRVRPYDTVSRDSEEQRDSLIARLG 358 Query: 398 GSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++L G T + + N + + + + L+ L Sbjct: 359 GDEFTILLEGITTPEAAARVARRVIEALEAPFALNGNEVFISCSIGISIYPHDGTDLEIL 418 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 + + + ++ + ++++L +R A ++ + L+ QP + Sbjct: 419 VKNADVAMYCAKDLG-CSTFQFYTQEMNSVSLQRLILETHLRKAFEKEEFFLHYQPQIDC 477 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + + + G+++P F+PL + L D VL ++ K L Sbjct: 478 VTNRIIGLEALARWNNPELGLVSPGSFIPLAEETGLIIALDRWVLATVCKQLEAWQAAGI 537 Query: 572 GP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R +VNL L+ N+ I ++ R + + LEITE NAE + + L Sbjct: 538 PLVRVAVNLSARHFLKANLNKTIQQIRSRGAAARDHLDLEITEGMLMENAEEVVSVLGML 597 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G I+IDDFGTGY++ L RL +KID F+ N A +V +I LA + Sbjct: 598 QETGVNISIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQSGDNVESASVVTAIIALAHSL 657 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET Q L + G + +QGYL RP P Sbjct: 658 GKEVVAEGVETSTQLQFLKENGCRVIQGYLFSRPLPED 695 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 98/488 (20%), Positives = 175/488 (35%), Gaps = 19/488 (3%) Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRS 315 + E ++ ++ + + R Sbjct: 324 HRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTIARDITER 383 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + + QA D LT LPN LE S L IDN + ++ Sbjct: 384 KHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDNFKRINESL 443 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 G +R + L ++ + + + G E +VL + +++ + + Sbjct: 444 GHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAILHKVRAAFET 503 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + + + + LL +S A ++ + Sbjct: 504 PLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNR-YQFYAPEMNAR 562 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 + + L +R ALD+G+ L+ QP + G + +L G++ P F+PL Sbjct: 563 GQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPL 622 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L VL + R SVN+ + + ++ ++ + Sbjct: 623 LEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQVEQVLREE 682 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P + LEITE A + ++ + L G R+AIDDFGTGY++ LKR D + Sbjct: 683 CMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDAL 742 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F++D + A I + L L VVAE VET +Q A L + +QG+ Sbjct: 743 KIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFH 802 Query: 721 IGRPQPLA 728 RP P Sbjct: 803 FSRPLPAD 810 >UniRef50_Q220B0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B0_RHOFD Length = 701 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 97/468 (20%), Positives = 184/468 (39%), Gaps = 22/468 (4%) Query: 283 QGVETEYSLAFILA-VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + + ++ ++ ++ + + +V + + A D LT LPN R L Sbjct: 225 RRDGSVFPISVSVSELMHNGQTQFIGLVHDITQRRRSEENIYRLAFYDKLTGLPNRRLLM 284 Query: 342 QAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + L +D+ + ++ +GL ++ + + L +++++ + Sbjct: 285 DRLKQALITSTRTGQHGALILLDLDHFKQINETFGLDAGDELLQQVGQRLPTCVRDDDTV 344 Query: 394 YQLPGSELLLVLSGPETE--------GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD 445 + G E +++L ++ + + + ++ F Sbjct: 345 SRFGGDEFMVMLEALSSQPQEAAIQAEAIAQKILLALAQPYRLRGHTHGTTPSIGVVMFR 404 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 Q +L LL Q+ A + + + + L +R L + + Sbjct: 405 QAQVSLDDLLKMTDVAMYQAKAAGRN-TVRFFDPALQALALARTALEENLRRGLALQEFV 463 Query: 506 LYAQPIRNKEG--EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 L+ Q + +G G + +L G++ P +F+PL + VLES + L Sbjct: 464 LHYQIQVDHQGLPTGAEALLRWQHPVRGMVPPAQFIPLAEETGFILPLGQWVLESACRQL 523 Query: 564 ATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 +VN+ L Q + + + +P + LE+TE + + Sbjct: 524 VAWSHQRATGSWTLAVNVSALQFAQPDFVAHVTSALQATSANPTLLKLELTESMLVGDVQ 583 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + + L G A+DDFGTGY++ LKRL D +KID FV+D++ N DA+I + Sbjct: 584 DVITKMNALKAQGVSFALDDFGTGYSSLSYLKRLPLDQLKIDQSFVRDLLINPNDAVIAQ 643 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I L L V+AE VET Q L +G QGY GRP P A+ Sbjct: 644 TIVALGHNLGLQVIAEGVETVGQHDYLASIGCDAFQGYYFGRPVPAAE 691 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 91/475 (19%), Positives = 184/475 (38%), Gaps = 25/475 (5%) Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 V + + + + + + + ++Y+ + + + QA Sbjct: 345 VRETVRRHCDGRLIPVSMIGFPIE-----IAGETQGIVYIYQDISERKAFEEQITHQAFH 399 Query: 329 DPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN E+ + + + ++ + ++ G + + Sbjct: 400 DALTGLPNRSLFADRLERALTRARRRGDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEV 459 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMG 436 R L ++ + + +L G E ++L +T+ + +V + + + Sbjct: 460 ARRLSGCVRSMDTVARLGGDEFAVILEEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPE 519 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + LL ++ + + + + + + L +R Sbjct: 520 ASIGIVLHTRDYAAADDLLRDADIAMYRAKEQGRASMI--FDRKMHQEILEAISLETDLR 577 Query: 497 TALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL+ G+LLL+ QPI + G++ ++ D G++ P +F+PL + L Sbjct: 578 QALEAGELLLHYQPIVDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGR 637 Query: 554 QVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 V++ + L + SVN+ ++ + + ++ + P + LE Sbjct: 638 FVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLE 697 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE +AE + + +L G +IAIDDFGTGY++ L++L D +KID F+ Sbjct: 698 ITESVLMHDAEHTARELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQ 757 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + IV+SI LA++ L+V+AE VE Q L QG++ RP Sbjct: 758 GCDGESQEIVKSIISLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSRPV 812 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 127/704 (18%), Positives = 240/704 (34%), Gaps = 57/704 (8%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 ++ W L + + + A L++ +FW G Sbjct: 12 VSSFWIELLFTVVIMSLALFIRLAIAPVDAGLQYVTFFPAI-------TLAAIFW-GCRA 63 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML-FYYLTRMIV 191 + ++F P +F + I +L+ L +L+ + + R Sbjct: 64 GLLAMAMGVGFATYFFIP-PFYSFENEGLKIMAWSNLVFLVDGLLVSFSIEAMHRYRKKS 122 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND--FIAGYLVPVFFI 249 A+I +L E LL+ D I + + Sbjct: 123 EVELAEIKLAHSQVSTLNSELDEMLHKQRETEQELLISATAFEAQDGIMITDSKGVILRV 182 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF--------------------LQGVETEY 289 + L ++ +F + Y Sbjct: 183 NQAFTDITGYSSEEAVGQTPRLLKSGRHDADFYAAMWQCIKNTGQWSGEIWDRRKNGEIY 242 Query: 290 SLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------R 338 + + SF + + R H A DPLT LPN Sbjct: 243 PKWLTITEVKSFDGSVVHYVSSQVDITARKASEDRIHNLAFYDPLTQLPNRRLLLDRLRH 302 Query: 339 ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 ++ + + + +D + ++ G + ++ + L ++ + + +L G Sbjct: 303 SVSFSLRDGRHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDTVARLGG 362 Query: 399 SELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQET 450 E +++L G E + + + + + G FD + +T Sbjct: 363 DEFVVLLDGLAGNLHEAAAQAKQIGRKIIDTLNQSYDLAGHEYQSGASIGIALFDEHCQT 422 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL Q Q+ L + + +V L + AL Q + QP Sbjct: 423 AEDLLKQADIAMYQAKKAGRN-TLRFFDPEMQASILARVALEKDFKDALLQEQFYICYQP 481 Query: 511 IRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-- 566 + + G + ++ GI++P F+PL + L VL++ + L+ Sbjct: 482 VISREGRVAGAEALVRWRHSIRGIVSPADFIPLAEETGLIVPLGNWVLKTACRQLSDWSS 541 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 D + +VN+ L Q++ ++ L + +P+ + LE+TE S+AES + Sbjct: 542 RDDTRDLTIAVNVSARQLKQEDFVTTVMGLIEETGANPRRLKLELTESMLVSDAESIIVK 601 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L + G A+DDFGTGY++ L RL D +K+D FV++I T +I + +L Sbjct: 602 MNLLKEAGITFALDDFGTGYSSLAYLSRLPLDQLKVDQSFVRNIETEDSAVVICAATINL 661 Query: 687 AKAKSLSVVAEFVETQQQQALLHK-LGVQYLQGYLIGRPQPLAD 729 A L VVAE VE + Q+ L +LQGYL +P + + Sbjct: 662 AHNLKLKVVAEGVENEAQRYFLSSVHQCDFLQGYLFSKPVAIDE 705 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 109/555 (19%), Positives = 211/555 (38%), Gaps = 31/555 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-LLCTPYENDFIAGY-------LVPVFFI 249 RR + + S ++ +L + I GY L P F Sbjct: 527 TSLRRAERELMLSAQVFEHGSEAVFITDASHRILRVNPAFEAITGYAAGEVLGLTPDFRC 586 Query: 250 IFTLGVGKLRYPFL----NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + G + + W +C +++ E+S ++ + Sbjct: 587 VSSPGGTSISQRWELAEQTGRWQGEIVCRRRSGEHY-----YEWSALSVVRHANGSVLYF 641 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQEAGKSFCCLRIDNL 360 + + R A DPLT LPN L + + +D Sbjct: 642 IGQFSDISAVKAAEARALRLACFDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRF 701 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + ++ + R L+ ++ + + + G E +LVL G L+ + Sbjct: 702 KNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQ 761 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L S I + L + F + LL + + Sbjct: 762 LLADVSSPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRHADAALYHAKSRGRN-TYRFF 820 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + + ++ + + + +R+AL++G+ L+ QP + G + +L + G+++ Sbjct: 821 TREIDDRVSEYLHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMIS 880 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ + L + V+ + + +VNL + + I Sbjct: 881 PVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSRS-VIEAI 939 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + P+ + +E+TE + + + +E L G +A+DDFGTGY++ LK Sbjct: 940 DEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLK 999 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D +KID F++DI + + +IV +I +A + V+AE VET+ Q L + G Sbjct: 1000 RFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGC 1059 Query: 714 QYLQGYLIGRPQPLA 728 +QGYL+ RPQP A Sbjct: 1060 DEVQGYLVSRPQPAA 1074 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 98/548 (17%), Positives = 198/548 (36%), Gaps = 26/548 (4%) Query: 206 PSLGKEKRAFTLSWLAALSVLLLL--LCTPYENDFIAGYLV-----PVFFIIFTLGVGKL 258 + TL VLL L N A L + + + Sbjct: 370 ELGAARAQFETLFEQLPEGVLLFDESLAVITHNREAANLLEYASDALLLLQVSDIEAMDD 429 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVET--EYSLAFILAVLISFSVCLLYMVRIYHRSE 316 + + + N+ + + ++ + L + + + R + Sbjct: 430 QNAIAARKEKLQLTGIDNFESRYRTRSGRLMDVDVSVQVVQLPNGRIAFQTLFRDITEQK 489 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + + A D LT LPN R L+ ++A + L +D+ + ++ G Sbjct: 490 QTSAQIEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLALMYLDLDHFKDVNDSLG 549 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 ++ + L ++ ++ L ++ G E +L+L+G + + + S+ Sbjct: 550 HGAGDVLLQIVAERLQGCVRADDTLARMGGDEFVLLLNGVNGADDVASIAGKIIHELSQP 609 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + N L + + LL Q+ + + Q+ Sbjct: 610 MRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQGRA-TYRFYTQALHDQS 668 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++V L +R AL++ + LY QP + G + ++ G ++P +F+P+ Sbjct: 669 VERVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEALIRWNHPGMGQVSPARFIPIA 728 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL-LQKNIAGRIIRLFKRYH 601 Q L V++ + S N+ + + Sbjct: 729 EQSGLIIDIGNWVMKQACHQAKRWHDQGWDIKVSFNVSARQFMRSGELMQSLRDALAESG 788 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P + +E+TE + + + ++ G ++A+DDFGTGY++ L+R I+K Sbjct: 789 VDPTRMEVELTESLLL-DPQGMGEILHEIRALGIQLALDDFGTGYSSLSYLRRFPISILK 847 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV N DA +V++I +A +S++AE +ET Q+ +L G + QGY Sbjct: 848 IDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQGYHY 907 Query: 722 GRPQPLAD 729 P P + Sbjct: 908 SCPVPATE 915 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 96/446 (21%), Positives = 174/446 (39%), Gaps = 19/446 (4%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-------- 349 L ++ M + + L D LT LPN L EQ Sbjct: 953 LADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKRKQQQPNY 1012 Query: 350 -KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G ++ +++I L ++ + + + G E +++L Sbjct: 1013 LFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEFVILLEDL 1072 Query: 409 ETEGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 M + ++T L+ +S Sbjct: 1073 TIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNADIAMYRS 1132 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 + ++ Q T+ + L +R AL++ + ++Y QPI N+ G++ + Sbjct: 1133 KEAGRAR-YTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRNLLGFEAL 1191 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNL 579 + + + G+++P F+P+ + L VL + + + R SVNL Sbjct: 1192 VRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNL 1251 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L Q N+ RI + + + + LEITE +N E + Q+ +++I Sbjct: 1252 SGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSI 1311 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L L D +KID FV + + IV +I LA + VVAE V Sbjct: 1312 DDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGV 1371 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQ 725 ET+Q L +LG ++ QGY +P Sbjct: 1372 ETEQHLRQLQQLGCEFGQGYFFSKPL 1397 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 647 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 124/673 (18%), Positives = 224/673 (33%), Gaps = 29/673 (4%) Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL-TSRYVWQRLFWLGLVTPIGIKCS 139 F + R WR T G++ + Sbjct: 179 WGFTYVTLRFPDALASARLPLLTQRGYAYELWRTAPDTGERQSIEASGNGVLDAPVERTL 238 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 G + I+ + F L + L Y + + + Sbjct: 239 ELPNGQWTLSVAPINGWGQSDRLGFEATINFFLSLLMAYLAWLLYEMR--VRDQGLEVQV 296 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP------VFFIIFTL 253 R + + TL + + L L Y +P + I L Sbjct: 297 NERTAEILATQRQLQATLGAIPDPLLELGLDGRCYNAHSSRTDSLPWPTEDLIGRTIMEL 356 Query: 254 GVGKLRYPFLNLTWAVST--LCLLNYNQNFLQGVETEYSLAFIL-AVLISFSVCLLYMVR 310 + L + + L + ++ + L L + R Sbjct: 357 LPPQACQIVLAALQEAKEKECSIGKQIKVPLDNGMHWFEMSVTRKSALPGEEPLFLVLCR 416 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEF 362 S+ R+ L A D LT LPN L + L +D+ + Sbjct: 417 DITESKQAERKIQLLAHFDSLTGLPNRVLLTDRCNLALSAAQRNGTPLALLLLDLDHFKN 476 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + ++ L ++E + + +L G E +LVL G H+ +L Sbjct: 477 VNDSLGHRVGDEVLIALAGRLKGAVREQDTVCRLGGDEFILVLPETNAAGAA-HIAEMLL 535 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 L + F G+ L ++ Sbjct: 536 QSALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRN-NYRFFTA 594 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 + ++ + + L N +R AL++ L L+ QP + G + +L + G + P Sbjct: 595 EMQARSERTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHPELGAVPPA 654 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ L VL + ++ L SVNL + ++ + Sbjct: 655 EFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHADLPELVTS 714 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + LE+TE A ++ ++ + LH+ G R++IDDFGTGY++ LK+ Sbjct: 715 ILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKF 774 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + IKID FV+DI ++ D IV +I +A + + +AE VET+ Q L G Sbjct: 775 RVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTE 834 Query: 716 LQGYLIGRPQPLA 728 +QGY RP P+ Sbjct: 835 VQGYYFSRPLPVE 847 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 99/473 (20%), Positives = 189/473 (39%), Gaps = 30/473 (6%) Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 L+ E S+ F ++ IS ++ + + QA D L Sbjct: 406 FIELHNCTREYHWSLQEESILFAMSASISAAL----------QRQDKEEIIRHQAFHDAL 455 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN + + +D + ++ G + ++ + L Sbjct: 456 TDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLINDTLGHSIGDELLKEVALRL 515 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQ----HMVNILNSRQIHWNNTGLDMGYGA 439 +++ + + + G E ++L E+ +++ L + L + Sbjct: 516 QDCLRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDALKAA-FVIRRHELFVTTSI 574 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + + + LL +S ++ +Q +L N++R AL Sbjct: 575 GIAIYPEDGQEAEILLQNADVALYRSKEQGRGTC-QLYNPTMN--AKEQFILENSLRHAL 631 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 D+ + +L+ QP N E G + ++ + G+++P F+P+ + L VL Sbjct: 632 DRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIPIAEETGLIVELGEWVL 691 Query: 557 ESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + + ++NL Q N+ + ++ + ++PQ + LEITE Sbjct: 692 RTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIESTGLNPQQLELEITETI 751 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 A N E + + L G IA+DDFGTGY++ LK+L + +KID F++D+ + Sbjct: 752 AVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFNTLKIDQSFIQDLKPASK 811 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D I+ ++ L K L VVAE V+ ++Q LL L + +QGYL RP + Sbjct: 812 DVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQGYLFSRPLSVD 864 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 91/456 (19%), Positives = 176/456 (38%), Gaps = 15/456 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RA 339 E + + + + + QA D LT LPN +A Sbjct: 867 EAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFLAIDRLKQA 926 Query: 340 LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + QA Q+ + + +D+ + ++ G ++ + + L +++++ + +L G Sbjct: 927 ILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGD 986 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L++L + + + + S + + + + + + L+ Sbjct: 987 EFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLMR 1046 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE- 515 ++ + ++ + +R AL + + L QPI + Sbjct: 1047 NADAAMYLGKRGGRND-FKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRF 1105 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G + +L + G ++PD+F+ + + L + V+ + + Sbjct: 1106 QTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGSPI 1165 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VNL P + + I I+ + LEITE+ + S IEQLH+ Sbjct: 1166 WVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHEM 1225 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 FR++IDDFGTGY+ L + + +KID F+ DI N +V++I + L Sbjct: 1226 DFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLKLQ 1285 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET +Q +L G Y QGY RP + Sbjct: 1286 VIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEE 1321 >UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYF3_METFK Length = 747 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 128/728 (17%), Positives = 255/728 (35%), Gaps = 35/728 (4%) Query: 34 LAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN----LWNFHLSFLQTAVM 89 A+++ + ++ A + + +F W + + + + A Sbjct: 11 SAVVNVAILYQAQLVTLQHVLPALLFAWLVNALGVLLLLPLLLNITWAEIRSFWQRRARF 70 Query: 90 LGSQTFVVLCACAILR----WQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGS 145 V AI + + W L V +G+ + ++ +V Sbjct: 71 SLLALLAVTVEWAIFQLVPDYADQYMWFAFLVLPLVVLISMRMGITGVSMVVLALSIVAL 130 Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP--HFAQILWRRD 203 + + +L +++ + +R + ++ +R Sbjct: 131 MSAQVDYQAGLDHAGYQPVWALWVLMATLSIVGMLIAALQSSREVTERALRHSETKFRAV 190 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 I + L + ++ D + LV + + + + Sbjct: 191 IENAQDGIVSIDEDGRLVEFNHAAEVMFGYRREDVLGKMLVDILIPLSLRDAHRRGHE-R 249 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRW 322 L VS + + L+ TE+ + + L + LL R + Sbjct: 250 YLASGVSKMLDRRLELSALRADGTEFPVEVTITSLKEQGLPLLTGFFRDLTERRKVESEI 309 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT LPN R L + + +DN + ++ G + Sbjct: 310 RNLAFYDALTTLPNRRLLLDRLQQAIAASVRHGRHGAVLFIDLDNFKALNDSRGHDIGDL 369 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---------ETEGRLQHMVNILNSRQ 425 + + R L ++ + + +L G E ++VL +T Q ++ I+N Sbjct: 370 LLVEVARRLRQCVRNEDTVARLGGDEFVIVLEDLSLNLEQAIAQTRQVAQKVLEIIN-HP 428 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 F+GN +++ LL + ++ A L + + Sbjct: 429 YQLGEIEHHNSSSIGIVLFNGNFVSMEELLKRSDTAMYEAKAAGRN-TLRFFDPAMQAAL 487 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++V + +R A+ Q L L+ Q + E G + +L D G++ P +F+ + Sbjct: 488 ERRVDMELQLRLAIVQKQLRLFCQVQVDAERKVFGAEILLRWQHPDHGLLAPKEFVGIAE 547 Query: 544 QFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L VL + L + +VN+ + + ++ + Sbjct: 548 DSGLIVSIGHWVLYNACLQLKDWEARPGFDSLQLAVNVSARQFRHADFVDEVRKILQSTG 607 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 P + LE+TE N ++ + L + G R ++DDFGTGY++ LKRL +K Sbjct: 608 ADPSLLKLELTESVVLDNIADAVAKMNALRELGVRFSMDDFGTGYSSLAYLKRLPLSQVK 667 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV++I + DA +V++I ++ L V+AE VET+ Q LL G ++ QGYL Sbjct: 668 IDRSFVREIAEDASDAAMVQAILAMSNTLGLKVIAEGVETEVQFELLQSYGCRFFQGYLF 727 Query: 722 GRPQPLAD 729 +P + D Sbjct: 728 AKPMLIQD 735 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 109/473 (23%), Positives = 193/473 (40%), Gaps = 24/473 (5%) Query: 278 NQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 L Y I+ + + + RR A D LT L Sbjct: 339 ETQRLHADGYPYPQWEIVTPVQDDRGEISHFVICFEDISERKEAERRIQDLAYYDELTGL 398 Query: 335 PNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN R L + G + + +D+ + ++ G ++ + L L Sbjct: 399 PNRRQLHETLAHAFGEASRDYLIGALLFIDLDHFKTINDSLGHATGDWLLKEVASRLKRL 458 Query: 387 MQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYG 438 +++ + L +L G E +L+L + E + + L S + L +G Sbjct: 459 VRQGDCLARLGGDEFVLLLPSLSASPPQAEMQADLIAERLISEIAAPYNHAGQVLHIGAS 518 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F G ++ + LL Q Q+ + + + Q +++L+ N +R+A Sbjct: 519 VGITLFPGREQGVDDLLKQADTAMYQAKSAGRK-TRRFFDASMQLQADRRLLIHNELRSA 577 Query: 499 LDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L+Q +L LY QP + G + ++ +++P +F+P+ + +L V Sbjct: 578 LNQQELTLYYQPQHMVEGGDIIGVEALIRWQPPGRALVSPAEFIPIAEETDLIVDIGNWV 637 Query: 556 LESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + P+ SVN+ + RI + + P ++ LEITE Sbjct: 638 LYEACAQYVRWEENGIHIPQLSVNVSAKQFHATDFVDRIHDVLASTGMDPASLNLEITES 697 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 +AE ++ + +L G AIDDFG GY++ LKRL AD +KID F++DI + Sbjct: 698 VVLGHAEDTISKMSELKALGISFAIDDFGAGYSSLSYLKRLPADELKIDRSFIQDIPRDG 757 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + IV ++ +A+ +V AE VE++QQ L G + QGYL +P P+ Sbjct: 758 DNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFLQAQGCHFYQGYLASKPLPV 810 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 101/566 (17%), Positives = 211/566 (37%), Gaps = 27/566 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + + I + E R L ++L+ + A ++ Sbjct: 131 LAARVHTHIALKVAYRHLKDSELRYRKLVETTPDAILVEGEEGIVFLNSAAVKMLKADNP 190 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN----------FLQGVETEYSLAFILAVLI 299 LG L + + + + + Q + + Sbjct: 191 DKLLGGALLDFVLDDQKEYAAMQLKQACSVDRSAGPPEVMLLQQLTGGRVEVEVNCIPIS 250 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGK 350 S C ++++R QA D LT LPN E+ Sbjct: 251 YHRSPCHMFVLRDITERRRQEAAIEFQATHDALTGLPNRSLFLDRVTQSINHARRNESRL 310 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G +R + + L + + L + G E +L++ E+ Sbjct: 311 ALIFIDLDKFKLINDTLGHNAGDDLLRIMSKRLQECTRNCDTLARFGGDEFVLLVDNLES 370 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E L H+ L S + + F + + ++ L+ ++ Sbjct: 371 EADLTHLAARLISSVSAPVLLLGQSHSITCSLGISSFPEDGDNVEVLMRHADIAMYRAKE 430 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + + +++ L ++++ AL+ + +L+ QP + + G + ++ Sbjct: 431 SGRN-SYQFFTHQMQDRLNERLKLESSLKQALENDEFVLHYQPQVDLSTGKIIGLEALIR 489 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 G++ P F+P + L + V+ ++ K L + ++N+ L Sbjct: 490 WQSPTLGLVPPGDFIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVPVAINISALQ 549 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +++ + + Y + P+ + LE+TE + + +S+ +++L G ++IDDFG Sbjct: 550 FMEQKTEELVKQALNEYMVEPKYLELELTESLSMLDPVTSISLMQRLKDIGVSLSIDDFG 609 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY+N LKR + +KID FV + N D IV++I ++++ L +AE ET Sbjct: 610 TGYSNLSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAG 669 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q ALL +QG+ RP P A+ Sbjct: 670 QIALLAAENCDAIQGFYFSRPLPEAE 695 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 104/448 (23%), Positives = 181/448 (40%), Gaps = 15/448 (3%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------E 347 A + + R + H QA D LT LPN L+ Q Sbjct: 260 APHPGQFLGTYGIARDVTDRKHAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGN 319 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + ++ + + L ++E + L +L G E L+L Sbjct: 320 EEVAVLFLDLDRFKVVNDSLGHSVGDQLLQQVAQRLRACLREGDTLARLGGDEFTLLLPA 379 Query: 408 PETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ++ + + +N L +G F + ETL+ L+ Sbjct: 380 IPDRPAVERVAQKCIDALEQPFMVHNHRLFLGVSIGIALFPEHGETLETLIKHADVAMYH 439 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 H ++ + + + + +R AL+Q + + QP + G + Sbjct: 440 VKEHGKGH-YTFFDQAMGSRIDHHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTGMEA 498 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 ++ + G ++P +F+P+ Q L +L S + L P +G R +VNL P Sbjct: 499 LIRWQHPETGEVSPREFIPVAEQTGLILPIGEWLLRSACEELLRWPDGNEGLRLAVNLSP 558 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + Q++ R+ + + + LEITE + ES + + L + G I IDD Sbjct: 559 LQVHQRDFVDRVRAICDETGFPLRRLDLEITENLLMRDVESVVEKLRTLSRLGVTITIDD 618 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+RL +KID FV I N +V +I +A L+VVAE VET Sbjct: 619 FGTGYSSLGYLQRLPIHALKIDQSFVHAIRENEEKGTLVETIIAMAHGLGLNVVAEGVET 678 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q L +L +QG+ P + Sbjct: 679 KRQLDYLRRLQCGRMQGFYFSYPLSGHE 706 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 98/470 (20%), Positives = 179/470 (38%), Gaps = 25/470 (5%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + ++ + + + + + A D LT LPN R Sbjct: 575 RKNGEVFPEWLTISAVKDPAGQATHYVATFTDLSTRKSAEDQIKSLAFYDTLTGLPNRRL 634 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + +D+ + ++ YG + ++ + + L ++ + Sbjct: 635 LLDRLKQALASGARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRLSHYLRAGD 694 Query: 392 KLYQLPGSELLLVLSGP--ETEGRLQHM------VNILNSRQIHWNNTGLDMGYGAAWGR 443 + + G +++L + + + S+ + Sbjct: 695 TVARPGGDSFVVLLEALSTNSVEAATEAENTGEKIRLALSQPYQIADHAHRSTASIGVTL 754 Query: 444 FDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 FD QE + L + Q+ L + + L +R A+ Sbjct: 755 FDDRQQEGIDEPLKRAELAMYQAKTAGRN-TLRFFDPQMQTAVMAMAALEADLREAVRSN 813 Query: 503 DLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LLY Q + + G + ++ G++ P +F+PL Q L VLE+ Sbjct: 814 QFLLYYQAQVSGERQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLGQWVLETAC 873 Query: 561 KWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 LA + +VN+ L Q + +++ KR +PQ + LE+TE Sbjct: 874 AQLAAWASQPERAHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKLELTESLLVH 933 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 +AE + + L + G ++DDFGTGY++ LKRL + +KID FV+DI+ + DA Sbjct: 934 DAEDVIAKMITLKEQGVGFSLDDFGTGYSSLSYLKRLPLNQLKIDQGFVRDILHDANDAA 993 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I + + LA LSV+AE VET+ Q+ L G QG+L R P+ Sbjct: 994 IAKMVVALADTLGLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPID 1043 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 99/518 (19%), Positives = 202/518 (38%), Gaps = 25/518 (4%) Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV-----STLCLLNYNQNFLQGVETEYS 290 ++ I L+ + I LG R + + + + L + Sbjct: 380 SNLILMLLIAIMIIAAFLGFIYCRRSLIMPIYQMVNQLQRPVTEGGQVYPELLDDRRQDE 439 Query: 291 LAFILAVLISFSVCLLYMVRI----YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + + L R + + + AL DPLT LPN + Sbjct: 440 FGLLAYHFNQSKMALDSNNRDLKLQINERKQAEYQLKHLALHDPLTGLPNRLLFQDRLEQ 499 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + + +DN + ++ G ++ + L ++ + + +L G Sbjct: 500 AIALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSCTGRKTDTVARLGG 559 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +++ T LNS I N ++MG + + + LL Sbjct: 560 DEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMGSSIGITIYPDDAANSEELL 619 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RN 513 Q+ + ++ + + +L + +L + LY QP+ + Sbjct: 620 RNADIAMYQAKDDGRN-TVRFFTSEMNARLQRNKEVLTDLAESLTKEHFELYYQPLFTID 678 Query: 514 KEG-EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + G + ++ + G++ PD+F+ + + L VL + + Sbjct: 679 QNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDWVLAQACREIKNFLNAGIT 738 Query: 573 P-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 + ++N+ P+ +K++ ++ + ++ +S + + LEITE N + ++ ++ LH Sbjct: 739 VFKVAINISPVQFRRKDLLQHMLMILAQHDVSAELIELEITEGAVMDNVDQAIETMQALH 798 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 GF++A+DDFGTGY++ LKR +KID F+ D+ + I +I ++ + Sbjct: 799 DAGFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDLENDDDSKSITTAIIQMSHSLG 858 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET++Q L Y+QGY GRP P ++ Sbjct: 859 LHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASE 896 >UniRef50_UPI00016AFAA6 predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA6 Length = 709 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 117/616 (18%), Positives = 231/616 (37%), Gaps = 36/616 (5%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTA-VLIYNMLFYYLTRMIV---------SPHFAQI 198 T + + D+ +++ + AQ Sbjct: 78 LKAIDHTRDAPVIFMTALSDVQDKVAGFAAGGIDYLTKPFQIVELAARVKTHLALRAAQR 137 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 A E R L A+ ++L+ + D A + + F + Sbjct: 138 QLVLANARLASSEARYRRLFETASDGIILVDMAGSRITDVNASLVEMLGFERDHFVGRPI 197 Query: 259 R--YPFLNLTWAVSTLCLLNYN-------QNFLQGVETEYSLAFILAVLISFSVCLL-YM 308 PF + S L + + T + F+ ++ ++ Sbjct: 198 GSVPPFEAVPECASLCATLAASGEIRCEHTSLATATGTLLDVEFLASLYTVGGARIVQCN 257 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNL 360 VR + R AL D LT LPN L+ +A + + L +D Sbjct: 258 VRDITERKQAEARVRYMALHDALTGLPNRALLQEHLAQAIARARREGGCVAALMLDLDRF 317 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + + L ++E + + +L G E ++ L+ + + + Sbjct: 318 KHVNDSLGHHIGDRLLEAASMRLRGCLREGDTVARLGGDEFVIGLADVDGDQGAGEVATR 377 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + SR N L +G R+ + E +Q LL + A+ Sbjct: 378 VLTTLSRPFFVENHELHVGCSIGISRYPADGEDVQTLLRAADTAMYDAKANGRG-IYRFF 436 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 ++ +++ L IR A D+G+ +L+ QP + G + +L + G+++ Sbjct: 437 TPELNAAAQQRLALARDIRYAFDRGEFVLHYQPQVCTHSGAITGVEALLRWRHPEHGLIS 496 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+P++ + L VL + + R +VNL L + +I + Sbjct: 497 PLQFVPMLEELGLIVAVGQWVLRTACQQSVQWQSAGLPPVRMAVNLSAYQLQRGDIVRTV 556 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + ++ + + LE+TE A NA+ ++ + + + G +++DDFGTG+++ L+ Sbjct: 557 DEALRETGLAAEWLELELTETMALYNAQEAIRIMREFKQLGVSLSLDDFGTGWSSLSYLR 616 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D IKID F++D+VT+ + +V+ I LA L +AE VET QQ L + Sbjct: 617 QFPIDRIKIDRSFIRDVVTHPGASAVVQGIMTLANHLGLQCIAEGVETVQQFGFLQERAC 676 Query: 714 QYLQGYLIGRPQPLAD 729 +QG+L+ P + Sbjct: 677 GEIQGFLVSPALPAHE 692 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 90/465 (19%), Positives = 189/465 (40%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y +A + +V + + + QA D LT LPN Sbjct: 489 RKSGETYPEWLSIATVTNDKGETVQYVAAFSDITKRKQAEETILHQANYDFLTDLPNRNL 548 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + +D +F++ G + +R + L ++E++ Sbjct: 549 FHDRLQTELKRSQRSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESD 608 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L + + + + + L + + + Sbjct: 609 TIARLGGDEFTVILPELHGPEGVARLAQGMIDKLEERYCIQDHELFISASIGITIYPEDA 668 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + + L+ ++ + + ++ + + +R AL++G ++ Sbjct: 669 DNMMDLVKNADVAMYRAKENGRG-SFCFYTAEMNADARQLHKIEQALRVALEEGQFWIHY 727 Query: 509 QP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ G I+ PD+F+P+ + L L VL S++ +A Sbjct: 728 QPYVQQSSGLITGVEALIRWRNSAGEIVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQ 787 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + FSVN+ + ++ G+I + I+PQ+++LEITE + E ++ Sbjct: 788 WQREGHPDITFSVNVSARQFQEGHLVGQIKAALQENQINPQSLMLEITESLMIRDPEHTL 847 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++++ G R+A+DDFGTGY++ LK+ D++KID F+ I + D +V +I Sbjct: 848 NMLKEIKALGVRVALDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIV 907 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + + V+ E +E QQ ++ Y+QG+ RP P + Sbjct: 908 SMAHSLGVGVIGEGIENDQQLQRVNLHACDYVQGFFYSRPMPYDE 952 >UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V069_9PROT Length = 734 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 96/493 (19%), Positives = 184/493 (37%), Gaps = 25/493 (5%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSE 316 P LNL + + E L + + LL +V + + Sbjct: 233 PLLNLHQQAQVVLTSGIALRGIDAALGEKWLRLTITGIRLAEEEEEEDLLVIVEDITKLK 292 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 A D LT LPN L + + + +DN + ++ G Sbjct: 293 AQAVHIEQLAFYDSLTGLPNRSLLRDRVQRVLAHSARHKNHGAILFIDLDNFKALNDTKG 352 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS 423 + + + + L ++ ++ + ++ G E ++VL + + Q + + + Sbjct: 353 HNIGDLLLIEVAKRLQDCVRNSDTVARMGGDEFVVVLEELNEDTQQAVAQAQDIGETVLA 412 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 R + F N+ + + Q+ L + Sbjct: 413 SLNRPFNLQGFEHYSSASIGISLFRDNEIGMDDVFKHADTAMYQAKTSGRN-TLRFFDPD 471 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKF 538 + + +L +R AL L+ Q N + G + +L L G+++P F Sbjct: 472 MQASLEARAVLEIDLRHALSLQQFKLFFQIQMNAANQPIGAEALLRWLHPKRGLVSPLDF 531 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRL 596 + L L VLE+ + + + +VN+ Q + ++ Sbjct: 532 ISLAEDTGLILPIGQWVLETACTQIKAWEANPLACELQLAVNVSARQFHQPDFVEQVRAA 591 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++ P + LE+TE +N ++ + L + G R ++DDFGTGY++ L +L Sbjct: 592 LEKTGADPARLKLELTESVVLNNINDAVIKMSDLKEVGVRFSMDDFGTGYSSLSYLTQLP 651 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV +I DA+IV++I + + + V+AE VET+ Q+ L + G Sbjct: 652 LDQLKIDLSFVYNIGIKPTDAVIVQTIISMGNSLGMEVIAEGVETEAQRDFLERNGCHAY 711 Query: 717 QGYLIGRPQPLAD 729 QGYL +P + + Sbjct: 712 QGYLFSKPVSIGE 724 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 115/456 (25%), Positives = 191/456 (41%), Gaps = 21/456 (4%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 A L+ +I ++ MV + + A DPLT LPN R L Sbjct: 582 AVELSGMILGDSHIVTMV-DQSQRKAAEEEVRYLAYNDPLTGLPNRRLLLDRLEQALAMS 640 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +DN + ++ G M +R + R L + E+E L + G E ++ Sbjct: 641 ARHQLCGAVMMLDLDNFKTINETQGPDMGDRLLREVARRLRDCVPEDETLARHGGDEFVV 700 Query: 404 VLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 VL E R + M + + + F G +E+ LL Sbjct: 701 VLKDLGADPQEAANRAEEMGQTILAAIRAPFDIDGQQHHTALSVGIAIFRGVRESADELL 760 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-K 514 + ++ A L + + +++ L +R LD G L L+ QP + Sbjct: 761 KRSDLAMYEAKAAGRD-TLRFFDPQMQAAVSERAALEADLRAGLDAGQLELFYQPKVDQG 819 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKG 572 G + ++ D G ++P +F+PL + L R V+ S LA Sbjct: 820 RITGAEALVRWRHPDRGFISPAEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGE 879 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VN+ P + + +++ + + LE+TE + E ++ + QL Sbjct: 880 LTVAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRG 939 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 +G ++DDFGTGY++ LKRL +KID FV+D++T+ DA+I R+I L + L Sbjct: 940 YGVGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGL 999 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET+ Q+A L + G QGYL+ P A Sbjct: 1000 RVVAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAA 1035 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 96/465 (20%), Positives = 191/465 (41%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + ++ + + + + R + ++ DPLT LPN Sbjct: 463 RRNGEIFPKWLAISAIRNRQGVISHFVGVFNDISRQKSTEQQLERLVFYDPLTQLPNRVL 522 Query: 340 LEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 E G + + +D + ++ G + + + + L+ +++++ Sbjct: 523 FRDRLIHEVGVAERSNKLMSLLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSD 582 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L G E H+ + L +G + Sbjct: 583 TVARLGGDEFAIILPGMERAEDAAHVAETIINQLQVPFSIEENELFVGASIGIAVHGQDG 642 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L ++ ++ Q K++++ +R A+D +L+L+ Sbjct: 643 DDYDSLTMNADAAMFKAKESGKG-TYKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLHY 701 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + ++ + G++ P +F+PL + L VL + Sbjct: 702 QPKVDAESRQIVGMEALVRWVHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQ 761 Query: 566 HPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VNL P + N+ ++ + ++ + LEITE A + ++++ Sbjct: 762 WWDMGLPQVQVAVNLSPRQFQEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTI 821 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +++L G RI+IDDFGTGY++ LK+ +KID FV+D+ + A I+ SI Sbjct: 822 ETVKKLKDLGVRISIDDFGTGYSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSII 881 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AKA +L VVAE VET QQ L Q +QG+ + +P P +D Sbjct: 882 SMAKAMALGVVAEGVETAQQMEFLRGQECQQVQGFFLSKPLPPSD 926 >UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Chroococcales RepID=B7KBH1_CYAP7 Length = 712 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 105/488 (21%), Positives = 185/488 (37%), Gaps = 19/488 (3%) Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE 316 +L +P L S N +Q E+ Y + L + + Y+ + Sbjct: 209 QLDHPILMGLLDQSKNTQGNLLLREVQVEESIY--EQYVHYLPNHQLIRSYLF-DITERK 265 Query: 317 WLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYG 368 ++ QA D LT LPN AL A QE + L +D + ++ G Sbjct: 266 RTEQKLKYQAFHDVLTGLPNRIWFNQQLIAALNNAKRQETPLAILFLDLDGFKNINDTLG 325 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 ++ + LL ++ + + + G E +++L + + Sbjct: 326 HTFGDQVLQKFGKRLLGSVRAGDTVCRWGGDEFVVLLPYISHTEDSIKLAQRILDVLKHP 385 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + + E + LL ++ ++ + Sbjct: 386 FEIQKQQFYIKTSMGISIYPQDGEDGETLLKNADAALYRAKERGRNH-FQFYSTTMTTKA 444 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 + + L N + AL+ +L LY QP E G + +L + G ++P K +PL Sbjct: 445 SLVLRLENLLHRALENQELSLYYQPQVKIKTGEITGIEALLRWTHPELGQVSPHKLIPLA 504 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 Q +L L++ + K +VN Q N+ I ++ + Sbjct: 505 EQTDLIIPIGQWALKTACQQSLDWQKLGIKPLPIAVNFSARQFQQPNLVTLINQVLEETG 564 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++P + LEITE N + + +E+L + G I++DDFGTGY++ L++ +K Sbjct: 565 LAPNLLELEITETTIMQNEDFARQALEELRQMGVHISLDDFGTGYSSLSYLQKFPLTTLK 624 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F + N D I+ +I L L V+AE VET QQ +L +L Q QG+ Sbjct: 625 IDQCFTHSLKDNPQDLAIISAIITLGNHLQLRVIAEGVETLQQLEILQRLHCQEAQGFWF 684 Query: 722 GRPQPLAD 729 RP D Sbjct: 685 SRPLNSED 692 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 94/464 (20%), Positives = 194/464 (41%), Gaps = 18/464 (3%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++V+ + M + + AL D LT +PN Sbjct: 95 RKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVEQLTRLALYDTLTNVPNRYL 154 Query: 340 LEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 LE+ E + L +D + ++ G + ++ + L ++++ + Sbjct: 155 LEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVGDMLLKETAQRLKRMLRKQD 214 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +++L + +M + R +N+ + + + + Sbjct: 215 TIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKRPFCFNHQEIYISTSIGISVYPYDG 274 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ Q+ + + G + L +R AL++G+ LY Sbjct: 275 TDKETLIRMADRAMYQAKKNGRNQ-YALYHAGMHGNGKQLFQLETALRKALERGEFELYY 333 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + K+ + ++ + G ++P F+PL + L ++ + L Sbjct: 334 QPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGLITPISDWIMMQACEHLKQ 393 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + S+N+ P+ Q + ++ + + +++P+ + LE+TE +AE S+ Sbjct: 394 LQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVNPRLIELELTESAVMPHAEQSVE 453 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L G IAIDDFGTG+++ L R DI+KID F K + D+ IV++I Sbjct: 454 RLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKIDRSFTKQLSRYQQDSAIVKAIIM 513 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + + VVAE VET++Q +L K ++QGY + +P +++ Sbjct: 514 MAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSKPLSISE 557 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 108/550 (19%), Positives = 210/550 (38%), Gaps = 28/550 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGK 257 + + + ++ + ++ +L + G+ + L Sbjct: 494 QLEQRLELWAKVFETSSEGIFIVDAQQRILTANWALTRSTGHDLIELMGGDPAELLAGAD 553 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHR 314 R + +L V T + +Y + + + + + Sbjct: 554 ARQTWQSLVERVQTRGSWQGEVRICRRAGGDYPAWLLANAVRDRAGHVSHWVCTSIDITD 613 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRH 366 + RR A D LT LPN L+QA + + +D + ++ Sbjct: 614 RKESERRIRFLAEHDVLTELPNRALCIERLRLALQQARRTGQKVAVLFIDLDRFKNINDS 673 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-ETEGRLQHMVNILN--- 422 G + +RS+ + L+ ++ + + +L G E ++VL+G + E + L Sbjct: 674 LGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVVVLNGLADIEEVAHVVEQRLIPRV 733 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + F + + + L+ Q Q+ A A ++ Sbjct: 734 RQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGA-QFFTAEMN 792 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 + ++++ N +R+A+ QG L L+ QP + G + +L + G + PD+F+ Sbjct: 793 QRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWHSPELGHVPPDRFI 852 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L V+E+ + S+NL L L + + + Sbjct: 853 PVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLSALQLRDPGLLDVLRASLE 912 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 R+ + P + LE+TE ++ + + L + G R++IDDFGTGY++ L R D Sbjct: 913 RHAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLTRFPID 972 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D++ + D I+++I L L VVAE VE + + L G LQG Sbjct: 973 QLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGCDELQG 1032 Query: 719 YLIGRPQPLA 728 Y RP Sbjct: 1033 YHFARPMAAD 1042 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 123/562 (21%), Positives = 209/562 (37%), Gaps = 36/562 (6%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + R E R +LS L++ V + LG + Sbjct: 261 YLRVENQLRDSEARFRSLSDLSSD-WYWEHDAQGRFTQLAGDLSVNGMPLSAVLGRTRWE 319 Query: 260 YPFLNLT---WAVSTLCLL------NYNQNFLQGVETEYSLAFILAVLISFSV---CLLY 307 LN+T WA L + + + + ++ + Sbjct: 320 IGALNMTEADWAAHRAVLAAQQPFRDLELQRRRADGSMHWISVSGVPVQGADGTPRGYRG 379 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDN 359 + R + + A D LT LPN R L + + + +DN Sbjct: 380 VGRDITGRKQAEGQIERLAFYDALTGLPNRRLLLDRLQHATVAVTRSNTQGALLFIDLDN 439 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ---- 415 + ++ G H ++ + L ++E + + + G E +++L+G Sbjct: 440 FKSLNDTLGHDAGDHLLQQAAQRLKACVREVDTVARFGGDEFVVLLAGLSAAAAQASAEA 499 Query: 416 -----HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 H+ L + F + LL Q Q+ A Sbjct: 500 AQVAKHIAASL-GQPYALGGAVHHSTPSIGIALFGPQACRVDELLKQADLAMYQAKAAGR 558 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKY 528 + + + + L +R L Q +L+L+ QP+ + +G G + ++ Sbjct: 559 NTQ-RFFDPEMQAAASHRSALEADLRRGLQQRELVLHYQPMVDGQGRLQGAEALVRWNHP 617 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQ 586 G+M P +F PL Q L VLE+ L + SVN+ Q Sbjct: 618 QRGLMPPAEFTPLAEQTGLILPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQFRQ 677 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + +++ + +P+ + +E+TE ++ + + ++QL G A+DDFGTGY Sbjct: 678 ADFVQQLLATLEASGANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGY 737 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ +LKRL D IKID FV+D+ + D IVRSI LA++ L+VVAE VET+ Q Sbjct: 738 SSLSQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLE 797 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L G Q QGY GRP P Sbjct: 798 FLQHHGCQTFQGYHFGRPMPPE 819 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 84/447 (18%), Positives = 187/447 (41%), Gaps = 19/447 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL---------EQAPEQEAG 349 + + + + + + + DPLT LPN R L + + Sbjct: 493 AGMARNYIASITDLTERKQVEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQQ 552 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D+ + ++ G ++ + + + L++E + + +L G E ++++ Sbjct: 553 FALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITELVREGDTVSRLGGDEFMILMPELH 612 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + ++ + ++ + ++ L + + + ++ LL + Sbjct: 613 KLEQAANLAERILHNIAQPLENDSH-LMITPSVGIAVYPNDGDSFDKLLRNADAAVHFAK 671 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEIL 523 ++ + ++++ + ++R A++ + L+ QP R+ G + ++ Sbjct: 672 RQGRN-NYQFYTAEMNQRASERLQVEISLRKAVENQEFELFYQPQLNLRDGSLAGVEALI 730 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPL 582 + G++ P++F+PL + L + VL + A + SVN+ Sbjct: 731 RWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAAKSTEPFTMSVNVSVR 790 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + + +SP+++++EITE + E ++ + +L + G ++++DDF Sbjct: 791 QFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLLHELKELGVQLSLDDF 849 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID F+ D+ N DA I +I D+A L VAE +E Sbjct: 850 GTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVASHFGLVTVAEGIEKP 909 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L +G QGY +P P D Sbjct: 910 EQAEFLASVGCIEGQGYYYEKPIPAND 936 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 117/605 (19%), Positives = 207/605 (34%), Gaps = 42/605 (6%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA------ 214 + + + ++ VL ML L + Q L A R Sbjct: 482 EQLRSWAAWGTIAVGVLTSAMLGALLLITTGNRRRIQALVEHRTAELQAASVRLHENRAA 541 Query: 215 --------FTLSWL-------AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 SW S L LL D L + I L Sbjct: 542 LIDAQRIARLGSWETLCARDGLHASDELHLLLDSTAGDLN--SLADLIDAIAPASRAALT 599 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 + L + ++ + + + + Sbjct: 600 DALERAATEPGRIMLDCNTDSLPMRT-LQFRIE--GEHVGGRLRRIRGTAQDVTALREAE 656 Query: 320 RRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMM 371 R A DPLT L N A L A + + L +D+ + ++ G Sbjct: 657 ARIRYLARFDPLTGLLNRSAWQDHAQDVLRHAARHDDRCAVLFLDLDDFKTVNDSLGHAA 716 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 + + L ++ + + ++ G E +++LS + + +R + Sbjct: 717 GDRLLAQVACRLGGCVRAEDLVARIGGDEFVILLSRLAHAEEPARVAERVLDALARPLQI 776 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 ++ L +G + + + LL ++ A ++ + T++ Sbjct: 777 DSQPLRVGASIGIALYPADGGEIDTLLKHADTAMYEAKESGRN-AYRFFLPEMTQRVTRR 835 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + +R A++ GDL L+ QP + G + ++ + G++ PD+F+P Q Sbjct: 836 LQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQS 895 Query: 546 NLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL +VN+ L +++ + R+ P Sbjct: 896 GLIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNISALQFRRRDFVATVARVLGETGADP 955 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE + + +QL G +A+DDFGTGY++ LKRL +KID Sbjct: 956 ARIELEITESALMDATPELVASFDQLVALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDR 1015 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV + N DA I + LA+ + VVAE VET+ Q+ L K G + +QGYL RP Sbjct: 1016 SFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRP 1075 Query: 725 QPLAD 729 + + Sbjct: 1076 LGVEE 1080 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 104/472 (22%), Positives = 186/472 (39%), Gaps = 23/472 (4%) Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + L T + ++ ++ + R + H QA DPLT LPN Sbjct: 233 EEELPVNITPLPITWLHHQIVPLGDGIAITARDISERKQKEAELHRQAFYDPLTELPNRT 292 Query: 339 ALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 Q+ + L +D + ++ G ++ +++I R L ++E Sbjct: 293 YFMNRLTKVLERAGRRQDFHYAVFFLDLDRFKVVNDSLGHLLGDEFLKAIARRLSSCLRE 352 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDG 446 + + +L G E ++L + + L S L Sbjct: 353 EDMVARLGGDEFAILLEELSNPDIVHRIAERLQRVLSAPFTLKQHELFTTASIGIALGTS 412 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 E + +L Q+ + ++ + + K+ L + +R A+++ + L Sbjct: 413 YYEQPEAILRDADIAMYQAKTQGKARHI-IFDQAMHTRAVKRWQLESDLRWAIERREFCL 471 Query: 507 YAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 QPI + + G++ ++ G ++P +F+ + + L VL + L Sbjct: 472 VYQPIVSIQTERLIGFEALVRWHHPQRGWISPAEFISVAEETGLIIPLGHWVLWEGCRQL 531 Query: 564 ATHPCDK-------KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 SVNL Q ++ I ++ ++ + + LE+TE Sbjct: 532 RQWQSQFNLSPTAEPPLTVSVNLSSKQFCQPDLIHYIQQVLQQTGMEGTCLKLELTESIL 591 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N ++ + QL + G ++A+DDFGTGY++ L R D++KID F+ I T + Sbjct: 592 MENLSTATSLLVQLKELGIQLALDDFGTGYSSLSYLHRFPLDVLKIDRSFINGIEAETEN 651 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IVR+I LA++ +L VVAE VETQ Q L L Y QGYLI RP Sbjct: 652 LEIVRTILSLARSLNLQVVAEGVETQAQLDHLQALQCGYAQGYLISRPLTPE 703 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 95/465 (20%), Positives = 180/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + + QA D LT LPN Sbjct: 412 RRNGEVYPEWLSISAIPGPTGRTEYYVAVFHDITELKAKESQIQHQAHHDALTGLPNRAL 471 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L ++ + + +DN + ++ G M+ ++ + +++ + Sbjct: 472 LRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVRPQD 531 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 L ++ G E ++VL E E + L +R + L +G F + Sbjct: 532 TLARVGGDEFVVVLQDVEGERDAAQVAERLLARFTDPVRVQEHELFVGASVGIALFPDDG 591 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ ++ ++ + +++ L + AL GD+ + Sbjct: 592 DDPDTLVRNADIAMSRAKEQGKRR-YHLFTPAMNDRAVRRLSLEGDLHRALAAGDITAHY 650 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + + ++ DG P +F+PL L +L Sbjct: 651 QPRVDLNTGLITGMEALARWIRADGSQEHPAEFIPLAESTGLIVPLGEHMLRLACAKTRA 710 Query: 566 HPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL +N+ G + + + P + LEITE ++ + ++ Sbjct: 711 LCDAGHADLHVAVNLSVHQFRHRNLVGMVADVLAETGLPPHLLELEITESTIVTDVDHTI 770 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + QL + G +++DDFGTGY++ +LK L +KID F++DI + DA I +I Sbjct: 771 RKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRDIPDDPNDAAIAATII 830 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VVAE VET +Q L G +QG+L RP P + Sbjct: 831 TMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDE 875 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 114/488 (23%), Positives = 200/488 (40%), Gaps = 22/488 (4%) Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNF-LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 P +N V + Q L E L+ + A + L + Sbjct: 588 YFGIPLVNSEQKVVGVLNGFSRQRMHLPPDAREI-LSIVAARAATELERLKADEALAEHR 646 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHY 367 + + A DPLT LPN + E S + +D + ++ Sbjct: 647 K----QLSYLAFHDPLTQLPNRLRFTEVLEAAVGDAEGHGRYLSLLFIDLDRFKNINDSL 702 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G + ++++ R L+ + L +L G E ++L T + S+ Sbjct: 703 GHSIGDKLLQAVARRTGSLIDSADVLARLGGDEFAILLFNCVTPVVGADTAQRVIDALSQ 762 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 ++ L + + L+ ++ E ++ + Sbjct: 763 PFQIDDYSLHVSASIGITVAPVDAREPDELIKCADIAMFKAKDAGRN-TYKFYERSMNLK 821 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 T + +LL N +R AL + L LY QP + + G++ +L + G+++P +F+PL Sbjct: 822 THELLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPL 881 Query: 542 IAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L +L S + + T + R +VN+ ++ + ++ ++ Sbjct: 882 AEETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQT 941 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + + LEITE + +SS+ + +L K G R+AIDDFGTGY++ LK+ + Sbjct: 942 GVPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSL 1001 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV D++T+ DA I S LA L VVAE +E Q+Q L + G Q+ QGYL Sbjct: 1002 KIDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYL 1061 Query: 721 IGRPQPLA 728 I RP P+A Sbjct: 1062 ISRPLPVA 1069 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 119/645 (18%), Positives = 224/645 (34%), Gaps = 45/645 (6%) Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 + Q W + I + G +F L + DA + + T + Sbjct: 130 ERMLQSGLWYLASSIALIGLFASITGLYFTRRLNAISKVADA--------VQAGDTGRRV 181 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 R+ + ++ + + + ++ + + Sbjct: 182 DIKGSDEAARLAQEFNAMLDTLQQREQELVQSRDALRIAATAFESNDVMFVCDADWRILQ 241 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPF-----------LNLTWAVSTLCLLNYNQNFLQGVET 287 + V + +GK + ++ + + Sbjct: 242 VNSAFQRVTGYLPEEAIGKAPRDLMGSGIQTQEFYEVMNESIRSNGSWQGEVWDRRKNGE 301 Query: 288 EYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 Y + + S S + + + + D LT+LPN R L Sbjct: 302 TYPAWTTITAVRSESGDVTHYVANLSDFSARKAAENEIKTLVYFDSLTMLPNRRMLMGRL 361 Query: 345 EQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 E + + +D+ + ++ G ++ + L ++E + + +L Sbjct: 362 ETAMHAALSTGHLGALLFVDLDDFKTLNDTLGHHQGDILLQQVANRLQSCVREADTVARL 421 Query: 397 PGSELLLVLSGP---------ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 G E +++L G + E ++ LN + F Sbjct: 422 GGDEFVVMLEGLSKDVAEASTQAEAVAGKVMQALN-QPYDLGTLTRSSTPSVGITVFGKQ 480 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 QE+L L + Q+ A + + T + L +RTAL++ +LY Sbjct: 481 QESLDEPLKRADLAMYQAKAAGRNTS-RLFDPKTQAAVTLRADLEAALRTALEEEQFVLY 539 Query: 508 AQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ G++ P +F+ + + VL + K LA Sbjct: 540 LQPQISEDVRVTGAEALIRWQHPTRGLVMPGEFIAVAEDCGMIVPIGNWVLNTACKQLAL 599 Query: 566 HPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ Q + +++ R+ + +EITE +N + Sbjct: 600 WATQPAFAHMTIAVNVSAKQFHQHDFVEQVLDALSRHGAQASGLKIEITESMLIANVDDV 659 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + +E+L G A+DDFGTGY++ LKRL D++KID FV+D++ +T DA I I Sbjct: 660 IVRMEELQHHGVGFAMDDFGTGYSSLTYLKRLPLDVLKIDQSFVRDVLVDTNDAAIANMI 719 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + LSV+AE VET +Q L + G QGYL RP P+ Sbjct: 720 VALANSMGLSVIAEGVETVEQMQYLARHGCHAYQGYLFSRPVPVE 764 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 105/556 (18%), Positives = 211/556 (37%), Gaps = 25/556 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--LCTPYENDFIAGYLVPVFFIIFTLG 254 ++ + E + +L + + V ++ + I I ++ Sbjct: 372 ITTKKQAENALIEAESKYRSLVEKSIVGVYIIQKNIILYANPYLIDMLGYKEAIIGMSIW 431 Query: 255 VGKLRYPFLNLTWAVSTL----CLLNYNQNFLQGVETEYSLAFIL-AVLISFSVCLLYMV 309 + + + L + + L + ++ S ++ + Sbjct: 432 DIVYPDDYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIMYQGSPAVIGTI 491 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLE 361 + A D LT LPN R E+ E + L +D + Sbjct: 492 LDVTERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMYLDMDRFK 551 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 +++ G + + + + L ++E + ++ G E ++L + + Sbjct: 552 YINDSLGHAVGDQLLIAFSKRLQEQIRETDFAARMGGDEFTVILPHIRDNNSAIEVARRI 611 Query: 422 NSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 R + + L + + + + L+ ++ Sbjct: 612 IERTREPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKN-GYQIFT 670 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 ++ QT K L +R A+ + +L +Y QP N E G + ++ + G+++P Sbjct: 671 SSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWNHPEWGLVSP 730 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRII 594 ++F+P+ + L V ++ + K S+N+ L K+ I Sbjct: 731 NEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLSKDFMDAIQ 790 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++ + P + +EITE NAE+ M+ ++ L+K G I++DDFGTGY++ LKR Sbjct: 791 QILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTGYSSLSYLKR 850 Query: 655 LQ--ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + +I+KID F+ D+ + D I+ +I LA+ ++SVVAE VET +Q +L L Sbjct: 851 FKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQLHILKLLK 910 Query: 713 VQYLQGYLIGRPQPLA 728 +QGYL RP Sbjct: 911 CDLVQGYLFSRPVQAE 926 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 98/465 (21%), Positives = 182/465 (39%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISFS-----VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + + Y ++ + + + R R A DPLT LPN Sbjct: 508 RKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDISLQREAQERIQRLAHFDPLTDLPNR 567 Query: 338 RALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L + ++ + L +D+ + ++ G + + ++ R L L+ Sbjct: 568 VLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGP 627 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E LL+L + +L ++ + L + Sbjct: 628 QDTVSRLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPAD 687 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E+ L + + + +T + + + N +R AL++ L+ Sbjct: 688 GESFDTLYQRADAAMYSAKQSGRNR-YGFFTADLQARTARALQIENALRRALERQQFELH 746 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + + G + +L + G++ P +F+P+ VL + + Sbjct: 747 YQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAK 806 Query: 565 THPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + R SVNL + + + R ++ + + + LE+TE A + ++ Sbjct: 807 RWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAA 866 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++QLH G R+++DDFGTGY++ LKR Q +KID FV+D+ + D IV +I Sbjct: 867 LAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAI 926 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+A + AE VET Q L G QGYL RP P Sbjct: 927 IRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPAD 971 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 95/446 (21%), Positives = 178/446 (39%), Gaps = 17/446 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKS 351 + + + + + R AL DPLT LPN AL+ A + Sbjct: 627 GEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVA 686 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ +G + + L ++E++ + +L G E ++L + Sbjct: 687 LLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSP 746 Query: 412 GRLQHMVNIL---NSRQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + +N + +G + + T + L+ Q ++ Sbjct: 747 DDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKH 806 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 E + + ++ L + A+ + ++ QP + + G + +L Sbjct: 807 DGRD-GYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLR 865 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLT 583 + G++ P +F+ + + L VL + +VNL PL Sbjct: 866 WDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQ 925 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L ++ I + + LE+TE E ++ ++ L + G RIAIDDFG Sbjct: 926 LHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFG 985 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+ D++KID FV+DI D I +I + + L+V+AE VET+ Sbjct: 986 TGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKA 1045 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + G Y QGYL P P + Sbjct: 1046 QLEFLEQQGCDYYQGYLYSMPLPAEE 1071 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 98/476 (20%), Positives = 187/476 (39%), Gaps = 26/476 (5%) Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNR-------RWHLQALT 328 QN+ S+ +L + + + R + + Sbjct: 220 QNYQDENGENVSVEKTATLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHY 279 Query: 329 DPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LP + + L +D + ++ G + ++ + Sbjct: 280 DTLTGLPQRDFFFDLLHSHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVA 339 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGY 437 + L ++ + L ++ G E L+ L + + + + S + + + Sbjct: 340 QRLQNNIRITDNLSRMSGDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTA 399 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F G+ + + LL ++ A + ++ + + L +R Sbjct: 400 SIGISLFPGDATSPEKLLSCADSAMYRAKESGRD-AFRFYKPHMNEKAQGLLWLETELRL 458 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A++Q L L+ QP + + G + ++ + G++ P +F+P + +L Sbjct: 459 AIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEW 518 Query: 555 VLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + + +A R +VN+ + + ++A + +L Y + + LEITE Sbjct: 519 VLNTACRQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITE 578 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + E++ + +L G +++IDDFGTGY++ LKR +KID F+ D+ N Sbjct: 579 SVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFINDVTIN 638 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA I SI LA + V+AE VET +Q + L + QY QGYL RP P D Sbjct: 639 EQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKD 694 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 110/505 (21%), Positives = 195/505 (38%), Gaps = 26/505 (5%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCL 305 F ++ + + + Y + + Sbjct: 395 PRLLSSGRHDAAFFRDMWETIHRVGGWQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHY 454 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + + A D LT LPN L + + + + Sbjct: 455 VGTHYDITERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDL 514 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--------- 408 DN + ++ G + + LL ++E + + ++ G E ++VLS Sbjct: 515 DNFKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAAS 574 Query: 409 ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 ETEG + ++ L SR + T F G++ ++ LL Q +S Sbjct: 575 ETEGAAEKVLTAL-SRPYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDLAMYKSKES 633 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARL 526 A+ + + ++ L +R A+D+ LL++ Q G + ++ Sbjct: 634 GRN-AICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEALVRWQ 692 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTL 584 G++ P +F+PL + L +VL++ + LA D+ +VN+ L Sbjct: 693 HPQHGLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQL 752 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + ++ R P + LE+TE N E + + L G ++DDFG Sbjct: 753 RENSFVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGV 812 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL +KID FV+D++ + DA+I R+I LA++ L V+AE VETQ Q Sbjct: 813 GYSSLSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQ 872 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L G QGYL RP P+ D Sbjct: 873 RQFLADAGCHAYQGYLFCRPLPIED 897 >UniRef50_A3JAM8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAM8_9ALTE Length = 756 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 107/474 (22%), Positives = 203/474 (42%), Gaps = 22/474 (4%) Query: 277 YNQNFLQGVETEYSLAFILAVLIS-FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + + T + + + + + + +VR + + A DPLT LP Sbjct: 274 HELDAINKYGTVFPIEIGMTQMPPLGDIDFVVIVRDITQRKKREDEIRQLAYYDPLTRLP 333 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R L+ Q + L +DN + ++ G + + L+ + Sbjct: 334 NRRLLKDRLQQVIANCGRQSRYAALFFLDLDNFKNLNDSLGRTKGDLLLCQVAARLIESV 393 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHM--------VNILNSRQIHWNNTGLDMGYGA 439 + + + +L G E ++++ G ++ + +N+ +++ + + + Sbjct: 394 RHGDTVSRLGGDEFVVLIEGLSSDRNEAAVQVEAAAGKINVQLTQKFDLDGSPYNGSASI 453 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F+ N +L+ LL Q ++ A H ++ + + + + + + AL Sbjct: 454 GVTTFNSNDSSLEDLLKQADMALYKAKAADH-SSVHFFDPQMQVVASLRAAMQQDLYEAL 512 Query: 500 DQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + L+ Q ++ G + +L G ++P +F+PL + L VL Sbjct: 513 RKNQFQLHYQKQIDQHEGLIGVEALLRWAHPTKGFISPAQFIPLAEETGLIVPIGEWVLR 572 Query: 558 SLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + LA D K +VN+ + +K+I ++ P + LEITE Sbjct: 573 EACQTLAQWASDPAKANLTIAVNISVVQFNKKDIVHTVLNALNASGAKPHNLKLEITESL 632 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 S+ E+ + +L + G +IDDFGTGY++ LK+L +KID FV+DI+ + Sbjct: 633 LASDVENVKVKMLELQRHGVTFSIDDFGTGYSSLFYLKQLPLHQLKIDQSFVRDIINSPN 692 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D I +++ LA A L+V+AE VET+ Q+A+L LG QGYL G+P L D Sbjct: 693 DQAIAQAVITLAIAMHLNVIAEGVETEAQRAMLQDLGCGAYQGYLFGKPCALQD 746 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 115/600 (19%), Positives = 216/600 (36%), Gaps = 35/600 (5%) Query: 164 FTVVDLLSLFTAVLIYNM-------LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 + + + + A+ I L + + I +R E Sbjct: 462 YPLCEGERVLGALTIGAARPGDLDQAGTALLKELAEDLAFGIATQRTAVARREAEVALRL 521 Query: 217 ---LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 ++ VL+ L + + P L + + Sbjct: 522 RERAIESSSDGVLIFALGDDGPRIRDVNPAAERILGMARALLVDAPAPALTVFAPGALAE 581 Query: 274 LL---------NYNQNFLQGVETEYSLAFILAVLIS-FSVCLLYMVRIYHRSEWLNRRWH 323 L + + + + LA + + ++ +V+ R Sbjct: 582 LGVALVCGRETHLEVEGERADGSPFWCECALAPVRAAGDAHVVCVVKDVTERVLYLRELE 641 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 QA D LT LPN L+ E + +D+ + ++ + G Sbjct: 642 RQAKYDGLTGLPNRYLLDDRLEQAIVAARRHERLLGVAFIDLDHFKVVNDNVGHRQGDEL 701 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 +R L ++++ + + G E +++L E ++ L + ++ Sbjct: 702 LRQAASRLAAVLRDGDTAARQGGDEFVVLLPDLGDERDAFRILGRLQAALAEPFRLDDRS 761 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + LL Q+ A + ++ Q ++ L Sbjct: 762 FFVTCSIGVSLYPRDGGDGDTLLKHADIAMYQAKAAGRNVV-RFFTAEMNIQVRDRLQLE 820 Query: 493 NTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R+AL+ G+L L QP + + G + +L + G + P +F+PL + L Sbjct: 821 GALRSALENGELHLAFQPQVDGGSGQVIGAEALLRWQHPELGAVPPVRFIPLAEETGLIG 880 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + + + R +VN+ ++ RI + + P + L Sbjct: 881 PIGEWVLRAACRQARQWEQAGRRLRIAVNVSARQFRSPDLPARIAEILDETGLPPALLEL 940 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE +AE + + +L + G +A+DDFGTGY+++ L+R D +KID FV+ Sbjct: 941 ELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGTGYSSFAYLQRFPIDTLKIDQSFVRS 1000 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V IV +I LA + + V+AE VET QQ L + G LQGYL GRP P A+ Sbjct: 1001 MVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAE 1060 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 112/595 (18%), Positives = 216/595 (36%), Gaps = 36/595 (6%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 PL+ A+ V+ + F L + P + + Sbjct: 115 LPLERLGASPSPAAVLAAVETIRKTAEKKSAVPGFDCLVQ----PVYFDYERVGTVVIHA 170 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 E L W A +++L +L+ F A + P L+L + Sbjct: 171 DTELFRKNLRWTATVTLLFMLVTVIAAYFFSAKLQQM------------ISRPLLDLLSS 218 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + ++N+ V L + F+ L + A Sbjct: 219 MKDVS---ASKNYAIRVAKPSDDEIGL-LYDGFNEMLSEIEERNQILRQRQAHLQQLAHY 274 Query: 329 DPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN S + +D+ + ++ G + + Sbjct: 275 DPLTRLPNRTLFYDRLAQALNQAERNRQALSVIFIDLDHFKDINDTLGHRTGDLLLIDVA 334 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 L +++ + + +L G E + + LN+ + + + + Sbjct: 335 NRLSTVVRSCDTVARLGGDEFTVFTQNVMNADNAAIVAAKLNALFAKPFQLGESEIYVTA 394 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F + +T+ LL + A + + ++ ++V LL+ +R Sbjct: 395 SIGVTLFPNDGKTVDELLMNADIAMYHAKACGKNV-YKMFDRKMNEHANERVTLLSDLRL 453 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ + +L+ QP + + ++ + G++ PDKF+ L + Sbjct: 454 ALEREEFVLHYQPKVDLLTGNVTSVEALVRWMHPRLGMLAPDKFIRLSEESGFIVELTDW 513 Query: 555 VLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + G R +VNL P ++++ I + + P + +EITE Sbjct: 514 VLRTACTQAKKWQEQNLGSVRVAVNLSPYHFQRQDVKEAIFSVLDATGLEPALLEIEITE 573 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N E + +L + G I++DDFGTGY++ L R + +KID F+ +++ + Sbjct: 574 SALMQNDEYTCALFRELRELGMTISVDDFGTGYSSLSYLHRFPINTLKIDRTFILNMMKS 633 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + D IV +I +AK+ ++ +VAE VET Q L G +QG+L+ RP Sbjct: 634 SEDQAIVTAIIAMAKSLNMQIVAEGVETVDQLEKLKDQGCHEIQGFLVSRPVAAE 688 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 95/469 (20%), Positives = 182/469 (38%), Gaps = 25/469 (5%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y+ + ++ + + + H A D LT LPN R Sbjct: 231 RKSGQIYAELLTITAIVASGGITTHYVASFSDITEDKQAEAEIHRLAYYDALTRLPNRRL 290 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + + +DN + ++ G + + + + L ++E + Sbjct: 291 LQDRLGQALAAAARHGLYGALFFIGLDNFKTLNDTRGHDVGDLLLVEVAQCLRAQVREGD 350 Query: 392 KLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 + +L G E +L+L G E + + + L SR + Sbjct: 351 TVARLGGDEFVLLLDGVSGNADEAAAVAKEVGDKLREATSRPFSLDGQEYRCKLSIGVSL 410 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F +T++ L + Q+ L + + + L + + AL Sbjct: 411 F-AALDTVEELFKRADLALYQAKNAGRDR-LRFFDPAMQAAMDLRGALESDLHQALALDQ 468 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L L+ QP + G + +L G+++P++F+PL L +LE+ Sbjct: 469 LRLHYQPQIDTAGRVIGVEALLRWWHPQRGLVSPNEFVPLAESTGLILPIGRWILETSCV 528 Query: 562 WLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + D + + +VN+ Q + ++ R K +P + LE+TE N Sbjct: 529 LIKNWESDACTRSLQVAVNVSARQFRQADFVEQVKRSLKASGANPARLKLELTESVLLKN 588 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 E ++ + + + G ++DDFGTGY++ L +L D +KID FV+ + + I Sbjct: 589 VEDTIAKMLAIKRLGVAFSLDDFGTGYSSLSYLAQLPLDQLKIDQSFVRKLPGARKEETI 648 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 R+I + + ++V+AE VE++ Q+ L G QGYL RP P+ Sbjct: 649 ARTIITMGRELDMNVIAEGVESEAQRQFLEAHGCHAFQGYLFSRPLPVE 697 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 99/465 (21%), Positives = 186/465 (40%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + L ++ + + + + + + + A DPLT LPN Sbjct: 623 RKDNHIIPLICSISAVRNDKQQLTHYVSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTL 682 Query: 340 LE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L A + L +D + ++ +G + ++ + R L ++ ++ Sbjct: 683 LTINLSHAIDLAVRNHHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISD 742 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW-NNTGLDMGYGAAWGRFDGN 447 + +L G E +++ G ++H + N + +G + + Sbjct: 743 TICRLGGDEFTVLIEGNPALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEH 802 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 +T + LL Q ++ AH + ++ +++ L ++ AL +L LY Sbjct: 803 GQTPKELLQQADAAMYRAKAHGR-SCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLY 861 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ G+++P +F+P+ + L + VL + Sbjct: 862 FQPQIDISSNRIIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGK 921 Query: 565 THPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ P+ NI + K+ + LE+TE ++ + Sbjct: 922 EWQQKGLPAINLAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEA 981 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L K+G R+AIDDFGTGY++ LKR D++KID FV DI D I +I Sbjct: 982 VEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAI 1041 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A L V+AE VET++Q L + G QGYL+ P P Sbjct: 1042 VAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVPAD 1086 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 99/446 (22%), Positives = 188/446 (42%), Gaps = 23/446 (5%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 L ++V L + H A D LT LPN R L + L Sbjct: 469 LFFIVHDITERRHLEEKMHDLAFYDLLTKLPNRRLLLDRLEKALLSGTRSRHHSALMFLD 528 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETE 411 +D+ + ++ +G + + + +L ++E + + G E ++++ + Sbjct: 529 LDHFKVLNDLHGHDIGDQLLVEVANRILGCIREQDSAARFGGDEFVVMIEDLSENLSDAV 588 Query: 412 GRLQHMVNIL---NSRQIHWNNTG----LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + F ++E L+ LL Sbjct: 589 NQADSVAEKIRCALAAPYLLKRGEEVISHHCSSSIGVTLFRDHEENLEQLLKWTDMAMYH 648 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEI 522 + + + + ++ + L N + TAL++ L+ Q + EG + + Sbjct: 649 AKDAGRNV-IRFFDPVMQTAIENRAALENDLHTALEERQFELFYQIQVDRDGRAEGAEVL 707 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 L G+++P +F+PL L VL+++ +A +++ +VN+ Sbjct: 708 LRWRHPQRGLVSPAQFIPLAEDTGLIVPIGEWVLDTVCAQIAKWQGEQRNLVIAVNVSAK 767 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q N + ++ +R+ +SP + LE+TE N + ++ ++ L FG ++DDF Sbjct: 768 QFRQSNFVELVQQIIQRHQVSPALLKLELTESLVLDNIQDTIDKMKVLKAFGVSFSMDDF 827 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+L D IKID FV+DI T+ D ++V++I DL + V+AE VE++ Sbjct: 828 GTGYSSLSYLKQLPLDQIKIDQSFVRDIATDKTDLVMVKTIVDLGVNFEMDVIAEGVESE 887 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q LL + G QGYL +P P+ Sbjct: 888 VQLGLLKQCGCSRFQGYLFSKPVPVE 913 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 105/501 (20%), Positives = 197/501 (39%), Gaps = 29/501 (5%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMV 309 G G+ R + + S +Y + + + + +L +V Sbjct: 511 DLTGRGQWRALWEQIKVLNSMTIEGHYKT----RSGRTFPVEVSVNYFVYGGREYVLSLV 566 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 R + + + A D LT LPN R L + L +D + Sbjct: 567 RDVTERKEVEAQIRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTREYGALMILDLDRFK 626 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQH 416 ++ G + + + R L +++N+ + +L G E ++VL G ++ + Sbjct: 627 TLNDTQGHDVGDRLLIDVARRLTASVRQNDTVCRLGGDEFVVVLEGFGSDEDQAVTQAEA 686 Query: 417 MVNILNS---RQIHW--NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + N + F G+ T LL Q Q+ Sbjct: 687 IAEKVRAALNQPYSLSGNGSRFHSTTSVGLTLFCGHDATADMLLKQADVALYQAKDAGRN 746 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYD 529 L + ++ + +R AL++ + +Y QP ++ G + +L Sbjct: 747 LV-RFFNPAMQAAIDTRMAMEAALRQALERDEFHVYYQPQVDQRERVIGAEALLRWRPQG 805 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQK 587 ++P +F+PL + L VL+ L D + + +VN+ + Sbjct: 806 NEAISPLEFIPLAEETGLILPIGKWVLDVACAQLKAWESDPRAAHLKIAVNVSARQFHEP 865 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + R + P + LE+TE E+ + +E+L+ G +DDFGTGY+ Sbjct: 866 DFVATVQDSLARSGVDPTRLQLELTESVVLEKIETVVSRMEELNALGVSFCLDDFGTGYS 925 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL D +KID FV+D+V ++ DA IV++I ++++ L+V+AE VET Q+ Sbjct: 926 SLSYLKRLPLDQVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIAEGVETHAQRDF 985 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L QG+L P P+ Sbjct: 986 LAGK-CLGYQGFLFCEPIPIE 1005 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 98/349 (28%), Gaps = 43/349 (12%) Query: 33 PLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGS 92 P ++I ++ I L P + F W + +L + +W ++ + + Sbjct: 176 PASLIAAASIGLVAEPT-----LRLRFSWSYWLFLLSLVGSATVWMIWNTWALRGETVAN 230 Query: 93 QTF-VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 V A+ W+ G + W+R W + + ++ L GS Sbjct: 231 IRVDAVFSLTALGMGVATLYWQVGASPNLHWER--WSQAIVRVLPLATVVLAGSAVVLLG 288 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 + + T+ L + A+L ML ++ + + R+ Sbjct: 289 DRTDVSATSRTAVTIASLTVIVLAMLRQGMLLREHAQLKIVTRNLEESERQKNLILHTLP 348 Query: 212 KRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV-----FFIIFTLGVGKLRYPFLNLT 266 L WL + + +C P F + F I+ K R Sbjct: 349 D----LVWL-KDADGVYQMCNPAFERFTGRTEAEMRGKTDFDIVGPELARKFRNEDAQAM 403 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 A L ++ Q S+ L + +L + R + + + Sbjct: 404 LADHPLTSMHALQAVDGRDVQIESVKTTLRDRDRRVLGILGIARDVTERQRASEQLA--- 460 Query: 327 LTDPLTLLPNFRALEQAPEQEAGKSFCCLRID---NLEFMSR----HYG 368 L NF A + D +++ G Sbjct: 461 -------LVNF-----ALNHVKEAALLA---DENAQFHYVNDEACRSLG 494 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 116/740 (15%), Positives = 227/740 (30%), Gaps = 41/740 (5%) Query: 29 RFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPV----LCGMFCTNLWNFHLSFL 84 R P I + +L + + L G P + L +L Sbjct: 188 RRFEPFDWIIGAGEYLYQIEADLQAEALKRIGAISFHPDGVIGVTTADGRILVEPNLLAQ 247 Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYG-----LTSRYVWQRLFWLGLVTPIGIKCS 139 +A G + A R + QR + Sbjct: 248 PSARHAGLPEQPAVPWTAAAREVIQRNGGGRLQFSLPGPDGRAQRRLGYAVEHAGWQWYL 307 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + VG + ++ L AV + L Sbjct: 308 VASVGLDGLDAALEHERDEVRNTARHRLEFTLLLLAVASTVAVIVSLAFSSWIGRRFASY 367 Query: 200 WRRDIAPSLGKEKRAFTL------SWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF 248 + E + L ++++L + +AG Sbjct: 368 RGEIAQRNAALEAKNRELQLAARVFECGNEAMMVLDADHRFITVNSACAQLAGLDAAALR 427 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSV 303 L + + ++ + + ++ + + Sbjct: 428 GRPAAQLLNDHDGAGWERIARELAEQGAWSGEVTVRREDGPTLPAQLSVSAVLNSAGGAT 487 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 + + + A D LT LPN L + + Sbjct: 488 HYVGALTDMSAHKQTEALLRHMAEYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFI 547 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + +R + L L+ + + + G E +++L+ Sbjct: 548 DLDRFKNVNDSLGHSVGDALLRQAAKRLASLLHGGDTIARPGGDEFVMLLAEITDRAVAA 607 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + L + + LL + Sbjct: 608 NRAAQIIDAFSTPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRN- 666 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + +S + +++ L N +R A+ + + ++ QP + G + ++ + Sbjct: 667 TYRFFTDEMSLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPE 726 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G++ P++F+PL L +VLE+ +VN P+ + N Sbjct: 727 RGLIAPERFIPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGN 786 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 A + + + + + +E+TE ++A + L G R+AIDDFGTGY++ Sbjct: 787 FAETVAEVLAETGLPARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSS 846 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR Q D +KID F+ D+ + DA I +I +A++ +SV+AE VET Q+ L Sbjct: 847 LAYLKRFQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFL 906 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 G QGYL P P+ Sbjct: 907 VDQGCAEGQGYLFSPPVPVE 926 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 114/565 (20%), Positives = 214/565 (37%), Gaps = 33/565 (5%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII----- 250 A +L RDIA E++ L S +++ E D Y+ P F I Sbjct: 351 ADLLSLRDIAERKASEQQLRLLKESLEASFNGVVIVDAIEPDMPVIYVNPAFERITGYSE 410 Query: 251 ---------FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 G + + +S ++ + + ++ + Sbjct: 411 AEMLGRNCRILQGNERDSLQIEEIHRGLSQAENVHVVIRNFRKDGQPFWNDLYISPIFNA 470 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGK 350 + + + A D LT LPN LE Q Sbjct: 471 QGNVTHFIGVQNDITEQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKMALRQKHSL 530 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G + + + + ++ + + ++ G E +++L + Sbjct: 531 AILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIILLVDLKL 590 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E + + + L + R H L + DG+ E L+ Q ++ Sbjct: 591 ENDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLAMYKAKQ 650 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 ++ + ++V L N ++ A++ LY QP + + G + +L Sbjct: 651 EGRN-NYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQVIGLEALLR 709 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT 583 G ++P F+P+ VLE+ + L P +VN+ + Sbjct: 710 WQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPSVAVNISTVQ 769 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + N + ++Y + + + +EITE F N E ++ +++L + G I+IDDFG Sbjct: 770 FRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNISIDDFG 829 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TG+++ LK L D +KID FV++I T++ DA I + I +A L+VVAE VET+Q Sbjct: 830 TGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEGVETEQ 889 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q L + QGY +P P Sbjct: 890 QFKFLQQSNCDQYQGYYFAKPMPFE 914 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 100/469 (21%), Positives = 179/469 (38%), Gaps = 29/469 (6%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 Y E E L + A L ++ + R A D LT LPN Sbjct: 305 YAHEVATPCEQEQELIAMAAHLAGIAI----------ERKRAEDRISFLAHHDALTGLPN 354 Query: 337 FRALEQA-------PEQEAGKSFC-CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 E+ + + L +DN + ++ G ++++ + ++ Sbjct: 355 RVLFEEQVDGMLEEIRERDQCAVLAFLDLDNFKLINDSLGHAAGDELLKAVAGRMRASVR 414 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRL-----QHMVNILNSRQIHWNNTGLDMGYGAAWGR 443 + + + ++ G E +++L+G E + + + + + + + L + Sbjct: 415 KADFVVRVGGDEFIILLNGLPKERDIVLSRLEDIRSAI-AMPLQLQGRSLQVSCSMGVAC 473 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F T LL ++ + E ++ + +++ +R AL + Sbjct: 474 FPNQGRTAGELLANADMAMYRAKELGRD-NIQVFTEEMAARAHERLQWQEELREALAGEE 532 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LL+ QP N + +L GI++P F+PL + L L + Sbjct: 533 FLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRAAC 592 Query: 561 KWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + L SVN+ ++N A R+ + K + + + LE+TE + Sbjct: 593 RQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKETGLEARYLELELTESLIMQD 652 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 ++ + L G +AIDDFGTGY++ LKR +KID FV DI + D I Sbjct: 653 VPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAI 712 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I LA+ L V+AE VE++ Q L K G +QGY RP Sbjct: 713 TSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAE 761 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 93/484 (19%), Positives = 184/484 (38%), Gaps = 20/484 (4%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA-FILAVLISFSVCLLYMVRIYHRSEWLN 319 PF + + + + + G S+ L +++ V + + Sbjct: 212 PFQQVMVTGQPVFDVQHAIEWADGTRKYLSVNGAPLKDADGVITHIVFSVTDISHHKHVE 271 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLM 370 + AL D LT LPN + + L +D + ++ G Sbjct: 272 EQLCHDALHDNLTRLPNRTLFMERVNHAIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHD 331 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH 427 + + + R L ++ + + L G E ++L + + + + + Sbjct: 332 VGDQLLTATARQLEKCVRTTDTVAHLSGDEFTILLEDIKDIKDATRVAERIQATLKAPFN 391 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 NN + E + +L ++ + ++++ + + Sbjct: 392 LNNHEVFTSASIGIALSSTGYERSEDILRDADIAMYRAKELGKAR-HEIFDKIMHARALE 450 Query: 488 QVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L N +R AL++ + +Y QPI G++ ++ + G+++P +F+P+ Sbjct: 451 LLRLENDLRRALERQEFEVYYQPITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAED 510 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L VL + L + SVNL + + ++ +I + Sbjct: 511 TGLIIPLGEWVLHEACRQLRMWHTQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETG 570 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + LEITE NAE+ + QL ++++DDFGTGY++ L R + +K Sbjct: 571 LDGSFLKLEITESILMENAETVTKMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLK 630 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV + + I+R+I LA + + V+AE VET +Q L L + QGYL Sbjct: 631 IDRSFVSKMNPKNRNTEIIRTIITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLF 690 Query: 722 GRPQ 725 +P Sbjct: 691 SKPL 694 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 111/695 (15%), Positives = 233/695 (33%), Gaps = 32/695 (4%) Query: 56 LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG 115 L + G V G+ S+ + A T V + I R Sbjct: 57 LHVLGVALVATAAIGIGIAVWLLPWGSWSRRA----PLTLVPVAFTLIAIHNYFARDEPA 112 Query: 116 LTSRYVWQRLFWLGLVTP--IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 + W+GL P + ++ ++ PL ++ V Sbjct: 113 RFGLFFIVTFTWIGLACPRWTSLPFVPLMIVAYVT-PLVVTGTSIATALSAAVCTAPVCV 171 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 + L S +++ +R + + +S + + Sbjct: 172 LVAEAIAWVGARLRVAQRSLRESEVRFRSLVQHASDVVAVLGPDGTARYVSPAIQHVLGY 231 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 D I + + A+ + + + + Sbjct: 232 RPEDLIGTSVFDRIHPDDLPHARAQLTEIVLGRGAMPPT-----QFRYRRADGSWVYVEA 286 Query: 294 ILAVLISF--SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 L+ ++ R + + QA DPLT LPN L++ Sbjct: 287 TATNLLDNPAVGGIVINARDISERKRFEKELVHQAYHDPLTGLPNRVFLQRRLADSLAQA 346 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + + +DN + ++ G + + + LL ++ + + G E ++ Sbjct: 347 ARERTRVALLFIDLDNFKLINDSLGHDAGDRVLSELGKRLLGCIRCGDMAARFGGDEFMV 406 Query: 404 VL---SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 ++ G + + + + L + + + L+ Sbjct: 407 LINGTPGTDAALAAADRLAATLAEPFVVDGHELVITTSIGVALGGDPDDRPEDLIRNADA 466 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG-- 518 ++ + + + Q +++ L +R L++G+ +Y QP+ + Sbjct: 467 AMHRAKLLGKARRV-VFDPAMYAQAVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPV 525 Query: 519 -YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPR 574 + ++ + G+++P +F+P+ + L VL + LA Sbjct: 526 EVEALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSA 585 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVNL ++ I ++ + P ++ LEITE + S++ + L + G Sbjct: 586 VSVNLSARQFRHPSLTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLG 645 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++A+DDFGTGY++ LKR D +KID F + + + D +V ++ A A L V Sbjct: 646 VQLAVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQV 705 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L ++G +QG+L P P + Sbjct: 706 TVEGVETEEQLEFLERVGCDLVQGFLFAPPMPPDE 740 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 93/463 (20%), Positives = 188/463 (40%), Gaps = 22/463 (4%) Query: 283 QGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 ++ I + ++Y+ + + + QA D LT LPN Sbjct: 341 HRDGRLIPVSMIGFPIEFGGQPQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLF 400 Query: 341 EQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + ++ + ++ G + + R L+ ++ + Sbjct: 401 ADRLDRALTRARRRGDYQYAVLMIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMD 460 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L +++ + +V+ + + + T + G + Sbjct: 461 TVARLGGDEFAVILEELKSKKEVMAVVDRIGAALGKPCMLCGTTVTPGASVGIVLRTRDY 520 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++ + +L ++ + + + + + L +R ALD+G+LLL+ Sbjct: 521 QSPEDILRDADIAMYRAKESGRPSMI--FDRRMHQEILDAINLEADLRAALDRGELLLHY 578 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + EG++ ++ D G++ P +F+PL + L V+ + L Sbjct: 579 QPIVDVQTGRIEGFEALVRWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRA 638 Query: 566 HPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + SVN+ +++ + + + + + P + LEITE +A+ Sbjct: 639 WQLELPEAEQLSVSVNVSCHQFVKEGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQH 698 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + +L G +IAIDDFGTGY++ L++L D +KID F+ N IV+S Sbjct: 699 TAGELSRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKS 758 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I LA++ L+V+AE VE Q Q L QG++ RP Sbjct: 759 IIALARSLGLTVIAEGVEHQDQLDKLRNADCDKAQGFMFSRPV 801 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 90/476 (18%), Positives = 179/476 (37%), Gaps = 31/476 (6%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 +N+ + E++ + L + + + A D LT L Sbjct: 581 FHNKRKDGSLFWEHASISPVRNDAGDISHFLAIKEDITDRKRYEEQLQHLATHDNLTGLA 640 Query: 336 NFRALEQAPEQEAGKSFCCLRID---------------NLEFMSRHYGLMMRVHCIRSIC 380 N L+ EQ + + ++ G ++ Sbjct: 641 NRALLQDRLEQSILFA-------KRSGRLVAALLLDLDRFKIINDSLGHSFGDRLLQIAA 693 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGY 437 L ++ + + +L G E +++L+ E + + + R + + + Sbjct: 694 DRLRESVRGADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITAPFQIADREITVTA 753 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + E + L+ Q+ A ++ + + + +R Sbjct: 754 SLGISIYPQDGEDEETLIRNADIAMYQAKEEG--NAFRLYAPEMNIVVHEAMEMETDLRR 811 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 ALD+G+LLL+ QP + + G + ++ G++ P F+PL + L Sbjct: 812 ALDRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEW 871 Query: 555 VLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VLE++ + + + NL + I R+ + + P + LE+TE Sbjct: 872 VLENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLLELELTE 931 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N +++ +++L+ G +A+DDFGTGY++ L+R D +KID F+ D+ + Sbjct: 932 SMIMRNVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADD 991 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A + SI +A + L VAE VET++Q L + QGYL P + + Sbjct: 992 PSAAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEE 1047 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 81/297 (27%), Gaps = 30/297 (10%) Query: 45 AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTA---VMLGSQTFVVLCAC 101 + L ++ IL + W+ + ++ L L F A ML + F + Sbjct: 41 VGISLGLLSIILMLSPWQYIPGIVFDTRSVLLGISGLFFGAVATSVAMLMAAAFRLFQGG 100 Query: 102 AILRWQLGTRWRYGLTSRYVWQR-------LFWLGLVTPIGIKCSMYLVGSFFDFPLKIS 154 A +G + G+ Y R L W L G ++L+ F L Sbjct: 101 AAAWIGVGVIFASGIVGIYWKYRNRKSAEQLTWWQL---YGFGVLVHLIMLAFMLLLPWQ 157 Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 T F I V L+ ++ +++ R +S R +A K+ Sbjct: 158 TAFRVLHHISLPVLLIYPLATAMLGSLMLKRQRRDQISKALQTSEERLRMALKASKQGLY 217 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + E I GY F + ++ + AV L Sbjct: 218 DLNVQSGN-------MIVNAEYALILGYDPQNFRETNGDWIARMHPEDRSAVLAVYRNYL 270 Query: 275 LNYNQNFLQGVET-----EYSLAFILAVLISFSVC-----LLYMVRIYHRSEWLNRR 321 + F ++ + ++ +L + Sbjct: 271 AGKTEEFRAEFRQRTRCGQWKWVLSMGKIVERDTHGQPLRMLGTFSDITERRQSEEQ 327 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 110/560 (19%), Positives = 197/560 (35%), Gaps = 33/560 (5%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVP--VFFIIFTL 253 R+ E R + + + + + GY + + + Sbjct: 353 RQAALALKDSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYSIAESLGRPVSEF 412 Query: 254 GVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLYM 308 + LT + L L ++ + + Sbjct: 413 VSAEDSPLLEALTNQLLHGNKSQLRDELRLLTRAGEPRWVSVFVRSSQDAEGRVIATFGT 472 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNL 360 + + A D LT LPN L + L +DN Sbjct: 473 LTDITERKRAEEEIRRLAFYDSLTELPNRSLLYDRLRLAMASAARSRHHGAILFLDLDNF 532 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN- 419 + ++ G + +R + + ++E + L +L G E +++L+ E + Sbjct: 533 KDINDTLGHDVGDELLRQVASRMQGTIRETDTLARLGGDEFVIILNDLHPEQAQAAVEAE 592 Query: 420 -------ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 L + F + + LL Q ++ Sbjct: 593 TLGSKLLHLLAEPFRLGEHERHCTPSIGATLFGDGEVNVDELLKQADLAMYRAKDSGRN- 651 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDG 530 L E + + L R AL + L L+ QP + G + +L + Sbjct: 652 TLCFFEPEMHQVVKARAALEADFRKALREDQLHLHYQPHVDDQGHILGAEALLRWSHPER 711 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR--FSVNLMPLTLLQKN 588 G++ P +F+ + Q L + VL++ + LA + + R +VN+ + Sbjct: 712 GMVPPMEFIAVAEQTGLIIKLGRWVLQTACQQLALWHRESQWMRINMAVNVSAKQFRHPD 771 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + Q ++LE+TE + E+ + + L + G A+DDFGTGY++ Sbjct: 772 FVREVAEILQSTGAPAQHLVLELTESLLLEDTETVITRMNALRELGVGFALDDFGTGYSS 831 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL ++KID FV+DI+ + DA I I LAK L V+AE VET +Q+ L Sbjct: 832 LSYLKRLPLSLLKIDQSFVRDILVDANDAAIAEMIITLAKTLGLEVIAEGVETPEQRDFL 891 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 ++G QGYL GRP P+ Sbjct: 892 LEMGCHQFQGYLFGRPGPVD 911 >UniRef50_Q1N453 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1N453_9GAMM Length = 800 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 99/573 (17%), Positives = 213/573 (37%), Gaps = 36/573 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVP 245 M+ + ++ + E++ L+ L+ + + L T N + + Sbjct: 218 MVDVFNSMLSKIEQERSDLTSSEEKFRQLASLSPVGIFQINLKHDITYVNNRWSDITGIR 277 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ------GVETEYSLAFILAVLI 299 + +R + N+ + ++ + +++ + Sbjct: 278 QPNATLEHWLSHIRQEDRRAAVRAWRNLIENHQEFVVEVGFERNRDQITWAIIEASVLYD 337 Query: 300 SFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + + + A DPLT L N R + + + Sbjct: 338 GQGEIYGYMGAISDITDLKVAQLQMENLAFFDPLTGLSNRRLFKDRLHKSISESKRRGSF 397 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + R L ++E++ + ++ G E ++L+ E Sbjct: 398 VALLFLDLDQFKRINDSLGHDAGDVLLEETARRLENSVRESDTVSRIGGDEFTVLLNDVE 457 Query: 410 TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 ++H+ + R I N + + + + L+ Q+ Sbjct: 458 NTHGVRHIAEKILKKVCRPIMVKNQEIINTVSIGITLAPTDGDDVNTLMRNADMAMYQAK 517 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD-LLLYAQPIR---NKEGEGYDEI 522 A E ++ + + + +R ++D + ++Y QP + G + + Sbjct: 518 AMGRN-NYQFFSEEMNKEMMGYLEIEKDLRHSIDYPEDFIIYYQPKIELHSGRFVGAEAL 576 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA------THPCDKKGPRFS 576 + ++ PD+F+P+ + L V+ + P D + + Sbjct: 577 IRWKPEGKDMIPPDRFIPIAEESGLIVPIGAHVIRQACLQVKYMINTGIWPEDG---KVA 633 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +NL ++ ++ + ++ + EITE N E++++ + Q+ + G Sbjct: 634 INLSARQFSDPDLICKLQEILEQTKCPVHVLEFEITESTLMDNVENAIFTMRQIKEMGIS 693 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IAIDDFGTGY++ LKR D++K+D FV DI + D I ++ +A L VVA Sbjct: 694 IAIDDFGTGYSSLAYLKRFPIDVLKVDRSFVMDIPNDLNDMEITAAVIAMAHKLHLQVVA 753 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E +ETQ+Q L +Y QG++I RP P + Sbjct: 754 EGIETQEQIDFLKSNYCEYGQGFMIARPMPSDE 786 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 94/475 (19%), Positives = 177/475 (37%), Gaps = 24/475 (5%) Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLL 334 + ++ + ++ + A D LT L Sbjct: 451 EIRLRTHDGSHRWVSIYASARFDEDGHIMATFGTMMDISDRKEAEEEIRRLAFFDGLTGL 510 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN L + + +DN + ++ G + + + R + Sbjct: 511 PNRTLLHDRLGQALANTARTRHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENS 570 Query: 387 MQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 ++E + L +L G E +++L+ + + L + Sbjct: 571 VREADTLARLGGDEFVIILNDLHPDPARAATEAEAVGRKLINLLREPFQLAGQNRHVTPS 630 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F G ++ +L Q ++ + + + + L N +R A Sbjct: 631 IGATLFSGRSLGVEEVLKQADLAMYRAKNAGRN-TVRFYDPELHRAVEARFELENELRHA 689 Query: 499 LDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 LD+ + QP + G + +L G ++P +F+P+ Q L +VL Sbjct: 690 LDEDRFSVVYQPQVDAEGRVIGAELLLRWEHAQRGAISPAEFIPVAEQTGLIVPIGRKVL 749 Query: 557 ESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 + L + SVN+ + + + + + LE+TE Sbjct: 750 RTACAQLGAWQHTAAFRDLTLSVNISARQFRDPHFVPHLREILQETGAPGDRLKLELTES 809 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 ++ + +I++L G A+DDFGTGY++ LK+L +KID FV+D++ + Sbjct: 810 MLLEEIDTVVAHIDELRALGVEFALDDFGTGYSSLAYLKQLPLAQLKIDQSFVRDVLDDP 869 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA I + + +LA+ L V+AE VET +Q+A L LG ++ QG+L G P LAD Sbjct: 870 NDAAIAQMVVNLARTLDLDVIAEGVETVEQRAFLFGLGCRHFQGFLYGYPGDLAD 924 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 97/470 (20%), Positives = 192/470 (40%), Gaps = 20/470 (4%) Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 +++ ++ + L + + + + R A DPLT L Sbjct: 922 ELDYINRKGEKHPSWTGVTALKDEMGQIQSHIIISSDITHRKQTEARIQHLAYFDPLTGL 981 Query: 335 PNFRALEQAPEQ-----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 PN + +A ++ E+ + + +D + ++ G ++ + L + Sbjct: 982 PNRAQMHEALDRLMAKEESQLALLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGA 1041 Query: 390 NEKLYQLPGSELLLVLSGP-ETEGRLQHMV----NILNS--RQIHWNNTGLDMGYGAAWG 442 + ++ G E ++++ ETE +Q ++ IL+ + + L + Sbjct: 1042 KNLVSRIGGDEFTVIMATLPETEQAIQTIIDVSERILHQMMQPFFIEDRQLYLSASVGIA 1101 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + N + LL + A E ++ + +++ L N + AL + Sbjct: 1102 LYPENALSGTDLLRNADTAMYHAKAMGKN-NFQFYAEEMNEKAMERLELENNLHLALQRD 1160 Query: 503 DLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L Q + + G + +L + D G++ PDKF+P+I + L VL Sbjct: 1161 EFELTFQAQWDIKHNCICGVETLLRWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVLRRA 1220 Query: 560 LKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + P+ +VNL + RI R+ + P+ + LE+TE Sbjct: 1221 CEQIMDWQEAGYVIPKLAVNLSARQFKDAQMLDRICRIVDETGVDPELIELELTESILMD 1280 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + ++ + + K GF ++IDDFGTGY++ LK+ +KID F++++ N D Sbjct: 1281 DIDRTLAVLNEARKMGFGLSIDDFGTGYSSLSYLKQFPVSQLKIDKSFIQNLPYNQEDGQ 1340 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I R+I +A L V+AE VE + Q+ L +G +QGY+ P P Sbjct: 1341 ITRTIVAMANNLGLGVIAEGVENESQRQFLKTIGCYQVQGYMYSHPVPAD 1390 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 92/465 (19%), Positives = 188/465 (40%), Gaps = 22/465 (4%) Query: 285 VETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL- 340 + + + F + + S S ++ + + + ++ A D LT LPN Sbjct: 231 DGSSFPVEFTASPICKTNSESSGIVLVFQDISERKKTEQQLTRLAQYDCLTGLPNRALFT 290 Query: 341 -------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 ++ ++ + L +D + ++ G + ++ + + L E + Sbjct: 291 SLLSQAISRSDRRKNKLALLFLDLDRFKQVNDSLGHDVGDLLLQQVAQRLQLATLEGGTV 350 Query: 394 YQLPGSELLLVLSGPETE-GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 +L G E +++L +E + + + + + + G+ + Sbjct: 351 SRLGGDEFMVILEEVNSESHKAAKLAQKMITSLDAPFNILGREVLISTSIGIALCSGSTQ 410 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL + ++ + Q +K + L N +R AL + + L+ Q Sbjct: 411 CIDSLLKRADMAMYRAKEQGRN-NFQFYTAELQQQASKSIELENRLRHALQRKEFFLHYQ 469 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + G + +L +++P++F+P+ + L VL L Sbjct: 470 PQVDTNSGQIIGLEALLRWQPDGQALISPEEFIPVAEEAGLIVPIGEWVLREACSQLHRW 529 Query: 567 PCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + +VNL L ++ + ++ + + P + LEITE + + Sbjct: 530 HRSGLLSPTVKMAVNLSVRQLEHTSLLSTLTQILQETGLKPSQLELEITETAVMKDPDLV 589 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +H G ++++DDFGTGY++ LK L ++KID F+ DI D I+ SI Sbjct: 590 VNILHSIHAMGIQLSLDDFGTGYSSLRYLKLLPLHVLKIDRSFINDIGGKQRDQAILESI 649 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L++ L+VVAE VETQ+Q L + +QGY I +P+ A Sbjct: 650 IYLSRNLDLTVVAEGVETQEQLDFLSRFNCHSIQGYYISKPKSAA 694 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 98/464 (21%), Positives = 191/464 (41%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + D LT LPN Sbjct: 479 RKNGESYPEILSISSIRDDDGEIANYVAVFHDISDMKHKEEQLAHHLYHDGLTGLPNRVL 538 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + L +DN + ++ +G ++++ L+ L ++ + Sbjct: 539 VLDRLSMALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDED 598 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E L+V+ E + + + + + + + Sbjct: 599 TVARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDG 658 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ QS A + +S + +++ L + +R AL + + +Y Sbjct: 659 QDPASLVKNADMAMYQSKAKGRNSYF-LFTQQMSERIAQRLTLESDMRRALKEREFTVYF 717 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + E G + ++ +K DG I++P+ F+P+ + L VL++ K + Sbjct: 718 QPKVDLASGEVSGLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQV 777 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL P+ Q+++ ++ +R + + LEITE ++ +SS+ Sbjct: 778 LQGVGCSALTVAVNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSV 837 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L + G I+IDDFGTGY++ LK +KID F++DI + DA IV ++ Sbjct: 838 AQLNRLVELGITISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVV 897 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+ + VVAE VET++Q LL G +QGY RP PL Sbjct: 898 LMARTMGIGVVAEGVETKEQLDLLATFGCATVQGYYYSRPLPLE 941 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 97/468 (20%), Positives = 182/468 (38%), Gaps = 24/468 (5%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + + + + H A D LT LPN R+ Sbjct: 410 RKSGEIYPQHLTITAVQTSAGEITNYVGAFTDITQRKQDEADIHQLAFYDSLTGLPNRRS 469 Query: 340 LEQAP-------EQEAG-KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L++ + + +DN + ++ G + + L ++ + Sbjct: 470 LQERLDSALSSCRHTRQLGAVFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNAD 529 Query: 392 KLYQLPGSELLLVLSGP--ETEGRLQHMVNIL------NSRQIHWNNTGLDMGYGAAWGR 443 + +L G E +++L + L + +I+ + Sbjct: 530 MVARLGGDEFIVILENLGVDESNVLAQVKDIVAKVILTIQAPLTIGTQAYHPTCSIGIAL 589 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F + ++ + Q+ + + + + +R AL Sbjct: 590 FSEKDFS-DEVMKRSDMAMYQAKSSGKN-TYRFFDPVAEEALCSLARMDADLRFALSNQQ 647 Query: 504 LLLYAQPIRNKEG-EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L L+ QP + G + +L D G+++P +F+PL L V+ K Sbjct: 648 LELHYQPQYRCQTLIGAEALLRWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQ 707 Query: 563 LATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L + +VN+ Q N + +L Y +S + + LE+TE + Sbjct: 708 LQQWQERPETAELFIAVNVSARQFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDV 767 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E ++ ++ L +G R A+DDFGTGY++ LKRL D IKID F++D+ + D+ IV Sbjct: 768 EDTIQKMQALRSYGIRFALDDFGTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIV 827 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++I + + L+V+AE VET +Q A L +L +QG+L+GRP + Sbjct: 828 QAIIAMGQNLGLNVLAEGVETDEQLAFLTELDCLDIQGFLLGRPSSID 875 Score = 42.3 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 29/274 (10%), Positives = 63/274 (22%), Gaps = 15/274 (5%) Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 + + F + F ++ L Y +Q LG Sbjct: 69 SILLSVSGLFFGVIPTVIAASMAAVFRIMEGGQGTIAGLLIIMTSAGIGIYCYQWKQRLG 128 Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 G + + + + + + L + + +L L Sbjct: 129 HEVIKGYQLYLMGLTVHVSMMVCLLVLPYSTLGLLLSEITLPIIVIFPLATVLLGGLLSQ 188 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT---------PYENDFIA 240 +S A+ R R + +A+ LL + +D +A Sbjct: 189 QISRKKAEAALRESER--TSNHARHRLEATFSAIPDLLFEMDIEGRYLACHASDPDDLVA 246 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVST--LCLLNYNQNFLQGVETEYSLAFILAVL 298 + +F + + + E+ L+ Sbjct: 247 KPEELIGKSVFDFIPLDEAQIIVEAIREADLKGISKGRQVTLQVGRGLREFELSVSRKHD 306 Query: 299 ISFSVC-LLYMVRIYHRSEWLNRRWHLQAL-TDP 330 S + + R + R H+ A D Sbjct: 307 DESSEHHFIVLSRDITERKRHERELHIAATAFDS 340 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 94/446 (21%), Positives = 175/446 (39%), Gaps = 19/446 (4%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-------- 349 L ++ M + + A+ D LT LPN L EQ Sbjct: 1015 LADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRIEQAIKRTQQEEKY 1074 Query: 350 -KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G + + +I L ++ + + + G E +++L Sbjct: 1075 LFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVARFGGDEFVILLENL 1134 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + M + + +E+ LL ++ Sbjct: 1135 TSRTEATKMAQQITDELRSSFCLQGQDFFISVSIGITFPSSYEESASELLRNADIAMYRA 1194 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + + Q T+ + L +R AL++ +L+++ QPI + + G++ + Sbjct: 1195 KEKGRAR-YTIFDSKMHIQATRLLELETNLRLALEREELIVHYQPIVSLTTGKLLGFEAL 1253 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNL 579 + G+++P +F+P+ + L VL + + + G R SVNL Sbjct: 1254 VRWEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQMKAWQKEFSGLDKIRVSVNL 1313 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L ++ + + K+ + + + LEITE +N E + Q+ +I+I Sbjct: 1314 SGKQLEYPHLINCLESILKQTGLEGKNLKLEITESMLMNNKEVVSDLLLQIKGKNIQISI 1373 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L L D +KID FV + + IV +I +LA + VVAE V Sbjct: 1374 DDFGTGYSSLSYLHYLPVDTLKIDRSFVNRMTQLGENFEIVEAIINLAHHLQMDVVAEGV 1433 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQ 725 ET+Q L +LG + QGY +P Sbjct: 1434 ETEQHIKQLKQLGCESGQGYFFSKPL 1459 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 95/450 (21%), Positives = 189/450 (42%), Gaps = 16/450 (3%) Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------Q 346 + + V + + R ++ R+ QA D LT LPN L + Sbjct: 255 ITDVKGEVVNYIAVFRDISEAKASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASSNDR 314 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 ++ + + +DN + ++ G ++ ++ + + E + + ++ G E +++L Sbjct: 315 KSCIALLFIDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVIMLK 374 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + M + + ++ + + + + + +T L+ Sbjct: 375 DLQDKHDAAVMADTIINLFAQALTVESHQFTITPSIGIALYPEDGKTPYSLVRNADTAMN 434 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 ++ ++ +++ + N +R +Y QP N G + Sbjct: 435 KAKQEGRNR-YHLFTPGLTESALRRISMENQLRQTASDNGFTVYYQPKVNLHDNTIVGME 493 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNL 579 ++ ++ DG I++P +F+PL + L QVLE+ + + SVNL Sbjct: 494 ALIRWIQPDGTIISPAEFIPLAEETGLIVPIGEQVLEAACLDTVELNQRFGTNLKVSVNL 553 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q+ + I+ + I P + LEITE + E + +E++ K G ++I Sbjct: 554 SLRQFKQEQLMKNIMDIIAMTAICPSCLELEITESTVMDDIEQTKTILEKMDKLGITLSI 613 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK + +KID FV + N D +V++I LA++ LS VAE + Sbjct: 614 DDFGTGYSSLSHLKNMPMHTLKIDQSFVAGLPHNKSDQKLVKAIMSLARSFDLSTVAEGI 673 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET +Q + +LG + +QGY P PL + Sbjct: 674 ETPEQYNYMRELGCEVMQGYYYSPPVPLEE 703 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 104/464 (22%), Positives = 189/464 (40%), Gaps = 20/464 (4%) Query: 284 GVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR-- 338 + Y ++ + + + + + + + A DPLT LPN Sbjct: 349 KDGSIYPQLATISAVMDDKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHL 408 Query: 339 --ALEQAPEQEAG----KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 LEQ E + L ID+ + ++ G + + L ++ N Sbjct: 409 LSLLEQHIETGHKNQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAH 468 Query: 393 LYQLPGSELLLVLSGPETE-GRLQHMVNILN--SRQIHWNNTG-LDMGYGAAWGRFDGNQ 448 + ++ G E +++L ++ L+ + +IL+ + N L + + + Sbjct: 469 VARIGGDEFVIILPDVHSDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDG 528 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + + LL + + ++ ++ V + + + A+++ L L Sbjct: 529 QDSETLLKNADTAMYLAKKNGRN-GYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLEF 587 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N E G + +L + G++ P F+P+ + L VL + Sbjct: 588 QPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNA 647 Query: 566 HPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R +VN+ L L Q N R+ + + Q + LEITE + + ++ Sbjct: 648 WLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAI 707 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ QL + G I++DDFGTGY++ LK L + +KID FV D+ +N+ IV +I Sbjct: 708 ASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAII 767 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + K SL VVAE +ETQ+Q L + G Y QGYL RP Sbjct: 768 AMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAE 811 >UniRef50_C6WW34 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW34_METML Length = 623 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 97/532 (18%), Positives = 199/532 (37%), Gaps = 25/532 (4%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 V P + F + L L V+ + N Sbjct: 76 IPFIVYTATYTEPEDEKLALSLGADAFILKPCEPEDFLARFIDVLVKGVAASPDIASEVN 135 Query: 281 FLQGVETEYSLAFILAVLISFSVCL----LYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + ++ L ++ L ++ + R + + A D LT LPN Sbjct: 136 SGHSDTLKDYSVILIRKLEEKTLQLEEANQFLQQDIARRKEAEDKIQHLAYYDLLTNLPN 195 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L + + + +D+ + ++ G + + + + L M+ Sbjct: 196 RLLLIDRLQHTLAMSARHQNHGALLFIDLDHFKTLNDTKGHSVGDLLLVEVAKRLQTCMR 255 Query: 389 ENEKLYQLPGSELLLVLSGPETEG-----RLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 E + L +L G E +++L + + + + + S + ++ Sbjct: 256 EGDTLARLGGDEFVVILQDLSEDSSQAAVQAETVCAKIISAINLPYYLDSYLYHSSTSVG 315 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F + T+ LL + Q+ + + + + L + +R A+ Sbjct: 316 VCLFRNQEFTVDELLKRADIAMYQAKSAGRNTQ-RFYDPTMQAALEARAALESDLRLAIK 374 Query: 501 QGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + LY Q + G + ++ G++ P +F+PL + L V+E+ Sbjct: 375 KNQFRLYYQMQVDHSGNVHGAEALIRWQHPQKGLVPPLQFIPLTEETGLIIPIGHWVMET 434 Query: 559 LLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + D + + +VN+ + R I + R+ I P + LE+TE Sbjct: 435 ACAQIKRWESDPLTRNLQVAVNVSACQFHDPSFVERAIEMLSRHKIKPGNLKLELTESLV 494 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N E ++ ++ L +G ++DDFGTG+++ L +L D +KID F++++ N D Sbjct: 495 LDNVEEAIMKMQALKSYGVLFSMDDFGTGFSSLSYLTKLPLDQLKIDQSFIRNMCMNNRD 554 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A++V++I +A + V+AE VE++ Q+ L + QGYL +P P+ Sbjct: 555 AVVVQTIIGMANNLGIEVIAEGVESETQREFLEQNKCNLCQGYLFSQPLPID 606 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 99/470 (21%), Positives = 192/470 (40%), Gaps = 26/470 (5%) Query: 281 FLQGVETEYSLAFILAVLISFSVCLLYMVRI---YHRSEWLNRRWHLQ-------ALTDP 330 F+ +T F + L+ S L ++++ + + Q A DP Sbjct: 406 FIDQNQTSRYFEFTVTPLVDGSGQLNSVIQLGHEITNYLDIQEQLQQQKNDLDFIAYHDP 465 Query: 331 LTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN + + +D + ++ +G + + Sbjct: 466 LTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDLDRFKEINDSFGHASGDLVLIECGKR 525 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGA 439 L ++E + + +L G E +++ +T + ++V + S I N + Sbjct: 526 LKKAIREIDTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIFVNENIFHITASI 585 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + LL Q+ + ++ Q ++L+ N +R AL Sbjct: 586 GISIFPNDGTDANQLLQNADAAMYQAKEDGKN-TYHFYTKEMTEQAYNRLLMENNLRDAL 644 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 D LY QP + + G++ ++ GI+ PD F+PL + L Q++ Sbjct: 645 DNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEETGLIIPLGKQII 704 Query: 557 ESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + ++ + R ++N+ L + + + P + +EITE Sbjct: 705 AMASQTISEWHQANLTNARIAINVSAKQLRDSRFFHNLNTALNKNNCQPDWIEIEITESS 764 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N E ++ + +L + G I+IDDFGTGY++ LK+L +KID FV ++ + Sbjct: 765 VMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKIDRSFVSNLPQDKD 824 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 DA I ++I ++++ +L ++AE +ETQ+QQ + + G + +QGY RP Sbjct: 825 DAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSRPL 874 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 116/493 (23%), Positives = 204/493 (41%), Gaps = 27/493 (5%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLYMVRIYHRSEWLN 319 + A +++ L + L ++V ++ CLL R + + Sbjct: 633 RSALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNEVDCLLLTARDVSQLKNAQ 692 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + A DPLT LPN L + L +D+ + ++ G + Sbjct: 693 AQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPV 752 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMV---NILNS 423 ++ I L ++ + + +L G E +++LSG E E +++ + L + Sbjct: 753 GDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLRELLA 812 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + L + + T LL + ++ + Sbjct: 813 EPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTT-QLFHTTMQK 871 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLP 540 ++++ + N +R AL +G+L L+ QP + G + +L G P +F+ Sbjct: 872 AASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQPPSQFIQ 931 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKK----GPRFSVNLMPLTLLQKNIAGRIIRL 596 ++ + L +L+ A D VN+ P Q + GR++R Sbjct: 932 VLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQNDFVGRVLRS 991 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 Y + Q + LEITE N E ++ + +L ++G A+DDFGTGY++ LKRL Sbjct: 992 LDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKRLP 1051 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV+D + DA IVR+I +A++ L+V+AE VE +Q A L +LG Sbjct: 1052 VDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCHLY 1111 Query: 717 QGYLIGRPQPLAD 729 QGYL RP PL + Sbjct: 1112 QGYLHSRPLPLPE 1124 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 117/557 (21%), Positives = 201/557 (36%), Gaps = 30/557 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + F + P + +L ++ + +V +F + Sbjct: 249 VKRLAFYPMYLNSQTTP-------YLFMWAGIPEQQILAPANLEWKINLSVMAVVILFSV 301 Query: 250 IFT--LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 + G L P L A + + + A + + L Sbjct: 302 LLARFFGQYTLVKPLAALAQASHNFGQ-DQPWQLPSQYCQPAEIEQLSATFTTMTQRLEN 360 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 I +R A D LT L N L Q + + +D Sbjct: 361 SRAI---QLQSEQRLEHLATHDELTGLANRTLLLDRLDHAIEEGMRQHHAVAVLLIDLDR 417 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + I + L ++ + + +L G E LVL E L ++ Sbjct: 418 FQVINDSLGHDQGDRLLCQIGKRLCQHVRSTDTVSRLGGDEFALVLGDLNNEESLIPLMQ 477 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L S H +N + + F + LL QS H Sbjct: 478 DLLKEISSPCHIDNHHIVVTASIGISLFPNDGNDSITLLRNADLAMYQSKRHKGD--FTF 535 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 ++ K + L +R AL++G+LLL+ QP + + G + ++ G++ Sbjct: 536 YSSDMNQHAVKILELEKDLRQALERGELLLHYQPKVSLQSGKIVGCEALIRWQHPLRGLV 595 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGR 592 +P F+PL + L VLE + + +VNL N+ Sbjct: 596 SPADFIPLAEETGLIVPIGTWVLEQACQQAISWQQQQLPTITMAVNLSSRQFRHGNLCDV 655 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + + P + LEITE + E ++ + L + G +++DDFGTGY++ L Sbjct: 656 VDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMIALKERGVLLSLDDFGTGYSSLNYL 715 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 +R D +KID F++D+ ++ A + SI D+A L+ VAE VET +Q L K Sbjct: 716 RRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAHHLGLTTVAEGVETVEQLDFLEKCH 775 Query: 713 VQYLQGYLIGRPQPLAD 729 LQGYL RP P D Sbjct: 776 CDILQGYLYSRPLPAED 792 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 91/447 (20%), Positives = 174/447 (38%), Gaps = 17/447 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 + + ++ + D LT LPN +Q E Sbjct: 597 RGRITHYVGISNDLTATKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEHKV 656 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL---SG 407 + +D + ++ G + + + + L + + + + G E L+L + Sbjct: 657 ALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDEFYLLLGRLTD 716 Query: 408 PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 +T + V L S+ + L + F + E ++ L+ + + Sbjct: 717 IDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAMYHAKK 776 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKE-GEGYDEILA 524 + +E + ++ + N +R A++ + LY QP + G + ++ Sbjct: 777 DGGN-SFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIR 835 Query: 525 RLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPL 582 ++ + G ++P +F+PL + L VL + R +VNL + Sbjct: 836 WVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAV 895 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + I + + + + + LEITE + ++ + +L G +A+DDF Sbjct: 896 QFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDF 955 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK D +KID FV+D+ T+ D ++ +I LA + + VVAE VE Sbjct: 956 GTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDA 1015 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L + G QGY RP P + Sbjct: 1016 DQVAFLRQRGCDVFQGYHFSRPLPAKE 1042 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 113/454 (24%), Positives = 185/454 (40%), Gaps = 25/454 (5%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGK 350 + + R + ++ A DPLT LPN R A+ A + + Sbjct: 388 DGAFLGYRGVGRDITERKRVDAEIERLAFFDPLTGLPNRRLLTDRLRRAIGTAARERSHG 447 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-- 408 + L +DN + ++ G M + + LL + + + G E +++ G Sbjct: 448 ALLFLDLDNFKDLNDTLGHDMGDRLLVQAAQRLLACAGAGDTVSRFGGDEFVVLAEGLPG 507 Query: 409 ---ETEGRLQHMVNILNS---RQIHWNNT-GLDMGYGAAWGRFDGNQETLQP---LLGQL 458 + N + + R F G LL Sbjct: 508 DMHRARADAAVLANRITAALGRPYAVGGMGHHHSTPSIGLALFGGGTGDGAGVDDLLKHA 567 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE- 517 Q+ A + + + + L + +R AL+ +LLL+ QP+ N +G Sbjct: 568 DLAMYQAKAAGRN-TIRFFDPSMLQAVLARAALESELRLALESDELLLHYQPLVNGDGSM 626 Query: 518 -GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPR 574 G + ++ G++ P +F+P Q L VLE L Sbjct: 627 LGAEALVRWRHPQRGLVMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWSRSAATAQLV 686 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ Q + ++++ +R P+ + +E+TE ++ E + +EQL G Sbjct: 687 LAVNVSVRQFRQPDFVDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHG 746 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 AIDDFGTGY++ LKRL D +KID FV+D++T+ DA IVR+I LA++ L V Sbjct: 747 VGFAIDDFGTGYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEV 806 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VAE VET Q L + G + QG+L GRP P A Sbjct: 807 VAEGVETTGQLKFLQRHGCKAFQGHLFGRPAPAA 840 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 95/466 (20%), Positives = 175/466 (37%), Gaps = 21/466 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + + + A DPLT LPN Sbjct: 281 RKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQLKQSEAKLESLAYYDPLTALPNRLL 340 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + +D ++ + + + L ++ ++ Sbjct: 341 LHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLSYQAGDQLLVMVSKRFLSCLRVDD 400 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNN-TGLDMGYGAAWGRFDGN 447 L + G E +L+ L + + + + +G F G+ Sbjct: 401 TLARPGGDEFVLIQEALADPQEATETARELLASLDQPFQLDGGQEIYLGASIGITVFPGD 460 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 T LL + + E ++ ++ + +R A++ +LLLY Sbjct: 461 GTTPPDLLKNAEAAMYHAKENGRNR-FSFYAEQMNADALARLQMEMALRQAVENRELLLY 519 Query: 508 AQPIR----NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 QP + G + ++ +G ++ PD+F+PL + L V++ + L Sbjct: 520 YQPQWQLADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQL 579 Query: 564 ATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 K R +VN+ N+A + + +++ I LE+TE E Sbjct: 580 RIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILMEKPEE 639 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + + G IA+DDFGTGY++ L R ++KID FV+D+ + A+I S Sbjct: 640 AAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADS 699 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I LA L VVAE VET++Q+A L G QG+L P P Sbjct: 700 IIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAE 745 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 108/600 (18%), Positives = 206/600 (34%), Gaps = 36/600 (6%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ------ILWRRDIAPSLGKEKRAFTLS 218 T ++ + ++M F + A ++ E+R Sbjct: 366 TWSEIQGRTGRNVTFSMAFGVSQMRLGDRRTAICVVQDITRRKQAEQALRDSEERLKLAV 425 Query: 219 WLAALSVL---LLLLCTPYENDFIAGYLVPVFFIIFT-LGVGKLRYPFLNLTWAVST--- 271 V + +FI L ++ +P Sbjct: 426 RATRSGVFDVDYANGIFWWSPEFIEMLGYEGSPPGQADLLFREILHPDDRPAALAQIERY 485 Query: 272 ----LCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + + + V + + + + Sbjct: 486 LAGKSGDYHAFYRLRHRDGSLIWIEARGQAIRDDRGRPVRITGTMTDVTDRKRFEEQLMY 545 Query: 325 QALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 + DPLT LPN L+ + + L +D + ++ G + + Sbjct: 546 VSTHDPLTGLPNRTLLQDRLQHAADQAERKGNSVAVLLLDLDRFKLVNDSLGHQVGDKLL 605 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 R+I + L ++ + + +L E L++ + + S+ + L Sbjct: 606 RAISQRLASSVRPADTIGRLGADEFLIIAEDLTEPQMAARVAETVLAGLSQPFGLDGQQL 665 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + F G+ + LL + + ++ ++ L + Sbjct: 666 FITCSIGITLFPGDATDIGALLRDADTAMHTAKSAGGN-GYRFFTPEMNEAAVARLSLEH 724 Query: 494 TIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R A+DQG L+ QP + + G + +L + G++ P F+P+ + + Sbjct: 725 ALREAIDQGQFELHYQPKASLETMQTVGVEALLRWRHPEMGMIPPSTFIPVAEETGMILA 784 Query: 551 FDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + L+ + + +VN+ + + A RI L Y + P + L Sbjct: 785 IGDWVLRAALEQINRWERAGLEPLPVAVNVSVRQITSSHFADRIQSLLDEYGVRPDLLEL 844 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE SN + +L G RIA+DDFGTGY++ L+RL +K+D FV + Sbjct: 845 EITETAMMSNMAFIADGLAELRGRGIRIAVDDFGTGYSSLSYLRRLPITTLKVDRSFVSE 904 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +N I +I + + L+VVAE +ETQ+Q L + QG+LIG P P A+ Sbjct: 905 APSNADTGAIAATIIAMGRQLGLTVVAEGIETQEQLDFLRRHRCHEAQGFLIGFPVPAAE 964 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 93/465 (20%), Positives = 178/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + Y ++V+ + + R H A D LT L N Sbjct: 533 RKDGGIYPKWMSISVIRGEDGMIRYHVAHFTDVSSERAAEERLHHMAHHDVLTGLLNRLS 592 Query: 338 ------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 +AL A + + + +D + ++ G + + + L +++++ Sbjct: 593 LKGRLDQALAAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSD 652 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ G E +++LSG E + + L + L + + Sbjct: 653 VVARVGGDEFVIMLSGVEHTSAVAMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIYPTDG 712 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 E L+ + + ++ +++ + +R AL + LY Sbjct: 713 EDGDILMKNADAAMYHAKMAGRN-NFQFFDAKMNEAALERLNTEHALRRALANQEFCLYY 771 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP+ + + ++ + G++ P KF+ + + L VL + + LA Sbjct: 772 QPVIDLASNRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLAD 831 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 G + VN+ + + N+ + + Y I P+ +I EITE A ++ Sbjct: 832 FAAAGISGIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETV 891 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ L+ G +AIDDFGTGY++ L+ + +K+D FV+ I +I + Sbjct: 892 RILDLLNAMGVSVAIDDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATI 951 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA + L VVAE VETQ Q L G +QG+L RP P + Sbjct: 952 GLAHSLELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPADE 996 >UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=Q21UE9_RHOFD Length = 1114 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 112/565 (19%), Positives = 217/565 (38%), Gaps = 35/565 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAA----LSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 ++ E R L+ L++ + + L ++ T Sbjct: 544 ITARKQSEERLRESEARFRALTELSSDWYWEQDAQFRFVRLDGSSQTSMRLPEDNYLGVT 603 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQ----NFLQGVETEYSLAFILAVLISFSVC---- 304 WA L + L ++ F V Sbjct: 604 RWETD-AQGVSQAQWAAHRAVLQAHETFHDFEMLCTDAVGCLTWVAISGTPIFDVQGQFK 662 Query: 305 -LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 + R + + A D LT LPN R L +Q + + Sbjct: 663 GYRGIGRDISERKRAEEKIERLAFYDVLTDLPNRRLLMDRLQQALVSSAREHGAGALLFI 722 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ET 410 +DN + ++ G + ++ + + LL ++E + + +L G E +++L G + Sbjct: 723 DLDNFKDLNDTQGHDVGDALLQQVAKRLLASVRETDTVARLGGDEFVVMLQGLERTQADA 782 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 +++ + + ++ + FD Q+TL LL Q ++ + Sbjct: 783 ITQVEQVGRKIMAQLNQPYRLGSAEHHSTPSIGVTLFDNQQQTLDDLLKQADLAMYEAKS 842 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILAR 525 L + + T++ L +R L + +L+L+ QP+ + G + ++ Sbjct: 843 AGRN-TLRFFDPTMQALVTQRTALELELRHGLARDELVLFYQPVVDQDARVVGVEALVRW 901 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLT 583 G++ P F+P+ Q L VL L + + +VN+ Sbjct: 902 QHPQRGLVAPLAFIPMAEQTGLILPLGQWVLRVACLQLVSWSAQAATERLTMAVNVSARQ 961 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q +++ + ++ +P+ + +E+TE ++ + ++ + +L G R ++DDFG Sbjct: 962 FRQPEFVQQVLTMLRQTGANPKRLKMELTESLLLTDTQDAIAKMSELRDVGVRFSLDDFG 1021 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK L +KID FV+D++T+ DA I R++ L ++ L VVAE VET Sbjct: 1022 TGYSSLSYLKLLPLQQLKIDQSFVRDVLTDPNDAAIARTVLALGQSLGLGVVAEGVETVG 1081 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ L + G QGYL G+P P+A Sbjct: 1082 QRDFLLQHGCTRFQGYLFGKPVPIA 1106 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 117/536 (21%), Positives = 202/536 (37%), Gaps = 24/536 (4%) Query: 216 TLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS 270 T+ ++ +LL L+ I GY + + Sbjct: 206 TVFENSSEGILLTDADGTLITVNPAFTRITGYTEEQALGRRSRMFRTDHVGQATNMQMMQ 265 Query: 271 TLCLLNYNQNFL---QGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 +L + Q + Y + L+ + + + R + R Sbjct: 266 SLAEHGHWQGEMFDRHRDGRLYPVWLSLSAVYDEDRVSNYVGVFTDISRRKAAEDRLVFL 325 Query: 326 ALTDPLTLLPNFRALEQAPEQ------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 A DPLT L N AL + E E + + +D + ++ +G + +R + Sbjct: 326 ASHDPLTRLLNRDALFRKLEDICLSGIEQSFAVLFIDLDRFKLINDSFGHATGDNLLRIV 385 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMG 436 L ++ N L + G E L+L + M N L S+ I N L + Sbjct: 386 AARLSFVVGSNALLARQGGDEFTLLLEDTGQRTAVIDMANRLLDELSQPITLENQELHIT 445 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + + LL ++ + G + +++ L N +R Sbjct: 446 ASIGIALAPEHGKDAATLLRHADTALYRAKDAGKN-TFAFFTHTLHGLSNQRLALENALR 504 Query: 497 TALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL + L L QP + + G + +L + G ++P F+PL + L Sbjct: 505 HALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWHHPELGQVSPATFIPLAEETGLILPIGR 564 Query: 554 QVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VLE+ + LA +VNL + + + ++ + + LE+T Sbjct: 565 WVLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDPGLTHHLKAVLSDSGLAARRLELEVT 624 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E +N +++ + +L + G R++IDDFGTGY++ +LKR D +KID FV I Sbjct: 625 ESTLINNPTAAIALMTELKELGVRLSIDDFGTGYSSLAQLKRFPLDTLKIDRTFVSGIPA 684 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + D I +I +AK SLSVVAE VET Q+ L + G + +QGY P Sbjct: 685 DASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFLARCGSELIQGYFYSPPLAAE 740 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 111/566 (19%), Positives = 209/566 (36%), Gaps = 20/566 (3%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + F + + +S + + A L + Sbjct: 259 LSATAFEDMLSLTISDVTSLKRREASFRLLFDNNPMPMWVFDAATTRFLKVNDAAVRHYG 318 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL-AFILA 296 F + + + + L+ L + N L+ +E + AF Sbjct: 319 FSRSAFLGMKLPEIWPADEREAH--LHALQQAGDNYLSDRNWRHLKADGSEIEIIAFGRR 376 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-------G 349 V S L + R A D LT LPN ++ + Sbjct: 377 VAFERSDGFLVAIVDVTERRKAEARIAHMAHHDGLTNLPNRSFYQERLQHALEARPAECH 436 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + C+ +D + ++ +G + ++ + L ++ + +L G E +VL Sbjct: 437 VAVLCVDLDLFKNVNDSFGHPVGDRLLQLVAERLRLEVRGANMVARLGGDEFAIVLVSVV 496 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + R + + +G G+ + + LL ++ Sbjct: 497 SPNEASDFAARVIERLSVPYDVDGLEVVIGASIGIALSPGDGDNGEDLLRNADMALYRAK 556 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEIL 523 E+ + Q K+ + +R A +G LY QP+ + G++ +L Sbjct: 557 ESGGG-NHHFFEKEMDRQAQKRRDMEIDLRYAFAKGQFELYYQPLVDVARDRVAGFEALL 615 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 + G+++P F+P+ L VL AT P + + +VNL P+ Sbjct: 616 RWRHPERGMISPADFIPVAEDIGLIVGLGEWVLRQACAEAATWPSE---IKIAVNLSPVQ 672 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +N+ +I + +SP+ + LEITE + E+++ + Q+ G RI++DDFG Sbjct: 673 FRSRNLVQAVIGALAQSGLSPRRLELEITESVFLAETEANLATLHQMRDLGVRISMDDFG 732 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L+ D IKID FV+D+ IVR+I L ++ +++ AE VETQ Sbjct: 733 TGYSSLSYLRSFPFDKIKIDRSFVQDLAQRPDCLAIVRAIAGLGRSLNITTTAEGVETQA 792 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + G +QG+L +P + Sbjct: 793 QLDWLREEGCNEVQGFLFSPARPAGE 818 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 118/621 (19%), Positives = 219/621 (35%), Gaps = 26/621 (4%) Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY--YLTRM 189 + + D P ST G + + LL + + L +L R+ Sbjct: 308 YMFDYRQMQRFGLASVDLP-PGSTIVGRPPSFWMRHRLLITVLSGMAGLQLLAGWFLWRL 366 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIAGYL 243 + Q A + + L+ L + + + G Sbjct: 367 SGTRRGTQKYLHEKEAQFKTVIRATHDAVVVINERGLVTLFNPAAEELFGWSSAEMLGCN 426 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFS 302 + + + T S + + E+ + L+V Sbjct: 427 LDILMPEGYRDQHRHDVASFFSTGEPSEAVGRSLELLAVHRSGKEFPIELSLSVGKYGHE 486 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 +L ++R + R A D LT LPN E + + Sbjct: 487 RFVLAILRDISSQRQVEREIKQLAYYDSLTGLPNRALFEDRFRRVLTTADRAGKMAALLF 546 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +DNL ++ +G ++ I + L+ + Q + + G + +++L G Sbjct: 547 IGVDNLNSINDTHGHTYGDKLLKVIGQRLVAVAQNGATVVRWEGDKFVVLLPGLSDAETA 606 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + ++ + + + LL S Sbjct: 607 DTVARQILQSIAEPCEVDDQSFFVTASIGGAVYPQHGADGDKLLKNADMAMYASKELGRN 666 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + E ++ + ++ L + +R AL + + L QP + + G + +L Sbjct: 667 -TYCTFTEEMNRRVLERSGLEHNLRLALAREEFFLAYQPQVDQATGKVLGSEALLRWRHA 725 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQK 587 + G+++P +F+PL + L VL++ R +VNL Q Sbjct: 726 EKGMISPGQFIPLAEESGLILPIGHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQFQQP 785 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ ++ K + P+ + LE+TE ++A+ ++ + L G IAIDDFGTGY+ Sbjct: 786 DFFDQVAQVLKDTELDPRYLELELTESLLMADADVAVETLRALRDLGVGIAIDDFGTGYS 845 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK D IKI FV DI + DA IV ++ +A L +VAE VET+ Q Sbjct: 846 SLSYLKTFPIDRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQLEF 905 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L Q +QGY GRP P Sbjct: 906 LRARRCQVMQGYYFGRPMPAE 926 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 111/521 (21%), Positives = 198/521 (38%), Gaps = 21/521 (4%) Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L ++ I + + + R + ++ V + + N + Sbjct: 288 FSQLTGNSPSEIIGKHPSSLIDPGVDS--HEARQLWKSIRLQVQRVGVWQGEVNSTRKNG 345 Query: 287 TEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA---- 339 Y ++ + S L + + ++ QA D LT LPN Sbjct: 346 ERYWEQLVVTPIKDNNGESTGYLILGEDISIRKRYEQQLLRQANYDILTGLPNRMLALDR 405 Query: 340 ----LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 L QA E+ L +DN + ++ G + R + ++ + + Sbjct: 406 LKLALAQARRDESKVGVMFLDLDNFKHINDTLGHDAGDTLLIEAARRISSCLRGTSTVAR 465 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E L+VL G + + + + + + F + + Sbjct: 466 LGGDEFLVVLPGLNGPDASSQVAERILKTFAPPFMLSGQEVFVTTSIGIATFPDDSDNSG 525 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL ++ A +S + +++ + + +R AL+ G+ LY QPI Sbjct: 526 TLLQHADAAMYEAKHKGK-SAYARFTPEMSEVSHERLQMESHMRKALELGEFELYFQPIV 584 Query: 513 NKEGEG---YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC- 568 + G + +L G++ PD+F+PL + L V++ + Sbjct: 585 DTASGGLVAAEALLRWNNPAMGMVMPDRFIPLAEETGLIIPIGEWVVKEACQAAYCWQAM 644 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + +VN+ P I+R ++ P+ + LEITE N+ + ++ Sbjct: 645 TGREISIAVNVSPRQFRDPGFTDAIMRALNDSNLRPELLELEITERLILDNSIETADILK 704 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 QL K G R+++DDFGTGY+ LK D +KID FV+D++ DA +VR+I ++A Sbjct: 705 QLDKVGIRLSVDDFGTGYSALSYLKSYPFDTLKIDKSFVQDVLKENEDASLVRAIINMAH 764 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L VVAE VE + L Y QGY RP P D Sbjct: 765 SLGLKVVAEGVEEEDLTHFLKAEHCDYSQGYFYSRPLPEQD 805 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 101/460 (21%), Positives = 194/460 (42%), Gaps = 30/460 (6%) Query: 299 ISFSVCLLYMVRIYHRSEWLN--------------RRWHLQALTDPLTLLPNFRALEQAP 344 ++ + R + + QA D LT LPN Sbjct: 125 DGKTIGTVGAGRDITNLKKTQLDLEKNLKILDEQREQLEYQANHDSLTDLPNRVLFMDRL 184 Query: 345 EQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 +Q + + + +D+ + ++ G + + + R + M++++ L +L Sbjct: 185 QQSINIAQRYDNKVALLFIDLDHFKEINDSLGHGVGDKVLIEVSRRMKNQMRKSDTLSRL 244 Query: 397 PGSELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E ++L+ + ++ + N L +G + + + Sbjct: 245 GGDEFCIILNDIIDIEDMSDIITSGMEALKEPMEINGHTLYVGMSIGVSVYPNDGNSASS 304 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL ++ +E ++ + ++V L +R AL++ +L++Y QP + Sbjct: 305 LLKNADAAMYKAKGDGRN-TYCFYDEAMTERAFERVFLETALRKALEEDELVVYFQPQID 363 Query: 514 KE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 G + ++ G + PDKF+PL + + D V++ L Sbjct: 364 ARENKLVGMEALVRWEHPIMGFIYPDKFIPLAEITGMIVQLDRLVMKKALTQFKKWDKAG 423 Query: 571 KGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 P + ++NL + + + I + S + + E+TE Q +N E+S+ +++ Sbjct: 424 LNPGKLALNLAIKQIEENDFIEFIENILDCEDCSYKNIEFELTENQIMNNPEASIETLQK 483 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G IAIDDFGTGY++ LKRL D +KID F+KD+ + DA I ++I L + Sbjct: 484 LSDLGISIAIDDFGTGYSSLAYLKRLPIDKLKIDRSFIKDLPQDADDAAITKTIISLCSS 543 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L V+AE VET++Q+ + + G Q++QGY RP + D Sbjct: 544 LNLKVIAEGVETEKQKNFILQNGCQFIQGYYYSRPLSIED 583 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 118/755 (15%), Positives = 254/755 (33%), Gaps = 39/755 (5%) Query: 7 LIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVV 65 + I+++ F + L + + +I S + + + + R + Sbjct: 52 TTMGLGIWSMHFVGMLALTLPIKVLYDMEYVILSVILAIFVSSIALFTITKRNLHARQLG 111 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL 125 M ++ + + T +V+ + I R + Sbjct: 112 IAGILMAAGISGMHYVGMAAMMIEITYDTRIVILSIMIAATASAAALWLLFYFRRDQSKY 171 Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTF--------FGDADAIFTVVDLLSLFTAVL 177 +L + + + G + + + G ++ ++ L T +L Sbjct: 172 AYLYKLGS-SLIMGAAIAGMHYTGMVAAHFYGTEQPTKQVGTQIEPESLAYIIVLATFLL 230 Query: 178 IYNMLFYYLT-----RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 I LF + ++ +R + T + ++ + + Sbjct: 231 IGITLFGLFINKRLSQKDTVIQESESWYRSLYKNNEYGIISLDTGGCIIKMNPAVTKIGG 290 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET--EYS 290 E +FI ++ + I + F N+ E S Sbjct: 291 LREEEFINQHVSKIRMHIVEEQRELTKDSFAQSFA----PNRNNFETTIFHPNGNRVELS 346 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 + + + V +V+ + + A D LT LPN R Q Sbjct: 347 VLNVPVEIEGEVVGNHIIVKDITEENRVKEKIRYLAYHDELTDLPNRRKFNQVLHQSIEK 406 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE-NEKLYQLPGSEL 401 + + + + ID + ++ G ++ + + + + + ++ G E Sbjct: 407 SSQDSSSFAVMVIDIDRFKMINDSLGHSYGDIFLQGVSDRISKSAKGYHATIARMGGDEF 466 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++ + + + + ++ + F + LL + Sbjct: 467 TILCETGADGREAASLADKIIEALKQPFTLKDSEFYISASIGTAIFPDHGTDAVALLKKA 526 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 + L Q + + + +R A+++ +L++Y QP + Sbjct: 527 DTAMYEVKKQGKNGHL-FYTTDFDAQLLENIEIERDLRKAIERKELVVYYQPQFHSESNR 585 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPR 574 G + ++ G+++P F+P+ + L VL + + Sbjct: 586 MIGVEALVRWNHPTKGMLSPGVFIPIAEETGLIYEIGTWVLREACRQMKQWHDKGGPLIP 645 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVNL Q+N+ I + + ++P + LEITE + S+ + +L+K G Sbjct: 646 VSVNLSSHQFHQRNLVQYIKNILEETKLAPHFLELEITESMMM-DPAVSISILHELNKIG 704 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 RI++DDFGTGY++ LK+ +KID F+ D+ N D IV +I +AK L V Sbjct: 705 TRISLDDFGTGYSSLSYLKKFPIHKLKIDRSFITDLSRNENDKAIVATIISMAKHLKLDV 764 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE +ET+ Q +L + + +QGY RP + Sbjct: 765 IAEGIETKDQLDILTENHCKEIQGYYYSRPLSANE 799 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 88/444 (19%), Positives = 175/444 (39%), Gaps = 15/444 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKS 351 + + R + +R QA D LT LPN A+ QA QE + Sbjct: 572 GVITHFIAIKEDITRRKAQDRILAYQANYDALTGLPNRFLAIDRLKLAILQAERQEQRVA 631 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G ++ + L +++++ + +L G E L+++ + Sbjct: 632 VMFIDLDRFKNVNDTLGHEYGDLLLKQVAERLKKCLRKSDTVARLGGDEFLIIIPNLKQP 691 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + S + + + + + + + L+ Sbjct: 692 SHCKGIAKKILSSLEKPFNLLEEEAFISASIGITLYPDDGDDVNALMRNADTAMYLGKRG 751 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 ++ ++++ N + AL + ++ L QPI ++ G + +L Sbjct: 752 GRND-FKFYTLGMNETNRTRIIIENLLHQALKKKEIYLVYQPIMELKTEKVIGAEALLRW 810 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 G ++PD+F+P+ + L + V+ + + +VNL P Sbjct: 811 NNPQLGQVSPDQFIPIAEETGLINQLGAWVISQACQEVVQWKAQGTPISVAVNLSPRQFR 870 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + I I+ + LEITE+ ++ S + QLH+ F ++IDDFGTG Sbjct: 871 DSKLLKIITDAIAVNGITNHDLELEITEKLLLEDSPGSQGILSQLHQMNFPLSIDDFGTG 930 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y+ L + + +KID F+ D+ + +V++I ++ +L V+AE VET +Q Sbjct: 931 YSALSYLIKFPFNRLKIDRSFITDMTHSQKAMGLVKTIIAMSHGLNLQVIAEGVETSEQL 990 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L G Y QGY RP + Sbjct: 991 NSLKSQGCDYAQGYFFSRPLTGEE 1014 >UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSA6_PSYIN Length = 980 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 89/437 (20%), Positives = 183/437 (41%), Gaps = 15/437 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRID 358 ++ + A D LT LPN L+ A + L +D Sbjct: 534 GTIQDITERKLAEAHLQALANFDQLTGLPNRFMLKDKITYLFTLARRNNESLTMMFLDLD 593 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + + ++ G ++ + I + L ++E + + ++ E +L+ + + L Sbjct: 594 HFKNVNDTLGHVIGDRLLIEIAKRLKSAIREVDLVSRIGSDEFILLFPNTDADSALNIAT 653 Query: 419 NILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 ++ S + + L + + + E + L+ Q+ + Sbjct: 654 KLIETVSLPTVFEHHELFITATIGIAIYPNDGEEFETLIKNADTAMSQAKRYSRN-TFHF 712 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 E + +++ ++N +R AL + ++ ++ QP + G + +L + G + Sbjct: 713 FTEEMQVHLQRKLKIVNAMRHALLRNEMQVHYQPQISAVKGHIIGAEALLRWRHPELGDI 772 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGR 592 +P +F+P+ VL + + + + +VNL L Q N+ G Sbjct: 773 SPGEFIPIAESSGQIVAIGEWVLRTAIDQMKVWQNEGLAPMVVAVNLSALQFKQANLIGM 832 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 II + + ++ Q + LE+TE + + ++ + QLH G R++IDDFGTGY++ L Sbjct: 833 IISMLNKAQLAHQYLELELTEAITMDDPQQAINIMNQLHAKGIRMSIDDFGTGYSSLSYL 892 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K+ + +KID F+ ++ ++ D +V +I D+AK + +AE VET +Q L G Sbjct: 893 KQFKVYKLKIDQSFICNLARDSDDRAMVHAIIDMAKNLGMQTIAEGVETAEQLEFLRLHG 952 Query: 713 VQYLQGYLIGRPQPLAD 729 +QGY + P + Sbjct: 953 CNEIQGYYFSKAIPADE 969 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 111/594 (18%), Positives = 207/594 (34%), Gaps = 28/594 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS--- 218 + + + L + L T +I + A + EK T + Sbjct: 20 LVLSPLFLCVVMAPRYYSVALTAGFTFLIAAFCVAMGRYTITAQKLHESEKLFRTFADFI 79 Query: 219 --WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP--FLNLTWAVSTLCL 274 W +S L+ T + I+GY F + + ++ +P + Sbjct: 80 YDWELWISAEGSLIHTSPACERISGYATTAF-KNDSDLLRRIIHPEDLQRYDRCENEATP 138 Query: 275 LNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 ++ + + L + +R + A +D L Sbjct: 139 GFREFRMIRRDGQLRWVELLSRQLRNEEGKDLGRRLTIRDITGKKAREHEIRQIAYSDAL 198 Query: 332 TLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN AL +A A + L +D+ + ++ G + + L Sbjct: 199 TGLPNRLALKMDMDKALAKASRNTAMVAVLMLDLDDFKQINDTTGHAKGDEMLLLLTSRL 258 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR----QIHWNNTGLDMGYGA 439 + E + L +L G E ++VL+ ++ + + + Sbjct: 259 REQLGEKDSLARLGGDEFVVVLNEIDSATCAAKKTEKILASLRDNPFDLVVAKVFASASI 318 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F N + LL ++ + + +T ++ L +R A+ Sbjct: 319 GIALFPQNGRDAETLLKHADMAMYEAKNVGRN-TYRFFSDELHRRTIERHKLEVGLRRAV 377 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 + + L QP + + ++ + G++ P F+P+ + L +L Sbjct: 378 RKKEFFLVYQPQVDLGTGRIVALEALVRWQHPEAGVLLPSTFIPVAEETGLIHIMGEWIL 437 Query: 557 ESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + R +VN Q ++ RI ++ + P + LEITE Sbjct: 438 RTACHQAMQWQRMGLPPMRIAVNFSARQFRQPDLVERIEQILLESGLPPHHLELEITESV 497 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N ES++ + L +IAIDDFGTGY++ LK D +KI FV+DI + Sbjct: 498 FMENLESAIETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRLKIAQDFVRDIPDDED 557 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA I+ +I +A + V+AE VET +Q L + G +QG+ RP + Sbjct: 558 DATIIETIMAMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFYFARPMQAEE 611 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 115/566 (20%), Positives = 220/566 (38%), Gaps = 45/566 (7%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLL--LLLCTPYEN------------DFIAGY 242 ++ +E+R L AA +++ C Y + + I Sbjct: 324 LAQRQQIETALRQREQRFKALIENAADIIIILDAQFCFSYLSPSIKKVLGYSCEELIGQS 383 Query: 243 LVPVF-----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 ++ + F+ + P ++++ ++ + ++GV Sbjct: 384 ILTLIHEDEEFVFRETLNKVIENPEISVSEVEYHFRTRHHTWSIMEGVVKNLLNE----- 438 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------A 348 ++ + + + AL D LT LPN L Q Sbjct: 439 --PGVEGIVLNFHEITQRKLAEAQLRHDALHDSLTGLPNRALLMDRLTQAINREKGRFYT 496 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G ++ + S L + + + + +L G E +++L Sbjct: 497 HFAVLFLDVDRFKLLNDSLGHLVGDQLLISFANCLKKIRRFTDTIARLGGDEFVILLEDL 556 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 G+ + +N S ++ + + + + E +L + Sbjct: 557 SEVGQAIKVAQRINEILSSSFLIDDQEIFITASIGIAFSNSSYEHPSQILRDADTAMYYA 616 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 + + + KQ+ L N +R A+++ +L++Y QPI N G + + Sbjct: 617 KNNGRGK-YQVFDSSMHIHALKQLQLENDLRRAIERDELVVYYQPIICLKNGTLIGVEAL 675 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNL 579 + G+++P +F+P+ + L D VL + + + D K SVNL Sbjct: 676 VRWQHPQEGMISPAEFIPIAEETGLIIELDQWVLNTACQQMRFWQEKYSDFKSITLSVNL 735 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q ++ I + + + Q + LEITE N S+ +EQL + + + Sbjct: 736 SGRQFSQPDLIKNIDNILTQNKLEKQYLKLEITETVLIENPNSAAEMLEQLIERKVTVCL 795 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L R D++KID FV +I TNT ++ I+R+I LA+ + V+AE + Sbjct: 796 DDFGTGYSSLGYLHRFPLDVLKIDRSFVSNIETNTSNSTIIRTIITLARELEIEVIAEGI 855 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQ 725 ET+QQ+ L LG Y QGY P Sbjct: 856 ETEQQREFLQSLGCHYGQGYWFSPPV 881 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 94/466 (20%), Positives = 190/466 (40%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T + ++ + + + + + A DPLT LPN Sbjct: 451 RKNGTIFPQNITISTIYDEVGDVRYFVAVFADISAQKENEAQLTHLAYFDPLTHLPNRMK 510 Query: 340 LE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 QA + + +D + ++ +G + + + + L + + + Sbjct: 511 FMMQLKQEVRQAKRLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQVGDQD 570 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWN-NTGLDMGYGAAWGRFDGN 447 L ++ G E + ++SG + +N L + + L + + + Sbjct: 571 VLSRIGGDEFVALISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMGVSLYPND 630 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 LL ++ E ++ Q+ + + L + + A++Q L L Sbjct: 631 GTDADTLLRNADAAMYRAKNDGRN-NYAFYTESLTQQSFEHLKLQSALYGAIEQNALYLM 689 Query: 508 AQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP +++ G++ +L G+++P F+P+ + L L VLE+ + Sbjct: 690 YQPKLDLVSRKTVGFEALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLETACRQGM 749 Query: 565 THPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + K R +VN+ L + + + R+ + + + LE+TE N + + Sbjct: 750 RWLREGKHFGRIAVNVAGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMMQNPDLA 809 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++++L G +++DDFGTGY++ LK+L +KID FV+DI +T + I +++ Sbjct: 810 IRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAV 869 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L A L ++AE VET++Q L + QGYL RPQ D Sbjct: 870 IALGHALKLDIIAEGVETKEQADFLQQNQCDQAQGYLFSRPQLPED 915 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 107/488 (21%), Positives = 197/488 (40%), Gaps = 22/488 (4%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 + P ++ L + + E +L LA +++ + +R + Sbjct: 719 IALPLAISKAEMAVLTIYAAEPDAFNLD--EVALLEELASDLAYG---IGALRTRVAHKE 773 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGL 369 R A D LT +PN L + + + L +D+ ++ G Sbjct: 774 AEDRLDFMAHHDALTGMPNRILLHDRFEQVAATARRRGSNVAMLFLNLDDFHLVNDVLGR 833 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQI 426 + H + + L ++E++ + + G E +++L ++ +V + S Sbjct: 834 SLADHMLVQVVERLHGCIRESDTISREGGDEFIILLGDVGDLAAIEIIVQKILDAFSEPF 893 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 ++ + + F + L+ Q +++ A + E ++ Sbjct: 894 TVDDHIVSVTSSIGISIFPNDGRDFNRLISQSEAALQKAKAAGKD-TYNFFTEQMNINAL 952 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIA 543 + + L +R A+ + +Y QP + G + ++ G++ P KF+PL Sbjct: 953 EHMQLQGQLRHAIINQEFRIYYQPQIDTLNERMIGAEALVRWQHPQHGLVPPLKFIPLAE 1012 Query: 544 QFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL + +VNL + + NI +I+ +R Sbjct: 1013 RSGLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRGNIVETVIQALERSG 1072 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + + LE+TE + E M + +L G +++IDDFGTGY++ LKRL D +K Sbjct: 1073 LPAENLELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVDKLK 1132 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D+V + DA IV +I L L+V+AE VET+ Q LL L +QGYL Sbjct: 1133 IDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQGYLF 1192 Query: 722 GRPQPLAD 729 RP P D Sbjct: 1193 SRPIPAED 1200 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 104/470 (22%), Positives = 196/470 (41%), Gaps = 24/470 (5%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + Y ++ ++ + + + + R H A D +T LPN Sbjct: 476 RKDGSIYPKWLTISAVLGDSGEVTHYIGLHQDVSERKLAESRIHQLAYYDQVTGLPNRIL 535 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L++ Q + +DN + ++ G + ++ + L +E++ Sbjct: 536 LQERLSQVMAKCRASSNYGVLLFVDLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESD 595 Query: 392 KLYQLPGSELLLVLSGPETE-----GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 + +L G E +++S T+ + L S R N Sbjct: 596 TVARLGGDEFAVIMSELGTDPSAAMQGAEAAARYLLSELGRTFQLGNVIHRNTVSIGATL 655 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F G QE+++ L+ Q+ Q+ + + + ++ + +R A+++ Sbjct: 656 FKGEQESIESLMRQIDLAIYQAKGAGRN-TVRFFDPSMEIALRERAAIEEALRYAIEEEQ 714 Query: 504 LLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LL+ Q + EG + +L + G+++P F+PL + VL+ Sbjct: 715 FLLHYQAQIGEDGRIEGAEVLLRWQHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAA 774 Query: 562 WLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 LA G +VN+ + L Q + ++ + + P + LE+TE ++ Sbjct: 775 QLARWAESPVMAGLVLAVNVSAVQLRQPDFVEQVTTVLREAGADPGRLKLELTESMLVND 834 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 E+++ ++ L G ++DDFGTGY++ LKRL +KID FV+D++ + D I Sbjct: 835 VEATIAKMQSLKAIGIGFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAI 894 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 S+ LAK+ L V+AE VET+ Q+ LL +G QGYL RP P+ D Sbjct: 895 ASSVVALAKSLGLGVIAEGVETEAQRELLAGIGCHCYQGYLFSRPLPIGD 944 >UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74EC6_GEOSL Length = 799 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 108/563 (19%), Positives = 210/563 (37%), Gaps = 37/563 (6%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R + E + L ++L + DF AG + G+ Sbjct: 218 SRVLQELHESEAQNRALLNAIPD-MMLHVCREGTILDFRAGNGC-AYAAFGGNLRGRTIA 275 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA-------FILAVLISFSVCLLYMVRIYH 313 L A + + + + EY L ++ + + +L +VR Sbjct: 276 DLLPPGAAAQFMAQVGHALATGTMMVCEYELEGPGGLNTHEARIVANGTGTVLAIVRDVT 335 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSR 365 A D LT LPN +A + + +D+ + ++ Sbjct: 336 ERRQSEEMIRYLAHHDSLTGLPNRIFFGEMLELVLSRARRDGKQVAILFVDLDDFKLIND 395 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLY------------QLPGSELLLVLSGPETEGR 413 G H +R + L ++ ++ + + G E +L L ++ Sbjct: 396 TLGHAAGDHLLREAAQRLKGCVRSSDYVASGAESGLCGNIARFGGDEFILSLGNLDSVDD 455 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + S R+ + + + + + E L+ + Sbjct: 456 VVAVTQRIISEFSREFRIDGHEIFVSVSIGISMYPDDAEDTGSLVRNADMAMFAAKEEGG 515 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 + ++ +++ + ++R AL++G++ ++ QP + E G++ + Sbjct: 516 P-SFRFFTRGMNEAAQQRLSIELSLRKALERGEIFVHYQPKVDLSCGEITGFEALARWHH 574 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQ 586 + G++ PD F+PL + L R VL + T + ++NL Sbjct: 575 PELGLIPPDTFIPLAEKNGLIVRIGEWVLRAACAQARTWIDEGFSDLCMAINLSSHQFTS 634 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N+ + + + P + EITE E +M + +L G RI+IDDFGTGY Sbjct: 635 GNLTSMVKEVLDETELPPSCLEFEITEGILMERTEKTMRILSELRDMGVRISIDDFGTGY 694 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKR + +KID FV++I + DA I+++I +A+ +L VVAE VE+ +Q Sbjct: 695 SSLGYLKRFPVNTVKIDRSFVREIDSPHEDAAIIKAIIAVARNLNLQVVAEGVESHRQTE 754 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L G QG+L G+P + Sbjct: 755 FLLAHGCNEAQGFLFGKPVHPDE 777 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 90/431 (20%), Positives = 165/431 (38%), Gaps = 16/431 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + R A D LT L N AL+ + + + +D + ++ Sbjct: 659 QRKQAERSLRFMASHDGLTGLFNRAALQHELARAIKRSNRHQKQFAVIFVDLDRFKHIND 718 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + I+ L L++E + + + G E +L+L + + + + Sbjct: 719 TLGHGVGDEMIKICGERLTALLREADVVARFGGDEFVLLLENLSSANDAAGLAEKVLACC 778 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 L + + N + LL ++ ++ Sbjct: 779 AEPFFLAGRELHVSASVGVSIYPDNGADAEALLKNADTAMYRAKERGRN-TFRFYAAKMN 837 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFL 539 Q T+Q++L + +R AL++G+L ++ QP + G + ++ G++ P +F+ Sbjct: 838 AQNTEQLMLESALRHALERGELEMHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFI 897 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L LE + SVNL P + + I + + Sbjct: 898 PIAEELGLIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQFESRTLIADIQAVLE 957 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + P + LEITE +N E + + + G +AIDDFGTGY++ LK Sbjct: 958 ASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLS 1017 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ D+ + ++ I LA + VVAE +ET Q L G QG Sbjct: 1018 TVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQG 1077 Query: 719 YLIGRPQPLAD 729 Y + +P P + Sbjct: 1078 YWLCKPVPADE 1088 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 106/521 (20%), Positives = 199/521 (38%), Gaps = 24/521 (4%) Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 L + EN+ ++ + + L +Y + +++ Sbjct: 170 ALCEMLGYSENELFGVSVLDITHPTDIELTER-----LFAEAMGGQTRSHDYEKRYIRRD 224 Query: 286 ETEY--SLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE- 341 ++ + + ++ ++ A D LT LPN + Sbjct: 225 GETLWAHVSTSWHYNEDGTPSYSVALISNITPHHQAKQKIRQLAYFDGLTGLPNRQLFLE 284 Query: 342 -------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 QA + C + ID + ++ YG ++++ + L M + L Sbjct: 285 HCNSSLTQARRNRSPLGVCIIDIDRFKGVNDTYGYESGDALLKTVSQRLSDCMSREDVLA 344 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L E V++ ++ + + + I L G F + Sbjct: 345 RLGSDEFAAVIASVGSQDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDA 404 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL + Q+ H + ++ +++ + +R ALD L L+ QP Sbjct: 405 EALLKNAATAMHQAKQHGSN-NFRFFSKGMNRMAWERIEIETGLRRALDLQQLALHYQPQ 463 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L + G ++P +F+PL + L VLES + Sbjct: 464 VDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHR 523 Query: 569 DK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R +VN+ Q R+ + +R I+P+ + +E+TE ++ ++ + Sbjct: 524 AGFPSLRMAVNISARQFKQAGFIDRLDAIIQRSGINPELLEMELTESLIMEKSDETLMTL 583 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + G ++AIDDFGTGY+ LK D IK+D FV+DI NT DA I +I +A Sbjct: 584 VDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMA 643 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + V+AE +ET++Q A L + QGY GRP P+ Sbjct: 644 HSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVPVE 684 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 122/550 (22%), Positives = 211/550 (38%), Gaps = 24/550 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSV-LLLLLCTPYEN-------DFIAGYLVPVFFIIFT 252 RR + E++ A + V +L Y N + A LV + Sbjct: 123 RRHMRALEESEQQYRATMGAALVGVYVLQDFRFRYVNPELCRYFGYSADELVDKLGPLDL 182 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRI 311 + + Y L + L+ + + A + V Sbjct: 183 VVAEEREYVREQLARRARGEPGHPFELTGLRRDGSHFPFMVFGAPSTWRGQPASVGTVFD 242 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + R A DPLT LPN LE + + +D + + Sbjct: 243 LSEIKAAEDRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGRDRRAATLMFIDLDRFKTV 302 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + G +M +R + L ++ ++ + +L G E +++ EG ++ IL Sbjct: 303 NDSLGHLMGDQLLRLAGQRLRDSVRLSDTVARLGGDEFIVLAPDTGAEGAVRLAEKILEV 362 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + ++ L + R+ + + LL Q+ + Sbjct: 363 FAAPFDLDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQAKREGRN-GFRMFSIEM 421 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + + +LL +R ALD G L L QP+ + G + +L G ++P +F Sbjct: 422 NAPILESLLLETQLRRALDHGQLSLVYQPMVDIASGRIVGAEALLRWQHPQHGEISPVRF 481 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + L VLE L + +VNL L + NI+ ++RL Sbjct: 482 IPVAEESGLILPIGEWVLEQALGQVQRWRAAGHPDLVMAVNLSALQFERLNISNTVLRLL 541 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 Y + A+ LE+TE +AE ++ + L G R+++DDFGTGY++ L RL Sbjct: 542 DHYGLPGSALELELTESVLMEDAERAVAAMLNLADRGVRLSVDDFGTGYSSLAYLTRLPL 601 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +KID FV++I ++ + R+I DLA++ +L V+AE VE + Q LL + Q Sbjct: 602 AKLKIDRSFVRNIPSDASARSVARTILDLARSLALEVIAEGVENEAQLLLLREWCCDQAQ 661 Query: 718 GYLIGRPQPL 727 GYL RP P Sbjct: 662 GYLYSRPVPA 671 >UniRef50_Q3JAB6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JAB6_NITOC Length = 700 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 104/510 (20%), Positives = 205/510 (40%), Gaps = 30/510 (5%) Query: 240 AGYLVPVFFIIFTLGVGK---LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL- 295 AG + + ++T + + + W + L E ++ ++ Sbjct: 190 AGASLLAHYPLWTASLIRDTAIPAALREGVWEGEAVIL--------NPSGGEIPVSQVIL 241 Query: 296 --AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 ++ L + R + + + D LT LPN L Sbjct: 242 SHRNALNQVEFLSTIARDISERKHYEQELQYRVTHDTLTHLPNRILLRDRLIQVLAHAKR 301 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + L +DN + ++ G + C+R++ L ++E++ L + G E L++L Sbjct: 302 NQRLTAVLFLDVDNFKQINDGLGHLTGDKCLRTLAHHLAGCIRESDTLGRYGGDEFLIIL 361 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 S + ++ ++ + S+ + NN + + + + + + LL Sbjct: 362 SDLRSYSDVETLIKKIRATVSQPLKLNNNDVFITLSIGVSLYPQDGDDEEALLKTADAAM 421 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 + ++ + ++ + L + AL++ + +LY QP + + Sbjct: 422 HTAKHSSPGQC-RYYRPEMNVRGSELLALETDLHRALEREEFVLYYQPQLDVTTGQITAV 480 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + ++ + G+++P F+PL+ Q L L + + R +VN Sbjct: 481 EALIRWQHPNRGLVSPRDFIPLLEQTGLIEEVGKWGLNTACRQAKAWHSQGYPIRMAVNC 540 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q + + ++ ++ + P + LE+TE + +S+ Y +++L + G +AI Sbjct: 541 SARQFQQ-HFLDIVHQILQKQSLDPAYLELEVTESVVMQDTQSATYILQRLKEMGVTLAI 599 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR +KID FV+D+ N DA I +I L + L VVAE V Sbjct: 600 DDFGTGYSSLAYLKRFPIHSLKIDCSFVRDVTKNEEDAAIAETILLLGNSLGLEVVAEGV 659 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET+ Q +QGY IGRP P D Sbjct: 660 ETEAQMRFFQDRHCHRIQGYWIGRPMPAKD 689 >UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5G1_9CHRO Length = 997 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 128/664 (19%), Positives = 235/664 (35%), Gaps = 44/664 (6%) Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 +++ L + + L+ P+ + Y + + + F Sbjct: 340 PIQWLVKSHQRYYESPALIKTLLKEPKNNFSLIYPLFLADKAYGIFA------EPGPAFV 393 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 D +T +++ +L+ +L + + + + A +R Sbjct: 394 KTDLKYT--GIIAATVGILLTGVLTNVVVTLTHRRTQLEQQIQLRTAELKKMAERLRLAL 451 Query: 219 WLAALSVLLLLLCTPYEN---------DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV 269 A + L T D+ F + R + + A Sbjct: 452 EAANQGIFDFDLLTNQATVSPEYALILDYNPEKFQETFSSLIERTHEDDREKIMAMYEAY 511 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFS------VCLLYMVRIYHRSEWLNRRWH 323 + +N F Q T + I + LL + + Sbjct: 512 LNGKISQHNLEFRQKTATGNWKWIMSVGKIVQWDAQHQPIRLLGTHTDITGHKQSEAKIK 571 Query: 324 LQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A DPLT L N R + E + + +D + ++ G H Sbjct: 572 HLAYYDPLTSLANRRLFLEHLESALSVARSKGEYGAILFIDLDQFKTLNDARGHDAGDHL 631 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE---------GRLQHMVNILNSRQI 426 + + + L +++++ + +L G E +++L E + + L S Sbjct: 632 LIEVAKRLKQSVRKSDTVARLGGDEFVVLLPQLHHEPTTAAHLSREVAEKVRQKL-STPF 690 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + + F ET+ LL + Q + + + Q Sbjct: 691 VFQHEEFIISASIGITIFPKANETVSDLLKEADTAMYQVKEKGRN-GVCFFDTTMLVQVE 749 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L +R AL++ + LY QP + + G + +L G++ P F+PL Sbjct: 750 SRFTLEKELRRALERQEFRLYLQPQVDINERIVGAEVLLRWQHPSLGLVPPCAFIPLAED 809 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL+ +LA SVN+ P L Q + ++ + Sbjct: 810 TGLIISIGEWVLQQACFFLADFQAKNPDFHLSVNISPRQLSQAEFVSNLKQIINITAVQA 869 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 ++ LEITE + + + +L G +++DDFGTGY++ LKRL + IKID Sbjct: 870 NSLTLEITERLIIQDVDYVSSVMSKLQDLGINLSLDDFGTGYSSLAYLKRLPLNEIKIDK 929 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+DI + A ++ +I +A+ +L+VVAE VET +Q L K G + QGYL G+P Sbjct: 930 NFVQDIGNYSNHAPLIEAILAVARHFNLTVVAEGVETIEQANFLKKRGCHFYQGYLYGKP 989 Query: 725 QPLA 728 QPL Sbjct: 990 QPLE 993 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 85/458 (18%), Positives = 182/458 (39%), Gaps = 16/458 (3%) Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + ++ + + + + + + + A DPLT LPN + + Sbjct: 335 RKSGAVFPELLTISKIDGQNSGFVAIFTDITQLKETEEQLQKLAHYDPLTELPNRYLINE 394 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + L ID+ + ++ G + + L L+++++ + Sbjct: 395 RLQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLRELLRDDDTVG 454 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E L++L + ++ + + + + + + +T Sbjct: 455 RIGGDEFLMLLEDINSPDVATNIAEKIIGALRKPTILEGRSVSVSASVGISIYPDDGQTA 514 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ + E ++ + VL+ + +R A + + L QP Sbjct: 515 ETLMSNADAAMYSAKEQGRN-TFRFYSENLTRAAFQNVLIDSALREAKSRNEFRLAFQPQ 573 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L G ++P +F+P + L VLE Sbjct: 574 IDIVTNSLLGLEVLLRWHHPTLGTVSPAQFIPQAERTGLIRDIGQWVLEQACLQGNKWLA 633 Query: 569 DKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + R +VN+ ++ ++ ++ + + P + LE+TE + E + N+ Sbjct: 634 EGLPFGRLAVNVSAPQFRAEDFVDQVRQVLEYANFPPNRLELELTESVLVQDTEQLIGNM 693 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 ++L G + AIDDFGTGY++ LK++ D +K+D FV +I T+ D +I ++ L Sbjct: 694 DELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSFVDNISTDDNDRIIAEAVVALG 753 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +A L V+AE +E ++Q L +G QG+L G P Sbjct: 754 QAMGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPM 791 >UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVS2_RUBXD Length = 762 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 122/689 (17%), Positives = 228/689 (33%), Gaps = 39/689 (5%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV-- 121 + L + + + S+ +LG + +L+ + + L + Sbjct: 72 LADCLWSYYWSRGSVPYPSYADALYLLG--YVFLGAGLLLLQHRTVSNGLDALVDPLMVA 129 Query: 122 --WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 L+W ++ P Y+ P K + + + L Sbjct: 130 SGGALLYWGLIIGP-------YVHDPSLSLPAKAVSVAYPLLDVLLLAALARYLLGFGGR 182 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 Y L A ++ + ++ WLA +L P Sbjct: 183 VPALYLLGLSFAVLLLADSVYGLQVLQGSYRDGSWVDAGWLACYVLLGAAALHPSMRGLS 242 Query: 240 ---AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 G P + L + + L F LA Sbjct: 243 VPQPGSAEPALL-TNRRIALLTGAALTAPGLLAAQAALGVRIDAY--PIAAGCVLIFALA 299 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-------- 348 V+ + ++ ++R E L R QAL DPLT L N A Sbjct: 300 VIRIRGI-VVALLRTLSERERLQERLEQQALHDPLTGLANRALFSDRLAHAASRANPLDC 358 Query: 349 -GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + + S+ + ++ ++ + +L G E +++ Sbjct: 359 GRLAVLMLDLDGFKSVNDSLGHEVGDALLVSVAGRIRACVRPSDTVARLGGDEFAVLIEE 418 Query: 408 PETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 G + + R G + LL Sbjct: 419 ISDVGAAVRVAERILDRLGEPYSVGGVGRVAAASVGVAFGP--AREAKSLLRDADAAMYV 476 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + + E + +++ L +R AL++G+ ++ QPI + E + Sbjct: 477 AKERGKGR-YEVFEPRMRNARAEKLRLEAELRAALERGEFAVHYQPIVSFATGEVVEVEA 535 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ + G + P +FL + + L VL + + + +VNL Sbjct: 536 LVRWERPGRGTVGPAEFLSVAEESGLIVPIGRWVLREACRQVREWQKGGSRELALAVNLS 595 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L + + + + + LEITE+ A +A + +E+L G RIA+D Sbjct: 596 ASQLHHPRLVREVEEALGLSGLEARHLKLEITEQAAVEDAREAARRLEELSALGVRIALD 655 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFG+GY+ L+ D +KID F++ I + IV ++ LAK+ ++ V AE E Sbjct: 656 DFGSGYSALSYLRTFPVDTLKIDRSFIEGIGRDLQATSIVGAVIALAKSLNMCVTAEGTE 715 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T++Q A L LG QGY RP + Sbjct: 716 TEEQLAHLRSLGCDLAQGYYFSRPASPEE 744 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 95/447 (21%), Positives = 179/447 (40%), Gaps = 20/447 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGK 350 ++ L + + + + A D LT LPN E + Sbjct: 279 GQALGLEGFITDISKLKQAETQLRHDAFYDKLTGLPNRSLFMDRLEYCIKRVKRHPDQIF 338 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G + I L ++E++ L +L G E ++L G + Sbjct: 339 AVLFLDLDRFKVVNDSLGHAAGDQLLVEIAERLTACVRESDTLARLGGDEFTVLLEGIKD 398 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + N + + + + LL ++ A Sbjct: 399 LSDALLVCGRIQQSLNCPFNLNGREVLITVSTGVALSTMGYDDPEQLLHNADAAMYRAKA 458 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILA 524 + + + Q+ L +R A+++ + L+ QPI + E G++ +L Sbjct: 459 LGKAQ-WEVFTADMHSNASAQLQLEVDLRRAIERQEFQLHYQPIFHLETAAIVGFEALLR 517 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMP 581 G+++P +F+P+ + L VL+ + L+ SVN Sbjct: 518 WHHPLRGLISPVEFIPVAEETGLILPISWWVLQEACRQLSRWQTQFPLEVPLFVSVNFSS 577 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + +I + ++PQ++ LEITE NAE++ + ++ G ++ IDD Sbjct: 578 KQFSEVGLIPQIEDILHTTGLAPQSLKLEITESAIMENAEATAAKLLEIKALGIQLGIDD 637 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L R DI+K+D FV + ++ IV +IT L++ + VAE VET Sbjct: 638 FGTGYSSLSYLHRFPVDILKVDRSFVSAMDSHEN-LQIVHTITMLSQNLGMRAVAEGVET 696 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q A L + QY QGY +P + Sbjct: 697 AEQAAQLRAMNCQYAQGYFFSKPIDAS 723 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 85/458 (18%), Positives = 177/458 (38%), Gaps = 19/458 (4%) Query: 285 VETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 T++ + +V S + ++R + + A D LT LPN L + Sbjct: 389 DHTQFPMEISSSVFSEPSGSFVTLVLRDLTERKTFENQLLYLANYDALTGLPNRIHLIER 448 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + L +D + ++ G + + + L +++ + + + Sbjct: 449 LKQAIPLAERNGQHLALLFLDLDRFKGVNDSLGHASGDLLLVEVSKRLSNCVRKGDTVAR 508 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 G E + +L G E + + + + +N + M + + E+ Sbjct: 509 FGGDEFVFLLEGLEEREDAKPIAEKILGALNAPFEIDNVQVFMNGSIGISTWPHDGESSD 568 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL + ++ + + ++ + +R AL++ + L+ QP Sbjct: 569 LLLRRADAAMYRAKELG--NSYAFYNPEIGALPERRFSMERELRRALERNEFELFFQPQI 626 Query: 513 NKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G + ++ + G++ PD+F+P+ L V+ S L + Sbjct: 627 DLATGNCVGAEALIRWRHPEKGLILPDQFIPVAESTGLIVPMGAWVIRSACPHLKSWREA 686 Query: 570 K-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 R +VN+ + + + + + + + +E+TE + + + Sbjct: 687 GMAPLRLTVNVSVKQFERGGLIQTLESSMRESGVDSRLLEIEVTESVLMQHP-MASDTLR 745 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +L + G I+IDDFGTGY++ LK+L +KID FV + + I +I + Sbjct: 746 ELSRMGILISIDDFGTGYSSLSYLKKLPVYKLKIDRSFVTTLPVDPDMLAITTAIVTMGS 805 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 A L +AE VE+++Q +L +LG +QGY RP P Sbjct: 806 ALRLKTIAEGVESREQLDILRRLGCDEIQGYYYSRPLP 843 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 91/450 (20%), Positives = 185/450 (41%), Gaps = 24/450 (5%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRID 358 + + + + + R A D LT LPN ++ E + D Sbjct: 478 LGEITHYVAIFSDLTERKAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVR----D 533 Query: 359 ------------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + ++ G ++ + +M E L + G E +++L Sbjct: 534 NQRLALLLLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIILLP 593 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 G + + I +N L + + + + L+ Sbjct: 594 VISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYPDDGRDYETLVRNADAAMY 653 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 + + + ++ + + + + + +R AL++ + +L+ QP + G + Sbjct: 654 HAKSSGRN-SYKFYTADLNARAREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAE 712 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNL 579 ++ G++ P +F+ + + + V+ + L ++NL Sbjct: 713 ALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINL 772 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L Q ++A ++ + + + A+ +E+TE +A++++ I+ + G R++I Sbjct: 773 SALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSI 832 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR +AD +KID FV+DI + D+ I R+I ++AK ++ VVAE V Sbjct: 833 DDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGV 892 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET +Q L + G ++QGYLI +P P D Sbjct: 893 ETMEQWQFLEQEGCDFVQGYLIAKPLPADD 922 >UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Proteobacteria RepID=Q21RL1_RHOFD Length = 853 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 111/499 (22%), Positives = 192/499 (38%), Gaps = 22/499 (4%) Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY-SLAFILAVLISFSVCLLYM 308 V +LR + + +++ E Y S+ L L + Sbjct: 354 FDATTVERLRINDKRVIDNGERVEADEVSRSLDGSREQTYLSIKLPLRQPDGSIYALCGI 413 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNL 360 + H A DPLTLLPN R L + Q+ + + +DN Sbjct: 414 STDITEHKRSEDAIHQLAFYDPLTLLPNRRFLMERLQQTLKANERQQQCGALLFIDVDNF 473 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ----- 415 + ++ G M +R + L + + L + E +L+L + Sbjct: 474 KDLNDTLGHAMGDELLRQMAVRLSTCTRAEDTLARQGSDEFVLLLCDLSPDLDAALEQTR 533 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 H+ + + F + L Q ++ A Sbjct: 534 HVAQKILQHIAEPYLLETRHYQSTVSIGIAMFGDTPTSRDELFKQADLAMYRAKAEGRN- 592 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDG 530 AL + Q T + + + AL + + +LY QP + + G + ++ Sbjct: 593 ALCFFNPAMQAQVTARTAIEADLHQALARSEFVLYYQPQVNIDGQQFGVEALVRWQHPQR 652 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKN 588 G++ P +F+P+ L +L + + L ++ +VN+ Q + Sbjct: 653 GLVPPLEFIPIAESTGLILPLGRWILSTACRQLVAWAASPEQAHWSIAVNVSARQFRQSD 712 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++ + +PQ + LE+TE + E + + L G R ++DDFGTGY++ Sbjct: 713 FVQTVEQVLRDTGANPQRLELELTESLLVDDVEVVIARMSALKALGVRFSLDDFGTGYSS 772 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL D +KID FV+D+ + DA IV++I L A +L V+AE VET +Q+ L Sbjct: 773 LSMLKRLPLDQLKIDRSFVRDLRHDPQDANIVKAIVTLGFAMNLQVIAEGVETAEQRDAL 832 Query: 709 HKLGVQYLQGYLIGRPQPL 727 LG + QGYL GRP P Sbjct: 833 VNLGCTHFQGYLFGRPAPA 851 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 111/505 (21%), Positives = 192/505 (38%), Gaps = 24/505 (4%) Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 L+ V R + + + + + E ++ + Sbjct: 53 LLDVMMPGMDGFEVCQRLRTNPRLAELPIVMVTALDDRDSRLRGIEAGADDFMSKPFDRA 112 Query: 303 VCLLYMVRIYHRSEWL------NRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 L VR R + A DPLT LPN L + Q Sbjct: 113 E-LRARVRTITRLNRYRRLIETEEQLAYLANYDPLTKLPNRNLLLERLRQTLGRATRTHQ 171 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE-NEKLYQLPGSELLLVLSG 407 + L +DN + ++ G + + + + L + + + +L G E +++ Sbjct: 172 DIAILALDLDNFQMINDGVGHDVGDKVLHEVAQRLTQTVSKIGATVARLSGDEFVVIEES 231 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + M L SR + ++ + + + + E LL + Sbjct: 232 DNLVKDVSEMAQGLLDNLSRSMVIDHHEMVVTASIGISVYPSDGEEAAILLKNADTAMAR 291 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + A + ++ ++++L N +R L +L+LY QP + + G + Sbjct: 292 AKAAGKN-TYQFFKAEMNKAAFERLMLENQLRKVLSNNELILYYQPQIELSSGQLVGMEA 350 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 +L + GI +P KF+P+ + L VL + + T R SVN+ Sbjct: 351 LLRWQHPEFGICSPVKFVPVAEEMGLIVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVS 410 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + N+ I +++P + LE+TE + + ++ G IAID Sbjct: 411 SRQFFRDNLLQIIKEALADSNLNPIYLELELTESVLMAEESGIFELLTEVQNMGVHIAID 470 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR D++KID FVKDI ++ DA I +I +A + LSVVAE VE Sbjct: 471 DFGTGYSSLSYLKRFPLDVLKIDRSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVE 530 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ 725 TQ Q L + +QGY RP Sbjct: 531 TQGQLTFLQQQHCDVIQGYYFSRPI 555 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 123/611 (20%), Positives = 229/611 (37%), Gaps = 32/611 (5%) Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR--MIVSPHFAQILWRRDIAPS 207 P+ + L+L A + + Y R M V+ + +IA + Sbjct: 4 PVHHQPVSPKLRKAHILAVGLALLIATVTLISMEYASLRRNMTVTMQIQMRIMAGNIAQA 63 Query: 208 LGKEKRAFTLSWLAALSVL----LLLLCTPYENDFI----AGYLVPVFFIIFTLGVGKLR 259 L + + LA+L+ +L +N F G L +F ++ V + Sbjct: 64 LVRGEHEVASEVLASLAEAPEIDTAVLYDMQQNRFAEYVRPGSLSRLFDMMVADQVQRHS 123 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEY---SLAFILAVLISFSVCLLYMVRIYHRSE 316 + W + +++ L ++ ++ V L + R + Sbjct: 124 DMHKSEIWQPVVYGGMQVGMLYMRSNMKGLYRQLLWYVGTTVMVMLVTLFAAALLLSRLQ 183 Query: 317 WL----NRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMS 364 R A D +T LPN A + A + + +D+ + ++ Sbjct: 184 RAMLKAEERAGFLANYDTVTDLPNRHAFSRHFHLLLEGARHRRGVLALLVFDLDDFKVIN 243 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + + + L+ + +Y++ G E ++L P ++ + N Sbjct: 244 DTLGHDVGDKLLHLVAQRLMVAAGKKNTVYRVGGDEFAMMLDQPADVENVEAVANRFIRA 303 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + I N+ +G + + E LL + + + Sbjct: 304 LAPPIVLNDRNFYIGVSIGASIYPYDGEDAAHLLRDADAAMYYAKSRGKN-NFQMFSAEM 362 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 +++ ++LL +R AL++ LY QP + + G + ++ G++ P F Sbjct: 363 HHKSSTRLLLETELRVALEEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCPSSF 422 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ + L R VL + R SVNL Q+N+ + ++ + Sbjct: 423 IPVAEETGLIVRIGEWVLREACRQAMEWKALGVPLRMSVNLSGRQFRQENLVQTMTKIIE 482 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 R + + LEITE +AE++ + L G +AIDDFGTGY++ LKR Sbjct: 483 RTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYLKRFPVS 542 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F++DI + D I + +A + L VVAE VET+ Q L + G +QG Sbjct: 543 RLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDMVQG 602 Query: 719 YLIGRPQPLAD 729 YL RP + Sbjct: 603 YLFSRPVSARE 613 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 92/467 (19%), Positives = 191/467 (40%), Gaps = 21/467 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + +++ + + DPLT LPN Sbjct: 812 RKDGQVYPELMSMSAVCDDQQEVSHYIAVFTDISQAKESQEKLDYLSWHDPLTDLPNRSL 871 Query: 340 L--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + A + + C +D+ + ++ +G ++ +R I L ++E++ Sbjct: 872 FCTHLDQAVKHAERKHHSFAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESD 931 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWN--NTGLDMGYGAAWGRFDG 446 L +L G E +L+L R+ M + + I + + + + Sbjct: 932 MLARLGGDEFVLLLEDVADSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPE 991 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + LL + ++ H E ++ Q ++V L +R AL++ + + Sbjct: 992 HGRDALELLQRADSALYRAKQHGRAR-FAYYNEEMTEQAQERVQLSFHLRQALEKKEFAV 1050 Query: 507 YAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QP + + G + ++ + G++TPD+F+PL + +L + + Sbjct: 1051 YYQPQVDLGTGQIVGAEALMRWNSPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQG 1110 Query: 564 ATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 +VNL + +++IA R+ + + + LE+TE + Sbjct: 1111 KAWLDAGYPPLTLAVNLSAVQFAEEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQ 1170 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ ++ L++ G R+A+DDFGTGY++ LK ++K+D F+ D+ + D +V + Sbjct: 1171 TIDLLKSLNELGVRLALDDFGTGYSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTA 1230 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I + ++AE VET Q+ L +LG Y QGY P P + Sbjct: 1231 IVQMGHGLGFDLLAEGVETVAQRDCLAQLGCDYYQGYYCSPPVPACE 1277 >UniRef50_B3E9P2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9P2_GEOLS Length = 805 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 128/742 (17%), Positives = 262/742 (35%), Gaps = 35/742 (4%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCG 70 ++ LA VL+ F++P + + L + + +F +V + C Sbjct: 51 LRWAMLAALFCYVLL-AELFLAPDIDLP--IFHIEQWSLSLKATAIFFAVAFPLVSLPCS 107 Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTF---VVLCACAILRWQLGTRWRYGLTSRYVWQRLFW 127 ++ +L L + + + V+ + + + R W Sbjct: 108 VWRNCRLVIYLQVLLDLLFVTAAIHWSGGVVSWLWPAYLLISLESAFLFEKK----REVW 163 Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 + + + F + L+ L+ A + + F+ Sbjct: 164 GIGMIGAALYGVLLAAEQLDFIATVRMPFMEEESPSILFELLMWLWVAGVNTVVSFFGAF 223 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA---GYLV 244 M Q + + A + + LL L + G + Sbjct: 224 LMDKIRSDHQKVQQSQEALTGFIATAHDLIFCCRQDGTLLYLNQVGQDMIGPLEGEGGDI 283 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVL--ISF 301 +F + G G L F +T + ++ L V L L+ Sbjct: 284 SLFNLTDEEGKGLLARQFEKVT---RRIDAGHFEMRLLSPAVGRILDLEVSLSTCCNDVP 340 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFC 353 + + R A D LT LPN L +Q + Sbjct: 341 DQVIWGVCHDITERNLAQRELIKLAHHDVLTGLPNRILLHDRLQQARAFAHRMNSRFALL 400 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G + +R I + L +E + + ++ G E ++++ Sbjct: 401 FLDMDRFKIINDTLGHAVGDDLLRMIAQRLKACFRETDTVARIGGDEFVVLMLNVTDRTD 460 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + L ++ L + + +++ ++ ++ + + A Sbjct: 461 ICTLNDKLLQELAQPFMIRGHELFVTTSGGVCTYPDDEDDVEIMMQKADIAMYHAKALGR 520 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLK 527 + + + ++++ + N++R LD+G+ LY QP + + ++ Sbjct: 521 N-NIQFYNDGMDQNSSRRFTIANSMRRGLDRGEFRLYYQPKLDVSSDCIVATEALVRWQH 579 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQ 586 + G++ P +F+ L + L VL + + +G R +VNL L Sbjct: 580 PELGLLAPTEFIQLAEESGLIVELGEWVLREACRQNMVWRQEGMRGLRVAVNLSGYQLQH 639 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + ++ + + + EITE N + ++ + ++ G I+IDDFGTGY Sbjct: 640 SRLVETVRKVLDETGMPGELLEFEITESVIMQNPDYAVEVLNEITNLGIHISIDDFGTGY 699 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKR + +KID FV+D+ NT DA I +I + + +L V+AE VET+QQ Sbjct: 700 SSLAHLKRFSVNTLKIDKSFVRDVENNTTDAAIASAIIAMGSSLNLKVIAEGVETEQQMD 759 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L +QG+LI RP P Sbjct: 760 FLRDNNCDQVQGFLISRPLPAD 781 >UniRef50_C6WYR4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYR4_METML Length = 681 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 100/561 (17%), Positives = 201/561 (35%), Gaps = 23/561 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGY 242 ++ +A R + E + L +L L C P ++ Sbjct: 111 LLRVMRYAIERKRAE-LELRQSEAKVRALYEAVPDLLLFLDLEGRFLECKPAKDFQTHIE 169 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + L + + + + S + + + Sbjct: 170 PEHFLGKTIHEALPEGIAEQAMLCLEKVVVGSGITSFEYQMALPQGVS-NYESRFIRASE 228 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCC 354 +L +VR S+ ++ H A D LT LPN ++ Q + Sbjct: 229 EQVLCIVRDISESKRTQQQLHFLAHYDTLTGLPNRLLFNESLHQAQTHANRTSDTIAVMF 288 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G + ++ + + ++E++ + ++ G E +VL E Sbjct: 289 IDLDRFKNINDTLGHGIGDKLLQQVGNRISLCIRESDTVARMGGDEFAVVLVNVREESDA 348 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + +G + Q+ LL + + Sbjct: 349 AVVAEKIIDALRLPFMVGEHEVFVGASIGITFYRPGQDDRDVLLEKADVAMYHAKERGRN 408 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 + +++++ N +R ALD+ + +LY QP + +L Sbjct: 409 -NFQFYSSEMDAVAYERLVMENHLRHALDRKEFILYYQPQIAVDGGRVTAVETLLRWQHP 467 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 D G++ P +F+ L+ + L VL++ + R +VNL Sbjct: 468 DRGLVAPGEFISLLEESGLIVPVGKWVLKTSCQQGRIWYDAGTPVRVAVNLSVRQFKHPG 527 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + P+ + LE+TE +A + + QL G +AIDDFG+G ++ Sbjct: 528 LVADVAEILAESGLPPELLELELTESMFMDSATGDVNKLTQLKALGVSLAIDDFGSGASS 587 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK D +KI FV ++ N D+ I ++ LA+A + + VAE VE QQ L Sbjct: 588 LAYLKDFPVDTLKICQSFVLNLPHNNDDSAIASAVLGLAQAMNFTSVAEGVENDQQANFL 647 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + Y QG+L +P P+ + Sbjct: 648 RERRCDYFQGFLFSKPLPVEE 668 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 95/473 (20%), Positives = 182/473 (38%), Gaps = 20/473 (4%) Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPL 331 + + + + + + + + + + A D L Sbjct: 166 IQHESHVVARDGERLLVEWHGNTVRNGQGQVEYFFALGLDITERRRTQAQLEHIAHYDLL 225 Query: 332 TLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN L+ ++ + L +D + ++ G +R + L Sbjct: 226 TGLPNRTLLQNRISHALDVARRRDRQVAILFLDLDRFKVVNDSLGHAYGDELLRQVSDRL 285 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW-NNTGLDMGYGA 439 ++E + L + G E ++++ + L + + + N + +G Sbjct: 286 RRRLREEDTLARWGGDEFIVLVDEVDDPQGLSLLAEGILAELAEPYRLSNGQEVFVGGSI 345 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + + + L+ + Q+ ++ ++ L ++R AL Sbjct: 346 GISLYPQDGRSAEQLIMKADTAMYQAKDQGR-SNYQFYTSALTLAANDRLALETSLRHAL 404 Query: 500 DQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 ++ + L+ QP + G + ++ D G+ PD F+P+ + L L VL Sbjct: 405 EREEFTLHYQPRVRTQDDVMIGMEALVRWHHPDKGLTAPDAFIPMAEETGLITPLGLWVL 464 Query: 557 ESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + + T + +VNL L Q ++ +I + + + ++ LE+TE Sbjct: 465 RTACRQAQTWMRLYGEPIHMAVNLSMRQLRQPDLVSQIDAILRDTGLPASSLELELTESV 524 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + ++ + +L G R+AIDDFGTGY++ LKRL D +KID FV DI + Sbjct: 525 LMAGDGHTLTALAELKALGVRLAIDDFGTGYSSLAYLKRLPIDALKIDRSFVSDIPHDAS 584 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D I +I +A+ L VVAE VET +Q A L K G QG+ P Sbjct: 585 DMAIASTIIAMARTLGLEVVAEGVETPEQLAFLKKEGCDSYQGFGFSPPVDAQ 637 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 95/499 (19%), Positives = 186/499 (37%), Gaps = 20/499 (4%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 R + + + L + ++ + Sbjct: 636 PRMLSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHGQVTHY 695 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + + R A DPLT LPN + + L + Sbjct: 696 VGVFTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLLLDL 755 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ YG + ++ + + L +++++ L +L G E L++ + + Sbjct: 756 DRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHDLRHDDDAARL 815 Query: 418 VNILNS-RQIHW---NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L S W + +G + + T Q LL ++ + Sbjct: 816 ASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRAKGDGRGV- 874 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + ++ +++ + +R AL G LLL+ QP + G + ++ + Sbjct: 875 YRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDPEQ 934 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNI 589 G++ P +F+P+ L VL + +VN+ P Q ++ Sbjct: 935 GLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQADL 994 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 A +++++ + P + LE+TE ++ +++L G +AIDDFGTGY++ Sbjct: 995 ATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYSSL 1054 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKR D++KID F+ DI + D I +I + + + V+AE VET +Q A L Sbjct: 1055 ASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAFLQ 1114 Query: 710 KLGVQYLQGYLIGRPQPLA 728 + QG+L RP P Sbjct: 1115 QRNCDRYQGFLRSRPLPAQ 1133 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 97/465 (20%), Positives = 178/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T Y + + V + + S R A DPLT LPN A Sbjct: 177 RKDGTIYPKQMRITAICEDGVQLSHFVAVFSDISESRAQAERLEYLARHDPLTNLPNRLA 236 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + + + +DN + ++ G + + R L M + Sbjct: 237 LDAHLDTLLEGATPGINRLALLIIDLDNFKTINDSLGHHAGDRLLSELARRLGAQMDLTK 296 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 +L++L G E ++V+ E + +V L + + L + + Sbjct: 297 RLFRLGGDEFVVVVDQLINEEAVIELVQQLAGGIGDPCNIDGHVLHCTSSIGISLYPEDG 356 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 Q L+ + A+ E ++ K++ L + + AL + L+LY Sbjct: 357 RDAQALIRNADTAMYYAKANGRN-NHKFFTEPMNAAANKRLHLESELWCALAENQLVLYY 415 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + ++ G++ P +F+P+ + L VL + + Sbjct: 416 QPQIDLLSGKVVGVEALVRWRHPLRGLIPPAEFIPVAEECGLILPLGHWVLLTACRQARE 475 Query: 566 HPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VN+ Q + + + + LEITE ++++ Sbjct: 476 WLDAGIDMGEMAVNISAHQFRQPEFISSVQAILAETGLPTGRLELEITESTIMHEVDAAI 535 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + QL G ++AIDDFGTGY++ L+R D +KID F+ D+ T+ A +V SI Sbjct: 536 QTLAQLRAMGIKLAIDDFGTGYSSLAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIV 595 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L ++ L +VAE VE Q L L + +QG+ +P + Sbjct: 596 LLGRSLGLQLVAEGVENFAQAEFLRTLECERVQGFHFYQPVCAEE 640 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 99/458 (21%), Positives = 177/458 (38%), Gaps = 21/458 (4%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 +L + S+ R A DPLT LPN A E Sbjct: 113 IAVLRDAEGQIENHVANFSEMEASKEYADRLAYLAYHDPLTNLPNRLAFESQLAQALRGC 172 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + +DN + ++ G + ++ + L ++ ++ + ++ G E ++ Sbjct: 173 ERDNRQLALMLIDLDNFKNINDTLGHHVGDELLQKVALRLRESVRSSDLVARIGGDEFVI 232 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 VL E+ + N + + L F + LL Sbjct: 233 VLPEIESPLTAARVANKVQQNMADSYRIADHALYATPSIGISLFPIDGSDANTLLRNADT 292 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD-----QGDLLLYAQPIR--- 512 + ++ +++ + N +R A+ + L+ QP Sbjct: 293 AMYHAKDAGRN-NHQFYTARMNEAAGERLHMENELRQAISAISPGDSEFSLHFQPQVQTA 351 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-K 571 + G + +L G ++P +F+ + + L V+ + + + Sbjct: 352 TGQVFGLEALLRWNNPIFGQVSPMRFIAIAEETGLIQPLGDWVIWETCRLIRQMKQHGIE 411 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R ++N+ L +N+ + Y + P+ + LEITE A N E+++ ++QL Sbjct: 412 DIRIAINISAQQLRHENLLLLVRGALSCYDLRPEDIELEITESTAMQNPETTLSILDQLA 471 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G +AIDDFGTGY++ LK L +K+D FVKDI + DA I + L + Sbjct: 472 AMGIVLAIDDFGTGYSSLAYLKHLPIQRLKLDRSFVKDIEIDANDAAICTATIALGHSLG 531 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L +VAE VET+ Q+A L LG LQGYL +P P + Sbjct: 532 LELVAEGVETEAQRAFLASLGCDTLQGYLYSKPMPFEE 569 >UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMK7_THIDA Length = 738 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 94/438 (21%), Positives = 183/438 (41%), Gaps = 17/438 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + + H QA D LT LPN + L +D Sbjct: 286 GVAKDVTERKQAEETVHYQAYHDLLTGLPNRALFRDHLALMLAQAKRSHKTLAVLSLDLD 345 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + + ++ G + + ++ L ++E + L +L G E ++L + G ++ + Sbjct: 346 HFKVINDSLGHTIGDELLLAVGARLRQCLREGDTLARLGGDEFAVLLPTLLSRGDVEQIC 405 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + SR ++ + + + E + L+ Q Q+ A L Sbjct: 406 RKIIQVLSRPVYVKGHEIYISVSIGACVAPDDGEMIDSLIRQAEIAMYQAKAQGRSR-LQ 464 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 E + ++++ + +R AL + + +L+ QP + E G++ +L G Sbjct: 465 FWEAGMQAPYSERMQIEADLRRALARNEFVLFYQPQVDTVSGEVRGFEALLRWWHPQRGF 524 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAG 591 ++P +F+P+ + + VL +A R SVN+ L + Sbjct: 525 LSPAEFIPVAEESGVIVPIGDWVLREASAQMAEWRRAGLPQVRLSVNISARQLESPDFVE 584 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++R + + + Q + LEITE + E++ + +L G R+AIDDFGTGY++++ Sbjct: 585 SVMRAVQVHALDGQQIELEITESLLMRDFEANAIKLGRLSASGIRLAIDDFGTGYSSFKY 644 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L R +KID F++++ + IV ++ + + +L+VVAE VETQ Q A L ++ Sbjct: 645 LSRFPIHTLKIDQSFIQELER-EENLSIVNAMVAMGRGMNLNVVAEGVETQSQLACLQQM 703 Query: 712 GVQYLQGYLIGRPQPLAD 729 +QG+ P D Sbjct: 704 QCHEMQGHYYSVPMSGHD 721 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 90/464 (19%), Positives = 173/464 (37%), Gaps = 20/464 (4%) Query: 284 GVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 T Y ++ + + + + R A D LT LPN Sbjct: 481 KSGTIYPEILTISAIDFKKGQQPSGYVGVFADITSLKETEARLDHLAHYDALTELPNRLL 540 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + ++ + L +D + ++ G + + I L +++ + Sbjct: 541 FRERLIHSLLMSERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGD 600 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ G E L+L + + +V + S + I N+ L + N Sbjct: 601 TVGRISGDEFCLILEDIQDVTDVVPIVEKILSVFSQTIQINSHMLQISASIGVAISPDNS 660 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL ++ ++ Q + + + +R AL+Q + Sbjct: 661 NDADALLSFSDSAMYEAKEAGRN-TYKFYTAEMTQQALEHSFVQSALRDALEQSQFFVTY 719 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G++ PD F+P+ L +L + + Sbjct: 720 QPQLRIKDYSMVGVEALVRWQHPERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQ 779 Query: 566 HPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 ++ R VN+ L ++ +I K + + LE+TE + + ++ Sbjct: 780 WLNEQVNFGRIYVNVSATQLHDESFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAI 839 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + + G +AIDDFGTGY++ LK+L D +KID F++DI + D I ++ Sbjct: 840 NVLSSFKEIGIELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVI 899 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + KA +L V+AE VE+Q Q L +QGYL P Sbjct: 900 AMGKALNLEVIAEGVESQIQADFLLDKECTEVQGYLYAHPLTAD 943 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 103/442 (23%), Positives = 176/442 (39%), Gaps = 17/442 (3%) Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-------KSFC 353 + + A D LT LPN + EQ + Sbjct: 348 QGGGWVATFEDITEWLEAQAKISHMARHDALTGLPNRVLFHEQLEQGLRRTGSGDQLAVL 407 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 CL +D+ + ++ G + ++ + R L + E++ + +L G E +V G E Sbjct: 408 CLDLDHFKDINDSLGHPIGDALLKEVGRRLKATVGESDTVARLGGDEFAVVQIGRSEEAA 467 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + L S ++ + +G + LL ++ A Sbjct: 468 ARCLAGRLVEVISAPYEIDDHQIVIGVSIGISLSPQDGSNADELLKNADLALYRAKADGR 527 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 E + + + LL +R AL + + Y QPIR+ ++ +L Sbjct: 528 G-TYRFFETGMDARAQARRLLEMDLRAALQRDEFQPYYQPIRDVASGRVVVFEALLRWNH 586 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G++ P F+PL + L + VL S AT P +VNL P+ Sbjct: 587 PQRGLIAPINFIPLAEETGLIVQLGEFVLRSACTDAATWPD---DVDVAVNLSPVQFRNP 643 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ + + + + LEITE N+E+++ + +L G RI++DDFGTGY+ Sbjct: 644 NLIASVTAALTVSGLPARRLELEITESVLLQNSEATLTTLHELRAMGVRISLDDFGTGYS 703 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+ D IKID FV ++ T I+R++T L ++ + AE VE Q L Sbjct: 704 SLSYLRSFPFDKIKIDRSFVSELATREDSMAIIRAVTGLGRSLGIVTTAEGVENDAQLEL 763 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + G QGYL +P+P +D Sbjct: 764 LRREGCTQAQGYLFSKPRPASD 785 >UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE8_9CYAN Length = 990 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 92/439 (20%), Positives = 173/439 (39%), Gaps = 19/439 (4%) Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDN 359 +R + + A D LT LPN EQ + + L +D+ Sbjct: 540 LRDITERKQAEEQLRHSAFYDALTNLPNRALFMDQLEQAITQTKTLNQTSFAVVFLDLDS 599 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 +F++ G ++ + +I L ++ + L +L G E +L E + +V Sbjct: 600 FKFVNESLGHIIGDQLLIAIADRLETCLRSGDILARLGGDEFTFLLKDIEQVSQAITVVQ 659 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + ++ L + + +L + Sbjct: 660 NIQHKLTFPFDLSSHQLFSNASLGIALISPDYTYPEEVLRDADIAMYSAKQRGKN-CYAI 718 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 + ++ ++ L +R A +Q D L+Y QPI + G++ ++ G++ Sbjct: 719 FNSQMRKKSQHRLQLETDLRYAWEQQDFLVYYQPIVCLQTHQIVGFEALIRWQHLTKGLI 778 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIA 590 +P +F+P+ + L VL++ L + + SVNL + N Sbjct: 779 SPYQFIPVAEETGLIIELGSWVLKTACHQLKAWTRTNPRMQHLKMSVNLSSRQIQDYNFV 838 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 +I ++ I+PQ + LEITE N E + Q+ ++++DDFGTGY++ Sbjct: 839 KKINQVMTETQINPQNLKLEITESILMENPEDVKEKLIQIRSQNIQLSLDDFGTGYSSLS 898 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L + +KID F+ + N + IV++I LA + V+AE +ET + L Sbjct: 899 YLHNFPINTLKIDRSFIVRMNLNPENTAIVQAIITLAHTLGMDVIAEGIETVEHLKHLQA 958 Query: 711 LGVQYLQGYLIGRPQPLAD 729 L +Y QGYL +P + Sbjct: 959 LECEYGQGYLFSKPVSAIE 977 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 99/438 (22%), Positives = 177/438 (40%), Gaps = 17/438 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-------GKSFCCLRID 358 + + + QA D LT LPN L Q E A + L +D Sbjct: 276 VGTFLDVSELKRKEAQIVHQATHDELTGLPNRMGLRQRMEDHALKGGPDARLAVLYLDMD 335 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS-----GPETEGR 413 N + ++ G + +R++ L+ + + + +L G E +++L E Sbjct: 336 NFKTVNDSLGHAVGDELLRAVAGRLVGMAPRRDMVARLGGDEFVVLLPLSAEGDGELAET 395 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + +R + + L + + LL ++ Sbjct: 396 ESARIQDSFTRPFNAADHELYVMPSIGISVAPEDGRDPATLLKNAEIAMYRAKEQGGAR- 454 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDG 530 + ++ T+++ + +IR L+ + +++ QP I + G + ++ + DG Sbjct: 455 FRRFTQAMNDDVTRRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQVTGMEALVRWARPDG 514 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 ++ P +F+P+ L +VL + R +VN+ Q ++ Sbjct: 515 TLVPPLEFIPVAEDTGLVVALGERVLRDACIQTRRWTDELGPLRIAVNISARQF-QPDLL 573 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 R+ + P + LEITE + +S+ +E+L G IAIDDFGTG+++ Sbjct: 574 DRVQAALAESGLPPSQLELEITETTMMRDLPTSVAILERLAAQGISIAIDDFGTGHSSLY 633 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK D IKID FV+D+ + DA IV +I + + SL+VVAE VET Q L Sbjct: 634 YLKNFPIDTIKIDRSFVRDVPGDEGDATIVSTIVTMGRNLSLNVVAEGVETDDQLGFLRA 693 Query: 711 LGVQYLQGYLIGRPQPLA 728 G + +QGY +P P Sbjct: 694 HGCREVQGYYYSKPLPAD 711 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 95/464 (20%), Positives = 176/464 (37%), Gaps = 21/464 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + ++V++ + L + RR A D LT LPN Sbjct: 219 RKDGSVFPKMMTVSVVLDRAGDIDFYLANFVDVSHYKETERRIEHLAHHDTLTGLPNRLH 278 Query: 340 LE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ A + L +D + ++ G + + + L +++ + Sbjct: 279 LQVFLEQSILIAKRMSEQLAVVFLDLDRFKTINDTLGHPVGDDLLIQVADRLKTSVRQYD 338 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +++L G + + + ++ L + GN Sbjct: 339 MVARLGGDEFVMILRGHDMPSVASAVAEKIRLHLNQPFQIGQHTLRTATSIGIALYPGNG 398 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 E + L+ + + ++ +++ L N + AL+ LY Sbjct: 399 ERMDDLMKHADTAMYFTKSEGGN-GFCFFSSDMNLHAHEKLELENLLHGALENQQFELYY 457 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + +L + G ++P F+PL N VLE+ + + Sbjct: 458 QPQLSLPEQQVIGAEVLLRWHHPEKGFISPAVFIPLAEATNQIGAIGEWVLENACRQASQ 517 Query: 566 HPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 D R VN+ KN+ + R+ + + LEITE ++ + + Sbjct: 518 WLRDGLPLPRIGVNVSGRQFQDKNLFTLVKRVLAETGLPADRLELEITETAVTASPDEAA 577 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD--AMIVRS 682 ++ L + G +A+DDFG GY++ +L+ L D +KID FV+DI I + Sbjct: 578 RLLQSLRECGIMVALDDFGQGYSSLGQLRDLPIDRLKIDAAFVRDITDEPGHPGGAIAAA 637 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 L SV+AE VETQ Q + L G +QGY +P P Sbjct: 638 TIGLGHNLGFSVIAEGVETQAQLSFLMAHGCDEVQGYYFAKPMP 681 >UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=2 Tax=Cyanobacteria RepID=B0C4Z3_ACAM1 Length = 754 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 112/564 (19%), Positives = 209/564 (37%), Gaps = 27/564 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 I Q + + W AA+ LL + + GY V F Sbjct: 155 IDERQLVQQKLQESETRLESILNSLDDVVWSAAV-EEFQLLYLNPAAEAVHGYPVSSFLS 213 Query: 250 IFTLGVGKL----RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISFS 302 L + + R+ ++ + LN L+ L ++ Sbjct: 214 NPDLWLEVVHPADRHQMIHFFDQLLVAGSLNIEYRILRPDGEIRWLKNRGHVITGDQGRP 273 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA-----PEQEA----GKSFC 353 L ++ + + A D LT LPN + + Q + Sbjct: 274 HRLDGIIYDITEQKRAQAQLIHDAFHDELTGLPNRNLMMERISQSLKRQHRTSDYQFALL 333 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G ++ + +I L ++ ++ + +L G E ++L G + Sbjct: 334 FIDLDRFKIINDSLGHIVGDQLLVAIAHLLENCVRTSDTVARLGGDEFTILLDGIQGIED 393 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 H+ + + G + LL ++ + Sbjct: 394 AIHVAERILETLKSPFQVGEHSVFTGSSIGIAYNSVQYDDPTLLLRDADIAMYRAKSLGK 453 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLK 527 + QT + L +R+A+D+ + +LY QPI + + + ++ Sbjct: 454 G-CFVVFSPEMHAQTLSLLKLERDLRSAVDRQEFVLYYQPIIDLQSGDLTDVEVLVRWQH 512 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTL 584 D G++ P +F+PL + L VL+ + L + +FSVNL L Sbjct: 513 PDRGLVMPSEFIPLAEETGLIVEIGQWVLQEACQTLRDYQQQFASATELKFSVNLSSEQL 572 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 N + R+ + + + + LE+TE S+ E + ++QL I++DDFGT Sbjct: 573 QDPNFIQTVDRVLSQSGLDGRYLKLELTESMLMSHEEKHIKTLQQLRDRSITISLDDFGT 632 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L R D +KID FV +++ DA IV +I LA+ ++ V+AE +ET+++ Sbjct: 633 GYSSLSYLYRFPLDTLKIDQSFVSRMISEPKDAEIVNTIISLARTLNMDVIAEGIETEEE 692 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L KLG + QGY P Sbjct: 693 VLHLKKLGCERGQGYWFSPPMSQE 716 >UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N514_9GAMM Length = 1084 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 86/463 (18%), Positives = 174/463 (37%), Gaps = 18/463 (3%) Query: 280 NFLQGVETEYSLAFILAVLISFS--VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 ++ + + + S +++ A D LT LPN Sbjct: 608 EMVRKDGQVFWCGISGKAIDAGSPKAGTIWLFEDITIQRQNEEHLTRLASIDGLTGLPNR 667 Query: 338 RALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 E + L +D+ + ++ G + + + ++E Sbjct: 668 AVFTDRVEHAIHKSMRNSGRLAVFFLDLDHFKHINDSLGHKAGDILLTEVAGRIKACVRE 727 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDG 446 + + +L G E L+L + + + + + NT +++ + Sbjct: 728 GDTVARLGGDEFTLLLEDVRSAEYVGKVAEKVIKSMTQPYQIENTEVNISPSIGISLYPA 787 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + L+ + ++ + K++ + +R ++Q DL L Sbjct: 788 DGRDVDMLVRNADAAMYHAKKVGRN-NFQFYSAEMNAEAAKRLAMETALRRVVEQQDLHL 846 Query: 507 YAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 + QP N + G + +L G ++P +F+P++ + + +L Sbjct: 847 HYQPQVNLQTGKLVGAEVLLRWQSEQWGNVSPAEFVPMLEDTGMITQVGEWILRQACATY 906 Query: 564 ATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 +VNL ++A I RL + + LEITE + E Sbjct: 907 LEWSERLPDNFMMAVNLSGRQFKGGSLAAFIRRLLDETGMPAAHLELEITESMLMDDTEL 966 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + +L +AIDDFGTGY++ LK+ +++KID FV+D+ ++ DA IV + Sbjct: 967 ATITLAELSAMNISLAIDDFGTGYSSLSYLKQFPLNVLKIDSSFVRDVTSDKDDAAIVDA 1026 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I ++ + L VVAE VET +Q+ L + + QG+L + Sbjct: 1027 IMAMSNSLGLKVVAEGVETAEQRQYLLRHDCRLAQGFLFSKAV 1069 >UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Rhizobium RepID=B6A0H8_RHILW Length = 730 Score = 628 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 108/573 (18%), Positives = 199/573 (34%), Gaps = 26/573 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 +R I A+ L + + W + LLC Sbjct: 140 AATTLLAFSRDITERKQAEDAINSVRTQLLSVLQTMPDMIW-VKDMNGVYLLCNHTFERL 198 Query: 239 IAGYLVPVF----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 V +F + + L + Q L Sbjct: 199 TGMAEAEVVGKTDLELFDIERARFFQQSDKAAIKAGECILSDEEWVVSQENGQTILLETR 258 Query: 295 LAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 +I V +L + R ++ H A DPLT LPN Q Sbjct: 259 KVPVIDAAGEVVGVLGVARDVTELNVSRQKIHQMAFYDPLTSLPNRSLFNDRLRQMITSA 318 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + ID+ + ++ G + + L +++++ + +L G E + Sbjct: 319 GSRGQRAGLMLIDIDHFKVVNDTMGHPVGDDLLCQAAARLNASVRDHDTVARLGGDEFAI 378 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L L + N + + + + + + + L+ Sbjct: 379 LLPDISQGDDLGRIANNILDKFRERFLLDGQEVFVSCSVGIALYPDDSADANDLVKYADS 438 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 + + + ++ +++ L + +R A+++G+L L+ QP + Sbjct: 439 AMYLAKRSGRN-SFRFYSKDLTASAEERMRLESDLRRAIERGELELHYQPKVLLDSGAMV 497 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 G + +L + G++ P +F+P+ L VL + A D + P + + Sbjct: 498 GCEALLRWRHPEMGMIPPVRFIPVAEDTGLIVELGRWVLHEACQTAAELNADSRSPHKVA 557 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +NL + I ++ + V +EITE + ++ + +L GF Sbjct: 558 INLSVKQFQSAGLVKSIAQIIDETGCRAEWVEIEITESLLLDQKDETLQALSELRSMGFS 617 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IAIDDFGTGY+ L R D +KID F+ T+ + +V++I +A+ SVVA Sbjct: 618 IAIDDFGTGYSALNYLARFPIDTLKIDRSFIN--STDRRNEELVKAILSIARCLGQSVVA 675 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET +Q A L G QG+L + P AD Sbjct: 676 EGVETAEQAAFLVANGCGTAQGFLYSKAVPKAD 708 >UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607V4_METCA Length = 819 Score = 628 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 96/445 (21%), Positives = 172/445 (38%), Gaps = 19/445 (4%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + + + A DPLT LPN R + Q + S Sbjct: 370 THYVVTFVDISERKRAQQEIEQLAYFDPLTGLPNRRLFLERLNQAIGESCVNGSRCSLLF 429 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE--- 411 + +D + ++ G + +R + L + + +L G E +++L+G + E Sbjct: 430 VDLDRFKHLNDARGHTVGDQLLRKVAERLSEGVGRGGMVARLGGDEFVILLNGLDEEFES 489 Query: 412 -----GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + ++ R ++ + + + ++ LL ++ Sbjct: 490 ACRRTMDVAENLRVILQRPFVLSSGQHYVTASIGTAIYPFDTDSADDLLKAADMAMYEAK 549 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILA 524 A + + + ++ L + AL++ + LY Q + G + +L Sbjct: 550 ASGRN-TVRAYASTMQAAAETRLTLERDMHAALERREFRLYLQSQVDGNGRIVGAEALLR 608 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 GI+ PDKF+ L + L V E + SVN+ P Sbjct: 609 WEHPTEGILLPDKFIALAEETGLILPIGEWVFEQVCHENVRLSQAGHRLSLSVNISPRRF 668 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q + + R+ KR +P +I EITE S+ + ++ + L + G R ++DDFGT Sbjct: 669 QQADFLDHVQRILKRTGANPHDLIFEITEGLLVSDFDDAIAKMSFLERLGIRFSVDDFGT 728 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL +KI FV D+ + D +V++I +A +L VAE VET+ Q Sbjct: 729 GYSSLAYLKRLPLSELKIAQTFVNDLPDDPSDVALVQTILSMAYHLNLETVAEGVETRAQ 788 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L G QGY P P + Sbjct: 789 LEFLKARGCTRFQGYYFSPPLPATE 813 >UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensors n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE1_9CYAN Length = 1090 Score = 628 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 92/447 (20%), Positives = 180/447 (40%), Gaps = 20/447 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSF 352 + LL + + + + A D LT LPN + Sbjct: 626 TEYLLCIGEDITKRKQAEDQLRHHAFYDTLTNLPNRALFLNRLAHSIKQVQQTSGELFAV 685 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +DN + ++ G + + +I R L ++ + L +L G E ++L Sbjct: 686 LFLDLDNFKRVNDSLGHQIGDQLLIAIARRLEGCLRSRDTLARLGGDEFTILLEQINNIT 745 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGR-FDGNQETLQPLLGQLSWLAEQSCAH 468 + L+ + + + + +++ + LL ++ Sbjct: 746 DAIKVARHLHQQLMLPFNLSGNEVFTNVSIGIALSCSRHEQHPEELLQNADSAMYRAKEM 805 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 A + + Q +++ L + +R AL+ + +Y QPI + E G++ ++ Sbjct: 806 GKG-AYAVFDTRMHRQAVERLQLESQLRRALELNEFQVYYQPIVSITTGEVIGFEALIRW 864 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPL 582 L G ++P F+P+ + L ++ VL + L SVNL Sbjct: 865 LNPYKGFISPALFIPVAEEIGLISKIGQWVLYQACEQLQVWRKQFPLFKNLTVSVNLSSQ 924 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L + ++ +I ++ + + LEITE N + ++ + Q+ ++++DDF Sbjct: 925 QLREPDLLEQIDQVLATTGLPSHCLKLEITESLLIENYDQALKILRQIQDRNIQLSLDDF 984 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L R + +KID FVK + N + I+++I LA A +++ +AE +ET Sbjct: 985 GTGYSSLSYLHRFPINTLKIDRSFVKRLKQNHENTAIIKAILRLANALAMNTIAEGIETV 1044 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L LG +Y QG+L + D Sbjct: 1045 FQLEKLKGLGCEYGQGHLFSKALDAQD 1071 >UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDV9_DESAH Length = 708 Score = 628 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 102/584 (17%), Positives = 208/584 (35%), Gaps = 37/584 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 ML Y M+ + + L+ + + +K A +W L + C+P Sbjct: 118 VMLGYRAKYMLRAGQAFRELYLNENR-LIKTQKLAKLGNWQIDLVNNVFS-CSPEACSLQ 175 Query: 240 AGYLVPV-------FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + F I ++ N A L N + + Sbjct: 176 GLNPMDKPVTFDGFFEPIIANQQDMVKQTISNAVKAKENFSLNYQVMNLNGTQKHILNQG 235 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + +L +V+ + + R A D LT L N Sbjct: 236 EVFVDDNGVPEIMLGVVQDLSQLKQAEERIRFLAFYDGLTGLANRMLFMDRLDTQIKKAT 295 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK------------ 392 + L +D + ++ G + ++++ TL +++ + Sbjct: 296 RYNQKFALFFLDLDQFKKINDTLGHHIGDLLLKTVAETLKSCIRKTDTAARRDKDESGSM 355 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++LS ++ + + + + F + Sbjct: 356 IARLGGDEFTVLLSDIKSPENSAIIAQRILDAIPEAYSIEGKEVSVTTSIGISVFPADGS 415 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 T + LL + E ++ ++ + ++ + + +L+LY Q Sbjct: 416 TPETLLKNADSAMYHAKDRGKN-NYQFYMESLNRAAIERFSMERDLKKSFARDELVLYYQ 474 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P +++ G + ++ + G++ PDKF+PL + L + VL++ + Sbjct: 475 PQIRFADRKIVGAEALIRWIHPHKGMIPPDKFIPLAEETGLVIDINKWVLKTASRQNDEW 534 Query: 567 -PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R ++NL L +NI I K + + LEITE + + +M Sbjct: 535 TRAGLNSIRVAMNLSGYKLATQNIIQDIKEALKTVKFDSKKLELEITENILMQDDDETMQ 594 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +Q+ + IA+DDFGTGY++ L + IKID F+ + +I+++I Sbjct: 595 IFQQIREMNISIALDDFGTGYSSLSYLTSFPVNTIKIDRSFIMGSALQVDNRVIIKAIIA 654 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + +++AE +ET++Q LL + G QGY + P P + Sbjct: 655 MGHSLGKTIIAEGIETKEQFDLLKRYGCDEAQGYYLSPPIPADE 698 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 113/489 (23%), Positives = 192/489 (39%), Gaps = 23/489 (4%) Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 V R+ WA L Q FL + V + S + M Sbjct: 407 VELCRHLDEQGGWAGELLLRQRNGQLFLAW-------LTLRTVRLGTSTYHVCMFGDLSD 459 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---------FCCLRIDNLEFMSR 365 + RR A D LT LPN L L ID+ + ++ Sbjct: 460 RQAAERRIQYLAYFDTLTGLPNRALLTDRANMALRGVEGDAAPALALLLLDIDHFKHIND 519 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ 425 G ++S+ + L ++E + + + G E +++L IL Sbjct: 520 TLGHSTGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDANASRAASVAQEILRRLG 579 Query: 426 IH--WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + + L ++ L + Sbjct: 580 FVCRIGEHDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAKQEGRN-TLRFFFPEMQE 638 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLP 540 +T + V L +R A+++G++ L+ QP + + G + +L G ++P +F+P Sbjct: 639 RTLRHVQLTGALRGAVERGEMQLHYQPQVDLQTGELSGVEALLRWTHPLFGAVSPGEFIP 698 Query: 541 LIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L VL + + LA +VNL L +A +I + Sbjct: 699 LAEESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSVLQFNLPGLAQQIASILSE 758 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P +E+TE A + E+++ I++LH G ++++DDFGTGY++ LKR + D Sbjct: 759 AGVPPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGYSSLAYLKRFRLDR 818 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KIDG FV+D ++ D IV +I +A++ L+ VAE VET Q ++ LG +QGY Sbjct: 819 LKIDGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLEVIRALGGDAVQGY 878 Query: 720 LIGRPQPLA 728 I RP P A Sbjct: 879 WISRPLPAA 887 >UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2A5_METFK Length = 722 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 100/469 (21%), Positives = 193/469 (41%), Gaps = 24/469 (5%) Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 T Y + + + + + + + L + AL D LT LPN R + Sbjct: 246 KDGTLYWVHTTIVPFLGEDGVPVQYIAIRADITQRKILEQSVQRMALYDDLTGLPNRRLM 305 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + L +DN + ++ +G ++ + + L +++ + Sbjct: 306 VERLQMIREACVRSHRHGAVMFLDLDNFKEINDTHGHEQGDRLLKQVGQRLRENIRQVDT 365 Query: 393 LYQLPGSELLLVLSGPETE-----GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 + + G E +++L+ + + + ++ L S +N L F Sbjct: 366 VARAGGDEFIILLADLDEDPAKATAQAYNVAEKLRNALSTPYIFNRIVLHTSTSVGIVMF 425 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + L ++ A + + + + + LL +R AL + + Sbjct: 426 SDKAKPKTELFKHADMALYRAKAQGKNR-ISMFDPSLQAEVLEYASLLADLRQALQRDEF 484 Query: 505 LLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP+ + + G++ ++ + G++ P +F+P+ Q L VL K Sbjct: 485 RLYFQPVVNRDGKVIGHEALIRWIHPVRGMVLPGQFIPVAEQTGLIQEIGQWVLSMACKQ 544 Query: 563 LATHPCDK--KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L D SVN+ + G++ ++ P+ + LE+TE ++ Sbjct: 545 LNVWSEDAVKSQWTLSVNVSAKQFRDMDFVGKVHDAIRQSGADPKRLWLELTESMFHTDI 604 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 ++ + L G ++DDFGTGY++ LK L D +KID FV+D++ + DA IV Sbjct: 605 VQTIEKMRALQDIGVHFSMDDFGTGYSSLSVLKLLPLDQLKIDRSFVRDVIDDPNDAAIV 664 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 R+I LA +L+VVAE +E+ +Q L + G Q QGY G+P P+ + Sbjct: 665 RTILALAGILNLTVVAEGIESSEQFDFLEQHGCQAFQGYFFGKPVPMDE 713 >UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYQ8_METML Length = 739 Score = 627 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 98/504 (19%), Positives = 195/504 (38%), Gaps = 28/504 (5%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 +++ + ++ L+ + + + L G + + F + + Sbjct: 221 VVYAEDLQRVVDELAMLSSSNPVVMI---ENRVLSGTGDVHWMQFSNRGIFDEYGQLTEI 277 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRI 357 + R + A DPLT L N R + + L + Sbjct: 278 QSVGRDISDRKRAEEEVQKLAYKDPLTGLSNRRLMLDRLRIALATSARSMQYGALLFLDL 337 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEG 412 D + ++ G + + + + ++E + + + G E ++++ E Sbjct: 338 DKFKVINDTQGHADGDLLLVEVAKRITACVREIDTVSRQGGDEFVVLVERLGEGLEEASR 397 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + + NN + F G+ + + L+ + Q+ Sbjct: 398 TVAKIAETIRLTLAEPYQINNAHIHSSSSIGISLFCGHDQDVDELIKRADMAMYQAKDGG 457 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYDEILARLK 527 + + + L + + AL L+ Q N E G + ++ + Sbjct: 458 RNRT-RFFDPQMQELVEVRATLESDLHNALATDQFELHYQLQVNHENKPIGAEALIRWVH 516 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLL 585 G+++P F+P+ + L VL+ + +A +VN+ Sbjct: 517 PQRGMISPAHFIPVAEESALILNIGDWVLDEACRQIAVWSTNAKMCDLVLAVNISAQQFK 576 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF-GFRIAIDDFGT 644 Q + ++I ++ I P + LE+TE A + + L + G +++DDFGT Sbjct: 577 QAHFVDQVIAAIHKHGIDPSRLKLELTESVALDDITDVIAKKNLLRQKVGVTLSLDDFGT 636 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 G+++ LKRL D IKID FV+DI T+ DA++V++I D+A+ SL+V+AE VET+ Q Sbjct: 637 GFSSLSYLKRLPLDQIKIDQSFVRDITTDKSDAVMVKTIIDMAQNFSLNVIAEGVETEAQ 696 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 A L + QGYL +P P+ Sbjct: 697 LAFLKHHECKAYQGYLFSKPLPIE 720 >UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUW0_DESOH Length = 764 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 120/734 (16%), Positives = 240/734 (32%), Gaps = 65/734 (8%) Query: 56 LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG 115 L FG + +C + ++ +A + GS +L Sbjct: 20 LMAFGAYVIWSAICYVGYFLGLTKVPLYILSAGVAGSFIVNILLYLIFRTGLNKKFQDKS 79 Query: 116 LTSRYVWQRLFWLGLVTPIGI------KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 LT + FW+ +V +V F F L+I F +IF +V+ Sbjct: 80 LTLIQMVIATFWIMVVVYYAYEARSAVLLVYMVVLVFGLFRLRIRQFL--FLSIFALVNF 137 Query: 170 LSLFTAVLIYNMLFYYLTRM----IVSPHFAQILWRRD---IAPSLGKEKRAFTLSWLAA 222 ++ + Y R+ IV F + I RAFT L Sbjct: 138 SAVIFVLYKLQP-GYINVRVDIFNIVVLAFILPWFSVVGGYITNLRASISRAFTTIELLT 196 Query: 223 ------------------LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN 264 +S + +L + L F + + Sbjct: 197 NNIEDIVFVVDLDLNYTYVSPSVKILRGYEPEAVMKQALSDSFAPSSLDLAMRTLSEAVA 256 Query: 265 LTWAVSTLCLLNYNQNFL--QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLN 319 L + T + + T + + +V +L + R Sbjct: 257 LGKSGGTEYNKSRTLQLEIKKKDGTTVWTETKFSFVRDKNKQTVGILGVSRDITERRLAE 316 Query: 320 RRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + A D LT LPN Q A + + + +D + ++ G Sbjct: 317 EKIRYLATHDNLTELPNRTLFGQMLGRAIKFAQRYQRQFAVLFIDLDRFKIINDTMGHDA 376 Query: 372 RVHCIRSICRTLLPLMQENEKLYQL----------PGSELLLVLSGPETEGRLQHMVNIL 421 ++ I ++ + + +L G E ++++ ++ + + Sbjct: 377 GDQLLKEIASRFRQSLRAVDVVGRLNEKDSVVGRLGGDEFVVLIEEVTNLSQVATVAQKI 436 Query: 422 NS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + + + + + E + L+ + + Sbjct: 437 LNTAIKPMVLLGEECRVTASIGISVYPDDGEDERTLMKKADMAMYFAKEEGKN-NFQFYS 495 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 + ++ + +R AL++ +L L Q + G + +L G++ P Sbjct: 496 QNTHSPAFERFFVEAELRHALERNELYLDYQAKLDFKTGAITGSEALLRWRNPGLGLVAP 555 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 +FLP+ + L V+++ +VNL L+ + I Sbjct: 556 TQFLPVAEETGLIVPIGRWVMKTACAQNVAWQRQGLPPVTVAVNLSLRQLMDDKLIEDIR 615 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + ++P + LEITE + + ++ G RIA+DDFGTGY++ ++K Sbjct: 616 TALEASGMAPNLLELEITESIVMHKPAPLIELLARIKSLGVRIALDDFGTGYSSLAQIKH 675 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +K+D F++++ N D I+ ++ + +A SL+V+AE VET Q L + Sbjct: 676 LPVDTLKVDRSFIRNLQQNPDDREIIEAVIAMGRALSLNVIAEGVETLAQDTYLREHICD 735 Query: 715 YLQGYLIGRPQPLA 728 +QG+ +P Sbjct: 736 EMQGFYFSKPVAPD 749 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 96/447 (21%), Positives = 174/447 (38%), Gaps = 17/447 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 L+ + R + R H A D LT LPN ++ Sbjct: 382 DGARRGLVMVGRDVTERKLAAARIHHLAHHDSLTGLPNRVLFQERLRTALAQAKRLGHKV 441 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G + ++++ + LL ++E + + +L G E +VL+ + Sbjct: 442 ALMFLDLDKFKDINDTLGHHLGDLLLKAVAKRLLRCVRETDTVARLGGDEFAVVLTNLDD 501 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++ + S + ++ F + + LL +S A Sbjct: 502 PEGASNVAESIIASISEPFGLDEHEVNTSTSIGITIFPDDAVDSEVLLKNADLAMFRSKA 561 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + + + ++ + +R AL L ++ QP+ E G + ++ Sbjct: 562 EGRN-NYHFYVAEMDAEIQARKVVEHDLRVALGTDQLEMHYQPLIEMKTGEVVGCEALIR 620 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 G ++P +F+P+ + +L +L P + +VNL P+ Sbjct: 621 WKHPTRGWVSPVEFIPIAERTDLIVPLGRWILHRSCLQGRDWARAGLPPQKIAVNLSPVQ 680 Query: 584 LLQKN-IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + I + + P + LEITE A N E+++ + QL G I+IDDF Sbjct: 681 FKNHTALLAMIADILDQTGFPPDQLQLEITEGIAMQNVEATVDVLRQLRDMGVLISIDDF 740 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID FV DI + +A +V +I L + V E VET Sbjct: 741 GTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVNAIVTLGHSLGTRVNVEGVETI 800 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L GV QG+ + P + Sbjct: 801 EQLDFLKAHGVDEAQGFYFAKALPPDE 827 >UniRef50_C4KD26 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Betaproteobacteria RepID=C4KD26_THASP Length = 703 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 100/472 (21%), Positives = 169/472 (35%), Gaps = 29/472 (6%) Query: 284 GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 ++ + L ++R + R H A D LT L N R+ + Sbjct: 213 RTGRPCHQEARVSAIDDGEA--LCLLRDITERKEYETRIHHLAYFDSLTGLANRRSFLER 270 Query: 344 PEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY- 394 E+E + L +D + ++ G ++ L + + + + Sbjct: 271 LEREIRRALQNKWRLAVLFLDLDRFKSINDTLGHAAGDALLQQAAERLRAITRPGDIVAH 330 Query: 395 -----------QLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 +L G E ++L + + + L + Sbjct: 331 DTDRMGTAEFARLGGDEFTVLLPTISRPDDALAIAERIRASICAPFAIEGQELCVTTSVG 390 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F + E L+ + A+ ++ + +V L +R AL Sbjct: 391 IAVFPDDGEDAATLIKHADIAMYDAKANGRNGC-RYYNPALTAEAVHRVELEAGLRRALA 449 Query: 501 QGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 +L+L QP + + ++ DG ++ P +F+P + L VL Sbjct: 450 HDELVLMYQPQVEVRDGSIATVEALVRWQTPDGRLVPPLEFIPFAEECGLIDAIGSWVLR 509 Query: 558 SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 A R +VNL P+ + RI + + + LEITE Sbjct: 510 RACHDAAQWQRRGLDLRVAVNLSPVQFRASGLLDRIREALADSDLPAERLELEITESALM 569 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 ++ + + L G IA+DDFGTGY++ LKRL D +KID FV + + + Sbjct: 570 ADDADTHATLAALRTLGIGIALDDFGTGYSSLSCLKRLPLDKLKIDRSFVSGLPDDVDNH 629 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I LA+ + AE VET Q LL +L LQGYL R P A+ Sbjct: 630 AIVRAIVALARHLGFRIAAEGVETAAQAELLGELEADSLQGYLFSRAVPAAE 681 >UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW15_DESAC Length = 893 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 109/551 (19%), Positives = 215/551 (39%), Gaps = 27/551 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN---DFIAGYLVPVFFIIFTLGVGKLRY 260 E+R +L V + L D+I + F + + +L Sbjct: 331 EQALRESEQRYRSLYTAMREGVAIGELVYDAHGVACDYILHDVNRAFSEMLGVASEELVG 390 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSL-------AFILAVLISFSVCLLYMVRIYH 313 + + + + ++ G+ EY L F ++V ++ Sbjct: 391 HRASEFYHGAPPYIHILDEVVKYGIPKEYELPLSDLEKVFHVSVSRPEKERFACIINDVT 450 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSR 365 S+ + A D LT LPN ++ +Q ++ L +D+ + ++ Sbjct: 451 DSKKAQQEIERLAYYDTLTGLPNRVLIKDRLQQAVAQAQRSRALVGVLALDLDHFKKIND 510 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LN 422 G+ ++ + + L +++ + + ++ G E +++++G +++ + L Sbjct: 511 SLGIGCGDQMLKLVSQRLKGHLRQGDSVARMGGDEFVILITGIKSQNDIVTAAGKILDLL 570 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + L + + + + LL Q+ L ++ Sbjct: 571 AEPVTIDGHDLVSTGSLGISVYPTDADEVDLLLKHADTAMYQAKETGRNL-YQFYSPDMN 629 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + +++ L + + AL + +L LY QP + G + +L G ++P F+ Sbjct: 630 ERAFERLFLDSDLHRALARNELELYFQPQIDLAQGHVVGAEALLRWNHATKGQISPVVFI 689 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + +L V+E + R +VNL ++ + R+ Sbjct: 690 PLAEESDLILDIGGWVIEEACRHARQWHDQGYTDLRVAVNLSARQFR-SDLPDIVARVLH 748 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + LE+TE E + + +L G ++IDDFGTGY++ LK D Sbjct: 749 ETGLPAHLLELELTESLLMERPELARTILNKLRYLGNHLSIDDFGTGYSSLSYLKHFPID 808 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FVKD+ + DA+IV +I LA L+VVAE VET Q + + G +QG Sbjct: 809 RLKIDRSFVKDLNVDPDDAIIVEAIIALAHGLRLNVVAEGVETSDQFEFMRQRGCDEIQG 868 Query: 719 YLIGRPQPLAD 729 Y++ RP P D Sbjct: 869 YVVARPMPADD 879 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 90/444 (20%), Positives = 172/444 (38%), Gaps = 20/444 (4%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------ 351 LI+F+ + + + + H A D LT LPN L+ Q + Sbjct: 441 LINFTTRIAGIAI---ERKKAEDQIHFMANHDVLTGLPNRALLQDRLSQAILHAQRYDRW 497 Query: 352 --FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-P 408 + +DN + ++ G ++++ ++ + + + +L G E +LVLS P Sbjct: 498 VSVVFIDLDNFKLINDTLGHNAGDRLLKTVAERMVGCISSTDTIVRLGGDEFVLVLSDQP 557 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + L + + + + + + + + L+ ++ Sbjct: 558 KNVDLIAETLQKLRTAIAEPLQLGDHCVRATASIGIATYPKDGKAPESLVANADAAMYRA 617 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEI 522 A + + ++ LL +RTAL + L+ QP + + + Sbjct: 618 KAVGRD-NFQFYAPEFNTRAHERFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVEAL 676 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMP 581 + G M P F+P + L VL + + SVN+ Sbjct: 677 IRWNHPAHGAMAPVGFIPTAEETGLIVPIGDWVLHEACRQNKAWQDLGLEPITVSVNVSA 736 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 +KN+ R++ + + LE+TE + ++ + +L G +I+IDD Sbjct: 737 RQFSEKNLVERVVHALSESDLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISIDD 796 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK +KID F+ D+ TN D + ++ L + + V+AE VET Sbjct: 797 FGTGYSSLSALKTFPIARLKIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGVET 856 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQ 725 +Q A L K +QGY +P Sbjct: 857 DEQVAFLRKNNCDEMQGYHFSKPV 880 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 99/466 (21%), Positives = 189/466 (40%), Gaps = 21/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 +G +L + + ++ + + R+ QA D LT LPN + Sbjct: 784 RGDIVPVNLLGHPVRIGGEITNIFWIYQDISERKEFERQITHQAFHDSLTGLPNRSLFRE 843 Query: 343 AP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + + + ++ ++++ G + I L ++ + + Sbjct: 844 RLGRAVERTKRRPDYHFAAMLIDLNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTV 903 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E ++L T + + + + R WN + G + Sbjct: 904 ARLGGDEFAILLEEFRTNKEVISVASRIQNEVRRAFLWNGKEIVSGASVGIVLQTRDCAG 963 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + +L ++ + + + + + + N +R A++ L L+ QP Sbjct: 964 AEDILRDADIAMYKAKERGRGHLV--FHNRMRQEVLEVINMENELRRAIEGNSLELHYQP 1021 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 I + + EG++ ++ + G++ PD+F+PL + L V+ + + L + Sbjct: 1022 IFDVDGGKLEGFEALVRWRHPEHGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWD 1081 Query: 568 CDK----KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + G SVNL Q + I+R + I+P + LEITE + ++ Sbjct: 1082 DESGTAEYGLTMSVNLSCKQFAQHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAA 1141 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + +L + G +A+DDFGTGY++ L++ DI+KID F+ T +A IVRSI Sbjct: 1142 AEKLRRLKEIGVLLAVDDFGTGYSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSI 1201 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D+A + L V AE VETQ+Q L + QGY+ +P D Sbjct: 1202 VDMAHSLGLRVTAEGVETQEQLERLQSINCDRAQGYMFSKPMAPGD 1247 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 94/446 (21%), Positives = 179/446 (40%), Gaps = 22/446 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---------FCCL 355 + + + AL DPLT LPN Q + + Sbjct: 418 MAGSLSDISEQRLAQEQLMHDALHDPLTGLPNRTLFMDRLRQVIHHARRHRNYNFAVLFV 477 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---ETEG 412 +D + ++ G + + + ++ ++ + +L G E +++L E Sbjct: 478 DLDRFKVINDSLGHLAGDTLLIELAHRFQIGLRPDDTVARLGGDEFVILLDDLLEVEESI 537 Query: 413 RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 R+ H + L + N + D + + L ++ A Sbjct: 538 RIAHRIQTLVQQPFIINGQTVFTSASIGIAPKDTHHHKPEHYLRNADIAMYRAKAAGGSR 597 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + ++ ++ L +R AL++ +L L QPI + G++ ++ Sbjct: 598 HV-LFTSVMHTSALVRLQLETDLRQALERQELRLQYQPILCLNTDQIVGFEALVRWQHPR 656 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQ 586 G++ P F+ + + L VL+ + + SVNL L Q Sbjct: 657 DGLIAPGHFITVAEETGLIVPIGEWVLQEACRQMQCWHTQFGQVLPLMVSVNLSSKQLSQ 716 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ ++ R+ + PQ + LEITE N E + + +L + ++++DDFGTGY Sbjct: 717 PDLLQQVDRMLAETGLRPQQLKLEITESMILDNTEVARQTLLKLKERQIQLSMDDFGTGY 776 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L RL D++KID F+ ++ + +VR+I +A + + V+AE +ET+ Q Sbjct: 777 SSLNYLHRLPIDLLKIDRSFIHEMDSGEESRELVRAIISIAHSLKMQVIAEGIETRSQLE 836 Query: 707 LLHKLGVQYLQGYLIGRPQ---PLAD 729 LH+LG ++ QGYL P P AD Sbjct: 837 QLHELGCEFGQGYLFSTPLDPEPAAD 862 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 101/475 (21%), Positives = 179/475 (37%), Gaps = 24/475 (5%) Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 V L + + L L + V R A Sbjct: 476 VERLREGEHTLHRHLSDGRIIKLNHKRMELGGWVVTY----EDVTERHKAQARVAHMARH 531 Query: 329 DPLTLLPNFRALEQA----PEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN + Q + C +DN + ++ G +R + Sbjct: 532 DSLTDLPNRTLFREKMGEGLNQVAIAGGAMAVLCFDLDNFKTVNDRLGHAAGDRLLRWVA 591 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 L + E++ + +L G E ++ GP+ + + + L + + +G Sbjct: 592 ARLKENVGEHDTVARLGGDEFAVLQRGPQPQS-AEKLARRLVEIIGHPPPLESQSIHVGV 650 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + L+ Q+ A A E + + + L + +R Sbjct: 651 SVGIAIAPDHGLDADELMKCADLALYQAKARGRG-AYQLFEPEMEEEARSRHALEHNLRG 709 Query: 498 ALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL+ + L QP + E G++ +L G ++P +F+P+ + L Sbjct: 710 ALEAREFHLVFQPQVRLESSELTGFEALLRWKHPSRGFVSPAEFIPIAEENGLIVPIGEW 769 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 VL + A+ +VNL P+ + +A + + PQ + LE+TE Sbjct: 770 VLRTACATAASW----PDVTVAVNLSPVQFRARGLAAMVTSALAEAGLPPQRLELEVTET 825 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 ++E+++ + QL G R+++DDFG GY++ L++ D IKID FV + + Sbjct: 826 ALLDDSEATIEILHQLRALGVRVSLDDFGVGYSSLSYLRKFPFDRIKIDRSFVGTLGESP 885 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I L + AE VET++Q + + G +QGY GRP P A+ Sbjct: 886 ESVAIVRTIASLGSVLGVETTAEGVETEEQLDFVRECGCTAVQGYYFGRPCPAAE 940 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 102/447 (22%), Positives = 184/447 (41%), Gaps = 17/447 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 V + + R + R A D LT LPN + ++ Sbjct: 357 RGHLVNCIGIFSDISRLKATEERLEQLAFFDCLTKLPNRAHFQSRLDHALTAANRRQNKV 416 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + +D+ + ++ G + + + ++E + + ++ G E ++L+ Sbjct: 417 GLIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDTVARMGGDEFTIILADLTD 476 Query: 411 EGRL--QHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 ++ + IL S I + L +G + + L+ ++ Sbjct: 477 TAKVMTNVALTILESFTHPIVLEDKKLFIGCSLGMAIYPDDSGNAALLIKHADTAMYRAK 536 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEIL 523 ++ Q ++ L + +R A+D LY QP + E G++ +L Sbjct: 537 ESGRNR-YSFYTAEMNAQAQSRISLESELRYAIDHKAFELYYQPKVDAHSSEIVGFEALL 595 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPL 582 + G+++P++F+P+ + L A QV+E + L + C K ++NL Sbjct: 596 RWIHPTEGVISPNQFIPIAEESGLIAAIGNQVVEMACQGLQRINRCTPKPLPVAINLSVR 655 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L Q N+ + Y I + + LE+TE E S ++ LH+ G++IAIDDF Sbjct: 656 QLRQDNLVNYFSQTLANYGIEAEQLELEVTESFLAKPIEKSAALLQALHQLGYKIAIDDF 715 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK +KID FV ++ N IV++I +A A +VAE VET Sbjct: 716 GTGYSSLSYLKNFPIHTLKIDRSFVMEVAHNQESRTIVQAIISMAHALGYDLVAEGVETA 775 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q +L LG +QG+ RP PL + Sbjct: 776 AQVNVLQGLGCGIMQGFHYARPAPLHE 802 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 96/466 (20%), Positives = 182/466 (39%), Gaps = 21/466 (4%) Query: 283 QGVETEYSLAFILAVLISFS--VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + Y ++ S + L+ + ++ R A D LT LPN Sbjct: 441 RKNGEMYPAWSSISRAAYGSDEMILVCVFSDISAAKQYEARLQHLAHYDALTELPNRLLF 500 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + +D + ++ G +R + L ++ ++ Sbjct: 501 RERLADMLVRAERHGNMLALLFIDLDGFKPINDTLGHAAGDELLRRVAERLGGCVRASDT 560 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL--DMGYGAAWGRFDGN 447 +L G E ++L + + + R + G + + Sbjct: 561 TARLGGDEFAVLLDELRSPEEAGIIARNILDTLERPYILAGQPQCQYISASIGIGCYPSD 620 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL Q ++ ++ Q ++++ + N++R ALD+ +L L Sbjct: 621 SLDAETLLRQADMAMYRAKQEGKNR-YRFFAPEINAQASERLFMANSLRAALDRDELRLV 679 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + E G + ++ G + P +F+ L + L VL + + Sbjct: 680 FQPCMDFATLEVAGVEALVRWEHPQKGTILPSRFISLAEESGLIEPIGEWVLREAARRVR 739 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 R +VNL P + ++A R++ + ++P+ + LE+TE + E + Sbjct: 740 EWKNAGIFAGRVAVNLSPRQFRRSDLASRLLVVLDEAGLAPRDLELEVTEGMIMEHPERA 799 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +L G I+IDDFGTGY++ LKR +KID FV + + D + R++ Sbjct: 800 VVVLTELVAAGVSISIDDFGTGYSSLAYLKRFPVHSLKIDRSFVSGLPGDRNDRSLTRAV 859 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ-PLA 728 +AK+ LSVVAE VE Q L ++G + QG+ RP P A Sbjct: 860 VAVAKSLGLSVVAEGVEHAGQVDFLRRIGCDFAQGHYFSRPLDPAA 905 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 97/463 (20%), Positives = 191/463 (41%), Gaps = 19/463 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + V+ + + + R A DPL+ LPN Sbjct: 283 RKSGEIYPQWQCIRVIHDEHGRISHYVAVFSDITALKRSQRELDYLAHHDPLSNLPNRLL 342 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + + +D+ + ++ G + ++S+ L + Sbjct: 343 FTERIAHALERSKSEQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGC 402 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 L +L G E L+ + + L + L +G F + Sbjct: 403 TLARLGGDEFGLLSETCADAPQAAELAQNLLRCLEAPFRLDEHELYIGASIGISLFPDDA 462 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++++ +L ++ + + ++ ++V L +++R ALD +L ++ Sbjct: 463 DSVEQVLRNADSALFKAKSSGR-EGYAFYVQELTDYARQRVELASSLRHALDNHELRVFY 521 Query: 509 QPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP+ + E G + ++ G++ P +F+P+ + D VLE + Sbjct: 522 QPLHDLENGNPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMR 581 Query: 566 HPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + R +VN+ + + ++ ++ +SPQ + LE+TE + ++++ Sbjct: 582 WNAEGSALRFVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAAL 641 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G R+AIDDFGTGY++ RLKRL D +K+D FV+ + + DA I R++ Sbjct: 642 SLLTRLRALGVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVI 701 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 L + L+V+AE +E+ Q L LG Y QGY GRP P+ Sbjct: 702 ALGHSLGLNVLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPV 744 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 106/603 (17%), Positives = 205/603 (33%), Gaps = 35/603 (5%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM-IVSPHFAQILWRRDIAPSLGKEKRA 214 D D ++ + L + I + + E+R Sbjct: 398 QSADMDDYRWLMGFGRVIRDETSGRPLRVVGLNLDITDRRTTEDALAQSQTHLRASEERL 457 Query: 215 FTLSWLAALSVL--LLLLCTPYEND-------FIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 + + + +D + G + P L + L Sbjct: 458 ALALDSGNDGLFDWNVTTGKVWYSDRWQTMLGYKPGEIEPHILSWERLVHPDDLHQARTL 517 Query: 266 TWA--VSTLCLLNYNQNFLQGVETEYSLA----FILAVLISFSVCLLYMVRIYHRSEWLN 319 + + + + ++ + Sbjct: 518 LTEHFGELSATYSSEHRLRSKSGEYTWVLGRGRVVARDEQGAPLRMVGTSIDITERKASE 577 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMM 371 +R A D LT LPN + EQ + CL +D + ++ G Sbjct: 578 QRIAYMARHDVLTGLPNRTVFHEHLEQRLAEVRRGRGQAALLCLDLDRFKSINDMLGHPA 637 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW 428 + I L ++ + + +L G E +++S + + + + + + Sbjct: 638 GDELLCQIATRLRATVRGGDVVVRLGGDEFAIIVSHLDHARQASVLAQRVIDAVGQPLDL 697 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + +G N +T + L ++ A E + + Sbjct: 698 GGHLVTVGISIGIAFAPTNGDTSETLFKNADLALYRAKASARN-TYCFYEAGMDAAVEAR 756 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L +R A+ G L+ QP+ + G++ ++ G++ PD+F+P + Sbjct: 757 MQLEFEMREAITCGSFALHYQPVLRLADHRIVGFEALMRWPHPKRGMIAPDEFIPSAEET 816 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L L+ + A+ P R +VN+ + Q + ++ ++P Sbjct: 817 GLIVPLGSWALQEACREAASWPD---HLRIAVNVSAVQFQQPGLEQGVMSALAASGLAPH 873 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 ++LE+TE +AE+ + + +L G RIA+DDFGTGY++ L+R D IKID Sbjct: 874 RLVLEVTESVLVQDAEAVIACLHRLKSLGVRIALDDFGTGYSSLSYLRRFPFDRIKIDRS 933 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F+ +I + A IVR++ +A +V AE VET Q + G +QGYL+ RP Sbjct: 934 FISEIG-DPGAAAIVRAVVGIAMQLGATVTAEGVETTAQLEQVRSEGCMEVQGYLVSRPL 992 Query: 726 PLA 728 P Sbjct: 993 PAD 995 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 136/742 (18%), Positives = 249/742 (33%), Gaps = 45/742 (6%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMF 72 I+ F + F A+ + F + + V L+ L I G R + G Sbjct: 61 IWATHFIAMLAFAPGMAF--GFALAPTVASFAVAV-MLVSLAALAIVGSRTRHGAVAGGA 117 Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF-WLGLV 131 L + + A T R + L+ + L Sbjct: 118 LIGLAIAGMHYTGMAAYRVQGTIA----WDGQRVAVSVLAGIALSVLALRLSLAPQRLAR 173 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + + + G+ F +S + A+ A ++ + ++ Sbjct: 174 ALAPLALLLAVCGAHFIGMGALSLRYDPRIALP-----DGSLDAAVVTILTANAAFLILG 228 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 + A L + + + +R L+ +A +L+ C + + + Sbjct: 229 AALAALRLSILNHRRRVAERQRLRDLADIAVEGLLI---CDDDAIVGVNRSIERILGRGR 285 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL-AVLISFSVCLLYMVR 310 +G+ L A + + E + I + I L+ VR Sbjct: 286 EEVIGRALPDLLPGLSAAAIPLTHERDATLRDASGAEIPVRVIAQTIAIETRPHLVVAVR 345 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALE-----------QAPEQE-AGKSFCCLRID 358 A D LT L N A + A + L +D Sbjct: 346 DQRDRLRAEAAITHLAHHDALTGLANRLRFNGVLAELLAERFAARRHDPAPFALLILDLD 405 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G M +R + + LL ++ + + +L G E ++L+G + Sbjct: 406 RFKAVNDTLGHGMGDDLLRRVAQRLLRVVGAADVVARLGGDEFAILLAGAGDAAGAGDLA 465 Query: 419 NI---------LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 I + SR + LD+G + +T + LL + Sbjct: 466 AIQAAAERAIEILSRPFVIDGHILDIGASIGIALAPQDGDTPEQLLRSADLALYGAKEEG 525 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARL 526 E ++ + + L +R AL + + LY QP + G + ++ Sbjct: 526 RGR-FRMFEGTMNARMQARRSLELDLRRALARQEFELYFQPQVDARTGRFDGAEALIRWH 584 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + G+++P +F+PL + L VL + +VNL P+ Sbjct: 585 HPERGLVSPGEFIPLAEETGLIGPLGEWVLRTACAEARRWA---TPLPVAVNLSPVQFRD 641 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +A + + + + +EITE + ++ + +L G RI++DDFGTGY Sbjct: 642 PRLAATVRGILAETGLPGSRLEIEITEGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGY 701 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+R D IKID FV+ + IVR+I L ++ + AE VET QQ Sbjct: 702 SSLSYLRRFPFDKIKIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSV 761 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 + G LQGYL RP P Sbjct: 762 FIAGEGCDQLQGYLYSRPVPAE 783 >UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2P9_BACS4 Length = 696 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 103/500 (20%), Positives = 205/500 (41%), Gaps = 16/500 (3%) Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 P F I+ +R F NL L+ +G + + Sbjct: 187 PFFTIVHPDEHDYVRSRFENLLENPDKPQKLDVRLRHKEGNWRTVHVIANNRMDDPHIEG 246 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLR 356 ++ ++ H A D LT LPN R E+ E + + + Sbjct: 247 VIINYHDVTEMREAQQKIHHMAYHDYLTDLPNRRYFEEQLEAELQDAKTNRSKLAVLFID 306 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 ID +F++ G + ++ I L+ L+ E + + ++ G E ++++ E ++ Sbjct: 307 IDRFKFINDTLGHHVGDKALKEIAEMLVSLVSEKDLIARMAGDEFMILVPHIEALDYVKE 366 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + R I +++ L + + + E + +L ++ + Sbjct: 367 LADSILKRMESPIVFDHYELFVTGSIGISTYPESGEDISVILKNADLAMYKAKET-KENS 425 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 + + + K L N +R A+ + LY QP + + G + ++ Sbjct: 426 FEFFTPEMEENSYKNFALQNDLRRAITNNEFELYYQPKVSASTEKVVGVEALIRWNHPTL 485 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G+++P F+P+ L V +++ K + S+N + +LQK + Sbjct: 486 GMVSPGHFIPIAEDTGLIVPIGEWVFDAVCKQVKRWENTGFPPLVVSLNFSAIQMLQKGL 545 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ L ++ + + +E+TE + + +E L + G IAIDDFGTGY++ Sbjct: 546 VTKVKNLLEKNQVEGHWIEVEMTESLILEHDNDILNKLEGLKQLGIHIAIDDFGTGYSSL 605 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+ + + IK+D F+ DI T+ + I+ I L+ ++ VVAE VE ++Q +L Sbjct: 606 SYLKKYKFNTIKLDKSFINDIHTSADNQAIITFIIQLSNQLNMKVVAEGVEIKEQHDILQ 665 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 KL LQG+ RP+P+ + Sbjct: 666 KLNCDELQGFYFSRPKPVKE 685 >UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0L7_9PROT Length = 951 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 106/501 (21%), Positives = 195/501 (38%), Gaps = 24/501 (4%) Query: 252 TLGVGKLRYPFLNLTWAV-STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--CLLYM 308 LG G+ F W V + + + + Y + + + + + Sbjct: 429 LLGSGRHNQDFYKSMWEVLNRVGSWSGELWDRRKNGEIYPKWLTITAVKNRDEISHYVGV 488 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNL 360 + H A DPLT LPN R L + + + + +D+ Sbjct: 489 FVDITERKKAEEEIHNLAFFDPLTQLPNRRLLLDRMRLALGLSARSKNFGALMFIDLDHF 548 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH---- 416 + ++ G + + L +++ + + + G E +++L + Sbjct: 549 KVLNDTKGHEYGDKMLIEVSHRLTQSLRDTDSVARFGGDEFVVLLESLSVNQDIAVAQAG 608 Query: 417 -MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S+ + + F+G+ + LL + Q+ Sbjct: 609 SIAEKMRESLSQTYIIESYAHESTPSIGVVLFNGDAIEIDELLKRADLAMYQAKESGRN- 667 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDG 530 + E + + L+ +R AL + LY Q N E G + +L Sbjct: 668 TVRFFESAMQATLESRTLMERALRQALSNSEFELYYQVQTNQANELLGAEVLLRWHSQSL 727 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKN 588 G ++P +F+PL Q L VLE+ L R +VN+ P+ Q + Sbjct: 728 GPISPAQFIPLAEQTKLILPIGEWVLENACARLKAWETHPTLSKLRLAVNISPVQFHQPD 787 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++ ++P+ + LE+TE + + ++ + L G R ++DDFGTGY++ Sbjct: 788 FVRQVQAALTDSGVNPRRLELELTENLVLEDVDEAIQKMSALKALGVRFSMDDFGTGYSS 847 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 + +KRL D +KID FV+DI+T+ DAM+V++I +A+ V+AE VE Q L Sbjct: 848 LQYIKRLPIDQLKIDQSFVRDILTDPGDAMMVQTIAGMARNFGYEVIAEGVEEHAQLLPL 907 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + G QGY RP LA+ Sbjct: 908 IERGCNTFQGYFFSRPVALAE 928 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 89/469 (18%), Positives = 192/469 (40%), Gaps = 27/469 (5%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + R A D LT LPN Sbjct: 461 RKNGEVYPEWLAISAVRNAVGEITHYVAIFSDLSERKAADERIQFLAHFDVLTGLPNRAH 520 Query: 340 LEQAPEQEAGKSFCCLRID------------NLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 ++ E + D + ++ G ++ + + + Sbjct: 521 IQDRVELAIQNATR----DNERLALLLLDLDRFKTINESLGHSAGDALLQVLAERIRSTL 576 Query: 388 QENEKLYQLPGSELLLVLS---GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRF 444 E + + G E +++L P + + + + N + + F Sbjct: 577 LTGEVVARQGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFNHSISITPSIGISVF 636 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + L+ + + + ++ + + + + + +R ALD+ + Sbjct: 637 PDDGRDFETLVRNADAAMYHAKSAGRN-SYKFYTADLNARAREILEIESQLRYALDRDEF 695 Query: 505 LLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +L+ QP + E G + ++ + G++ P +F+ + + + V++ + Sbjct: 696 VLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQEACR 755 Query: 562 WLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 LA +VNL L Q+++A + R + + + +E+TE + Sbjct: 756 QLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDV 815 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E++++ I+++ G +++IDDFGTGY++ LKR +AD +KID FV+DI + D+ I Sbjct: 816 ETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIA 875 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 R+I ++AK +++V+AE VET +Q L + G QGYL+ +P P + Sbjct: 876 RAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKE 924 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 140/673 (20%), Positives = 253/673 (37%), Gaps = 46/673 (6%) Query: 95 FVVLCACAILRWQLGTRWRYGLT-SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKI 153 F ++ A L R L R L GI ++ F P+ + Sbjct: 13 FSLIVAILASYTALDMAGRVTLAKGREALSWLIGGAFAMGFGIWSMHFVGMLAFSLPIPL 72 Query: 154 S-----------TFFGDADAIFTVV----------DLLSLFTAVLIYNMLFYYLTRMIVS 192 G + +V L +L I M + + +++ Sbjct: 73 GYDLGLTLLSLLLAVGSSAFALWLVCQAELPWQRLALGALLMGSGIAAMHYTGMAALLMM 132 Query: 193 PH--FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 P + + I ++ A +++ ++L + +V + + Sbjct: 133 PGIVYDPLWLGLSILIAVIASGAALWIAFRLRHGSRRIVLVRAGAALVMGCAIVGMHYTG 192 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 L A + + ++A I++VL S ++ Sbjct: 193 MAAAQFPLG---SFCGAAGRGIDNGWLAVLVIVITLAVIAIALIVSVLDSRLEARTSVLA 249 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEF 362 NR AL D LT LPN L+ EQ + + +D + Sbjct: 250 --TSLARANRELIQLALHDNLTKLPNRMLLDDRLEQAIQQAIRDDRRFAVLFMDLDGFKA 307 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ YG + + + + ++ + + +L G E +L++ + L Sbjct: 308 VNDAYGHHLGDLLLIEVAERIRANVRAQDTIARLGGDEFVLLIE-AREPADAATLAEKLV 366 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S+ + + + + G+ +T L+ + E Sbjct: 367 KRISQPYQISRHEVRISASIGIALYPGDGQTRHELMINADAAMYHAKDQGRN-GYCFFES 425 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 ++ +Q+ LL+ +R AL++ L+L+ QP N G + +L G++TP Sbjct: 426 SMNANAQEQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMIGVEALLRWEHPQHGLITPG 485 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIR 595 +FLPL + L + VL+ + + +VNL L + + Sbjct: 486 QFLPLAEKTGLIVQIGEWVLDEACRQMRLWLDGGHADWNIAVNLSALQFAHAGLVDSVRN 545 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 R+ + P +ILE+TE A +A++S+ +EQL G I+IDDFGTGY++ LKRL Sbjct: 546 ALLRHSLEPSHLILEVTESTAMRDADASLVILEQLSAMGVGISIDDFGTGYSSLLYLKRL 605 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 A +KID F+ ++ ++ DA IV +I L + +L +VAE VET+ QQ L +LG Sbjct: 606 PASELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVETEAQQEFLTRLGCNS 665 Query: 716 LQGYLIGRPQPLA 728 LQG+L+GRP P Sbjct: 666 LQGFLLGRPMPAE 678 >UniRef50_Q3IEE0 Putative orphan protein; putative conserved domain n=3 Tax=Alteromonadales RepID=Q3IEE0_PSEHT Length = 1002 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 111/655 (16%), Positives = 222/655 (33%), Gaps = 36/655 (5%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 + ++ + L + F L ++ I + ++ S + Sbjct: 334 WYVGVYKKRSSTFSALADLKMK--FFGLFILYAILVALLLHQALYQLVLRRIHSLVYAVT 391 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + + + L M + + I EK A LS Sbjct: 392 NFGQGQLQIEFPKENKDEIGTLNGSFKDMTIEIRKLIDGLNQRIIEKEIAEKAARRLSKA 451 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL-RYPFLNLTWAVSTLCLLNYNQ 279 A S + +F+ Y+ P + + R P L++ + + + + + Sbjct: 452 VAFS---GTGVVITDKNFVIEYVNPKMLEMTSFSEEHFNRAPLLSIIASEMAILIDDIDV 508 Query: 280 NFLQGV------------ETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHL 324 + + ++ ++ + + + + R+ Sbjct: 509 DLRSRNCWRGDTLIESNNKAPIWVSLSISPIREDDGTITSYVASAQDISFVKESQRKMEQ 568 Query: 325 QALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT L N + + +D + ++ G + Sbjct: 569 LAYFDTLTGLANRTFFRMQLRKSMALAERGHYAFALFYFDLDEFKRINDTLGHNAGDQLL 628 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGL 433 + L ++ + + +L G E ++LSG E + + N + I + + Sbjct: 629 VEVANRLKQRLRAEDTIARLGGDEFAILLSGIEHQEHATQVANTIQKTLNEPIQLGSNEV 688 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + + LL ++ A + ++ +++ + N Sbjct: 689 IISASIGITMAPYDSQEEDQLLKHADLAMYEAKAKGRN-TFHFYSQELNTAANERLFIEN 747 Query: 494 TIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R A+ L +Y QP + GY+ +L G + P KF+P+ L Sbjct: 748 ELRQAIKDKQLTVYYQPQIDSRTQLVVGYEALLRWFHPTEGAIAPTKFIPIAEATGLIVE 807 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + + ++NL ++ + ++ +S +++ LE Sbjct: 808 LGEWVLHQACNFAVKLERQGRANNIAINLSARQFKDASLLPTLKKIIASTQVSAKSLHLE 867 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE N E+++ + +L G I+IDDFGTGY++ LKR DI+KID F+KDI Sbjct: 868 LTESMLMGNVEAAIAQLHELKGLGVSISIDDFGTGYSSLSYLKRFPVDILKIDRSFIKDI 927 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + D I +I +A+ L VVAE VET +Q L +QGY P Sbjct: 928 PDDNNDMAITAAIIAMAQKLKLDVVAEGVETVEQVEFLKNNNCFIVQGYYFSPPI 982 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 90/471 (19%), Positives = 166/471 (35%), Gaps = 20/471 (4%) Query: 278 NQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + + + + ++V+ + + + A D LT L Sbjct: 1012 ERELINASQQPCPVWLNVSVMQSANGKVTHYVVVFSDITERKQTEADLRRLANYDVLTGL 1071 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN + + L +D + ++ YG M + L Sbjct: 1072 PNRSLFSSRLLQSIQAAQQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLVEASSRLQSC 1131 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGR 443 + L + G E +++L + + H+ L + + Sbjct: 1132 IASEHMLCRFGGDEFVILLRNANSIDDINHIAERLLEQIVAPFKLYGREFYISTSIGISI 1191 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + + + + + Q + L +R A+++ + Sbjct: 1192 WPDDAVQPEAFIKNADLAMYHAKEEGRG-NFQYYSSERNAQALYHLRLEADLRKAIERQE 1250 Query: 504 LLLYAQPIRN----KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 LY QP + + G + ++ G + PD F+ + L D VL Sbjct: 1251 FELYYQPQIDILRNDKLIGMEALIRWKHPLDGFIRPDIFIKVAEACGLIVDIDRWVLRQA 1310 Query: 560 LKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 A + SVN+ + Q + I + + ++ LEITE Sbjct: 1311 CVQGAHWAKRYGSTFKLSVNISAVHFRQPDFIEDIQSILHETQMPTASLGLEITEGVLMK 1370 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + ++ +L G +AIDDFGTGY++ L+ + + +KID F+ DI TN D Sbjct: 1371 ELHVAKDHLSRLKSLGIEVAIDDFGTGYSSLAYLRHFEVNTLKIDRSFLIDIATNKADQA 1430 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV SI +LA+ L+VVAE +ET +Q + G +QGY +P +AD Sbjct: 1431 IVSSIIELARNLKLNVVAEGIETVEQLEQVFSRGCYIIQGYYFAKPMCVAD 1481 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 100/494 (20%), Positives = 191/494 (38%), Gaps = 21/494 (4%) Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE-YSLAFILAVLISFSV---CLLYMVRI 311 G+ F W + + + + +E Y + V+ + + ++ Sbjct: 157 GRHDSAFYAAMWDSINVSGHWQGEVWNRRKNSEIYPQLISIDVIRDHTGRVCNYVAVLTD 216 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFM 363 + A DPLT LPN L + + L +D + + Sbjct: 217 LSKLRSSQLELDFLAHHDPLTRLPNRLLLLSRLQHGIELAQRDGTHLALLMLDLDRFKDI 276 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN---I 420 + +G ++ ++ + L+ ++ + + + G E +++ + + N Sbjct: 277 NDSFGHLVGDELLQLVATRLVKQVRTIDTVGRFGGDEFSVLMEDVAGAEQAARVANDIIR 336 Query: 421 LNSRQIHWN-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + S + + +G + N T + +L Q Q+ E Sbjct: 337 VLSEPYGLSSGVEVRIGASVGISIYPDNGLTPELMLQQADSALYQAKIEGRGR-FAYFSE 395 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 ++ ++ + +R A+ QG+L +Y QP + G + ++ G++ P Sbjct: 396 SLTQAARARIDIEVRLRRAITQGELRVYYQPQVDIPSGRIVGAEALVRWQCPIEGLVPPA 455 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIR 595 +F+ + L D VL + +VNL LQ +I+ + + Sbjct: 456 RFITIAEATGLIGEIDDWVLRETCQQGQRWRAAGLPTLTLAVNLSAYQFLQGDISQTVAQ 515 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + LE+TE ++ +++L G R+AIDDFGTGY++ LK Sbjct: 516 VLRDTGYPAAFLELELTESALMQREAQAIQMLDRLKALGVRLAIDDFGTGYSSLAYLKLF 575 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D++KID F+ DI + D IV +I +A + L V+AE VE ++Q A L G Sbjct: 576 PLDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEGVENKEQLAYLQTQGCDQ 635 Query: 716 LQGYLIGRPQPLAD 729 QGYL RP P A+ Sbjct: 636 FQGYLTSRPVPAAE 649 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 92/456 (20%), Positives = 184/456 (40%), Gaps = 16/456 (3%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------ 342 + I + V + + R ++ A D LT LPN R E+ Sbjct: 445 LHITLIPTFINKEVVGMFGIARDITTLYEKQKQVEHLAFHDALTGLPNRRKFEKDLKNIL 504 Query: 343 --APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 A + L +D + ++ G + + + + L ++ + + + G E Sbjct: 505 NTAQASANDVAVMFLDLDRFKKINDRLGHGIGDLLLIEVAKRLRGCLRSKDVVARQGGDE 564 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++L +E + + + + + L + + + L+ Sbjct: 565 FTILLPDMYSEKSAAFIAEQILNILNKPFFIKDEELSITPSIGIAMYPDCGTDVTELMKN 624 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 ++ A+ + + +S + L + AL Q + L QP + K Sbjct: 625 ADMAMYRAKANGKNRFV-FFSKEMSIAQNESNFLEGELSKALQQNEFFLEYQPQVSTKTK 683 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GP 573 + G++ ++ GI++P +F+PL + +L + Sbjct: 684 QIIGFEALIRWKHPKLGIVSPAQFIPLAEETGFIIELGNWILRTACLEAKRWHNQGFSHL 743 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 + VNL + ++ I ++ + + P+A+ +EITE A + +S + +EQL Sbjct: 744 KVGVNLSVVQFNHADLIPTISKVLEETELKPEALDIEITESIAINQNQSVVAKLEQLQNL 803 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +I+IDDFGTGY++ L + + +KI F+ I T+ L+ I+ SI L+K +L Sbjct: 804 GIQISIDDFGTGYSSLAYLTKYPINTLKIAREFICGITTSPLEEAIISSIITLSKELNLE 863 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET++Q L++ ++QG+ I +P D Sbjct: 864 VIAEGVETEEQWKFLYEQNCDHIQGFFISKPVSSKD 899 >UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5H0_9RHIZ Length = 684 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 127/659 (19%), Positives = 240/659 (36%), Gaps = 42/659 (6%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 CAI + WR + +R R W L G+ + + F L T Sbjct: 23 CAIGSFATTRLWRNAVAARQ-RDRFHWCFL---TGVTGGSSIWATHFIAMLGYQTPVPAT 78 Query: 161 DAI-FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF---T 216 TV+ ++ + L R+I L A Sbjct: 79 FDPKLTVISIVIAILGTSLGIALTTSSNRLIARLVGGATLGLSIAAMHFVGMFAYRVDGI 138 Query: 217 LSW---LAALSVLLLLLCTPYENDFIAGYLVPVFF------IIFTLGVGKLRYPFLNLTW 267 +SW LS++ + + ++ G P F +I + L + + Sbjct: 139 VSWDQTYIVLSIVASIGFSVLATFYMTGGRAPAFLSRTNAAVISLILAIVLLHFTAMDAF 198 Query: 268 AVSTLCLLNY--NQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 +V+ + L+ + + +L +L V FS ++ R R + Sbjct: 199 SVAPIAGLSSGADSGAFSAMAMSVALVALLIVFTGFSSEVIE-FRNKTR---SEIDLNYI 254 Query: 326 ALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT +PN R + A S + +D + ++ G ++ Sbjct: 255 ATHDELTGVPNRRKFSEILADRCAKTRDTGAEFSLIMIDLDRFKPVNDTLGHTTGDAVLK 314 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLV-LSGPETEGRLQHMVNIL---NSRQIHWNNTGL 433 + L +++ ++ L +L G E ++ L + + + + SR N + Sbjct: 315 RVANRLEHVIRASDFLARLGGDEFAIIALGSTGDRSNVLRLCDRIIDVLSRPFIINGHVI 374 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 ++G + T L + E ++ + + L Sbjct: 375 ELGASLGVAIAPAHGTTADDLTQSADIALYAAKDAGR-STYKLFETAMADEVQLRRSLEI 433 Query: 494 TIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R AL++ + +Y QP + + G + ++ G+++P F+PL + L Sbjct: 434 DLRRALNREEFEVYYQPQVDAKSGDYSGAEALIRWRHPQRGMLSPVVFIPLAEELGLIGP 493 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + T P +VNL P ++ + + + + + P + LE Sbjct: 494 IGNWVLRQACRDAVTWPS---HLSVAVNLSPAQMMDRRLPKSVKSILNETGLDPARLELE 550 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE N ++ + +L G I++DDFGTGY++ L R + IKID F+ I Sbjct: 551 ITETSLIGNDVQALAVLNELRAMGIAISLDDFGTGYSSLSYLHRFPINRIKIDRSFIDRI 610 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ A IV++I L + + + AE +E ++Q + G +LQGYL +P P ++ Sbjct: 611 PTDVDSAAIVQAIAKLGGSLGMKITAEGIENEEQWSFSKTEGCDHLQGYLFSKPIPGSE 669 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 103/440 (23%), Positives = 179/440 (40%), Gaps = 16/440 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLR 356 + + R A D LT L N Q +F Sbjct: 365 FISFGVDITERKLSEERITYLAYYDALTGLANRTLFIDHANQALKNHKSTETLLAFYFFD 424 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 IDN +F++ G ++ + L +M E + + + G E ++ + Sbjct: 425 IDNFKFINDSLGHTKGDILLQMVGARLKRVMTEVDTVARFGGDEFAILKVDVSNKSSAAE 484 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + S+ H L + T LL ++ Sbjct: 485 FAQKILDILSQPFHIMGRDLFTTISMGIALSPNDGVTSAELLKNSDMAMYKAKELGRN-N 543 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + ++ K++ + N++R A+ +LLL+ QP + + G + ++ + Sbjct: 544 YKFYTNELILRSEKRLYIENSLRKAIQNEELLLFFQPKISTITNQVCGAEALIRWKHPER 603 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNI 589 G + P +F+P+ + R VLE + + S+N+ L + N Sbjct: 604 GWVPPIEFIPVAEDSGIIERIGDWVLEEACRLKKQWSEKNLPSFPLSINVSGKQLARANW 663 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + R+ +Y I+P+ + LE+TE N E S+ E L + G +++IDDFGTGY++ Sbjct: 664 SHRVQATILQYGINPEEIELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGYSSL 723 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK++ AD+IKID FV D+ N D I ++I ++A + L V+AE VE Q+ LLH Sbjct: 724 SYLKKINADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRDLLH 783 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 LG +QGYL +P P + Sbjct: 784 DLGCHMIQGYLYSKPLPEDE 803 >UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BNY2_9PROT Length = 744 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 100/496 (20%), Positives = 204/496 (41%), Gaps = 26/496 (5%) Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRS 315 T + + ++ ++ ++ L++L L+ + + Sbjct: 241 HKALQEGTQELIKHGEYHADKRLVKKSGDIIFVSLSLSILKDEKGNPTALVGYCQDITKR 300 Query: 316 EWLNRRW-------HLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNL 360 + + H QA D LT LPN + EQ + + +D+ Sbjct: 301 KEAEEKLYEQKNILHYQAHHDELTQLPNRTFFNERLEQAIEKAKRNKTLIALFYIDLDHF 360 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + ++ L +++ + L +L G E L++ + + Sbjct: 361 KQINDSLGHEVGDIVLKITAERLKNKIRKEDTLSRLGGDEFTLIIEELNIAKDVSLLAQK 420 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + I+ + L + + + + LL ++ Sbjct: 421 IIEDLEKPIYIDTHTLYISSSIGISIYPDDDTDAKNLLKYADSAMYKAKEEGRN-NFQFY 479 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMT 534 ++ + V + ++R AL + ++Y QP + G + ++ G++ Sbjct: 480 SSEMTELAFEHVAMEASLRQALQNEEFVVYYQPQMDGRTDRLVGMEALVRWNHPTLGLVQ 539 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRI 593 P KF+P+ + L + D V++S + D P ++NL L +K+ + Sbjct: 540 PYKFIPIAEKNGLIVQIDQWVMKSAMTQFVAWYKDGLNPGVLAMNLAVKQLQKKDFIDTM 599 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 L K P+ + LE+TE Q +N + ++ ++Q+ + G +A+DDFGTGY++ LK Sbjct: 600 SNLLKSTQCKPEWIELEVTESQIMTNPQEAIKILKQISEMGIELAVDDFGTGYSSLSYLK 659 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 RL D +KID F++D+ + D I +S+ L+K+ +L V+AE VET +Q+ L + G Sbjct: 660 RLPIDKLKIDRTFIQDLPDDEEDVGITKSVIALSKSLNLKVIAEGVETDEQKNFLVENGC 719 Query: 714 QYLQGYLIGRPQPLAD 729 Q +QGYL +P + Sbjct: 720 QNIQGYLYSKPITANE 735 >UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ25_9GAMM Length = 818 Score = 623 bits (1607), Expect = e-177, Method: Composition-based stats. Identities = 100/470 (21%), Positives = 183/470 (38%), Gaps = 19/470 (4%) Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + E ++ ++ + + R + L +A D LT L Sbjct: 334 ELALIDRDGLEIPVSEVIIAHRGPDGEVQFFSAIARNISERKRLEEELAYRASHDALTCL 393 Query: 335 PNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN L +Q + +D + ++ G +R++ + Sbjct: 394 PNRSLLLDRMQQALAYARRYNHRVGVLFVDLDRFKRINDTLGHHAGDTILRTVAERICQG 453 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 ++ ++ + + G E +++ + L +V+ + S I N + + Sbjct: 454 VRRSDTVSRHGGDEFVVIAAQVFDSNDLASIVSKIRKTVSEPIKVKNRQVVLTCSIGIAL 513 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + E LL Q+ + + ++ Q+ + + L +R A+ G+ Sbjct: 514 YPFDGEDTDTLLKNADTAMYQAKENGRND-FQYYTKEMNAQSHEMLNLEEELRRAVKAGE 572 Query: 504 LLLYAQPIRNKEGEGY---DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 +L+ QP + + + ++ + G++ P F+P++ + L V+ + Sbjct: 573 FVLHYQPQVDLQTGALSRLEALIRWQHPERGMLAPGTFIPVLEETGLIEPVGEWVVREAV 632 Query: 561 KWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + A + +VNL NIA I R+ I P + LEITE ++ Sbjct: 633 RQCAVWKEMELPPVTVAVNLSVRQFANLNIAEAIERIVTEAGIPPACLELEITESVLMAD 692 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 A + L + G R+A+DDFGTGY L+RL + +K+D FV D+ + A I Sbjct: 693 AFDGAEALRALSQRGLRVAVDDFGTGYCALHYLRRLPVNTLKVDHSFVSDLEGDPTTAAI 752 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V +I L VVAE VET Q LH+LG QGYL RP P + Sbjct: 753 VSAIITLGHDLGCKVVAEGVETLAQCNHLHRLGCDLAQGYLYYRPCPPEE 802 >UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 Length = 1578 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 99/443 (22%), Positives = 184/443 (41%), Gaps = 19/443 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLR 356 +L ++ + + A DPLT LPN R L + + + Sbjct: 1129 MLGILTDVTERKQAEAQIENLAYYDPLTALPNRRLLLDRAENALALAQRSKHFGAIVLID 1188 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ- 415 +D + ++ G ++ + + L +++++ + +L G E +++L + L Sbjct: 1189 LDGFKTLNDARGHDSGDRLLQMVAKRLADSLRDSDTVARLGGDEFIVLLPELAHDRELAA 1248 Query: 416 -------HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + F E + L + Q+ Sbjct: 1249 RLGLGVGEKIRQALATPFTLEAEQVQISGSIGITLFPKLNEKVSDLFKEADTAMYQAKKA 1308 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARL 526 E + + + L +R+AL+Q +Y QP + G G + +L Sbjct: 1309 GRDKV-CLFESQMQLEVESRFALEADLRSALEQKQFQVYLQPQVDSHGVWIGAEALLRWN 1367 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 G + P+ F+P+ + L VLE + ++LA R ++N+ P Q Sbjct: 1368 HPGRGFIPPNIFIPIAEEIGLIGGIGDFVLEQVCQYLARLQQLGLTLRIAINVSPRQFRQ 1427 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N A I L + P + LE+TE + ++ + +L G ++DDFGTGY Sbjct: 1428 ANFAKEIKNLLACTGVDPYRLTLEVTEGLIVEDTHQAIATMFELQTLGIHFSVDDFGTGY 1487 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKRL + +KID FV+D + +A +V +I +A+ +L++VAE VET++Q Sbjct: 1488 SSLSYLKRLPLNELKIDRAFVQDAPQDLNNAALVEAIISVARTFNLAIVAEGVETEEQVQ 1547 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L +LG + QGY GRP P+ + Sbjct: 1548 FLAQLGCNFYQGYFYGRPMPIDE 1570 >UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3EBJ4_GEOLS Length = 693 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 91/446 (20%), Positives = 172/446 (38%), Gaps = 16/446 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------- 351 ++ + R + + A D LT LPN L+ Q + Sbjct: 222 KGHIEAIVGIGRDITDRKKAEQEILQLAHYDTLTGLPNRSLLQDRLSQALSLANRGNVTL 281 Query: 352 -FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +D + ++ +G + ++ + R L ++ + + ++ G E +++L+ Sbjct: 282 AVLFLDLDRFKHVNDAFGHQIGDLLLQEVSRRLKDCVRATDTVSRIGGDEFVIILTNLIK 341 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + S R L G + + + LL Q+ A Sbjct: 342 CSQAGSIAAKIISSMSRLFQLGGHELYSGTSIGIALYPTDGNDVDTLLKHADMAMYQAKA 401 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + +++ L +R A++ +L L QP + G + +L Sbjct: 402 SGRG-TFKFFSPEHNEKMLQRMQLEQALRRAIEHQELSLDYQPQIDSATGSINGLEALLR 460 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 G++ P F+ + + L VL + + R +VN+ P Sbjct: 461 WQHPQLGLLLPGLFITIAEETGLIIPLGEWVLRTACRQARAWQRAGYHRLRIAVNISPRQ 520 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q+ + I + + P+ + LE+TE + + + ++ L + G +AIDDFG Sbjct: 521 FQQRGLIPMIDAILQETGCDPRGLELELTETTLMDSPKEATALLKALKRRGISLAIDDFG 580 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK D +KID FV D+ + D+ IV +I +A L VVAE VE Sbjct: 581 TGYSSLSHLKHFPIDRLKIDRSFVNDLTRSREDSAIVEAIIAMAHRLGLEVVAEGVEHPD 640 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A+L G + QG+L + + Sbjct: 641 QHAILSDWGCKTCQGFLYSKAVSTEE 666 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 109/476 (22%), Positives = 185/476 (38%), Gaps = 23/476 (4%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 N G TE + + + + R A D LT LP Sbjct: 524 FINTRKDGGTYTELATIAPIKQADGSVSHYVAIKEDITGRREAEARIRQLAYYDTLTGLP 583 Query: 336 NFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + A L ID+ + ++ G + +R + + L + Sbjct: 584 NRSLMWDRLRHAIAASARSGASGMLMLLDIDHFKLLNDTQGHEVGDALLREVAQRLRGAL 643 Query: 388 QENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNILNS---RQIHWN--NTGLDMGY 437 +E + + ++ + +V+ + + + L+ + +G Sbjct: 644 REEDTVARVGDDDFAIVVENLGADRDEAIGRAEKIAEHLHRCVTAPCELGLASGPYHVGA 703 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F G +L Q ++ L + E + + L +R Sbjct: 704 SLGLTLFRGRNAAADAVLKQAEVAVARAKDDGRNL-IRFFSEAMQAVVAARAELELKLRA 762 Query: 498 ALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 AL LY QP + G + ++ +G +++P F+PL + L V Sbjct: 763 ALACNGFRLYYQPQLDRNGRVIGAEALIRCFDAEGEMISPAAFIPLAEETGLIVPIGEWV 822 Query: 556 LESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 LE+ L G S+N+ Q + G++ +R+ I P + +E+TE Sbjct: 823 LETACAQLRAWQRTPSTAGLSLSINVSARQFHQPDFVGKVAAAIERHRIRPGGLEIELTE 882 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + E+++ + Q+ G R A+DDFGTGY++ LKRL D +KID +FV+D+ + Sbjct: 883 SVVIGDIETTVLRMRQIKALGVRFALDDFGTGYSSLSYLKRLPFDQLKIDQMFVRDMEKD 942 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T IVR+I L+++ L VVAE VET Q LL G + QGYL GRP P+ D Sbjct: 943 TSSEAIVRAILALSRSLDLKVVAEGVETAAQHELLLTRGCELFQGYLFGRPVPIED 998 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 96/485 (19%), Positives = 177/485 (36%), Gaps = 20/485 (4%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 R W + + E+ + V + + + Sbjct: 1013 WRSLIEQGCWQGEIFNRRKNGEIYP-----EWLTVNSVRDENGSVVNYVAIFSDISAIKS 1067 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGL 369 RR A D LT +PN L Q+ + + +DN + ++ G Sbjct: 1068 SQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVINDSLGH 1127 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIH 427 + ++ L +++++ L +L G E + VL+ E I+ Sbjct: 1128 DVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNSVAARIVDFLGASFS 1187 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N+ L + F + + LL ++ + + + Sbjct: 1188 INDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQ-YQFFADEMKVIALQ 1246 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L +R AL+ + QP + E G + +L G ++P F+P+ Sbjct: 1247 RLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSPAHFIPIAES 1306 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L V +L+ +A PR ++N+ L A ++ IS Sbjct: 1307 CGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFAAKVGSWLDSSGIS 1366 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + + +E+TE + + G +++IDDFGTGY++ LK+L +KID Sbjct: 1367 SELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKKLPIHELKID 1426 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV I D I ++I D+++A + VVAE VE+++Q +L + G +QGYL R Sbjct: 1427 RSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEGCDMVQGYLFHR 1486 Query: 724 PQPLA 728 P Sbjct: 1487 PLSPE 1491 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 88/456 (19%), Positives = 180/456 (39%), Gaps = 16/456 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-- 345 E++ + + + + + + QA D LT LPN + Sbjct: 628 EHASICPMRDEEGYITHFIAVKEDITQQKHNEEILAHQANYDALTDLPNRTLIFDRLRQA 687 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + + +D+ + ++ G + ++ L +++ + + +L G Sbjct: 688 ITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRLGGD 747 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E LL++ + + +++ N + + + + + + + L+ Sbjct: 748 EFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQDGKNVSTLVR 807 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK-- 514 + + + ++ + ++++ N +R A+ + +L + QP + Sbjct: 808 NADTAMYAAKQEGRNV-FAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVYQPFIHLNT 866 Query: 515 -EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 + G + ++ + G + PD+F+ + + L +L + +A G Sbjct: 867 SQIVGAEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVANWHQQGNNG 926 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VN+ P L N+ II +S + LEITE I+QL+ Sbjct: 927 LWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQSLIKQLNH 986 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 R+AIDDFGTGY++ LKR ++KID F+ D+ + +V+++ +A L Sbjct: 987 LKIRLAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHGLGL 1046 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE +ET Q L G Y QGYL +P P A Sbjct: 1047 VVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPA 1082 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 96/450 (21%), Positives = 184/450 (40%), Gaps = 18/450 (4%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------- 345 + ++ + + + A D LT LPN + E Sbjct: 235 VVARAADGRALRFIGTQIDITARKAAEGQVAHMARHDGLTDLPNRALFYERLEIRLADLH 294 Query: 346 -QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + CL +D + ++ G +R++ + +++ ++ + +L G E ++ Sbjct: 295 LNGGACAVLCLDLDRFKTVNDSLGHAAGDFLLRAVAHRIRAVLRADDMVARLGGDEFAVL 354 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 ++ + R + + L + I + L +G + + + L + Sbjct: 355 VADADDPARAETLAARLIAAVQAPIPFGKRRLKVGLSVGIAQAPSHGFDSETLFRRADLA 414 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 ++ E + + L +R A++ +L+LY QP + G Sbjct: 415 LHRAKTEGRN-THRVFEPAMDEAEAARRDLERDLRQAIEGDELILYYQPQVSTGTGRLLG 473 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 ++ ++ G++ P+ F+PL + L VL + + A + +VN Sbjct: 474 FEALVRWEHPTRGLVPPNAFIPLAEESGLILPLGEWVLRAACREAARWA---HPLKVAVN 530 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P Q ++ R++ + ++P + LEITE ++ ++ + +L FG IA Sbjct: 531 LSPRQFQQADLPERVLAILTETGLAPTRLELEITETLIINDMARALGILRRLKAFGVSIA 590 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L+ D IKID FV + + A+IVR++ L ++ +SVVAE Sbjct: 591 MDDFGTGYSSLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEG 650 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q L QGYLI +PQP+ Sbjct: 651 VETDAQMRFLAAEACDEAQGYLISKPQPIE 680 >UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3A4_9BURK Length = 1083 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 108/525 (20%), Positives = 194/525 (36%), Gaps = 29/525 (5%) Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 C DF + ++ G P + A++ F + Sbjct: 538 AFCRSTHYDFYEVIGEQLGMLLDAPGES---APGETIARALADKESWQGEVRFRRRSGES 594 Query: 289 YSLAFILAVLISF-----SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA---- 339 Y +++ + + + + R A D LT LPN Sbjct: 595 YPAWLMVSAVREGGKGGAVTNHIGIAIDITDRKRNEERIRFLAHHDVLTELPNRSLCVQR 654 Query: 340 ----LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 LEQA + + +D + ++ G + +RS+ L+ ++E + + + Sbjct: 655 LQAGLEQAARTGEQLAVLFIDLDRFKAINDTLGHHIGDGLLRSVAARLVQSVREGDTVSR 714 Query: 396 LPGSELLLVLSGPETEGRLQHMVNI----LNSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 L G E ++V+ E ++ +V L + L + + + L Sbjct: 715 LGGDEFVIVMRQVEGAQQVLRVVEERLIPLIRQSHPVEAHELSVSCSVGIAVYPEDGADL 774 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ + ++ +A + + + ++R AL++ + L+ QP Sbjct: 775 DELMRRADAAMYEAKTAGRDMA-RLYSLETDRRVQARQAMEQSLRRALERREFALHYQPR 833 Query: 512 RNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L G + P +F+P+ + L VL+ A Sbjct: 834 MSARTGMPTGLEALLRWRHPSLGEVLPGEFIPIAEEAGLIRAIGAWVLDQACAQWAAWRA 893 Query: 569 -----DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 G SVNL L + I L R+ + + + LEITE Q NA + Sbjct: 894 SEAGGGLAGLPVSVNLSAAQLADPLLVPDIAALLARHGMPARCLELEITESQLMDNAGVA 953 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + L + G +++IDDFGTGY++ LKR D +K+D F++D++ + D I R+I Sbjct: 954 QGQLAALKQLGVQLSIDDFGTGYSSLAYLKRFAIDKLKVDKSFIRDMLASPADMAITRAI 1013 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L + L VVAE VE +L L +QGYL R P Sbjct: 1014 IGLGRTLGLQVVAEGVEDAATLRMLESLDCDEVQGYLFSRALPPE 1058 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 90/444 (20%), Positives = 184/444 (41%), Gaps = 16/444 (3%) Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSF 352 + + + + D LT LPN L Q E + Sbjct: 205 MTNVVYLLTHDIQEERDHEVALYRLNNYDGLTHLPNRNLLYQQLESALVNARKRHRQFGL 264 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D + ++ ++G + I+ + + + + LY+L G E ++VL Sbjct: 265 LYLDLDGFKVINDNFGHRVGDELIQRVAERIKGSIPSSACLYRLGGDEFVVVLENTNEIE 324 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 L+ + + S + + + + + + LL ++ + Sbjct: 325 ELESIAQSIMQNASNTYPVAKMEMMITASIGIASYPQHADDVDNLLKNADAAMYRAKSTG 384 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 H + E+ ++ + L +R A+++ +L+ QP ++ G + ++ + Sbjct: 385 HNM-YCVYEDHMADNINAHLTLGGGLRKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWV 443 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLL 585 + G+++PD+F+PL + L V+ + L + SVNL + Sbjct: 444 HPELGMISPDQFIPLAEESGLILPLGEWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFM 503 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q ++ + R + + P+ + LE+TE ++A+ S+ + K G ++IDDFGTG Sbjct: 504 QADLVDMVQRALEETGVDPEYLELELTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTG 563 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK+ +KID F+ D+ + + IV++ +A + +L V+AE VE + Q Sbjct: 564 YSSLAYLKKFPIQTLKIDRSFIHDLGLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQV 623 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 +L+ Q +QGYL +P D Sbjct: 624 DVLNGYDCQEVQGYLFSKPLSSDD 647 >UniRef50_C5T452 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T452_ACIDE Length = 1051 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 117/570 (20%), Positives = 207/570 (36%), Gaps = 43/570 (7%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIF 251 ++ A G E R ++ + V L+ I GY Sbjct: 472 ISARKQMEASLRGNELRQRSILQRLPVGVCLVQDDGRMTFRNARFVEICGYSQDDLPTSE 531 Query: 252 TLGVGKLRYP-------------FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 P + T+ Y G + +A + Sbjct: 532 DWWRAVYPDPEYRERTRAAWAAACASAREGSGTIASGEYTIRCKNGQQRVVEIAGVTMD- 590 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 L+ MV + + A DPLT LPN R L + Sbjct: 591 ---DGHLVTMV-DLSQRKADEEEIRYLAFYDPLTRLPNRRLLMDRLQQALATSARHQRSG 646 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-- 408 + L +DN + ++ G ++ + + L + E++ + + G E ++VL Sbjct: 647 ALLLLDLDNFKTLNETRGHERGDLLLQQVAQRLRQCVHEDDTVARPGGDEFVVVLEDLGD 706 Query: 409 ---ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 E R + + + + + F G +ET+ LL + Sbjct: 707 NPEEAAARSEEIGQKILAALREPYQLDAEVHHSSLSMGITIFSGMRETVDELLKRADLAM 766 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKEGEGYDE 521 Q+ L + + + + + +R L QG LY QP + G + Sbjct: 767 YQAKGAGRD-TLRFYDPRMQAAVSARAAMELDMRVGLAQGQFELYYQPQIEHGRITGAEA 825 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNL 579 +L G ++P +F+P+ + L VL++ + LA +VN+ Sbjct: 826 LLRWRHPQQGFISPAQFIPMAEESGLILPLGEWVLQAACRRLAQWSQQPGLAELDLAVNV 885 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P Q +++ + LE+TE + E ++ + QL +G ++ Sbjct: 886 SPRQFHQGGFVPQVLAALAGSGADGHRLKLELTEGLLLEDVEDTIEKMGQLRGYGVGFSL 945 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL D +KID FV+D++T+ DA I R++ LA + L V+AE V Sbjct: 946 DDFGTGYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIARTVVALATSLGLRVIAEGV 1005 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET+ Q+ L + QG+L+ P +A+ Sbjct: 1006 ETEAQREFLARSHCHAWQGFLLSPPLAVAE 1035 >UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=Q2BCE5_9BACI Length = 744 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 106/568 (18%), Positives = 200/568 (35%), Gaps = 28/568 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV-LLLLLCTPYEND 237 + R+I F+ +L+ E R L L+ + ++ Y N+ Sbjct: 171 GIPVLDKKGRLIE---FSSVLFDITDRQ--ESEDRYRGLVELSPDFIGVISGNVIVYINE 225 Query: 238 FIAGYL------VPVFFIIFTLGVGKLRYPFLNLTWAVS--TLCLLNYNQNFLQGVETEY 289 + + I + + N A T + + Sbjct: 226 AGCRLIGASSKEQLLGKPIINFVNKEATFEIYNTLLAADSDTAGKRRFEVQAKRLDGVLV 285 Query: 290 SLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-- 346 + + + + R + R A D LT LPN + + + Sbjct: 286 DVEVSSMPIRYGGREAVQVIGRDITERKKSERTMEYMAFYDTLTGLPNRNEIMKQLQGIL 345 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +D + ++ G ++ L + + + G E ++ Sbjct: 346 NSGKEKAAVLFLDLDRFKIINDTKGHSTGDLLLKKAGIRLEDTVGSLGLVARQGGDEFII 405 Query: 404 VLSGPETEGRLQHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + E + I+ + + + + L+ Sbjct: 406 LFEEKEKQQIEGAARAIIEQFNKPFILEGEEFYITPSIGISLYPEHGTDQETLIKHADTA 465 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 + + G ++++ L N +R ALD+G+LLL+ QP + + +G Sbjct: 466 MYLAKERGKN-NFQFYTSSLEGLASRKMALENGLRKALDRGELLLHYQPQIDLKTGKLKG 524 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSV 577 + ++ + DG ++ P +F+PL + L +L + + + G +V Sbjct: 525 TEALVRWQRPDGHLVPPGEFIPLAEETGLIVPMGKWILRTACEQHKRWKLEGAGSVPIAV 584 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L + + I P + LEITE N E + + +L K G R+ Sbjct: 585 NISVRQLEDPEFIMYVKTVLSSCDIEPGCLELEITES-IMQNIEKATIALNELKKIGIRL 643 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFG GY++ LK L D IKID FV DI+ + +V++I D+ + SVVAE Sbjct: 644 SIDDFGKGYSSLSYLKHLPIDTIKIDKSFVDDILDPAQNGSLVKAIIDMGLNLNFSVVAE 703 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +E ++Q L + QGY RP Sbjct: 704 GIEHKEQAEFLLENNCPVGQGYYFSRPV 731 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 102/465 (21%), Positives = 195/465 (41%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + + QA DPLT LPN Sbjct: 761 RKNGELYPSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTL 820 Query: 340 LEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 E + + L +D + ++ G + ++ I + L +++ + Sbjct: 821 FENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVD 880 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +++L G + N L + + + Sbjct: 881 TVARLGGDEFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDG 940 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ +S A ++ ++ Q ++++ L + +R A+++ ++ L Sbjct: 941 TDVSTLIRNADAAMYRSKAKGRNRV-EAYTRDLTAQASERIALEHELRRAVERNEMSLCF 999 Query: 509 QPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + ++ G + P+ F+ L + + VLE + + Sbjct: 1000 QPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQA 1059 Query: 566 HPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + S+NL L ++A RI +L K + + + LEITE S AE ++ Sbjct: 1060 WKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEAL 1119 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + QL K G ++AIDDFGTGY++ LKRL DI+KID F++ + + DA I R+I Sbjct: 1120 AVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAII 1179 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L ++ L+++AE VE Q QQ L G + +QGY++ P P + Sbjct: 1180 ALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEE 1224 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 101/473 (21%), Positives = 176/473 (37%), Gaps = 27/473 (5%) Query: 282 LQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 ++ + Y +A + + + + + H A D LT LPN Sbjct: 440 VRKDGSAYLELATIAPIKDAGGTVTHYVAVKEDITQRKQSEALLHRLAYFDALTGLPNRA 499 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L +E+ + ID ++ G + + L ++E Sbjct: 500 LLHDRIAQAIRSGVRRESFGMLMLVDIDRFRQLNDTLGHAAGDRLLCEVAARLRASVREE 559 Query: 391 EKLYQLPGSELLLVLS-----GPETEGRLQHMVNIL---NSRQIHWNNTG---LDMGYGA 439 + + + + +++ + +H+ L + T Sbjct: 560 DTVARHGDDDFAVLVERIGETEADALSHAEHVARKLQRALQQPYVLGGTEGDRHFATLSF 619 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F +L+ LL Q ++ + + L + AL Sbjct: 620 GISLFHDGVSSLESLLKQAEVALYRAKQDGRDIV-RFFNPEMQAVVDAHARLEARMHEAL 678 Query: 500 DQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + L+ QP N+ G G + +L G +++P +F+PL R L VL Sbjct: 679 EANAFRLFFQPQVNRRGVVIGAEALLRWPLDGGAMVSPAEFIPLAEDTGHIVRLGLWVLR 738 Query: 558 SLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 S LA + + +VN+ Q + + + I P + LE+TE Sbjct: 739 SACAQLARWQMNEGTRHLKIAVNVSARQFHQPDFVASVKDSVRAAAIDPCRLELELTESA 798 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 S+ + ++ + +L G R A+DDFGTGY++ LKRL D +KID FV+D+ + Sbjct: 799 ILSDVDETIRRMNELRALGIRFALDDFGTGYSSLSYLKRLPFDQLKIDQSFVRDMAEDES 858 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV +I L+ A L VVAE VE +Q+ L + G QGYL G+P P+ Sbjct: 859 SEAIVLAILSLSHALGLEVVAEGVEMPEQRDFLRQHGCDSFQGYLFGKPLPME 911 >UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IYN4_9CHRO Length = 837 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 97/467 (20%), Positives = 185/467 (39%), Gaps = 22/467 (4%) Query: 281 FLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 E + L F A L ++ M + + AL D LT LPN Sbjct: 360 IDTSDEKQKILNFNSAPLEQLSDGRRVVISMAIDVTERKKAEEKLRHNALHDTLTKLPNR 419 Query: 338 RALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 Q + + +D + ++ G ++ + I L ++ Sbjct: 420 LLFIDRLNQSIERIKRHPTYSFAVLFIDLDRFKLINDSLGHIIGDRVLIQIATKLTSCVR 479 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 + + ++ G E +++L+ E++ + H+ + I + + Sbjct: 480 SLDTVARIGGDEFIILLNDLESKIKAIHIAERILETLKLPIIIEQRNIVISASIGIAFNS 539 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 N E ++ ++ + ++ Q K++ L +R L++ + + Sbjct: 540 QNNEEADDIIRNADLAMYKAKEQGKAR-YMIFDSVMYAQAQKRLELETNLRIGLEKQEFI 598 Query: 506 LYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 +Y QPI +K+ G++ ++ G++ P++F+P+ L VL + Sbjct: 599 VYYQPIISLVDKKLVGFEALVRWQHPQKGLIPPNEFIPVSEDTKLIIPIGEWVLLESCRQ 658 Query: 563 LATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 LAT + S+NL L +I ++ + ++ ++ LEITE N Sbjct: 659 LATWQQKYPECSMLKMSINLSIKQLKNNTFVSKIEKILDQTGLNGNSLKLEITESILMEN 718 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + Q+ G ++IDDFGTGY++ L L D +KID FV ++ + + I Sbjct: 719 ILELRDILRQIKSLGIELSIDDFGTGYSSLSYLHNLPVDNLKIDRSFVIEMNQSEGNYRI 778 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + +I LA LSV+AE +ET+Q L L ++ QGYL +P P Sbjct: 779 IETIITLAHQLGLSVIAEGIETEQDLQTLRDLQCEFGQGYLFSKPLP 825 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 93/456 (20%), Positives = 180/456 (39%), Gaps = 17/456 (3%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----- 343 + V + + + H A DPL+ LPN R L + Sbjct: 873 LETIVTVRDETGAMVNYIGVAADISSLKEAEEHIHHLAYYDPLSALPNRRYLMERAEYAL 932 Query: 344 ---PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 ++ + L +D+ + ++ G + + + + +E + + +L G E Sbjct: 933 ALAERRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDE 992 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 L+L + + + + + + + + + + + LL Sbjct: 993 FALLLPDLG-RDAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETLLRN 1051 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 + + ++ ++ +L+ +R A+ G+L + QP + Sbjct: 1052 ADTAMYHAKQQGRNQ-FRFYDPGMNVDILARLTVLSELREAIPAGELRTFFQPEIDLANG 1110 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGP 573 G + ++ G+++PD+F+P+ +L VLE + LA D+ Sbjct: 1111 TLVGAEALVRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPI 1170 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 VNL + R+ L RY + ++ LE+TE +M +++L Sbjct: 1171 TVGVNLAARHFRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIAL 1230 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++IDDFGTGY++ LK L +KID FV+DI + D I ++ L + L Sbjct: 1231 GCSLSIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLK 1290 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET++Q+ +L + G + QGYL RP + Sbjct: 1291 VIAEGVETEEQRRILLEQGCDFGQGYLFSRPLSSKE 1326 >UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8B4_NITMU Length = 1109 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 95/488 (19%), Positives = 184/488 (37%), Gaps = 21/488 (4%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS-----VCLLYMVRIYHRSE 316 L+ L + Q L+ E F L+V + + + R + Sbjct: 607 ILSALAEAQEKGLSSGKQLELRLPGREDKWWFELSVSRKHVDSAAGLRFIVLARDITERK 666 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 +R A D LT LPN L Q + + +D + ++ G Sbjct: 667 ASEQRILHLAHYDSLTGLPNRALLADRMRVAINRAARQAKRLAVLFVDLDRFKAINDSLG 726 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + H ++ + + ++ + + ++ G E +++L+ ET + + S+ Sbjct: 727 HDVGDHLLKVVAERMQTSIRSVDTVSRVGGDEFVVLLNEIETAEDAARVAQKIIDGLSQP 786 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 L + + N + LL + H E ++ + Sbjct: 787 YQIEKHELLLTGSIGICIYPDNGKEPNILLRNADASMYTAKEAGHNR-YQFYSEDMTARA 845 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ L + +R A+++G++ L QP G + ++ G+++P +F+P+ Sbjct: 846 IERLSLEHDLRGAVERGEMFLVYQPQIELGTSRVIGVEVLMRWRHPARGLISPVRFIPVA 905 Query: 543 AQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L L + SVN+ + Q + G I + Sbjct: 906 EDTGLILSIGEWGLRESCRQAQLWYERGLLNACISVNVSAVQFRQTDFVGIIENALQESG 965 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++P + LE+TE AE ++ + +L G ++AIDDFGTGY++ L++ D +K Sbjct: 966 LAPTNLELELTESAVMQGAEPALNKLRELDALGVKVAIDDFGTGYSSLAYLRQFTVDRLK 1025 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D+ N I +I + ++AE VET+ Q L + + QGYL Sbjct: 1026 IDQSFVRDVPGNNDAEAIAAAIVAMGLNLGFRIIAEGVETEAQAEFLQSVLCKEGQGYLF 1085 Query: 722 GRPQPLAD 729 P + Sbjct: 1086 AWPMTAIE 1093 >UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J4K1_COMTE Length = 822 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 100/522 (19%), Positives = 198/522 (37%), Gaps = 18/522 (3%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 + T + G + + G + + L + + N Sbjct: 287 VNFLNPIAEAMTGWYGRRAIGVPIEQVMPLRDSFDGHVLQNPIYLALKEQRIVGMALNSQ 346 Query: 281 FLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + A + + L + + + + + A DPLT LPN Sbjct: 347 IACRDGRVLEVEDSAAPIWDQAGKLTGAIIVFHDVSEARAMALKMTHLAHHDPLTNLPNR 406 Query: 338 RALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L+ + L +D+ + ++ G + + + + L ++ Sbjct: 407 MLLQDRTSQALQQAGRNGGQVALFILDLDHFKTINDSVGHSIGDQLLLQLAKRLQQFVRN 466 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 + + + G E ++++ + + L + + D+ + Sbjct: 467 GDTISRQGGDEFIILIPEIRHVDEVSQLGERLLEACAEPFLLDGVRYDLSMSIGISLYPD 526 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + + L Q+ + + + +L +R A+ +GD + Sbjct: 527 DADNQEALYRHADAAMYQAKQEGRGR-FRFFSQEIEHTLYARHMLERHMRVAVAEGDFEV 585 Query: 507 YAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 + QP + + G + ++ + DG +++P +F+PL + L VL + Sbjct: 586 HYQPKIDLASQQVVGAEALVRWRRQDGSLISPAQFIPLAEETGLIVPLGRSVLLKACQEG 645 Query: 564 ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ + L + N + + ++ I P + LEITE + +++ Sbjct: 646 RRWHEQGYLIHIAVNVSAVQLAKSNFTAMVSEIIEQTGIMPGYLELEITEGVLAKDVKNT 705 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 I +LHK G I+IDDFGTGY++ LK+ D++KID F ++I+T A IV +I Sbjct: 706 FAIINELHKIGVSISIDDFGTGYSSLSYLKQFPIDVLKIDQSFTREILTEKSSAAIVAAI 765 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 ++A L +VAE VETQ Q LL ++G +QGYL RP Sbjct: 766 INMAHGLDLRLVAEGVETQAQAELLQQMGCTVMQGYLYSRPL 807 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 100/474 (21%), Positives = 180/474 (37%), Gaps = 31/474 (6%) Query: 278 NQNFLQGVETEYSLAFI-LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 ++L F + + + + +R A+ D LT LPN Sbjct: 626 EADYLLKDGQRIPYLFTGVRFEYDGRRGFVGVGYDISERKRAEQRIRHLAMHDGLTDLPN 685 Query: 337 FRALEQAPEQEAGKSFCCLRIDN---------------LEFMSRHYGLMMRVHCIRSICR 381 +++ EQ ++ + ++ YG + +++ Sbjct: 686 RNLIQERIEQAIVRA-------RRGGRLLALLYLDLDRFKVLNDGYGHLFGDAVLKTASE 738 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 LL L++E + + +L G E L++L+ E + + I + + Sbjct: 739 RLLKLVREGDTVARLGGDEFLILLADLEQPADADAVARKIVGSLDCPIVVQERKIHLSGS 798 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F + ET L+ ++ +S +T ++V L +R A Sbjct: 799 IGVSLFPRDGETADELIDNADMAMYRAKELGRN-TYQFFTRAMSLETQRRVDLEIKLRGA 857 Query: 499 LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 G L L QP + E G + +L + GI++P+ F+P+ L V Sbjct: 858 ATAGQLQLVYQPKVSLENGGISGCEALLRWHHPELGIVSPEHFIPIAEDSGLIVPIGDWV 917 Query: 556 LESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + +VN+ LQ+++ + R + + + LE+TE Sbjct: 918 LRTACMQARAWMDAGLPPVCVAVNVSTRQFLQQDVVAWVTRTLRETGLPAARLELELTES 977 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + E I+QL G +++IDDFGTGY++ LKR + D +KID FV++++T Sbjct: 978 LIARDIEKVTATIDQLKDIGVKLSIDDFGTGYSSLNYLKRFRVDTLKIDQSFVRNMLTEM 1037 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D IV ++ LA V+AE VET+Q L G +QG+ P Sbjct: 1038 EDETIVLAVIALAHNLKFKVIAEGVETEQHSRFLCSNGCDEIQGHYFSEPVTAE 1091 >UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Geobacter RepID=C6DZH0_GEOSM Length = 853 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 93/470 (19%), Positives = 181/470 (38%), Gaps = 20/470 (4%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR------IYHRSEWLNRRWHLQALTDP 330 + + + AV L + R + A DP Sbjct: 361 IRHRIIHKDGSVRWIVNNCAVQRQRRGDRLSITRLDGFILDVTDIKRAEENIFFLAHHDP 420 Query: 331 LTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L + EQ + L ID + ++ G + ++S+ + Sbjct: 421 LTKLPNRSTLYERMEQVICAAQKSSRNVALLFLDIDGFKQINDSMGHDVGDRLLQSVAKR 480 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWG 442 L + + + +L G E +++L E + + + + + + Sbjct: 481 LSDCTRSCDVVSRLGGDEFVVMLWDCG-EAETTVVAEKVINAGFPVLGSNVTVTPSIGIS 539 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F + LL + ++ ++ +L +R ALD+ Sbjct: 540 IFPDDGRDYLTLLKHADIAMYHAKKSGGN-NFQFFTHKLNEIAHERFMLEAELRRALDRE 598 Query: 503 DLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + +LY QP + G + ++ G+M P+ F+ + + L + ++ ++ Sbjct: 599 EFVLYYQPKVDLSTGKFSGMEALIRWQHPAHGLMLPESFIGIAEESGLLTQISKWIIPTV 658 Query: 560 LKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + +VNL + I + I+P+ + LE+TE S Sbjct: 659 CRQIQQWQQQGINSVSAAVNLSASFFQHPDFEETIEESLLQTGIAPECLELELTEATIMS 718 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + + ++ + G +++IDDFGTGY++ LK+L D +KID F+ +I + +A Sbjct: 719 DPQRVLGSMAAMKALGLQLSIDDFGTGYSSLSYLKKLPVDKLKIDQSFIHNIARDADNAA 778 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +VR++ + ++ L V+AE VE Q A L G + QGY RP P+A Sbjct: 779 VVRAVISIGRSMQLRVIAEGVENASQLAWLQAEGSEEAQGYYFSRPLPVA 828 >UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNV7_THASP Length = 884 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 98/471 (20%), Positives = 182/471 (38%), Gaps = 29/471 (6%) Query: 283 QGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + Y + L + L R + A D LT LPN R L Sbjct: 403 RKDGSVYPVEVTAFPLEVDGRTVLFNSARDISARKSAEAEVRKLAYFDALTGLPNRRLLM 462 Query: 342 QAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + Q + + +DN + ++ G + + L+ +++++ + Sbjct: 463 ERLERAQASCARQGTVGALLFIDLDNFKAVNDTVGHQEGDRLLVQVAAILVRCVRKDDTV 522 Query: 394 YQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 +L G E +++L E + + + + + ++ ++ F Sbjct: 523 ARLGGDEFIVMLEELGGEGREAAEQAAAVGSKILAALNQRFQLGSSEHRTSVSIGVSLFG 582 Query: 446 GNQETL-QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + L + ++ A+ + + + + + AL+Q Sbjct: 583 ELADEPVDEPLRRADMAMYRAKLGGRN-AVCFFDPSMLADVRARADVEAGLWIALEQRQF 641 Query: 505 LLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 +L+ QP + G + ++ G++ P +F+PL + L VLE+ Sbjct: 642 VLHYQPQVAADGAVLGVEALVRWHHPVRGLVPPGEFIPLAEECGLILPLGRWVLEAACAQ 701 Query: 563 LAT-----HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 LA +VN+ L ++ ++ +R P + LE+TE Sbjct: 702 LAAWADDPWRSR---LVIAVNVSARQFLHEDFVAGVVAALERSGADPGRLDLELTESSLV 758 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 ++ + +E L G ++DDFGTGY++ LKRL D +KID FV+DI+ + DA Sbjct: 759 TDVDKVSEKMEALKALGVGFSLDDFGTGYSSLAYLKRLPLDQLKIDRSFVRDILVDPNDA 818 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I R I LA L V+AE VE ++Q+ L + G QGYL PQP+ Sbjct: 819 AIARMIIVLADNLGLRVIAEGVECEEQRDFLARNGCSSYQGYLFSAPQPID 869 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 92/458 (20%), Positives = 175/458 (38%), Gaps = 16/458 (3%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 TE+ L + + + + R + D LT LPN + Sbjct: 382 TEWLSISSLRDTTGTASHYIGIFSDLSERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQ 441 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 E G + L ++ ++ G + + R L ++E + + + G Sbjct: 442 ALLTARRFERGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAG 501 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 +E V++ E + + S + + F N E + +L Sbjct: 502 NEFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGEAML 561 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 ++ + +++ + + +R AL + + ++ QP + Sbjct: 562 RSADAALLRAKQSGRN-TFSFYSPEMDADAARRLSIESALRDALARDEFCVHYQPQVSLD 620 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKK 571 G + +L G ++P +F+P+ + L + VL + Sbjct: 621 SGHMIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLL 680 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL P Q ++ ++ + A+ LEITE + + ++ +L Sbjct: 681 PLHVAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLK 740 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G ++++DDFGTGY++ + R D IKID FV+DIV N ++A I + + ++ + Sbjct: 741 SLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLN 800 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LSV+AE VET+ Q A L +QGYL RP P + Sbjct: 801 LSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEE 838 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 90/455 (19%), Positives = 184/455 (40%), Gaps = 14/455 (3%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + Y ++ ++ F +L+ + A D LT LPN A Sbjct: 209 SSYKKTVVIHIIFWFVGMILFRFVYNKERKARYE-LEYFANHDSLTGLPNRHAYIDKITS 267 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + + + +DN + ++ G + ++ + + L ++E + L + G E Sbjct: 268 MVNKNKNNFALIFMDLDNFKTINDSLGHTLGDMLLQKVAKRLKNEIKEYDMLSRFGGDEF 327 Query: 402 LLVLSGPETEGRLQH---MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 + + S ++E ++ ++ + + N + + + + + LL Sbjct: 328 VFLFSNVQSELTIEKTMIKIHEVLKKPFILNTYEVYTTASIGIAIYPDDAQDAELLLRNA 387 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---E 515 + + ++ +++L + + AL+ +L L QP + + Sbjct: 388 DVAMYDAKQSGRSK-YSFFNADMLNLSSNRLMLESELHKALENNELFLLFQPQVSLWNEK 446 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPR 574 G + ++ G+++P F+P+ L +++ LA Sbjct: 447 IVGVEALIRWQHPTKGLISPLDFIPIAENSGLIMPIGEWIIDQACDQLALWKDTHMSEAT 506 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 S+N+ +L +++ I +R I + + LEITE N ++ + +L K G Sbjct: 507 LSINVSAKQVLHQDLYSYIEAAIERTKIDGRFLELEITESVIMENINETVRILSRLKKLG 566 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 IAIDDFGTGY++ LK+L D +KID F+KDI + D I +I ++K+ SL + Sbjct: 567 VSIAIDDFGTGYSSLSYLKKLPIDKLKIDREFIKDIPNDKDDIAITNAIISMSKSLSLKI 626 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE ET++ L QG+ +P + + Sbjct: 627 VAEGPETKEHIEFLQNSKCDIAQGFYYSKPITIVE 661 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 92/485 (18%), Positives = 180/485 (37%), Gaps = 21/485 (4%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 + W + + Q + + + + + Sbjct: 567 QLLTHGRWQGEVQNRRKNGELYTQWMSVS-----TVRDEHDQPTHYVSVFTDITPQKEAE 621 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMM 371 +R A DPLT LPN + E E + + +DN + ++ G Sbjct: 622 QRLQHLAHFDPLTQLPNRLMVLSRLEHAIASAARAERRVAVLFIDLDNFKTVNDSLGHSA 681 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 +R++ L + + L +L G E +L+L + L Sbjct: 682 GDDLLRAVADRLGTRTRREDTLGRLGGDEFILMLEHLREPQDAAQVAQELIGLLETPFRV 741 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + + + L+ Q+ + E ++ + Sbjct: 742 AGQEVYVQASIGISLYPDDGLEVGELVRDADAAMYQAKRAGRGV-YRFYTESLTTAAQSR 800 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L +R AL+ + +L+ QP+ ++ G + ++ + + P +F+PL+ + Sbjct: 801 LALDTRLRRALENKEFVLWYQPLYRLADRCLIGLEALVRLNQPGLPPIGPAEFIPLLEET 860 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 V + + + R ++NL P + + R+ +R + Sbjct: 861 GQITTLGAWVTQEACRQGRAWLDEGLDFGRIAINLSPQEIRRGQTDERVREALERSGLPA 920 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LE+TE E + + +L G R+AIDDFGTGY++ LKR +KID Sbjct: 921 ERLELELTESGLMEQGERAEAFLHRLRALGVRLAIDDFGTGYSSLAYLKRFPVSKLKIDR 980 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+D+ + DA +V+++ + + +SV+AE VET+ Q L LG QGY P Sbjct: 981 SFVRDLPADANDAQLVQTMVSMGRNLGISVLAEGVETEAQFDYLRSLGCDAAQGYFFSPP 1040 Query: 725 QPLAD 729 +P + Sbjct: 1041 RPADE 1045 >UniRef50_C0QA93 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA93_DESAH Length = 629 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 102/478 (21%), Positives = 188/478 (39%), Gaps = 28/478 (5%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR---RWHLQALTDPLT 332 +Y+ ++ V E IL L + + E N R + A D LT Sbjct: 123 DYSWQEIRRVLGETDSLLILKKPFDNVEVLQLAHALTRKWELNNEIQGRLNQLAFYDSLT 182 Query: 333 LLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN + A + + + +DN + ++ G + +++ + LL Sbjct: 183 GLPNRTLFIENLTTTLDKAHRYKHKAALLYIDLDNFKRINDTLGHSIGDDLLKATSKRLL 242 Query: 385 PLMQENEKL---------YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 ++ ++ + +L G E ++L + + + +H N Sbjct: 243 KCLRTSDTVSRSPAGEMVARLGGDEFTVILPEVTRAEHAGVVALRIAKQLAEPLHLGNHQ 302 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + F + E ++ LL S + E+ ++ K++ + Sbjct: 303 VIVTPSIGISLFPQDGEDIETLLKNADIAMYFSKRMGPNM-FSFYEQSMNADALKRMTIE 361 Query: 493 NTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R AL +G+ L+ QP + E G + +L ++ G + P +F+ + + + Sbjct: 362 NHLRQALGRGEFALHYQPQFDLVTGEVCGAEALLRWHNWELGNVPPIEFISIAEENGMIV 421 Query: 550 RFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 V+ + + T R +VN+ + + + + + PQ + Sbjct: 422 AIGEWVMRTACRQTRTWLDQGLPLQRIAVNVSVNQFTHTDFLNMVKSILEETTLDPQYLE 481 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 +EITE N + + L K RIAIDDFGTGY++ RLK + D +KID FV Sbjct: 482 IEITESLLVKNVPETTNILHALKKMNIRIAIDDFGTGYSSMSRLKEIPIDCLKIDKTFVD 541 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 I D I+ +I +A+ +L ++AE VET Q L Q +QGYL +P Sbjct: 542 GIAIGKRDQSIITAIIAMAEGMNLRLIAEGVETTGQVDFLRVKQCQEVQGYLFSKPLS 599 >UniRef50_Q2RTE0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTE0_RHORT Length = 886 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 110/598 (18%), Positives = 209/598 (34%), Gaps = 39/598 (6%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 L+ + + + Y + ++ A I + Sbjct: 283 LRGHGEAPSPALSRALEA-----LGPRLGEAIVYERGQSLMRLQSAAIAAAANAIVITDG 337 Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS 270 E R ++ L + YE D I G L V P W Sbjct: 338 EGRVEWVNE-------AYHLLSGYERDQIIGTLPAVL------AGPSAANPTAIEAWPTL 384 Query: 271 TLC-LLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + Y + + ++ L+ + + R + Sbjct: 385 RAGQVWRGEIHETHRDGRTYIVDKTITPIVDASGRLSHLVAVDEDVTARKKAEERIRYLS 444 Query: 327 LTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN G + + +D ++ G H + + Sbjct: 445 NYDTLTRLPNRVLFRDRLYQAVVQARRGHGGLAVMFIDLDQFSLVNDTLGHAAGDHLLMT 504 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDM 435 I + +E + + ++ G E L+ + + + L + + + Sbjct: 505 IASRINAAAEEADTVARVGGDEFALIQTALTSADSAASLARRLIDVIRTPVDLGGREVVI 564 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G + + L+ ++ + ++ + ++ L + Sbjct: 565 GANVGIAIYPQDGTDPDNLMKNADMAMYRAVKSG-DDSCCFFSNEMNAEAAVRLSLEEDL 623 Query: 496 RTALDQ-GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 R ALD L L+ Q + G + + G + P +F+P+ L Sbjct: 624 RRALDSGDQLFLHYQLQFCIESGRPVGAEALARWTHPTLGAIPPTRFIPVAEDSGLILAL 683 Query: 552 DLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + L A G +VN+ + QK + R+ L ++ + P+ + LE Sbjct: 684 GDWVLGTALAEYARWRAAGCGRLTIAVNMSAVQFRQKGLVERVTDLLAQHGVPPEDLELE 743 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE +A+ ++ + L + G R++IDDFGTGY++ LK + D +K+D FV+D+ Sbjct: 744 LTESMLMQDADQAVAQLTALSQAGIRLSIDDFGTGYSSLGYLKLFRVDKLKVDQSFVRDV 803 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + DA+I R+I +L + L V+AE VET +Q A L + G +QGYL+ P+P Sbjct: 804 TEDGNDAVIARAIINLGHSLGLEVIAEGVETPEQMAYLRREGCDVVQGYLMAYPEPGE 861 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 100/451 (22%), Positives = 175/451 (38%), Gaps = 16/451 (3%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------- 346 + + + + + + A DPLT LPN L Sbjct: 350 TVRDDEGEVSNYVAVFSDISQIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARR 409 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ G ++ I L ++ + + G E +VL Sbjct: 410 AGTSVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVL 469 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + L + R + + G + F + + L+ Sbjct: 470 EDVVRGEAVSEVAEHLIAEIARPLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAM 529 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GY 519 +S A E ++ +++ L + +R AL+QG L+ QP + G Sbjct: 530 YRSKALGRN-TFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGA 588 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + +L + G+++P +F+PL + L L VLE + P R +VN Sbjct: 589 EALLRWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVN 648 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + + + R+ + P A+ +EITE +AE++ + L G +A Sbjct: 649 VAAPQIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVA 708 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LK L +KID FV+D+ + + I R+I + ++ VVAE Sbjct: 709 IDDFGTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEG 768 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VE Q A L G QGYL +P P A+ Sbjct: 769 VEEPAQAAFLVSEGCTLAQGYLFAKPMPGAE 799 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 97/425 (22%), Positives = 179/425 (42%), Gaps = 17/425 (4%) Query: 319 NRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLM 370 +A D LT LPN + + +A + + +D+ + ++ G Sbjct: 432 AEELRHRAFHDHLTSLPNRMHSSTQLDLMISHTIKHQATAALLFIDLDHFKEINDTLGHS 491 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH 427 +R + + L ++E + + +L G E ++ ET + + L + R Sbjct: 492 TGDELLRKVSQRLRRSVREEDIVARLGGDEFTVITGVLETRSDAESIAQKLLNELIRPYL 551 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + L + F + + + LL ++ + ++ + ++ Sbjct: 552 IDGNELSVTASIGVSFFPEDGDNSEILLRNADSAMYEAKRNGRN-GYRLYTSAMTEEISE 610 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L +R A+ + +L LY QP + G + +L G++ PD+F+P+ Sbjct: 611 RFALTEELREAISREELELYFQPQVDIRTGSILGAEALLRWNHPQRGMIPPDRFIPIAES 670 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 + VLE + +A P+ +VN+ + ++ + +I L Sbjct: 671 SGQMIKIGAWVLEQVCAKVAGWKERGIVAPKIAVNISNQQMNRE-LVEQITELLASSKCD 729 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + LEITE N E + + L G IAIDDFGTGY++ LK+L + +K+D Sbjct: 730 PACLELEITESCLMENPEQMAHELSSLKALGVGIAIDDFGTGYSSLSYLKQLPINKLKVD 789 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV D+ + D I R+I + ++ +L+V+AE +ETQ+Q LL KL QGY + Sbjct: 790 RSFVSDLQDDENDLAITRAIVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSK 849 Query: 724 PQPLA 728 P P Sbjct: 850 PLPEE 854 >UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Nostocaceae RepID=B2JAQ5_NOSP7 Length = 1043 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 113/561 (20%), Positives = 205/561 (36%), Gaps = 27/561 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 I A+ + G + W + L P GY V FF Sbjct: 467 ITDRKLAEAALQESKQRLDGILCSLEDVIWSISADTFETLYLNPAALKVY-GYSVSEFFE 525 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLL----NYNQNFLQGVETEYSLAFILAVLISFSVC- 304 L + A L ++ L ++ + S Sbjct: 526 NSNLWFEVIHPEDQQQVHAAIQPLFLTEKQELEYRIVRPDGQVRWLLNRSHLIYNASGLP 585 Query: 305 --LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFC 353 + + + L + A D LT LPN EQ + Sbjct: 586 IRIDGIATDITERKLLEEKLVHNAFYDALTGLPNRILFIDRLEQAIAQMKHNPDDLFAVL 645 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G ++ + ++ + L +Q ++ + +L G E ++LS +T Sbjct: 646 FLDLDRFKVVNDSLGHLVGDQLLVTLAQRLQQCLQPDDTVARLGGDEFTILLSHIQTIED 705 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + ++ + + M LL ++ Sbjct: 706 ATDIAKHIHQALKPPFNLCGYEVFMTASIGIALGTNKYVQPADLLRDADTALYRAKEQSQ 765 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + + + + + L +R A+++ +L ++ QPI + G++ ++ Sbjct: 766 AGHI-VFDTTMYDRAVELLQLETDLRWAVERQELCIFYQPIICIKTGKITGFEALVRWQH 824 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTL 584 + G+++P +F+P+ + L VL K L +VNL Sbjct: 825 PERGLISPTEFIPVAEETGLIIPIGQWVLTESCKQLRQWQLQFPAIKPLTLNVNLSGKQF 884 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q ++ +I ++ + +S + LEITE ++ + + ++QL FG ++ IDDFGT Sbjct: 885 SQPHLIEQISQILQDTGLSSSNLKLEITETAIIASPQKATSILKQLKAFGLQLCIDDFGT 944 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L D++KID FV I ++T IVR+I LA +SVVAE VET Q Sbjct: 945 GYSSLAYLHNFPIDVLKIDRSFVNRIDSDTEQFAIVRAIVTLADNLGMSVVAEGVETINQ 1004 Query: 705 QALLHKLGVQYLQGYLIGRPQ 725 A L L Q QGYL +P Sbjct: 1005 LAQLQLLQCQQAQGYLFSKPL 1025 >UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B330_9CHRO Length = 1188 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 105/570 (18%), Positives = 198/570 (34%), Gaps = 29/570 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 R I + + W + + L L+ P + Sbjct: 610 SLRDITERKQIEKALSESEQRLESILNSIEDVVWSTSATTLNLIYLNPATERVYGCSIEQ 669 Query: 246 VFFIIFTLGVGKLRYPFLNLT-----WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + L +P A+ Y ++ T L + Sbjct: 670 LLAEGNLW--FNLVHPDDQALIDAHFKALEDTGHSEYEYRIVRPDGTVRWLYSRSRTIYD 727 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEA 348 + + + + A DPLT LPN L + + Sbjct: 728 PTGKPIRFEGIDSDITERKSFTEQLQYNAYHDPLTSLPNRIFLLEKLEEALKKNQNRENI 787 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D+ + ++ G ++ + +I + L + L + G E ++L Sbjct: 788 FFAVLFLDLDDFKVVNDSLGHIVGDQLLIAIAQRLKTSLSVPHTLARFGGDEFTILLEEI 847 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 ++ + ++ N + + D + Q +L Q+ Sbjct: 848 QSTDEPLKAAQKIHNDLTQPYDLNGQQVFISTSIGIALSDPSYIHPQEILRDADTAMYQA 907 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEI 522 ++ + + K++ L +R A++ + LLY QPI + G++ + Sbjct: 908 KRWGKG-GYAVFDQQMHLRAVKRLHLEIELRQAIELKEFLLYYQPIVSLSTGYLTGFEAL 966 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KKGPRFSVNL 579 + G+++P +F+P+ + L + + + L K + SVNL Sbjct: 967 IRWQHPKKGLISPVEFIPIAEETGLIVPMGKWITQQACRQLKLWQEQYNLKNPLQISVNL 1026 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L ++ I + + I P ++ LEITE N + +M + +L K + + Sbjct: 1027 SSKQLRNSHLIEEIDEILAQTGIDPSSLKLEITESMLMENVDIAMNILIELRKRNIELCL 1086 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L R +KID FV + +A IV +I LA + ++V AE V Sbjct: 1087 DDFGTGYSSLSYLHRFPVTTVKIDRSFVMQMQPGNSNAEIVHAIITLAHSLEMTVTAEGV 1146 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ETQ Q L L + QGY +P P + Sbjct: 1147 ETQLQLQQLQWLECEQAQGYFFSKPLPPKE 1176 >UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q7Q8_SULNB Length = 656 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 120/628 (19%), Positives = 238/628 (37%), Gaps = 32/628 (5%) Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 L+ +++ +K TFF + + L ++ Sbjct: 25 FSLLNSAIAVILIFISFLTISMIVKEETFFASF-----LCVYIFLSIGLVYLLRKSKDNY 79 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 ++++ L A S+ + +L + L +V + Sbjct: 80 QIVIPVFTIISLILLLTAISIFPNEHERVAWFLVIIIFSFFLGGRQLGVAMTLMSIVGII 139 Query: 248 FI--IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV-----LIS 300 I +G+ + + + ++ + Y + + Y L L + + Sbjct: 140 SIDYFVDMGLSFYSLMLIIVIILIGSVLVDLYEKRDKTAKKRLYKLNNSLELRIKEEIEK 199 Query: 301 FSVCLLYMVRIYHRS----EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + S + + A D LT LPN Sbjct: 200 RILIYEKSNLDLKESSKKLKQQKDAYKKLAYYDILTKLPNRVLFYDRLKHSIDKSKRNNT 259 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +DN + ++ G + + ++ + L +++++ L +L G E L+L Sbjct: 260 KLAVLFLDLDNFKEINDSLGHHVGDNVLKILATRLQKRLRKSDTLARLGGDEFTLLLEDL 319 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E + + L S+ I L + + + + + LL + Sbjct: 320 EDLSNIGEISQSLIQVISKPIKIKEHTLYVTVSLGISIYPDDGQDTESLLKCADAAMYSA 379 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEI 522 L ++ ++ + +++ +IR ALD + ++Y QP+ + G + + Sbjct: 380 KNEGCNL-FHFYKQEMTVKALERITFETSIRHALDNDEFIVYYQPLIDIRTNQLIGLEAL 438 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMP 581 L + G+++PDKF+ + ++ + +VLE + L P R +VNL Sbjct: 439 LRWQHSEKGLLSPDKFIHIAETSSIIIQIGERVLEDVAAQLEIWHEKGFNPERIAVNLSV 498 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + I + ++ P+ + LEITE ++ + Q+ G + IDD Sbjct: 499 KQLRHHGLISIISDILEKTKFRPKWLELEITESYTMQKPVQAIRLLNQIKDLGVDLTIDD 558 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK++ + +KID F+KDI N D +V +I +AK+ +L VVAE VET Sbjct: 559 FGTGYSSLSYLKKIPVNKLKIDRAFIKDITENKDDKALVSAILSMAKSMNLDVVAEGVET 618 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q+ L LG +QGYL +P ++D Sbjct: 619 EEQRQCLEALGCYKIQGYLFSKPMSVSD 646 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 96/471 (20%), Positives = 185/471 (39%), Gaps = 27/471 (5%) Query: 278 NQNFLQGVETEYSLAFILA--VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + ++ R + H D LT LP Sbjct: 101 EMRLRHADGSWIFCEVTATNHLFDKKIKGIIVNYRDITERKLYEEEIHQLVYHDNLTGLP 160 Query: 336 NFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L+ E E + + +D + ++ G + ++ + + L+ ++ Sbjct: 161 NQYMLDSFLESEIYKAKYECTRLALLIIDLDRFKVINDSIGHTIGDQLLKEVGKRLVSIV 220 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFD 445 +++ L + G E ++VL + + L+ + NI+N + + + F Sbjct: 221 SKSDLLVRKGGDEFVIVLPSIKKDQVLKVVDNIINLLTSPFKIKSYDIFTSPSIGVSIFP 280 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE-----MVSGQTTKQVLLLNTIRTALD 500 + +T L + Q+ ++ T + +R A++ Sbjct: 281 EDGKTKDLLYKHAEFAMYQAKKSG-NGQYHFFSSAEFNGDMNPYT-----IEVELRKAIE 334 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 Q L+ QP N E G + ++ G+++P F+P+ L VLE Sbjct: 335 QKQFTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSGLIVPIGNWVLE 394 Query: 558 SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 K SVNL P N+A I + P + +EITE Sbjct: 395 EACKQNKIWQVSGMSCVVSVNLSPKQFAHTNLASVIKNTLFNTGLDPHLLEIEITESMT- 453 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 ++ ++ +E++ K G +++IDDFGTG+++ LK+ + +KID FV ++ N + Sbjct: 454 ADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSFVSELHNNPDEE 513 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV++I +A+ +L+VVAE +ET++Q A L + QG+L +P P + Sbjct: 514 TIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLPPS 564 >UniRef50_A1K633 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K633_AZOSB Length = 790 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 105/447 (23%), Positives = 183/447 (40%), Gaps = 23/447 (5%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 + + A DPLT LPN R L Sbjct: 332 RDGATLWHGHCHDVSSYKAAEDEIRHLAFYDPLTGLPNRRLLMDRLRHALATHARSRHHG 391 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE- 409 + + +DN + ++ G +R + L ++E + + +L G E +++L + Sbjct: 392 ALLFIDLDNFKTLNDTQGHQYGDMLLRQVAARLSACVREADTVARLGGDEFVVMLEDLDR 451 Query: 410 --------TEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 E + ++ LN + FD + LL + Sbjct: 452 DKGAAARQAESAGEKILAALNDA-YQLDGREAHSTPSIGITLFDAADAEIAELLKRADLA 510 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKEGEGY 519 Q+ L + ++ L + +R +L QG+ L QP R+ G Sbjct: 511 MYQAKEAGRN-TLRFFDPVMQATVDAHSALESELRRSLRQGNFALLFQPQLDRDGRMTGA 569 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSV 577 + ++ + G+++P F+PL + L VLE+ LA + +V Sbjct: 570 EALVRWHHPEQGLVSPAAFIPLAERTGLILPLGRWVLENACDKLAEWAADPETAHLTLAV 629 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ ++ R+ +R ++P + LE+TE + E ++ +++L + G Sbjct: 630 NVSVREFRHPGFCDQVERVLQRTGVAPGRLKLELTESLLLEDVEDAIERMDRLKRLGVGF 689 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ LKRL D +KID FV+D++T+ DA+I R+I L ++ L V+AE Sbjct: 690 SLDDFGTGYSSLAYLKRLPLDQLKIDRSFVRDVMTDPNDAIIARTIIALGQSLGLDVLAE 749 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRP 724 VET +Q L + G Q QGYL GRP Sbjct: 750 GVETAEQHDFLLRHGCQSFQGYLFGRP 776 >UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=Bradyrhizobiaceae RepID=Q20XI9_RHOPB Length = 915 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 94/460 (20%), Positives = 172/460 (37%), Gaps = 21/460 (4%) Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + +A A + R A D LT LPN + Sbjct: 439 VTPDGRSIQIATEPAP----EGGWVATHEDITDRRRSEERIAYLAHYDELTSLPNRTSFR 494 Query: 342 QAPE-------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + E + + + ID + ++ G + ++ + L ++E + + Sbjct: 495 ERIEDEFERVARGGTLALLYIDIDEFKAINDSLGHPVGDALLKIVAARLKACLRETDFVA 554 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E ++ + P + +V L + + Sbjct: 555 RLGGDEFAILQTAPRDVQEVTELVARLFETIRAPCECLGHQISTDASIGIALAPPHGTDT 614 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ Q+ A E + ++ L +R A+ +Y QPI Sbjct: 615 DQLIKNADLAMYQAKADGRRTC-RFFEPRMEASAKERRTLELELRKAIADCAFEIYYQPI 673 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 N + G + +L G+++P KF+P+ L VL + A P Sbjct: 674 VELRNGDVIGCEALLRWRHPQRGMISPAKFIPVAEATGLINELGEWVLRTACAEAANWPA 733 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + +VN+ P+ + + ++ + + LEITE + E+++ + Sbjct: 734 E---MSVAVNVSPVQFKSRTLPLKVAAALAASGLPASRLELEITEAVLIDDDETALSVLH 790 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +L G RIA+DDFGTGY++ L+R D IKID F+ I + IV+++ ++A Sbjct: 791 ELKTLGVRIALDDFGTGYSSLSYLQRFPFDKIKIDRCFIDGIARPDGASAIVQAVVNIAT 850 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A+ ++ AE VET +Q+ LL LG ++QGYL Sbjct: 851 ARHMTTTAEGVETAEQRDLLRGLGCTHMQGYLFSPAIAPD 890 >UniRef50_C4XGB8 Putative response regulator receiver protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGB8_DESMR Length = 801 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 111/541 (20%), Positives = 201/541 (37%), Gaps = 34/541 (6%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 L + C D + + G+ + P + L+ Sbjct: 255 IDLGLSAEGFCVIDAEDRLRFLNASAARMFGLPGLPEPGTPLSDALPQELAASLVRDASR 314 Query: 281 FLQGVE--------------TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + E ++ L +V + L + A Sbjct: 315 VIAWNEPVKKETTFAIGGQDKTLLVSLFPMGLDESRRLAGGIVTDITDRKQLESQLAHMA 374 Query: 327 LTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 DPLT LPN Q + L +D + ++ G + + Sbjct: 375 FHDPLTGLPNRSLCLDRIRQALERSKRRDNYQYAVIFLDLDRFKIVNDSLGHHVGDRLLE 434 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 S+ R L ++ + + +L G E ++VL + + ++ + S + + Sbjct: 435 SVARRLRDCVRSLDTVARLGGDEFVVVLEETGSYREVVRIIKRIRDAMSEVFPLSGHDVH 494 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + E + LL + ++ + + + L + Sbjct: 495 VSASMGIVVSPAIYEKPEELLRNANIALHRAKDEGRNR-FKVFNTRMLEDAIRLMDLESD 553 Query: 495 IRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL +G+ L QPI R++ G++ ++ + GI P +F+P+ L Sbjct: 554 LRAALKRGEFYLDYQPILALRDRRVTGFEALVRWRRPGKGIAPPGEFIPVCEDTGLIVPL 613 Query: 552 DLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 L VL + +A+ G SVNL L Q ++ + R+ + + P+A+ Sbjct: 614 GLWVLTEACRTMASWQARFPETAGMSMSVNLSAKQLSQPSLVEDVERILRDTGMDPRALK 673 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE N E S+ +++L G R+++DDFGTGY++ L+R D +K+D FV Sbjct: 674 LEITETVIMDNPEVSILRLKRLKALGVRLSVDDFGTGYSSLSYLQRFPIDTLKVDRAFVS 733 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D+ T + + IV ++ LA + L VVAE VE + Q +L + QG+L RP Sbjct: 734 DLDT-SENRKIVGAVVALAHSLGLDVVAEGVELETQSDVLTGFACEAGQGFLFSRPVCKE 792 Query: 729 D 729 D Sbjct: 793 D 793 >UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor, putative n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CE49_ACAM1 Length = 880 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 94/451 (20%), Positives = 175/451 (38%), Gaps = 20/451 (4%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 L + + + + +A D +T LPN + Sbjct: 407 LALRNDQNQAFRIAGSQTDVTAYYSTRAQLEFKAQHDEMTQLPNRVLFMERLTHAFRMAK 466 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 +Q + L +D + ++ G + + + + L +++ + + + G E + Sbjct: 467 HQQSRLFAVLFLDLDRFKIINDSLGHRVGDQLLIEVSKRLQQCLRKQDTIARFGGDEFAI 526 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L E H+ + +I + + + + LL Sbjct: 527 LLDTVEDADEAIHVAQRILQALKAKISLEEHEVYTSASIGITVSSPDYQAPEELLQDSDT 586 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GE 517 ++ + + Q Q+ L ++ A+ +L L QPI + Sbjct: 587 AMYRAKKQGKN-CFEVFSSGMRAQVNSQLQLETDLQRAISNNELHLVYQPIVDLNTENIV 645 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PR 574 G++ +L + G++ P +F+P+ L D VL + +A G Sbjct: 646 GFEALLRWNHPERGLVPPSEFIPVAEDAGLMVSIDWWVLTEACQQMAHWLNIYPGSTELT 705 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ LQ ++ + + + P + LEITE SNA + + L K G Sbjct: 706 INVNISAHQFLQSTFCEKVNAIIQETGMKPHHLKLEITEGVILSNAPNISEQLNNLKKLG 765 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +AIDDFGTGY++ L D++K+D FV + + IVR+I +L + ++ V Sbjct: 766 IHLAIDDFGTGYSSLSYLYAFPLDVLKVDYSFVSRMDQD-NGLAIVRTIVNLGQNLNMKV 824 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 VAE VET+ QQ L ++G ++ QGYL RP Sbjct: 825 VAEGVETKIQQEYLQEMGCEFAQGYLFSRPL 855 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 93/467 (19%), Positives = 175/467 (37%), Gaps = 24/467 (5%) Query: 283 QGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + EY + V+ + + + + + QA D LT LPN + Sbjct: 456 RKNGEEYIKLLTINVIRDDDGAIYRHVALFTDITERKKVEELIWRQANYDSLTKLPNRQM 515 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 EQ + + +D + ++ G + R + ++E++ Sbjct: 516 FHDRLEQEAKKAHRAGLSMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESD 575 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +++LS E + + + + + + + + Sbjct: 576 TVARLGGDEFIVILSELEDMASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYPNDA 635 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L L + + + + ++ L N +R A+ G +Y Sbjct: 636 TELDVLFKHADQAMYVAKYAGRNR-FNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVYY 694 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + + + ++ G+++P +F+PL + L V ++ + Sbjct: 695 QPIVEMSSGQIYKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQ 754 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRII--RLFKRYHISPQAVILEITEEQAFSNAES 622 + + SVN P+ A + ++ H+S ++I+EITE Sbjct: 755 WRRKFHRSFQISVNKSPVQFRH---AESLSWPEYLEQQHVSGDSIIVEITEGLLLDAEVE 811 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + G ++AIDDFGTGY++ LK D +KID FV+++ T D + + Sbjct: 812 VNKKLLRFRDAGIQVAIDDFGTGYSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEA 871 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +A V+AE VET Q LL G Y QGYL RP P + Sbjct: 872 IIVMAHKLGFKVIAEGVETSTQHELLAAAGCDYGQGYLYSRPLPPEE 918 >UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KFD6_9GAMM Length = 643 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 99/452 (21%), Positives = 180/452 (39%), Gaps = 23/452 (5%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWH-------LQALTDPLTLLPNFRALEQAPEQE----- 347 ++ + R + A D LT LPN L Sbjct: 184 GNVRGVVGIARDITDQKKTEETLRFQQRSLEHLAHHDALTGLPNRLYLIDKLNHALLSPD 243 Query: 348 ---AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 A + L +D+ + ++ G + +R++ R L +++ + + +L G E +V Sbjct: 244 LNTASLAVLFLDLDHFKDINDSLGHSLGDEVLRAVSRRLSACVRKADVIARLGGDEFTIV 303 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L G + + + + ++ L++ G+ T + LL Sbjct: 304 LQGIGSSIIAVEVAQKILKVFQEPLTLSDRTLNVSTSIGISVSPGDGVTTEELLRNADAA 363 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 ++ + ++ + ++ + + + TAL +G+ + QP + E G Sbjct: 364 MYRAKRSGRNTFMH-YSPDMTERALARLSMESDMHTALARGEFHVAYQPQVDMRSGELMG 422 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + ++ G + P++F+P+ + L VLE + R++V Sbjct: 423 VEALMRWEHSTRGNIPPEEFIPIAEENGLILAMGSWVLEEVCAEQKRLKNAGLSDIRYAV 482 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ LL + + S + LEITE E + ++ + G I Sbjct: 483 NVSGRQLLNPEFLALVEHIVSTKDCSGSQLELEITESVLLHEPELAAKAMQSFREMGIAI 542 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTGY++ LK+ + +KID FV+DIV + D I ++I L A L V+AE Sbjct: 543 AIDDFGTGYSSLAYLKQYPLNRLKIDASFVRDIVVDPDDRAIAQTIIALGNALDLEVIAE 602 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET++Q+A+L G QGYL +P AD Sbjct: 603 GVETEEQRAMLVSDGCSLGQGYLFSKPISPAD 634 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 93/443 (20%), Positives = 179/443 (40%), Gaps = 19/443 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCC 354 L +R +++ + A DPLT L N L + + + Sbjct: 251 AYLISLRDITDRKYITDQLQYHATHDPLTDLFNRNFLLEKLQNLLEKNKNQSGKSFAILF 310 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D+ + ++ G + + I + L + +N L + G E ++L + Sbjct: 311 LDLDDFKVVNDSLGHLAGDQLLIMITKRLQNSLGQNHTLARFGGDEFTILLENIKETQDA 370 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 ++S + N + + + +L QS Sbjct: 371 IIAAQKIHSNLTYPYNLNGQQIFINTSIGIALSSPDYTHPYEILRDADIAMYQSKKQGKG 430 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + + Q K++ + +R A++Q + + + QPI + + G++ ++ Sbjct: 431 ACT-LFNQQMHEQAVKRLQMEIELRQAIEQQEFIAHYQPIFSLTTGKLIGFEALIRWQHS 489 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLL 585 G+++P +F+P+ + L +L L + SVNL L Sbjct: 490 QKGLISPAEFIPIAEETGLIVPMGKWILLEACTQLKQWQEQYDHEHILQISVNLSSKQLR 549 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + I ++ I+PQ + +EITE N +++M + QL + ++ +DDFGTG Sbjct: 550 DPYLVQEIDKILTHTEINPQNLKIEITESLLMENFDTAMNILLQLQERNTQLCLDDFGTG 609 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L R DI+KID FV + + + I+R+I LA + ++ V+AE +ET+ Q Sbjct: 610 YSSLSYLHRFPVDILKIDRSFVMQMHSGNNNLEIIRTIITLAHSLNMRVIAEGIETESQL 669 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 + L L + QGYL +P P Sbjct: 670 SQLKSLNCEQGQGYLFSKPVPQE 692 >UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C8S6_CROWT Length = 906 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 176/443 (39%), Gaps = 16/443 (3%) Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSF 352 + + + + ++ + QA D LT LPN + EQ + Sbjct: 458 GVTSAVVNIHDITQIKESEQKLYYQAHHDTLTNLPNRMLMNTRLEQSIQQATRKGDKLAV 517 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D + ++ G + + + L ++++ + ++ G E +++L + Sbjct: 518 VFIDLDRFKNINDSLGHRAGDSLLEQLAQRLCQQRRKSDTVARISGDEFVVILEDIKDTQ 577 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 +V L + M F + + LL ++ Sbjct: 578 HAGMVVGKLMRTFEEPFIIEGRTIKMTSSMGLSLFPDDGTDVATLLRNADAAMYRAKEDG 637 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 + ++ + +LL N +R AL + + L QP + G + +L Sbjct: 638 RN-TYCFYRKEMTSTVFEYMLLENALREALKKKEFYLLYQPQIEMLSHRCLGIEALLRWH 696 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLL 585 + G+++P +F+P+ Q L VL + + K R +VN+ + Sbjct: 697 HPELGVVSPAQFIPIAEQSGLIQEIGTWVLTTACRQAKIWLEQKLDFGRIAVNVAAPQIQ 756 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + + + K + + LE+TE E ++ +E+L G ++ IDDFG G Sbjct: 757 HGDFIQVVENVLKTTGLPAAYLELELTEGLLMKQTEQNIKQLEKLQGMGIKLTIDDFGIG 816 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL D +KID F++D+ +T D I +++ L A +L ++AE VE ++Q Sbjct: 817 YSSLNYLKRLPIDKLKIDQSFIRDLPHDTNDTAISQAVIALGYALNLQIIAEGVENEEQA 876 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 A L + G QGY +P P Sbjct: 877 AFLKEKGCHQAQGYFFSQPIPPQ 899 >UniRef50_A1U2T3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Marinobacter RepID=A1U2T3_MARAV Length = 725 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 100/440 (22%), Positives = 174/440 (39%), Gaps = 16/440 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 + R + + QA D LT LPN + + + L Sbjct: 271 YYGIARDVTERKEAEAFINFQAYHDLLTRLPNRALFKDRLELAITHARRSQQKLAVMFLD 330 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G M ++++ L ++ + L + G E L+L ++ Sbjct: 331 LDRFKVVNDTLGHAMGDRLLQAVTHRLEKCLRRGDTLSRFGGDEFTLLLPSIHGHDDARN 390 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L + + +G F ET+ L+ A Sbjct: 391 IARKLIHALKAPFQLGDHEVFVGVSIGISVFPEAGETMDLLIQNADIAMYHVKARGKD-G 449 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + +S T ++ L +R AL++ +L ++ QP + G + ++ + Sbjct: 450 YRFYSDSMSINTANRLSLERDLRLALERNELRVFYQPQVCSRSNRVVGLEALVRWQHPER 509 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNI 589 G++ P FLPL + L + QV++ + + R +VNL P + Sbjct: 510 GLLYPGDFLPLAEETRLVGKLSEQVIDQACRDVGRWISSGHSDLRLAVNLSPSQVEHPRF 569 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ ++ + +EITE ++ E +++L G RIAIDDFGTGY++ Sbjct: 570 VETLMNRVAAHNFPADNLEIEITENVIMNDLEQISRKLKELAATGVRIAIDDFGTGYSSL 629 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L RL +K+D FVK I + A IV +I +A L +VAE VET Q A L Sbjct: 630 NYLHRLPIHTLKVDQSFVKAIRSGEDGACIVNAIIAMAHGLKLEIVAEGVETDDQLAYLK 689 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 LG +QG+ G +P AD Sbjct: 690 SLGCHQVQGFFYGPARPAAD 709 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 100/464 (21%), Positives = 174/464 (37%), Gaps = 20/464 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + L ++ + V+ + +R A D LT LPN Sbjct: 332 HADGSTFPCLVSLMRVLDTEGLPFHYVGFVKDLSETVEARQRIEQLAFNDALTGLPNRLR 391 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + + + ID + ++ G + + + + + ++ + Sbjct: 392 LTERLEFSIELARRENTRFAVLFIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVD 451 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +L+L E+ G + + L ++ + + + + Sbjct: 452 TIARLGGDEFVLLLHRVESHG-AELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDG 510 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ETL L+ H + ++ ++V + + +R AL QG L Sbjct: 511 ETLDDLIKNADSAMYHVKEHGRGDC-CFYQRQMNVGLLERVRIDHAMREALQQGHFWLAY 569 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ D G + P +F+P+ + VL ++ A Sbjct: 570 QPQIDLVSGLVIGAEALVRWNDPDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAH 629 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 SVN+ Q N + + + P + LE+TE N E ++ Sbjct: 630 WQAQGIRLSLSVNVSATQFHQANFIDLLAQWLDETGLPPGRLELELTESILIQNVEETLR 689 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +E L G R+AIDDFGTGY++ LKR +KID FV DI + D I ++ Sbjct: 690 RLENLVALGVRLAIDDFGTGYSSLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIG 749 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ-PLA 728 LA L V+AE VET Q+ L G QGYL P A Sbjct: 750 LASVLKLRVIAEGVETDIQRQFLLDAGCHEFQGYLCAPALEPAA 793 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 87/451 (19%), Positives = 179/451 (39%), Gaps = 24/451 (5%) Query: 300 SFSVCLLYMVRIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQAPEQEAG--- 349 + ++ ++ + QA D LT LPN EQ Sbjct: 238 GETTEVVSLIHDITEQKKAEAVLQEQKNILRYQAHHDALTRLPNRVLFFDRLEQSIRKTA 297 Query: 350 -----KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +D + ++ G + +R + + +++ + L +L G E ++ Sbjct: 298 RSEKDFALFFIDLDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVI 357 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + + + + ++ + L + + + + LL Sbjct: 358 MEDLGHPEDASVLAEKILLVLQKPMYIDEYTLYISGSIGISLYPQDAMDTESLLKYADTA 417 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEG 518 ++ + + ++ +++ + +++ A+++ +L ++ QP + G Sbjct: 418 MYKAKENGRN-TFEFYAPEMTEYALERIAMKTSLKEAIEKEELCVHYQPQIDARAECIIG 476 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + ++ G++ P+ F+ L L D V+ + +K ++T + ++ Sbjct: 477 VEALVRWQHPTRGLLHPEAFISLAEDTGLIVDIDKWVMRTAMKQVSTWHQEGLVSDVLAL 536 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L N I + P+ + LEI E Q N ++ +++L G I Sbjct: 537 NISIKQLEGHNFMEEIAACLDDFDFKPKWLELEIPEGQVMKNHTETIERLKELSVMGIGI 596 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFGTGY++ LKRL + +KID F++ I N D IV++I LA + L V+AE Sbjct: 597 SIDDFGTGYSSLSLLKRLPINRLKIDKSFIEFIP-NEEDVAIVKAIIALANSLKLDVIAE 655 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q+ L + G +QGY RP Sbjct: 656 GVETDDQKDFLVENGCTKIQGYYYSRPIASE 686 >UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLU9_AZOVD Length = 834 Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 127/803 (15%), Positives = 262/803 (32%), Gaps = 86/803 (10%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCG 70 + ++ L L + F++ ++ ++ I ++ + V + G R ++ V C Sbjct: 21 LAVWGLICLFGGSLPPVKYFLTLHQMVETASIVVSVLIFAVGWHTFRMHGNRVILMVSCT 80 Query: 71 MFCTNLWNFHLSFLQTA---VMLGSQTFVVLCACAILRWQLGT--------RWRYGLTSR 119 + +F + + + + + R WR ++ R Sbjct: 81 FLGVAISDFSHMLSYSGMPDFLGPNSPEKAIGFWLLARCLTALGVLIIACLPWRLEVSGR 140 Query: 120 YVWQ-----RLFWLGLVTPIGIKCSMYLVGSFFD---------------FPLKISTFFGD 159 R+ + L + I + L I Sbjct: 141 SAAIDPDRWRVLLVTLCAMVSIHLVLLLFPEILPRTYQEGVGLTEFKRGVEFSIIAIHAA 200 Query: 160 ADAIFTVVDLL------SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR 213 + + +V L L+ M+ + + A ++ + Sbjct: 201 SIVLLSVRRRRDMGLEKGLLICSLLVMMMGEFFFTIYSDVTDAYNIFGHIYKI-IAYLVL 259 Query: 214 AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN--------- 264 + + L+ L + + + G L + G+ + + Sbjct: 260 YRAIFVESILAPYKFLEDSRQHVEVLMGALPDIILEARLDGLLLSAHVPTDGKLFGEKKP 319 Query: 265 -----------------LTWAVSTLCLLNYNQNFLQGVETEYSL------AFILAVLISF 301 LT A+ A +LA Sbjct: 320 KAGDYLQDRLPSQAMDCLTGAMRAAESGGQGTGLRFRTGKGAEELVFDVSASLLAQRSDR 379 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFC 353 S + ++R + A D LT LPN + +Q + Sbjct: 380 SSHFVILIRDVTEQARNQSKIEQMAHFDALTGLPNRTLFNTCFDVEATRCEKQRQPLALI 439 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS--GPETE 411 + +DN + ++ G + + + L +++ + + + G E + +L T Sbjct: 440 FMDLDNFKNVNDSLGHKVGDALLVELAARLEKVLRPRDMVSRQGGDEFMFLLPEADVRTA 499 Query: 412 GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 ++ + I L + F + L+ L ++ Sbjct: 500 EQMTECIKRSVEVPIQVGQYTLHVSASMGICMFPQDGRDLETLSSHADIAMYRAKQERRS 559 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 E + + +LL +R A+ G L +Y QP + ++ EG + ++ Sbjct: 560 H-YAFFSEEMQACAARSLLLEGALREAVQWGQLDVYYQPQFDITGRKLEGAEALVRWRHP 618 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLLQ 586 + G ++P +F+P+ + VL + + +VN+ Sbjct: 619 ELGFISPAEFIPIAEITGQIIKIGDLVLRRATQQMRHWLDAGLPGDMSIAVNISMAQFRD 678 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + +I + P A+ LE+TE A + E + + L G +++IDDFGTGY Sbjct: 679 TALLEKIDTALAESQLPPWALELELTESVAMDDPEQVVDIVRSLRSRGVKLSIDDFGTGY 738 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+L+ +KID F++ I + D IV++I LAK + +AE +ET++Q+ Sbjct: 739 SSLSYLKKLRVHKLKIDRSFIQAISSAGSDRSIVQAIIGLAKDLDMQTIAEGIETEEQRQ 798 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 LL LG QGYL +P P ++ Sbjct: 799 LLEALGCDSGQGYLFCKPLPASE 821 >UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88HN4_PSEPK Length = 733 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 101/452 (22%), Positives = 181/452 (40%), Gaps = 16/452 (3%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 +A + ++ V + + R + + R+ + A D LT L N +LE Sbjct: 273 DIANLPIMVNGEIVGVFGIARDISKQKHYERQLSINASHDGLTGLLNRLSLEDRLVQACR 332 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 +++ + + +D + ++ G + + + L ++ + + ++ G E Sbjct: 333 SSRQRKVQLAVMYIDLDGFKSINDSIGHYFGDQVLIEVAQRLTQQVRPADTVVRMGGDEF 392 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +++L+ + + L + + L + DG+ E L+ Q Sbjct: 393 VVLLTDLLRDEDAVPVAERLLASIGKPYCIQGIDLHVSTSIGITVSDGHIEQPMKLIQQA 452 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 ++ ++ + + L N ++ A+ L+ QP + Sbjct: 453 DMAMYKAKQQGRN-NFQWYTSDLNHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIEARTRR 511 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPR 574 G + +L G ++P F+P+ L VL++ L G Sbjct: 512 VVGIEALLRWEHPVRGFISPAVFIPVAEDSGQIIPLSLWVLDTACAQLRDLCDQGFNGIS 571 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ P+ I + ++ +S + LEITE N E ++ + +L G Sbjct: 572 MAVNISPMHFQCGQFVECIQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLG 631 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 RIA+DDFGTG+++ LK L D IKID F++DI TN DA I + I +A SLSV Sbjct: 632 VRIALDDFGTGFSSLSYLKCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSV 691 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 VAE VET Q L + LQGY RP Sbjct: 692 VAEGVETAPQVNFLERGRCDILQGYYFARPMS 723 >UniRef50_Q2S7Q5 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7Q5_HAHCH Length = 832 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 107/577 (18%), Positives = 200/577 (34%), Gaps = 53/577 (9%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 +I P + +R++ P L W + ++ Sbjct: 254 VIGEPGNYYLTLQREVLPDLR-----IVGVWPMSELKENAFYLANQAAWLTLVLILVTSA 308 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ------NFLQGVETEYSLAFILAVLISFS 302 +IF++ G+L P +T L + +F + + + S Sbjct: 309 LIFSVVHGQLIKPISRVTQLAHLLGESHAETPPEAARDFQSTLRRRDEIGELARAFKSMD 368 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCC 354 L + A D LT L N RA+ +A Sbjct: 369 GNL----------RATASKLTFIAYHDSLTGLANRHTFGAFLHRAIAEAARHHFRLGLLY 418 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY---------------QLPGS 399 + ID + ++ G ++ I + L +++ + + ++ G Sbjct: 419 IDIDGFKDVNDSLGHEAGDLVLKEISQRLHNVLRAEDMVADMSAQYEAMEATKMSRIGGD 478 Query: 400 ELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +V++ + + H+V L + +G + + + LL Sbjct: 479 EFAIVVNHLHSPMDISHIVKRLLDAMQAPFQIESHSFLLGASVGIAVYPEDGKDAHELLK 538 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 S + + ++ ++ +++ IR+AL +G LY QP + Sbjct: 539 CADIAMYHSKRQGRN-GFEYFDTKMNHMAVERHQIISDIRSALQKGQFELYYQPQVSALA 597 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG- 572 G + +L + G ++P +F+P+ + VLE + Sbjct: 598 GNVMGCEALLRWRHPERGFVSPVEFIPIAEETGQIIEIGRWVLEEACRQCREWQAQGLDE 657 Query: 573 PRFSVNLMPLTLLQK-NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R SVN+ + +I + P + LEITE + + + + L Sbjct: 658 IRMSVNISAVQFSSSTDIVAVTREALAHSGLPPDCLDLEITETAMMQSDKVGVDKLNALK 717 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G I++DDFGTGY++ L+ L D +KID FV I ++ I+++I LAK S Sbjct: 718 NLGVSISMDDFGTGYSSLASLRDLPIDQLKIDKSFVDKINHDSQGRAIIKAILALAKELS 777 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VVAE VE + Q L +QGY + +P P Sbjct: 778 IEVVAEGVEERTQLDFLSLHRCDLIQGYYVAKPLPAD 814 >UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q2Y9Y0_NITMU Length = 756 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 96/494 (19%), Positives = 197/494 (39%), Gaps = 38/494 (7%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVC--LLYMVRIYHRSEWLNRRWHLQALTDP 330 ++++ L + + + + ++ ++ + + +++ + D Sbjct: 236 GGVDHDYRLLLPDMSIRWVHSRTFPIKDSAGVHRIVGVMDDITQRKQADQQLLQVSRYDA 295 Query: 331 LTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN ++ S L IDN + ++ G + +R Sbjct: 296 LTHLPNRILFYESLRKVIKQSEMNHRIVSVLFLDIDNFKNINDTLGFALGDELLREFSLR 355 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGA 439 LL ++ + + ++ G E +L + G + + + + + + Sbjct: 356 LLECLRVTDIVARIGGDEFGCILVSADDLGNAGLVASKIREALRQPFDLQGHQVTVTASI 415 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + L+ QS ++ + +++ N +R AL Sbjct: 416 GISVYPIDSIDADTLVKNGDTAMYQSKTAGRD-TYRFFTPEMNIRAIEKLDQENALRKAL 474 Query: 500 DQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 D+ + +L+ QP + G + +L + + G++ P +F+P + Q L R V+ Sbjct: 475 DREEFVLHYQPKVDLSNGWVTGMEALLRWKRPEHGVVEPLEFIPALEQTGLITRVGAWVI 534 Query: 557 ESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI--------------------IR 595 ES+ + +A G SVN+ + + + R Sbjct: 535 ESVCRQIAEWRHAGIGEIPVSVNVSGRQFSRSTLNQDVIRATQANGIQPALLEFELQTER 594 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + I + LE+TE +A+ ++ +++L G +I+IDDFGTGY++ +KR Sbjct: 595 ALRENSIDSDLLELELTESSLMMHAKKTVSILQRLKALGIQISIDDFGTGYSSLAYVKRF 654 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D++KID F+++I TN+ DA I +I D+A + + VVAE VET +Q L G Sbjct: 655 PIDVLKIDRSFIQEITTNSADAAITTAIIDMAHSLHVRVVAEGVETAEQFDFLKGRGCDE 714 Query: 716 LQGYLIGRPQPLAD 729 +QG+ + P P + Sbjct: 715 VQGFYLSPPLPANE 728 >UniRef50_Q21YJ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21YJ3_RHOFD Length = 765 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 110/471 (23%), Positives = 191/471 (40%), Gaps = 25/471 (5%) Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW---LNRRWHLQALTDPLTLL 334 N + SL F L +L S + L Y+ R+ + A DPLT L Sbjct: 279 NWREQRNFILGVSLLFALMILASGGLALWYLERLAQARQAIASSKAEIEQLAFFDPLTNL 338 Query: 335 PNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN R L + + L +D+ + ++ G + ++ + + L Sbjct: 339 PNRRLLMDRLQHALSANARSGRCGALLFLDLDHFKTLNDTLGHEVGDLLLQQVAQRLKTC 398 Query: 387 MQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYG 438 ++E + + +L G E +++L E + + + + + Sbjct: 399 LREQDTVARLGGDEFVVMLEDLAEHSLEAAALARRIGEKILASLNQPYVLMTQTYRSTCS 458 Query: 439 AAWGRFDGNQ-ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F+ T LL Q Q A L + + T L + ++ Sbjct: 459 VGAALFEATTPITAADLLKQADIAMYQVKARGRND-LCFFDPQMQASITAHAQLEDDLQA 517 Query: 498 ALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 AL +G+ LY QP + G + ++ L G++ P +F+ + + L + L V Sbjct: 518 ALVRGEFALYYQPQYQLQEGVVGAEALIRWLHPLRGLVPPVEFIAVAEESELINQIGLWV 577 Query: 556 LESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 L + + LA D + +VN+ Q + ++ + I P + LE+TE Sbjct: 578 LRTACQQLARWQGDPRACDLHLAVNVSARQFRQPDFVAQVSTVVHESGIKPHLLKLELTE 637 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N ++ + +L G R ++DDFGTG ++ L RL + +KID FV++I Sbjct: 638 SLVLDNVMDTIAKMNELKDLGVRFSMDDFGTGQSSLSYLTRLPLNQLKIDQSFVRNIGLQ 697 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 D +IV++I +A++ LSV+AE VET QQ L G QGYL G+P Sbjct: 698 ATDDVIVQTIIGMARSLGLSVIAEGVETPAQQEFLALHGCTLYQGYLFGKP 748 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 616 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 94/495 (18%), Positives = 183/495 (36%), Gaps = 19/495 (3%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 + +++ + L ++V+ Sbjct: 235 PRMLKSGHHDAAFYADISKTLEVRGHWRGEILDRTRDGRVIPLLQTISVVRDTQGAVSHY 294 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + +V + R A DPLT LPN E +A + + Sbjct: 295 ITIVTDISSIKETQSRLDFLAHHDPLTELPNRLLFTARLEHAIDWAVRNQAHFGLLFIDL 354 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + + + R L L+++++ + +L G E ++++ G G + + Sbjct: 355 DRFKTINDSLGHQLGDRLLVQVARRLRGLVRKSDTIARLGGDEFVVLVEGIHNAGEAELL 414 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 L + T L +G + + E LL + Sbjct: 415 AEKLVHAMRQPFFLEETELHIGCSIGITLYPEDGEDPVTLLKNADAAMYRVKDFGRD-GF 473 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + ++ +++ L +R AL + L ++ QP+ + + + + G Sbjct: 474 CKFSQDLAEAVDERLALETALRQALRENQLQVHYQPVIDLAQGRMVAVEALARWRHAERG 533 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIA 590 + P F+ L + L + + + S+N + L Sbjct: 534 EIAPCSFIRLAEETKLILPLGGWMARTAIGQFRLWRERGMELDYVSINTSGIELFDPGFV 593 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + + + +E+TE + E+ + +L + G RIAIDDFGTGY++ Sbjct: 594 DGLFEALDEHGLEGRHLQIELTENVLMQDYEACRRVLLRLRQQGVRIAIDDFGTGYSSLA 653 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+L D++KID F+KD+ + D IV +I +A L+ VAE VET++Q+ L Sbjct: 654 YLKQLPIDMLKIDRSFIKDVPGDPGDCAIVETIIAMAHRLGLATVAEGVETEEQEDYLLA 713 Query: 711 LGVQYLQGYLIGRPQ 725 +G + LQGY RP Sbjct: 714 IGCERLQGYRYARPL 728 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 86/451 (19%), Positives = 175/451 (38%), Gaps = 15/451 (3%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE- 347 ++ + + ++ + + A D LT LPN + Sbjct: 413 VNINAVHDPNTDALTHFVSVIADISNIKASEEKLSHLAHHDALTNLPNRLLFSARLDHAL 472 Query: 348 -AGKS----FCC-LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 ++ L +D + ++ G + + L ++ + + L ++ G E Sbjct: 473 THREASEKIVMFHLDLDRFKHINDSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDEF 532 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +++ E + + + L + + + + + L Sbjct: 533 AILVEELEHVSDAESIADRLVEAMEQPFTLDGKDYFTTASIGLALAPDHGDDIDTLTKHA 592 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--- 515 Q+ + +S + + L +R AL + L+ QP + Sbjct: 593 DIALNQAKDSGRN-NFAFFQPELSETVQEWIKLEPELRKALAENQFQLHYQPQVDSTGTA 651 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPR 574 G + ++ + GI+ P++FLP+ + L + V+ + L+ L+ G R Sbjct: 652 IVGAEALIRWHHPEMGIIPPNQFLPIAEEIGLMNKIGEWVMNTALEQLSFWRSRGLIGFR 711 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++NL + ++N+ +++ + + I + + LEI E + E + +QL + G Sbjct: 712 LAINLAGDQITKQNLPMVVMQALEHFQIPAEMLELEILETFLMEHEEEATSTFKQLRELG 771 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +++DDFGTGY+ LK+L +KID V+DI + D I +++ LA L+V Sbjct: 772 VHLSLDDFGTGYSALSYLKKLPITKVKIDQSLVRDIPEDPNDEAIAKAVILLAHTLDLTV 831 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 AE VET+ Q+ L LQGYL +P Sbjct: 832 CAEGVETRAQREFLESENCDQLQGYLFSKPI 862 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 93/485 (19%), Positives = 189/485 (38%), Gaps = 15/485 (3%) Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWL 318 R +L + + G + S + + + +L + Sbjct: 450 RQLLAHLIERKEHKVQMEASIRSSNGQMLQISWLHSVLSVPGGDIRVLTIGLDLTERMHA 509 Query: 319 NRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLM 370 +R A DPLT LPN ++ E+ + +D+ + ++ G Sbjct: 510 EKRLVWMANHDPLTALPNRLLFTEKVDEAIKRYQEKNGILAILFCDLDSFKDVNDSLGHP 569 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH 427 + ++ + ++ + L +L G E ++L G ++++ + + Sbjct: 570 VGDELLQQAAERIQNIICNDGVLARLGGDEFTVLLEGRANIREIENVAQHIIRAFRQSFF 629 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + + + + L+ + L + Q + Sbjct: 630 IDGYEIFSTISIGISLHPDHGDNVTSLIQHADVAMFDAKESGKNQ-LRFYHDEQGSQRYE 688 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L+N +R AL++ + ++ QP + G + +L + G+++P KF+PL + Sbjct: 689 RFSLVNDLRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAEE 748 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL + R VN+ ++ +++ G + I P Sbjct: 749 QGLIVPIGEWVLRESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIRP 808 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE E ++ + + + G +++DDFGTG+++ LK+L + +KID Sbjct: 809 HLLDLEVTENFLLKQPEITIPKLHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTLKIDQ 868 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+DI ++ IV++I LAK+ L +AE VET +Q + L G +QGY RP Sbjct: 869 SFVRDIGSDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSRP 928 Query: 725 QPLAD 729 P + Sbjct: 929 LPAEE 933 >UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B3_MARMS Length = 734 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 91/435 (20%), Positives = 182/435 (41%), Gaps = 11/435 (2%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----EAGKSFCCLRIDNL 360 +L + + + + A D LT LPN AL + + + + +D+ Sbjct: 282 MLGVRIDIDEIQKAHDQVEWLAHHDSLTKLPNRVALNKTFHKIIKPNTKIALLFIDLDHF 341 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH--MV 418 + ++ G + + ++ + L+ + + G E +++L E ++ + Sbjct: 342 KNVNDTLGHSIGDQLLLTVADRMRTLVNNIGYVARQGGDEFIILLPADNEECLIEKTCAI 401 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 S + + + + + N E L + + Sbjct: 402 KEALSARYNIDQHQFFITPSIGVSLYPRNGEDFDTLYQRADAAMYHAKHTGRNR-YAFFT 460 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 E + +T+ + L N + A+++ + L+ QP + + G + ++ + G ++P Sbjct: 461 EEMQAISTRALTLGNALHDAIERQEFSLHYQPQISLITGKIIGAEALIRWHSLELGHVSP 520 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 +F+PL + VL + L + R +VNL ++ + Sbjct: 521 GEFIPLAEENGQILAIGEWVLRETARQLKQWLEEGITPVRIAVNLSYAQFQVNDLPSIVE 580 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + Y + Q + LE+TE A + E ++ +E + G +IDDFGTGY++ L+R Sbjct: 581 AILNEYAVPAQYLELELTERIATKDPEHTITILESFQQLGIHTSIDDFGTGYSSLSYLQR 640 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 +KID FV+++ TNT D +IV +I LA+ ++ +AE VET+ Q +L+ +G Sbjct: 641 FPVYKLKIDQSFVRNMTTNTNDQVIVGTIILLAQQLGMTTIAEGVETKAQLEMLYNIGCD 700 Query: 715 YLQGYLIGRPQPLAD 729 +QGY I RP P + Sbjct: 701 DIQGYYISRPIPAEE 715 >UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBA9_AZOSB Length = 726 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 111/589 (18%), Positives = 206/589 (34%), Gaps = 24/589 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + V L + L L M ++ L R + S + Sbjct: 125 PYHVAQLQRAVESALHKAALERANRAMSQRLRTSERLHRYLVESSPDLIFTLDAEGRFSY 184 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 L+ + L N + + + L Y + + L L Sbjct: 185 LNPRVKALLGYDRNVLMRRPFTTLVMPEDVDRIATLLYAPVAGPGESFHVELRLRRNREL 244 Query: 283 QGVETEYSLAFILAVLIS-------FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 ++ + L + L + R + QA D LT LP Sbjct: 245 LAGDSPEWITVALTGIPMPAREDGRRGGGLYGVARDISERKRAEEIISFQAYHDQLTRLP 304 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + + + + +D + ++ +G +R I L + Sbjct: 305 NRVLFKDRLELAIAQAQRRTGALAVMFIDVDRFKLVNDTFGHAEGDMLLRGIAARLAGTL 364 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 + + L +L G E ++L + + + S ++ F Sbjct: 365 RRGDTLARLGGDEFTVLLPDINGPQDAEVIARKILDSLSAPFPLSHGDFRATASIGIALF 424 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + + L Q + ++ ++++L N +RTAL++ + Sbjct: 425 PRDGDGAEDLTRHADIAMYQVKRSGKN-GFRFFDIALNSHYRERIVLENDLRTALERREF 483 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L+ QP + G + +L + G+++P F+P+ + L VLE Sbjct: 484 ELHYQPQISLTQHRVVGMEALLRWNHPNLGLVSPATFIPVAEEMGLIGDISRWVLEEACG 543 Query: 562 WLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 LA R S+NL P +++ + +R+ + P + LEITE +A Sbjct: 544 QLARWREAGHNDLRMSLNLSPHDFDSQDVVTMVTECVERHRLPPSQLELEITESMMMQDA 603 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + L + G +AIDDFGTGY+ L++ +KID FV+++ I+ Sbjct: 604 AGVAAKVRGLREAGLSVAIDDFGTGYSALAYLQKFPVSTLKIDRSFVRELEG-PNTNPII 662 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +IT +A+ L ++AE VE +Q L LG +QG+L RP P A+ Sbjct: 663 SAITGIARGFGLQLIAEGVERSEQAETLRTLGCDVMQGFLYARPAPAAE 711 >UniRef50_Q483V3 Sensory box/GGDEF/EAL domain protein n=5 Tax=Alteromonadales RepID=Q483V3_COLP3 Length = 692 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 94/439 (21%), Positives = 178/439 (40%), Gaps = 16/439 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 ++ ++R QA D LT LPN + L +A + L Sbjct: 244 QIVLIIRDISEQYKSAEIIRHQAYFDTLTSLPNRFLALDRLSQMLTEAERNNEKIAVLFL 303 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ G + + L +++E + + +L G E +++L G Sbjct: 304 DLDDFKKINDSLGHEIGDKVLIQSAHRLKQVLREGDTVGRLGGDEFIVLLRGVTENHDAL 363 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L + L + N LL ++ Sbjct: 364 VITENLLKSFREPFVIDGRELMLTLSIGVAISPENGRCASDLLRNADTAMYKAKDLGRN- 422 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + ++ ++ + + AL++ + LY QP + ++ G + +L Sbjct: 423 TYSFFSKKMNTMMLRRFEVEEQMHGALERNEFELYYQPQFDVKKQKITGVEALLRWHNSV 482 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKN 588 G +TPD+F+P+ L V++ L +L ++ +VNL P Sbjct: 483 LGNVTPDEFIPIAEHTGLIIPIGRFVIKQALGFLNKWQNIHQQKFTMAVNLSPCQFRDST 542 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + G I ++ + + LEITE S + ++ + G ++++DDFGTGY++ Sbjct: 543 LLGFIKDSLSETNVIAEHLELEITEGVLMSGQSHIHDALVEISELGIKLSMDDFGTGYSS 602 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L++ D++KID F++ I N D +V +I +A + L+VVAE VET++Q LL Sbjct: 603 LSYLRQYAFDVLKIDQSFIRGIPLNKADCELVNTIIAMAHSLGLTVVAEGVETKEQLTLL 662 Query: 709 HKLGVQYLQGYLIGRPQPL 727 +LG +QGY +P P Sbjct: 663 EELGCDLVQGYYFSKPIPA 681 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 95/461 (20%), Positives = 173/461 (37%), Gaps = 17/461 (3%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + + A D LT L N R Sbjct: 380 RADGETYPSLLSVSAVTNDNDEVTHYIGIASDITSHKAAEQHIDYLAHYDTLTGLGNRRL 439 Query: 340 LEQAP-------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 LE+ + L +D + ++ G + + L L Sbjct: 440 LEEELERMLRNARGGRPFALFFLDLDRFKNINDTLGHESGDRLLEEVADRLRDLAGPQAT 499 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 L ++ G E ++ G ++ SR L + + Sbjct: 500 LCRIGGDEFAILAPGLSHRQTAGIARQLVEGISRPYEITERPLVVTCSVGVAVHPRDGTR 559 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + L+ AH E ++ +++ L N +R AL +G+ LY QP Sbjct: 560 REALISAADTALHYVKAHGSNH-YQFHEPGMTAAAAERLHLENDLREALLRGEFELYYQP 618 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + G + +L + G++ PD+F+PL + L VL A Sbjct: 619 VLDTERLTVCGAEALLRWHHPEAGLIPPDRFIPLAEETGLIRPIGTWVLREACAQAARWR 678 Query: 568 CDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 G SVN+ + + + + + ++P A++LEITE + ++ Sbjct: 679 RLGLTGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPDALVLEITESVLMHGSANTETR 738 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + +L G +++DDFGTGY++ LKR D +KID FV+D+V + D + +++ + Sbjct: 739 LRELKAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAM 798 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 L VVAE VE+ + LL + +QGY RP P Sbjct: 799 GHGLGLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPA 839 >UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850699 Length = 676 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 115/573 (20%), Positives = 218/573 (38%), Gaps = 22/573 (3%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----T 232 + L + L + ++ ++ +E +L ++V+ T Sbjct: 91 FFVQLCFMLLSWFIPDILSEETLQKQYDQLKEREIWYHSLFENNPVAVITFDHRGNIKHT 150 Query: 233 PYENDFIAGYLVP-VFFIIFTLGVGKLRYPFLNLTWAVSTLCLL-NYNQNFLQGVET--E 288 + + GY V F V +P + + + + + N+ + + Sbjct: 151 NPKIFELTGYQEDYVVEHSFKPYVHHKDHPIIYKEFKKALVGVGSNFELRLIHQDGRILQ 210 Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----- 343 + + ++ + V + +V S+ ++ H A D LT LPN R EQ Sbjct: 211 TMIVMVPVLIENKVVGVHCLVTDITTSKEAEKKIHHMAYHDDLTGLPNRRYFEQITAEII 270 Query: 344 PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 Q + L ++ + ++ G + I R + + + + ++ G E +L Sbjct: 271 KRQPMKMAILLLDLNRFKVVNDTLGHAAGDQLLIEIARRIDDKIGVQDHVARMSGDEFIL 330 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L + + H+ N + + I N+ + + + E L LL Sbjct: 331 LLPTIRGKADVFHIANHIHKSLEQPILINDHEIITSTSIGVAMYPDHGEDLTTLLKTADV 390 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGE 517 + + + + L IR+A+ D L+Y QP N Sbjct: 391 AMYTAKKKGAAQTF-FYSNSLHAKEINPIQLEEDIRSAIKHEDFLIYYQPKFSTINGRMI 449 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 G + ++ GI++P F+PL + L VL + L S Sbjct: 450 GVEALVRWKHRHKGIISPGHFIPLAEETGLIIPLGAHVLRKVCLKLKEWESRGHKDIIVS 509 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + + + ++P+ + LEITE A + +++L + G Sbjct: 510 VNVSSRQFHDDHFLQTVRDILIETGVNPRQIELEITESTAMEQVYRAERILKELSELGIT 569 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I IDDFG Y++ LK+ D +K+D F+++++TN + IVR+I +A L +VA Sbjct: 570 ITIDDFGIEYSSLNYLKKFAVDTLKVDKSFIRELLTNESNQAIVRAIIVMATHLQLDLVA 629 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L G QY+QGY RP P + Sbjct: 630 EGVETEEQLKWLQMNGCQYVQGYYFSRPIPCEE 662 >UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBI7_METSD Length = 681 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 96/441 (21%), Positives = 173/441 (39%), Gaps = 16/441 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + ++ M + + R H A D LT LPN L Sbjct: 235 IAVIGMGQDVTETYEYQERIHHLAYFDTLTKLPNRALLIDRVEQTIAEAERHAYPFGLIM 294 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + + + L ++ + + +L G E +++S + Sbjct: 295 LDLDRFKEINDTLGHTLGDVLLCEVASRLEKCVRPYDTVARLGGDEFGILVSEMRVPENI 354 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + + + + + + + + LL + Sbjct: 355 TRVADKVLQAFDQPFVVDGHDVFVTASLGIAAYPSDSQAVDDLLKYADSALFHAKHLGRN 414 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 ++ + ++ + +R AL + + LL+ QP+ + E G + +L Sbjct: 415 -NFQFYSADLTIKAAERREVETNLRFALKKEEFLLHYQPLVDLATREIIGAEALLRWQHE 473 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL-ATHPCDKKGPRFSVNLMPLTLLQK 587 G ++ PDKF+ + + L V+ S + A + + +VNL L Sbjct: 474 SGKLIMPDKFIGIAEETGLIIPIGEWVMRSACQVAVALNRGRPRPVTVAVNLSTRQFLHN 533 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ I + + LEITE N ++ ++ L G I+IDDFGTGY+ Sbjct: 534 DLVSSIQAILAETGCHTDWIKLEITESLLLENTDNIQRMLQSLSAMGLCISIDDFGTGYS 593 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 L R +KID F DI N A+IV++I LA+ + +VVAE VET +Q Sbjct: 594 ALSYLHRFPVRELKIDRSFTSDITDNAERALIVQAIVSLARNLNKNVVAEGVETLEQADY 653 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 LHK+G QGYL +P PL Sbjct: 654 LHKMGCPQAQGYLFSKPLPLE 674 >UniRef50_Q2SPM3 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPM3_HAHCH Length = 826 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 101/446 (22%), Positives = 175/446 (39%), Gaps = 23/446 (5%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 L + R A DPLT LPN A + + + Sbjct: 369 LIVSVDITDRVEAQSRVEQLAFHDPLTGLPNRNLFYDRLTMDIARSRNHGAYGALLLIDL 428 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEG 412 DN + ++ G + +R++ + L + E + +L G E +++ E E Sbjct: 429 DNFKNINDSLGHSVGDELLRNVAKNLRNCLDEEITVGRLGGDEFTVIMPELGRTPEEAEQ 488 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + S +N + + + +L Q+ Sbjct: 489 NANLIAAKVLSELSTPFFFNTQEFTVTASMGVALYPDKDANTEVILRYADTALFQAKHEG 548 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 + ++ +K++ + N +RTA+ L+ Y QP + G + ++ Sbjct: 549 RNKVT-IFKAEMADAVSKRLSIENELRTAVKDKALMFYYQPQVSVTDGRIIGAEALIRWN 607 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLT 583 G++TPD+F+P++ NL L + + + R +VN+ P Sbjct: 608 HPQRGLITPDEFVPVLENSNLILTAGLDMFTQACMQVKEWLDKGWWEEDMRVAVNVSPKQ 667 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q +II + + + + LE+TE N + ++ + L G R ++DDFG Sbjct: 668 FYQPEFVEQIIEILEATRLPAYCIELEVTESVVIQNVKDTINKMLSLKGLGVRFSLDDFG 727 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL D +KID FV DI ++ DA IV +I +A L VVAE VET + Sbjct: 728 TGYSSLSYLKRLPVDSLKIDRSFVTDINSDVNDAAIVSTILAMAAHLDLEVVAEGVETVE 787 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 L + Y QGYL +P P + Sbjct: 788 HLEFLKENECDYYQGYLFSKPLPAEE 813 >UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=A5ETN6_BRASB Length = 1047 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 101/450 (22%), Positives = 178/450 (39%), Gaps = 18/450 (4%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------E 345 ++ L+ ++ + R A D LT LPN + Sbjct: 584 IVVTDDRQRPRYLINVIEDTTERRLADERIAHLAHYDALTELPNRVLFRERIAHEIERAR 643 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L ID + ++ G + +R+I + + + + +L G E ++L Sbjct: 644 HGMFFALLYLDIDEFKGINDSLGHHVGDELLRTIASRIRSCLAPEDTVARLGGDEFAVLL 703 Query: 406 S-GPETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + + + + IL L + + L Sbjct: 704 TMAADRDEVIAKVTEILERIREPYRCLGHQLSTDASIGIALAPEHGVEIDQLTKHADLAM 763 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGY 519 + A E + +++ L +R A+ +G L+ QP+ G Sbjct: 764 YAAKADGR-HTFRFFEPAMDESARERLQLQQDLRRAITEGQFELHYQPLLGFRENIMTGC 822 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + +L + G++ P F+PL L V+ + A P R +VN+ Sbjct: 823 EALLRWRHPERGMVPPLDFIPLAEDTGLINEIGDWVMRTACAEAAHWPS---DIRVAVNV 879 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P+ L +A + ++P+ + +EITE + + ++ + QLH G RIA+ Sbjct: 880 SPIQLKSPTLALHVASALSAAGLAPERLEIEITEAVLIGDDDVALDILHQLHAMGVRIAL 939 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR D IKID FV DI ++ IV+++ +A A +++ AE V Sbjct: 940 DDFGTGYSSLSYLKRFPFDKIKIDRCFVSDIGADSSS-AIVQAVVSIAAASNMTTTAEGV 998 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET QQ L +LG +QGYL P+P A+ Sbjct: 999 ETGAQQTALRQLGCTEMQGYLFSAPKPAAE 1028 >UniRef50_C4KCC9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4KCC9_THASP Length = 748 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 103/447 (23%), Positives = 178/447 (39%), Gaps = 23/447 (5%) Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + L + R + QA D LT LPN + + + Sbjct: 282 RVIGLYGVARDISERKRAEEIISFQAYHDQLTHLPNRVLFKDRLELAIAQAQRRTGALAV 341 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + ID + ++ +G +R+I L ++ + L +L G E ++L Sbjct: 342 MFIDIDRFKLVNDTFGHAEGDLLLRAIASRLSATLRRGDTLARLGGDEFTVLLPDINQPE 401 Query: 413 RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + + + + F + T + L Q Sbjct: 402 DAEVIARKVLDALATPVRLSQGEFRATVSVGIALFPRDGTTAEDLTRHADAAMYQVKRSG 461 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARL 526 A + ++ + ++ L N +R A+ +G+L L+ QP + G + +L Sbjct: 462 KN-AFRFFDPELNTRHRDRIALENDLRGAVARGELDLHYQPQVSLATRGIVGLEALLRWN 520 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 G + P F+ + + L + VLE+ LA + G PR S+NL Sbjct: 521 HPGLGAIPPATFIQVAEEVGLISEISNWVLETACAQLARWQAEGVGAPRVSINLSACDFQ 580 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + ++ GRI R+ ++P + +EITE + + L + G +AIDDFGTG Sbjct: 581 RGDVVGRIRACLDRHGVAPSCLEVEITEGLMMDDTADIAAKVRALREAGISVAIDDFGTG 640 Query: 646 YANYERLKRLQADIIKIDGVFVKDIV---TNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 Y+ L+R +KID FV+D+ TN I+ +IT +A+ L +VAE VE Sbjct: 641 YSALAYLQRFPVSTLKIDRSFVRDLEGPMTNP----IISAITGIARGFDLDLVAEGVENL 696 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L LG + +QGYL RP P + Sbjct: 697 EQADALRALGCEVMQGYLFARPAPAGE 723 >UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WB0_RHOFD Length = 499 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 99/451 (21%), Positives = 180/451 (39%), Gaps = 16/451 (3%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAP 344 L + + ++ + + QA D LT LPN +AL +A Sbjct: 40 VTLNAVPDGVLRIVCV-HDLSERKKFEESLRYQATHDELTGLPNRWLFHLHLSQALVRAR 98 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D ++ +G + + + ++EN+ L +L G E ++ Sbjct: 99 RTGLRVAVLFLDLDYFRSVNDSFGHTTGDALLVQVGTRIRSTLRENDTLARLGGDEFAIL 158 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ + + + L + + G + + + LL Sbjct: 159 LADMKNVDEAVRVASKLLLSLQASYRLQDQDVYSGGSLGLAFYPDDAQDSDTLLRYADMA 218 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 Q+ + + + + + L ++ A+ QG L L+ QP + G Sbjct: 219 MYQAKQAGRG-GYACYSQEMDLRGHENMRLHTRLKEAMAQGILQLHYQPQVDVESGAIVG 277 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 + +L + G ++P +F+P+ L VLE+ + +A R +VN Sbjct: 278 AEALLRWHDPELGHVSPARFIPVAEATGLILPLSDWVLETACQQIAAWTQAGTPLRVAVN 337 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + Q+N+ ++ R Q + +EITE A + + ++ L G RIA Sbjct: 338 VSAQQFRQRNLPEQVRAALARTGAQAQWLDIEITESVAMTQPAQAREQLDALVGLGCRIA 397 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LK L +KID F+ I + D I R+I LAK+ L++VAE Sbjct: 398 LDDFGTGYSSLAYLKALPVSKLKIDKSFMDGIPQDANDVAISRAIIALAKSLGLTLVAEG 457 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q A L + G + QG+L + + + Sbjct: 458 VETDAQLAFLRQYGCEVYQGWLFAKAMTVQE 488 >UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BUE4_DELAS Length = 692 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 102/551 (18%), Positives = 203/551 (36%), Gaps = 26/551 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 E+R + + ++++ + + L + + L + Sbjct: 129 HHVAQKVRDSEERMRKFTEVTTEAIVMHRDGLIIDGNEALSRL--AGYTLDELTGRPILD 186 Query: 261 PF-----LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHR 314 L + + ++ + + + + +VR Sbjct: 187 YICPEFRLYALQYMRSGREDRFDGAIQHKDGHRIPVEIEAKTMPAEGEPYRIVLVRDITL 246 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRH 366 + R A D LT LPN L Q Q + + +D+ + ++ Sbjct: 247 RQLAQERMDFLAQHDQLTQLPNRVRLIQMLRQALSLASVKRRALAVLIIDLDHFKTINDS 306 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILNS 423 G + + + L ++ ++ + ++ G E ++VL+ + + Sbjct: 307 LGHQAGDLLLCEVAQRLRGSVRAHDLVARVGGDEFVVVLTDDPDPQETETQASHLQRIIE 366 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + T L + + G+ + + LL + + L G Sbjct: 367 APCAIDGTPLVISPCMGIAMYPGDGKNAEELLNRAESAMHMAKDSGR-RNLQFYAPAQDG 425 Query: 484 QT-TKQVLL-LNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKF 538 Q Q+L+ +R AL++G+ LY QP + G++ ++ G++ P +F Sbjct: 426 QATQAQMLMQEQQLRGALERGEFELYYQPQTFTADGRLAGFEALVRWRHPQRGLVLPGEF 485 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 + L + D VL + + SVNL L Q+++A + ++ Sbjct: 486 IGFAEARGLISAIDHWVLREACRQARQWQDEGLAPVPLSVNLSALEFRQRDMAREVAQVL 545 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + + + +E+TE + ++ L G +AIDDFGTGY++ L+R Sbjct: 546 EETGLEARWLHIELTESTLMHTSGQVQDTLQALQALGVGLAIDDFGTGYSSLAYLRRHPI 605 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 + +KID F+ D+ + D IV +I + + L +VAE VET Q ALL +LG +Q Sbjct: 606 NQLKIDRSFIADVPDSEDDTAIVTAIVQMGHSLHLDIVAEGVETPAQLALLRELGCGMMQ 665 Query: 718 GYLIGRPQPLA 728 GYL+ P P Sbjct: 666 GYLVAPPLPAE 676 >UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR2_9RHOB Length = 1031 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 104/462 (22%), Positives = 187/462 (40%), Gaps = 21/462 (4%) Query: 281 FLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 L + ++ L + VR + + R A D LT LPN Sbjct: 521 LLSKTGERIPIEVRGRLMEVGDENLRVSAVRDMRKQKEDEARILHLAQHDMLTGLPNRTY 580 Query: 340 LEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + +Q + L +D + ++ YG + I+++ R L + + Sbjct: 581 FRERFQQAIENQACAEETISAVMVLDLDRFKDINDLYGHPVGDKLIQTVARRLNACVTHH 640 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDG 446 + + +L G E ++ +T + + N + S+ IH NN + Sbjct: 641 DTVARLGGDEFAIIQVNLKTTAEVGLLTNKIIEVLSKPIHVGNNITIRTSASIGIALIPE 700 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + L+ + ++ E+ + + + +R AL+ +L L Sbjct: 701 HGTDPDELMSKADIALYEAKEAGRN-TFAFFEDKMEEAILLRRTMEGDLRNALENEELQL 759 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 + QP + G++ +L + G++ P+ F+P+ + L VL Sbjct: 760 HFQPQARSDTRSIVGFEALLRWNHPEKGLIAPNNFIPVAEESGLIIPIGRWVLNEACAQA 819 Query: 564 ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + P R VNL P+ + + + R ++P+ + LEITE + + Sbjct: 820 SQWPERY---RVGVNLSPVQFCDEYLIQEVEGALARSGLTPERLELEITESVLIHDDRRA 876 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + QL + G IA+DDFGTGY++ L+R D +KID FV + A I+R++ Sbjct: 877 LNTLRQLKELGITIALDDFGTGYSSLSYLRRFPFDRLKIDRSFVSGVTQTPELAAIIRAV 936 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 DL +A + V+AE VET+ + LL +QGYLIGRPQ Sbjct: 937 IDLGQALGMEVIAEGVETEPELELLRNESCDEVQGYLIGRPQ 978 >UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=B1J7P7_PSEPW Length = 699 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 106/444 (23%), Positives = 187/444 (42%), Gaps = 18/444 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + +L++ + + H A D LT LPN + + + + Sbjct: 250 GQADYVLFVAEDATEELAAHAQIHHMAHHDALTGLPNRTLFNERLKQALVRGHQNDKLTA 309 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 CL +DN + ++ G +R++ + L ++E + L +L G E +VL+G + Sbjct: 310 ALCLDLDNFKNINDSLGHAFGDKLLRALGKRLRRELREQDTLARLGGDEFAVVLTGLDGR 369 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + L +G + E + LLG ++ + Sbjct: 370 EAACNTAKRLIEAICPPFQIEGHQFTVGVSIGIAIAPDDNEQAEQLLGYADMALYEAKRN 429 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILAR 525 + + ++ L+ +RTAL G L L+ QPI +++ GY+ +L Sbjct: 430 GRNR-YECFHVELDVAARQRRLVETDLRTALHLGQLHLHYQPIVDQQTSSVTGYEALLRW 488 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 G++ P F+P+ + L + L + A+ ++ SVNL P+ Sbjct: 489 EHPTRGMVMPMDFIPIAEETGLIHELGTRALNLACQEAASWDSEQ---TVSVNLSPVQFK 545 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 N+ + ++PQ + LEITE N+E ++ + L G I++DDFGTG Sbjct: 546 NANLVHTVALALADSGLAPQRLELEITESVLLGNSEENVRTLRALKDLGVSISLDDFGTG 605 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L+ D IKID FV D+ + IVR+IT+L+ + + AE VE+++Q Sbjct: 606 YSSLGYLRSFPFDRIKIDKSFVHDMCDSREAMSIVRAITELSNSLMIKTTAEGVESEEQM 665 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L G + QGYL GRP P + Sbjct: 666 QRLAAEGCSHFQGYLYGRPVPAGE 689 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 101/465 (21%), Positives = 188/465 (40%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + +++ + + + + + A DPLT LPN Sbjct: 582 RKNGELYPKWMTMRRMLNQYGETAFFVGVFVDISTQKATEEQMERLAYYDPLTKLPNRAL 641 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + L ++ + ++ YG + + + ++ ++E++ Sbjct: 642 FHERLTQSITTAKRYKRHVGVVMLDLNRFKLINESYGYGVGDGLLIQVAERIVERLRESD 701 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ + L + EG + + N L + N L + + + Sbjct: 702 IVARIGADTFAITLVDLKQEGEITGVANNLLKQFVMPFLVNGHELMLRTAMGIVLYPTDG 761 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + + LL + Q+ V E +S + K++ L + TAL+Q D +LY Sbjct: 762 QDAETLLRHVENALGQAKQQG-VNNYRFYSEEMSNISNKRLALEQEMHTALEQRDFVLYY 820 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + G + ++ G+++P +F+P+ + L L +LE+ Sbjct: 821 QPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFIPVAEETGLIVPMGLWILETACAEAKR 880 Query: 566 HPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VNL +N+ I I P + EITE N E S+ Sbjct: 881 ITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNSAIDPSMLEFEITESMMMGNVEKSI 940 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + + G +AIDDFGTGY++ LKR + +KID F++D+ ++ DA IV +I Sbjct: 941 ETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTLKIDQSFIRDLGVDSDDAAIVSAII 1000 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A+ +L VVAE E +Q L + G + +QGY RP P D Sbjct: 1001 SMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYYFSRPLPQTD 1045 >UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Comamonadaceae RepID=A9BNX4_DELAS Length = 916 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 112/612 (18%), Positives = 219/612 (35%), Gaps = 30/612 (4%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN---MLFYYLTRMIVSPHFAQIL 199 + L +S+ ++ L + VL+ + Y+ R+ + AQ Sbjct: 279 GHLWVTASLPMSSVLASWRVAAWLMVLAVMIFGVLLAVLGWTVHRYMDRLHAARRQAQRS 338 Query: 200 WRRDIAPSLGKEKRAFTLS--WLAALSVLLLLLCTPYENDFI--AGYLVPVFFIIFTLGV 255 + L P+ D + L + + Sbjct: 339 EQWLDQALDSMVSGFLLLDSQQRVLRWNRCYEEMFPWHADQLEPGRPLQSLLDSCPSAVG 398 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 + +L F Q + + + + ++ Sbjct: 399 LAAAPAQAYEAKDLHRQLVLRPGVPFEQQLPSGRFVQMTARLAAE--DGVVITYNDVTDI 456 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 A DPLT LPN R L + + L +D + ++ Sbjct: 457 RLATAEIESLAFYDPLTSLPNRRLLLDRLAQATVLAAREGWTGALLFLDLDQFKMLNDTL 516 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-GRLQHMVNIL----- 421 G + ++ + L ++ ++ + +L G E +++L E + + Sbjct: 517 GHEVGDQLLQQVAHRLRSAVRSSDTVARLGGDEFVVMLCELSHEPAEAATLAQRIGEKIL 576 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 ++ F ++ LL Q Q A + L + Sbjct: 577 ARLNQSYVLGAHLHRSACSIGATLFGRQPQSAAELLKQADIAMYQIKARNG-SGLCFFDP 635 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDK 537 + + ++V + +R AL Q L+ QP E G + +L + G++ P Sbjct: 636 QMQVEIHQRVRMEGDLRQALAQSQFELHYQPQFTLAGEVIGAEALLRWRHPERGLVPPGM 695 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+ + + + + V+ + + LA + + +VN+ +N A ++I Sbjct: 696 FIAVAEESEIIVPLGMWVIRTACEQLAIWQKDARLRHLQVAVNVSARQFRHQNFASQVIE 755 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + I+P + LE+TE N + S+ ++QL G ++DDFGTG+++ L +L Sbjct: 756 QVRNAGIAPHLLKLELTESLVIENVQESIDKMKQLRSHGVCFSMDDFGTGHSSLTYLTQL 815 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + +KID FV+ + D +IV++I +A+ +L V+AE VET +Q+ALL G +Y Sbjct: 816 PLNQLKIDQSFVRHLGLRHTDDVIVQTIIGMARNLNLDVIAEGVETLEQRALLAHYGCEY 875 Query: 716 LQGYLIGRPQPL 727 QGYL P P+ Sbjct: 876 FQGYLFSPPVPI 887 >UniRef50_D2L6G6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6G6_9DELT Length = 814 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 103/466 (22%), Positives = 186/466 (39%), Gaps = 20/466 (4%) Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + G + L+ + S +V + L + A DPLT LPN Sbjct: 333 ICGTDKTLLLSLFPMGIDEASRLAGGLVSDITDRKHLENQLAHMAFHDPLTGLPNRSLCL 392 Query: 342 QAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 Q + L +D + ++ G M + + R L ++ + Sbjct: 393 DRIRQAIERSKRRENYQYAVIFLDLDRFKVINDSLGHHMGDRLLEGVSRRLRDCVRGLDT 452 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E +++L + + +V + S + + + + Sbjct: 453 VARLGGDEFVVLLEETGSNREIIRIVKRIRTAISDIFVLCDHDIHVTCSMGIVISPALYD 512 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL + ++ + + + L N +R AL +G+ L Q Sbjct: 513 KPEELLRNANIALHRAKGEGRNR-FKVFNTRMLEDAIRLMDLENDLRLALKRGEFFLDYQ 571 Query: 510 PI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 PI R++ G++ ++ + G+ +P +F+P+ L L VL + +A Sbjct: 572 PILALRDRRLTGFEALVRWRRPGKGVASPMEFIPVAEDTGLIVPLGLWVLGEACQTMAAW 631 Query: 567 PCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 SVNL L Q + + R+ + + P+ + LEITE N E S Sbjct: 632 QKRFPGAEHLSMSVNLSAKQLAQPTMVEEVERILRATGLDPRTLKLEITESVIMDNPEVS 691 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + +++L + G R+++DDFGTGY++ L+R D +K+D FV DI + + IV ++ Sbjct: 692 ILRLKRLKELGVRLSVDDFGTGYSSLSYLQRFPIDTLKVDRAFVSDIEA-SENRKIVGAV 750 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA + L VVAE VE + Q +L + QG+L RP D Sbjct: 751 VALAHSLGLDVVAEGVELETQSDVLEGFNCEAGQGFLFSRPVCGED 796 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 100/569 (17%), Positives = 200/569 (35%), Gaps = 27/569 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + I A+ G + W +A +V L + G + Sbjct: 649 MLTDITKRKSAEQALSASEQRLEGILGSIQDVVW-SADAVSFATLYLNPTTAMVYGQSLE 707 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN----YNQNFLQGVETEYSLAFILAVLISF 301 V + ++ L L + +Q E L ++ Sbjct: 708 VCYQSQNFWFEQVHPGDRLLLEYHLQLLMEKDQTELEYRIVQPGGKERWLFRRSQLVRDG 767 Query: 302 S---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAG 349 + + + + + H A D LT LPN ++ Sbjct: 768 EHQPLRIDSIDSDITERKLAAEKLHYNANHDSLTNLPNRSMFLDRLGHALQRNLRRRDLR 827 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G ++ I L ++ + L +L G E +++ Sbjct: 828 FAVLFLDLDGFKIINDSLGHSCGDLLLQGIAHRLRQCLRPEDTLARLGGDEFTMLIENIT 887 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + + N + + Q +L ++ Sbjct: 888 CPEDVIAVAQRIHQELQKPFNLNGQEIFTNTSIGIALNHPHYGHPQDVLRDADTAMYRAK 947 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 A + + +++ N +R A+D+ +L L+ QPI + +G + ++ Sbjct: 948 AAGKGR-YAIFNQTMHHHAVQRLQRENDLRRAIDRQELQLHYQPIVCLKTGQLQGVEALV 1006 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLM 580 + G++ P++F+ + + L +L + + + S+N+ Sbjct: 1007 RWQHPEEGLILPEEFVAIAEETGLIVPMGDWILWEASRQILELKQSFPQLSHLQVSINVS 1066 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L + + + + +++PQ + LEITE N + ++ L + +I++D Sbjct: 1067 SRQLRDQRLLKTVDEILSSTNLAPQDLKLEITESLLIDNLNLAADVLKSLRQRNIQISLD 1126 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L R + IK+D FV + N + IV +I LA L V+AE +E Sbjct: 1127 DFGTGYSSLSYLHRFPINTIKVDRSFVNTMEPNNQNTAIVHTIVTLAHTLGLDVIAEGIE 1186 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T++ LH LG QGY RP P D Sbjct: 1187 TERHLTQLHWLGCDAGQGYYFARPIPSED 1215 >UniRef50_C6X941 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X941_METSD Length = 738 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 90/438 (20%), Positives = 182/438 (41%), Gaps = 16/438 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + R + + QA D LT LPN + + + L +D Sbjct: 277 GVARDITERKKAEQAITHQAYHDTLTDLPNRMLFKDRLTVAIHHAKRNKHKLAIMFLDLD 336 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 ++++ G + ++ + L M+E + L ++ G E ++L + Sbjct: 337 RFKWVNDTLGHLYGDELLKQVAARLRNCMREQDTLARMGGDEFTMLLHELNQPDDATVIA 396 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + R ++ + + + + ++++ L+ + Sbjct: 397 QKIFDELKRPFMLDDREIFISSSIGIAIYPDHGDSIENLIKRADIAMYHVKWRGKN-GFQ 455 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGI 532 + ++ K++ L N +R A+++ ++LY QP + +G G + + + G+ Sbjct: 456 YYDPSMNSMFHKKLSLENELRRAIEKRQIVLYYQPKIHLDGHCVIGLEALARWHHPELGL 515 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAG 591 ++P +F+PL + L +LE + ++N+ P + + Sbjct: 516 VSPLEFIPLAEETGLIHALGEMLLEEACVQMRQWQDAGLNNFSLAINISPQLVEEDAFVS 575 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI+ + + +S +EITE + ESS+ +++L G +IA+DDFGT Y++ Sbjct: 576 RILTPIRHHQLSEDLFEIEITENLLMRDVESSISKLKELGSHGIKIALDDFGTCYSSLAY 635 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+R +KID FV DI + + +A I+ +I +A L ++AE VET Q L L Sbjct: 636 LRRFPIHSVKIDKSFVSDISSTSENASIISAIAGIANGFKLDLIAEGVETIPQMHTLQSL 695 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QG+L +P P + Sbjct: 696 GCTKMQGFLFSKPLPAKE 713 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 94/464 (20%), Positives = 175/464 (37%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + QA D LT +PN Sbjct: 598 RKDGESYPEWLTISAVKNEAGQTTNYVSIFHDITELKRQQDALEYQAQHDALTGMPNRIL 657 Query: 340 LEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + +DN + ++ G + + + R L L++ + Sbjct: 658 LGDRLRMALAQLARSGGKLALLFFDLDNFKTINDGLGHGVGDELLVDLSRRLERLLRSGD 717 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 L +L G E L++L E+ H+ + H + + + Sbjct: 718 TLARLGGDEFLILLPEIESVDAASHIATRMLDALKAPFHHGDVEYFVTASIGLTIAPDDG 777 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L+ ++ + + +++ + +R A++ + L+ Sbjct: 778 NEAPKLIKNADMAMYRAKSMGRN-NYQYFTPEMDVAAHRRISMEYKLRKAIEAQEFELFY 836 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP+ + G + ++ +G +++P +F+PL + L VL + Sbjct: 837 QPLVHIQSGHILGAEALIRWR-CEGKLISPAEFIPLAEESALILPLGDWVLRTAAHQAKL 895 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 SVN+ ++A + + + P + EITE + + Sbjct: 896 WQDAGHDLTMSVNISSRQFSGADLAVTLREVLLDTELRPGRLYFEITESMLMGDVSKAET 955 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L + G +DDFGTGY++ LKRL D +KID F+KDI ++ IV +I Sbjct: 956 TLLNLREAGGTFFLDDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITDDSDSRAIVAAIVS 1015 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A+ +L +VAE VETQ Q+ LL +G LQGYL RP P D Sbjct: 1016 MARTLNLRIVAEGVETQAQRGLLASMGPIVLQGYLASRPVPAQD 1059 >UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria RepID=B3PID2_CELJU Length = 844 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 106/581 (18%), Positives = 216/581 (37%), Gaps = 37/581 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 L +++ + R E+ + + ++ Y Sbjct: 246 AQLIASFNQLLDVVELSLAKRRAVELALRKSEEHLRQIIDHLPV-MIGARNIAGYYLFAN 304 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY------------NQNFLQGVET 287 + + + +R N + + T+ +Y + F+ Sbjct: 305 KALANELGYTPEQMRNLHVRQLLKNSVFDIDTMLQNDYRVIRGNEELDVIEERFITASGK 364 Query: 288 EYSLAFILAVLISFSVCLLYMVR-IYHRSEWLNRRWHLQALTDPLTLLPNF--------R 338 + L + L + + +V + + A D LT LPN Sbjct: 365 QLFLQTHIMPLAFYDEKVALIVSVDITERKNAQAKMEFMAHHDALTGLPNRVQLVERLEH 424 Query: 339 ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 L +A + + +D + ++ G + + + L ++E + + +L G Sbjct: 425 ELRRAERHGYYGAVLFIDLDQFKNINDSLGHPVGDKVLEVVATRLQQSVREEDLVARLSG 484 Query: 399 SELLLVLSGPET--------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 E ++VL+ + G + + + S+ +++ L + + + Sbjct: 485 DEFVVVLTVLDQNMETAALRAGEISEKIRSIISQPYVYDSMELRVTCSVGVVVYPDKNNS 544 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL Q +++ E ++ + ++Q+++ + AL++G LY QP Sbjct: 545 VHELLRYADTAMYQVKEKGRD-SIEFFNEEMADKVSRQLVMEGDLHRALEEGQFELYYQP 603 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + +L G+++P F+P++ + VLE K L Sbjct: 604 KMDVISSRVVGAEALLRWKHPTKGMVSPVDFIPVLETSGMIIDVGQWVLEDACKTLVKWS 663 Query: 568 CDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 G + S+N+ P + +I +R+ I P ++ +EITE E ++ Sbjct: 664 EQGLWHEGMKLSINISPRQFRRAAFVQDVIDTIERFPIPPNSLDMEITEGIVIQRVEDAI 723 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L G ++DDFGTGY++ LKRL +KID FV+DI+ + D ++V +I Sbjct: 724 ATMTLLSDKGISFSLDDFGTGYSSISYLKRLPVSTLKIDQGFVRDIIVDRNDRVLVETII 783 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + + +VAE VE +Q A+L G + QGYL P Sbjct: 784 TMGNLLDMELVAEGVEEAEQLAILKAFGCHFYQGYLFSMPV 824 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 95/448 (21%), Positives = 177/448 (39%), Gaps = 28/448 (6%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 ++R + + A DPLT L N ++ + + + + ID+ Sbjct: 243 VMRDVTERRKMEKELLQLAYHDPLTGLLNQHSMRERIARALELPGQHGRMTAILWVDIDH 302 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK------------LYQLPGSELLLVLSG 407 L+ ++ +G + ++ + +L + ++ + ++ G + +++L+ Sbjct: 303 LKRVNATFGHELGDVLLQRVADRMLGCARRTDRKARLGSDQSIKAVARMGGDDFVVLLTE 362 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ++ L S+ + + + + LL Sbjct: 363 ISHVKGAANLAKRLLDDLSQPFVLDRHEVYVTASIGIAVHPHDGAEAGTLLKNADSAMHH 422 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A + + L +R AL + +L + QP + E G + Sbjct: 423 AKAEGRN-NFQFYTSSGKTAALRSLTLEGDLRMALARRELFVEYQPEIDLKTGETVGLET 481 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 ++ G++ P F+PL + L +L A R +VNL Sbjct: 482 LVRWDHPTLGLIPPLDFIPLAEETGLILPIGEWILSIACMQNAIWHKSGLEPIRVAVNLS 541 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 Q+N+ I + + PQ + LEITE NA S+++ +++L G R+A+D Sbjct: 542 GHQFRQRNLIKTIAKTLTNSRLDPQHLELEITESTLMENAASTIHTVKELKSMGVRLAVD 601 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L+R D++KID F++D+ N DA I R+I +A +L V+AE VE Sbjct: 602 DFGTGYSSLSYLRRFPLDVLKIDRSFIRDVTINADDAAITRAIIAMAHNLNLEVIAEGVE 661 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +QQ L + QGY RP A Sbjct: 662 NEQQLQFLQENNCDMAQGYYYCRPLTPA 689 >UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30P04_SULDN Length = 770 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 91/426 (21%), Positives = 177/426 (41%), Gaps = 15/426 (3%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGL 369 + D LT LPN L E + L +D + ++ Y Sbjct: 337 AANELEHLSRHDHLTNLPNKTLLIDRLEHSINVASKNGQKVSILFLDLDRFKEINDTYNH 396 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIH 427 + ++ I R L L++E + + + G E +++L+ ++ + NI++ S + Sbjct: 397 EVGDKLLQDISRRLKKLIKEEDTIGRFGGDEFIIILNNSNETQTVEVVTNIMSAMSEPFN 456 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N L + F + + L+ ++ ++ ++ ++ + Sbjct: 457 VNKVKLHTTFSIGISIFPDDGNSRDILIRNADTAMYEAKSNGKNR-YQFYDKKMTELAFE 515 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L + +R A+ + +Y QP + G + ++ + G++ P KF+P Sbjct: 516 RTTLESNLRKAIQNEEFEVYFQPKIDARVDKVIGLEALIRWNHPELGLIPPVKFIPFAEN 575 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L D ++ + + + S+N+ L N + + I Sbjct: 576 IGLIIEIDRWMMREAAAQVLLWKKENIVCGKLSINVSAKQLEDDNYVEFLSQKINDIGID 635 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + +EITE ++ + + + G I++DDFGTGY++ LKRL D +KID Sbjct: 636 PKDLEIEITEGLIMKHSLHVTSTLNAIRELGISISVDDFGTGYSSLSYLKRLPIDKLKID 695 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FVKD+ + D IV++I LA SL ++AE VET++Q+ L G +QGY + Sbjct: 696 RSFVKDLPHDKDDIAIVKTIIALANNLSLELIAEGVETKEQRDFLLSEGCHNIQGYFYSK 755 Query: 724 PQPLAD 729 P + + Sbjct: 756 PLKVNE 761 >UniRef50_Q2VYM7 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2VYM7_MAGSA Length = 982 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 103/448 (22%), Positives = 178/448 (39%), Gaps = 17/448 (3%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQE 347 A + ++R R +R A D LT LPN A+ +A + Sbjct: 522 ADAKGEDGRFVLLLRDITRKRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRAEQTG 581 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L ++ + ++ YG + +R + R L ++ ++ + +L G E +++L Sbjct: 582 ERLAVLYLDVNRFKDINDSYGHAVGDELLRQVARRLKACVRASDVIGRLGGDEFVMLLPS 641 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 Q N + + L G + + + + LL + Sbjct: 642 VGDHTAAQACANKVLYAFAEPFDMEGLQLFAGTSIGIALYPDDADGAESLLSRADAAMYH 701 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + L + + Q ++V L N +R AL + L QP + G + Sbjct: 702 AKRGG--LPYSCFDIEMDRQVAERVSLENDLRLALGEDQFRLVYQPKVDALSGAIIGAEA 759 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 ++ ++P F+P+ + L D VL + +A P SVNL Sbjct: 760 LIRWRHPVRADVSPGLFIPVAERAGLIGAIDDWVLVEACRQVAEWRAQGLILPSISVNLS 819 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P + ++ + P + LEITE S+ + ++ + QL G R+++D Sbjct: 820 PAQFHDGRLKEKVKAALAGSGLPPSVLELEITETMMASDVDRAIEILGQLTTLGVRVSLD 879 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK +KID FV ++ N D I+ S+ LA SV+AE VE Sbjct: 880 DFGTGYSSLAYLKLFPVSTLKIDRAFVTELPGNAKDGAIIASVIALAGNLGFSVIAEGVE 939 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T++Q A L G +QG+L RP A Sbjct: 940 TREQAAFLAARGCPIMQGFLFSRPVNAA 967 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 99/438 (22%), Positives = 176/438 (40%), Gaps = 16/438 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + E R + A +D LT LPN + E + + +D Sbjct: 311 ALAQEVREREQAQERLNELAYSDSLTHLPNRTLFQDRLHQAMEYAKRHERLIALLFIDLD 370 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + + ++ G ++ I R +++E + L +L G E ++L+ + V Sbjct: 371 DFKRVNDSLGHAAGDRLLQEIARRFGRVLRETDTLARLGGDEFTVILTDIQRPEDAVTFV 430 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L + M + + LL Q+ + D Sbjct: 431 RKLLDTLRAPFMLGEQSITMSASIGITLYPSDDTAEADLLKDADTAMYQAKSRGKN-TFD 489 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY---DEILARLKYDGGI 532 ++ ++ + +R ALD LL+ QPI + G G + ++ G+ Sbjct: 490 FYAPELTQSVRARLTMEGDLRAALDTNQFLLHYQPIVSLNGAGVQGLEALVRWQHPVRGL 549 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAG 591 + PD+F+P+ L V+++ LA ++NL P+ + + Sbjct: 550 VPPDEFIPVAEDSGLIHEIGDWVIDAACAQLAQWDARGLSHLTLAINLSPVQFRRDGLVS 609 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI R +++ I+ + + LEITE ++ L G + IDDFGTGY+ Sbjct: 610 RIARRLRQHSIASERLHLEITESLLMEQNRHVAETLQTLDAMGIGLCIDDFGTGYSALNY 669 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+ +K+D FV+D++ +VR+I +A A L VVAE VE + Q LL ++ Sbjct: 670 LRHFPIRQLKVDRSFVEDMLHAEDTRALVRAIVLMAHALRLEVVAEGVEEKSQLELLREM 729 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGYL+ RP P A+ Sbjct: 730 GCDQVQGYLLSRPLPAAE 747 >UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5L4_9RHOB Length = 854 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 97/463 (20%), Positives = 181/463 (39%), Gaps = 25/463 (5%) Query: 290 SLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--- 343 SL F L+ + ++ R+ A D LT LPN Sbjct: 377 SLWFTLSPVMSDKGLPTSMIGTFYDVSDRRKAERQIKRLAFYDQLTGLPNRHLATDRTIQ 436 Query: 344 -----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + + +D + ++ G + ++++ + + + + + G Sbjct: 437 AMRTNAQSGEFGALLFIDLDQFKRLNDTLGHDVGDKLLKAVADRISRRLGGDSTVARFGG 496 Query: 399 SELLLVLSGPET---------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 E +++L +T +V + + + F E Sbjct: 497 DEFVVLLPTLKTVIERDAALLAEHAAELVLRIFKQPFQLEGYEHNCSTSIGIALFSAPLE 556 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 T +L + ++ + + + + ++V L +RTA+D+G+ + Q Sbjct: 557 TFDDILKRADIAMYEAKGAGGNV-IRFFDPEMQRVVREEVSLDADLRTAVDRGEFEFHLQ 615 Query: 510 PIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 P N G + +L G+++P F+P+ + L VL+ K L+ Sbjct: 616 PQINRFGTVVGAEVLLRWPHPVRGLVSPGVFIPIAEKSGLIVPLGNWVLDCAAKVLSNWA 675 Query: 568 CD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 S+N+ L ++ ++ +R+ P+ + LEITE +N + ++ Sbjct: 676 AKELFSDINLSINVSANQLHSEDFVETVLGAIERHGARPRRLKLEITESLLVNNLDDAIR 735 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L + ++DDFGTGY++ LK+L D +KID FV D+ N DA I I Sbjct: 736 KMTALQQHEILFSLDDFGTGYSSLSYLKQLPLDQLKIDRSFVSDLPQNKNDAAIAEMIVA 795 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L + L V+AE VET++Q+ L +G QGYL G P PL Sbjct: 796 LGRTLGLHVIAEGVETEEQKGFLEGIGCDQFQGYLFGVPMPLD 838 >UniRef50_C5V1X8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1X8_9PROT Length = 714 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 104/435 (23%), Positives = 192/435 (44%), Gaps = 20/435 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 ++ + A D LT LPN L + + + +D + ++ Sbjct: 272 ELRQAAKKINELAFFDQLTGLPNRVLLLDRLKQAMSASTQNRCHIALLLIDLDKFKTINE 331 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNI 420 G M ++ + L ++ + + +L G E +++ + T +++ Sbjct: 332 TLGHDMGDQLLKQVAERLSHCVRSGDTVARLGGDEFVVMSANLNTHEALAATQAENIGEK 391 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + R H++ F G Q ++ LL Q +S AL Sbjct: 392 ILAALNRTYHFDAIPHHSTPSIGVTLFCGEQTDVEILLKQAELAMYKSKEAGRN-ALHFF 450 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKEGEGYDEILARLKYDGGIMTPD 536 ++ + + T+ + N +R A+ Q +L+ QP +++ G + ++ K DG +++P Sbjct: 451 DQDMETKVTRYANMENDLRVAVQQQQFILHYQPQIADQQLTGVEALVRWQKPDGSMVSPA 510 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRII 594 F+P+ + L L VLE+ + LA ++ +VN+ Q + +++ Sbjct: 511 DFIPMAEETGLILPLGLWVLETACRQLAIWANQPERAHLTIAVNVSAHQFRQADFVDQVL 570 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + K +P + LE+TE +N E + + L G ++DDFGTGY++ LKR Sbjct: 571 EVIKNSGANPHRLKLELTESLLLTNVEEIIEKMIALKLTGVSFSLDDFGTGYSSLSYLKR 630 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +KID FV+D++ + DA I R+I LA++ SL V+AE VET+ Q+A L Sbjct: 631 LPLDQLKIDQSFVRDVLIDPNDAAIARTIITLAQSLSLGVIAEGVETEAQRAFLASADCH 690 Query: 715 YLQGYLIGRPQPLAD 729 QGYL +P + D Sbjct: 691 AYQGYLFSKPLRIDD 705 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 165/443 (37%), Gaps = 18/443 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKS 351 + +L + R R H A D LT LPN E Sbjct: 493 GQVIGVLAVERDITELMEYRERIHYLAYYDALTGLPNRTLFADRVNQVLADASWHEQRFG 552 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + ++ + L ++ + + +L G E ++L Sbjct: 553 LMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYDTIARLSGDEFAILLPELRNP 612 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 L + +N ++ ++ L + + + + L + + Sbjct: 613 DDLATIARKINDEIAKPFLIHDKELFISTSIGIAIYPDDGDDRATLFKSADVAMYHAKNY 672 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + + ++ ++L +IR AL + L+ QP + E G + +L Sbjct: 673 GRN-NYQFYSRELGSKASEYIMLGASIRQALKNAEFELFYQPQVDLMSGEIVGAEALLRW 731 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW---LATHPCDKKGPRFSVNLMPL 582 G++ PD+F+ + + L VL L + D +VNL Sbjct: 732 RNPQLGVVMPDRFIKVAEESGLIVEIGEWVLREACSAVVCLNRYRPDDHPLSMAVNLSSR 791 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L ++ + + P+ + LEITE +++ + + + G I+IDDF Sbjct: 792 QFLYNDLLASVKDILAETGCKPEWLKLEITESLLLEDSQEIISTLSTFKEMGITISIDDF 851 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 TGY+ L + +KID FV+DI ++ +I +A A L +VAE VE++ Sbjct: 852 CTGYSAMSYLGQFPISQVKIDRSFVRDIAAKQDKLELITAIIRIAHALRLELVAEGVESK 911 Query: 703 QQQALLHKLGVQYLQGYLIGRPQ 725 QQ LL G QGY G+P Sbjct: 912 QQANLLKIQGCTIAQGYFFGKPM 934 >UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNA1_9PROT Length = 650 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 112/569 (19%), Positives = 224/569 (39%), Gaps = 30/569 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 +V + +RR + L + + LS+ L AG L Sbjct: 75 SLVDLVDINSWLSKYRRCM--FLSGLAFGLMIFFFDNLSIEYHFLILCISVGLSAGGLYT 132 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + L W V + L V Y+L+ +F + Sbjct: 133 LGESFSIYAFYVITMLGSALVWIVQQDADVYRIGTILIIVAIYYNLSSGRRYANNFKQII 192 Query: 306 L---YMVRIYHRSEWLNRRW-------HLQALTDPLTLLPNFRALEQAP--------EQE 347 L + + E + QA D LT LPN + Sbjct: 193 LEQHSVSEYIKKQEEMQNELLEQKDILEHQATHDALTGLPNRILFNDRLEQSIQKAKRND 252 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +D+ + ++ G + ++ + L +++ + L +L G E +++ Sbjct: 253 TQIALFFIDLDHFKEINDSLGHHIGDEVLKVVATRLNLVIRLEDTLARLGGDEFTIIMED 312 Query: 408 PETEGRL----QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + Q ++ +L I NN L + F + L LL Sbjct: 313 IKNIQYVIFFSQKILKVLLE-PISVNNQNLYLSSSIGISLFPQDSTDLNNLLKYADTAMY 371 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 ++ + + ++ ++V+++ +++ A+ + + +++ QP + + G + Sbjct: 372 KAKSEGRN-NFQFYSKEMTELAFERVIMVASLKQAIIKKEFVVHYQPQIDAKNKKLVGME 430 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNL 579 ++ G+++P KF+PL L D+ V+E + ++ D P S+NL Sbjct: 431 ALVRWEHPTLGLVSPAKFIPLAEDTGLIVDIDILVMEIAMMQVSEWRRDGLNPGILSLNL 490 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L + +Y + + LEITE + + ++++ + G +IAI Sbjct: 491 AIKQLNHDTFIIILKHNMSKYDFKSEWLELEITENDVMRKPKDAAVKLKEISELGIKIAI 550 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK+L D +KID F++DI + D IV+++ ++K+ +L V+AE V Sbjct: 551 DDFGTGYSSLSYLKKLPIDKLKIDQSFIRDIPGSEDDNAIVKAVIAISKSLNLDVIAEGV 610 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET++Q+ + + G +QGY RP P Sbjct: 611 ETKEQRDFVLENGCSKIQGYYYSRPLPAE 639 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 99/572 (17%), Positives = 192/572 (33%), Gaps = 33/572 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV------LLLLLCTPYENDFIAG 241 ++I +R E+R + A + + +P I Sbjct: 243 QLIRCYLTDITERKRSELALRISEERYALAAEAANDGLWDWHIGNRSVYYSPRWELLIGE 302 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL-----NYNQNFLQGVETEYSLAFILA 296 + I L + + + + Sbjct: 303 PPGSLQPTIEEWWRRVHPDDLEQLRQNIKEHLFGSRPCFDCEFRIRHRDGSYRWMRSRGK 362 Query: 297 VLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQE 347 L + + + + + AL D +T L N L Q Sbjct: 363 ALRNQKGQPYRMGGSMTDVTEYHLIQEKILHDALHDAMTGLANRVLLIDRLTQAIARRQR 422 Query: 348 AG---KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D + ++ G + + I + L + + + +L G E ++ Sbjct: 423 RPNSLFAVLFLDVDRFKVINDSLGHLAGDQLLIGIGQRLRACTRPEDTIARLGGDEFAIL 482 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + + + R + + +T + LL Sbjct: 483 LEDLSDPAQAMKVAERILMVLGRPFLLEGHEIFTTASIGIAFPWEDSQTAEDLLRDADTA 542 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEG 518 ++ + + + QT + + +R A ++ + L+Y QPI + + G Sbjct: 543 MYRAKSLGKAR-YEVFSMTMRAQTIALMQMETELRRAAEREEFLVYYQPIVDLATLKMVG 601 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRF 575 ++ +L + GI++P +F+ + + L V+ + + + R Sbjct: 602 FETLLRWQHPERGIISPGEFMAVAEETGLILPISWWVMAEACRQMQRWAVIFPRSRKLRI 661 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 VNL Q ++ + + Q + LE+TE N E ++ +E++ G Sbjct: 662 GVNLSGRHFQQADLLPNLRSILAETGFPAQRLCLEVTEGILIDNKEVAIATLEEIRAMGI 721 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +++DDFGTGY++ L R D +KID F+ + + A IV +I LA + L VV Sbjct: 722 GVSMDDFGTGYSSLSYLHRFPIDTLKIDRTFISALNSEESSATIVHAILMLAHSLRLQVV 781 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 AE +ET++Q L LG Y QGY RP Sbjct: 782 AEGIETREQYRALQALGCNYGQGYFFARPLSA 813 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 93/446 (20%), Positives = 192/446 (43%), Gaps = 16/446 (3%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 + + + + + + + D LT +PN + + + Sbjct: 136 VAGNPTHYVAIFSDVTQHKRTMEQLARLSNYDLLTNVPNRQLFTKRLQHLLDTARRYNQQ 195 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D ++++ G ++ + L L++ + L ++ G E +++L + Sbjct: 196 LAILFLDLDRFKYINDELGHYSGDILLQKVANRLKKLLRTKDTLARIGGDEFVVILPKLK 255 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + ++ + + + + + + LL + +++ Sbjct: 256 DIQEAVSIAEQIIESLQAPFLLHHKDIYISASIGISVYPNDGDDGEMLLRRADRAMQKAK 315 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 + + Q+ + V L N +R A+++ +L + QPI N K+ E + ++ Sbjct: 316 ESGRNR-FELYTAKLDYQS-EVVTLENYLRKAIERNELFVCYQPIVNIKTKKIEALEALM 373 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 + + G ++P +F+PL + L + E + + +N+ + Sbjct: 374 RWKQPNIGFVSPAQFIPLAEETGLIVPMTKWLFEQACVHIKAIHQFAPHVKIGINISAVH 433 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q + ++ + K++ + P+ LE+TE NAE S+ + QL + GF++AIDDFG Sbjct: 434 FQQDDFVQQLSTIVKKHDVHPRFFKLELTESTIMPNAEESVQKLVQLKQCGFKLAIDDFG 493 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TG+++ L R DI+KID F++ + + DA IV +I +A LSVVAE VET+Q Sbjct: 494 TGFSSLSYLHRFPIDILKIDQSFIRRLSLYSDDATIVSTIIMMAHHLHLSVVAEGVETEQ 553 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L+K QGY I +P P+ + Sbjct: 554 QYEFLNKQQCDMAQGYYIAKPMPIDE 579 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 97/460 (21%), Positives = 174/460 (37%), Gaps = 19/460 (4%) Query: 284 GVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 S+ +A + + + + +R H A D LT LPN L Sbjct: 424 KDGRIISVRESIAAVHDPAGAVAYYIGIFHDITEQKASAQRIHQLAYYDVLTGLPNRALL 483 Query: 341 EQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + L +D + ++ G + +R++ + L +++++ Sbjct: 484 MDRCQHELARAMRDGKRLAVLFLDLDRFKHINDSLGHPVGDGLLRAVAQRLQGTLRDSDT 543 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E +++L ET ++ + L +G F + Sbjct: 544 IARLGGDEFIVLLEHVETSAGVELAARRILDAFRDPFQLEEHRLSVGASVGISLFPDHAS 603 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L Q+ A E + ++ L +R AL++ L L Q Sbjct: 604 DITSLFKYADLALYQAKAAGRGD-FRFFEPRFNDAAKDRMRLERELRQALERNQLSLQYQ 662 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P+ + G + +L G ++P F+P+ L VLE + Sbjct: 663 PVFALPDGRLAGAEALLRWTHPALGSVSPATFIPIAEDSGLIVPIGAWVLEQACRQARQW 722 Query: 567 PCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 P +VNL + + + ++ + + R + + LEI+E +AES + Sbjct: 723 LDAGLDPGVIAVNLSGMQIQRNDLVDTVSSVLARTGLPACHLELEISESYITRHAESDLQ 782 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + QL G +AIDDFGTG + L+RL +KID F+ DI + A + R+I Sbjct: 783 RLGQLRALGVSMAIDDFGTGQTSLGHLRRLPVSKLKIDRSFMADIEHDAAAAAVTRAIIG 842 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 L L+VVAE VE+ Q++ L +QG+ RP Sbjct: 843 LGHGLGLTVVAEGVESAAQESALVAQHCDLVQGFRYARPL 882 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 96/458 (20%), Positives = 187/458 (40%), Gaps = 16/458 (3%) Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--- 339 + T + ++ + + + + + + A DPLT LPN Sbjct: 320 RKSGTVFPELLTISKIDGPDGGFMAIFTDISQLKETEEQLQKLAHYDPLTNLPNRFLVNE 379 Query: 340 -----LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + +A + + L ID+ + ++ G +++ L L+++++ + Sbjct: 380 CLEHSIRRAQRRSDHLAVFFLDIDSFKNINDSLGHFAGDKLLKTTANRLKALLRDDDSVG 439 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E L+VL T H+ + + + + + + + +T Sbjct: 440 RIGGDEFLMVLDDISTPDDATHIAEKIIGALRKPMILEGRSISVSASIGISIYPEDGQTA 499 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ + E ++ Q + VL+ + +R A+ + + L QP Sbjct: 500 ETLMSNADAAMYNAKDQGRD-TFRFYSEHLTRQAFQNVLIDSALREAVSRQEFRLAFQPQ 558 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 N G + +L G ++P +F+P + L VLE + Sbjct: 559 VNTDNGSLLGLEVLLRWHHLTLGTVSPSQFIPQAERTGLIRDIGHWVLEQSCLQGSRWIA 618 Query: 569 DKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + +VN+ ++ ++ ++ P+ + LE+TE + E + N+ Sbjct: 619 EGLQFGHLAVNVSAPQFRAEDFVAQVRKVLADTEFPPEKLELELTESVLVHDTEKLIENM 678 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G AIDDFGTGY++ LKR+ D +K+D FV IV++ D +I ++ L Sbjct: 679 HELRALGVMFAIDDFGTGYSSLSYLKRMPIDRLKLDKSFVDHIVSDDSDRIIAGAVLALG 738 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 KA L V+AE +E + Q +L LG ++ QGYL GRP Sbjct: 739 KAMGLPVIAEGIEQEAQARVLQSLGCKHFQGYLYGRPM 776 >UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclassified Gammaproteobacteria RepID=A4ABI7_9GAMM Length = 654 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 123/581 (21%), Positives = 225/581 (38%), Gaps = 32/581 (5%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 L + R+ + + ++ A + + L+ L+ + Sbjct: 62 AATLTIAIYRISSTLRYKKMSEEAREASARRWYREMMLGVLLSGLAWGAAGYLLYDPRNM 121 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + L+ G F+ + LL + L +E L ++AVL Sbjct: 122 LNQSLLAFVIAGMCAGSIVSLSAFIEASATFLATSLLPFTLRLLVEGSSETGLMAVMAVL 181 Query: 299 ---------ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 ++ ++ + + + QAL D LT LPN R L+ Sbjct: 182 YLIMMTAFARRVNLTVIGGLEMTYLRSKAEDTIERQALFDELTGLPNRRLLQDRLGQALA 241 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + L +D + ++ G + I R L ++E + +L G E Sbjct: 242 RAKRNNTQAALMFLDLDFFKRVNDSLGHSAGDELLVEIGRRLSDFLREADTAARLGGDEF 301 Query: 402 LLVLSGPE--TEGRLQHMVNI------LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 +L+L+ E +E + + I+ + + + + Sbjct: 302 VLLLTDIEGGSEHVVSVVRRRGETLRQAVEAPINIKGNEVHITVSIGVSLLPDDTNDVDD 361 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD-LLLYAQPIR 512 LL ++ L + ++++ + +R ALD + L LY QP Sbjct: 362 LLKHADTAMYRAKDDGRN-TLRFFVPEMQASLSQRMDMERQLRGALDADEGLELYLQPQY 420 Query: 513 NKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 E G + ++ Y+G + PD F+P+ L R V+E+ + A + Sbjct: 421 TDEEAICGAELLIRWQ-YEGSFVPPDVFIPVAEDSGLIYRLGDWVIENACRIGAGLKDEL 479 Query: 571 KG--PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + ++N+ P QKN + +I +R+ + + LE+TE + + ++ + Sbjct: 480 RDREFSLAINVSPRQFRQKNFSEKIFEAMERHELPRGLIELELTEGLLIEDVDDTVSKML 539 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L + G R +IDDFGTGY++ LK L D +K+D FV+D++T+ DA IVR+I +A+ Sbjct: 540 SLREQGVRFSIDDFGTGYSSLRYLKSLPLDTLKVDQSFVRDVLTDPGDASIVRAIVSMAR 599 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET++ + L QGYL RP PL D Sbjct: 600 TLELEVIAEGVETKEVRDFLISANCLRFQGYLYSRPLPLDD 640 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 87/464 (18%), Positives = 163/464 (35%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + + A DPLT L N Sbjct: 602 RKDGEIYPEWLTISSIAGPNGEASHFVAVFSDITAQKRSEQEIDFLANHDPLTGLANRNL 661 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 E + +D ++ G +R R L +++++ Sbjct: 662 FEDRLAHAISMAGRNGQHVGLLLVDLDRFRLINDGMGHGPGDALLRETGRRLGHCVRDSD 721 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L G + + L F + Sbjct: 722 TVARLGGDEFGIILEGLADAADAGMQAERILEAMRAPLRLGGQELFCTVSIGIAVFPADG 781 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL + ++ ++ + +R AL++ +L L+ Sbjct: 782 TDAATLLRHADTAMALAKREGRN-NFQFYTHALTEAVFSRLNIETGLRHALERDELRLHY 840 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + + ++ + G+++P F+P+ Q +L L S + Sbjct: 841 QPILDAASGRIAAMESLMRWQHPERGLVSPGVFIPVAEQSDLILALGRWALVSACAQVRA 900 Query: 566 HPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 SVN+ Q ++ + + + PQ++I+E+TE + Sbjct: 901 WSDAGLEPVPVSVNIPACHFRQPGFVEEVLGVVRETGVQPQSLIIELTESALMEPVSLAE 960 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 I +L G +AIDDFGTGY++ L+R + +K+D FV + + I ++ Sbjct: 961 ERIRRLRDTGVVVAIDDFGTGYSSLGYLQRFHVNYLKVDRSFVSGLPGDENARAITEAVI 1020 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + L VVAE VETQ Q L G +QGYL GRP Sbjct: 1021 GVSHSLGLQVVAEGVETQAQLDHLRATGCDKVQGYLTGRPVTAE 1064 >UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JTT5_BURVG Length = 884 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 111/557 (19%), Positives = 209/557 (37%), Gaps = 21/557 (3%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R + R + R + A LL + +V + Sbjct: 326 RTAAIEESERRFDRVLQELTDAVYVRDRDGRIVVANRKFGLLFGAEDTRSLVGKNIVELL 385 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 V ++ LN A +L + + + +E +S AV IS +L Sbjct: 386 AHTTKQMVAEVNNRVLNSHGAPMSLEIETTTHSAVLPIEYTFS-----AVDISGQSHVLC 440 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 +R + QA D +T LPN R G + + +D+ Sbjct: 441 QMRDVTTRRQYEAQLVKQATFDEITGLPNRRLYIDRLSNALHRSKRDGTGCAVMFIDLDH 500 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + + L L++ + + + G E +L++S + + Sbjct: 501 FKRVNDTLGHPFGDQLLIAAAQRLSGLLRPGDTVARFGGDEFVLLMSDFTDPMECRIVAE 560 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + + +G F G+ LL ++ + Sbjct: 561 GIVEAFAAPFEVAARSISVGASVGVSVFPGDGTEPDILLQHADTAMYEAKSAGR-SGFCF 619 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 ++ + + + IR+AL + ++ + QPI + +E + + D G + Sbjct: 620 FNHDMNARVHDMLRIDARIRSALARNEISVLYQPIIDPVTREIVKAEALARWHSEDLGHV 679 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGR 592 PDKF+P+ + L A+ VL+ A + SVN+ Sbjct: 680 PPDKFIPVAEENGLIAQIGDWVLQEACMNAAKWSKELASPITVSVNVSAKQFDDPTFVDS 739 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + + LEITE S+ E+++ I L + G +++DDFGTGY++ L Sbjct: 740 VFAALETSKLPAHLLELEITERVLISDDETALETISALREIGVGLSLDDFGTGYSSLSYL 799 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + + IKID FV+D+ + + R+I +AK+ L ++AE VETQ+Q L G Sbjct: 800 TKFPLNTIKIDRAFVRDLDHDEQTQNLTRAIIAMAKSLDLKLIAEGVETQEQADKLVLYG 859 Query: 713 VQYLQGYLIGRPQPLAD 729 +YLQG+ GRP ++ Sbjct: 860 CEYLQGFYFGRPMTSSE 876 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 98/490 (20%), Positives = 184/490 (37%), Gaps = 23/490 (4%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 PF + + +L + ++ + Y + + ++ R L Sbjct: 268 PFETVRRTQQPVRILQHRRDKED-TLSIYEIEASPLINNGQFDGMVSTARNITDRLRLEA 326 Query: 321 -------RWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRH 366 R + D LT LPN Q + +D ++ Sbjct: 327 SLDEKESRLLYMSNHDLLTNLPNRVLFRNRLNQAIARNHEGNHVVLLFIGLDRFTKINES 386 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G + + + + EN+ L +L G E +++ L + Sbjct: 387 LGREIGDNTLTQAAERFHNCLAENQILARLGGDEFAVIMEDCRHPQDAAKTAKKLLEQLI 446 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 IH + + + + E+ + L+ ++ + E ++ Sbjct: 447 EPIHVQPNEIYLTASIGISSYPQDGESPKTLMSHADIAMTRAKSEGKDR-YQFFEREMTQ 505 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 T + L N +R A+ + +L +Y QP +++ G + ++ G+++P F+P Sbjct: 506 TTKRVFELENDLRKAVARNELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPADFIP 565 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L VL + +A +VNL PL K + + + K Sbjct: 566 LAEETGLIVSIGEWVLRQACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAKTLKE 625 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 I+P + LE+TE + + S + +L + G +AIDDFGTGY++ L+ Sbjct: 626 TGINPACLELEVTESMIMDSIDKSTATMIELTELGAGLAIDDFGTGYSSLSYLRYFPLTK 685 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F++ + ++ DA + S+ LA + +L VVAE +E + Q L K QG+ Sbjct: 686 LKIDKSFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQGF 745 Query: 720 LIGRPQPLAD 729 L RP P D Sbjct: 746 LFSRPVPAED 755 >UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9A3_KANKD Length = 1515 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 87/463 (18%), Positives = 179/463 (38%), Gaps = 19/463 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + V+ + + + R A D LT L N + Sbjct: 1030 RKDGDTYPIEINIDVVRDNDGEIINYVGVFSDITFRKQAERELRRLATVDQLTDLKNRTS 1089 Query: 340 LEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE-NE 391 E + + +DN + ++ G + + + + L ++ + N Sbjct: 1090 FRTLFEHLIEDSGRGDQHALLFIDLDNFKRINDSLGHGIGDELLIYVAKILQEIVSDQNG 1149 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L +T + + + ++ + + + + + N Sbjct: 1150 VVARLGGDEFTVLLQEVDTWNKPAKIAQAILDEFAKSLPLSTAEVVVSPSIGIVMYPENG 1209 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + + LL + ++ Q ++ L + +R A+++ + +++ Sbjct: 1210 TSAEELLKNADTAMYYAKKKGKN-TYQFYTRQMNEQAKLRITLESELRQAIEKDEFVMFY 1268 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + ++ G++ P +F+PL + +V+E + Sbjct: 1269 QPKVSLQTGKITGMEALVRWRNPRRGLVLPGEFIPLAEEAGFIIPISQRVIEKTCLQIRD 1328 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VNL + +N+ + I P A+ EITE + S+ Sbjct: 1329 WQNRGIFHGKVAVNLSAVQFYHENLWETVKNALHLAKIEPDALEFEITEGMVMEDLAQSL 1388 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L + G +A+DDFG GY++ LK D +KID FV D+ + D +V SI Sbjct: 1389 QQMRTLREMGISLALDDFGVGYSSLGNLKDFPIDTLKIDRTFVWDLEDSDRDRNLVASIV 1448 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 LA + VVAE VE + Q L ++G + +QG++ RP P Sbjct: 1449 TLAHNLDIKVVAEGVENRNQVDALREMGCEEIQGFIFSRPVPP 1491 >UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='Nostoc azollae' 0708 RepID=B9YGE9_ANAAZ Length = 637 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 93/439 (21%), Positives = 180/439 (41%), Gaps = 16/439 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAP---EQEAGKSFCCLRID 358 +++ R + + + ++L D LT LPN L+ A C L +D Sbjct: 180 VWIFRDITAEKLASNIINYESLHDILTNLPNRLLLKNLLIDALTKVSHNHSLGVCFLDLD 239 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + ++ + + + ++ ++ + + G E +++L + + Sbjct: 240 RFKKINDSLGHGIGDKLLQMVAQCIKKSLRSDDIVARWGGDEFIILLPEISEMYNIDLIQ 299 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + +N L++ + + E + L+ Sbjct: 300 ERIFAAFKQGFKIDNYHLNISPSIGIALYPQHGEDGETLIKNAEAALSFVKLQGRN-NYK 358 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + ++ Q T+ +L N++ AL++ + +Y QP N E + +L + G+ Sbjct: 359 VYQAAINSQATELFILENSLYNALERQEFKVYYQPQVNSSTGEITKMEALLRWQHPELGL 418 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIA 590 + P F+P+ + L VL++ + +VN Q N+ Sbjct: 419 IPPATFIPIAEETGLILPISEWVLKTACLQNKAWQQTLNLSSLSVAVNFSGRQFQQPNLV 478 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 G + ++ ++ + + LEITE A + E + + QL + G I+IDDFGTGY++ Sbjct: 479 GIVEQVLCETKLAHRYLELEITETVAMQDVELTQKILRQLDEMGVTISIDDFGTGYSSLS 538 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK +KID FV+D+ I +I LA +LSVVAE VETQ+Q L Sbjct: 539 YLKDFSIHALKIDQSFVQDLANKDHQTAITTAIISLAHGLNLSVVAEGVETQEQLNALRI 598 Query: 711 LGVQYLQGYLIGRPQPLAD 729 L + +QGY P + Sbjct: 599 LQCEIMQGYFFSHPLSAEE 617 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 107/558 (19%), Positives = 212/558 (37%), Gaps = 36/558 (6%) Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---- 261 L + + L L + +D + + + + + +G G+L P Sbjct: 60 QWLNHRGHHEAAAGMVLSVATLSLFSIMWFSDGLRDSSL-LGYPVILIGAGQLLKPRHFW 118 Query: 262 --FLNLTWAVSTLCLLNYN---QNFLQGVETEYSLAFILAVLISFSV----------CLL 306 + V L L N G E + + +LI+ + L+ Sbjct: 119 MLLTFMLGCVVMLGLGTLNGWRTGITSGTELDRLTDSVSILLINGFLIWFLTYDMQNALV 178 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNF----RALEQAPE----QEAGKSFCCLRID 358 + R + A D LT LPN L +A ++ + + +D Sbjct: 179 RLRAQIARFHASEKNLTYLAQHDGLTRLPNRILGNELLTEAMRVAAEEKNLVAMLFVDLD 238 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 N + ++ G + + + L +++++ + + G E L+ L+G + + + Sbjct: 239 NFKDVNDSLGHSAGDDFLVQVAQRLRESVRQSDIVCRQGGDEFLIGLTGLQHPDAVAKVS 298 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + + + L+ + Sbjct: 299 QDILQKMQAPFQLRGIEVLASCSIGIALYPQHGNSFDELMRHADLAMYHAKEAGRN-TFR 357 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 E + T+ + L++++R A+ Q + +L+ QP+ + G + ++ G+ Sbjct: 358 FFSEDIRSSVTESLHLISSLRQAVTQEEFVLHYQPVYDLHSGRLLGAEALVRWQNPKLGM 417 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAG 591 ++P F+ L + L VL + + SVNL P+ + N+ Sbjct: 418 VSPGLFITLAEKSGLIVDIGQWVLTEACRQMQAWRQQGATDLFVSVNLSPVQFSRGNVEA 477 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I + + + P+ + LE+TE + E + + ++ G R++IDDFGTGY+N Sbjct: 478 VIAQALRETGLDPRQLELEVTESTLIHDTEKFITTLGRIQHSGIRMSIDDFGTGYSNLSY 537 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+R +KID FV+ ++ D +V +I LAK+ L+V AE VE + + L ++ Sbjct: 538 LQRFPVHKLKIDQSFVRRLMQGQKDVAMVSAIIHLAKSLQLTVTAEGVENEATREALTRM 597 Query: 712 GVQYLQGYLIGRPQPLAD 729 G QGYL RP P D Sbjct: 598 GCDQAQGYLFARPMPAKD 615 >UniRef50_B2J301 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=8 Tax=cellular organisms RepID=B2J301_NOSP7 Length = 824 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 91/463 (19%), Positives = 184/463 (39%), Gaps = 20/463 (4%) Query: 282 LQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + Y + + SV + + R + + A D LT LPN Sbjct: 345 IAAQTRHYHTRLVPELASDESVYFVLSISRNITALKLAEAQLIHDAFHDILTSLPNRALF 404 Query: 341 EQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + E+ + L +D + ++ G M+ + ++ R L ++ + Sbjct: 405 MERLERALMLAKRRADYTFAVLFLDLDRFKVVNDSLGHMIGDQLLTALARRLENCVRAGD 464 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L +V ++ + + G+ Sbjct: 465 TVARLGGDEFTILLDDINNINDAIGVVERIHEALTSAFTLSGYEVFTTVSIGIVVSKGSY 524 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + +L ++ A + + + Q TK + L +R A+++ + +Y Sbjct: 525 NLPEQILRDADIAMYRAKALGKAR-HEIFDSTMYTQITKLLELEMDLRRAVERQEFQVYY 583 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + G++ ++ G++ P+ F+P+ + L VL + + Sbjct: 584 QPIVLLETCKIIGFEALVRWQHPQHGLVPPESFIPIAEETGLIIPLGYWVLGEACRQMRA 643 Query: 566 HPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 SVNL LQ ++ +I ++ + + + LEITE N +S Sbjct: 644 WQIQFPTDPPLTISVNLSTKQFLQPDLIEQINQIMQETALEASNLKLEITESVLMENIQS 703 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + + QL + ++ +DDFG GY++ L R + +KID F+ I N + IV++ Sbjct: 704 ATFMLLQLQQMNIQLHLDDFGIGYSSLSYLHRFPSHALKIDRSFITKIGANGENLEIVQA 763 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I LA++ ++ V+AE +ET +Q + L + +Y QGY +P Sbjct: 764 IITLAESLNIDVIAEGIETVEQLSQLRAMKCKYAQGYFFSQPL 806 Score = 42.7 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 25/92 (27%), Gaps = 4/92 (4%) Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 +D VF I + P + + T+ L + E + + Sbjct: 172 SDAFGKEATEVFNIAHEETRIIIESPITQVLQSGITVGLPEQTI-LITKNGAEIPIDDSI 230 Query: 296 AVLISFSVCL---LYMVRIYHRSEWLNRRWHL 324 A + + + + + + + + Sbjct: 231 AAIKDDNGNITGAVLVFQDITERKQILAALAR 262 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 87/463 (18%), Positives = 177/463 (38%), Gaps = 19/463 (4%) Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + ++ L S + + + ++ A D LT LPN Sbjct: 545 ANGEPLPIWLSISALSSTKTEQSSYVAVFSDISELKEAEQKLEKLAHYDNLTSLPNRTLF 604 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + ID + ++ ++G + R + ++ + Sbjct: 605 YDRIESSLARAARNGKKTALLFVDIDRFKQVNDNHGHHTGDQLLVEAARRISAHIRLGDT 664 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++LS + +Q + + ++ + + + Sbjct: 665 VARLGGDEFTVILSELDGLDPVQDIARRIQKSLRDPFRLDDKEIFSSASIGIAMYPDDGR 724 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL L ++ ++ Q + L + ++TA++ L + Q Sbjct: 725 NAESLLKHADVAMYHVKERGRNDIL-FFDKAINEQAEARAQLEDNLKTAINTQQLFMVYQ 783 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P N E + ++ + G ++P F+PL L VL + Sbjct: 784 PRFNISGTEILSAEALIRWKHPEQGFISPGDFIPLAESCGLIVELGRWVLMQACQAAQEW 843 Query: 567 PCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + + SVNL L ++ I + + P + LEITE + E+ + Sbjct: 844 NENTGQNTPVSVNLSARQLHDSSLLIDIENALNQTGLDPSLLELEITETMVIQDMETVIS 903 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +E + G R+++DDFGTGY++ LKRL +KID F+ D+ ++ +V+++ Sbjct: 904 RLEAIRTIGVRLSVDDFGTGYSSLIYLKRLPVSTVKIDKSFIDDVPGSSGSENLVKAVIS 963 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + +L+VVAE VET+ Q + L + +QGYL+ +P Sbjct: 964 MSHSLALNVVAEGVETEAQLSFLTENHCDEIQGYLLAKPDSAE 1006 >UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococcus capsulatus RepID=Q60BK5_METCA Length = 594 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 91/428 (21%), Positives = 168/428 (39%), Gaps = 16/428 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + A DPLT LPN L + + +D + ++ G Sbjct: 157 RKQNHLYHLAHYDPLTSLPNRLLLNDRLKRACLRGQRGGYRIALLFIDLDRFKLVNDTLG 216 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 ++ + +++ + + +L G E ++L + + L R Sbjct: 217 HAAGDQLLQGVAGRFAACVRKVDTVARLGGDEFTVLLEPVQGPDEALAVAAKLAQSLERP 276 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 N + F + T++ L+ + + E ++ Sbjct: 277 FLIQNHEITTSASIGVVLFPEHDATVEGLMRKADAAMYCAKREGRNR-FALFTEEMNSTV 335 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++V L + + AL++G+ + QP + G + +L G + P KF+P+ Sbjct: 336 VERVTLESYLNAALEKGEFCCHFQPQMATADDRIVGVEALLRWTNPVLGRVPPLKFIPVA 395 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L L LE+ R +VN+ PL + ++ + +R Sbjct: 396 EDTGLILPLGLWALETACAQQVRWLSQGLPPLRMAVNISPLQFRNREFCDQVRAIVQRTG 455 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I + + LE+TE ++AESS+ + +L G R+AIDDFGTGY++ L++ D +K Sbjct: 456 IRAEHLELELTESAVMADAESSVGILRELRDSGIRLAIDDFGTGYSSLSYLRKFPLDRLK 515 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV I + +IV++I L + L V+AE VET ++ + + G QG+ + Sbjct: 516 IDRSFVSGIDRIPANELIVKAIVALGGSLGLDVIAEGVETPEELECIERCGCSEYQGFRL 575 Query: 722 GRPQPLAD 729 P D Sbjct: 576 SEPLTAED 583 >UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0A6 Length = 1517 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 100/473 (21%), Positives = 184/473 (38%), Gaps = 17/473 (3%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 W+ + + + E E ++ + + + + + A Sbjct: 1030 WSGEVESVRVNGERY----EMELNIDAV-HDDDGKISHFVGVFSDITSRKSTEKELLKLA 1084 Query: 327 LTDPLTLLPNFRALEQAPEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 TDPLT LPN + + + A + CL +DN + ++ G I+ I + Sbjct: 1085 NTDPLTELPNRSFFQASHQNLVRKGAQHTLLCLDMDNFKKINDSLGHQTGDILIKQIAKR 1144 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGA 439 L + ++ Y+L G E +++ + H L SR N +G Sbjct: 1145 LQRITGKSATCYRLGGDEFSVLMEDNADIHTVTHYAQNLLDTLSRPFIINKQEFVLGASI 1204 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + + Q +L + + + ++ +Q+ + N IR + Sbjct: 1205 GIAFFPDDGTSPQEMLKNADTAMYFAKNNGGN-SYQFFSGEMNQNAVRQLQIENLIRQGI 1263 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +Y QP + + + ++ GI++P +F+PL Q QVL Sbjct: 1264 KDDLFTVYYQPKVDIASGKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQIIEIGEQVL 1323 Query: 557 ESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 R +VN+ ++ RI ++ +SP + EITE Sbjct: 1324 RKACADTKRWVNQGLFSGRVAVNISAKQFELPDLDDRINKILSDIGLSPLHLECEITEGT 1383 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + E+ + + +L + G +A+DDFGTGY++ LKR + +KID F+ DI + + Sbjct: 1384 LMESPENGLQMMTRLRERGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAFIDDIAKSNV 1443 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D + +I ++A L VVAE VE + Q +L + + LQG+L RP Sbjct: 1444 DRHMAAAIINIAHNLGLKVVAEGVEEEAQLDILRRYDCEMLQGFLYSRPLNAE 1496 >UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3I9_9PROT Length = 1123 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 110/561 (19%), Positives = 224/561 (39%), Gaps = 37/561 (6%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--------------LLCTPYENDFIAGYL 243 +L E + L + +++ +L + + + Sbjct: 559 LLREHIRQALEESENKHRQLVETTPMGIVIYSNNKICYINPAAVTMLGASGAGEILGQAV 618 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFS 302 + + + + + F + + + + Sbjct: 619 LSFIVPDDREAASADLHTLQQGGY------VQPTEERFQRLDGSTFWGELRGVPVEYESQ 672 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCC 354 + +++ + + L + +D LT LPN R ++ S Sbjct: 673 PAVQLLIQDISSRKEAQEQLRLLSYSDELTGLPNRRLYSDRVEQACSMARRRKRPISLLF 732 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G ++++ LL ++ ++ ++ G E ++L E + L Sbjct: 733 LDLDRFKLINDTRGHACGDMVLKTVANRLLQTLRVSDTAARMGGDEFAVLLPETEPDKAL 792 Query: 415 QHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + ++ + + I N L +G F + E + LL + + L Sbjct: 793 RVAGKLIAALNQPILIGNQELIIGASIGLASFPADGEDGETLLKHADSAMYYAKQN--RL 850 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + ++ +++ L +++R A G L L+ Q + G + ++ + Sbjct: 851 NIHCFSSVMEAVAQRRMQLEDSLRLAAGSGQLSLHYQSQHSLAEGTITGMESLMRWHHPE 910 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKN 588 G ++P +F+PL + L + + + R S+N+ L+Q+N Sbjct: 911 LGNISPGEFIPLAEETGLIRSITAWAITEASRQALVWEEAGIRPERISINISAAELMQQN 970 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +A I+ L + P+ + +EITE A + E+ + + +L + G IAIDDFGTGY++ Sbjct: 971 LASEILTLIRGSGAKPEWIEIEITETAAMNQPETGIGIMRELVEGGVSIAIDDFGTGYSS 1030 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK+L AD +KID F++++ + DA+IVR+I +A A ++VVAE VETQ Q L Sbjct: 1031 LAYLKQLPADHLKIDIAFIRNLPDDAEDAVIVRTIIAMAHALGMTVVAEGVETQAQLDFL 1090 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + G +QGYL+G+P P + Sbjct: 1091 RQEGCDGIQGYLLGKPLPADE 1111 >UniRef50_A1ATR3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ATR3_PELPD Length = 754 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 90/437 (20%), Positives = 167/437 (38%), Gaps = 16/437 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + R + QA D LT LPN R + + +D Sbjct: 278 GVARDITDRKIAEETIAFQAFHDHLTHLPNQRLFKDRLEMAITHSKRHGGMVGVMFIDLD 337 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ +G ++++ L ++ + L + G E ++L + Sbjct: 338 RFKIVNDTHGHAAGDELLKNVAHRLRHCIRAVDTLARKGGDEFTVLLPDLMRAEDAALIA 397 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + E++ LL + A Sbjct: 398 EKIMHELGIPFSVAGQKFHVSASIGIAIVPRDGESIDTLLKSADIAMYRVKASGKN-GYR 456 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 ++ TK++ L N +R A+ + L+ QP + G + ++ G+ Sbjct: 457 FFTPDMNICYTKRISLENELRQAIPNSEFELFYQPQVSINGASIIGLEALIRWRHPTHGL 516 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAG 591 + P F+ L + + VL + LA R +VN+ P + ++ Sbjct: 517 LNPGDFIELAEETGMIGTITDWVLAEACRQLAHWRSMGFSDLRIAVNVSPKEFERDDMVE 576 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ R + + P ++ +EITE+ + S + ++ L + G RI+IDDFGT Y++ Sbjct: 577 QLSRFMSTFQLPPDSLEVEITEKILLRDTPSVINKMKTLRERGIRISIDDFGTCYSSLNY 636 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L++ IKID FV+D+ + I+++I +A L ++AE VET Q LH L Sbjct: 637 LRQFPISTIKIDQSFVRDLSEEHRISPIIQAIIGIANGFGLHLLAEGVETHCQMQTLHAL 696 Query: 712 GVQYLQGYLIGRPQPLA 728 G +QGYL RP P Sbjct: 697 GCNEMQGYLFSRPAPAE 713 >UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8Z9_METSD Length = 828 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 107/436 (24%), Positives = 183/436 (41%), Gaps = 16/436 (3%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDN 359 + + +R A D LT LPN Q + + G + +DN Sbjct: 387 VASDVTENSRYRKRIEQLAYHDILTELPNRLLFNQQLQILIEQTPINKHGFCLLFIDLDN 446 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + + R + L+ +++ L ++ G E + L + + Sbjct: 447 FKTINDTLGHSVGDKLLIEVSRRIRQLLGKDDMLARMGGDEFAISLPHCLSRLDAALLAA 506 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + ++ + + + L LL + Sbjct: 507 RIIDALNVPFEVSSIKFFVSASMGIAFYPEDSSHLDDLLKHADLAMYHAKRQGRN-NFQF 565 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 + ++ +++L+ N +R AL +G+L LY QPI E G + +L +D G++ Sbjct: 566 YNQELTVNAAERLLMENLLRQALAKGELQLYYQPIMELATGELHGAEALLRWNSFDLGMV 625 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGR 592 PDKF+P+ + + VL + + P ++NL +Q++ R Sbjct: 626 GPDKFIPIAEERGMIVDIGAWVLREGCRTAVAWNALRSQPCVLAINLSSRQFMQQDFLSR 685 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + PQ + EITE +++ +E LH G IAIDDFGTGY+ L Sbjct: 686 ITDCLQETGCHPQWLKFEITESLLLHDSDHIRQTLEALHSIGITIAIDDFGTGYSALGYL 745 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + +KID F+ DI TNT A++V++I +A + +VAE VET +Q LL +LG Sbjct: 746 NKFPVSQVKIDRSFISDIATNTESALLVKAIIAMADSLGKELVAEGVETAEQAKLLSQLG 805 Query: 713 VQYLQGYLIGRPQPLA 728 QY+QGY GRP PL Sbjct: 806 CQYVQGYYYGRPVPLE 821 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 610 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 122/564 (21%), Positives = 196/564 (34%), Gaps = 40/564 (7%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 L +R L +E+ +L+ + S++ Y+ D YL P Sbjct: 244 RLLKRTDTALLRREREFRSLAENSPDSIM------RYDRDCRIVYLNPSLENTLLFSASD 297 Query: 258 -LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL-----------------AVLI 299 + L + + +L Sbjct: 298 MIGRTPTELHPGDERFETYESKLRAVVATGKADEIELLLQGTHKGPRLLHIRLVAEHDPD 357 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKS 351 +L + R + RR A DPLT LPN L Q + Sbjct: 358 GECTGVLAVGRDITEVDEYRRRIQRLAFFDPLTDLPNRALLNDRIRQCLTDAAARGSQFG 417 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + R L ++ + + +L G E ++L Sbjct: 418 LMLLDLDRFKEVNDTLGHSAGDRLLCEAARRLNACVRGYDTVARLGGDEFSILLPVVRDR 477 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 G L+ + + L + Q L Q + Sbjct: 478 GDLRAIAGRILEAFGEAFIIEGKELFVSVSIGIVLHMEGQCDADRLFKQADLAMYHAKRQ 537 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 E ++ Q + + + +R AL G+L LY QP G + +L Sbjct: 538 GRN-NFQFYAEELAVQVSDRTAMEGALRKALGNGELELYYQPQVALPAGRIVGAEALLRW 596 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 GIMTPD+F+P+ + L VL + + + +VNL Sbjct: 597 RHPQEGIMTPDRFIPIAEETGLIRDLGHWVLTTACRRAVYWHRTVDSPFKVAVNLSTRQF 656 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++ ++ G + R+ + P+ + LEITE N +E+LH GF I+IDDFGT Sbjct: 657 VRNDLPGELQRIVQDTGCRPEWLELEITESLLLGNDAEVGAALEELHDMGFAISIDDFGT 716 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+ L R D IKID F++ + +V++I +A A L V+AE VET Q Sbjct: 717 GYSALSYLNRFPLDQIKIDRSFIQGFPADREKVELVKAIISIAGALQLEVIAEGVETSHQ 776 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 LH G + QG+L GRP P Sbjct: 777 AEYLHAQGCRLAQGHLFGRPLPQD 800 >UniRef50_Q1NX89 PAS:GGDEF:EAL:Response regulator receiver n=4 Tax=Deltaproteobacteria RepID=Q1NX89_9DELT Length = 730 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 102/485 (21%), Positives = 185/485 (38%), Gaps = 40/485 (8%) Query: 283 QGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRR-------WHLQALTDPLT 332 + L + + + +R + L + A D LT Sbjct: 236 DKEGVPLYVETNAYPLRDQNGHIYAAVETIRDITEIKELEQEKRAKEAEIERLAFYDFLT 295 Query: 333 LLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN R L+ EQ + L +DN + ++ G ++ R L Sbjct: 296 DLPNRRLLQDRLEQAFAASERSGQYGAVIFLDLDNFKNVNDTRGHRTGDLILQMTARRLR 355 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEG--------RLQHMVNILNSRQIHW-------- 428 ++E++ + +L G E +++LS T+ R+ + + +R Sbjct: 356 DTVREDDTVARLGGDEFVILLSNLATQSETAISRVGRVAEKIRLALARPFQLTKPQQGSS 415 Query: 429 -NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + +G F G++ + + L ++ A + + + Sbjct: 416 LESGEFHLGASLGIALFRGHENSAEELFKYADTAMYRAKEAGRNTA-RFFDPAMQTALEE 474 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 L +R A+ Q LY QP + G + +L G ++P F+PL + Sbjct: 475 NESLERDLRRAVVQEQFELYYQPQVDAAGRLLGAEALLRWYHSARGPVSPLSFIPLSEEN 534 Query: 546 NLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL+ + LAT R ++N+ Q + + + Sbjct: 535 GLILPIGRWVLQEACRQLATWSQSFPVGDFRLAINVSARQFHQPGFVDEVQEIIAAARVE 594 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + LE+TE ++ + ++ + QL G A+DDFGTGY++ +LK+L + +KID Sbjct: 595 PRQIKLELTETLVLTDLDDTIKKMRQLQAAGLGFAMDDFGTGYSSLAKLKQLPLEQLKID 654 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV+D+ T+ DA I +I + + +VAE VE+ +Q +L G QGY Sbjct: 655 RAFVRDLETDPHDAAIAATIIAMGRTLGFEIVAEGVESAEQLQILQSQGCGIFQGYYFTP 714 Query: 724 PQPLA 728 P P A Sbjct: 715 PLPAA 719 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 93/462 (20%), Positives = 179/462 (38%), Gaps = 19/462 (4%) Query: 283 QGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 L + + + + R + + ++ DPLT LPN Sbjct: 111 HKDGRPVRLWLSITSQRGADGKVARRIAVFRDVTEARETAEQLWQRSNFDPLTELPNRNL 170 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + + +D + ++ G + ++ R +++ + Sbjct: 171 FLDRLLQALVLAGREGSKVAMLFIGLDGFKNINDSLGHWIGDKVLQEAARRFQNCLRQGD 230 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + G E +VLSG ++ ++ + + + + + G+ Sbjct: 231 TAARFGGDEFTVVLSGVRATAEVEAVIRSVLEVLQEPFVVEHHHILISCSIGVCMWPGDG 290 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 E + L+ + +Q+ + + + L + + AL QG+ L Sbjct: 291 EDVDSLMRNATAALQQAKQAGRN-TFRFFTPAMDARAQARSRLADELSGALSQGEFHLVF 349 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP+ + + + +L G+++PD+F+PL + L +L + + Sbjct: 350 QPLVDVKSGKVNAAEALLRWHNRYLGVVSPDQFVPLAEEIGLIRPIGEWLLTAACREALV 409 Query: 566 HPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 G +VN+ P Q +I G I R + + P + +EITE SN E + Sbjct: 410 WQGMGLGEINIAVNISPRQFQQGDIVGIIRRALEDTRLPPWLLTIEITEGLLLSNGEEIL 469 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +E + G +++DDFGTGY++ LK D++KID F+ D+ ++ DA +V +I Sbjct: 470 AKMEAIRTLGVSLSVDDFGTGYSSLSYLKSFPVDVLKIDRSFIADMGDHSDDATMVEAII 529 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 L + L VVAE VET+QQ + G QGY P Sbjct: 530 ALGHSLHLEVVAEGVETKQQLDFITAQGCDVAQGYYFSPPLS 571 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 87/448 (19%), Positives = 179/448 (39%), Gaps = 18/448 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 ++ + QA D LT LPN R EQ ++ Sbjct: 538 DGRVTRMIGTHTDLSERKLAEETIRRQANYDSLTQLPNRRLFRDRLEQTIRLAKRDQSSF 597 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D+ + ++ G + + + ++E++ + ++ G E +++L Sbjct: 598 ALMLIDLDHFKEVNDTMGHDAGDFLLVDAAQRIQHCVRESDTVARMGGDEFVVILPDVND 657 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++ + + + + + + ++++ LL + Sbjct: 658 PDNIERIAQNIITKLAAPFVLGEEKAFISASIGITLYPSDADSMETLLKNADQAMYVAKH 717 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + ++ K++ L+N +R AL L ++ QPI + + ++ Sbjct: 718 LGRNR-MSYFTPVLQENAQKRMRLVNDLRDALSSNQLRVFYQPIVELATGDIHKAEALIR 776 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLT 583 L G+++P +F+PL + + VL + + KG + SVN P+ Sbjct: 777 WLHPTRGMVSPSEFIPLAEETGMIIEIGDWVLRQAMHQVKRLQASHHKGFQISVNKSPVQ 836 Query: 584 LLQKN--IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 N A + ++ + ++++EITE + + + G ++AIDD Sbjct: 837 FHNDNPLKAAEWLGELEQNGLLASSLVVEITEGVLLDDDGNVKDRLLASRDAGIQVAIDD 896 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK+ D +KID FV ++ + D + +I +A L V+AE VET Sbjct: 897 FGTGYSSLAYLKKFDIDYLKIDQTFVNNLGNQSDDMALCEAIIVMAHKLGLKVIAEGVET 956 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +QQ+ LL + G Y QG+L + P + Sbjct: 957 EQQRDLLKQAGCDYAQGFLFSKAIPAEE 984 Score = 53.1 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 81/301 (26%), Gaps = 43/301 (14%) Query: 39 SSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVL 98 + I W+P V L+ L G + + G L + L + + + Sbjct: 39 EAKISPVWLPSGVGLAALIAGGRKYWPGIFIGALAAYLVIWRSVPLSFFIASSNVLEALT 98 Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 + + WL + L + L + Sbjct: 99 AVWLLSLIKTFDSGFKQPRD------YLWLIFAGS----IAAMLAATIGVVTLVFANVLP 148 Query: 159 DADAIFTVVDLL-SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE-KRAFT 216 AD + + + ++WR+ + + KE R Sbjct: 149 IADIFHAWGYWVMGNLLGIALGTPF--------------LLIWRKQPSRWINKEQSRWLE 194 Query: 217 LSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST 271 LS A L+ L + D GYL+ +F + +G+ + L AV Sbjct: 195 LSLFAVLAFLTSLVAFHGWTSSSFEDIPLGYLMYLFVTWAAIRLGRHGVTLVLLLTAVQG 254 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV---------RIYHRSEWLNRRW 322 + F G F L ++ S+ L+ +V R R Sbjct: 255 VLGALDGVGFFAGDIHSGLANFWLYMI---SLSLVGVVLESTIRQHRRDGDALRESESRL 311 Query: 323 H 323 H Sbjct: 312 H 312 >UniRef50_B0SAR7 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SAR7_LEPBA Length = 694 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 90/456 (19%), Positives = 184/456 (40%), Gaps = 18/456 (3%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------L 340 + + + +F + + + + A D LT LPN + Sbjct: 229 FDILATPIPIENFGLAV--AFLDITQRRHAEEKIAYMAFFDQLTNLPNRNSLIDKLFPIF 286 Query: 341 EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 E+A + +DN + ++ G I+ + + ++ + + + G E Sbjct: 287 EEARRHGNLVGILAIDLDNFKIINDSRGHDFGDKIIKLVAYRIRESIRVYDLISRQGGDE 346 Query: 401 LLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +VL E + + + + + + + + LL Sbjct: 347 FTVVLPDLSNERDAAVISESILDAMTHPFVIDGERIFVNISIGIALYPTDGKDSNTLLKN 406 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--- 514 + + E + +++ + N +R A+ + L QP + Sbjct: 407 ADSALNLAKSQGKN-CYVFFTEELQTVVAERLEIENRMRIAIIENQFTLMYQPKIDLYTR 465 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGP 573 + G + ++ + G+++P+ F+P+ + + V++S +K + K Sbjct: 466 KPVGVEALIRWRHPERGLISPNVFIPISEETGMILAIGEWVIKSAIKTMREWKDHGVKDI 525 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ + + I K Y + P + +E+TE NA++++ ++++ K Sbjct: 526 SMAVNISTKQFKHERLISTIAENLKLYKVDPHDLEVELTESSVMENADAAVRTMQEIRKL 585 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +IAIDDFGTGY++ LK+L +KID FV +I T+ I+ ++++LA LS Sbjct: 586 GAKIAIDDFGTGYSSLGYLKKLPISSLKIDRSFVSEITTDKDSKTIIHAVSNLAHNLGLS 645 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE ET++Q LL + GV +QG+ +P D Sbjct: 646 VVAEGAETEEQVRLLAESGVDQIQGFYFAKPMTSED 681 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 190/442 (42%), Gaps = 16/442 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQAPEQ--EAGKSFC 353 + + ++ R A D LT LPN +L QA A + Sbjct: 318 GTFLGYRGVCSDVTATKDAELRIAHLAHHDALTGLPNRAFMSESLHQALRDPDRACLAVL 377 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ YG + S+ L + + + + G E +++ + Sbjct: 378 SLDLDGFKAVNDRYGHPGGDALLTSVAERLQNEVSGGDIVARFGGDEFVVLNVAFTSPSE 437 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 ++ + L S + +N + +G + T + LL ++ Sbjct: 438 VEDLARRLIESLSTPVPLDNESVTIGVSIGIAFAPTDGRTAEELLKNADAALYRAKTAGR 497 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 E + + + L+ +R AL + +L L QP G + +L Sbjct: 498 G-TFRFFEPEMDRKLQARQRLVQDLRNALTRDELRLDYQPFVKSETGVISGCEALLRWRH 556 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 + G+++P +F+PL + L + V++ + A+ P R SVN+ P+ + Sbjct: 557 PERGMISPVEFIPLAEESGLIVPIGMWVIQQACREAASWPSTY---RISVNVSPVQFRSR 613 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ I+ ++P + +E+TE +A++++ + Q+ G R+A+DDFGTGY+ Sbjct: 614 DLPQVILAALTSSGLAPARLEVEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYS 673 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+R D IKID FV+++ T +IV++I D+A+ ++V AE VET Q Sbjct: 674 SLSYLRRFPFDKIKIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKR 733 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + G + LQG+L RP+P + Sbjct: 734 LRQTGCEELQGFLYSRPRPANE 755 >UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacteria RepID=A4C9D0_9GAMM Length = 1503 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 97/473 (20%), Positives = 193/473 (40%), Gaps = 19/473 (4%) Query: 274 LLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 ++ + + + ++ + + + ++ + + + A D Sbjct: 1018 HFQSDEVVVTADGIAHPVIIKVSTVGDKDNNINNYIVVITDISEQKDAEKELRVLANYDT 1077 Query: 331 LTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L + + + +D+ + ++ G + + ++ + Sbjct: 1078 LTKLPNRSLLLDRISHATELSRRHKNRLALLFIDLDHFKQVNDTLGHDLGDTLLITVAQR 1137 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGA 439 L +++ + + +L G E ++++ +T L + + S + N + + Sbjct: 1138 LKYGLRKQDTVARLGGDEFVILIEDIDTIDELIPVCRKICEEVSLPVQLGNHRMTVEPSI 1197 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + + LL + + ++ + ++V L N ++ A+ Sbjct: 1198 GVAIFPDDADNSLDLLKSADIAMYHAKKRGGA-TYQFFHQEMNHKIQRKVQLENELKEAV 1256 Query: 500 DQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 + Y QPI + +G++ +L + + +++P +F+P+ L L Sbjct: 1257 KLNQFVNYYQPIISATDFTLKGFEVLLRWRQDNK-LISPAEFIPVAESMGLITTLTFAAL 1315 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 ++ L K SVNL + I ++ + + ISP V+ EITE Sbjct: 1316 TRAMQDLKAWLVSKPDCYVSVNLSARDFEHETIGEKLTDIILQADISPTQVVFEITESAL 1375 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 +++ ++ + L + G RI +DDFGTGY++ LKR D++KID FV DI + D Sbjct: 1376 MQDSQKALEAMLILKQKGCRIYMDDFGTGYSSLSYLKRFPIDVLKIDQSFVADIGQDASD 1435 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I+ S LA + S VAE VET+ Q L LG YLQGYL +P P + Sbjct: 1436 EAIIHSTLALAHSLGKSCVAEGVETKAQVEFLQMLGCDYLQGYLFSKPVPSNE 1488 >UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacillaceae RepID=C5D6R4_GEOSW Length = 951 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 114/635 (17%), Positives = 226/635 (35%), Gaps = 36/635 (5%) Query: 129 GLVTPIG--IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 G P+ I ++ V F + + D D +L+L + Sbjct: 309 GYAYPVLEQITTTLEQVAPTFTPFIFVELVIKDRDIRSATFSMLALSEGNQNGENSSASV 368 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY--LV 244 + I + ++ S + +R + S+ Y D + + Sbjct: 369 SLSIPEMFQGVMTLANLMSTSSREMERLRVHVQ-ISQSLFEHNTDIVYSTDLHGNFTNVN 427 Query: 245 PVFFIIFTLGVGKLRYP-FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---------- 293 P F I ++ + L + + L+G Y+L Sbjct: 428 PAFEKILGYTKEEILHTNALKYMHPNDVPRVSRHFYRALRGKIQYYNLEIPTKSGETLLF 487 Query: 294 ----ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------- 342 + ++ V + + R + + A DP T LPN + Sbjct: 488 QIKNVPIIVDGKKVGIYGIGRDITEQKKAEEKISYLAYYDPDTHLPNRTKFMEIIDEQLE 547 Query: 343 -APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 A ++ + + +D + ++ G ++ + + + ++ L + G + Sbjct: 548 KAKQKNRKLAVVFIDLDRFKLVNDSIGHYAGDEILKQVVQRIQHVLPAGAYLGRFHGDKF 607 Query: 402 LLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 L+L+ + ++ I + N + + + LL Sbjct: 608 CLLLTERTDSEGVFKTAAHISKEVMKPIVYENKEFFITISIGISFYPNDGVDKHSLLKNA 667 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--- 515 ++ + ++ +T ++ + +R AL+ + L QPI + Sbjct: 668 DIALNKAKQSGGNR-IQFYSAKMNEETLYRLEMERYLRKALENQEFFLCYQPIIDIHKGV 726 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPR 574 G + ++ G++ P++F+ L + L VL + K + Sbjct: 727 IVGNEALIRWRHPKLGLVRPNEFISLAEETGLIHEIGRWVLVTACKQTKKWQQLWNQQLF 786 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN+ + + + ++ +SP + LE+TE N S+ +++L + G Sbjct: 787 VSVNVSARQFQHEGFIDDVKQALEQSQLSPNCLHLELTENSMLRNLHYSIQVMKELQQLG 846 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 IAIDDFG+GYA++ LK L +I+KID FV+ + TN+ D IV++I + L Sbjct: 847 VGIAIDDFGSGYASFSYLKNLPVNILKIDRSFVEQMHTNSSDIAIVKAIITMGHGLGLKT 906 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET +Q LL L + QGY + RP + Sbjct: 907 VAEGVETVEQLELLKMLHCHHAQGYALYRPVTAEE 941 >UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MED7_DIAST Length = 894 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 99/447 (22%), Positives = 180/447 (40%), Gaps = 21/447 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 ++ + A D LT LPN R L + Sbjct: 431 DGGVVIIYHDVTDLRLATAEVEHLAFYDQLTGLPNRRLLLDQLGDASASAVRTGTHGAVL 490 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-- 411 + +D+ + ++ G + + ++ + R L ++ + + +L G E +++L+G TE Sbjct: 491 FIDLDHFKTLNDTLGHEIGDYLLQQVARRLESGVRVGDIVARLGGDEFVVLLAGLATEAE 550 Query: 412 ---GRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 +++ + L ++ F +T +L Q Q Sbjct: 551 RAREQVRAVAEKVVQLLAQPYPIAGQSYHGSCSVGAALFGSVLQTAAEVLKQADIAMYQV 610 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEIL 523 A A+ + + + + L + ++ AL +G LL+ QP + G + +L Sbjct: 611 KAQ-RGNAVCFFDPRMQVALSARARLESDLQDALREGQFLLHLQPQFTRDGAVVGVEALL 669 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMP 581 + G++ P +F+ + L VL S + LA + SVN+ Sbjct: 670 RWQHPERGLVLPAEFIGVAEDSELIVPLGRWVLASACELLARWQASPRLRELSLSVNVSA 729 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + ++ +L R + LE+TE + E S+ + QL G R A+DD Sbjct: 730 RQFRSPDFVEQLSQLLLRSGAPAHRLELELTESLVLEDVEDSIAKMHQLRTKGVRFAVDD 789 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L RL +KID FV + + D ++V++I +A+ L VVAE VET Sbjct: 790 FGTGYSSLAYLTRLPLHRLKIDRTFVHHLGESRSDDVVVQTILGMARNLDLEVVAEGVET 849 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++Q++ L G QGYL+ P P+ Sbjct: 850 EEQRSFLALHGCDVYQGYLLAHPMPVE 876 >UniRef50_C6N027 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N027_9GAMM Length = 505 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 92/439 (20%), Positives = 181/439 (41%), Gaps = 16/439 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 ++ R + L ++ QA D LT LPN + Q + + Sbjct: 58 IWSFRDITQRVILEKQLKYQATHDSLTGLPNRVLMLDRLGHVLDKAKRQNTLFAVIFFDL 117 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G ++++ + L +++ + L +L G E ++++ + E + Sbjct: 118 DRFKLINDSIGHDTGDELLKTVAKRLEFMLRGTDTLARLGGDEFIVIVDNIKNEFDAGTV 177 Query: 418 VNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 L L + A F + +T+ LL Q+ Sbjct: 178 ATHLLESFNSNFEIAGQSLSVCSSAGISIFPRDGKTIGELLRNADAAMYQAKNSGGNQ-F 236 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + Q ++ +L N + A+ + ++Y QP + ++ + ++ G Sbjct: 237 QFYTAELGTQIKEKFVLENELHDAVLNNEFMIYYQPQFDITTQKISSVEALIRWNHPKRG 296 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 I+ P F+P + L L++ + R +VN+ + Q + Sbjct: 297 ILLPIDFIPAAEETGLIIPIGEWTLKTACEQNKKWQDAGFLPMRVAVNISLKQIKQFDFV 356 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 +I + +SP + LEITE + E ++ ++ +L+ G I +DDFGTG ++ Sbjct: 357 QKIKGILDSTGLSPNWLELEITENVLLNAIELALSSLPELYAMGIHITLDDFGTGTSSIN 416 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+++ D +KID F+ +I NT D +I++SI LAK +L +VAE VETQ+Q L Sbjct: 417 YLRKIPLDRLKIDQSFISNINLNTSDEVIIQSIISLAKKLNLKIVAEGVETQKQLEFLQS 476 Query: 711 LGVQYLQGYLIGRPQPLAD 729 + +QG+ +P ++ Sbjct: 477 NHCEEVQGFYFSKPVAPSE 495 >UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodocyclaceae RepID=Q47C60_DECAR Length = 714 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 112/549 (20%), Positives = 196/549 (35%), Gaps = 32/549 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYL----VPVFFIIFTLGVGKL 258 E R ++ + + + Y + + + G Sbjct: 155 QLTETELRYRSIFENSVVGMFQSTESGRYLAANPALARLYGYSTPEALISSLADIASGLY 214 Query: 259 RYP-----FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVR 310 P F L + N+ + +A + S L V Sbjct: 215 VDPQRREDFKQLIQRDGRVT--NFESEITCRDGSRIWIAEHAHAVRSADGSFLYYEGTVE 272 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEF 362 QA DPLT LPN LE Q + + + +DN + Sbjct: 273 DITERHRYQSVLQHQATHDPLTGLPNRNLLEDRLAQAVQLARRKSSKVALAFVDLDNFKV 332 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + I L ++ + + + G E +L+L + H++ + Sbjct: 333 INDSLGHAAGDQLLIEISSRLRAALRGLDTVARYGGDEFVLILGEQTSMADTMHLLERVL 392 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + GL + F + + L LL + Sbjct: 393 VSIQAPLALEGHGLRINCSIGVSVFPDDAQDLDGLLRVADVAMYHAKESGKGQ-YCFYTR 451 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYDEILARLKYDGGIMTPDK 537 ++ + L + +A++ +L + QP + EG G++ ++ G++TPD+ Sbjct: 452 DLNQAAQDRFSLETALGSAIENNELTVVYQPKVDGEGMVRGFEALVRWNSAGRGLVTPDR 511 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + QVL + + A P D + +VNL L + + G + Sbjct: 512 FIPLAEETGQILAIGEQVLYAACRTAANWPLIDGQALSVAVNLSARQLREPGLPGLVADA 571 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P+ + LE+TE + E ++ ++ + G RIA+DDFGTGY++ L+RL Sbjct: 572 LAVSGLPPECLELEVTESMIMGDMEHNIRVLKSIKALGVRIAVDDFGTGYSSLAYLQRLP 631 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV I +I L K L +VAE VET +++A+L G Sbjct: 632 IDTLKIDRSFVSGCNRGGKAMAIPHAIIFLGKTLDLHIVAEGVETDEERAILAVCGCNEF 691 Query: 717 QGYLIGRPQ 725 QGYL RP Sbjct: 692 QGYLFSRPL 700 >UniRef50_A1SBS3 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1SBS3_SHEAM Length = 709 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 104/456 (22%), Positives = 176/456 (38%), Gaps = 21/456 (4%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 IL + + + R + A D LT L N L + Sbjct: 235 VILRGADGTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCE 294 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + + +DN + ++ G + ++ + LL ++ E + +L G E ++V Sbjct: 295 RSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVIV 354 Query: 405 LSGPETEGRLQHMVNI--------LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 + + R + L + L F + L+ LL Sbjct: 355 MENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLEELLK 414 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--K 514 Q Q+ AL + + ++V L N +R + + + L+ QP + Sbjct: 415 QADVAMYQAKEAGKN-ALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVDACG 473 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKG 572 G + ++ G++ P++F+PL Q +L VL + L Sbjct: 474 RLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQ 533 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 SVN+ + N R++ + +P ++LE+TE N E + + L Sbjct: 534 ISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRV 593 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G R ++DDFGTGY++ LKR +KID FV++I N DA+I I LAK L Sbjct: 594 RGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGL 653 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VET+ Q L Y QGYL G+P + Sbjct: 654 GVLAEGVETEDQLNFLLAHDCSYFQGYLFGKPCAIE 689 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 608 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 99/477 (20%), Positives = 186/477 (38%), Gaps = 20/477 (4%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 W+ + ++ ++ + L + + + + + H A Sbjct: 324 WSGEIIDRKKSSERYIAEMN-----IIALHNDDGILTNYISITNDISKKKEQEKLIHNLA 378 Query: 327 LTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN E+ + + + +DN + ++ G M + Sbjct: 379 YFDSLTDLPNRVLFEERVVSRIPFSKRHDKKMALLFIDMDNFKNVNDTLGHFMGDMFLIE 438 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDM 435 + + ++E + L +L G E ++L + + + + + + + L Sbjct: 439 VSNIIKNSIREQDTLARLGGDEFTVLLEDINSIMDIVPIAEKIIAAFNNPVLIESKELYT 498 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G + + ++ L Q A ++ ++ + T+++ L N++ Sbjct: 499 GISMGISLYPDDGKSYNELFKAADTAMYQVKASGKN-NFQFFKQSMNEKITERLFLENSL 557 Query: 496 RTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ +L L QP N G + ++ + G++ PDKF+ + + Sbjct: 558 RNAIGNNELFLVYQPKINLETKRVYGMEALIRWRHPEIGLIRPDKFISISEETGQIYNIG 617 Query: 553 LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 L V + + S+N+ L + I + I V LEIT Sbjct: 618 LWVAKQAIIDTKALHEAGHILTVSINVSSKQLENEKFIDDICCVVNEIGIDKSYVELEIT 677 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E SN + ++ + +L GF+++IDDFGTGY++ LK+L A IKID FV DI Sbjct: 678 ESHIMSNIDKALKILNELSDKGFKLSIDDFGTGYSSLSYLKKLPAQTIKIDRSFVLDIYK 737 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D IV +I +AKA V+AE ETQ+ L L +QGY +P + + Sbjct: 738 DEDDRSIVATIIAMAKALGKDVIAEGSETQEHIDTLKYLHCNKVQGYFFSKPIEIDE 794 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 608 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 93/428 (21%), Positives = 170/428 (39%), Gaps = 17/428 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQEAGKSFCCLRIDNLEFMSRHY 367 E R AL DPLT LPN L G + + +D+ + ++ Sbjct: 440 ERELAQGRLTHHALHDPLTGLPNRVLLLDRLEVALAQRSRGGVAVAFVDLDHFKLINDSL 499 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G I + L +++ + + + G E +++ E ++ + L + Sbjct: 500 GHAAGDTVITAAATRLRAVVRPGDTVARFGGDEFVVLAESVVDERDVEGLAERLAGALAE 559 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + G LL ++ + + ++ Sbjct: 560 PFDLAGDEVFVTASIGIAVSSGTGGDAHGLLRDADAAMYRAKEAGRAR-HEVFDSVMRAG 618 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPL 541 +++ ++N + AL++ +L+ QP + G + +L + + G++ P +F+P+ Sbjct: 619 AIRRLEIVNDLHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGLIPPLEFIPV 678 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + L VL + + T SVNL L Q +A + + Sbjct: 679 AEETGLINDLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRLAEEVAAALE 738 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++LEITE ++ ++++ +E L + G R+AIDDFGTGY++ L+R D Sbjct: 739 DSGFPADQLVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSLTYLQRFPID 798 Query: 659 IIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 I+KID FV + + N ++ + R+I LAK L VAE VE + L L Q Sbjct: 799 ILKIDKSFVDGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVRELQSLHCDIGQ 858 Query: 718 GYLIGRPQ 725 GY RP Sbjct: 859 GYFFARPL 866 >UniRef50_Q1JVN0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVN0_DESAC Length = 635 Score = 608 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 116/580 (20%), Positives = 217/580 (37%), Gaps = 30/580 (5%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE----KRAFTLSWLAALSVL- 226 A + ++Y+ +W R + +L K+ + L A+ + Sbjct: 37 YIGAPVWRVQVYYFPAVYGSIAGGLVGIWSRRLRQALVKQVKLQEHYLDLFENASDLIQS 96 Query: 227 ----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC---LLNYNQ 279 +L GYL + V + +S L L Sbjct: 97 VRLDGSILYVNRAWKETLGYLDHDIPSLNIFDVISSADRPICRNRVISLLDGAELGPIEV 156 Query: 280 NFLQGVETEYSLA--FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 F L L + + R + ++ H A D LT LPN Sbjct: 157 TFQCKDGRAVLLEGNISLRQDEGQPHSVRGIFRNISERKQAEQKIHQLAYYDTLTGLPNR 216 Query: 338 RALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L+ + + +D + ++ G + ++ R L +++ Sbjct: 217 VLLQDRLIHAIADARRFSHYLAVMFIDLDQFKKVNDTLGHSVGDLLLKDAARRLRSCLRD 276 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 N+ +L G E +++LSG + L H+ + S+ L + + Sbjct: 277 NDTAARLGGDEFVVILSGFKQISNLPHIARKVLDVLSQPYFLAERELVVSASLGISVYPQ 336 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + + L+ + H E ++ T+Q+ L +R AL + Sbjct: 337 DGDNAELLMRNADMAMYAAKYDHGN-GYCFFSEEMNKNATRQLELEEQLRHALIDQQFEV 395 Query: 507 YAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QP + ++ G + ++ + G ++ P+ F+P++ VL + Sbjct: 396 YFQPQFDWSRQKLTGVEALVRWNRAQGEVVPPEMFIPVVESTGQIVALGEWVLRQACLQI 455 Query: 564 ATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 C + SVNL ++ ++ ++ + + P+ + LEITE NA+S Sbjct: 456 QQLQCQLNVPLQLSVNLSGRQFDDLSLIYKVKKILQETNFPPEQLELEITETILMENADS 515 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + QL + G R+AIDDFGTGY++ L D +KID F+ +++ + A IV + Sbjct: 516 ARKTLGQLSQQGIRLAIDDFGTGYSSLNYLNTFPVDRLKIDKSFLVNVMHDDNHAAIVAT 575 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 I +A LSV+AE VET +Q + L LG Q +QG++ Sbjct: 576 IISMADTLGLSVIAEGVETMEQVSFLSDLGCQAMQGFIFS 615 >UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2U2_PELCD Length = 988 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 93/445 (20%), Positives = 182/445 (40%), Gaps = 16/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAPE----QEAGKS 351 + R H A D LT LPN + + E + G + Sbjct: 526 GRVSGFATFSLDVSEQKKAQRTIHRMAYYDHLTELPNRALFQKELDRRLEEAVGRGHGLA 585 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ G ++ I L + + L +L G E + +L+ + Sbjct: 586 LMFLDLDHFKGVNDSLGHAKGDLLLQKIAARLQGCLGREDFLARLNGDEFIFLLTEIDDP 645 Query: 412 GRLQHMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 ++ + + + + + + +G + + ++ L+ + + Sbjct: 646 VAVKALAGNVQRIMASPFNLDGDEIYVGTSIGIACYPLHGVDVENLMKRADRALYAAKER 705 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 A++ E ++ + ++ L ++ AL + + L QP + G + +L Sbjct: 706 GRN-AIELFSEQINARFHRRQQLEMRLQNALAKNEFFLEYQPQVDLQTGRMLGVEALLRW 764 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTL 584 D G++ PD F+ L + L VL + + L+ + R +VN+ + Sbjct: 765 RNDDLGLVMPDDFISLAEETGLIRPIGEWVLRTACQEYLSWWQPEGAELRLAVNISGQQI 824 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + I + P+ + LEITE A + E ++ L ++AIDDFGT Sbjct: 825 KHPDFVPIIDDILHSTGFDPRLLELEITETVAMEDVEGNIGTFRDLKARRLQLAIDDFGT 884 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+ D +KID F++D + A +V +I +A++ L ++AE VET++Q Sbjct: 885 GYSSLSYLRHFPIDRLKIDRKFIRDAAKCSDSASLVEAIMSMARSLHLDIIAEGVETEEQ 944 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 A L K G + +QG+ GRP +D Sbjct: 945 VAYLWKQGCRQIQGFFFGRPMSASD 969 >UniRef50_C6MV72 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MV72_9DELT Length = 594 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 97/477 (20%), Positives = 181/477 (37%), Gaps = 18/477 (3%) Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQA 326 T+ L ++ + + + + S L MV + R+ A Sbjct: 97 GTIGLWKRESLNVRKDGLVFPVQLTSLPIKNASGRCLGMVTACEDITARKEFERQLETLA 156 Query: 327 LTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D +T LPN L + + L +DN + ++ G + ++ Sbjct: 157 YYDTVTKLPNRALLMDRLHQALALAQREGRELALLFLDLDNFKDLNSARGHEVGDKFLQE 216 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDM 435 + L + E L + G E ++V++ E + L + + + Sbjct: 217 VAARLASCLCEANTLARPGGDEFVIVINSGPDEEGVAATAARLQALFIEPFGIDGEEVYG 276 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 F + ++ LL Q+ + + ++ +T ++V L N + Sbjct: 277 STSIGIALFPEDGSDVESLLRCADAALYQAKSEGKG-GYQFFSQEMNERTMRRVALENGM 335 Query: 496 RTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R L + + L+ QP + G + +L + G++ PD+F+P+ + Sbjct: 336 RQGLARDEFFLHFQPQWDLKSFRLTGAEALLRWQSAEFGLVGPDEFIPIAESSGVIFDLG 395 Query: 553 LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + +VN+ Q + R+ + + P ++ LE T Sbjct: 396 ELVLRQACLHAVRWEEFCPDLKVAVNISGRQFRQPGFLETMARVVRETGVRPSSLELEFT 455 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E AE ++ ++ L + G R++IDDFGTGY++ LK D IKID F+ ++VT Sbjct: 456 ESVIMERAEKNIDALQALKRMGVRLSIDDFGTGYSSLNYLKHFPIDAIKIDRSFIAELVT 515 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ DA I +I +A + L V+AE VE Q L QG+ P P + Sbjct: 516 DSDDAAIADAIISMAHSLKLKVIAEGVENSDQLHFLVGRKCDEAQGFYFATPMPGEE 572 >UniRef50_B2UJT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UJT5_RALPJ Length = 652 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 97/436 (22%), Positives = 168/436 (38%), Gaps = 17/436 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 +L + + +R A D LT L N ALE E + S L Sbjct: 195 VLVSLVDITQIREAQQRIRHLATHDTLTGLLNRSALEDRLEHALALGRRNRSRVSVMFLD 254 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G +R + L +E + + +L G E +++L + G + Sbjct: 255 LDRFKNVNDTLGHQFGDMLLREVAARLQACAREADTVARLGGDEFVVMLESLDAMGT-RR 313 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + S H L +G + + LL + + Sbjct: 314 VAERILSAIGAPFHIEGQELYLGVSIGIAVAPRDGDDPHTLLRKADAAMYLAKERGRN-N 372 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + + + +++ + + +R A D+ + QP + G + ++ D Sbjct: 373 FQTFTSDLDDRVSRRFRIESGLRRASDRNEFYADYQPRVDVRSGRIVGVEALIRWNSADF 432 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNI 589 G M P +F+ + L D +L + LA R S+NL + Sbjct: 433 GRMMPGQFIQDAEETGLIVEIDRWILRAACDQLARWRRIGLPHLRMSINLSGQAFSSGKL 492 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + + R + AV LE+TE + S + +L G +A+DDFGTGY++ Sbjct: 493 SDMVRRALSASGLPGDAVELEMTEGILIRDDPSLHALLTELRAMGVSLALDDFGTGYSSL 552 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L R D +KID FV+D+ A I R+I +A+A + VAE VE+ Q L Sbjct: 553 SYLHRFPIDTLKIDRSFVQDLPHVAERAAITRAIIMMAQAMGMRTVAEGVESTGQLDFLR 612 Query: 710 KLGVQYLQGYLIGRPQ 725 ++G QGYL+ RP Sbjct: 613 EVGCDEFQGYLLTRPL 628 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 113/567 (19%), Positives = 213/567 (37%), Gaps = 32/567 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY 242 RM+ + +++ L T+ A+ + +L +L + GY Sbjct: 385 RMLGTRRDVSARRQQEQEQRLAA-----TVFEAASEGIFILDPDYRVLAVNRAFSAVTGY 439 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + +G ++R + + + + Y L ++ Sbjct: 440 SREEVVGRTVTSLIGSREMRRQYQMIRQELDGSGSWQGELIETRKSGELYPQWLQLNLVR 499 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 ++ R + D LT L N ++ + Sbjct: 500 DASGRPSHIVGFFADLTARREAEERLRYLSHYDELTGLANRSLFKERLHEASQRARQSGR 559 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G + +R + R L + E + + +L G E ++L Sbjct: 560 SIALVHIDLDRFKLLNDSLGHEVADQLLRQMSRRLTQAVPEADCIARLSGDEFAILLDAY 619 Query: 409 ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + L + + L ++ + L + + L+ Q + + + Sbjct: 620 GSLSSLARVASRLLAKLRLPMDVGGHELVVSASLGISLLPDYAREIGALISQANMAVQHA 679 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEI 522 + + T +++ L N +R A+++G L ++ QP N + + + Sbjct: 680 KHLGGN-TFQFFTDNLQACTLERLQLENQLRKAIEEGQLEVFYQPKLNLADDQLNAAEAL 738 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 + G++ P +F+ L + L A VL + R SVN+ Sbjct: 739 VRWRHPQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQWQQQGLAEIRVSVNISV 798 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L Q N+ + ++ + ++PQ + LE+TE Q N +S + QL + G ++AIDD Sbjct: 799 YQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTFRQLRELGVKLAIDD 858 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR +KID F++D+ DA I R+I +A + L VVAE VET Sbjct: 859 FGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKVVAEGVET 918 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q Q L +QGYLI RP A Sbjct: 919 QAQMDFLKSQNCDEIQGYLISRPVEAA 945 >UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V122_9PROT Length = 995 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 88/485 (18%), Positives = 183/485 (37%), Gaps = 56/485 (11%) Query: 283 QGVETEYSLAFILAV---LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 Y + ++ + + + + A D LT + Sbjct: 517 HKDGHIYPKNLTITAVKNILGETTEYVSIFSDISERKRAEEEIRNLAFYDVLT-----QL 571 Query: 340 LEQ-------------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 + + + + L +D + ++ G + + + Sbjct: 572 PNRRLLLDRLHLALSVSARSGSYGAVLFLDMDRFKRLNDTLGHGCGDLLLIEVAERIRFC 631 Query: 387 MQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 ++E + + + G E +++L E + + + S Sbjct: 632 VREVDTVARFGGDEFVILLEEVGKNADEASKKAALIAEKIRAALSVPYKIKEHEYHSSPS 691 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + GN ++ LL ++ A+ + ++ +++ L + A Sbjct: 692 IGVNLYCGNGNAVEDLLKHADMAMYEAKESGRN-AVRFFDPVMQHSVSERASLEADLHRA 750 Query: 499 L-------------DQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + D G + +L + G+++P +F+PL + Sbjct: 751 VPDQQLQLYYQIQVDSNQ-----------RSLGAEALLRWIHPTRGMVSPAQFIPLAEES 799 Query: 546 NLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL++ + LA + +VN+ Q++ ++ R+ + + + Sbjct: 800 ILILELGDWVLDAACRQLAIWSEADLMRHLTLAVNVSGKQFKQRDFVEKVARILQVHQVD 859 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + LE+TE ++ + ++ L R+++DDFGTGY++ LK+L D IKID Sbjct: 860 ASRLKLELTESVVLNDVTDVISKMQALKALRVRLSMDDFGTGYSSLSYLKQLPLDQIKID 919 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV+D+ + DA++V++I D+AK L+V+AE VET+ Q+ LL +LG QGYL + Sbjct: 920 QSFVRDMTFDQNDAVMVQTIIDMAKNFGLNVIAEGVETEAQKLLLEQLGCLNYQGYLFSK 979 Query: 724 PQPLA 728 P P+A Sbjct: 980 PLPIA 984 >UniRef50_C6P3U3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3U3_9PROT Length = 600 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 95/438 (21%), Positives = 179/438 (40%), Gaps = 41/438 (9%) Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 + A D LT LPN + + L +D + ++ +G + Sbjct: 159 QIKRIAHYDSLTALPNRLLFLDRLDQEVARANRDDQMVAVLSLDLDRFKKVNESFGHPVG 218 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR----QIHW 428 ++++ + L ++ + + ++ E +VL+G + + + I Sbjct: 219 DQLLQTVAKKLSSQIRACDTVARIADDEFAIVLTGVKATHAAGEVAQKILDSFAHSPISI 278 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 +++ + + + + LL Q+ ++ + ++ Sbjct: 279 SDSEVFITLSIGISIYPVDGVNTTALLKSADTALHQAKREGRN-NFQYYTVQMNATSWQR 337 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L +R AL + + L+ QP + + G + +L + G++TP +F+PL+ + Sbjct: 338 LKLETELRQALARNEFELHYQPKVDMDCNKIVGMEALLRWQSAERGLVTPAEFIPLLEET 397 Query: 546 NLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL K +VNL L Q + AG ++++ + + + P Sbjct: 398 GLILPVGEWVLREACKQARAWQDAGIPDVHIAVNLSSLQFRQPDFAGSVLKIMQEHGLDP 457 Query: 605 QAVILEITEEQAF-------------SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 A N ++ + LH+ G R +IDDFGTGY++ Sbjct: 458 -----------AMNGIELELTESLLLDNVARTIDTLNTLHEAGIRFSIDDFGTGYSSLSY 506 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR +KID FV+D+ +N D IV +I L ++ LSV+AE VET +Q A L ++ Sbjct: 507 LKRFPISSLKIDQSFVQDLSSNRDDESIVSAIIALGRSLGLSVIAEGVETAEQSAQLRRM 566 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGYL RP P+A+ Sbjct: 567 GCDGMQGYLFSRPVPVAE 584 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 607 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 94/443 (21%), Positives = 180/443 (40%), Gaps = 16/443 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGK 350 + L + + + + + QA D LT LPN L+ A + Sbjct: 678 AGVTKHYLALKQDVTQYKQQEEKILHQAHYDSLTGLPNRLLSLDRLSQMLKDAHRAKNNV 737 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D+ + ++ G + + L ++E++ + +L G E +++LS Sbjct: 738 AVLFLDLDDFKKVNDTMGHSVGDELLIQAAVRLKNTIRESDVVGRLGGDEFIIILSNINE 797 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++ + + L + N L + + E + LL Q S Sbjct: 798 PIEVEIIASKLLEQFYQPFRLENRELVSTISIGIALYPLDSEDPKELLRQADSAMYHSKD 857 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + ++ +++ + +R+AL Q + +Y QP + ++ G + +L Sbjct: 858 RGRN-TYNFYTHQMNHDMDRRLKIEEQLRSALKQKEFEVYFQPFVDIKSRKIIGAEALLR 916 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 G +TPD+F+P+ Q L V+E + ++N+ P Sbjct: 917 WNNALLGQVTPDEFIPIAEQTGLIVSIGQYVIEVAFATAKKWQQTYNPYFKIAINVSPKQ 976 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + ++ I + LEITE S+ N+ ++ G I++DDFG Sbjct: 977 FRENTFVDMLNIQLDKHQIHASTIELEITEGVLLSSDAVIDSNLISINDIGVSISMDDFG 1036 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L+ + +K+D F+ DI + D +V + + +L+VVAE VET++ Sbjct: 1037 TGYSSLSYLRSYPFNTLKVDKSFINDITVDPGDLELVGAAIAMGHGLNLTVVAEGVETEE 1096 Query: 704 QQALLHKLGVQYLQGYLIGRPQP 726 Q LL+ L Y QGYL +P P Sbjct: 1097 QYHLLNALKCDYGQGYLFSKPLP 1119 >UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07PV4_RHOP5 Length = 928 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 96/474 (20%), Positives = 175/474 (36%), Gaps = 19/474 (4%) Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 ++ +L S+ + L + L M + + R A Sbjct: 444 SIRRNLADGKISRYLLETGDGRSIESVTKPLP--TGGWLVMTEDVTQRRLYDERIAHMAH 501 Query: 328 TDPLTLLPNFRALEQAPEQEA-------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN + E + + ID + ++ G + ++ + Sbjct: 502 YDALTDLPNRVLFHERLESALDAREPDDQLAVFYIDIDQFKSVNDSLGHSIGDELLKIVA 561 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 L + + ++ G E ++ + +V + + L Sbjct: 562 DRLRGCLAATDFAARIGGDEFAIIQTAVAKATDTTDLVERIYAAIRKPYDCAGHLLTADA 621 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + L LL + A E + + + +R Sbjct: 622 SIGIALAPQHGANLDQLLKNADLAMYGAKAEGR-RTYRFFEPAMEARVIALRTMEIDLRQ 680 Query: 498 ALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A+ G +Y QP + + G + +L G+++P +F+P+ + L + Sbjct: 681 AIADGGFEIYYQPQLRLCDDKVTGCEALLRWRHPVRGMISPAEFIPVAEETGLINQLGEW 740 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 VL P + SVN+ P+ + A ++ + + LEITE Sbjct: 741 VLVESCAEAVKWPG---DVKVSVNVSPVQFGSEGFALKVAAALANSGLPAHRLELEITEA 797 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + E+++ + Q+ G IA+DDFGTGY++ L+R D IKID F+K+I Sbjct: 798 VLIRDDEAALTMLHQIRALGVGIALDDFGTGYSSLSYLRRFPFDKIKIDRSFIKNIEDAN 857 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A IV+++ D+A A+ ++ AE VET+ Q L +LG +QGYL P P + Sbjct: 858 GSAHIVKAVVDIAAAQRMTTTAEGVETEGQLNELRRLGCSEMQGYLYSPPVPAS 911 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 107/577 (18%), Positives = 205/577 (35%), Gaps = 30/577 (5%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 Y R+ ++ +R +++ L V + L N + Sbjct: 495 GRQATYRGRRVRITAMRDVTERKRAERELREAQEQYRRLVEQLPAVVYIDRLDETSSNVY 554 Query: 239 IAGYLVPVFF------IIFTLGVGKLRYP------FLNLTWAVSTLCLLNYNQNFLQGVE 286 + +F ++ +P A + L + Sbjct: 555 SSPQTEKIFGYSPQEWASDPEMFPRVLHPADRESVLAAHARANARGEPLELEYRLIARDG 614 Query: 287 TEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + VL ++ + L R A DPLT LPN Sbjct: 615 RVVWVRDSSIVLRDAEGNPRWRQGLMVDITEQKNLEARLVHLAFHDPLTGLPNRALFMDR 674 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 E + + +DN +F++ G + + R L + + + + Sbjct: 675 LEHALARAGRSGDVLAVLFIDLDNFKFVNDSLGHEAGDRLLALVARRLSGATRPGDTVAR 734 Query: 396 LPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E ++L G G + + L + +++ Sbjct: 735 LGGDEFTVLLEGIADGGEAARVAGRVAEVLREPFRVAGRELFVSASVGISVSTAGSGSVE 794 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ ++ + +S ++ L N +R A+ + +L LY QP+ Sbjct: 795 ELMRGADLAMYEAKREGKDR-YRVFDFGMSRTAHDRLRLENDLRRAVGRDELRLYYQPVV 853 Query: 513 ---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + ++ +L GI+ PD+F+PL + + +VLE A Sbjct: 854 RLGDGRVVAFEALLRWEHPRRGILLPDRFVPLAEETGMIVGIGRRVLELACSRAAGWRRQ 913 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + SVN+ L++ + + R+ +R + P+ ++LE+TE A + +++ Sbjct: 914 EPSLAVSVNISARQLVRPDFVEEVGRILQRTGLEPEGLVLEVTESAAMDEPGEAARALQR 973 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G R+A+DDFGTGY++ L+RL +KID FV+ + ++ ++V + L++ Sbjct: 974 LRERGVRLALDDFGTGYSSLSYLRRLPVCFLKIDRSFVEGLGGDSGSGVLVGGVIALSRE 1033 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 VAE +ET Q L +LG + QGY P P Sbjct: 1034 LGFEPVAEGIETPGQLERLLELGCELGQGYYFASPMP 1070 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 93/466 (19%), Positives = 176/466 (37%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + Y L+V+ L + + + A DPLT LPN Sbjct: 360 RADGEIYPQWATLSVVKDEHGQPTHYLAVFTDLSKLKHREEELEHLAHYDPLTDLPNRLL 419 Query: 338 ------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 ALE+A Q + + +D + ++ G + + + L ++ + Sbjct: 420 LRSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSLGHALGDELLLGVTARLKARLRHED 479 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGN 447 + +L E + +L + + L + + F + Sbjct: 480 VVGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGHETYARASIGISVFPQD 539 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL ++ + +++ + +R AL QG+L+L+ Sbjct: 540 GKGANDLLRSADVAMHRAKQRGGNQ-YAFYTGELGHGALQRLEMETALRRALIQGELVLH 598 Query: 508 AQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + +L + G++ P +F+PL + L V+ + + Sbjct: 599 YQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEETGLIVPIGAWVINETCRQIR 658 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ + + +++ + P+ + LE+TE + E + Sbjct: 659 AWAEAGQPSVMVAVNVSARQFAGGELEAVLATALRKHAVDPRMLGLELTESMLMAAPEQA 718 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 ++ L + G +A+DDFGTGY++ L R D +KID F+ IV++ A I ++ Sbjct: 719 TERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKIDRSFITHIVSDPKAANIATAV 778 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA +L VVAE VET+ Q + L K +QGYL P P + Sbjct: 779 IALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFSAPVPADE 824 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 112/493 (22%), Positives = 196/493 (39%), Gaps = 31/493 (6%) Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 L P + + + + +Y + F A V + V + Sbjct: 713 AAWLGTPLRSRGKVIGAMVVQHYEDS-----------EFFSARDAELMVPVAEQVAVAIE 761 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSR 365 + AL DPLT LPN L E+ + L +D +F++ Sbjct: 762 RKQGEEMLTHLALHDPLTGLPNRALLLDRIERAIQRRRRNDSYRFAVLMLDLDRFKFIND 821 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 +G + + + R + P+++ + + +L G E L+L ++ R+ + L + Sbjct: 822 SHGHTTGDNLLVEVARRMRPVVRAGDTVARLGGDEFALLLEDVDSPRRIVQITRRLLAAL 881 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 R + + +T LL Q+ A + + Sbjct: 882 ERPVRMGAKVVRTSASIGMVLRTQGYDTADALLRDADIAMYQAKAQGKGR-FRVFNQSMH 940 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNK-EGEGYDEILARLKYDGGIMTPDKFL 539 T + + L + A+ + L L QP+ + G++ ++ G + P +F+ Sbjct: 941 RHTMEMMTLEGDLSMAMRRKQLYLEYQPVLAVDGARLLGFEALVRWRHPTEGAVPPARFI 1000 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRL 596 P+ + L R VLE LA SVNL Q N+ GR+ R+ Sbjct: 1001 PMAEETGLILRIGQWVLEQAAATLARWRATLPGAHDLYVSVNLSARQASQPNLTGRVARI 1060 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P+A+ LEITE + + ++ +E L + G I IDDFGTGY++ L+R Sbjct: 1061 LSDTGLPPEALKLEITETAIMKDPDGALQRLEALRRLGVGIGIDDFGTGYSSLAYLQRFP 1120 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +K+D FV + + + IVR++ L ++ L VVAE VET +Q A++ +LG + Sbjct: 1121 VDTLKVDRSFVSAVAGDAENREIVRTVVTLGRSLGLHVVAEGVETAEQFAIVAELGCHSV 1180 Query: 717 QGYLIGRPQPLAD 729 QGY RP + Sbjct: 1181 QGYHFSRPV-AEE 1192 >UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBP4_CHRVI Length = 648 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 99/460 (21%), Positives = 186/460 (40%), Gaps = 23/460 (5%) Query: 292 AFILAVLISFSVCLLYMVRIYHR-------SEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 +A L ++ + + + R A D LT LPN + Sbjct: 180 IASIASLAEGALHYVCAIIDRTEAVRQRQRLREASERLDYLAHHDALTGLPNRAYFQSRL 239 Query: 345 EQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 EQ + + L +D + ++ G + + + L +++ + + +L Sbjct: 240 EQCLQRAKRYQRRFALLFLDLDRFKEVNDTLGHHVGDALLCRVAEILSAQIRDVDTIARL 299 Query: 397 PGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++L + H V+ + SR + + + + L+ Sbjct: 300 GGDEFVIILEDISEPRFIMHFVDRVMDDFSRPLRLEGREFFVTVSVGISLYPDDGLDLET 359 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L+ + Q+ E +S +++ L + +R A+ + + LY QP + Sbjct: 360 LVRRADIAMYQTKKSGRN-GFSFFEPTMSAGAIERLHLEHDLRLAMQREEFELYYQPQVD 418 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 E G + + G++ P F+P+ L L++LE + + Sbjct: 419 LITGELMGVEALCRWRHPQLGVLLPGLFIPMAEDLGLIDELGLRILELGCRQMVAWDASG 478 Query: 571 KG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 PR +VNL L + + ++ + +R + P+ + LE+TE + +AE ++ + Sbjct: 479 LNVPRLAVNLSVRELERLQLPAQVAEILERTGLDPRRLELEVTESKLMRHAEMAILALNA 538 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G +AIDDFGTGY++ LKRL + +KID F++ + + D I R+I LA Sbjct: 539 LRALGVTLAIDDFGTGYSSLSYLKRLPLNRLKIDRSFIEGLTHDVNDDSIARAIIALAHT 598 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE +E ++Q L G QGYL RP + Sbjct: 599 LGLEVLAEGIEAREQANFLFGEGCLQGQGYLYSRPMIAEE 638 >UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BZW1_DELAS Length = 1120 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 94/445 (21%), Positives = 172/445 (38%), Gaps = 20/445 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 L +++ + + A D LT LPN R L + + Sbjct: 624 DEGCLLILQDQSQRKTAEEEIRRLAFYDALTGLPNRRLLVDRLQQALASSRRRGRCGAVM 683 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--ETE 411 L +DN + + GL + +R I L + L + G + +++L ++ Sbjct: 684 LLDVDNFKAFNDSLGLELGDVLLRMIAERLAQSLGREATLARHSGDDFVVLLEDLGKDSM 743 Query: 412 GRLQHMVNILNSRQIHWN------NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + + F + + +L + Q+ Sbjct: 744 HAASKLEGEVQRMRSLLLQPLQLSGQSCHITLSIGASLFGEQELSADEVLRRAEMAMYQA 803 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKEGEGYDEILA 524 L + + + + +R L + +LY QP N G + +L Sbjct: 804 KGMGRN-TLQFFDPQLQAVLRSRTAMEQEMREGLVRSQFVLYYQPQVANGRIVGAEGLLR 862 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPL 582 G++ P F+ L + L + VL + LA + +VN+ P Sbjct: 863 WNHPREGLVPPSLFVSLAEETGLIQQLGEWVLGEACRQLAQWAAEPDMACLMLAVNVSPR 922 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q ++++ K + +P+ + LE+TE ++ + + + L G ++DDF Sbjct: 923 QFHQARFVEQVLQALKEHGANPRLLKLELTESLLLADVDDTAAKMATLKAHGVGFSLDDF 982 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKRL D +KID FV+D++++ DA I R+I L + L V+AE VET+ Sbjct: 983 GTGYSSLAYLKRLPLDQLKIDRSFVRDVLSDPNDAAIARTIVALGTSLGLQVIAEGVETE 1042 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 Q+ L QGYL+ P P+ Sbjct: 1043 AQRQFLEDQHCHAWQGYLLSPPVPV 1067 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 108/444 (24%), Positives = 186/444 (41%), Gaps = 16/444 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKS 351 + M + R A D LT LPN +AL+ A E + Sbjct: 271 GRVTHYIGMFIDITDLKNSQSRLENLAHYDVLTGLPNRLLLGYRLRQALDDAQRHERLAA 330 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 C L +DN + ++ H+G + I R L ++ N+ + +L G E +++L+ + Sbjct: 331 VCFLDLDNFKLVNDHHGHETGDRLLIDIGRRLRDTLRSNDTVARLGGDEFVILLNDLRNQ 390 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 L +++ L + + + + + + + LL Q+ Sbjct: 391 EELDNVLVRLLDGVAHPVRIDALQIVITVSVGVTIYPLDDHDPDTLLRHADQAMYQAKQM 450 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + + + L IR AL G+ LY QP + + G + ++ Sbjct: 451 GRNR-YQLFDPEAANAMQSRHRELERIRQALQHGEFQLYYQPKVDMRLGQVVGMEALIRW 509 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 + G++ P +FLPLI L VL L + + + SVN+ Sbjct: 510 RHPERGLVPPLQFLPLIEASPLIVEVGEWVLHEALGQIRQWCAEGRPLTISVNIAAHHFQ 569 Query: 586 QKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q++ R+ + + +P+ + LEI E A + +S + G R A+DDFGT Sbjct: 570 QRDFVLRLQTILAEHPEATPRLLELEILESAALEDIQSVRGIMTACQAMGVRFALDDFGT 629 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK+L A+ +KID FV++++ ++ D I+ + LAK V+AE VET +Q Sbjct: 630 GYSSLSYLKQLPAETLKIDQSFVRNMLEDSEDLAIIEGVIGLAKVFRKEVIAEGVETPEQ 689 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 LL + G + QGY IGRP P Sbjct: 690 GLLLMRFGCDHAQGYGIGRPMPAE 713 >UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LR02_DESBD Length = 1158 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 115/523 (21%), Positives = 199/523 (38%), Gaps = 32/523 (6%) Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG------------ 284 D + P F +F L F L S + L G Sbjct: 622 DGAPMDINPSFTSLFGYARSDLHALFEMLLHPDSLDESYAFVSTVLSGTSVSTETQRRTK 681 Query: 285 VETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 ++ + L ++ + + QAL D LT LPN Sbjct: 682 DGRIIPVSMLGYPYVLDGTISGAFFIFSDISERKNYEAQLTRQALRDNLTGLPNRVLFMD 741 Query: 343 AP-----EQEA----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 Q+ + + +D+ + ++ G H ++ + L ++ + + Sbjct: 742 RLNRAMTRQQRNGEYRFAVLMIDLDSFKRVNDTLGHQAGDHLLQEVAARLTHCLRTMDTV 801 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQET 450 ++ G E ++L + + L + + + + + + Sbjct: 802 ARMGGDEFAVLLEDFQNNHEAIGITRRLLDTIRQPLKIQDRDVLVSASVGVVLQTARYTS 861 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 LL +S + + Q + V L N +R AL + + L+ QP Sbjct: 862 PNDLLRDADISMYRSKELGKNQ-FKVFSKSMYEQVVQTVQLENDLRQALVEDEFELFFQP 920 Query: 511 IRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 I G G++ ++ G + P +F+P+ + L V+ + LA Sbjct: 921 IYALSGQKLRGFEALIRWNHPQRGHLPPGEFIPVAEETGLVTEIGKWVMRRGCRVLAGWQ 980 Query: 568 CD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 S+NL P LLQ ++ + L + + + LEITE N E + Sbjct: 981 SQFPGLDISLSLNLSPKDLLQASLVPVLTELLHETGLDARHLKLEITETAVMDNPEQATS 1040 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +E+L K GF+IA+DDFGTGY++ L+RL DI+KID FV+ ++ N + I+++I Sbjct: 1041 RLERLQKMGFQIAMDDFGTGYSSLSYLQRLPIDILKIDRSFVQTMLENPNNLEIIKAIIG 1100 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L K L +VAE VET+QQ L +LG QG+L+GRP Sbjct: 1101 LGKILDLRIVAEGVETRQQLETLQELGCDLAQGFLLGRPMSKE 1143 >UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYI1_BACS4 Length = 774 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 103/505 (20%), Positives = 194/505 (38%), Gaps = 34/505 (6%) Query: 245 PVFFIIFTLGVGKLRY------PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 F+I ++ Y PF+NL AV + NY + L + Sbjct: 280 MALFVIVSITFFTYIYARKTLEPFVNLYDAVDKVAEGNYTKT----------LDVNVKDY 329 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGK 350 ++ + H + +A D LT LPN +EQ EQE Sbjct: 330 PEMKNLIVRFNEMVHNFNQSRKEVEYRANHDILTGLPNRYHIEQLLEQEIVTCDENDQSL 389 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G + + L + EN + +L G E L++ Sbjct: 390 ALMFMDLDRFKILNDTMGHQIGDQLLIQTAIRLQQHVCENCTVGRLGGDEFLILSKDASI 449 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E + ++ + + N+ + + +T ++ + Sbjct: 450 EK-VSNIAKKILKDMANPFIINSKEFFTSPSIGISVYPKDGQTKDDIIKHADTAMYVAKE 508 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + +K+ ++ N +R AL + LLY QP + + G + ++ Sbjct: 509 NGGN-NYQFYTPEPTNLLSKKYIIENDLRKALKNEEFLLYYQPQVDLKSGDLVGLEALIR 567 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT 583 G++ P F+P+ + +++ + + +VN+ P Sbjct: 568 WQHPKLGLIPPMDFIPIAEETGYINHIGKWLIKEACRQNKQWQQNGSFYIPVAVNVSPWQ 627 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 KN I ++ P+ + LEITE + ++ + Q+ + G ++AIDDFG Sbjct: 628 FRDKNFVENIKAALDETNLDPKYLELEITESM-MHHFIDTIDKVHQVKEMGIKVAIDDFG 686 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ + +L D +KID F++D++TN A IV++I DL L+ +AE VE ++ Sbjct: 687 TGYSSLNAIDQLPIDTLKIDRSFIRDMITNDSKAAIVKTIIDLGNNLHLNTIAEGVEYEE 746 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q L QGYL +P P Sbjct: 747 QATFLANQDCVKAQGYLFSKPLPPE 771 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 92/448 (20%), Positives = 186/448 (41%), Gaps = 22/448 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKS 351 L + + + + + QA D LT LPN + +A + + Sbjct: 431 GEVRHFLAVKQDVTKQKAQEEKILHQAHFDGLTELPNRFLAMHRLETMMHEAKRNQHQIA 490 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ G M + + L +++++ + +L G E +++++ E Sbjct: 491 VLFLDMDDFKKVNDTLGHDMGDKILVEAAKRLQGSVRDSDTIGRLGGDEFIVLINHLERP 550 Query: 412 GRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + L + + + + + + G+ T LL S A Sbjct: 551 EQALPIAQNLLQQFRSSLTIDGRDILLTMSIGIALYPGDGTTPSELLRNADSAMYHSKAA 610 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILAR 525 + + ++ + +++ L + ALD+ +L L QP+ + + G + +L Sbjct: 611 GRN-SFHFYTQEMNIEANRRLQLEEQLHNALDRNELRLLYQPVVDLKTRKIVGAEALLRW 669 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 + G ++P++F+P+ L VL+ L+ + ++NL P Sbjct: 670 DSKELGAISPEEFIPVAEHTGLIVEIGKFVLDDALRTTSRWIKTFIPDFHIAINLSPRQF 729 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAF---SNAESSMYNIEQLHKFGFRIAIDD 641 ++ I Y + + + LEITE ++ E ++ + Q G I++DD Sbjct: 730 RDPHLIDNIESFVNSYGLEGRNLELEITEGVLMSQHADVEEAIAKLTQ---KGISISMDD 786 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+ +I+K+D F+ DI + D +V + D+A L V+AE VET Sbjct: 787 FGTGYSSLSYLRSYPFNILKVDRSFINDISVDAADLELVNASIDMAHGLGLKVIAEGVET 846 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q ALL + QGY +P P + Sbjct: 847 EEQTALLLRKNCDMAQGYYFSKPIPADE 874 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 84/310 (27%), Gaps = 36/310 (11%) Query: 24 LIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSF 83 L+ ++ ++P +I + W V++S+ ++ + + ++ + L + Sbjct: 47 LLGMAVMLTPWELIPGVFFDARW----VLISLCGLY-FGVIPTLIAVVMTVTLRLYQ--- 98 Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 + +GS + + + LT W RL++LGL I + C M Sbjct: 99 GGAGIYVGSAVIICSALIGLGWRAYIEKHNKALT----WWRLYFLGLSVQITVLCLM--- 151 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 F P + A A ++ I ML + A+ Sbjct: 152 ---FFMPEHLRYKIIAAIAPTILIFYP-------IGTMLLGMILSRQEERRLAERELHIS 201 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 + L + + L G+ + Sbjct: 202 RQILNRERGLLRGLIDALPDHIFIKDKEGKYLGCNKAFQSFTGHQEADLIGKTDQDFSES 261 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFL---QGVETEYSLAFILAVLISFSV---CLLYMVRIY 312 + + + + + L + + L LA + ++ + R Sbjct: 262 NHAITDKSDTLQVINNLLPINREAWTHEQDGSPILLESQLAPFLDMDGEPQGIVGISRDI 321 Query: 313 HRSEWLNRRW 322 R Sbjct: 322 TEKRKAEERI 331 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 95/444 (21%), Positives = 180/444 (40%), Gaps = 18/444 (4%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + +S +V + + R R A DPLT + N L++ Sbjct: 303 SEFVSIAVHMAGIA--ISRHR-AEARIGFLADHDPLTGMANRALLDRKLTFAMQTADSTR 359 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + L +DN + ++ G + ++ + + L + L ++ G E +++L Sbjct: 360 SEVALAFLDLDNFKLVNDSLGHSVGDQLLKIVASRISELTSDQGSLARIGGDEFVIILEQ 419 Query: 408 PETEGRLQHM--VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + E L + + +R I N+ L + + + T LL ++ Sbjct: 420 MDLESCLDRLSAIREAVTRPIVLNDIELRVTCSIGVASYPSHGSTAGELLASADMAMYRA 479 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + ++ K++ + +R AL + + +L+ QP + + + Sbjct: 480 KELGRD-GIALFTSAMTAIVRKKLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEAL 538 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMP 581 + G++ P F+ L + +L VL++ + + R SVN+ Sbjct: 539 IRWNHSSEGLVYPGDFIALAEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSA 598 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 +K + + + P + LEITE + S+ +++L G ++A+DD Sbjct: 599 RQFQEKRLIETVATALSESGLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDD 658 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR +KID F+ DI + D I +I LA+ L V+AE VET Sbjct: 659 FGTGYSSLSALKRFPLSRLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVET 718 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQ 725 ++Q L + G +QGYL RP Sbjct: 719 EEQARFLVESGCNEIQGYLFSRPV 742 >UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KC5_SACD2 Length = 823 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 112/564 (19%), Positives = 213/564 (37%), Gaps = 40/564 (7%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLL---LLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 ++ + E R TL+ A + + L + + A P Sbjct: 251 LAKENEALVVSESRFRTLAESAPIGIFLRNENFETLYVNDRWCAITGQPHGCSRQEYLKS 310 Query: 257 KLRYPF------LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-------SFSV 303 Y + + S + Y + + ++ + + Sbjct: 311 ISDYDLRNYEGMIEGLRSGSVGQTIEYRYRAPGRLNDHILMEYVTPLEVKEGVSGEHQVR 370 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCL 355 + V + A DPLT LPN R + A E+++ + + Sbjct: 371 GYVGSVLDVTELKNAQHELEKLAYYDPLTHLPNRRYFKDYLVKQLQLAKEEDSIMAVLLV 430 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +DN + ++ G + + + + + + ++ G E LVL + ++ Sbjct: 431 DLDNFKRINDTLGHDAGDILLSVLAGRIKQRLHSQDLVARMGGDEFYLVLRNLSSLAEVE 490 Query: 416 HM---VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + V + + I N +++ + N +T + L+ ++ Sbjct: 491 KITKRVRSVLASPIRIKNHFVEITASIGVASYPENCDTPEELMRNADIALYKAKGDGRNR 550 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG---YDEILARLKYD 529 + Q ++ L + +R A+ +Y QP + + + ++ + Sbjct: 551 V-AYFSAELDSQLRDKMRLESKLRQAVSCEAFEIYIQPQYDYKTSKFRWAEVLIRWEDPE 609 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR------FSVNLMPLT 583 G + PDKF+ L + + D VL + + R S+NL Sbjct: 610 EGFIPPDKFIKLAEETGIINDIDQWVLRATC---KLWAEHGEALRAIGIEGVSMNLSARQ 666 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 K + + +F+ Y I+P + EITE N E ++ +E+L G RI+IDDFG Sbjct: 667 FYSKTLFAYVEAVFEEYGINPSCISFEITESMVIENIEGAIETMERLRNIGSRISIDDFG 726 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL D +KID F+ DI +T D I +I +A+ +LSV+AE +ET++ Sbjct: 727 TGYSSLSYLKRLPIDSLKIDRSFIMDIPGDTNDVAITSAIIAMAEKLNLSVIAEGIETKE 786 Query: 704 QQALLHKLGVQYLQGYLIGRPQPL 727 Q L + G ++QGY +P P+ Sbjct: 787 QCEFLVEQGCFHMQGYYFAKPAPV 810 >UniRef50_D1B584 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B584_SULD5 Length = 961 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 107/596 (17%), Positives = 226/596 (37%), Gaps = 39/596 (6%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS-------W 219 + ++SL LI M+F ++ + + ++ TL W Sbjct: 352 LVIISLVIMCLIIVMMFLISVKLRSLLARYENHLLLNNKQIKEQKMVFETLYQKSADGIW 411 Query: 220 LAALSV-------LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP-FLNLTWAVST 271 L + ++ + T + I L + G ++N + Sbjct: 412 LLKEGLFIDCNEAIMKMFKTTDKQKLINVSLADLSPEFQPDGQSSYEKSRWMNSIASKEG 471 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR-------WHL 324 + + G S+ ++ + + R + L Sbjct: 472 VHKFEWYAKACDGTLIWISVVMTTVMMNKGKIQHCSI-RDITARKALEEENKKQKKLLMH 530 Query: 325 QALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCI 376 Q D LT LPN L+ Q K+ + +D + ++ G + Sbjct: 531 QVEHDILTGLPNRNLLQDRLTQAIKKASRDGKVLGVMFVDVDKFKNINDSLGHDAGDMLL 590 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 ++I + + ++E + + +L G E +++L G + + + L + N Sbjct: 591 KTIAKRMQHSIRETDTVARLSGDEFIVLLDGCKDVNDIFVAIKKLINAFQEPFIFGNESF 650 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + + E LL ++ + ++ ++ +T + + + Sbjct: 651 KVTMSIGVSVYPNDGELASKLLKNADIAMYKAKSQGRNR-YIFFDQEMNQETNEHLEVEK 709 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 ++ AL + +L+ QP N + G++ +L G+ P F+ + + L Sbjct: 710 SLHKALVNQEFVLHYQPQVNLKSGKIIGFEALLRWKHPKRGLTAPGYFIHVAEESELIIE 769 Query: 551 FDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 V++ +++ L P + ++N+ L ++ I++ K P+ + L Sbjct: 770 IGNWVIKEVMRQLKEWHDKGLRPGKVAINIAGKQLESNHLIAFILQNLKESGCRPEWIEL 829 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EI E +A S+ +++ + G I+IDDFGTG+++ LK L +KID FV++ Sbjct: 830 EIVERFIMKDATKSIALLKRFRELGLDISIDDFGTGHSSLAYLKELPITKLKIDQSFVQN 889 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + ++ D I R+I +L + L V+AE VET+ Q+ L+H G +QGY+ +P Sbjct: 890 LENSSEDRAIARTIIELGRGLGLVVLAEGVETKAQKELIHSSGCDLIQGYVFSKPV 945 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 116/586 (19%), Positives = 215/586 (36%), Gaps = 43/586 (7%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA---LSVLLLLL 230 I L L++ + + L + Sbjct: 235 LGQTISAPLLKKALGTGKGEELVPTLYQEADSLLATRRLHEGLLLIGILPKEELLEESQR 294 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + G +V + F + + P L AV + N E Sbjct: 295 LGNSVGWIVLGTIVLLIFALLISMNVLMVRPLKQLMGAVREIGRGNLAPTIALSTSDELG 354 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-RA-------LEQ 342 + ++ ++ E R A D LT LPN RA + Sbjct: 355 KLGLSFQEMAGNL------------EKSRVRVERLAYHDSLTGLPNRFRAHETLRCMISL 402 Query: 343 APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK---------- 392 A + + L +DN + ++ G + + + L +++ + Sbjct: 403 AHRESRRMAVLFLDLDNFKRVNDTLGHQVGDQLLMEMAIRLQVVLRAEDVIHQEVSQNTL 462 Query: 393 --LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 L +L G E +++LS + + + + ++N + G F + Sbjct: 463 DVLARLGGDEFVVLLSNVSSSRDAAKVASRILDIMKLPFYFNENEIYSGCSIGISLFPSD 522 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L+ + Q+ + + + + L +R AL +L+LY Sbjct: 523 GSDVDDLIKRADAAMYQAKSQGRN-NFQFYSASYNLAALEHISLEGRLRRALKNNELVLY 581 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + G + +L GI+ PD+F+P+ + L VL + L+ Sbjct: 582 YQPLVQARTGKIVGLEALLRWNDPLDGIIPPDRFIPVAEESGLILPLGEWVLREAGRQLS 641 Query: 565 THPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 T SVN+ + L ++++ + ++ K + P + LEITE Sbjct: 642 TWHAAGFTDACVSVNVSAIQLQRQDLVTIVDQVLKDNGLRPWQLELEITETALMRIRPEV 701 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++ + + G I++DDFGTGY++ L+ L +KID FV+D++ + DA IV ++ Sbjct: 702 IGDLNAMRRKGVTISLDDFGTGYSSLSLLQELPIGKLKIDKSFVRDMLVDPKDAAIVSAV 761 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AK+ L AE VET +Q A L + G LQGYL+ RP P+A+ Sbjct: 762 LFIAKSLGLQSTAEGVETPEQAARLAEEGCDQLQGYLLCRPLPVAE 807 >UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAJ7_CHRVI Length = 1030 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 104/523 (19%), Positives = 195/523 (37%), Gaps = 15/523 (2%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 + G + I + + Sbjct: 483 LLEINPAAARTLGCSRRAVLGRPLADILIPDEARPAYDEALAQGFVTEGRFVVNQRSHTI 542 Query: 281 FLQGVETEYSLAFILAVLISF-SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + +A + S + R R + RR H A D LT L N + Sbjct: 543 LKRISGETFPAELTIARVKSGPYPEFNFHARDITRQREVQRRLHQLAHYDGLTGLANRQF 602 Query: 340 LEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 Q + A + L +D + ++ G +R++ L +++ + + Sbjct: 603 FRQNLSIHLMGPEPAQIAVLFLDLDRFKTINDTLGHAAGDQLLRTVAERLRSVLRSEDLV 662 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQET 450 + G E ++ L G + + H + +R + + + + Sbjct: 663 ARWGGDEFVVALLGVQDRDAVMHKAADIIARLAEPHPLAGRSIRVPTSIGAALYPEGGTS 722 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 L+ ++ ++ + +++ + ++++ N +R ALD+G+L L+ QP Sbjct: 723 ADLLIRNADLALYRAKSNGRGHC-QLFDPVLASEISERLEFENDLRDALDRGELELFYQP 781 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + +L G+++P F+P++ + L VL + + Sbjct: 782 QVEVGSGRIVGLEALLRWRHPGKGMVSPTVFVPILEELGLIELVGEWVLRTACRQHRVWR 841 Query: 568 CDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 PR +VN+ L+ A + R+ + AV LEITE + + + Sbjct: 842 ERGLSPPRIAVNVSGRQFLRLGFAETVERILTEEGTAVTAVELEITETVLAHDTDVCIET 901 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + +L + G IA+DDFGTGY++ LKR D +KID FV + N DA I +I L Sbjct: 902 LRRLKRLGLEIALDDFGTGYSSMSYLKRFPVDTLKIDRAFVAECDVNAEDAAICTAILSL 961 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A+ L +AE VET Q L + G Q+ QG+ RP P+ + Sbjct: 962 ARGLGLKTLAEGVETPGQLEFLRREGCQFYQGFFFRRPMPVEE 1004 >UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=30 Tax=Burkholderiaceae RepID=B2UGH6_RALPJ Length = 917 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 113/564 (20%), Positives = 201/564 (35%), Gaps = 39/564 (6%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFI-AGYLVPVFFIIFTLG 254 E+R +++ +L C P + AG + PV L Sbjct: 342 HIARDLRESEERYRLAVDNLTEGIVVQTADGTILACNPSARRILRAGSVSPVGTSHLALM 401 Query: 255 VGKLR----------YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF--ILAVLISFS 302 LR P + L L + G I+ + Sbjct: 402 RRSLREDGSEIPVNERPTRVVLATGRPLLGLTVGLELVDGDVVWVHENVLPIVRPGDNTP 461 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-----------QEAGKS 351 +L + ++ A D LT L N Q + + + Sbjct: 462 SAVLISFNDIGPARAAQQQLTFLAQRDALTGLYNRAYFSQRMQAVMEQAASQANEGHQVA 521 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G H +R + + L +++++ L +L G E +++L + Sbjct: 522 VLFLDLDGFKKVNDTAGHEAGDHLLRIVAQRLSACVRQSDTLARLGGDEFVVLLDNVRSL 581 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 G + + + ++ + T +G + + LL + + Sbjct: 582 GEAERLAKRIVHSIAQPFSTSGTEYYLGASIGIALYPEHGNDAATLLRCADAAMYNAKQN 641 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILAR 525 +S + ++ L +R AL G+L L QPI + G + +L Sbjct: 642 GRNQ-HRVYTARLSQRAQRRFQLEYHLRRALTAGELSLRFQPIVDATSMDIVGAEVLLRW 700 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL 584 + G ++P +F+P+ L VL + A +VNL P Sbjct: 701 HSTELGEVSPAEFIPVAEDAGLIGDIGEWVLAQACRQAAHWRATCMPEFFVAVNLSPRQF 760 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + I R + A+ +EITE + + M ++ L G RI+IDDFGT Sbjct: 761 G-EGLVPTISRCLTEAGLPASALEMEITEGLLMRDTAAVMPMLDALTALGIRISIDDFGT 819 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+R D +K+D FV I + +I R++ +A + ++V AE VET +Q Sbjct: 820 GYSSLSYLQRFPIDNLKVDRSFVSGIPRHRDSVVISRAVVAMAASLDMTVTAEGVETLEQ 879 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L G LQG+L G P A Sbjct: 880 AEFLQAAGCDKLQGFLFGPPMTAA 903 >UniRef50_B4RTU5 Sensory box protein n=2 Tax=Alteromonadales RepID=B4RTU5_ALTMD Length = 1510 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 102/473 (21%), Positives = 184/473 (38%), Gaps = 17/473 (3%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 W+ + + + E E ++ + + + + + A Sbjct: 1023 WSGEVESVRVNGERY----EMELNIDAV-HDEDGKISHFVGVFSDITSRKSTEKELLKLA 1077 Query: 327 LTDPLTLLPNFRALEQAPEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 DPLT LPN + + + A S CL +DN + ++ G I+ I + Sbjct: 1078 NVDPLTELPNRSFFQASHQNLVRKAAQHSLLCLDMDNFKKINDSLGHQTGDILIKQIAKR 1137 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGA 439 L + +N Y+L G E +++ + H L SR N +G Sbjct: 1138 LQRITGKNATCYRLGGDEFSILMEDNADIHTVTHYAQNLLDTLSRPFIINKQEFVLGASI 1197 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + E+ Q +L + + + ++ +Q+ + N IR + Sbjct: 1198 GIAFFPDDGESPQEMLKNADTAMYFAKNNGGN-SYQFFSGEMNQNAVRQLQIENLIRQGI 1256 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +Y QP + + + ++ GI++P +F+PL Q QVL Sbjct: 1257 KDDLFTVYYQPKVDIASGKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQIIEIGEQVL 1316 Query: 557 ESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 R +VN+ ++ RI ++ +SP + EITE Sbjct: 1317 RKACADTKRWVNQGLFSGRVAVNISAKQFELPDLDDRINKILSDVGLSPLHLECEITEGT 1376 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + E+ + + +L + G +A+DDFGTGY++ LKR + +KID F+ DI + + Sbjct: 1377 LMESPENGLQMMTRLRERGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAFIDDIAKSNV 1436 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D + +I ++A L VVAE VE + Q +L + + LQG+L RP Sbjct: 1437 DRHMAAAIINIAHNLGLKVVAEGVEEESQLDILRRYDCEMLQGFLYSRPLNAE 1489 >UniRef50_A1TMD5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TMD5_ACIAC Length = 687 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 102/458 (22%), Positives = 183/458 (39%), Gaps = 14/458 (3%) Query: 284 GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ- 342 T + + + +Y R +R A +D LT LPN L + Sbjct: 216 RTGTVIERRSVPQMSHGRPMGRVYSFRDLTLQHAAQKRIEQLAYSDVLTGLPNRLLLSRC 275 Query: 343 -------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 A Q G + + +D + ++ G + ++ + + L +++N+ L + Sbjct: 276 VASALETARAQGGGFAILFIDLDRFKIINDSLGHLFGDRVLQLVAQRLRGCLRQNDMLCR 335 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 L G E +L L + IL + + G + + ETL Sbjct: 336 LGGDEFVLHLDEGDASMAEAVACRILEEMRQPFMLDGMGFSIQCSIGIALHPRDGETLDD 395 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 L+ Q + + ++ ++ L + +R ALD+GD ++ QP Sbjct: 396 LIKQADTAMYRVKERGRG-SYGFYHPQMNADMLSRMQLEHAMRQALDRGDFAVHYQPQVE 454 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + +L G ++P F+PL + VLE ++ A Sbjct: 455 MASGRVVGAEALLRWNDPGLGAVSPGVFIPLAEESGYIVTLGAWVLEQAIREAAEWMRAG 514 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 +VN+ L Q R++ L + + + + LE+TE +A+ + L Sbjct: 515 TPLVVAVNVSALEFRQSGFVERLVALLRSHGLPASLLELELTETILLQDAQEMAQRLAAL 574 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G ++IDDFGTGY++ LK+L+ +KID FV+ + + D I+ +I + +A Sbjct: 575 AELGVGLSIDDFGTGYSSLAYLKKLRIHKLKIDQSFVRGLPDDESDRAIIEAIVHIGRAL 634 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VVAE VET QQ+ L L Y QG+L+ P Sbjct: 635 RIRVVAEGVETPQQREALQALQCHYFQGFLVAPGLPAE 672 >UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Chroococcales RepID=Q31P31_SYNE7 Length = 1047 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 110/559 (19%), Positives = 205/559 (36%), Gaps = 30/559 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFF--IIF 251 ++ A E+R L+ V L L +P + + Sbjct: 482 RKKIEAELQTSEERYRLLAENMNDLVCLHQADGTYLYVSPSAEALLGFSSEEMVGQNPYD 541 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM--- 308 AV L + + + ++ ++ + Sbjct: 542 FFHPEDCDRIRDEAHQAVLMGAELPIVYRMRKKLGGYIWFETLTKPIMDDQGVVIGLQTT 601 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QEAGKSFCCLRIDN 359 R + + + A D LT L N L + E Q + L +D Sbjct: 602 SRDVTQRIEIQNQLQYDACHDSLTGLANRNLLIERLELSLKRSKRLQNYKYAVLFLDLDR 661 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + SI + L +++ ++ +L G E ++++ +T + Sbjct: 662 FKVINDSLGHITGDQLLVSIAQKLQSIIRSHDLAARLGGDEFVVLVEDIQTFDEPIKVAE 721 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + + + E+ LL ++ + + Sbjct: 722 RILAAIQVPLELEERSIYTSTSIGIVFGSHEYESATQLLRDADTAMYRAKSRGRAR-YEV 780 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 + + Q ++ L N +R A+ + + +LY QPI + G++ ++ GI Sbjct: 781 FDSAMHSQALARLHLENDLRQAIARQEFVLYYQPIIQLQTGKITGFEALIRWQHPTEGIK 840 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIA 590 P +P+ + L D VL + L+ SVNL L ++ Sbjct: 841 LPIDLIPIAEETGLITSIDYWVLNQACRQLSEWQASYSQAADLSMSVNLSAQNLQHDHLM 900 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + + I P ++ LEITE N + ++ + +++ G I+IDDFGTGY++ Sbjct: 901 DEIQSVLQATKIKPGSLTLEITESMLIENTDQTIQLLAAINEQGIEISIDDFGTGYSSLS 960 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L +L + +K+DG FV+ I T + + IV +I L L +AE +ET +Q LL + Sbjct: 961 YLHKLPVNNLKVDGSFVRKITTESTNYQIVNTIIALNNQLGLKAIAEGIETHEQLDLLSQ 1020 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG QY QGYL RP D Sbjct: 1021 LGYQYGQGYLFARPLNAKD 1039 >UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y83_COLP3 Length = 1071 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 96/464 (20%), Positives = 190/464 (40%), Gaps = 22/464 (4%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++V+ + + + + + LQA D LT LPN Sbjct: 589 RKNGEIYPEFLAISVVRDQDKKPLQYISLFSDITKHKKYEEDIWLQANYDSLTGLPNRGL 648 Query: 340 LEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + + + +D +F++ +G ++ L ++E + Sbjct: 649 CVERLHNKLKGDKAEDSEVALLFIDLDRFKFVNDTWGHSSGDELLKLAAIRLRNCIREKD 708 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW-NNTGLDMGYGAAWGRFDGN 447 + + G E +++L G ++ +V + S H NN + + Sbjct: 709 TVARFGGDEFVVLLVGLSNRFAIERVVKNILTSLSMPFHLRNNNEAVVSASIGVTIGPVD 768 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + ++ LL Q+ A + ++ ++++ + +R A+ + + +L+ Sbjct: 769 GDNVELLLKNADTAMYQAKAAGRN-TFQFFTKSMNETVSRRMHIEQALRQAIKRQEFVLH 827 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + E G + ++ D G++ PD F+ + + L V+E L Sbjct: 828 YQPVVSLDTGEIIGAEALIRWQHPDKGLIYPDSFIEIAEEAGLIEPIGQWVIEQACTDLR 887 Query: 565 THPCDKKGPRFSVNLMPLTLLQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + +VN+ Q + I I + K +ISP ++ +EITE N+E Sbjct: 888 YWHDLGLKIQVAVNVSSRQCKQTSQTPIKDIIKKALKVNNISPSSLKVEITESSLMDNSE 947 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 M ++ + G I +DDFGTGY++ LK D++KID F+ + + DA +V Sbjct: 948 EMMTTLQDIRSLGVAIYMDDFGTGYSSLSYLKHFPIDVMKIDRSFIAGSIDDKTDASLVE 1007 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 ++ + + SL +V E +ET+Q L LG Y QGY I +P Sbjct: 1008 AVVLIGHSLSLKLVGEGIETKQHYDYLRSLGCDYGQGYFISKPI 1051 >UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with response regulator, putative n=6 Tax=Cyanobacteria RepID=B0C9M5_ACAM1 Length = 636 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 94/435 (21%), Positives = 173/435 (39%), Gaps = 20/435 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEF 362 E + ++ A+ DPLT LPN E+ + + L D + Sbjct: 190 IAEREKVQQQLKHMAMHDPLTDLPNRTLFLTCLEETIQDTQKQTDQSFALLFLDCDRFKS 249 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G ++ + +I + + + L +L G E ++L E + ++ + + Sbjct: 250 INDSLGHLVGDQFLVAIAKRFQRCVGDQ-LLARLGGDEFTILLKNVSNEQQAINIADAIQ 308 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 H + + + + +L ++ A + Sbjct: 309 RSLLEPFHIGDNEFFVSASIGIVMSSPDYQQPTEMLRDADTAMYRAKAMGKARHI-VFNA 367 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + + L +R A+++ + +L QPI G++ ++ + + G ++P Sbjct: 368 SMHEDVQSSLQLETDLRRAIERQEFILNYQPIVALDTGMITGFEALVRWISPELGFVSPG 427 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQKNIAGRI 593 KF+PL L VL + L + SVNL Q N+ I Sbjct: 428 KFIPLAEDTGLIIPLGEWVLREACRQLNEWQSNNVTDIPLTMSVNLSVKQFSQPNLIETI 487 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ + Q + LEITE N++S+ ++QL ++IDDFGTGY++ L Sbjct: 488 DQILAETQLPTQCLKLEITESAIMENSDSAAKILDQLRDRQIHLSIDDFGTGYSSLSYLH 547 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R + +K+D FV + + IV++I LA+ + VVAE +ET +QQ L LG Sbjct: 548 RFPVNTLKVDRSFVCRLDAADDNVAIVQAIVTLAQTMGMDVVAEGIETTEQQHQLENLGC 607 Query: 714 QYLQGYLIGRPQPLA 728 +Y QGYL +P Sbjct: 608 EYGQGYLFCKPVNAE 622 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 119/587 (20%), Positives = 216/587 (36%), Gaps = 35/587 (5%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV--L 226 L L L I A+ R +E T + V Sbjct: 158 LDGLMARANHDAPLLRIALTDISERKHAESELRLAATAFEAQEGMMITDAHGVIERVNKA 217 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGV 285 + + I L G+ F W ++ + Sbjct: 218 FTQMTGYSAAEAIGQTA-------RLLHSGRHDPAFYAAMWDSLQRTGTWQGEVWNRRKC 270 Query: 286 ETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 Y+ + + + + + + A DPLT LPN R L+ Sbjct: 271 GEVYAEWLTITAVQDEHRTVTRYVGTMLDISQRKAREEEIAQLAFYDPLTGLPNRRLLKD 330 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + + +D+ + ++ G ++++ + L ++E + + Sbjct: 331 RLNQAMAISARSQREGALLFIDLDHFKDINDTRGHDKGDLLLQNVAQRLSGCVREGDTVA 390 Query: 395 QLPGSELLLVL------SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 ++ G E +++L + E + + + + + + F+ Sbjct: 391 RIGGDEFVVMLGADLSTATDEAASHARSVAEKILAALNLPYLMSGEFVHCSASLGVALFN 450 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + +T+ LL + Q+ A L + V + L +R A+ + +L+ Sbjct: 451 DHHDTVDELLKRADQAMYQAKAGGRN-TLRFFDTAVQQTMMLRAALEAELRLAVQRDELV 509 Query: 506 LYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 L QP+ + G + ++ G+++P +F+P+ L VLE+ L Sbjct: 510 LCYQPVIDHQNRLLGAEALVRWKHPRRGLVSPAEFIPIAEDRGLIQAIGRWVLETACTQL 569 Query: 564 ATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 AT D SVN+ L + R+I + P + +E+TE + + Sbjct: 570 ATWAADPATADLVLSVNVSARELHEPQFVERVIEILACTGARPARLKIELTENAVLDHVD 629 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 S+ +++L G R+A+DDFGTG+ + LKRL D +KID FV+D++T+T DA I R Sbjct: 630 DSIAKMKRLKAHGIRLALDDFGTGHGSLSLLKRLPLDELKIDRTFVQDLLTDTHDAAIAR 689 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I L +SVVAE VET Q+ LL G + QG L G P L Sbjct: 690 TIAALGLNLGISVVAEGVETPAQRDLLIACGCRIFQGDLFGPPAALE 736 >UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZI3_COLP3 Length = 858 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 92/479 (19%), Positives = 186/479 (38%), Gaps = 21/479 (4%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 W ++ + Q + ++ + + + + +R Sbjct: 362 LEQGVWQGEIWNKRKNSEIYPQWLT-----IIEISEGVDNNKVFAAIFSDISERKLAEKR 416 Query: 322 WHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 A D LT LPN R + + + +D + ++ +YG + Sbjct: 417 IENLAFYDELTQLPNRRLFFDRVDMALAIAHRKNNKMALFFIDLDYFKEVNDNYGHRIGD 476 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNN 430 +RS + L +E + + ++ G E L+L+ + N + + H Sbjct: 477 LLLRSFAKRLTESSKEGDTVARIGGDEFTLLLTDMREVDHICKACNRIVEKLRQPYHIEG 536 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 L++ + + + L+ ++ + ++ + ++ L Sbjct: 537 HALNITTSIGIAVYPEDGTNEEELMKNADIAMYRAKDIGRN-SFQLFTPAMNAHSQERSL 595 Query: 491 LLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + + +R AL +L L Q + G + +L G ++P +F+P+ + Sbjct: 596 IQSHLRLALVHNELELNYQAQIHGVTGKVMGVEALLRWYNPILGQVSPAQFIPMAEELGF 655 Query: 548 SARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 A D VLE K R +VN+ L Q N+ + + + + + Sbjct: 656 IAEIDHWVLEHACKQRKLWLDQGLDCGRIAVNISALHFHQGNLVASVESVLAQSQLPAEL 715 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + +EITE + + ++QL K G ++A+DDFGTG+++ L L D +KID F Sbjct: 716 LEVEITEGCFIKQMDKATSILKQLKKMGVKVALDDFGTGFSSLSYLTSLPIDTLKIDASF 775 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + + N ++ I +I LA+ +L +VAE VET+ Q+ L + G + +QGY +P Sbjct: 776 IAKLPHNFRESQITSAIITLAQNLNLDIVAEGVETEAQKIFLIERGCEIMQGYFYNKPV 834 >UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1Z2_9GAMM Length = 570 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 180/449 (40%), Gaps = 36/449 (8%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + R A DPLT LPN R+ + + + + +D+ + ++ Sbjct: 108 LKRQEDRLRYLAYYDPLTSLPNRRSFNEQLNRILKRCRRHKTNAALLFIDLDHFKRINDS 167 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKL-------------------YQLPGSELLLVLSG 407 G + I + L ++E++ + +L G E +VLS Sbjct: 168 IGHGRGDRLLVEIAKRLTVELREDDAINYYSDNSAEDDSNNSNTEIARLGGDEFTVVLSD 227 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 G+++ + + S I + + F + E L+ Sbjct: 228 IPNAGQVERVAQRILAALSEPIALQSHNPVVTPSVGIALFPQDGEDPDTLVRNADTAMYA 287 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A +E ++ + +Q+ + +R A+ +L L QP + + + Sbjct: 288 AKAQGRA-CFRFYDEEMNAKAVEQLKMEEELRDAMQNNELELRYQPQVDTATGDVVSMEA 346 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ G+++P F+P+ + V++ + + R VN+ Sbjct: 347 LVRWKHSTRGMVSPLDFIPVAERTGQIIELGEWVMKEVARHCNYWDSMGLPPFRVCVNIS 406 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 PL Q ++ I + + + LE+TE ++A++++ ++QL G +A+D Sbjct: 407 PLQFNQSDLPRSIGEFLRESGMQASRLELELTESAIMTDAQTNIEKLQQLKALGLELAVD 466 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR D +KID FV D+ T T A IV +I L+K +L V+AE +E Sbjct: 467 DFGTGYSSLSYLKRFPIDTLKIDQSFVADLGT-TDGAAIVDAIIALSKTLNLRVIAEGIE 525 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q L G LQGY RP D Sbjct: 526 EKEQLDYLVARGADLLQGYFFARPIYPED 554 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 89/470 (18%), Positives = 180/470 (38%), Gaps = 17/470 (3%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 +N+ + E + ++ + + + + QA D LT LP Sbjct: 360 FHNRRKNGELYWERASISPISNQQGIVTHYVAVKEDITKEKQQAEALFHQAHYDHLTGLP 419 Query: 336 NF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N +A+E A Q+ L +DN + ++ G + + L + Sbjct: 420 NRILAKDRLQQAIESALRQKHIFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSERLQRAL 479 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRF 444 ++ + + +L G E L++L +L + L + ++ + F Sbjct: 480 RQTDTVARLGGDEFLIILDQVSHSRKLMAIAQRLLRVMRQPVNLQGLEFFVHGSIGITVF 539 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + LL + + ++ +++ + + +R L + + Sbjct: 540 PDDGFHADVLLRNADTAMYAAKLAGRNM-FRFFTPHMNQAAQQRMAIESELRQGLSRQEF 598 Query: 505 LLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 + QPI + + G + ++ G + PD+F+P+ + L +L+++ Sbjct: 599 QILYQPIVSLESGQIVGAEALMRWHNRLLGTVPPDQFIPIAEEVGLIVELGEWLLDNVCC 658 Query: 562 WLATHPCDK--KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 A + SVN+ P L + +RY + P+ + LEITE Sbjct: 659 QAAHWHSALGEQTFWVSVNVSPRQLKDSYFVAILQGFLQRYQVRPEWLELEITENLILEE 718 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + N+ L + +++DDFGTGY++ L++ + +KID FV+ + + + Sbjct: 719 NGDLLKNLSDLEEENIALSLDDFGTGYSSLNYLRKFNFNSLKIDRSFVELLPHDNNTVGL 778 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VR+I +A L V+AE +ET +Q L G Y QGYL + + Sbjct: 779 VRAIIAMAHHLELKVIAEGIETPEQWNFLRLQGCDYGQGYLFSPAIAVEE 828 >UniRef50_B6R9S7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R9S7_9RHOB Length = 728 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 97/496 (19%), Positives = 185/496 (37%), Gaps = 17/496 (3%) Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA-FILAVLISFSVCLLYM 308 + R + L Q G + + L + ++ Sbjct: 206 FDKFTRERNRRLDRKVFITGRALPPYEIEQRNHAGDIFHFIVTKSPLLDAEGNTTHVVTT 265 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNL 360 + A D LT LPN L + + + +D Sbjct: 266 ATNISDRKRAEAHLLHIAHHDALTGLPNRTMLGERIDEEIFQCRNSGRSFALHFIDLDRF 325 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + LL + ++ + +L G E ++ + ++ Sbjct: 326 KSINDALGHRTGDRLLEVLAERLLRCVDGSDLVARLGGDEFAILQTDLKSSEEAMRFAQH 385 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L S H + L ++ + + LL QS A Sbjct: 386 LVSVVEEPFHISGKELQTSASVGITKYPEDGLNSEELLRCADMAMYQSKADGGN-TFHLF 444 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMT 534 + + V L +R A++ L L+ QP + G + +L + D G++ Sbjct: 445 STKMDHHVKETVALEAELRNAIEHDQLELFYQPQIDLRTNEIVGAEALLRWNRPDYGVVA 504 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI 593 P+ FL + L V+ + + PR +VN+ P ++N+ + Sbjct: 505 PNVFLGTAEEVGLILPIGEWVIFAACQQAKKWMDMGLETPRIAVNISPTQFRKQNVPQLL 564 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + +EITE +++++ ++ ++ + G I+IDDFGTGY++ L Sbjct: 565 KDALVSCSLPADKLEIEITENIVLHGSDATVRDLREIREMGIAISIDDFGTGYSSLAYLS 624 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D +KID F +D++T+ + +I+++I L K+ LS++AE VET++Q L G Sbjct: 625 RYSVDCLKIDRCFTRDMMTDPNNTVIIKAIVGLGKSLDLSIIAEGVETREQAEYLKDAGC 684 Query: 714 QYLQGYLIGRPQPLAD 729 + QGYL G+P P D Sbjct: 685 EMAQGYLFGKPVPAED 700 >UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ56_DESAC Length = 928 Score = 603 bits (1555), Expect = e-171, Method: Composition-based stats. Identities = 102/453 (22%), Positives = 189/453 (41%), Gaps = 17/453 (3%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS 351 ++ L L+ + + + + A D LT L N L +Q K+ Sbjct: 469 ISLVYDLKGQCSHLIVIGEDITEEKKNAQHFEFLATHDSLTGLANRLLLHDRLDQAILKA 528 Query: 352 --------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 L +D + ++ G ++ I LL +++E++ + +L G E ++ Sbjct: 529 KRVHGTVFLILLDVDRFKMINDSMGHDNGDRLLQLIADRLLKVVRESDTVVRLGGDEFVV 588 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +LS ET + S + + + A + + + LL Sbjct: 589 LLSEVETLDDALCAAEAIHRELSEPFTVSERQIPLTVSAGICSYPDHGMSSLELLRHADV 648 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGE 517 ++ H + E + G + + L +R A+ + +L +Y QP + + Sbjct: 649 AMYKAKETHSQTCI--FESSMDGLVLESLELEAELRQAIVKNELHVYYQPKVDAGSEKIV 706 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 G++ +L + D G+++P F+PL Q L L V+E + + L + Sbjct: 707 GFEALLRWVHSDRGMISPGVFIPLAEQTGLIHEIGLWVIEDVCRQLRQWADQDYAIVPVA 766 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL ++A ++ + YHI E+TE N SS+ +++L G R Sbjct: 767 VNLSAKQFQSVDLAKQVATILDSYHIDSSWFEFELTESMIMQNPLSSIRIMKELKDLGLR 826 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY++ L+RL D +KID F+ D+ + + SI +A++ + +A Sbjct: 827 LAVDDFGTGYSSLNYLRRLPLDYLKIDRSFIDDVTQDLSADAVATSIIGIARSLGMQTIA 886 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET +Q L ++QG+ RP P+ D Sbjct: 887 EGVETAEQLMFLKDNNCDFIQGFYFYRPMPVDD 919 >UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 Tax=Clostridia RepID=Q3AAV9_CARHZ Length = 769 Score = 603 bits (1555), Expect = e-171, Method: Composition-based stats. Identities = 88/445 (19%), Positives = 175/445 (39%), Gaps = 17/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKS 351 ++ + + + + + A DPLT LP A+ A + Sbjct: 307 GKAIRMAGSHTDITQRKQMESKLEYMAFHDPLTNLPRRDVFLERLKVAMADARRNGKKLA 366 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G ++ I + L ++E + + ++ G E +++L + Sbjct: 367 VFFVDLDNFKIINDSLGHHTGDRLLKKIAKELTKCVRETDTISRVGGDEFIILLPDVNSI 426 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + I NN L + + + ++ + +L + Sbjct: 427 EDTDKVAKRILELFDQPIKLNNYELPVTISIGIAIYPDHGKSERAILKNADIAMYTAKRK 486 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + + + + +R AL++ +LY QP+ + + + +L Sbjct: 487 GKN-GFQYFDIAMKSEVEFANTVKRDLRLALEKNQFILYYQPLIDLKTGKIASMEALLRW 545 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTL 584 G+++P F+P+ + VL + + + G SVN+ L Sbjct: 546 QHPKKGMISPFHFIPIAEETRQIISIGEWVLRTACRQMKEWLGMGYSGFSVSVNVSVHQL 605 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q N A + + K + P+ + LEITE E+ + N+ L K G +I IDDFGT Sbjct: 606 EQPNFAKVVCDILKEIELEPRYLELEITETVLIEAVETVVENLYHLKKAGVKIIIDDFGT 665 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 +++ +++ D +KID FV I + I+ +I L L V AE VET++Q Sbjct: 666 ENSSFRYMQKFTVDGLKIDRSFVNGIKIDVN-KAIIDAIILLGHRLKLPVTAEGVETREQ 724 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L + G +QG+ +P P + Sbjct: 725 LECLIESGCDKVQGFYFSKPLPPDE 749 >UniRef50_Q07VY4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07VY4_SHEFN Length = 696 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 104/453 (22%), Positives = 166/453 (36%), Gaps = 30/453 (6%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLR 356 + + + + A D LT LPN R A+ A + + Sbjct: 243 INGTLHDISSRKKSEQEIAYYAFYDTLTDLPNRRKFLLQLDSAIASAKRHSTKLALLFID 302 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE-------------KLYQLPGSELLL 403 +D+ + ++ G + + ++ ++ L +L G E L Sbjct: 303 LDHFKRINDTLGHKAGDELLCETATRIKSSVRISDELSVGSRVDYENEHLARLGGDEFTL 362 Query: 404 VLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L E + + + S+ + + + E+ LL Sbjct: 363 LLCELEAFDNVAIIAQRVLDALSKPFVIQGQQTFISASIGISFYPDDGESGDILLQHADT 422 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ-GDLLLYAQPIRNK---EG 516 + + + ++ + +R A+ +LY QP + Sbjct: 423 AMYEVKHNGKN-GYQLFSHEMHKSLMDRLKIEVELREAIRLGDQFVLYYQPQIDSANDNI 481 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRF 575 GY+ +L G++TP FL + L L H D R Sbjct: 482 VGYEALLRWNHPTRGLLTPIDFLAIAESSGLIIPIGEWALLEACSKAKQIHIADANFQRM 541 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL L NI + R + P + LEITE SN + ++ + L K G Sbjct: 542 AVNLSALQFNHANIFDHVKRALVETGLPPNLLELEITESAIISNVDEAIALLFMLKKLGV 601 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++AIDDFGTGY++ LK D +KID FV IV+N DA I R+I LA LS + Sbjct: 602 KLAIDDFGTGYSSLNYLKSFPIDTLKIDKSFVDGIVSNQKDAAIARTIVQLALNLELSTI 661 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE +Q LL +G LQGYL +P P Sbjct: 662 AEGVEYIEQHELLKAMGCTNLQGYLYSKPLPPE 694 >UniRef50_A6CIW9 Sensory box protein/GGDEF domain protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CIW9_9BACI Length = 706 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 92/547 (16%), Positives = 196/547 (35%), Gaps = 26/547 (4%) Query: 205 APSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYL--VPVFFIIFTLGVGK 257 ++ +L + ++ +L+ + + GY L + Sbjct: 152 QMLEESNEKYKSLFESSPDAMYSMDENGILIDVNPAGEQLIGYSTKEMKGMPFMPLVASE 211 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRS 315 + + + ++ + + + V R + Sbjct: 212 DLPEAIKHFESAKVGEPSSAELVLIRKDSQKIHVEATHYPMKVNGEIVGTYGTARDITKK 271 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHY 367 + + + A DPLT LPN + E Q + L +D +F++ Sbjct: 272 KLYDEKMRELAFYDPLTRLPNRKLFEDRLGQIIKLAKIEEKLFSVIFLDLDRFKFINDSM 331 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 G + ++ + L ++ + L +L G E ++L TE + + +N + Sbjct: 332 GHHIGDEFLKLVADRLKQSIRSTDTLSRLAGDEFTILLPDI-TEEDVISIAERINQSLAE 390 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + L + G + ++ + Q+ + + Sbjct: 391 PFQVSGHWLSVSASIGIAFSTGKNVGVSEIIHRADTAMYQTKKF-RRSQYTIYSDEMEVD 449 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 T+ +++ + A+ +L LY QPI N E + ++ + G++ P+ F+ + Sbjct: 450 TSYNLIIERDLPLAVINNELELYYQPIMNLESEKVIAMEALIRWHHPELGMVAPNDFIRV 509 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + VLE+ + +VN+ L Q + + ++ + Sbjct: 510 AEECGQIIPIGNWVLETACIQNKKWQDSGKPPFKVAVNVSTKQLQQYDFVDSVKKVLAKS 569 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + + LE+TE + E ++ +L G I+IDDFGTGY + L++ D + Sbjct: 570 GLEAKWLELEVTESILLDDVEEIKESLTRLRGIGVSISIDDFGTGYTSLSYLRQYPFDTV 629 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+ DI + I +I LA + +++VVAE +E + + L + QGY Sbjct: 630 KIDKSFIDDISRDLHGKRITSAIISLAHSLNMNVVAEGIEGETELIFLKREKCDAGQGYY 689 Query: 721 IGRPQPL 727 +P P+ Sbjct: 690 FSKPIPV 696 >UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gammaproteobacteria RepID=B9ZNJ0_9GAMM Length = 706 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 99/461 (21%), Positives = 187/461 (40%), Gaps = 17/461 (3%) Query: 284 GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 E ++ A + + R + + QA D LT LPN Sbjct: 233 RRYFEVAVWPTAASDDTGETLVYGTARDITDRKESEAFINFQAYHDLLTRLPNRALFRDR 292 Query: 344 --------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 Q + + ++ + ++ G + ++++ + LL +++ + L + Sbjct: 293 VDVAIAQAQRQGHPLAVMFIDLNRFKVINDSLGHTIGDRLLQAVAQRLLGCIRKGDTLSR 352 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNN-TGLDMGYGAAWGRFDGNQETL 451 G E L+L + + + H L +G + +TL Sbjct: 353 FGGDEFTLLLPQISRQEAAVDVAEKILESLNEPFHLGGDHELYVGASIGIAIYPEGGDTL 412 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ + + + G T ++ L +R AL++ + + QP Sbjct: 413 ETLIRHADIAMYREKNTGKN-GIRLFAPEMHGNTPHRLQLEQDLRKALEREEFHILYQPQ 471 Query: 512 RNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + E G + ++ D G++ P +F+P+ L D L + L + Sbjct: 472 VDGETGQLLGVEALVRWNHPDRGMLGPAEFIPVAEDTRLIVDLDRATLRNALGDIRKAHQ 531 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 R +VNL P+ + + + ++ L + + +EITE S+ ++ + Sbjct: 532 HVPNLRLAVNLSPVLIERDDFVDGVLGLLVETGFPAELLEIEITESLLMSDTHDTVAKLN 591 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +L + G ++A+DDFGTGY++ L++L +KID F I T+ A IV +I +A+ Sbjct: 592 RLCEAGVQVAVDDFGTGYSSLSYLQKLPVHTLKIDRSFTLTICTDGE-ACIVNAIVSMAR 650 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +++VAE VET QQ L +LG +QG+L G P PLAD Sbjct: 651 GLQMNIVAEGVETAAQQEYLRRLGCPMMQGFLFGHPSPLAD 691 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 101/508 (19%), Positives = 201/508 (39%), Gaps = 18/508 (3%) Query: 239 IAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 I+GY + F L + + L+ A++ + ++ + + + Sbjct: 480 ISGYSLDDLKGRPPRFMLEGYQDKVSLDELSLALNEQGVWRGEMKAVRKDGSLLPIYCNI 539 Query: 296 AVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----APEQEA 348 + + + + ++ V + R D LT LPN + + Sbjct: 540 SSIRNDAGKVVNWAVFVTDLSERKAAEARIESLTHVDQLTELPNRQGFSRIMGEWLAAAR 599 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D L ++ +G +R I L ++++ + L +L G + ++L+ Sbjct: 600 KGALILIDLDQLSRVNDAFGHAAGDAMLRRISVRLRKILRDGDFLGRLGGDQFGVLLAQG 659 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + L ++ + + + A + + LL + Sbjct: 660 IRPVVAEVVARKLLDAIAQPVMIEGSDIVTTASAGICLLGSDGHDVASLLRNADNALHHA 719 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 A ++ + +++ L + +R AL + +LLL+ QP + E G++ + Sbjct: 720 KDSGQN-AFRFFSADMNVRMAERLRLESDLRWALSRNELLLHYQPQVDINSGEIIGFESL 778 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMP 581 L + G+++P F+PL + L VLE + P+ +VNL Sbjct: 779 LRWQHPELGMVSPVNFIPLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKVVAVNLSA 838 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + +I + + + + + + LEITE + E + +++L G ++IDD Sbjct: 839 VQFHGADIVALVSQSLQNSGLEARYLELEITESVIIEDPERVIRIMDELKMLGVGLSIDD 898 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR D IKID FV+D+ NT DA I+R + +A+ V+AE VET Sbjct: 899 FGTGYSSLSYLKRFPIDKIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVIAEGVET 958 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L QG+ P + Sbjct: 959 VEQLEFLRSHHCDEYQGFYCSPGVPAGE 986 >UniRef50_B4W5F5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W5F5_9CYAN Length = 776 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 100/590 (16%), Positives = 191/590 (32%), Gaps = 62/590 (10%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIF 251 ++ E + ++ A + + + GY P ++ Sbjct: 175 ITERKQAEQALKQAEAKYRSIFENALEGIFQSTADGHYISANPALARLYGYSSPDELMVR 234 Query: 252 TLGVGKLRYPFLNLTWAVSTLC-----LLNYNQNFLQGVETEYSLAFILAVLISFSVC-- 304 + Y S L + ++ + + +A + Sbjct: 235 LTDIEHQLYVDPQRRAEFSRLLQENDAVADFESQVYRKDGSVIWIAENARAVRDMMTGEL 294 Query: 305 --LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFC 353 V + + +A D LT LPN + Sbjct: 295 LYYEGTVEDITEHKLAKDQLQTRAFYDTLTGLPNRALFMDRLSHTVERAKRHPTYRFALL 354 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G ++ + I R L ++ + + +L G E ++L E Sbjct: 355 FLDLDRFKVVNDSLGHLVGDQLLIGIARRLESCLRTEDTVARLGGDEFTILLEDIEDIHH 414 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDG--------NQETLQPLLGQLSWLA 462 + + + + + G N + + LL Sbjct: 415 ATRVAERIQQELAAPFNLDGHEVFTGASVGIVLSREIRKEGDITNYDCPEDLLRDADTAL 474 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 ++ A + + + + L +R A++ + +Y QPI + + G+ Sbjct: 475 YRAKALGRSR-YEIFDLTMHQNALSVLQLETELRRAVENQEFEIYYQPIVSLSTHQIAGF 533 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---------- 569 + +L G++ P +F+P+ + L +L + L Sbjct: 534 EALLRWHHPSRGLVYPGEFIPMAEETGLIIPMGWWMLRQACRQLELWHDTVQESELNQEL 593 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 VNL LQ + + ++ H+ P + LEITE ++ E + +++ Sbjct: 594 AHQLTIYVNLSSKQFLQPELLEHLDKILHETHLHPSHLKLEITESCLLADPEIAEERLKE 653 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA------------ 677 L + IDDFGTGY++ L R D IKID + +I + Sbjct: 654 LRDRQIGLCIDDFGTGYSSLSYLHRFPIDTIKIDQSLISNISIDVQGHCEAGMINRTKGL 713 Query: 678 --MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 IVR+I LA + + V+AE VET++Q L L Y QGYL P Sbjct: 714 PLQIVRTIIMLADSLGMKVIAEGVETKEQLTQLRLLDCDYAQGYLFQAPL 763 >UniRef50_Q3SK35 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=2 Tax=Betaproteobacteria RepID=Q3SK35_THIDA Length = 730 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 107/503 (21%), Positives = 194/503 (38%), Gaps = 18/503 (3%) Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN-FLQGVETEYSLAFILAVLISF 301 L+ + I G G ++ F T + + Q + GV +L ++ LI Sbjct: 208 LIATYLPIHEHGNGPVKAVFEVYTDVTPLVAKMEATQTKIITGVVLALALLYLFLFLIVR 267 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFC 353 + + + +R QA D LT LPN + + + Sbjct: 268 RADQIITRQD-RERQDNEQRIRHQAFHDSLTGLPNRNSFLEHISEAIDRSKRSGNPGALL 326 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G +R + ++E + +++ G E +++L + Sbjct: 327 FLDLDRFKLVNDSLGHDAGDQLLRITASRIQKCLRETDMAFRMSGDEFVVILESVDKGEH 386 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + + F G+ +Q LL + ++ Sbjct: 387 AALAAQRVMQEMAVPMSLSGCEVIVNVSIGITTFAGDSADVQALLKEADSAMYRAKQVGQ 446 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 + ++ +++ + ++ AL + +L+ QP + K + +L Sbjct: 447 NH-YEFHTPDMNSAAHERLSMETDLQRALQNQEFVLHYQPKIDTATKAIVSVEALLRWNH 505 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQ 586 G++ P+ F+PL+ L VL R SVN+ Sbjct: 506 PTRGLVLPNTFIPLLEDTGLINPVGEWVLLQAACQAQAWIDAGLEPIRMSVNISAKQFRS 565 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + R + + + LE+TE NAE S+ +++L G ++IDDFG+GY Sbjct: 566 HILVETVRRTLGASQLESRYLELELTESMFIENAERSIQIMQELKCLGVSLSIDDFGSGY 625 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+ D +KID FV D+V+N DA I +I LA + L +VAE VE Q Q Sbjct: 626 SSLAYLKQFPVDYLKIDRSFVTDLVSNKKDAAIAVAIAALAHSLDLKLVAEGVEDQAQVE 685 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K G LQGYL GRP + Sbjct: 686 FLEKQGCHELQGYLFGRPVSAEE 708 >UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EJ7_DECAR Length = 695 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 90/433 (20%), Positives = 172/433 (39%), Gaps = 17/433 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + A DPLT L N R + + + +D + + Sbjct: 256 ISERRQAQSKLNYLAYHDPLTGLANRRCFIERLEESLSEGERHGEKLAVLYIDLDQFKQV 315 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + S+ L ++ + L +L G E + ++ +E ++ + + + Sbjct: 316 NDSLGHGVGDELLVSVAARLSEHVRLIDMLARLGGDEFICLMEAARSEDEVELLAREIIA 375 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + L + + ++ L+ ++ Sbjct: 376 AFEYPFKLGDHELFLTASVGISLCPSDGNSVLDLMRNADTAMYRAKMLGRG-NFHFYTAE 434 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 ++ + +++ + N +R ALD G+L ++ QP + + G + ++ + G + P + Sbjct: 435 MTREAQERIQMENLLRRALDNGELSVHLQPQVDSRSGQLVGAEALVRWNSPELGQVMPIR 494 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRL 596 F+PL L VL + SVNL L + + ++ Sbjct: 495 FIPLAEDSGLIIGLGNWVLRETCRQFMQWRMSGFELPQVSVNLSVKQLERPEFIDVLDKI 554 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P + LE+TE + + +E+L G +A+DDFGTGY++ LK L Sbjct: 555 LDETGMDPTLLKLELTESVVMA-VGDAFTPLERLRDLGISLALDDFGTGYSSLSYLKMLP 613 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID FV+ I N+ D I+R+I +LA++ VVAE VET +Q L LG + L Sbjct: 614 VQQLKIDRSFVEGIGRNSGDEAIIRTIMELARSLGFEVVAEGVETVEQANFLADLGCEQL 673 Query: 717 QGYLIGRPQPLAD 729 QG+L G+ + Sbjct: 674 QGFLHGQAVSPVE 686 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 93/442 (21%), Positives = 177/442 (40%), Gaps = 19/442 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------QEAGKSFCC 354 + R A D LT LPN A+ Q + ++ G + Sbjct: 508 DGGFVATYEDVTERRRAEARIAFMAHHDMLTGLPNRVAVGQQIDVAVAQAGRDQGFAVFA 567 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D+ ++ G + + ++ L ++E + + +L E ++V G + Sbjct: 568 IDLDDFRPVNETLGHGIGDELLVAVANRLTACVREIDCVARLGADEFIVVQRGVDRPEDA 627 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + +G + LL ++ Sbjct: 628 AILARRIIEVVGAPYSLTHHTISVGLTIGITLAPSDGSNADKLLKNAEVALDRGKTEARG 687 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 A E + + + ++ +R AL + +Y QPI + G++ +L Sbjct: 688 -AFRFFEPAMDARLIARRIMERDLRDALAREAFEVYYQPIYSLETDRICGFEALLRWNHP 746 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G ++P +F+P+ + L VL + A P + + +VN+ + + Sbjct: 747 VRGFVSPAEFIPIAEELGLIVPLGEWVLRRACEEAARWPDE---LKVAVNVSAVQFTSAS 803 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + +R + + + LEITE +N ++ + L G R+A+DDFGTGY++ Sbjct: 804 LVTAVREALRRTGLPGRRLELEITETVLVANPGATTAILHSLRALGVRVAMDDFGTGYSS 863 Query: 649 YERLKRLQADIIKIDGVFVKDI-VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 L+ D IKID FV+D+ V + D IVR++ L + ++ AE VET+ Q A Sbjct: 864 LSYLRSFPFDKIKIDQSFVRDLCVKDGTDF-IVRAVIGLGASLGMTTTAEGVETEAQLAH 922 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G +QGYL RP P+++ Sbjct: 923 LRAEGCDEVQGYLFSRPVPVSE 944 >UniRef50_Q39XT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39XT2_GEOMG Length = 820 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 96/471 (20%), Positives = 182/471 (38%), Gaps = 20/471 (4%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTL 333 +L ++ AV+ S + ++ +V + A DPLT Sbjct: 343 RELIYLARDGAAIPVSVSGAVMRSPTGEVVGIVCIAHDISERKRSEEEIRRLAFYDPLTR 402 Query: 334 LPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN + Q + L +D + ++ G + ++ L Sbjct: 403 LPNRSLFQDKLAQAIRRSRTDGDMIALLFLDLDRFKDINDTLGHAYGDQLLLAVAARLGD 462 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWG 442 ++ E L +L G E + +++G + + + + + ++ L + Sbjct: 463 NLRPTEFLARLGGDEFVFLVTGLRDKRSVGSLAHSILELLNTPFEIDDKELFISTSIGIA 522 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 G+ + LL + A E ++ + ++ L ++ A Sbjct: 523 LSPGDGDDGDTLLTHADMALYAAKEQGRN-AFSFFSEELNREARERRHLEGSLHRAFAND 581 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L QP + ++ ++ + G++ P++F+P+ + L R VL + Sbjct: 582 EFFLEYQPQIELRSGRIFSFEALVRWQHPEDGLIYPNRFIPVAEETGLIRRLGEWVLRTA 641 Query: 560 LKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 R +VN+ Q + R+ + + P+ + LE+TE + Sbjct: 642 CLQCRQWQQPGLPPVRVAVNVSGHQFNQPGFIDMVDRVLEETELDPELLELELTESSLMA 701 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 A+ S+ + L G +AIDDFGTGY++ LK D +KID FV+DIV + D Sbjct: 702 GAQESIMTLIDLKVRGIHLAIDDFGTGYSSLSYLKHFPLDRLKIDRSFVRDIVKDLDDRA 761 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP-QPLA 728 IV +I +A + L V+AE VE + + LL + G +QG+ P P A Sbjct: 762 IVEAIIAMAHSLGLRVLAEGVEHEDELELLKERGCDEVQGFYFAHPLLPAA 812 >UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XP68_PSEMY Length = 1254 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 127/588 (21%), Positives = 215/588 (36%), Gaps = 35/588 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------ 228 +++ L R +L D + E R TL A ++LL Sbjct: 659 GQVVFTRLSLRAVRGGAGRQTLFLLLVEDTSARREAEARYHTLVEHAPEAILLFSPEGGI 718 Query: 229 --------LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 L D + + + G R +L A++ + Sbjct: 719 VECNENALQLLRYRREDLLGKTIQSISPPRQADGSLSSRTGREHLQRAIAGDTPVF-EWT 777 Query: 281 FLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + L + + + V + R A +D LT LPN R L Sbjct: 778 HRDSAGRQLPCEVRLVRMPGEELLIRASVLDISERQRYQREIERLAYSDELTGLPNRRLL 837 Query: 341 EQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + + +D+ + ++ G ++ + + L ++ + Sbjct: 838 LDRLQHAMDRENREGSLGALLFIDLDHFKTVNDSLGHLIGDALLCEVTTRLARELRTEDT 897 Query: 393 LYQLPGSELLLVLSGPETE-----GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 L +L G E +++L +E + L L + Sbjct: 898 LARLGGDEFVVLLEALGSEPQAVAEHAAAVGEKLLRGLQGSCLIEGHELAISASIGIALH 957 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + +L Q ++ AL + +++ L +R A+ + L Sbjct: 958 PLGLQRAADILKQADTAMYRAKHAGRN-ALHFFAPEMQAAIDQRLQLQGELRQAIARQQL 1016 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP + G + +L L + G ++PD+F+PL + L VLE Sbjct: 1017 QLVFQPQLVLADDTVAGAEVLLRWLHPERGEISPDQFIPLAEETGLIQDIGQWVLEQSCA 1076 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 LA +VNL P L Q R+ +R+ + QA+ LEITE + + Sbjct: 1077 TLARWQAQWPQLVLAVNLSPRELRQAGCVARVEDCLRRHGVPAQALELEITEGVLLEDVD 1136 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + N++QL G R AIDDFGTGY++ LKRL D +KID FV D+ + M+V+ Sbjct: 1137 RCIGNMQQLKAQGVRFAIDDFGTGYSSLTYLKRLPLDRLKIDRSFVADLDGDASGRMLVQ 1196 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I +A+ L VAE +E Q ALL + G QGYL G+P A+ Sbjct: 1197 TILMIARNLDLECVAEGIEQPSQLALLREQGCALGQGYLFGKPMVEAE 1244 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 97/317 (30%), Gaps = 20/317 (6%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLC-GM 71 + L + L L +IS ++ + L ++PL + L + +G R + + + Sbjct: 14 WW-----LPLPLFHLGTWISLATRLNDG-VALCYLPLVLGLVLCLWWGPRVLPALYLNAL 67 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 LW + + +T V +LR L R G++ Sbjct: 68 LSVPLWGLPWQWAPLYAL--PETVAVALGWWLLRRHSFDPALGSLADLL---RFLAFGVL 122 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 P + + L++ + A + D ++L + L + + ++ Sbjct: 123 APAALVALGLQANLWLT-GLQLGEHWAQASLAVWLNDAINLLA---LATPLLVFGSPLLR 178 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 + + D L L+ L+ + + + + + Sbjct: 179 ARGWLPESTAADAQALSISRSWRGWLLAFGIFLALMALVGSLPLLVALPFLGIGMLALAL 238 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNF----LQGVETEYSLAFILAVLISFSVCLLY 307 Y + + A L LL + F L + + ++ ++ + L Sbjct: 239 RYAFAGALYGAVLVFAATLPLPLLRGDPGFAMLDLPRSQLQLAVLLLMGAALLVGRALGD 298 Query: 308 MVRIYHRSEWLNRRWHL 324 + + RS + ++ Sbjct: 299 LRQALSRSARMQQQLAR 315 >UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Alphaproteobacteria RepID=A6UJR0_SINMW Length = 1071 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 107/576 (18%), Positives = 205/576 (35%), Gaps = 43/576 (7%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFT-------LSWLAALSVLLLLLCTPYENDFIAGY 242 + P +WR L ++ + S L+++ + + D+ Y Sbjct: 493 LGKPSRILSIWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTMDSVMLLDADWRVRY 552 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY----------SLA 292 L + +G L F L + + ++ + + Sbjct: 553 LNENAKKLLQIGDEALGKKFWKLFPEEEMGNFAKHCREVMERRVRSFFEDHLPSLGRWIE 612 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQAPE 345 + R + A D LT LPN + E Sbjct: 613 ANASPTQDGISIF---CRDITERRRAEEDTLLAQKQLAHMARHDMLTGLPNRMFFRECFE 669 Query: 346 Q------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 Q A + CL +D + ++ G +R + + L+ ++ E + +L G Sbjct: 670 QALNESRHARMAVLCLDLDGFKAINDTLGHPAGDVLLRQVSQRLIQSVRTTETVARLGGD 729 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++ ++ H+ L S +G + + L+ Sbjct: 730 EFAIIQPLAKSRDEAFHLAQRLIDTLSEPFSIEGAAATVGTSIGIAFAPEDGTSADELIK 789 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG 516 + + + + Q + +R AL + L+ QP+ N E Sbjct: 790 AADIALYSAKSSGRG-TYRLFDVAMHAQLQAHQQMKVAMRDALANREFELHYQPLVNLES 848 Query: 517 EGY---DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 + +L G++ P +F+P+ + +L+ + A P Sbjct: 849 RCVSCCEALLRWRHPQRGMIAPSEFIPIAEETGAIVLIGEWLLDEACRQAARWPER---V 905 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VNL P+ +N+ G + H+ P + LEITE +E ++ ++ L + Sbjct: 906 SVAVNLSPVQFKHRNLVGAVANALSSSHLDPARLQLEITETVLLDESEHNLELLQDLRRL 965 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +IA+DDFGTGY++ L+ D IK+D FV+D+ IV+++ L ++ ++ Sbjct: 966 GVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGRESLAIVKAVAGLGQSLGMT 1025 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+ Q A+++ G +QGYL RP P A+ Sbjct: 1026 TTVEGVETEDQLAIVNSEGFDEVQGYLFSRPLPAAE 1061 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 94/444 (21%), Positives = 175/444 (39%), Gaps = 19/444 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKS 351 + + + ++ A D LT LPN E+A + + Sbjct: 441 GNVANYVSVFSDISVIKEKEKQLRHLANHDSLTGLPNRLLFFNSLENSLERARRRRMEVA 500 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G ++++ R LL ++ + + +L G E + L Sbjct: 501 LMFIDLDRFKIINDTMGHEAGDILLKTVARRLLEAVRGEDMVARLGGDEFTISLEELSNT 560 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 L + +H + F + + Q L ++ Sbjct: 561 EDAAAKAGKLIETIRQPVHIGGHEIVCSASIGIAIFPHDADNAQNLARAADAAMYRAKEL 620 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 H + ++ + + + L + +R AL++ + LY QP N G + +L Sbjct: 621 HRN-TFEFYTSELTERAIEHLTLSSEMRQALERNEFELYYQPQFNLTSGRLVGAETLLRW 679 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 G++TP F+ + L V+ L + +A R + N+ L Sbjct: 680 RHPTRGLITPYCFINIAEDSALIDPIGGWVINQLCRDVAGWLKGGLKLPRIAFNVSSKQL 739 Query: 585 LQKNIAGRIIRLFKRYHISPQAV--ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 ++ GRI +R+ + P + LE+TE + E S+ + Q+ G +AIDDF Sbjct: 740 EHYDVKGRIEHALQRWGLEPSDLDLELEVTEGAL-QHEERSVEVLRQVRLLGLSVAIDDF 798 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ RLK + D +KID +F++D+ + + + I L +A L VVAE VE Sbjct: 799 GTGYSSLSRLKHMPIDTLKIDRMFIRDLPDDPNNQALASGIILLGRALGLKVVAEGVENV 858 Query: 703 QQQALLHKLGVQYLQGYLIGRPQP 726 +Q L + QG+L+ +P P Sbjct: 859 EQLRFLQERNCDEAQGFLLSKPLP 882 >UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9K4_9GAMM Length = 938 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 91/448 (20%), Positives = 177/448 (39%), Gaps = 22/448 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------------ 347 ++ + + + + A D LT LPN R ++ + Sbjct: 469 GKAINYIGTIVDISKRKQAENTLQHLADYDSLTDLPNRRFFKEQVDHIIEIDKQRKPTEP 528 Query: 348 -AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + L +D +F++ G ++ I LL +N + +L G E ++VL Sbjct: 529 INKFALLFLDLDYFKFINDSLGHSAGDKVLKIIASRLLEHKDKNTIISRLGGDEFVIVLQ 588 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 +E ++ L + ++ L + + + LL Sbjct: 589 DIASEKAVKQFCFELMQNIEKPMNILGRSLIVTPSIGATLYPKDGNRTNILLKNADAALY 648 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYD 520 ++ + ++ K++ L N +R AL++ +Y QP N + G + Sbjct: 649 RAKENGRNNV-QFFTANLNRDALKRLSLENDLRRALNRNQFEIYYQPQVNLNTKQVIGCE 707 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNL 579 ++ G ++P +F+P+ + + +L + A + + ++NL Sbjct: 708 ALIRWHHPTKGFVSPIEFIPIAEETGIINEIGEWILFEACQQAANWCNEYGREIDIAINL 767 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + +++ + + + LEITE + E ++ + QL + ++A+ Sbjct: 768 SARQF-DDTLVSTVLKALNQSQLPSHCLTLEITESILVQDPEQVIHTLTQLRQSSIKVAL 826 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTG+++ LKR D +KID FVKD+ NT D I+ S+ +AK L+ +AE + Sbjct: 827 DDFGTGFSSLSYLKRFPLDKLKIDRAFVKDLPNNTDDGAIIASVLAVAKHFQLTTIAEGI 886 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPL 727 E Q+ALL L QGY +P Sbjct: 887 ENTDQEALLEALNCTQGQGYFYDKPLTA 914 >UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=Q1LBF7_RALME Length = 839 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 99/496 (19%), Positives = 187/496 (37%), Gaps = 20/496 (4%) Query: 252 TLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLY 307 L G+ F W+ + + Y ++ + + + Sbjct: 328 MLSSGRQGPSFYQEMWSQLRAQGHWKGEIWNRRKNGELYLEHLSVSSICNQAGECTHYAA 387 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDN 359 + R + A+ DPLT LPN + +Q L +D Sbjct: 388 IFSDITHRRIAEERLNHLAMHDPLTDLPNRTLFSERLKQAIIRARRASRRVGVLFLDLDR 447 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G +R I L ++E++ + +L G E +V+ E + H+ Sbjct: 448 FKMINDTMGHGTGDDALRVIAMRLKHAVRESDTVARLGGDEFTIVVEEIEDIRHVAHIAQ 507 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 +L + I + + + + Q LL Q ++ Sbjct: 508 VLLDVVGQPIDAAGRSVFVTPSIGISIYPDDGTDQQQLLMQADRAMYEAKQEGKN-TFRF 566 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 ++ + + L +R AL + + L+ QPI + + +L G++ Sbjct: 567 FATQMTSSAMESMALECELRRALTRREFRLHYQPIYDLGSGRIVSVEALLRWQHPTRGLL 626 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGR 592 +P F+ + + L VL + A R SVNL + ++ Sbjct: 627 SPGAFIDVAEESALVVPIGAWVLREACRQGAAWLRSGFEFGRMSVNLSARQIRHEHFLHD 686 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + P+ + LE+ E A + + + +L + G +AIDDFGTGY+++ L Sbjct: 687 VSDVLSDAGMQPEHLQLELVESMAMTGNGVTELVLGELARRGVGLAIDDFGTGYSSFTYL 746 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + L D +K+D F+ ++ D I+R+I +A+A L+VVAE VE Q L ++G Sbjct: 747 QTLPVDTVKVDRSFLTAVIERERDGAILRAIVAMARALGLTVVAEGVENIAQLQFLREIG 806 Query: 713 VQYLQGYLIGRPQPLA 728 QG+L+ RP P Sbjct: 807 CDRAQGFLLARPGPAE 822 >UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V294_9PROT Length = 1157 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 98/466 (21%), Positives = 180/466 (38%), Gaps = 31/466 (6%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL------- 340 EY + + S+ L A D LT Sbjct: 680 EYLAITAVKDESGVVNNYVATFNDISDSKAATNEIQLLAFYDALTG----LPNRRLLLDR 735 Query: 341 -----EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + + +DN + ++ G + +R + L ++ + + + Sbjct: 736 LLQALASSVRSNRMGALLLIDLDNFKTLNETMGHDIGDLLLRQVAERLTACVRNGDTVAR 795 Query: 396 LPGSELLLVLSGPETEGR---------LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDG 446 L G E +++L + + ++N LN F G Sbjct: 796 LGGDEFIVMLEEIGAQTVDSVTHTTTIAEKILNSLN-LPYRLEKHECHSTPSIGATLFSG 854 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 Q++ L+ Q+ Q+ L + + + + L +R AL + L Sbjct: 855 TQQSADELMKQVDIAMYQAKQAGRN-GLRFFDSKMQDAISARASLEADLRVALINSEFQL 913 Query: 507 YAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 + Q N G + ++ + G+++P +F+PL + L VL++ L Sbjct: 914 HYQIQVNSLGAALGAEVLIRWMHPQRGMVSPAQFIPLAEESGLILPVGEWVLKTACHQLK 973 Query: 565 THPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + + +VN+ Q + + + +P + LE+TE N + Sbjct: 974 VWQDNALTRELTLAVNVSSKQFRQAEFVELVKKTLQSSGANPSLLKLELTESLLLENIDE 1033 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + +L G +IDDFGTGY++ + +KRL D +KID FV+DI+ + DA IV++ Sbjct: 1034 IIAKMNELKLMGIHFSIDDFGTGYSSLQYIKRLPLDQLKIDQSFVRDIMDDNNDAAIVQT 1093 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I ++ A L+V+AE VET++Q+A L G QGYL +P PL Sbjct: 1094 IIAMSDALGLNVIAEGVETREQRAFLDSHGCHTFQGYLFSKPIPLE 1139 >UniRef50_Q2S9L1 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=2 Tax=Proteobacteria RepID=Q2S9L1_HAHCH Length = 1263 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 86/460 (18%), Positives = 178/460 (38%), Gaps = 19/460 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + +A + + ++ S + QA D LT LPN Sbjct: 639 RKDGSPFWNELHIAPVYDDRRMLTHFVAVINDVTESRHYQEQLEYQATHDDLTGLPNRNM 698 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + L ID + ++ G ++ I + L + + ++ Sbjct: 699 MRDRLGQELWRAARNKHKVAIVFLDIDQFKLINDSLGHNAGDAMLKVIAKRLTGMARASD 758 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +++L ++ ++ L ++ I ++ + + + + Sbjct: 759 TVVRYGGDEFVIILPDISPPEKVASFISRLMEVIAQSIQLDHRDIHVSASIGVSIYPQDG 818 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + + L+ + E ++ +++ L +R ALD+ L Sbjct: 819 DHPEVLIKNADIAMYLAKEEGRNR-FHFFTEDLNKTAMERLDLEVRLRAALDKQQFHLEY 877 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L + + G + P KF+P+ + L VL + Sbjct: 878 QPQVDLRSGVITGVEALLRWREPELGDIPPGKFIPIAEETGLIGAIGEWVLHAACVQAKA 937 Query: 566 HPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 S+NL L + + + + + +E+TE N Sbjct: 938 WSDLVAHPLTMSINLSAKQLTMARFDSALHSILTDTAVDCRYIEIELTESAIMRNVNEMR 997 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L + G ++A+DDFG GY+++ L+ D +K+D FV+DI T+ A I R++ Sbjct: 998 ERLNILKEQGLKLAVDDFGVGYSSFSHLRSFSFDRLKLDITFVRDITTDPNTASIARTVM 1057 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +A++ + VVAE +ET+ Q L +LG QG+ +GRP Sbjct: 1058 SMARSMHMQVVAEGIETEAQLRYLQRLGCDVGQGFFLGRP 1097 >UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXT2_DESAC Length = 868 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 108/581 (18%), Positives = 218/581 (37%), Gaps = 29/581 (4%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 LI + +I + Q+ + + + + L L L E Sbjct: 275 ALISGAVLLLFLLIITALLRWQVRRKTEELRRFKQRFEYLQKASPVVLFNLALPTGRAPE 334 Query: 236 NDFIAGYLVPVFFIIFTLGVGK-----LRYP-----FLNLTWAVSTLCLLNYNQNFLQGV 285 +++ + +F + +P ++ + + Sbjct: 335 VLWVSDNITRLFGFTPEQTYQPGWWQSIIHPGDLQQLEANMRSMPKIGHGSVEYRLYDND 394 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL-- 340 T + L L + + ++ S + DPLT LPN L Sbjct: 395 GTLRYVREELQFLPATATSPAQVVGSWNDITTSREQQDQLSFLTHYDPLTQLPNRTLLHL 454 Query: 341 --EQAPEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + A + + L +D+ + ++ +G +R L L++ + + Sbjct: 455 QLQDALAHIETGQDQLAILNLDLDHFKKINETFGFDFGDKILRQTAGRLKHLLRLEDSIA 514 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ E ++++ G + + R ++ + L + F + Sbjct: 515 RMGADEFVIIIQGENIAELASSISRRILHRLGTPLNIEDQELIVTTSVGISLFPEDGADP 574 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL + L +S + +++ + +R A+++ +L+L+ QP Sbjct: 575 ETLLKNAEIARYAAKRQGRNR-LHFFSSQLSDNVRENLVMESALRNAIERKELVLHYQPQ 633 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + G + ++ + + G++ P F+PL + L L VLE + Sbjct: 634 LDLNSGDLVGVEALVRWQRPEIGLVPPGLFIPLAEEIGLINDIGLWVLEEACRQTIDWDR 693 Query: 569 DKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 PR +VNL + ++ +++++ + + Q + LE+TE + + + Sbjct: 694 QGYHVPRMAVNLAVQQIESGHLPQQVLQILQYTGLPAQRLELEVTESAIMIEPKKAADAL 753 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + G R+AIDDFGTGY++ LKRL D +KID FV DI TN D +I R+I +L+ Sbjct: 754 LEFQSMGIRLAIDDFGTGYSSLAYLKRLPLDRLKIDRSFVMDIGTNAGDDIISRAIINLS 813 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + VAE +E Q L + G + QGYL +P P Sbjct: 814 NSLGMDTVAEGIENTDQLEFLRREGCEIGQGYLFSKPLPAD 854 >UniRef50_Q5P826 Response regulator receiver protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P826_AZOSE Length = 638 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 99/560 (17%), Positives = 199/560 (35%), Gaps = 20/560 (3%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R ++ FA IL ++ G E + ++ ++ L ++ Sbjct: 47 LRQLLEHEFATILLDVNMPGLDGFETARLIHGRPRSAAIPIIFLTAHRSDELDRIKGYEA 106 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + + LC + + + + L Sbjct: 107 GAADYLFTP-LVPQVLQAKVGVFVELCRQRRELEHKAALLADLNRELQVQRLEDLERANA 165 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + AL D LT N R+L Q + L +D Sbjct: 166 ALQTEVAERRGAEKLARELALRDTLTGFFNRRSLNDRLARAISVAGHQNDRLALLFLDLD 225 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G ++ + L ++E + L + G E +++L + Sbjct: 226 RFKRVNDSLGHDKGDELLKQVAARLRCAVREADTLARFGGDEFVVLLENLHDRDDAAQVA 285 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + ++ + + + + + + L+ ++ + Sbjct: 286 IKICAALAQPFELGASTVKVSASVGVSLYPDDGASASVLMKNADLAMYEAKQMGRN-GHE 344 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 E ++ + +++ + ++ AL+ + LY QP N G + +L G Sbjct: 345 FYREELNRRLLERIRHEHELQQALENDEFELYYQPKVNVVEGTIAGMEALLRWHHPQLGF 404 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQKNI 589 ++ ++F+ L + + L + + + R +VN+ L + Sbjct: 405 LSAEQFMGLAEEAGMLVPLGEWALRAACRQARQWQDAGWLEETVRIAVNVAEPQLYSA-L 463 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + RL + +SP + LEITE + + + + Q+ G IA+DDFGTGY++ Sbjct: 464 PDTLARLLDEHGLSPAHIELEITETLLMRDVDHAASVLAQIGATGVSIAVDDFGTGYSSL 523 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK L I+KID FV+D+ + IV +I +A A L+V+AE VE + Q L Sbjct: 524 AILKALPIHILKIDQSFVRDLPHDRDTHAIVTAIVQMAHALGLNVIAEGVENEAQLGALR 583 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 +LG QGYL +P P ++ Sbjct: 584 RLGCDEYQGYLYSKPIPASE 603 >UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG75_THIDA Length = 954 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 113/565 (20%), Positives = 201/565 (35%), Gaps = 26/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-CTPYENDFIAGYLVPVFF 248 + S + D A + + L + Sbjct: 371 LASRQLGETKDSLDRAQRIAQMGNWDWYIAENRLFWSEGIYRLFGLRQGQFEASYEAFLV 430 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM 308 ++ + + L + V + +L + ++ Sbjct: 431 RVYPSDRAAVDAAVQRALNTGAPYALDHRIVRPDGSVRVVHETGEVLLDALGKPSRMIGT 490 Query: 309 VRIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFC 353 V+ + A DPLT LPN L + Sbjct: 491 VQDVTHWREAEQALREKDAHLEHVAYHDPLTDLPNRALLLDRLRAAVSRNGRTGGRLAVV 550 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + +++ L L ++ + L +L G E +L+L G Sbjct: 551 FIDLDRFKTINDSLGHAVGDAVLQAAASRLRSLTRDGDTLARLGGDEFVLLLDGLRDNAA 610 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + R +H + L + + + + LL +S Sbjct: 611 AGAVAEKIITALERMLHVGSYPLHISASIGISLYPEDGRDAEALLRHADAAMYKSKERGR 670 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 E ++ + +++ L + +R A D L ++ QP+ G + +L Sbjct: 671 N-TFHFYEHGITERAMRRLQLESRLRRAFDDRTLQVHYQPLVRLDTGHICGAEALLRWND 729 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KKGPRFSVNLMPLTL 584 + G + PD F+ L L V+ + L + VNL L Sbjct: 730 PEAGAIPPDHFIALAEDTGLIVPIGEWVVGEACEALKRWETEILLPADFALHVNLSGKQL 789 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 LQK++ R+ F R +SP V+LE+TE + + + + L +FG IAIDDFGT Sbjct: 790 LQKDLPTRLSDAFTRAGVSPARVVLELTESSIMESEATGVAVMTALREFGVEIAIDDFGT 849 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 G+++ RLK L +KID F++DI ++ DA IV++I L+ L V+AE VE +Q Sbjct: 850 GHSSLSRLKLLPISELKIDRSFIRDIAVDSDDAAIVQAILALSAKLGLGVIAEGVEHAEQ 909 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 +A L + G QGY RP P + Sbjct: 910 EAFLMQHGCLRAQGYRYARPMPEDE 934 >UniRef50_C6E953 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=C6E953_GEOSM Length = 953 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 88/474 (18%), Positives = 190/474 (40%), Gaps = 18/474 (3%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTD 329 + + + ++ ++ ++ + S ++ + R + QA D Sbjct: 467 AVTHCEVVHVTRGGSQIYVSLTMSPIKSADGGIVGTSCIARDVTERTRMEEIIKHQAQHD 526 Query: 330 PLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN + QA + + +D+ + ++ G ++++ + Sbjct: 527 TLTDLPNRKLFGDFLNLELAQARRNRKSLAVLFMDLDHFKKVNDSLGHAAGDRLLQAVAQ 586 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 L ++E++ + ++ G E +++ + +V + L + Sbjct: 587 RLKRCVRESDTVARISGDEFNVLMPDLTQTDDVGIVVGKIMGVFRTPFVLEGAELKVTTS 646 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F + ++ Q LL + + + ++ +T + + +R A Sbjct: 647 VGVSMFPDDGDSAQELLQKADGAMYVAKQTPGN-SYQFYNGEINARTVARQNMERRLREA 705 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + + +L L QP+ + E G + +L + G++ P +FLP+ + V Sbjct: 706 VSKDELDLVYQPLLSLESGEIVGAEALLRWHHPEHGLLLPAQFLPVAEETGAIVPIGEWV 765 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 L + + + +VNL Q N +R + + P ++ L++TE+ Sbjct: 766 LFNACRQMRLWQSQGFDLSVAVNLSNREFHQPNFIDLAMRALSQSGLDPASLELDVTEKA 825 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N S+ N+ +L G ++DDFG G ++ R+K L +KID F++DI+T Sbjct: 826 IMDNPAFSLRNMRRLTDIGVAFSVDDFGVGASSLSRIKELPIAKVKIDRSFIRDILTEPN 885 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D +V ++ ++ + + V A VE+ +Q AL+ G +QG LI RP P + Sbjct: 886 DLDVVSAVICMSHSLKMRVNAVGVESAEQLALVGSFGCDEVQGDLISRPLPPHE 939 >UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWM6_METML Length = 651 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 101/647 (15%), Positives = 222/647 (34%), Gaps = 50/647 (7%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 R L L +V +++ + IS++ + + + Sbjct: 5 FRKRISKLDLIVLRIVGIYLAFGLLWIFATDSALFSLISSY----EEFSILNTYKGVAFI 60 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 + +L+ R + + + + + W + + + Sbjct: 61 FVTALLLYSLFRRTLKKQQSIEQSLQASEERWKFALEGSGDGVWDWDIPSDHVFRSARWS 120 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF-- 293 Y II T G+ L L++ QN+ G Y F Sbjct: 121 E----IYGYAENEIIATAVAGR------ELVHPDDLAILISDVQNYFAGNSNVYISEFRL 170 Query: 294 ----------------ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + + ++ + + A D LT LPN Sbjct: 171 RCKDGSWKWTLARGMTVSKSADGKPLRMIGTHTDITNRKRSEAQVTHLAHYDQLTGLPNR 230 Query: 338 RALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 + L +D + ++ G + ++ + R L +++ Sbjct: 231 VLFLDRFKQDIKKAQRTGQIVTLMFLDLDKFKEVNDSLGHDIGDMLLKDVARRLENCVRD 290 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDG 446 ++ + ++ G E ++L+ ++ ++ + + ++ H + + + + Sbjct: 291 SDTVARMGGDEFTIILNDINSQVNIERIAQDILNQLTMPFHLGDEVIHVSTSIGISNYPK 350 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + ++ LL + ++ + K++ L++ + AL+ + Sbjct: 351 DDTEVELLLKNADQAMYVAKEQGRNR-YQYFTPVMQEEALKRMRLISDLWGALNDNQFRV 409 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QPI + ++ G++ P+ F+P+ L + + + Sbjct: 410 YYQPIVELATGAIFKAEALIRWQHPTRGLVGPNDFIPVAEDTGLIVDIGDWLFNEVASQM 469 Query: 564 ATHPCDKKGPRFSVNLMPLTLL--QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + SVN P+ N + I R ++ +S + I+EITE + Sbjct: 470 VKWKQHYPNLQVSVNKSPVQFRSVHDNCSNWIER-LEQLGLSGENFIVEITEGLLLDARD 528 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 S + + + G +IAIDDFGTGY++ L++ D +KID F +I N+ D ++ Sbjct: 529 SVVSQLNAFREAGMKIAIDDFGTGYSSLAYLRKFDIDFVKIDRSFTSNITPNSSDMVLCE 588 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I +++ + V+AE VET +Q+ LL + QGYL +P + Sbjct: 589 AIIEMSHKLGMKVIAEGVETDEQRDLLRNADCDFAQGYLYSKPITVD 635 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 96/466 (20%), Positives = 184/466 (39%), Gaps = 24/466 (5%) Query: 284 GVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 ++Y + V+ + + + + + QA D +T LPN Sbjct: 211 KDGSDYLKEITINVIKDAAGTPINYVGVFSDITQRKKQEALIWRQANYDAVTTLPNRHHF 270 Query: 341 EQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + A + + + +D+ + ++ G + ++ L +Q + Sbjct: 271 QDKLERAVEHAKQSGRPMALMLIDLDHFKSVNDSLGHRAGDALLLAVSNRLTDCVQGADT 330 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++L+ G + L ++ + + + + F + + Sbjct: 331 IARLGGDEFAIILTDLHQNGDSGCLARTLLAQLAQPFNIDGESMLVSASIGIALFPNDSD 390 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 TL+ L + + + + ++ L N +RTA+ G +Y Q Sbjct: 391 TLEELFKNADQAMYAAKSAGRN-CFNYYTPALHQAARARLRLTNDLRTAIQCGQFEVYYQ 449 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 PI + + ++ G+++P +F+PL L V + LA Sbjct: 450 PIIELSTNKVVKAEALVRWRHPIRGMISPAEFIPLAEDTGLIVPLGDWVARQAITQLAQW 509 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGR--IIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + ++N P+ L K+ + ++ + AVI+EITE + Sbjct: 510 RKIFDPHFQVAINQSPVQLRSKDFTEMTWVQE-LAQHGLEGNAVIIEITEGLLLNAESRV 568 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 N+ G +IAIDDFGTGY++ L++ D +KID FV+D+ + + + +I Sbjct: 569 NDNLHLFRDTGIQIAIDDFGTGYSSLAYLRKFDIDCLKIDRSFVEDL--DGVGFELCVAI 626 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + L VVAE VETQQQ L ++G Y QG+L RP P + Sbjct: 627 IAMAHSLGLKVVAEGVETQQQCDTLARIGCDYAQGFLFSRPVPAPE 672 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 105/444 (23%), Positives = 183/444 (41%), Gaps = 30/444 (6%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + Q D LT LPN EQ +A + L +DN + + Sbjct: 199 ITERQSKE--LVHQYSHDLLTNLPNRILFVDRLEQSIGRRASRDAHLAVILLDLDNFKRV 256 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENE------------KLYQLPGSELLLVLSGPETE 411 + G I+ + L + NE L +L G E ++L ++ Sbjct: 257 NDSLGHKSGDLLIKQLGEDLRKVFLGNELARRYGIEASSITLSRLGGDEFGIILDEVDSL 316 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + +V L SR+ + + F + + L+ + Sbjct: 317 DLVVRIVQHLIEVISREHDIEGHQVFLTCSVGISVFPYDGDDADTLIKNADAAMYDAKQR 376 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + + ++ QT +Q++L N + AL + + ++ QP + + G + ++ Sbjct: 377 GRN-SFQFYTKDINSQTYRQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRW 435 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTL 584 + G+ P F+ + + + VL+ + + + D PR S+NL Sbjct: 436 RHPEKGLQPPANFIAIAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQF 495 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q ++ + + I+P + LE+TE + + ++ + QL+ G R+AIDDFGT Sbjct: 496 RQSDLVEQCRNTIRSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGT 555 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK D +KID FV+DI + D IV +I LAK+ L VVAE VET++Q Sbjct: 556 GYSSLNNLKHFPIDTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQ 615 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L +LG + +QGY RP P Sbjct: 616 LGFLKRLGCEIVQGYFFSRPLPFE 639 >UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC21_CELJU Length = 1306 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 117/506 (23%), Positives = 202/506 (39%), Gaps = 30/506 (5%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLL 306 F K++YP +L + L QG + L S+ L+ Sbjct: 784 FITTGAKIQYPDDHLFQLSNIDSYLGVGIRNPQGQHVGILIVMSEKALNVSPQVRSLLLI 843 Query: 307 YMVRIYHRSEWL--NRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLR 356 + RI + + A DPLT LPN R L + + Sbjct: 844 FAERISGELNRASDQEQIYRLAFFDPLTRLPNRRMLMDRLRLIIAQSARTSQQGALLFID 903 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-------- 408 +D+ + ++ G + + + + +++ + +L G E ++V Sbjct: 904 LDHFKLLNDTRGHHIGDQLLVQVAERISSIIRTTDLAARLGGDEFVVVFDNLGTDPDKAA 963 Query: 409 -ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E + R + + ++N + F+ N ++ LL Q+ Sbjct: 964 LEAKHRAEQLHELIN-LPYPLQQSVYHCTISIGVNLFNANNTSIDDLLRHADVAMYQAKD 1022 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG-DLLLYAQPIRN--KEGEGYDEILA 524 + + + + K+ + +R+A + G L Y Q N E G + +L Sbjct: 1023 GGRN-TIRFFDPHMQSRLEKRAEIEADLRSAHESGTQLTPYYQAQVNHTGEVLGAELLLR 1081 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPL 582 + G + P F+P+ Q L QV+ K L +VN+ P+ Sbjct: 1082 WIHPRKGTIAPGDFIPVAEQTGLIVAIGRQVIRMACKQLQCWQQQPGFGHLTLAVNVSPI 1141 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + +I Y ++P + LE+TE N E S+ +++L +FG A+DDF Sbjct: 1142 QFNQSSFVEDVISCVLDYDVNPNHLKLELTESSLLKNVEHSIEKMQRLQEFGISFAMDDF 1201 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 G GY++ LK+L D +KID FV+DI + DA+IVR+I +A +L+V+AE VET+ Sbjct: 1202 GIGYSSLSYLKKLPLDQLKIDRTFVRDITIDPNDAIIVRTIIAMAANMNLNVIAEGVETE 1261 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ L + G QGY G+P PL Sbjct: 1262 LQKQFLEQNGCLLFQGYYFGKPMPLD 1287 Score = 56.2 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 90/312 (28%), Gaps = 24/312 (7%) Query: 14 FTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFC 73 + L + + ++ ++ + I L W+P + ++ + + W V Sbjct: 18 WPLQLAVALA-YGITGWLGLNIPLSDGNITLFWLPTGIAVAAFYRYSWTLWPGVFLAALI 76 Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 +L + LG+ +L C +LR R + LG++ Sbjct: 77 VSLSTGLPWLNSGLIALGNTLAPLL-TCYLLRRTDSNITRLTPRDSIGFLLFSALGMIVS 135 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 L+ F + + + V + L Sbjct: 136 AATGSLSLLLLGREVFSVAQG----------FLNWWMGDSLGVFLAAPLL---------V 176 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 +F+ RR +A +AAL L L + I ++ FI Sbjct: 177 NFSLGECRRALAQPRELILIILASLVVAALCFPLNNLTSHSPAGVIHLPILFTSFICMAW 236 Query: 254 GVGKLRYPFLNLT-WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY--MVR 310 + P +L+ + L++ Q L+ + + F + LL + Sbjct: 237 AGLRFGLPGASLSTLGFGLVALVSTIQGLGPLSFDSTQLSAWMIWIYGFCMTLLGLMITS 296 Query: 311 IYHRSEWLNRRW 322 + + + + Sbjct: 297 AHTQLRTASHQL 308 >UniRef50_A5IG24 Sensory box protein/GGDEF/EAL domains n=6 Tax=Legionella RepID=A5IG24_LEGPC Length = 771 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 94/461 (20%), Positives = 188/461 (40%), Gaps = 19/461 (4%) Query: 282 LQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 ++ Y +A + + + ++ + + + LQA D LT LPN Sbjct: 293 IKRNGEFYWCEISVAPVKDSFGYVKHYICILNDVTQRRDMEDQLLLQATYDSLTNLPNRV 352 Query: 339 ALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L EQ +F L +D + + G M +++I LL + ++ Sbjct: 353 LLMDRVEQAILQARKNKAILAFLFLDLDRFKLTNDTLGHGMGDKLLQAIANRLLIVTEDF 412 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E +++L+ + + + + + I + L + + + Sbjct: 413 DTVARLGGDEFVILLTDIDNMLEAETIAQNILKIIEKPIQIDQHSLKITGSLGISFYPRD 472 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + + L+ + E ++ + + L N +R AL +L L Sbjct: 473 GDDYESLMKSADLSMYHAKDTGRN-NYRVYEPEMNRRVINHMQLDNALRDALKNDELFLV 531 Query: 508 AQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + G++ ++ G+++P F+P+ + + ++ + Sbjct: 532 YQPLIDLKQSRVVGFEALMRWHSKILGLVSPADFIPMAEENGMILEMGEWAMKQACIQVK 591 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 K +VNL QKN+ + R+ K + + + LE+TE + + Sbjct: 592 EWHKAGFKNLSIAVNLSGRQFRQKNLPEVVSRVLKSSGLQSRFLELELTESLLIEDIDHV 651 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L G ++ IDDFGTGY++ LK+ D +KID F+ ++V+N DA I ++I Sbjct: 652 VDTMYALKDMGTKLVIDDFGTGYSSLSYLKQFPVDKLKIDRSFITEMVSNQNDAAIAKAI 711 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +L + +L V+AE VE + Q+ + G Y QGY P Sbjct: 712 INLGHSLNLQVLAEGVENEFQRDFITSHGCDYAQGYFFKAP 752 >UniRef50_Q2BQ91 Multisensor diguanylate cyclase/phophodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ91_9GAMM Length = 852 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 89/435 (20%), Positives = 179/435 (41%), Gaps = 15/435 (3%) Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNL 360 V + + ++ QA D LT L N + Q + + +D Sbjct: 403 VVDITQRKQDEQKIWRQANFDQLTGLANRNYFTDSLSHTIDLAERQGDKFALLYIDLDRF 462 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G M + + L ++++ + +L G E ++LSG ++ +V Sbjct: 463 KQVNDTLGHSMGDKLLNDAAKRLKENSRKSDIIARLAGDEFAILLSGTGRPEVIEPLVTK 522 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L + + + F + + LL + ++ Sbjct: 523 LLNSLAAPYDLSGNETTISASIGIALFPEDGCEVADLLRKADSAMYKAKEDGRN-NFHFF 581 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKEGEGYDEILARLKYDGGIMTP 535 E + + ++ L + A++ + LY QPI + E + ++ G+++P Sbjct: 582 TEEIEKEALRKRQLEQDLNRAIENQEFELYYQPIETLDAEVISAEALIRWNHPLRGLVSP 641 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRII 594 +F+P + + +L A +L+ + P+ SVN+ +N+ + Sbjct: 642 IEFIPFMEETSLIAPLGEWILKQACQDAMHWDHHCSVPPKVSVNISTRQFQNQNMPALVK 701 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++ +S + LEITE + +S+++ + L G +++DDFGTGY++ LK+ Sbjct: 702 QILTDTGLSADRLTLEITESLMIDDEDSTIHQLNSLRLMGVALSVDDFGTGYSSLSYLKK 761 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 +KID F++ + D+ +V +I +A++ L VVAE VET Q L L + Sbjct: 762 FPVSYLKIDRSFIQGLPNCQEDSALVEAILSMAESLRLQVVAEGVETSSQANYLASLKCR 821 Query: 715 YLQGYLIGRPQPLAD 729 Y+QGY + +P P D Sbjct: 822 YIQGYWLSKPIPQHD 836 >UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W8B7_MAGSA Length = 682 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 110/513 (21%), Positives = 199/513 (38%), Gaps = 24/513 (4%) Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + A L F ++ + + +R+ L++N + L L Sbjct: 147 LVRQRAGAAIVLSGAFLLVTAVLLAAVRHLVTGPL--TRLRNSLHHNASVLMRE----PL 200 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 + + V ++ + H A D LT LPN R LE Sbjct: 201 VWSSRDELGEVVH--AYNQLLTEIDQRTEDIHQLANRDLLTGLPNRRLLEDRIGHAIALA 258 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 Q + IDN + ++ G +R I + +M+ + + + G E ++ Sbjct: 259 GRQNRSIALLFADIDNFKVVNDTLGHKQGDALLRIIADRIHDIMRGMDTVARWGGDEFVI 318 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 V+ + G + L + + L +G + + + L+ Sbjct: 319 VVESLNSAGEAASVAEKLIETIGVPVQLGSNLLRVGVSVGISMYPQDGADITTLIKNADM 378 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 ++ ++ ++ + +++ + +R A+ Q L L+ QP + Sbjct: 379 ALFEAKGRGRN-TFHFFDQAMNARALRRMDIEMALRQAIPQNQLELHYQPKIASASGALA 437 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 G + ++ + G++ PD+F+PL + +L VL + + G + Sbjct: 438 GVEALVRWRRPGEGLVQPDEFIPLAEESDLIVAVGEWVLNEACRQIRDWEARGFGEVAVA 497 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL P L + I R+ + + P + +E+TE E + + +L GF Sbjct: 498 VNLSPRHFLHEKDVDGIFRIVDQSGVRPDLIEVEVTESTFMHEPEKVIGYLNRLRDRGFG 557 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IAIDDFG+GY++ L+RL +KID FV DI N +A I+R+I +A A L ++A Sbjct: 558 IAIDDFGSGYSSLSYLRRLPITTLKIDRAFVMDIEHNADNAEIIRAIIAMANAMGLGLIA 617 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VE + Q L +QGY RP P AD Sbjct: 618 EGVENRHQFEFLRHADCGVVQGYYFSRPLPPAD 650 >UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica KT99 RepID=A9D5G8_9GAMM Length = 1066 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 100/459 (21%), Positives = 191/459 (41%), Gaps = 18/459 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA-------- 339 EY ++ + + + + + + D LT LPN Sbjct: 594 EYLAITVVKDDAGQIIQHIGLFLDISNRKQYEQNIWYKTHYDLLTKLPNRSLYTIKVQQE 653 Query: 340 LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + A E + + +D ++ + YG + +R + L L+ +++ + +L G Sbjct: 654 MTMAQENNRQVAILFINLDRFKYTNDIYGHEVGNKLLRQVASRLKSLVNKHDFVARLGGD 713 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +++L + ++Q + + +N+R + L + F N + + L Sbjct: 714 EFIIILPRIRRQHQVQAIADKVNARLASPFGVDGDDLMISASIGISLFPENGSSEELLTR 773 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---N 513 Q+ ++ +++ L +R A+ + + L+ QPI + Sbjct: 774 NAETAMYQAKNDGRN-NYRYYSSEMNEHILERIQLEQRLRQAVIRQEFCLHYQPIVNLDD 832 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 + G + ++ G++ PD F+P+ + L VL+ L LA Sbjct: 833 RTITGVEALIRWQDPKFGMIAPDMFIPIAEETGLIEPIGEWVLQQALTDLAHWHRLGFKI 892 Query: 574 RFSVNLMPLTLLQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 ++N+ LL +N + L K+ I PQ + +EITE + E M +E + Sbjct: 893 SMAINVSGRQLLGQNKTSFKCLLKALLKKNDIEPQYLHIEITESMLMDDTEQCMTVLESI 952 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G I IDDFGTGY++ LKR +IKID F+ +++ + DA ++++I + ++ Sbjct: 953 RSLGLDIYIDDFGTGYSSLSYLKRFPIAVIKIDKSFIDNMLESESDAKLIKAIVMMGQSL 1012 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L +VAE +ET Q +L LG + QGYL P P + Sbjct: 1013 ELKLVAEGIETHAQWQMLQALGCDFGQGYLFSHPLPAQE 1051 >UniRef50_Q1H236 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=Q1H236_METFK Length = 722 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 93/437 (21%), Positives = 186/437 (42%), Gaps = 16/437 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + R + + QA D LT LPN + + + L +D Sbjct: 260 GVARDISDRKKVEEVITRQAYHDTLTGLPNRALFKDRLNVALNHAKRNQQQLAIMFLDLD 319 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 ++++ G ++ + + L ++ + L ++ G E L+L + + Sbjct: 320 RFKWVNDTLGHFYGDELLKHVAQRLSGCLRAQDTLARMGGDEFTLLLHDLQQPEDASLVA 379 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + R + + + + + +T++ L+ Sbjct: 380 AKIVDELKRPFLLDEREIFISSSIGIALYPDHGDTIETLIKSADIAMYHVKWRGKN-GYQ 438 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 E ++ K++ + N +R A+++ ++L+ QP + ++ G + + + GI Sbjct: 439 YYEASMNAMFHKKLSMENELRRAIEKKQIMLHYQPQVDVETRKIIGLEALARWHHPELGI 498 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAG 591 ++P +F+PL + L +L K + R ++N+ P + +++ Sbjct: 499 ISPTEFIPLAEETGLIFSLSEMLLGEACKQMQLWEAAGLLNFRLALNVSPQLVEEESFVS 558 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + + + +H+ P+ +EITE + E+++ ++ L K G RIA+DDFGT Y++ Sbjct: 559 KTLSYIQSHHLKPEFFEIEITENLLVRDLENTVAKLKALGKHGIRIALDDFGTCYSSLSY 618 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L++ IKID FV DI T+ I+ +I+ +AK L ++AE VET QQ LHK+ Sbjct: 619 LRQFPIHNIKIDKSFVGDINTHDESVPIITAISGIAKGFKLDLIAEGVETLQQMKTLHKM 678 Query: 712 GVQYLQGYLIGRPQPLA 728 G +QGYL +P P Sbjct: 679 GCNIMQGYLFSKPLPAQ 695 >UniRef50_A0YPT5 Serine/Threonine protein kinase and Signal Transduction Histidine Kinase n=8 Tax=Bacteria RepID=A0YPT5_9CYAN Length = 2038 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 103/432 (23%), Positives = 177/432 (40%), Gaps = 16/432 (3%) Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDN 359 R + + + A D LT LPN L + +Q + L ID Sbjct: 1593 FRDITGRKQMEEKLISDAQHDALTGLPNRLLLSEHLQQMIQRTQEEQNYRYAVLFLDIDR 1652 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G ++ + +I + L + + + + +L G E +++L PE E R + Sbjct: 1653 FKVINESLGHLVGDQLLIAIAQRLKGCITQQDIIARLGGDEFIILLDNPEDEVRTAARIQ 1712 Query: 420 ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + N + + + LL Q+ A + Sbjct: 1713 MALNAPFNLNGYKVFNTVSIGIVSSNTTYTRPEELLQSADIAMYQAKAEGRAR-YVIFDT 1771 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + + T + L +R A++ L +Y QPI + G++ ++ L GI++P Sbjct: 1772 TMQERATSLLQLETDLRLAIEVEQLCVYYQPIVALKTGKLAGFEALVRWLHPKKGIISPI 1831 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAGRI 593 KF+PL + L VL+ L SVNL Q ++ RI Sbjct: 1832 KFIPLAEETGLIIPIGQWVLQQACYQLKVWQEQFPQLEKLTMSVNLSVKQFSQVDLIPRI 1891 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ + + LEITE +N E + + QL ++ IDDFGTGY++ L Sbjct: 1892 DQILSDLDLPGHDLKLEITESALMNNFERTRELLLQLKSRQIQLCIDDFGTGYSSLSYLH 1951 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + DI+KID FV+ + + + IVR+I L+ S++ +AE +ET QQ A L Sbjct: 1952 QFPVDILKIDRSFVRRLEGSNKNDEIVRTIIALSHNMSIAAIAEGIETSQQLAQLRNYRC 2011 Query: 714 QYLQGYLIGRPQ 725 +Y QGY RP Sbjct: 2012 EYGQGYFFDRPL 2023 >UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IZR7_NOSP7 Length = 664 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 96/520 (18%), Positives = 185/520 (35%), Gaps = 25/520 (4%) Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG--VETE 288 +E + P +I KL+ + W + + + L E E Sbjct: 138 LLNWELNLQPRGGKPFPAMIKASAAYKLQGKQVGWRWLLCNISERKKTEEMLHQAYDELE 197 Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA 348 +A A L+ + LL + + A D LT L N A Sbjct: 198 IRVAERTAELVKANQKLL---TEITERKRAESQLLHLAFYDILTGLANRAAFMNRLSHAI 254 Query: 349 G---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +D + ++ G + + + L ++ + +L G Sbjct: 255 NYSKRHSNYLFAVLFIDLDRFKVINDSLGHLNGDQLLLATASRLQVCVRSIDTAARLGGD 314 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDG-NQETLQPLL 455 E ++L G + + + + + + + + + +L Sbjct: 315 EFTILLEGIQDVSDVITVAERIQQELALPFELEGQEVFITASIGIALSSTLDYKHPEEVL 374 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q+ + ++ L +R A+++ + +Y QPI + Sbjct: 375 RDADTAMYQAKVQGRAR-YKLFNSDMYANALAKLQLETDLRRAIERLEFRVYYQPIVSLT 433 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP---CD 569 G++ +L + G++ P F+ L + L VL + + Sbjct: 434 KGSILGFEALLRWQHPERGLLNPADFISLAEETGLIFSIGKWVLHEACRQMQAWRMCHDS 493 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + SVNL Q ++ +I ++ + + LEITE +N + Q Sbjct: 494 NLLEKISVNLSLKQFSQPDLIEQIGQILHSTGLDADTLTLEITESVIVANGDKVTATFLQ 553 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G +++IDDFGTGY++ RL ++KID F+ + N + I+ I LA Sbjct: 554 LREMGIKLSIDDFGTGYSSLSRLYNFPISVLKIDRSFISLMSANKKNLEIIEIIATLAHK 613 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET++Q A L KL +Y QG+ P ++ Sbjct: 614 LGVDVLAEGVETKEQLAFLRKLKCEYGQGHFFSVPLNSSE 653 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 95/453 (20%), Positives = 177/453 (39%), Gaps = 16/453 (3%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS 351 + L + + + + QA D LT LPN Q S Sbjct: 451 ISPVKDLAGQIIHFVAVKEDITEQKRNRELLDHQANYDSLTDLPNRSLALDRLRQATALS 510 Query: 352 --------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 L +D + ++ G ++ I + L + + +L G E L+ Sbjct: 511 ERSNDTVIVMLLDLDRFKNINDTLGHSYGDCLLQEIAKRLRYHLPREITISRLGGDEFLI 570 Query: 404 VLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + + L+ + + S+ I L + + + T + L+ Sbjct: 571 ICPAVKENIHLEKLSQQLLKIISQPITIEAEELVITASIGVACYPNDGVTPEVLMRNADT 630 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 + + ++ + ++ L +R AL+Q L ++ QPI + Sbjct: 631 AMYSAKRNGGND-FQLFMPTMNAEAHARIQLETHLRHALEQYQLKVFYQPIISLQDNHVV 689 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFS 576 G + + + G + PD+F+P+ + L +V+E + +A + Sbjct: 690 GLEALARWHDPELGNIPPDRFIPIAEETGLIIPLGYRVIEQACQDVAIWQQKYNYPFWVA 749 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL P L ++ +R++ P + LE+TE+ N + ++ LH+ G Sbjct: 750 VNLSPRQLRSNRFTQITAKILQRHNFRPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIA 809 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY+ L+R +K+D F++DI +T +V++I +A + VA Sbjct: 810 LALDDFGTGYSALSYLRRYPFQSLKVDQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVA 869 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET +Q L +G +Y QGY RP P + Sbjct: 870 EGVETAEQVEFLKAIGCEYGQGYWFSRPLPAVE 902 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 99/492 (20%), Positives = 191/492 (38%), Gaps = 18/492 (3%) Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRI 311 + L +S L + + E S A A + V + + Sbjct: 353 AWAQFRELAGIHGLCSCMSLPVLDEHGEVLGTFALYERSGAMSGAAHMDQLVRARDLAAL 412 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 R L + QA D LT LPN + A + + +D + + Sbjct: 413 AMRHHQLTAQLRHQAQHDALTGLPNRSLFTERLAEILEQSERSRASTALLFVDLDEFKGV 472 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + ++++ LL + + + ++ G E LVL E + +LN Sbjct: 473 NDTVGHHVGDYVLQAVADRLLGCARRGDVVARVGGDEFTLVLPFAEEPHAITVARRVLNE 532 Query: 424 --RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 R +G Q LL ++ E + Sbjct: 533 LTRPFVVQGRAFHLGASIGISVSPQAGRDGQTLLRHADLAMYRAKRE--KSGFAVFEAQL 590 Query: 482 SGQTTKQVLLLNTIRTALDQGD--LLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + Q ++ L + +R AL + L L+ QP + + G + ++ G+++P Sbjct: 591 NQQAQLRLQLASDLREALREPGANLELHYQPQVRLHDGQVVGAEALVRWRHPHLGMVSPA 650 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ + V+E + G R +VN+ L + + + Sbjct: 651 QFIPVAEDTGMIVPLGTWVMEEACRQAVAWAAAGHGAMRVAVNVSALQFARPDFVDTVSA 710 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + +E+TE + + S+ +E+L G +A+DDFGTGY++ L+RL Sbjct: 711 TLRATGLEAGRLEVELTESAVMEDVKESVERMERLRALGVSVAVDDFGTGYSSLSYLQRL 770 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +++KID F++++ N +V++I LA+ +L VAE VET ++ L ++G +Y Sbjct: 771 PLNVLKIDRTFIQNLGVNATSRSVVQAIVGLAQHLNLECVAEGVETPDEREALIEVGCRY 830 Query: 716 LQGYLIGRPQPL 727 QG+ +P P Sbjct: 831 AQGFFFAKPLPA 842 >UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPZ0_9BACI Length = 975 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 98/462 (21%), Positives = 184/462 (39%), Gaps = 16/462 (3%) Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 G + + I + V L + R + + A D T LPN + Sbjct: 499 SGEVQLFHIKNIPITVDGHCVGLFGIGRNITEQKKTEEKITYLAYFDAETGLPNRIKFRE 558 Query: 343 --------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 A +++ L ID + ++ G + + + + + L Sbjct: 559 LAEEFISRAKKKKRRIGVLFLDIDRFKLINDTLGHSAGDQILIELAERIKNALPKGAYLG 618 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 + + +++S T +L+ + ++ I N + G + + L Sbjct: 619 RFGSDKFTILISKNVTNEKLKQVAELIAENIQMPIIQGNQEFYIKASIGVGVYPDHGTDL 678 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL + ++ + ++ ++V + + +R AL++ +L + QPI Sbjct: 679 ADLLKNADTALNWAKSNGGDQIV-FYTNEMNIMAMEKVKMESYLRKALEREELYIVYQPI 737 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 +K G + +L G+++P +F+PL + L VL K Sbjct: 738 VELNDKRVIGAEALLRWNHPYLGVVSPMEFIPLAEETGLIGSIGNWVLTEACKQAKEWQE 797 Query: 569 DK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 SVN+ Q + I K +S +++ LE+TE ++ ++ + Sbjct: 798 KGFPDFYISVNVSANQFQQPSFTNEINHALKTSGLSAESLCLELTESVMIQHSGHTIDRM 857 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 E+L G +IAIDDFGTGY++ LK L ++KID FV++I ++ D IV++++ + Sbjct: 858 EELAALGVKIAIDDFGTGYSSLGYLKHLPLHVLKIDKSFVQNIEESSPDYAIVQAVSMMG 917 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 K + VV E +ET +Q LL L QGY I RP + Sbjct: 918 KGLGMQVVVEGIETSEQMVLLSHLNCDLGQGYFISRPVFPDE 959 >UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K9S9_CYAP7 Length = 1015 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 97/455 (21%), Positives = 179/455 (39%), Gaps = 21/455 (4%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA- 348 S ++ +L + R + + AL D LT LPN L + + Sbjct: 546 SRQVLVQDDRGQIKGILEVNRDITERKLAQFQLEHNALHDALTELPNRLLLMERIQAAIQ 605 Query: 349 --------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + + +D + ++ G ++ H + +I L ++ + + +L G E Sbjct: 606 RAKRKPHYHFALLFIDLDRFKTINDTLGHLVGDHLLVAIATRLQHCVRSGDTVARLGGDE 665 Query: 401 LLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP-LLG 456 +++L E + + + NN + F+ + + LL Sbjct: 666 FIILLDDLLEESDAFPITERILGRIKEPLVINNQQIQTSASIGI-VFNRDGNESETDLLR 724 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG 516 + + + + N +RTALD + LL+ QPI + Sbjct: 725 NADLAMYSAKEQGKSR-YAVFNPTMHLRAHTLWEIENNLRTALDGQEFLLHYQPIFSLTT 783 Query: 517 ---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G++ ++ G+++P F+P+ + L VL+ + L G Sbjct: 784 QTLVGFEALIRWRHPVRGLISPMDFIPVAEETGLIVPIGEWVLQEACRQLLHWQELNPGA 843 Query: 574 R---FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + S+NL L N I ++ ++ +S + + LEITE N E++ + +L Sbjct: 844 KCCFMSINLSSRQLESGNFIAVIDQILQQTPLSAKNLKLEITETLLMKNLEAASALLLEL 903 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 ++IDDFGTGY++ L L D +KID FV + ++++I LA Sbjct: 904 KNRAIGVSIDDFGTGYSSLSYLCHLPVDSLKIDRSFVAKMDKGRESLQVIQAIISLAHQL 963 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +L V+AE +ETQ LH L +Y QGY + +P Sbjct: 964 NLEVIAEGIETQDHLTQLHHLKCEYGQGYFLSKPL 998 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 91/469 (19%), Positives = 180/469 (38%), Gaps = 24/469 (5%) Query: 281 FLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + E+ + L L + + + + + QA D LT LPN Sbjct: 533 LRRKNGEEFVVWLTLNALFDAEAQTQRHVALFSDITEKKQAEKIIWKQANYDTLTGLPNR 592 Query: 338 RALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 R L +E + L +D + ++ G M + + L +++ Sbjct: 593 RMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTLGHDMGDMLLSEAAKRLKACIRD 652 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 ++ + +L G E +VLSG + + + + + + + Sbjct: 653 SDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAEPYNLGEETAYISASIGITLYPD 712 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + T++ LL + + ++ L+ +R+A+ + L Sbjct: 713 DASTIEGLLKHADQAMYAAKDEGRNR-FHYFTPSMQRYAKYRMRLIQDLRSAIADHEFEL 771 Query: 507 YAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QPI + +G + ++ G+++P +F+ + + L V + + Sbjct: 772 YYQPIVSLQGGLGLKAEALIRWRHPKRGLVSPIEFIAVAEETGLIIEIGNWVFQQAARQS 831 Query: 564 ATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIR---LFKRYHISPQAVILEITEEQAFSN 619 A + S+N P+ + I L K +++ + +EITE Sbjct: 832 ALWRDRFGIEVQISINKSPVQFRDEG--ESINSWVNLLKTLNLTNNNICIEITEGLLLDG 889 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + + Q G +I++DDFGTGY++ LK+ D +KID F +++ +N+ D + Sbjct: 890 NSAISSKLTQYRDSGIQISLDDFGTGYSSLAYLKKFDIDFLKIDQSFTRNLDSNSDDFTL 949 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I +A + V+AE VET Q+ +L G + QGYL RP P+ Sbjct: 950 CEAIIVMAHKLGMKVIAEGVETDYQRKILANAGCDFGQGYLFSRPVPVE 998 >UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Burkholderiaceae RepID=B2JUP6_BURP8 Length = 980 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 98/473 (20%), Positives = 177/473 (37%), Gaps = 20/473 (4%) Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + +L E L I S +L + R QA D L Sbjct: 492 GQFELRWLSKDGQEQCSHIRLTPEIDPSGKVNSVLAVGRDLSDRMAFEAAIWQQANFDTL 551 Query: 332 TLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN + + EQ + + +D + ++ G + R + Sbjct: 552 TQLPNRQMFQNRLEQEAKVAQRSGHRMALMLIDLDRFKEVNDSLGHDTGDTLLIEAARRI 611 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 ++E++ + +L G E ++L + G ++ + + S + Sbjct: 612 TSCVRESDTVARLGGDEFTVILPDIDNCGSIERIARTIIETLSEPFALGPDEAFISASIG 671 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + L L + L+ + K++ L + +RTAL Sbjct: 672 VTVYPDDARELDVLFKNADQAMYAAKNAGRNR-LNYFTPDLQVAAEKRLRLTSDLRTALP 730 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 LY QPI + + + ++ L + G+++P F+PL L V Sbjct: 731 HDQFRLYYQPIVDLSTGDIFKAEALIRWLHPERGMVSPLDFIPLAEDTGLIVPIGEWVFR 790 Query: 558 SLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN-IAGRIIRLFKRYHISPQAVILEITEEQ 615 ++ + SVN+ P+ + Q N + R + Q++ +EITE Sbjct: 791 QAVQQAKLWRQRFHPSFQISVNMSPVQIRQDNQLGALWSDYLTREGMPGQSIAIEITEGL 850 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + + G RI+IDDFGTGY++ LKR D +KID FV+++ + Sbjct: 851 LLHADLNIDARLATFRHAGIRISIDDFGTGYSSLAYLKRFDIDFLKIDRSFVQNLGFDAD 910 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + ++ LA L V+AE VET +Q+ L +G + QG+L +P P Sbjct: 911 NQALCEAMVVLAHKLGLKVIAEGVETVEQRDFLTAVGCDFAQGFLYSQPVPPD 963 >UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN4_CHRVO Length = 679 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 97/432 (22%), Positives = 171/432 (39%), Gaps = 19/432 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFM 363 R A DPLT LPN ++ + + + +D + + Sbjct: 232 IQERRRAEERLDHLAHHDPLTGLPNRLLFQKRLSRALSVPDLPPYKLAMLFIDLDRFKDV 291 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + ++ L ++ + L +L G E + VL E + L + Sbjct: 292 NDTLGHYIGDQLLNAVAARLADSIRAEDMLARLGGDEFICVLESIENRDMAADVAGKLLA 351 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + N L + + + LL + Sbjct: 352 LFRQPFCINGNDLYLSASIGISFAGNDGADVDTLLRHADIAMYSAKNAGRNRC-QHYSPQ 410 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 +S ++V+L +R ALD ++ ++ QP + + G + + G++ P + Sbjct: 411 MSEDAEQRVVLERQLRQALDNDEITVHYQPQVDAVTGKLVGAEALARWRHPILGMVPPAR 470 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + L Q+LE L+ LA+ SVNL L +++ + RL Sbjct: 471 FIPVAEECGLIVALGEQILEKSLRQLASWHEAGFPLPSVSVNLSARQLERQDFPQHVARL 530 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 KRY + P+ + LEITE + E ++ + +L G R++IDDFGTGY++ L++L Sbjct: 531 LKRYRLEPRHLELEITESVIMA-TEDAVNILAELRAQGIRLSIDDFGTGYSSLSYLRQLP 589 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 ++K+D F+ I IV +I L+ + L VAE VE Q L G + Sbjct: 590 VQVLKVDRSFILGIGKGGE--AIVHAIMALSSSLGLETVAEGVEEASQLEFLRSAGCHII 647 Query: 717 QGYLIGRPQPLA 728 QG+L P P Sbjct: 648 QGFLYAAPLPAE 659 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 79/416 (18%), Positives = 163/416 (39%), Gaps = 15/416 (3%) Query: 328 TDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN A + + +D ++ G + + Sbjct: 121 YDTLTGLPNRDLFGDRIGQAVLQANRTGASVALMTMGLDRFTLVNDALGHGAGDRLLMEV 180 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--RQIHWNNTGLDMGY 437 R L ++E + +L G + LV++ +T+ + LN+ + + + + Sbjct: 181 ARRLKMCVRETDTAVRLDGDKFALVMAIADTDDSVIVAEKALNAVKEPFALDGQEVVVTF 240 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + ++ L+ + + ++ + ++ L +R Sbjct: 241 SIGISVYPLDADSSAQLVKHAENALHYAKVSGRNQ-YQFFSKDMNRKAKSRLELEGRMRR 299 Query: 498 ALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL + +++ QP + + G + ++ + + G++ P +F+P+ + Sbjct: 300 ALANQEFVVFYQPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQIEPIGTW 359 Query: 555 VLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + SVN+ ++ + + + P+ + LEITE Sbjct: 360 VLRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLELEITE 419 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 ++ ++++ ++ L G ++IDDFGTGY++ L R +KID F+ D+ TN Sbjct: 420 SMLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADVDTN 479 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A I R+I L++ +L VVAE E + L G +QG+ RP P + Sbjct: 480 PKTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADE 535 >UniRef50_C6X7M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7M1_METSD Length = 1237 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 107/445 (24%), Positives = 177/445 (39%), Gaps = 16/445 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------- 351 +L + R +R H A D LT LPN L + + Sbjct: 776 DGTVASVLAVGRDITEIVEYRQRIHDMAFYDALTRLPNRAMLLEQMRSGILAAAGAQQVF 835 Query: 352 -FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +D + ++ G + L ++E + L ++ G E +L+L + Sbjct: 836 SLMVLDLDRFKQINETLGHSTGDLLLCEAAARLQDHLREGDMLARMGGDEFVLLLRPGDA 895 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E L M L + L + R+ + + LL + A Sbjct: 896 EPELIAMAQTLIQAFRQPFLVAGRELFVSTSVGIARYPTDSQDADTLLKFADTAMYHAKA 955 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 ++ ++ ++ L +R A+ Q +L LY QP + G + +L Sbjct: 956 QGRN-NFQFYVSALTEVSSARIELETMMRRAIQQQELELYYQPQWDLLENRIVGVEALLR 1014 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT 583 + + G+M P+ F+P+ + L VL + + DK + + +VNL Sbjct: 1015 WNQTEHGLMMPNVFIPVAEETGLIIELGEWVLTTACRQAVQWNKDKDEPLKIAVNLSTRQ 1074 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +Q + + R+ P+ + LEITE + + + G I+IDDFG Sbjct: 1075 FIQNPLLASVTRILHETGCRPEWIKLEITESLLLESNLDILNTLNAFDAMGLVISIDDFG 1134 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY+ L R IKID FVKD+ +T + +V+++ +A +L VVAE VETQ Sbjct: 1135 TGYSALSYLNRFPVKQIKIDRSFVKDVPHDTHKSELVKAMISIAHVLNLDVVAEGVETQV 1194 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q L G + +QGY GRP PLA Sbjct: 1195 QSDYLKASGCRAVQGYFYGRPMPLA 1219 >UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Shewanella RepID=A0KRF8_SHESA Length = 1077 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 112/633 (17%), Positives = 228/633 (36%), Gaps = 31/633 (4%) Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 + LF I + ++ SF KI+ A + ++ + Sbjct: 429 LLGLYLFSAIFTAAITLWLGRKIIRSFMVKITKIANDMQQMAADPQL-NINIDASGTDEL 487 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + + RMI A R A + + + I Sbjct: 488 ARMAQAMNRMISERQKANHALSRAAAVFNYSAEG------IMVTDADNHIELINPAFSQI 541 Query: 240 AGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY + + + + A+ + Y + Sbjct: 542 TGYSLEEVKGRSPSILSSNRHPHHYYTAMWEALHKEGKWEGEIWNKRKDGQVYPEYLAIT 601 Query: 297 VLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------ 347 V+ + ++ + + + + QA D LT LPN + + + E Sbjct: 602 VVRNEQGEIIQHIGLFMDISKRKQYEQDLWYQANFDTLTGLPNRKLFNERLQHEIQLAQH 661 Query: 348 --AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D ++++ G ++ + + L + +N+ + ++ G E +L+L Sbjct: 662 DSRKLAILLIDLDQFKYINDVQGHATGDLLLQDVAKRLENIAGKNDFVARIGGDEFVLIL 721 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 E ++HM + + + + N + + G + + + L Sbjct: 722 PRVTNEFAIEHMASRIIETLATPFNLNEREIQISASFGIGVYPEDGLDVSSLTRNTEMAM 781 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 Q+ ++ ++ L +R A+ Q + L+ QPI + + Sbjct: 782 YQAKDAGRN-NFKYFTSGMNQAMFARMELEQRLRRAVAQDEFTLFYQPIVDMKTGQICSV 840 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + ++ D G++ PD+F+ + + L VL + L ++N+ Sbjct: 841 EALIRWQDPDLGLIPPDQFIAIAEETGLIEPMGEWVLNQAMHDLRQWQHMGLNLNVAINV 900 Query: 580 MPLT---LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 + F R+HI+P+ V +EITE +A + +E + G + Sbjct: 901 SSRQCINTRGIGFDQVLQECFNRHHINPRNVHIEITESMLMGDASHCLSTLESIRHLGSQ 960 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I IDDFGTGY++ LK+ +IKID FV+ + N +A +V++I + ++ + +VA Sbjct: 961 IYIDDFGTGYSSLSYLKKFPISVIKIDRSFVEHALENCSNANLVKAIVMMGQSLEMELVA 1020 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E +ET+ Q L LG Y QGYL+ +P P + Sbjct: 1021 EGIETEAQWQFLRDLGCHYAQGYLLSKPLPFDE 1053 >UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VBK7_DESVV Length = 1413 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 108/503 (21%), Positives = 190/503 (37%), Gaps = 22/503 (4%) Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + + +G+ + W + L + + AF + + Sbjct: 891 LLLSYEDLLGRAYIGTIASVWLGTPLRVRGKVIGAMVLQHYSDPDAFSDSDARLMTSLAD 950 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRI 357 + + + AL D LT LPN L + EQ + + + Sbjct: 951 QIAVAI-ERKQNEEQLTYLALHDSLTGLPNRTLLLERIEQARLRSLRGKGRSFAVMMIDL 1009 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ +G + ++ + + P+++ + + +L G E ++L T + H+ Sbjct: 1010 DRFKIINDSHGHAVGDRLLQMVSAAVRPVLRPADTVARLGGDEFAILLEDVATPREVVHV 1069 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + R N L + LL Q+ Sbjct: 1070 ARRVIKAVERPARVANKLLRTSASVGIVLRTDGYGSADELLRDADIAMYQAKEQGRGR-F 1128 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGG 531 + Q + L N + AL G L QP+ + G++ ++ G Sbjct: 1129 RVFNRTMHQQAMDAMNLENDLGAALRWGQFELDYQPVFDTRSRALLGFEALVRWRHPLRG 1188 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKN 588 ++ P F+P+ + + R VLE+ L LA +VN+ L Q Sbjct: 1189 LIPPTAFIPVAEETGIITRLGHWVLETALTALARWRLQIPGIDDLYVAVNMSALQFAQPT 1248 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + G + ++ + + +EITE + +++ I L G I IDDFGTGY++ Sbjct: 1249 LPGSVRDALQKTGLPASCLKVEITETAIMQDPTTALQRISALRDLGVGIGIDDFGTGYSS 1308 Query: 649 YERLKRLQADIIKIDGVFVKD--IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 L+R D +K+D FV + IVR++ LA + SL+VVAE VET++Q A Sbjct: 1309 LAYLQRFPVDTLKVDRSFVSQSTTPEGEGNREIVRAVVVLAHSLSLAVVAEGVETEEQFA 1368 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L LG +QGYL+ RP P AD Sbjct: 1369 FLAGLGCDAVQGYLLSRPVPEAD 1391 >UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5U6_ALHEH Length = 802 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 105/432 (24%), Positives = 179/432 (41%), Gaps = 18/432 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + R A DPLT LPN L EQ + L +D + ++ Sbjct: 358 QLRQHQARLTHLANHDPLTDLPNRLLLTTRLEQAVARATGSGQRVAVLFLDLDRFKNIND 417 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + +R + L + E + +L G E +++L G + L Sbjct: 418 SLGHAVGDDLLRILAERLRSQV-EANTVARLGGDEFIVLLDGISDLELVDQQARELLELV 476 Query: 423 SRQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + L +G F N + L+ Q + A + + Sbjct: 477 AESFSVGGWRSLQVGGSIGISLFPDNAQDASELITQADAAMYLAKAEGRN-TYRYYNQSL 535 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + ++++ +R AL+ L ++ QP + G + ++ + G++ PD+F Sbjct: 536 TAAASERLETETRLRRALELDHLEVFYQPQLDITTGALTGVEALVRWRDPEQGLIPPDRF 595 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + L R QVLE +A D +VNL + + +I Sbjct: 596 IPVAEETGLIDRLGQQVLERACLQVAAWDRDGLPALDVAVNLSAHQIGDPRLCAKIRHAL 655 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 +R ++P+ ++LEITE + AE ++ + L G ++AIDDFGTGY++ LKR Sbjct: 656 ERSGLAPRRLVLEITESTLMTQAEGALGTLAGLKGLGVQVAIDDFGTGYSSLAYLKRFAI 715 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +K+D FV+D+ + DA + ++I +A L V+AE VETQ Q L LG Q Sbjct: 716 DWLKVDRCFVQDLPEDRNDAELTQTIVYMAHNLGLRVLAEGVETQAQLDFLTHLGCDGWQ 775 Query: 718 GYLIGRPQPLAD 729 G+L P P + Sbjct: 776 GFLCSPPLPPQE 787 >UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Enterobacteriaceae RepID=C8QI00_9ENTR Length = 949 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 101/451 (22%), Positives = 188/451 (41%), Gaps = 18/451 (3%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----APEQE 347 A +A ++ +V + R H A D LT LPN Q A + Sbjct: 496 ATTIAGKDLRQNFVMLIVEDVTDQREADARIHHMAHHDNLTSLPNRILFRQKLSEALRAD 555 Query: 348 AGK----SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + CL +DN + ++ G + +R++ + L ++++++ L ++ G E + Sbjct: 556 TQGGYITATLCLDLDNFKNVNDALGHQIGDDLLRTVAKRLRNVLRDHDTLARIGGDEFAI 615 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 VL + L ++ L +G T + +L Sbjct: 616 VLPNIRNADEAAVVAQRLIEAIRPPVNLEGHNLSVGLSVGIALSSQAANTPEHMLRCADM 675 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GE 517 ++ + + + + ++ N +R A+ L LY QPI + Sbjct: 676 ALYEAKRNGRNR-YEHFTLEMDDLARSRRVIENDLRDAISGRQLKLYYQPITDGNEKGII 734 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 GY+ ++ G++ P+ F+P+ + L L + A+ ++ SV Sbjct: 735 GYEALMRWHHPIKGLIMPNDFIPIAEETGLIHLLGAYALYEACREAASWEGEQ---SVSV 791 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL PL ++ + + ++P + +EITE +A ++ ++ L G +I Sbjct: 792 NLSPLQFKNSSLISVVEGALRESGLAPHRLEVEITESVLLDDALGNIRTLQNLKALGVQI 851 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 A+DDFGTGY++ L+ D IKID F+ D+ + I+R+IT ++++ + + AE Sbjct: 852 ALDDFGTGYSSLSYLRSFPFDKIKIDKSFINDMGDSREALAIIRAITGMSRSLDIQITAE 911 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VE+ +Q A L + G QGYL GRPQP Sbjct: 912 GVESSEQFARLREEGCTLFQGYLFGRPQPSE 942 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 97/461 (21%), Positives = 179/461 (38%), Gaps = 20/461 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 E + + + + + A D LT LPN + + Sbjct: 743 ERKTITAVRSANGDITHYVAISSDISELKRTEEKIRQLAYYDSLTGLPNRSLIFERLTQQ 802 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + + +D + ++ G M + + L +++ E +L G Sbjct: 803 MKAARREGTYGALLFMDLDYFKTLNDSLGHHMGDRLLVQVAERLKNCLEDEEAAARLGGD 862 Query: 400 ELLLVLSGPETEGRLQ--------HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L+ + + V L S ++ + F T Sbjct: 863 EFVVLLAPAKPSASVAAGQAIVHARRVRELLSAPFQLDDYVHYISVSIGIALFPDGANTA 922 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + +L Q + + E + ++ L +R AL + +Y QP Sbjct: 923 EDVLKQADTAMYVAKNEGRD-GVRFYESAMEAVVRGRLELEKALRKALANDEFEVYYQPQ 981 Query: 512 R--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G + ++ + G ++PD+F+P+ Q + R VL LA Sbjct: 982 MLGDGRVVGAEALIRWFHPERGAISPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRAR 1041 Query: 570 KKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + SVN+ P ++ ++ ++ + +SP + LE+TE ++ E ++ I Sbjct: 1042 GLALPKLSVNVSPRQFMRSDLMTQLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIG 1101 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +L G +IDDFGTGY++ LK L D +KI FV+D+ ++ DA IV +I +A+ Sbjct: 1102 RLKNLGVSFSIDDFGTGYSSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMAR 1161 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET+ Q +L + G QG RP P D Sbjct: 1162 HLGLDVIAEGVETRTQVEILERYGCHRFQGNYFARPLPKDD 1202 >UniRef50_A6W3H5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3H5_MARMS Length = 804 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 91/470 (19%), Positives = 183/470 (38%), Gaps = 23/470 (4%) Query: 281 FLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + + ++ + L R + + + A D LT LPN R Sbjct: 317 YHRSSGVSFPVEVCGNIITLDHEAHFLASFRDITQRKLDQEQVKFLAYYDALTNLPNRRF 376 Query: 340 LEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L Q A + +D + ++ G + + + +L + + + Sbjct: 377 LNQNIEKVITTAQNNGYIGGLLFIDLDRFKNINDSMGHHVGDALLVEASKRILACLSQAD 436 Query: 392 KLYQLPGSELLLVLS-----GPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGR 443 ++ G E +L++ E + R+ + L S+ T L + Sbjct: 437 IAVRMGGDEFVLLIPVLGDNAEEAQSRVTLLAETLLSQLCQVFRLEQTDLFISASIGISL 496 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F + +L Q ++ A + + Q ++ L + A+ + Sbjct: 497 FPFDGANDAQILRQADTAMYEAKESGRN-AYRFYRQEMQQQVAERAALEKALHRAISNDE 555 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP N + G++ ++ + G++ P++F+P+ + L VLE++ + Sbjct: 556 FYLVYQPQVNEHGQLIGFEALIRWSNEELGLVPPNRFIPIAEEIGLIYDVGNWVLENVCQ 615 Query: 562 WLATHPCDKKGPR---FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 L P ++N+ P ++ + + R + + LEITE Sbjct: 616 QLKAWQDIGLPPTFKGVAINISPYQFAKECFVESVCDVIDRTQVDSSLLDLEITEGMLVE 675 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N S + +L + R +IDDFGTGY++ L+ + +KID FV+D+ ++ + Sbjct: 676 NIASVAEKMWRLKEHNIRFSIDDFGTGYSSLRYLQHFPINQLKIDQSFVRDLTSDPQSHV 735 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I+ +I +A +LSV+AE VE Q ++ +L +G QGY +P Sbjct: 736 IINTIVSMATHMNLSVLAEGVEHQVEKDILENMGCAKYQGYFFSKPVKAD 785 >UniRef50_A1SWE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SWE1_PSYIN Length = 703 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 105/500 (21%), Positives = 200/500 (40%), Gaps = 31/500 (6%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRS 315 Y +L + + F + + VL L+ +++ Sbjct: 200 YVLTSLQALIEKKIPYDIEYRFRRPDGKVIWIWDRGQVLEYDDQGKPKLLVGIMQDITEK 259 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 ++ L A D LT+LPN L E + L +DN + ++ Y Sbjct: 260 KFNQSEIELMAFYDTLTMLPNRALLNDRLNLAIEHSKRFEKYGAVLFLDLDNFKILNDSY 319 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNIL- 421 G + + + + ++++++ + + G E ++VL+ ++E Q + + Sbjct: 320 GHQAGDDLLVIVAQRIQSVIRKDDTVARFGGDEFVIVLNELDSEPVKAAIKAQRLAQSIC 379 Query: 422 --NSRQIHWN------NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 ++I+ + + F G + LL Q+ + + Sbjct: 380 HSIKQKINIKISNMAADIDYFITASVGITIFYGQSKVPSELLQLADLALYQAKKNGRDDS 439 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGG 531 + ++ + L +R +L Q D +LY QP + + + ++ + G Sbjct: 440 -AMFDPVMQEKLDYSTCLDKELRQSLKQKDFVLYYQPQYDAKQNLVSAEALIRWNHPELG 498 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNI 589 ++ P F+ + + NL VL + L + SVN+ + QK+ Sbjct: 499 LVNPGDFIKVAEESNLILPIGDWVLSEACQQLKKWQSDPQYQHLSLSVNISAKQIWQKDF 558 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I R+ I+ + LEITE + + + L FG ++DDFGTGY++ Sbjct: 559 VAGIKRIVSDSDINVSKLKLEITESILLRDINGTAEKLNDLVAFGLTFSLDDFGTGYSSL 618 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK L D +KID F++D+ N +D ++V+SI DL K ++VVAE VET+ +L Sbjct: 619 GYLKNLPIDELKIDQSFIRDLFDNKMDLIMVKSIIDLGKNFGINVVAEGVETEAHFEILK 678 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G + QGY RP P+++ Sbjct: 679 EFGCKIYQGYYFSRPVPVSE 698 >UniRef50_Q07XP4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07XP4_SHEFN Length = 829 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 105/506 (20%), Positives = 194/506 (38%), Gaps = 19/506 (3%) Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 D + + V + + L P + + N + + A Sbjct: 302 DALHQKIEDVMHLKDSDTQQPLLNPLYLALREQRIVA-MALNSLLTSRGGHVFYVEDSAA 360 Query: 297 VLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------- 345 + + + ++ + + + + A D LT LPN L+ Sbjct: 361 PIRNENGEMIGAIMVFHDVSEAMAMAMKMSHLANHDQLTDLPNRILLQDRLSVACSTARS 420 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + ID+ +F++ G I + R L L+ + L +L G E ++++ Sbjct: 421 YGTKAAALLIDIDHFKFLNDSLGHQYGDELICMMARRLRSLIPASYTLARLGGDEFVILM 480 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 S + + + L +N ++ F + + L+ Sbjct: 481 SETRSVEASSQLASTLVEAMHEPFVLDNQKFNVSISIGVSVFPNDAVDAEELMRHADVAM 540 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGY 519 ++ + ++ L +R AL +L ++ QP + + G Sbjct: 541 YRAKQEGRNR-FCFFSHDLESSLMERHHLETRLRKALINDELFVHYQPKIDLQTNIIIGA 599 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + ++ +G +++P +F+PL + L QVL SVN+ Sbjct: 600 EALVRLANDEGELISPAEFIPLAEESGLIIMLGKQVLNKACAEAKRWLEMGHTIPISVNV 659 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 ++AG I + +++ + LEITE +A + +L G +IAI Sbjct: 660 AAAQFADPDLAGMIKKALLDHNLPAHLLELEITETALMIDAADMQNKLSELISLGIKIAI 719 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK+ D++KID FVKD++ N D IV++I L K+ L ++AE V Sbjct: 720 DDFGTGYSSLAYLKKFNVDVMKIDMSFVKDMLNNKHDYEIVKTIISLGKSMGLVLIAEGV 779 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQ 725 ET++Q L +LG QGYL RP Sbjct: 780 ETKEQSHALVELGCFMGQGYLFSRPL 805 >UniRef50_B3E7H1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E7H1_GEOLS Length = 933 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 110/651 (16%), Positives = 204/651 (31%), Gaps = 32/651 (4%) Query: 107 QLGTRWRYGLTSRYVW-QRLFWLGLVTPIGIKCSMYLVGSFFDFPLK-ISTFFGDADAIF 164 L+ + + PL +++ + Sbjct: 270 AASYPETDAYAPVRTARTWFIIATLLGMAVAVLLVLFMMRLLTRPLAQLASHVAELPEKR 329 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 + L I N+ + + + Q L + + E W Sbjct: 330 GAERFIHLPVNGEIGNLTGAFNSMVEEIDQSTQALRNSEQRYRIVTEFTNDFTYWRRPDG 389 Query: 225 VLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST-------LCLLNY 277 + GY F +L + + ++ Sbjct: 390 ---SFEFISPACLEVTGYSREELFAQPSLMEEMIHPGDREMFDRMAAESGEEINCNNEEL 446 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLL 334 + + ++ + L + L + L D LT L Sbjct: 447 EYRIITKGGNTRWVRHTCRPIVDENGVFLGRRGCRSDITEHKQLADQVSHMVLHDLLTGL 506 Query: 335 PNFRALEQAP----EQEAGK-----SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 PN Q ID + ++ G + + L Sbjct: 507 PNRSLFADRLFLATAQRERGDHDLTVVLFFGIDRFKLINDTLGHETGDRLLIMVAERLRK 566 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWG 442 L+ N+ L + G +L G E+ M + + + + + + Sbjct: 567 LLHPNDTLCRFGGDVFAFILPGRESRHEAVTMSYRVLASLADPFNPSGQQVTLSGSIGIA 626 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + L + + ++ Q + + L N++ L G Sbjct: 627 ISPQDGTDAETLQKNAETAMYDAKRSGKN-SFRFYAREMNAQAAEMLRLDNSMPQGLVNG 685 Query: 503 DLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 D L+ QP N E + +L + G++ PD+F+PL + + VL + Sbjct: 686 DFYLHYQPQLNLEDNSVVAVEALLRWRHPELGMIPPDRFIPLAEESGFIIKLGEWVLRTA 745 Query: 560 LKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 A D R +VN+ + + + +SP+ + LE+TE S Sbjct: 746 CAQCAAWQQDGPAPLRIAVNVSGCQFNEPDFVDMVSTALSSSGLSPEYLELELTESLLIS 805 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N + ++ ++ L G +AIDDFGTGY++ LK D +KID F+ DI+T+ DA Sbjct: 806 NEQQALQKLQLLKSMGIYLAIDDFGTGYSSLAYLKHFPLDRLKIDKSFINDILTDPDDAA 865 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +I + + L V+AE VET++Q L G +QGY + +P D Sbjct: 866 ITEAIIAMGHSLKLKVIAEGVETREQLLFLEDRGCDEMQGYYLSKPLSEHD 916 >UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIT7_9PROT Length = 794 Score = 597 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 90/447 (20%), Positives = 178/447 (39%), Gaps = 17/447 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 V + + + A D LT L N L+ ++ Sbjct: 337 AGGMVRITAVSMDITNDIKNKKTIEKLAYYDSLTGLANRTLLKDRMHKAIQYAKREQTNL 396 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D+ + ++ G + + I L ++E++ L +L G E +++L ++ Sbjct: 397 AVMFLDLDHFKLINDTLGHSVGDDMLIHIAEILKIHIRESDTLSRLGGDEFVILLPSVKS 456 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 Q++ + + + + L + + + + + L+ ++ Sbjct: 457 IFDAQNIASKIQHTLQSKHDIGDHQLYITSSIGVSLYPDHGDNSEELIRNADTAMYEAKN 516 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD-LLLYAQPIRNKE---GEGYDEIL 523 + + +Q+ L + A+ + ++ Q + E G + + Sbjct: 517 SGRN-NYRIYSQSMGNYVDQQLHLEQDLIQAVKHKAGIEVFYQAKIDSENNFISGAEALA 575 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPL 582 G++ PD+F+ + L ++E + L G + ++NL Sbjct: 576 RWRHPTNGLIFPDQFIHIAESTGLMIELGNIIIEESIFQLQEWNKLGLVGLKIAINLSAR 635 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 N+ I + Y +SP V EITE + +N +++ + +L G IAIDDF Sbjct: 636 QFQDPNLVSFISSMLHNYQVSPSQVEFEITETLSMTNMTNTLRILTELKAIGVSIAIDDF 695 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTG+++ LK+ + +KID FV DI+ + D IV++I +A + + VAE VET Sbjct: 696 GTGHSSLAYLKKFPINTLKIDRSFVLDIIEDDDDKTIVQTIVSMAHSLGFNTVAEGVETL 755 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 + ALL +G LQGY +P P + Sbjct: 756 EHVALLKTMGCDQLQGYYFSKPIPKDE 782 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 597 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 83/457 (18%), Positives = 169/457 (36%), Gaps = 16/457 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 E+S + V + + + L D LT LPN LE E Sbjct: 675 EWSSINAVKDASGRVVNYFAVFSDLLQKKAL-AELDHLKHYDALTDLPNRALLEDRIESS 733 Query: 348 AGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D+ ++ + + + L+ + +L Sbjct: 734 ITHARQYERFIGVIFLNLDHFHTVNDMLSHAGGDQVLIATAKRLMDAAPAQASISRLSAD 793 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 ++ L T + ++ + + + + + + + L+ Sbjct: 794 TFVIALPDLNTSEEINRTAELIAQKIYQPLTVADQSVQLSARMGISVYPIDGNDATTLMK 853 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 + + ++ K + + +R A+ Q L+L+ QP + Sbjct: 854 HADAALADAKQCGVRNSFRFYSSSMNEHAHKLLTMGAELRNAISQNRLVLHYQPQVDIIT 913 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKG 572 + G + ++ + GI++P +F+ + + L V+ + + Sbjct: 914 GQIIGAEALIRINHPERGIISPGEFISVAEETGLIIPMGTWVIREACRQMQQWHLDKNIE 973 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 ++NL PL L Q ++ + ++ + + LE TE N ++ + + Sbjct: 974 LTIAINLSPLQLHQSDLPEIVSLALHDSGLNARYLELEFTESAIMKNVRETVAIMNKFKA 1033 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++IDDFGTGY++ LK+ D +KID FV +I + DA IV++I L + + Sbjct: 1034 MGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQSFVSNITQDPNDAAIVQAIIALGRTLGM 1093 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +AE VET+ Q L + + +QGYL P P + Sbjct: 1094 TTIAEGVETEAQLGYLRSVNCKEMQGYLYSAPLPAEE 1130 >UniRef50_Q5ZVT3 Inner membrane protein PLUS sensory box protein LssE n=6 Tax=Legionella pneumophila RepID=Q5ZVT3_LEGPH Length = 792 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 140/741 (18%), Positives = 252/741 (34%), Gaps = 56/741 (7%) Query: 37 IHSSYIFLAWMPLCV-------MLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVM 89 I + + +P+ + +L I IF + M F + Sbjct: 39 ISGEALTVTILPIALWSVTNHELLIIWMIF-TYVFSDLYKSMLLFYYNKQPTLFSTEKWL 97 Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 VV A + T ++ G+ S + F Sbjct: 98 FLFNLGVVSSGLAWG-FASSIMIPASSTLHQIFVVFLITGVTAAANSLYSPVRLSYFLFL 156 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF--YYLTRM----------IVSPHFAQ 197 F + V LL + + MLF YY R+ I + + + Sbjct: 157 VTAFVPFTIWLFSKGQVYLLLGFCGIIYLGIMLFISYYSNRILINTLKMRFKISNLNSTK 216 Query: 198 ILWRRDIAPSLGKEKRAFTL----SWLAALSVLLLLLCTPY---ENDFIAGYLVPVFFII 250 + + +A + ++ L A +L++ L F+ + + FI Sbjct: 217 DILEKKVADRTKELEKILALTKSTLESTADGILVVDLKGNIEFCNQQFLKMWGIAPGFID 276 Query: 251 FTLGVGKLRYPFLNL------TWAVSTLCLLNYNQNFLQ---GVETEYSLAFILAVLISF 301 ++Y L + L ++F + + L + Sbjct: 277 SHNDTETIQYVLNQLKNPEEFLKQIKELYNNPKQESFDELHFKDGKIFERYSQPHWLDNK 336 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 + ++ R R QA D LT LPN AL + S Sbjct: 337 IIGRVWSFRDETLR----TRLAYQANHDSLTGLPNRTALYDRLDHAINYCKRLNTSLSVL 392 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L IDN + ++ G + R L ++ ++ + + G E +L+L E + Sbjct: 393 FLDIDNFKLINDSLGHDAGDILLYEFSRRLKGCIRHSDTVARFGGDEFVLLLMTTEPKDV 452 Query: 414 LQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + NIL + + I + + F + LL + Sbjct: 453 ILIAQNILKAVAQPIKLPTQEVIVTTSIGISLFPKDGIDASTLLKNSDTAMYLAKKEGRN 512 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ Q+ K++ + I A+ + + QPI N E G + ++ Sbjct: 513 -NFQFYNNSINQQSLKRLEIQTQIHNAIKNNEFFILYQPIYNLRSGELVGAEALIRWGHP 571 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQK 587 G+++PD+F+P+ + L + VL + T SVN+ L Sbjct: 572 AIGLLSPDEFIPIAEETGLINQVGEWVLRNACVQNKTWQLMGLPHISISVNVSWRQLKNS 631 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N + K + PQ + +E TE + + ++ + G ++AIDDFGTGY+ Sbjct: 632 NFIEIAESVLKESRLDPQYLEIEFTESTMIQKSTPIDSTLIKISQLGIKMAIDDFGTGYS 691 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 N LK D +KID F+++ TN DA IV +I +A + L V+AE V+T + Sbjct: 692 NLSYLKTFPFDKLKIDRSFIQNCTTNPNDASIVEAIIAMAHSLELKVLAEGVDTIDKAFF 751 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 +H+ G +QG+L G P Sbjct: 752 MHQHGCDEVQGFLYGLPVKAD 772 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 103/458 (22%), Positives = 187/458 (40%), Gaps = 18/458 (3%) Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 +G + L I + + + + S+ + A D LT LPN +Q Sbjct: 346 RGEKRYVHLTLIPTFINKEVTGVHCIAKDITESKQSEEKISFLAYHDTLTTLPNQYKFQQ 405 Query: 343 AP-----EQE---AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 S + +D +F++ + G + + + + L+ E+ KLY Sbjct: 406 DLNTLIARSSIKPKPFSIFTIDLDRFKFINDYLGYDLGNELLTKVGTRISELLSEDAKLY 465 Query: 395 QLPGSELLLVLSGPETEGRLQ---HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E ++ E LQ + + + S + + + + L Sbjct: 466 RYGGDEFTIIHLDATPEESLQLGNKIASAI-SMAFDISGFDAFITVSIGISHHPDHGKDL 524 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ + + E ++ +TK + L + + AL++ + LL+ QP Sbjct: 525 NTLIKKSDNAMYFAKKMGRNNV-QMFNEEINTLSTKNLKLESLLYKALERDEFLLHYQPQ 583 Query: 512 RNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + ++ + G+++P F+PL + L V+ + Sbjct: 584 YDAKTNRISGVEALIRWDNEELGMISPADFIPLAEETGLIVPIGEWVMRTACHQNKAWQD 643 Query: 569 DK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + SVNL Q ++ I ++ + ++P+ + LEITE A A+S++ + Sbjct: 644 EGLPPMVMSVNLSIRQFYQPDLPQVIGKILEESGMAPELLELEITESMAMH-ADSAISIL 702 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +QL + G RIAIDDFGTG+++ LK+ D +KID FV DI + + IV++I LA Sbjct: 703 KQLKQLGVRIAIDDFGTGFSSLNHLKKFPLDHLKIDRSFVDDICLGSEEQDIVKTIIMLA 762 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +L VVAE VE QQ L QG+ +P Sbjct: 763 HNLNLRVVAEGVENDLQQQFLKDHRCDVFQGFHFSKPV 800 >UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 Tax=Comamonas testosteroni RepID=D0IZ49_COMTE Length = 1115 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 104/493 (21%), Positives = 196/493 (39%), Gaps = 27/493 (5%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 ++ + L S + +A + + L +++ + Sbjct: 605 VQAQWDELATEASACTVSAQTLMLSGVDGLRRPVAVSAVL---QAEGCLMVLQDQSQRMA 661 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGL 369 + A D LT LPN R L +Q + L IDN + + YGL Sbjct: 662 AEQEVRRLAFYDALTGLPNRRLLADRLQQALAVAQRKAHFGGVVLLDIDNFKAFNETYGL 721 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR----- 424 ++S+ + + L+ + + G + +L++ ++ L + Sbjct: 722 DQGDLLLQSMSQRIRGLLPSGATIARQGGDDFVLLIEDLGSDSVAA--AARLEQQADQWL 779 Query: 425 -----QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 I + F + T + + + Q+ + ++ + Sbjct: 780 SRLREPIEIGGIPRSITVSMGLSLFGEPELTGEEVQRRAEMAMYQAKSQGRNVS-CFFDP 838 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-KEGEGYDEILARLKYDGGIMTPDKF 538 + ++ L +R L G+ L+ QP + G + +L + G + P F Sbjct: 839 QLQSALQERRTLEQDMRAGLQAGEFELFYQPQVEMGKVIGAEGLLRWKHPEKGFVPPAHF 898 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRL 596 +PL + + VL++ + LA + SVN+ P Q ++++ Sbjct: 899 IPLAEETGVILPLGDWVLQAACQQLAKWAKHPRYAQLVLSVNVSPKQFHQSGFVEQVLKA 958 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + + LE+TE S+ + ++ + +L +G ++DDFGTGY++ LKRL Sbjct: 959 LAEHGADARRLKLELTEGMLVSDVDDTIAKMMRLKSYGIGFSLDDFGTGYSSLSYLKRLP 1018 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV+D++T+ DA I R+I LAK+ SL V+AE VETQ Q L + Sbjct: 1019 LDQLKIDRSFVRDVLTDPNDAAIARTIVALAKSLSLHVIAEGVETQAQCRFLEGIRCYAW 1078 Query: 717 QGYLIGRPQPLAD 729 QGYL+ P P+++ Sbjct: 1079 QGYLMSPPVPVSE 1091 >UniRef50_D1REK0 Putative response regulator, PAS/GGDEF/EAL domain-containing protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1REK0_LEGLO Length = 752 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 89/441 (20%), Positives = 170/441 (38%), Gaps = 19/441 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 ++ + L + QA D LT LPN L + + + + Sbjct: 304 VWSFQDISERISLTAKLEFQATHDALTELPNRILLFDRIHHAITHAQRINSLFAVIFIDL 363 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL--SGPETEGRLQ 415 D + ++ + ++ I L +M+E + + +L G E + +L + + Sbjct: 364 DRFKLINDSFSHAAGDSLLKEISSRLKKIMREEDTIARLSGDEFIFILLSESLKKPEDIM 423 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + + I + + + + + + L+ + A Sbjct: 424 AICDKILAAITKAITISKREILITASMGISIYPQDGSNVDELIRNADLAMYNAKALGGNQ 483 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYD 529 ++ Q+ +++ + +R AL +L L QP + + + ++ Sbjct: 484 -YQFYSAKLNQQSLERLDKESALRKALLSNELYLEYQPQYDVKTEQLIAVEALIRWKHPK 542 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKN 588 GI+ P F+PL + L VL + +VN+ +Q + Sbjct: 543 KGILLPMDFIPLAEETGLIVPIGEWVLRTACIQNKAWQDKGFPPFSVAVNVATKQFMQPD 602 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + R+ + P+ + +E+TE N + +I++L G RI +DDFGTG + Sbjct: 603 FVQMVKRVLNESGLLPEYLEIEVTENILIRNIAVT-ESIKELKNLGIRIVLDDFGTGNSC 661 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+ L D +KID F+ DI N DA++V++I LA + S VVAE VE Q L Sbjct: 662 LSYLRALPIDQLKIDQSFIHDIEENNSDALVVKAIISLANSLSFDVVAEGVENLLQVDFL 721 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 LQGY +P + Sbjct: 722 KNQHCDKLQGYYFSQPVSAEE 742 >UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAW8_ALHEH Length = 1051 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 92/465 (19%), Positives = 177/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + L L+V+ + + ++ A DP+T LPN Sbjct: 571 RKGGENAPLWLTLSVVRDEAGRITHYIAVGLDLTETKDREAHIRYLAQHDPVTGLPNRGL 630 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L +Q + L +D + ++ G + ++++ + L + Sbjct: 631 LADRLGQALRRAQDQHYRLALLSLDLDRFKIINETLGHVAGDEVLQTVAQRLQDHVNGAG 690 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ + L++L L + + + L + + Sbjct: 691 TVSRIGSDQFLILLPEIHKPTEAAQAAERLMACVAEPLDLSGQELTPSSVVGIALYPEDG 750 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ L + ++ + +++ L + +R ALD+G+ L+ Sbjct: 751 DNLETLHSHADAAMSMAKQASGHEGYRFFSSDMTSRARERLSLESRLRRALDRGEFRLHY 810 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L D G ++P +F+P+ + L VL + Sbjct: 811 QPQVSLADGTLTGMEALLRWHAGDEGDISPARFIPIAEETGLIVPLGRWVLGEACRQNRA 870 Query: 566 HPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 SVNL + L + ++ + R + + + LE+TE S + ++ Sbjct: 871 WRQAGLPALPVSVNLSVVQLRRSDVVADVRRALETSGLPGDGLHLEVTESLFLSEDDPAV 930 Query: 625 YN-IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + L + G +AIDDFGTGY+N LKRL +KID FV+ I + D I ++I Sbjct: 931 VTGFQTLREMGISLAIDDFGTGYSNLGYLKRLPIAKLKIDQSFVRGIGDSGHDTAINQAI 990 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A++ L V+AE VET + +L LG +QG+ RP Sbjct: 991 ISIARSLGLGVIAEGVETAAELRVLQALGCDEIQGFYYSRPLDAE 1035 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 99/459 (21%), Positives = 174/459 (37%), Gaps = 18/459 (3%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 E + + + R+ A DPLT LPN R L+ Sbjct: 366 LELLTITAITNDDGDTTHYAGLFTDITHIRENERQIRQLAYYDPLTRLPNRRLLDDRLSL 425 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + +D+ + ++ G + + + L ++E++ L +L G Sbjct: 426 AIKHAHRHRQRLAVMFIDLDHFKQVNDTLGHAVGDELLLRVSERLREHLREDDTLARLGG 485 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E L +L + + L S+ + +G + + E+ L+ Sbjct: 486 DEFLALLPDLQEVDEAIRVTQRLIEAISQPYTIGDHDFRVGCSIGLSLYPDDGESPDALI 545 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD-LLLYAQPIRNK 514 +S + + Q+ L +R + G+ L ++ QPI + Sbjct: 546 RNADGAMYRSKTEGRN-TYRLYAPEMDTRAKNQLALETALRDTAETGEGLSIHYQPIFDW 604 Query: 515 EGEG---YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK- 570 + +L G + P +F+PL + L V+ + L Sbjct: 605 RTGALHSAEALLRWHHPTRGAVAPGEFIPLAERSGLIIPLGQAVMRMVCTQLKRWQAAGL 664 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + ++NL Q + G I ++ +R ++P + E+TE + E + + L Sbjct: 665 RPVPVAINLSAKQFWQDELPGFIRKMLQRCDLNPGLMGFELTESTLMHDIERGLDTLAAL 724 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT-NTLDAMIVRSITDLAKA 689 G +AIDDFGTGY++ L+RL +KID FV D+ T IV ++T LA+ Sbjct: 725 RGMGCSVAIDDFGTGYSSLTYLQRLPVTTLKIDRSFVSDLGTCRKGGCAIVAAVTGLARE 784 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE VET+ Q L + V +QG+ GRP P Sbjct: 785 LELQVVAEGVETEAQLRALDRYQVALVQGFKTGRPVPAD 823 >UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GHW2_ANOFW Length = 765 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 126/687 (18%), Positives = 263/687 (38%), Gaps = 45/687 (6%) Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAI-LRWQLGTRWRYGLTSRYVWQRLF---W 127 + F + +L S +++ I + ++ W+ L + V + W Sbjct: 80 WMFQTELFFPNLADVFYLLYSFAYIIALLYVIMQQRKVVVVWQSLLDATIVMCVILAYSW 139 Query: 128 LGLVTPIG-IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 + +V P+ ++ S+ + +PL +F ++ ++ ++ LF Sbjct: 140 IYIVGPMIRLEESILYISVLVAYPLLDLVMLFLLLHLFFATNVRRIWLWNMVGVGLF--- 196 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG----- 241 F ++ + + W+ LS+L++ L Y D Sbjct: 197 -------VFTDTVYFIQMMQFHYESNSWLDPLWI--LSLLMIGLSGYYAKDGHLTFQKSE 247 Query: 242 --YLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 ++ + F L YP + + Q + + + + Sbjct: 248 QPSVIKIMFPYVCFLLLLFVPFIYPDDRIVITCLVFAVGCIFLR--QWMMLKENRQLLQQ 305 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEA 348 + + + LN + A D LT L N RA +A +Q+ Sbjct: 306 LQTLNDNLERKVAQRTSELVHLNEQLTYVANHDFLTGLFNRRAFVMKLEEELIRAKQQQH 365 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ ++G + I I R L ++ + + + G E ++ + Sbjct: 366 HFAVIFIDVDRFKQINDYFGHQIGDELIVQIGRLLKETIRPTDFIARQGGDEFTIIFTPF 425 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + L+ V+ L S + + + + + + + ET++ L+ ++ Sbjct: 426 KHVDELRRFVHRLVSFSQQPVAVQHLDIRISLSVGVAVYPYDGETVETLMKHADIAMYRA 485 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + ++ ++ + A+D L+ QP + E G + + Sbjct: 486 KEQGKNQ-YQFFNGEMDRVVLQKTMIETALHEAIDNKQFTLFYQPQFDVQTGELMGVEAL 544 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMP 581 + + + G ++P F+P+ + V+E + + T + R SVN+ P Sbjct: 545 IRWVHPELGTISPAMFIPIAEETGQIIAIGKWVIEEACRQIQTWNEQHGRSLRMSVNISP 604 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L++N I + ++ + P + LEITE A N + ++ ++QL + G I+IDD Sbjct: 605 KQFLKENFVEHIRAVLQQTQLPPDQLDLEITEGVAVFNEQYTIQKLQQLKQLGVHISIDD 664 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L++ + +KI F+ I D +V++I LAK L V+AE VET Sbjct: 665 FGTGYSSLSYLRKFPINRLKIAKPFIDGITEEKEDVAVVKAIIVLAKNLKLRVIAEGVET 724 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 QQ +L L +QGY++G+P P Sbjct: 725 LQQLNILRSLQCDEIQGYVLGKPVPAD 751 >UniRef50_Q21IJ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21IJ5_SACD2 Length = 820 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 113/649 (17%), Positives = 228/649 (35%), Gaps = 43/649 (6%) Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI- 178 + GL+ + +++ + I L I Sbjct: 152 QSSAVVIAFGLIRSSLLVFFLFIAFYYLLTKPLIQIALQVKQINPGSPGEQRLSRPAGIH 211 Query: 179 ---YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL------------ 223 L +++ + A R E+ + + Sbjct: 212 DDELTQLVASTNQLLDAVDLALAKRRAVEVVLRKSEEHVRQIIDSLPVWVGARNKDGHYI 271 Query: 224 -SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + L + D + G + F F ++ + + + + + ++ Sbjct: 272 FANQALADFLHTKPDAMRGSHISDFAEFFVTDPQQIIDLDAEVIKS--RISAQIWEEKWI 329 Query: 283 QGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 E + + + + + L + + + A D LT LPN L Sbjct: 330 TNDGEERDMHTHVMPMEFYDEVVSLVVSSDITELKRTQAQMEHMAYHDALTDLPNRSYLV 389 Query: 342 QAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + E+E + + +D ++++ G ++ + + L + +EN+ + Sbjct: 390 ERLEEEVRKANHGQYYGALLFIDLDQFKYINDSLGHPAGDGVLKHVAQRLTAVTKENDLV 449 Query: 394 YQLPGSELLLVLSGPETE--------GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD 445 +L G E ++VL+ E + + S +N+ L + + Sbjct: 450 VRLGGDEFVVVLTNLGDELPTSILRAEDIGERLRRYISEPHFYNDLQLHVTCSVGIVMYP 509 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + LL Q A+ + ++ + +++ + AL+Q Sbjct: 510 EEDAGVHELLRYADTAMYQVKEQGRD-AIQFFNKYMADKARNVLVMEGDLHKALEQHRFS 568 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + + G + +L D G+++P +F+P++ L VLE ++ Sbjct: 569 LYYQPRVDVTTSQIVGAEALLRWEHPDRGMISPAEFIPILETSGLIVEVGRWVLEDSIRQ 628 Query: 563 LATHPCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + R VN+ P + ++ + I+P + +EITE N Sbjct: 629 VKIWQEQGIWKDDMRLGVNISPRQFRSSEFVNDVTKILQEVGINPSLIEMEITEGIVIHN 688 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 E ++ + L + G A+DDFGTGY++ LK+L I+K+D FV+DI + D ++ Sbjct: 689 LEETVATMSSLCELGINFALDDFGTGYSSISYLKQLPVAILKVDQSFVRDITFDRNDRVL 748 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V +I+ + L VVAE VET Q L+ + +Y QGYL P Sbjct: 749 VETISAMGNMLGLDVVAEGVETCDQLHLVREYNCKYYQGYLCSPPVNAD 797 >UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DNW4_DESVM Length = 1076 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 106/562 (18%), Positives = 195/562 (34%), Gaps = 31/562 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY--LVPVFFII 250 R E R + A + L I GY + + + Sbjct: 493 AERRTVEQALRRAEARFRGIFEHALEGIFQSTPEGRFLSVNPAMARILGYEGVQELLEGV 552 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA------VLISFSVC 304 ++G G P + N +G L ++ ++ Sbjct: 553 ESIGDGVYADPARRDEFVARMEEHGQVNAFEFRGRRKGGDLIWLSVNARRVPGADGATMY 612 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCL 355 + R QA DPLT LPN + + L Sbjct: 613 YEGFLEDVTMGHESRERLEHQAFHDPLTGLPNRVLFHDRLQMALKRAARRRNYTFAMLYL 672 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + ++ + L +++ + + + G E ++L T G Sbjct: 673 DLDRFKVINDSLGHDVGDALLKVVSAKLRECVRDVDTVARFGGDEFGVLLEETPTRGTAV 732 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + + T + L+ ++ Sbjct: 733 RVARRIRAHLAEPVRIGPHEVFTTASIGIVLRTDQYSTPEELVRDADTAMYRAKEQGQSR 792 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + + + + + + +R A+++ ++ L+ QP+ + G + +L + + Sbjct: 793 -FKVFNKRMREEALRLLTIETDLRRAVERQEMRLHYQPVVALEDGGLHGVEALLRWTRTE 851 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR--FSVNLMPLTLLQK 587 GG ++P +F+P+ L LE + L P VN+ +Q Sbjct: 852 GGDISPAEFVPVAEDTGLITSIGAFALEEVCLQLRRWNEAGLPPPGVVHVNISGRQFMQP 911 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + L +R P+++ E+TE + ++ + QL G R+ +DDFGTGY+ Sbjct: 912 GLPHAVEMLLERTGTDPRSLRFEVTESVLMRHGSQAITVMAQLRDLGIRLCLDDFGTGYS 971 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL D IKID FV + + IVRSI L L +VAE VET Q + Sbjct: 972 SLGYLKRLPVDSIKIDRSFVAGLEHDRDGQAIVRSIVSLGLHLGLEIVAEGVETPTQAEM 1031 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L LG +Y QG+L P D Sbjct: 1032 LASLGCRYAQGFLYAPPVSADD 1053 >UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BB47_9BACI Length = 1106 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 89/470 (18%), Positives = 187/470 (39%), Gaps = 17/470 (3%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTD 329 ++ + ++ L + L+ +V + + A D Sbjct: 475 NIIRQQYRIITRDGKLKWVSDHLIPIYDEKGRLIRLDGIVADITAQKQAEAQMEFLAYHD 534 Query: 330 PLTLLPNFRALEQAP------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 +T LPN R +Q + + L +D + ++ G + ++ + Sbjct: 535 YMTGLPNRRLFDQTLNGLFEGKNPEKFAIMYLDLDRFKHINDTLGHPIGDQVLKEAADRI 594 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 +++ + ++ G E ++ E+ + + + L + Sbjct: 595 TASIRKGDFASRMGGDEFAIIARNVESIEDASRLAAKITGTIQKPYEIEGYELFITASIG 654 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + N T + L + + ++ ++ K+ L +R AL Sbjct: 655 ISLYPNNGSTPEELARNADAALYHAKQMGK-SSHQVYNASMNIESFKKYCLERDMRNALK 713 Query: 501 QGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + QP + G + +L D GI++P +F+P+ + L V+E Sbjct: 714 DDQFYVEFQPKIEPRTHKLAGAEALLRWNHPDWGIVSPMEFIPVAEESGLIVEIGDWVIE 773 Query: 558 SLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 +++ + S+N+ + N+A I L +++ ISP+ + LE+TE Sbjct: 774 NVIAKMEEWQKGGLSLVPISINVSGQRFYKNNLAEMIGDLCQKHGISPKLLELELTESSL 833 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 ++ + +E+L + ++++DDFGTG+++ L++ + + +KID F K+I++N D Sbjct: 834 IHYSDQVLQELEKLGQLKIKLSLDDFGTGFSSLTHLRKFRFNTLKIDKSFTKNIISNLED 893 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 A I S+ D+A ++ VVAE VE +Q L K G +QG+L RP Sbjct: 894 ATITSSLIDMAHGLNMKVVAEGVEEFEQLDFLKKKGCDEIQGFLFSRPVS 943 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 105/465 (22%), Positives = 178/465 (38%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + ++ + + + + R + ++H A DPLT LPN Sbjct: 829 RRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLL 888 Query: 340 L--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L E+A + L +D + ++ G +R++ L + + Sbjct: 889 LRSRLDHAIERARRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTG 948 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW-NNTGLDMGYGAAWGRFDGN 447 L +L G E + V+ + + + + R + +G F + Sbjct: 949 TLARLGGDEFVAVIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPED 1008 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL Q ++ + + ++ L +R AL+QGD LL+ Sbjct: 1009 GDNPDTLLQHADTALGQVKGAGGGAY-GFYTRTLTERISARLGLEAGLRHALEQGDFLLH 1067 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ E EG + ++ DG ++ PD+F+PL L VL + + Sbjct: 1068 YQPLIALGTGEVEGVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQ 1127 Query: 565 THPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VNL P I + R+ ++ + + LEITE ++ Sbjct: 1128 RWRSQGMPLTVLAVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAA 1187 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + L G R+AIDDFGTGY++ L+R D IKID FV+DI + I +I Sbjct: 1188 EAQMTGLKHLGVRLAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATI 1247 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + L V+AE VET Q L + QGYL RP A Sbjct: 1248 IAMGRTLKLHVLAEGVETTDQLDFLSRKQCDSAQGYLFSRPITAA 1292 >UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T198_ACIDE Length = 948 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 117/695 (16%), Positives = 232/695 (33%), Gaps = 35/695 (5%) Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 ++F +R ++ L S + F + + LR Sbjct: 247 YLFLYRSIIQGTIEAPYRALARSEKSLKAVLDAVPDLMFEMTRSGRYLRVHTRVPGLTER 306 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL-LSLFTA 175 + R L L + + F + +L ++ Sbjct: 307 VPEQIAGRTIDEVLPPDAAGVVRTALTQAEATGHTQGQQFALEMTDGRHWFELSVARIQD 366 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRR-----DIAPSLGKEKRAFTLSWLAALSVLLLLL 230 + F L+R + R+ + P S + Sbjct: 367 PGFADPRFVVLSRDVTQRMQDLDALRKLRHAVEQTPHSIIITNLRGQIEYVNPSFTTVTG 426 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 E ++ + L W L E Sbjct: 427 YGSDEVMGRNPRMLGAGKTSAEVVAQMWERLLSGLAWKGELLNR--------HKTGREVW 478 Query: 291 LAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA---- 343 ++ + + + + R A D LT LPN Sbjct: 479 EYVSISPMRDEQGAITHYISVQEDISERKSNEERIRHLANFDALTGLPNRAMFSARFSQA 538 Query: 344 ----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 E + L +D + ++ G + + + L L+++ + + + G Sbjct: 539 LGLSQRSEGSLALLYLDLDRFKNVNDSLGYAVGDGVLIDVAHRLKALLRDEDTVSRYGGD 598 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L+VL T H L S+ + L + + + G+ ++ L Sbjct: 599 EFLVVLP-LTTAQGAVHFAERLHGELSKACQVESHALLVTFSVGIAMYPGDGSDMEALTH 657 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RN 513 ++ + Q+++ + + N +RTA+ QG++ L+ QP + Sbjct: 658 HAEVAMYKAKEMGRDH-YCFFSADMQAQSSRLLRIENGLRTAIAQGEMSLHFQPQWRVHD 716 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 + G + +L + G++ P +F+P+ L VL++ L L Sbjct: 717 RRMVGVEALLRWTHPELGVVGPAEFIPVAESSGQIIDIGLWVLDTALACLRRWRDAGHTD 776 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VNL ++ + + +R + + + LE+TE A E ++ + L Sbjct: 777 LTVAVNLSLAQFRHPDLVEVVQKALQRAGVPAEVLELELTESIAMHEPEKAIACVRALAD 836 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++++DDFGTGY+++ L+RL+ +KID FV+++ T IVR+I +++++ L Sbjct: 837 LGVQLSLDDFGTGYSSFSYLQRLRVHRLKIDQSFVRNLDTARG-MSIVRAIVEMSRSLGL 895 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + +AE VET Q L L +QGY + RP P+ Sbjct: 896 ATIAEGVETPHQLEALAGLSCDMVQGYHLSRPLPV 930 >UniRef50_A4BJS0 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BJS0_9GAMM Length = 857 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 105/523 (20%), Positives = 191/523 (36%), Gaps = 24/523 (4%) Query: 225 VLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 L ++ + +F + L + + L + G Sbjct: 320 AFLKSYRLSPDDYLKPEHYNVIFDSLSPATRQLLEEADQEAVESNQAVLLPEISWRLPDG 379 Query: 285 VETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + +L + + A D LT LPN Sbjct: 380 HHLSLEMRKLSIQYKGQP-AILSVGVDITERKLHQEHIQHLAYHDALTDLPNRHLFLDRL 438 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + + +DN + ++ G + + + L +E + + +L Sbjct: 439 DQALLRTQRSKQYGALIFVDLDNFKTINDTKGHLAGDAVLADVAERLKHAFREVDTVARL 498 Query: 397 PGSELLLVLSGP-ETEGRLQHMVNI-------LNSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 G E ++ ++ TE + + R L + F + Sbjct: 499 GGDEFVICMTDLGRTEQEAYDIAHDRSVKLMDAMKRPFQTQGDQLIVSASLGLAFFHDHS 558 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T LL ++ + +E ++ + + + L R AL + + L Sbjct: 559 LTASELLSHADMAMYRAKETGKNRII-LFQEEMAEASERLLELKEDSRNALRRDEFHLVF 617 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L G+++P +F+PL+ + +V+E LA Sbjct: 618 QPQVDARDRKILGAEALLRWTHPSRGMVSPGEFIPLLEDGEMMPLVGQKVIELAAAQLAD 677 Query: 566 HPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + R S+N+ P Q + + + + + + LEITE N + Sbjct: 678 WRKEGLIREDFRLSLNVSPQQFRQADFVSTVRTVLDEHDLPAYLIDLEITEGMIIDNIDH 737 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ +++L + G +IDDFGTGY+N LKRL D++K+D FV+DI + D IVR+ Sbjct: 738 TVAAMKELREMGIHFSIDDFGTGYSNLNYLKRLPLDVLKVDQSFVRDIEHDANDTAIVRT 797 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I +A L+ VAE VET+ Q LL +LG Q QGYL P Sbjct: 798 IIAMADQLKLNTVAEGVETEDQLTLLRELGCQVFQGYLYSPPL 840 >UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJT7_CYAP7 Length = 812 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 96/464 (20%), Positives = 192/464 (41%), Gaps = 23/464 (4%) Query: 283 QGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 Y +A + ++ + + + + +R + L D LT LPN Sbjct: 337 SKTGQFYWVATTIVPFLNQNNQPFQYFAIRFDITQRKLAEKRLRHEVLHDSLTGLPNRTL 396 Query: 340 LEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L Q EQ + + +D + ++ + G + + +I L ++ Sbjct: 397 LIQRLEQVRHRAKRKANYCFALLFIDLDRFKNINDNLGHPIGDRVLITIASRLQECVRSL 456 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E +++L E E + ++ + + + L + F+ Sbjct: 457 DTVARLGGDEFIILLDELEEEKEIFKIIERIEKQLTTPMVIEGQTLSLTASIGIA-FNDT 515 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL + + + Q L N ++ A+++ + LLY Sbjct: 516 NLSNSDLLRNADLAMYRVKNEGKA-GYAIYQSEMYAQAQALWELENHLKLAIERQEFLLY 574 Query: 508 AQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + + G++ ++ G+++P F+P+ + +L VL+ + L+ Sbjct: 575 YQPILSLKTLTVIGFEALIRWQHPQRGLISPVHFIPVAEETDLIVAIGEWVLQQSCQQLS 634 Query: 565 THPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 +VNL L + N ++ + ++ + + LEITE +N Sbjct: 635 AWREKYPQANHLTINVNLSNRQLEKDNFVYKLDNVLQQTGLPATQLKLEITETLLMTNLA 694 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 +++ + QL + I+IDDFGTGY++ L RL +KID FV ++ ++ + I++ Sbjct: 695 AAIATLSQLKQRNINISIDDFGTGYSSLNYLCRLPVSSLKIDRSFVANVHEDSKNLQIIQ 754 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +I L + + V+AE +ETQ+ L +LG QY QGYL +P Sbjct: 755 TILSLGEQLMIEVIAEGIETQKHLEQLQELGCQYGQGYLFSKPV 798 Score = 42.3 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 30/245 (12%), Positives = 67/245 (27%), Gaps = 17/245 (6%) Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL-----FWLGLVTP--IGIKCSMYL 142 + + ++C L + W G + + + W G + P + S YL Sbjct: 10 IPPYSLAIICPLLALGVRYLLNWALGNNAPLLIFIIPVIITAWYGGLLPGILSTVISAYL 69 Query: 143 VGSFFDFP---LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 FF P KI + I + + + L Y L ++++ S ++ Sbjct: 70 GNYFFIHPTEQFKILSLPETVRIIIFLSEGIFLSIFFEYYKRLNTKTSQIVESLRESEER 129 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 +R + L Y++ I G +FF Sbjct: 130 YRLLVEGIEDYGIFMLDGQGRIISWNLGAERIQGYQSTEIIGRHYSIFFTTTDTSAKVPE 189 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSE 316 + + + + +L+ + + + L + R + Sbjct: 190 KILQTALKQGRFKGEGWRR----RKDGSLFWASIVLSPVFAQNRQLKGFAKITRDISERK 245 Query: 317 WLNRR 321 + Sbjct: 246 QAEVQ 250 >UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0VL09_ALCBS Length = 959 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 116/569 (20%), Positives = 214/569 (37%), Gaps = 32/569 (5%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAG 241 RMI + + L T+ A + +L L + I G Sbjct: 381 IRMIGTRRDITEDRQAQEQQRLAA-----TVFENAPEGIFILDHKFRFLAVNTRFEQITG 435 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + I+ G R +L +T A+ N + Y ++ + Sbjct: 436 YTESLLIGRRILEEEGAQANREIYLEITAALLDNGFWEGEINERRRNGEIYPEWLQMSAV 495 Query: 299 IS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + + M+ + ++ + D LT L N + Sbjct: 496 RDEQKRVIRYVGMMSDLTARKETEQQLQFLSNYDRLTGLANRTQFREHLHKSLTLARLNR 555 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +D + ++ G + +++ + E L ++ G E L+L Sbjct: 556 QKVALLMIDLDRFKPINESLGHEIGDRLLKAAAERMAQHAGGQESLARVGGDEFTLLLEN 615 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 +EG + L + + L +G F + Q ++ Q Q Sbjct: 616 HGSEGSISQQCQQLINAMKKPFLIDGHELLLGASIGISIFPDTAKEAQSMINQSDMAVYQ 675 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDE 521 + + + +Q+ L ++R A+ + + +++ QP N + Sbjct: 676 AKRSGGN-NFQFYRSNMRVASVEQLALETSLRKAIFKNEFVVHYQPKMNLASNRITSVEA 734 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLM 580 ++ G++ P F+PL + L + VLE + G SVNL Sbjct: 735 LVRWQHPTMGLLPPADFIPLAEETGLISAIGELVLERSCRQAHKWQKQGLGEICVSVNLS 794 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + N+A I R+ +SP + LE+TE + E ++ ++QL G +A+D Sbjct: 795 AHQFRKGNVAETIDRVLSTTELSPHLLELELTESLIMEDMEQNIELLQQLRSRGVELALD 854 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR D +KID F+ ++ N DA I R+I D+A + ++V+AE VE Sbjct: 855 DFGTGYSSLSYLKRFPVDTLKIDRSFIMELDKNPDDAAITRAIIDMAHSLKMNVIAEGVE 914 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T ++L + +QGYLI RP P ++ Sbjct: 915 TADHLSILRDMHCDSIQGYLISRPVPESE 943 >UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZMU9_PSEU2 Length = 972 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 95/433 (21%), Positives = 177/433 (40%), Gaps = 19/433 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSR 365 ++ A D LT LPN L + S + +D + ++ Sbjct: 521 ERYDAKKKLTYLAENDSLTHLPNRWFLSNYLREIISRKTSAPDAVSVIFIDLDRFKAVND 580 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMVNI 420 G + + R L + EN + +L G E +V++ + H+V Sbjct: 581 TMGHSVGDQLLIQAGRRLKDCIGENSVVARLGGDEFSIVVTHSVYSESLIKSLATHVVEA 640 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 L + + + + + + +L Q+ Sbjct: 641 L-GKPFNLGGQDIFVSASVGIANYPFDGRDTGVILKNADTAMYQAKKSGRN-NFKFYNAR 698 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 ++ T+++ +R AL++ + +L+ QP + G + +L + G+++P Sbjct: 699 MNESLTRRLQTETLLRGALERDEFILHFQPKVSLTDGRISGLEALLRWNHPEQGMVSPAD 758 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRL 596 F+P++ L + V+ + + L + ++NL L K +A + + Sbjct: 759 FIPILEDTGLIIPVGVWVIRKVCETLKRWEENHIRLVPIAINLSVRQLQVKGLAETVKHI 818 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + Y I+P + E+TE + ES++ + + +G +++DDFGTGY++ LKR Sbjct: 819 VEAYGINPALLEFELTESMLMIDPESAVEILRDIKSYGISLSVDDFGTGYSSLAYLKRFP 878 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F+KDI +N DA I R++ LA L+V+AE VET Q LL G + Sbjct: 879 LDALKIDRAFIKDITSNHEDAAITRAVIVLAHELGLNVIAEGVETVDQLELLVTYGCDQM 938 Query: 717 QGYLIGRPQPLAD 729 QGYL +P + Sbjct: 939 QGYLFSKPVISDE 951 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 102/424 (24%), Positives = 186/424 (43%), Gaps = 16/424 (3%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 A DPLT LPN L + + + +D + ++ G + Sbjct: 527 EELKKMAYFDPLTGLPNRTLLRDRIESAIHFANRNGSKVAILFIDLDYFKTVNDTLGHDV 586 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 + + + L + +E + + + G E + V+ + + + S Sbjct: 587 GDRILVQVAKRLSSVFRETDTVARFGGDEFVAVIPDVRDLKDVVQVAERILSLFSTPFEA 646 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N + + + N E L+ ++ E ++ + + Sbjct: 647 NGEDIYLSASVGIAVYPDNGENPTELIKNADMAMYRAKEEGK-SNFSFFTEEMNSKAVEI 705 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + + N + AL++G+ LLY QPI + G + +L D G+++P KF+P++ + Sbjct: 706 LSVKNKLHKALERGEFLLYYQPIYSLGDNSIVGLEALLRWRDPDRGLVSPAKFMPILEEL 765 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L V+ K G SVN+ P + +N R++++ + + + Sbjct: 766 GLVKEVGRWVMGEAFKKSREWGDR-YGIYVSVNISPRQFMDRNFVKRVLQIASDTNANNE 824 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 V+LEITE N E S+ +++L GF++A+DDFGTGY++ LKRL DIIK+D Sbjct: 825 HVVLEITETSLMRNPEESVSILKRLRAKGFKVAVDDFGTGYSSLAYLKRLPIDIIKVDMT 884 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F + +V + +D IV ++ L+K+ L +AE VET++Q +L +LG QGYL G+P Sbjct: 885 FTQGMVKSNVDRSIVMAVIGLSKSLGLKSLAEGVETREQVNILRELGCDLAQGYLFGKPM 944 Query: 726 PLAD 729 + Sbjct: 945 KEEE 948 >UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F6T4_ACIAD Length = 676 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 110/467 (23%), Positives = 202/467 (43%), Gaps = 26/467 (5%) Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 Y + + L + + + + AL D LT LPN R ++ Sbjct: 210 GKLYWVDTTIVPLKDNDGLLKNYISIRTDITQLKSSEDHAKYMALYDELTGLPNRRYVKD 269 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 E + + + +DN + ++ G + ++ + + ++E E + Sbjct: 270 RLKKVIELSKESQHHSAILMMDLDNFKTVNDTLGHDYGDNLLKMVANRVKKCVRETETIA 329 Query: 395 QLPGSELLLVLSGPET---------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD 445 +L G ELL++LS + + + N + + + N + F+ Sbjct: 330 RLGGDELLIILSNLSENEEIAQAQAQAIAERISNSIY-QPFNLENQVIQTSVSIGIFVFN 388 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 LL Q+ A+ + + + ++ + LL+ +R AL + + Sbjct: 389 DASIPQNELLKYADMALYQAKANGKN-CICTFDPLMEQNVISRASLLSDLRQALIRDEFE 447 Query: 506 LYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 LY QPI ++ GY+ +L + G++ P +F+ + +L +VL + L Sbjct: 448 LYYQPIVDQHKKIIGYEALLRWIHPVRGLILPGEFIEQAEKSDLIHLIGNRVLMMACQQL 507 Query: 564 ATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 D SVN+ + + II++ + +P + LE+TE +++ + Sbjct: 508 YQWSQNTDSAHWTLSVNISVQQFRKSDFEENIIQIIQDSKANPYRLRLELTESMFYTDMQ 567 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 SS+ +++L + G R ++DDFGTGY++ LK L D +KID FVK++V N+ D IV Sbjct: 568 SSIEKMKKLIEIGVRFSMDDFGTGYSSLNYLKLLPLDQLKIDRSFVKNMVDNSRDIAIVN 627 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I +LA L+VVAE VET++Q L + QGYL GRP P+ Sbjct: 628 TIINLAHILDLNVVAEGVETEEQFICLTQNQCFTFQGYLFGRPLPID 674 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 84/432 (19%), Positives = 168/432 (38%), Gaps = 18/432 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + N A D LT LPN A + +D + Sbjct: 168 ITQRKQAN--LFYLAHFDQLTKLPNRVLFMDRLAMTLAEASRTNAQVGLLFIDLDKFKHF 225 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + ++ L +E + + +L G E +++ + L + + Sbjct: 226 NDSMGHAFGDQLLIALAGILARCSREMDTVARLSGDEFTIIVDSISGQKDLDILCWRILD 285 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + E L+ + ++ + Sbjct: 286 ALKLPQQIMGREIFISASIGTAIYPLDDEDANNLMIKADAAMYEAKRNGRN-TYRHYAAG 344 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + + ++ L +R A+++ + LY QP + + G + ++ G++TP Sbjct: 345 MQLYSLDRMSLETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWHHPQRGLLTPIH 404 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+ + + L V+ + + + R SVN+ + Q + + + Sbjct: 405 FIEIAEETGLIVAIGQWVISEACRQHQAWLQEGFQPMRISVNISAMQFYQSDFCDMVEHI 464 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 K I+P + E+TE +A++ + + QL + G ++AIDDFGTGY+N L++ Sbjct: 465 LKETRINPAYLEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTGYSNLSYLRKFP 524 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +K+D F+K I ++ IV++I LA++ SL +VAE VET + G ++ Sbjct: 525 IDRLKVDQSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVELHWAESSGCTFV 584 Query: 717 QGYLIGRPQPLA 728 QGY +P P Sbjct: 585 QGYRFSQPLPAE 596 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 118/530 (22%), Positives = 208/530 (39%), Gaps = 32/530 (6%) Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR-YPFLNLTWAV 269 E R S + ++ + ND + LG+ L +P + + Sbjct: 34 ETRLLIGSEVDSIRECVQQNRVVVRNDLAGDPGDDDPADLAKLGIRALAVFPLTSNNHSP 93 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 LL ++F E E L +A ISF++ L ++ D Sbjct: 94 EVALLLCGRESFFF-DEPELKLLLEVAGDISFAMANLD----------KSQELAYLTHFD 142 Query: 330 PLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 +T LPN L +Q ++ + ID + ++ +G +R + Sbjct: 143 KVTDLPNRLLLTDRLQQAMFQADSYQGIVSILYMDIDRFKQVNDSFGHAGGDEVLRRVAE 202 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGP---ETEGRLQHMVNILNSRQIHWNNTGLDMGYG 438 + + + + + + G E +++L G + G + L+S + + L + Sbjct: 203 RIGACVGKADTVSRWGGDEFIVLLPGQSAGDAAGVASAISRALHSLIVLGGSRELFVSCS 262 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + L+ + L ++R A Sbjct: 263 IGIAEYPHKGGDIDALINSARSAMSAIKEQGGN-NYRHFVAGGDQAFDDGLELETSLRQA 321 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L Q LY QP + G + +L G++ PD+F+PL + L V Sbjct: 322 LGQKQFRLYYQPQIDIVSGRVLGLEALLRWHHPTQGMIAPDRFIPLAEKTGLIIPIGEWV 381 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 L +AT + G + +VNL QK++ I R+ + P + LEITE Sbjct: 382 LREACSQVAT----QHGLKVAVNLSARQFHQKDLVAMIRRILDETGMPPVNLELEITESA 437 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + E ++ +EQL+ G +++DDFGTGY++ LKR D++KID F+ ++ T+ Sbjct: 438 LIYDVELAIATMEQLNDLGVSVSLDDFGTGYSSLSYLKRFPIDMLKIDKSFIDEVTTDPD 497 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +IV++I +A + L V+AE VET+ Q +L + G QGYLI RP Sbjct: 498 SNVIVKTIIVMAHSLGLKVIAEGVETK-QLTMLREHGCDQAQGYLIARPL 546 >UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRK3_9GAMM Length = 992 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 107/615 (17%), Positives = 219/615 (35%), Gaps = 35/615 (5%) Query: 143 VGSFFDFPLKISTFFGDADAIF--TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 S P+ + ++ + TV+ V + + + + F I Sbjct: 378 FFSAESLPVAMEKVRTQSETPYQATVITRDGTAIPVTVNGKAVLWNGQKARAASFRDITR 437 Query: 201 RRDIA-PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 R + + E R LS L A +L+ Y + I + + L Sbjct: 438 RIEYQKRLMASEDRFRQLSDLVAEGLLI------YSENKIIDVNQSLCELFGQRREDLLE 491 Query: 260 YPFLNLTWAVSTLCLLNY-------NQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRI 311 L S + N+ + + T + A + + ++ +R Sbjct: 492 SDLSELFSEQSLTAINNHPDTAAALELSLERADGTLFPAEITTASMQFDDGLFIVLSIRD 551 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFM 363 R + QA D LT +PN + EQ + + +D + + Sbjct: 552 ISRYKEQEEHILYQAQFDLLTHIPNRFLAKDRAEQAIRNADKHDGKLALMFIDLDGFKKV 611 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + ++ R + +++ L + G E +++ + + + Sbjct: 612 NDSMGHEVGDQLLQQATRRFVSCIEKQHTLARHGGDEFIIIQEDIADPTDSEIVAEKILQ 671 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + N L + + + LL ++ + Sbjct: 672 QFSNPFSIENKQLIVTASIGISIYPDDANNYSDLLRAADIGMYKAKHDGRNR-FHYYTQE 730 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK-----EGEGYDEILARLKYDGGIMTP 535 ++ T+++ L N++R AL + L QP+ + +G + ++ G ++P Sbjct: 731 MNDIATRKLALDNSLREALQNREFNLVFQPLICNVKGQPKVQGAEALIRWTSPVLGQVSP 790 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 +F+P Q L VLE + D + SVN+ P ++ + Sbjct: 791 VEFIPHTEQSGLIIPIGRWVLEQACQQAKRWVDDGQEDVFISVNVSPRQFKGNDLLRDLT 850 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + P + +E+TE + ++ + G +++DDFGTGY++ LK+ Sbjct: 851 SALESSGLHPHHLNIEVTEGLLIEASPELNNTLQLITDMGINLSMDDFGTGYSSLNYLKK 910 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 + +KID F+K++ N+ A++V + +A LSV AE +ET +Q L L Sbjct: 911 FPFNNLKIDRSFIKELPDNSDSAILVTATIAMAHQLGLSVTAEGIETAEQYNYLRGLRCD 970 Query: 715 YLQGYLIGRPQPLAD 729 LQG+ +G+P P + Sbjct: 971 RLQGFYMGKPVPANE 985 >UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=8 Tax=Ralstonia RepID=B2UIB3_RALPJ Length = 916 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 92/439 (20%), Positives = 166/439 (37%), Gaps = 16/439 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLR 356 ++ + +R A D LT L N A+E A ++ + L Sbjct: 457 VMLSFADITDIKRAEQRLRHLAAHDALTGLTNRSFFIAHLESAIESARDESRELALFFLD 516 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G ++S L + + + +L G E ++++ R+ Sbjct: 517 LDRFKSVNDTAGHACGDTLLQSAAARLTDCIGPGDVIARLGGDEFVILIDQRVEGKRIAL 576 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L N +G + + + LL ++ + A Sbjct: 577 LAERLLQAMREPFDTVNGRYYLGVSIGVALYPHDGISGSDLLRSADAAMYRAKQNGRNRA 636 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 ++ + ++ +L N +R A + +L L QP + G + +L Sbjct: 637 -QFYTAELNARLQRRYMLENALRDARENNELQLVYQPKYDLASHRIVGAEALLRWNSAKL 695 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNI 589 G ++P +F+P+ + L VL + R +VNL ++ Sbjct: 696 GAISPVEFIPVAEETGLIVPIGAWVLRRACEQAVIWYEALGYDFRMAVNLSARQFQAGDV 755 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I + + P A+ +EITE A+ + L G RI+IDDFGTGY++ Sbjct: 756 VPMIEQTLADSGLPPTALEVEITESLLMGGADEVRPMFDALTAQGIRISIDDFGTGYSSL 815 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+R +KID F+ I + + +I +A+A ++V AE VE Q L Sbjct: 816 SYLQRFPISNVKIDRSFITGIPHDPDSVALTEAIVAMARALGMTVTAEGVEDADQVEFLA 875 Query: 710 KLGVQYLQGYLIGRPQPLA 728 K G Q +QGY IG+P Sbjct: 876 KAGCQEIQGYYIGKPVTAE 894 >UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5S7_9DELT Length = 857 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 91/476 (19%), Positives = 175/476 (36%), Gaps = 23/476 (4%) Query: 276 NYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 N+ + ++ + +C V + + QA DPLT Sbjct: 371 NFVSKVRRRDGRIIWISENARRITDADGSVMCYEGSVEDITLRKKAEDQLKRQAFHDPLT 430 Query: 333 LLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN + + + +D + ++ G +RS+ R L Sbjct: 431 GLPNRALFLDHLRMAMERGRRRRHLFAVIYMDLDRFKVINDSLGHETGDELLRSVARVLE 490 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAW 441 + + + + G E +++ + + + N + Sbjct: 491 KCGRSVDTIARFGGDEFAILIEEISASRDAIAIARRILDGVRQPFTINGNEVFTSASLGI 550 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + LL ++ H + + Q + + L +R A+D Sbjct: 551 VLKTDGYDRPEALLRDADTAMYRAKEHGKSR-FKVFNQKMHDQALRLMALETDLRRAVDL 609 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + + QPI + G++ ++ + G++ P F+ L L D VL + Sbjct: 610 REFEVAYQPIVCLDTRRVCGFEALVRWRHPEHGVILPGDFISLAEDTGLIYAIDNFVLVA 669 Query: 559 LLKWLATHPCD-----KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 + + ++N+ Q + ++ R ++PQA+ +EITE Sbjct: 670 ACAQVKLWQTTFGHLMGELLTLNINISGKHFGQPMLLSQVTRALDDSGLNPQALNIEITE 729 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N + ++QL G ++ IDDFGTGY++ L+R D++K+D F+ + N Sbjct: 730 SALMDNPAVAEEVLKQLKSLGAKVCIDDFGTGYSSLSYLQRFPIDVVKVDRSFIDGVEGN 789 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR++ L ++ L +VAE VET Q A L G +Y+QG+L RP + Sbjct: 790 LDSQAIVRTVFSLGESLGLKIVAEGVETPAQLAFLENEGCRYVQGFLFYRPLSATE 845 >UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPK3_9GAMM Length = 842 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 118/686 (17%), Positives = 221/686 (32%), Gaps = 41/686 (5%) Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 ++ G+ V L A L + + ++ G+V + + L+ Sbjct: 147 APRGMLAGALVLVALLAWVGLWHEQRIPALFIPGEGLTPFKIALEGVVVALHAATLVILL 206 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL------------IYNMLFYYLTRMIV 191 A I ++ L + Y I Sbjct: 207 LRPQLMQRPGMPLVAAALMILMASEVFFTLYDNLSDGFFVLGHIYKVAAYALIYWAVFIE 266 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVPVFF 248 S R +++R L A VL+ + + P Sbjct: 267 SVRAPMAQLRAAHRDIELRQQRYEQLIDTAPDGVLVTDGGGTILMANRNLERLFGYPRRH 326 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL---------QGVETEYSLAFILAVLI 299 +I + +V N ++ + + TE+ + L Sbjct: 327 LIGQPVENLIPERLREHHRSVRLQQGDNISERTMGQIPDLRGRRLDGTEFPVDISLNAFE 386 Query: 300 SFSVC-LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + +R + R QA D LT LPN L E Sbjct: 387 DQGGRRITAFIRDITDRQRREARIQHQATHDSLTGLPNRWLLHDRLAQSIAHASRHEHRI 446 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D+ + ++ +G +R + + L + + + G E +++L Sbjct: 447 AVMLLDLDHFKMINDTFGHHEGDELLREVAQRLKDAAGTDATIGRFGGDEFMILLPEITD 506 Query: 411 EGRLQHMVNILNSR---QIHWN-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E ++ + ++ H F + L+ ++ Sbjct: 507 ELQVGERGQEILAQFDRPFHTGPTRQFSSSASLGIALFPQDARDANTLVRYADMAMYEAK 566 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEIL 523 E + Q + L ++ AL+ L L+ QP+ + + +L Sbjct: 567 RSGRN-TYAFYSEHLDAQVRAEQQLQERLKHALEHDQLALHFQPLIDAHSGAVTAAEALL 625 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 + G + P +F+P L V+ + LA +N+ L Sbjct: 626 RWNDPELGAVPPSRFIPSAEANGLILPLGDWVIRRACQQLADWAQLDVDTSICINVSALQ 685 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q ++ R+ K SP+ + +E+TE A ++ + ++ L G R+++DDFG Sbjct: 686 FRQPDLVSRLAAALKEAGASPEHLEIEVTETVAMADVALTREHLSGLKALGVRVSLDDFG 745 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK L D IKID F+ I + MI+RS+ L + L +VAE VET + Sbjct: 746 TGYSSLAYLKSLPIDKIKIDRSFIAGIGHDRDAEMILRSVMGLGHSLHLKLVAEGVETAE 805 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L + G QG+ + + Sbjct: 806 QLAFLRREGCDLYQGWFYSPALSVEE 831 >UniRef50_Q2BJI5 Regulatory component of sensory transduction system n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJI5_9GAMM Length = 872 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 92/477 (19%), Positives = 185/477 (38%), Gaps = 21/477 (4%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 W L Q + EY+ + L + + ++ QA Sbjct: 386 WRGELANLRKNGQRY-----WEYTHISPVTDETGQITHYLIIKNDITERKEQEQKIIHQA 440 Query: 327 LTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN + + +D + ++ G + + Sbjct: 441 HFDSLTELPNRSLAMDRLAQGVIKASRNNDVLALMFIDLDGFKNVNDSLGHDIGDQLLIH 500 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDM 435 + L ++ + + +L G E L+++ G + ++N + + + L + Sbjct: 501 ASKRLSDSVRNTDTVARLGGDEFLIIMEGLVSRRDCLPVLNKIKESFGAPFNIGSNELKV 560 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 F + + LL Q+ + + +++ + N + Sbjct: 561 TPSIGLSLFPDDGQDGDVLLRNADLAMYQAKEAGRN-THHFFNQEMHKNLRRRLEIENQL 619 Query: 496 RTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 + AL++G+L L QPI + +G + ++ G + PD+F+ + Q L Sbjct: 620 KHALEKGELFLLYQPIVEAKTYELKGLEALIRWDNELLGRVMPDEFISVAEQSGLIIPIG 679 Query: 553 LQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 ++ +L + + S+N+ P + +++ I ++Y + +ILE+ Sbjct: 680 NWLVNEVLAQMKCWHGSVLEDIAISINVSPRQIQDQSLQPLINDALEKYSFTASKLILEV 739 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N + N+++L G ++A+DDFGTGY++ LK DI+KID FV+DI Sbjct: 740 TEGLLIRNPLEAKSNLQRLKDLGVQLAMDDFGTGYSSLSNLKNFPFDILKIDRTFVRDIE 799 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + D +V + + + L +VAE +ET+ Q +L + +QG+ RP Sbjct: 800 KDDDDYALVSAAVSMGRGLGLRIVAEGIETKNQLEILSDMQCDSVQGFYFSRPLSAE 856 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 100/465 (21%), Positives = 187/465 (40%), Gaps = 32/465 (6%) Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ-------- 342 + + L + L V+ R++ R A D LT LPN R + Sbjct: 280 VEERTSQLSKRNQELNTAVKQVTRTK---NRLRKMAYYDALTSLPNRRLFTEQLSLLLKL 336 Query: 343 APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY-------- 394 A + + L +DN + ++ G +R + + L +++++ + Sbjct: 337 AQRNKQTLALLFLDLDNFKRINDSLGHSAGDLLLREVGQRLSKCVRDSDVVAHYADPTAK 396 Query: 395 ----QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGN 447 +L G E +VL+ + + + L S + + L + + Sbjct: 397 IDVSRLGGDEFTVVLNDLDAPESVGVVAERLILALSEPMLIDGHELVITPSIGIAIAPEH 456 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 ++ LL + A E + ++ L N +R A+D +L+L+ Sbjct: 457 ANEVEGLLRCSDTAMYHAKASGK-STYLVYESSMEEAGLDRLTLENDLRKAMDNDELVLF 515 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + + G + +L + + G++ P KF+PL + L V+ K + Sbjct: 516 YQPQVDTRSGKVVGAEALLRWMHPEQGLIPPFKFIPLAEEMGLIGEMGDWVIREACKQVQ 575 Query: 565 THPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 T + +VN+ L + R+ + + P + LE+TE + +S Sbjct: 576 TFAKKGVSLPKVAVNVSALQFT-PSFTRRVKSILDELAVDPATLELELTEGVVMGDTNAS 634 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +L G ++IDDFGTGY++ L R D +KID FV + + A +VR+I Sbjct: 635 VQALAELKDLGVSLSIDDFGTGYSSLSYLSRFPLDELKIDRSFVIEANNSEQGASLVRAI 694 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A++ L +VAE VET +Q + G +QGY+ +P P Sbjct: 695 IAMAQSLGLELVAEGVETDEQYEFMTTAGAHVIQGYMFSQPVPAE 739 >UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6X9_KANKD Length = 855 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 99/489 (20%), Positives = 194/489 (39%), Gaps = 19/489 (3%) Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL--AFILAVLISFSVC-LLYMVRIYHRS 315 R L+ + + + + L + S ++ Sbjct: 360 RQKTLDQFKEIFITGHMVHEYRVRDAEGNTRYIRDERQLIPQSNHSENEIVGTWSDLTDV 419 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + DPLT LPN + LE+ E + + + ID + ++ Sbjct: 420 YEREDELKFLSHYDPLTHLPNRQKLEERIEESIERSDELKECFAILSIDIDRFKKINETL 479 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 + I I L ++ ++ L ++ G + + V++ ++ + + R Sbjct: 480 SYQVGDAVIARIAERLKHILNVDDVLARVGGDDFVFVINDKVDVKKVSSIARKVLKRFAV 539 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + L + F + LL + + + + +S Sbjct: 540 PLRIDEHELMVTASIGIAMFPEDGRDPDTLLKNAEIARYSAKDKGRN-SFEFFNDQLSEG 598 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 + ++L + +R A+++ +L+L+ QP+ + G + ++ G++ P KF+PL Sbjct: 599 MHENLMLESALRMAVERNELVLHYQPLVSFNDFTVVGVEALIRWQHPIQGLIPPYKFIPL 658 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + + L VL + + R SVN+ + + ++ + K Sbjct: 659 AEETGIIGDIGLWVLREACRQMVEWDKAGLNVARASVNISVQQIETGLLPKQVESVLKET 718 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 ++ + + LE+TE + + + + + K G ++A+DDFGTGY++ LKRL D + Sbjct: 719 GLAAERLYLELTESTIMQDPQQASLAMTEFQKMGVKLAVDDFGTGYSSMAYLKRLPLDRL 778 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+KDI +T D +I ++I LAK+ L VAE VE + Q L LG QGYL Sbjct: 779 KIDRSFIKDIGADTNDEVICKAIVQLAKSLGLETVAEGVEEESQAEFLKGLGCDVAQGYL 838 Query: 721 IGRPQPLAD 729 +P P + Sbjct: 839 YSKPVPALE 847 >UniRef50_B8KPF2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPF2_9GAMM Length = 609 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 96/448 (21%), Positives = 175/448 (39%), Gaps = 35/448 (7%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + R A DPLT LPN R+ + + + +DN + ++ Sbjct: 138 LKRQEDRLRYLAYFDPLTSLPNRRSFNEQLNRILKRSQRLNTFSALLFIDLDNFKRINDS 197 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKL------------------YQLPGSELLLVLSGP 408 G + I + L+ ++E++ + +L G E +VL+ Sbjct: 198 IGHGRGDRLLVEISKRLINELREDDAISYYSDSSAEEEHDGNTEIARLGGDEFTVVLADV 257 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 ++ + + S I + + + E + L+ + Sbjct: 258 LHTDDVERIALRIMKTLSEPIPLQTHNPVVTPSIGIAMYPQDGEDAESLVRNADTAMYAA 317 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 A E ++ ++ + + L +R A+ L L QP + + Sbjct: 318 KADGRA-CFRFYNEEMNARSVEHLKLEEDLREAMRTDQLELRYQPQVETVTGAVVSLEAL 376 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMP 581 + + G+++P F+P+ VL+ + + R VN+ P Sbjct: 377 VRWKHPERGMISPADFIPVAESTGQIIELGEWVLKEVARHCVYWDSIGLASFRVCVNISP 436 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L Q ++ I R + P + LE+TE ++ ES++ + QL G +A+DD Sbjct: 437 LQFNQPDLLHYIKGFLGRSGLDPHRLELELTESAIMTDGESNILKLSQLKSLGLDLAVDD 496 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+R + +KID FV D+ + A IV +I LAK ++ +AE +ET Sbjct: 497 FGTGYSSLSYLRRFPINTLKIDQSFVADM-NSADGAAIVDAIIALAKTLNMRSIAEGIET 555 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q A L K GV +QG+ RP D Sbjct: 556 EEQLAYLAKRGVDLMQGFYFARPLYPED 583 >UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XX17_LEPCP Length = 790 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 132/727 (18%), Positives = 245/727 (33%), Gaps = 29/727 (3%) Query: 27 LSRFISPLAIIHSS-YIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQ 85 L SP A++ + L + L L L++ W +L T ++ + Sbjct: 32 LFYRQSPAALLGGAIGALLVVLALQDALPALWLRSWLLAAELLIVGRLTTTLHYMHGGAE 91 Query: 86 TAVMLGSQTFVVLCACA--ILRWQLGTRWRYGLTSRYVWQRLFWLGLV----------TP 133 + + ++ A + LG T++ L L ++ P Sbjct: 92 RHSLARWRQLALVFTIAQGLTWGSLGLMSLAVPTAQDEALILVCLLVIVAGSAALVGTLP 151 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + + L + + + F + T L +M R S Sbjct: 152 LLVPLFGVLTLLPITLVMALGSSGAQHFLAFCSFTFMLTVTVSLPRSMQRAIRARHSASL 211 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 L R ++A + + A + + A + ++ Sbjct: 212 AQRDTLQRLEMAEQMAHVGHLVWDAGAAQAQLSAGAQRMLGLDGVGALEHRDIVELVVPA 271 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYH 313 ++R N + + GV + + L+ ++ Sbjct: 272 DRERVRLLIRNSLQQTQSQLRYETQVSTPAGVRDLMVVQHLETGADGRVTRLMSTLQDTS 331 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKSFCCLRIDNLEFMSRHYGL 369 + R A DPLT L N QA Q + L +D+ + ++ G Sbjct: 332 ELKQTQRELQKLAFNDPLTGLGNRAWFMQALAGMLRQGERSALLMLDLDHFKAINDTLGH 391 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQI 426 + + L ++ + L +L G E ++L + L R Sbjct: 392 HAGDLLLGMAAQRLQRVLGDTASLARLGGDEFAIILPAIASSAAAAQQAQALIDTLTRPF 451 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + + + + LL + S + Sbjct: 452 SVAGVEVYVSASIGIAVSPQDADDTEALLRCADVAMFDAKGLGRA-GYQFYAAQQSERAR 510 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++VLL +R A+++G+L L+ QP + G + +L + G++ PD+F+P+ Sbjct: 511 ERVLLEGDLRRAIERGELELHYQPKVDMRTDRVVGAEALLRWHHAERGMVPPDRFIPVAE 570 Query: 544 QFNLSARFDLQVLESLLKWLATH-----PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 L VL + ++ + +VNL P + + + Sbjct: 571 DTGLIIPIGEWVLRTACTAATHWNRTRRARGQEALKIAVNLSPRQFWSPHFVAMVRAVMH 630 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 P+ + LEITE + +L + GF +AIDDFGTGY+ L R Sbjct: 631 ETGCRPEWIELEITESLLIDTRGQVSEILAELSRLGFTLAIDDFGTGYSALGYLTRFPIS 690 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV ++ T+ A +VR+I + + L +VAE VET +Q +L ++G Q QG Sbjct: 691 TLKIDRSFVNEVATHPARASLVRAIVAMGHSLQLELVAEGVETHEQVQVLREMGCQLAQG 750 Query: 719 YLIGRPQ 725 +L GRPQ Sbjct: 751 WLYGRPQ 757 >UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Methylobacterium RepID=B1ZEQ0_METPB Length = 716 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 109/573 (19%), Positives = 208/573 (36%), Gaps = 39/573 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVP- 245 + H ++ A + +R + + + ++ + +P Sbjct: 121 VTEQHRTRLALVEAHAELSEQNRRFDAALENMTHGLCMFDAEQRLLVWNRRYLEIFGLPE 180 Query: 246 -----------VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + ++ LG K ++ T + L+ + +A Sbjct: 181 GALHVGMGQRAIIEVLVALGRYKRGLTVDAVSEGTRTSLTDEGPKAVLRELADGRVIAVT 240 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ-------APEQE 347 + + R A D LT LPN L + A Sbjct: 241 HRPMAEGGGW-VATFEDITERRRNEARIIHMARHDGLTDLPNRTRLREIGAERVEALRTG 299 Query: 348 A--GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 A + CL +D + ++ +G + +R++ L ++ ++ + +L G E + L Sbjct: 300 ADGQLAVLCLDLDRFKPVNDSFGHAVGDALLRAVAGRLRGHVRGHDVVARLGGDEFAV-L 358 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF---DGNQETLQPLLGQLS 459 S E + L + + +++G D ++ LL + Sbjct: 359 SHVEDAAGAMGLAERLIEIVAAPYRLDGITVEIGMSVGIALAGAEDDLPRDIECLLKEAD 418 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EG 516 ++ A E + +++ L +R AL Q L+ QP+ + Sbjct: 419 IALYEAKTGGRGTA-RLFEPQMDATLRERLGLERELREALAQSRFELHYQPLVDLSDNRI 477 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G + ++ + G++ P F+PL + L VL + A P + Sbjct: 478 TGMEALVRWRHPERGLVNPAVFIPLAEETGLIVPIGEWVLSQACRDAAAWPDA---ISVA 534 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ PL L + ++ + + LEITE + E ++ + L + G R Sbjct: 535 VNVSPLQLRNRGFVQSVLGALATSGLKASRLELEITESVLLDDTEVNLETLHSLRRLGVR 594 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I++DDFGTGY++ L+R D IKID FV D + I+R+I L + ++ + Sbjct: 595 ISMDDFGTGYSSISYLRRFPFDKIKIDRSFVPDSAGQSDAGAIIRAIVSLGASLGITTLV 654 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+ Q A + G Q +QGYL P+P+ + Sbjct: 655 EGVETEPQLATIRAEGAQEVQGYLFSPPRPVHE 687 >UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Photobacterium profundum RepID=Q1YXX2_PHOPR Length = 725 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 105/429 (24%), Positives = 187/429 (43%), Gaps = 16/429 (3%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHY 367 + A D LT L N R L + EQ + C +D+ + ++ Sbjct: 289 KQKTHELEKFAFYDYLTGLANRRLLNEHLEQVIQQTECCGNSAALLCFDLDDFKRINDSQ 348 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 G + ++ I L ++ +N+ + +L G E ++LS + + L S Sbjct: 349 GHDIGDCVLQQISHRLNSVVNKNDIVARLGGDEFTVLLSASYSASDAGRIAGQLIEVISE 408 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 I NN L + + + LL + + + + Sbjct: 409 PIFLNNKELSVSASVGITMIPSDGNDVSTLLRNADMAMYSAKKSGK-RNYHFFNKALQKK 467 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 +V + ++ TA+ + +L+ QP+ N + Y+ ++ G++ P++F+ + Sbjct: 468 ALDKVSIEESLDTAISKKQFVLHYQPVFNFYSNKLCCYEALIRWNHPREGLLYPERFIGI 527 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + V++ + + H K R +VNL P ++ I R+ + Sbjct: 528 AEESGKIKNIGYWVIQEVCNVIKMHQLHIGKRHRIAVNLSPRQFNDPDLLENIRRIIRNV 587 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 I + + +EITE N ES++Y + Q + G +AIDDFGTGY++ LKRL D + Sbjct: 588 GIDARFLEIEITESTLMENVESAIYTLRQFKELGITVAIDDFGTGYSSLAMLKRLPVDKL 647 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FVKD+ +N D IV+++ +A +SV+AE +ETQ+Q LL + G + QGYL Sbjct: 648 KIDRSFVKDLDSNNSDQKIVQALISMAHTLQISVIAEGIETQEQFNLLQQYGCDFGQGYL 707 Query: 721 IGRPQPLAD 729 RP P+ + Sbjct: 708 FSRPVPITE 716 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 106/504 (21%), Positives = 210/504 (41%), Gaps = 29/504 (5%) Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 +G ++ FI +L V P L A + N + + E+ L + Sbjct: 177 SGGILLALFISHSLTV-----PLNQLIKATHRITTGNLSYRIHLKNKDEFFL-----LAK 226 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QEAGK 350 F+ ++ + + N + D LT L N + Q E Q+ Sbjct: 227 EFNQMSDWLEETLKKYQENNAKLQHDLFHDNLTGLANRVYILQEIEAEIKEKKANQDHCF 286 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L D + ++ G + + +I + L +++++ +L G E ++++ Sbjct: 287 AVLFLDCDRFKVINDSLGHDVGDEVLINIAQRLNLCIRKHDIAARLGGDEFVILIKNLSD 346 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++ + + + S + N L + N E LL + Sbjct: 347 IKQVTQIADRILKQMSEPLILENQQLVITMSIGVVVSQENYENADDLLRDADITMYHAKQ 406 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + ++ Q +++ + +++R AL++ + LY QPI + + G++ +L Sbjct: 407 QGKAQ-YAIFKPIMHTQALERLEVESSLRKALEKQEFYLYYQPIISFKTSQLIGFEALLR 465 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMP 581 G ++P F+P+ + L VL+ ++ + SVN+ Sbjct: 466 WHHPTQGWISPATFIPIAEETGLIVSLGQWVLQEACHQISIWQSHFPFSEPLKVSVNISS 525 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L Q + ++ ++ + I + LEITE +N ES+ + ++ L K G +I+IDD Sbjct: 526 FQLNQMDFVEQVKKVLEESKIKASQLNLEITETVIMNNIESTSFKLQCLQKLGVKISIDD 585 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L++L DI+KID FV+ + +N + I+ +I L + +AE +ET Sbjct: 586 FGTGYSSLNYLQQLPIDILKIDRSFVRRLESNPSEFQIIEAIIKLGNILGMETLAEGIET 645 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQ 725 +Q L+ LGV Y QG++ +P Sbjct: 646 SEQYNLIQSLGVDYAQGFIFSKPL 669 >UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=45 Tax=Rhizobiales RepID=C6AVD3_RHILS Length = 717 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 97/479 (20%), Positives = 182/479 (37%), Gaps = 22/479 (4%) Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC----LLYMVRIYHRSEWLNRRWH 323 A +++ + + L + L + LL + + + + Sbjct: 227 AFEANAAISFEETMQRADGVPRILRTVKRALPTPEGHAPRYLLGISQDVTEERAVEAKLA 286 Query: 324 LQALTDPLTLLPNFRALEQAPEQE-------AGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A DPLT LPN A + Q + + + +D+ + ++ G + Sbjct: 287 HLATRDPLTGLPNRAAFSEHINQRAVEATADSAIALLYIDVDHFKHINDSKGHAAGDALL 346 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 + LL L E + + +L G E +VL + R L S + Sbjct: 347 CQVSERLLQLAGEGDLVARLGGDEFAVVLE-LDEPERAGRFAQRLLQTLSHAFDLDGARE 405 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + L+ + E + ++ ++ Sbjct: 406 HVTCSVGIALAPDHAGDADVLMRHADLALYAAKESGR-SIYRFYETEMRLAAQRRHVMTA 464 Query: 494 TIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 + AL++ L+ QPI N G++ ++ + G++ P +F+PL + L Sbjct: 465 ELWEALEKRQFELHYQPIVQLDNDGIGGFEALIRWRHPERGLVAPMEFIPLAEETGLIVP 524 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 V+ + P R +VNL ++ ++ ++ + +E Sbjct: 525 IGDWVIREACRAAGGWP---VHLRIAVNLSVSQFRHASLLSTVVAALDETGLTADRLEIE 581 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE ++A+ S+ + L G RIAIDDFGTGY++ L+ D IK+D FV I Sbjct: 582 ITESVFLTDADQSLPRLRALKALGVRIAIDDFGTGYSSLSYLRSFPFDKIKLDRSFVSGI 641 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ + IVR++ + + + +AE +ET++Q L G +QGYL+GRP P + Sbjct: 642 ETDAGNLAIVRAVVGIGSGFNATTLAEGIETEEQLQKLRAEGFSEVQGYLLGRPMPQHE 700 >UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=9 Tax=Alphaproteobacteria RepID=B1M3H8_METRJ Length = 829 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 93/490 (18%), Positives = 179/490 (36%), Gaps = 19/490 (3%) Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYH 313 + + + L L + + ++ + +L Sbjct: 326 LSRAPADLAIAAEEATELGLPAAGSLHRRADGSAIEVSLFQRAMPFEGRQAVLEAAIDMT 385 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 R A D LT LPN CL +D + ++ Sbjct: 386 ERRRAEARIAHMAHHDALTGLPNRVLFRDRLGEAIARHARDGEEAVLLCLDLDKFKIVND 445 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + +R + +++++ + +L G E +++ G + ++ + + Sbjct: 446 TLGHPVGDALLREAAERIAGCLRKDDLVARLGGDEFAILVRGMDLPALADGLIARVIAEL 505 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 R +G + + L+ ++ A E + Sbjct: 506 GRPFRLEGQDCHIGTSIGVACLPRDGTDPETLMKNADLALYRAKAEGG-STFRCFEPEMD 564 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 + N +R A +G L QP+ + ++ +L + G ++P +F+ Sbjct: 565 AWVQARRRRENELREAFARGQFSLVYQPLMDARSDRILAFEALLRWHHPEHGPVSPAEFV 624 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 PL + L V+++ AT P R +VNL P+ + + + Sbjct: 625 PLAEETGLIVPIGAWVMQTAFAEAATWPE---TIRLAVNLSPIQFRNRTLVETVRGALAA 681 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P+ + LEITE +++ +++ + L G RIA+DDFGTGY++ L+ D Sbjct: 682 TGLDPRRLELEITESVLLADSAANLATLHALRDMGIRIAMDDFGTGYSSLSYLRSFPFDK 741 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 IK+D FV + NT IVR++ L + ++ AE VET +Q A+L G +QG+ Sbjct: 742 IKLDRSFVSQVGENTHCTAIVRAVASLGTSLGIATTAEGVETPEQLAMLRAEGYDEVQGF 801 Query: 720 LIGRPQPLAD 729 L R P + Sbjct: 802 LFSRAVPGPE 811 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 98/477 (20%), Positives = 179/477 (37%), Gaps = 22/477 (4%) Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 W + +L+ + + V + M + +R Sbjct: 1054 VWQGEIWNRRKNGEPYLEWLS-----INTVKDKNGKVVNYVGMFSDITKVRESQQRIEYL 1108 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN + +DN + ++ G ++ Sbjct: 1109 ATHDELTGLPNRALFNDRLNLALAHAERSRESVGVVFIDLDNFKVVNDTLGHETGDKLLK 1168 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDM 435 LL ++ + + +L G E +++L + + +L S H+ + Sbjct: 1169 QAAMRLLECVRAEDTVARLGGDEFVVLLVNADRQQATLTAERLLTGLSTSYHFGEHECFI 1228 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 F + L+ ++ H ++ Q +K++ L + Sbjct: 1229 SASIGLSMFPEDASDANSLMRNADSAMYRAKDHGKN-GFRFFSADLASQASKRLALETGL 1287 Query: 496 RTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A++ G+L ++ QP E G + ++ Y+G ++ P F+P+ Q +L D Sbjct: 1288 RRAIENGELFVHYQPQVRLECDTVVGAEALVRWR-YNGEVIDPVVFIPIAEQSHLIFAID 1346 Query: 553 LQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + + R SVN+ + +A ++ + + +SPQ + +EI Sbjct: 1347 DWVLGEACRQIIEWDRAGLPPLRISVNISARHFRKDGMAADLMDIVSAHGVSPQRLCIEI 1406 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + + + + +L + G RI+IDDFGTG+++ LKR +KI FV I Sbjct: 1407 TEGVLM-DVDRAQRMLAELVESGLRISIDDFGTGFSSLSYLKRFPIHELKIARSFVDGIS 1465 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T+ D I I LA+ +SVV E +E Q A L G QG+L +P Sbjct: 1466 TDADDRAIASVIISLARQLGMSVVGEGIERTGQHAELEAFGCHRGQGFLYAQPLAPD 1522 >UniRef50_A2SCH7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Methylibium petroleiphilum PM1 RepID=A2SCH7_METPP Length = 806 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 101/548 (18%), Positives = 199/548 (36%), Gaps = 21/548 (3%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF-IIFTLGVGKLR 259 R E+R +A ++ + + G LV + Sbjct: 248 RLAEQAVRESEERLGKFMQASAEGIVFHKGGVITDANAPIGMLVGYGLDELMGRRTLDFV 307 Query: 260 YPFLNLTWAVSTLCLLN--YNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSE 316 P A Y + + FI+ ++ L + +VR Sbjct: 308 APDQVSKVAAVMSSGQETTYESALIDKSGRRIPVEFIVRTMMRGDERLRMTIVRDLRDRH 367 Query: 317 WLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHYG 368 H A D LT LPN A +A + + +D+ + ++ G Sbjct: 368 AAQAHIHHLAHHDALTGLPNRLAFMAEIDQLMARAAASREALALLFIDLDHFKRVNDSLG 427 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + ++++ + + +++ ++ + + G E ++++ G + + L + Sbjct: 428 HLAGDELLKTVAQRIGAVLRASDVVARFGGDEFMVLIGGGPRLEDVADVARKLLAAIEVP 487 Query: 426 IHWN-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + F G+ T L+ ++ A + ++ Sbjct: 488 LDAEVGRSISVTPSIGIAMFPGDGITPAELIKHADTAMYRAKARGRA-TYQFFDPTLASN 546 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 ++L + AL++G+ +L+ QP + G + ++ + G++ PD+F+PL Sbjct: 547 AYAALVLEGELAQALERGEFVLHFQPQVRAGDGVLVGAEALIRWQHPERGLLLPDQFIPL 606 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 Q L VL + D +VNL + + + + Sbjct: 607 AEQQRLMLPIGTWVLHEAARAARRWHDDGLCAVPVAVNLSAVQFQAPDFVSTVAQALAGA 666 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + + LE+TE + QL G R+++DDFGTGY++ LK L D + Sbjct: 667 GLPGRLLELELTERMLMDELPEVSGRLAQLKALGIRLSVDDFGTGYSSLGHLKSLPIDKM 726 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV D+ I R+I +A++ ++V+AE VET+ Q+A L + LQG Sbjct: 727 KIDRSFVVDLPEARGSVAIARAIIQMARSLGITVIAEGVETEAQRAFLAREQCDELQGEA 786 Query: 721 IGRPQPLA 728 I L Sbjct: 787 ISPSLSLQ 794 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 88/465 (18%), Positives = 184/465 (39%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + ++ +AV+ + ++ + + R A DPLT LPN Sbjct: 345 RKDGEMFAGWQNIAVVRDTDGKVQNFVAVISDITTRKQVEERLSYAANHDPLTRLPNRTL 404 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 ++ + + +D + ++ G + ++ + L +++ + Sbjct: 405 FQERLTRAIARASRNHNLVALLFIDLDRFKQVNDTMGHLAGDMLLQQVAERLSSCIRQGD 464 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L + + + L + + + + Sbjct: 465 TVARLSGDEFTIILEDVQDPRDAAVVGHKVLRLLQEPVALTGGEAHISSSIGVSLYPTDA 524 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 Q LL ++ E V+ + +++ L N +R A+DQG LL+ Sbjct: 525 GDPQTLLKLADAAMYRAKHLGRNSC-QFHSEAVNAEAFERLALENALRGAVDQGQFLLHY 583 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + + +L + G++ P++FL L + + V + + Sbjct: 584 QPIFDVKSGRAVAVEALLRWRHPEVGVVAPNQFLALAEETGMIVPIGRWVFDQACRQAKL 643 Query: 566 HPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R +NL P L Q ++ + + + PQA++LE+ E A Sbjct: 644 WRDAGHVDLRLHINLSPRQLRQPDLIEMVAAALEVSQLPPQALVLEVMETCVIDKAFDPS 703 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + G +AID+FG+GY+++ L+RL I+K+ FV+++ ++ ++ IV +I Sbjct: 704 ALFARFAALGVGLAIDEFGSGYSSFAFLRRLPVTILKVAQSFVRNLSSSEDESEIVTAIV 763 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA+ ++VVA +E + Q L G +QG+L+ +P P + Sbjct: 764 ALARGLHMTVVAPGIENKAQLDFLTGFGCDKVQGFLLSKPLPGTE 808 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 98/467 (20%), Positives = 189/467 (40%), Gaps = 23/467 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T ++ ++ + C + + + A DPLT LPN Sbjct: 280 RKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDISLLKQTEAEVAQLAWHDPLTRLPNRSK 339 Query: 340 LEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L A ++ + + +D + ++ +G + + S+ L L+ + Sbjct: 340 LTTISQQQIKLAANRKTRLALLLIDVDLFKHINDSFGHLAGDKVLLSLSERLAALLGAED 399 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHW-----NNTGLDMGYGAAWGRFDG 446 L ++ G E ++L+ + +++ + R + + + Sbjct: 400 TLARIGGDEF-VLLTQVRRRDDIPVILSAI-QRAFDTSFDTSEGESVRLSASIGIAVYPD 457 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + LL ++ E ++ + +Q+ L +R A+ L L Sbjct: 458 DGDNPDTLLKNADAAMYRAKQQGRNR-HAFYTEQMTQSSMQQLRLQTALRGAVKNSALSL 516 Query: 507 YAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 QP N G + + ++ G+++P +F+P+ L L VL+ + Sbjct: 517 VYQPKINLRTRKLIGVEALCRWTDHELGVVSPAEFIPVAESIGLMPEIGLWVLKEACRQA 576 Query: 564 ATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 P R +VN+ L N A + R+ + +SP A+ LEITE N S Sbjct: 577 RIWRDQGLNPGRMAVNVSGSQLTGDNFADSVARVLTQTGLSPDALELEITESVVLDNPAS 636 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ +++L G +A+DDFGTGY++ L++L + +KID FV+++ T+ I + Sbjct: 637 AIDTMDKLRGMGVSLALDDFGTGYSSLSYLRKLPLNKLKIDQSFVRELPTDQDSGAIAMA 696 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I + +A L V+AE VE + Q L +LG QGYL RP ++ Sbjct: 697 IIAMGEALKLGVIAEGVENETQAEFLLRLGCTEAQGYLFARPLLASE 743 >UniRef50_A3ESX6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Leptospirillum sp. Group II RepID=A3ESX6_9BACT Length = 703 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 96/573 (16%), Positives = 198/573 (34%), Gaps = 30/573 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL------AALSVLLLLLCTPYEN 236 F R I + K + T ++ Sbjct: 113 FMVAVRDISRRKQLIHDLHLEKEQWFVTLKSIGDAVVTTDEHGRVTYVNPVAEHLTGWKV 172 Query: 237 DFIAGYLVP-VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + G+ V VF I+ P + + L N+ L E+S+ Sbjct: 173 EEADGHPVSKVFRIVNEYSREPAENPVDRALLEGTIVGLANHTL-LLSRSGEEFSIEDSA 231 Query: 296 AVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 A + + + + + R L +R QA D LT LPN + Sbjct: 232 APIQDNNGEIRGCIIVFRDVTEKRKLEQRIAYQANFDSLTDLPNRHLFQDRLSRAVGQAH 291 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + L +D + ++ G + + + L +++E + + ++ G E ++ Sbjct: 292 RTGSLVALLYLDVDYFKNINDRMGHPYGDRVLVELGKRLKTVVRETDTIARIGGDEFAVI 351 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + L + + + D+ + + L+ Sbjct: 352 LCDLHDRSEAMVLGRRLMIEAAMPFRIDGSRADLTVSIGVALYPEDGTDATTLIRNADIA 411 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EG 518 Q + ++ + + +R ALD+ L QPI + G Sbjct: 412 LYQVKREGRN-NIAFFSREMNRFVQSTLKTESELREALDKNRFYLAYQPIVHLGSALAVG 470 Query: 519 YDEILARLKYDGGIM-TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 + +L G + P++F+P+ + L +L ++ R + Sbjct: 471 VEALLRWRH--RGKVRFPEEFVPIAEEMGLILPLGQWILREAIREAGVWIRQGINLGRLT 528 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + + + + + + P + +EITE ++ + ++ + G + Sbjct: 529 VNVSVKQIHSEGFSDFLESTLRENGLPPSVLEIEITERTLMFRDHHTVSTLNRIREMGVK 588 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFG GY++ ++ + +KID F+ +++ N D IVR+I +A++ S+ VVA Sbjct: 589 VSIDDFGIGYSSLNYIRNFPVNTLKIDRSFLAEMLDNHYDRAIVRAILAMAQSLSIDVVA 648 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VE +Q L + G QG+ P + Sbjct: 649 EGVERLEQARFLQENGCLMAQGFFYSEPVSPEE 681 >UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3D1_GEOSF Length = 934 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 107/660 (16%), Positives = 227/660 (34%), Gaps = 38/660 (5%) Query: 93 QTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLK 152 + + A A + + + WLG YL + Sbjct: 269 ANYPLKEAYAPVEQAKFYVALASFFGIILSILVVWLG---------MRYLTMPLLNMARH 319 Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 I + G+ V L L ++ Q R + + + Sbjct: 320 IRSMHGEPGKTSPVEVLSEDEIGELGLA-----FNDLLDRVGKEQEALREAVLTAKNERA 374 Query: 213 RAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 ++ + + ++ + I + + + Sbjct: 375 KSEAIVAALGDGMSMVDTDFKVLYQNKVHQTLAGGEFIGSYCYQAFEGKDAPCSGCPVAM 434 Query: 273 C----LLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQ 325 L++ + ++ + L + L + + + +VR R + + Sbjct: 435 SFADGLVHTAERVVERDGEKLYLEITASPLFDYDGRINAGIEVVRNISRRKQMESAIEQM 494 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN R + + + L +D+ + ++ G + ++ Sbjct: 495 AFHDALTGLPNRRLFNERLAQAIAYAQRNDQFLAVMFLDLDHFKDINDSLGHTIGDELLK 554 Query: 378 SICRTLLPL-MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGL 433 + L + + + + G E LL LS + + H+ +L + L Sbjct: 555 EVATRLKRCGRRAEDTIARQGGDEFLLFLSEIKDKEDAVHLAALLLQEMTAPFILSGYEL 614 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + + ++ L ++ +++ + + +++ + Sbjct: 615 FVSVSIGISIYPHDGRDVETLASNADIAMYRAKQQGRN-SVNLYNHSMGEKNRQRLTVET 673 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 ++R A+ + L+L+ QP + + G + ++ + G++ P F+P + L Sbjct: 674 SLRRAIGKNQLVLHYQPQVSVHSGKIIGMEALVRWNHPEQGLLLPTSFIPQAEETGLILD 733 Query: 551 FDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VLE+ + SVN L Q++ ++++ K+ + + + L Sbjct: 734 LGEWVLETAAAQNKAWQDAGYPPVKISVNYSQRQLRQQDFVEKLLKSLKQTGLEARWLEL 793 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EI E ++ + L G RIAID+FG GY+ ++L D +KID FV Sbjct: 794 EIREAVMAEGIMDNLQALAALRDVGVRIAIDNFGAGYSCLKQLGDFPLDALKIDLSFVSQ 853 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I ++ + I ++ LAK LSV+A+ VET++Q LL LG +QG P P + Sbjct: 854 ISSSEVKKAIAGTVASLAKGLHLSVIAQGVETKEQMQLLCSLGYGEMQGNYFSNPLPAEE 913 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 102/455 (22%), Positives = 188/455 (41%), Gaps = 16/455 (3%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------AL 340 Y L I + + + R + + + A D T LPN L Sbjct: 506 YELKNIPITVEGEPAGIYCIGRNITEQKRIEQEMTQLAYYDKDTGLPNRLKFMEELDDLL 565 Query: 341 EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 ++A +++ + + ID + ++ G +R I + ++ + G + Sbjct: 566 QKAKKKKRPLAVLFMDIDRFKLINDSLGHYAGDQILRQIAGRIEAILPPGSFFGRFSGDK 625 Query: 401 LLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 L+L+ R+ + N + +++ + + G+ + L+ Sbjct: 626 FTLILAKEADSSRVTKLSNHILQAISSPVYYGEQEFFITGSIGASLYPGDGHEKETLMKN 685 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE 517 +S L ++ QT ++ L + +R AL + + L QP+ N E Sbjct: 686 ADIAMNRSKHQGGNR-LTYYSTEMNEQTLLKLELESYLRKALQKKEFFLCYQPLTNLETG 744 Query: 518 ---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-P 573 G + ++ G+++P F+PL + L VL++ + G Sbjct: 745 AIYGSEALIRWNHPKLGLVSPGDFIPLAEETGLINEIGHWVLQTACRQTKEWHNKGLGSL 804 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 SVN+ Q +++++ K + PQ ++LE+TE N E+S+ I++L + Sbjct: 805 TVSVNVSVHQFQQPGFVHKVLQVLKETMLEPQFLVLELTESSMLRNMENSILVIQELQRN 864 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R+AIDDFGTGY++ LK L D +KID F+ ++ + + D IV +I + + Sbjct: 865 GIRVAIDDFGTGYSSLSYLKHLPIDALKIDRSFIDNLRSGSPDIAIVNAIITMGLGLHVK 924 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET +Q LL L + QG+ I RP Sbjct: 925 VVAEGVETAEQMRLLKDLKCHFAQGFFIHRPLGAE 959 >UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YKOW_BACSU Length = 800 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 120/748 (16%), Positives = 267/748 (35%), Gaps = 25/748 (3%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL---IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFI 58 + +LI I+++ F + + + + PL + + +++ L + + Sbjct: 45 LIGGSLIMGFGIWSMHFVGMMAVHMEMPMEYEFMPLMAAIGASVSGSFVSLYFVSRHILT 104 Query: 59 FGWRGVVPVLCGMFCTNLWNFHLS-FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 + V+ G ++ +S + ++ F V AI + + + L Sbjct: 105 YYRLLTGSVVLGASIASMHYIGMSAISRVMIIYEPILFTVSIIIAIAASFVSLKIFFDLA 164 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + + L I + + G + L +TF D + +++ + ++ Sbjct: 165 VKKHSEHLI--FYKGVSSIVMGIGISGMHYTGMLA-ATFHKDMAPPGSHMEVQTFHWSIF 221 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + ++F T ++ S H + ++ +++ + +L L ++ Sbjct: 222 VTLIIFCIQTLLLFSSHADRKFIKQSERIKDNEQRFQSLIVHNIDAIFILSLEGDIISSN 281 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 ++ F L V + + L + ++ L L Sbjct: 282 HAGEEMISKFGFSMHDWRNYTSLKVKRLFEQVKKDKQAMNSDSDLITEKGQFHLNITLIP 341 Query: 298 LISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA----LEQAPEQEAGK- 350 + + + + + + H A D LT LPN R L + +E Sbjct: 342 VEVNQELDSIYVICKDMTKQYKAEKEIHRMAHYDSLTDLPNRRHAISHLTKVLNREHSLH 401 Query: 351 ---SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 L ++ + ++ G + ++ + L ++ +N + +L G E +++L+ Sbjct: 402 YNTVVFFLDLNRFKVINDALGHNVGDQLLQFAAKRLSSVVPDNGFIARLGGDEFIIILTD 461 Query: 408 PET-EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 T G + + + + L + L+ + Sbjct: 462 ANTGTGEADVLARKIIQKFKKPFKIQDHTLVTSVSIGIAISPKDGTDGLELMKKADMAMY 521 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + + + + T ++ +R A++ +L+ QP + ++ G + Sbjct: 522 AAKERNKSK-YRYYSFSIGNKETVKLNQEMVLREAIENDRFVLHYQPQFSVKKQKMTGAE 580 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ + DG + P +F+ + + L +++ K ++N+ Sbjct: 581 ALIRLVTPDGQLRPPGEFIGVAEETGLIIDIGKWIIDEACKQARIWHDKGYDLSVAINIS 640 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 K++ I +Y + PQ + +E+TE N S + L + G RI+ID Sbjct: 641 ARQFQSKDLIPLIKDTLNKYQLPPQLLEVEVTESMTMDNLNHSKKVLSSLTELGIRISID 700 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ LK +KID F+ DI T+ I +I + SL V+AE VE Sbjct: 701 DFGTGHSSLSYLKDFPIHRLKIDKSFIDDIQTHPKSEQITGAIIAMGHQLSLQVIAEGVE 760 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ LL + G +LQG+ RP P Sbjct: 761 NAAQKQLLFEKGCDHLQGFFFSRPIPPE 788 >UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1H8_9RHOB Length = 944 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 95/437 (21%), Positives = 177/437 (40%), Gaps = 18/437 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQ---EAGKSFCCLRI 357 + + + R A D LT LPN +Q + CL + Sbjct: 494 VAISEDITERQEARDRLAFLARHDLLTQLPNRIEFRDQLDMLLNQQMVKGGEFAILCLDL 553 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + +R + L L+ + + +L G E ++ P ++ + Sbjct: 554 DEFKTVNDSLGHPIGDELLRQVAERLRKLIGRKDVVVRLGGDEFAILTGLPSRLKDVEEL 613 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + S+ + + +G + L Q ++ Sbjct: 614 AQSVIWEISQPFQITDHEIVIGVSIGITIARADGTAGDELFKQADLALYRAKEDGRN-TY 672 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 E + + L+ +RTA+ G+L LY QP + G++ ++ G Sbjct: 673 RFFETDMGTAVNDRRELITDLRTAVANGELELYFQPQYTLADDRISGFEALVRWNHPKRG 732 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 +++P F+PL L ++ VL + A P R +VNL P L Sbjct: 733 MVSPADFIPLAEDTGLISQLGEWVLMEACRIAAKWPD---HLRVAVNLSPRQLRGHAFGP 789 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 +I + + + LE+TE +++E + ++ Q G ++++DDFGTGY++ Sbjct: 790 VLIDALVQTGLKADRLELEVTESVLLTDSEDVLDSLHQAKSLGVKVSMDDFGTGYSSLSY 849 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+R D IKID FV+ + + IV+++ +LA +++ AE VET+Q +L ++ Sbjct: 850 LRRFPFDKIKIDQSFVRSMAYSDDSISIVKAVIELANNLNMTTTAEGVETRQLLDMLTEI 909 Query: 712 GVQYLQGYLIGRPQPLA 728 G QGY +GRP P+ Sbjct: 910 GCTEAQGYYLGRPMPVD 926 >UniRef50_C7RB28 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB28_KANKD Length = 861 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 94/448 (20%), Positives = 176/448 (39%), Gaps = 21/448 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKS 351 S ++ + ++ ++ A D LT LPN L + Sbjct: 406 SRLPAVVTVGVDVTETKQFEQQIQHMAQHDSLTGLPNRLLLNDRINQSLALSLRHHHNGA 465 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--- 408 + +D + ++ G M + + + L ++ + + +L G E ++ LS Sbjct: 466 LLFIDLDFFKNINDSLGHMTGDKLLIEVAKRLEDNVRSGDTVARLGGDEFIIQLSELSDV 525 Query: 409 --ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 E E + L ++ N L + + + ++ + ++ + Sbjct: 526 EAEAELDAITVAKKLIQTLTQEFQINGQSLHITASIGVLVYPRDADSHELIMQRADTAMY 585 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + A + + ++ L + + A+ + L QP + + + Sbjct: 586 HAKAKGRN-GYAVFKSDMEAVIMRRQTLESDLHRAIYNHEFFLLYQPQIDANTGKLLCVE 644 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNL 579 ++ GI++P +F+P+ + VLE + + + P SVNL Sbjct: 645 ALIRWNHPVEGIISPLEFIPIAEDNGTIVQIGNWVLEKACQQIKLWIKEYGYSPAVSVNL 704 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + L Q ++ I L ++ I + + LE+TE + S+ ++ L K G RI+I Sbjct: 705 SAIQLSQGDLVSTISSLLEQEKIPAELLELEVTETLILHEEKRSIDLLKSLKKLGIRISI 764 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK+L D +KID FV DI + I+++I ++K L V AE V Sbjct: 765 DDFGTGYSSLNHLKKLPLDKLKIDRTFVSDIPGDPDSETIIKTIIKMSKELGLEVTAEGV 824 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ETQ+Q L QGY RP Sbjct: 825 ETQEQLEFLKGERCPQFQGYYFDRPISP 852 >UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A3Q8W6_SHELP Length = 1094 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 96/459 (20%), Positives = 203/459 (44%), Gaps = 18/459 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA-------- 339 EY ++ V + + + + ++ D LT LPN + Sbjct: 620 EYLAITVVKDDKGRVVQHIGLFLDISNRKKYEQDIWYKSNYDALTNLPNRQLYTSRLSQM 679 Query: 340 LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 L+ A ++ + + +D ++++ YG + ++ L L+++++ + +L G Sbjct: 680 LQLAEQRCCSVAVLFIDLDRFKYINDIYGHAVGDELLQVAAARLEALLEQHDFVARLSGD 739 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++V+ + +G ++ + N L + + N +++ L Sbjct: 740 EFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINRNELLISASVGISCYPSNGTSVEVLTR 799 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 Q+ ++ ++ L ++R+A+ Q + L+ QPI + Sbjct: 800 NAETAMYQAKQDGRN-CFGYFSPDMNNNMLARITLEQSLRSAVLQHEFCLHYQPIVDTSS 858 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 EG + +L G++ PD+F+P+ + L V++ L+ L Sbjct: 859 GEGVALEALLRWRHPQRGLVPPDEFIPIAEETGLIEPIGEWVIQQALRDLRQCHSQGIMI 918 Query: 574 RFSVNLMPLTLLQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 ++N+ L + A + L ++Y ++PQ V +EITE ++ E S+ + + Sbjct: 919 NMAINVSGRQLAHGDPSHFACMLNGLLQKYDVAPQYVHIEITESILMADTELSLKALTAI 978 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G I +DDFGTGY++ LK+ +IKID FV +++ + DA ++++I + ++ Sbjct: 979 RHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDKSFVDNMLEDRADANLIKAIITMGQSL 1038 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +VAE VE++ Q++ L LG ++QGYL+ +P PL + Sbjct: 1039 DMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKPMPLKE 1077 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 92/438 (21%), Positives = 173/438 (39%), Gaps = 17/438 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + +++ QA D LT LPN R L + L + Sbjct: 424 VALFSDITKNKQNQEVIWRQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLFLDL 483 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ YG +M ++ LL ++E + + +L G E +++LSG + + +Q + Sbjct: 484 DRFKEVNDTYGHLMGDQLLQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDKDVVQDI 543 Query: 418 VNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + +N + + + + L + + Sbjct: 544 AQSILKKFDTPFQLDNDLTHVSVSIGITIYPEDGNAGEVLFKNADQAMYVAKNNGRNR-Y 602 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 + ++ L N + AL LY QPI + + +L G Sbjct: 603 SYFTASMQAHAQNRMRLSNDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQHPTRG 662 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIA 590 ++ PD F+PL + L V + + + S+N P+ + Sbjct: 663 MIPPDNFIPLAEETGLIVDIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNETHG 722 Query: 591 -GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I + Q++++EITE ES + G ++A+DDFGTGY++ Sbjct: 723 HEAWISFLLMNDLPRQSIVVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGTGYSSL 782 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+ D +KID +FV+++ N+ D + +I +A + V+AE +ET++Q+ LL Sbjct: 783 SYLKKFDIDYLKIDRIFVRNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQRELLQ 842 Query: 710 KLGVQYLQGYLIGRPQPL 727 ++G + QGYL P P Sbjct: 843 QIGCDFGQGYLFSPPLPA 860 >UniRef50_C3X4C3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4C3_OXAFO Length = 905 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 96/470 (20%), Positives = 179/470 (38%), Gaps = 15/470 (3%) Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + + +N + +E + I+ + + + + ++E+L D LT Sbjct: 429 MAAFEKNRQEKIEPTHLTVKIVRDMDDRIISYIGTLLDISQNEFLEDHTRYMIEHDFLTG 488 Query: 334 LPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN L Q + L +D + ++ G M ++ + L Sbjct: 489 LPNRILLLDRLGQTLIAAERNRRRAAVMFLDLDRFKHINDTLGHAMGDRLLQQVAFRLTK 548 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWG 442 +++N+ + + G E +++L+ + + N + S+ N + + Sbjct: 549 CVRKNDTVSRQGGDEFVILLNDIGNADDVALVANNIMHALSQNYQIENYEMSITPSIGIA 608 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + + + LL + A ++ ++ L N ++ AL Sbjct: 609 LYPEDGKDIDTLLKNADTAMYHAKEGGRN-AYQFFNAQMNLHLVERTRLENDLKAALQNS 667 Query: 503 DLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 L QPI + G + L + GI+ P +FL + L V+ + Sbjct: 668 GFFLEYQPIVDTQSGHMTGVEAFLRWNHPEFGILMPPRFLGVAEDTGLIGPIGEWVIRTA 727 Query: 560 LKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 K S+NL + L QKN+ I K ++P + L+ITE N Sbjct: 728 CKQAGEWRDQGFPKTVSINLSSIQLKQKNLLSTIRNALKENGLAPDFLELQITEGSIMEN 787 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 ++ + +L G RI +D+FG G ++ LK+ IKID VF+ + T + DA + Sbjct: 788 VKTVSDLLHELRAMGIRIVLDNFGNGCSSISHLKKAPIGKIKIDPVFIHALGTGSEDADV 847 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I +AK L V A VET Q L ++G QGYL+ + Sbjct: 848 AGAIVAMAKNLRLKVSAGGVETDLQALRLKEIGCDEYQGYLVSPSLSAGE 897 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 90/442 (20%), Positives = 168/442 (38%), Gaps = 17/442 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCL 355 + + + + QA D LT LPN+R EQE + L Sbjct: 458 HRIALFTDISQKKESEELIWRQANFDHLTGLPNWRMFHDRLEQEIKKSRRVELPLAVVFL 517 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ G ++ L ++E++ + +L G E L+L + ++ Sbjct: 518 DLDHFKEVNDTMGHATGDLLLKEAALRLSSCVRESDTVARLGGDEFALLLGELSDQDSIE 577 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S N + + + ++ LL + Sbjct: 578 RVNECILNKFSAPFQLGNELAYISVSIGVTIYPSDATEIEALLRNADQAMYAAKNSGRNR 637 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + + + ++ L N + AL Q L QPI + ++ + Sbjct: 638 S-CYYTQAMQSVAQNRMSLSNDLHKALAQDQFRLVYQPIVELETGSIHKAEALIRWQHPN 696 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKN 588 G+++P F+P+ Q L + V + K + S+N P+ + Sbjct: 697 RGLVSPADFIPIAEQSGLIIQIGDWVFRQAANQVKHWRGAYGKDIQISINKSPVQFKSDS 756 Query: 589 IAGRI-IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 K +S +EITE +++ + + G ++A+DDFGTGY+ Sbjct: 757 NTHLAWFEHLKELDLSGGCFAIEITESLLMDASDTIVSKLMAFGNIGMQVALDDFGTGYS 816 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ D IKID FV+++ ++ D + ++ +A + V+AE VET +Q+ L Sbjct: 817 SLSYLKKFDIDYIKIDQSFVRNLAPDSSDLALCEAMIMMAHKLGIKVIAEGVETSEQRDL 876 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G Y QGYL RP D Sbjct: 877 LRTAGCDYGQGYLFSRPLSTED 898 >UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter RepID=B8H1B9_CAUCN Length = 842 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 130/715 (18%), Positives = 236/715 (33%), Gaps = 42/715 (5%) Query: 45 AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAIL 104 W L + ++L + GW G + LQ A++ +L Sbjct: 108 IWAALVISYALLGLRGWVSAQRRKTGKAAVSARGVRRVVLQAALLG--------LLWGVL 159 Query: 105 RWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF 164 V + + + ++ + S + Sbjct: 160 PVLTFRLGDTSAMPMMVASVIAGMIGCGGFALLTLPAAALAYSTPMVLGSLYMLGTSGDP 219 Query: 165 TVVDLLSLFTAVLIYNML-FYYLTRMIVSPHFAQILWRRDIAP-----SLGKEKRAFTLS 218 + L L ++ R+ A + S +E + L Sbjct: 220 ILYALGGLLVFCYAVVIVSCLSHARIFAERLVAADELEKQKQVVSLLLSDFEEGASDWLW 279 Query: 219 WLAALSVL------LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 + A L + ++ + + + G L Sbjct: 280 EVDAAGRLTYVSDRMAAAAGVDKDALLGQPMSDLCGAAEAPGGPVAALSALFAEQKTFRD 339 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTD 329 +++ G + A + + + ++ R A D Sbjct: 340 VVVSITVADDAGRPATHWWALSAKPVHDLDGLFVGFRGVGADITQAREDQERISHLAHYD 399 Query: 330 PLTLLPNFRALEQAP--------EQEAGK-SFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 LT LPN +L Q + + CL +D+ + ++ G + + + Sbjct: 400 VLTQLPNRLSLLQNLGKAWMDHGRDKTSGCAVLCLDLDHFKGVNDSLGHPVGDALLMQVA 459 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 L + E + +L G E +V + L + + S + +G Sbjct: 460 SRLRSCVGETGMVARLGGDEFAVVCAPSPGHEALSALSQSIVETLSAPYDILGHNVLIGA 519 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + LL ++ A E + ++ L +R Sbjct: 520 SVGIAVAPFDADDPDGLLKNADLALYRAKGDGRG-AYRFFETAMDVWAQERRALEMDLRE 578 Query: 498 ALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL + +L L+ QP+ + E G++ +L G++ P F+ Q+ L R Sbjct: 579 ALARDELKLFFQPLIGRRDNETTGFEALLRWQHPTRGLVPPSDFIECAEQWGLIGRIGEW 638 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 VL + AT P +VNL P ++ ++ K ++P + LEITE Sbjct: 639 VLNEACRTAATWPS---HLTVAVNLSPNQFASGDLVDQVRAALKASGLAPARLELEITEG 695 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 ++ ++ + L G +IA+DDFGTGY++ L R D IKID FV ++ N Sbjct: 696 LLLHDSAKTLEQLAALKALGVKIAMDDFGTGYSSLAYLWRFPFDKIKIDRSFVAEMQDNV 755 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A I+R+I L + +L V AE VETQ Q LL ++ QG+L GRP P+ D Sbjct: 756 AIADILRTIALLGQTLNLEVTAEGVETQAQARLLAEMRCDQFQGFLFGRPMPVGD 810 >UniRef50_Q7NXK6 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NXK6_CHRVO Length = 816 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 107/526 (20%), Positives = 206/526 (39%), Gaps = 18/526 (3%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 + T +++ G V + G + + L + + N Sbjct: 286 ITFLNPIAEDMTGWQSREALGEPVEKIMPLRESSQGHAMFNPIRLVLSEQRSVGMAMNCA 345 Query: 281 FLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + L + ++ + L + + + + + A D LT LPN Sbjct: 346 LQRRDGQLLELEDSASPILDHAGKLTGAIIVFHDVSEARAMAVKMTHLAHHDALTNLPNR 405 Query: 338 RALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L+ +Q ++ L ID+ + ++ G + ++ + R L ++ Sbjct: 406 MLLQDRTQQALQQAAHSGDRLGLYILDIDHFKVINDSMGHSVGDQLLQRVARRLQAALRP 465 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 + + + G E ++++ G + M + + S + D+ G + Sbjct: 466 CDTVSRQGGDEFIILVPGLGGIEQAGAMADKMLKAISEPYLLDGNRYDLSGSIGVGIYPD 525 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + + L ++ + + L IR +QG L+ Sbjct: 526 DSKNQEELYRHADAAMYRAKQEGRNR-YRFFSSEIEEALLTRQALERHIRMGAEQGGFLV 584 Query: 507 YAQPIRNKEGEG---YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QP + G G + +L I++P F+PL + L L VL Sbjct: 585 YYQPKVDAGGGGVVGLEALLRWRNDKDEIVSPSHFIPLAEETGLIVPLGLFVLRQACLDG 644 Query: 564 ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + R +VN+ + +++ + + R+ K + + + LEITE + E + Sbjct: 645 KRWLDAGRRLRIAVNVSAVQVMESDFCDAVRRVLKETGLPTELLELEITEGVLAQDVERT 704 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 M + +L G IAIDDFGTGY++ LK D++KID F+ D++ + A IV +I Sbjct: 705 MSVLAELKSLGVSIAIDDFGTGYSSLSYLKLFPLDVLKIDQSFIHDMLDDRHSAAIVAAI 764 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A+ L +VAE VE ++Q L +LG + +QG+L GRP+P A+ Sbjct: 765 ASMAQGMGLRLVAEGVEREEQARELLRLGCRIMQGFLYGRPEPAAE 810 >UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Chloroflexus RepID=B8G9I9_CHLAD Length = 1101 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 102/441 (23%), Positives = 178/441 (40%), Gaps = 20/441 (4%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDN 359 + + LN + + Q D LT LPN L+ A E+ + + +D Sbjct: 646 LFNLIADHANLNAQLNYQVRYDTLTGLPNRNLLQERIDLALRDARERRHIVALLFIDLDG 705 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ + + + + L ++ G E LL++ Sbjct: 706 FKQVNDSLGHPIGDRFLKHVSQAFAACARPQDTLGRMGGDEFLLLMPDLPDARLADIAAQ 765 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + L + F + + LL ++ L Sbjct: 766 RLLDALQTPFLHDGHELRLTASIGISLFPRDGVDVVTLLKNADSAMHRAKELKRSGFLH- 824 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIM 533 S + ++ L +R AL++ +L +Y QP + G + ++ G + Sbjct: 825 YRPEHSRRAHTRLALEAQLRRALERHELAVYYQPQYDLVSEGITGVEALVRWHHPQRGPI 884 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGR 592 P +F+P+ + +L VL + R SVN+ LL+ Sbjct: 885 APGEFVPIAEESDLIIEIGSWVLREACRQAMAWQQAGYPLLRISVNVSARQLLRPEFVAE 944 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + Q + LEITE + + I+QL G RIA+DDFGTGY++ L Sbjct: 945 VAAVLHATGLPAQYLELEITEGVMLDDPIYAARQIDQLRHMGVRIALDDFGTGYSSLAYL 1004 Query: 653 KRLQADIIKIDGVFVKDIVTN----TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 ++L+ D +KID FV+ I T ++R+I +LA + L+VVAE VET +Q+A L Sbjct: 1005 RQLRLDALKIDQAFVRAIDEQQNVVTNSRALLRAIINLAHSLGLAVVAEGVETDEQRAAL 1064 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +G LQGYLI +P P + Sbjct: 1065 LSMGCDVLQGYLISQPLPADE 1085 >UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=B1M4V3_METRJ Length = 777 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 121/733 (16%), Positives = 236/733 (32%), Gaps = 74/733 (10%) Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 R V + +L + + ++ A++ Q RWR V Sbjct: 34 RLVPFTILVSLSVVQVIVYLFWNPANRAYLAGLETLILPLAVVSLQQCWRWRSRPKPLQV 93 Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 ++ + + A +I ++ + AVL Sbjct: 94 PSSFVQGVVLAAQAYGFLLASIPVMLFSGADAHGRLLIASSIAGLIAT-GMSAAVLPRVA 152 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCTPYENDF-- 238 + Y ++ S + + LL + + + Sbjct: 153 IGYSGLIILGSFIALATTGEAFYIYVAVLLFFYAIFICFTILHLSRLLTMRVIAQIELER 212 Query: 239 ---IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 L+ F + + + + + + ++ L G+ E L + Sbjct: 213 QQEFTHLLLNEFEESASDWLWETDADLRLQHVSPRLIEVAGSSERQLMGLPLERLLLPPV 272 Query: 296 AVLISFSV--------------------------------------------CLLYMVRI 311 A S S + Sbjct: 273 APPRSHSSTTLWSCIAERRAFRNLHLQLDIAGERRTWCLSGKPTFDRAGAFSGYRGVGSD 332 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQ-------APEQEAGKSFCCLRIDNLEFMS 364 R AL D LT LPN Q Q + L +D + ++ Sbjct: 333 VTEKRRSEERLSYLALHDSLTDLPNRVLFHQLQEAARERLAQGDRFAVLALDLDEFKSVN 392 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEK-LYQLPGSELLLVLSG--PETEGRLQHMVNIL 421 +G ++S+ L + ++ L +L G E ++ +G ++ + N + Sbjct: 393 DTFGHAAGDKLLKSVAERLRSF-EASDVQLARLAGDEFAVLATGRSARDLHAIEALANGI 451 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + L + + Q ++ + + + E Sbjct: 452 VEALASPFTIDGIRLTVSVSIGIAIAPQDG--CQEIMRRADLALYRMKSEGRN-GYRFYE 508 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTP 535 + + + L +R ALD+ + +LY QPI G++ ++ G ++P Sbjct: 509 AEMDERIEARRALTADLRGALDRDEFVLYFQPIVAAKECRVRGFEALIRWKHPVRGFVSP 568 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+PL + + +L + A P R +VNL P ++ + Sbjct: 569 GEFIPLAEETGVIIPLGEWILREACRIAAGWPG---DVRIAVNLSPRQFRHSDLTQLVRS 625 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + ++ + LE+TE + + +L + G R+++DDFGTGY++ L+R+ Sbjct: 626 ALRTSGLAAARLELEVTESVFLEATPAINATLSKLREMGVRLSLDDFGTGYSSLSYLRRI 685 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IKID FV+D+ A IV +I D+A + +++ AE VET Q+A L + G Sbjct: 686 AFDKIKIDQSFVRDLPQERGAAAIVSAIIDMATSLDMTITAEGVETDAQRACLLEQGCHE 745 Query: 716 LQGYLIGRPQPLA 728 QGYL +P P Sbjct: 746 FQGYLFSKPLPAE 758 >UniRef50_A0YED8 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YED8_9GAMM Length = 642 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 99/465 (21%), Positives = 183/465 (39%), Gaps = 21/465 (4%) Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 G + +L I L ++ + A DPLT LPN R Sbjct: 171 RRADGTQLWVNLTGIYTQSEDNKPELQIVLNNVTDTHNNIDEIRRLAFFDPLTGLPNRRL 230 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + L +DN + ++ G + ++ + L M+E++ Sbjct: 231 LFDRLAHAVTTSARTNLYGAVMLLDLDNFKILNDSMGHGIGDLLLQKVSLRLKMCMREDD 290 Query: 392 KLYQLPGSELLLVLSGPE-----TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 L +L G E +++L + + + + + + Sbjct: 291 TLARLGGDEFVILLENLSSDEKKAAAQAEVVTQKILVSLVEDYNLQGFVHNSTASIGIVM 350 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F G+ + LL Q+ A + ++ ++ L N +R L Q + Sbjct: 351 FKGDDLSFGDLLKNADVAMYQAKAASRN-TFRFFDPVMQAIAERRTQLENALRQGLVQEE 409 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +L Q N + G + ++ + + ++ +F+ L + ++ VLE+ Sbjct: 410 FVLNYQIQTNSNGKTTGVESLVRWINPEYATVSTGEFIALAEETDIIFLLGQWVLETACA 469 Query: 562 WLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 LA SVN+ L + + G + ++ +P +ILE+TE + Sbjct: 470 QLAAWSQHPTMSSWSMSVNVSALQFKKSSFVGNVETALEKSDANPNLLILELTESMLVDD 529 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 S++ ++++ G R ++DDFGTG+++ LKRL D +KID FV D++ + DA I Sbjct: 530 VPSTIEKMKRIKSLGVRFSLDDFGTGFSSLAYLKRLPLDQLKIDQSFVHDLIVGSDDAAI 589 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +I L + + V+AE VET Q L ++G + QGY GRP Sbjct: 590 CETIITLGISLGICVIAEGVETADQYECLMEMGCKSFQGYYFGRP 634 >UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89WT2_BRAJA Length = 833 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 127/763 (16%), Positives = 238/763 (31%), Gaps = 50/763 (6%) Query: 12 KIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCG 70 I+ F + + + + S + +++ WR Sbjct: 60 GIWATHFVAMLAYEPGVPTNYGLVLTVLSLAAAMILTSGGFGVAVNNSGQWRAAAGGGII 119 Query: 71 MFCTNLWNF----------HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 ++ +++ V++ +VL A+ + Sbjct: 120 GAGIASMHYIGMWALEVPGRVTWSPGLVLISIGLGMVLGYAALAVALGHKDKWGTFAAAL 179 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + T +G + D TF A A + L F VL Sbjct: 180 LLTLAIVSHHFTAMGAVQIVPDPTLASDTLSLSPTFLAVAIAGVALSVLGMSFVGVLADR 239 Query: 181 MLFYYLTR---MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---CTPY 234 L +R +I A+ ++ R T ++ + Sbjct: 240 RLATRTSRFEQIISELSLARQQVEDSQQEIQEQKLRLDTAINNMVEALCMFDAEKRLVVC 299 Query: 235 ENDFIAGY-LVPVFFIIFTLGVGKLRYPFLNLT-----------WAVSTLCLLNYNQNFL 282 + Y L P T +R+ + +S L L ++ Sbjct: 300 NERYARLYQLPPELLRTGTPHADIIRHRVVTGILKSDTSEGAAEQFLSKLAALPFDAVSS 359 Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + E + + + A D LT LPN L + Sbjct: 360 RIDEFTDGRLICVTRQPMAGGGWVATHLDVTEQRRSEAKIAHMAQHDALTDLPNRVLLRE 419 Query: 343 APEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 E + L +D + ++ G +R++ L E + Sbjct: 420 RMEHAIAVTRNGGLDLAVLMLDLDRFKEVNDTLGHPTGDSLLRAVATRLRECTTETALIA 479 Query: 395 QLPGSELLLV----LSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E ++ E +++ L + + +G + Sbjct: 480 RLGGDEFAVIDYVTNPAVEAAALAENIRKALCE-PFDLGDHRVTVGTSIGIAIAPRDGND 538 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 ++ + A E + + L +R A+ L+ QP Sbjct: 539 SDVIMKSADLALYSAK-SGGRGAFRFFEPELDELMHARRNLERDMRDAIVGRQFELHYQP 597 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + G++ +L G++ P +F+PL + L VL + A P Sbjct: 598 FVSPATGKVNGFEALLRWHHPQQGLVMPSEFIPLAEETGLIVPLGEWVLRAACAEAAKWP 657 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R +VNL P K + +I ++P + LE+TE ++E+ + Sbjct: 658 ---PHVRIAVNLSPAQFRSKELVPVVIGALASSGVAPHRLELEVTETVIMHDSEAVFAVL 714 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT-NTLDAMIVRSITDL 686 QL + G RIA+DDFGTGY++ L++ D IKID FV ++ + + R++ Sbjct: 715 GQLRELGVRIALDDFGTGYSSLSFLQKFPFDKIKIDRSFVNELSSARAEARHLARAVVRF 774 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A + + AE VET++Q +L + G QGY RP P +D Sbjct: 775 AVSLGKTTTAEGVETKEQLDILCEEGCLETQGYYFSRPMPASD 817 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 99/455 (21%), Positives = 177/455 (38%), Gaps = 16/455 (3%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------ 342 ++ F + V + + + A D LT LPN Sbjct: 229 HARNFPVRDEEGNIVSVGGVATDITSLLADQWKSPYFAHFDALTALPNQLMFYDQVKRMI 288 Query: 343 --APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + ++ S + ID +++ G +R + L ++E++ L +L Sbjct: 289 ALSKRKDLPLSLMVVDIDRFRQLNQTLGHASGDELLRQVAGRLSGSLRESDILGRLGTDV 348 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++L + + + + + G + + + L+ Sbjct: 349 FGILLPDVADTHQASIVARRIIDTMIMPVRVAGQDVFATAGVGIVFYPQDGNDVHELVTN 408 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NK 514 + + + ++ L +R A + + +LY QP + Sbjct: 409 AGIAGRHAKNLGRN-SYQYYFPGMHEGARDRMFLEIDLRHATLRNEFVLYYQPKASCADG 467 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-P 573 G + +L + GI++PD+F+PL+ + L + VLE + P Sbjct: 468 RITGVEALLRWQHPERGIVSPDQFIPLLEETGLIVQVGRWVLEEACRQAVEWQAAGLNIP 527 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 SVNL L + + + ++ ++ + LEITE NA+ ++ + L K Sbjct: 528 SVSVNLSARQLQAETLLTDVAATLEKTGLNAACLDLEITESMLMDNADMAIQTLSALKKM 587 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G I++DDFGTGY++ LKR D IK+D FV+DI ++ DA I R++ +A L Sbjct: 588 GVTISLDDFGTGYSSLAYLKRFPLDAIKVDRSFVQDIAADSDDASITRAVITMAHHLKLK 647 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET +Q ALL +QGY RP P + Sbjct: 648 VVAEGVETPEQLALLISHQCDVIQGYFFSRPMPAS 682 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 89/466 (19%), Positives = 178/466 (38%), Gaps = 23/466 (4%) Query: 284 GVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 EY ++ + + + + + + QA D LT LPN Sbjct: 602 KNGKEYPEWLSISTIYDDYGNVFRRIALFSDITEKKKKDALILRQAKYDSLTNLPNRIMF 661 Query: 341 EQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 EQ + + +DN + ++ G + + + + ++E + Sbjct: 662 IDRLEQEIKVSHRKNQKFALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVDT 721 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++LS ++ + + S + + + + Sbjct: 722 VARLGGDEFTILLSDIADIHNVESICQKVLQTLSEPFFISKMYTYISASLGVTIYPNDAS 781 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL + + + + L+N +R A+ L ++ Q Sbjct: 782 STLELLKNADQAMYLAKNLGRNR-FCYFTASMQEEALDHLELINDLRKAISLNQLEVFYQ 840 Query: 510 PIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 PI + + +L G+++P +F+PL + L V + ++ + T Sbjct: 841 PIVELQTGVIRKAEALLRWKHPVRGMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHINTC 900 Query: 567 PCD-KKGPRFSVNLMPLTLLQKNIAGRII--RLFKRYHISPQAVILEITEEQAFSNAESS 623 + SVN P+ + ++ + + +++EITE +N S+ Sbjct: 901 KDQLGLDIQISVNKSPVQFRES--IDQLDWLAYLAENQLPGENIVIEITEGLLMNNNTST 958 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 M + + G +++DDFGTGY++ LK+ D +KID F ++I + D ++ +I Sbjct: 959 MERLSKFRSAGIGLSMDDFGTGYSSLSYLKKFALDYLKIDQSFTRNIAPGSEDMILSEAI 1018 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A+ L V+AE +ET++Q LL G Y QGY RP P D Sbjct: 1019 ITMAQKLGLKVIAEGIETKEQMELLIGAGCDYGQGYYFSRPIPAED 1064 >UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A017_PELCD Length = 847 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 99/437 (22%), Positives = 172/437 (39%), Gaps = 16/437 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLR 356 ++ +VR A TD LT LPN E +A + + L Sbjct: 402 VMGIVRDITELVEQRELAQHLAFTDMLTGLPNRALFEKRFKEAAAEAKSTDCPFALLMLD 461 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D+ + ++ G +R + L + E + + ++ G E ++L+ Sbjct: 462 LDHFKDVNDSLGHNCGDELLRQVTARLSHCVNECDTIARMGGDEFAILLAESRGSDEAGQ 521 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + +++ S + + L + F + L L + Sbjct: 522 VADLILSTLAQPFFIESQELFISGSIGIAFFPHDSANLDELFTYADTAMYSAKHKGRN-N 580 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 ++ ++ + ++ L ++R A +L LY QP + G + +L Sbjct: 581 FQCYDQELTRHVSAKLSLGASLRYACVNHELQLYYQPKVQLKDGRVVGVEALLRWWHPVL 640 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNI 589 G++TPD+F+ + + L VL++ + + + +VNL LQ ++ Sbjct: 641 GMLTPDRFISIAEETGLIVEIGEWVLKTACQAAVDFNRNATAPFKVAVNLSCRQFLQNDL 700 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 A I + K + + EITE + +E L G IAIDDFGTGY+ Sbjct: 701 AATIEAILKTTGCRGEWLECEITESLMIEDNPQVAKTLEALRSLGITIAIDDFGTGYSAL 760 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L R D++KID F+ I T+ +V+ L + +VAE VET + A L Sbjct: 761 NYLSRFPIDVLKIDRSFINHIDTDPCKVGLVKVFIALGTNLEMQIVAEGVETVSESASLQ 820 Query: 710 KLGVQYLQGYLIGRPQP 726 KLG QGYL G+PQP Sbjct: 821 KLGCGLAQGYLFGKPQP 837 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 115/638 (18%), Positives = 216/638 (33%), Gaps = 54/638 (8%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI--------- 190 M L + L S + + + V + L L R + Sbjct: 1 MSLYVTTPRPRLGHSMVRANMAGAGAALTIAGFLLIVFQFIALHAALVRDVHVQARIVGA 60 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 S RR +LG + + +L S L L D + Sbjct: 61 NSVAALLFNDRRAAEETLGALEASPSLRAAGIFSALRKPLALYQHGDAAPVRAPDAAMLR 120 Query: 251 FTLGVGKLRYPFLNLTWAVSTLC---LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 + + + + ++ + + L Y++ + + + + L Sbjct: 121 ESAVSTLTTLEVVEPVESERRVIGYVVVRSSLSELYMQLLGYAVLTVSVGIGAMGLAYLV 180 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------QEAGKSFCCLRIDNL 360 + R+ A D +T LPN A + + Q L +DN Sbjct: 181 IARMRRAVLQAEAHLDYLAHIDSVTELPNRHAFNERLQVSLKRAGQTGAVGLLLLDLDNF 240 Query: 361 EFMSRHYGLMMRVHCIRSICRTL-----LPLMQENEKLYQLPGSELLLVLS--------G 407 + ++ G +R + R L ++ L ++ G E ++ Sbjct: 241 KVVNDTLGHNNGDRLLRQVARRLNDVIEQANLRA--VLCRIGGDEFAVIAELSGRAQIAE 298 Query: 408 PETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 E + + + + + + + + +Q L Sbjct: 299 TEAATLADGLAKRILAALGAPFSLDLHQIYVTASVGVSLYPHDARDVQVLTRNADTAMYH 358 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE------- 517 + H A S + Q +++ + +R ALD+ +LLL QP + Sbjct: 359 AKNHGKNAA-ASFTSEMDQQARRRLRVEADLRRALDREELLLAYQPQVRLSTDDAHDAVI 417 Query: 518 ------GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDK 570 G + ++ + G++ P +F+ + + L L VL + + D Sbjct: 418 SRANVYGVEALVRWRHPEIGLIGPGEFIAVAEETGLIVPLGLWVLRTACQQAVRWMREDG 477 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R +VNL + ++ + + + P + LEITE + E+++ +E L Sbjct: 478 VTLRVAVNLSARQTRDPALVENVMDVLRETGMPPHQLELEITESVLMEDIEANIALLESL 537 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 H G ++IDDFGTGY++ L+R +KID FV+ + + I ++ +A + Sbjct: 538 HAAGISLSIDDFGTGYSSLAYLQRFPIQKLKIDRSFVQRMPGDGE--AIAGAVIAMAHSL 595 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VVAE VE +Q ALL G QGYL RPQ Sbjct: 596 RMQVVAEGVEDPEQLALLRDAGCDLGQGYLFSRPQQAD 633 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 121/600 (20%), Positives = 223/600 (37%), Gaps = 40/600 (6%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG--------KEKRAFTLS 218 V L A I R V H +R + + E++ L+ Sbjct: 239 VQGFGLGAADYITKPFDIDEVRARVRTHIELSRLQRCLEELVAQRTALLEKSEEKYRILA 298 Query: 219 WLAA-----LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 + ++ L ++GY FF L + +P WA Sbjct: 299 EYSPNWEYWVAPDGSHLYVSPACGDVSGYSPADFFADPALMASII-HPDDRTQWAAQQAR 357 Query: 274 LLNYNQ-----NFLQGVETEYSLAFILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQ 325 + E L ++ + S + LL + + ++ Sbjct: 358 AVPGEASATVLRIRTRDGGERWLEHVVKPVFSPAGQLLGLRGSYGDITQRRQAEQQLDYV 417 Query: 326 ALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIR 377 D LT LPN + +Q K+ + +D + ++ G + Sbjct: 418 THRDALTGLPNRALFTEFLDQAVQKAAHSRGEFSLLFINLDGFKTINESLGRSAGDQLLI 477 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLS----GPETEGRLQHMVNILNSRQIHWNNTGL 433 + R L L+ + + ++ G E +++ G + Q ++N L S Sbjct: 478 EVARRLRELLPGVDAVARVGGDEFNVIVEHDVAGLGIDLVAQRIINAL-SHSYQLGAQSA 536 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 +G ++ + + LL ++ A + L ++ + +++ L Sbjct: 537 YIGACIGIAQYPADGPAAESLLNSADAALHRAKAQGRNV-LRFFSPELTIRARERLSLEA 595 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R AL QG+L L+ QP + G + +L G + P F+PL + L Sbjct: 596 DLRRALQQGELALHYQPQVDLRSGRIVGVEALLRWRHPQRGWIAPGAFIPLAEECGLIIE 655 Query: 551 FDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + + + PR +VN+ + + + + R I+P + L Sbjct: 656 LGDWVLRAACEQIRHWSDAGVAPRQTAVNISAVQISSGGLLDTVRRTLAATGIAPDRLEL 715 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE E S + L G +++IDDFGTGY++ L++L+ +KID FV++ Sbjct: 716 EITESFVMFERERSFKLLADLRALGVQLSIDDFGTGYSSLAYLQQLEVHKLKIDISFVRN 775 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + N +A IV+++ + + L V+AE VE +Q A L L +QGYL+ +P P+ D Sbjct: 776 MTRNRGNASIVKAVIAMGHSLGLEVIAEGVEEIEQAAHLLALQCDVMQGYLVSKPLPVDD 835 >UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ15_9GAMM Length = 594 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 90/439 (20%), Positives = 174/439 (39%), Gaps = 16/439 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 ++ + + + QA D LT LPN + + Sbjct: 141 MVGSIGDITEQKEYQDKLLHQATYDHLTGLPNRALALDRLSVAISRSRRNKTSVGLLFVD 200 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +DN + ++ G + ++ I L +E + + +L G E L++L ++ +++ Sbjct: 201 LDNFKKINDTLGHEVGDLHLKEISNRLGYCFREEDTIARLGGDEFLVILPDLDSPKQVEE 260 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + + N + + LL Q+ A Sbjct: 261 VCERILATAMQPVTINGYEFSTSASIGVTIYPDDGYEPSGLLRNADAAMYQAKAQGKD-T 319 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + +T ++ + + +R AL + L L+ Q I + + G + +L + Sbjct: 320 FCFFTPEMDQETVRKFTMESYLRQALSKDQLSLHYQSIVSASSGDVVGAEALLRWHCPEY 379 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNI 589 G + PD+F+PL + L VLE+ A + +VN+ +I Sbjct: 380 GQVPPDQFIPLAEESGLIVTIGDWVLETACLQAAEWMATACVPFKIAVNVSYPQFRDGHI 439 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + ++ K+ + Q + LE+TE + +++L G +++IDDFGTG++ Sbjct: 440 VSTVEKVLKKSGLPAQCLELELTERLLMEDERGCAEALKKLSAMGVQLSIDDFGTGFSAL 499 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+R + +KID FV ++ + ++ +I +A A + VV E VET+QQ L Sbjct: 500 NYLQRFPVNTLKIDRSFVAELDCSKESPALISAIIQMAHALGIEVVGEGVETRQQVNFLT 559 Query: 710 KLGVQYLQGYLIGRPQPLA 728 YLQGY RP P Sbjct: 560 LQTCDYLQGYHFARPVPAD 578 >UniRef50_D1U433 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U433_9DELT Length = 849 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 105/598 (17%), Positives = 214/598 (35%), Gaps = 35/598 (5%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS----- 218 T++ + L + + ++R + R + E+R T++ Sbjct: 201 LTILFVSILLIVAGLEFYVLRQISRSAREKAKIRQQRERLLEALRTGEERYRTIADFAYD 260 Query: 219 ---WLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTL 272 WL +L C+P F ++ + V + R + ++ Sbjct: 261 WEIWLGTEGGVL--YCSPACERISGHPPERYFEQPELLREIIVSEDRDAWDKYLLFINNE 318 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTD 329 + + + L + + + R + + + QAL D Sbjct: 319 VGGSLDFRIVTRSGQTRWLCVAGRAVSGIGMKPLGIRCSFRDITDRKEMEEQLRHQALHD 378 Query: 330 PLTLLPNFRALEQA---------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 PLT L N + + L +D + ++ G + Sbjct: 379 PLTELANRTLCLDRVGQAMRRAGRRENYYFALVFLDLDRFKVINDSLGHRFGDLVLMETA 438 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 L ++ + + + G E +L+L + G +V + ++ + + Sbjct: 439 NRLAQHVRTLDTVSRFGGDEFVLLLDELASPGEAIRIVKRIRDALAKPFIFTGHEVQTTA 498 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 +L + + Q+ + Q+ + N +R Sbjct: 499 SFGIVLSPIPDIRASDVLQRANIAMHQAKEAGRNR-FKVFTTRMLESAVDQLTMENDMRR 557 Query: 498 ALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 L+ G+ + QPI + + G++ + + G + P +F+P+ + + Sbjct: 558 GLESGEFHVQYQPIMDLDGSDIMGFEALARWDHPERGPIPPAEFIPMAEESGTIIKLGEW 617 Query: 555 VLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL L LA SVNL + + +I + + P+ + LEI Sbjct: 618 VLRESLLTLARWRAATPGAQDIFMSVNLSSKQFARMELDKLVIDALRAADLPPEVLKLEI 677 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + ++++ +++L K G R +IDDFGTGY++ +L++L D +K+D F+ + Sbjct: 678 TETALMEHPDAAINVLKRLRKIGVRFSIDDFGTGYSSLSQLQQLPVDTLKVDRSFISRMK 737 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ + IVR++ LA + L VVAE VE Q L +L + +QG+ RP D Sbjct: 738 SDPENMEIVRAVIALAHSLGLDVVAEGVEDAGQLCSLMELKCESVQGFYFHRPLSPTD 795 >UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXA0_LEPCP Length = 771 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 117/674 (17%), Positives = 237/674 (35%), Gaps = 32/674 (4%) Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM 140 L+ L + + + + + + G L + + Sbjct: 66 LTALIAHAGVFATLWGAVPGWMLAQANAGQHAL--LAGSLTGMLCIGGVTLAAVPAAAYA 123 Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH-FAQIL 199 YL G + A V ++ ++ R V A+ Sbjct: 124 YLGGLSLSLIVS-QFMQPSAQLGAGAVQWAGCAAVMVGGVLMMSRTVRARVQAEMQAEHQ 182 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL------ 253 + ++ L W L + + + + Sbjct: 183 GQLIGLLLRDFGEQGSDLLWQIDERGCLSQVSRRLADALGRPLAELQGRPLLEVLTELQQ 242 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNF-LQGVETEYSLAFILAVL---ISFSVCLLYMV 309 G+ + + + ++ + L ++ + Sbjct: 243 GLSDIDRDATQMLQTCLIEGQPFRDVLMPMRVKGQPRWWSLTAKPLVNERGVAMGWRGVA 302 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQAPEQEAG----KSFCCLRIDNLE 361 R ++ +RR A D LT L N LE A +Q + CL +D+ + Sbjct: 303 RDVTQARMADRRMAWLAHFDTLTGLTNRAHFRVLLEAALQQARSPEQGGAVMCLDLDHFK 362 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + R L + + + +L G E ++L ++ + Sbjct: 363 TVNDTLGHPTGDALLVEVARRLKAAVGPGDVVGRLGGDEFAVLLRNAADVQQISATAQRI 422 Query: 422 NS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + RF + ++ L+ + A ++ Sbjct: 423 LDALREPCAALGAQVPVRLSIGIARFAQDGASVDELMQHADLALYDAKAS-APGSMKFFA 481 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTP 535 + Q ++++L +R A+D+ L L+ QP + + G++ +L + G + P Sbjct: 482 PRMGEQVRRRLVLERDLREAIDKQQLSLHYQPKVDLQTWEVTGFEALLRWRHPEHGNIPP 541 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ L VL + A P + ++N+ P+ ++ +N+ + R Sbjct: 542 SEFIPVAEDSGLILPIGEWVLTQACQQAARWPA---PMQVAINISPVQVMAQNLPEAVGR 598 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 K ++P+ + LEITE + ++ + L K G +IA+DDFGTGY++ L+R Sbjct: 599 ALKASGLAPRRLELEITESVFINETRGTVDRLHALRKVGVQIALDDFGTGYSSLAYLRRF 658 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV++++ + IVR+I LAK+ +S VAE VE Q ++L G Sbjct: 659 PFDTLKIDRAFVREVLLSRDARAIVRNILALAKSLRMSTVAEGVEEPAQASVLGNEGCDL 718 Query: 716 LQGYLIGRPQPLAD 729 +QG+L+ RP P + Sbjct: 719 VQGFLVSRPMPADE 732 >UniRef50_C5D169 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Variovorax paradoxus S110 RepID=C5D169_VARPS Length = 723 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 100/519 (19%), Positives = 198/519 (38%), Gaps = 32/519 (6%) Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + + + + + T+ ++ L + +++ QG E+ + Sbjct: 188 SRWAVIALVALAILLSAAAATVVSRRITGSIARLVAFSGRVAAGDFSARTPQGHADEFGI 247 Query: 292 AFIL----AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 A I S LL QA DPLT LPN LE Q Sbjct: 248 LASAMNQMAESIENSNALLESSADT---------LKHQATHDPLTGLPNRALLEDRLRQA 298 Query: 348 AGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +D + ++ G ++ + + ++ + + + G Sbjct: 299 ISYADRYGRLMTVVFINLDGFKRINDSLGRKGGDELLKVMAERMARCLRSVDTVVRTGGD 358 Query: 400 ELLLVL-----SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 E +++L G + L+ ++ + ++ + + + + + L Sbjct: 359 EFVIILYDQPGDGTDIAPALRKLLETI-AQPARIGSQAVQLTGSMGVATYPADGADADAL 417 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 L + A + +SG ++ L +R A+ + + L QP + Sbjct: 418 LVNADAAMSHAKASGRN-NFEFYAAEMSGAIRDELALREGLRHAVARSEFHLAYQPQLDM 476 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK- 570 G + ++ + G+++P +F+PL + L VL + Sbjct: 477 ESGRVTGVEALIRWQHPERGLVSPAQFIPLAEETGLIVPIGEWVLRTACFQNKAWQDAGL 536 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVN+ ++ + ++ + + P+ + LE+TE + + ++ +++ L Sbjct: 537 PPFIVSVNVSARQFRERTLIAQVALALRDSGLEPRLLELELTESLVMEDLDKALQSMKAL 596 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G +++IDDFGTGY++ LKR +KID FV+DI + D I ++I L Sbjct: 597 RAMGVQLSIDDFGTGYSSLSALKRFPIARLKIDQSFVRDIPGDEEDKAIAKTIIALGHEL 656 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L V+AE VET+QQ L G +QGYL RP P A+ Sbjct: 657 NLKVIAEGVETEQQLEFLRAHGCDEMQGYLFSRPVPPAE 695 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 95/477 (19%), Positives = 186/477 (38%), Gaps = 22/477 (4%) Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 W ++ E+ + + + + + Sbjct: 350 TGVWQGEICNRKKNGDIYI-----EWLTIIEIKEPNNSDAIYAAIFSDITERKNAEDKIV 404 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT LPN R + + + +D + ++ G Sbjct: 405 QLAYFDELTGLPNRRLFNDRLKMALAAAHRDQHLLAVMFIDLDRFKEVNDSLGHSAGDCL 464 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTG 432 + + + + E + L +L G E +++ + + + + + ++ Sbjct: 465 LTLVAARIEATLNEGDTLARLGGDEFVVLCE-INKIDAVASLADKILNNLNSPFQLDHVE 523 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + + + LL +S + + ++ ++ +++ ++ Sbjct: 524 VGVTASIGAAVYPDDGLDSETLLKHADIAMYRSKDVGRN-SFQLFKPSMNARSLERLAMM 582 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 + + ALD + LY QP + +++ G + +L D G+++P +F+PL + L Sbjct: 583 SRFQHALDNNEFELYFQPKQCLKSEQIMGVEALLRWHDPDLGMISPAQFIPLAEELGLIV 642 Query: 550 RFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 R DL V+ K L + R ++N+ L Q +A I + K Y++ + Sbjct: 643 RLDLWVINQAGKVLTLWQKEGLVAGRLAINISACHLSQGKLANNIGTMLKHYNLPGSLLE 702 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 +E+TE S+ + ++QL K G IA+DDFGTGY+ L +L D +KID F+ Sbjct: 703 IELTESSFISSFTQAKTQLQQLKKLGVHIALDDFGTGYSALSYLTKLPFDTLKIDASFIA 762 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I ++ IV ++ LA +L VVAE VE Q+ L LG +QGY RP Sbjct: 763 KIPDEYGNSQIVAALIALASNLNLMVVAEGVEQPAQKNYLISLGCNVIQGYYYCRPL 819 >UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alphaproteobacteria RepID=B7KRA3_METC4 Length = 954 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 103/560 (18%), Positives = 197/560 (35%), Gaps = 33/560 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVPVFFIIFTLG 254 L + + + L Y F + V + + Sbjct: 385 SLLKEQEDQLKRSNAQLDAALSNMLQGLCLYDAEGGLLVYNRRFCDMFGVDAAALRPGMS 444 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET-------EYSLAFILAVLISFSVCLLY 307 + + + + + LL + LQ + L + + Sbjct: 445 IRDVARLVEASSDSGRAIDLLVEQEALLQRGLSASLCCPIRTDCIVALKQQPTAEGGWIA 504 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRID 358 + R A D LT L N + E+ AG + CL +D Sbjct: 505 TYEDVTQRYEAEARIITMARKDALTGLANRMVFGERLEEAAARLDEGAGAGFATLCLDLD 564 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET----EGRL 414 + ++ G + +RS+ L +++ + + +L G E +V +G + Sbjct: 565 RFKEVNDTLGHPIGDGLLRSVAERLQGCLRDTDLVARLGGDEFAIVQAGVQAGTHARRDA 624 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + L + + + + +G + + + LL ++ A Sbjct: 625 SALAKRLIAAFQQPFLLDGHTVTVGLSIGISLAPEHGTSPEKLLKSADLALYRAKATGRG 684 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 +E + + K+ L + ++ A+ G+ L QPI + +L Sbjct: 685 -CWAFFDEEMDVELRKRRALESDLKKAVGNGEFELVFQPIVKLDRQRIASCEALLRWRHP 743 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 + G ++P F+PL + VL AT P R +VN+ Sbjct: 744 ERGYVSPADFIPLAEETGTIGEIGEWVLRKACSEAATWPS---NIRVAVNVSAAQFKNAA 800 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++ + + LEITE +++ +++ + L + G R+A+DDFGTG+++ Sbjct: 801 VVRAVMDALAASGLPAHRLELEITESVLLNDSVTTLATLHTLKRLGVRVAMDDFGTGFSS 860 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+ D IKID FV+++ +IVRS+ L ++ ++ AE +ET+ Q L Sbjct: 861 LSYLQSFPFDKIKIDQSFVRNLAAPGNSRLIVRSVVGLGRSLGITTTAEGIETEAQLEQL 920 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 G QGYL RP P A Sbjct: 921 RLEGCDEGQGYLFSRPVPSA 940 >UniRef50_C5T6Q1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6Q1_ACIDE Length = 760 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 104/515 (20%), Positives = 196/515 (38%), Gaps = 33/515 (6%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + + V ++ + + + P + + + E S Sbjct: 228 WMAVNALLASMAVLTVLGVMLIRSIVQPLQAVKQVFQHISDGKLDSAIEVRGHDEISQL- 286 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 L+ + + + + H A DPLT LPN R L++ Sbjct: 287 -----------LIALREMQAKLGANEKAIHHLAYYDPLTNLPNRRLLKECIQAALAASNR 335 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + ++ L +DN + ++ G + + + L +Q + ++ G E ++++ Sbjct: 336 DDHHRALLLLDLDNFKTINDTLGHELGDAFLMDTAQRLRHAVQAPHFVARIGGDEFVVLV 395 Query: 406 SGPETEGRLQH-----MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 + + + L + F + T++ LL + Sbjct: 396 DRLPADEAAALEQVNLLADQLLAAVAGPCLLAGQWHHGSASIGICLFRHHNATIKDLLKR 455 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--E 515 Q+ + + Q + L +RTA+ +G + L+ Q N + Sbjct: 456 ADAAMYQAKNAGRN-NHCLFDPAMQAQLETRTALEAALRTAVARGQMELHFQVQVNGAMQ 514 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGP 573 G + +L G + P +F+P+ L VL+ L + Sbjct: 515 ATGAEVLLRWNHPTHGPVPPAQFIPIAEASGLIHSIGAWVLQRACAQLKAWDGQAHTRHL 574 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ + ++ R +P ++LE+TE + ++ + L + Sbjct: 575 ELAVNVSAQQFRHPDFVAQVCDALDRAGANPGLLVLELTESLVLHDIADTVQKMLALRRH 634 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R A+DDFGTGY++ LK+L +K+DG FV+DIVT+ DA+IV++I +A+ L Sbjct: 635 GVRFALDDFGTGYSSLSHLKQLPLHHLKVDGCFVRDIVTDPSDAVIVQTIIGMARNLGLC 694 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VE + Q+ +L L QGYL RP PLA Sbjct: 695 VIAEGVEAEAQRQVLLDLQCPVYQGYLFSRPLPLA 729 >UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL67_THISH Length = 685 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 119/676 (17%), Positives = 222/676 (32%), Gaps = 41/676 (6%) Query: 83 FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYL 142 + ++ G + + + R + + L + I+ S+ Sbjct: 7 SQRITLIGGVLLAALTLVSGFAVYAVMQRQLEAVLVNSLQSSLHSDRRLFETEIRGSVVN 66 Query: 143 VGSFFDFPLKISTF------FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + P I DA A ++ L+ R + Sbjct: 67 ALTVSTRPFVIQNLARLREAPEDASAAHSLQRLVRRLVKSQQQTAEANARLRDLEER--- 123 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC---TPYENDFIAGYLVPVFFIIFTL 253 +L L+A +LL + C YE I ++ Sbjct: 124 -------WRFALDSAGAGVWDLDLSAGKILLSVRCKHMLGYEEHEIGASAEEWQALVHRD 176 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS--VCLLYMVRI 311 L L + + G ++A L+ Sbjct: 177 DAPALIAACQRLVDGEVQSFTHEHRKRCKDGSWKWVQARGMVAARDENGAPTRLIGTYID 236 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + QA DPLT LPN R A + + +D + + Sbjct: 237 ISERKRAEEIIQQQANFDPLTKLPNRRLFLDRLDQQIAKCQRTGAALALLLIDLDEFKEV 296 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + ++ R + +++ + + +L G E ++LS + ++ + L S Sbjct: 297 NDTLGHDVGDVLLQEAARRISGCIRDTDTVARLGGDEFTVILSDLTGKAHVEEIAQKLIS 356 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 R + + + G+ E + L+ + Sbjct: 357 RVAEPYYLREGVAHISASIGITLYPGDAEDMGELMKHADQAMYSAKRLGRNR-FCYFTHA 415 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + K++ L +R A++QG + QPI + + + +L + G++ P + Sbjct: 416 LQEAAQKRLRLSRELRQAVNQGQFEAHFQPIVELASGRIQKAEALLRWHHPERGLVGPAE 475 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL L V ++ + SVN+ PL + A R+ Sbjct: 476 FIPLAEDTGLIEGVGDWVFREAVRRARVWRDRFGTDIQVSVNMSPLQFRSEG-AERVESW 534 Query: 597 F---KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + + +++EITE + + + G +IAIDDFGTGY LK Sbjct: 535 LYHLEEMGVRGEQIVIEITENLLLHAHDEVTRQLFRFRDAGIQIAIDDFGTGYCTLSYLK 594 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D +KID FV+++ + D + ++I +A L V+AE VET+ Q+ LL G Sbjct: 595 QFPIDYLKIDRSFVRNLENDPNDVALSKAIIVMAHELGLKVIAEGVETEGQRRLLSDAGC 654 Query: 714 QYLQGYLIGRPQPLAD 729 + QGYL R P D Sbjct: 655 DFAQGYLFARALPAED 670 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 96/462 (20%), Positives = 174/462 (37%), Gaps = 18/462 (3%) Query: 284 GVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 T Y ++ L + + ++ R + D LT LPN L Sbjct: 606 KDGTVYPEWMAISALRDSQGLTTHYVASFSDLSTAKAAESRIQWLSQFDTLTGLPNRTLL 665 Query: 341 EQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + ID+ ++ G + + + R L ++E + Sbjct: 666 QDRTALALSMVQRAREPLTMLLVAIDHFGAVNDTLGHQLGDELLVEMARRLSDSVREQDT 725 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 + ++ G E +LVL G G +L SR L + F N Sbjct: 726 VSRMGGKEFVLVLPGTPAMGAAHLATELLWKLSRPCSLGMHELTLTASIGIASFPDNGAD 785 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 L + ++ + + Q L+ +R A+ L L QP Sbjct: 786 FDTLFKAVEIAMHRAQLKGRD-TYQFYSDDMYEQVLAHDRLIKALRQAIVLDQLQLVYQP 844 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + G + +L + G ++P +F+PL + L VL + + Sbjct: 845 QVDLQTGQICGVEALLRWQHPELGAVSPGQFIPLAEESGLIIGIGEWVLRRACQDIRRWL 904 Query: 568 CDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 K P ++N PL N+ ++ I P + +E+TE + + Sbjct: 905 DHGIKVPHVAINASPLQFRDNNLVLQVKAALTESQIDPALIYIEVTESALMDDVPRNEAM 964 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 ++ L G ++++DDFGTGY++ LKR D +KID FV+DI T+ D+++V+ I + Sbjct: 965 LKALKDLGIKLSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQSDSLLVKVIVSM 1024 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A + V+AE VET+ Q ++ +QGY +P Sbjct: 1025 AHGLGMKVIAEGVETEAQCEIMRTSICDEIQGYFFCKPISAQ 1066 >UniRef50_UPI0001C42794 probable signaling protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42794 Length = 634 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 96/491 (19%), Positives = 188/491 (38%), Gaps = 17/491 (3%) Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ-GVETEYSLAFILAVLISFSVCLLYMVRIY 312 L+ L + L ++ + + S+ +A + + Sbjct: 130 TEELLKRSLDQLANSNRKLLDHHHTPSQTTIHDDLGQSIDESMAAYPEIRQLMTQFNEMN 189 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMS 364 R +R QA D LT LPN +E+ ++ + L +D + ++ Sbjct: 190 IRINQARKRIEHQAYHDALTGLPNRYHIEEYLKRSIEYAKVNNSSLTLLYLDLDRFKLVN 249 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--N 422 G + ++ + L + EN + + G E L+VL E IL Sbjct: 250 DLLGHQVGDLLLKEVAEKLSQTICENGMIGRQGGDEFLIVLEDMNEEEVRAIAGRILDCL 309 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S + + F + ++ ++ + S Sbjct: 310 SYPFVYAGKEFFISPSIGISMFPKDGNDIESMMKNADTAMYMAKERGKN-NFQFYSSEPS 368 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 +++ LL N +RTAL + +L QP + E G++ ++ + G+++P++F+ Sbjct: 369 SLLSRRHLLENKLRTALKNKEFILNYQPQVHLNSHELRGFEALIRWNNPELGLISPEEFI 428 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + + VL+ + S+N+ ++ + K Sbjct: 429 PIAEETGIITDIGTWVLKEACRQNKAWQEQGFVRVPVSINVSSQQFRDPEFVWNVLNVLK 488 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + PQ + +E+TE + ++ ++ + ++G ++AIDDFGTGY++ L +L D Sbjct: 489 ESKLHPQYLEIELTESTT-HHFVHTVEKLQLIKQYGIKVAIDDFGTGYSSLSALDQLPID 547 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 I+KID F+K I+TN A I ++I DL ++AE +E Q L++ QG Sbjct: 548 ILKIDRSFIKHILTNPNKAAIAKTIIDLGHNLDFKIIAEGIEEPSQADFLNEHQCHIGQG 607 Query: 719 YLIGRPQPLAD 729 +L P D Sbjct: 608 FLFHPPLNPTD 618 >UniRef50_A8URG3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URG3_9AQUI Length = 570 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 85/461 (18%), Positives = 168/461 (36%), Gaps = 17/461 (3%) Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + ++ L + + + + L A D LT LPN L Sbjct: 97 VSRGGSPFTAETTL--VKADEENYIAIFLDSTDKRSLEASLRSLAYYDALTGLPNRALLY 154 Query: 342 QAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 Q + IDN + ++ G + +++ L N + Sbjct: 155 DHLSQFLFQAKNENKKLAVVFFDIDNFKLINDTLGHEVGDSLLKAFAHRLTSHFPPNTMV 214 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 + E ++VL ++ +V+ + + + A + + Sbjct: 215 ARFGSDEFVVVLESIAGIDDVEEVVSGFINSVTTPFFIEGQKIYVTVTAGISLYPIDGGD 274 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 Q LL + + ++ + +++ L +R AL++ + +LY QP Sbjct: 275 PQTLLRNADIAMHHAKELGK-SSFKFFTNELNLKVSERFTLQAELRDALEREEFVLYYQP 333 Query: 511 IRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 G + ++ D G++ P +F+ + + +L VL + Sbjct: 334 QFELRTNTIVGVEALIRWHHPDRGVILPGRFMHVAEETDLIVPLGYWVLRRACEDGRRLV 393 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + + +VN+ + +++ ++ + P + +EITE N + + + Sbjct: 394 ENGFPLKVAVNISAKQISEEDFLEKLRDILNATGFDPNLLEVEITESVLMKNKQQAARVL 453 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L K G IAIDDFGT Y++ LK D +KID F+ D++++ D I +I +A Sbjct: 454 RELKKMGISIAIDDFGTSYSSLNYLKYFPVDKLKIDRSFIGDVISDPNDVAIATTIIAIA 513 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L AE VET++Q L QG+ P L Sbjct: 514 HNLGLKATAEGVETEEQLIFLKLWQCDEAQGFYFSPPITLD 554 >UniRef50_Q984Y8 Mll7787 protein n=2 Tax=Mesorhizobium RepID=Q984Y8_RHILO Length = 724 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 101/441 (22%), Positives = 168/441 (38%), Gaps = 18/441 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQEAGKSFCCL 355 + R A D LT LPN + + L Sbjct: 274 GGGWVVTFDDVTERRRTEERMIHLAHHDTLTGLPNRSMFRERLDLALEDAAAPPLAIFSL 333 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLSGPETEGRL 414 +D + ++ +G ++S+ L + E + + + G E +++ + Sbjct: 334 DLDRFKAINDTWGHPAGDWLLKSVAERLQRCLHNETDVVARFGGDEFVVMQFNSKGIADA 393 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + ++Q + + +G F + LL ++ + Sbjct: 394 EKLAKRIVEAIAKQFRDKSRDMHIGISLGIAVFPQDGRDADTLLKNADTALYRAKSEGRN 453 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 L E + + L + AL + + L QPI N E G + ++ Sbjct: 454 L-YRFFEPAMDAIVQARRALEVDLDAALPRQEFDLDFQPIMNIASGEIIGAEALMRWHSP 512 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G + PD F+P+ + L L A+ P G R +VN+ + L Sbjct: 513 ARGTVAPDAFIPVAEETGLIVPLGEWALRKACAAAASWP---PGLRIAVNVSAVQLKSGG 569 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 A +I + + LEITE +++ + + QL G RIA+DDFGTGY++ Sbjct: 570 FARSVISALAFSGVPAGQLELEITETVLMDESKAVLKTLRQLRDLGIRIALDDFGTGYSS 629 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+R D IKID F++D+ N A IVR+I L + V AE VET+ Q +L Sbjct: 630 LAYLRRFPVDKIKIDRSFIRDMG-NRDTAAIVRTIIGLGNELGIVVTAEGVETEVQLDML 688 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 G + QGYLIG P AD Sbjct: 689 RDNGCEEAQGYLIGVPSKAAD 709 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 98/433 (22%), Positives = 172/433 (39%), Gaps = 19/433 (4%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQEA-----GKSFCCLRIDNLEFMSR 365 E ++ AL DPLT LPN + ++ + L +D + ++ Sbjct: 155 LEKAQQKLSYDALHDPLTGLPNRSLFLERVGRSLQRAQEEKDYSFAVLSLDLDRFKVVNE 214 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + +I RTL L+ + + +L G E ++L + + Sbjct: 215 SDGHRVGDRLLVAISRTLETLVGSTDTVARLGGDEFAILLEKIADVNEAIRTTQTIKKQF 274 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + +L ++ + +E + Sbjct: 275 VSPFQLTEREIFTSPSIGLTFSSPKYKHPEEILRDADIAMARAKQKGRGR-YEVFDEEMH 333 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 Q K + L +R A++ + L+Y QPI E G++ ++ G ++P +F+ Sbjct: 334 TQALKLLNLETDLRRAIENQEFLVYYQPIMALEKTKIVGFEALIRWQHPKKGFISPGEFI 393 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRL 596 P+ + L VL+ + L T SVNL L + I I Sbjct: 394 PIAEETGLIIPIGQIVLKEACQQLKTWQEKLPKAKNLTISVNLSSQQLKEPEILQHIDHS 453 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P+++ LEITE NA+ + + QL + +I++DDFGTGY++ L R Sbjct: 454 LNVTGLQPESLKLEITESLLMENADVATTLLRQLKERKIQISLDDFGTGYSSLSYLHRFP 513 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV I + I++SI LA + VVAE +ET++Q L L ++ Sbjct: 514 VDTLKIDRSFVNCIGKPEENLTIIQSIMALAHNLDMDVVAEGIETEKQLTFLKFLECEFG 573 Query: 717 QGYLIGRPQPLAD 729 QGY +P P + Sbjct: 574 QGYFFSKPLPSHE 586 >UniRef50_Q0KC83 Predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains n=3 Tax=cellular organisms RepID=Q0KC83_RALEH Length = 1124 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 100/486 (20%), Positives = 176/486 (36%), Gaps = 28/486 (5%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 +P ++ + L + ++ + + + + + L Sbjct: 627 FAFPLSRGHVSLGVVELYSRSKRSPDT-----HALAMASGIANQTGHFLL-------RRQ 674 Query: 318 LNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGL 369 A D LT LPN +AL +A + +D + ++ G Sbjct: 675 AEENLRFIANHDALTGLPNRLMFKAEFEQALTRARASGQALHVIFVDLDEFKVVNDTIGH 734 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQI 426 +R + L ++E E + + G E +++L L + + + Sbjct: 735 NAGDIVLREMADRLRGSLEEVELITRFGGDEFVVLLDPKGDSTILDRTIARIQAALAPGF 794 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 N + L M F + Q LL + +S Sbjct: 795 VVNESELRMTASIGISSFPEDGSDWQTLLKHADLAMYGAKQLGKN-GYQFYCRGMSASLQ 853 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 +++ + + + AL+Q + +LY QP + + ++ + G++ P F+P Sbjct: 854 RRIDMESHLHRALEQDEFILYYQPRIALASGACTAVEALIRWRHPELGLVMPGDFIPFAE 913 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 Q L + A R SVNL K++ II ++ + Sbjct: 914 QSGAIVEIGAWALREACRQNAAWRAQGLPPVRVSVNLSARQFADKSLRLTIIDALRQAGL 973 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + LE+TE +AE + + +L + G R+AIDDFGTGY++ L R D +KI Sbjct: 974 PGNLLELELTESMVMRDAEQASSWLSRLKRTGVRLAIDDFGTGYSSLAYLSRFPIDTVKI 1033 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 DG FV+ I + D I ++ L L VVAE VE + Q L + G +QGY Sbjct: 1034 DGSFVRYIPESRSDTQITSAVIGLGHRLGLEVVAEGVENEVQLEFLRREGCDEVQGYYFS 1093 Query: 723 RPQPLA 728 P P A Sbjct: 1094 HPLPPA 1099 >UniRef50_A8UUX8 Preprotein translocase ATPase subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUX8_9AQUI Length = 1010 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 112/566 (19%), Positives = 219/566 (38%), Gaps = 27/566 (4%) Query: 185 YLTRMIV-SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 L R I F+ ++ T W+ + + I+GY Sbjct: 444 KLVREIADEVSFSLTYMEKEKTLHTLSLAVEQTSDWVLITDKEGNIQYANRAVEEISGYS 503 Query: 244 VPVFFIIF--TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVLIS 300 V G+ F W + +G + L + + Sbjct: 504 VRELIGDTPKIFKSGRHGKNFYKRLWEKVLAGETFRSVFINRGKDGKLFYLDQTITPIKD 563 Query: 301 FSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 ++ V + + L + + A DP+T LPN + + Sbjct: 564 SFGNVVGFVATGKDITHEKELKEKLNYIAYYDPVTELPNRTNFIERLKFSISRTKLLNRN 623 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D ++++ YG + ++ I + + ++E + + +L E +VL Sbjct: 624 LAVLFIDVDRFKYVNDTYGYPVGDEVLKVIAQRIKDAVREGDTIARLGSDEFGVVLVDIA 683 Query: 410 TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + +++ + S + I + + F + + L+ + + Sbjct: 684 HKEDIPKVMDKIFSNMEKPIEVEGKEVVLTLSVGIAVFPEDGTEAEDLVKKAEMALAHAK 743 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEIL 523 + E ++ T+ VL+ + AL++ + +++ QP + + G++ +L Sbjct: 744 EDVRN-SYQFFREDMNTHITELVLMERHLFRALERAEFVVHYQPYFDLKSMKAVGFEALL 802 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 D G + P KF+P++ L + +L+ + + G SVN+ P+ Sbjct: 803 RWNSDDLGFVFPSKFIPILESTGLIIKVGEWLLKEACR-----LAETTGKSVSVNVSPVQ 857 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 K+ ++ R + I + LEITE + E + ++ +L K G ++AIDDFG Sbjct: 858 FKDKDFPRKVERAIEECGIEGGYITLEITESTIMDDVEFAKKSLRRLKKLGVKVAIDDFG 917 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK L D +KID FV+DI + D IV +I LAK L VAE +E ++ Sbjct: 918 TGYSSLAYLKLLPVDFLKIDVSFVRDIDRDPDDRAIVNAIIQLAKNLGLRTVAEGIENEK 977 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 +L +G QGY + RP P + Sbjct: 978 HLEILKSMGCDIGQGYHLARPMPEEE 1003 >UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6D2_PELCD Length = 976 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 86/432 (19%), Positives = 164/432 (37%), Gaps = 16/432 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFM 363 ++ A D LT L N L++ + + C L +D + + Sbjct: 518 ISEQNKAQKKIAYLAHYDQLTGLANRSLLKERFDYAVRHAMRSGSQVALCLLDLDGFKAI 577 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + + + L ++ + ++ G E +++ + + +V S Sbjct: 578 NDLQGHHVGDQLLCEVAKRLQTSIRSTDMAARIGGDEFVILFTDMQKTSVATTLVQKAMS 637 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + F + L + + + Sbjct: 638 CFTSAYDLQEHTHTITASMGVAIFPEDGHDFPTLFKHADAAMYFAKESGRN-GVQFFRQE 696 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 + + ++ + +R AL + L L+ QPI G + ++ G++ PD+ Sbjct: 697 IGQRVQNRLTMETELRQALQEDQLELHYQPIWQLTEKCIVGLEALVRWRHPQKGLLPPDR 756 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + NL VL + + + + + SVN+ L + + RL Sbjct: 757 FIPIAEESNLIQALGQWVLNAACRDMRSWRNQGFESLPVSVNISARQLFHDDFTSSLARL 816 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 K Y + P+ + LE+TE + + L G + +DDFGTGY++ L R Sbjct: 817 LKEYALPPEQLELEVTETIFLQKDTTVEKVMNHLKNIGVGLVLDDFGTGYSSLSYLNRFH 876 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F+ I DA++ +I +A++ + VVAE VET Q+ L + G Sbjct: 877 IDKLKIDRSFMAHICQKEQDAILTATIIRMAQSLGMQVVAEGVETAGQELFLMEQGCDLA 936 Query: 717 QGYLIGRPQPLA 728 QGY +PQP+ Sbjct: 937 QGYFYYKPQPIE 948 >UniRef50_A3WPN1 Signaling protein with a ligand-binding sensor domain, PAS, GGDEF andEAL domains n=1 Tax=Idiomarina baltica OS145 RepID=A3WPN1_9GAMM Length = 1135 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 94/459 (20%), Positives = 179/459 (38%), Gaps = 15/459 (3%) Query: 284 GVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 E L L + + S + + + TD LT LPN Sbjct: 664 ADGAELLLELTLDAVRNDSGEIKLIVASFSDITERRNTENELRRLSNTDSLTGLPNRSYF 723 Query: 341 EQAP----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + + + +D+ + ++ G + + + L L + + LY+L Sbjct: 724 QVSHSNLVRKRVAHALLLFDLDDFKRINDSLGHEVGDELLCRVADRLAELGRRQDTLYRL 783 Query: 397 PGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++ + + +N ++ + +G + + T Q Sbjct: 784 GGDEFGILIEDNTDINVISTIAQQVNTEIAKAYRIKGHEIALGSSIGIVLYPHDAHTSQE 843 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 LL + + ++ ++++L + +R A+ + +Y QP Sbjct: 844 LLQKADTAMYHAKQRGGN-CYQFFNASMNENAIQRLVLESQVRHAIRTHQVEVYYQPKME 902 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-D 569 G + + G ++P +F+PL + L QVL + + + Sbjct: 903 IATGHISGIEALARIRDEYGQFISPAQFIPLCEETGLIIPLSEQVLRTACRDMRQLLTLQ 962 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 ++NL Q ++A I ++ + + P+ + EITE S+ E ++ +E Sbjct: 963 GAPRSVAINLSARQFTQSSLALFIEQVLQEEEMHPRHIEFEITEGMVMSDPERAIAMLEN 1022 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G ++A+DDFGTGY++ LKR +KID FV DI + D +V SI +A Sbjct: 1023 LADMGVQLALDDFGTGYSSLAYLKRFPMHTLKIDKEFVDDITFDERDRKMVESIIGMAHN 1082 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE VE + Q +L +L +Y+QG+ +P Sbjct: 1083 LGLKVVAEGVEEKAQLDILEQLQCEYIQGFYFAKPMSAE 1121 >UniRef50_B9Z392 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z392_9NEIS Length = 709 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 114/570 (20%), Positives = 212/570 (37%), Gaps = 33/570 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--------------LLLCTPY 234 + + E+ +L + + L Sbjct: 130 LALQRRSLARANLAMAQQLHTSERMHRSLVEASPDLIFTLDERFCFTFANERTHGLIGYS 189 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + + L+ + + ++RY + T + + + E SL + Sbjct: 190 PQELLGQSLLDLVLPVD---AERVRYVLEHRTGQRAIEFRIASRGGEIAERHFEASLVPV 246 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 L S L + R + R A D LT LPN + Sbjct: 247 ALDLPQLSSRLYGVARDVTDKKHAEHRMAYLAYHDLLTGLPNRALFRDRLGLAIMQAKRK 306 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + +D + + +G + ++ + + L +++E + L +L G E ++L Sbjct: 307 GRQVAVLFVDLDRFKLANDTFGHIKGDELLKQVGQRLQCVLRECDTLARLGGDEFTILLP 366 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + L + + + + F + + ++ LL Sbjct: 367 DLSGKEDAALLAGKLVKEVAAPFSIDGDDVFLTVSIGIAVFPDDGDDIETLLRHADIAMY 426 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 Q A ++ ++++ + N +R AL+ LY QP ++ G + Sbjct: 427 QVKAQGKN-GFGFFLPVMDAAASQRLRMENEVRRALELEQFELYYQPQVEFDSRRIIGCE 485 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNL 579 ++ G++ P FL +I + L V+E + L R SVN+ Sbjct: 486 ALIRWPHPTRGLVPPGAFLGVIEEIGLMKPLTYWVIERACQTLREWKLAGLELSRMSVNV 545 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P L+ + +I RY I Q+ +EITE ++ ++ + L + G R+AI Sbjct: 546 PPEVLVDDDFYDYLIATVDRYGIRRQSFEIEITENAFIADQQAMSLKLAGLAEEGIRVAI 605 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGT Y++ L+ L +KID FV++I D+ IVR+I +A +L++VAE V Sbjct: 606 DDFGTQYSSLSYLRHLPVTTLKIDQSFVREIEAGKEDSPIVRAIVAIAAGLNLNLVAEGV 665 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET+ Q L LG +QGYL G+P P +D Sbjct: 666 ETEVQADYLGSLGAVEMQGYLFGKPMPASD 695 >UniRef50_C5BN58 Predicted signal transduction protein, with PAS, HAMP, GGDEF and EAL domainsl n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BN58_TERTT Length = 807 Score = 588 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 123/641 (19%), Positives = 234/641 (36%), Gaps = 48/641 (7%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + + +++ V F L S+ D T ++ + A + N Sbjct: 163 FLRFSITLAFALTIALF-VAYFVGGRLVGSSLVPLRDLFNTSQEVAASPYANIRANKKSN 221 Query: 185 Y-LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL---------------- 227 + ++ + D A + E R L+ A + + L Sbjct: 222 DEIGDLVDVFNQILDTLETDNAALMESESRFRVLAEHAPIGIFLRNRKLIMEYTNDRWCE 281 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + TP + + + P ++ K R + + Sbjct: 282 ITGLTPSQANAFTNNIDPKDAALYESVQDKARSQHTPQV----------IEYTYTTPQGS 331 Query: 288 EYSLAFILAVLISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 +L LA L + + + + A DPLT LPN R E Sbjct: 332 RRTLMEHLAPLNNLQGFQGFVGSLLDVTELKTAQMELEKLAFYDPLTDLPNRRFFRGHLE 391 Query: 346 --------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + +D+ + ++ +G + I + L + + ++ Sbjct: 392 LTIAAAKKYDKRLAVMMTDLDDFKKINDTFGHDAGDQLLMQIGKRLKAASASIDVVSRMG 451 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +L++ ++ +L H N + ++ N +++G F + T + L Sbjct: 452 GDEFMLLVKNIDSSSQLDHKANNILRALREKMEINGQQVEVGGSIGIAVFPNDAITYEEL 511 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 + + + + + + ++ L +R ALD+ L +Y QPI + Sbjct: 512 IRYADIALYNAKSMGGN-TVSYYSSDLDKRIKDKMRLEQKLRVALDKRLLEVYIQPIYDA 570 Query: 515 EGEGY---DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + ++ + + G ++P+ F+ L + L VLE + +L H Sbjct: 571 ATREMIKGEALVRWMDPEEGFISPEVFVSLAEESGLIYDLGSLVLEKVCAYLHEHEGKLH 630 Query: 572 GP---RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 +VNL + I FK+Y I P+ + E+TE + + ++ + Sbjct: 631 LLGMRTIAVNLSARQFFASQLVTYIEATFKQYQIDPKQIEFELTESMVMDDVDQAIDIMR 690 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 + G ++IDDFGTGY++ LK+ + +KID F+KDI + D I +I +A Sbjct: 691 AIRNLGCSLSIDDFGTGYSSLSYLKQFPINTLKIDRSFIKDIPEDKNDVEIAYTIIAMAH 750 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+VVAE VET++Q LL YLQGY RP P++D Sbjct: 751 NLGLTVVAEGVETKEQWQLLRDKNCDYLQGYYFARPMPMSD 791 >UniRef50_A6FEH9 Sensory box protein n=1 Tax=Moritella sp. PE36 RepID=A6FEH9_9GAMM Length = 627 Score = 588 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 92/429 (21%), Positives = 176/429 (41%), Gaps = 21/429 (4%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYG 368 +H A D LT L N R L Q E + + + +D + ++ G Sbjct: 186 QSQEEFHRLAFFDSLTGLANRRLLNQTIETQYQLAKTNQVVGALLFIDLDFFKAINDSLG 245 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMVNILN- 422 + + + L + + + + +L G E +++L E + L Sbjct: 246 HAVGDGILVEVAERLKEIPRPEDFIARLGGDEFVILLPDLSENPMHAEQHANLLAEQLIE 305 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 S+ + L +G F + LL Q Q+ ++ + Sbjct: 306 RISQPYLYKGQALYIGASIGVTLFPSKDQHADDLLKQADTAMYQAKSNGRKKVY-FFDVK 364 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDK 537 + + K++ + N +++A+ + +L L+ QP +N + G + ++ ++P + Sbjct: 365 MQRKADKRLHIYNCLKSAIAKNELFLHYQPQHMVQNGDIIGVEALVRWHLGGKQQISPAE 424 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + +L + VL++ + P+ SVN+ N ++ + Sbjct: 425 FIPIAEETDLIIDIGIWVLQAACRQFVEWQLQGVNVPQLSVNVSTRQFHDNNFVDSVLMV 484 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P + LEITE +AE ++ + L G A+DDFG GY++ LKRL Sbjct: 485 LDETGMDPMQLNLEITESVVIEHAEDAIRKMTDLKNIGVSFAVDDFGVGYSSLSYLKRLP 544 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 A+ +KID F++ I N D IV ++ +AK +V AE VE++QQ L + + Sbjct: 545 ANELKIDRSFIQGIPYNVSDMAIVEAVLAMAKHMGFNVTAEGVESRQQLEFLQRQQCSFY 604 Query: 717 QGYLIGRPQ 725 QG+ +P Sbjct: 605 QGFYASKPL 613 >UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2I6_METRJ Length = 819 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 109/620 (17%), Positives = 206/620 (33%), Gaps = 33/620 (5%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML----FYYLTRMIVS 192 ++ + F A A+ + + A + M F LT M+ Sbjct: 180 VLTLAIAVLHFLAMAAARVVPDPALAVPQLGLARGVLAAGIAGMMAVILAFAALTLMLDH 239 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 + R K ++++ + Sbjct: 240 LRRINVALARQGRMLREKTLLLDATLDSMDQGLIMVDAGGVVRVCNERALALLDLPRAMM 299 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE----------TEYSLAFILAVLISFS 302 R + + +++ E L + + Sbjct: 300 QARPSYRAVLRHEASRRERRRPDRSIRTWIERGEAGQTQVHERARPNGLVLEVRTVPLAD 359 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + + + A D LT LPN + ++ + Sbjct: 360 GGFVRTFTDITKRKAAEAEVARLARHDVLTGLPNRALFHETLERSLADIVQRGGACAVLY 419 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G +R + L + + + +L G E + LS Sbjct: 420 LDLDGFKSVNDSLGHQAGDELLRRVAAGLRGIAGDGA-VARLGGDEFAV-LSDGGAAEAG 477 Query: 415 QHMVN--ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 L + +G + +PL + ++ A Sbjct: 478 ALAERLIALFDSPFSVGGHRVGVGLSVGIALAPEHGTDAEPLYRRADLALYRAKAEGRG- 536 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYD 529 + + ++ +L +R ALD L L+ QP + G++ +L Sbjct: 537 TYRIFTPAMDEEAEERRVLERDLRQALDDNTLGLHYQPQVDGHTGALVGFEALLRWTHPV 596 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G ++P+ F+PL + L VL + A + +VNL P + ++ Sbjct: 597 RGSVSPNLFVPLAEETGLIVALGDWVLREACREAAQWAQ---PLKVAVNLSPRQFQKPDL 653 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ + +SP + LE+TE ++ ++ + +L +G RI++DDFGTGYA+ Sbjct: 654 PETVLAILAETGLSPDRLELEVTESIIINDMARAVGILRRLKSYGIRISMDDFGTGYASL 713 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+ D +KID FV + T A+IVR++ L ++ + VVAE VET Q L Sbjct: 714 ATLQAFPFDKLKIDRSFVAQLGTGPQAAVIVRAVLSLGRSLGMGVVAEGVETHAQMKFLT 773 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + +QGYL GRP+P+ D Sbjct: 774 EEACGEMQGYLFGRPRPITD 793 >UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Serratia proteamaculans 568 RepID=A8GHP9_SERP5 Length = 750 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 211/722 (29%), Positives = 373/722 (51%), Gaps = 9/722 (1%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 + + ++LI + ++SP ++ ++L ++PL +++L ++ WR + + + Sbjct: 24 RWWGYPLIWGLLLIPFAGWLSPRIMLPEGKVYLLYLPLAACIALLMVYDWRALPGITLAI 83 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAI-LRWQLGTRWRYGLT-SRYVWQRLFWLG 129 L ++ +++ S + L C + R Q RW V RL WL Sbjct: 84 MVRYASRLGL---ESGILVTSLYLLCLILCWLGYRSQTQRRWCAAPGVPTLVKARLIWLV 140 Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 ++ + + L+ + P ++ G++D + +V+ +L L LFY++ R+ Sbjct: 141 VLPALLFVFGLKLLVALAQLPDELGMMPGNSDYLLALVNFQALLLGCLSAMPLFYFMLRL 200 Query: 190 IVSPHFAQILWRR---DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 + P FA LWRR ++AP K++ + L L ++ LL + GY + + Sbjct: 201 LNKPRFALTLWRRFGREMAPQADKKELSLWLLVLVSMVALLSYYAKNSNPLLLGGYGLIL 260 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + G + Y F + W+ S L L + + Q ++LA I ++++ F++C+ Sbjct: 261 LLPVMLYGAMRFGYQFNCIIWSSSLLVLFFHYPGYAQRDNLLHNLAVISSMMVVFTLCIY 320 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRH 366 M + R + R AL DP+ LPN RAL++ + C LR+ L+ +SR+ Sbjct: 321 LMSALNTRQRLSHARAQSAALQDPVIGLPNLRALKRDLTLSLPSTLCFLRVSELDLLSRN 380 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQI 426 YG+ +R+ + + L ++ E +Y LPG +LLL + G ++E ++ + + L ++ Sbjct: 381 YGMQLRIRFKQQLAALLHQVLAPGEGVYHLPGYDLLLRVDGEDSEEKVLQIYHALEKFRL 440 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 WN L G + + + E L LLG+LS LAE S ++ + + V + Sbjct: 441 IWNGLPLHPPLGLGYCSVNADFEHLYLLLGELSSLAEVSLTSGKPESVQNGGQWVQEEIK 500 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY-DEILARLKYDGGIMTPDKFLPLIAQF 545 ++V LL+ ++ ALD +L AQPI G+ Y + +L G I++P+ FLP+ +F Sbjct: 501 RKVELLHGVQHALDNDGFILMAQPIVGLRGDRYHEILLRMRDTCGEIISPNDFLPVAHEF 560 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L+ R DL VL + LK++ + + RF+VNL P +L + + + L ++Y I P Sbjct: 561 GLAYRLDLWVLRNTLKFMDLYRAELPSARFAVNLSPSSLCRPMLRHDVNSLLEQYQIEPY 620 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE + + N++ L + G RIA+DDFGTGYA+Y+RLK L D++KIDG Sbjct: 621 QLTLEVTESHLLQDTAYAGANLQALREIGCRIALDDFGTGYASYDRLKMLPVDMLKIDGS 680 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+D++TN +D ++ SI +A+ K L++VAE+VE+ +Q L +GV Y+QGY IG PQ Sbjct: 681 FVRDMLTNPVDFQVITSICKVARMKRLAIVAEYVESMEQLVALKGVGVDYMQGYFIGEPQ 740 Query: 726 PL 727 PL Sbjct: 741 PL 742 >UniRef50_C4ZNG3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNG3_THASP Length = 905 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 101/581 (17%), Positives = 193/581 (33%), Gaps = 39/581 (6%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL--SWLAALSVLLLLLCTPYENDF- 238 + +T M FA + R+ +E +A +++ P Sbjct: 322 MTGLITEMAEDVAFALANFEREARRQRAEEAARLLGRAVEASANGIMITDARQPGNPLIH 381 Query: 239 -------IAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 I GY F +G L+ + AV + + Sbjct: 382 VNKAFERITGYSAAEALGRNPGFLVGADPLQRGLAEVRAAVKAQREAEVVLRSHRKDGSP 441 Query: 289 YSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + LA + + ++ Q DP+T L N L Sbjct: 442 FWNELSLAPVRDSAGTVTHFVGVINDISERIAYEEALERQNNEDPVTGLANRNLLRDRVG 501 Query: 346 QEAGKSFCCLRID------------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 Q + R D N + ++ G ++ I + + + + Sbjct: 502 QAIAFA----RQDGRALVLLLLDLDNFKRINDSLGHDAGDQALKEIAGRIRDCVDACDTV 557 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQET 450 ++ G E +++L+ + + + + + + F + + Sbjct: 558 ARIGGDEFVVLLTDLAGAQAASLVAGRILRAIGQPLIVLGREIKISASIGASVFPDDDDG 617 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL ++ A ++ + +++ + +R A+ Q +L+ QP Sbjct: 618 FEALLRNADAAMYRAKDAGRN-AFHFYTADMNAEAVRKLEMEGRLRQAIAQDGFVLHYQP 676 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + ++ +G I P +F+PL + + VL + + Sbjct: 677 VHEAAGARMVAAEALVRMRDENGTITPPGEFIPLAEETGMILALGRWVLLAACREARRWL 736 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + + +VNL + +A I + + + LEITE + + + Sbjct: 737 DLGREMQVAVNLSARQFNDEGLAAHIRHCLAAAGLPARLLKLEITESMVMRDVGQAARVL 796 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L +++DDFGTG+++ L+R D +KID FV+D + A IVR I LA Sbjct: 797 STLKALDVSVSVDDFGTGHSSLACLRRFPLDQLKIDRSFVQDAAQDEDSAAIVRGIIALA 856 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L VAE VET +Q L G LQGY RP Sbjct: 857 GSLRLQTVAEGVETAEQVGFLRSAGCDLLQGYYFSRPLEAD 897 >UniRef50_Q2BRN8 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRN8_9GAMM Length = 690 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 93/469 (19%), Positives = 179/469 (38%), Gaps = 32/469 (6%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + Y ++ + + + + + + + + + A DPLT L N R+ Sbjct: 194 RKNGSTYWSLQNISPIHDELGNIINFVSVSEDISQIKEHDAQMEKMAYYDPLTNLGNRRS 253 Query: 340 LEQAPEQEAGKSFCCLR------ID--------NLEFMSRHYGLMMRVHCIRSICRTLLP 385 + +Q L ++ + + ++ G + +I L Sbjct: 254 FRRTLDQ-------YLDSPQEQGLNALLLLDLDHFKQINDTMGHEAGDALLTTIASRLNF 306 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWG 442 ++ +++L G E ++ + N L ++ IH + + Sbjct: 307 CTRQRTSVFRLGGDEFTIIFRNCNDRTHVIERTNEVLSLLAQPIHIGPHEISITVSIGIT 366 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + LL + E+ + + + + + + +R+ALD Sbjct: 367 LIGLDSPDASDLLRNADLAMYYAKKSGRN-TFAFYEQHMDEEAQRTLSIEHDLRSALDGN 425 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 L L QP N + + +L G + PD+F+P + L V+ Sbjct: 426 QLRLVYQPQISADNGKITAIEALLRWDHPLDGPIPPDEFIPHAEETGLIIPIGRWVMAEA 485 Query: 560 LKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 K + VNL + I + + P+ + LEITE Sbjct: 486 CKAAKAIQDLGLPPIKVCVNLSTRQFDDPALISHIEEAIETSGLDPRWLELEITESMLMR 545 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + +++ + + + G +AIDDFGTGY++ LK++ D++KID F++DI ++ + Sbjct: 546 DMSTAIDILNSIKQKGISLAIDDFGTGYSSLSYLKKMPVDLLKIDRSFLQDIPSDRDNMA 605 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 I +I + K LSVVAE VE Q Q A L++ +QGYLI +P L Sbjct: 606 ITSTIIAMTKQLGLSVVAEGVENQAQMAFLNRNQCTLMQGYLISQPVSL 654 >UniRef50_UPI0001850D38 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850D38 Length = 446 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 86/432 (19%), Positives = 173/432 (40%), Gaps = 15/432 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMS 364 + A DPLT + N + + + + +D + ++ Sbjct: 2 IVELLKVQTDLEYLAHFDPLTNVYNRNYFIDKFKDFVFYADDKDEMALLFIDLDRFKIIN 61 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + ++ + L+ + +E + +L G E ++++ + + + Sbjct: 62 DMLGHLEGDTVLKGVAERLMNVCKEENVIGRLGGDEFIILVPKIRHMDDVLILAQNIINT 121 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 S + F + + +Q L+ + ++ + Sbjct: 122 LSLPYKLKGGEYYITASVGISVFPQDGDDIQTLIKNADIAMYSAKERGKN-NYQFFDDAI 180 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + +V + +R A+++ +L L+ QP N + EG + ++ + G ++P F Sbjct: 181 KEKIVSKVQIEQELRHAIERNELELHYQPQVNIQTGKIEGVEALIRWMSPTLGFVSPATF 240 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + +LE+ K SVN+ + + + + Sbjct: 241 IPIAEDSGMIMEIGNWILETAAKQAKVWHDMGYSELTMSVNISMIQFMNPTLIQSVNHAL 300 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + ++P + LEITE A S E + +L + A+DDFGTGY++ LK L Sbjct: 301 NKSSLNPSFLKLEITETVAMSEPELVREILLRLKELNIEFALDDFGTGYSSLNYLKNLPV 360 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 DI+KID F++DI + D IVR++ ++A + + V+AE VET Q + L ++ LQ Sbjct: 361 DILKIDRSFIQDIDIDKNDFTIVRALIEVAHSLGMLVIAEGVETTSQLSKLGEVNCDMLQ 420 Query: 718 GYLIGRPQPLAD 729 GY+ RP P + Sbjct: 421 GYVFSRPLPANE 432 >UniRef50_Q5P4J2 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4J2_AZOSE Length = 948 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 102/598 (17%), Positives = 201/598 (33%), Gaps = 27/598 (4%) Query: 156 FFGDADAIFTVVDLL------SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 + F + + +I L ++ + S + + A Sbjct: 337 LLPPLASGFVLARTQLWIPPAAATIGFIIGY-LGWFAVDLRRSRRGLRHARQDADATLRS 395 Query: 210 KEKRAFTLS--WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 T+ L + T + FT ++ Sbjct: 396 IADAVVTVDDDCRIVLMNPVAERLTGLPLAGAQQRRLGELLDTFTEQRAQIDETLGVCLQ 455 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + L + T +L ++ + + + + R +A Sbjct: 456 Q-RRMIRLPEPIAWRMPDGTVCALRLTISPIGERAEGAVLAFNDVTEALAATSRLEHEAT 514 Query: 328 TDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN L + + + +D + ++ G + + Sbjct: 515 HDTLTGLPNRALLLDRLHHALAQADRRCTMIALLFVDLDRFKRINDSLGHHAGDRVLEIV 574 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWN-NTGLDM 435 L ++ + + + G E ++++ + + + + + L R + T L + Sbjct: 575 AERLTAAVRGGDTVARWGGDEFVVLMENLDDQPAVAAIAHKMIELLERDVEAEPGTNLAL 634 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G + LL ++ + ++ + ++ + + + Sbjct: 635 SCSIGIGVGPRDSADAGTLLLMADRAMYRAKRQGGG-SYTFYSPEMNTWSRDRLKMESAL 693 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL + L+ QP + G + ++ + DG ++ PD F+P + L Sbjct: 694 RAALQNREFELHYQPQIDIRSGRLVGLEALIRWRRADGELIRPDAFIPAAEESGLIRGIG 753 Query: 553 LQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ A + +VN+ N+ I + ++P + +E+ Sbjct: 754 DWVIREATSQAARWKSEGLLPVPLAVNVSAQQCSDMNVVDTIRSALEDSGVAPAMLKIEL 813 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE A +AE + + + G +A+DDFGTGY++ LKR +KID FV DI Sbjct: 814 TESTAMHDAERVAELLSSIDRLGVGVAVDDFGTGYSSLSLLKRFPISELKIDKSFVHDIT 873 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ DA IVR LA + ++VVAE VETQ Q L + QG L P P + Sbjct: 874 SDADDAAIVRGTIALAHSLGMTVVAEGVETQAQLRFLARHRCNIAQGLLSSPPLPADE 931 >UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVS6_9PROT Length = 829 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 94/442 (21%), Positives = 168/442 (38%), Gaps = 19/442 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCL 355 + + + + AL D LT L N + Q A + L Sbjct: 377 IAGSMTDVTERKRAEEQAIHDALHDSLTGLANRTLFLERVRQALARQRRSLSAQFAVIYL 436 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG--- 412 +D + ++ G + I + R L ++ + + +L G E ++L + Sbjct: 437 DLDRFKVVNESLGHVHGDDLIIAAARRLEQNLKFGDTVARLGGDEFAIMLEDVHDKEEGT 496 Query: 413 RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 L M+ S + N + +L ++ Sbjct: 497 ALSEMLQKALSTPFVLGGKEVFTTASMGIAHSTDNYVRPEDILRDSELAMYRAKELGKAR 556 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 ++ + + G T + + +R ALD+ +++L QPI + G++ + + Sbjct: 557 SVAF-DPAMRGTTVTPLDVETDLRRALDRNEMILNFQPIVSLADGRIRGFEALSRWRHKE 615 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQ 586 G + P +F+P+ + + VL + + + SVNL Q Sbjct: 616 RGDIPPSEFIPIAEETGMIVELGQWVLRNACAQMVEWNKEFPDQGPFEISVNLSGRQFTQ 675 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ + + + LEITE NA+ S + L ++ +DDFGTGY Sbjct: 676 LDLVKMVTNSLDGTGLDASFLKLEITESALMENAQRSAQMLRHLKDLHIKVCVDDFGTGY 735 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L + D +KID FV+D+ N + IVR+I LA+ L V+AE VET +Q A Sbjct: 736 SSLSYLHKFPIDTLKIDKSFVQDMGRNRHNLEIVRTIAVLAQNLRLDVIAEGVETPEQLA 795 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L +G Y QG+L RP Sbjct: 796 QLRAIGCGYAQGFLFSRPLTAD 817 >UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Actinomycetales RepID=A0LUZ3_ACIC1 Length = 949 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 133/740 (17%), Positives = 249/740 (33%), Gaps = 48/740 (6%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT 74 TL V+L + + FLA + + + + + P+ G + Sbjct: 187 TLHAIAAVLLGTAAIAAIARCRLEGDIPFLALFLIGAGVIVCELGDLFSLRPLALGEWSP 246 Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 ++ L+ V+ + T R L + + L V P+ Sbjct: 247 RHPSYLLAVAGRLVLGLAVL-------------SRTAERADLVQLRRREYIAVLTPVLPV 293 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 S+ + + L+ +T ++ + L+R + Sbjct: 294 LAVGSLLIAAAVMRVSLRPATLILLGVLGILLLLAWLAARLDQLL------LSRTLEHRV 347 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 + L R A + + ++ TP + + F Sbjct: 348 VERTLALRTHAKWFRSLVQNSSDIITIVDPSGVIRYQTPSATRVLGYDPNAMVGQRFVSL 407 Query: 255 VGKL-RYPFLNLTWAVSTLCLLNYNQNFLQGVE----TEYSLAFILAVLISFSVCLLYMV 309 V + + + F E V L+ Sbjct: 408 VAPADVHRLEAILLDAVLRPRSTHTIEFAMRHAAGHWRETETVITSLVDDHDIRGLVLNT 467 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLE 361 R + L R+ QA +DPLT L N E + L +D + Sbjct: 468 RDVSERKELERQLTRQAFSDPLTGLANRALFANRVEHALSERSRQPGEVAVLFLDLDGFK 527 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG---RLQHMV 418 ++ G + H + + L ++ ++ + +L G E +++ GP+ E + V Sbjct: 528 GVNDAQGHAVGDHLLTLVADRLRRCVRPSDTVARLGGDEFAILVVGPQAEAHGVDVAERV 587 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + + + D ET+ LL ++ + + R Sbjct: 588 QRALAEPFLLSGREVTLAASIGIAVTDDGTETVDQLLRNADLAMYRAKSSRKGTYVRFRT 647 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 + +V +R AL + +L+L+ QP N + G + ++ G++ P Sbjct: 648 -EMHDALLARVQTETDLRHALSRRELVLHYQPTVNLRTGQVVGVEALIRWYHPTRGLIQP 706 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGR 592 F+ + + L + + A + +VN+ L + Sbjct: 707 MDFIGMAEETGLVESIGAWAIRECCRQGARWQRYAQPGGVFHVAVNVSGRQL-HPRLPDI 765 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + P A+++E+TE +E ++ + QL FG R+AIDDFGTGY++ L Sbjct: 766 VRTALTETGMPPGALVIEVTENILVKRSEEAIAVLRQLKSFGVRVAIDDFGTGYSSLSYL 825 Query: 653 KRLQADIIKIDGVFVKDIVTNTLD----AMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 R D++KID FV+ I T+ +VR+I L +A L VAE +ET++Q A L Sbjct: 826 ARFPVDVLKIDKSFVEQI-TDRNSGTEGTELVRTILHLGRALRLGTVAEGIETREQYAAL 884 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 + Y QGYL RP P Sbjct: 885 LAMSCDYGQGYLFSRPLPAE 904 >UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Rhodopseudomonas palustris RepID=Q2J3Q8_RHOP2 Length = 743 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 119/574 (20%), Positives = 213/574 (37%), Gaps = 39/574 (6%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL---AALSVLLLLLC--------TPYE 235 R+ ++ R L R LS L AAL+ L LC Sbjct: 160 LRLANRRLAREVAERERTENHLRSMSRTLELSNLRLDAALNNFLHGLCMFDGDRKVVVSN 219 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLR-----YPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 F Y + I + + ++ +W+ L + + + + ++ + Sbjct: 220 ARFAGIYSLRPDEIRCGVSLSAIQSACRERGTFVESWSERRLGRCSDDISEVSSLQDGRT 279 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA------- 343 + + + + ++ A D LT L N A + Sbjct: 280 ILVRCQPVAGGG--WMTVHEDITERYRSEQQIAHMARHDLLTGLLNRGAFHERMDEACAR 337 Query: 344 -PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 S L +D + ++ G +R++ L ++E + L +L G E Sbjct: 338 LRRWGETFSVIMLDLDRFKLVNDSLGHPAGDALLRAVVSRLKACIRETDVLARLGGDEFA 397 Query: 403 LVLSGP-----ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++ + E +VN L I + L + A + L+ Sbjct: 398 VLQTRTKDSYNEAVAFADRIVNCLID-PIEIDGHQLVISTSAGIALAPQHGTDSDELIKN 456 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NK 514 ++ A + E + + + L +R A+ + LY QP + Sbjct: 457 ADLALYRAKAAGRN-GYVTFETAMKDRANARQQLEGELRQAILNREFDLYYQPQVEARSG 515 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 G + +L G + P +F+P+ + L + VL+ P + Sbjct: 516 RVIGAEALLRWRHPRRGFVPPSEFIPVAEETGLIEKLGEWVLKEAAAEAIRWPA---PIK 572 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++NL P+ L + N+ + + + + P+ + +EITE + +++ I QL G Sbjct: 573 LAINLSPVQLSRGNLTDTVTQALRLSGLPPERLEVEITENVFLEDEVNNLAVIRQLRSLG 632 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +A+DDFGTGY++ L R D IKID F +++ + A IV S+ LA+ +S Sbjct: 633 VSVALDDFGTGYSSLSYLTRFPFDQIKIDKFFSMNLIERSDCATIVSSVITLARGLGIST 692 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VAE VET +Q LL + GV Y QGYL G P P + Sbjct: 693 VAEGVETVRQFELLREAGVDYFQGYLFGHPVPAS 726 >UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1U8_SHEAM Length = 1069 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 94/458 (20%), Positives = 190/458 (41%), Gaps = 17/458 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ- 346 EY ++ V + + R + + +A D LT LPN + L + Sbjct: 592 EYLAITLVRDDEGQIVHHIGLFMDISRRKQYEQDIWYKANFDTLTDLPNRKLLSERLGHE 651 Query: 347 -------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D ++++ G ++++ + L +M + + +L G Sbjct: 652 LKMAEHDGRKLAVMVLDLDRFKYINDTQGHDCGDLLLKAVAKRLQTVMGSTDFIARLGGD 711 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++VL E ++ L + + G + + ++ LL Sbjct: 712 EFVIVLPRLAQEHAVEQYAKRLLQSMGDPFKVEQGSMSVSASLGIGLYPQDGLDVETLLS 771 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 + + ++ +++ + +R A+ + L+ QP+ + Sbjct: 772 NAETAMYGAKDEGRNH-FKYFTQEMNLALIERLGMERDLRRAVANDEFCLFYQPVVDMES 830 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 E + +L + G+++P +F+P+ L V++ L LA G Sbjct: 831 GEVTSLEALLRWQDPEQGLVSPVRFIPVAEDMGLMGELGQWVMDKALADLARLHTLGFGL 890 Query: 574 RFSVNLMPLTLL--QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 ++N+ ++++ ++ R+ I+P+ + +EITE N+ + + + Sbjct: 891 SMAINVSACQCHCKRQSLDEQLRSALSRHGIAPRHLHVEITESLLLDNSHHCLDTLNNIR 950 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G I +DDFGTGY++ LK+ IKID FV+ + DA +VR+I +++K+ Sbjct: 951 DLGCAIYLDDFGTGYSSLSYLKKFPISAIKIDKSFVEQLPGCESDASLVRAIVNMSKSLG 1010 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +VAE +E++ QQA L LG Q+ QGYL RP P + Sbjct: 1011 MKLVAEGIESKDQQAFLQALGSQFGQGYLYSRPLPFEE 1048 >UniRef50_Q07ZQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=21 Tax=Shewanella RepID=Q07ZQ2_SHEFN Length = 1451 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 98/441 (22%), Positives = 175/441 (39%), Gaps = 12/441 (2%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----EAGKSFCCL 355 + + + R + D LT LPN +L+ + + L Sbjct: 990 GETSHYVGVFSDITRRKQQEEELRKLTNNDLLTGLPNRSSLQVTLSNLVKKDVHHTLMVL 1049 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +DN + ++ G + + + + + ++ LY+L G E L++ G Sbjct: 1050 DLDNFKRINDSLGHQIGDDLLIGVAERIKLAIPKHASLYRLGGDEFALLVDQHPDIGSCA 1109 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + NN L +G + +++ Q LL + + + Sbjct: 1110 AIATQVINCLKPAFTLNNDSLVLGISIGIVLYPEDEQNEQALLRKADIAMYHAKSGGGNR 1169 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 E ++ +Q+ + + IR AL +Y QP + G + ++ Sbjct: 1170 -YQFYSESLNQNALRQLEIESLIREALKDDLFEVYYQPKIDVKKDRLNGMEALVRLNHPK 1228 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G++ P++F+PL + L VL R +VNL + Sbjct: 1229 LGLIGPNEFIPLAEENGLIVEIGDVVLRKACFAAQKWLELGLFSGRVAVNLSSRQFALPD 1288 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + RI + + + + + LEITE + E ++ ++QL K G +A+DDFGTGY++ Sbjct: 1289 LQQRIESILRLTKLPAKHLELEITEGTVIKDPEQAIKVMQQLAKMGVSLALDDFGTGYSS 1348 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR + +KID FV DI + D +V SI +A L+VV E VE Q +L Sbjct: 1349 LSYLKRFPINCLKIDKTFVDDIDKSDRDLKMVDSIITIAHNMGLTVVGEGVEQTAQLNIL 1408 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 L + +QGY+ +P AD Sbjct: 1409 KALNCEEIQGYIYSKPIREAD 1429 >UniRef50_B6BNN5 Ggef/eal/pas/pac-domain containing protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNN5_9PROT Length = 835 Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 90/439 (20%), Positives = 169/439 (38%), Gaps = 16/439 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRI 357 + V+ + + A D LT N L + + L + Sbjct: 392 IGTVQDITERKQYENKLERLANFDTLTGFANRTFLFSYLQKVVHRCKRNNKIAALLVLDM 451 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ YG + + I + L ++ + + +L G + ++L Sbjct: 452 DHFKDINDSYGHDIGDELLALIAKRLSTRIRGGDFIARLDGDKFAIILEDINNSDDAAMF 511 Query: 418 VNILNSR---QIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + +NT + + A N ET + L+ + Sbjct: 512 AKEIMEEVEKPFYLSNTSEVHICSTAGIVIAPENAETAEELIQFADTALYKGKKDKRG-G 570 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + + ++ K + L +R A++ + LY QP +K G + ++ Sbjct: 571 ISYYSDELTELAKKHIELATRLRRAIEHSEFELYYQPQVHIKSKRIVGAEALIRWNDPIH 630 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G+++P+ F+PL + L V+ + SVN+ L +NI Sbjct: 631 GLISPNDFIPLAEETGLIGAIGEWVIRDACRQGKLWIDKGYNLSISVNVSANQLRHQNIT 690 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I K + +++E+TE E ++ + + G R+AIDDFGTGY++Y Sbjct: 691 RLIDSTLKETGFTADKLVIELTESAVMQREEEAVAMLHAIRAKGIRLAIDDFGTGYSSYS 750 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR DI+KID F+ ++ D IV++I + A ++AE E +Q L + Sbjct: 751 YLKRFPIDILKIDKSFIDEVPFENDDMAIVKAIIAMGSALGYKILAEGTEHIEQIDFLEE 810 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G QY QGY +P ++ Sbjct: 811 HGCQYYQGYYKSKPLKTSE 829 >UniRef50_Q21ZG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=Q21ZG9_RHOFD Length = 731 Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 83/453 (18%), Positives = 165/453 (36%), Gaps = 17/453 (3%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------P 344 I + ++ + QA D LT LPN L Sbjct: 263 VISRDAQGLPLRMIGTHTDVTERKKSEALIWRQAHFDTLTGLPNRHMLRDRVAQEIKKSK 322 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +D+ + ++ G + R + ++E++ + ++ G E ++ Sbjct: 323 RDGLQLAVLFIDLDHFKEVNDTLGHNSGDRLLVEAARRISDCVRESDTVARMGGDEFAVI 382 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ L+ ++ + + + + + ++ L Sbjct: 383 LTELLDASSLERILQKILRALECVFQLDGEQAFVSASIGVTMYPLDAGDIEDLFKNADQA 442 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 + + +V L N + L L QPI + Sbjct: 443 LYVAKGAGRNR-FSFFTPALQQAAQNRVRLANDLHAGLIGQQFRLVYQPIVELASGAVCK 501 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSV 577 + ++ G+++P +F+P+ L V + + + + SV Sbjct: 502 AEALIRWQHPTRGLISPVEFIPIAEASGLIVAIGEWVFQQAARQVQAWRTALDPDFQISV 561 Query: 578 NLMPLTLLQKNIAGR-IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 N P+ Q+ + + + ++++EITE + S + LH G + Sbjct: 562 NKSPVQFYQRGKTKTPWAQQLQAMGLPGNSIVVEITEGLLLDTSSSVADQLLDLHDAGIQ 621 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +++DDFGTGY++ L+R D +KID FV+ ++ + D + ++I +A A + V+A Sbjct: 622 VSLDDFGTGYSSLSYLQRFDIDFVKIDQSFVRYLIPESTDLALCQAIIAMAHALGMKVIA 681 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET QQ+ LL G Y QGYL +P D Sbjct: 682 EGVETAQQRDLLAAAGCDYGQGYLFSKPVSAPD 714 >UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJP5_9GAMM Length = 1092 Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 95/460 (20%), Positives = 174/460 (37%), Gaps = 20/460 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 E + + + R + A DPLT LPN R L Sbjct: 619 ELQSITAVRDDQGRLTHYVSVFADISRLKASEAELDFLAHHDPLTELPNRRLLRARLAQA 678 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + + +D + ++ G ++ + L + + + +L Sbjct: 679 IALMRRRNGLLAILIIDVDRFKDINDSRGHAAGDRLLKIVADRLQAGQRGTDTVARLASD 738 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++ + + R + + ++ F + + LL Sbjct: 739 EFAVLADNLAHVDDAALVAEDILREVGRPVDLGDGVEFEIAATIGIAVFPDHGADAETLL 798 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 Q ++ + + +++ L +R A++Q L ++ QP Sbjct: 799 QQAGTALSRAKEDGRG-GYRYYSDAFTEAARERIDLNARLRRAIEQDSLEVHYQPQYRVS 857 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + G + +L + G ++P +F+P+ Q L VL +L Sbjct: 858 DGVLIGAEALLRWTDPELGPVSPGRFIPVAEQTGLIVELGDWVLRRVLAQGQAWRDAGYP 917 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R +VN+ L + I ++ L + + + + LEITE S+ E + +++L Sbjct: 918 AVRLAVNVSALQFQRVAIDHQVADLLEGHGYPAKYLELEITESALMSDPERARRILQRLR 977 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI---VTNTLDAMIVRSITDLAK 688 + G A+DDFGTGY++ +LKR D +K+D FV + + D I R+I L Sbjct: 978 ERGVSFAVDDFGTGYSSMAQLKRFPVDTLKVDKSFVDGLAAGAHDADDRSIARAIVALGH 1037 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LSV+AE VET++Q L +LG + QGYL RP P Sbjct: 1038 GLGLSVLAEGVETREQLGALRELGCDHYQGYLASRPLPAE 1077 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 171/442 (38%), Gaps = 20/442 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRI 357 + + + QA D LT L N + A + L + Sbjct: 563 VAQFSDITERKKSEKIIWKQANFDNLTGLSNRQMFHDQLLHEKNKAQRRGLNVGLLFLDL 622 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G M + + + L +++ + + + G E +++ G + ++ + Sbjct: 623 DRFKAVNDTLGHNMGDQLLIDVAQRLRNCVRKRDLVSRFGGDEFTVIIGGLKNTQSVERV 682 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + + + + E + LL + Sbjct: 683 AQKILCELAEPFLLGEQNVYITPSIGITFYPKDGEATEMLLKNADQAMYSAKEKGRN-CY 741 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 + Q + L N +R AL + L LY QPI + + ++ + G Sbjct: 742 HYFTNSMQEQVERGGQLANDLRYALKKNQLELYYQPIVALGTGQIRKAEALIRWHHPELG 801 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQ--KN 588 +++P +F+P+ + V +A + + + S+N P+ + + Sbjct: 802 MVSPAEFIPIAEETGTIVEIGDWVFRQAADQVAHWRREYQNDFQVSINKSPVQFREGGSD 861 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAES-SMYNIEQLHKFGFRIAIDDFGTGYA 647 I + L + QAV++EITE + + + G +++DDFGTGY+ Sbjct: 862 ITSWLEHLLAL-GLPGQAVVIEITEGLLLDGSSRIVIDKLLAFRDSGIEVSLDDFGTGYS 920 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L++ D +KID FV+++ ++ D ++ +I +A + V+AE +E ++Q+ L Sbjct: 921 SMSYLRKFHIDNLKIDQSFVRNLKVDSDDMILCEAIIIMAHKLGMQVIAEGIENEEQRRL 980 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G Y QGYL +P P D Sbjct: 981 LSAAGCDYGQGYLFAKPLPEKD 1002 >UniRef50_Q0A8D0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8D0_ALHEH Length = 1017 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 94/485 (19%), Positives = 194/485 (40%), Gaps = 19/485 (3%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCL-LYMVRIYHRSEWL 318 + A+ + + + T + +A + +V + ++ + Sbjct: 505 LEEIRSALRSRREAHAVIRNYRKDGTLFWNELFVAPVREDDGAVHYMVSVINDVTERKRY 564 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + D LT LPN L + + +D + ++ G Sbjct: 565 QAELEQRTHYDALTGLPNRNLLVDRLHQALLYARRSGRHVALLNVDLDRFQIINESLGHA 624 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILNSRQIH 427 +R++ L ++ + + ++ G E +VL+ + + + I Sbjct: 625 AGDQLLRTVADRLTAALRGFDTVARMGGDEFNIVLTELRNTRDAELLAGELQEALAPSIS 684 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + + F + + + L+ + S ++ + + E Q Sbjct: 685 VTGQDVFLSVSVGYTVFPDDGDGPEDLIRRASVAMHEAKRQGGGVIIRYSERSEPRQIN- 743 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L + ++ A+++G+L L+ QP + + G + +L G+++P +F+PL + Sbjct: 744 RLTLESDLQRAIERGELRLHLQPQVDLDTGAMSGAEALLRWEHPRHGLVSPMQFIPLAEE 803 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VLE++ LA ++N+ L + + ++ + + ++ Sbjct: 804 VGLIIPMGRWVLETVATQLAHWQQQGLPVVPVALNISARQFLHAELVEDVRQILEGHGVA 863 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + LE+TE N E ++ + +L G R+A+DDFGTGY++ LKR D +KID Sbjct: 864 PSLLELELTESLMARNPEVAVQILRELKAMGLRLALDDFGTGYSSLAHLKRFPIDTLKID 923 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV+ + + DA I+ + +A + L+VVAE VE + Q L + Y QGY R Sbjct: 924 QSFVRHVNEDGDDAAIINATIRMAHSLGLNVVAEGVEREDQLEHLKRQRCDYAQGYFFSR 983 Query: 724 PQPLA 728 P L Sbjct: 984 PLSLE 988 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 90/466 (19%), Positives = 176/466 (37%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + EY+ + + S L + + + + QA D LT LPN R Sbjct: 676 RKSGEEYAEWLAINNIYSEDGKLFRRVALFSDITEKKRADALIWNQANYDLLTQLPNRRL 735 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 +Q + + + +D + ++ G + + + ++E + Sbjct: 736 FSDRLQQEIKKSQHDHSQFALLFIDLDRFKEVNDTLGHSHGDYLLIEASHRIQRHLKETD 795 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++++ + + + + + + F + Sbjct: 796 TVGRLGGDEFTVIIANLPDPSVMTLIAQRVLDALAAPYDLEGEIVYLSASIGITVFPEDA 855 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T LL ++ + M+ ++ ++ +R AL +Y Sbjct: 856 TTSAELLKNADQAMYEAKKNGRNR-FSFFTPMMQAMAQARMRMMRDLRNALGLNQFTVYF 914 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + + ++ + G ++P +F+PL + L V + + + Sbjct: 915 QPIVDLSSQRIHKAEALIRWQHPELGFISPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQ 974 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGR-IIRLFKRYHISPQAVILEITEEQAFSNAESS 623 P + SVN P+ + A + + +S +++EITE + Sbjct: 975 CIPIVGDDFQVSVNKSPVQFRDRTQAHQDWMEYLSGLGLSGHNIVVEITEGLLLNADSGI 1034 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + G ++AIDDFGTGY++ LK+ D +KID FV+++ D + +I Sbjct: 1035 SDKLLHFRDAGMQVAIDDFGTGYSSLSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAI 1094 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L V+AE VET Q+ LL ++G Y QGYL RP P + Sbjct: 1095 ATMAHKLDLRVIAEGVETTAQRDLLAQIGCDYGQGYLFSRPVPAEE 1140 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 97/496 (19%), Positives = 178/496 (35%), Gaps = 25/496 (5%) Query: 256 GKLRYPFLNLTWAV-STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRI 311 G+ F WA + EY+ + + + + + + Sbjct: 201 GRHGPAFYQAMWAALEATGTWRGEIWNRRRNGEEYAEHLTINTIYDEAGKVHLRVALFSD 260 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + Q+ D LT LPN R L + + + +D+ + + Sbjct: 261 ITEKKASEALIEFQSCYDALTRLPNRRLLAERLALASERAHRDRGRVALLYIDLDHFKEV 320 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKL--YQLPGSELLLVLSGPETEGRLQHMVNIL 421 + G + + + ++E+E + +L G E +++ E ++ + + Sbjct: 321 NDTLGHHQGDALLVQVAHRVRRCVRESETVTVARLGGDEFTVIVPDFEGMDEVERLARAI 380 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 S + + F + LL + + Sbjct: 381 IDSLSEPFRLGDQLAHVSASIGITVFPDDAADTDGLLRNADQAMYAAKRAGRN-GYQAFN 439 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + + +V L +R A+ G L L+ QPI + + +L + G ++P Sbjct: 440 PEMQRAMSMRVRLSQALRDAVQAGQLRLHYQPIVELASGRVRKAEALLRWEHPEFGEVSP 499 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQ--KNIAGR 592 F+P+ V E A + S+N+ P ++ Sbjct: 500 AAFIPIAEDCGSIHCIGDWVFERAACQAARWRSRFGTDFQVSINVSPRQFQAGGRDFGRW 559 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + R + + LEITE ++ + Q G +IA+DDFGTGY++ L Sbjct: 560 LER-LGELGLDGSMLALEITETLLMDTDQAIADKLAQFRAAGVQIALDDFGTGYSSLAYL 618 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K + D +KID FV+D+ ++ ++ +I +A L V+AE VET QQ ALL ++G Sbjct: 619 KEFRIDYLKIDRTFVRDMTPDSKSFLLSEAIVTMAHRLGLKVIAEGVETPQQYALLERIG 678 Query: 713 VQYLQGYLIGRPQPLA 728 Y QGYL RP P Sbjct: 679 CDYFQGYLFSRPLPED 694 >UniRef50_Q1Q7M3 Similar to ScrC (Sensory box/GGDEF family protein) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7M3_9BACT Length = 736 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 82/436 (18%), Positives = 166/436 (38%), Gaps = 16/436 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCL 355 + + + H QA D LT LPN + E+ + + + L Sbjct: 276 GVYAIAHDITERKEAKEYIHFQACHDLLTKLPNRTSFEKRGRLAISKARQNDCIVAVLFL 335 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + ++S+ + L +++ + L + E +L+L + Sbjct: 336 DLDRFKIINDSLGHAVGDQLLQSVTQRLESCLRKCDILSRFGADEFMLLLPEINAPENAR 395 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + F + ET++ L+ Q+ Sbjct: 396 QVALKITDIMHTPFVIGDQEIFGDVSIGISFFPEHGETIEQLIQNAEIAMYQAKCRGKK- 454 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + ++ + ++ + +R AL + + QP + G++ ++ + Sbjct: 455 GIQFFDKGMKTSGPHRLAMERDLRRALKNNEFEIVYQPQITINTGKVIGFEALVRWNHPE 514 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN 588 G + P +F+P+ + L VL + R S+N+ PL + + Sbjct: 515 KGKIRPSEFIPVAEETRLIEDLGEWVLHHACCEVREWIKKGHDTIRLSINISPLQIENPH 574 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + +E+TE ++ E + LHK +AIDDFG GY++ Sbjct: 575 FVENFVHMLGICQFPGKNMEIELTESILMTDLEHMAQILNHLHKHSITVAIDDFGIGYSS 634 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 +++L +KID F++ I T ++ +V +I + K L VAE VET Q L Sbjct: 635 LSYIQKLPIHTLKIDQSFMQSIQNETDESCLVNAIIAMGKGLHLCTVAEGVETMTQIKYL 694 Query: 709 HKLGVQYLQGYLIGRP 724 G +QGY G P Sbjct: 695 QNQGCDAVQGYYFGEP 710 >UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBN5_METSD Length = 782 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 123/714 (17%), Positives = 254/714 (35%), Gaps = 53/714 (7%) Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 + + +LG ++ V C ++ +G W + Sbjct: 57 ASFILTWIGYRQAYPEQREPRRWFLLGIGSYFVGQLCWDIQSAIG--WNPFPAPADFFYL 114 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDF-PLKISTFFGDADAIFTVVDLLSLFTA-VLIYNML 182 + + + ++L + L ++ + ++ L + L +L Sbjct: 115 MLGPCCILGLLSALKLHLSHAKLTAAKLDMAVMTIAVIGLILLIYLGRQSDSNALQLLVL 174 Query: 183 FYYLTRMIVSPHFAQIL---------WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 +Y ++ + FA +L W + + + W + + + + Sbjct: 175 VFYPAGLLSAACFALLLVPFLRLRLQWGWLLLLGGLALEGGIWMQWNLNVIDQVNIDGSL 234 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST---------------LCLLNYN 278 + F A L+ + + + ++ + + +++ Sbjct: 235 LNHVFSASDLLLGLGAMHWMATSSSNHTYIRICQGIQRAIPLMAMLIAISTIYFMMMDTT 294 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR---RWHLQALTDPLTLLP 335 + + L+ I ++ S+ L R+ + + R+ A D LT LP Sbjct: 295 TPIAKSIALGSCLSIIALAMVRQSILLAESERLLTAEQLIEEGQMRYQHLAHHDILTGLP 354 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + + ID+ + ++ G ++ + +I L + Sbjct: 355 NRLLFQDRLTHALALSARNNNRVGMLFIDIDHFKNINDSLGHVIGDELLVAIVERLKLRI 414 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNT-GLDMGYGAAWGR 443 +E + +L G E +L++ + + + L H + + + Sbjct: 415 REQDTFARLGGDEFVLLIEQLQNASEAATIASNLLEALKTPFHLSGNCEVVISASIGISV 474 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + L+ ++ E ++ + ++++ + +R A+ Sbjct: 475 CPEDTQDATQLIRNADSAMYRAKDTGRNR-YQFYTEELTQRAQERLMTESRLRQAIRDKA 533 Query: 504 LLLYAQPIRN-KEGEGY------DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +L+ QPI E G + ++ + DG ++ PD F+P + L VL Sbjct: 534 FVLHYQPIYTKGEDGGAPSIFSCECLIRWQQDDGSLIYPDLFIPCAEETGLIIPIGEWVL 593 Query: 557 ESLLKWLATHPCDKKG--PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 + LA +VN+ N + + KR+ I+P +I+EITE Sbjct: 594 DHACAQLAEWDARLPDNTLSMAVNISARHFCDANFVMTVHEVLKRHAIAPARLIIEITEN 653 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + ++ +E L + G RIA+DDFGTG+++ +LK L +KID FVKDI +T Sbjct: 654 AVMDRMDIAIPTLETLVRTGVRIALDDFGTGHSSLAKLKTLPIHALKIDREFVKDIPDST 713 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D + SI +A+ L VAE VETQ+Q L + G QGYL+ RP Sbjct: 714 DDMQLAASIIRMAQGLHLQTVAEGVETQEQYDFLAQAGCDKFQGYLLSRPVTAE 767 >UniRef50_C6P797 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P797_9PROT Length = 830 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 166/442 (37%), Gaps = 19/442 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 L + + + QA DPLT LPN R + E + + Sbjct: 379 LTGVSQDITEKKRSEETIWQQANFDPLTGLPNRRMFQDRLEHEIKKSNREGLPLALMFID 438 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + + + ++E++ + +L G E ++LS + ++ Sbjct: 439 LDKFKEVNDTLGHDKGDILLVEAAQRISGCVRESDTVARLGGDEFTVILSELDDANSIER 498 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + + L+ L+ S + Sbjct: 499 IAQAIIQALVAPFLLAEEVAFVSASIGITLYPNDAPNLELLMSNADQAMYASKSAGRNR- 557 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + ++ L+N +R AL + L+ PI + + ++ Sbjct: 558 FSYFTPSMQAAALNRMHLINDLRDALSRNQFRLHYHPIVELSSGNIHKAEALIRWDHPVR 617 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTLLQKN- 588 G++ P +F+ L + + V ++ L + SVN P+ + Sbjct: 618 GLINPAEFVALAEESGMIVEIGDWVFRESVRQVLRLREEHHPEFQISVNKSPIQFRNDDR 677 Query: 589 -IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ + + + +EITE ES + L G ++A+DDFGTGY+ Sbjct: 678 YFRDWLPH-LQQLGLPGECITIEITEGLLLDATESVQAKLLDLRDAGIQVALDDFGTGYS 736 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ D IKID FV+++ + D ++ +I +A L V+AE +ET Q+ L Sbjct: 737 SLSYLKKFDIDYIKIDRSFVRNLTATSDDMVLCEAIIVMAHKLGLKVIAEGIETATQRHL 796 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G Y QG+ RP P + Sbjct: 797 LTAAGCDYGQGHFFSRPLPSHE 818 >UniRef50_C6BM04 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Burkholderiaceae RepID=C6BM04_RALP1 Length = 902 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 110/638 (17%), Positives = 227/638 (35%), Gaps = 39/638 (6%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 ++ +RL V IG+ + + P + + L Sbjct: 268 YRTVSGTDGVERLLGYHHVPEIGLYFLVGESIASILAPYEA----------YRRTALAGA 317 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW---LAALSVLLLL 229 + L+ +L+ L R + R + + + ++ + Sbjct: 318 IGSTLLMALLYATLRRSMSQRKQHIDEMRLASLVYASSSEAMMVTTLDGTVIDVNPAFTV 377 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 +F + + V + AV+T + + TE+ Sbjct: 378 TTGYTAQEFKGQHSDAIRSECNDSAV------VDTMRTAVTTKGTWSGEYLIRRKDGTEF 431 Query: 290 SLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + + + ++ + QA D LT LPN Q Sbjct: 432 PALLTVDTFAGHKLGAPSRVALIHDITEKKRAEEVIWRQANFDTLTELPNRHMFYAKLRQ 491 Query: 347 E--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 E + + +D + ++ G ++ I R + +++ + + +L G Sbjct: 492 EILHARQAATAVALLFIDLDRFKEVNDTLGHDQGDVLLKEIARRISAIVRGTDTVARLGG 551 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++L G ++ L +R + +++ + + + + LL Sbjct: 552 DEFTIILPNLPDAGAAAPIIRSLLARIATPVQLGEESVEVTASIGLALYPRDADNAESLL 611 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE 515 + + + + +++ + + +R A++Q L ++ QPI + Sbjct: 612 VRADQAMFAAKSAGRNQ-WSVFTPALQRAEQERLRITSDLRIAIEQKQLAVHYQPIVDLR 670 Query: 516 ---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKK 571 + ++ G + P F+P+ + L + VL L + + Sbjct: 671 SGAINKAEALIRWTHPVRGEIEPADFIPVAEETGLIVQIGKWVLNEALTEVTRWHTVLGR 730 Query: 572 GPRFSVNLMPLTLLQKN-IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + SVN P+ + + KR I P ++++EITE + + ++ +L Sbjct: 731 HMQVSVNKSPVEFRAAGQLGDSWADVVKRRAIRPGSLVIEITEGALMEGSAEVVDHLTRL 790 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G IA+DDFGTGY++ LKR D IKID FV+ + + D + +I +A A Sbjct: 791 RQAGIEIALDDFGTGYSSLSYLKRFDIDYIKIDQSFVRSLAHDPKDIALCSAIVSMAHAL 850 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + V+AE +ET++Q+A+L G Y QG+L P P A Sbjct: 851 RIKVIAEGIETEEQKAILVAAGCDYGQGHLFCPPVPPA 888 >UniRef50_A5V028 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A5V028_ROSS1 Length = 892 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 90/481 (18%), Positives = 169/481 (35%), Gaps = 22/481 (4%) Query: 270 STLCLLNYNQNFLQGVET---EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + L + + ++ + +R A Sbjct: 403 RLITSFEHEYRILHRDGAYRWMRCRGIAIWDADGNAAHIVGSQTDITDRKLAEQRLWYNA 462 Query: 327 LTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 D LT L N + L +D + ++ G ++ + Sbjct: 463 FHDSLTGLANRARFMDRLGHVIARARRSASPPYAVLILDLDRFKLINDSLGHLVGDQLLI 522 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 +I R L ++ + L L G E ++L ++ + H N + Sbjct: 523 AIARRLEQSLRPGDTLAHLGGDEFAVLLEDLSEPHAAVNVAERILHLFEEPFHLNEHEVF 582 Query: 435 MGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 D + +L + + + ++ + Sbjct: 583 SSASIGIALSDNLRYHSPSDMLRDADTAMHHAKMEGRAR-YAVFHPTMHDRARPRLQIEI 641 Query: 494 TIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R +++ + + QPI + G++ +L GI+TP +F+ + + L Sbjct: 642 DLRRGIERNEFFVVYQPIVELSTQRTVGFEALLRWRHPQRGIVTPAEFIAIAEETGLIVP 701 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFS--VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VL + L+ + +NL P + ++ R L Y + A+ Sbjct: 702 IGQMVLREACRQLSAWKQRHPERTLAMNINLSPRQIADPDLVHRTAALIDEYRLDADALR 761 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE + +++ ++QL G +I IDDFGTGY++ L R IKID FV Sbjct: 762 LEITETAIIEHGDAAGRVLQQLRALGVQICIDDFGTGYSSLSYLHRFPIATIKIDRSFVS 821 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I + + IVRSI LA++ ++V+AE ET++Q L + Y QG+L A Sbjct: 822 QIHRSHENTEIVRSIISLARSLGMAVIAEGTETEEQLLRLRSMSCAYGQGWLFAHALEPA 881 Query: 729 D 729 + Sbjct: 882 E 882 >UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYR2_RUBXD Length = 754 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 97/515 (18%), Positives = 183/515 (35%), Gaps = 21/515 (4%) Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + D + F + +L LN + + Sbjct: 231 LGWREDEVGEEPDEWFRRVHPQDRKRLLEEVREHLRGRRE--HLNVEYRIRHRDGSYRWM 288 Query: 292 AFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 + + R + + +A D LT LPN + Sbjct: 289 LTRGLAVRDGEGNPVRMAGSQTDITRRKQAEEKLLHEASHDALTGLPNRAFFMERLGEAL 348 Query: 345 EQ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + + +D + ++ G M + + L ++ + L +L G E Sbjct: 349 RRPGDGDRVAVLFIDLDRFKMINDSLGHAMGDRLLVAAAERLKGCLRPQDTLARLGGDEF 408 Query: 402 LLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L G +E +L + L + + LL Sbjct: 409 TVLLEGVSSEEAASVADRLLERLREPFRLDGYELFTAASVGVVLGGRERAGPEELLRDAD 468 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---G 516 ++ A E + + + L N +R A+++ + + QPI + + Sbjct: 469 IAMYRAKALGGGRK-GIFEAGMHTRAMELFRLENELRRAIEREEFTAHYQPIVSLKTGLI 527 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GP 573 G++ ++ + G++ PD+F+P+ + L +L V+ L + + Sbjct: 528 SGFEALVRWRHPERGLIRPDEFVPVAEETGLIVPLELSVVREACASLVSWQREFPQHRPL 587 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 SVNL L + + ++ R+ + +++ LE+TE N S+ + +L Sbjct: 588 TMSVNLSRNQLARPELPEQVERILLETGLDARSLRLEVTESAIMENVGSAAATLSRLRDM 647 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 R+ IDDFG GY++ L +L D +K+D FV + D IV++I LA L Sbjct: 648 NIRVHIDDFGMGYSSLSVLHQLPIDALKVDRSFVGRMDGANDDVEIVQTIITLAHNLGLD 707 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VE ++ L +LG Y QG+L P A Sbjct: 708 VVAEGVEREEHLDRLRRLGCDYAQGFLFSEPLDAA 742 >UniRef50_A5UVR9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Roseiflexus RepID=A5UVR9_ROSS1 Length = 921 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 94/487 (19%), Positives = 182/487 (37%), Gaps = 21/487 (4%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVET-EYSLAFILAVLI--SFSVCLLYMVRIYHRSEWL 318 + L + L + L +AV + ++ + Sbjct: 424 WRLLAHTRRLITSFELEYRILHRDGNYRWMLCRGMAVWDEHGRATRMVGSQTDITGRKQA 483 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + AL D LT LPN ++ + L +D + ++ G Sbjct: 484 EEQLAYGALHDALTGLPNRTLFMDRLSLALKRAQREKHLFAVLFLDLDRFKTINDSLGHA 543 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIH 427 + ++ R L +++ + + +L G E ++L + +V + + Sbjct: 544 AGDELLIAVARRLESVLRPGDTVARLGGDEFAVMLDRLNAPEEAEWIVERIHQALQAPLS 603 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + E + L Q+ + + + + Sbjct: 604 VRGHTVYTTASIGLALGNEGYERPEELARDADTAMYQAKMQRRARHV-VFDPDMRRKAVS 662 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 L N +R+A+++ +L ++ QPI ++ + G+++PD+F+PL + Sbjct: 663 HFQLENDLRSAIERNELRVHYQPIVALNGRRVVAFEALARWQHPQHGLISPDQFIPLSEE 722 Query: 545 FNLSARFDLQVLESLLKWLATHPCD---KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L VL + + +VNL L Q ++ +I Sbjct: 723 IGLINTIGHWVLRDVCHQVREWRRRRPRHFDMWVNVNLSAHQLAQPDLVAQIAHAIADAG 782 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I P A+ +E+TE ++ E ++ + +L G + IDDFG GY++ L + D +K Sbjct: 783 IPPNAIKIELTENTFVTHREIAIAQLNELRSLGVGVCIDDFGAGYSSLGYLSQFPVDTLK 842 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID VF+ + IV++I LA + ++VVAE VET++Q +L L +Y QG+L Sbjct: 843 IDRVFIARLGMMREHYEIVKAIITLAHSLGMTVVAEGVETEEQATMLSALRCEYAQGWLF 902 Query: 722 GRPQPLA 728 GR P Sbjct: 903 GRALPAD 909 >UniRef50_C1SL51 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL51_9BACT Length = 1016 Score = 585 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 87/463 (18%), Positives = 175/463 (37%), Gaps = 18/463 (3%) Query: 284 GVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + + + + ++ + + QA D LT LPN Sbjct: 546 KDGEIFPTLMSCSSIRNSEGEITEFISVLHDITEQKRYEEQIKYQATHDSLTGLPNRIYF 605 Query: 341 EQAPEQE-------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 ++ + L +D + ++ G + I + + + Sbjct: 606 TDKLAEQIPKNHLPSCIGIMFLDLDRFKNLNDTLGHTTGDKVLEIIAERIRNTVHGPDMA 665 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 + G E + +G + + L MV + S +H L + A + N T Sbjct: 666 ARFSGDEFTVFFTGVKNQDALIEMVKNVTKRISEPLHIQGYELFIQTSAGISVYPDNGLT 725 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 L+ Q+ + + + + ++ + + A++ + L+ QP Sbjct: 726 ASELIKNAEIAMYQAKQTGKN-NIQLYTDGLDETIRDRFIMESKLNRAIENDEFSLHYQP 784 Query: 511 IRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW-LATH 566 + G + +L + G + PDKF+PL L V++ L H Sbjct: 785 KIDLATDSVMGMEALLRWHNPELGFIPPDKFIPLSEDSGLILPIGEWVMKRALSDTAKLH 844 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 + ++NL ++K + + + + ++ + V EITE + + Sbjct: 845 KEGFADLKIAINLSLRQFMKKGLVEFVEKSIETAGLNNRNVEFEITENIFTEDLSTISRI 904 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + ++ + AIDDFGTGY++ LK++ +KID ++ I ++T IV S+ + Sbjct: 905 MNEISNLNIKFAIDDFGTGYSSIGYLKKMPISTLKIDRSYISKIDSDTDSESIVSSVILM 964 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +K+ L+VVAE ET+ Q +L +G +QGY G+P P + Sbjct: 965 SKSLGLNVVAEGAETESQVNMLKDMGCSIVQGYYYGKPMPYDE 1007 >UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C313CD Length = 763 Score = 585 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 126/720 (17%), Positives = 237/720 (32%), Gaps = 59/720 (8%) Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 R +L ++ F + + + VV A L Q R G + Sbjct: 36 RRHRGLLILLWAHVPALFVFALATGNPLQHALLEVVPIALCALVGQREQLGRRGRAAAVT 95 Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 L ++ + + + + + + + L L+ M Sbjct: 96 IGLLTCSAVL--VHLWDGTIEAHFHYFVMVVALAAYEEWFPYLLAFGYVVLQHG-LMGMM 152 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT--------- 232 + + W + A ++W A SV L + Sbjct: 153 EPDSVYAHGTDDDRSPWFWAAIHGGFIAALGFASMVTWRANESVRAHLAASEQRFHRAFD 212 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRY----PFLNLTWAVSTL--------------CL 274 L F + Y W +S + Sbjct: 213 DAPIGMALIGLDGRFREVNRSLASLTGYGAGKLVQLRLWDLSPADVRAEDHAAWPPSAGM 272 Query: 275 LNYNQNFLQGVET------EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 Q F + T YSL + + S V L + ++ QA Sbjct: 273 EAVEQRFQRADGTIGWGLWRYSLVQDESGIASHWVVQLL---DVTSRKQFEQQLAHQAHH 329 Query: 329 DPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN L + + ++G + + +DN + ++ G +R++ Sbjct: 330 DPLTGLPNRALLTKRLQEALDLAREHDSGVAVIFVDLDNFKVINDSLGHDAGDRLLRNVS 389 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 L +++ + L + G EL + L + + + + + Sbjct: 390 ERLRRVLRPEDLLARFGGDELAVCLERVADTEPANRIADRMATALRAPFVLDGEQRFVTA 449 Query: 438 GAAWGRF-DGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + + LL ++ + + + + ++ L + + Sbjct: 450 SFGIALARPEDPDRSPDTLLRDADAAMYRAKERGKART-EIFDASMRRRAVDRLELESGL 508 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL + L + QP + + +L G ++P +F+P+ Q L Sbjct: 509 REALARNQLRVVYQPEVSLESGRIVAVEALLRWEHPQHGPISPARFIPIAEQSGLIVPIG 568 Query: 553 LQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + A + G +VNL L ++ + + + LE Sbjct: 569 AWVLREACRQAAHWNAESGGDGVVVAVNLSVRQLGASDLEATVRGAIDGARLPADRLCLE 628 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR-LQADIIKIDGVFVKD 669 ITE ++ +++ +++ L + G ++AIDDFG GY++ L+ L D++KID F+ Sbjct: 629 ITESAVMADPAAAIESLQTLKRVGVKLAIDDFGVGYSSLSHLRELLPIDVLKIDRSFIDG 688 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V D IV +I LA++ + VAE VET Q A L + QG+ RPQP AD Sbjct: 689 VVLREEDRAIVTAIVQLARSLGVDAVAEGVETSDQAAALRAMHCPIAQGFHFARPQPPAD 748 >UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepID=A3JQI8_9RHOB Length = 908 Score = 585 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 89/490 (18%), Positives = 182/490 (37%), Gaps = 26/490 (5%) Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWH 323 L + L E+ + +A + +R ++ + Sbjct: 407 LATGEGPVLNRRIEITGLHRNGHEFPIELSIAPFKMNGEYAFSAFMRDISEAKAAEDEIN 466 Query: 324 LQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT LPN R L +++ L +D + ++ G Sbjct: 467 KLAFYDALTGLPNRRMLYGKLEDEMKRSDRSGLPVVLMLLDLDFFKEVNDKLGHAQGDRL 526 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 + R + ++E + + +L G E +++LS + + H+ + + + + Sbjct: 527 LVEAARRITACVRETDTVARLGGDEFMIILSNMKDVTKASHIAENIIKSLAAPFYLSEKI 586 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + + L+ + + ++ L+ Sbjct: 587 NFISGSLGVALYPNDAQNADNLIVNADQAMYMAKDAGRN-GFSYFTLALQEAAQTRLSLI 645 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 + +RTAL ++ QPI + + +L + G ++P F+P+ + L Sbjct: 646 SDLRTALPGKQFAVHYQPIVELATGKIYKAEALLRWQHPERGPVSPADFIPVAEEAGLIH 705 Query: 550 RFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQ---------KNIAGRIIRLFKR 599 V ++ LA + + SVN+ P+ + + + Sbjct: 706 EIGDWVFHEAIRELAHWRELFEPELQISVNVSPVQFRESQGSDRRSLEGFKKNWLNALNG 765 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + ++V+ EITE + S + + G ++A+DDFGTGY++ LK+ D Sbjct: 766 LGLPGESVVFEITEGVLVNAEASVTEKLIAMRDAGVQVALDDFGTGYSSLSYLKKFDIDY 825 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+++ +T + + +I +A L V+AE VET+ Q+ LL G Y QG+ Sbjct: 826 LKIDQSFVQNLQDDTDNQALCEAIIVMAHKLGLKVIAEGVETEPQRDLLVGFGCDYAQGW 885 Query: 720 LIGRPQPLAD 729 L + P + Sbjct: 886 LYSKAVPADE 895 >UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=D1CEK7_THET1 Length = 1785 Score = 585 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 99/571 (17%), Positives = 200/571 (35%), Gaps = 33/571 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + + + A I +RR + E R L + + +I+ + Sbjct: 1202 FLQSVSNILAAAIEYRRAAQDLMRAEARYRKLVEQIPAVTYIEEMGMRGVVSYISPQVED 1261 Query: 246 VFFIIFTLGVG------KLRYP------FLNLTWAVSTLCLLNYNQNFLQGVETEYSL-- 291 + ++ +P ++ A + + Sbjct: 1262 MLGYTPEEWTSNPDPWSRIIHPDDYEDVATSMEKAEELGIPFRKEYRMISKSGEIVWVRD 1321 Query: 292 -AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 A I+ + ++ + L + QA D LT LPN Sbjct: 1322 EAVIVRDAEGQPLFWQGVLVNITDKKKLEDKLAYQAFHDALTGLPNRALFMDRLKGALAR 1381 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + L +D + ++ G + + LL +++ + + + G E Sbjct: 1382 AKRYNSCCAVLFLDLDRFKHVNDSLGHQYGDQLLIEVGNRLLSVVRSADTVARRGGDEFT 1441 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L + + + + N L + + + L+ Sbjct: 1442 ILLEPICELEYAKQVAERVIKELEKPFLINGQELYISTSIGIALSNE-YSDAEELIHNAD 1500 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 + + + + +S T +++ L + +R A+ + + L QP+ +KE Sbjct: 1501 VAMYWAKSRGRAR-YEVYDLSMSTFTLEKLKLESELRRAVQREEFSLVYQPVVRLRDKEV 1559 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPR 574 + +L + G++ PD+FL + L +L + + + P Sbjct: 1560 VALEALLRWHHPERGLLLPDQFLKELEDTGLIMPLTDWMLREVCRQHKEWQKRVAGELPL 1619 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN + + + + + +SP + LEITE A +A S+ ++ L G Sbjct: 1620 VSVNFTARQFQKATMLEDLASILQDMDVSPSCLQLEITETVAMDDAASTARTMKGLKDLG 1679 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++A+DD GTGY++ L++ D++K+D FV + + IV ++ LAK+ + V Sbjct: 1680 VKLALDDVGTGYSSLSYLRKFPLDVLKVDRTFVMGLGVDPDSTAIVHALVMLAKSLGMLV 1739 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 AE VE Q Q L LG QGY RP Sbjct: 1740 TAEGVEKQVQVDALSTLGCDLAQGYFFSRPM 1770 >UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SC92_CHRVI Length = 1124 Score = 585 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 100/520 (19%), Positives = 201/520 (38%), Gaps = 20/520 (3%) Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + + I L + F FL+ + + + + + Sbjct: 437 IAEMFGYAIRELIGLPLQELIPPAFRRAHVLHVERFLHGSAYDRRMSERSELSGY-RKDG 495 Query: 287 TEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-------- 337 + + + L+ + + ++ + A+ DPLT LPN Sbjct: 496 SIFPVEISLSKIQVDGRWVMVATILDVTERRLAEEELVWHAIHDPLTGLPNRTMIHERLE 555 Query: 338 RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 RAL ++ +Q + + +D + ++ +G ++++ + L+ ++ + + +L Sbjct: 556 RALRRSKQQGQSVALLFIDLDGFKLVNDSHGHQAGDELLKTVAQRLVDHVRPGDTIGRLG 615 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +++ E+ + ++ + LN + + L G + L Sbjct: 616 GDEFVVLCDHVESPAAVANLADRLNDLLREPVTLSGRRLFASASIGLAIGHGTTHSADDL 675 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L Q+ E + Q +++ ++N +R A+++ + + QPI Sbjct: 676 LRNADAAMYQAKEQGRD-GWRFFSEEIHEQARRRLDIINGLRQAIERDEFQVRFQPILCA 734 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK- 570 + G + +L GG ++P F+P+ V Sbjct: 735 QSQIIRGAELLLRWF-PSGGEVSPAHFIPIAEMSGSIVPIGKWVFRQACLAERQWRDRFG 793 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + P SVN+ L + + R+ P+ ++LE+TE S+ ++ + Q Sbjct: 794 VEAPYVSVNVSARQLNDEALVEEFRRMLAETGADPERILLELTETSLMSDVIFNLSVLNQ 853 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G R+A+DDFGTGY++ +L RL +KID FV + IV ++ +A+A Sbjct: 854 LAGLGLRVAVDDFGTGYSSLAQLLRLPLSKLKIDREFVDGLDKRHDSRAIVHAVCSMARA 913 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L V+AE VE Q L LG Y+QG+ RP P + Sbjct: 914 MNLKVIAEGVENASQFGYLRDLGCDYVQGFHFYRPLPPEE 953 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 99/429 (23%), Positives = 188/429 (43%), Gaps = 16/429 (3%) Query: 315 SEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRH 366 + + + D LT LPN +A+ +A + + +D + ++ Sbjct: 276 RQEVEQTLSHVITHDALTGLPNRSFFQEDLAQAILRAQRANKYLAVMLVDLDQFKKINDT 335 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--- 423 + ++ + L++ + + G E +++L PE+ + + N + + Sbjct: 336 LTHSAGDQLVVALTKRFNTLLENEISIARAGGDEFMMLLENPESVDEVIAIANRIMACMK 395 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + N+ + + + + + L+ ++ A + Sbjct: 396 QPFTLNDEEVFITCSIGIAVYPEGGVSAEDLIRNADAALYRAKAAGRN-GYHFYTTGMHA 454 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLP 540 + K++ L +R A+++ +L L QP N + G + +L + + G ++P +F+P Sbjct: 455 EALKRLELDRWLREAIERNELSLAFQPKVNLKTRDYTGAEVLLRWYRPEQGFISPAEFIP 514 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L + V+ + L+ R ++NL + L K + +I L + Sbjct: 515 LAEETGLIKELGMWVVRRACQQLSEWRGTPLSHIRLAINLSAIQLEDKELVHKIDNLLRE 574 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + + P+ + E+TEE N ES+M ++ +L K GFR++IDDFG GY++ LK Sbjct: 575 FDVPPRQLEFELTEEVFIQNIESNMAHLNELIKMGFRLSIDDFGVGYSSLAYLKHFPISC 634 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 IKID FV + TN D +I+ ++ +A +LSVVAE VET+ Q A L K G QGY Sbjct: 635 IKIDRSFVSQLETNADDRVIINAVIAMAHNLNLSVVAEGVETEAQAAYLQKQGCDEAQGY 694 Query: 720 LIGRPQPLA 728 L +P P Sbjct: 695 LFAKPLPPD 703 >UniRef50_Q1NLX3 GGDEF:EAL n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NLX3_9DELT Length = 775 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 97/429 (22%), Positives = 178/429 (41%), Gaps = 16/429 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 E + QA D LT LPN + Q E + L +DN + ++ Sbjct: 332 EVEQAMEQLRHQATHDLLTGLPNRELFQDRLRQATRRAAKEERPVAVLQLDLDNFKAVNN 391 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP----ETEGRLQHMVNIL 421 ++G +R I R L + ++ + +L G E +++L E+ + ++ L Sbjct: 392 NFGHAAGDEVLRFIARRLQQALADDCTVGRLSGDEFVILLPNIKECRESAEMARQILAAL 451 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + +G F + + + LL + Q+ + Sbjct: 452 ETPVSTPHTPNITVGGSVGIACFPDDGKDDKTLLRHVEMAMYQAKKAGRG-TYAFYAREL 510 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 + + ++L + ++TAL + L L+ QP + G + +L + G + PD+F Sbjct: 511 NQRHQDDLVLHHKLKTALAENQLELHYQPKVAMNDGRIIGVEALLRWHDKELGQVGPDRF 570 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ L VL + + LA + + +VNL P Q ++ R+ + Sbjct: 571 IPMAEATGLIVPLGDWVLNTACRQLAAWYAAGRELKMAVNLSPQQFRQPDLVNRLANILA 630 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + LEITE A N ++ + L G +A+DDFGTG+++ LK L Sbjct: 631 ATGAPAHLLELEITETAAMENFAATSRQLHNLSDLGLTLALDDFGTGHSSLAYLKSLPIS 690 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ D+ + +IVR++ +A + L VAE VE+++Q L + QG Sbjct: 691 QLKIDRSFISDLTFEENNRIIVRAVLSMAASMELETVAEGVESEEQLDFLRQHHCTSYQG 750 Query: 719 YLIGRPQPL 727 +L R P Sbjct: 751 WLFARALPA 759 >UniRef50_A0LBX0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0LBX0_MAGSM Length = 1134 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 101/478 (21%), Positives = 192/478 (40%), Gaps = 33/478 (6%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + Y + ++ + + M + + + DPLT LPN Sbjct: 647 RSDGSIYPKYLSIDRVLDRQGSVLNYVAMFQDLTEQKATEEELERLSHYDPLTGLPNRAL 706 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ--- 388 + + +D + ++ +G + + + + L L++ Sbjct: 707 FRNRLEHEFLVARRHNRSVALVLINLDRFKQINDSFGFTVGDRLLAMVAKRLEQLVRKTD 766 Query: 389 -----------ENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLD 434 +++ L +L G E ++L+ + L + Sbjct: 767 LIARQENRQERDSDTLSRLGGDEFSIILAELRAAEDAAIVARRTVALLEEPYDIEGQEVF 826 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 +G + N E+L ++ ++ E ++ + +QV L Sbjct: 827 LGGSLGVSIYPENAESLNGMIQCAERALVKAKEGGRN-TFRFYSEEMNRHSAEQVRLETE 885 Query: 495 IRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R A+ Q L+ QP I E EG + ++ + DG + +PD F+PL + L Sbjct: 886 LRRAVMQERFQLHYQPKLEIATGEIEGVEALVRWPRRDGRMFSPDAFIPLAEETGLIVPL 945 Query: 552 DLQVLESLLKWL-ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 +L+ + A + + R +VNL Q+++ ++ + + Q + LE Sbjct: 946 GRWILKQACADVVAINAQRVRPLRVAVNLSAKQFQQEDLEQMVLEALEETGLETQLLELE 1005 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE + + ++ + L G ++IDDFGTGY++ LKR D +KID FV+D+ Sbjct: 1006 LTESMMMGDVDEAINTMSILKGLGLTLSIDDFGTGYSSLSYLKRFPVDALKIDQSFVRDL 1065 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ DA IV ++ +L ++ + VVAE +ETQ Q L +L QGY I RP PLA Sbjct: 1066 ERDSEDAAIVHAVCNLGESLGMKVVAEGIETQLQMDFLRQLNCDTGQGYFIARPMPLA 1123 >UniRef50_A1WX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WX01_HALHL Length = 698 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 96/447 (21%), Positives = 176/447 (39%), Gaps = 16/447 (3%) Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQ 346 + + + + + R QA D LT L N + + Sbjct: 237 VTGAYGEVINFIAVFSDLTELKRSQERLQFQAYHDALTGLANRLLFKDRMARALERSRQS 296 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 E + + +D+ + ++ G +R + L + ++ L +L G E + L+ Sbjct: 297 EEQLAVLFIDLDHFKDVNDSLGHTAGDRILRQVAHRLQARLGADDTLARLGGDEFSICLA 356 Query: 407 GPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 ++ R ++ + N ET++ L+ Sbjct: 357 EIRDHRDALACAETVHQELERPFQYSQRWFQCRCSIGISMYPDNGETVEELIRNADSALH 416 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + A E ++ + +++ L +R L +G+L+ Y Q + G + Sbjct: 417 NAKAEGRNTT-CFYAEELTERAQRRLDLAQEMRQGLQRGELIPYFQHQVDLTTGRVVGIE 475 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNL 579 ++ + G++TP F+P+ + A +L + T ++ R +VNL Sbjct: 476 ALVRWHHPERGLLTPGAFIPVAEEVGTMAALGEDILLQACQQGRTWLDQRREFGRVAVNL 535 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 +I + R ++ + Q + LEITE + ++ + L + G ++I Sbjct: 536 SAAQFHNGDIEKTVRRTLEQTGLPAQCLELEITESTIMDLSPRTLERLAALRRAGVSLSI 595 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL + +KID F+ D+ T IV +I LA L VVAE V Sbjct: 596 DDFGTGYSSLLYLKRLPINRVKIDRGFIWDMGTTPESRSIVDTILQLAHVLGLEVVAEGV 655 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQP 726 ET QQ+ L G + QG+L RP+P Sbjct: 656 ETIQQRDQLIDAGCRVAQGFLWARPEP 682 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 84/418 (20%), Positives = 171/418 (40%), Gaps = 18/418 (4%) Query: 328 TDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D T LP+ + A + + ID+ + ++ +G + + + Sbjct: 102 YDQNTNLPDRNMFQHILAQEQENAKRKHFQLGVLYIDIDHFKVINDSFGYLKGNLLLGQV 161 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ----HMVNILNSRQIHWNNTGLDM 435 L++ N+ + L G+ +++L+G ++ L S +N + M Sbjct: 162 AERFKALLRGNDLIASLGGNRFVVLLTGLAHPEDATIVTLKLMQALESG-FCIDNHEVVM 220 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 F G+ + + LL A + ++ + + + Sbjct: 221 TISTGIAIFPGDGDDSEALLQSAEQSMYSVKADGGN-NYQFFKASTQSSAINRLNMESEM 279 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+++G+ +L+ QP N G + ++ + G++ P F+ + + + Sbjct: 280 RKAIERGEFVLHYQPQINATSGHVVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIG 339 Query: 553 LQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ + + +VNL + + ++ K+ ++P + LEI Sbjct: 340 EWVMYEACRQNKAWHDAGLAELKVAVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEI 399 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + E+++ +E++ G +AIDDFGTGY++ LKR D +KID F+ D++ Sbjct: 400 TESVIMKDIEATIALLEEIASMGLSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVI 459 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ D IV +I L+ L+V+ E VE +Q A L + +QGY +P P + Sbjct: 460 SSEDDGKIVEAIIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADE 517 >UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5B4_GEMAT Length = 966 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 114/695 (16%), Positives = 239/695 (34%), Gaps = 28/695 (4%) Query: 54 SILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 +IL + G +V L + + + ++ ++ A L R Sbjct: 253 NILVLIGGALLVRFLGHVASISEMHGGEGLPDLGFVVRPAACFLMAAAGWLSSATVMRRD 312 Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 + + L + ++ L +F + + A A+ + + Sbjct: 313 VRPSRDRDGPSVSILPY-AAVVPGFALLLRMAFEERHQPLLGLVLGAAALTAIAFVRQFA 371 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 + + L R + + + D+ + + S + + Sbjct: 372 ASREAVSTLAEASARDSEARFRSLVQHSSDVIMIVDPDGTLRFA------SPSMSTVFGH 425 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW--AVSTLCLLNYNQNFLQGVETEYSL 291 + + L+ + + + + +L + ++ Sbjct: 426 EPSRIVGTNLLSLLHVEDQQHAVQFLEELARSGARTGAGSPGVLKREWRLAHSDGSWMTV 485 Query: 292 AFILAVLIS--FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALE 341 + L+ L+ R + +++ QA DPLT L N AL Sbjct: 486 DNVGTNLLREPVVRGLVLNSRDVTEQSMIKQQYIHQAFHDPLTDLANRSLFLYQVGHALA 545 Query: 342 QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + Q + + L +DN + ++ G + R L ++ ++ + +L G E Sbjct: 546 RGARQHSPVTVLFLDLDNFKTVNDSLGHAAGDRLLVDAARRLASCVRSSDLIARLGGDEF 605 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +++ ++ + + + + SR + + + R E+ L+ Sbjct: 606 AVLVEDAQSVEEVLVVASRIGTALSRPFMLSGKEVFVSASVGIARSSR-GESSDELVRNA 664 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 + + E+ + +++++ +R A+++ + L QPI Sbjct: 665 DVAMYVAKTRGKGQHV-LFEQEMHDAALERLVVEADLRRAIEREEFFLEFQPIVELDTGN 723 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPR 574 G + ++ L + G + P F+P+ L VL + R Sbjct: 724 IIGAEALVRWLCRERGTVPPGVFIPIAEVTGLIVPIGKWVLRRACREAQRWTRERGIAAR 783 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VNL L I + + + + P ++LEITE N + SM + L + G Sbjct: 784 ITVNLSGRQLQDAGIVDDVRQALEETGLDPTQLVLEITESMLMQNTDVSMARLTALKELG 843 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +AIDDFGTGY++ L+R DI+KID FV I ++ +I L ++ Sbjct: 844 VSLAIDDFGTGYSSLSYLQRYPIDILKIDKAFVDVIDKGGEGPVLASAIVALGDTLRMNT 903 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE +ET+ Q+ L LG + QG+L P + Sbjct: 904 VAEGIETEAQRGHLLTLGCELGQGFLFSPPLDEEE 938 >UniRef50_B7KTR4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Methylobacterium extorquens group RepID=B7KTR4_METC4 Length = 1003 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 97/454 (21%), Positives = 184/454 (40%), Gaps = 19/454 (4%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------- 342 A+++ + V + A D LT LPN R ++ Sbjct: 544 ETAWVVRDAAGRPIWFEGTVADATERKRAQALIEHMARHDALTGLPNRRLFQETLAREID 603 Query: 343 -APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 A C +D + ++ +G +R I L ++E + + +L G E Sbjct: 604 GARRDGGSVVVLCCDLDRFKAVNDTFGHPAGDALLRVIAGRLRATLREGDVVARLGGDEF 663 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++L + R+ L R + +G + + ++ L Sbjct: 664 AIILPSRGKQRRIAAFARRLIQAAGRPVDLGGRATTVGVSIGVAVWPKHGDSADTLFKNA 723 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 ++ E ++ + LL +R ++ G L+ QPI + Sbjct: 724 DIALYRAKDSGRN-TFRFYESGMALAVVTRNLLEIEMRESIRSGGFALHYQPIFALADGA 782 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF 575 +G++ +L G ++P F+PL + L + L + A+ P R Sbjct: 783 PQGFEALLRWNHPLRGPISPGAFIPLAEESGLITQLGAWALHEACREAASWPG---DLRV 839 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ + + + ++R + + LEITE ++++ + ++ +L G Sbjct: 840 AVNVSAVQFRKTGLEQSVMRALAASGLPAGRLELEITESVLMQDSDAVIGSLHRLRAMGV 899 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 RIA+DDFGTGY++ L R D IKID F++DI + A +VR++ L + +++ Sbjct: 900 RIALDDFGTGYSSLSYLCRFPFDKIKIDRAFIRDIDE-PVAAAVVRAVVGLGERLGMAIT 958 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VET++Q + + G +QG+L+GRP P A+ Sbjct: 959 AEGVETEEQLVQVRRKGCTEVQGFLLGRPLPAAE 992 >UniRef50_B1WWM4 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=B1WWM4_CYAA5 Length = 967 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 95/478 (19%), Positives = 199/478 (41%), Gaps = 29/478 (6%) Query: 279 QNFLQGVETEYSLAFILAVLI--------SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 N++ G+ + L I ++ + ++ ++ + + +AL D Sbjct: 472 HNYVMGIHRQRPLDSIWTLVNAFPAFDDQNHLTQVVVLLLDITDRKLAEEQLRYRALHDA 531 Query: 331 LTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN L + + + + +D + ++ G ++ + I Sbjct: 532 LTGLPNRTLLTERLDHAIQRVKRYPDSLFAVLFIDLDRFKVINDSLGHLVGDQLLIYIAN 591 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYG 438 TL ++ ++ + +L G E +++L + + ++ + + I N L Sbjct: 592 TLKRHVRSSDTVARLGGDEFVILLENLTSPHEVVQVIERIEKDIKKPIQLMNKTLFTSAS 651 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 T + +L ++ ++ + + + + + L ++R A Sbjct: 652 IGIALSSPEYGTGEDILRDADNAMYRAKGNN-LTSYELFNVEMRQTMLEVFELETSLRQA 710 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L+Q +L+ QPI + E G++ ++ + + G+++P KF+PL + L + Sbjct: 711 LEQQQFILHYQPIVSATSLELLGFEALVRWVHPEKGLISPGKFIPLAEETGLIIPLSEWI 770 Query: 556 LESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 + +A D + + S+N+ +I ++ + + + LEIT Sbjct: 771 FQEACSQMAQWCADFRMASSLKMSINIAAYHFQSPQFLEKIDQILTETQLLGKNLKLEIT 830 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV- 671 E N + + + QL + I++DDFGTGY++ LKR + +KID FV + Sbjct: 831 ESLLIKNTDRFLSLVPQLQQRQIEISLDDFGTGYSSLNYLKRFPINTLKIDKSFVDGLDY 890 Query: 672 -TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 N D I+ +I +A++ + VVAE VET +Q+ L +LG + +QGYL+ P Sbjct: 891 QKNQADVSIIEAIIHIAQSLGMDVVAEGVETDRQRQQLQQLGCEAIQGYLMSPPLTSE 948 >UniRef50_A6LW88 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Clostridiales RepID=A6LW88_CLOB8 Length = 981 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 103/555 (18%), Positives = 217/555 (39%), Gaps = 31/555 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 +++ E++ A S+ + + I GY + + Sbjct: 418 LQQNEEALRVSEEKYKLALECANDSIWEWNLVTDTFFASDKLIDITGYKLDEINNLRNFV 477 Query: 255 VGKLRYPFLNLTWA-----VSTLCLLNYNQNFLQGVETEYSLAFI----LAVLISFSVCL 305 + L+ ++ L + ++ ++ + Y L + + Sbjct: 478 YENVHSDDLDKVKKDFKNHINQLTDVYSSEFRIRTKSSSYVWILSCGKALRNSEGKVIKI 537 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRI 357 +R + R A D LT LPN ++ S + + Sbjct: 538 TGSIRDISERKISEDRIKFMAFYDSLTKLPNRTLFMNRLNEQLQLSNYANKQGIVFFIDL 597 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 DN + ++ G + S+ + L++E + + +L G E ++L E +Q Sbjct: 598 DNFKNINDTMGHEYGDKLLISLAKQFENLIEEKDTISRLGGDEF-ILLHPDSKEDEIQTY 656 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 N L + +N + + + + +L ++ Sbjct: 657 ANKLLGLFDKVFKIDNKHMYITASVGIALYPKDGRDSSTILRNADAAMYRAKELGKNR-F 715 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + + ++ + +RTA+D +L++ QP + + G++ +L + G Sbjct: 716 SLFDPEMYLSLERKTSIERILRTAVDNNELIINYQPQYDLQANKIFGFEALLRLNSRELG 775 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIA 590 ++P +F+P+ + + L VL+ + A SVN+ + L + N Sbjct: 776 FISPAEFIPIAEECGYITQLTLWVLKESCRQSAKWFEAGYKFNSISVNISSVDLQETNFL 835 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + ++P + LEITE + +SS+ +++L G RIA+DDFGTGY++ Sbjct: 836 DNVKEIIESSSVNPNMIELEITETVLMKSFDSSIGILKKLMDMGIRIALDDFGTGYSSLS 895 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+R+ + +KID F+ +I +N + I+++I +A + L V+AE VET+ Q +L + Sbjct: 896 YLRRIPINTLKIDKSFIDNISSNKKEEAIIKNIIQMAHSMELKVIAEGVETEGQLLILER 955 Query: 711 LGVQYLQGYLIGRPQ 725 + Y+QGY +P Sbjct: 956 MKCDYIQGYYFSKPL 970 >UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Trichodesmium erythraeum IMS101 RepID=Q118H0_TRIEI Length = 866 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 111/610 (18%), Positives = 206/610 (33%), Gaps = 69/610 (11%) Query: 188 RMIVSPHFAQIL-WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R I AQ ++ A E+R L + ++ + + + L Sbjct: 246 RDITQQKRAQEFALQQAEAALKESEERYHRLVKNSPEAIAVNYMEKIVYINAAGAKLFGA 305 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL- 305 +G ++ L Q ++ E + ++ + + Sbjct: 306 NCPDEIIGQLLRKFIPSELIETEKQRLQQVQEQGMETHLQEEKLIKLNGEIIDVEILGIP 365 Query: 306 ---------LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS----- 351 +++ + + AL D LT LPN + + +S Sbjct: 366 YTYDGKAATQIILKDITHRKKTQAKLVYDALHDTLTGLPNRALFFERLKLALCRSRKQPN 425 Query: 352 ----FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 L +D + ++ G + + +I + L ++ ++ L +L G E ++L Sbjct: 426 YQFNVLFLDLDRFKVINDSLGHTIGDRLLIAISKRLQNCIKASDTLARLGGDEFTILLES 485 Query: 408 PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR----FDGNQET---------- 450 P + ++ R I+ + F + + Sbjct: 486 PSNLQDATKVAGRIHQELVRPIYLEGNEIFTTASIGIVTNRRNFIEDIDENHPLICPIYN 545 Query: 451 -LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD-------QG 502 + LL ++ + + + + + L N +R A++ Sbjct: 546 KPEDLLRDADIAMYRAKTLGKAR-HEVFDLTMHREAISLLQLENDLRRAIEIIKQNPVNS 604 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 +L QPI G++ +L G++ P +F+PL + L + +L S+ Sbjct: 605 QFILNYQPIICLNTGIITGFESLLRWAHPTRGLIYPGQFIPLAEETGLIVPLGMWILRSV 664 Query: 560 LKWLATHPCD------------------KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L T + SVNL L Q N+ I + + + Sbjct: 665 CHQLTTWQQECSTKYDSGCCMYSSCQFPTDNFTVSVNLSSKHLSQPNLLEEINTILEETN 724 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 P + LEITE N + + +L ++ IDDFGTGY++ L + D IK Sbjct: 725 CQPSYLELEITETLIMENVSLATQILNKLKNKNIKLLIDDFGTGYSSLSYLHQFPIDSIK 784 Query: 662 IDGVFVKDIVTNTLDAM--IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 ID FV + ++T IV +I LA L ++AE +ET+ Q L KL QGY Sbjct: 785 IDRSFVSRLDSDTSGQTCKIVGAIIGLANNLGLEIIAEGIETRTQMQKLKKLQCNKGQGY 844 Query: 720 LIGRPQPLAD 729 L +P D Sbjct: 845 LFSKPLEGED 854 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 109/605 (18%), Positives = 211/605 (34%), Gaps = 26/605 (4%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 L + + + +AD + + A+ I +LF +MI +F + Sbjct: 27 LTIAIVAVLFCAAALYRNADPVLEWTSSMIAVLAIAITAILFARNGQMIGFRNFHTPIVE 86 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + + ++V D + L P+ R Sbjct: 87 TLLQSEAVPLAILDRDGVIMEMNVASSNTLGYIRQDLLGKPLAPLLEPGS-------RNS 139 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLN 319 + N N L I + ++ + + + + + Sbjct: 140 LQEMLDHALQGKSEQRNINITHRSGFPLELQIISSPMMREDEVIGTVIVSQDLSDRKRNI 199 Query: 320 RRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMM 371 R A D +T LPN E + C L +D + ++ +G Sbjct: 200 ERIRYMAYYDDMTGLPNRTLFHIRMNESLAFAREHDRMIGLCYLDLDRFKLVNASFGREF 259 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQIHW 428 + + L + E + ++ G E L+L E+E +L + Sbjct: 260 GDMLLLQVAERLTRAIGEQGIVARMEGDEFALLLQDIESEEQLMELSRGMLHAIDEPFEL 319 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 L + ++ LL + + + E S + ++ Sbjct: 320 KGFPLHITGSLGAVTSLVKEDDGYSLLKKADIALVKVKESGKNDCM-LYSESWSNSSFER 378 Query: 489 VLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L + + A+ + + +L QP + G + ++ G++ P +F+P+ + Sbjct: 379 LTLQHEMYRAIQRKEFILLYQPQYDLVSGMMVGVEALVRWRHPAKGMIPPGEFIPIAEES 438 Query: 546 NLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 + + VLE + SVNL +Q+++A ++ + ++ + P Sbjct: 439 GMIVQIGDWVLEEACRQNKAWQDAGLPPMPVSVNLSIRQFVQQDLASKVASVLEKTGLKP 498 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LEITE + + +L G I++DDFGTGY+++ LK D +KID Sbjct: 499 EYLDLEITESMTM-DTGHVSRCLLELTDMGVGISVDDFGTGYSSFHYLKNFPIDRLKIDR 557 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+DI + DA IV +I +A ++ V+AE VE +Q L K +QGY P Sbjct: 558 SFVRDIQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRKHNCDEMQGYFWSPP 617 Query: 725 QPLAD 729 D Sbjct: 618 VSSTD 622 >UniRef50_D2UCH8 Hypothetical two-component system sensor protein n=1 Tax=Xanthomonas albilineans RepID=D2UCH8_XANAL Length = 716 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 90/448 (20%), Positives = 165/448 (36%), Gaps = 17/448 (3%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + ++ + + A D LT LPN L + Sbjct: 253 TVVDADGRQSFQVVVLEDITEQKRAEQELRYLANYDTLTSLPNRALLSERLARAIVRARR 312 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 Q + L +D + ++ G + +R++ L + + +L G E +V+ Sbjct: 313 QAGAVAVLFLDLDRFKDINDSQGHPVGDQVLRAVAERLQQAVGPQHTVARLAGDEFTVVV 372 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 ++ + + + + + ++ + + F + LL Sbjct: 373 EDIVSQDEAESVAARVLAAFEPPLRLDDRREVAVSTSIGISLFPQHALLPSELLKHADTA 432 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEG 518 Q+ A A + T + L +T+R +L L QP + Sbjct: 433 MYQAKAAGRRNA-QVYSASMDEATRHRATLASTLRKIPLDQELKLVYQPRYSLREQRVVS 491 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + +L D G ++P +F+PL + L + VL L S+ Sbjct: 492 VEALLRWHSADFGPVSPSQFIPLAEETGLILQIGEWVLRQACSALRDWRQMGLTDLCMSI 551 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ + L + N+ + ++ + V LE+TE S S + + G + Sbjct: 552 NVSAIQLERSNLPELMAQILAETGVPAANVELELTESVVMSQVGKSAEILHACRELGLTL 611 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTGY++ LKRL + +KID F+ D+ + DA I +I + + L VVAE Sbjct: 612 AIDDFGTGYSSLAYLKRLPINTLKIDQAFISDLSLDPDDASITSTIIAMGHSLDLKVVAE 671 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQ 725 VE Q L + G +QG+L+ Sbjct: 672 GVEQPSQLMFLREHGCDEIQGHLVAPAL 699 >UniRef50_Q1YPY3 PAS:GGDEF protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPY3_9GAMM Length = 873 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 102/470 (21%), Positives = 187/470 (39%), Gaps = 32/470 (6%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + L + + S ++ ++ H A PLT LPN RA Sbjct: 407 RKNGDVFPLLVTVKTIHDAKSRITHYVFSFSDITTTKRDADAIHKLAFFAPLTHLPNRRA 466 Query: 340 LEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + + +DN + ++ G + + + L ++ ++ Sbjct: 467 LIDTVSQALNSSQRHIKSLALLSIDLDNFKNINDTLGHQLGDKILIETAQRLRRCVRSDD 526 Query: 392 KLYQLPGSELLLVLSGPET--------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGR 443 + ++ G E ++VL ++ + + + ++ + + G Sbjct: 527 AVARIGGDEFVVVLENLDSNIESAKVEVEVVTTKILAVLNQSYRVDEQDIHSGASIGVAL 586 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 D Q ++ L Q QS + + + T Q L N + +A+ Sbjct: 587 TDNGQILIEELFKQADIALYQSKRSGRNQ-MCFFDLAMEETVTLQAQLANALHSAVQLQQ 645 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LY Q + + G + ++ GI++P F+PL +L VLE+ Sbjct: 646 FELYYQVQVDSQQRPVGAEALIRWEHPQLGIVSPSDFIPLAEASDLILSIGQWVLETACA 705 Query: 562 WLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 L G +VN+ P Q N +++ +ISP + LE+TE N Sbjct: 706 QLKRWQSQLHTSGLSVAVNISPRQFHQCNFVETVLQAIASCNISPSLLKLELTETVILDN 765 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 ++ + QL + G A+DDFGTGY++ +K+D FV++I D +I Sbjct: 766 TSETIEKMHQLQRAGVEFALDDFGTGYSSLS--------QLKMDQSFVRNIGIKEGDDII 817 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V++I +AK+ ++ V+AE VET+ Q L LG QGYL G+P P+A+ Sbjct: 818 VQTIIAMAKSLAIKVIAEGVETEAQHEFLDALGCPLFQGYLFGKPVPIAE 867 >UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIE6_9GAMM Length = 711 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 93/478 (19%), Positives = 182/478 (38%), Gaps = 19/478 (3%) Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR---IYHRSEWLNRRWHLQA 326 + Q+F + L F A L+ + + + ++ QA Sbjct: 228 ELIPGAFEAQDFFPKMHDGRWLYFTAAPLLDHQGNTIGAIETLQDITEQKEQEKKILHQA 287 Query: 327 LTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN + + +D+ + ++ G + + Sbjct: 288 HFDSLTDLPNRFLALDRLNLLTKEARRTRKKLAVLFIDLDDFKKVNDTLGHALGDKLLIQ 347 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ---IHWNNTGLDM 435 + L +++ ++ + +L G E +++++ + ++ + L + L + Sbjct: 348 ASQRLKSVIRSSDTIGRLGGDEFIVIINNLDEALDVRPIAEKLLDNFRDVFKVESRELLL 407 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + E LL S A E ++ +++ + + Sbjct: 408 TTSIGISIYPDDGEEPNVLLRNADSAMYHSKNQGRN-AYHFFTEDMNAGVQRRLQIEEQM 466 Query: 496 RTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 +AL + + L QP+ + G + +L G ++P++F+P+ Q L Sbjct: 467 HSALGRNEFSLRYQPVLDLKNNRIAGAEALLRWHNPVLGNISPEEFIPIAEQTGLIVPIG 526 Query: 553 LQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VLE LK +VNL PL + +I L + + A+ LEI Sbjct: 527 YFVLEQSLKAARKWSTTYSNEFTIAVNLSPLQFKDPKLIVKIKELLASHRLEGNALSLEI 586 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N ++L G +I++DDFGTGY++ L+ + +KID F++D Sbjct: 587 TEGVLLGNQIKVQEAFQELSDSGIQISMDDFGTGYSSLNYLREYKFQTLKIDRSFMQDFA 646 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + ++ + +A A + V+AE VE Q+Q L + G + QGYL+ +P D Sbjct: 647 LDKSAPALINATIAMAHALDVEVIAEGVEEQEQLDYLIRKGCNFAQGYLLSKPLTEQD 704 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 96/467 (20%), Positives = 182/467 (38%), Gaps = 23/467 (4%) Query: 283 QGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 +Y + V+ + ++ M + QA D +T LPN Sbjct: 210 HKNGHDYLKELTVTVIRDAAGHIINHVGMFSDITLRKKQEELIWRQANYDAITDLPNRHL 269 Query: 340 LE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + A + + +D+ + ++ G + + + L+ +Q + Sbjct: 270 FQSKLEQAAQHARRTGNLMALMLIDLDHFKAVNDSMGHRAGDMLLTRVSQRLIDSVQHAD 329 Query: 392 KL-YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + +L G E +++S + L S + + + + F + Sbjct: 330 TIIARLGGDEFAVIISDLFQPHDCDALAKALLENLSHPFNIDGENMFVSASIGIACFPTD 389 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L+ L + + ++ + N +R A+ + +Y Sbjct: 390 SDNLEALFKNADQAMYAAKNAGRN-GFSYYSPALHDAARTRLRMTNDLRKAIREEQFEVY 448 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + ++ G+++P +F+PL + + V + LA Sbjct: 449 YQPIVALDTGHITKAEALVRWHHPTHGLVSPAEFIPLAEETGIIIPLGNWVARQAIAQLA 508 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGR-IIRLFKRYHISPQAVILEITEEQAFSNAES 622 + ++NL P+ L ++ A +R R+ +S A+ +EITE + Sbjct: 509 RWRQFCDPRFQMTINLSPIQLRSQDFADMDWLRELDRHGLSGDAIAIEITEGLLLNAEPR 568 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 N+ G +IAIDDFGTGY++ L+R D +KID F++D+ + + + + Sbjct: 569 VNRNLHMFRDAGIQIAIDDFGTGYSSLAYLRRFNIDYLKIDRSFIEDM--DGVGHELCVA 626 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +A + L VVAE VET QQ A+L ++G Y QG+L RPQ AD Sbjct: 627 IVAMAHSLGLQVVAEGVETLQQSAMLKRIGCDYAQGFLFSRPQSAAD 673 >UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IP89_XANP2 Length = 758 Score = 583 bits (1504), Expect = e-165, Method: Composition-based stats. Identities = 96/437 (21%), Positives = 167/437 (38%), Gaps = 15/437 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQEAGKSFCCLRID 358 + + R + A DPLT LPN L + L ID Sbjct: 301 NYVGAFQDITRIKHSEFELDRIAHYDPLTDLPNRTLLASLLDLAVSRAGKTCAVLFLDID 360 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + +++ + + + L E +++L E Sbjct: 361 RFKTVNDSLGHIAGDAVLKAAADRIRAALDADATLGHYGADEFVVILEEIEGPQDAALAA 420 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + L +R N + +G + + LL + ++ A Sbjct: 421 SRLIDELARPFTINGGEIYLGASVGISLHPLDADDAAQLLQHANTALAEAKAQGRG-IYS 479 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + ++ ++ + +R L + + L QP+ + G + ++ G+ Sbjct: 480 FYTQALTRSARVRMEMEADLRRGLVREEFRLNFQPVVDLANGRIAGAEALVRWQSPVHGL 539 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAG 591 + P++F+PL + L VLE + +A +VNL P + + Sbjct: 540 VLPNRFIPLAEETGLIEPLGDWVLEEACQQMAKWTAAGADLDFIAVNLSPRQFQRGTLCE 599 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI + +R + + +EITE F + + + G RIA+DDFGTGY++ Sbjct: 600 RIEEVLRRTGLPAARLEVEITENVLFGAVA-AERKLRDMRDSGVRIALDDFGTGYSSLAY 658 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR +KID FV D+ DA I +I +A+A L VVAE +E +Q A L + Sbjct: 659 LKRFPISKLKIDRSFVHDLPR-AADAEIATAIISIARALGLDVVAEGIEAPEQCAFLKER 717 Query: 712 GVQYLQGYLIGRPQPLA 728 G + QGYL GRP Sbjct: 718 GCGFGQGYLFGRPVTSE 734 >UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLE3_9GAMM Length = 821 Score = 583 bits (1504), Expect = e-165, Method: Composition-based stats. Identities = 105/560 (18%), Positives = 200/560 (35%), Gaps = 42/560 (7%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLL-------------LLLCTPYENDFIAGYLVPVFFII 250 + E + +L A ++ L L +++ I G + F Sbjct: 239 VLELSRSESFSRSLMENAGDAMFLCKSDTSIVRTNRQAELTLKIDSNKIIGRSLADFSES 298 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF-ILAVLISFSVCLLYMV 309 FT+ +S + + + + + + + V + + +L M Sbjct: 299 FTVA------ELEKRFDELSDDQVSTFEDLQIDSTGSAFPIEARGIKVHLEEQLYILIMA 352 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLE 361 R + ++ + A D LT + N R + + +D + Sbjct: 353 RDITARKAAEKQVYELAFFDTLTGMANRRLFMDRLSSSLVLHQTNGKYGAVLYMDLDRFK 412 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GRLQH 416 ++ G +++I + ++ + G E +++L + H Sbjct: 413 TINDSLGHGAGDLLLKAISGRINSIIPTGATSARFGGDEFVILLPEAGIDKESCIEAAAH 472 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + ++ L F +L + + A Sbjct: 473 LAEDIIQQFTDPFLVDSHSLYCTISVGIALFPEQNSNSGDILRRADTALYRVKAKSRN-G 531 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYDEILARLKYDGG 531 + + +++ + + A++ G+L L+ QP +G G + +L + G Sbjct: 532 FQFYDPEMQSSAQERLNVEKGLHQAIEHGELELWYQPQIGAKGECIGAEALLRWNHPERG 591 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKN 588 ++ P F+ + VL + L R +VN+ PL +Q + Sbjct: 592 LVFPGDFIQIAEDSGQIVEIGNWVLAQGVSQLKGWMERGLPSTFRRLAVNVSPLQFMQVD 651 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 R+ L I + LEITE +N E + ++ L K G AIDDFGTGY++ Sbjct: 652 FVDRVSTLLDESGIPGFMLELEITENMLLNNFEIASQKMKLLKKKGVSFAIDDFGTGYSS 711 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 + L+ L DI+KID FV D+ ++ A IV+ I A L V+AE VET ++ L Sbjct: 712 LKYLRHLPLDILKIDRSFVTDLRPHSEQAAIVQVIIATADRLDLVVIAEGVETTEECNTL 771 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 +LG QGYL +P Sbjct: 772 SQLGCNCFQGYLFSKPVQAE 791 >UniRef50_A1K8Z7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K8Z7_AZOSB Length = 691 Score = 582 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 93/434 (21%), Positives = 171/434 (39%), Gaps = 16/434 (3%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLE 361 R+ R R + A D LT LPN +A A L +D + Sbjct: 242 RLIDRLRDERSRAYQLASHDHLTGLPNRLLFTELANSHLSRARRSHAPFVMMFLDLDRFK 301 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + ++ + L ++E + + +L G E +L+L+ + + L Sbjct: 302 RINDTLGHRVGDLLLQEVALRLRQTVRETDIVARLGGDEFVLLLTELDALDDASRVARKL 361 Query: 422 NS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + + ++M + ++ ++ ++ + Sbjct: 362 IEAIGQPMVLDGHEIEMRPSVGIAIHPRDGMDVEAMMRNADSAMYEAKRSGSGR-FHYYD 420 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTP 535 ++ +++ Q+ L R A+ + +L+ QP + ++ + G++ P Sbjct: 421 PSLNSRSSLQLDLNGRFRRAILGNEFVLHYQPRVTLNGFRVTSLEALIRWQHPERGLVPP 480 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRII 594 +F+ Q L V+ + +A + ++N+ P L + I Sbjct: 481 GEFIEYAEQEGLVVELGNWVVREACRQIAAWIAEGLEIVPVAINVSPKQLRDHSFVEVIR 540 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 Y I P + +EITE + E +E L G +IA+DD+GTG+++ LK+ Sbjct: 541 ESVAHYGIRPALLEIEITERCVVEDFERPRAALETLSALGLKIALDDYGTGFSSLSYLKQ 600 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L DIIKID F+ DI DA IV S L L+V+AE VET++Q L G Sbjct: 601 LPIDIIKIDRSFISDIRNARHDAAIVASTIALGHNLGLTVIAEGVETREQVIYLRTAGCD 660 Query: 715 YLQGYLIGRPQPLA 728 +QGY +P P Sbjct: 661 EVQGYYFQKPAPPD 674 >UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNH0_9PROT Length = 760 Score = 582 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 102/525 (19%), Positives = 205/525 (39%), Gaps = 23/525 (4%) Query: 225 VLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 L++ ++ + + + + L + P L+ T + N + Sbjct: 228 NLIITEANRSISELLNAPIHKLVNMDMKLLRDQSIRPQLDATLSGERGYYEGEYHNLISD 287 Query: 285 VETEYSLAFI-LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 E + + + + + L +V +++ QA D LT L N L Sbjct: 288 EEIWIKMQAVPMYDIDNQIKGGLGIVEDITGRIQADKKIRQQAFYDHLTGLANRLTLNDR 347 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + IDN + ++ G + +++ + +M++ + + + Sbjct: 348 LEQQIARLARHNRFGAILFIDIDNFKTINDSLGHHIGDTLLKTFAQRASSIMRKEDTVAR 407 Query: 396 LPGSELLLVLSGPET--------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 L G E +++LS + ++ L I L + Sbjct: 408 LGGDEFVILLSDLSDNKNHALEYSHNVARKLHKLMKEPIEVEEHSLYVTLSIGITTISEE 467 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 +E + +L ++ E+ +S + Q++L + +R AL LY Sbjct: 468 EEDINVILKHADIAMYKAKQQGRNTT-CFFEQGMSKKIEDQLILGSELREALKHNQFELY 526 Query: 508 AQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + + ++ G++ PD F+P + L V++ Sbjct: 527 YQPIVETKSSIITSCEALIRWNHPTRGLIYPDDFIPYAEESGLIISIGDWVIQRACIDYK 586 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 K S+N+ Q + +I++ + Y ++P A+ LE+TE A N ++ Sbjct: 587 KINHKIKN--ISINISSKQFNQDDFVTKILKATQEYSVNPSALKLELTESVALDNLLATT 644 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L GF IA+DDFGTGY++ LK L D +KID F++ ++ N DA +V++I Sbjct: 645 DKMNLLKSHGFTIAMDDFGTGYSSLSYLKNLPFDFLKIDRSFIQHVLDNEDDASLVKTIL 704 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++K V+AE VE ++ L L +Y QG+++ + P+ + Sbjct: 705 TISKQFKFEVIAEGVEEKEHVEFLKDLDCEYYQGFVVSKALPVNE 749 >UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=Q12L20_SHEDO Length = 1047 Score = 582 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 90/474 (18%), Positives = 177/474 (37%), Gaps = 23/474 (4%) Query: 278 NQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 +F + Y+ + + C + + + LQA D LT L Sbjct: 556 ELSFQRKNGQTYTAWVTINAIGELDTCDTLNVMLFADVSEKKQAEELIWLQANYDTLTGL 615 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN R L + G + L +D + ++ G M + + + Sbjct: 616 PNRRMLLEYIKLQIANCTRDNQGFALLFLDLDFFKEVNDSLGHDMGDSLLVEASQRIKAC 675 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 +++ + + ++ G E +VL+ ++ + N + S + + Sbjct: 676 IRDADLVARIGGDEFTIVLTDFTGPKGVERVTNKILKQLSEPFMLGSEMAYISGSIGITL 735 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + T+ LL + AH + + +++ L+ ++TA+ + Sbjct: 736 YPDDALTIDGLLKNADQAMYSAKAHGRNK-FNYFTPKMQETALRRMKLIQDLKTAIKMEE 794 Query: 504 LLLYAQPIRNK------EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 LY QPI + + ++ G ++P F+P+ + V Sbjct: 795 FELYYQPIIDFSANASDNITKAEALIRWHHPKLGFISPVDFIPIAEDTGMIVEIGNWVFR 854 Query: 558 SLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNI-AGRIIRLFKRYHISPQAVILEITEEQ 615 + A + S+N P+ + + ++SP ++ +EITE Sbjct: 855 QACRQAAQWKQTYGLDIQISINKSPVQFRDERSSVTSWTQYMSELNLSPASICVEITEGL 914 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + G +I++DDFGTGY++ LK+ D +KID FV ++ NT Sbjct: 915 LLETESGVGAKLAAFRDAGMQISLDDFGTGYSSLSYLKKFDIDYLKIDKSFVSNLEDNTN 974 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D + +I ++ + V+AE +ET+ Q+A+L G Y QGYL +P D Sbjct: 975 DLSLCEAIIVMSHKLGIKVIAEGIETELQRAMLECAGCDYGQGYLFSKPVKAED 1028 >UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desulfovibrio RepID=C4XGC1_DESMR Length = 725 Score = 582 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 115/559 (20%), Positives = 209/559 (37%), Gaps = 35/559 (6%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY---ENDFIAGYLVPVFFIIFTLG 254 + EKR L + LLL C ++DF P F +L Sbjct: 153 LFKHHTEQELRRSEKRYRELFSAMLNAFLLLRHCPGSSQGQDDFEILGANPAFERATSLS 212 Query: 255 VGKL-RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS-------LAFILAVLISFSVCLL 306 ++ + + + G + + F+ + Sbjct: 213 NDEIVGHTLRQTLPGIEPFWIDTLAAVAATGRPVRFENYLSDLNMYFLAQAYSPQPGQVA 272 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGK-SFCCLRI 357 + + R + D LT LPN RA+E+A + + L + Sbjct: 273 VALEDVTERKRGEERLRYRTFHDALTGLPNRALCLDRIARAIERAKRRSNYIYALLFLDL 332 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G ++ +R + L +++ + + ++ G E +++L + G + Sbjct: 333 DRFKLVNDSLGHLVGDGLLRRVADRLRREVRQLDTVARVGGDEFVVLLEEIASPGDALRI 392 Query: 418 VNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA--EQSCAHHHVL 472 V + R + + + + E + LL + +S V Sbjct: 393 VKAVRERLRVPFVVDGRQIYVTASLGVVLGPADYERPEELLQNAAIAMNAARSAGCGRVR 452 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 D + + + + L +R L + + +L+ QPI + G + ++ + D Sbjct: 453 VFDW---SMRERAERVMDLETNLREGLVRDEFVLHYQPILDLATRRLRGVEALVRWRRVD 509 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQ 586 G ++ P +F+P Q L VL + LA +VNL Q Sbjct: 510 GELVPPGEFIPAAEQSGLIIPLGAVVLTEACRALARWRAGSLGDSPFFMAVNLSARQFTQ 569 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ +++ +R ++P + LEITE + ES+M + L + G I IDDFGTGY Sbjct: 570 PDLVKQVVTALRREAMAPADLKLEITESVLMEHPESAMLKLRGLRELGVSIGIDDFGTGY 629 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+R D +K+D FV + + +IVRS+ LA VVAE +ET Q Sbjct: 630 SSLSYLQRFPIDTLKVDRAFVSGMEE-QGNRVIVRSVVSLAHNLGYDVVAEGIETAAQLD 688 Query: 707 LLHKLGVQYLQGYLIGRPQ 725 L +LG QG+L RP Sbjct: 689 DLSRLGCDMGQGFLFARPM 707 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 84/463 (18%), Positives = 173/463 (37%), Gaps = 25/463 (5%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 EY ++ + L + + QA D LT LPN Sbjct: 280 HKYGREYPAWLNISSVLSKKGSICYYLINFSNITDKKKSDEIIWRQANYDSLTGLPNRNM 339 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + +D + ++ +G + + + L ++E + Sbjct: 340 FYDRLSHDIKNAARTGMLLAVLFIDLDRFKEVNDSFGHSVGDALLVEAAKRLNGCVRETD 399 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L+G + + ++ ++ ++ H N + F + Sbjct: 400 TVARLGGDEFTIILNGINDQHCAERIIQMILLELTKPFHLNAKLAYVTASIGVTFFPADA 459 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + + L+ + + + T + + +R AL + L L Sbjct: 460 GSAEILMKNADQAMYAAKNNGRNCC-SYFTSNMRKATETRSRIAYELRHALREQQLFLMY 518 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + ++ + G ++P +F+ + + NL + V + + +A Sbjct: 519 QPIVKLATGSIHKAEALVRWQHPERGTVSPVEFISIAEESNLISEIGDWVFKQAVNQVAA 578 Query: 566 HPCD-KKGPRFSVNLMPLTLLQK--NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + + S+N P + K + + ++I+EITE E Sbjct: 579 WQANYNTNFQISINKSPKQFISKMSDWVNH----LHEQKLDGHSIIVEITENLLLDVHEL 634 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + G ++AIDDFGTGY++ LK+ D +KID F+ ++ + + D ++ + Sbjct: 635 VVKQLLNFRDAGVQVAIDDFGTGYSSLSYLKKFDIDYLKIDQSFISNLDSRSNDRILCEA 694 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + +A + V+AE VET Q+ LL +G Y QGY +P Sbjct: 695 VITMAHRLGMKVIAEGVETDSQKQLLIAMGCDYGQGYFFSKPL 737 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 117/694 (16%), Positives = 227/694 (32%), Gaps = 29/694 (4%) Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 W VV V G H +++ T ++ + +S Y Sbjct: 67 WAEVVHVAAGSVLLAGLCPHKGCRSLWLLIAVTTVSLMGWVVWASIHIAPMAAIIPSSLY 126 Query: 121 VWQRLFWLGLVT--------PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + + LV G L + L + +L+ Sbjct: 127 IGAAMLAAALVFWRRARRIPGNGYSLVALLFALWGLHKLDY-PWLAAVPQAVPYGFMLTQ 185 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 ++ + L R + + + G+ A + + C Sbjct: 186 VLSIGLGVALLIAADRESRARENEGRRRSQALLHLQGEAMAATANAIFITDRAGRIEWCN 245 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + + + A+ N + T Y + Sbjct: 246 KAFSQLTGWAETEAMGRGARRLLMGAER-DRRMDEALKRGENWRGELNLRRRDGTLYVVD 304 Query: 293 FILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--- 346 + + + + R + D LT LPN + ++ Sbjct: 305 QNVTPIRDDRGRISHYVVVQEDVTERRRAEERIRFLSNHDALTALPNRLLFREQIQRAIG 364 Query: 347 -----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 G + L +D+ + G H + +I L+ + E L ++ G E Sbjct: 365 RAKTERHGLAVLILDLDDFSHYNDVLGHDGGDHLLLAITERLMSTARGIESLARVGGDEF 424 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +L + + + L R N + +G + + LL Sbjct: 425 GFLLLTTDGGESVVELAGSLTKAMRRPFDINGHDVQVGAAIGITLYPDDGADADTLLKNA 484 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 ++ + + + + L + +R A+ + +L L+ QPI + + Sbjct: 485 DMAMYRAIEDNPN-GYRFFAPTMDAELALRRRLESDLRKAIQRDELELHYQPIVDTQSRR 543 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPR 574 ++ +L D G ++P +F+P+ + VL + + Sbjct: 544 IISFEALLRWNHADDGWISPVEFIPMAEGNGMIGPIGEWVLRRACQQMRDWDRMGIPPVP 603 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ L L ++++ + ++ + + LE+TE +A+++ + G Sbjct: 604 VAVNMSALQLKRQDVPMLVRKMLTEAGVPSHRLELELTETTVMEDADAAQRIFADIAGLG 663 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 R+A+DDFGTGY++ RLKR +KID FV D+ + DA I R+I + A L V Sbjct: 664 VRLAVDDFGTGYSSLARLKRFPVGKLKIDRSFVGDLAEDEGDAAIARAIISMGHAMGLKV 723 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VAE VET +Q A+L + G +QG+L R P Sbjct: 724 VAEGVETPEQLAILAEAGCDAIQGFLFSRAVPAD 757 >UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCU3_9GAMM Length = 723 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 84/468 (17%), Positives = 172/468 (36%), Gaps = 20/468 (4%) Query: 281 FLQGVETEYSLAFILAVLISFS--VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 F + + ++ ++ + + A D LT L N Sbjct: 240 FWDRAGQLLPVEYKATPMMVDDDLAGIVIAFQDITERRRTEEQLARLAQYDALTGLVNRN 299 Query: 339 ALE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 A ++ E + + +D + ++ ++G + ++ + L ++ Sbjct: 300 AFNGLLKKALSRSARHEQPLALLFIDLDQFKTINDNHGHEIGDSLLQEVAMRLTDCVRNG 359 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E +++L + + + + +G + + Sbjct: 360 DIIGRLGGDEFVIMLESLQATKDAARVSQSVLDALEAPFTIRGHQIFIGASIGIAVYPDS 419 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 T + LL +S + + + + L +R A Q + +Y Sbjct: 420 ALTARELLRCADIAMYRSKEEGRNR-YRFFTDEMQESVREALQLEIDLRRAYRQQEFDIY 478 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ + DG + PD F+P + L V + Sbjct: 479 LQPKICMATESVIGAEILIRWPRPDGSFLPPDVFIPKAEEMGLIHDIGEWVFRETCDTIR 538 Query: 565 THPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + + F++N+ L ++A I + K I P + +E+TE + Sbjct: 539 SWQQQNRIPLDFTFAINISMRQLHTGHLAEDIAAIVKEVGIDPNCLEVEVTESIMMQDPR 598 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 ++ + LH+ +I+IDDFGTGY++ L++L D IKID FV+ + ++ IV Sbjct: 599 VTIDALNALHQQKIKISIDDFGTGYSSLSHLRQLPIDAIKIDKSFVQALESDGQADAIVN 658 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I L + V+AE +ET+ + L G QGY +P D Sbjct: 659 TIISLGHNLDMRVIAEGIETEANRQALTAAGCDVAQGYFYAKPMCRED 706 >UniRef50_A9WJ06 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WJ06_CHLAA Length = 845 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 88/437 (20%), Positives = 171/437 (39%), Gaps = 31/437 (7%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + QA D LT LPN E +Q + + +D + ++ Sbjct: 403 EQHATLHKLAYQAHHDALTGLPNRLLFEDRLQQAIEHARRANTMVAVLFIDLDRFKHVND 462 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + + R ++ + + + G E LLVLS + ++ H+V L+ Sbjct: 463 TLGHTTGDMLLIQVARRFEACIRATDTIARHGGDEFLLVLSDITSPQQVTHVVRRLHEAL 522 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + N + + + + + L ++ H + + ++ Sbjct: 523 DQPFFVNGHEIFVSASIGASLYPIDGTDVIALQRAADVAMYRAKQLLHN-SFQFFDAAIT 581 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLP 540 + +++ + N +R A+++ +LLLY QP + + G + +L + G+++P +F+P Sbjct: 582 DVSIERLQIENLLRRAIERHELLLYYQPKVDRTGQLVGLEALLRWQHPELGMVSPARFIP 641 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKK--------GPRFSVNLMPLTLLQKNIAGR 592 + + L VL + + + D Q + A Sbjct: 642 IAEETGLIVPIGRWVLREVARQVTQWWRDGLKVVPVAVNVSVI-------QFTQADFAQT 694 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + + LE+TE + + +L + G +AIDDFGTGY++ L Sbjct: 695 VADTVAQTALPFSWLELELTESMLMGQIDDLRRQLGELRQLGVTLAIDDFGTGYSSLSYL 754 Query: 653 KRLQADIIKIDGVFVKDIVTNTL--DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 RL +++KID FV + + + ++ +I L + +VAE VET Q+ +L Sbjct: 755 HRLPINVLKIDRSFVARLDQDDAGVERSLITTIITLGHHLGVQIVAEGVETAGQRQILFD 814 Query: 711 LGVQYLQGYLIGRPQPL 727 G QGY I RP P Sbjct: 815 AGCDVFQGYHISRPLPA 831 >UniRef50_Q1K260 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K260_DESAC Length = 774 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 119/627 (18%), Positives = 228/627 (36%), Gaps = 43/627 (6%) Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 GL + Y + + PL + + + + + L TA+ + R Sbjct: 150 GLFYAWALIAGHYNLLPYIYQPLDGTPALSETFLLLLWLWVTLLNTAIAFICTFLTHALR 209 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + ++L + L++ D+ + Sbjct: 210 ---------------RKTAEASTLARRLGNFLNHANDLIIQFRPDGTIDYANQASRSILN 254 Query: 249 I---IFTLGVGKLRYPFLNLTWAVSTLCLLN-----YNQNFLQGVETEYSLAFILAVLI- 299 I + + L P W L L N + ++ + ++ V + Sbjct: 255 IDPDSNEINISSLIDPTDRPRWQRQVLLLENGTSFPATELLMRTNSDQQAIILDSNVTLL 314 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEA 348 L + R R D LT L + + + Sbjct: 315 EENDGQWTLWGIFRDITARRQAEARLDQLTNFDQLTGLAHRSNFMERAEQVTLMAKRERK 374 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 +F + ID + ++ G + ++++ + LL ++E + + +L G E +++L Sbjct: 375 NTAFLIINIDRFKLINDALGSAIGDEVLKAVSQRLLNQVREVDVVGRLNGDEFVIMLVNV 434 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E+ + ++ + I N+ L + + + +T + LL Q Sbjct: 435 ESADIVHNLAVKITQALTPMIAINSHELFLTTSTGIALYPQDGDTPEELLKQAEIALLSV 494 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + + + + ++ LLN + AL Q +L+ QP N + + + Sbjct: 495 KSTGRN-GIQFFTDQIDLNQNSRLRLLNGLHLALQQQQFVLHYQPKVNIHTGQITSVEAL 553 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 + + G + P +F+PL + L VLE + R +VN Sbjct: 554 IRWNHPEMGWVMPTEFIPLAEESGLIGIIGRWVLEEACRQCLIWQQQGLPPIRMAVNFSG 613 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L Q+++ I + K+ ++ Q + +EITE N E ++ ++ + K G IAIDD Sbjct: 614 HQLQQESLLKSITDVLKKTGLAAQWLEVEITETVIMQNPEVTINILQAIQKLGVHIAIDD 673 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR + +KID FV+DI + DA IV +I + L++VAE VET Sbjct: 674 FGTGYSSLAYLKRFPVNTLKIDRAFVRDIEQSDTDAAIVGAILKMGATLKLNIVAEGVET 733 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ L + +QG+L P Sbjct: 734 HGQRKFLEQHNCHEIQGFLYSPAVPPE 760 >UniRef50_Q21VJ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VJ9_RHOFD Length = 735 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 94/435 (21%), Positives = 175/435 (40%), Gaps = 16/435 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + R + + QA D LT LPN + +A + + +D Sbjct: 291 GVARDITDRKRADELITYQAYHDILTDLPNRVLFKDRLGLAVLQAKRNDASLALMFIDLD 350 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G ++ ++ L ++ + L +L G E VL + Sbjct: 351 RFKLVNDTLGHVIGDKLLQQAAIRLKACLRSGDTLARLGGDEFTAVLPELSDRQDAVLIA 410 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + G+ E+ L+ A Sbjct: 411 EKFLECLRQPFQLAGQSVHISASIGIAIYPGDGESTDELIRNSDIAMYHMKAEGKN-GHS 469 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 + + + +++ L +++R AL++G+L +Y QP + G + ++ + G Sbjct: 470 FFDRSMLDASCQKIELEHSLRLALERGELEMYYQPQVDVRTQKIVGAEALMRWNHPERGF 529 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAG 591 + FLP + L +LE++ L + R S+NL P L + + Sbjct: 530 LGAGDFLPFAEENGLIIPITDWMLEAICLDLLDWNAAGGEPVRLSLNLSPQYLDRGDFFD 589 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ +HI+ + +E+TE N ++++ + +L + G +AIDDFGTGY++ Sbjct: 590 KLKNALTLHHINASQIEVEVTENICIHNPQTAIEQLNKLCQLGVSVAIDDFGTGYSSLSY 649 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L R IKID FV I + +V +I +AK SL++VAE VETQ Q+ L + Sbjct: 650 LHRFPIHTIKIDRSFVMKIQNDNSQCPVVLAIISIAKGLSLNLVAEGVETQVQERYLERS 709 Query: 712 GVQYLQGYLIGRPQP 726 G +QGYL +P Sbjct: 710 GCNTMQGYLYHKPLS 724 >UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FF8_SACD2 Length = 581 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 94/417 (22%), Positives = 174/417 (41%), Gaps = 16/417 (3%) Query: 328 TDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 DPLT L N L + + L ID + ++ G+ + I Sbjct: 145 FDPLTGLANRAQLYEQLRRAIDYGRVHRECVTVMMLNIDRFKNINDSLGVGAGDDVLIQI 204 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMG 436 L ++++N+ + +L E +L+L + + + + + + + ++ + Sbjct: 205 SEILRNVLRDNDTVARLGSDEFILLLDKVDNPHHITKIADKILNAIGQPLNICGHEITCT 264 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 +F + +++ LL ++ + +S +T +L+ N +R Sbjct: 265 ASLGVSQFPIHGDSIDLLLKHADEAMARAKSEGKNR-YKIYTAQMSERTVDALLMENDLR 323 Query: 497 TALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL+Q + +L+ QP + G + ++ G+++P F+PL + L Sbjct: 324 RALEQDEFILFYQPQVHLRTGKIIGLEALIRWQHKTKGVISPLDFIPLAEETGLIEEVGA 383 Query: 554 QVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + + +VNL Q + A ++ + + PQ + LEIT Sbjct: 384 WVLAHACERFHHWLKQGLSLGKVAVNLSARQFRQAHFAETVVEALNKSKLPPQYLELEIT 443 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + + + + L+K G IAIDDFGTGY++ LK+ + +KID F+ D+ + Sbjct: 444 ESLTMQDTDEVLQTLGYLNKLGLSIAIDDFGTGYSSLSYLKKFPVNKLKIDRTFIHDVGS 503 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D I +SI DLA S+ VVAE VE Q L+ G +QGY +P + Sbjct: 504 ELDDGAIAKSIIDLAHNMSMLVVAEGVERLGQSRWLYDQGCDQVQGYYFCKPLSENE 560 >UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAA4_KANKD Length = 1128 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 98/454 (21%), Positives = 186/454 (40%), Gaps = 17/454 (3%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 TE+++ + + + + + + H + D LT L LE+ +Q Sbjct: 657 TEFAMIYPVRNNKGKIINYVAHKEDITLKKIAEEKIHQLSNYDQLTGLLKREMLEERLQQ 716 Query: 347 --------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + L +DN + ++ G + + + L + + + ++ G Sbjct: 717 LLDDSFKQKQAMTVMWLDLDNFKTINDSLGHQVGDLILIEVANRLRFELGKQSIISRIAG 776 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 VL E + + RQI +N+ L + + ++ L+ Sbjct: 777 DTFAAVLP-LTNEHSAALIAKNVLEVVQRQIKFNSHILSISPSIGLAISPNDGQSADKLI 835 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 ++ + + + + + L ++ AL L QP Sbjct: 836 MCAETAMYRAKHDGRN-TFRFFAQEMQEHSLRSLQLSIALKEALTNDQFHLVYQPQMSLS 894 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 N G + +L + G ++P +F+PL Q L + V++ + + + Sbjct: 895 NNSMVGAEALLRWEHPEWGTVSPAEFIPLAEQSGLIVQIGEWVIQQVAQQQKSWLERGLP 954 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL L Q ++ I L ++ + P+ + +E+TE A + E + I+ L Sbjct: 955 EVIIAVNLSALQFHQPDLVETITSLVRKAGVVPENIEVELTEAVALKDPEVAGTTIDALS 1014 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + GF+++IDDFGTGY++ LK+ +KID F+KDIVT+ D IV +I +A + Sbjct: 1015 RAGFKVSIDDFGTGYSSMSYLKKFAVHKLKIDQSFIKDIVTDIDDQAIVTAIIQMAHSLH 1074 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + +AE VETQ+Q L K G + +QGY RP Sbjct: 1075 KTTIAEGVETQEQLDFLRKKGCEEMQGYWYSRPL 1108 >UniRef50_Q2SDR7 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDR7_HAHCH Length = 636 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 85/480 (17%), Positives = 177/480 (36%), Gaps = 16/480 (3%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 L + + + ++ + + ++ Sbjct: 142 LTRLWEFNKRFNQRSSYCLLEMKDGRFIDCYTNPRIHEGKVLGRVWSLSDITELKLSEQQ 201 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRV 373 + D LT LPN + + + L +D + ++ GL Sbjct: 202 ALFHSYHDNLTGLPNRTLFHERLTHAIERRGVQQRDLAVMFLDLDGFKDINDSTGLETGD 261 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNN 430 ++ + + + + + G E +++L +T + L S R ++ Sbjct: 262 QLLQMAAQRIKETLPPETTVARYGGDEFIVLLENIKTSFEATLVSERLRSAIDRPFTVDD 321 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + + + L+ + + + + T+ ++ Sbjct: 322 QTFHLTCSIGIALYPTDSRDADALIRKADMAMNHAKSRGRNNC-QFFADEFEILTSHRLR 380 Query: 491 LLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + N +++AL++ + L QP G + ++ + G +++P +F+P + L Sbjct: 381 IRNNLKSALEKNEFNLLYQPKIALHSNMIIGVEALIRWRRPSGEVVSPAEFIPAAEENGL 440 Query: 548 SARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 V E K L + ++N+ P +I I + +RY + P+ Sbjct: 441 IIDIGNWVTEEACKQLQRWGRENHHNFSVAINISPFHFQHADILSTITQALRRYSVRPEL 500 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + +E+TE + E ++ + +L K G ++DDFG GY++ LKRL D +KID +F Sbjct: 501 LEIELTESALMEDIEHTIEILAELRKLGISCSVDDFGAGYSSLNYLKRLPVDTLKIDKMF 560 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + DI + D +V ++ +LA + VVAE VET++ LL + QGY RP Sbjct: 561 IDDITKSQRDLALVDTMINLAHHLDMLVVAEGVETEETVHLLKEKRCDLAQGYYFSRPVS 620 >UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UG16_METS4 Length = 990 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 89/451 (19%), Positives = 168/451 (37%), Gaps = 19/451 (4%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + + ++ + R A D LT LPN + Sbjct: 506 VVSRAPDGTARRVVGTHIDITARKEAEARVTHMARHDTLTDLPNRALFRERLEQRLAEIR 565 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 L +D + ++ G + +R I R +++ + + +L G E ++ Sbjct: 566 RHGGHCVLLALDLDAFKAVNDSLGHLAGDALLREIARRFRSVLRAEDTVARLGGDEFAIL 625 Query: 405 LSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L G + L + + + +G + E L Sbjct: 626 LGGTPRLESVMDFAERLVASVREPVTLEGQQVGVGVSIGIAIGPEHGEDADTLFRHADRA 685 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 ++ + E + ++ L ++ AL +G+ +L+ QP+ + + Sbjct: 686 LYRAKSDGRN-TFRFFEPAMDRAAEERRRLELDLQLALRRGEFVLHYQPVLDVASRAIVA 744 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 + ++ G + P F+PL + L VL + + P R +VN Sbjct: 745 VEALVRWNHPTRGQLGPGVFIPLAEETGLIVALGEWVLRTATRDARHLPE---HVRVAVN 801 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + + ++ + +SP + LEITE ++ + L + G +A Sbjct: 802 ISAVQVRHASLGQTVRAALDAAALSPDRLELEITESVLMGDSSLVRDALSGLRELGTHLA 861 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L++ D +K+D F+ I + I+R+I L ++V AE Sbjct: 862 LDDFGTGYSSLSYLRQYPFDRLKVDRSFIASIP-DQGTVTILRAIVGLGTGLGMTVTAEG 920 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q A + G +QGYL G+PQPL D Sbjct: 921 VETPAQFAFVEAEGCAQVQGYLTGKPQPLPD 951 >UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5V4_NITSB Length = 793 Score = 580 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 95/455 (20%), Positives = 193/455 (42%), Gaps = 18/455 (3%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 S+ I L + + + A DPLT L N + Q Sbjct: 334 SIFAIKDPLTNKITHYAAITKDITELAKKQETIQKLAFYDPLTKLANRVSFLQTLDEFIA 393 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + + +DN + ++ G +++ + L L++E + +L G E Sbjct: 394 LGKRESFPFALLFIDLDNFKEINDTLGHDTGDKLLQAFVKRLKSLLREEDIAARLGGDEF 453 Query: 402 LLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +++ G + + + L + + ++ + + F + + LL Sbjct: 454 VVLAPGISSPSKALELACRLQNAFQQPLMVDDRPITVQMSIGIALFPQDAKNANELLKAA 513 Query: 459 SWLAEQSC-AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-- 515 ++ + + E + + ++V L ++ A+++ +L+LY QP + Sbjct: 514 DIAMYKAKEKKNRCVLFQ---ENMQQEALEKVTLKQELKKAIEKNELMLYLQPKISVRTK 570 Query: 516 -GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 EG++ ++ G + P KF+PL + L + + + + L + Sbjct: 571 KVEGFEALIRWNHPTRGFIPPSKFIPLAEESALIIPLTEWIFQEVDRLLDQLQQNGIESP 630 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++N+ + +I K+ +I + LE+TE + +M+ +++LH FG Sbjct: 631 IAINISARHFATDKLIEQITTNIKKEYIQKGLIELEVTESAVMEDINKAMHYLQKLHSFG 690 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++A+DDFGTG+++ + LK+L D IKID F+ I+ + D IV S ++A + Sbjct: 691 IKVALDDFGTGHSSLQYLKKLPIDTIKIDKTFIDHIINDNKDQAIVESTIEMADKLGMDT 750 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET++Q L K+G+ Y+QGY +P P + Sbjct: 751 VAEGVETKEQAQFLEKIGIDYIQGYYYAKPMPFEE 785 >UniRef50_Q2W5V0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W5V0_MAGSA Length = 820 Score = 580 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 97/487 (19%), Positives = 169/487 (34%), Gaps = 17/487 (3%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 L + L L N+ + + + + L + + Sbjct: 326 LGDFWRTLLGQGELQGELQVNRQDGTWQWQQVHGSKVATPGEEGT-HYLLQIEDVTLRKD 384 Query: 318 LNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGL 369 RR QAL D LT LPN R ++ A + + +D + ++ G Sbjct: 385 QERRLQHQALFDGLTDLPNRVHALDRLAREIDMARDHGRKVGLLFVDLDGFKAINDSLGH 444 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQI 426 + L + + + G E L+++ E + + S+ Sbjct: 445 EYGDELLVLAAERLRQAAGDGGVVARFGGDEFLVIMGDMEDGAAAGEVAAAIVDRFSQPF 504 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + L + + T Q LL Q+ ++ + Sbjct: 505 TISRRDLISTASIGLALYPEDGRTQQTLLRNADIAMYQAKLAGRNR-FCFFTSRMNEEAE 563 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++ + +R A+ L QP+ G + +L + G + PD+F+P Sbjct: 564 ARLRMEGELRRAVGTDQFHLVYQPLVAVATGRAVGVEALLRWSNPELGNVPPDRFIPQAE 623 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + VLE+ + D R +N+ P G + + Sbjct: 624 TCGVIVAIGRMVLETACRDARRWVEDGHADLRLCINVSPRQFQDAGFLGDVRAALAGSGL 683 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 SP + LEITE + + L G +++IDDFGTGY++ L+R D +KI Sbjct: 684 SPANLELEITEGLLLTERGDVDTLLRTLTDMGVKLSIDDFGTGYSSLSYLERFPFDTLKI 743 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F+ ++ ++V +I +A L V+AE VET +Q A L + QGYL Sbjct: 744 DRSFMIGMLERQERKVLVETIVAMASGLGLEVIAEGVETAEQMAHLAAINCDIAQGYLFS 803 Query: 723 RPQPLAD 729 RP P D Sbjct: 804 RPVPAGD 810 >UniRef50_D1RFR0 Response regulator/GGDEF domain/EAL domain protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RFR0_LEGLO Length = 750 Score = 580 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 98/447 (21%), Positives = 181/447 (40%), Gaps = 18/447 (4%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 L + ++ L +R QAL DPLT LPN L + Sbjct: 292 LYDVIIGRVWSFHDITERANLEKRLTYQALHDPLTQLPNRALLIDRIRASIDNAQNLKLK 351 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + +D + ++ + +R I + L+Q+ + L ++ G E ++L + Sbjct: 352 FAILYCDLDRFKLVNDSLSHEVGDTLLRMIGQRWGLLVQDGDILARMGGDEF-VMLCHID 410 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + N + N L + + + ET LL Q+ Sbjct: 411 DVDTVYTIANKILNSLKEPFKITNRNLFITTALGISIYPQDGETANDLLKNADLAMYQAK 470 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG---YDEIL 523 + + + LL + AL+ + L QP N + +G + ++ Sbjct: 471 EQGGNQ-FSFYDVRLYEHYKQCFLLEAELHNALNNNEFFLAYQPQFNIDQQGLLSVEALI 529 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPL 582 + G++ P F+P + L +L + + + + + +VN+ Sbjct: 530 RWNHPEKGVIFPMDFIPFTEETGLIIPIGEWILREVCRQIDMWHKKNLPYVQVAVNITSR 589 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 LLQ N + Y ++P + EI+E ++ + +Y + QL + G +IA+DDF Sbjct: 590 QLLQPNFIDFVKNTLNEYQLNPHHLEFEISENVVITHPD-IIYMLNQLKQLGIKIALDDF 648 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTG ++ LK+L D IKID FV+ I T+ D +I+ +I +A++ + V+AE VE+Q Sbjct: 649 GTGNSSINYLKQLHIDCIKIDQSFVQSIPTSHSDGVIIEAIISMARSFNFKVIAEGVESQ 708 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L K +QG+L P + Sbjct: 709 EQLDFLKKQHCDQVQGFLFSEPLTPKE 735 >UniRef50_C3XA65 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3XA65_OXAFO Length = 999 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 89/463 (19%), Positives = 181/463 (39%), Gaps = 17/463 (3%) Query: 283 QGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + + V+ + + +++R + A D ++ LPN R Sbjct: 495 HTNGSIFPVEISSRVIETDGRLFVQFIIRDISEKKKAEEMVWRHANYDQISGLPNRRMFT 554 Query: 342 Q--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + A +A + L +D+ + ++ G + ++ L ++E + + Sbjct: 555 EKLFFETRKAQRSDASVALMFLDLDHFKDVNDTMGHGVGDCLLKEASDRLRVCVRETDTV 614 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E +++S + ++ + + S + + F + + Sbjct: 615 ARLGGDEFTVIVSDIDDFKDVERVAQCILDELSEPFTLEGQSVHISASIGITFFPQDAKD 674 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 L+ + + + K++ ++N + AL+ QP Sbjct: 675 THDLMKNADQAMYAAKSLGGNQ-YHYFTPSMQEAVQKRMHMINDLHVALENNQFETVFQP 733 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 I + + + ++ G++ P F+PL L F V K + Sbjct: 734 IIDLKTGDICRAEALIRWHHPVHGLINPASFVPLAEDTGLIQAFGDWVFLEAAKAASRWR 793 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRI-IRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 + SVN+ P+ + I + K ++ P+A+++EITE E + Sbjct: 794 KYVPDFQVSVNISPVQFKNEGIDTNVWFAHLKSLNLPPEAIVIEITEGLLLDIDEHTSNQ 853 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L G +A+DDFGTGY++ LK+L D +KID +FVK++ T+ D ++ ++T + Sbjct: 854 LLALSDAGIEVALDDFGTGYSSLAYLKKLDIDYVKIDQMFVKNLTTSEEDRVLCEAMTVM 913 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A ++V+AE VET Q +L Y QGY I P + Sbjct: 914 AHKLDIAVIAEGVETLAQLRMLASFNCDYGQGYYISGPVNDEE 956 >UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43017 Length = 573 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 98/443 (22%), Positives = 179/443 (40%), Gaps = 17/443 (3%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 +L M + + A DPLT LPN R E + + Sbjct: 122 GAVVLGMKKSAAECSEQQDEVYRLANEDPLTNLPNRRCFMNYLENKLLHAASSKEKLAVL 181 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D ++++ G + ++ I L + E + +L G E ++V++ + + Sbjct: 182 FIDLDRFKYVNDTLGHLFGDRVLKHIAERLQAHLPEKSMIARLGGDEFVVVMTDVKEKEE 241 Query: 414 LQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + + N + LL ++ A Sbjct: 242 PVSLTEDLLTIIREPLIMDGFEFTLTGSVGIALSPENGIDAEALLTSADAAMYRAKAKGS 301 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 L+ V + ++ + N +R A+D+G+ LY QP + + G + ++ Sbjct: 302 DR-LEVYNRDVYQEFSRYFHVENDLRKAIDRGEFALYYQPQFCLESGDVCGEEVLVRWKH 360 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQ 586 G ++P +F+ + + L +L + A + SVNL LQ Sbjct: 361 PIEGTISPGEFISIAEETGLIIPIGEWILREACRQKAKWINEGYPKVPMSVNLSLKQFLQ 420 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 NI I ++ K + P+ + LEITE + + ++ + QL K G RI++DDFGTGY Sbjct: 421 HNIVHTIEKILKETKLPPEYLDLEITESVTV-DLDRTLDILNQLIKVGVRISLDDFGTGY 479 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ + + +L +KID FVK I I+ I L ++ L V+AE VET++Q Sbjct: 480 SSLQYVGQLPVHELKIDQSFVKKIGKGKEGEAIISMIIHLGRSLELKVIAEGVETKEQLD 539 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K G +QGY +P + Sbjct: 540 FLQKQGCDLVQGYYYAKPLSTEE 562 >UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GAF n=1 Tax=Deinococcus deserti VCD115 RepID=C1D398_DEIDV Length = 960 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 90/429 (20%), Positives = 179/429 (41%), Gaps = 16/429 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 L + QAL D LT L N + E++ ++ + + +DN + ++ Sbjct: 529 EHHHLTEQLKYQALHDALTGLANRQLFEESLQRALDAAQHVGGELAVLFIDVDNFKSVND 588 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI--LNS 423 G +R I L +Q + + ++ G E ++L L+ I + S Sbjct: 589 SLGHEAGDQVLREIASRLKGCVQHGDTVARISGDEFTVILPFASESDALEVARQITEVLS 648 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 +H + + + + L + + ++ ++ Sbjct: 649 DPMHVVDRQIKVSASIGITLTPEGGSDPEMLHRTADLAMYHAKS--RKMSFAVFRSEMNR 706 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 + ++ L + +R A + D L+ QP+ + + G + ++ + G ++P++F+P Sbjct: 707 RAYERFQLTSFLRQAAEHNDFELHYQPLIRLFDGQLTGVEALVRWQHEELGAVSPERFIP 766 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L VL+ + R +VN+ L ++N + R + Sbjct: 767 LAEETGLIESIGAWVLKEACRQGVLWQAQGHSQLRVAVNVSALQFERRNFVETVARCLEE 826 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + + LE+TE E S++ + QL G I++DDFGTGY++ L RL +I Sbjct: 827 TGFPAEQLELELTERVIMRQVEESVWRMRQLRDLGVWISVDDFGTGYSSLSYLPRLPINI 886 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV + + +V++I LA++ L +AE +ET ++ ++L LG QG+ Sbjct: 887 LKIDRSFVTGLSETSPTFPVVQAILSLARSLHLEAIAEGIETNEELSVLKHLGCDLGQGH 946 Query: 720 LIGRPQPLA 728 GR +P + Sbjct: 947 FFGRAKPAS 955 >UniRef50_A1TQ27 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=5 Tax=Comamonadaceae RepID=A1TQ27_ACIAC Length = 962 Score = 579 bits (1493), Expect = e-163, Method: Composition-based stats. Identities = 123/651 (18%), Positives = 219/651 (33%), Gaps = 40/651 (6%) Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGI-KCSMYLVGSFFDFPLKISTFFGDADAIFTVVD 168 +R +RL ++ G FD L + I + Sbjct: 310 SRDAAEPAPHLSGERLRAARVLIVGGRPWTLTMEPLPAFDHRLGRDNY----ALIAWLGA 365 Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL- 227 L S+ I + + AQ + E + L Sbjct: 366 LFSVLAGWFIAMQATGH----QRALALAQSMTSELRTARDNLEGILQAVPDLLVELDAGG 421 Query: 228 -LLLCTPYENDFIAGYLV-----PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + +D A + ++ + +L + Sbjct: 422 RIHYHRSARSDLSAEPSQAFEGRMLAEVLPPGVASEFMQALREAESQGVSLGRQYHQDTA 481 Query: 282 LQGVETEYSLA-----FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + E S+A A + + + R H A D LT LPN Sbjct: 482 MGQRWFELSVARRLGVDSAAGQGGGASRYVALARDITARRDAEAAMHRMAYYDALTGLPN 541 Query: 337 FRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 R L + + + + +DN + ++ G + + R L L+Q Sbjct: 542 RRLLFEQLQDALDQARSGGRIGALFFIDLDNFKQLNDARGHAAGDRLLVQVARRLERLLQ 601 Query: 389 ENEKLYQLPGSELLLVLS--------GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAA 440 + ++ G E ++++ G + G + + +T + Sbjct: 602 GFGSVVRIGGDEFVVLIPRIANGMQAGVDAAGAMAARLREGMEAPYDLGSTYYSVTASTG 661 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F ET++ LL + ++ + + E + +++ L + A+ Sbjct: 662 VTLFPKAGETVEDLLREADTAMYRAKSSG-AHRVRFFEADMQAAAQERLSLEQDLAQAIA 720 Query: 501 QGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 L ++ P + G + +L G ++P +F+ + + L R +V+ Sbjct: 721 DDALEIHIHPQVDRDGAVCGGELLLRWRHPAHGNVSPARFVAIAEESGLILRLGARVIRR 780 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 LA SVN+ Q++ + +ILE+TE Sbjct: 781 ACDALAQLHAAGLDMTISVNVSARQFRQEDFVAYVRDALAYSGAPASRLILEVTETLLVE 840 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N + + + +L +FG R +IDDFGTGY++ LKRL +KID FV+D N DA Sbjct: 841 NWQDTARRMAELVRFGVRFSIDDFGTGYSSLAYLKRLPLYELKIDRSFVQDAPVNPNDAA 900 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I +A+ L VVAE VET+ Q L + G +QGYL P PL + Sbjct: 901 IVRAILSMAQHLRLRVVAEGVETETQAEFLARHGCDAMQGYLYAHPLPLKE 951 >UniRef50_B0CBA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=66 Tax=cellular organisms RepID=B0CBA7_ACAM1 Length = 705 Score = 579 bits (1493), Expect = e-163, Method: Composition-based stats. Identities = 92/448 (20%), Positives = 169/448 (37%), Gaps = 28/448 (6%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAG 349 + V + + AL D LT LP+ + Sbjct: 243 KNRVVRMAGSHTDLT---------NHVALYDHLTGLPSRALFLDQLHRTLTRVNRQTNYL 293 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L D + ++ G + + + + L ++ + + +L G E ++L Sbjct: 294 FAVLFLDCDRFKVINDSLGHAIGDQLLIEVAQRLTTALRPGDVIARLGGDEFAILLENIA 353 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + + LN + + + + + LL ++ Sbjct: 354 GQDQAEQVASRLNRELEKAFELQGHTVYISASIGIALNSDHSPQAENLLRDADNAMYRAK 413 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEIL 523 A E + + + + +R A+ + LY QPI + E + ++ Sbjct: 414 ALGKSR-YVVFEAAMRDRVQALLRVETDLRAAIANQEFQLYYQPIISLKTHEIVSLEALI 472 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLM 580 G+++P +F+P+ + L VLE + L SVNL Sbjct: 473 RWQHPQRGLISPQEFIPVAEETGLILAIGQWVLEESCQQLWQWHQTLTEIPPLSISVNLS 532 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 Q ++ +I + +S + + LEITE N I QL G ++ ID Sbjct: 533 RKQFSQASLGKQIQSILSETGVSARHLKLEITETMIMENEVMVSELISQLRALGLQLQID 592 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L D +KID F++ +VT+T + IVR++ LA ++ +AE VE Sbjct: 593 DFGTGYSSLSFLHNFPLDTLKIDRSFIEGLVTDTEKSEIVRTMITLAHNLGMTAIAEGVE 652 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 TQ Q L + +QGYL+ +P A Sbjct: 653 TQAQLQWLQQHHCDCVQGYLLSKPLSAA 680 >UniRef50_A4VKH7 Sensory box/GGDEF family protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKH7_PSEU5 Length = 708 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 117/558 (20%), Positives = 206/558 (36%), Gaps = 28/558 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVPVFFIIFTL 253 R + E R ++ A+ + Y + Sbjct: 137 ITAQRAVLEALEQAELRYRSIFENASEGIFQSTRDGRYLAANPALARIYGYDSASELVAD 196 Query: 254 GVGKLRYPFLNLTWAVSTLCL-------LNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 R ++ + L LN+ + T ++ V+ + + Sbjct: 197 LADIERRLYVQPGRREAFCQLMEQHGEVLNFESEVYRRDCTRIWISENAHVVRGPNGEFI 256 Query: 307 ---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 V+ + ++ QA D LT LPN L EQ ++ + Sbjct: 257 CYEGTVQDISERKHYQQQLERQANHDLLTGLPNRILLNDRIEQGLARAARLGYYLTLVFI 316 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +DN +F++ G + ++SI L ++ ++ + ++ G E +LVL + Sbjct: 317 DLDNFKFINDGLGHVAGDELLKSIAARLAGSLRGSDTVARVGGDEFVLVLGDHYRISTVI 376 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ + R + +G F + E Q LL + Sbjct: 377 SLLERVLNEIRRPVTLAGREFQVGASLGVAMFPDDGEDAQTLLKHADIAMYAAKKRGRN- 435 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDG 530 ++ +++ L +RTAL++ + ++ QP + G++ + D Sbjct: 436 NFQFFTHDLNRIADERLNLEAAMRTALERDEFAVHYQPKVDAQRRIVGFEALARWTHADL 495 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNI 589 G++ PD+F+P+ + L L VL ++ +VNL PL L ++ Sbjct: 496 GVIGPDRFVPVAEESGLIMPLTLAVLRRAFSDARRWNAGRQVPLLVAVNLSPLLFLGDDV 555 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R++ + +SP V LEITE + ++ + GFR+A+DDFGTGY+ Sbjct: 556 VERVMAVLDEVGLSPLLVELEITETVFLGDGSRAVSILADFKARGFRLAMDDFGTGYSAL 615 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+R DIIKID V + AMI R+ L K+ +VVAE VE Q L Sbjct: 616 GYLRRFPLDIIKIDRSLVTGLEQEDEVAMIARAAISLGKSLHKTVVAEGVENAAQFEFLR 675 Query: 710 KLGVQYLQGYLIGRPQPL 727 G QGYL+ RP P Sbjct: 676 HNGCDEFQGYLLSRPLPA 693 >UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UHK4_RALPJ Length = 1183 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 100/482 (20%), Positives = 177/482 (36%), Gaps = 19/482 (3%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSE 316 + A+ + + + F+L+ + + + E Sbjct: 688 PALNEVRTALRDESEIRVLLRNFRKDGHAFLNNFLLSPVRDAKGAVTHYVGIQDDVTEQE 747 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 R A D LT LPN L Q + + ID + ++ G Sbjct: 748 MTRTRLAQHATIDSLTGLPNRTLLADRVQQSVEMAARQRSRFYVALVNIDRFKVVNDSLG 807 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHW 428 ++ +R + L + + + G LV+S + G L + + Sbjct: 808 HLLGDEVLRRVAERLRDAADTVDTVARFGGDVFALVISHAGSRGV--DFGFDLFAEPVRV 865 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + + L+ + + L+ + + + Sbjct: 866 EGHEVFVTASIGVAEYPAHGADADSLIRHAEMAMYYAKQNGRNR-LEFFAPEMDIGVSYR 924 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L + IR L+QG L QP + G + ++ + G++ P F+P+ + Sbjct: 925 LNLEHQIRATLEQGQFRLLYQPQIDTKTGRVCGLEALIRWIHPTRGLLPPAAFIPVAEES 984 Query: 546 NLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL + A +VN+ PL + + +++L ++Y + Sbjct: 985 GLIVEIGNWVLTEAARQRAEWHKRGLADDLTLAVNVSPLQFKRGTVLPTLLKLQRQYGLG 1044 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + LE+TE E ++ ++ + + G RIAIDDFGTGY++ LKRL D+IKID Sbjct: 1045 SGFLELEVTESMLMEGTERTIEDLTAIRQLGVRIAIDDFGTGYSSLAYLKRLPIDLIKID 1104 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FVKDI ++ DA I ++ LA + V AE VE Q A L LQGY Sbjct: 1105 RAFVKDIDRDSNDAAICTTVVVLAHNLGVKVCAEGVEDAAQSAFLASHQCDVLQGYYFSE 1164 Query: 724 PQ 725 P Sbjct: 1165 PL 1166 >UniRef50_C6MQF9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MQF9_9DELT Length = 705 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 97/576 (16%), Positives = 208/576 (36%), Gaps = 25/576 (4%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + + + + + L R +A E+R T+ + + L + Sbjct: 115 VNYPELFRILDRVGEKLTLRRLVARQVAALRASEQRFSTIFQATPDLLSIASLQDGRLVE 174 Query: 238 FIAGYLVPVFFIIFTLGVG---------KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 +L + F + P L + + E Sbjct: 175 VNEAFLRALGFDRQEVIGRTPEELGLWLDAGEPAALLQALAEKGAVRDLEVRLKAKNGQE 234 Query: 289 YSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----- 342 + + LL + + + L + QA DPLT LPN + Sbjct: 235 LEGLVSADSIEMEGNPFLLTLFKDISERKRLEQIIKHQAQHDPLTDLPNRKLFMDFLALE 294 Query: 343 ---APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 A + + L +D+ + ++ G ++++ + L ++E++ + ++ G Sbjct: 295 LAQARRNKKSLAVLFLDLDHFKQINDTLGHAAGDLLLQAVAQRLKRCVRESDTVARIGGD 354 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +++ + +V+ + + F + E+ + LL Sbjct: 355 EFNVLMPDLAQTDDVGTVVSKIMGVFGPPFRLEGIEVQASTSLGVSMFPDDGESCEELLQ 414 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 + + + + ++ +T + + +R A+ +G+L L QP+ N Sbjct: 415 KADGAMYVAKQSDGN-SYQFYNDEINARTVSRQNMEMRLRQAVSRGELELVYQPLLNLGT 473 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 + +L + G++ P +FL + + V+ + Sbjct: 474 GRISAAEALLRWHHPERGLLFPAQFLTVAEETGAIVPIGEWVIHQACTQMKEWQEQGLDL 533 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VNL N + ++P ++ ++I E NA + ++ +L + Sbjct: 534 SLAVNLSNREFHHPNFLEMTMTALSETGLAPGSLEMDIPERAIMDNASLPVKDMLRLTEA 593 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++DDFG G ++ +R+++L +KID F++DI+T D +V ++ ++ + L Sbjct: 594 GVAFSVDDFGIGSSSLQRIRQLPIAKLKIDRSFIRDILTEPGDLDVVSAMICMSHSLKLR 653 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V A VE Q AL+ G +QG LIGRP P A+ Sbjct: 654 VNAVGVEAPGQLALMEDYGCDEVQGDLIGRPLPAAE 689 >UniRef50_C6WT76 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT76_METML Length = 865 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 126/638 (19%), Positives = 237/638 (37%), Gaps = 39/638 (6%) Query: 125 LFWLGLVTPIGIKCSM---YLVGSFFDFPLKISTFFGDA--DAIFTVVDLLSLFTAVLIY 179 + + ++ P+ I SM + GSFF L + + F DL ++ + Sbjct: 218 ILSMFVILPMLIWASMSFGLVGGSFFVIILSSIAVWVTSQGSGNFYSHDLSEGVFSLWTF 277 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE---- 235 + +I + + L I + K + ++ A +++ L + Sbjct: 278 MVALVVTMLLISALQSERNLAHMTIQKNDKKLRSVIDGAFDAIVTIDSAGLLVEFNPAAE 337 Query: 236 -------NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 D + + + + +T V+ + ++ +E Sbjct: 338 RIFGYKKEDVLGKSMPDLIIPARYRNAHHAGHQQYKMT-GVTHIFNQRIELVGMRADGSE 396 Query: 289 YSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 + + L L ++ L+ VR + + A D LT LPN R L + Sbjct: 397 FPIELTLTALKDNNLSLVTGFVRDISEQKRARQEIENFAYYDALTSLPNRRLLADRYQHA 456 Query: 348 AGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +D + ++ G + + + + ++ + + +L G Sbjct: 457 MSIAQRAKTYCALLFIDLDKFKVLNDTKGHDVGDQLLIEVAHRIQHTVRAGDTVARLSGD 516 Query: 400 ELLLVLSGPETE-----GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L + ++ + L + R + + F+ N T Sbjct: 517 EFVVILESLDQNASIAYQQVSEIAQKLLAELNRNYYLSLFEFATSASIGVTLFNDNALTF 576 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L S +++ K L + AL +L L QPI Sbjct: 577 EDHLRHADTAMYLSKDSGGN-TYRFYDQLTQESIEKNFALEAALGLALANQELYLNYQPI 635 Query: 512 RN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N K+ + +L G ++P +F+P+ + NL + VLE + L T Sbjct: 636 VNVAKQVVAAEVLLRWSHPTLGNVSPVEFIPIAEKSNLIIKIGHWVLEQACEQLKTWEAS 695 Query: 570 --KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + SVN+ L N + + R I+P + LE+TE N + ++ I Sbjct: 696 PVLGQIKLSVNISAKQFLYINFVQELREILARTGINPSLLKLELTETAVIDNMDDVIHKI 755 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L + G RIA+DDFG G+++ LK+L IKID FV D++T++ DA I++ + + Sbjct: 756 GILRQMGVRIALDDFGIGHSSLVYLKKLPVTQIKIDQSFVHDVLTDSNDAAIIQMVLAVG 815 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 K +VAE VE +Q LL + G Y QGY RP Sbjct: 816 KTIHCDIVAEGVEQVEQFELLREFGCDYFQGYYFSRPV 853 >UniRef50_C1AC92 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC92_GEMAT Length = 556 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 104/503 (20%), Positives = 181/503 (35%), Gaps = 30/503 (5%) Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQG--VETEYSLAFILAVLISFSVCLLYMVRIY 312 +P Q L+ A +++ + + + R Sbjct: 40 ASDFVHPDDLALVQQRLTSGPARVQYRLRRLDDGIREVEAVSVSIAFEGTPAMQTLFRDV 99 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEFM 363 + L R A D LT L N E + L +D+ + + Sbjct: 100 TERKELEARLLHGAFHDALTGLANRALFRDRLEHALQVAGRDPDHRIAVLFLDLDDFKGV 159 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + G +R++ ++ ++ ++ + + G E ++L TE +VN + Sbjct: 160 NDSLGHDAGDQLLRTVSERIMAEVRASDTVARFGGDEFAVLLERLPTESEALTIVNRIKV 219 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 R + + + + + + LL ++ E Sbjct: 220 ALRRPLMLEGRLMSVATSVGVA-YATPADDVDTLLRNADVAMYEAKEAGKAR-HAVFEPS 277 Query: 481 VSGQTTKQVLLLNTIRTAL---DQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMT 534 + +++ L IR A ++ L L QPI + G + +L G +T Sbjct: 278 MYAAIVQRLQLEADIRMAAGAPERSGLFLAYQPIVDLRTGAVRGLEALLRWDHPTRGTVT 337 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--------KKGPRFSVNLMPLTLLQ 586 P F+P+ + VLE L P SVN+ L + Sbjct: 338 PSVFVPVAEHTGVIVPLGRWVLEQACTQLMAWRTQWWRERRQPDSVPSVSVNISGRQLAE 397 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ + + +R ++ LEITE N ESS+ + L G R+AIDDFGTGY Sbjct: 398 EDFVDEVAAILQRTGAPAGSITLEITESVIMRNTESSLRTLSALKALGLRLAIDDFGTGY 457 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L++ D++KID FV+ + DA + R+I L L VAE VET QQ Sbjct: 458 SSLSYLQKFPVDVLKIDRAFVEGVAQGGSDAALARTIVTLGTTLGLRTVAEGVETSSQQE 517 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L +G QGYL +P+ + Sbjct: 518 ALEAMGCVDGQGYLFSPARPVDE 540 >UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZY8_9NEIS Length = 718 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 163/442 (36%), Gaps = 22/442 (4%) Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNL 360 + + + QA D LT LPN R + +Q + + +D Sbjct: 268 ILDITDRKRSEKTIWHQANYDLLTELPNRRLFLERLQQGIEHAKGSGSALALMFIDLDRF 327 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + + + ++E + +L G E ++L ++ + Sbjct: 328 KEVNDMLGHKVGDQLLSQAGQRIADCVRETGLVARLGGDEFTVILENLSQPTPIEQVAQS 387 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + S+ + + + + + LL + A Sbjct: 388 IIETLSKPFQLGPDVAYVSASIGVTLYPKDAQDMDTLLINADQAMYHAKALGKNR-FCYF 446 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + +++ L + +R+A+ QG L +Y QPI + + ++ G ++ Sbjct: 447 VPSIQAIFAERLQLGHDLRSAMAQGQLDVYYQPIVDLATGHIVKAEALVRWHHPRRGWIS 506 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCD------KKGPRFSVNLMPLTLLQK 587 P +F+P+ L V + S+N P Sbjct: 507 PAQFIPIAEDIGLINGIGDWVFRRAAGMAKRLWESGCSGTPAGAPLQISINKSPRQFFTG 566 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I + + + + +EITE ++Q + G ++++DDFGTGY+ Sbjct: 567 HAHETWIDHLQEIGLPAECIAIEITEGLLLDERPDVTSKLQQFRRAGVQVSLDDFGTGYS 626 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 LKRL D +KID FV+D+ + D I +I ++ L VVAE VET++Q+ L Sbjct: 627 AMAYLKRLDIDYLKIDQSFVRDMTSTPSDRAITEAIIAMSHKLGLRVVAEGVETREQRDL 686 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G + QGY R P + Sbjct: 687 LSAAGCDFGQGYWFSRALPEDE 708 >UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative n=2 Tax=Cyanobacteria RepID=B0CC32_ACAM1 Length = 886 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 100/557 (17%), Positives = 201/557 (36%), Gaps = 29/557 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI-IFTLGVGKL 258 + + P + + + S + + + +L I + + Sbjct: 315 YFLQVTPLQDQHGLDWLSVLVIPESSFMAQIDANTRTTLLLCFLALGCAIYLGVCTASWI 374 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL---------AVLISFSVCLLYMV 309 P L + A + ++Q E + A L + Sbjct: 375 ARPILRFSQASQAISSGQFDQTVAVKGFKEIGVLQQSFNRMAEKLQATFSDLEAANLALT 434 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNL 360 + + ++ AL DPLT PN + E+ + + +D Sbjct: 435 KEVAERQRAEEQFKHLALHDPLTGFPNRAFFMEQLERAVKQTQRHSQYLFAVLFIDLDRF 494 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + +I L L++ + + +L G E +++L E + + Sbjct: 495 KIVNDSLGHEVGDQLLGAIAHQLHSLVRATDIVARLGGDEFVILLEPIEEVNDAVRVADR 554 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + S I +N + + + +L ++ + Sbjct: 555 IVQELSAPIDLSNRQVFISASVGIALSSPDYSQATDILRDADIAMYRAKNRGKA-CFEIF 613 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 E + Q ++ L N +R A+ L ++ QPI N + G++ + G + Sbjct: 614 NERMYTQALDRLQLENDLRQAIANQQLQVFYQPIVNIQTGKLSGFEALGRWPHPQRGFIP 673 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAG 591 P +F+P+ + L +L+S + +AT SVN+ L N+ Sbjct: 674 PTEFIPIAEETGLIIPLGEWILQSACQQMATWLQTYPSAVKYTISVNMSIKQLKDPNLLT 733 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ R ++ ++ + LE+TE N + QL + G +++IDDFGTGY++ Sbjct: 734 KVDRALEQSGLNRHQLSLELTESILMENVIELKVILNQLKERGIQLSIDDFGTGYSSLSY 793 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L + IKID F+ I + I+ +I +LA ++ ++E VE++QQ L KL Sbjct: 794 LHLFPFNTIKIDQSFITRIGAQGENQEIIETIINLASQLNMDAISEGVESKQQLNYLKKL 853 Query: 712 GVQYLQGYLIGRPQPLA 728 Q QG +P Sbjct: 854 LCQKAQGNYFSQPLSSD 870 >UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGP3_OLICO Length = 825 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 137/785 (17%), Positives = 277/785 (35%), Gaps = 70/785 (8%) Query: 6 NLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIF------ 59 + ++ LA + V+ + + A + + L W ++ ++ Sbjct: 9 QTQHDWRLVLLAAGVCVLASIATINMYQRARANKAKSRLFWTLAAGLVCGCGVWSTHFIG 68 Query: 60 ------GWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 G M + ++ A + G +T+ L I+ + Sbjct: 69 MLAYSPGVPITFDFTMTMVSFAVAVVMMTAGFVAAIYGERTWSSLVGGVIVGIAISVMHH 128 Query: 114 YGLTSRYVWQRLFW----LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 G+ + + + W L L GI S + + + A + Sbjct: 129 LGIVALRMSADIVWMPDLLVLSAVCGIVFSTLSLFTVRQGTAITHSGIAAALLATATLSD 188 Query: 170 LSLFTAVLIYNM--------LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF------ 215 + + + + +S + ++R+ Sbjct: 189 HIIAVSAIGLIPDINTVSDEAGLSPIVLSISVASMMVAIVIACLIGAISDRRSRRHMNER 248 Query: 216 TLSWLAALSVLLLLLCT--------PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 + AA+ ++ LC + + +++ Y + F Sbjct: 249 NIQLNAAIQNIMQGLCMFGPDNCLQLWNDKYVSMYR---IAPEDIRVGATVEELFAARKK 305 Query: 268 AVSTL-CLLNYNQNFLQGVETEYSLAFILAVLISFSVCL----------LYMVRIYHRSE 316 A + + L Y+ V+ S ++L ++ ++ + + Sbjct: 306 AGTIVKELDFYSTRLWDSVKNRESARWVLELVDGRTISVAYQAMENGGWVGTHEDITEQR 365 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 R A D LT L N A Q+ + L ID ++ YG Sbjct: 366 KSEARIQYLAQHDSLTGLFNRVAFNDHVRKVWQKAAAQKHPFTILSLDIDRFSEINDTYG 425 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ--- 425 +R R L + +L G E ++V S E R + + + Sbjct: 426 HSTGDAFLREAARRLQAACGSA-FIARLGGDEFMIVSSEGEQPARAGDICTRVLTAFEMM 484 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + + G + + E ++ L+ ++ ++ E + Q Sbjct: 485 FNIDGHAIHSGCTVGVSIYPQDGEDIETLISNAGVALYRAKKEERG-SIRFFEPEMDRQL 543 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIA 543 ++ ++L+ + L+ L L+ QP + +G G++ ++ + G++ P F+PL Sbjct: 544 REKRVMLHDLDLVLENKQLELHFQPQADPDGTPFGFEALVRWRHPEKGLVPPGVFVPLAE 603 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 + D +L + A+ P K ++N+ P++ ++ G I + ++ Sbjct: 604 ETGAIVAIDEWILRKACQEAASWP---KPLSIAINVSPMSFQHNDLPGLIHSILLETGLN 660 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + +EITE + + + ++ G R+A+DDFGTGY++ L+ D IKID Sbjct: 661 PKRLEIEITEGVLVQDFSRACSILRRIKNLGVRVAMDDFGTGYSSLSYLQSFPFDKIKID 720 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV I N + I+R+I L +A +L V+AE VET+ Q+ L G +QGYLIGR Sbjct: 721 QAFVAQINKNVQSSAIIRAIISLGEALNLGVIAEGVETELQRDFLADAGCFEMQGYLIGR 780 Query: 724 PQPLA 728 PQP+A Sbjct: 781 PQPIA 785 >UniRef50_A1WC44 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A1WC44_ACISJ Length = 737 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 108/548 (19%), Positives = 201/548 (36%), Gaps = 24/548 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP-VFFIIFTLGVGKLRYPF 262 E+R + + + + +V + + P Sbjct: 180 ERAVRQSEERMRKFAIATEEGLAFHRDGRILDANEALQRMVGYSLAELVGQSIFDFALPE 239 Query: 263 LNLTWA--VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSEWLN 319 Y + + + + +VR + Sbjct: 240 YRALAVEYTRRGSEKPYELAMRHKDGRVIPIEVVGKTMPQQEGDYRVVVVRDITARKQAQ 299 Query: 320 RRW----HLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHY 367 + L D LT LPN R L A E++ + + +D+ + ++ Sbjct: 300 EQAQVQARFLVLHDTLTQLPNRRHLMMQLARMASAAQERQTRAAVLFIDLDHFKTVNELL 359 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 G + + R L ++ + + ++ G + +++L + + L +R Sbjct: 360 GNQAGDQLLIEMARRLQDGVKATDFVARVGGDQFIVLLPDLANRAAAAEVADALLARVRA 419 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + T L + F + + LL + + + E + GQ Sbjct: 420 EFAIGGTPLSLSPSIGISVFPDDGYSPDELLRRADAAMHHTKESGRGTRM-FYEPGMEGQ 478 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 T+ + + +R A+ QG L+ QP + G++ ++ G++ PD+F+PL Sbjct: 479 PTELLQQEHLLREAVFQGAFALHYQPQVRVADGRLVGFEALVRWRHPVRGLVGPDEFIPL 538 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 L VL + L + +VNL + Q+++ G I ++ + Sbjct: 539 AESRGLITPIGRWVLREACRQLKAWHDEGLPRVPVAVNLSAIEFRQRDVVGEIAQVLQSA 598 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 ++PQ + +EITE A+ + ++ L G + +DDFGTGY++ LKR D I Sbjct: 599 GLAPQYLEVEITESALMQQADHTRTTLQALQALGVAVTVDDFGTGYSSLAYLKRYPLDKI 658 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 K+D FV D ++ D IV +I LA + L VAE VET +Q ALL +LG + QG+ Sbjct: 659 KVDRSFVTDTPADSEDVAIVTAIIQLAHSLQLQPVAEGVETAEQLALLQRLGCELAQGFG 718 Query: 721 IGRPQPLA 728 I P Sbjct: 719 IAPPMDAQ 726 >UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8I8_9ALTE Length = 1020 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 107/469 (22%), Positives = 193/469 (41%), Gaps = 26/469 (5%) Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 L+ Y+ + + S + + + R H A D LT L N Sbjct: 549 LRKDGEAYAEWLTITAICGKSGVVQNYVGTFHDITKRKKAEREAHRLAFYDSLTGLANKA 608 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 LE+ Q + + ++ L ++ G +++I L +++E+ Sbjct: 609 LLEERLSEVCKANTRQNTHAALLYVDVEQLRSVNDARGYEFGDLVLKAIAEQLGTMVRES 668 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQH-----MVNILNS---RQIHWNNTGLDMGYGAAWG 442 + L ++ G E ++LS + + + + R I + + Sbjct: 669 DTLARIGGDEFAILLSNLNPSQDVAARVTEGVADKVLDAFTRPIEVLQQKIQVNISIGIT 728 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLA---LDSREEMVSGQTTKQVLLLNTIRTAL 499 DG + L + +Q+ + + + + Q + VL+ +R AL Sbjct: 729 LIDGRSSPVDQQLQRAEQATQQAKEQAKLRGEKRISFFDPEIQAQVVQHVLMEEELRNAL 788 Query: 500 DQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + L+LY QP + GY+ +L GI++P F+P+ Q L ++E Sbjct: 789 AEEQLVLYYQPQIRNPNQLLGYEVLLRWRHPKRGIVSPAVFIPIAEQSRLILPIGRWIIE 848 Query: 558 SLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + LA + +VN+ + N ++ ++ ++ P+ + LE+TE Sbjct: 849 QACEKLAAWQSEPTTSELSLAVNVSIIQFQSNNFVEQVGQILEKTGAPPRLLKLEVTESL 908 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 ++ E + +L G R ++DDFGTGY++ L +L D IKID F+ ++ N Sbjct: 909 LMNDPERITEMMNRLRSMGVRFSLDDFGTGYSSMSYLNQLPLDQIKIDQSFINEVANNLA 968 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 + IV SI LAK +L V+AE VET++Q+ L G Q QGYL GRP Sbjct: 969 SSAIVESIIGLAKGLNLEVIAEGVETEEQRNWLANHGCQNFQGYLFGRP 1017 >UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30T73_SULDN Length = 707 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 105/464 (22%), Positives = 191/464 (41%), Gaps = 20/464 (4%) Query: 284 GVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + Y++ + + + V + M R ++ + H A D LT LPN + Sbjct: 240 KDGSLYAIEQTIICVRDKNQDIVNYIGMSRDITEAKNKEEKIHQLAFYDFLTKLPNAKLF 299 Query: 341 EQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 +Q E + L +DN ++++ G + + I L ++ ++ Sbjct: 300 QQEVEAYIKSTHYNNETFAILFLDLDNFKWVNDSLGHQIGDLLLIEIAAKLKEIISQDSI 359 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E +++ E + + N + I N +++ + + N E Sbjct: 360 ISRLGGDEFVILAP-YENLLTISQLANTILCSVKDPIKVQNREVNVSWSIGISLYPQNGE 418 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 LL +S +M++ ++ L +R A+ L Q Sbjct: 419 NYNDLLKNADAAMYESKNRGKN-TFRYFNDMMNQDAMYRLELDTKLRYAITNNSFFLNYQ 477 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT- 565 P + + G + ++ + D G + PDKF+P+ + + V++ L L Sbjct: 478 PKYSFEHGKTIGVEALIRWIDKDLGFIAPDKFIPIAEESSYINEIGSWVMKQALNDLKII 537 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + S+N+ L ++ L K I P V EITE N + + Sbjct: 538 NSKLSSPISISINVSGKQLEHESFYDEARTLLKESGIEPSLVEFEITETSIMQNIDHVVD 597 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++++ G +I+IDDFGTGY++ LK+L D +KID F+K++ + IV +I Sbjct: 598 ILKKIKMLGVKISIDDFGTGYSSMSYLKKLPIDTLKIDREFIKELEIDEDSKSIVNAIIA 657 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LAK+ L+ VAE VE ++Q+ +L L QGYL RP L D Sbjct: 658 LAKSFKLTTVAEGVENEEQKLILDGLNCDMTQGYLYSRPLSLDD 701 >UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21G77_SACD2 Length = 878 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 105/554 (18%), Positives = 207/554 (37%), Gaps = 29/554 (5%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGK- 257 A + +R L+ LA + +L + IAG + + L Sbjct: 305 RAQHEDEVERFRILADLAPVGILQANSDWSGIYANDRWCEIAGRSMSDILELGWLSAIHP 364 Query: 258 --LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIY 312 L A+S FL+ + + IS + + + Sbjct: 365 DHFHNVIEPLRTAISEGKEFKRECLFLKPNSEQTWVELHARPQISTNGDITGFIATILDS 424 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-------KSFCCLRIDNLEFMSR 365 + A DPLT L N + E + CL +D + ++ Sbjct: 425 TFRHEAEDKLRELAEHDPLTGLANRAMFQHRLEHGLSRTHRHGSLALLCLDLDGFKNVND 484 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + + + L ++E + + ++ G E +++L G + + + Sbjct: 485 TLGHDSGDELLIEVAKRLTKCVREEDTVARVGGDEFMILLEGLKDAQIAAEVSEKILNSL 544 Query: 423 SRQIHWNNTGLDMGYGAAWGRFD-GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 N + + G++ + L+ Q ++ + Sbjct: 545 EPPCSINRQEVFISTSIGITFATKGDKNDSKSLMKQADMALYRAKHEGRN-NYQYYSPDL 603 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQ---PIRNKEGEGYDEILARLKYDGGIMTPDKF 538 + +++ L N++ AL + + ++ Q + + G++ +L G + PD+F Sbjct: 604 ERASQERLYLGNSLHHALQRTEFQVFYQFKSSLSTHKVTGFEAVLRWEHPRRGQLQPDQF 663 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIR 595 +P++ + L + + A + +VN+ P L + Sbjct: 664 IPILDESGLIVPVSRWLTHTSFMQHAKWKAKGLIEKDAKIAVNVSPRLLRDPYFIRGLAN 723 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + I P +VI+EITE ++E + + L + G I++DDFGTG+++ LKR Sbjct: 724 SIQDSKIDPTSVIIEITETALLEHSEQTTDALNGLKRIGVAISLDDFGTGFSSLTHLKRY 783 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IKID FV++++ ++ D IV+++ LAK+ L+VVAE VE + L L Sbjct: 784 PIDQIKIDRSFVQNLLKDSGDKAIVKAVIVLAKSLKLTVVAEGVEDKATLDYLASLNCDE 843 Query: 716 LQGYLIGRPQPLAD 729 QG+ + +PQP + Sbjct: 844 YQGFYLNKPQPAEE 857 >UniRef50_B9ZLS8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLS8_9GAMM Length = 1301 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 101/472 (21%), Positives = 184/472 (38%), Gaps = 22/472 (4%) Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 N+ + ++ ++ ++ + A D LT LPN Sbjct: 817 NRRYTGETHPQWLSLDVVRDEGGEPQYYAGVLTDLSALKRSQNELEYLAQHDSLTDLPNR 876 Query: 338 --------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 RALE+A + G + CL +D + ++ G + + + R L +++ Sbjct: 877 SQLQTLLGRALERARAERRGLAVLCLDLDRFKTLNDSLGHSVGDRVLLEVARRLADVLES 936 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWN-NTGLDMGYGAAWGRFD 445 + L +L G E L VL +T + L R + + + RF Sbjct: 937 PDLLGRLGGDEFLAVLESADTHELAEERARALLEVLQRPFVLDDGQVVYVNASIGVSRFP 996 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL--DQGD 503 + +T+ L+ + A E ++ +++ L N +R AL + + Sbjct: 997 ADGDTVVDLIQHADAAMYHAKALGR-ETWSFYTEDLTQAAAERLDLENRLRHALNQENDE 1055 Query: 504 LLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L ++ QP + G + ++ G + PD+F+P+ + L VL Sbjct: 1056 LAVHFQPQVRLVDGRFTGVEALVRWRTGSGESIRPDRFIPIAEETGLVVPLGEWVLREAC 1115 Query: 561 KWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + SVNL P+ L + N+ ++ + + + EITE Sbjct: 1116 RQGRELLDQVSPDLVMSVNLSPVQLRRGNLVEQVRAILGETGFPARQLEFEITETGLMQQ 1175 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD---IVTNTLD 676 + ++ ++ L G R+AIDDFGTGY++ L+ D++KID FV + D Sbjct: 1176 GDQAVTRLKALKSLGVRVAIDDFGTGYSSLAVLQTFPLDVLKIDRSFVDGVDRMDEEGTD 1235 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I +I +A+ L V+AE VE + Q L + G ++ QGYL P Sbjct: 1236 RLIASTIIAMARNLQLEVIAEGVENEAQARFLIEHGCEFGQGYLYSPALPPE 1287 >UniRef50_Q1YK72 Putative sensory protein, diguanylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YK72_MOBAS Length = 632 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 109/596 (18%), Positives = 209/596 (35%), Gaps = 24/596 (4%) Query: 150 PLKISTFFGDADAIFTVVDLL-SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 P + + T++ L+ S+ A + + FYY + A+ + + Sbjct: 5 PTERAVIAPSMLRFTTILALIVSVLVAFVPPALHFYYGLQYAEGSLAAEARLNSRLVSQI 64 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 + ++ + V I + + Sbjct: 65 VGRNPQMWQFETLRIDEIIAFTDATVTKTLLNAEGGEVSRIGAAALPWPTVSTTHPVYDS 124 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + Q+ + +L F++ + V R A Sbjct: 125 GAVAGRIVITQSLF-ALARTSALLFLVCAAGALGVFFALRTLPLRLLRRAADRASFLASH 183 Query: 329 DPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN + Q+ + CL +D+ + ++ G +R + Sbjct: 184 DPLTQLPNRSLFNEWLVRSVADVDRQDGSMAVLCLDLDHFKEVNDLLGHAAGDELLRQVT 243 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 + ++ + L +L G E ++ + L S+ + +G Sbjct: 244 ERMTATLRRYDILARLGGDEFAIIQKHFAQPAGSARLAERLIEELSKPFDLKGNEVLIGV 303 Query: 438 GAAWGR--FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + Q LL Q ++ E+ ++ + + + + Sbjct: 304 SIGVALRRDPED-RDGQDLLRQADMAMYRAKGEGRG-TFRYFEDAMNDRLVARKKVELAL 361 Query: 496 RTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ + +L L+ QP + + +G + ++ + + GI+ P+ F+ L + L Sbjct: 362 RHAIARNELQLHYQPQIDMKTNSVKGVEALIRWYRGEDGIVQPNDFIQLAEETGLIIPIG 421 Query: 553 LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 V+ + F+VN+ P+ N+ + + P + +EIT Sbjct: 422 EWVIREACRQAGDW----PELTFAVNVSPVQFRHGNLVETVRSALAEAGVEPHRLEIEIT 477 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E S+ + ++ + L G RIA+DDFGTGY++ L+R D IKID F D+ T Sbjct: 478 ENVLLSHTDETIETLRALQAMGVRIAMDDFGTGYSSLSYLRRFPFDKIKIDRSFTSDLGT 537 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV ++ +L A + AE VET +Q LL G +QG+L RP P A Sbjct: 538 CFDADSIVAAVINLGAAMGMVSNAEGVETLEQAELLRAQGCNEVQGFLYSRPVPSA 593 >UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Methylobacterium RepID=B1ZGT4_METPB Length = 574 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 99/452 (21%), Positives = 165/452 (36%), Gaps = 26/452 (5%) Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 A+ S A +PLT L N L Sbjct: 113 AALAPLSSGGFALTFEDVTELLRGAA----LARQEPLTGLCNRVGLHDRLDAALAEAART 168 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL- 405 +A + L +D + ++ G + +R + L + + + +L G E ++ Sbjct: 169 DAPLAVLMLDLDRFKAVNDTLGHPVGDALLRKVAERLRKATRSGDVVARLGGDEFAIIQG 228 Query: 406 ---SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 SG E + + L R + L++G + LL Sbjct: 229 GPSSGAEQPQAAEALARRLVDLVGRTYVVDGHMLNVGVSVGVALSPADGRNADDLLKHAD 288 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 ++ A E ++ Q + L +R AL L QP + Sbjct: 289 LALYRAKAEGRG-THRFFEPAMNAQMQARRSLEIDLRRALALKQFDLAFQPQIQLETGQI 347 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G++ +L + G ++P F+PL + L L + + A + Sbjct: 348 VGFEALLRWNHPERGPVSPALFIPLAEEIGLIVGIGEWALRTACREAAGWTQ---PASIA 404 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL P+ + ++ + + + P + LEITE N +S + + L G + Sbjct: 405 VNLSPVQFRGGRLVETVMHVLAQTGLDPARLELEITEGALLENTDSVLDVLNGLRALGVK 464 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I++DDFGTGY++ L++ D IKID FV+ + N IVR+I L + + A Sbjct: 465 ISMDDFGTGYSSLSYLQKFPFDKIKIDQSFVRGMEGNAECGAIVRAIARLGASLGMRTTA 524 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET Q + G +QGYL GRP P A Sbjct: 525 EGVETATQLDAIRAEGCTEVQGYLTGRPMPAA 556 >UniRef50_A6W0I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0I4_MARMS Length = 806 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 102/477 (21%), Positives = 189/477 (39%), Gaps = 29/477 (6%) Query: 279 QNFLQGVETEYSLAFILAVLISFS-VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + + E + LA L ++R + R H A D +T LPN Sbjct: 317 ETIYRMQGIELPVEIRLAKYKVQDKTETLLLIRDVSERKETEARIHHLAYYDSVTNLPNR 376 Query: 338 RALEQAP----------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 + L + + + +D + ++ G + + + L L Sbjct: 377 QYLADKLYKAIKTKQKNTTSSYSAVVFMDLDRFKTINDSLGHNVGDQLLCCVATQLSSLT 436 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHW----------NNTGLDMGY 437 +EN ++ G E +L+ + + + +N + + + Sbjct: 437 EENIVFARMGGDEFAFLLTHVGDDK--EKVEKAINGFVESVMYACQQVKKAGHHEVHITA 494 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 FDGN+ + + +L Q ++ + + + ++ + + Sbjct: 495 SLGATIFDGNEGSAEAILKQADTALYRAKESGRN-TFALYKPEMQAVSDARLEMEKALHH 553 Query: 498 ALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 A + LY QP N E G + ++ G ++P +F+P+ + L V Sbjct: 554 ATEFKLFELYYQPQTNDKNELIGAEALIRWKDEKKGFISPAEFIPVAEEIGLIVEIGHWV 613 Query: 556 LESLLKWLATHPCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 L L +AT + R S+N+ P+ Q + +++ + P V LEIT Sbjct: 614 LNEALSQVATWLKEGKWQLSWRMSINVSPIQFQQAGFLPMLKTQLEKHDVPPSCVDLEIT 673 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E ++ S + + + G ++IDDFGTGY++ + LK L D +KID FV+D++T Sbjct: 674 ENMLLNDLSSCLKKMNAIKALGVHLSIDDFGTGYSSLKYLKSLPIDRLKIDQSFVRDLLT 733 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D IV ++ +AKA ++SV+AE VET L ++ Y QGY G P P + Sbjct: 734 DKSDEAIVHAVIAMAKALNISVLAEGVETLLHYNRLREIDCFYYQGYYFGHPVPPNE 790 >UniRef50_A3YAL9 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YAL9_9GAMM Length = 1003 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 85/460 (18%), Positives = 180/460 (39%), Gaps = 35/460 (7%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQE------- 347 + +Y+++ ++ + + + D LT LPN + ++QA Q Sbjct: 528 INYVYIIKDISLTKQNEQLINQLSYYDSLTCLPNRKMISEKVEQLIKQAQHQSLTVNTSG 587 Query: 348 -----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + +D+ + ++ G + ++ + L+ ++ + + + G E + Sbjct: 588 HYLPLIRHALLFIDLDHFKNINDSKGYSVGDKLLQEVAHRLIDTVRSTDIVARFGGDEFI 647 Query: 403 LVLSGPETEGRLQH----------MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L+L G + ++N ++ N + D + + + Sbjct: 648 LLLEGVDVSLDAGRALYRAKKVSCLINDALAQVFEINGEHFYISSSVGITEIDESVDEVF 707 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 ++ + + + ++V L +R AL + + LLY QP Sbjct: 708 DAFKHAELAMYEAKSSGRNR-YCFYSPQMQEKILERVNLETAMRKALIKDEFLLYYQPQF 766 Query: 513 N--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD- 569 + G + ++ D GI++P +F+PL L V+ LA D Sbjct: 767 DDLGVLRGVEALIRWHHPDKGIISPMQFIPLAEDSKLIIPIGEWVVREACNTLARWRDDP 826 Query: 570 -KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + SVN+ + Q + + + S + + E+TE + + + ++ Sbjct: 827 LLSQVKVSVNVSVIQFAQDDFVDLVRLILVETGASAKLLQFELTESMLIDDKANILAKMQ 886 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L G +++DDFGTGY++ L++L D +KID FV+++ + +IT + Sbjct: 887 GLKALGVLLSLDDFGTGYSSLSYLQQLPFDQLKIDQSFVRNLNGQGDQHPLALTITTMGH 946 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L V+AE +E ++ L G QGY +G P PL+ Sbjct: 947 SLGLEVIAEGIEEKESLLKLQSFGCNLFQGYFMGHPMPLS 986 >UniRef50_B4VXK2 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VXK2_9CYAN Length = 884 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 91/509 (17%), Positives = 189/509 (37%), Gaps = 31/509 (6%) Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 ++ L + +PFL ++ L + + E +L + C Sbjct: 338 EAMRLLPELLDSEAEHPFLAEMPSMIRLMQQQSSLRREVKIG-EIVYEQVLHYVPE-IEC 395 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------------- 349 + + A D LT L N +Q Sbjct: 396 IRIYALDITDRKRAEELLLFNAFYDRLTGLANRALFMDRLQQAGRRAQPSQGENRDSPSY 455 Query: 350 -KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L ++ + ++ G + ++ + L ++ + + +L G E ++L G Sbjct: 456 RFAVVLLNLNRFKVVNESLGNHLGDQVLQEFGQRLQNCLRPTDTVARLGGDEFAILLEGI 515 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR---FDGNQETLQPLLGQLSWLA 462 + + + + + + M D + + +L + Sbjct: 516 QGVCDAIQVADAIEQTLTLPFNLEGRDVFMTTSIGIALNTNRDRQVLSAENILRNANTAM 575 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 ++ + + + T ++ L +R A+++ + ++ QPI + + G+ Sbjct: 576 HRARSQGKP-GYAIFDNQMLSPTVDRLQLETDMRRAIERQEFQVHYQPIVSLLTHQITGF 634 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFS 576 + +L G++ P +F+P+ + L +L + L+ + + Sbjct: 635 EALLRWQHPQRGLVFPAEFIPIAEETGLIIPMGWWILREACRQLSIWQQQFQSPQPLTMN 694 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q ++ +I ++ + +I+ ++ LEITE N E + +L K Sbjct: 695 VNLSCKQFTQPDLLAQIDQILEETNIAVGSLKLEITESVVIDNPELVKDLLLELKKRQIH 754 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 + IDDFGTGY++ RL +KID F+ I ++ IV++I LA+ S+ VVA Sbjct: 755 LCIDDFGTGYSSLSRLHNFPISTLKIDRSFISRIGALGENSEIVQAIITLARTMSMDVVA 814 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 E +E +Q + L L Y QG+L +P Sbjct: 815 EGIELLEQVSPLVALQCHYGQGFLFSKPV 843 >UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=10 Tax=Bradyrhizobiaceae RepID=Q07VI3_RHOP5 Length = 750 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 100/469 (21%), Positives = 177/469 (37%), Gaps = 19/469 (4%) Query: 276 NYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 ++ T LA L + L + + R D LT L Sbjct: 262 ARTWKHVRADGTLIDLAVYSRQLTYAGQPAALLALMDITERKRAEMRLAFMTQHDSLTGL 321 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN +L + + L IDN + ++ G + +RSI R L Sbjct: 322 PNRNSLRKKLDQMLVSSRRSTEKIALHFLGIDNFKAVNDSLGHAVGDKLLRSISRRLRST 381 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 ++E + + +L E ++ SG + + + L L + Sbjct: 382 LREEDVIGRLNSDEFAILQSGVQNPEDVVLLAKRLLHAIGEPFILEGHSLVVSASMGIAM 441 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + + L ++ + E + + + + +R A+ Sbjct: 442 VPTDGDDSEKLFMSADMALSKAKNEARG-SYSFFEPGMDARAQTRRKIEFELRQAIQHDV 500 Query: 504 LLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L + QP+ + G + ++ + G+++P +F+P+ + L QVL Sbjct: 501 LRPHYQPLIGLNSGRITGCEALVRWPHPERGLVSPAEFIPVAEETGLINPLGTQVLRRAC 560 Query: 561 KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 A P R ++NL PL N+ ++ K+ +SP+ + LEITE + Sbjct: 561 LDAAAWPD---DVRIAINLSPLQFRVGNLLSVVMDALKQSGLSPKRLELEITETLLLEKS 617 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + + L G RI++DDFGTGY++ L+ D IKID FV+ + N IV Sbjct: 618 SQVIATLHALRALGARISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRGVCDNRELQAIV 677 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 RSI L +++ AE VET+ + L G QG+L +P A+ Sbjct: 678 RSIISLGMGLGVTITAEGVETEAELNWLRAEGCHEAQGFLFSPARPDAE 726 >UniRef50_Q3A254 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A254_PELCD Length = 874 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 90/445 (20%), Positives = 177/445 (39%), Gaps = 23/445 (5%) Query: 303 VCLLYMVRIYHRSEWL-------NRRWHLQALTDPLTLLPNF--------RALEQAPEQE 347 V +VR + R + A D LT LPN + +A +++ Sbjct: 406 VLFFVLVRDITERKAADTMLRKQKARLNYLAYHDVLTGLPNRLKAIELLQTYIGRANQRD 465 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + +D + ++ G + + R + ++++ + + + G E L++L Sbjct: 466 TMVAVLIFDLDRFKNLNESLGHETGDEILMEVARRIQEMLRDTDVVARFGGDEFLVLLEH 525 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ++H+ L ++ + + + + E Q +L Sbjct: 526 VADSTGVKHVAEKLLEAIAQPLRIGEQQFYLTGSIGISLYPKHGENAQTILKAADSAMYF 585 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + ++ + +++ L +R AL+ +L+ QP N + E + Sbjct: 586 AKEQGRN-TYRFFIPSINVEVEERLYLETDLRQALNLEQFMLFYQPEFNLHTGKVECLET 644 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLM 580 +L GI+ P +F+PL L VL+ + + R +VN+ Sbjct: 645 LLRWQHPKRGIVGPGEFIPLAEDTGLIVPIGEWVLQEACRQVIAWREQGLPSIRVAVNIS 704 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 Q + R+ K+Y ++ + + LEITE +AE ++ + L + G +A+D Sbjct: 705 ARQFRQSGFIEMVFRVLKQYGLAAEWLELEITESFVIQSAEHALNMFKVLRQSGISLAVD 764 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFG GY++ L++ +K+D FVK++V + D I +I + + VVAE +E Sbjct: 765 DFGQGYSSLSYLRKFPFTKLKMDRAFVKNVVNDPHDEAIAAAIIAMGDSLGQEVVAEGIE 824 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ 725 T++Q L LG QGY + P Sbjct: 825 TREQLDTLRTLGCPCGQGYYLALPM 849 >UniRef50_Q312J4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q312J4_DESDG Length = 904 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 116/596 (19%), Positives = 220/596 (36%), Gaps = 36/596 (6%) Query: 161 DAIFTVVDLLSLF--TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 ++ + L TA L + ++ R + L R + Sbjct: 302 ADMYALNRQQGLLAVTAFLFFALMALGFLREQRTR----ALRRSAELYRQLADTAYDIEL 357 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFF----IIFTLGVGKLRYPFLNLTWAVSTLCL 274 W A LL + I GY F ++ + + F A L Sbjct: 358 WHDAEGKLLY---VSPSCERITGYPAADFMADAGLLERVVHREDLPAFRMHMSAPGMLEG 414 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQALTDPL 331 + L ++ + + + + VR S+ + + ++ D L Sbjct: 415 ESLEYRLLHRTGKVRWVSVVAREIWTSDGICQGVRSSVRDVTESKLMEKELDYKSQHDEL 474 Query: 332 TLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 T + N + G + L ID + ++ G + + Sbjct: 475 TGVANRSLCLARIRKAMVRTAPRPEVGFAVLFLDIDRFKIINDSLGHEQGDMVLAEMAER 534 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGA 439 L+ ++ + + + G E ++VL M ++ R + + + Sbjct: 535 LVASVRPCDTVARFGGDEFVIVLEELPGPREAVRMARLIKKRFKEPLLLEGHEMRITCSI 594 Query: 440 A-WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + G+ Q + + ++ A L + + L N +R+ Sbjct: 595 GMIFEYGGDSVGAQAAVRNANIAMYRAKAAGRDK-LKVFRPKMLAAAASVMTLENDMRSG 653 Query: 499 LDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L + + + QP++ + G++ ++ + GI+ PD F+PL + L L Sbjct: 654 LQRDEFFMEYQPVQRSDDGTLTGFEALIRWRHPEKGIIGPDHFIPLAEESGLIVDIGLSA 713 Query: 556 LESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 L +A G +VNL Q ++ + + + + P+ + LEIT Sbjct: 714 LRKSCCEMARWCRRYPGCEELFLAVNLSARQFSQPDLVTCVSGILQDSGLDPRQLKLEIT 773 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E SNAE+++ + +L + G ++AIDDFGTGY++ L++L D +K+D +FV + Sbjct: 774 ESTIMSNAETALAMMHRLKQIGVQLAIDDFGTGYSSLAYLQKLPVDTLKVDRMFVSAMEE 833 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IVRSI LA + L+ VAE VE +Q +L LG Y+QG+ +P P+A Sbjct: 834 QAGCLEIVRSIIVLANSLQLNTVAEGVENSRQLEMLRNLGCSYVQGFYFHKPLPVA 889 >UniRef50_A0YGV9 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGV9_9GAMM Length = 760 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 112/480 (23%), Positives = 194/480 (40%), Gaps = 26/480 (5%) Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPL 331 L N + S + L S LL V + ++ QA D + Sbjct: 275 LANTVNSRKRDGGAVSCEWASTPLEDGSGTLLGYTSFVTDISKRLEHEQQITHQAFYDAV 334 Query: 332 TLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN R + QE + + +D+ + ++ G + ++ L Sbjct: 335 TDLPNRRYFYERLRQEMSRVQRGPNHSAVLFIDLDHFKNINDSLGHALGDELLKQFAMRL 394 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPET--------EGRLQHMVNILNSRQIHWNNTGLDM 435 ++++E L +L G E +L+L + G++ + L N + Sbjct: 395 QNRLRQHEVLARLGGDEFVLLLEELDPDLDKSQAIAGQVAKALQTLIQEPFVLENNPYTL 454 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 FD +L Q +S E+ +S Q + ++LLN + Sbjct: 455 TCSIGITLFDKTDFNESEILKQADLALYRSKHRGRN-CYSFFEQEMSEQALRHLILLNNV 513 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ + L QP + E +G + +L + G ++P +F+P++ L Sbjct: 514 REAIGSEEFSLVFQPQVDIHTAELKGAETLLRWNNSELGRVSPAEFIPILESSTLIVEVG 573 Query: 553 LQVLESLLKWLATHPCD---KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL+ + L + R ++N+ P LL + ++ L ++ +SP + Sbjct: 574 HWVLDHSFEQLKEWQLAALWHEPMRLAINISPRQLLDPDFIEQVTALLNKHELSPSLIEF 633 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE + E +++ G +IDDFGTGY++ LK+L D++KID F+ Sbjct: 634 EITENVLVQDVEKVGVILDKFASMGISFSIDDFGTGYSSLSYLKQLPIDVLKIDKSFIDH 693 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D +IVRSI + L+ VAE VET++QQ L +G LQGYL RP + Sbjct: 694 CTSEGNDQVIVRSILSICTELGLTSVAEGVETEEQQKKLQAMGCDLLQGYLYSRPVRADE 753 >UniRef50_C4XMU6 GGDEF domain protein n=2 Tax=Desulfovibrio RepID=C4XMU6_DESMR Length = 601 Score = 576 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 86/464 (18%), Positives = 172/464 (37%), Gaps = 19/464 (4%) Query: 284 GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 ++ A L + + + R + L A D LT L N Sbjct: 121 PSGSQIWRALCFTPLRGPTSGAVATLTDISRQKQLEEHILHDAFHDTLTGLFNRALFINR 180 Query: 344 PEQEAGK---------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 +Q + + L +D + +++ +G + + I L ++E + L Sbjct: 181 LDQAIKRLRRNPDALYAVLYLDMDRFKLVNKTFGHVTGDRLLMVIANRLQKQLRELDTLA 240 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E +++ M + ++ + + E Sbjct: 241 RFGGDEFAILIEDISGLDEASTMAENVLRQLAQPFRLKKQEIFVTCSLGVVVGSAAYEHP 300 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 +L S H + + T +++ + +R A++ G++ ++ QPI Sbjct: 301 DQVLRDADNAMYSSKEHGGDH-YTVFDAGMRVLTQRRMEMELALRQAMESGEITVHYQPI 359 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + G + + G + P +F+P+ + L +L + L Sbjct: 360 VSLATGDVTGLEALARWQHPRQGFIPPSEFIPIAEESGLINELGALILRQSCRRLVELGR 419 Query: 569 D---KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + + SVN+ + + + + I V LE+TE +A+ ++ Sbjct: 420 ENPEGEKLSVSVNISGRQFKRPDFVQEVAGILAETGIDASRVKLELTESVLMDDADEAVR 479 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 I+ L G ++ IDDFGTGY++ ++R D +K+D FV ++ + IVR+I Sbjct: 480 AIKNLKALGVKVVIDDFGTGYSSLSYIQRFPFDSLKVDRSFVGNMNEAEQNMEIVRAIIA 539 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VVAE VE + +A L +L + QG+ R P + Sbjct: 540 MAHKLGLEVVAEGVELAEHKAALSELRCESAQGFFFSRAVPGEE 583 >UniRef50_Q8DHG0 Tlr1999 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DHG0_THEEB Length = 790 Score = 576 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 114/512 (22%), Positives = 206/512 (40%), Gaps = 29/512 (5%) Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 D +A Y V ++ + G+L + L + ++ + T+ ++A + A Sbjct: 277 DLLAHYQVKANLVVPIVVEGRL-WGLLICHQCAHPRNWQDSEIELIKQISTQLAIAILQA 335 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QE 347 L R + + + QA D LT LPN E + Sbjct: 336 EL------YQKAQREIQERKEVEAQLLYQARHDHLTHLPNRWLFEDQVRLSLNHAAAHSD 389 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + CL +D + ++ G + +++ + L + + + +L E ++L+ Sbjct: 390 FHYAVLCLDLDRFKTLNDSLGHAIGDLLLQAFAKRLTRCVSPQDVVARLGSDEFAVLLND 449 Query: 408 PETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + Q + L R ++ L D + ++ + LL Sbjct: 450 IQGIEQAQAIAQRLRERLNHPFEIDHYTLYTTVSIGLVMGDAHYKSTEELLRDADMAMYY 509 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDE 521 + + H +D + M+ Q ++ L +R A+DQGD LY QPI N G++ Sbjct: 510 AKSKGHNR-IDIFDPMMLQQVRDRLHLEVELRQAIDQGDFALYYQPIINLRSQSPRGFEA 568 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-----FS 576 ++ K + +++P F+P+ + L VL S + L R S Sbjct: 569 LVRWQK-EDTLISPTVFIPVAEETGLIFELSRWVLRSACEQLQQWQKRYPKLRSLGFTVS 627 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +NL + I + + +H++ Q + +EITE + +S+ + +L G R Sbjct: 628 INLSANQFSLPTLVAEIEQALEHHHLAGQFLKIEITESTLMHHLDSACEILTKLKAMGVR 687 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I IDDFGTGY++ L+ L D IKID F+ + + D +VR+I LA+ L +A Sbjct: 688 INIDDFGTGYSSLSYLRNLPLDGIKIDRSFISQMDRSQEDLELVRTILVLARNLHLDCIA 747 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E +E+ Q LL L + QGYL P Sbjct: 748 EGIESTTQLQLLRSLRCPFGQGYLFAPPLTAD 779 >UniRef50_B2J1V8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B2J1V8_NOSP7 Length = 720 Score = 576 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 93/437 (21%), Positives = 177/437 (40%), Gaps = 25/437 (5%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMS 364 + +L DPLT LPN L + E + L +D + ++ Sbjct: 267 ERKQAQELIIHNSLHDPLTDLPNRTLLIERLELAINRAKRLETYRYAVLFLDLDRFKVIN 326 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 G + +++I L ++E + + ++ G E +++L + + + Sbjct: 327 DSLGHLAGDQLLKNIAHKLKTHLREVDLVARIGGDEFVILLEDISDIEKAIQITERMLID 386 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + N+ + + LL ++ A + + + Sbjct: 387 FQTPLMLNDAEVVISTSIGIVLGTNEYSQASDLLRDADIAMYKAKAQRRN-SYKIFDVKM 445 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---------KEGEGYDEILARLKYDGGI 532 Q ++ + IR A+++ + ++Y QPI + G++ +L G+ Sbjct: 446 HTQAVNRLTIETDIRKAIEREEFVIYYQPIVDILGDGQSKAGRLIGFEALLRWQHPTRGL 505 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKNI 589 + P +F+ + + L + D +L + LA + ++NL + Q N+ Sbjct: 506 VLPKEFVSIAEETGLIVQIDRWMLYKACQHLADWKVKFATHFPIKVNINLSVQDIRQGNL 565 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I ++ + + + LEITE N ++ + QL +I+IDDFGTGY++ Sbjct: 566 IEYIDQILAQIGLEGDCITLEITESMLIENISQTIDLLSQLKSRKIKISIDDFGTGYSSL 625 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L RL AD +KID FV + + +V +I L+ L+VVAE +ET QQ L Sbjct: 626 NYLHRLPADNLKIDRSFVSQMQQGNRNYQVVSTIIALSNQLGLAVVAEGIETPQQLQWLQ 685 Query: 710 KLGVQYLQGYLIGRPQP 726 +LG ++ QGYL +P Sbjct: 686 ELGCEFGQGYLFSKPLS 702 >UniRef50_B1XWM7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWM7_LEPCP Length = 751 Score = 576 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 94/458 (20%), Positives = 171/458 (37%), Gaps = 17/458 (3%) Query: 282 LQGVETEYSLAFILAV-LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 L G + L A + + + + +A D LT LPN L Sbjct: 251 LSGDRLDRPLRRAPADHDRDRVTGAVLALSDVTEALRAADKLQHEATHDALTGLPNRALL 310 Query: 341 EQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + + +D + ++ G ++ + L + ++ Sbjct: 311 SDRLQHAVLGAQAGQRSVAVLFIDLDRFKRINDSLGHRHGDAVLKEVASRLQQCCRAHDT 370 Query: 393 LYQLPGSELLLVLSGPET-EGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQE 449 L + G E +++L + + +++S + + + G + Sbjct: 371 LARWGGDEFVVLLEDVPSRDAVAARAAQMIDSVTLEFAIDQVEVACGCSIGIAMAPQDGV 430 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL + + + + T + + L +R L+ +L+ Q Sbjct: 431 AVDALLAMADTAMYRGKSRGGKR-FEFYASEMPSWTREWLALETRLRHGLETQSFVLHYQ 489 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P N + G + +L + DG + P +FLP+ + L V+ + LA Sbjct: 490 PQVNLKTGQLVGLEALLRWRQPDGELWLPGRFLPVTEETGLILPIGEWVIREATQQLARW 549 Query: 567 PCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 SVN+ L + + + I + LE+TE A ++ Sbjct: 550 RDQGLPLVPVSVNVSTRQCLDRRLVQVVAEALLCSGIDAGLLKLEVTESTAMADLGHLRG 609 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L G ++A+DDFGTG+++ LK Q D IKID FV+DI + A IVR+ Sbjct: 610 LLVELRALGVQVAMDDFGTGFSSLSHLKHFQIDQIKIDPSFVRDISRDANGAAIVRATIA 669 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 LA L VVAE VE+++Q A L QG+L R Sbjct: 670 LAHGLGLPVVAEGVESEEQMAFLSAHHCDIAQGFLYAR 707 >UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=cellular organisms RepID=A9BW89_DELAS Length = 947 Score = 576 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 99/430 (23%), Positives = 173/430 (40%), Gaps = 15/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRAL----EQAP----EQEAGKSFCCLRIDNLEFMSR 365 E RR A D LT LPN L EQA + + + +D + ++ Sbjct: 493 EREQARRRIRQLAFYDGLTTLPNRSLLLAQAEQALSVASHEGHELAVVFIDLDRFKQVND 552 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM--VNILNS 423 G + S+ + + ++ + +L G E ++VL + + + Sbjct: 553 SLGHPAGDRLLCSVAQRIQAELRTGDIAGRLSGDEFVIVLPHCGGAQAAEVIERLQSALG 612 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 ++ L F + ++ LL + Q+ + L ++ Sbjct: 613 EPCMIDDVSLASTASCGIAVFPADGRDMETLLHRADMAMYQAKSGGRGL-YSFFSPEMNR 671 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 ++++L +R AL G L L+ QP + G + + + G ++P +F+P Sbjct: 672 LAQERLVLETALRDALRSGGLRLHYQPQLDLKDGRLYGVEALARWSHAEFGEISPARFIP 731 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L L + L SVNL P + ++ I + Sbjct: 732 LAEECGLIGELGTWALREACRQLGEWRSRGIDVPAMSVNLSPTSFHNLDLPRMIADTLEH 791 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + PQ + LEITE +M ++ +H G R+++DDFGTGY++ L+RL Sbjct: 792 NALKPQDLTLEITESLLLDTNPGTMRTLQAVHSQGVRLSMDDFGTGYSSLSYLRRLPVSE 851 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +K+D FV D+ + + +I + ++ L+VVAE VET Q +L + G QGY Sbjct: 852 LKLDRSFVADLENDEAAQALSNAILGIGRSLHLTVVAEGVETAAQNTILREQGYPVAQGY 911 Query: 720 LIGRPQPLAD 729 L RP P AD Sbjct: 912 LFSRPLPAAD 921 >UniRef50_A3QBK2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella loihica PV-4 RepID=A3QBK2_SHELP Length = 816 Score = 576 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 94/510 (18%), Positives = 192/510 (37%), Gaps = 19/510 (3%) Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 D I ++ V + + P + + N T + + A Sbjct: 302 DAIGLHIEQVMDLCDAKTKYRSPNPVTIAIKEKRNVA-MALNCQLNSLDGTTFQIEDSAA 360 Query: 297 VLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------ 347 + + + + S ++ + A D LT LPN L Sbjct: 361 PITDSEGKVTGGIIVFHDCSESVAMSLKMSHLANHDQLTDLPNRILLHDRINHACAVADS 420 Query: 348 --AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + ID+ ++++ G I+ + + L L+ N L ++ G E +L+L Sbjct: 421 YDKSVALMLIDIDHFKYLNDSLGHSYGDQVIKQVAKRLQSLIDPNATLGRIGGDEFVLLL 480 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 ++ + + + + + + + + L+ + Sbjct: 481 PSLTATSQVDSIATDIVRSLNTPFRIDGQEYTLSVSVGISIYPSDALRAEELMTHVDAAM 540 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 ++ E + + TK+ L+ +RTA+D + +Y QP + E G Sbjct: 541 YRAKDLGRNR-FCYFSEDLEQELTKRHELVTLLRTAIDTEAIEVYYQPKVDLKTKEIIGA 599 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + + G +++P F+PL + L + +L+ + + +VN+ Sbjct: 600 EALARLYDPSGKLISPLDFIPLAEETGLIHQLGEIILKQSCMAAKAWQKRGRPLQIAVNI 659 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + ++ + + + LE+TE + + ++ + L G IAI Sbjct: 660 AAKQFTNPEFCDSVAKVLELTGLDSSFLELEVTESSLMYDFDEALNVLNTLSSLGLSIAI 719 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK + +KID FVKD++ + IV+++ LAK+ L ++AE + Sbjct: 720 DDFGTGYSSLSYLKFFPVNTLKIDQSFVKDMLGDEQSLDIVKAVIHLAKSLKLKLIAEGI 779 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E +Q L L + QGY+ +P PL + Sbjct: 780 EDAEQLQKLVALECEQGQGYMFSKPLPLKE 809 >UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AF7_DECAR Length = 1094 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 98/485 (20%), Positives = 169/485 (34%), Gaps = 21/485 (4%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRW 322 L W+ E L + L MV I + + Sbjct: 597 LRACWSFPIADSGGKVLGVFGIYRREPGLPSEAELESIRQAHHLAMVAI--ERNRIEAKL 654 Query: 323 HLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 QA D LT LPN G + + +D + ++ G Sbjct: 655 KYQASFDALTGLPNRSLFYIRLRDEMLRAARTGHGGALLFIDLDRFKEVNDSLGHESGDS 714 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNT 431 + + ++ ++ + +L G E ++VL L + + + Sbjct: 715 LLVEAAERIRAQVRASDLVARLGGDEFVVVLPDVRAPEHLGLLAQAIVDALVVPFVLDGH 774 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + + E LL + E + ++ L Sbjct: 775 QAYVSASVGIACYPQDAEDADILLSCADKAMYVAKELGRN-GFCFFTESMQTSADYRLKL 833 Query: 492 LNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 + +R+AL G LLL+ QPI + + +L G++ PD+F+ L + L Sbjct: 834 SHDLRSALADGQLLLHYQPIVEVESGRVVKAEALLRWRHPQRGMVPPDQFIHLAEETGLI 893 Query: 549 ARFDLQVLESLLKWLATHPCDKK----GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 V + + SVN+ P ++ + K + P Sbjct: 894 HAIGDWVFQQAALTARDWAARMPAGAADCQISVNMSPRQFVKDGSEAGWLDYLKSIGLDP 953 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LEITE + G +I++DDFGTGY+ LK+ D +KID Sbjct: 954 RYIGLEITEGLLLDERLHVAERLAAFRASGIQISLDDFGTGYSAMAYLKKYPIDYLKIDR 1013 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+D+V+++ D I +++ +A L VAE VET +Q+ LL G +QGY RP Sbjct: 1014 TFVRDLVSDSGDRAIAQAMIFMASQLGLKTVAEGVETAEQRDLLQSFGCDLIQGYYYARP 1073 Query: 725 QPLAD 729 P + Sbjct: 1074 LPRDE 1078 >UniRef50_B8CTT8 Sensory box/GGDEF/EAL domain protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTT8_SHEPW Length = 710 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 98/469 (20%), Positives = 190/469 (40%), Gaps = 18/469 (3%) Query: 278 NQNFLQGVETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 +F + + + + + L + + QA D LT LP Sbjct: 207 EDHFWRADGSSFPVEYWSHPMTLNDNKMGAVISFHDNSERLESEALIRHQAHYDALTDLP 266 Query: 336 NFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + EQ + L +D+ + ++ G + + L+ Sbjct: 267 NRFLALRRLEQLVDASARSGKMLAVIFLDLDDFKKINDSLGHEAGDQLLITAADRLMKAT 326 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 ++ + + +L G E +++L G + Q + L + + +N L + + Sbjct: 327 RKEDTVGRLGGDEFIILLDGLSSANDAQPLAENLIGGFRKPFYIDNRQLILTASIGIAIY 386 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + +T LL + + ++ + ++++ + I AL++G+L Sbjct: 387 PNDGKTPSELLRNADSAMYHTKSIGRN-TYSYFTHAMNKEVSRRLAIEEQIHGALERGEL 445 Query: 505 LLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 ++ Q R+ G + +L GI++P +F+P+ Q + +L L+ Sbjct: 446 QVHYQIQLDIRDGSIMGAEALLRWDNPVLGIVSPAEFIPIAEQTGVIEPMGEFILHRALE 505 Query: 562 WLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 T R ++NL P N+ I + + P+ + LEITE S Sbjct: 506 TALTWQQTFNDEFRVAINLSPRQFRNPNLVQLINDCVNQLGMKPKDLELEITEGVLLSGH 565 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 ++ + L K GF I++DDFGTGY++ L+ I+KID F+KD+ T+ ++ Sbjct: 566 AYTLDALMALSKAGFCISMDDFGTGYSSLSYLRTYPFQILKIDRSFIKDMNTDDTSKELI 625 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + ++A A + V+AE VETQ+Q L + Y QG+LI +P L + Sbjct: 626 IATIEMAHALGIRVIAEGVETQEQFDELSFMMCDYAQGFLISKPVVLDE 674 >UniRef50_B9Z647 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z647_9NEIS Length = 1072 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 96/496 (19%), Positives = 201/496 (40%), Gaps = 20/496 (4%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLY 307 F G + + A+ + + + +A + + Sbjct: 546 FLQGRDTAQPELTAIRRALENRHEGKALLRNYRKDGSMFWNELRVAPVRDSQGEVSHYIG 605 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDN 359 ++ ++ QA D LT LPN L+ Q + L +DN Sbjct: 606 VLNDVTEAKRYQEELERQANFDTLTGLPNRNLLQDRLGQGIAVARSKDERFAVALLDLDN 665 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 ++++ G + + + R + + + +L G + +L+L G +T +L + Sbjct: 666 FKYVNDSLGHTLGDALLIEVARRIESSVPALATVSRLGGDDFVLLLPGVKTAEQLDLALK 725 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + ++ + + T L + + + ++ LL Q+ A Sbjct: 726 NVTDQLNQPVELSGTELFLSASIGCCFYPDDGSSVDELLSNADTAMYQAKALGKSQV-RC 784 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIM 533 ++ + ++V L +R A+ Q +L +Y QP + G++ +L + + ++ Sbjct: 785 FALHMNDRVQRRVELEGALRRAIAQDELTMYYQPQLDLQSDRLCGFEALLRWRRGER-LI 843 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGR 592 +P +F+P+ + L D V+ ++ + + + P ++N+ L+L + I Sbjct: 844 SPLEFIPIAEETGLIREIDRYVIRAVFRQVEEWRAEGLDPGEVAINISALSLQEAGIVPY 903 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + P A+ LE+TE N +++ + +L + +IDDFGTGY+ L Sbjct: 904 IAAEMASRRLPPDAIKLEVTESLLMKNVDTAQQVMSELKALHLKWSIDDFGTGYSALSYL 963 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 +R D +KID F+ D+ N +A + R+I +A++ ++V+AE VE ++Q L + G Sbjct: 964 RRYPFDQLKIDKSFIDDVNVNPENASMTRAIISMARSLRIAVIAEGVENREQLGFLVEAG 1023 Query: 713 VQYLQGYLIGRPQPLA 728 +QGY P Sbjct: 1024 CDQIQGYYYSPPLTAE 1039 >UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47U99_COLP3 Length = 1534 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 103/577 (17%), Positives = 206/577 (35%), Gaps = 27/577 (4%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 ++ + R+ S + + T W+ + + + Sbjct: 944 LGKIVAVDANNHPVRVTGSYTNITESRANEERAQYYGDAFQQTQDWVFIIDEKISRITAN 1003 Query: 234 YENDFIAGYLVPVF-----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + + F + + + + + + E Sbjct: 1004 QSMRAVFDWPEEEFDFSDKLLGVSQKRRSFYRKLMLSLKEGE---HWRGEELIVTANKDE 1060 Query: 289 YSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 Y + + V S L+++ + L A D LT LPN L + Sbjct: 1061 YHVIINVTVGFSSVTNALHYLFVLTDISAQKSAESELRLLANYDHLTGLPNRTLLLERIK 1120 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 ++ + + +D + ++ G +R I L ++ ++ + ++ Sbjct: 1121 HAIDFSNRRDTSIAVFFIDLDRFKQVNDSLGHDFGDLLLREITNRLQSTLRIDDTVARIG 1180 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +++L E +L + + + + + + +G + + L Sbjct: 1181 GDEFVVLLESFANENQLGRIAEKVIDTIGQSVDLDGNLVSVGASVGIALYPNDGINSDEL 1240 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 L + ++ + +++ + ++ A+ + + + QPI N Sbjct: 1241 LRHADVAMYHAKQAGK-SNFKFYTAQMNVEAMERLSQESALKLAVKNNEFINHYQPIINA 1299 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + G + ++ G++ P F+PL + NL LE + K L + Sbjct: 1300 YTGKAVGVEMLMRWQTST-GLVPPSDFIPLSEELNLIITMTEMALERVCKDLKEWHTIRP 1358 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 S+NL ++ +I I L RY + + +E+TE E+++ + +L Sbjct: 1359 EFYVSINLSVQHFVEADIVSFISELLARYQLPAAILRVEVTESSLILQPENAITTMRKLS 1418 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G +A+DDFGTG+++ LK+L DIIKID FV I N D IV + LAK + Sbjct: 1419 SLGLTLALDDFGTGFSSLSYLKKLPLDIIKIDRSFVAGIGINEADEAIVDTTLVLAKRLN 1478 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +AE VET +Q L YLQGYL +P Sbjct: 1479 MHCIAEGVETVEQFNYLVAKQCHYLQGYLYSKPSSAE 1515 >UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KCF3_PSEFS Length = 857 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 109/554 (19%), Positives = 199/554 (35%), Gaps = 28/554 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + ++ +R + S LS + +I + + Sbjct: 304 SQNALATSEARFRDVVEASSDWVWEIDAGWRFTYLSERFEGVTGLTRYAWIGATMNDLLE 363 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM 308 L L P +V ++ E + + Sbjct: 364 TESGLLSQWLSAPGRRPDISVQ--------CRYVDAAGQERTTRLSAREMP--CGGFRGT 413 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNF---RALEQ----AP-EQEAGKSFCCLRIDNL 360 RR + D LT LPN +A A E L +D Sbjct: 414 ATDVTEEVEARRRIEFLSQHDALTGLPNRTRLQAFLDGKLKALPSTEQPLVMLSLDLDRF 473 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + L ++ + + ++ G E +L+L+ T+ ++ + Sbjct: 474 KPVNDLLGHAAGDRVLNEVSARLADCVRHGDLVARVGGDEFVLILTDAGTQDEVETLCKR 533 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L R I + + + + LL ++ A Sbjct: 534 LIESIERTIRIDEQEVFISASIGIAIAPNDAREAAELLRYADIALYEAKAAGRN-TWRFY 592 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMT 534 ++ + ++ L + +R A+ +L L+ QP I + + G + ++ G++ Sbjct: 593 SGDMNARIIERRRLESDLRYAIKHAELRLHFQPRYRIADGQMVGAEALVRWQHPVRGLIA 652 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 PD F+P+ + L VLE+ A P SVNL P + N+ R Sbjct: 653 PDTFIPIAEESGLILALSDWVLETACVCAAQWPE---PLFVSVNLSPTEFKRGNLVERTQ 709 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + K I P V LEITE +A ++ + L + G RIA+DDFGTGY++ L+ Sbjct: 710 QALKSSGIDPARVELEITESVMLEDATGALEVMRTLKQLGVRIAMDDFGTGYSSLSYLRD 769 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +KID F+ + + D I+++I L + +L+V AE +ET + ALL + + Sbjct: 770 FPFDGLKIDRSFLTRLEESDDDKAIIQAIVGLGRTLALTVTAEGIETAEHLALLKAVACE 829 Query: 715 YLQGYLIGRPQPLA 728 QGY + RP + Sbjct: 830 EGQGYFLSRPLDIE 843 >UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS52_BACS4 Length = 607 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 104/438 (23%), Positives = 181/438 (41%), Gaps = 15/438 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLR 356 L M R R + + D LT LPN E+ + Sbjct: 154 FLIMHRDVTRLKQAEKVIKELGAVDTLTGLPNRDKFERDVRSRIEMKHAEKFPFAILFFD 213 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D +F + G I+SI +TL + + ++Y+ G E ++ P+++ +Q Sbjct: 214 LDRFKFYNDTLGHFTGDKLIQSISQTLSSIQHKKVQIYRYGGDEFSVLFHSPKSKEEVQE 273 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + H L + F T ++ Q + Sbjct: 274 LAQEILLAFESPFHVKGNELYITASIGISYFPVIGVTYDQIIQQAEMAMHYAKELGKGD- 332 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDG 530 + + + +++L+ +R A++Q + LY P + + G + +L Sbjct: 333 FQWYQSSIRTEHDEKLLMEKRLRIAMEQENFELYYHPQIDLKENKVIGVEALLRWNDEQL 392 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G ++P KF+P+ + L + VLE + R +N+ P + + Sbjct: 393 GKVSPYKFIPIAEETGLINQIGDWVLEKACIQAKKWNNEGHELRIGINISPQQFQRPDFV 452 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ + +SP+ + LEITE N + + + +L +FG I+IDDFGTGY++ Sbjct: 453 SKVKNTLDKTGLSPKLLDLEITENDLLYNRDECLKTLYRLKQFGVSISIDDFGTGYSSLS 512 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+R D +KID F+K++V NT D IV SI LA L V+AE VET + A L+K Sbjct: 513 YLRRFPIDTLKIDQSFIKEVVDNTNDQAIVTSIIQLAHNMKLRVIAEGVETSEMVAFLNK 572 Query: 711 LGVQYLQGYLIGRPQPLA 728 L +QG+L +P P Sbjct: 573 LSCDEMQGFLYSQPLPPE 590 >UniRef50_C7RKP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKP6_9PROT Length = 640 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 116/597 (19%), Positives = 207/597 (34%), Gaps = 38/597 (6%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + L + R A RR A + +AA + Sbjct: 4 SVTFLSAPRVGQAPRLVSRARKTAERRQADQALRRSEA-LKASILASLACGIVAADPQGV 62 Query: 228 LLLCTP-------YENDFIAGYLVPVFFIIFTLGVGKLRYP------------FLNLTWA 268 + C P Y D + G L PV F G P L A Sbjct: 63 ITACNPCAEAILGYRADELIGKLTPVIFRDSGDPAGPNDRPSQPPHRTGDAGLDAQLARA 122 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 S + L+ + ++ + ++ + R + Sbjct: 123 GSGSTAGERDTTCLRKDGQQIAVRLATIPMHDPDGLVSGYVHTLVDITRHKEAEDGIQRL 182 Query: 326 ALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 DPLT L N L+ Q + L +D + ++ G + + Sbjct: 183 VHADPLTGLANRILLDARVRQDLSRAHRAREPLALIFLDVDRFKNVNDTLGHRIGDELLI 242 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN--ILNSRQIHWNNTGLDM 435 + L ++++ + L +L G E +LVL + +G + + L Sbjct: 243 QVAARLDSIVRDEDTLCRLGGDEFVLVLPNTDADGAANVAEKLLKITAPSYRLEQHVLTC 302 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 A + + +++ L ++ A A + + + + N + Sbjct: 303 TVSAGIAMYPTDGDSVASLSTSADAAMYRAKARGGN-AYSFFTAEMQERLARTRQIRNEL 361 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ G+L L QP + G + +L G+++P +F+P+ LS Sbjct: 362 RRAIANGELHLQYQPRFAMAARRPVGAEALLRWQHRQLGMVSPLEFVPIAEGSGLSLALG 421 Query: 553 LQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + ++ + R +VNL Q N++ R+ R+ + P + LE+ Sbjct: 422 EWVLRTAIRHMRGWQNRSLPPMRVAVNLSAAQFRQTNLSERVARILDEEGLPPPFLELEL 481 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N +++ + +L G +++D+FGTG ++ L+RL+ D +KID V + Sbjct: 482 TENLVMDNPLAAIATVNKLRTLGVGVSLDNFGTGRSSMSDLRRLRVDRLKIDRSLVTGLP 541 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T+ A IV + LA L VA VE+ Q A L G QG L+G P Sbjct: 542 TDPDAAAIVAATLSLAHDLGLPTVAGGVESAAQMAFLRARGCDEAQGNLLGPPVVAE 598 >UniRef50_A0YWR3 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YWR3_9CYAN Length = 624 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 102/510 (20%), Positives = 194/510 (38%), Gaps = 25/510 (4%) Query: 239 IAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + GY P G + L A++ + + +E+ + Sbjct: 99 LTGYSSPEIMGQTPQILQGPRTDYHVLKRLKQALTRGQVFEGEAINYRQDGSEFQNHCYI 158 Query: 296 AVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---- 348 + + L + R + ++ + DPLT L N L Q +Q Sbjct: 159 EPIFNNQGQIIYYLSIHREIIPQNPVQTQFSTRNNLDPLTGLANRSLLLQRLQQSIDQAQ 218 Query: 349 -----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G H + +I + L ++ + + +L G + ++ Sbjct: 219 QHPDYLFAVLLLDLDRFKLINDSLGHQAGDHLLTTIGQRLESCIRPTDMVARLGGDQFVI 278 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L ++ + + + + N + + + + + ++ Sbjct: 279 LLDQVRDLLKVSQVAERIQQYLNKPLTLKNQEVFISASLGIVLSSPSYDHPEDIIRDADT 338 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 +Q+ A ++ + +++ L N +R A+D L ++ QPI Sbjct: 339 ALQQAKA-GGKACYTVFDQTMHRHALERLQLENDLRRAIDHHQLQVHYQPIIAMDTGRIT 397 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPR 574 G++ +L + G++ P+ F+P+ + L VL + Sbjct: 398 GFEALLRWYHPERGMIPPNYFIPIAEETGLIQVIGQWVLREACQRAKLWQLTFPQSPSLF 457 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVNL L N+ + + P+ + LEITE AE+ + +EQL G Sbjct: 458 MSVNLSIHQLTYPNLVEIVSDILTETGCDPRYLKLEITESAIAQKAETVIPILEQLTALG 517 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++ IDDFGTGY++ RL +K+D FV I + A I +I +LA + L V Sbjct: 518 IQLCIDDFGTGYSSLSRLYYFPITTLKVDRSFVAAISQSNGTAKIASAIINLAHSLGLEV 577 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +AE VET+QQ +L G Q QGY +P Sbjct: 578 IAEGVETEQQLTILRSWGCQLAQGYHWAKP 607 >UniRef50_C6BSB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSB1_DESAD Length = 938 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 100/558 (17%), Positives = 210/558 (37%), Gaps = 33/558 (5%) Query: 200 WRRDIAPSLGKEKRAFTLS-----WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 ++ E+ T++ W + + + I+GY F Sbjct: 368 YKMMEKALRASEEEYRTIAEYTFDWEMWIGPTGAVKYVSPSCERISGYPKAYFMEGPVR- 426 Query: 255 VGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSLAFI---LAVLISFSVCLLY 307 V + + W + + + ++ + S+ L Sbjct: 427 VEHILHKNDREFWQKALRGTFPSADGTDMRLFRRDGLLRWVSLTGHQVFADDGTSLGLRI 486 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA---------PEQEAGKSFCCLRID 358 +R + +++ ++ +AL DPLT L N + + +D Sbjct: 487 SLRDITKRKFMEKQLQYEALHDPLTGLANRTLCCDRILQAVERSRRRDNYYFAVVFMDLD 546 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + + + + LL ++E + + + G E ++VL + +V Sbjct: 547 RFKIINDSLGHNIGDKLLVEVSKRLLQTIRELDTVSRFGGDEFIVVLEELASPREGIRIV 606 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + I +++ + + ++ + Q+ + Sbjct: 607 RRIRDCLNDPIMIEGHKINIAASYGVLLSPTEYDKPEEIIQNANVAMHQAKESGRDR-IK 665 Query: 476 SREEMVSGQTTKQVLLLNTIRTA-LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + + + + + L + +R A L +L L QPI + + G++ ++ G Sbjct: 666 VFNKRMLEEAVQAMQLESDLRAAMLSGDELYLDYQPIYSLQSQSVVGFEALIRWEHPRRG 725 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKN 588 ++ P +F+P+ + L V+ + + + S+N+ P Q Sbjct: 726 LVMPGEFIPMAEESGLIFELGSWVVSEACRQMKSWQVNYDSASEMMMSINISPRQFSQPA 785 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I+ + + + + +EITE A+ S+ + +L G ++IDDFGTGY++ Sbjct: 786 LVDNILSKLSEFDLPARNLKIEITETAIMERAKQSVDMLNRLKSAGVLVSIDDFGTGYSS 845 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+ D +KID FV+ + +T + IVR+I +LA L+VVAE VE +QQ L Sbjct: 846 MSNLQEFPLDQLKIDLSFVRKMNESTENLEIVRAIVNLAHNLGLNVVAEGVEEIEQQDAL 905 Query: 709 HKLGVQYLQGYLIGRPQP 726 LG ++ QGYL +P Sbjct: 906 RDLGCEFGQGYLFSKPIS 923 >UniRef50_Q2BQB2 Sensory box protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQB2_9GAMM Length = 677 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 98/499 (19%), Positives = 200/499 (40%), Gaps = 25/499 (5%) Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF-----ILAVLISFSVCLLYM 308 + R L + L + + G + E S + L + ++ + + Sbjct: 161 TLRLFRIRLKELEQGIKQLSVGKMDYTIDVGRKDEISQLAQHFNQMTNRLKASTISVDQL 220 Query: 309 VRIYHRS-EWLNRR---WHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLR 356 + + L ++ A D LT L N A ++ + + + Sbjct: 221 QQEISKRTSELEQQKNSLRQIAEHDSLTGLANREAFLKSLNEVIIHCSTNKRRAAVFFID 280 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + + +++++ L ++ G E +++ Sbjct: 281 LDKFKQINDSMGHSAGDAVLIEMAHRFTSTLRKSDSLARIGGDEFTVIIDPLYESKDAAE 340 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L + + + L + + + T Q L+ Q+ Sbjct: 341 LAKKLIASLEEPYEYEDQTLYLNTSIGIAVYPEDGTTPQELMKNADSAMYQAKKAGGN-T 399 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDG 530 +++ T ++ L + +R+A+ Q L +Y QP + + G + + + + Sbjct: 400 FHFYNRLMNQDTLAKIQLESELRSAIQQDQLTVYYQPQFDLKTRKLVGVEALARWIHPEK 459 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNI 589 G++ P F+PL + L + +L + +A +++ +VNL L + Sbjct: 460 GLIPPCTFIPLAEEKGLIHQVGSIILTKACQQMAQWNGEREAQIALAVNLSAKQLNTPEL 519 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 AG I + ++ Q + LEITE S+ E +++ +EQL G R+A+DDFGTGY++ Sbjct: 520 AGSISDILHTTGLNAQHLELEITESCVLSDPEDAIHKLEQLKALGIRLAMDDFGTGYSSL 579 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+L D +KID FV + N DA I +++ L + +L+V+AE +E + Q +L Sbjct: 580 AYLKKLPLDKLKIDKSFVDGLEINPEDAAICQAVIALGHSLNLTVIAEGLEHEVQATILA 639 Query: 710 KLGVQYLQGYLIGRPQPLA 728 + G QGY +P Sbjct: 640 EQGCDQAQGYFFAKPISAE 658 >UniRef50_A8GZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GZQ7_SHEPA Length = 696 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 98/470 (20%), Positives = 190/470 (40%), Gaps = 20/470 (4%) Query: 278 NQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 F + + + + + L+ + + ++ QA D LT L Sbjct: 202 EDIFWRADGSSFPVDYKSQPLVLQHNRNGAVIS-FYDNSERLEAEALIRHQAHYDTLTEL 260 Query: 335 PNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN + EQ + L +D+ + ++ G + S + LL Sbjct: 261 PNRFLALKRLEQLVEASERSGQMIAVIFLDLDDFKKINDSLGHEAGDQLLISASKRLLNA 320 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 + + + +L G E +++L G + Q + L + + +N L + Sbjct: 321 TRSEDTVGRLGGDEFIILLDGLSSASDAQPLAENLIGGFRKPFYIDNRQLVLTASIGIAI 380 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + ET LL + + ++ + ++++ + I AL++G+ Sbjct: 381 YPNDGETSSELLRNADSAMYHTKSIGRN-TYSYFTHAMNKEVSRRLAIEEQIHGALERGE 439 Query: 504 LLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L + Q R+ G + +L G ++P +F+P+ Q + +L+ L Sbjct: 440 LQAHFQIQLDIRDGSIMGAEALLRWNNPTLGNVSPAEFIPIAEQTGVIEPMGEFILKCAL 499 Query: 561 KWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + T R ++NL P N+ I ++ + P + LEITE S Sbjct: 500 EAARTWQKLFNDKFRVAINLSPRQFRNPNLVQLITDQVYKFGMRPDDLELEITEGVLLSG 559 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 ++ ++QL GF I++DDFGTGY++ L+ I+KID F+ D+ + + Sbjct: 560 HAYTLDALKQLSNAGFCISMDDFGTGYSSLSYLRTYPFQILKIDRSFISDMNKDGKSNEL 619 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + ++A A + V+AE VETQ+Q L + Y QG+LI + PL + Sbjct: 620 IIATIEMAHALGIRVIAEGVETQEQLDELSFMMCDYAQGFLISKAVPLTE 669 >UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M8T6_METRJ Length = 776 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 97/519 (18%), Positives = 180/519 (34%), Gaps = 29/519 (5%) Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + + F++ +P I T + Y + + F S Sbjct: 245 VWNDQFLSISGIPSSRI-HTNSTARSLYKLSRAIVDERSAGRGSTLSTFAAASNALRSGN 303 Query: 293 FILAVLISFSV----------CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE- 341 +L + V + + R A D LT L N + + Sbjct: 304 LVLILPDDRVVSLMQRRTAEKGYVIIFEDITERRRNEARIQQMASYDDLTGLLNRSSFKA 363 Query: 342 ---QAP----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 +A + + L +D+ + ++ G ++ + L + + + Sbjct: 364 KVSEALKASARSKGDFAVHLLDLDHFKVINDTLGHPAGDRLLQMVADRLRGIGALSGSVA 423 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E ++V + + + + R + T + +G + Sbjct: 424 RLGGDEFVIVQQSVTSPAVAEDLARRVLQELERPFDIDGTHVTVGASIGIAIAPFHANDE 483 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL + + T + L + +R AL G+L L+ QPI Sbjct: 484 DRLLKCADIALYAIKGAGR-SGFKIFQHEMEAATRARHALESDLRAALTNGELELHYQPI 542 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + +L G + P F+P+ L + VL + P Sbjct: 543 VDSSTGAIVSCEALLRWHHPVSGYIPPSDFIPVAEDTGLIVQLGNWVLNEACREARKWPS 602 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 +VN+ P +A +I R + + LEITE + I Sbjct: 603 ---TVSVAVNMSPRQFGDPQLAFHVIGALNRSGLPAHRLELEITESVTLGATHKIVETIN 659 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +L + G R++IDDFGTGY++ L+ D +KID FV D+ I+R+I + + Sbjct: 660 KLRQLGIRLSIDDFGTGYSSLSSLRNFAFDKLKIDRSFVSDLDRKAESTAIIRAIVGMGR 719 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + +++V E VET+ Q ++L G +QGY+ RP Sbjct: 720 SIGMAIVVEGVETETQLSILRTEGCDLIQGYVFSRPVAA 758 >UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Q7_DECAR Length = 930 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 92/465 (19%), Positives = 173/465 (37%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + Y +AV+ S M+ + + + D LT LPN Sbjct: 443 RKNGEIYPALLSIAVVRSQDGKVVNYTGMIFDLSQQKTVEALLDQLRTFDGLTALPNRES 502 Query: 338 ------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + L A + S L +D + ++ G + + + +++ + Sbjct: 503 WLSALEQQLANAKRNSSRFSILQLDLDRFKAINDSMGYSVGDQVLIEAAERVKVSLRKYD 562 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G+ ++L+ + + L +R + F + Sbjct: 563 IVARLGGNRFSILLNEIVDPQTIGGICEKLLTAFARPFQMGGINAHISASIGVAIFPNDG 622 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ + A L ++ T L +R ALD+ + + Sbjct: 623 LDSKTLMMAAESALYSAKADGRNL-YKYYSHEMNEMGTHLFKLERMLRVALDRNEFSVVY 681 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N E G + +L + G ++ +F+P+ + L V+ + T Sbjct: 682 QPQVNAKNGELVGVEALLRWHNPELGNVSAVQFIPVAEETGLIVSIGEWVMRAACHQART 741 Query: 566 HPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VNL + ++ + + + + + LEITE + ++ Sbjct: 742 WQTELGFEIPVAVNLSARQFRRNDLLASVQTILDETGLPNRLLELEITEGSLIVDPIGAI 801 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L+ G + A+DDFGTGY++ LK + +KID FV+D+ N D I +I Sbjct: 802 DIMRGLNCLGIKTALDDFGTGYSSLAYLKAFPLNRLKIDRAFVRDLPDNESDCAISNTII 861 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L ++ V+AE VET+ Q+ L G Q QGYL G+P D Sbjct: 862 ALGLNLNMEVLAEGVETEAQRDFLAAAGCQVFQGYLFGKPMSGED 906 >UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEH3_9GAMM Length = 700 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 106/487 (21%), Positives = 201/487 (41%), Gaps = 19/487 (3%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSE 316 + L+ V+ + ++ + + L++ + + Sbjct: 194 HLMSELSQLVTEGQRWSGEMRSIRADGEMFWEYVKASPLMNEDKSVSHYIVVKEDITVQR 253 Query: 317 WLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYG 368 ++ QA D LT L N +AL+ A + + + + +D+ + ++ G Sbjct: 254 DYEQQLLRQAHYDDLTGLANRVLLVEKLTQALQNAQQNNSQLAVLGIDLDDFKNVNDSVG 313 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + ++ + L ++ + + ++ G E +LVL + M + S+ Sbjct: 314 HSIGDTLLKQAAQRLSSCIRSGDIVARMGGDEFVLVLPLLSDAKNAELMAQRIVQKFSKP 373 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + + + +L QS E ++ + Sbjct: 374 FNIAGRQYSVTCSIGISVYPDDTSDAHMMLRNADLAMYQSKDQGRDQ-YQFFTEDINRRL 432 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ L +R +D G+L L QPI N E G++ ++ + DG ++ PD F+P Sbjct: 433 VERLDLEEKLRNVVDNGELALQYQPIFNLETQKIAGFEALVRWPQADGSVIMPDSFIPAA 492 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + + D VL S + A ++N+ PL L ++ + Sbjct: 493 ENIGVIQKIDEWVLASACRETAPFLLSGDDNLCLAINISPLQLEDPGYVAFVMAQLEANQ 552 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + LEITE S+AE++ NI+ L + G R+++DDFGTGY++ LKR +K Sbjct: 553 LEPRHLELEITERVLVSDAETTDRNIKALTELGIRMSVDDFGTGYSSLGYLKRYPLHTLK 612 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV D+ + +V +I +AK + V+AE +ET+ QQ LLH+LG QGY + Sbjct: 613 IDRSFVADMDVDDSARRLVETIILMAKGLQMDVIAEGIETESQQVLLHELGCSQAQGYFL 672 Query: 722 GRPQPLA 728 RP L Sbjct: 673 SRPVSLQ 679 >UniRef50_C6XE67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE67_METSD Length = 910 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 105/596 (17%), Positives = 205/596 (34%), Gaps = 45/596 (7%) Query: 171 SLFTAVLIYNM-LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS---VL 226 SL + L Y L+R+ R + E+R + Sbjct: 315 SLIAGAGLAVSVLLYLLSRLFAYRTQTLKTMRDMHKDLILSEQRWKFALEGSGDGVWDWD 374 Query: 227 LLLLCTPYENDFIAGYLVPV--FFIIFTLGVGKLRYPFLNLTWA------VSTLCLLNYN 278 + + + + ++ ++ + Sbjct: 375 IEKNEVIRSSRWKTMLGMEDWEMGPELEAWKERIHPEDVSRVLSDLEKYMNGETTQYINE 434 Query: 279 QNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 L + + V+ + ++ + + QA D LT L Sbjct: 435 HRLLCKDGSWKWILARGMVVDWAADGRPLRMVGTHTDITKLKESESLVWKQANFDQLTEL 494 Query: 335 PNFRALEQAPEQEAGKSFCCLRI--------------DNLEFMSRHYGLMMRVHCIRSIC 380 PN R QE KS D+ + ++ G ++ Sbjct: 495 PNRRMFYDRLAQEIKKS------NRLGLPLALLFLDLDHFKEVNDTLGHDKGDQLLQEAA 548 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGY 437 R + +++ + + +L G E +++LS E + + + S + Sbjct: 549 RRINHCVRDTDTVARLGGDEFIVILSELEDLNSIDRIAQAILCKLSASFKLGEDIAFVSA 608 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + ++ LL + + A + + +++L+ N +R Sbjct: 609 SMGITLYPTDANSIDNLLKNVDQAMYSAKASGRNR-ISYFTPSMQQAAHQKMLITNDLRL 667 Query: 498 ALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL + L ++ QPI + + + +L G+++P +F+P+ L Sbjct: 668 ALQEQQLQVHYQPIIHLASGTIQKAEALLRWHHPQRGMVSPAEFIPIAEDTGLIMEIGDW 727 Query: 555 VLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIA-GRIIRLFKRYHISPQAVILEIT 612 V E + + + SVN P+ + + + K+ + Q++++EIT Sbjct: 728 VFEQAMVQVKKWQQQRGAHFQISVNKSPVQFKNDSSTHDQWLDYMKQLGLVGQSLVVEIT 787 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E +++ + G ++A+DDFGTGY++ L+R D IKID FV++I T Sbjct: 788 EGLLLDTSQNVSKKLLAFRDAGIQVALDDFGTGYSSLAYLRRFDIDYIKIDQSFVRNIST 847 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D + SI +A LSV+AE +ET++Q ALL G Y QGY P Sbjct: 848 QPDDLALCESIIAMAHKLGLSVIAEGIETEEQCALLKAAGCDYGQGYWFSPAVPAD 903 >UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobacteriaceae RepID=YFGF_ECOLI Length = 747 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 209/728 (28%), Positives = 367/728 (50%), Gaps = 15/728 (2%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 K + L L +++ + I+ A I S +FL ++PL +M+S++ F W + + G+ Sbjct: 13 KWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGI 72 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT---SRYVWQRLFWL 128 F L F +T + + F+++ +++ T R ++ +R + QR+FW Sbjct: 73 FVRKYA--ELGFYETLSL--TANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFW- 127 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA-DAIFTVVDLLSLFTAVLIYNMLFYYLT 187 +V P + ++ +F G + T+++ +L LI L Y++ Sbjct: 128 QIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFII 187 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND---FIAGYLV 244 R++ +P + + + + K + WL AL LLLLLC P F Y + Sbjct: 188 RVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTL 247 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV-ETEYSLAFILAVLISFSV 303 + + G + Y ++L WAV + ++ QN++ L + + FS Sbjct: 248 SLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSF 307 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFM 363 + YM + R + RR A DP+ LPN RAL +A + C LRI +E + Sbjct: 308 IVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEML 367 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 ++YG+M+R+ + + L PL++ E +YQL G++L L L+ + R+ + + L Sbjct: 368 VKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQ 427 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM-VS 482 + W+ + G ++ + LLG+L+ +AE S + + R M + Sbjct: 428 FRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQ 487 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY-DEILARLKYDGGIMTPDKFLPL 541 + +V ++N ++ AL+ L AQPI G+ Y + +L + +++PD FLP+ Sbjct: 488 RELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPV 547 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 +F LS+ D+ V+E L+++A + RF++NL P ++ Q + +L +Y Sbjct: 548 AHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQ 607 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I +I E+TE A +N + + ++ L + G +IAIDDFGTGYA+Y RLK + AD++K Sbjct: 608 IEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLK 667 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 IDG F+++IV+N+LD IV SI LA+ K + VVAE+VE ++ + + LG+ Y+QGYLI Sbjct: 668 IDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLI 727 Query: 722 GRPQPLAD 729 G+PQPL D Sbjct: 728 GKPQPLID 735 >UniRef50_Q15PZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PZ4_PSEA6 Length = 590 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 94/438 (21%), Positives = 170/438 (38%), Gaps = 29/438 (6%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLM 370 + H A D LT LPN + L Q A + + + +D + ++ G Sbjct: 137 QQELHQLAFYDSLTGLPNRQYLMQDLKRFLAMAKRNKYQAAMLFIDLDRFKRINDTMGHS 196 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQ--------------LPGSELLLVLSGPETEGRLQH 416 +R + L +++++ + G E + LS Sbjct: 197 YGDKLLRKVAHRLQANLRDSDTFARVAAEKNKEAPQLSSFGGDEFTIFLSRLNDPNEAML 256 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + S + + F + E + LL + Sbjct: 257 VAERVIRSFSTPFQLEQYEVVVTPSIGISTFPNDGEDAETLLKNADTAMYFAKQSGR-CC 315 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 ++ ++ + ++ L +R AL +++ + QP G + ++ L G Sbjct: 316 YKFYQDSMNSKAAARLQLEQDLRQALKSNEIVPFYQPQVCAKTGRIVGVEALVRWLPLKG 375 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 GI+ PD+F+P+ + L VLE R ++N+ Q + Sbjct: 376 GIIPPDEFIPIAEETGLINELGRLVLEQGCYQAKQWLDSGHSVRMAINVSAHQFRQLDFT 435 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + ++ + + P + LE+TE S+AE ++ + +L G +A+DDFGTGY++ Sbjct: 436 QTVAKVLAQSQLPPSLLELELTESVIMSDAEENIARLVELKSLGVSLAVDDFGTGYSSLS 495 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR DI+KID F+ D+ + D IV +I LA++ +L V+AE +E Q +L Sbjct: 496 YLKRFPIDILKIDRSFMCDVNSAPDDVAIVEAILALAESLTLGVIAEGIEYCSQITILKN 555 Query: 711 LGVQYLQGYLIGRPQPLA 728 LQGYL RP Sbjct: 556 TSNLLLQGYLFSRPVAAD 573 >UniRef50_Q46PR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=3 Tax=Cupriavidus RepID=Q46PR7_RALEJ Length = 1076 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 102/515 (19%), Positives = 190/515 (36%), Gaps = 19/515 (3%) Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 Y + +A L + + L + +++ + Sbjct: 525 GAGIRYADLHVADELAERARDLTRELGETIAPGLPALVAKARLGLVDEREWTWVRKGGSR 584 Query: 289 YSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA-- 343 + L L + + ++ AL D LT LPN L + Sbjct: 585 VPVQVTLRELPAEDGQPRQYQAIACDLTERHRVDEYIRHLALHDALTGLPNRAELTERCE 644 Query: 344 ------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + L +D+ + ++ G + +R+I L +++ + + ++ Sbjct: 645 AVLLHARRHGERVALLLLDLDHFKHINDSLGHPVGDDVLRTIADRLKAAVRQGDLVARMG 704 Query: 398 GSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +VL G + + + + +R + L + F + E+L L Sbjct: 705 GDEFAVVLGGLRHDTEAELAASKILARVSEALEIGGQRLRVTPSLGIAMFPADGESLTDL 764 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 L + L ++ + ++ + +R A+D+ + L QPI + Sbjct: 765 LKSADAALY-AAKQGGRAQLRRFASEMAEASLARLTIEGLLRRAVDEQEFTLRYQPIVDT 823 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDK 570 G + ++A + G+M P +F+P+ Q L L + + Sbjct: 824 STLAVTGVEALMAWHTPERGMMQPSEFIPIAEQCGLIGALGEWALATACSDIQALRTALG 883 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + +VN+ PL L Q + R ++ + P ++ +E+TE E+++ +L Sbjct: 884 RDIEVAVNISPLQLRQPGFPDLVARTLQQAGLPPGSLTIEVTEGILVEGGETTIDTFLRL 943 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G +++IDDFGTGY+ L RL +KID FV D+ D ++ +I L Sbjct: 944 RELGVQLSIDDFGTGYSGLHYLTRLPISRLKIDKSFVDDVARPGHDQVVAAAIIALGHQL 1003 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 L VVAE VET Q L G LQGYL R Sbjct: 1004 HLKVVAEGVETMAQFEFLRAQGCDALQGYLFCRAV 1038 >UniRef50_C6XCZ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ3_METSD Length = 776 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 123/742 (16%), Positives = 247/742 (33%), Gaps = 64/742 (8%) Query: 14 FTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFC 73 + + + L ++ A+ P F W + LCG+ Sbjct: 58 LAVCLAWMTFFLIVYGLRKALVWVYKRTPVHAYPPG-------FWLNWFRALSGLCGIAW 110 Query: 74 TNLWNFHLSFLQTAVMLGSQTFVV--LCACAILRWQLGTRWRYGLTS---RYVWQRLFWL 128 F L + T + +C A++ + Y R FW Sbjct: 111 GLSGIF-LFYPHDTAHQAFLTLALAGVCGGAVMAYATDKPTAYAFAGGLILLGLPRFFWG 169 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 G + + ++ L + S + V+ +++ + I M Sbjct: 170 GNHFSMLMAVNLLLFILYVTI---ASFKLANRLRENIVLRIMAHESQEAINAMAQRQKLH 226 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + +P + + SW AA + ++ + ++ + Sbjct: 227 IDHTP-----------LAVIEWDVNFRVTSWNAA----AEHIFGYPPSEAMGRHMSFIVP 271 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCL 305 + + + ++ + ++ + + + + Sbjct: 272 PDGQMMAQDIMSKLTH------EAGGQHWQHDNVRRDGRVIHCEWFNTAIKNDQNRIIGF 325 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 +++ + A D LT LPN R L + Q + + Sbjct: 326 ASLIQDETAYKKAQDEIERLAYFDALTNLPNRRLLMERLSQALNNSRSSHRIGGLMFIDL 385 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ-- 415 DN + ++ G ++ + LL ++ ++ + ++ G E +L+L + Sbjct: 386 DNFKTLNDSRGHAFGDLLLKEVAARLLRAVRNHDTVARIGGDEFVLLLEDIGRDESAAIQ 445 Query: 416 ---HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + S N F ++ +L + ++ Sbjct: 446 TASQIAEKILADISLPFDLGNYKHQCSASIGICMFYRQGMHVEEVLKRADAAMYETKRAG 505 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLK 527 +E + + L N +R AL G LY QP + G + +L Sbjct: 506 RN-NYRFFDESMLPVIDSRASLKNDLRFALSLGQFELYYQPQVDGELRTTGAEVLLRWHH 564 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLL 585 + G++ P +F+PL + + VL+ L R SVN+ + Sbjct: 565 PERGMVPPGEFIPLAEESGMIIPIGNWVLQQACMQLGKWSHHAKTSQLRLSVNVSAMQFG 624 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + ++ + + ++LE+TE N + + ++ L G +++DDFG G Sbjct: 625 QADFVEQVRHALLESGCNEKLLVLELTESLVIQNIDDIVSKMQALKSIGVSLSMDDFGLG 684 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNT---LDAMIVRSITDLAKAKSLSVVAEFVETQ 702 Y++ L RL D +KID FV++I N A+IV++I + K L V+AE +E Sbjct: 685 YSSLSLLLRLPLDSLKIDQSFVREIQDNAPKNDSAVIVQTIVAMGKNLGLDVIAEGIEEP 744 Query: 703 QQQALLHKLGVQYLQGYLIGRP 724 QQA L ++G QGYL GRP Sbjct: 745 YQQAFLEQVGCHAYQGYLYGRP 766 >UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAR7_SULNB Length = 958 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 93/492 (18%), Positives = 194/492 (39%), Gaps = 31/492 (6%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHR 314 W+ + + +AV+ + + + Sbjct: 463 WHQLLTAGRWSGRVEN--------VTKDGKVLPVWLTIAVVRNEKQDIQNYIAIYTNLEE 514 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRH 366 + + + A D LT LPN + E + + + + +D + ++ Sbjct: 515 IIKMETKANYLAYHDSLTGLPNRSSFEMRINEILSVADIEKDKIAVLFIDLDRFKVINDT 574 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKL-YQLPGSELLLVL----SGPETEGRLQHMVNIL 421 G + + + + + +N+ L ++ G E ++++ E + + +++++ Sbjct: 575 LGHHIGDEMLIELAHRIQTQL-DNDTLLARIGGDEFVVIMKLKMHKKEAGEQAEKLLDVI 633 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 I N L+ + + + ++ + + + Sbjct: 634 RE-PIDIQNYHLNTTASIGIAIYPDDGKDKNEIVKHADSAMYHAKEKGKD-TFQFYTKQL 691 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 S ++ L + A+++ +LLL+ QP ++ G + +L GI++P+KF Sbjct: 692 SLDVEARLNLEQELLHAIERKELLLHFQPQYALESRNIIGVEALLRWKNEQLGIVSPEKF 751 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLF 597 + + + L V E K + S+N+ + +++I R+ + Sbjct: 752 IGIAEETGLIVSIGYFVFEEACKTYMHWQKEGIDIDSISINMSSIQFREEDIFERLQEII 811 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 R I + +EITE + ++ +E L G +I+IDDFGTGY++ LKRL Sbjct: 812 LRIGIPAHKIEIEITERFIMEYSTINLTILEDLRNIGCKISIDDFGTGYSSMSYLKRLAL 871 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D IKID F+ D+ ++ DAM+ ++I L+K+ V+AE +ET +Q+A L K G Q Sbjct: 872 DTIKIDKSFITDLPHDSHDAMVSKAIIALSKSLGYQVIAEGIETPEQEAFLKKNGCDIGQ 931 Query: 718 GYLIGRPQPLAD 729 G+ +P D Sbjct: 932 GFYFAKPMTSED 943 >UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y7_9GAMM Length = 1123 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 94/504 (18%), Positives = 190/504 (37%), Gaps = 28/504 (5%) Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-- 305 F++ L + + A+ + +T + ++ + + Sbjct: 604 FLVSGLTKSDFQQLSESFAAAMKAYGIWRGEIQCRHKDKTMFPAYVSMSAVYDTDGNICN 663 Query: 306 -LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 + + + + A D LT LPN R L Sbjct: 664 MVGVFSDISEVKEAQAKIERHANYDILTDLPNRRLFTDRLQQAILRCGRHNEKLCLMFLD 723 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G ++ + + ++E + + +L G E ++LS + + + Sbjct: 724 LDRFKDVNDTLGHEFGDQLLKQMAVRIQACVREVDTVARLGGDEFTIILSEFDGKSHAVN 783 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L S I L + + + L+ + A Sbjct: 784 IAQKLISEIEKPITVQEQTLRVTTSVGITFYPDDAIDSGMLIQNADRAMYAAKDMGG-SA 842 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE----GYDEILARLKYD 529 + + +LN + A+++G++ +Y QP+ E + ++ + Sbjct: 843 FKFYTTELELSWLSRTFILNELEAAIEKGEIEVYYQPLIPANTETACQSAEALVRWQHPE 902 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK- 587 G+++P FLP + + + D V + + + T + SVN + Sbjct: 903 RGLISPADFLPQAERMGMIEKIDDFVFSQVCQQIKTWQANGIGDVHVSVNRSAHNFGNQR 962 Query: 588 ---NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + I I+ + LEITE S + +++L + G +IA+DDFGT Sbjct: 963 GRLDWLAYIREQ----GINAGLITLEITESVLMRRHAESGHLLKKLRQAGVQIAVDDFGT 1018 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK + D +KID F++D+ + D I+ +IT +A+ + V+AE VET Q Sbjct: 1019 GYSSLSYLKEMDIDYLKIDRSFIRDLEADDNDRAIIEAITGMARHLGIEVIAEGVETLSQ 1078 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 + +L K+G +LQGY +P P+ Sbjct: 1079 KEILEKIGCHWLQGYFFAKPMPVD 1102 >UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodopseudomonas palustris RepID=Q07J13_RHOP5 Length = 891 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 99/559 (17%), Positives = 205/559 (36%), Gaps = 23/559 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVP 245 M + + +++R + L ++ Y + Sbjct: 318 MFLLGRHLRRREDDTQRQLRLEKQRLRLAINNMTQGLTLFDAEARLVVCNQRYLEIYGLT 377 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL---AFILAVLISFS 302 + + + ++ F + + + + E ++ + ++ Sbjct: 378 TEMVPPGITLREMIQYFRDRGGDRDVIERFLCSGDDFSRGSHEVTIGDKSLLITREPVEG 437 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------QEAGKSFCCL 355 + + R A D LT LPN + Q + + + Sbjct: 438 GGWVTTHEDITERKRAEARIAYLAHNDELTDLPNRSSFRQHVQSALANLGDGFNVALLYV 497 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 ID+ + ++ G ++ + I L + ++ + +L G E +V++ E + Sbjct: 498 DIDDFKGINDTLGHVVGDLLLHHIASDLKRAVGKDGFVARLGGDEFAVVVTNIEAMDEVT 557 Query: 416 HMVNILNSRQIHWNN---TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S +++ L + +TL L+ + + Sbjct: 558 ALTERVQSALYEFHDCGEHRLSADASIGIAIAPQDGKTLDDLVSNADLALYAAKSEGR-R 616 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYD 529 + + + LL ++ A+ + ++ QP+ + G + +L Sbjct: 617 TYRFFKPEMEVALKARHLLGADLKRAVVEHQFDVHFQPLVDLRSDQVVGCEALLRWRHPT 676 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G+++P +F+P+ + L VL + AT P +VN+ P+ ++ Sbjct: 677 RGMVSPAEFVPVAEEIGLIDELGEWVLAESCREAATWPA---HMTVAVNVSPIQFRRRTF 733 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ + + Q + LEITE + ++++ + +L G +IA+DDFGTGY++ Sbjct: 734 PLKVAAALGQSGLPAQRLELEITEAVLIRDDDAALAILHELRALGVKIALDDFGTGYSSL 793 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L R D IKID FV + A IV+++ +A A +AE VET QQ+ LL Sbjct: 794 SYLHRFPFDKIKIDRSFVATLAEEKASATIVQAVVSIAAAGDKITLAEGVETIQQRDLLK 853 Query: 710 KLGVQYLQGYLIGRPQPLA 728 + G Q +QGYL P P A Sbjct: 854 QFGCQQMQGYLFSPPVPAA 872 >UniRef50_C8WTB0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTB0_ALIAD Length = 799 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 131/750 (17%), Positives = 248/750 (33%), Gaps = 45/750 (6%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL------------FI 58 I I+++ F + L+ ++ A++ S +F P + + + Sbjct: 55 IGIWSMHFVAMLALMLPAQMTYNWAVVALSLVFAMAGPGAALYVVARSASPVKLAYGALL 114 Query: 59 FGWRGVVPVLCGMFCTN---LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG 115 G V GM ++ + ++ + + R W Sbjct: 115 MGAGIVFMHYTGMAAMTVEGGGFYYRAGPFVLSVVIAIVASYVALWLSFRLATARGWLAQ 174 Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMY--LVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 LV I I Y + + F P +V + Sbjct: 175 AAK-------VACALVMGIAIAGMHYTGMWATVFVLPAHRRAAPMAYSGPLALVVAVFSA 227 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 +L R+ ++ R + FTL A+ P Sbjct: 228 FILLAAIATVMLDRRLQADRRRLRLADERFRSLYTHHSDAIFTLDTRGAIV-----DQNP 282 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL-- 291 + + + + F + + P + + + + L+ + + Sbjct: 283 RAKELVPEHELRKSARAFARMIDRRDRPRVFKDYRRALGGSTTNGEFLLRAGDRALHMSA 342 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS 351 I VL + + R + R + A D LT L N R E + + Sbjct: 343 THIPIVLDDEIEGVFLVARDVTAEKVAAERMNYLAFHDTLTQLANRRHFEARVDDFIRDA 402 Query: 352 -------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + +D + ++ G ++ I R L + E+ + ++ G E + Sbjct: 403 RPGDEMQILFVDLDRFKSVNDTLGHEFGDKLLQEIARILKEVAGEDALVARMGGDEFTIT 462 Query: 405 LSGPETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 L E + ILN + + + L M F + T LL Sbjct: 463 LFRQPMERAVAVADAILNRLRKPVRVEDRPLYMTASVGIASFPRHGVTRDMLLRHADLAM 522 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGY 519 + A EE + ++ L +RTA +GD ++ QP + G Sbjct: 523 YTAKAEGR-STYRLFEERTAANAKSRLELEQELRTAAQRGDFEIHYQPKIDMRQKAVVGV 581 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + +L + G + P +F+P+ + L A L + + + +VNL Sbjct: 582 EALLRWRRATGEYVPPCEFIPIAEETGLIAPIGEWCLRAACRQAKAWLDAGRPLSVAVNL 641 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P +L + + + + +E+TE +AE + + G +++ Sbjct: 642 SPYQVLTDGFLDVVREVLDETGLPAHYLEIEVTESAMM-DAERAERFLAGCQALGIEVSL 700 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ RL L +++KID F + V +V SI D+A + VAE V Sbjct: 701 DDFGTGYSSLSRLTHLPLNVVKIDRAFTQRAVDGGRARALVASIVDIAHNLGMRCVAEGV 760 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET++Q +++ LG QG+ RP P +D Sbjct: 761 ETKEQLSVIEALGCDEAQGFYFARPVPPSD 790 >UniRef50_B9MF12 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Comamonadaceae RepID=B9MF12_DIAST Length = 630 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 100/464 (21%), Positives = 185/464 (39%), Gaps = 16/464 (3%) Query: 281 FLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + ++ + L + ++ VR L R H QA D LT L N Sbjct: 150 LQRRDGSQVPVDIALGHSSAHGGTVVAFVRDVSDLRRLEARMHYQATHDTLTGLLNRWKF 209 Query: 341 EQAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 Q EQ + L +D+ + ++ YG ++ + R L + + Sbjct: 210 GQRLEQAIAEQAAAQSPPFALLLLDLDDFKAINDGYGHAAGDQVLQEVARRLRGALGTGD 269 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 L +L G E ++L G + + + L L+ G + Sbjct: 270 ILARLGGDEFTVLLPGVACATQAECVAARLMQALCVPCRVQGFELNFGASMGIALCPQDA 329 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL + + + +++ L + ++ AL G L L+ Sbjct: 330 GDAATLLRYADMAMYHAKHRGRA-NFAFYAPSMGRKMAEKIQLHDRLKLALAYGGLTLHY 388 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP G + +L G ++P++F+P+ L V+ + + +A Sbjct: 389 QPQVEVATNRMVGVEALLRWHDPQLGEVSPERFVPVAEATGLILELGAWVMAAACRQIAA 448 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R +VNL L Q ++ ++ R + +H+ P+ + LE+TE +A ++ E + Sbjct: 449 WERQGMRLRVAVNLSAQQLRQTDLVEQVARNLRTHHVPPELLELEVTESEALADPEQACQ 508 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L G +A+DDFGTG+++ LKRL IK+D F++++ + D +VR++ Sbjct: 509 VLNELRALGVAVALDDFGTGHSSLAYLKRLPVSHIKVDREFMRNVPASGGDTTLVRAVVA 568 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA L VV E VET++Q L ++ QG+L + D Sbjct: 569 LAHTMGLRVVVEGVETREQLQFLREMQCACYQGWLFAKALSPDD 612 >UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Tax=Caulobacter RepID=Y091_CAUCR Length = 809 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 132/738 (17%), Positives = 249/738 (33%), Gaps = 44/738 (5%) Query: 14 FTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMF 72 + F V L SP + L +M++ LF+ V Sbjct: 69 WATHFIAMVAFTPGLKTGYSPTGTL-----------LSLMIAALFMASGFAVASAQRSTT 117 Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQL-GTRWRYGLTSRYVWQRLFWLGLV 131 + A+ + V + G G+ L Sbjct: 118 NDFAGGVLIGLGVAAMHYMGMSAFVTQGQLVWEHATVGMSAVLGVGGATAALLLAGTART 177 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 L L + + + + + + +T MI+ Sbjct: 178 IRRQAVGGGML--CLGIVMLHFTGMSAITIVPDASLTVPDQLLSGGMLTLAVGSITSMII 235 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 + + S +R L+ A ++++ + ND A + V + Sbjct: 236 LGGLGAVAIESQTSRSA--LERIRRLANAAYEGLVVVQ--SGRINDANAAFCDLVGAPLA 291 Query: 252 TL-GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF-----SVCL 305 L G S + + E + ++ S Sbjct: 292 ELVGRPLFGEILTFDEADPSREDVRREGRLRPLVGGREIPVEVFSRLMDDGARVETSGLT 351 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRI 357 + VR + A D LT L N +L+ + C+ + Sbjct: 352 VLAVRDLRERRAAEEKIRYLAEHDGLTGLLNRNSLQMRLAAAIDRVEASGESLAVICIDL 411 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV-LSGPETEGRLQH 416 D+ + + +G + + R L +Q +L G E ++V ++G + Sbjct: 412 DHFKEANDQHGHLAGDALLVETARRLQSAVQAPSFAARLGGDEFIVVQIAGGDQPAVAAE 471 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L + + ++ L MG + + T + L+ ++ + Sbjct: 472 LAGRLIEMLAAPVPFDGQELAMGSSLGVSLYPDDGRTAEALMANADMALYRAKESGRGV- 530 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + + ++ L +R + +L+++ QP+ + E G++ ++ Sbjct: 531 YRFFKREMDDTIRERRNLARDLRQGIADNELIVHYQPLARAADGEVCGFEALVRWKHPTR 590 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G++ P F+P+ + L VL A K R +VNL P+ L + Sbjct: 591 GMIPPLDFIPVAEENGLIEALGDWVLRRACADAAAWE---KPLRIAVNLSPIQLHNPALP 647 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + +SP + LEITE F + + ++ N+ +L G RIA+DDFGTG+++ Sbjct: 648 TLVHEVLITTGLSPSRLELEITESALFKDYQRALDNLRRLKALGVRIAMDDFGTGFSSLS 707 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+ D IKID FV++I + IVR++ L ++ + VVAE VET++Q L Sbjct: 708 TLQSFPFDKIKIDKSFVENIHRHDRATAIVRAVLGLGRSLEIPVVAEGVETEEQILFLRG 767 Query: 711 LGVQYLQGYLIGRPQPLA 728 LQGY IGRP P+ Sbjct: 768 EDCAELQGYAIGRPAPVD 785 >UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7B5_ALHEH Length = 735 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 98/553 (17%), Positives = 200/553 (36%), Gaps = 26/553 (4%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVPVFFII----FT 252 + D E+R +L +V L +P ++ Sbjct: 167 RQLDRRALQEAEQRYRSLFTEHPDAVFQVDLEGRLRAANRSATRLIGLPESELLGRHYHA 226 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVR 310 + R AV +Y ++ L +I V + + R Sbjct: 227 FVFSEDRRRSDAAFEAVCRGKAQHYEVQARTANGSKVELEITNLPIIVDDRVVGIYGIAR 286 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 + R A D +T LPN R E + + +D+ + Sbjct: 287 DVTLRKQYEARLAYYASHDTITGLPNRREFESRLRHDFYLCRQHNDLLAVLYIDLDDFKP 346 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + R L L+ ++ L + G E +++L G E + + + Sbjct: 347 VNDSLGHAFGDQLLVAAARRLERLLGPSDTLSRFGGDEFVMLLPGLSGEAEALAVADRVL 406 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 R + + + ++ + ++ + +Q+ Sbjct: 407 TLFKRSHSLGRHEVHISASIGIALNHRDVKSPEEMVQFANRAMQQAKQQGRN-TWRRYAG 465 Query: 480 MVSGQTT-KQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTP 535 + + + + L ++ A+ L+L+ QP+ + + ++ + G++ P Sbjct: 466 ELGTRAQGEDISLRRDLQEAIAGDQLMLHYQPVVDAATGYLHSVEALVRWQHPERGLIPP 525 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRII 594 F+PL Q +L + +A + +VN+ PL + + Sbjct: 526 GVFIPLAEQTGQIIDIGHWILHRACRDMADLKARTGRTLPVAVNISPLQFRRPGFLDNLA 585 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++ + + + LE+TE ++ E+++ + L G AIDDFGTG+++ L+ Sbjct: 586 QVLSESGLPAETLELELTEGVLMADTEATIDTLAALRSLGVHAAIDDFGTGFSSLSYLRY 645 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +K+D F++D+ + A IV+ + +A L+VVAE +ET+ Q+ L G Sbjct: 646 LPIDKVKLDRSFIQDVTNSRNTAAIVQGVITMAHHLELAVVAEGIETEAQRRDLQDRGCD 705 Query: 715 YLQGYLIGRPQPL 727 LQG+ RP PL Sbjct: 706 LLQGFFFARPMPL 718 >UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMJ7_9PROT Length = 829 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 111/559 (19%), Positives = 221/559 (39%), Gaps = 43/559 (7%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + TR+ V + +R + KE+ TL V +L I ++ Sbjct: 285 FFTRVQVPLENGSLFFRIET----NKEEFDKTLRNNRQSLVAILFFII------IVTFIT 334 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + I L + P + + + NY + E L + S Sbjct: 335 SLVIINNMLSI-----PLKKILNGIEIISKGNYENRIDITSKDE---------LGAISSQ 380 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLR 356 M + + A DPLT +PN +A + L Sbjct: 381 FNNMADEIAKR---ETQLDELAHVDPLTKIPNRVMFIETLEKSISRAKRLNTKLAVFFLD 437 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D+ + ++ G + + I + L +M+E++ + ++ G E +++ E+ + Sbjct: 438 LDDFKNVNDTLGHYVGDKLLIEIAKNLSIVMRESDTISRIGGDEFNILIEDLESLSHIGE 497 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + ++ N + + + + E LL ++ + Sbjct: 498 IAEKFIKQMTIPLYIENNAITISGSIGISIYPDDGEDTTTLLKNADLAMYKAKDNGRNQ- 556 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDG 530 + + +K++ +L ++ A+++ + LY QP + + + ++ + Sbjct: 557 YSFFSKELEVSLSKRINMLKELKEAVNRDEFRLYYQPKFSLIDGSIKSAEALIRWDSKEF 616 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNI 589 G ++PD F+PL + V++ + A+ G SVN+ + + +I Sbjct: 617 GFVSPDDFIPLSEDSGEIVKIGAWVIKQACEDFASWSELGLGITQVSVNVSNVQFTRDDI 676 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + + ISP+++ +EITE ++E ++ + + K G +A+DDFGTGY++ Sbjct: 677 VKVLSDNIIKSGISPESIEVEITESYMQEDSERALQILHDVRKIGVDLAVDDFGTGYSSM 736 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL + +KID F+ DI + D I R I LAK L++ AE +ET +Q L Sbjct: 737 SYLKRLPINRLKIDRSFIGDIPHDVDDVEITRIIVALAKTMGLAITAEGIETLEQMHFLQ 796 Query: 710 KLGVQYLQGYLIGRPQPLA 728 ++GV QGY+ +P P Sbjct: 797 EMGVDEGQGYICSKPLPYE 815 >UniRef50_A5IAE9 Sensory box protein, GGDEF family protein, LssE n=5 Tax=Legionella pneumophila RepID=A5IAE9_LEGPC Length = 741 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 92/444 (20%), Positives = 175/444 (39%), Gaps = 18/444 (4%) Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 +V ++ R L + QA D LT LPN L + + Sbjct: 290 QTVGRVWSFRDITEQTRLKEKLEYQATHDALTNLPNRLLLIDRIEHAISGYARHKMKFAI 349 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 +D + ++ + ++ L L+++ + L +L G E +++ +E Sbjct: 350 LFFDLDRFKMINDSLSHEAGDQLLCAVAERLRSLVRKEDTLARLGGDEFVMLFQSFNSEE 409 Query: 413 RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 ++ + + + H +++ + + +T+ LL Q+ Sbjct: 410 QIAGVAQKILKSFQKPFHIAERDINIHVSIGISVYPTDGKTVNTLLSNADMAMYQAKFRG 469 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 E ++ +T +Q L ++ A+ + L QP E + ++ Sbjct: 470 GNQ-FSFYTEKLNKKTNQQFQLELDLQKAIVHHEFFLLYQPQFTVNTHEIRSMEALIRWN 528 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 GI+ P F+P L VL K + R + N+ L Sbjct: 529 HPQKGIILPLDFIPTAESSGLIVPIGEWVLRETCKQIGAWRTMGLPEIRVACNVASKQLR 588 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q++ + L K Y + P + LEITE + I++L G I +DDFGTG Sbjct: 589 QRDFPAMVEDLLKEYSVEPHCLELEITENVIID--KEIQRTIKKLKSLGVLIILDDFGTG 646 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 ++ LK++ D +KID F+++I + D I+ +I +A++ + +++AE VETQ Q Sbjct: 647 NSSLNLLKQVAVDSLKIDQSFIQNISKSPGDEAIIDAIIAIAQSMNFNIIAEGVETQNQL 706 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L K +QG+L+ +P P + Sbjct: 707 KFLKKRRCNDIQGFLMSKPIPPEE 730 >UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYS6_METML Length = 934 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 118/635 (18%), Positives = 229/635 (36%), Gaps = 38/635 (5%) Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 W + I + + ++ + L ++ GD VV ++ L + L Sbjct: 287 WFVVFAGILLGTLLIVIILWQLRRLILNPIGGDPALAIDVVKRIA--AGDLAQDGLNAKP 344 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL-----LLCTPYENDF 238 ++ S + R I +R + A + + ++ Y Sbjct: 345 DTLMASVLEMRQKLRESIDTLRQNAERMRLSASVFDHAHDGIFITDPHANIVEVNYAFTQ 404 Query: 239 IAGYLV--PVFFIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSL---A 292 I GY + I LG L++ W + + Y+ Sbjct: 405 ITGYTRNGALGRIPQELGFVTYDDSLLDVLWLQAESNSEWRGETWCRRKNGDVYAAWLDI 464 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------ 346 F + + + + +++ + A DPLT LPN L +Q Sbjct: 465 FCVRDEANQVKNFVGLFSDITQAKEQQQNLERMAYHDPLTQLPNRALLSDRLQQALARAE 524 Query: 347 --EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + CCL +D + ++ G + + + + +++++ + +L G E ++ Sbjct: 525 RSGELLAVCCLDLDGFKPVNDTLGHEAGDYLLVQLAVRMSACLRDSDTVARLGGDEFAVL 584 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L G ++ + L S + + + + F + LL Sbjct: 585 LCGLQSIDECTQTLERLLSVIKTPYSIGDKSVTVSSSIGYTIFPDDGCEPDTLLRHADHA 644 Query: 462 AEQSCAHHHVLALDSR---EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 Q+ + + G + + AL + LY QP + + Sbjct: 645 MYQAKLNGGSRVQQFDSHHDRQFRGLRQDRERVEA----ALSNQEFRLYYQPKVDLRQGK 700 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF 575 G + ++ + G+ +P FLP++ + S V+ L + + Sbjct: 701 VVGMEALIRWEHPELGLRSPATFLPIVENTDFSIPLGEWVISEALGQIRVWQAAGLDFQV 760 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN+ ++Q N R++ L + ++P + LEITE A + I + G Sbjct: 761 SVNIAARHIVQSNFTERLVLLLAEFPEVAPHKIELEITETAAIEDVSGVANTINTCKQLG 820 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 A+DDFG GY++ L+RL + IKID FV+D++ + D +V + L++ V Sbjct: 821 VSFALDDFGVGYSSLTYLRRLPVETIKIDQSFVRDMLQDVDDLAVVAGVISLSRDFKRKV 880 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VE +Q L ++G +QGY + RP P + Sbjct: 881 VAEGVENSEQGLWLLRMGCSVVQGYGVARPMPADE 915 >UniRef50_C6MGV8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGV8_9PROT Length = 813 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 173/443 (39%), Gaps = 17/443 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-------- 351 + M+ + + A D LT LPN + Q K+ Sbjct: 354 GMEKQFVVMISDITKIRETQEQLAHFAYYDSLTNLPNRILIMDRLNQAIAKAARDSSLLG 413 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G + I + +L ++++++ L +L G E + V E+ Sbjct: 414 ILFIDLDNFKRINDTLGHKHGDSMLCLISQRILSVLRQSDTLGRLSGDEYIAVAGNVESY 473 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 L + + S+ + +N + + + E L+ ++ + Sbjct: 474 DALIRIAGKILDCISKPVVLSNMEIIPSCSIGISVYPHHSENPDHLVQMADTAMYEAKKN 533 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILAR 525 ++ + + + AL + LLY QP NKE G + ++ Sbjct: 534 GRN-NYAFYHPGLTQRAAHHLTRERELHHALINDEFLLYFQPQFSLINKEIIGVEALIRW 592 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTL 584 G++ P + +P+ L VL+ K L D R SVN+ L Sbjct: 593 KHPKRGLLLPAEIIPVAETSRLIIDIGNWVLKEACKQLHQWRTDGLDNLRMSVNVSIRQL 652 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 N+ I +L +Y + ++ LEITE N + +EQL K G I+IDDFGT Sbjct: 653 ADNNLQKFIAKLLHQYSLPAHSLELEITESCL-QNELIYISCLEQLKKLGILISIDDFGT 711 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+ LK L +KID FVK I + D I ++ LA+ +L V AE +ET Q Sbjct: 712 GYSCLSSLKNLPIHRLKIDQSFVKGIPLDKNDCAIATAVLALAQKLNLQVTAEGIETYDQ 771 Query: 705 QALLHKLGVQYLQGYLIGRPQPL 727 L G LQGY + +P Sbjct: 772 ITFLLGHGCNELQGYWLSKPVSP 794 >UniRef50_B1ZLG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Alphaproteobacteria RepID=B1ZLG9_METPB Length = 700 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 107/534 (20%), Positives = 191/534 (35%), Gaps = 31/534 (5%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + E R + +L + C P I L V + +L Sbjct: 154 LIDGEGRVVLANERMHE-ILAVPGCDPLVGAAIRAVLSEALSE-DAALVFVADHLRPDLG 211 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 S + + + + L + + + R+ A Sbjct: 212 LDSSAVSEIVHRERILSVTTRRLA-----------AGGWVSTFVDVTERRQFERQIQHLA 260 Query: 327 LTDPLTLLPNFRALEQAP------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT L N L QA E + + +D + ++ +G ++ + Sbjct: 261 QHDLLTDLANRATLHQALTETLASETWESCAVLYIDLDRFKPINDTFGHAAGDQLLQEVA 320 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--RQIHWNNTGLDMGYG 438 R L ++ + + +L G E L+L + + IL + + + +G Sbjct: 321 RRLRRTVRAQDVIARLGGDEFALILRPADPQHLAGTAQQILEALNQPYAVRRLPIRIGAS 380 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 LL ++ + + L + A Sbjct: 381 IGIAAAPLTGRDPDLLLRNADLALYEAKKEGRNR-YSFYNPSMGDTAAARASLEADLNRA 439 Query: 499 LDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L+Q + +L+ QPI G++ +L + DG ++P F+P + L + Sbjct: 440 LEQREFVLHYQPIVRARTGATIGFEALLRWRRPDGVAISPADFVPAAEEAGLMPEIGAWI 499 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 L + A P +VN+ L + R + P + +EITE Sbjct: 500 LAEACREAAAWPA---HLTVAVNVSATQLRSALFIDAVERALAASGLPPHRLEVEITETA 556 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N E ++ +++L G IA+DDFGTGY++ + +KID FV+ + + Sbjct: 557 VLQNRELALSLLQRLRAMGVMIALDDFGTGYSSLSFVHTFPLTRLKIDRSFVQGLGRDPQ 616 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALL-HKLGVQYLQGYLIGRP-QPL 727 IVR+I L+++ L+V AE VET++Q LL + G+ LQGYL+GRP P Sbjct: 617 STAIVRAIIGLSRSLRLAVTAEGVETEEQHRLLARERGLD-LQGYLLGRPDLPA 669 >UniRef50_D0J677 Diguanylate cyclase/phosphodiesterase n=2 Tax=Comamonas testosteroni RepID=D0J677_COMTE Length = 829 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 107/495 (21%), Positives = 190/495 (38%), Gaps = 17/495 (3%) Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---L 306 +F G + N Q ++ L L + Sbjct: 301 LFESEGGPVSDLLELAAARWDVGSFWEGNLWLKQSEGQRCAVWLSWVALRDGYGRLVQSI 360 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRID 358 +R ++ A +D LT LPN +L + + + S L +D Sbjct: 361 GFMRDMTMQRSAQKQIEQLAYSDALTGLPNRLSLSRHVQAAITAARFTQQPFSILFLDLD 420 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G ++ + + L L++ + L + G E +L L EG Sbjct: 421 RFKIINDSLGHDFGDRVLKLVAQRLSGLLRPADVLCRQGGDEFVLYLHDCTGEGASAVAA 480 Query: 419 NILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 IL+ + + G + +F + TL L+ Q + Sbjct: 481 RILDEMRQPFMLDGLGFSVQCSIGAAQFPADGLTLDELIRQADIAMYRVKERGRG-NFSF 539 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 + +S ++ L + +R ALD+G + ++ QP + + +L + G++ Sbjct: 540 YQPQMSAGLLSRMKLEHAMRQALDKGHMAVHFQPQVHIRSGRIVAAEALLRWTDPELGVI 599 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 +P F+PL + D VLE ++ A + SVN+ L Q + R+ Sbjct: 600 SPAAFIPLAEESGYVVALDAWVLEQSVQEAARWLAMDMPVKVSVNVSALEFRQPDFVDRL 659 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + + Q + LE+TE A+ + Q+ + G + IDDFGTGY++ LK Sbjct: 660 KYVLEASGLPAQWLELELTESILLQEAQEMALRVHQIAELGVGLVIDDFGTGYSSLAYLK 719 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 +L IKID FV+ + + D IV +I + +A + +VAE VETQ+Q + +L Sbjct: 720 KLPISKIKIDQSFVRGLPHDAGDKAIVGAIISMGQALGVELVAEGVETQEQCQAIEQLQG 779 Query: 714 QYLQGYLIGRPQPLA 728 Y QGYL P Sbjct: 780 DYFQGYLCSPALPAE 794 >UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2C3_NITSB Length = 765 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 103/447 (23%), Positives = 198/447 (44%), Gaps = 18/447 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKS 351 + S ++ + ++ A DPLT LPN + + A + + Sbjct: 310 NRSTTIIGIAIDVTEEIKAKKQVEFLAYNDPLTSLPNRVSFQDILEKLSKIAQRSKERFA 369 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L IDN +F++ YG + + I L ++ ++ ++++ G E ++++ ET+ Sbjct: 370 LIFLDIDNFKFVNDTYGHEIGDKLLIDIATILKETLRSSDLIFRIGGDEFVVLIPKVETK 429 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 L ++ + +++ + N + F + + ++ L ++ Sbjct: 430 DSLDIVLEKIKESVAKEYRYGNINFSVSCSLGIAIFPDDSDDIETLTRYADIAMYEAKKS 489 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALD-QGDLLLYAQPIRN---KEGEGYDEILA 524 + +E + +R AL + +L L+ QP + + G + ++ Sbjct: 490 GKNRFV-FFKEEMKKYLDHLQQTTQDLRKALKKEDELTLFFQPKIDIQNNKVIGAEALIR 548 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPL 582 G++TP+ F+P+ + +L + D V++ + L + + S+N+ Sbjct: 549 WNHPQKGLLTPNVFIPVAERSDLIEKIDEFVIKKSFRHLQEWSSDKELQNIVLSLNISAR 608 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + + K Y+I P + LEITE + N ++ +E + + GF++A+DDF Sbjct: 609 QFRNPKFLDFLDKNLKLYNIDPSKLELEITETLSMENVSHTVNMLEAIKQIGFQVALDDF 668 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKRL D IKID F+ DI + D I + ITD+A ++AE VET+ Sbjct: 669 GTGYSSLNYLKRLPFDTIKIDKSFIDDIDKDPEDYQITKIITDIAYTFRKEIIAEGVETK 728 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 QQ+ +L L Y QGYL +P PL + Sbjct: 729 QQERILKDLKCFYAQGYLYAKPLPLNE 755 >UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YLW9_MOBAS Length = 792 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 112/658 (17%), Positives = 207/658 (31%), Gaps = 32/658 (4%) Query: 96 VVLCACAILRWQLGTRWRYG----LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 +L A L G + + + G + + F + Sbjct: 117 FILGAWWGLAILTFYPSSDGDAKSVIAVIAMGMICGGGFALSALKRALQAFIIPLFVGSV 176 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK- 210 + F + LL V + L + + H I L + Sbjct: 177 VALGISQGTNDYFLLALLLGFTFIVYRASCARGELLQENLEGHQKLAEQSSIIELLLREF 236 Query: 211 -EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV 269 E + + L+ + G + + Sbjct: 237 EEGTSDWIWQTGHDGQLVRGGDRFSQIF---GRGTDRLIPNGDQTFAGQGLDLSPIAQPM 293 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQA 326 + + +A + + + RR A Sbjct: 294 LERTPFRETIIEIPSPQGAAWIAMTGKPIFGHDGAFTGYRGVASDITATTHAERRIAYLA 353 Query: 327 LTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT L N + + Q S L +DN + ++ G + +R Sbjct: 354 HHDSLTGLANRSWFAEEIDRICASPPPQGPTSSLLYLDLDNFKLINDRNGHLTGDQLLRQ 413 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDM 435 + LL +++ + + ++ G E +V + + + ++ Sbjct: 414 VAARLLRIVEPGDMVARIGGDEFAIVAHSAPDTASADSLATAILACFATPFSLGAELANV 473 Query: 436 GYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 G F G + LL ++ A E ++ + + L Sbjct: 474 GCSVGIA-FPGLDGANPDDLLRNADLALYEAKAAGKN-TFCFFESEMAQRLRDRHRLEYD 531 Query: 495 IRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R A+++ +L+L QPI + G++ ++ G + PD F+PL Q Sbjct: 532 LRCAVERNELVLNYQPIVDSRTRQTLGFEALVRWEHPLHGRVQPDHFIPLAEQTGAICGI 591 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + A+ +VN+ I + ++ + LEI Sbjct: 592 GAWVLREACRNAASW---GDHLTVAVNVSVDQFRHGTIMTDVEDALASSGLAADRLELEI 648 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + E+ + + +L G RIA+DDFGTGY++ L++ D +KID FV I Sbjct: 649 TESLFIDDPEAVVTVLHRLRSLGVRIALDDFGTGYSSLSYLRKFPFDKLKIDRSFVNAIK 708 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + I+ +I L + LSV AE VE +Q +L ++ QGY RP AD Sbjct: 709 DDRIAHGILETILALGRVLDLSVTAEGVEDAEQIDILTRMTCNQFQGYYFSRPMEAAD 766 >UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWY3_RHORT Length = 683 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 97/496 (19%), Positives = 188/496 (37%), Gaps = 19/496 (3%) Query: 252 TLGVGKLRYPFLNLTWAVSTLC-LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 L G L W + + + + L + ++ Sbjct: 184 ALATGYLHEGLARTLWEDLLCGRVWRNDVDLPTADGQRTHSRLTIIPLRRDDGAVDRLMT 243 Query: 311 IYHRSE-WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 + + + Q D LT LPN + + + + +D+ + Sbjct: 244 VIEPRSPATDSQAWQQVNHDTLTGLPNRVLFQDRLLTALASARRRNDQLAVLFVDLDHFK 303 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G ++ + L +++++ L ++ G E + L+G + + N + Sbjct: 304 TVNDSLGHSFGDQLLQQVATRLSQCLRDSDTLARMGGDEFTIALTGDGHQRDYAMIANRI 363 Query: 422 NS---RQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 R + +G F + E + LL ++ A A Sbjct: 364 LETLRRPFTLEGGHEVLIGSSIGITLFPNDAEDVDTLLRNADTAMYRAKASGRN-AFQFF 422 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 E ++ + + L N +R A+ DL ++ QP+ + + ++ D G + Sbjct: 423 TEEMNREIQSHLDLENALRRAVRAMDLTIHYQPVVDSATLAVVSAEALVRWPLADKGFIP 482 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ + L VL + K R SVN+ L + A R+ Sbjct: 483 PSRFIPVAEELGLIDEIGGWVLWNACTQAKVWQAQGAKAFRVSVNVSWRQLRNPDFALRV 542 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + + LEITE + + + L + G +AID+FG+G+++ + L+ Sbjct: 543 REALEGTGLGAAFLELEITEGMVLRDPQGIAPALMALSEMGVALAIDNFGSGHSSIKCLR 602 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + I+K+D V D++T+ DA++V + +A+ L+VVAE VET Q L + Sbjct: 603 QFPFSILKLDRSCVADVLTSHEDAVLVETAAIMARRLGLTVVAEGVETHAQLEFLREHYC 662 Query: 714 QYLQGYLIGRPQPLAD 729 +QGYL GRP P D Sbjct: 663 DLIQGYLFGRPLPPED 678 >UniRef50_Q3SJE6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJE6_THIDA Length = 758 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 99/434 (22%), Positives = 176/434 (40%), Gaps = 18/434 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAPE----QEAGKSFCCLRIDNLEFM 363 + E R + A D LT LPN A QA + + +D L+ + Sbjct: 302 VEQREQAQRHLNRLAYFDGLTRLPNREAFRLTLSQALRTLNGSGGRLALLFVDVDRLKNV 361 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G ++ I L +++ ++ L + G E ++++S + + + L + Sbjct: 362 NDGLGHRAGDMLLQQIAGRLQSVLRGHDHLSRFGGDEFVVIVSEIVRDTDAERVAGRLLA 421 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + T + G + + E+L LL Q+ Sbjct: 422 ALAAPVDIGGTQVYTGASIGIALYPEDAESLDGLLKHADTAMYQAKEQGGNR-YVFYHAQ 480 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + + +++ L +R AL++ +L+L+ QPI + G + ++ + G++ P Sbjct: 481 QTERAVERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLVMPSA 540 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRII 594 F+P L VLE+ L + SVN+ +++ + Sbjct: 541 FIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGRAADDLTLSVNISTRQFEGEHLTRAVD 600 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 R R + P + LEITE + ++ L G R+A+DDFGTGY++ L + Sbjct: 601 RALARSGLRPDCLELEITENVMLVMTDEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQ 660 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L +KID FV+ I + + IV +I LA+ + VVAE +ET QQ A L G + Sbjct: 661 LPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEGIETAQQYAFLRDRGCE 720 Query: 715 YLQGYLIGRPQPLA 728 + QG L+ PQ Sbjct: 721 FGQGNLMSTPQAAD 734 >UniRef50_Q3A5U6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5U6_PELCD Length = 628 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 92/434 (21%), Positives = 178/434 (41%), Gaps = 25/434 (5%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHY 367 + R H A D LT LPN + A ++ + + +++ + ++ Sbjct: 165 RQIQGRLHRLAYFDNLTGLPNRTQFLESLNKTLAIAQRKQKQAALLFIDLNDFKRINDTL 224 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKL---------YQLPGSELLLVLSGPETEGRLQHMV 418 G M + + + L ++E++ L +L G E ++L E+E + + Sbjct: 225 GHSMGDKLLEIVAKRLAGCIRESDLLGSTCEGSKTARLGGDEFTVLLPEVESEQFVATVA 284 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + +R + + + F + + + L+ + + Sbjct: 285 KRIFHCLTRPADLDKHQVMVTPSIGIALFPNDGKDAETLMKCADMAMYFAK-NREPENYR 343 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 +E ++ + K++ + +R AL + +L L QP + G + +L + G Sbjct: 344 FYQESMNTEALKRLAIETQLRHALQRQELSLVYQPQFDLNTGAVSGLEALLRWDNQELGQ 403 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAG 591 + P +F+ + + + V+ + + T D + PR SVN+ P + + Sbjct: 404 IPPKEFILIAEETGIIYDLGHWVMCTACNQVKTWHNMDIELPRISVNVSPKEFIHPDFLS 463 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + + P + +EITE + E + +E+L + G +IAIDDFG GY++ R Sbjct: 464 NVKTALDESGLEPGGLQIEITETLLMEHYEGTAKILEELSRMGVQIAIDDFGKGYSSLNR 523 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L L D +KID FV I + ++++I +A A +L V+AE VET+ Q L Sbjct: 524 LHTLTIDCLKIDRSFVNGISVGFKEQSVIKAIISMASAMNLKVIAEGVETENQFTFLKDK 583 Query: 712 GVQYLQGYLIGRPQ 725 Q QGY + P Sbjct: 584 HCQEAQGYRLSLPL 597 >UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=A8H0J8_SHEPA Length = 839 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 87/448 (19%), Positives = 168/448 (37%), Gaps = 17/448 (3%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------ 351 + + + + A DPLT LPN AL EQE ++ Sbjct: 382 IEHQIRFFVAVFNDISAQKQSEAELAKVAFHDPLTKLPNRMALNTGLEQELKQASHSNTR 441 Query: 352 --FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + +D + ++ YG + + + R + + +L E L+L + Sbjct: 442 LGLVYIDVDLFKQINESYGHPVGDEVLLEVSRRFSQSLGDLVTAARLGSDEFALLLPNID 501 Query: 410 TEGRLQHMV---NILNSRQIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + L + + + + + + + LL ++ Sbjct: 502 SNDALLQQINNLRKVFDQPFILGEHGQARLTSSMGVAIYPDDAQDPSGLLVNAEIAMHRA 561 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEI 522 E ++ ++ ++ L + + A++ L L QP + G++ + Sbjct: 562 KQDGRNNC-AFYTESLNQESVAKLKLQSALHDAIELNALYLVYQPKISFVTGDVVGFEAL 620 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMP 581 L G ++P F+PL + L VL+ + R +VN+ Sbjct: 621 LRWDDPAFGAVSPAVFIPLAEKIGLIQDIGRWVLKRACEQGQRWREQGVNFGRIAVNVAG 680 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + + + K+ + + LE+TE S E ++ +L G ++IDD Sbjct: 681 QQIQRSSFVDEVAETLKQTGLPASCLELEVTESYMMSEPELVSQDLAKLGLMGVELSIDD 740 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK+L +KID F+ + +T + I ++I + A +L VVAE VET Sbjct: 741 FGTGYSSLSYLKKLPIHKLKIDQSFIAGLPLDTHNTAIAKAIIAMGHALNLKVVAEGVET 800 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q Q L + QGY +P+ + + Sbjct: 801 QAQADFLKDNLCDHAQGYFYSKPKLVEE 828 >UniRef50_Q2N9U3 Sensory box/GGDEF family protein n=3 Tax=Sphingomonadales RepID=Q2N9U3_ERYLH Length = 909 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 124/718 (17%), Positives = 237/718 (33%), Gaps = 51/718 (7%) Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTR------- 111 + + ++P++ + + L S+L A + S F + + L + TR Sbjct: 76 WTFMALLPLVAAVVGSLLTQALPSYLAIAAFVSSALFFGIASKVSLWERSFTREVLSAAA 135 Query: 112 --WRYGLTSRYVWQRLFWLGLVT---PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 + ++ L ++ PI + + L + Sbjct: 136 AAVAVTVVPSLLYGLALGLWVLLGDLPIAAGVMGVISFNAISATLLTGRPRPMYACLAAS 195 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 L+L +F + Q R+ A ++R + Sbjct: 196 WAPLALMEGNPTNVTMFAVFAAGLAILSRYQAKIDRERAERRQTDERILNRAIDILRDYE 255 Query: 227 LLLLCTPYEND---FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-- 281 +E D + PV + T + P L F Sbjct: 256 ETGNGWFWETDRRGLLTYVSGPVANRLGTKAKRLIGRPITELFDLAHDNREGERTIAFHL 315 Query: 282 ------------LQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQA 326 G+E E + + A Sbjct: 316 SARSAFQELPVKAAGIEEERWWSISGRPIFDSFQNFCGFRGSGTDLTEKRRSQEHASRLA 375 Query: 327 LTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT L N + Q+ E+ + L +D + ++ G ++ Sbjct: 376 HFDSLTGLANRHQMSQSLEKILASPKVANRECAVFLLDLDRFKHVNDTLGHPAGDALLKQ 435 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDM 435 + L + ++ +L G E ++L G + +L ++ + S+ + + Sbjct: 436 VAERLESTVGNMGRVGRLGGDEFKVILPGRVPKDKLSYLAAGIIRSLSQPYSIEGQRVVI 495 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G N E+ + ++ + + ++ L + Sbjct: 496 GVSIGIAISPENGESSEDVIRNADLALYAAKDGGRGR-FHFYSNDLHSAAEERSQLERDL 554 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ +G L L+ QP+ + G++ +L G ++P KF+P+ L Sbjct: 555 REAISEGQLELHYQPVVQTATERIAGFEALLRWKHPQHGYISPAKFIPIAEDTGLIQAIG 614 Query: 553 LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 + + LA+ P K R +VN+ PL + + I + ++P + LEIT Sbjct: 615 EWAIRTACHDLASWP---KSIRCAVNVSPLQFSNEQLPTIITSALAQAGVAPTRLELEIT 671 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E ++ E + L G R+A+DDFGTGY++ LK + IKID FV+ Sbjct: 672 ESVFLNDDEGTDAMFAALSGIGVRLALDDFGTGYSSLGYLKTAPFNKIKIDQSFVRGATV 731 Query: 673 -NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + I+ SIT LA+ + AE VET + L+ G ++QGY+ +P A+ Sbjct: 732 PGSRNGAIIASITSLAQELGMDTTAEGVETLDELDLVRMHGCSHIQGYIYEKPLNKAE 789 >UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YPN8_9CYAN Length = 1177 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 90/472 (19%), Positives = 176/472 (37%), Gaps = 25/472 (5%) Query: 276 NYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 N+ + + + S + + + + A D L Sbjct: 693 NFESQVYRQDGRLIWILQNARAIRSSKGKQVIYYEGSIIDITNLKKTEEKLRYSASHDAL 752 Query: 332 TLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 T L N + + + L +D + ++ G M + I + Sbjct: 753 TNLWNRSFFIERLKKSITRLHKQSNYLFAVLFLDLDGFKIINDCLGHGMGDLLLIEISKR 812 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGA 439 L + L +L G E ++L Q + + + ++ + +G Sbjct: 813 LKISLHSGNILCRLGGDEFTILLENISDINEAQEIASRVLKILNKPFTLKGHQVFIGTSI 872 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + +L ++ A+ + + +++ + +R AL Sbjct: 873 GIVKGTREYHLPPEILRDADTAMYRAKKKGKGCAV-LFDAGMRTDALRRLQIQTDLRFAL 931 Query: 500 DQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +Q + LY QPI + G++ +L G ++P +F+P+ + + VL Sbjct: 932 EQEEFQLYYQPIIELSTGKIAGFEALLRWEHPQQGFISPGEFIPVAEETGIIVPLGEWVL 991 Query: 557 ESLLKWLATHPCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 + L T K SVNL +++ R+ ++ + H+ + + LEITE Sbjct: 992 REACRQLHTWKEKFSLSKLLMMSVNLSSQQFT-VDLSQRVDQILQETHVLGRELKLEITE 1050 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 ++ + ++ + +L + I IDDFGTGY + L + DI+KID FV + Sbjct: 1051 TAIMADPQLAIATLNELKQREIMICIDDFGTGYCSLGYLHQFPVDILKIDRSFVNKMQV- 1109 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 IVR I +LA++ + +AE +ET++Q L L +Y QGY +P Sbjct: 1110 GDKREIVRVIVELAESLRMDAIAEGIETEEQYIQLQNLHCKYGQGYYFAKPL 1161 >UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CH18_SHEPW Length = 1073 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 95/632 (15%), Positives = 215/632 (34%), Gaps = 31/632 (4%) Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 ++ LV + Y+ S I + + L Sbjct: 425 SLYISFLSGVLVFYMVFILGKYIANSLISSITTIVNDVEEMAKDPNLQ-LNIEIKGNDEL 483 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT--LSWLAALSVLLLLLCTPYEND 237 + L +M+ A+ ++ A + L T Y + Sbjct: 484 TQISTALNQMLSERMLARTSLQQASAVFEHSSEGIMVTNADNRIELVNPAFTKITGYTLE 543 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILA 296 + G V + F + W +++T + Y + Sbjct: 544 EVKGQKPSVL------SSNHHQPEFYSQLWHSITTTNHWEGEIWNKRKDGNVYPEYLSIT 597 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------- 346 + + + + + ++ D LT LPN + Sbjct: 598 AVENAQGQISQYIGLFLDVSNHKQYEQDLWYKSNYDSLTKLPNRHQFSSRLQHAIDGASQ 657 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + + +D +F++ +G ++ L ++ + + + G E +++ Sbjct: 658 TNSQVAVFFIDLDRFKFINELHGHAAGNEILKQSATRLESVLGPEDSIARFGGDEFVIIS 717 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + + L + + + ++ + + + ++ LL Sbjct: 718 PQHNAIETAEQLAHKLVDVLVQPLKLDAIESNISASVGIAFYPEDGQDIEMLLRNSETAM 777 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 Q+ ++ + +++ L +R A+ + + L QP+ + Sbjct: 778 YQAKRDGRAH-FQYFSPEMNVEMLERMQLEQRLRKAVKKSEFYLEYQPVVDMTHGTVSSV 836 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + ++ + GI++P F+P+ + L VL L L++ + ++N+ Sbjct: 837 EALIRWRDPEFGIISPALFIPIAEETGLIEPLGEWVLNQALADLSSWHAQGHMLKIAINV 896 Query: 580 MPLTLLQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 + N + R+ I+ V +EITE + S+ ++ + G Sbjct: 897 SGRQCINSNGLSFYQVLEEALLRHKIAAHYVHIEITESLLIEDKPYSLEILQSIRNLGVD 956 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I +DDFGTGY+ L + +IKID F+ + + DA +V++I + ++ +++VA Sbjct: 957 IYLDDFGTGYSALSYLNQFPISVIKIDKSFIDNATVSQSDAKLVKAIVMMGQSLEMTLVA 1016 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E +ET++Q L LG Y QGYL+ +P Sbjct: 1017 EGIETEEQWDFLQSLGCNYAQGYLMSKPLSSE 1048 >UniRef50_A2SJS2 Sensory box/response regulator n=3 Tax=Bacteria RepID=A2SJS2_METPP Length = 754 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 98/609 (16%), Positives = 206/609 (33%), Gaps = 41/609 (6%) Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 + A F SL L Y + + + +R Sbjct: 107 AYEAGATDFFVKSTQWSLLAGRLRYLLRSSRTRLELERSKSKLARAQDLARMGSFDWRRD 166 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + + + + L + + ++ + + L Sbjct: 167 RSGLLFSVEGLRVFGLGPGDHLGMRS-----LIRMVPAEHRQGCLSLLRDTLARSTVLAT 221 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 Q + A +V+ + A D LT L Sbjct: 222 DFPVQLIDGRQRVVHVEAEPEFNEHGNLTGYTGIVQDVTDRRVAEDKIRHLANFDALTGL 281 Query: 335 PNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN R A+EQA + +D + ++ G + + R L Sbjct: 282 PNRRQLIWRAERAMEQAKRLNHQVGLLLIDLDRFKVINDTLGHGAGDELLMEVSRRLRSC 341 Query: 387 MQENE-------------------KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---R 424 ++ ++ + +L G E + +L + + + + + Sbjct: 342 VRHSDQVVETGIDSVGLRAHRSLEAVGRLGGDEFVALLPEVDADQDAERVALRILEVMRE 401 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 I + F + ++ +L + A A ++G+ Sbjct: 402 PIFVGGQECFVTASVGIALFPRDGASVADVLRNADVAMYSAKAAGRNAA-SLYRPHLAGK 460 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 +++ L + + A+++ +L+L+ QP + G + ++ + +G ++ P F+PL Sbjct: 461 GREKLELESALHKAIEREELVLHYQPKIDVRTARMVGAEALMRWKR-NGVLVPPGDFIPL 519 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L + + +VNL + ++ I + + Sbjct: 520 AEETGLIVPMSEWAIREATRQARLWQQHHGIDTSIAVNLPSRLFERTDLVTHIQQAAAAH 579 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 ++ + LEITE + ++ + + +L++ G I+IDDFGTGY++ L L + Sbjct: 580 GVTHSCIELEITETGLMKDLQNVIPALHRLNEIGVEISIDDFGTGYSSLAYLTTLPISEL 639 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+D+ + +V +I LA++ + V+AE VE +Q +LH+LG +QG+L Sbjct: 640 KIDRSFVRDLGVTLQSSAVVTAIIALARSLGIRVIAEGVENLRQMEVLHRLGCSTMQGFL 699 Query: 721 IGRPQPLAD 729 + P D Sbjct: 700 FSKALPPED 708 >UniRef50_C0GP21 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GP21_9DELT Length = 721 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 95/556 (17%), Positives = 209/556 (37%), Gaps = 29/556 (5%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLL----LLLCTPYENDFIAGYLVPVFFIIF 251 + L + EK+ TL + ++LL L T +F + Sbjct: 144 LEELVEKRTRQLQESEKKYRTLFETSKSAMLLVDTESGLLTMANKEFCDLIGYTRQEVEN 203 Query: 252 TLGVGKLRYP--------FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 +L +P + + + + + L E + L + +A + ++ Sbjct: 204 SLHFLNFVHPDDHERARKYFDTSRQDAGTAPAEFEIKGLTREEKKLHLYYKVAAIPEWNS 263 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QEAGKSFCC 354 ++ + + + + LT LPN + + Q + Sbjct: 264 LVISIF-DLTDKRRVEEELRQRTFYNSLTGLPNSELFKNRLKKSIQTRQEDQGYFFAVIF 322 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G I + + L +++ + + G + L++ + Sbjct: 323 IDLDRFKLVNDSLGHQKGDELISLMAKRLERGVKKRDTVAHFGGDDFGLLIEAEDLPEAA 382 Query: 415 QHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 I + + + + + ++ + Sbjct: 383 LRAEKIKDQFVEPFEIAGNEIYTTCSMGIVVSSQDYSEPEEIFRDADTALHRAKSTG-PG 441 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + + Q + + L +R A+ Q + +LY QPI + G++ ++ + + Sbjct: 442 NYVVFDPQMHAQVSDLLQLETELRKAIQQKEFVLYYQPIYNLADLRITGFEALIRWIHPE 501 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G++ P+ F+P+ + L +L++ + + ++NL + KN+ Sbjct: 502 KGMVPPNVFIPIAEETELINPLGEWILDTACRQARKWNKGGRELTMNINLSGVQFKDKNL 561 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + F++ ISP + LE+TE +AE S+ + ++ K G R++IDDFGTGY++ Sbjct: 562 INVLENTFRKNSISPLHINLELTESVVMGDAEESINTLNKIKKLGARLSIDDFGTGYSSL 621 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L++ D +KID F+ + T + +VR+I + ++ + VAE +ET +Q LL Sbjct: 622 NYLQKFPIDNLKIDRSFINTMETQSG-QELVRAILAMTQSLGIKAVAEGIETWEQVKLLQ 680 Query: 710 KLGVQYLQGYLIGRPQ 725 +L QGY +P Sbjct: 681 ELNCNLGQGYHFSKPL 696 >UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7N9_AZOSB Length = 889 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 171/442 (38%), Gaps = 19/442 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 + + + R A D LT LPN A+ A + Sbjct: 439 HYVAVFTDISQLRQFEERVSHLANYDLLTDLPNRLRMSDCLETAIAAARRSHTQVGVMLV 498 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + L ++ + L + G E LLVL G Sbjct: 499 DLDRFKNVNDALGHALGDELLAGVAERLRKHLRHGDTLGRYGGDEFLLVLEQLRDAGEAA 558 Query: 416 HMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + +NS + L + + + +T L+ ++ Sbjct: 559 AVARTMNSALDQPFLMRGGQELYIKASIGISLYPEDGDTAAELIKDADAAMYEAKRLGRN 618 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 +E ++ +++ L + +R ALD+ +Y QP+ + E G + ++ L+ Sbjct: 619 -TFRYYQEDLTRTANERLALESRLRRALDESMFEMYYQPLVALNSGEVLGAEALVR-LRP 676 Query: 529 DGGI-MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQ 586 DGG + P F+P++ + + A V + + + ++NL + + Sbjct: 677 DGGPRIGPADFIPVLEESGMIAELGRWVQREVCRQGRAWLDAGYDFQLLTLNLSAEEVRR 736 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + + + + +EITE ++ + +L G R++IDDFGTGY Sbjct: 737 GGVVDNLREVLAETGFPAEKLEVEITESGLMQRGSEALDFLYELKGLGVRLSIDDFGTGY 796 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK + +KID F+ DI + D + +I LA+ L V+AE VET+ Q+ Sbjct: 797 SSLSYLKLFPVNKLKIDRGFITDIPEDQNDVQLTTTIIALARNLGLDVLAEGVETEAQRT 856 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L + G QGYL P A Sbjct: 857 FLAEKGCDAYQGYLCSPPVEAA 878 >UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q6I3_CATAD Length = 750 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 88/472 (18%), Positives = 176/472 (37%), Gaps = 20/472 (4%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 ++ ++ V +L + + + QA+ DPLT L N Sbjct: 272 HDLVLAGTRRFFHTRLVPERDATGTVVSVLTVSHDLTDRKRIEDALAEQAVRDPLTHLAN 331 Query: 337 FRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L +Q + L +D + ++ G + + L ++ Sbjct: 332 RALLVDRIDQALAKMRVQGGRLAVLFLDLDRFKVVNDSLGHAAGDALLVATAARLRSAVR 391 Query: 389 EN-EKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 + + + + G E +++ + + + S + + + Sbjct: 392 QGSDLVARFGGDEFVILCEHVQGRKDAADVARRVTRALSAPFERDGQPIHISASIGIAVT 451 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVL-ALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 T LL + A +H + ++ V + ++ L +R A+++ + Sbjct: 452 SDPMTTADELLRDADAAMFRVKARNHGSGSYIFFDDSVREEAVSRLWLEGELRRAIEEKE 511 Query: 504 LLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L +P +R+++ G + ++ + G++ P F+ + +L VL Sbjct: 512 FRLVYEPVYNLRDRQIIGMEALIRWQHPERGLLPPSTFIEIAEDCDLIVPIGRWVLHEAC 571 Query: 561 KWLATHPC----DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 LA K +VNL P L + + + + + P+ + LE+TE Sbjct: 572 GQLAVWNRRRDPGKPPLTMAVNLSPRQLNDEGLVAEVANALRGSGLEPEQLTLEVTETAV 631 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + + + Q+ G +IA+DDFGTGY++ L+R+ A+ +KID FV + D Sbjct: 632 HEAPQFAQAVLSQVSDLGVQIALDDFGTGYSSLGHLRRIPANALKIDRAFVNGLEHKGGD 691 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV ++ +A A + V E +E++ Q L LG QGYL P A Sbjct: 692 TAIVTAVVTMAHALGMITVGEGIESEAQYEYLRALGCDQGQGYLFAEPVSAA 743 >UniRef50_Q8DHT6 Tll1859 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DHT6_THEEB Length = 712 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 90/450 (20%), Positives = 172/450 (38%), Gaps = 18/450 (4%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK-- 350 +L + + + + + L D LT L N L EQ A Sbjct: 249 LVLRDVHGNATRVAGSLTDLTEHRLGEAQLLHDGLHDWLTGLANRTLLFDRIEQAARHGR 308 Query: 351 -------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + ID + ++ G + + L +++ ++ + ++ G E ++ Sbjct: 309 RRPDYKLAILFIDIDRFKVINDSLGHSSGDLILIELANRLTRIVRADDTVARIGGDEFVI 368 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L + + ++S N+ + + + E + L Sbjct: 369 LLDDISDNNDALAVCDRIHSELDKPFVVNDQPIALRVSIGVALRSAHIEKAENYLRNADI 428 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 ++ E + ++ L +R A+++ + L QPI + Sbjct: 429 AMYRAKLAGGNR-YQVFSEDMHLMARDRLSLEIGLRQAIERDEFTLLYQPIYRLRDNALY 487 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRF 575 G++ ++ G + PD+F+PL + L V+ + L Sbjct: 488 GFEALIRWQHPTQGFLLPDRFIPLAEETGLILPIGDWVIWRACRDLQYWHEQFPQCQLSV 547 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL L+ + +++ ++ I P + LE+TE + + +L G Sbjct: 548 NVNLSNRQLMHPALPEQVLAALEQTQIPPHCLHLEMTESVGIDQPDQVRETLCKLKAQGI 607 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++++DDFGTGY++ L L DI+K+D FVK I +++ +I LAK +L VV Sbjct: 608 KLSLDDFGTGYSSLRYLTHLPIDILKVDRSFVKLITETEQRPLVIDAIVSLAKGLALEVV 667 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 AE VE Q L +LG Y+QGY RP Sbjct: 668 AEGVEHPYQVTRLRELGCDYVQGYYFSRPL 697 >UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MBY4_DIAST Length = 790 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 108/494 (21%), Positives = 189/494 (38%), Gaps = 21/494 (4%) Query: 256 GKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRI 311 G+ F W + + + L+ + + M Sbjct: 285 GRHGPAFYEAMWDTMRQTGHWQGEIWNRRKNGEVFPERMSLSAVRGADGAVTHYVCMFTD 344 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFM 363 + ++R A DPLT LPN QA + + L +D + + Sbjct: 345 ISEEKAQHQRLEFLAHCDPLTGLPNRAWFGEQLDSAVRQAQDSGEQMALLLLNLDRFKDV 404 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + YG + +R I R + ++ + L +L G E+ ++ + L + Sbjct: 405 NDSYGHAVGDEVLRHITRQVEQSLRPGDLLGRLAGDEIAVLARHLRHADGAAAVARHLIA 464 Query: 424 RQ----IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + +G F + T + LL + A A +E Sbjct: 465 AASTPWCTPDGIQVVVGVSVGICMFPAHARTTEALLQGAHSSVYGAKARGRG-AYCFFDE 523 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + +++ + +R AL QG L LY QP G + ++ L G+++P Sbjct: 524 SLIQAARERLEIEARLRVALAQGHLRLYYQPQVCIVTGRIMGAEALVRWLDPQEGMISPA 583 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ + V+ + + D R ++NL P ++A Sbjct: 584 RFIPVAETSGVIGPLGQWVMRAACEQGQRWRADGLPEIRLAINLSPRQFQLTDVAACAAE 643 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 K + + LE+TE + +++L + G R+A+DDFGTGY++ LKR Sbjct: 644 ALKASGFPARCLELELTESVLAERPDEIRAVLQRLQQLGVRMAVDDFGTGYSSLAHLKRF 703 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D++KID F++DI + D I +I + + LSV+AE VET QQ A L + G Sbjct: 704 PIDVLKIDQGFIRDIPRSADDMAISAAIVAMGHSLGLSVLAEGVETPQQLAFLRERGCDA 763 Query: 716 LQGYLIGRPQPLAD 729 QGYL RP P + Sbjct: 764 YQGYLCSRPLPAEE 777 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 100/430 (23%), Positives = 182/430 (42%), Gaps = 17/430 (3%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRH 366 + + A D LT L N L +++ ++ L +D + ++ Sbjct: 231 RAAAESQLNQLAYFDTLTGLANRSLLLKSLNETLKESQSEQYPGVLFYLDLDRFKTINDS 290 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSR 424 G + + +R+I + L +Q E ++ G E +++ E +L S Sbjct: 291 LGHTIGDNLMRTIAKRLEAWLQPGEIAARIGGDEFAILIPKLNKEDAANKAKQLLTLISN 350 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 ++ L F + +L Q ++ E + Q Sbjct: 351 PYSIDDHQLYCTVSIGISTFADKGISSIDVLRQADTALYRAKVAGRNK-YMFYEPEMQAQ 409 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLI 542 + + + AL +G L LY QP N + G + ++ + G++ P F+P+ Sbjct: 410 VESFLEIEKGLHEALHKGQLELYYQPQVNAQQQIIGVEALIRWNHPEKGVLPPGVFMPIA 469 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGP----RFSVNLMPLTLLQKNIAGRIIRLFK 598 + + ++E A ++ P R ++N+ PL + I K Sbjct: 470 EETGQILQIGDWIIEQACFQYAQWKKEQVLPETFHRLAINISPLQFSKNAFVEHITHALK 529 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + +I+ + + LEITE N ES++ + +L + +I+IDDFGTGY++ LK L D Sbjct: 530 QANITGEHIELEITESLLLENVESAINKMAELKELDLKISIDDFGTGYSSLRYLKHLAVD 589 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 ++KID FV + + D IV +I +A+ SL V+AE VET+++ L +LG + QG Sbjct: 590 VLKIDRSFVTQLHLDQSDQAIVSTIIMIAERLSLEVIAEGVETEEEFNTLVELGCEQFQG 649 Query: 719 YLIGRPQPLA 728 YL G+P P+ Sbjct: 650 YLFGKPLPVE 659 >UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=Q6LQD7_PHOPR Length = 1053 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 96/482 (19%), Positives = 182/482 (37%), Gaps = 15/482 (3%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 A T+ + + V E + + + + Sbjct: 554 IRQQLKAGRTINRVITRKKSDNTVCYEDETISPIRNDTGKISHYISTGKDITERVLFESK 613 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQEAGKS-------FCC-LRIDNLEFMSRHYGLMMRV 373 H A D LT LPN L Q EQ + + +D + ++ G + Sbjct: 614 LHKLAHYDLLTELPNRLLLLQHIEQAITNAEEMKTSVVVFNIDLDYFKKINDSLGHDVGD 673 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNN 430 + +I + + +++ + L +L G E +++ + + + + + + Sbjct: 674 KVLITIAKRITRSLRDEDVLARLGGDEFAILIQSDTSSQSIATLAERIINNICASLSIEE 733 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 L + + N LL + + ++ +++ Sbjct: 734 KSLSITASMGIAVYPENSVDSDALLKNSDIALYHAKDQGRNR-YCFFTPQMGIESVQRLQ 792 Query: 491 LLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L + +R +L + QP N + G + +L +G I +P +P++ L Sbjct: 793 LESDLRKSLGTDQYTFFYQPKVNAKTHKVCGIEALLRWKNEEGQIQSPLGIIPILENSGL 852 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 ++ + LA + F++N+ LL +I + + +P + Sbjct: 853 IVNVGETLINQACEQLAIWQSNGLDLHFALNISARQLLHSDIVDTVYKAVTMSGCNPHYL 912 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE ++ + + + +L G +IAIDDFGTGY++ L R I+K+D FV Sbjct: 913 ELEITESVVMADVKLAFDKLIKLEALGVKIAIDDFGTGYSSLAYLSRFPIHILKVDREFV 972 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +D+ N I RSI +LA + VVAE VE + Q L +GV+ QGY G+P P+ Sbjct: 973 QDLPMNKDSVTITRSIIELAHNLGMLVVAEGVENEGQIKFLTGIGVEEFQGYYFGKPMPI 1032 Query: 728 AD 729 + Sbjct: 1033 DE 1034 >UniRef50_C3KQA4 Putative uncharacterized protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KQA4_RHISN Length = 1105 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 94/553 (16%), Positives = 194/553 (35%), Gaps = 33/553 (5%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI------IFTLGV 255 + A + L + +++ + +++ + + + + + Sbjct: 518 AEAARLHAERLAERLSGVLESTMDSVVVADRDWRIEYLNSKAMRLLQVDEQAVGLDLWRL 577 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 + + + + E L A R Sbjct: 578 FPVNDSSVFAVEYRKVMSEHSSTTFEAYLEGLERWLEVHAAPTFEGISLF---FRDITER 634 Query: 316 EWLN-------RRWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLE 361 R+ H A D +T LPN + L +A E+ + + L +D + Sbjct: 635 HKAEQERLLAHRQIHHMARHDAVTGLPNRQFLREAFERLFEGTRARSKTAVLSLDLDGFK 694 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ YG +RS+ L ++ + + +L G E +++ +G E + + Sbjct: 695 AVNDAYGHPTGDLLLRSVAERLRRCVEGGDTVARLGGDEFVILRTGVRQEEEAIDLSQRI 754 Query: 422 NSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + D+G + L+ ++ A + E Sbjct: 755 IDALGAPYELDGVQADIGVRVGIAFSPRDGRAADQLIKAADIALYRAKARGRGTYIQF-E 813 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTP 535 + + + +R AL +L L+ QP+ N + ++ + G ++P Sbjct: 814 PGMDAHLQARQQMKVELRRALANDELELHYQPLVNLRTGLIATCEALVRWNHPEKGAISP 873 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+PL + L +L P +VNL PL + + + Sbjct: 874 VDFIPLAEETGLIVPLGEWILRRACAEAVQWPQQ---VSVAVNLSPLQFRSRRLVSVVRD 930 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 K + + +E+TE +++++ ++ + + G +IA+DDFGTGY++ L+ Sbjct: 931 TLKESGLDASRLQIEVTESVLLDESDNNLRVLQDIRRLGVKIAMDDFGTGYSSLGYLRTF 990 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IK+D F+ D+ T I+R++ + + ++ E VETQ Q ++H G Sbjct: 991 AFDKIKVDRGFISDLPTGKESLAIIRAVAGIGRTLGITTAVEGVETQTQLDVIHAEGFDE 1050 Query: 716 LQGYLIGRPQPLA 728 QGYL RP A Sbjct: 1051 AQGYLFARPLTAA 1063 >UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7J2_BACCO Length = 559 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 98/457 (21%), Positives = 181/457 (39%), Gaps = 22/457 (4%) Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT--DPLTLLPNFRALEQAPEQEA 348 + ++ ++ + R R DPLT L N AL ++ Sbjct: 100 ILHTSLAGMNGGEWVIAITRDVTALLDGERMLPDARTYQLDPLTGLWNRHALLDRLNRKT 159 Query: 349 --------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK-LYQLPGS 399 + + +D ++ + G + ++ I L + ++ +Y+ G Sbjct: 160 AEAKKGAPHPAVLYIDLDRFKYFNDILGQHVGDEILKRIAIRLKQ-LPFSDYEVYRQGGD 218 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +++ +G E ++ M + + + F + E + L+ Sbjct: 219 EFIVLTAGCSREE-VKQMAEQILALFYDPFKIEGEDYFLTPSVGISLFPEDGEDGETLIK 277 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---N 513 + L + + +L+ +R A+++ +L ++ QP Sbjct: 278 HADTALFKVKERGKGHFL-FYSKKMDADFHNYILMEAHLRRAIEKNELAVHYQPQVQLDT 336 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KG 572 + + ++ +L G + P KF+PL + L V++ + +A G Sbjct: 337 GKIKSFEALLRWRNPKFGNVPPLKFIPLAEETGLITSIGAWVIDHVCAQIAQWRQKGWAG 396 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VN+ P L +AG I R ++Y + + +EITE A + + + L + Sbjct: 397 FRVAVNISPKQFLDPGLAGLIGRTLEKYKLPASVLEIEITEG-AMEDKGHILKVLSSLKE 455 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G I++DDFGTGY++ LK+ DI+KID FV+++ + DA I ++I LA L Sbjct: 456 MGLTISVDDFGTGYSSLNYLKKFPVDILKIDQSFVRELENSQKDAAITKTIIHLAHQLGL 515 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE VE Q Q L Q QGY RP P + Sbjct: 516 EVVAEGVEEQGQVEFLQSARCQKAQGYFFSRPVPAEE 552 >UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Bacillus sp. SG-1 RepID=A6CIZ8_9BACI Length = 988 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 184/442 (41%), Gaps = 18/442 (4%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 V + ++ + + + A D LT LPN R EQ ++ Sbjct: 384 VRIEGILSDITEQKEAEEKVNYIAHHDYLTDLPNRRKFEQELQKFIEQSKMANQEFGVMY 443 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G + + I LL + +N+ + ++ G E +++ + + Sbjct: 444 IDMDGFKRVNDTLGHAIGDKLLVEISTRLLDCVPQNDFVARIGGDEFSVLIDKMHSLEQS 503 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + L + + + Q +L + ++ Sbjct: 504 TTIAKKIVAALEVPYKIHGYELFVTASVGVAAYPQDGHDAQTILQKADKALYRAKEMGKN 563 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKY 528 ++ + K L N +R A+ +L + QP + + G + ++ Sbjct: 564 -NYQIYNSSMNIEAYKLYSLENDLRRAVKNKELYFHYQPKVDAQTEKLVGAEALIRWEHP 622 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + G ++P +F+PL + +L + +++ + S+N+ P ++ Sbjct: 623 EWGQVSPAEFIPLAEENDLIFKVTSWTFQTICTQIKNWTDRNLPLVPISINVSPKIFIKN 682 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 +I + ++ P+ + LEITE+ N ES IE+L + G +I++DDFGTGY+ Sbjct: 683 EWQEELIYIINNSNVDPRLIELEITEQALIKNEESFSAGIEKLKQLGVKISLDDFGTGYS 742 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ + D +KID FV DI+ I ++I ++A ++V+AE VET+ QQ+ Sbjct: 743 SLLYLKKFKLDTVKIDKSFVDDILKGK--PTITKAIINMAHEFDMTVIAEGVETRAQQSF 800 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L K +QGYL +P D Sbjct: 801 LQKQDCDQIQGYLYSKPILPED 822 >UniRef50_B1KF16 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KF16_SHEWM Length = 583 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 97/445 (21%), Positives = 172/445 (38%), Gaps = 20/445 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKSFC 353 ++ + A D LT + N R L + Q + Sbjct: 130 GQFAGFAGIITDITERIVAENKITFMAYHDALTGVANRRLLMEHLAQELTKPCGHCSALL 189 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLSGPETEG 412 + +DN + ++ HYG + + + L Q E + + ++ G E +L LS Sbjct: 190 YIDLDNFKQVNDHYGHTVGDLLLCEVSDVLSEYAQDEEDLVARMGGDEFILFLSNLGENS 249 Query: 413 R--------LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + S + + + D + + Sbjct: 250 ALVTQKLVQITEKIRVQLSEPVLLGKLKIQITSSIGVVTLDHATMSHSDIFKYADAALYH 309 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDE 521 S +E + ++ L + + A+ + LLY QP + EG + Sbjct: 310 SKNTGKNQV-RFYDEELEQSERRRHQLEDELSQAITNEEFLLYYQPQVDAEGTTILKAEV 368 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLM 580 +L GI+ PD+F+P + ++ L +LE + L K S+N+ Sbjct: 369 LLRWQHPRHGIVNPDEFIPHLEEYGLIIPVGKWILEESCRQLKVWHNAGKHELCLSINVS 428 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + I ++ IS + + LE+TE A + S++ +++L + G RIA+D Sbjct: 429 ANQFKHPDFIEFIEICLIKHQISGEQIELELTEGVAIHDIPSTIKKMDRLQELGIRIALD 488 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK L + +KID FV+ + + DA IV + +A L+VVAE VE Sbjct: 489 DFGTGYSSLSYLKHLPINTLKIDQSFVQGLPHDGYDAAIVETTMVMAHHLGLTVVAEGVE 548 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ 725 + Q A L K QG+L +P Sbjct: 549 NRVQLAFLKKQQCHLYQGFLFSQPL 573 >UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax=Gammaproteobacteria RepID=Q47Z22_COLP3 Length = 1206 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 100/467 (21%), Positives = 190/467 (40%), Gaps = 21/467 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y++ ++ + + + + + + A D LT LPN Sbjct: 725 RKNGEVYAVMQTISAVRDVHGIATHYVSLGNDITLMKEHQNQLEHIAHFDILTNLPNRVL 784 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + L +D + ++ +G + + ++ + ++EN+ Sbjct: 785 LADRLSQAMLQCSRHKQSLAVVFLDLDGFKHVNDTHGHDIGDELLIALSVRMKEALREND 844 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 L ++ G E + VL+ T + ++ L S + ++N L++ + + Sbjct: 845 SLARIGGDEFVAVLADLTTVEDCEPVLERLLLAASEPVIFDNIVLNISASIGVTLYPQDN 904 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L+ + ++ L IR+ALD +L+ Sbjct: 905 VGADLLMRHADQAMYVAKESGKNRYHLFDTAQDDAVKVQRESLE-AIRSALDNHQFVLHY 963 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N G + ++ G++ P +FLP+I +S V+++ L ++ Sbjct: 964 QPKVNMRKGIVTGVEALIRWQHPKRGLLNPIEFLPVIENNPMSIEMGEWVIDTALTQISQ 1023 Query: 566 HPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAES 622 SVN+ L L Q + R++ L + + P + LE+ E A + + Sbjct: 1024 WQKLGLNFPVSISVNIAALQLQQPDFTDRLMILLAAHPDVEPHYLELEVLETSALEDVYN 1083 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + G A+DDFGTGY++ L+RL A++IKID FV+D++ ++ D IV Sbjct: 1084 VSTIMNACMALGVNFALDDFGTGYSSLTYLRRLPANLIKIDQSFVRDMLHDSDDLAIVEG 1143 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + LAK+ V+AE VET + L +LG + QGY I RP P ++ Sbjct: 1144 VIALAKSFKRDVIAEGVETIEHGTALLQLGCELAQGYGIARPMPASE 1190 >UniRef50_C1I4R6 Diguanylate cyclase/phosphodiesterase domain 2 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4R6_9CLOT Length = 960 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 89/439 (20%), Positives = 172/439 (39%), Gaps = 16/439 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSF--------CCLR 356 + + + + A D LT LPN + E + + Sbjct: 516 ISGSISDITERKKAEEKIETLAFYDQLTGLPNKHMFLDKIDDELLRGLKNEYIGVAFLID 575 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 IDN + ++ G ++ I + + L+ +E + +L G E L+++ + + Sbjct: 576 IDNFKNINDTLGHDYGDEFLKCIAKEFIKLLDNDEFICKLDGDEFLILMLDVNGKAEAEE 635 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 M N + + + LL ++ + Sbjct: 636 MANKILELFKNPFKVKEKNIFTSVSIGISIIPNDARNKSELLKNSDIAMYKAKENGKNR- 694 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 E ++ ++ L++ +R A+ + + L QP + + G + +L Sbjct: 695 YLFYRESMAKDIVRKSQLIDGLRNAICKSEFELLYQPQINMNDSKVIGAEALLRWRSNSF 754 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G ++P +F+PL Q L VL++ +VN+ + L Q N Sbjct: 755 GNVSPIEFIPLAEQSELIISIGKWVLKNACIKNKEWIDKGITPMTIAVNVSVIQLYQSNF 814 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + + + + + +EITE +N E ++ + + G +IA+DDFGTGY++ Sbjct: 815 LNTVRDILDESGLPAEYLEIEITESIVMNNIEENLKVLNDIKDLGVKIALDDFGTGYSSL 874 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+ L D +K+D F+ +I + D +IV I LA ++ VVAE VE ++Q +L+ Sbjct: 875 SYLRLLPIDKLKLDKSFIDNIHISENDRVIVECIIKLAHEMNILVVAEGVEIKEQFDILY 934 Query: 710 KLGVQYLQGYLIGRPQPLA 728 K+G +QGY +P Sbjct: 935 KMGCDRIQGYYFSKPISPD 953 >UniRef50_B3E7G7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E7G7_GEOLS Length = 860 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 93/464 (20%), Positives = 172/464 (37%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + Y +A + + + + QA D LT L N Sbjct: 382 RKNGSLYWDLCSIAPIRNEAGEITNFVAIKEDITSRKAQEEILTWQAGHDTLTGLYNRYF 441 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 LE Q S + IDNL+F++ +G + I L Sbjct: 442 LENHLTAEIKRMDRQHQTLSLLLIDIDNLKFVNDTFGHDFGDRLLVQIAERLKQAACPLS 501 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQ 448 + + G+E LV E +VN + + + + + F + Sbjct: 502 IVGRFLGNEFALVPPLAEGREHAVTLVNRIKQQMSELFVMDGAEVVITVSIGVVVFPDDG 561 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 E LL ++ + + +++L + A + D L Sbjct: 562 EDADTLLRNAEAAMYEAKRQGRN-TIVWYTTDFHKRAQYRLMLAARLHRAFENSDFTLQY 620 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L D ++P +F+P++ + L VL A Sbjct: 621 QPQISTQDNTVIGVEALLRWTPADLPPVSPMEFIPILEETGLIVPVGTWVLYQACHQAAA 680 Query: 566 HPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R SVN+ + + ++ + + + P + LE+TE + S Sbjct: 681 WQRAGLPRMRLSVNISAVQFQRGDLGETVRMVLAETGLDPALLCLELTESMLMIDTAQSQ 740 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +++L G R+A+DDFGTGY++ L RL +K+D FV+ + D +V ++ Sbjct: 741 QKLQELRDLGVRLALDDFGTGYSSLAYLSRLPVQELKVDQSFVRRLHDTPSDTAVVNTVI 800 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+ L+++AE VE+++Q++ L G +QG+L RP P Sbjct: 801 AMAQELGLTLIAEGVESEEQKSHLIGRGCTIIQGFLFCRPLPPD 844 >UniRef50_Q3IEF5 Putative uncharacterized protein n=3 Tax=Alteromonadales RepID=Q3IEF5_PSEHT Length = 751 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 87/455 (19%), Positives = 171/455 (37%), Gaps = 17/455 (3%) Query: 289 YSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + + + + + + + + H + D T LPN + Sbjct: 273 LPIEISIDEIRNDQNQITNYVVVYSDLTERKKAESQLHNLSNRDRTTNLPNRNLFFTDLQ 332 Query: 346 Q----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + + +DN + ++ G + + + L L +EN+ Y+L G E Sbjct: 333 KLGQLNSHHALLVFDLDNFKKINDSLGHQLGDSLLAKLAMRLNKLTRENDVFYRLGGDEF 392 Query: 402 LLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 LV+S + + L + F + T + LL Sbjct: 393 ALVMSDTNDIYTITRTAKQFLAAIATPFKMAGHELAITSSVGIVLFPEDGNTPELLLKNA 452 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 + + + ++ + K++ + N +R L + +Y QP N + Sbjct: 453 DTAMYHAKKKG--NSYLFFNDTMNREAVKRLQIENLMRFGLKENHFAVYYQPKMNIHTGK 510 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPR 574 G + ++ + GI++P F+P+ + VL + + R Sbjct: 511 LVGMEALVRFITPKKGIISPGVFIPIAEETGQIIEIGEVVLNKACRDVKEWLDAGLFNGR 570 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VNL ++ RI + ++ + + LEITE + + ++ + L G Sbjct: 571 VAVNLSAKQFSLPDLTTRIDVILQKNALPSYFLELEITEGTVMDDPKDAIAIMCSLSARG 630 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +A+DDFGTGY++ LK+ + +K+D F+ D+ N +V SI +A L V Sbjct: 631 IHLAMDDFGTGYSSLAYLKQFPLNTLKVDKAFIDDM-KNERGRNMVDSIVTIAHNLDLHV 689 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VE Q +L +L + +QGY +P + Sbjct: 690 VAEGVEQASQIEILKQLNCETVQGYYYSKPLSKDE 724 >UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31MH3_SYNE7 Length = 1238 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 109/562 (19%), Positives = 216/562 (38%), Gaps = 34/562 (6%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL-GVGKL 258 + A E+ L + + +++ + D Y+ P F I + Sbjct: 666 MQDISAIVAANEQLRLWLRAIESTGNSIIIADA-QQPDMPIIYVNPAFEKITGFSAAEVI 724 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFL-------------QGVETEYSLAFILAVLI---SFS 302 F L + L + L + + + LA + Sbjct: 725 GRNFRFLQGLETQQAELEEMRRALEEGTYCEVTLRSYRKDGSLFWNQISLAPVRDQKGHL 784 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 ++ S+ QA D LT LPN +Q + + Sbjct: 785 THMVASQTDVSESKAFEEMLLQQATHDALTGLPNRLLFLDRLDQAAARARGGGSPIAVLF 844 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +DN + ++ + ++ L +QE+E + +L E +++L + + + Sbjct: 845 IDLDNFKAINDGFSHSEGDAVLQIAAGRLQQCIQEHETVARLSSDEFVILLIDLDVQSKA 904 Query: 415 ---QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 M+ L ++ +++ F + ++ LL + Sbjct: 905 RVKAAMIQSLMAKPFEVMGNPIELTASIGVATFPHDGQSGSELLQAADLAVCAAKQQGKN 964 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 L S E + Q ++ + +R AL L LY QP + G++ ++ Sbjct: 965 L-WCSFSEAMREQLRSRIDIEKDLRQALIDNSLELYFQPQVDLVTHRLLGFETLVRWNHP 1023 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQK 587 + G++ P +F+P+ + +L L V+ + L S N+ +++ Sbjct: 1024 ERGLVAPGEFIPIAEESDLIDAIGLWVMRAAGLTLRRWIDHEGFTGSLSFNISARQFIRQ 1083 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 NI ++ + + + I P + +E+TE + E + +++ GF++A+DDFGTGY+ Sbjct: 1084 NIFLKLFDVLQEFQIPPHQLEIELTESSLIESPERFVQWLQEARSMGFQVALDDFGTGYS 1143 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL + +KID F++D+ + D IV++I +AK L +AE VE +Q A Sbjct: 1144 SLGYLKRLPINALKIDRSFIRDLPHDHDDQAIVQAIVAMAKVLKLRTIAEGVERLEQAAF 1203 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L +G +QG+ G P P A+ Sbjct: 1204 LEAIGCDAVQGFFYGPPLPEAE 1225 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 107/466 (22%), Positives = 182/466 (39%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + + L+ + + M + ++ A D LT LPN Sbjct: 415 RKNGEVFPERMSLSAVKDANDKVTHYVCMFTDISAEKAREQQLEFLAHRDTLTGLPNRSQ 474 Query: 338 --RALEQAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 R L +A E + ID + ++ YG + +R + + ++ + Sbjct: 475 FTRMLGEAVELSQSTNRRMAVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGALRHGD 534 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH-WNNTGLDMGYGAAWGRFDGN 447 + +L G E+ +V + L + + + + + A + + Sbjct: 535 IIGRLAGDEICVVAQSICGRDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICLYPDH 594 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 T LL + A A E ++ +++ L +R AL+ G + LY Sbjct: 595 ALTADDLLQGAHAAVYGAKARGSN-AWCFFHENMTQAARERLALEARLRRALELGHMRLY 653 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP G + +L L + G+++P +F+P+ + L VL + Sbjct: 654 YQPQIELATGRLVGAEALLRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQ 713 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ L +IAG + + LEITE E + Sbjct: 714 QWRAAGLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALAEKPEEA 773 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +L + G R+AIDDFGTGY++ LKR D++KID F++DI + D I S+ Sbjct: 774 LAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSV 833 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L A L V+AE VETQ+Q + L + G Y QGY RP P D Sbjct: 834 IALGHAMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAED 879 >UniRef50_B8I783 Diguanylate cyclase/phosphodiesterase n=2 Tax=Clostridium RepID=B8I783_CLOCE Length = 856 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 106/495 (21%), Positives = 203/495 (41%), Gaps = 14/495 (2%) Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 +++ +G + FL + Q +L E + ++A L Sbjct: 356 LVVYVIGAFSILTLFLVVLLVYIRKIRNIRKQLYLSNEELTQTYEELVASDEELRHQLDE 415 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFR-ALEQAPE-----QEAGKSFCCLRIDNLE 361 + I +++ AL D LT LPN R LE + + +DN + Sbjct: 416 IRSIQKSLSQSEEKYNFMALHDVLTGLPNRRSLLEDSSRFLGINTGKKTVLLFIDMDNFK 475 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH-MVNI 420 +++ G I + L +++ LY+L G E +L++ E + + M + Sbjct: 476 YINDTMGHEFGDELINKAGQRLKTALKDLGTLYRLGGDEFILLIYNIENQFEAEDFMSQV 535 Query: 421 LNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L S + N+ L + + + + ++ L+ ++ + Sbjct: 536 LQSFKDEFEIGNSVLHITFSIGAALYPDHGNNIEDLIKCADIAMYKAKEQGKNR-YVLYD 594 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTP 535 + ++++ + + TA+D + +Y QP + + G + +L + G ++P Sbjct: 595 RDMDKAFSERMTIEKLLHTAMDNNEFEVYYQPQFDLQSQKITGLEALLRWKSSELGNVSP 654 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 KF+ + +L VL ++ H +G SVN+ + +LQ +II Sbjct: 655 IKFIKVAEDTHLIIPLGEWVLNQACAFVKELHEKGLQGLTVSVNISTIQILQSGFTRKII 714 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + ++P+ + LEITE + + + +L K G RIA+DDFG GY++ LK+ Sbjct: 715 DIINSHKLNPECLELEITETILIESFTTVFRKLNKLKKMGIRIALDDFGKGYSSLNYLKQ 774 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L +KID F+ + + I R I L K+ ++++AE VE +Q L K Sbjct: 775 LPISTLKIDKSFIDSVSIDEEGRTITRHIITLGKSLGMTIIAEGVEFNEQLEYLKKYHCD 834 Query: 715 YLQGYLIGRPQPLAD 729 +QGYL +P P D Sbjct: 835 RIQGYLFSKPLPGED 849 >UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6G1_9GAMM Length = 702 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 85/462 (18%), Positives = 184/462 (39%), Gaps = 23/462 (4%) Query: 286 ETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 ++ + ++ + +L ++R + + + QA D LT LPN R L Sbjct: 219 GYDFPVEISISYIEFEEKTYVLAVMRDISQRKADEKLIWQQANYDHLTGLPNRRLLLDRL 278 Query: 345 EQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 EQ + + L +D + ++ +G ++ + + L +++++ + +L Sbjct: 279 EQLIHRIHHTNSSLALFYLDLDRFKEVNDKFGHAKGDLLLQDVAKRLTQCVRKSDTVARL 338 Query: 397 PGSELLLVLSGPETEGRL-----QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 G E ++++ E E + + + + + R +N + + + + Sbjct: 339 GGDEFTIIIAELEDEDKANKITVERIAQAILNALNRPFKLDNEQVYISASIGITFYPEDA 398 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL + + + ++ L+ + A+++ + L Sbjct: 399 NFSDVLLNAADQAMYAAKKQGKN-CFQYFSFSMQEEALSRLQLVKELHLAIEKQEFHLVY 457 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + + ++ G++ P++F+P + L V + + + +A Sbjct: 458 QPIIALKTGLISKAEALIRWQHPTRGLVYPNEFIPTAEETGLICEIGDWVFKQVAQQVAK 517 Query: 566 HPCDK-KGPRFSVNLMPLT-LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + ++N P+ L G + Y + +A+ +EITE + Sbjct: 518 WRIKLDPNFQLNINTSPIEYLKSNAFLGNWVEYLNAYSVPGEALAIEITERILMDSHSFI 577 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + G +A+DDFG GY++ +K+ D +KID FVK+I T+ D ++ +I Sbjct: 578 PKKLVNFQSLGIDVALDDFGMGYSSLSYIKKFDIDFLKIDRSFVKNITTSVNDKIVCEAI 637 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +A + VVAE +ET+ Q+ L +G Y QG+L P Sbjct: 638 VAMAHKLGIKVVAEGIETEAQRRCLKDIGCDYGQGFLFSVPL 679 >UniRef50_A0Q1B8 Diguanylate cyclase/phosphodiesterase domain 2 n=2 Tax=Clostridium RepID=A0Q1B8_CLONN Length = 961 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 97/441 (21%), Positives = 180/441 (40%), Gaps = 16/441 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKS 351 + + + + ++ A D LT LPN A ++ + + Sbjct: 506 GNVLKIAGSITDITDRKEAIKKIEYLAYNDSLTGLPNRVAYSRDIYGIIQNVKKDNKIGA 565 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L IDN + ++ G ++ + + + ++ E+E+ Y+L G E ++V G E Sbjct: 566 IMFLDIDNFKNVNDTLGHDYGNELLKKVNKRISNILTEDERFYRLGGDEFIIVQCGSYNE 625 Query: 412 GRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 ++ + + L S+ N + F + LL + Sbjct: 626 KDIELLADNILKLFSKSFIVKNEHIYTTVSLGISFFPKDSCDQSVLLKYADTAMYSAKNL 685 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + +S ++ L +R A+++ +L L QP N E +G + +L Sbjct: 686 GKSK-YLIYNKEMSSNLIRRSQLEEGLRHAIERKELKLVFQPQVNANTGEIKGVEVLLRW 744 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTL 584 G ++P +F+ + + L VL + K SVN+ + L Sbjct: 745 NSEKFGFVSPSEFIVIAEKSGLINSIGEWVLRESCLKRKQWQIENLKDITISVNVSVIQL 804 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q + ++ + ++ + P+ + LEITE + E+++ + + G +IA+DDFGT Sbjct: 805 QQDDFIEKLKEILEKTKLPPECLELEITESVMMESKETNLDILNSIRDIGVKIALDDFGT 864 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK L + IK+D F+ I N D IV I DLA L+V+AE VE +Q Sbjct: 865 GYSSLSYLKMLPINKIKLDKSFIDTIHINKNDKFIVEGIIDLAHKIGLNVIAEGVELNEQ 924 Query: 705 QALLHKLGVQYLQGYLIGRPQ 725 +L + +QGY +P Sbjct: 925 LDVLCEANCDEIQGYYFSKPV 945 >UniRef50_Q31JB1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JB1_THICR Length = 697 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 107/571 (18%), Positives = 214/571 (37%), Gaps = 22/571 (3%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLLLLCT 232 L+ + Y + ++ + A L K + L Sbjct: 121 SLLSQRVKYAINSSLIEDQLRTSQSQLMYAQKLAKLGYWEWDTKADQVTGTGSAFELFGI 180 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 P + D + + + + ++ N L V+ ++ Sbjct: 181 PNQADVTLEQFFSNIIPKDLPLIQQAIADASQGYNDIQVSFRVLHHDNSLSHVDCLGEVS 240 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------ 346 F IS + R Q+ D LT L N + Sbjct: 241 FDEHGDISRIT---GSAQDISRLHKAETLIDYQSSHDKLTDLANRSFFNKNLANFIKEAN 297 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + L ID + ++ + G +R++ + L + +E++ + +L E +++ Sbjct: 298 PKKYSATVILDIDRFKKINDNLGQENGDALLRTVAQRLKKVTREDDFVARLGSDEFAILI 357 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 E L ++ + S+ + + L + + + + + L+ + Sbjct: 358 KNTEDAQELNLSLSRIFHDISKAFNVKDQELFITFSIGISIINQDGDQASELIAHANIAR 417 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GY 519 Q+ L + ++ ++ +Q++L N +R ALD+ ++ +Y QP + G Sbjct: 418 SQAKLKGGNQFL-FYQAEMNAESKEQLMLENDLRKALDRNEIEVYYQPQIDGHSLKPYGA 476 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVN 578 + ++ GI++P F+P+ + VLE+ +K + R +VN Sbjct: 477 EALVRWKHPTEGIISPGIFIPMAESNGMIVDIGRFVLENAIKEAEKWHAEGFDEMRIAVN 536 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L N+ + + + + + + LEITE A SNA+ ++ ++ L G ++ Sbjct: 537 LSGRQFSSSNLIKEVQEVLQNTTLPAKYLDLEITESLAMSNADHNISILKGLKAMGVSLS 596 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ L D IKID F+ ++ + IVR+I +A + SL VVAE Sbjct: 597 IDDFGTGYSSLAYLHSFPIDAIKIDRSFIDNL-ESQEGQAIVRTILAMADSLSLKVVAEG 655 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +E + L QG++ G+P P D Sbjct: 656 IEEEFHVTFLQNKNCDIFQGFMFGKPMPAGD 686 >UniRef50_B3PF61 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF61_CELJU Length = 638 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 124/605 (20%), Positives = 230/605 (38%), Gaps = 38/605 (6%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 V ++L T LI+ L Y M+V +L+ D A + K+ Sbjct: 26 ARRLLQILRVTQIALLTVTLIFIALGLY-RDMVVIVATGLLLFSVDWAVA---HKKIDLG 81 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVF--FIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 +W+ +S+ L+L + + I G + F ++F +G R + ++ A+ L+ Sbjct: 82 TWILFISLSLMLFYLAWTGNGIRGSVPLGFSGILLFAALLGSRRQLLILMSLAICICLLI 141 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLY-----MVRI----YHRS-------EWLN 319 Y V + + + ++ + + Sbjct: 142 GYLNQAGIHVNQVLPTTLATGAIAAVVLGVIGFSALMLAEDYRQALTELERENQLVKSAK 201 Query: 320 RRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMM 371 AL DPLT LPN + Q+ + +DNL+ ++ G Sbjct: 202 DHIEHLALHDPLTNLPNRSMAQAGFREIYARTKRQQQLFGIIFIDLDNLKPINDSLGHQA 261 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM---VNILNSRQIHW 428 H ++ + + L+ ++ + + G E L+ L ++ + L S+ + Sbjct: 262 GDHILKEVAQRLISYTRDETLVCRYGGDEFLVFLPNIQSADDASDASVDILQLISQTYLY 321 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N + + + L L+ + S + +S + Sbjct: 322 RNIDIFCTCSIGIALAPQDGDNLDELIKKADIAMYHSKDSGRN-SFRFFNSSISHNMLEH 380 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L++ +R L + L+ QP + G++ +L + G ++P F+PL Sbjct: 381 ISLISGMRRGLQEQQFSLHYQPKIDLQSHRICGFEALLRWNHPEQGYISPATFIPLAESS 440 Query: 546 NLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L + V+ + + ++N+ + + NI + R + P Sbjct: 441 GLIIQLGEWVINEACRQARAWIDEGMPDFSIAINISSIQFKRGNIDTLVFNALTRNQLPP 500 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 Q + LE+TE ++E + L G +IDDFGTGY+N LK+ + + +KID Sbjct: 501 QYLELELTESLLIEDSERLANTLANLRSEGVHFSIDDFGTGYSNLGYLKKFEVEALKIDQ 560 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+ + ++ DA IVR+I +A + L +AE VE ALL LG Y QGY RP Sbjct: 561 SFVRKMDNHSGDAAIVRAIIQMASSLGLKTIAEGVEDASTAALLRGLGCTYAQGYYWARP 620 Query: 725 QPLAD 729 P+AD Sbjct: 621 MPVAD 625 >UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=Q12PF1_SHEDO Length = 888 Score = 566 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 91/466 (19%), Positives = 182/466 (39%), Gaps = 21/466 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + +L DPLT LPN Sbjct: 411 RKNGEVYPQEITISAVYDDNDTIAYFVAVFTDVSEQRNTQAKLDKLSLHDPLTQLPNRAQ 470 Query: 340 LEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 ++ + + +D + ++ G + + + L ++ Sbjct: 471 FMSRIDNAIYYAKQEGTQLAVVFIDVDFFKHINDSLGHVAGDTILVELANRLSSILHPGA 530 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGN 447 L +L G E +L+ + L +VN + S N + + + + Sbjct: 531 VLSRLGGDEFS-LLTNMASTDNLIAIVNRIFSVFEAPFSCSNGQSIRLTASMGLALYPSD 589 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL ++ E ++ ++ + + L + + L L Sbjct: 590 GKDNDGLLRNADAAMHRAKQDGRN-NYAFYTEAMTQESVRLLQLQSALHEGLKMQRFSLV 648 Query: 508 AQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + E G++ +L G ++P F+P+ + L + VL++ + Sbjct: 649 YQPKVDLHSLETMGFEALLRWNDPILGSVSPAVFIPIAEKTGLINEIGMWVLKTACEQGV 708 Query: 565 THPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 K R +VN+ L L + + + ++ + Q + LE+TE N + Sbjct: 709 RWLSQGKLFNRIAVNVASLQLQRNSFVDDVQQVLLDTGLPAQHLELEVTESCMLQNPAEA 768 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + +++L + G +A+DDFGTGY++ LK+L D +KID F+K+IV + +A I +++ Sbjct: 769 IIELKRLREMGITLAMDDFGTGYSSLSYLKKLPLDKLKIDRSFIKNIVQDANNAAIAKAV 828 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L A +L +VAE VET++Q L + QGY P+P + Sbjct: 829 IALGHALNLQIVAEGVETKEQAEFLRLNDCEQAQGYYFSHPKPSHE 874 >UniRef50_A4X020 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4X020_RHOS5 Length = 875 Score = 566 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 132/740 (17%), Positives = 249/740 (33%), Gaps = 35/740 (4%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLA---WMPLCVMLSILFIF---GWRGV 64 + I+ F + L+ S L ++ +L W + + IF G R Sbjct: 137 LLIYCALFIACLFLLHFDIKHSVLGPAQTAVAYLYPALWFSVLAFGILSLIFFDHGKRSF 196 Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLG--SQTFVVLCACAILRWQLGTRWRYGLTSRYVW 122 L + +++ + +L + + R Sbjct: 197 PLFLLVIGIAAEAVADFWYVRAIMNGTYTPGGMTLLLWLSTTGLVALAAAEHLALIRRAG 256 Query: 123 QRLFWLGLVTPIGIKCSMY--LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 L T GI + +V + F +S FG +L L A + Sbjct: 257 LTQSALRRRTDAGIAQAALPGIVIAIFMLSGSLSGAFGRNWEYVAFSSVLGLIFAAVAAL 316 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--LCTPYENDF 238 +I S + +R + + +V++ + Y N+ Sbjct: 317 R----EYAVIRSHEALRTEAEESREEVSLSRRRLAAVLESTSDAVVVFDRSMRVEYFNEN 372 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS-TLCLLNYNQNFLQGVETEYSLAFILAV 297 L V ++ V + + + Sbjct: 373 AVSALEGVGAPGLGASFTEIFPETSFPGALVRFRSAQSRQEPMEYDALLSGPDRWLSING 432 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----EAGKSFC 353 S + L R R A DP+T L N + ++ E S Sbjct: 433 YPS-NGGLSIFFRDVTEQRTARERMAHLAHHDPMTGLANRMKFSEELQRCVSLETPVSVL 491 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +DN + M+ G + + I R L LM+ +L G E +++ G + Sbjct: 492 LIDLDNFKDMNDTLGHPLGDAVLVEIGRRLQQLMRPGNLAARLGGDEFAMLIFGQQDRIA 551 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 L + + +R I N + + + L+ ++ + Sbjct: 552 LGAIAERVLARISAPIALPNQTVRVTASMGIAM--DDVANRAELVRTADIALYEAKRDNR 609 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + + ++ ++ + AL + +++ QP+ + G++ +L Sbjct: 610 G-TYRFFDGAMEIRLRERTAIIADLTAALGNNEFVVHYQPLYELASHRICGFEALLRWTH 668 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G+++P+ F+P+ L + VL + A P R +VNL P Sbjct: 669 PVRGLVSPEVFIPIAEDTGLIHQIGAWVLRTACTAAADWPA---DVRIAVNLSPRQFRDL 725 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + R+ + + P + LE+TE ++ S++ QL++ G RIA+DDFGTGY+ Sbjct: 726 GLPTMVARVLEETGLRPNRLELEVTEAALLDDSGSNLDIFAQLNRMGIRIALDDFGTGYS 785 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 L++ +KID F+ + + IV +I +A A S+ V AE VET+ Q Sbjct: 786 ALSYLQKFPFAKLKIDRSFITGLPDSESSMAIVSAICSMAHALSIRVTAEGVETRDQFDW 845 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 L +QGYLI RP P Sbjct: 846 LQTR-CNEIQGYLISRPVPA 864 >UniRef50_C7MR68 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Actinomycetales RepID=C7MR68_SACVD Length = 919 Score = 566 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 110/614 (17%), Positives = 216/614 (35%), Gaps = 34/614 (5%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF-AQILWRRDIAPS 207 +S G T+V + A R+ SP +L D Sbjct: 304 LGRPVSELVGVTLDPATIVAEGGVVEAEHRKADGSALTVRVSASPMDDGYVLMCADETAR 363 Query: 208 LGKEKRAFTLS-------------WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 E+R T+ L + + + G +F + G Sbjct: 364 RTVERRYRTVVTALDEGVVVIDENELVGSANPAAGRILGLPVEAMIGCSPALFPLYDESG 423 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRI 311 + + + + L+ L S ++ Sbjct: 424 ARVPPSEYPSALTRRTGHASHGRVLRARRPDGQWVWLSMSCRPLDSDKTPPHEVVVSFTD 483 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKSFCCLRIDNLEFMSR 365 + R A DPLT L N + Q E+ + +D + ++ Sbjct: 484 ITERRAIGERLEHDATHDPLTNLANRTLILQRLEEMLRRSGGRPVCVLFIDLDKFKVIND 543 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILN 422 G + +R L +++ + + +L G E +V S + ++Q ++ Sbjct: 544 SLGHGIGDEVLRIAGERLKNCVRQGDLVGRLGGDEFAIVASDMAHDSQIQALIGRIRRAL 603 Query: 423 SRQIHWNNTGLDMGYGAAW-GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + L + ++ + + LL Q+ + + + Sbjct: 604 TEPVVVEGRRLRIDASIGVVTTHADDERSAEDLLRDADVAMYQAKTRGRGR-YEFFDVEL 662 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKF 538 + +Q+ L +R ++ G L + QP+ + + +L G ++P +F Sbjct: 663 RERVQRQLRLEQDLRESVRGGQLWVAYQPVVDLRTQQRVAVEGLLRWDHPVHGRISPGEF 722 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +PL + +L +L + + LA+ + +VN+ L ++ + Sbjct: 723 IPLAEESDLINLIGGHMLRTATRELASRRRHSGVRTQLAVNVSARQLDDGSVVSAVNEAL 782 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + P + LEITE E++ + L G R+AIDDFGTGY++ +L +L Sbjct: 783 RATGLPPGELCLEITESALMQEPEAAADVLTALRDLGVRLAIDDFGTGYSSLAQLWKLPL 842 Query: 658 DIIKIDGVFVKDI--VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV + + I++ I +A + L+VVAE E ++Q A+L +LG Sbjct: 843 DTLKIDRSFVAGLDGPNHPDAEAIIKGIITMAHSMGLTVVAEGTENERQIAILRELGCDQ 902 Query: 716 LQGYLIGRPQPLAD 729 QG+ +G+P P + Sbjct: 903 AQGFHLGKPAPAHE 916 >UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction protein n=3 Tax=Alteromonadales RepID=B4RZW0_ALTMD Length = 794 Score = 566 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 99/440 (22%), Positives = 183/440 (41%), Gaps = 19/440 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 ++ I E + QA D LT LPN + + + L Sbjct: 346 QFAHIASIAIERERASELIWKQANFDTLTGLPNRNLMLDHLQLALKTADREGDRVAVAFL 405 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +DN + ++ G + + + ++ N+ + +L G E +++L+ ET + Sbjct: 406 DLDNFKDINDTLGHDVGDQLLIECAERIKQCLRANDTVSRLGGDEFVVILNSIETLSSID 465 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 +V + + N + + + ++ LL + Sbjct: 466 IVVQKILDVILKPYLINVERVHTSASLGVTLYPDDARDIKGLLKNADQAMYGAKDLGKN- 524 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + + + K++ LLN +R A+ +L + QPI + + + +L + Sbjct: 525 SYKYYTQDMQAVAVKRITLLNDLRYAIQNDELFIEYQPITSFKDGKAIKAEALLRWQHPE 584 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT-LLQK 587 G + PD+F+PL + L V E + K + + + +N P Q+ Sbjct: 585 KGRIAPDEFIPLAEESGLIIEISNWVFEEVCKNVKRWQTHYCRELQICINTSPSQYFQQE 644 Query: 588 N-IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 I + RL +I+ ++++LE+TE + + Q + G IA+DDFGTGY Sbjct: 645 TSITDWLTRLLDE-NIAARSILLEVTENLLMEADTNVSKKLFQFRQAGVDIALDDFGTGY 703 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+L D +KID FVK + + D ++ +I +AK + VVAE VETQ+Q Sbjct: 704 SSISYLKKLPTDYLKIDKSFVKTMTDVSNDKVLCEAIIVMAKKLGIKVVAEGVETQEQYD 763 Query: 707 LLHKLGVQYLQGYLIGRPQP 726 +L+ +G + QGY I RP Sbjct: 764 ILNNMGCDFGQGYFIARPMS 783 >UniRef50_Q1NS23 PAS:GGDEF:EAL:Response regulator receiver n=4 Tax=Deltaproteobacteria RepID=Q1NS23_9DELT Length = 989 Score = 566 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 100/466 (21%), Positives = 187/466 (40%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + R A D LT LPN Sbjct: 366 RKDGEVYPELLSISTVYDEAGEPSHYVGVKTDLTNLRRSEERLQHLAHHDHLTGLPNRLL 425 Query: 340 LE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 LE +A +++ + L D ++ G + ++ + L +++ + Sbjct: 426 LEALLEHALERAQREQSRLAVLVLNCDRFRTINESVGYAAGDELLVAVVKRLQSILRAED 485 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGN 447 L +L G E LVL G ++ + L + + + + + + Sbjct: 486 TLARLAGDEFALVLEGLGDYREVEFTLQRLWQALEQPFALPDGYEVYIQASVGISFYPQD 545 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 +T+ LL + Q+ + ++ ++ + + L +R AL Q + LLY Sbjct: 546 DDTVAGLLVRADGAVNQAKDGGGNRCYYA-TSTLNEESRRGLELEAALRRALQQREFLLY 604 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP G + ++ + G++ P +F+P + L V++ + L Sbjct: 605 YQPKVALAGGRITGAEALIRWQRPGHGLVAPGEFIPAAERSGLIVAMGAWVIDEGCRQLR 664 Query: 565 THPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + R +VN+ + + + + ++ + LE+TE S E++ Sbjct: 665 RWREEGLGDLRLAVNVSASQFRAPGLVTALKQALAEHRVAAGQLTLELTESMLMSEPEAA 724 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + +E+L G +A+DDFGTGY+++ L R D +KID FV+ IV++ A I SI Sbjct: 725 IARMEELKTLGVELALDDFGTGYSSFANLSRFPIDQLKIDRSFVEGIVSSPDAATIAASI 784 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VVAE VE Q Q L + G +QG+L +P P AD Sbjct: 785 IAMAHQMRLKVVAEGVENQPQANYLRRNGCDEIQGFLFSKPLPAAD 830 >UniRef50_A9BVR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BVR1_DELAS Length = 828 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 105/434 (24%), Positives = 179/434 (41%), Gaps = 14/434 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRI 357 + +R + +R A +D LT LPN A+E A S + + Sbjct: 355 IGFMRDLTQQRVAQQRIEQLAYSDALTGLPNRLNLTERVDAAIEAARAGGTVFSILFIDL 414 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G ++ + + L M+ + L +L G E +L L G E Sbjct: 415 DRFKIINDSLGHQFGDRVLKLVAQRLSDCMRPVDILCRLGGDEFVLYLQGCNAELAASVA 474 Query: 418 VNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 IL R + G + ++ + TL L+ Q + Sbjct: 475 RRILQEMERPFLLDGLGFSVQCSIGVAQYPADGLTLDELIRQADTAMYRVKERGRGH-FS 533 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 + +S ++ L + +R AL+ G + +Y QP + + +L + G+ Sbjct: 534 FYQPQMSAGLLSRMKLEHAMRQALEHGRMAVYFQPQVHIDSDRIVAAEALLRWTDPEFGV 593 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGR 592 ++P F+PL + V+E ++ A + SVN+ L Q R Sbjct: 594 VSPGVFIPLAEESGYIVTLGAWVMEQAVQEAARWQQQGMPIKVSVNVSALEFRQSGFVER 653 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + L + Y ++PQ + LE+TE +A+ + Q+ G + IDDFGTGY+N L Sbjct: 654 VTELLRSYGLTPQLLELELTESILLQDAQDMALRVCQIADLGVGMVIDDFGTGYSNLAYL 713 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K+L IKID FV+ + ++ D IV +I L A + +VAE VET +Q +H++ Sbjct: 714 KKLPISKIKIDQSFVRGLPSDEGDQAIVGAIISLGLALGVEIVAEGVETHEQLTAIHRMQ 773 Query: 713 VQYLQGYLIGRPQP 726 Y QG+L P Sbjct: 774 GHYFQGFLCAPGLP 787 >UniRef50_Q2I6K9 Multidomain signal-transduction protein n=1 Tax=uncultured delta proteobacterium DeepAnt-32C6 RepID=Q2I6K9_9DELT Length = 955 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 88/442 (19%), Positives = 173/442 (39%), Gaps = 19/442 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK---------SFCCL 355 + + + A D L L N + E+ + + + Sbjct: 482 IAGSQSDITARKIAEDQLRHDAYHDVLCGLANRALFMERLERAIKRLNRRDDYLYAVLFV 541 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + L ++E + L +L G E ++L + Q Sbjct: 542 DLDRFKNINDGLGHLAGDSLLIELSTRLSGYVRETDTLARLGGDEFAVLLEDICSPLDAQ 601 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + + +L + Sbjct: 602 RAAQRFQEALTTPFQLKGQEVFVTASIGIALGNRSYSGAEEVLRDADTALFYAKDGGRAR 661 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYD 529 ++ + + + ++ L N +R ++D+GD L PI + E G++ ++ + +D Sbjct: 662 -HETFQRGMHLRAQARLQLENDLRRSVDRGDFHLVFHPIVDVESCEIAGFEALVRWMHHD 720 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQ 586 G ++P+ F+ + + L V+E + +A P S+N+ P L Sbjct: 721 RGQVSPEDFIGVCEETGLIIPLGKLVIEGACEAIAEWRQRHPELSPPTISINVSPRQLSA 780 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + + +R+ ++PQ + LEITE + +SS+ ++ L G + IDDFGTGY Sbjct: 781 EGLVDDVRHALERWKLAPQLLTLEITESALLDDIDSSIQVLKDLKDLGVGLQIDDFGTGY 840 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L +L D +KID F++D+ ++T IV +I LA + L V AE VE Q Sbjct: 841 SSLSYLSQLPIDALKIDRSFLRDMTSDTNQFNIVSAIITLAHSLDLEVTAEGVEHVAQLD 900 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L +L + QGY P Sbjct: 901 ELRRLRCNHAQGYYFTTPISSD 922 >UniRef50_C6BS66 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS66_DESAD Length = 1040 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 96/551 (17%), Positives = 208/551 (37%), Gaps = 26/551 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 + R L + ++ L ++ T + + GY Sbjct: 471 ERKIFRHKSRFMQLFESSPQAIALTDSKGNVVDTNRAFNKLFGYSTEEMAPCCENLSPTN 530 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSE 316 + ++ + + + + + Sbjct: 531 TGKIRANLKKILGGETYRTEDMRRHKNGRLIPVSILGYPFLYNEEISGTFIIYDDISQRK 590 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHY 367 RR Q+L D LT LPN + E+ E + L ID + ++ Sbjct: 591 EYERRLSYQSLHDSLTGLPNRTFFLERLEETLDMSRKIPERTFAVLMLDIDMFKRINDSL 650 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G + + + + ++ + + ++ G E +++ T + ++ + + Sbjct: 651 GHQAGDELLIEVGKRIKCCLRPVDTVARMGGDEFAVLIEDFSTPQMVIQIIRDIRNEIRK 710 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + ++ + + + E + ++ ++ + + + Sbjct: 711 PMSISSREVVISSSIGIVFKTSSYEHPEHIIRDADISMYKAKEQGVNK-FKVFNKTMHEK 769 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 + +L+ IR + + + Y QP+ + + G++ ++ + G +TPD+ +P+ Sbjct: 770 ALQSLLIETEIRQGIPENEFFPYFQPVYSMQNRNLAGFEALVRWNHPERGFLTPDQIIPV 829 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + L D +L ++++ +VNL P L + ++A I + + Sbjct: 830 AEETGLIVELDRIILFEACRFMSAWIRLYPNANDLFLTVNLSPSQLSKPDLAEAIETIVQ 889 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 I + LEITE +S N++++ + G R+A+DDFGTGY++ +L+R A Sbjct: 890 ETKIPADNLKLEITESAIMERNAASSLNLKKIGEMGIRLAVDDFGTGYSSLAQLQRFPAS 949 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV + ++ IVR++ L + S+ V+AE VET++Q LL +G Y+QG Sbjct: 950 TVKIDRSFVSHMASDHESLEIVRAVNALGHSLSMDVIAEGVETREQLILLKDIGCDYVQG 1009 Query: 719 YLIGRPQPLAD 729 Y +PQ D Sbjct: 1010 YYFDKPQTNED 1020 >UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax=Enterobacteriaceae RepID=C9XYY6_CROTZ Length = 827 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 100/465 (21%), Positives = 182/465 (39%), Gaps = 20/465 (4%) Query: 280 NFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 +L + + + + R +L D LT LPN Sbjct: 351 RYLSAQGHQRYCNLVAKPIATAEGGLSFRGTATDVTLEVEAQARVQYLSLHDELTGLPNR 410 Query: 338 RALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 +++ E +E + L +D + ++ +G + + + L +++ Sbjct: 411 VRMKEFLEGKLQSRPTREHPLAMISLDLDKFKPVNDLFGHGVGDELLHQVSARLRACLRD 470 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDG 446 + + + G E +L++ E + L+ + + + R + + +G Sbjct: 471 FDLVARQGGDEFILIIPDIERKEALEQLCERILAEINRPFSVQDHEILIGASMGIALAPQ 530 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + LL ++ + + ++ Q ++ + N++R A+ L Sbjct: 531 DAVNATDLLRFSDIALYKAKSSGRN-GWVFYDAHMAEQIVQRREMENSLREAIRDRQFQL 589 Query: 507 YAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 QP + + + +L G++ PD+F+PL + L VL + + Sbjct: 590 VYQPRYDMNAEKIVAVEALLRWHHPTLGLLMPDQFIPLAEETGLIIAISDWVLNAACRDA 649 Query: 564 ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 D G SVN+ + + R+ ++P+ + LE+TE SN E S Sbjct: 650 ---QRDMPGLAISVNISAVEFRTPGLVERVQEALNATGLAPERLELEVTENATLSNPEQS 706 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L G R+ IDDFGTGY++ L+ D IK+D FV + + IV +I Sbjct: 707 LELMNGLKALGVRLLIDDFGTGYSSLSYLRTFPFDGIKLDKSFVAGMPHSDNANSIVENI 766 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L KA SLS+ AE VETQ+Q A L QGYL+ RP PL Sbjct: 767 IGLGKAFSLSITAEGVETQEQLAQLKMYQCDETQGYLMCRPLPLE 811 >UniRef50_Q0AKC4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Hyphomonadaceae RepID=Q0AKC4_MARMM Length = 697 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 107/516 (20%), Positives = 196/516 (37%), Gaps = 37/516 (7%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 IA + + +F + L VG+ P LT A N + E + Sbjct: 179 LIALFALGIFLPLAALIVGRALRPVQTLTDAARLASSKNLDMRISVKTGDELEVLANA-- 236 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAG 349 R++ R + +R H A D +T LPN + + E Sbjct: 237 ----------FNRMFARLDGNLKRIHRLAYVDLVTELPNRERFRKETERVARKSLEDGGS 286 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK----------LYQLPGS 399 + L +D + ++ G+ + + R L + + + + +L G Sbjct: 287 GAVLFLDLDRFKRVNDSLGIGEGDRLLEMVGRRLSEVTRGCDMASGNTEDPSMVARLGGD 346 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++L E + N L + + +G F + + L+ Sbjct: 347 EFTVLLPTIEDSADAARIANKLVDAIRLPFEISGHQVFLGVSVGVAVFPQDGADPETLMR 406 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---N 513 + A E ++ ++++L N +R A+ Q L+++ QP + Sbjct: 407 HADLAMAHAKRAGGSAA-QFFEPTMNQSAFERLVLENELRDAVAQDQLVVFYQPKVLMTD 465 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G + ++ G+++P F+ + L VL + + A Sbjct: 466 GACAGAEALVRWQHPTAGLLSPGAFIEAAEECGLIGEIGDWVLRAACREAAAWRDRGLEI 525 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ + + + ++ ++ P + LE+TE A N E + ++ L Sbjct: 526 PVAVNVSAMQFERDGFSDSVLEALAAANLPPHLLELELTESIAMENPERVIEQVQPLRDR 585 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G AIDDFGTG+++ L R+ D+ KID FV+D+ T+ ++V +I +AK+ L Sbjct: 586 GVNFAIDDFGTGHSSLAYLTRMPFDVFKIDQSFVRDMTTDHHARIVVETILAMAKSLKLE 645 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET +Q +L G QG+L RP P D Sbjct: 646 TVAEGVETPEQHQMLRAQGATLAQGFLFARPMPAGD 681 >UniRef50_C6QG37 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QG37_9RHIZ Length = 625 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 98/480 (20%), Positives = 183/480 (38%), Gaps = 21/480 (4%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 W + L + F + ++ + + ++ H A Sbjct: 131 WIERHVAALARGETFTHTQHLKSGRIVLVTNKPLEGGGWVDIQEDITERRQAEQKIHWLA 190 Query: 327 LTDPLTLLPNFRALEQAPEQEAG-------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 DPLT + N +A ++ + + +D + ++ G + ++S+ Sbjct: 191 RHDPLTEIANRLQFHEALDEALRNLAPSQTLALHWIDLDGFKTVNDTLGHPVGDALLKSV 250 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETE--GRLQHMVNILNSR---QIHWNNTGLD 434 ++L +++N+ + +L G E ++ S + M L + Sbjct: 251 AKSLKRAVRKNDIVARLGGDEFAVLQSASRVVRKADAERMAQRLLKEICKPHDLGGQQVS 310 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + +T + LL ++ A +A + ++ + L + Sbjct: 311 CSASIGIAFAPLHGQTAEQLLKAADLALYKAKAGGKGIAF-FYDPDIADDANSRYELQSD 369 Query: 495 IRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R ALDQ L LY QP+ + E ++ +L G++ P F+P+ + L Sbjct: 370 LRGALDQNQLELYYQPLVDTENRDVIAFEALLRWHHPLRGMIAPADFIPIAEETGLIVEI 429 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 L + P R SVNL P+ + N+ ++ + ++P + LEI Sbjct: 430 GEWALIRACQEAVKWPD---TIRVSVNLSPIQFERGNLYQAVVNALRISGLAPHRLELEI 486 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + ++ + L G RIA+DDFGT YA+ L+ D IKID FV+D+ Sbjct: 487 TEGVLLRDEINTRAILHNLRTLGARIALDDFGTAYASLSYLRSFPFDKIKIDRSFVRDLD 546 Query: 672 --TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I++++ L K +S VAE +ET Q + G LQG+ P P +D Sbjct: 547 VGKRKDCEAIIQAVAGLGKQMQISTVAEGIETLDQAQTVTAAGCNELQGFYFSHPVPGSD 606 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 79/466 (16%), Positives = 164/466 (35%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y+ ++ + + + + R QA D LT LPN Sbjct: 343 RKSGELYAAWLTISAIKDSHGRTTQYAAIFSDITEDKRNQERIKHQAYHDALTDLPNRLL 402 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + L +D + ++ YG + ++ + L +++++ Sbjct: 403 FIDRLTQAIAQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLLLQGVAGRLRRAVRDSD 462 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTG-LDMGYGAAWGRFDGN 447 + +L G E ++L + + + + + + + + Sbjct: 463 TVARLGGDEFTILLPQIGSVEDAAKVAQKILASLRQPWSFEGIPSFCITTSIGIAVCPTD 522 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E + L+ ++ A ++ +++ + +R ALDQG+ +LY Sbjct: 523 GEEAETLMHNADAAMYRAKAQGRNH-YQLYTPELNAWAFERLAMETRLRRALDQGEFVLY 581 Query: 508 AQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + ++ D G+++P +FL L L LE Sbjct: 582 YQPKVEAATGNWCAVEALIRWQHPDLGLVSPTEFLRLAEDTGLIVPIGEWCLEEACVRNK 641 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 R +VNL N+ + + ++ + P + LEI+EE A+ + Sbjct: 642 AWQDAGLPPVRMAVNLSARQFQHPNLLAAVEKALQKSGLPPAWLELEISEEVILRFADLA 701 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + L G + +D +G + L++L D +KI V D+ V+++ Sbjct: 702 PIVLGDLKSLGLSLTMDQYGKRDSRITLLQKLPIDRVKIAASQVIDLSACHDARKSVKAL 761 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA++ L V A+ V T++Q L G +QG+L P + Sbjct: 762 IALARSLDLHVAADGVGTREQCDFLTAAGCDEIQGHLFSDPLSAEE 807 >UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKZ2_PSEU5 Length = 886 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 111/502 (22%), Positives = 193/502 (38%), Gaps = 25/502 (4%) Query: 252 TLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLY 307 L G+ F W+ + + + + ++ + + Sbjct: 369 LLASGRHGPDFYRSMWSSIEATGVWEGEIWNRRKSGEIFPEWLTISAVRNVHGEVTHYVA 428 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + R H A DPLT LPN R L + + +DN Sbjct: 429 AFTDITDRKAAEERIHNLAFYDPLTGLPNRRLLLDRLHQAMAVSRRSNQLGALMFIDLDN 488 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRL 414 + ++ +G +R L ++ ++ + +L G E +++L + Sbjct: 489 FKNINDLHGHQTGDQVLRVAAERLHAEVRASDMVARLGGDEFVVMLENLGDDPLRAAAQA 548 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 +H+ L R N GL F G + L+ + ++ Sbjct: 549 EHIGMKLLNSLDRSYRLNELGLYSSASIGVVLFGGEACSSDELMKRADMSMYEAKISGKN 608 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYD 529 AL + + +++ L IR L G+ +L QP N G + ++ Sbjct: 609 -ALRFFDPRMQLAVQERLRLEAGIRQGLKNGEFVLSFQPQLEQNAGVIGAEALVRWQHPQ 667 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQK 587 G+++P F+ L DLQVL+ LA SVNL L Q Sbjct: 668 RGLLSPAAFIAQAEHAGLIHALDLQVLQQACGQLARWAATPAFADLTLSVNLSAHLLYQD 727 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + +++ L +R +P + LE+TE N ++ + +L + G R +IDDFGTGY+ Sbjct: 728 HFVEKLLDLLERSGANPARLKLELTETLLLDNMPEAIARMTRLKQHGIRFSIDDFGTGYS 787 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L++L D +KID F++ + + IVR+I LA L V+AE VE+ Q+++ Sbjct: 788 SMSYLQQLPLDELKIDQTFIRRLPDDASSLTIVRAICALASGLGLEVIAEGVESGAQRSV 847 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G QGYL G+P P + Sbjct: 848 LLGNGCHRFQGYLFGKPMPAME 869 >UniRef50_B5ZH00 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZH00_GLUDA Length = 698 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 104/470 (22%), Positives = 179/470 (38%), Gaps = 19/470 (4%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR---IYHRSEWLNRRWHLQALTDPLT 332 Y ++ E L + + Y++ + R H A D LT Sbjct: 217 RYEESIADRYGMERILLTSKIPFYDDASGMRYVLTTSLDITDRKKAERELHHLAYYDQLT 276 Query: 333 LLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LP+ L Q +F + +D + ++ G + +R + L Sbjct: 277 GLPSRSKLETEMQVLLRQRGADGPPFAFVLMDLDRFKGINDTQGHTIGDLLLRKVALRLR 336 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 + + +L G E +V HM + +R + +G A Sbjct: 337 TALPRAGIIARLGGDEFAIV-HDVIDAADAAHMAERIVGIFARPFTLGDRVTSVGASAGV 395 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F T + LL + ++ +E + L +R A++ Sbjct: 396 TLFPARGATFETLLKRADLAMYRAKNEGRCR-YAFFDEEMEQAFAATTELEQALRRAVEN 454 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + +L+ QP + G + ++ ++ G ++ P FLPL + L A + L Sbjct: 455 EEFVLHYQPQIDLASGTLCGVEALIRWVQPGGDLVHPGCFLPLAEETGLIAPMTVWSLRE 514 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + A D R +VNL + Q ++ ++ + P + LE+TE Sbjct: 515 ACRQAARWQSDGIHIRVAVNLSGVLFRQHDVHRLVVDATTEAGLDPSFLELELTETAVIE 574 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N ES+ + L + G +AIDDFGTGYA+ L RL +KID VF++D+ ++ Sbjct: 575 NPESAGRQLAALQQMGVSVAIDDFGTGYASLVYLTRLPIHRLKIDRVFIQDLGSSPGSRA 634 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV++I L K + V+AE +E Q Q L + Q QG+ G P P A Sbjct: 635 IVKAIIALGKNLGIRVIAEGIERQDQLRWLEEQDCQEAQGFYFGYPVPPA 684 >UniRef50_Q2RNE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodospirillaceae RepID=Q2RNE1_RHORT Length = 951 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 110/576 (19%), Positives = 205/576 (35%), Gaps = 27/576 (4%) Query: 179 YNMLFYYLTRMIVSPH---FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 +F + R I A R + L A VL L + Sbjct: 363 GRRIFIAVIRDITQRKETEGALAATRARLQTIADNVPGLVFQRELTAEGVLRFLFVSNGV 422 Query: 236 NDFIAGYLVPVFFIIFTLGVG----KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 ++ + + L + S L + + E L Sbjct: 423 HEVLGITPEALLADGELFLGAMDPDVRAAFRETLRQSASRLEPMEEDIKLRGRDGEERWL 482 Query: 292 AFILAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG 349 ++ + + + A DPLT L N ++ Sbjct: 483 RGWSRPSRREDGSVVWDGVTLDVTDRKRAEDKLTFLAYYDPLTGLGNRSLFIDRFDRARR 542 Query: 350 --------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D ++ G M + ++ R L ++ + + G Sbjct: 543 FAESIQAWVAVLSIGLDRFGMVNATIGHTMGDKVLIAVTRRLQQSLEAGSIVCRAGGDRF 602 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 L++L+G L+ +V + I D+G + + L+ Sbjct: 603 LVLLTGLTDRADLREVVATIQDAFVPPIEVEGQQFDIGLTIGGALHPEDGREAETLIMHA 662 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--- 515 ++ A + + + + + +R L++ + + Y QP + Sbjct: 663 DAALHRAKGGGG--AFQMFTPEMGARAAHLLTIQHKLRRGLERHEFVAYFQPQVDLRSGL 720 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PR 574 G + + + G++ P KF+ + ++ L QVL+ +WL+T Sbjct: 721 ITGCEALARWNSPEDGLVPPGKFIGVAEEYGLIDAICGQVLDDSCRWLSTWRARGLPQVP 780 Query: 575 FSVNLMPLTLLQK-NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ + + + ++ + P+ + LE+TE A S+ E+++ + L + Sbjct: 781 VAVNISGRQFQNARQLVAMVDQALRQSGVDPRLLELELTESSAMSDPENAIAVVNLLRER 840 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G AIDDFGTGY++ LKR +KID FV D+ T+ DA IV++I +A A +L Sbjct: 841 GVSCAIDDFGTGYSSLSVLKRFPIGKLKIDRSFVMDVTTDPNDAAIVQAIIAMAHALNLR 900 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE VET A L ++ +QG+L RP P D Sbjct: 901 VVAEGVETLDHLAFLREVHCDAVQGFLFARPLPGED 936 >UniRef50_A4JQX8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JQX8_BURVG Length = 913 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 105/485 (21%), Positives = 190/485 (39%), Gaps = 13/485 (2%) Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 G+ F + A++ + + + +A + + ++ Sbjct: 418 AGQQGLLFEQMAQALAAGSAGARLLRSRRADGSAFWGQLYVAPVRDDLTYHICVISDLTE 477 Query: 315 SEWLNRRWHLQALTDPLTLLPNFR----ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLM 370 + QA D LT LPN +EQA + + + +D L+ ++ G Sbjct: 478 LIDSRDQLVRQARRDALTGLPNRATLRELIEQAVAERRAFALLFMDVDRLKDINDSLGHG 537 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIH 427 +R + + L + E+ + + G E + +L P+ RL ++ + R + Sbjct: 538 AGDRLLREVAQRLSGCVGEDGTVTRYGGDEFVAMLGRPDDGDRLAALLRRIARALERPVQ 597 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + + + + LL Q+ A ++ + + + Sbjct: 598 IGDAQSRVQLSIGVACYPADGLDAETLLKHADLAMYQAKARGRN-TVELFKPSFAEAAER 656 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L + +R AL+ L QP + G + +L + G ++P F+PL Sbjct: 657 RIALSHRLRAALEHDGFELAYQPQIDVRTSRVSGVEALLRWHDAEMGTVSPAIFIPLAED 716 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L + VL S+ R SVN+ P L + + R+ + Sbjct: 717 IGLIGQLGEWVLRSVCGQAKRWADTLPALRVSVNVSPRQLASGDFCSVVRRVLDASGLPA 776 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE + ++ + L++ G IAIDDFGTGY++ L+ AD +KID Sbjct: 777 HQLELEITEGALVA--PGALPALRALNEIGVLIAIDDFGTGYSSLSYLRTFHADRLKIDM 834 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+ I T+ D I+R+I LA++ VVAE VE Q + L G +QGY R Sbjct: 835 SFVRGIGTHCADEAIIRAILALARSLHFEVVAEGVERPDQLSFLVAEGCPIVQGYHFCRA 894 Query: 725 QPLAD 729 P A+ Sbjct: 895 VPAAE 899 >UniRef50_UPI0001698B39 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B39 Length = 622 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 101/501 (20%), Positives = 197/501 (39%), Gaps = 19/501 (3%) Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + II G+ L A + + + + + + + Sbjct: 116 SMLLIITVAGMIVSGLLLARLMSADVQRMIKAMVELAKGNTGVQVPASVMASRELKAMGQ 175 Query: 305 LLYMVRIYHRSEWL--NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 L + R + R+ A D LT LPN + G + Sbjct: 176 ALIVFRD-SLIKLADSQERYQQLAQHDTLTGLPNRLLFHDRLNHALNRANRSKIGLALLF 234 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ +G M + + + LL ++E + + +L G E +++L G + Sbjct: 235 LDLDRFKQINDAFGHPMGDRLLALVAKDLLEALREEDTIARLGGDEFVVILEGVHGRDHV 294 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 ++ L + R+ ++ + +G + + E + L+ Q+ A Sbjct: 295 INVAEKLLAVIGRERSLDSLQMHIGVSIGISLYPEDGEDVTTLVRNADAAMYQAKAKGRN 354 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 M++ L +R A++Q LL QP + + G + +L Sbjct: 355 -GYAFYTPMLTEVLEASFELERAMRQAVEQEQFLLLYQPQVDVESGDIVGVEVLLRWQHP 413 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQK 587 + G+M P++F+ L + L ++ L+ + + R S+N+ L Sbjct: 414 ELGLMLPEQFISLAEESGLILPLGRWLVRQALQQASQWQLDGLRPVRLSINISNHQLADV 473 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 A + L ++ + P + LE+TE N E + ++E + G +IAIDDFGTGY+ Sbjct: 474 QFASELGELLGQFGLDPGLIELEVTENSCAENLEILIEHLESIKALGVQIAIDDFGTGYS 533 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ D +K+D F+ D++ + + IVR++ L ++ L V++E VE + A Sbjct: 534 SLSYLKQFPVDTLKVDRTFIHDLIGSMENQAIVRAMIVLGRSLGLQVISEGVEQSAELAW 593 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G QG+L +P Sbjct: 594 LRAEGCDTYQGFLHSQPMSAE 614 >UniRef50_A0YZ09 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YZ09_9CYAN Length = 776 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 96/573 (16%), Positives = 193/573 (33%), Gaps = 42/573 (7%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 +R E + LS L+ + Y+ P F I+ Sbjct: 166 IAERQRIEESLRESESKFRQLSEHIQEVFWLMGYDATSKQFTAIEYVSPAFATIWGKTCE 225 Query: 257 KL---------------RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL---AFILAVL 298 L + L + + T + F + Sbjct: 226 SLYENPWEWLSSIHSDDHERVEKAFTEKAILGSFDEEYRVVHPDGTVRWIRDRGFPVTDD 285 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QEAG 349 + + + + L D LT L N Q E Sbjct: 286 KGEVYRVAGIAEDITNLKRAEAHLVRETLHDSLTGLANRTYFMQRLEMAIKKRNRHNNYR 345 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D+ + ++ G ++ + I R L +++ + + +L G E +++ + Sbjct: 346 FAVLFIDLDDFKRINDTLGHLIGDQLLMQISRILTGSVRDIDSVARLGGDEFTILVEDVQ 405 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + ++ + + + + + N + ++ ++ Sbjct: 406 DWQDVLNITQRIQEQLTSAVQLEHHEIFTSTSIGIVFSTPNYQNGTEVVRDADIAMYRAK 465 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--------GEG 518 A + + + Q V L N +R A+ +L LY QPI + EG Sbjct: 466 ADGKG-CYEVFDRSMYDQVLHLVELENALRQAIANQELHLYYQPIVSLRDNSQDHLIIEG 524 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR---F 575 ++ + G+++ +F+ + VL+ F Sbjct: 525 FEVLSRWHHPKKGLISASEFISIAEDTGQINEIGEWVLQQACIQFQQLRSHYPDVTNLYF 584 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 S+N+ L + ++ + + I P + LE+TE N + ++++ + G Sbjct: 585 SINISGRQLRESSLLNLLDHTLQTTQIPPHCLKLELTESSLIENTTIAAKILKEIQQRGI 644 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 I++DDFGTG+++ L + ++IKID FV+ + T + I+ SI LA+A + V Sbjct: 645 EISLDDFGTGFSSLRYLHQFPLNVIKIDRSFVETLDLGTRERCIIHSIVTLARALGFATV 704 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE +ET+QQ L L QGY +P P Sbjct: 705 AEGIETRQQLEKLRSLECDSGQGYFFSKPIPGE 737 >UniRef50_A8FVX9 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVX9_SHESH Length = 817 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 110/546 (20%), Positives = 196/546 (35%), Gaps = 40/546 (7%) Query: 210 KEKRAFTLSWLAALSVLLLLLC-TPYENDFIAGYLVPVFFIIFTLGV-GKLRYPFLNLTW 267 K+ L L ++LL + I V + ++ P L Sbjct: 269 PLKQGLWLHALLPETILLQYSRDMSWLVTIITLSTVAFAIPLLIFLSHFQIIRPLNKLHH 328 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 A L L N + + L + S+ L N + A Sbjct: 329 AF--LRLGNNVELIQVKTSGDDELNELGKEFNRMSLKLF----------KSNEKIRELAF 376 Query: 328 TDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 DPLT LPN + + + +DN + ++ G + I Sbjct: 377 NDPLTGLPNRFMFTKHLNLSLESAKCDRGQLAVMFIDLDNFKHINDSLGHQSGDQLLHEI 436 Query: 380 CRTLLPLMQ---------ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 L ++ +++ + +L G E + L + + + + S+ I Sbjct: 437 GDRLHRNLRSKDFCEHFSDSDMVARLGGDEFTVFLGELPSINIAEKVAKRILEIISQPIL 496 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + + N T Q L+ + + +S Q + Sbjct: 497 LSGKSYYISASIGIACYPQNGVTTQELIKNADIAMYHAKKKGKG-GYQHFSDNLSRQNDE 555 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ + A++ LY QPI + + ++ + G + PDKF+PL + Sbjct: 556 FSVIEQKMHEAVENERFELYFQPIVDSNTHRIVSLEALIRWYDVEFGFIPPDKFIPLAEK 615 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L V+ + L + ++N+ + L A + + K I Sbjct: 616 NGLITVIGDWVIREACRQLKIWQDSGIVDIQLAINVSAIQLNNPKFAQELYQTIKNSGII 675 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + +E+TE + + +E L G R+A+DDFGTGY++ L+ L DI+KID Sbjct: 676 PGTLYIELTETTIINGEQEIFVTLEWLRSKGIRVALDDFGTGYSSLSYLRNLPIDILKID 735 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 F++DI + + +I+ ++ +A A VVAE VE + A L K G LQGY+ R Sbjct: 736 QSFIRDI-NDKNNNVILSAVIVMAHALGFKVVAEGVEERGHLAFLVKEGCDLLQGYMFSR 794 Query: 724 PQPLAD 729 PQ D Sbjct: 795 PQTADD 800 >UniRef50_C6AS31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Rhizobium RepID=C6AS31_RHILS Length = 781 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 170/449 (37%), Gaps = 23/449 (5%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 L++ + + + + ++ R H A D LT LPN L++ Sbjct: 329 LVALATHIAGIAI---ERKRVDDRIHFMAHHDDLTGLPNRAFLKERLASILDQARRNNRK 385 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL---- 405 + + +DN + ++ G ++ I + ++ ++ + +L G E L+VL Sbjct: 386 VTVAYIDLDNFKDINDGRGHAAGDEVLKEIATRMANSVRASDMVVRLGGDEFLVVLVHQS 445 Query: 406 -SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 RL+ + +N R I + + + F + T + LL + Sbjct: 446 SHDAGITRRLRELQKAIN-RPIRGADGEITITSSIGVAAFPFDGATSEELLANADRAMYR 504 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + E S + + A+ L L QP + G + Sbjct: 505 AKELGRNTLQH--HEGGSTPVGMPLGEHEELHQAITGDQLFLQYQPQVDVATGRITGLEA 562 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 ++ G + P F+PL + L L VL + +VN+ Sbjct: 563 LVRWNHPAKGRVPPVNFIPLAEETGLIVPLGLWVLNEACRQARQWQDMGLAPLTIAVNVS 622 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + A + +R+ + + + LE+TE NAE ++ +E L G R++ID Sbjct: 623 AKQFADPDFATHVAEALERHRLQSRWLELEVTESVVMQNAERALAMMETLRGLGVRLSID 682 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFG+GY++ LK D +K+D V+ + + I ++ LA+ LSV+AE VE Sbjct: 683 DFGSGYSSLAALKTFPFDRLKMDRSLVEALPGDKTAVAIASAVISLAQTLKLSVLAEGVE 742 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T Q L + + QG+ +P + Sbjct: 743 TDAQMDFLRQAHCEEAQGFRFSKPVSPEE 771 >UniRef50_Q0A846 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A846_ALHEH Length = 1052 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 95/470 (20%), Positives = 174/470 (37%), Gaps = 18/470 (3%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 +N+ + E + F L + + + + RR A D +T LP Sbjct: 572 FHNRRKTGELFWEAGVVFPLRDDQGGITHYIAIKQDVTERKDAERRLEYHATHDTVTGLP 631 Query: 336 NFRALEQAPEQEAG----------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 N E + L + ++ G + I L Sbjct: 632 NRALAMDRLETAVRRLAHRRGRGSGALLVLDLSQFRKINESLGHASGDELLCRIAERLQG 691 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWG 442 + ++ L + G E L++L T + + + L + + + + M Sbjct: 692 ALGPHDTLCRPGGDEFLVILPELRTARQAEQVAKALLATLKAPLVLADQEIFMDARVGVT 751 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F + LL Q+ + + + + + L +R AL+Q Sbjct: 752 LFPEDGTDSSTLLRNAYAALSQAKQVARGD-FRFFKPEANERAHRWLALEGRLRRALEQE 810 Query: 503 DLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 L L QP+ + G++ +L + G ++P +F+P+ + L VL Sbjct: 811 TLHLVFQPLVDARTLRPTGFETLLRWTLEEHGPVSPGEFIPMAEETGLIIPMGEWVLRKA 870 Query: 560 LKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + A R +VN+ P+ + + + +R + + + LEITE Sbjct: 871 CQQAARWRAQTGHCYRMAVNVSPIQITGSDFVATVRTSLRRTGLPAECLELEITERMLLG 930 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + +++ L G +++DDFGTGY+ L+++ ++KID FV+ Sbjct: 931 GQRRVLQSLQALRDLGVGLSLDDFGTGYSALSYLRQMPFSVLKIDRSFVQGAAAGPRGEQ 990 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ SI +A+ L VVAE VET+ Q ALL + G LQGY RP Sbjct: 991 LLCSIIGMAQGLGLRVVAEGVETEAQVALLQREGCDLLQGYHFARPMAAE 1040 >UniRef50_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q13PE1_BURXL Length = 728 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 116/563 (20%), Positives = 215/563 (38%), Gaps = 22/563 (3%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIA 240 R + + ++ RR + R ++ + +++ L P + Sbjct: 148 LRDLAALVLDKLEIRRLEMARRTSQFRFEKIAGTSPDAIICADEQGLTTFWNPAAEKLLG 207 Query: 241 GYLVPVF-FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVL 298 + I + + L A +L + ++ T + ++ Sbjct: 208 YRSDEILGRSIDLIAPEQFTARLYQLAAAGESLTEGRTVEMMVRAANGTMIPVELSGSMW 267 Query: 299 I-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----APEQEAGKSFC 353 ++R R A DPLT LPN L + A +E S Sbjct: 268 REDGRPRFGAILRDITERRQNEERLLRLAHIDPLTELPNRTMLREQVELALSKEMTASVM 327 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + ++ R L + + + ++ G E ++L G Sbjct: 328 MVDLDGFKDVNDSLGHSGGDAVLVNVARRLQACARSGDTVARMGGDEFAILLPGLPDAVE 387 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + S+ + + +++G F G+ T++ LL Q+ A Sbjct: 388 AGQIADSVIAAVSQLLTIDGQPVNIGASIGIAMFPGDGLTVRELLSSADLALYQAKAEGR 447 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + T + + AL + L+ QP + G + +L Sbjct: 448 -HCRRFFSADLREEATLRRAYQGELARALAHQEFELHYQPQVRLADSTLVGAEALLRWRH 506 Query: 528 YDGGIMTPDKFLPLIAQFNLSAR-FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 G++ P FLP I L A ++ + A R VNL Sbjct: 507 PQKGLLGPGAFLPAIEA-GLLAPRIGDWIISMACEQAAQWRSLVPDFRVGVNLFGAQFRT 565 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++A +++ + +++ P A+ LEITE + E + + +LH+ G IA DD+GTGY Sbjct: 566 GDLADKVLAALQAFNLPPAALELEITENIILRHDEHMLGPLRELHQRGVGIAFDDYGTGY 625 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 A+ LKR +KID FV+ ++ + DA I+R+I L + L V+AE VET +Q A Sbjct: 626 ASLSMLKRYPLSRLKIDQTFVRAMLESPPDAAIIRAILYLGHSFGLEVIAEGVETGEQAA 685 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K G + QG+L G+P P + Sbjct: 686 RLRKKGCETAQGFLFGKPMPAEE 708 >UniRef50_A1WTF5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTF5_HALHL Length = 823 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 91/432 (21%), Positives = 172/432 (39%), Gaps = 15/432 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE-------AGKSFCCLRI 357 L+ + + + + A D T LPN L Q + + + Sbjct: 363 LVELAEDVGFALDHSAQLQYLAEHDLTTGLPNRSWLLGRVAQGIRRASDSERFAVAFVDL 422 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G +R + L +++ +++ + G E L++L E+ ++ + Sbjct: 423 DRFKVVNDSLGHDAGDQLLRQVAERLGEMVRSGDEVGRHGGDEFLMLLHDLESTEQVAQL 482 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + + + + + + + G+ ++ ++ Sbjct: 483 VQRVLNRFRKPLRIDGREVAVTPSVGLSVYPGDAADADGMVRAADTAMHRAKDEGGNR-Y 541 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 E ++ + ++V L +R A + +L L+ QP + G + +L D G Sbjct: 542 RFFTEEMNREVRQRVELEAMLRNAEQRNELELWYQPQVALSTGQVVGVEALLRWHHPDRG 601 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 ++P +F+P+ + L V+ A ++NL L + Sbjct: 602 WISPGEFIPVAEESGLIGAIGEWVIGRACDQAAEWRGRGVLQVPVAINLSAAQLRGTGLP 661 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I R R + +A+ LE+TE F + + I +L G ++A+DDFGTGY+N Sbjct: 662 AVIQRALGRRSLPAEALQLEMTESLFFEDDVNVRTAIAELQSRGLQLAVDDFGTGYSNLG 721 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL IKID F+ + D +I R+I +A+ L +AE VE +Q LL + Sbjct: 722 YLKRLPLAKIKIDQSFIHGVPEEPEDCVITRAIIHMAQGLGLRAIAEGVERPEQLELLRQ 781 Query: 711 LGVQYLQGYLIG 722 LG +QGYL Sbjct: 782 LGCDEVQGYLFS 793 >UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Arthrospira RepID=B5VW83_SPIMA Length = 655 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 86/420 (20%), Positives = 163/420 (38%), Gaps = 19/420 (4%) Query: 324 LQALTDPLTLLPNFRALEQAPEQEAGKS---------FCCLRIDNLEFMSRHYGLMMRVH 374 ++ D LT L N + ++ ++ L +D + ++ G + Sbjct: 183 YKSTHDGLTDLYNRSYFMRELDEVVERAKEDPEYQFVVLLLDVDRFKIINDSLGHQVGDR 242 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNT 431 + + L + + +L G E ++ ++ + + I Sbjct: 243 LLEGVGERLRECIPPWHTVARLGGDEFAILFDDLNNLTQISQTAQNIQYHLQQPIILGEQ 302 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + + + +L Q+ + + + + ++ L Sbjct: 303 EVFSTVSIGIAISNVSYSNGKEILRDADTALSQAKSKGKACHV-IFNPTMHREAWDRMQL 361 Query: 492 LNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 N +R A+++ +L L+ QPI + E G + ++ G ++P +F+P+ + L Sbjct: 362 ENDLRHAIERQELQLHYQPIISLETLEIIGCEALIRWEHPKRGWVSPSQFIPIAEETGLI 421 Query: 549 ARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 VL S + L K P SVNL L + ++ + + P Sbjct: 422 QPIGEWVLRSACETLHRWQLMFPQGKQPFMSVNLSTYQLTNPQLVNKVQTILEETGCDPC 481 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE AE + + +L + G ++ IDDFGTGY++ RL +KID Sbjct: 482 RLKLELTESTIAEYAEVVVPQMRELSELGIKLCIDDFGTGYSSLSRLYHFPIHTLKIDRS 541 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F++ I + I +I +LA L V+AE VET +Q A+L G Q QGYL + Sbjct: 542 FIEGIDESQDQLKIAYAIVNLAHTLGLEVIAEGVETPEQMAVLQAWGCQLCQGYLFSKAV 601 >UniRef50_Q2BJL1 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJL1_9GAMM Length = 984 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 111/560 (19%), Positives = 209/560 (37%), Gaps = 36/560 (6%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 RDI S E+ LS S + D I Y+ P+F + Sbjct: 419 RDITQSRRDEEHIRLLSSTVEQS---TNEVIITDTDGIIVYVNPMFTENTGYLPEEAIGR 475 Query: 262 FLNLTWAVSTLCLLNYNQ--------------NFLQGVETEYSLAFILAVLISFSV---C 304 ++ + N + ++ + ++ + + Sbjct: 476 KSSIVQSGEMSAEFYRNLWETIKKDNCWKGEIINRKKSGEKFWQSMSISPIHDETGAISH 535 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLR 356 L + + + R+ QA D LT LPN A++ A + + Sbjct: 536 YLSLKSDITKQKEAERQLRYQAEHDLLTKLPNRPVLLAEMDSAIDDARNNHCFSAVLFMD 595 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +DN + ++ G + ++ + + L + + + +L G E ++ G +++ Sbjct: 596 LDNFKDVNDTLGHLSGDFLLQLVAKRLEQCISITDVIARLGGDEFAIIQRGIKSKHEPSV 655 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + ++ L +G + LL ++ A Sbjct: 656 LAEKVINAITTPFRVDDHLLHIGISIGITLIPEDGLETGMLLSNADMAMYEAKAISGSH- 714 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + + ++ L+ + + A++ +L L QP G + +L + Sbjct: 715 YKFFDHDLQLSIQRKRLIESHLHNAINNNELNLLLQPKIEIHTGHIVGAEALLRWHSTEI 774 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNI 589 G ++P +F+P+ + VL L+ + P+ +VNL + L N+ Sbjct: 775 GQVSPAEFIPIAEKSGQIIELGNWVLNQALQLIKDWCQKGYKIPKIAVNLSAVQLKDVNL 834 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I + + Y + + + LEITE A S+ E S + + +A+DDFGTGY++ Sbjct: 835 VQDIKKALEHYQVHSEYLELEITETAAMSDPEFSNSQLSAIKAMNITLAMDDFGTGYSSL 894 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L L D +KID FV DI + I+ SI L K + +V+AE VE +Q LL Sbjct: 895 SYLASLPIDRVKIDRSFVSDIQHSNEARGIIESIIHLGKILNKTVIAEGVEETEQLELLK 954 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 +LG QGYLI RP ++ Sbjct: 955 RLGCHEAQGYLISRPVASSE 974 >UniRef50_A3YI96 Sensory box/GGDEF family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YI96_9GAMM Length = 806 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 101/477 (21%), Positives = 196/477 (41%), Gaps = 27/477 (5%) Query: 275 LNYNQNFLQGVETEYSLAF-ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 L + + ++ ++ S+ +L + R + + + A D LT Sbjct: 314 LTIETLYRHSSGAVTPIEIRLIKYVLQESIEVLILARDISARKEAEDKINHLAYFDSLTH 373 Query: 334 LPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN + + E ++ + L +D + ++ G + ++ + Sbjct: 374 LPNRHWIMERLESSMEISRERKVKGAVLFLDLDRFKNINDSLGHDVGDLLLQVVANDFK- 432 Query: 386 LMQENEK-LYQLPGSELLLVLSGPETEGR---------LQHMVNILNSRQIHWNNTGLDM 435 ++ E + + +L G E + + E + Q +V N + + + + Sbjct: 433 VLAEGDICVARLGGDEFVFLFPFLEGDLDYINEKVAFFAQQIVQSFNKSKF-VGSHEMHI 491 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 FDG +E + LL Q ++ + + T ++ L + Sbjct: 492 SVSIGITLFDGFEENVGVLLKQADTALYKAKDAGRN-TYRFYKAEMQVLTDDRLKLEKAL 550 Query: 496 RTALDQGDLLLYAQPI--RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 A+ + LY QP E G + ++ D G + P +F+PL + L Sbjct: 551 HRAITHNEFELYYQPQNNVKGELLGAEALIRWHDGDNGFIPPAQFIPLAEEIGLIIELGE 610 Query: 554 QVLESLLKWLATHPCD---KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 V+E+ L+ K S+N+ P+ + RL +Y+I + +E Sbjct: 611 WVMENAFYQLSQWLKRDLWKPDWTLSINVSPIQFQHPEFLINLERLLLKYNIPATLIDIE 670 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE ++ ++S +E + G +++IDDFGTGY++ + LK L + +KID FV+D+ Sbjct: 671 ITENMLLTDLQASRLKMEHIRSLGMKLSIDDFGTGYSSLQYLKTLPIERLKIDQSFVRDL 730 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + ++ D IV ++ ++ A + V+AE VETQ+ L ++G QGYL GRP Sbjct: 731 LIDSGDEAIVGAVIAMSGALDIEVLAEGVETQEHLLRLEEMGCLNYQGYLFGRPVSA 787 >UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=Bacteria RepID=B4SHZ4_STRM5 Length = 710 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 137/685 (20%), Positives = 250/685 (36%), Gaps = 66/685 (9%) Query: 95 FVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIS 154 +V + + R W G +GI ++ FD P+ + Sbjct: 15 LLVAVMASYTALAMAGRTVTAPGKGAAWWWRLGGGFAMGLGIWSMHFIGMLAFDLPIPLG 74 Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA---------------QIL 199 D T++ L + + L+ R + P A + Sbjct: 75 -----YDLPITLLSLALAIASSVF--ALWLVSLRTLPHPRLAGGALLMGTGIAGMHYVGM 127 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF---------IAGYLVPVFFII 250 + P + + S + A++ L + A L+ + + Sbjct: 128 AAMRMQPGIDYDPGWLLFSLMVAVAASWTALYVAFRLRAQRTRVGDRLAAAGLLGLAIVG 187 Query: 251 FTLGVGKLRYPF------------LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 L W + +L + V + +L Sbjct: 188 MHYTGMAAARFPEGSICGAAVGDGLQSEWLAMLVVVLTVAILAVVLVVSWLDQRVEAQLL 247 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + L + + AL DPLT LPN L++ + + Sbjct: 248 RLRNSLLSTSLTD------AQQELTQAALHDPLTRLPNRLLLQRRIVQALAEAEQGGSRF 301 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL---SG 407 + + +D + ++ YG + ++ L++ N+ L +L G E +LV+ Sbjct: 302 AVMFMDLDGFKQVNDAYGHQAGDALLVAVAERTRQLLRPNDMLARLGGDEFVLVVRIEHD 361 Query: 408 PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + ++ + S + + L + + + + L+ Q+ Sbjct: 362 EDLPTLARRILQAVGSGPL-LADNELQVTASIGVAICPDHAASERQLMAFADAAMYQAKE 420 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 A + ++ +Q LL +R A+ L L QP ++ G + ++ Sbjct: 421 SGRN-AFVLFADWMNDSAEQQFRLLADLRRAIGSEQLFLNYQPKIRVATQKVAGAEALIR 479 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 + G++ PD+F+ L + L+ L G SVNL P+ Sbjct: 480 WRHPEHGLIPPDRFIRLAERSGAINDIGRWALDQACLQLRRWHDAGHEGWSMSVNLSPVQ 539 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 ++ + + +RY+I+P+ ++LEITE + ++S+ ++ L G I+IDDFG Sbjct: 540 FSSPHLLQDVREVIERYNIAPRHLVLEITESTVMRDTDTSLRLLQALSALGVGISIDDFG 599 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL A IKID FV+D+ + D +IV +I L A + +VAE VET Sbjct: 600 TGYSSLLYLKRLPATEIKIDHAFVRDLEHSAEDVVIVSAIVALGHALDMDIVAEGVETAA 659 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q+A L +LG YLQGYL+GRP A Sbjct: 660 QRAYLERLGCDYLQGYLLGRPVDAA 684 >UniRef50_B9QV87 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QV87_9RHOB Length = 777 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 95/433 (21%), Positives = 163/433 (37%), Gaps = 21/433 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + +R A DPLT LPN R ++ + + + +DN +F++ Sbjct: 331 ERDRAEKRIRYLADHDPLTGLPNRRKFKRKLEAKIEASRQTGEPVAVVFVDMDNFKFIND 390 Query: 366 HYGLMMRVHCIRSICRTLLPLMQEN-EKLYQLPGSELLLVLSGPETEGR-----LQHMVN 419 YG + + ++ +L E + + G E +L + GP L M Sbjct: 391 SYGHAVGDDVLSTVADRILGSHNITFETI-RFGGDEFVLFVDGPTAHKSELKDYLARMRA 449 Query: 420 ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + I + L + F + +T +L ++ E Sbjct: 450 EILKT-IELDTLTLHVTCSIGTAVFPLDGDTADEVLKNADQAMFEAKNLGRDNFFIFDRE 508 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 ++ L+ +R +D +L L QP + G + ++ + G + P Sbjct: 509 TAPAGVN-RLKLVEELRRGIDNNELFLEYQPQIDLMSGRIVGAEALVRWTHPERGRLMPG 567 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+ + Q VL + +VN+ K + + Sbjct: 568 EFIEIAEQTGAIISLGRWVLNEACRQNKAWQDAGLPHITIAVNVSANQFRDKALLSDVFS 627 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + LE TE N E ++ +E + G +AIDDFGTGY++ LK Sbjct: 628 ALDTSGLDARYLELEFTESLVIQNVEQAVALMEDFRRIGIHLAIDDFGTGYSSLVALKNF 687 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + +KID F++D+ D IVR+I L + L+VVAE VET +QQA L + Sbjct: 688 PLNRLKIDQSFIRDLEYKESDRAIVRAIISLGRELGLNVVAEGVETAKQQAFLLSCRCET 747 Query: 716 LQGYLIGRPQPLA 728 QGY GRP Sbjct: 748 TQGYHFGRPMAAD 760 >UniRef50_A7BZ46 Diguanylate cyclase/phosphodiesterase n=2 Tax=Beggiatoa sp. PS RepID=A7BZ46_9GAMM Length = 565 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 96/499 (19%), Positives = 168/499 (33%), Gaps = 59/499 (11%) Query: 284 GVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + + + M+ + + + A D LT L N A Sbjct: 51 RDRRIVWVKETVRAVRDNNGQISYYEGMLEDITQRKLTEEKLRYDATHDQLTGLFNRTAF 110 Query: 341 EQAP-------------EQE---------------------------------AGKSFCC 354 E + Sbjct: 111 TDELTKTLIRLKAEWKTENGYQDSESDVERENEKEVETDNETASFPLSPFSFPRYFAALF 170 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G ++ + I L M EN+ + +L G E L+ L Sbjct: 171 IDLDRFKIVNDSMGHLVGDELLTEIASRLDKEMTENDIVARLGGDEFALIFKHIPDLAGL 230 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + S+ + ET +L ++ Sbjct: 231 EQRTHQIQQQLSQPYFLKDETFKTTASIGIALSKPEYETADEVLRDADTAMYEAKRQGGG 290 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 + + + + + + +R A++Q LY QPI + G + ++ + Sbjct: 291 KFV-IFQPGMHTRVVNLLRMERDLRQAIEQQQFCLYYQPIIESATGKTIGLEALVRWIHP 349 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLL 585 + G++ PD F+PL + L L V E+ L ++N+ P+ L Sbjct: 350 EQGLIPPDLFIPLAEETGLIKELGLWVFETACFQLRQWQTQFIHHADLGMNINVSPIQLK 409 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q N + + ++ I +EITE N E +M + L K G + IDDFGTG Sbjct: 410 QPNFVHLVSDILEKTGIKSDTCRVEITENAMIQNPEGAMAILHDLKKLGVLLYIDDFGTG 469 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L++ D +KID F++ I + A I +I L +A L VVAE VE Sbjct: 470 YSSLSYLQQFPIDALKIDKSFIQKIDASVKSAQIAHAIIALGEAFGLKVVAEGVENNFHI 529 Query: 706 ALLHKLGVQYLQGYLIGRP 724 A+L +LQGY RP Sbjct: 530 AMLKATHCHHLQGYYFSRP 548 >UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1V4_BACS4 Length = 840 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 108/554 (19%), Positives = 212/554 (38%), Gaps = 39/554 (7%) Query: 205 APSLGKEKRAFTLS-------WLAALSVLLLLLCTPYENDFIAGYLVPVFF--------I 249 + EK+A + W +S ++ C+ GY + + Sbjct: 277 QRLVDNEKQARIIFNNLDEIIWSIDISSRKVIFCSNGFEQLF-GYCLDDLIDERQLWQKV 335 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL--- 306 I + + + L+ + + +I + Sbjct: 336 IHEEDIKGIPEKLITLSQGNQL----KFECRVQHTSAEVRWIEIKALPIIDDLGDFIRVD 391 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRID 358 ++R + L+ + H A D LT LPN R + A + ++ S L ID Sbjct: 392 GIIRDITEKKKLDAKMHHIAHHDHLTNLPNRRSFDIKLHELIHHAKKTKSIFSVFYLDID 451 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G ++ I L ++ ++ + + G E ++L E + Sbjct: 452 RFKHVNDMLGHNYGDDLLKEISYRLKQVL-QSHFIARTSGDEFAVLLHDVTEEEVIVFAH 510 Query: 419 NILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 NI+N + H + + + + E LL + Sbjct: 511 NIVNVMRQAFHISEVESYVTASIGIAFYPKDGENAVTLLKNADTALSFAKIDGKD-NYKH 569 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 ++ + L +R AL++ + L QP + K+ G + ++ GI+ Sbjct: 570 YIPEMNEDSHNIYFLEKDMRLALEKEEFYLEYQPKIDVKTKKVIGCEALIRWTHPKRGIV 629 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGR 592 +P +F+P+ + +L V++ + K L + S+N+ LL+ ++ Sbjct: 630 SPAQFIPIAEESDLICDIGNWVIKKVCKQLKKWHLEGINTVPVSINISAQHLLKTSLLDT 689 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I K H+SP + LEITE +S I L K G ++++DDFG GY++ + Sbjct: 690 IFTALKANHVSPSLLELEITETSLIQPNQSVFSTIRSLKKLGVKLSLDDFGVGYSSLTHI 749 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 ++ D +KID F+ + T DA+I+ SI ++A L+++AE VET++Q L + Sbjct: 750 RKFPLDTLKIDKSFISKVPTEKDDAVIISSIIEMAHGLGLTILAEGVETEEQLLFLEEKN 809 Query: 713 VQYLQGYLIGRPQP 726 ++QG+L +P Sbjct: 810 CDHIQGFLFSKPIS 823 >UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT05_CHRVO Length = 825 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 96/473 (20%), Positives = 176/473 (37%), Gaps = 19/473 (4%) Query: 274 LLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 L N N+L ++ ++++ + + + A DP Sbjct: 328 LWQGNVNYLHKNGKVLNIWESISIVPGPDGGVANYVLVFSDISSVLAAQEQLDYLAKHDP 387 Query: 331 LTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT L N R L+ ++ + + +D+ + ++ G + +I Sbjct: 388 LTNLCNRRMLQDRMEYELAQAMRRQKMMAVLLIDLDHFKTINDSLGHGHGDQLLATIATR 447 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGA 439 L ++ ++ + +L G E +VL E+ G + M L R + + Sbjct: 448 LQGSVRASDTVARLGGDEFCIVLGDIESPGDVDLMGQKLLQRLAEPVRLEQMVCYVTGSI 507 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + LL + + ++ + + + AL Sbjct: 508 GISMAPTDGMGVDELLRNADQAMYGAKHAGRNR-YCFFAPAMQKAAEVRLQISSGLHLAL 566 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +QG L QPI + + +L G++ P F+P+ + L A+ V Sbjct: 567 EQGQFRLEFQPIVDLSCGRIRKAEALLRWHHPQHGVINPAVFIPIAEECGLIAKICEWVY 626 Query: 557 ESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + L ++ + R ++N+ L R + R + +A++LEITE Sbjct: 627 DQALDFIRAWRDMLRDDLRIAINVSALHFRDLRNPVRWLDKLTRAGVPGEALMLEITESL 686 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 ++ G +IA+DDFGTGY+ LKR + D +KID FV I Sbjct: 687 LLDADHKVQEALDLYRAAGIQIALDDFGTGYSALSYLKRYRLDYLKIDQAFVGQIAEEPR 746 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D + +I +A L+V+AE VET Q A+L ++ QG+L RP P Sbjct: 747 DHALCEAIVVMAHKLGLNVIAEGVETPAQAAILQACRCEHAQGFLYSRPLPAE 799 >UniRef50_B1J9N2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pseudomonas RepID=B1J9N2_PSEPW Length = 533 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 96/426 (22%), Positives = 178/426 (41%), Gaps = 12/426 (2%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----QEAGKSFCCLRIDNLEFMSRHYGL 369 + A D +T LPN +Q Q G + L ID + ++ G Sbjct: 93 ELRSSQAQLERLAHYDTITGLPNRVLFQQQLADAILQGDGLAVLMLDIDGFKQVNDSLGH 152 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE--GRLQHMVNILNSRQIH 427 M ++ L + +++ +L G E + +L G + + ++ H++ L R Sbjct: 153 AMGDLLLQQATARFLQELASADRVCRLGGDEFVFMLRGTQGQVSHQVAHLLRCL-QRPFD 211 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N + + R + E + LL + A ++ + + Sbjct: 212 LNGSTALVTGSIGLARCPQHGEDVGSLLRHADTAMYAAKESGRN-AWRPYHTDMTARLQQ 270 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L +R AL + L+ QP + +G + +L G+++P +F+PL + Sbjct: 271 RLELERNLRRALQANEFELWYQPKVDLFSGCLQGVEALLRWRDPVHGLVSPAEFIPLAER 330 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L +VL +A + + ++N+ L + + + + + + + ++ Sbjct: 331 TGLIIPLGERVLALACAQMAAWRDEDRIPGPMAINVAALQIERSDYVSSLAQALECHGLA 390 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + +EITE + + + + QL G A+DDFGTGY++ L+ L D +KID Sbjct: 391 PSLLEVEITESLLMESQQQACEVLAQLQAMGVTTAVDDFGTGYSSLAYLRALPIDHLKID 450 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 F+KD+ + + R+I DL A + AE +ETQ+Q L G QGYL+ R Sbjct: 451 RAFIKDLPDDDDAVAVARAIIDLGHALGFRITAEGIETQEQYDFLRNAGCDQGQGYLLAR 510 Query: 724 PQPLAD 729 P P AD Sbjct: 511 PMPAAD 516 >UniRef50_A2SIL3 Signal transduction protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SIL3_METPP Length = 965 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 98/458 (21%), Positives = 183/458 (39%), Gaps = 13/458 (2%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYM-VRIYHRSEWLNRRWHLQALTDPLTLL 334 + N E + ++++ S ++ V RR D LT L Sbjct: 219 RFETNVRHHDGHEIPVDVSVSLVTSDGETFAHVCVDDLRDRRAAERRIQQLLQFDELTGL 278 Query: 335 PNFRALEQAP----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 PN + L + + A + L +D + ++ G + +R + + ++ Sbjct: 279 PNRQRLFEHLGATLQTSATTAVLVLELDRFKRINDGLGPQIGDAVLREVAGRIAATVRSV 338 Query: 391 EKLYQLPGSELLLVLSGPE--TEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + + G E ++V+ P Q ++ + +R + + + G + Sbjct: 339 DLVARRGGDEFVIVMPAPSVPAPHVAQTLLETI-ARPMTIEGHEIHLTCGIGIAMAPADG 397 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + LL + + EQ+ + +Q+ L +R AL L+ Sbjct: 398 DRADTLLRRANAALEQAKRLGRNQV-NVYAGAPHDDDPEQMALETALRHALRDEQFELHY 456 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L G ++PD+F+P+ + L VL ++ A Sbjct: 457 QPQVDLAQGRIVGVEALLRWQHPTLGRISPDRFIPIAEETGLIVPIGDWVLRHAIEQAAA 516 Query: 566 HP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R +VNL LLQ ++A RI L + P+ +E+TE N + ++ Sbjct: 517 WQRARLPPLRMAVNLSARQLLQPDLARRIEGLLAATGLDPRRFGVEVTESMLIGNFDQAV 576 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ L G +++DDFGTGY++ L+RL D++KID V D+ D I R+I Sbjct: 577 QHLRALRALGVEVSLDDFGTGYSSLSYLRRLPVDVVKIDRSLVPDVTAPAEDVSITRAII 636 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 +A + V+AE VE++ Q ALL +QG+ Sbjct: 637 TMAHQLQMKVLAEGVESEGQAALLAANQCDQMQGWWFS 674 >UniRef50_B3PKS7 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKS7_CELJU Length = 940 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 103/448 (22%), Positives = 185/448 (41%), Gaps = 20/448 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGK 350 + + + R+ A D LT LPN L Sbjct: 471 RGQITHFVDLFNDITHIKEHQRQLEHIAHYDALTHLPNRVLLADRMKQALLHSQRSGLSL 530 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ YG + + +I +++E++ L ++ G E ++VL+ E Sbjct: 531 AVMYIDLDGFKAINDQYGHDLGDQLLVAISSRFKSVLRESDTLARIGGDEFVVVLNELEQ 590 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 Q +++ L + + + L + + + + L+ + Sbjct: 591 PAAYQPVLDRLLATAADPLILRDQALRITASIGITLYPSDTADAEQLIRHADQAMYLAKQ 650 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILA 524 + T Q L IR AL+Q + +L+ QP N + G + ++ Sbjct: 651 RGKN-GWHLFDVDRDVATKHQYESLERIRLALEQREFILHYQPKVNMKTGALVGAEALIR 709 Query: 525 RLKYDGGIMTPDKFLPLIAQ--FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 G+++P +FLPLI + L V+++ L + + SVNL L Sbjct: 710 WQHPTRGMISPGEFLPLIEEHPIGL--DVGEWVIDTALSQIEHWQREGLALPVSVNLCAL 767 Query: 583 TLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L Q A R+ L + + ++P + LEI E A ++ + + G R A+DD Sbjct: 768 QLQQGRFAQRLSELLQAHPDVAPGQLELEIVETSALADMTDVANTMRACNALGVRFAVDD 827 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL A+ +KID F++D++ + D IV+ + LA+A V+AE VE+ Sbjct: 828 FGTGYSSLTYLKRLPAETLKIDQSFIRDMLDDPDDFAIVKGVISLAQAFHRQVIAEGVES 887 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L LG + QGY I RP + Sbjct: 888 VAHGEMLIPLGCELAQGYGIARPMLAGE 915 >UniRef50_D1U5D9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5D9_9DELT Length = 711 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 100/557 (17%), Positives = 208/557 (37%), Gaps = 29/557 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + L + + + SW+ + + I GY F L Sbjct: 151 EALLNSEQRYRMVADYNYDWESWIGPDGKAIY---ISPSCERITGYPPDRFIEDPDLMQR 207 Query: 257 KLRYPFLNL----TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM---V 309 + +++ S+ + ++ I + + L + V Sbjct: 208 IVHRDDIHIWHNYMADTSSGDDDGLDYRIHHRNARTKWVSLIKHAVADEAGNPLGVRVSV 267 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 R + + ++ +L DPLT LPN L + + +D + Sbjct: 268 RDVTHRKRMEQQLKHSSLHDPLTGLPNRALLLDRLSQAVERSARTDDYFGVLFINLDRFQ 327 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ H+G +M + I L +++ + + + G + ++++ + ++ MV I+ Sbjct: 328 AVNDHFGHVMGDRLLVEIGVRLSRVVRPVDSVARFGGDDFVVLIEEMPRKIDMRDMVRII 387 Query: 422 NS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 N T + + L+ ++ + Sbjct: 388 RDSFKEPFEVNGTDFPITASMGLEIARAES-DPESLVHNAQLAMYKAKESGKDR-YLVYD 445 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + + + N ++ AL + + QPI + + G++ + G+++P Sbjct: 446 ARMREGVVNVLAVENDLKRALRAHEFEAHFQPIVNLSDGQLYGFEALARWNHPQRGLVSP 505 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGR 592 +F+P+ + L +LE L+ G +VN+ + + Sbjct: 506 GEFIPVAEETGLIVELGAHILEYACTTLSQWRSRYPGAGNLVMAVNISAKQFGEAKLVTS 565 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + R + P + LEITE +A S + L G ++++DDFGTGY++ L Sbjct: 566 VKDILARSGLPPGLLKLEITETVVMLDAMESSVRLNLLKSLGVKLSVDDFGTGYSSMSYL 625 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 ++ D +KID FV+ + + I+R+I ++A + L VVAE +ET++Q+ LL+ L Sbjct: 626 QKFPVDQLKIDLSFVRLMEKGPENIEIIRAIVNMAHSLRLRVVAEGIETERQRDLLYSLQ 685 Query: 713 VQYLQGYLIGRPQPLAD 729 Y QGYL +P P + Sbjct: 686 CDYGQGYLYSKPLPRDE 702 >UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73380_SYNY3 Length = 732 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 89/435 (20%), Positives = 170/435 (39%), Gaps = 18/435 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEF 362 + + QAL D LT L N L Q E + + + +D+ + Sbjct: 290 IKLRKASQNQLSYQALHDTLTGLANRALLLQRLEFAGHQIKNNPKSRFALLFIDLDHFKL 349 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ +G + + I L ++E + +L G E ++ L + + + Sbjct: 350 INDSWGHSVGDALLIKIAEKLQINLRETDLAVRLGGDEFVIFLESITEIKQAIDVAERIL 409 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + L + + + L+ Q+ + + Sbjct: 410 IHLRLPVQIQAKELFVKASIGIVIGSIHYYEPERLIRDADIAMYQAKNNGRNQ-YAVFDP 468 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPD 536 + +++ L + R AL+Q L LY QPI N +G++ ++ + G + P+ Sbjct: 469 SMHQTILERLSLEHDFRKALEQETLELYYQPIISLVNDRLQGFEALIRWQHPEKGYINPE 528 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLLQKNIAGRII 594 + + + + L +++ + +A S+NL P + + I Sbjct: 529 QLIAIAEETGLIIILGQWIMQQACQQIAQWREITNDDKIYVSINLSPNQICRPLFVEEIE 588 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + A++LEITE + E ++++ G +I+IDDFGTGY++ L R Sbjct: 589 NILQTTKLDGDALVLEITEGVLIQHLEIVAECLKKIKSHGIKISIDDFGTGYSSLSYLYR 648 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L + +KID F+ I ++ IV++I L + VAE VET Q LL K+G Sbjct: 649 LPVNYLKIDRSFINQITEDSPSQSIVKTIITLGDLLDIQTVAEGVETNDQLNLLKKMGCG 708 Query: 715 YLQGYLIGRPQPLAD 729 QGY P + + Sbjct: 709 LGQGYFWSEPMTVRE 723 >UniRef50_Q07T95 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07T95_RHOP5 Length = 812 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 92/433 (21%), Positives = 164/433 (37%), Gaps = 24/433 (5%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLM 370 R A D LT LPN + +Q + + +DN + ++ G Sbjct: 358 QERIRELAFFDQLTGLPNRTCFIEQAQQVLDDAAAVRKRSALLFIDLDNFKTLNDTLGHN 417 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH----------MVNI 420 M ++ + LL + + + G E +++L + ++ Sbjct: 418 MGDMLLQQAAKRLLDCIDHTGSVARFGGDEFVVLLPALAATTEAEAELAAGAVAEAILQS 477 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 L SR T LL Q ++ A L Sbjct: 478 L-SRPYDLAGIVHSCPPSVGIALVGLAPTTFDELLQQADLAMYEAKAAGRN-TLRFFAPS 535 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKF 538 + +++ L +R L + L+ Q + G + ++ G + PD+F Sbjct: 536 MQATISQRRALEADLRDDLRVRNFELHFQAQIDVAGRLVGAEALIRWPHKRRGYVPPDQF 595 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 + + L V+E L ++N+ + L + ++ Sbjct: 596 IGIAETTGLILPIGNWVIEEACNRLKQWSARPGLANLSLAINVSAVQLHDEQFVDHLVAT 655 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +R P + LE+TE + + + +L + G R ++DDFGTGY++ L++L Sbjct: 656 LERTGADPNLLKLELTESVLIDCNDDVIERMNRLREKGVRFSLDDFGTGYSSLLYLRKLP 715 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 + +KID FV+DI+ + DA I + I L K L V+AE VET+ Q L ++G Sbjct: 716 IEQLKIDRSFVRDILVDANDAAIAKMIIALGKTLGLDVLAEGVETEGQLRELIEMGCDAY 775 Query: 717 QGYLIGRPQPLAD 729 QGYLI RP P+++ Sbjct: 776 QGYLISRPVPVSE 788 >UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89S23_BRAJA Length = 618 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 97/434 (22%), Positives = 185/434 (42%), Gaps = 18/434 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAPEQEA----GKSFCCL 355 ++ ++ R A D LT LPN A + E + L Sbjct: 170 YVVGVIEDVTEQLASQARISHLAHHDALTDLPNRSAFNAELDERLELAQEALTSFAVLSL 229 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ +G + +R+ L + + ++ G E ++++ + Sbjct: 230 DLDRFKEVNDVFGHPVGDMLMRAAADR-LAAEADGAFVARIGGDEFMILMPDNARREDML 288 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L +++ ++ +G + + LL ++ Sbjct: 289 TLAERLVEVIGKELEIDDYLSQVGVSVGIAVYPDDGVDAATLLANADSALYRAKREGRAR 348 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKEGEGYDEILARLKYDG 530 E + + LL + +R AL+Q L++ QP + E G++ +L Sbjct: 349 V-RFFESETDQELRDRRLLQHDLRQALEQNQFLVHFQPQARMDGEVIGFEALLRWNHPTR 407 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G + PD+F+PL + L + VL + A+ P + + +VNL P+ + ++ Sbjct: 408 GFVPPDRFIPLAEENGLIVQIGEWVLREACREAASWP---RPLQVAVNLSPVQVQAGDLE 464 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I ++ ++P + +EITE + ++ + +L G RIA+DDFGTGY++ Sbjct: 465 RSIHQILLETGLAPTRLEVEITEGVLIGDFTRALNLLRRLKALGIRIAMDDFGTGYSSLS 524 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+ D IKID F+ ++ A IVR++ LA A ++ V+AE VET+ Q+A L + Sbjct: 525 YLQSFPFDKIKIDRSFISNLEATPQSAEIVRAVLSLAHALNIPVIAEGVETEAQRAFLAR 584 Query: 711 LGVQYLQGYLIGRP 724 + +QGYL+GRP Sbjct: 585 EACEEMQGYLVGRP 598 >UniRef50_Q7UTZ4 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UTZ4_RHOBA Length = 614 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 88/422 (20%), Positives = 171/422 (40%), Gaps = 17/422 (4%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 AL D LT L N + + +D + ++ G Sbjct: 182 AELERVALHDGLTGLANRIKFNDRLRDSLANANSQPPAVLLIDLDQFKLINDTLGHPAGD 241 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNN 430 IR + + L ++ + +L G E +VL T+ ++ + + + S + + Sbjct: 242 ELIRIVGQRLSAVVGAAGLVARLGGDEFAVVLDHNPTQRTIESIADGIQSSVAEPVLLDG 301 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + L+ ++ A A E+ + Q ++ + Sbjct: 302 VPFSVTASIGICGSPDENCDADELIRNADIAMYRAKADGRDCA-RYFEKGMDQQLRQRQM 360 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + +R A+ + +L+ QP+ + K+ ++ +L + G++ P F+PL + L Sbjct: 361 MEANLRAAIANDEFVLHFQPLLDPNTKKVCSFEALLRWEHPERGLVPPLDFIPLAEETGL 420 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 + VL K P R +VN+ + + + ++ I+ + + Sbjct: 421 IRQIGDWVLLEACKEACNWPE---HIRVAVNVSAIQFRGGTLPKSVSDAIEQSGIAGERL 477 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 +EITE + ++ + L G RIA+DDFGTGY++ L+R + D +K+D FV Sbjct: 478 EIEITESVLMGESLDALDQLHALRAQGVRIALDDFGTGYSSLSYLRRFRFDKLKMDRSFV 537 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +++ IV +I +L K ++ AE +ET+QQ + + G +QGYL GRP P Sbjct: 538 QNLNQ-ADAMAIVSTIANLGKCLGMATTAEGIETEQQMRCVMEHGFTEVQGYLYGRPIPS 596 Query: 728 AD 729 + Sbjct: 597 TE 598 >UniRef50_Q0A9N6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9N6_ALHEH Length = 696 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 94/473 (19%), Positives = 174/473 (36%), Gaps = 20/473 (4%) Query: 275 LNYNQNFLQGVETEYSL---AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + + + + + + + +V RR + D L Sbjct: 207 YDIEHRIQRPDGSVRIVHQKGTVAFDADGRPLRMAGVVHDITEMREAERRLQYLSHHDVL 266 Query: 332 TLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN + Q + + +D ++ G ++ + R L Sbjct: 267 TELPNRTLFQIRLRQAISEAQAEKGCFALVHIGLDRFRSVNEGVGHHAGDQVLQQVARRL 326 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 ++ E L +L G E ++L+G + + V+ L + + A Sbjct: 327 EACLRPGETLARLGGDEFAVLLAGAGDDAEVAAGVDRLLAPLQELFRVGEDEFYVPGSAG 386 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + + L+ + ++ L ++ + +V L + +R A+D Sbjct: 387 VALYPHDCSSPGELMQRAEAAMHRAKQEESTR-LAYYSAEMNQRARARVALESRLRRAVD 445 Query: 501 QGD-LLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 + + L QP G + +L + +G + +P F+P++ Q L ++ Sbjct: 446 RMEGFYLDYQPRVETATGRIIGLEALLRWREGEGPVHSPATFVPVLEQTGLIMELGEWIV 505 Query: 557 ESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + + +VNL + G I + P + LE+TE Sbjct: 506 GEACRQARAWRQAGLPPVQLAVNLAAPQFRDPAMPGIIEGALGEAGLPPGNLELEVTESM 565 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 S + + Q G R+A+DDFGTGY++ L+R D++KID FV D+ + Sbjct: 566 LMREVTSVIDTLGQFRDMGVRVAMDDFGTGYSSLAYLRRFPIDVLKIDRSFVNDLYADES 625 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A I+R+I LA + VAE VE +Q A L + G +QGYL RP Sbjct: 626 GAAIIRTILSLADNLGMESVAEGVERPEQHAFLCREGCHAVQGYLFSRPASPE 678 >UniRef50_D2UAD2 Hypothetical c-di-gmp phosphodiesterase or signal transduction protein n=1 Tax=Xanthomonas albilineans RepID=D2UAD2_XANAL Length = 864 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 98/430 (22%), Positives = 175/430 (40%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSR 365 E R H A D LT LPN +AL A + + + ID + ++ Sbjct: 421 EREQTKERVHQLAFYDALTNLPNRVMFSARAEQALADAEYHGSPVAILFVDIDRFKRVNE 480 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G +R I + L M + L + G E +++L E +L + Sbjct: 481 TQGHHAGDGLLRDIAQRLTEEMGVTDLLSRQSGDEFVMMLPQCGAEQAAGTAERLLLALA 540 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + L F + + ++ LL ++ + ++ Sbjct: 541 EPVVVGHVTLHPSASIGVAMFPEDGDDIETLLRHADLAMYRAKDEGGG-SFRYFSSDMNR 599 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR----NKEGEGYDEILARLKYDGGIMTPDKFL 539 ++V L +R AL Q +L L+ QP G + +L + G ++P +F+ Sbjct: 600 MAQERVALETALRDALHQNELQLHYQPQVFSQAPHALYGVEALLRWEHPNLGNISPARFV 659 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L L + +A PR +VNL + + R+ ++ Sbjct: 660 PMAEECGLIEELGQWALREACRQMADWRLRGIPVPRVAVNLSANNFAEPQLPARVEQMLS 719 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 Y + + LE+TE SN + + N+ QL G +++DDFGTGY++ L +L + Sbjct: 720 AYGLVADDLALEMTESVMLSNTAAVLDNLRQLQSSGVLLSLDDFGTGYSSLSHLHQLPIN 779 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +K+D FV+D+ + + S+ + + + VAE VET Q++LL +LG LQG Sbjct: 780 ELKLDMSFVRDLEHSPTSRALTTSVLRIGETLGMHTVAEGVETDAQRSLLAELGCGVLQG 839 Query: 719 YLIGRPQPLA 728 +L R P + Sbjct: 840 FLFSRALPAS 849 >UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CC56_ACAM1 Length = 787 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 180/442 (40%), Gaps = 33/442 (7%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQEA------------------GKSFCCLRID 358 + +AL D LT LP+ + +++ + L +D Sbjct: 328 RTAEQLKQKALFDNLTGLPSRDYFYEQLQRKLQQVQRQQLEGYSRQAELCHFAILFLDVD 387 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + + ++ G + + +I + L ++ + L +L G E ++L G + +V Sbjct: 388 HFKLVNDSLGHSVGDQLLVAIAQQLKESLRPQDLLARLGGDEFAILLDGVVNHQQAHKIV 447 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + ++ + N + + + LL ++ AH Sbjct: 448 QRIQRSLAKPLKLNQQEVFTSVSIGITHSTSLYQHPEELLRDADTAMYRAKAHGRG-GYV 506 Query: 476 SREEMVSGQTTKQVLLLNTIR---TALDQGD--LLLYAQPIRNKE---GEGYDEILARLK 527 +E + Q ++ L N++R A++QG LL QPI G++ +L Sbjct: 507 VFDETMHKQVRSRLWLGNSLRYAVKAIEQGQNPFLLQYQPIFCLRQQRLIGFEALLRWHH 566 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQ 586 G+++P+KF+P+ + L VL++ + LA + S+N+ LQ Sbjct: 567 PQQGLISPEKFIPVAEETGLIIPLGQWVLKAACQQLAVWEQEFSVPLTMSINVSSQQFLQ 626 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N + L + + ++ + LEITE + +EQL G +++DDFGTGY Sbjct: 627 PNFVQSVESLMQSHQLAGHHLKLEITETVLMESTHYVTDRLEQLQNLGISLSLDDFGTGY 686 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L L + +KID FV I IV++I LA ++VVAE +ET +Q Sbjct: 687 SSLNYLYNLPINTLKIDRSFVWGIGQGQD--QIVKTIIALAHGLEMNVVAEGIETIEQMQ 744 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 LH LG + QGY RP Sbjct: 745 YLHTLGCELGQGYWFARPLQPE 766 >UniRef50_Q48MD9 Sensory box protein/response regulator n=5 Tax=Pseudomonas syringae group RepID=Q48MD9_PSE14 Length = 705 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 100/557 (17%), Positives = 210/557 (37%), Gaps = 36/557 (6%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 + +R T+ + ++ L+ T +F + +L + Sbjct: 142 QLQQRTIDLERFRTVMDASEDAIFLINRNTMSLIEFNRRACQ-----LLGYTAEELAHKT 196 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---------------CLLY 307 S L + G L + V ++ Sbjct: 197 PAELGETSMENLEVVYDQIIAGKGPSEPLETQIRDKSGRDVEVEIHRQAYRTGEDWVIVG 256 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDN 359 +VR R + ++R D LT LPN + + + + +D Sbjct: 257 IVRDITRRKESDQRLLTMTHYDALTGLPNRDLFFTSLQMGVTQAAISRWKLAALTVNLDG 316 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ +G ++ + + R L + ++ L ++ G + L+L + + + ++ Sbjct: 317 FKNINETWGHVLGDEVLLEVSRRLSECLNASDTLGRVDGDQFALILMLRDGQADTRQTLD 376 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + M + + E + L+ + Sbjct: 377 RIRNALRVPFQLEGQSIVMTASIGIALYPEDGEDSRELIKHAYTAMNSAKKIG-PDTYRF 435 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 ++ + ++ L +R A+ + + QP + G + +L + + Sbjct: 436 YTAQMNADVSARLDLEAALRDAVQKQAFEIVYQPKLNLTDNRVCGLEALLRWPRPGQSGI 495 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGR 592 +P F+P++ L V++S+ +A G + +VN+ + ++ Sbjct: 496 SPAVFVPVLESLGLIGEVGNWVVDSVCAQIARWQRSGLGSFQVAVNISGQQIYSSSLVAD 555 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + +++ ++PQ + +E+TE N ++ + L G I+IDDFGTGY++ L Sbjct: 556 IRQALEKHKVAPQWLEVELTESSLMENTSHTIATLGALRANGVSISIDDFGTGYSSLAYL 615 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 +R D +KID F++++ +N DA I R+I +LA + L V+AE VET +Q A L + Sbjct: 616 RRFPIDKLKIDIAFIREVTSNPQDAAIARAIIELAHSLDLKVIAEGVETPEQLAFLRENH 675 Query: 713 VQYLQGYLIGRPQPLAD 729 +QGYLI +P PL + Sbjct: 676 CDQIQGYLISKPLPLGE 692 >UniRef50_Q0K510 Predicted signal transduction protein containinga membrane domain, an EAL and a GGDEF domain n=2 Tax=cellular organisms RepID=Q0K510_RALEH Length = 1085 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 94/438 (21%), Positives = 173/438 (39%), Gaps = 16/438 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCL 355 + ++ AL DPLT LPN L + + + L Sbjct: 621 GYQAIGYDLTERLRVDEYIRHLALHDPLTGLPNRAELSERAQALLLYARSHGERVALLLL 680 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ G + +R++ L +++ + + ++ G E +VL G + + Sbjct: 681 DLDHFKHINDSLGHPVGDDVLRTMADRLKGAVRQGDLVARMGGDEFGVVLGGLRHDSEAE 740 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + +R ++ L + + + ++L LL + Sbjct: 741 LIAAKIQARVNEELQAGGQRLRVTPSIGMAIYPDDGDSLTELLKAADSAVYAAKHDGRAQ 800 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 L ++ + + + +R AL + L QPI + G + ++ + Sbjct: 801 -LCRFASAMAEASLARFTIEGLLRRALAGDEFRLRYQPIVDAATLAITGVEALITWNTPE 859 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKN 588 G M P +F+P+ Q L A L + + + +VN+ PL L Q N Sbjct: 860 RGAMQPAEFIPIAEQSGLVAPLGEWTLATACREIQALRQALGSEIEVAVNISPLQLRQAN 919 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++ + PQ +++E+TE E+++ +L + G ++IDDFGTGY+ Sbjct: 920 FPDTVAHCLQQAGLPPQGLVIEVTEGILVDGGETTIETFRRLRELGVGLSIDDFGTGYSG 979 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L RL +KID FV D+ T D + +I L L V+AE VET Q L Sbjct: 980 LNYLTRLPISRLKIDKSFVDDVATPGHDQAVAAAIIALGHQLHLKVIAEGVETAAQFEFL 1039 Query: 709 HKLGVQYLQGYLIGRPQP 726 G LQG+L + P Sbjct: 1040 RAQGCDGLQGFLFSQAVP 1057 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 561 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 102/493 (20%), Positives = 184/493 (37%), Gaps = 32/493 (6%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM---VRIYHRSEW 317 P + ++ + L Y + A +L + R + Sbjct: 458 PMHTVLKTGKPASVIKH----LDEKNKTYEIQ--AAPYFDDMGNILGVIESFRDITKRLE 511 Query: 318 LN-------RRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFC--------CLRIDNLEF 362 + R+ + D T LPN L Q ++ L +D + Sbjct: 512 VENSLVEHERKIYDLTHYDSATGLPNRSVLIDRLNQAIYRALFNNSSLALLSLTLDRFKK 571 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + ++ I + L L ++ L + GS+ L++ G + + + + + Sbjct: 572 INETMGHHVGDCLLQEIAQRLKKLTCDHSSLAKDSGSQFFLLIEG-DPKEVVFDFADEVL 630 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + N L + + E LL + S A+ + Sbjct: 631 TEVKQSFFANGQELIPSGSIGIAFYPDHAENATELLARADVAMRLSKDDMGGGAVMVYDP 690 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 + + + ++ AL+ L L+ QP + + G + ++ G ++P Sbjct: 691 KYGEVAPQSLRMEADLKHALENNQLHLHYQPQFDLKNAGLVGVEALIRWNHPTEGPVSPG 750 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIR 595 +F+PL + L VL + + +VN+ L L + N + Sbjct: 751 EFIPLAEETGLIHPLGRWVLREACRQAKFWQNNFARIVPVAVNVSSLQLKKNNFVHVLEE 810 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + I PQ + LEITE E SM + + GF +AIDDFGTGY++ LK+ Sbjct: 811 CLNEFQIDPQLIELEITESAVMDRLEKSMELLNAIKGLGFNLAIDDFGTGYSSLSYLKKF 870 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +KID FV D+ T+ DA I+ +I +A + L +AE VET +Q+ L G Sbjct: 871 PFSKLKIDRSFVMDLETDENDAAIITAIISMATSLGLKTIAEGVETVEQKHFLTDHGCDE 930 Query: 716 LQGYLIGRPQPLA 728 +QG+L+ RP Sbjct: 931 VQGFLLSRPLSAD 943 >UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TM92_ACIAC Length = 724 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 106/434 (24%), Positives = 181/434 (41%), Gaps = 21/434 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------------EAGKSFCCLRIDNL 360 R N + QA DPLTLLPN E + +D Sbjct: 258 RLTEANAQLQKQAFADPLTLLPNRLLFEDRLSHALLRLDRMRRRDAGQRLGVMFVDLDGF 317 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ +G +RS L +E++ + ++ G E LL+L + N Sbjct: 318 KPINDSFGHAAGDAILRSAAERLRLQARESDTVARVGGDEFLLLLENVNDPADCLAVANR 377 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L + + + + + + E L+ + Sbjct: 378 LLNSLGQPFEVAGKTVQIACSVGIVVYPDHGER-DKLVANADAAMYAAKRAGGN-GYAMF 435 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 E + T Q+ L + +R A+ +G+L L+ QP + G + +L G ++ Sbjct: 436 ESHMDSDATAQLSLQHDLRQAIARGELSLHYQPKIDARRGRINGVEALLRWRHPLRGNVS 495 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 P +F+P+ +F L A+ V+E + +A D R ++NL L + +A RI Sbjct: 496 PAEFIPVAERFGLIAQLGNWVIEEACRQMAAWSWDGLRMRVAINLSAYQLRESGLADRIR 555 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +R+ + ++ EITE A + ++ IE+L + G ++IDDFGTGY++ L+ Sbjct: 556 DALQRHGVPASHLLCEITESVAMEDTRATQRAIEELGRIGVYLSIDDFGTGYSSLHYLRS 615 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L A +KID FV+D+ +V ++ LA A L VVAE VET+ Q+ +L + Sbjct: 616 LPARQLKIDRSFVRDLEEQEDARAVVDAVVRLAHALGLRVVAEGVETEGQRDILAAMHCD 675 Query: 715 YLQGYLIGRPQPLA 728 LQG+ RP P Sbjct: 676 ELQGFYFARPMPAD 689 >UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPW4_9GAMM Length = 837 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 89/462 (19%), Positives = 185/462 (40%), Gaps = 17/462 (3%) Query: 283 QGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T Y + + + + + R A D LT LPN + Sbjct: 364 RKDGTIYPEWLTITAVEDEAGQICQYASIFSDLTEIKKSEARIKRLAYFDELTRLPNRKL 423 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 E + L +D + ++ +GL +R + R + ++ E + Sbjct: 424 FNDRLHLSLGYAQEHGHKAALAFLDLDFFQRVNDRFGLDAGDQVLREVGRRIENVLCEGD 483 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G ++L+ E + + + L + I + +++ F + Sbjct: 484 TVARFGGDSFNMILTDVEDDQAVSEYLTRLLEVVNQPIMVAGSDINLTVSIGVSFFPSDA 543 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L +Q+ + + + + A++ LY Sbjct: 544 TDAEDLFQCAEAAVKQAKDFGRN-SYRFFSSEQHRLVQSRYRMSGDLHRAIETDQFQLYY 602 Query: 509 QPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 QP + + G + ++ + G + P +F+PL + VL ++ Sbjct: 603 QPKVDLQRQTVGAEALIRWSHPELGFIPPGEFIPLAEDLGFIDQIGHYVLCEAVRQAKEW 662 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 + ++N+ + ++++A ++++ ++Y P + +E+TE + + Sbjct: 663 YDQGLSVQVAINVSAKQMQRRDMAEEVLQVVEQYSCPPHLLAVELTETSFLHCLDETRAT 722 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 I++L G IAIDDFGTG+++ ++ + D++KID F+ +I + +D IV SI ++ Sbjct: 723 IKKLRDAGISIAIDDFGTGFSSLSYIRNIDMDVLKIDRSFLINIENSDVDRTIVSSIIEM 782 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++A L VVAE +ET+ Q A+L L +QGYLI RP P Sbjct: 783 SQAMGLQVVAEGIETETQFAMLKALNCDQIQGYLIARPMPAE 824 >UniRef50_B1Y3L9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3L9_LEPCP Length = 704 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 95/485 (19%), Positives = 181/485 (37%), Gaps = 26/485 (5%) Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVL----ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 G + + V+ + ++ + R + + Sbjct: 205 GISSGYESEHRMRCGDGSYVWVLEGGRVVQHDEAGRPMRMIGTLSDISRRKEAEAQAFSL 264 Query: 326 ALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DP+T LPN R L + + + C + +D+ + ++ +G + +R Sbjct: 265 AFYDPVTELPNRRRLVELLRFSLVGDQLGQGSATLCLVDLDHFKLVNDAHGHDVGDQLLR 324 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPE--------TEGRLQHMVNILNSRQIHWN 429 + L +++ + + +L G E ++L + + + Sbjct: 325 QVAVRLKACVRQQDIVARLGGDEFAVLLMHERRSAVSPAAAAEAAGAKLLAVLAEPYAIG 384 Query: 430 NTGLDMGYGAAWGRFDGN-QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + D + E + LL ++ L + + + Sbjct: 385 DHLHHCSASMGVVAVDADKAEQAEQLLKWADIALYEAKRAGRG-CLRFFDPAMQAAVEAR 443 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFN 546 L +RTAL L Q G + ++ G++ P +F+ L + Sbjct: 444 SALEAELRTALACRQFQLVYQLQVGDRSAALGAEALVRWHHPQRGVIGPTEFIALAEETG 503 Query: 547 LSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L +LE + + L D ++N+ L + + ++ R Sbjct: 504 LIVPLGRVLLEQVCEQLCAWERDADLDDLTVALNISARELHEPDFVDFVLATLARTGAPV 563 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LE+TE + + + +L G ++DDFGTG+++ LKRL D +KID Sbjct: 564 RRLKLELTESALVGDVDDIAARMHRLRDHGVGFSLDDFGTGFSSLSYLKRLPFDQLKIDR 623 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+DI+ +T+DA + R+I LA + LSVVAE VE Q +L + G + QG+L G P Sbjct: 624 SFVRDILEDTVDARLSRAIVALAASLGLSVVAEGVELAAQGDMLREFGCRQFQGFLYGVP 683 Query: 725 QPLAD 729 P A+ Sbjct: 684 MPAAE 688 >UniRef50_B8FI78 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI78_DESAA Length = 858 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 106/551 (19%), Positives = 203/551 (36%), Gaps = 30/551 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 ++ R A + R + L+ L T ND + L F + Sbjct: 310 AVYSRLPAGFIRAVGRQRICPE-SGLAAAAYLGETILVNDASSNPLWDNFRSLAQEHGLH 368 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 Y L+ L +++ E LA + AV SV + Sbjct: 369 ACYAAPILSGKGQLLGVISLYYKE-SVDPAEEDLALLKAVTDLASVAI--------EKVR 419 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGL 369 L QA D LT L N AL + A E + + +D + ++ G Sbjct: 420 LTETLVYQARHDDLTGLANRGALREWLERSLNAAKRYEEMLALLYIDLDRFKQVNDSLGH 479 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQI 426 ++ ++ + LL ++++++ L ++ G E +L S E++ M + Sbjct: 480 VVGDQLLKEVVSRLLRIVRDSDILARMGGDEFVLAASRLESKEDALGMGRRIRQIFREPY 539 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + L + F + + L+ + L E + Sbjct: 540 RIQDHELYLDASIGISFFPEDAQDAGKLIRHADTAMYYAKIRGGNR-LAEFEPQMKMAVL 598 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 +++ + N +R A++ + L+ QP +K G++ ++ + G + P KF+PL Sbjct: 599 ERLEIENDLRKAIENKEFELFYQPQYELASKRLIGFEALIRWNHPELGRIPPLKFIPLAE 658 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L V+ A G + SVN+ + + ++ + + Sbjct: 659 ETGLIIPIGEWVVHEACAQNARWAKAGYGSFKVSVNVSSVQFADEGFLDVLVSALNKSGM 718 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + +E+TE + +S + + G AIDDFGTGY++ L L D +KI Sbjct: 719 ESHHLEIELTESILVKDVKSIANMLSGVKSLGATTAIDDFGTGYSSMSYLHDLPIDCLKI 778 Query: 663 DGVFVKDIVTNTLDAM----IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 D FV + +T + ++ I +++ L+V+AE + +QQ L K+G QG Sbjct: 779 DRSFVINTGDDTFASERKRNLLSKIVEMSHDLGLTVIAEGFDNKQQFDYLVKIGCDVGQG 838 Query: 719 YLIGRPQPLAD 729 + +G P + Sbjct: 839 FYLGVPMSAPE 849 >UniRef50_C1F295 Cyclic diguanylate phosphodiesterase/diguanylate cyclase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F295_ACIC5 Length = 806 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 116/677 (17%), Positives = 227/677 (33%), Gaps = 48/677 (7%) Query: 67 VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 ++ + + + Q + + + A W+ R G+ Sbjct: 143 MVIALLIMLWIVYEIRAGQAILGVYGTLTEIFAINAWFYWRDFRRASAGV---------- 192 Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 + + F L ++ ++ + ++ F F + Sbjct: 193 -------LTAVLGLLAWALVFPAALVVAAWWPHLHVSSELWNIPKYFVE-------FGMI 238 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 ++ A D + L L + GY Sbjct: 239 LTLLEEEIQAANRTSEDYRVLFENNPSPMWIY----DLETLRFLRVNDAAQHVYGYSEEE 294 Query: 247 FF---IIFTLGVGKLRYPFLNL-TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F ++ ++ ++ + + + G +++ +A Sbjct: 295 FRQMTLMDIRPQEEVPRMLEDVGLEREEMVFSGPWTHVYKDGRQSKVEVAAHTIHFNGRM 354 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 +V E L+++ QA D LT LPN L+ Q+ +F C Sbjct: 355 ARFCLVVN-VTEREELHQQLLYQAHHDLLTGLPNRLLLKDRMQQTLTRASRQDRRVAFVC 413 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ +YG ++ C++ + L ++ + + + G E + VL ++ Sbjct: 414 IDLDRFKQINDNYGHLVGDQCLKLVAERLRRRLRGEDTIARSGGEEFVAVLGELKSRQDA 473 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + L L++ + + L +S Sbjct: 474 YRVAEDLLYVFHEPFLVEGYRLELPASIGVALYPDDGTDASDLWRNADIAMYRSKKSGGN 533 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYD 529 + +S + L +RTAL +G +Y QP + G + +L Sbjct: 534 R-FTFVSDEISSAAAEANDLELMMRTALKEGGFEVYYQPQYLEDGTLCGMEALLRLHHPR 592 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKN 588 G++ PD+F+P+ L VLE + + R +VN+ PL + + Sbjct: 593 SGMILPDRFIPVAEDSGLIMPIGNWVLEEVARQFMAWSQAGLPQVRIAVNVSPLQFMHSD 652 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 G + R+ R + + + LE+TE N E + +L G ++DDFGTGY++ Sbjct: 653 FLGHVQRVLARSGMPAELLELEVTETTVMRNIEEIARQMRELAALGVHFSVDDFGTGYSS 712 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L +L +K+D FV+ I IV++I LA + + VVAE VE + Q +L Sbjct: 713 LRHLHQLPIKTLKVDRSFVERITETNGTYSIVQAILSLAHSLGMQVVAEGVERKDQFEVL 772 Query: 709 HKLGVQYLQGYLIGRPQ 725 L QGYL P Sbjct: 773 KALQCDVFQGYLFSYPL 789 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 104/481 (21%), Positives = 185/481 (38%), Gaps = 24/481 (4%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--CLLYMVRIYHRSEWLNRRWHL 324 A+ +L L VL L+ R Sbjct: 406 AAIKKRGVLTEEHPISTKDGLRLFLTRRATVLGDGGEPQYLIKTYEDVTDRRQTESRMAH 465 Query: 325 QALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT LPN A QA Q + + + L+ ++ +G + + Sbjct: 466 MAYHDGLTDLPNRAAFLQALSQMIEACADTGEEFAVLNVDLKGLKDVNDVFGHAIGDKLL 525 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE--GRLQHMVNILNSRQIHWNNTGLD 434 + R + + + + +L G E L++ G + E L + + + + Sbjct: 526 IEVARRVHTVARGG-VVARLSGDEFGLIIDGKQPETGRALAEQLAAAIAVEFQIEGKSIR 584 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 F N LL ++ A ++ E + Q + +L Sbjct: 585 TALTTGISVFPHNGPDPASLLANAGAALFRAKARSRG-SITFYEPEMDQQIRDRRVLHQE 643 Query: 495 IRTALDQGDLLLYAQPIRNK-------EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + A+ G+L LY QP + E G++ + G + P F+PL + + Sbjct: 644 LSVAIKNGELSLYFQPQASSGRTVDCSEIIGFEALARWHHPVRGFVPPSDFIPLAEESGM 703 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 +L + A+ P K + +VNL P + ++ + + +SP + Sbjct: 704 IVEMGEWILREACREAASWP---KPLQVAVNLSPAQFVHGDLVALVHSILLETGLSPGRL 760 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE + + + + +L G R+++DDFG+GY++ L+ D IKID FV Sbjct: 761 ELEITEGVLIEDFDRGVALLRRLKALGVRVSMDDFGSGYSSLSYLQAFPFDKIKIDRAFV 820 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++ N A I+R++ L ++S+VAE VET +Q L + G +QGYL+G+P P+ Sbjct: 821 MNLGRNPQSAAIIRAVIGLGHGMNMSIVAEGVETPEQLGFLAEQGCDSVQGYLLGKPLPI 880 Query: 728 A 728 Sbjct: 881 D 881 >UniRef50_B8DMV5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Desulfovibrio vulgaris RepID=B8DMV5_DESVM Length = 663 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 109/541 (20%), Positives = 198/541 (36%), Gaps = 33/541 (6%) Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA------V 269 SW A ++ + I GY + F + + +P W Sbjct: 118 WESWEDADGKVVFVTPACQR---ITGYSLESFRANARF-IEGIMHPEDLPLWRKHREMVA 173 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 S ++ E LA L S + + R + + + QA Sbjct: 174 SGAEMVEVEVRVRTQDGRERWLACTSRRLHDAEGTSQGVRFSGRDVTDRKIMLTQMKHQA 233 Query: 327 LTDPLTLLPNFRALEQAPEQEAGKS---------FCCLRIDNLEFMSRHYGLMMRVHCIR 377 DPLT LPN ++ ++ L +D + ++ G +R Sbjct: 234 WHDPLTGLPNRALCLDRIDRSLHRARRGVDNVCAVAFLDLDRFKVVNDSMGNSAGDQVLR 293 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 + R L + + + +L E +L+L +E V + + + Sbjct: 294 EVARRLAENTRTIDTVSRLGSDEFILLLDEVRSEEEALITVQRICTSLEPPLEVAGRQIR 353 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + +L + H + + + Q + L Sbjct: 354 ISASVGVVM-NRGGGNADEMLRNANIAMHHVKEHGGD-GMAVFQPSMLEQAMNLMQLEID 411 Query: 495 IRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 + ALD + L QPI ++ G++ ++ D GI+ P +F+P+ + Sbjct: 412 LHRALDNNEFFLVYQPIMSLHDRRLTGFEALVRWNHPDRGIVGPSEFIPVSESTGQIHQV 471 Query: 552 DLQVLESLLKWLATHPCDKKGPR---FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VL + LA + R VNL L Q + ++ + + + + + Sbjct: 472 GHWVLAEACRALAAWREQQPSMRSVIMHVNLSARQLSQPGLVEQVAAVLRETGLPARCLK 531 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LE+TE N + + + +L + G R+ IDDFGTGY++ L++ D +K+D FV Sbjct: 532 LEVTETMLMENPDYANLVLRRLKEIGVRLCIDDFGTGYSSLSYLQQFPIDTLKVDQSFVA 591 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + IV+++ LA + L VVAE VE ++Q+ +L +L + QGYL RP P Sbjct: 592 RMCREPGHFKIVQAVVALAHSLGLDVVAEGVEEEEQRIMLSELSCEGGQGYLFSRPVPGE 651 Query: 729 D 729 D Sbjct: 652 D 652 >UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKT0_9GAMM Length = 812 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 102/468 (21%), Positives = 191/468 (40%), Gaps = 23/468 (4%) Query: 283 QGVETEYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + A + FS L++ + + A D LT LPN L Sbjct: 334 SQTGKKLHFSITAAPFVYFSEPATLFVATDISEQKMVQDHISYMANHDTLTGLPNRALLN 393 Query: 342 QAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 EQ + + +D+ + ++ G + ++ + L+ ++ + + Sbjct: 394 DRLEQALAASRRSGDLNALMFIDLDHFKNINDSLGHGVGDLLLKKVAEILINEVRSCDTV 453 Query: 394 YQLPGSELLLVLSG--------PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD 445 +L G E +++L + R+ H + + S+ I L +G F Sbjct: 454 ARLGGDEFVILLQAFQSDVDQVTQDVERVCHKLLTILSQPIEVKQHQLRIGASIGVVLFP 513 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 +TL L+ + + + +S KQ + + + A+++ Sbjct: 514 MADKTLDDLMRFADTAMYHAKENGRN-GFAFYHQAMSLAVEKQQNMESELHQAIEEEQFC 572 Query: 506 LYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 ++ QP+ + E G++ +L + G+M P +F+P + L +L + + Sbjct: 573 VHYQPLVSVGGEIIGFEALLRWQHPEKGLMPPAEFIPSLEVSGLIVPVSNWLLGHCSRQI 632 Query: 564 ATHPCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 SVN+ PL Q ++ + + + LEITE A N Sbjct: 633 VKWKETGFWQPDWYVSVNISPLQFYQADMVPTMQQAISEGGAHLTDICLEITETVAIENI 692 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E ++ ++ + + G IA+DDFGTGY++ LK L DI+KID FV+++ + IV Sbjct: 693 EFAVNRLKVIRELGMMIALDDFGTGYSSLSYLKDLPIDIVKIDRSFVQELGQKSKSQSIV 752 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++T++A+A L VVAE +E+ Q L H +G QG+ I RPQ Sbjct: 753 EAVTNIARAYELKVVAEGIESHDQLMLAHNIGCDIFQGFFIERPQVAE 800 >UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protein n=4 Tax=Legionella pneumophila RepID=Q5ZZI1_LEGPH Length = 985 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 81/463 (17%), Positives = 185/463 (39%), Gaps = 19/463 (4%) Query: 284 GVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--- 337 + ++ I++ + + L ++ + + QA D LT LPN Sbjct: 515 KSGEHFWVSAIISPIRNDNEEITHYLAVMEDVTQKKSYEEMLKHQATFDNLTNLPNRLYA 574 Query: 338 -----RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 RA+ ++ + L +D + ++ G + ++++ L ++++ + Sbjct: 575 VNKLERAISKSHINNQKLAVLFLDLDEFKQINDSLGHAIGDLLLKALSERFLSMIRQTDT 634 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E +++L + + + + S+ + L + + + + Sbjct: 635 IARLGGDEFMMILENIMQDKDAESIAKKCREICSQPFVIESQELLVSTSIGIAIYPEHGK 694 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L+ QS + + + + + A + +L + Q Sbjct: 695 DAKTLMRNADTAMYQSKIRGKN-NWTVFQNTMIEGANNHIRIKTELHQAFTRNELYICYQ 753 Query: 510 PIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 PI + + +L G + PD+ +PL + + +L+ + Sbjct: 754 PIIELKENKVVAAEALLRWQNTTLGQINPDQIIPLAEETGMIIPLGYWILDKVCTQAKEW 813 Query: 567 P-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + +VN+ L L QK+ ++ + KR +S ++I E+TE +++ + Sbjct: 814 EFITGSKIKVAVNISTLQLKQKDFIHKVQLILKRTKLSADSLIFEVTESAFIDDSKFILS 873 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L G ++DDFG GY+ + +K +KID VF++ + TN + ++ SI Sbjct: 874 QLNKLSDMGIHFSLDDFGVGYSFLQYIKSYPFKNLKIDRVFIQGVNTNHNELSLINSIIT 933 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+ LSV+AE +ET +Q L+ + +QG+ +P Sbjct: 934 MARNLKLSVIAEGIETAEQLELMRSMNCDMVQGWYFSKPLSGD 976 Score = 42.3 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 30/127 (23%), Gaps = 7/127 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGK-LR 259 E+R L A + + L Y + + Sbjct: 311 QLKISEERYRNLMNAVADGIFIHNLQGAFLEVNEAACLSLNYSREELINSYVWDIEVGFS 370 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWL 318 LN W +N + T + + LAV + L+ +VR + Sbjct: 371 QESLNQLWENVQKGPINTEGMHRRKDGTTFPVDVRLAVFNATGEKLVLAIVRDITLQKRS 430 Query: 319 NRRWHLQ 325 Sbjct: 431 EATIRKL 437 >UniRef50_B5WDA9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Burkholderia RepID=B5WDA9_9BURK Length = 689 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 98/434 (22%), Positives = 165/434 (38%), Gaps = 15/434 (3%) Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNL 360 RI RR QA D LT LPN L++ + S L +D Sbjct: 232 GRIGSHLRRSLRRLEHQAKYDALTDLPNRVLLDERLSESLVRAAATGQNVSVLFLDLDRF 291 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + ++++ R L L+ + + + G E ++V + + + + Sbjct: 292 KDVNDSLGHRIGDLLLKAVARRLQRLLDATDFVARYGGDEFVIVAERADARELTEMLDRL 351 Query: 421 LN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + S L + F + + L + + E Sbjct: 352 IREMSEPYSIGEHELYLEASIGVSTFPQDGAKPELLTRNADAALYVAKSRGRN-GYQFYE 410 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 +S +++ L +R A +L L QP + G + +L + G ++P Sbjct: 411 PELSRAAAEKLRLTTRLRRAAKANELYLAYQPQVDMKTGRIVGAEALLRWHDEELGEVSP 470 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRII 594 F+PL + L VL R SVN+ PL L + ++ G + Sbjct: 471 AAFIPLAEETGLIQNIGTWVLRQACLQANAWVRAGLPPVRISVNVSPLQLERADLPGVVR 530 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + LE+TE NA+ + +L + G IAIDDFGTGY++ LKR Sbjct: 531 SALRDADWPAELLELEVTEGTLMRNADEAQRAFRELRELGVSIAIDDFGTGYSSLSYLKR 590 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D IKID FV +I +T + +I +A+ S +VAE VE Q+ L + G Sbjct: 591 FSVDRIKIDRAFVCEIGRDTELEALSLAIIAIAETLSFDLVAEGVELDVQREFLVRHGCT 650 Query: 715 YLQGYLIGRPQPLA 728 QG+L Sbjct: 651 VAQGFLFSPAVSPE 664 >UniRef50_C1CZG3 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZG3_DEIDV Length = 805 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 91/485 (18%), Positives = 189/485 (38%), Gaps = 16/485 (3%) Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE 316 +L Y + + + ++ + + + + + + + E Sbjct: 297 RLAYAYSRQHQELQRVLHTQDSERRSRVLSVQMQVEMLKREAERERQRNAELSQANTALE 356 Query: 317 WLNRRWHLQALTDPLTLLPNFRALE-QAPEQ-----EAGKSFCCLRIDNLEFMSRHYGLM 370 + +A D LT L N + +A + +D + ++ G Sbjct: 357 QAQQHLAYRATHDALTGLHNRAHFQAEAERHLADLSGGELGMLFIDLDRFKQVNDTLGHD 416 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH 427 + + + + L +++ + + +L G E L+L G + + + + + Sbjct: 417 VGDELLDQVGQRLRNVVRTGDLVARLGGDEFTLLLPGLRDASDAERVARKVLASLAQPFQ 476 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 L + + + + ++ A+ + + +T Sbjct: 477 VGGHKLHITGSIGVAVAPQDGMDITTMQKHADVAMYRAKHDGKN-AVRTYSAGMGDETAA 535 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L +R AL G+ +L+ Q + GY+ ++ G++ P +F+P+ Sbjct: 536 RMDLERDLREALRNGEFVLHYQGQFDVASGALSGYEALVRWQHPVHGMIAPGRFIPVAED 595 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL + D++G SVN+ P+ + A + + I P Sbjct: 596 SGLIGPLGTWVLREACRQARAWRADERGLTMSVNVSPVQFDTADFARLVQEALEEAGIRP 655 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + ++LE+TE + S+ +++L G RIA+DDFGTG + L+ + D +KID Sbjct: 656 ECLMLELTESTVLRDVASATQQLQRLRALGVRIALDDFGTGQSALSLLRHIPIDQLKIDR 715 Query: 665 VFVKDIVTNTLDAMIV--RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 F+ +T ++ V R + L +A+ L+VVAE VE + QALL ++G QG+ + Sbjct: 716 SFLPG-PDDTDESAQVFLRLLVMLGQARRLNVVAEGVENAEHQALLREMGCPTAQGFYLS 774 Query: 723 RPQPL 727 RP P Sbjct: 775 RPLPA 779 >UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HUB1_LYSSC Length = 581 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 86/458 (18%), Positives = 181/458 (39%), Gaps = 17/458 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-- 345 E+ + + + + + LTD LT + N A + + Sbjct: 109 EWLTIVCVTNDEGKVTNYCGIFTDLSERKIVENELEKRLLTDSLTEVSNRFAYIERMDNL 168 Query: 346 --------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + L +D + ++ G + + + + L L++ + + + Sbjct: 169 LESTSAISHSVQHAVYFLDLDRFKQINDTLGHAVGDSILIEVAKRLKQLLKNKDIIARYG 228 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++ L+ + + S + + N + + + + + L Sbjct: 229 GDEFVITLTNVKNVKEAAKFAEQIISNIEKPMMINGQEVFISTSIGVSVYPVDGRNTEEL 288 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-- 512 + S + + + + + +LL + +R A+D + L+ QP Sbjct: 289 INCADRAMTYSKKNG-LNGYSFYFDELQTDAQRVLLLDSELRRAIDNREFELHFQPKICM 347 Query: 513 -NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 N++ +G + ++ G ++P +F+P + L +LE + + Sbjct: 348 DNEQIQGLEALVRWNNERLGFVSPGEFIPYAEETGLIIPLSEVILEKACEAVIQMQKYGW 407 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 ++N+ + Q N I + +RY++ +E+TE ++A ++ + +L Sbjct: 408 KIPVAINISSIHFKQHNFLDSIQTILERYNMPANNFEIEVTERTVMNSANETVSKLVRLK 467 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + GF+I+IDDFGTGY++ L R D +KID F++ I + +V +I ++ Sbjct: 468 QLGFKISIDDFGTGYSSLSYLVRFPLDCLKIDRSFIQHIGSLDEKQAVVDAIIQMSHRLK 527 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + VVAE VE QQ +L K+ +QGY +P PL D Sbjct: 528 MKVVAEGVEQAQQVDILRKMNCDIIQGYYYSKPLPLND 565 >UniRef50_A5EN18 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=3 Tax=Bradyrhizobium RepID=A5EN18_BRASB Length = 833 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 123/562 (21%), Positives = 222/562 (39%), Gaps = 28/562 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 MI P +A+ R +A + + + + P + L P Sbjct: 228 MIGIPVYAKGTSRTTVADRRRNLTGFIIGVFDLPMLLQAVRTNNPNSSALAINLLPPE-R 286 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-------VETEYSLAFILAVLIS- 300 +I GV R+P W+ +TL + + + F +LAF A + + Sbjct: 287 VINASGVDPQRWPADPNIWS-TTLRIGDADWVFQAAPAGGALMTTHNRALAFYAAGIATT 345 Query: 301 --FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-----EAGKSFC 353 F+V L+ R + NRR A TD LT L N + E+ + Sbjct: 346 LFFAVYLVLSSRNARQLALANRRVLELAQTDALTGLANRAFFLEEMERINDEKGGRFTVF 405 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G + + + L ++E + L +L G E L+ +G + Sbjct: 406 LLDLDRFKNVNDSLGHGAGDELLVQVAQRLRSQLREEDVLARLGGDEFALIQAGFSDQRA 465 Query: 414 -LQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + L + + +++G + + LL + +S + Sbjct: 466 SATELAQRITRLIAEPFQISGQRVEIGTSIGISLAPQHGRDQEHLLKKADLALYRSKSAG 525 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARL 526 ++++S + + L +R A+ Q ++ QP + E G + ++ Sbjct: 526 R-SCYTMYDDVMSAELEARNTLEGDLRDAIAQCQFEVHYQPFYDAETRQRRGVEALVRWR 584 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 G++ PDKF+PL L ++ + P + +VNL P+ Q Sbjct: 585 HPVKGLVPPDKFIPLAEATGLIVPLGEWIIGRACDDATSWPD---DIKVAVNLSPVQFKQ 641 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + I R + P+ + +EITE A + I++L G +A+DDFGTGY Sbjct: 642 AELFDVIQSALARSGLDPKRLEIEITESVLLERAAENESFIDKLKGIGISLALDDFGTGY 701 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L + IKID F+ ++ A ++ S+ LA+ + + AE VET++Q Sbjct: 702 SSLRSLTAFPFNKIKIDKSFIANLSVREESAAVISSVVTLARGLGIQITAEGVETEEQLR 761 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L LGV + QGYL+GRP P+ Sbjct: 762 HLCTLGVNFAQGYLLGRPMPVE 783 >UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Magnetospirillum RepID=Q2W7L5_MAGSA Length = 916 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 112/649 (17%), Positives = 233/649 (35%), Gaps = 29/649 (4%) Query: 109 GTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF-TVV 167 G R+ + + G V + + VG++ DA+ V Sbjct: 254 GRRFVVVVEQPLLSALKLPGGAVVIVTLVLLFGGVGAWVLVRYSRRAILAPIDALAEAVR 313 Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 D+ + + + + ++ + + E++ + A+ ++++ Sbjct: 314 DVEAGDMSRRAPVESSDEIGALAMAFNSMTGRVAGLLNDLGESEEKFRLVMESASDALVV 373 Query: 228 L---LLCTPYENDFIAGYLVP--------VFFIIFTLGVGKLRYPFLNLTWAV-STLCLL 275 + + + V ++ + L + + + Sbjct: 374 IDAEGKIVSWNGAATRMFGYQPAEIMGRNVSLLMPEHLRERHDQILARLRAKIDARIRTD 433 Query: 276 NYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 Q ++ T + + LA + ++R + A D LT L Sbjct: 434 PREQPAMRQDGTLFPVEVTLAGFSFKGNRFYSGIMRDISARKEAESNIRFLARHDALTGL 493 Query: 335 PNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L + ++ + +DN + ++ G + + L + Sbjct: 494 ANRVVLRERLDEILPQTGARQMHCLLFIDLDNFKLVNDVLGHSFGDRLLVEVAGRLRSIE 553 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRF 444 + + + G E +L+ T R + + + + +++G Sbjct: 554 GGHNIVCRHGGDEFILLAPDIRTRERAAELAERVLAVMGDAFAIDAQAIEVGCSIGISVA 613 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + L+ + ++ L + Q ++ L ++R L G++ Sbjct: 614 PDDGTDAETLIRKADIAMYKAKEKGR-LGYQFFTAAMDHQMVERRELEKSLRRGLRDGEI 672 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 ++ QP + G++ + + G++ P +F+PL + L VL L+ Sbjct: 673 FIHLQPKVRLGDGGVTGFEALARWQSAEHGLVPPVRFIPLAEECGLVGAIGDVVLRRTLE 732 Query: 562 WLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 LA + +VNL + L +AG I L + + + P + LE+TE + Sbjct: 733 TLAGWRAAGRKVLPVAVNLSAVQLGNPALAGEIGALLREFDLPPSLLELELTESMLMGDV 792 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + + +L G R++IDDFGTGY++ LKR D++KID FV D+ + + Sbjct: 793 DQVRAILFRLKDQGIRLSIDDFGTGYSSLSYLKRFPVDVLKIDRSFVTDLPGDPEGEALC 852 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I +AKA SL V+AE VET+ Q L + G Y QG+ RP P+ + Sbjct: 853 LAIIHMAKALSLDVIAEGVETEAQSLFLARHGCDYAQGFHFARPVPVDE 901 >UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6G7_9BACL Length = 700 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 127/691 (18%), Positives = 248/691 (35%), Gaps = 49/691 (7%) Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL 125 + + L ++ T ++ + + C + + + + T + QRL Sbjct: 17 GLAAMIGVVQLSAWNGYPPGTDAVVQTLHLLAGLMCLAVSFAIFAQGWILFTDKLSKQRL 76 Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY------ 179 + L + IGI +Y + + + F + + + L A + Sbjct: 77 YTAVLFSMIGILDILY---TVLYGDISLLGFEPSGNLATWFLVISHLLGAFGMLRIFAAT 133 Query: 180 ---------NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 +F + ++ F ++ + E L L LL+ Sbjct: 134 DQQVSGQQKVTMFVSAVLVTLAGLFVLNRYQDRLPTLFETELLQLVLQAGIPLLYLLVAA 193 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 Y + A + + +L + + L + + Q Y Sbjct: 194 AVLYRHR--AERPPAMMTVTRSLLFMAMGHVLLTCPPG--------HVEGLTQAAGQWY- 242 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 I ++ V L + + + A D LT LPN R +++ Sbjct: 243 -MGISYYIVLKGVYRLTIEEPLRGKLLVEAQMKHMAYHDDLTGLPNLRQMKEQLDELLGF 301 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 G + + ID + ++ G + + L L + +Y++ E + Sbjct: 302 TRACIGVAV--INIDRFKAINDSLGYSAGDKVLTELGSRLAVLEGPQQWVYRMGEDEFAV 359 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 V S + L + + ++T + F + +++ L+ Sbjct: 360 VFSELPDAAAAEDRAKQLLASVDPGVLIDDTEYHISLSMGLSVFPNDADSVNELIQFADM 419 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 + + + +T +V L N +R AL++ + L QP + Sbjct: 420 AVHHAKEQG--VEFLRYHAAMKQRTQAKVELENDMRKALEREEFFLEFQPQIRLDTGKMV 477 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFS 576 G + ++ G++ P +F+PL + L VL++ ++ + S Sbjct: 478 GMEALVRWNHPKRGLIPPSEFIPLAEESGLIVPLGEWVLKTACQYNKKWQMDGFEPVCVS 537 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q N+A + + + + PQ + LE+TE + E+++ + +L + G Sbjct: 538 VNLSMRQFRQYNLAEHVNAILREVGLDPQYLELEVTESMT-YDIETALDQLHRLKRLGIH 596 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I+IDDFGTGY++ LK L D +KID FVK+++ + DA IV +IT +A L V A Sbjct: 597 ISIDDFGTGYSSLYYLKSLPIDRLKIDRAFVKEVMYDGNDAAIVSTITTMAHHLKLKVTA 656 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 E VE ++Q L + QGYL +P Sbjct: 657 EGVENEEQLEFLKRQRCHEGQGYLFSKPVSA 687 >UniRef50_A7BRN3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BRN3_9GAMM Length = 581 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 99/497 (19%), Positives = 185/497 (37%), Gaps = 35/497 (7%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWL 318 + + + L F L + ++ +L R L Sbjct: 66 LKMAIASAGQGNFAHCEVKIQKHNGQLTILDFSLTPVKNVHGKTIWILAEGRDLSEHRVL 125 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGL 369 +R L D LT LPN + Q+ + L +D + + G Sbjct: 126 EQRLTDMNLHDQLTGLPNRQLFMDYLDKALMRTKQHQKTTFAVLFLDLDRFKVTNISLGH 185 Query: 370 MMRVHCIRSICRTLLPLMQ--------------ENEKLYQLPGSELLLVLSGPETEGRLQ 415 M + + + L + + L + G E L++L Sbjct: 186 DMGDWLLMEVAQRLQNCLNNFRGKSFCFTKTFASKDILARAGGDEFLILLENISDITEAN 245 Query: 416 HMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + N + ++ + + + +Q+ LL ++ A Sbjct: 246 RLAVTINKVLAKPFLIDRYKIMTSASIGI-VYRTSQQEGMELLRDADAAMYRAKALGK-S 303 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYD 529 + + ++ + + A+ + +L+ QP + + G + ++ + Sbjct: 304 GYAIFSPGMREEAISRLQIEMDLHQAIVNKNFVLFYQPQTELYSNQLVGIESLIRFHHPE 363 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G++ P +FLP++ + +L++ + L T R +VNL P KN Sbjct: 364 NGLILPMEFLPVLEDTGIIIPIGEWILQTACQQLKTWLEAGLLIERVAVNLSPYQFRSKN 423 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + R+ + I+P+++ LEITE + +S++ ++ G R+ IDDFG GYA+ Sbjct: 424 LLKRVADALENSGIAPESLELEITESLLLKDIDSAIKTLKSFKDMGIRVIIDDFGMGYAS 483 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 + +KR AD IKID F+ I+++ DA I + D+A A L+VVAE VET +Q+ L Sbjct: 484 LDYIKRFPADGIKIDNSFINGIISSPEDATITVATIDMAHALGLTVVAEGVETVEQRDFL 543 Query: 709 HKLGVQYLQGYLIGRPQ 725 G QG P Sbjct: 544 RDHGCDLAQGLFYAAPM 560 >UniRef50_A9KPL6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KPL6_CLOPH Length = 547 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 91/429 (21%), Positives = 175/429 (40%), Gaps = 15/429 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAGKSFCCLRIDNLEFMSRH 366 + A +D LT LPN A + Q + IDN + ++ Sbjct: 106 ELKKSKEIVKRMAYSDYLTSLPNRLAFVELLDGIMATIRQNEIVGILDIDIDNFKDINDT 165 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILNS 423 G + + L L++EN+ L ++ G E +++ L+ + + + Sbjct: 166 LGHSYGDEMLIDVMHRLEELIKENDYLSRIGGDEFAILIQNLTDLSELEERILEVQQIFA 225 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + +T Q L+ ++ ++ ++ ++ Sbjct: 226 TPFRVATREFFITVSIGVAIAPKDGKTTQSLVKNMNSAMYEAKERGKN-NFCYYDDSINL 284 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLP 540 + +++ + + +R A+++ ++Y QP N G++ + + GI+ P F+P Sbjct: 285 KMMQKLEMQSELRKAIEENQFVVYYQPQINLVNDRVVGFEALARWQHPEKGIIAPIDFIP 344 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + ++L L + + +VNL K+ + + + Sbjct: 345 LAEDNGMIVAIGKKMLYESCMQLRSLQESGYRDIVIAVNLSARQFKDKDFLPMVYEILEE 404 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + + EITE A + E S+ I +L + G A+DDFGTGY++ LKRL + Sbjct: 405 TKADARGLEFEITETVALDDLEFSISTISKLKEIGITFALDDFGTGYSSLNYLKRLPVNN 464 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F+ I+ N D IV ++ DLAK ++ V+AE VE +Q+ L ++ QGY Sbjct: 465 LKIDKSFLDTILENNSDQKIVHTMIDLAKHLNIEVIAEGVELSEQEKFLKEINCGKAQGY 524 Query: 720 LIGRPQPLA 728 G+P P Sbjct: 525 YYGKPVPKE 533 >UniRef50_Q3A5Q2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5Q2_PELCD Length = 734 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 96/447 (21%), Positives = 177/447 (39%), Gaps = 27/447 (6%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEA-GKSFCCL 355 + +++ ++ A D LT L + + E + L Sbjct: 245 AITGIIQDVTDIYHAEQKIFRLAHFDALTGLAKRKFFMEKLAEAVFLTEHGHGQLAVMIL 304 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-----------ENEKLYQLPGSELLLV 404 +D + ++ + G + +R + + + +Q E+ + + G+E ++ Sbjct: 305 DLDRFKRINENLGHVPGDQILRKMAKRIQRSLQQCHVLYPSSLTEDHCIARFGGNEFAIL 364 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + ++ + L ++ ++N + + F + Q ++ Sbjct: 365 LPEVQDTHQVNRIAGHLLKDIAQPFTFDNCEVLITTSIGICLFPEGSDDQQDIIRNADIA 424 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 Q+ + + T +++L N +R AL + +LY QP + + G Sbjct: 425 LRQAKSQGRD-TFRLYHPSMGKPTQDRLILENDLRNALKNDEFVLYFQPQVDIRSGQLLG 483 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSV 577 + ++ G+ P FLPL + L D VL +A R SV Sbjct: 484 AETLIRWQHPQQGLKLPGAFLPLALESGLIIEIDQWVLRQACAQIARWQAAGYDKLRLSV 543 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ Q+ +A I + ++ I A+ +E+TE N ++ + L + G I Sbjct: 544 NVSGQLFAQEGVAALISDIVRQSGIPTGALEIELTENTLMQNNAQTISTLTDLKQLGTNI 603 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTGY++ LK D +KID F++D+ D I R+I L + L+ + E Sbjct: 604 AIDDFGTGYSSLSYLKNFPIDTLKIDRSFIRDLENAPGDIAITRTIIALGENLGLTTICE 663 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRP 724 +ET QQ+ LL LG QGYL RP Sbjct: 664 GIETHQQKDLLVDLGCYIGQGYLFARP 690 >UniRef50_A6CKI1 Sensory box/GGDEF family protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CKI1_9BACI Length = 778 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 117/664 (17%), Positives = 234/664 (35%), Gaps = 32/664 (4%) Query: 89 MLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFW---LGLVTPIGIKCSMYLVGS 145 + + + + L T FW + + + S Sbjct: 99 LKMNILLFISANILLAGNVLATIRFIRQIRSLERVGFFWILFGSFAIGMAFASIRFTLFS 158 Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 I F IF V L + ++I +L +V F++I + Sbjct: 159 SITLFSTIDLFTNRNIPIFEWVYLNNTLLPLMINIFALVFL--ELVPGLFSEIHSKEQQE 216 Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF-------FIIFTL 253 + ++R TL A+++ L +L + GY + +I Sbjct: 217 LIIENKRRYETLFDNQAVAIFTLDPKGKILKLNNAVQQLTGYPIDQLKKGSSFAELIHES 276 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYH 313 + + S + + + G + + I + + + + Sbjct: 277 KEDEFSSYIMEAVKGSSQMFETKISTSE--GKYIDVQITLIPIFVKEKLANINILAKDIT 334 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-----GKSFCCLRIDNLEFMSRHYG 368 + A D LT LPN + +Q + C L +D + ++ G Sbjct: 335 EVIQTREQIQHLAYHDSLTGLPNRFQFVKELQQRIETSKLPAAVCFLDLDRFKVINDVLG 394 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQ 425 + + ++E+ K+ ++ G E + + L++ + L Sbjct: 395 HQTGDRLLLQLSERFTSFVKEDVKVARMGGDEFTFLFPEIPSMAELENKIEELMALIQTP 454 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 L + + + +T++ L+ +S + + ++ Sbjct: 455 FQIEKQELFVTGSMGISIYPNDSDTVEDLMKYADVAMYRSKEKGKN-TFEFYHQQNDEES 513 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +K++ L IR A+ + + + QP + G + +L G++TP+KF+ L Sbjct: 514 SKKLALEKDIRKAMKEKEFEIVYQPQVKVSTGKIFGVEALLRWNHPAEGLITPNKFISLA 573 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL + + + + SVN+ L +N + R+ Sbjct: 574 EENGLIHELGEWVLRESCRQVNQWHNEGYSDLQLSVNISLKQLYHQNFISTVKRVIDEEG 633 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 S + LEITE A + E + QL G I+IDDFGTGY++ +K D +K Sbjct: 634 FSTSLLDLEITESMAMKDIEYAKLIFNQLRALGISISIDDFGTGYSSLNHIKNFPIDRVK 693 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 IDG F++D+ + A+I+++I + + +L +AE VET++Q L ++ +QGY Sbjct: 694 IDGSFIRDVPGSAEAAIIIKTIIAMTRNLNLLSIAEHVETKEQYEFLQEINCDEIQGYYC 753 Query: 722 GRPQ 725 P Sbjct: 754 SEPL 757 >UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n=2 Tax=Clostridium RepID=A0PXI0_CLONN Length = 591 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 94/469 (20%), Positives = 181/469 (38%), Gaps = 21/469 (4%) Query: 278 NQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + YSL+ + +IS + + + + R + D LT L Sbjct: 109 ELEYRSKSGRMYSLSILGKSIISQRDLQTYYIVIFEDVTKLKESERDINYLKKYDILTQL 168 Query: 335 PNFRALEQ-------APE-QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 P + E L +D+ +F++ G + +R + R L Sbjct: 169 PQKELFVKNLKDEIIRLEGTGKLVGVVTLGLDDFKFINEAMGHLSGDRLLRDVTRRLK-T 227 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 + + L ++ G E ++L+ E +++ +N + + N+ + + Sbjct: 228 LDKKCFLARITGDEFGIILTECEDIKDIENRINHIQQLFCKAFVINDQEVFVTASIGISI 287 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + L+ + + + +S K++ ++ ++ A++ Sbjct: 288 YPLDALNANELIMNATSAQNFVKKNGKND-YKIYSKDISKNAYKRIEMIALLKHAVENNQ 346 Query: 504 LLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 +L+ QP + E G + ++ G++ PDKF+PL + L V+ Sbjct: 347 FVLHYQPQVSLESGSVMGVEALIRWNHPKLGLVYPDKFIPLAEKTGLIIPMGEWVIREAC 406 Query: 561 KWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + + SVNL L ++++ I+ K + P+ + +EITE N Sbjct: 407 RQNKIWHDSGFEELVVSVNLSALQFEKEDLVDVIVDALKTSGLDPKFLEVEITEGILMVN 466 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + ++ + L + G +IAIDDFGTGY++ LK D +KID F+ I + I Sbjct: 467 TDKAIQTLNDLKEIGVKIAIDDFGTGYSSLSYLKEFPIDRLKIDRSFIMGIPK-EDNGAI 525 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I +LAK+ L+VVAE ET L +QGY +P Sbjct: 526 ANIIIELAKSLHLNVVAEGTETLDHIKFLKVRKCDTIQGYYFSKPVSGE 574 >UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Tax=Chromobacterium violaceum RepID=Q7NXP8_CHRVO Length = 712 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 101/462 (21%), Positives = 184/462 (39%), Gaps = 16/462 (3%) Query: 283 QGVETEYSLAFILAVLISFSVCLLYMV-RIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + L+ L S + LL + + + A D LT L N L Sbjct: 232 RPDGSAIPCEVRLSKLPSETGNLLRVSYIDISSRVAAQEKINRLAYFDTLTGLHNQSGLL 291 Query: 342 QAPE-------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + Q+ G + + + + +F++ YG + + + + L + + Sbjct: 292 EQLSALYSLSWQQPGFAVLLIELGDFKFINDVYGNRIGDLLLCHVAQRLQQAIGPHGHAA 351 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E +L+G + + + S + L + + Sbjct: 352 RLGGVEFAALLTGVAGAAEAEAIACRMLDAVSEPFPVDEMMLSVTASIGISLGPEHGADG 411 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ + ++ EE + Q ++V L ++R A+D G+L+L+ QP Sbjct: 412 RELMARADMALYRAKEKSARRV-QVYEEELGQQMRERVELEKSLRHAIDHGELVLHYQPQ 470 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + ++ G++ P +F+P+ Q L VL + L Sbjct: 471 IELSTRRVVGVEALVRWQHPQKGMIPPMRFIPIAEQSGLILPLGRWVLREACRQLKVWQD 530 Query: 569 DKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + R +VNL + + + K +SP+ + LEITE + + S+ + Sbjct: 531 KGRDDLRMAVNLSVAQFTDHELPDFVADVLKETGVSPRHLELEITESCTMLSPQQSIGMM 590 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 E+ G +IDDFGTG++ L R D +KID F+++I + + +I LA Sbjct: 591 ERFRAMGIHSSIDDFGTGHSALAYLTRFPVDTLKIDQSFIRNISNDEKGTALCDTIAYLA 650 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VETQQQ L + V +QGYL+ +P P + Sbjct: 651 HRMGLQVVAEGVETQQQLTFLSSIHVDVVQGYLLCKPLPAVE 692 >UniRef50_A3YH84 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YH84_9GAMM Length = 1052 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 98/453 (21%), Positives = 188/453 (41%), Gaps = 16/453 (3%) Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ-------- 342 +A + + + + + A D LT LPN L Q Sbjct: 573 IATSVLDENGQISHFVASFSDISKLKRSQHKLQHLAHHDALTGLPNRTFLTQKLSGMISN 632 Query: 343 APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 A +Q+ + L +D + ++ G + +R I + + ++ENE + ++ G E + Sbjct: 633 ARKQDKQLAVAFLDLDRFKNINDTLGHLFGDKLLRVIAQRMYNQLKENEVVARIGGDEFI 692 Query: 403 LVLSGPETEGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L+L + L + LN + ++ + + + + + + L Sbjct: 693 LILDPSDGLEALSARLEALNQKIQEMVYIDGKEIMTCASIGVSLYPEDGTSSELLFQHAD 752 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 + + +S Q +++ + + + AL+ ++ L QPI + ++ Sbjct: 753 TALYSAKEAGRAM-HKLYASSLSIQAKERLDIESHLAKALEYKEMSLVYQPIYDFKQQKF 811 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RF 575 + +L G + PDKF+P+ + VLE+ + +A R Sbjct: 812 VKVEALLRWNTPKLGQVPPDKFIPIAEETGGILTIGNWVLETACRTMAQWQQASCQIQRI 871 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ + + ++NI + + PQ + +E+TE + ++ + + QL +FG Sbjct: 872 AVNVSRIQIARQNIFETVKEILILTQCKPQWIEIEVTESAIMNLSKEGLKQLTQLKEFGV 931 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 I+IDDFGTG ++ LK L +KID FV+D+ N D I R I ++K ++ V Sbjct: 932 SISIDDFGTGQSSLSSLKTLPVSTLKIDKSFVQDMPENENDVEIARLILQMSKVLNVRSV 991 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET +Q +L +G QGYL +P Sbjct: 992 AEGVETTEQAQVLKSMGCDLCQGYLFSKPLSEE 1024 >UniRef50_B3E3Z2 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E3Z2_GEOLS Length = 651 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 109/458 (23%), Positives = 195/458 (42%), Gaps = 22/458 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQ- 342 E L LA +SF + +R+ E N R H A D LT LPN L Sbjct: 162 EVKLLEELASDLSFG---IETIRLRTAHEHANARIHRLAFFDTLTGLPNRNHLAGLLADS 218 Query: 343 ---APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 A + + L +D + ++ YG + + + L L+ ++ + + G Sbjct: 219 IAAAKQNNNQLALFLLDLDYIREINETYGHETGDWILVQVAQKLCGLVDDSALVARFGGD 278 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 + +++ T +++++ + + + ++ + + + +T LL Sbjct: 279 DFIIIYEQ-STVHKVRNLAKHILAAIKQPFLFDARSFSISGSIGIAFYPDDADTPTDLLS 337 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---N 513 + + + +S T+++ L+ + AL +G+L LY QP Sbjct: 338 RADLAMSKVKGAGGG--YCLYKRDMSHLLTRKLELVQRLECALAEGNLHLYYQPKVELYA 395 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G + +L G ++P +F+P+ L + VL++ + + + Sbjct: 396 GMMVGAEALLRWQDPVLGWVSPAEFIPVAEGRGLMPQIGEWVLKTACQHIKSWKSKGLNC 455 Query: 574 R--FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R +VN+ R+ R+ + + P + LE+TE + E ++ L Sbjct: 456 RGKIAVNVSAQQFGDPYFLERVARVLEETGVLPSNIELELTESCLMDDPERMSEIMKSLR 515 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 GF IAIDDFGTGY++ LKR D +KID FVK+++ + D I+ +I +AK Sbjct: 516 GMGFSIAIDDFGTGYSSLAYLKRFPIDTLKIDQTFVKNMLDDNNDKAIISTILAIAKQMG 575 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VAE VET++Q+ L KLG QGY RP+P+ D Sbjct: 576 LMTVAEGVETEEQRCALQKLGCVLAQGYYFCRPEPMDD 613 >UniRef50_UPI0001C3140A diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3140A Length = 1090 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 88/496 (17%), Positives = 173/496 (34%), Gaps = 27/496 (5%) Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMV 309 + + E L+ S + Sbjct: 593 TNSTAGRALETGLPQPERVVHFERDD-----DGWELWATVTSHPLLREGESRPYGAVSAF 647 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLE 361 + A D LT LPN L++ + + +D+ + Sbjct: 648 TDVTERRRAQEQIAFLAYHDSLTRLPNRALLDEHLALALARARRAGESVALLYVDLDDFK 707 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQH 416 ++ G ++ I L +++ ++ L + G E L++L+ + + Sbjct: 708 AVNDSLGHAAGDELLKRIAVRLRAVVRSSDLLARQGGDEFLILLTDLDKDPRLSAEAAAK 767 Query: 417 MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 V H + ++G + + L+ + Sbjct: 768 QVETALIEPFHLADAEFEVGASIGISIYPDDAADADTLMRHADAAMYEVKQAGRGGIASY 827 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 + S +T ++ L + +R AL + D +++ QPI ++ ++ + G++ Sbjct: 828 GGD--SRKTLARLSLTSKLRRALQREDFVVHYQPIVAPATGALHAFEALVRWQDAERGVV 885 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 P++F+PL L VL + + VN+ P L + + + Sbjct: 886 GPNEFIPLAEDAGLIEAIGGWVLNEVCRQQRAWHDAGMESHVHVNVSPRQLRRPDFPSTV 945 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + ++P + LEITE A +AE + + LH G R+AIDDFG G+++ RL+ Sbjct: 946 RDALEEQRLTPSMLTLEITESAAMLDAERANPIVRALHDLGVRLAIDDFGAGHSSLARLR 1005 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + +KID F++ + + A ++ +I +L A + VAE V T Q+ L Sbjct: 1006 DVPVQTLKIDQSFLRGVPDDRQAAAMITAIIELGTALGMVTVAEGVTTDAQRRFLVDGDC 1065 Query: 714 QYLQGYLIGRPQPLAD 729 QG+ RP D Sbjct: 1066 PLAQGFHFARPLTADD 1081 >UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V32_COLP3 Length = 682 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 89/465 (19%), Positives = 177/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + H A D LT LPN Sbjct: 195 RKNGEVYPEWLNISSIRNKESQISNYICQFTDITNRKKSEEELHFHAYHDSLTSLPNRHL 254 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + EQ + +D + ++ G + ++S+ +++N+ Sbjct: 255 LFEKLNHLCVLHQEQPTYFAVLFCDLDRFKMINDSLGHDVGDELLKSVANRFEAKLRDND 314 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E ++V+ G + L + + S +F + Sbjct: 315 IIARTGGDEFIVVIEGEKALKNLDKICLQILSLFEVPFQTKYGEFKTTISIGVSQFPSDS 374 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 E ++ L+ + + +++ L + I A+++ ++ Sbjct: 375 EDVRELISFADVAMYKIKKSGGNH-YSFFDVKEKALIQQRLELESEITQAIEKDQFAVWY 433 Query: 509 QPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + G + ++ + G++ PD F+P+ VL++ + L Sbjct: 434 QPQVNTQTHEVYGVECLIRWNHPEQGLIPPDLFIPIAEANGSIKELGYFVLKTACQQLRQ 493 Query: 566 HP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + ++N+ + ++ ++ + + +++ LE+TE + Sbjct: 494 WRIKNIFTGVMAINVSLRQFERNDLLAQVKKTLVDEMLPAESIELEVTESLFSEDNNYHT 553 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L + G ++AIDDFGTGY++ +RLK L D +KID FV +I D IV + Sbjct: 554 PILCALRELGVKVAIDDFGTGYSSLQRLKSLPIDNVKIDKCFVDNIEHCPEDVAIVMATI 613 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+K + V+AE +ETQ+Q L LG QGYL RP D Sbjct: 614 LLSKTFKVDVIAEGIETQEQADKLSDLGCFNQQGYLYSRPLKAHD 658 >UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=8 Tax=Chroococcales RepID=B7K4E5_CYAP8 Length = 840 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 105/565 (18%), Positives = 214/565 (37%), Gaps = 27/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 I F ++ A + R A +LL+ T Y + Y + + Sbjct: 265 IRLYLFDITKYKTREAKLTTGKDRYRLFVEQATEGILLVNCETQYIIEANQAYCHLLGYT 324 Query: 250 IFTLGVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLA---FILAVLISFSVC 304 + +G + + + A+ L + + ++ I+ + Sbjct: 325 TAEI-IGLSLHQLIAIDKAIIDQELSCVTSETPYFIKESIHRHKDGSLISVSGKINRTTY 383 Query: 305 -----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKS 351 ++R + + QAL DPLT LPN AL+ A + + Sbjct: 384 QGQEIFCLVIRDIRDRKQAEEQLQYQALHDPLTNLPNRESFNQKLVLALDHAQRYQHLMA 443 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + ID+ ++ G + + S + L ++ + + + E +L+L + Sbjct: 444 VMFVDIDSFTNINNTLGPSIGDRLLDSFGKRLSSCVRTGDTVARWGSDEFVLLLPQIKNT 503 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + ++ L + + + E + LL ++ Sbjct: 504 EDTVKLAQRIFDNLQVPFILDDHRLPVKCSIGIAVYPQDGEAGETLLKNAGTALGRTKEQ 563 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILAR 525 +S + + L + + L++ L+ QP N + G + +L Sbjct: 564 GRNH-YQFYNPNLSSEAALLLRLESLLHQGLEKKQFFLHYQPQINLKTKKVVGMEALLRW 622 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 GI+ P KF+PL + +L VL++ + + D VNL + Sbjct: 623 EHPSLGIINPQKFIPLAEKTDLILHLGKWVLQTACEQNISWQKDGLPPISIGVNLSAREV 682 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q N+A + R+ + PQ + LE+TE + + ++ L G RIA+DDFGT Sbjct: 683 QQPNLAEVVARVLNDTGLDPQWLELELTEMSLRQHLTQARKSLRDLKNLGVRIALDDFGT 742 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 G+++ L++ +K+ F++D+ + + I+ + ++K ++ +VAE VET++Q Sbjct: 743 GFSSLGYLQQFSFRTLKLHQAFIRDLRGTSEELGIISAALAISKGFNMRIVAEGVETEEQ 802 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 +L L + +QGY RP P+ + Sbjct: 803 LKILSNLNCEEIQGYCFSRPLPVKE 827 >UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 Tax=Yersinia RepID=A7FEI0_YERP3 Length = 855 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 100/564 (17%), Positives = 202/564 (35%), Gaps = 29/564 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 +I R A E+R ++ A+ L +L+ + Sbjct: 285 VIRRAISGAKATDRSRAALAASEERFRHVAESASD-WLWETDAELQVTYLSPRFLIISGW 343 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ--------NFLQGVETEYSLAFILAVLI- 299 + L ++ T + + ++ +I Sbjct: 344 SVDHWLGRHLDSLLNCDITSLRTWLQHTHLTDSRNELQCTYFSAKGSKRVCRIHAKPIIQ 403 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 V R +R +L D LT LPN + + E E Sbjct: 404 QGEIVGFRGTASDLTREIEAEKRIEHLSLHDALTGLPNRTLMTEFLENKLHNLAAVEHPL 463 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + +D + ++ ++G + + + L +++ + + + G E +L++S + Sbjct: 464 VILNVNLDKFKPVNDNFGHVTGDQVLYQVAERLRSCLRDKDLVSRQGGDEFILIISDLSS 523 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++ + + +R N + +G + + LL ++ Sbjct: 524 SYEIELLCARVITRIQMPYVINEQEIYLGASIGITLAPQDSMQAEELLRFADIAMCEAKN 583 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 ++ + +++ L +R A+ + + LY QP + + G + ++ Sbjct: 584 SARNR-WRFYASEMNDRLMQRIELEKFLRLAVKKSEFCLYYQPRYRTDDMQLIGAEALVR 642 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G++ PD+F+ L + L L + T P SVN+ + Sbjct: 643 WNHPVLGLLMPDQFIALAEETGLITAISDWTLLQACQDAMTWP---TSLIVSVNISAIEF 699 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + R+ + + + LEITE +A+ ++ + L G R++IDDFGT Sbjct: 700 RGQCLIERVRQALLVTGLPSHRLELEITERIMIEDADGALKIMTALKTLGIRLSIDDFGT 759 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L R D +KID F+ + + IV I +L A S++V+AE VET +Q Sbjct: 760 GYSSLNYLHRFPFDGLKIDKSFIDKLTESHEGQSIVEGIINLGHAISMTVIAEGVETAEQ 819 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L L +QGY + +P P+ Sbjct: 820 LTYLQSLHCDEVQGYFLAKPMPVE 843 >UniRef50_Q72EZ6 Sensory box/GGDEF domain/EAL domain protein n=3 Tax=Desulfovibrio vulgaris RepID=Q72EZ6_DESVH Length = 1072 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 92/462 (19%), Positives = 179/462 (38%), Gaps = 19/462 (4%) Query: 285 VETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 Y ++ + + + + + + Q + D LT LPN L Sbjct: 586 NGENYPEWLSISAIRDESGATTNYVALFHDISDLKAKEAQIRYQGMHDALTGLPNRALLL 645 Query: 342 QAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + + IDN + ++ G I + L L++ + L Sbjct: 646 ERLAGELKEGQGTGRLCGLLYIDIDNFKTINDSLGHEAGDKFIAEVAEHLTLLIRPEDTL 705 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E +++++ P E + + + S+ I + L +G + + Sbjct: 706 SRLGGDEYVILVANPGEEREVVLVAERILHHFSQPIALLDRELHVGLSIGIAIHPADGKG 765 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 LL ++ A + + + ++ L +R AL G+++ + QP Sbjct: 766 PDELLTNADLAMYRAKAQGKN-TYERFSPHLHDRIRSRMELEGRLRHALRHGEIVPHFQP 824 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + + DG ++P +F+P+ L +L S L + Sbjct: 825 RVDLATGRIVGAEALARWTLPDGTRISPGEFIPVAEDLGLIFDLGEHMLRSSLAFTRALM 884 Query: 568 CDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 + +VNL + ++ GR++ + + P+ + LEITE S+ ++ Sbjct: 885 DEGLPDITMAVNLSLVQCRHADLVGRVLAALRDTGVPPERLELEITESAIMSDVTRTLRR 944 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 +++L G +A+DDFGTGY++ LK + +KID FV+D+ I ++ + Sbjct: 945 LDRLAALGITLAVDDFGTGYSSLYHLKHMPLHTLKIDQSFVRDLPHVAGSRTIALTMLAM 1004 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A+ L V+AE VET Q L G + +QG+L P Sbjct: 1005 ARNLDLDVIAEGVETGAQMHFLRDHGCRVVQGFLFSPAVPGD 1046 >UniRef50_A4ADN6 Sensory box EAL/GGDEF family protein (Fragment) n=1 Tax=Congregibacter litoralis KT71 RepID=A4ADN6_9GAMM Length = 399 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 92/387 (23%), Positives = 171/387 (44%), Gaps = 9/387 (2%) Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D+ + ++ G + +R++ R L +++ + + +L G E +VL G Sbjct: 2 LAVLFLDLDHFKDINDSLGHSLGDEVLRAVSRRLSDCVRKADIIARLGGDEFTIVLQGVG 61 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + I L +G + T + LL ++ Sbjct: 62 SSVIAVEVAQKILLAFEQPIIIGERALTVGTSIGISVSPDDGLTTEELLRNADAAMYRAK 121 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEIL 523 + + ++ + ++ L + +R AL++ + + QP + G + +L Sbjct: 122 RNGRNTFMH-YTPDMTERALARLSLESDMRRALEREEFHVAYQPQVDMHSGALIGVEALL 180 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK-WLATHPCDKKGPRFSVNLMPL 582 + G ++P F+P+ + VL+ + + G RF+VN+ Sbjct: 181 RWDHPEKGAISPKHFIPIAEENGQILALGKWVLQKVCAEQIRLADAGLAGIRFAVNVSGR 240 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 LL + I + K +A+ LEITE S E + ++ + K G I++DDF Sbjct: 241 QLLHEGFLEFIEGMIKTGTCRGEALELEITESVLLSEPELAAEAMQAIRKLGIAISVDDF 300 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+ + +KID FV+DIV + D I ++I L A +L V+AE VET+ Sbjct: 301 GTGYSSLAYLKQYPLNRLKIDASFVRDIVIDPDDRAIAQTIIALGNALNLEVIAEGVETE 360 Query: 703 QQQALLHKLGVQYLQGYLIGRPQ-PLA 728 +Q+A+L G QG+L RP P A Sbjct: 361 EQRAILVNDGCSLGQGFLFSRPLAPAA 387 >UniRef50_C5T9I2 Diguanylate cyclase/phosphodiesterase (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9I2_ACIDE Length = 632 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 105/530 (19%), Positives = 201/530 (37%), Gaps = 23/530 (4%) Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 A VL + +F + + ++ + A + L Sbjct: 98 AGIYDADGVLFAHYVREPDPNFPTTLRLAGMEHVAERAGMRVLEMARPVEVAGTVWGTLY 157 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS---EWLNRRWHLQALTDPLTL 333 ++ + V T ++ F+ A+LI+ +V L + R H A TD +T Sbjct: 158 IRKS-MAAVYTRLTVRFVSALLIALAVMALATAMVLRSRAAVRNAENRLHALAHTDAVTG 216 Query: 334 LPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 N A + + + + +DN + ++ +G +R + L Sbjct: 217 TGNRHAFNERLAAEILRASNLGSRLALIYIDLDNFKTLNDTFGHAAGDGLLRQVAVRLRS 276 Query: 386 LMQENEKLYQLPGSELLLVL----SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAW 441 ++ + + +L G E ++L + Q +V+I S + + A Sbjct: 277 AVRAGDSISRLGGDEFAVILRLDMNDETLTRYGQRIVDIFQSTYTEV-GQQVSVTCSAGI 335 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + L+ ++ + + ++ ++ + + +R L+ Sbjct: 336 ATFPDDASDRDSLVSNADTAMYRAKEMGKNRCVRF-DASMNQALARRQTVEHALRWELEH 394 Query: 502 G-DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 G L L+ Q + ++ G + +L + G ++P + + + L VL Sbjct: 395 GSGLALHYQALYRATDRALVGAEALLRWTHPELGSISPLEVVSVAEDCGLIIPLGYWVLR 454 Query: 558 SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + + A R +VN+ L R++ + + ++ + +E+TE Sbjct: 455 TACRDAAQWQAQGP-LRVAVNISARQLGDPQFLERVMDILREEGLAAHQLEIELTETVLM 513 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 N E+ + + +L + G +AIDDFGTGY++ L++L +KID FVKD+ Sbjct: 514 ENMEAGAHTLHRLSQLGIHLAIDDFGTGYSSLAYLRQLPMSRLKIDRSFVKDLPAQEHSR 573 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 IV +I LA L V AE VET QQ L + G LQGY+ RP P Sbjct: 574 TIVTAIVALAHGLGLQVTAEGVETPQQAQYLVQQGCDVLQGYVFARPLPA 623 >UniRef50_A6SXB0 Signal transduction protein n=2 Tax=Oxalobacteraceae RepID=A6SXB0_JANMA Length = 898 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 87/477 (18%), Positives = 182/477 (38%), Gaps = 20/477 (4%) Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + + ++ ++ ++ + L +R + R A D Sbjct: 410 AMDTGFFEDDYQVPADSPVDAEWLKRKFVRSENGLAITLRDISEPKRHEREMSRLATEDG 469 Query: 331 LTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN ALE A + + +D+ + ++ G + ++ + Sbjct: 470 LTALPNRHWFMSYLPKALENARANATMLAILFIDLDDFKNVNDTLGHSAGDQLLCTVAKR 529 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWN----NTGLDM 435 L +++ ++K+ ++ G E ++L +E H+ + +N + + + Sbjct: 530 LRSVLRPSDKVIRIGGDEFTVILEAIHSEEEAAHIAHAINQALREPFEISRDTTSQKNRI 589 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G F + + ++ L+ + + + ++ + Sbjct: 590 GGSIGISIFPRDGQDVETLVKNADIAMY-AAKTGSKGQFRFYDHTLYEDIKMRLNTEQEL 648 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 + A+ + L+Y QP + G + ++ G++ P+ F+ L + L Sbjct: 649 QQAIKEDQFLIYYQPRVQTQTGKLLGIEALIRWQHPTRGLVLPNDFIGLAEESGLINPIG 708 Query: 553 LQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V++ + LA+ + SVN+ P + + I ++ I + +E+ Sbjct: 709 ELVVDKVCAQLASWLKQGVEAVPVSVNVSPHQFNEGKVKKSIAASLAKHGIPASLLEIEL 768 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N + ++ G ++ +DDFGTGY++ L+RL DI+KID F + Sbjct: 769 TESAMMRNIGDIFDELTAINAMGIKVHVDDFGTGYSSLSLLQRLDMDILKIDQAFTSQLG 828 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +I +AKA + VVAE VET +Q +L L +QGY + P P Sbjct: 829 RGKDGEIFFTAIVSMAKALGMRVVAEGVETLEQLHILQTLSCDEVQGYYVAWPLPAD 885 >UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GYS2_SHEPA Length = 1072 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 83/459 (18%), Positives = 189/459 (41%), Gaps = 19/459 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ- 346 EY + + ++ + + ++ + + D LT LPN +Q Sbjct: 593 EYLKITAVKNSKNKTIQHIGLFLDISNNKQYEQDIWYKTNFDSLTKLPNRHLFSSRLQQA 652 Query: 347 -------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + + +D +F++ +G ++ L ++ ++ + ++ G Sbjct: 653 IDSAHNTNSQVAIFFIDLDRFKFINELHGHAAGNKVLKQSATRLEAVLGPDDSIARIGGD 712 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +++ G + + L ++ ++N + + + + ++ LL Sbjct: 713 EFVVISPQTGNVG-AEQLAQKLSDTLAKPYLFDNKETIISSSFGIAFYPEDGQDIEMLLH 771 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 Q+ ++ + +++ L +R A+ Q + L QP+ + Sbjct: 772 NSETAMYQAKRDGRAH-YQYFSPEMNVEMLERMHLEQRLRKAVKQSEFYLEYQPVIDMHS 830 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 E + ++ D G+++P F+P+ + L +L+ L LA Sbjct: 831 GEVTSVEALVRWQDPDYGVISPQAFIPIAEEAGLIEPLGEWILQQALSDLAQWHAQGLML 890 Query: 574 RFSVNLMPLT-LLQKN--IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + ++N+ + ++ + + ++ I+ + + +EITE + + +E + Sbjct: 891 KMAINVSARQCIHSRDISFFDILKQTLAKHDIAAENLHIEITESMLIEDKPQCLQTLESI 950 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G I +DDFGTGY+ L + +IKID F+ + + N DA ++++I +A++ Sbjct: 951 KQLGVDIYLDDFGTGYSALSYLTQCPISVIKIDKSFIDNALDNPSDAKLIKAIVMMAQSL 1010 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +VAE VET +Q L LG Y QGYL+ +P A+ Sbjct: 1011 EMPLVAEGVETVEQWHFLRNLGCDYAQGYLMSKPLAKAE 1049 >UniRef50_B9ZM87 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM87_9GAMM Length = 685 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 95/467 (20%), Positives = 182/467 (38%), Gaps = 47/467 (10%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLR 356 + + R+ R+ R H A DPLT LPN R E E+ + + Sbjct: 206 VQLGRVVERNRHAERLIHH-ASHDPLTGLPNRRLFHDRLEHAIARYAREPESLFAVLFVD 264 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL---------------YQLPGSEL 401 +D + ++ G + + + LL +++N+ + +L G E Sbjct: 265 LDRFKLVNDSLGHTAGDELLAQVGKRLLTALRQNDTVSRPGGNQNTRPDDTLARLGGDEF 324 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD-----------GN 447 ++L G + L + + + + + Sbjct: 325 TILLEGLHEPVDALRVAERLQAILHQPFSIAGQTVYVTVSIGIATRPYGQACPVVSPDQD 384 Query: 448 QET-LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 T + L+ + ++ + + + + Q + + L ++R ++++ ++ Sbjct: 385 GPTCAEDLMREADMAMYRAKSLGKARC-EFCDPGMQSQALESLRLETSLRESVERNAFVV 443 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 + QPI + G++ ++ + +G ++ PD+F+P+ L D+QVL + L Sbjct: 444 HYQPIMSLADNRITGFEALVRWER-EGELLPPDRFIPIAEDAGLVHLIDMQVLYTACSQL 502 Query: 564 ATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 S NL L + + + + P+ + LEITE N + Sbjct: 503 QAWNAQRSGPPLTISTNLSARQLTRPELVDEVATILCGTDTPPEQLRLEITETATLGNLD 562 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + ++ L G +A+DDFGTGY++ L RL DI+KID FV + + +V+ Sbjct: 563 ELIATLKGLKALGVSLAMDDFGTGYSSLSYLHRLPLDILKIDRAFVAGLDRDEYSQRLVQ 622 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ ++A+ L VAE VE+ A L LG QGY RP P Sbjct: 623 TVINMARNLGLEAVAEGVESNTHAATLRALGCTRAQGYYYSRPVPAD 669 >UniRef50_C4WM42 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WM42_9RHIZ Length = 803 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 113/727 (15%), Positives = 240/727 (33%), Gaps = 29/727 (3%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMF 72 ++ V + + F++ LA + I + + + + W + +L G Sbjct: 67 WLAISAFAGGVGVWATHFVAMLAYSGTVAIEFDFTATVLSAATAVLGFWLSLH-LLKGAA 125 Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 +S + + + A A + + L + G S + FW Sbjct: 126 LKYALMAAISATLSIAAMHFTGMSAIKAAADIHYDLPPIFVGGAISVLILLAAFWFVTNA 185 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIF--TVVDLLSLFTAVLIYNMLFYYLTRMI 190 + + VG T + + T+ L L + + + Sbjct: 186 SGWSRILLPTVGGILAVCTLHFTAVASTELVPNPTLPAADPLGIGRLWLVVAIAAVVCSV 245 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + + R + G + ++ + E + + Sbjct: 246 ALATISAVFIDRYMTDLKGFANATLDGLAVIRDGGIVEMNARFSELMRRSEKSLMGIEPD 305 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 L + + E + LA +L + R Sbjct: 306 TLLLA-------ADGLPVCARRAEAIEAAPRFPNDERIFELAVHAIEYQGRPCEVLAV-R 357 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKSFCCLRIDNLEFMS 364 R+ A D LT LPN E+ + L +D + ++ Sbjct: 358 DLTEKRAAQRQIEHMARHDALTDLPNRMFFEERLANAVARPSREPFAVLALDLDRFKAVN 417 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR 424 +G ++++ L + + ++ G E +++ G + + + Sbjct: 418 DIFGHAEGDRVLKTVSSILKRCVNGIDTAARIGGDEFIILQVGVPQPRGARKLSEKILEA 477 Query: 425 QIHWNNTGL----DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + +G + + + + + ++ L Sbjct: 478 -FRLELNTVLDPTAVGVSIGVALYPNDGKDAEAIRHAADIALYRAKTEGRGL-FAFYSPE 535 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + + ++ L +R A+ +G + + QP+ + GY+ ++ + G + PD Sbjct: 536 MDQEIRERRQLEADLRHAMVRGQIGIAYQPLFATSDGRCTGYEALVRWNHPERGQIPPDV 595 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+P+ + VL + A +VNL P+ ++ + + Sbjct: 596 FIPIAEETGTIVALGEWVLREACRTAAEWES---HLSIAVNLSPVQFRLVSLPDTVRSVI 652 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + P + LE+TE + +++ + ++ K G RI +DDFGTGY++ L+ Sbjct: 653 AETGLDPTRLELEVTESALMKDRLTTLELLRRMKKSGVRIVMDDFGTGYSSLSNLQSFPF 712 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D IKID F+ + T+ IVR+I L ++ L VVAE +ET Q ++ + G + +Q Sbjct: 713 DKIKIDRSFITSMETDVSARAIVRAIVGLGRSLDLPVVAEGIETFDQHRMVIEEGCEQVQ 772 Query: 718 GYLIGRP 724 G+L GRP Sbjct: 773 GFLFGRP 779 >UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Burkholderiales RepID=D0J3T4_COMTE Length = 728 Score = 558 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 130/713 (18%), Positives = 250/713 (35%), Gaps = 66/713 (9%) Query: 41 YIFLAWMPLCVMLSILFIFG-----WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTF 95 +F +++ L + + G W + ++ G + + + + LG Sbjct: 30 AVFASFVTLGLARRMRMASGRIGRIWWAIGAMVMGTGVWAMHFIGMQAFELPITLGYSGA 89 Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 + L + + + Y W L+ GI YL + + I+ Sbjct: 90 LTLASWVAAVAASALAFGVATRAEYRWPHFLGASLLMGGGICAMHYLGMLAIEMSIPIAW 149 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 + +V +L + L + + Sbjct: 150 DWP-------LVAASALIAVLASATALTLF-------------------RALFSLSGKRL 183 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 L A V+ +C + A + + + + V L Sbjct: 184 WLFQTLAALVMGFAICGMHYTGMSAASFASGSVCLSAEALSGPELTTIIIITTVMLLIAA 243 Query: 276 NYNQNFLQGVETE-YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 ++ +++ + L L + + + N +A DPLT L Sbjct: 244 MFSTLLDARLQSTAFKLNQSLQEANA-------------KLQLANTELRQRAFADPLTNL 290 Query: 335 PNFRALEQAP-------------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 PN E + + +D + ++ +G + S Sbjct: 291 PNRLLFEDRLIHALLRLERANRSRTKERLGILFVDLDGFKPINDSFGHAAGDQILVSAAE 350 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYG 438 L+ + ++ + ++ G E L++L + + N + S+ N L + Sbjct: 351 RLMAEARSSDTVARVGGDEFLVLLEDTQDVAACMAVANRILKALSQPFRLGNKELQITCS 410 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F + L+ + + E + ++Q+ L N +R A Sbjct: 411 IGIVAFPDHG-DRDHLIANADAAMYAAKRNGGN-GFAVFEPHMGSDASEQLELQNDLRHA 468 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + +G + L+ QP + G + +L + G++ PD F+PL +F + V Sbjct: 469 IQRGQMELHYQPKIDSERGNIIGVEALLRWAHPERGMIAPDIFIPLAERFGIINSLGNWV 528 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 +E + LA R ++NL L + +A RI + R+ + ++ EITE Sbjct: 529 IEEACRQLALWRDMGLQMRVAINLSVHQLRESGLADRITQTLLRHDVQASQLLCEITESV 588 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 A + +++ IE+L G ++IDDFGTGY++ L++L A +KID F++D+ T Sbjct: 589 AMEDTQATQRAIEELRDIGIFLSIDDFGTGYSSLNYLRQLPAQQLKIDRSFIRDLETEED 648 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +V ++ LA A L VVAE VET Q+ +L + LQGY RP P Sbjct: 649 ARAVVHAVVRLAHALGLRVVAEGVETAGQRDILIDMQCDELQGYFYARPMPAD 701 >UniRef50_D2LTE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LTE4_BACS4 Length = 716 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 101/447 (22%), Positives = 172/447 (38%), Gaps = 18/447 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKS 351 + + ++ + + A D LT LPN R LE A Q+ S Sbjct: 261 NEVIEVIATINDITELKNSELAVKNMAYHDALTGLPNRRILEEDLMYRLVDAKTQQKKAS 320 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK----LYQLPGSELL-LVLS 406 + +D ++++ G + I L L +N LY L G E +++ Sbjct: 321 LIIVDLDKFKYINDTLGHNVGDRFIMMAAERLQTLTFDNHVEYFRLYHLGGDEFAWIIIG 380 Query: 407 GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E + + L ++ N F + + L+ + Sbjct: 381 PDEHVCIVTRQILTLFDEPFYYRNGEFHQKASIGVSVFPEHATNPEELMKAADMALLSAK 440 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL-DQGDLLLYAQPIRN---KEGEGYDEI 522 + +VL+ + +R A+ L+ QP+ + ++ + + Sbjct: 441 HAGGN-TFRKFNSQMKNVFVSKVLMEDDLRQAIIANNQFELFYQPVMDVKQQKINSCEAL 499 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 + G++ P F+P+ + L V+ + L + SVN+ Sbjct: 500 IRWYHPKKGLINPADFIPIAEETGLIIPLGEWVIRQACRDLKRWEESQIHLNISVNISAY 559 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L Q + R+ + + P + LEITE N S+ +++L + GF IAIDDF Sbjct: 560 QLKQSDFVERLTTIVSDERVLPNRIQLEITENGLMENTTDSINTLQKLKQIGFTIAIDDF 619 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 G GY++ LK+ + +KID FVKDI ++ D+ IV S+ L K L VVAE VE Q Sbjct: 620 GIGYSSLSYLKQFPVNCLKIDRSFVKDIPSDNSDSAIVSSVVKLGKDLGLLVVAEGVEGQ 679 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L + YLQGY +P D Sbjct: 680 EASDYLSSIECPYLQGYYYSKPIKFED 706 >UniRef50_B8G486 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Chloroflexus RepID=B8G486_CHLAD Length = 699 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 121/617 (19%), Positives = 223/617 (36%), Gaps = 36/617 (5%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR----RD 203 D PL + G D V L + ++ I+ + + Sbjct: 71 DLPLPVVLMTGYGDEQVAVAALKAGALDYIVKTPDSLRDLPRIIERALRERRLLVERRQA 130 Query: 204 IAPSLGKEKRAFTLSWLAALSVLL-------------LLLCTPYENDFIAGYLVPVFFII 250 E+ + ++ ++ + Y D + + F +I Sbjct: 131 EQALRQSERLFRAMIERSSDAISIVDRAGRVRYASPSTRHLIGYAVDGMLAVPINGFAVI 190 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 ++R F L + ++ +G + ++ R Sbjct: 191 HPTDRERVRQLFNKLIQHSGSSVTADFRVRHAKGGWRWIEATASNWLDDPAVQGVIVNYR 250 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQ-EAGKSFCCLRIDNLE 361 + + R L D LT LPN +A++++ + L +D+ + Sbjct: 251 DITERKLMELRLQHGMLHDSLTGLPNRLLLNDRLLQAIKRSHRNLHYQFALLFLDLDHFK 310 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 F++ +G + + +I L ++ + +L G E +++L + +V + Sbjct: 311 FINDSFGHPLGDRLLVAIASRLSSCLRTVDTCARLGGDEFVILLDDIASPTDAIRIVERI 370 Query: 422 N---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 S + N +L Q+ E Sbjct: 371 LRQVSLPFEIDGRLFHTSVSIGIVFGANNYTDPSQMLRDADIAMYQAKMAGKGR-YRIFE 429 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + ++ L + +R A+ + +Y QPI + G++ ++ GI+ P Sbjct: 430 PAMREAAQIRLDLEHELRRAVANHEFCVYYQPIIHLPSGRLVGFEALVRWRHPTRGILLP 489 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIAGR 592 FL + + L+ QVLE + + L SVNL ++Q N+ R Sbjct: 490 AAFLHVAEEAGLNDSIGWQVLEQVCQQLVVWRRLNPRAAALSVSVNLSARQVMQPNLYDR 549 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 +++L +Y + P A+ LE+TE + + +L + G +IAIDDFG GY++ L Sbjct: 550 LMQLLAQYQVPPTALKLELTESTFMEYSHDVAALLNRLREQGIQIAIDDFGVGYSSLSYL 609 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 +L D IKID F+ + + IV +I +LA +L VVAE VETQ Q + +G Sbjct: 610 VQLPIDQIKIDRNFIVQLESKQHSQAIVNTIVNLAHNLNLEVVAEGVETQGQLDWIRAVG 669 Query: 713 VQYLQGYLIGRPQPLAD 729 QY QGYLIG P + Sbjct: 670 CQYGQGYLIGLPLTADE 686 >UniRef50_B0U8J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Rhizobiales RepID=B0U8J8_METS4 Length = 905 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 102/455 (22%), Positives = 185/455 (40%), Gaps = 19/455 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----- 342 +++ + A + + + + A D LT LPN L + Sbjct: 447 GRAISVVQAAIP--AGGFVCTHEDVTERRRSEEQIAYLARHDALTGLPNRIPLREWMEEV 504 Query: 343 --APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + CL +D + ++ G +R + R L ++ +++ +L G E Sbjct: 505 FARRPYGDVGAVLCLDLDGFKVVNDSLGHPAGDELLRLVARRLRGVVSATDRVARLGGDE 564 Query: 401 LLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +V G E + + + + + +G T LL Sbjct: 565 FAIVQVGAEQPRQAALLAERVVAVLQQPFEIQGQQVVIGASLGVATALSADPTPDALLRS 624 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE 517 Q+ A + + + ++ L +R ALD+G ++ QP+ Sbjct: 625 ADIALYQAKAAGRG-TWRFFDAEMDLEIQRRRRLAADLRRALDEGQFEVHYQPLVEARSR 683 Query: 518 ---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 G++ +L + G ++P F+PL + L VL A+ P + Sbjct: 684 ALRGFEALLRWRHPEHGSVSPAVFIPLAEETGLIRPLGAWVLAQACAEAASWPE---PLK 740 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VNL P+ +Q ++ + R+ + P + LEITE + E ++ + +L G Sbjct: 741 IAVNLSPVQFVQGDLVAEVRRVLAETGLGPGRLELEITESVLLQDNEVTLAVLHELRTLG 800 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 I++DDFGTGY++ L+ D IKID FV+++ T IVR++ L +A + V Sbjct: 801 ALISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRNLARETDSVEIVRAVIGLGRALGMGV 860 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET +Q +L + G LQGYL RP+P+ + Sbjct: 861 LAEGVETTEQLDILRQEGCDELQGYLFSRPRPVTE 895 >UniRef50_Q12T53 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Shewanella RepID=Q12T53_SHEDO Length = 941 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 94/445 (21%), Positives = 172/445 (38%), Gaps = 26/445 (5%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 + + R+ + + D LT L N + Q + L + Sbjct: 479 GIAHDITERKQHQRKLYRLSHFDKLTNLANRYLFTLSLGQAITSAKALNQTFALLFLDLT 538 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET--EGRLQH 416 + ++ + G ++ L + + L + G + ++L + + Sbjct: 539 RFKIINDNLGHSAGDKLLQQAALRLTEQLNSQDILARFGGDKFCILLPESDEKQAEAVAL 598 Query: 417 MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + ++ +G F N + LL Q + Sbjct: 599 TLIKILAQPFEVYEQSFILGCRIGISLFPTNGHDPETLLKQADAALYVAKK--RPAGFAF 656 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQ----GDLLL--YAQ-----PIRNKEGEGYDEILAR 525 E + +++ L +R AL + L Q P + G++ ++ Sbjct: 657 CSEEQAVYNQRRLKLEQGLRLALSKSSFDESFELSAVYQSLNQLP--DAGLAGFEALIRW 714 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 + + G ++P +F+P+ + L +L + + L R SVNL L L Sbjct: 715 VHPELGPISPMEFIPIAEETGLIFELSRWMLTKVCRQLKEWHQLGFDFKRVSVNLSALDL 774 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + N+A II L + P+ + +EITE + E S+ ++QL G +AIDDFGT Sbjct: 775 ININLAEEIINLIEEAGAEPRWLKIEITETALMAAPEQSISTLQQLVGNGIHVAIDDFGT 834 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK L A +KID F+++I+T+ D +V+++ +A + V AE VETQ+Q Sbjct: 835 GYSSLAYLKSLPATSLKIDQSFIRNIMTSIEDQAVVKAVISMAHSLGKKVTAEGVETQEQ 894 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L QGYL +P D Sbjct: 895 LDFLITRHCDLAQGYLFAKPLIAQD 919 >UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UAD7_METS4 Length = 1034 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 104/513 (20%), Positives = 193/513 (37%), Gaps = 20/513 (3%) Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L L G + V F R + + F + Sbjct: 508 LAELLGTAPETLAPGESMEVIFAEIGARCSLGRRALARMRALQRDIATREGAGTFKISGQ 567 Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 +L+ + + + + R A DPLT LPN + + Sbjct: 568 DGRTLSITQRPMADGGS--VAIYEDVTEQQQAEDRIRFLAQHDPLTRLPNRVLFRERLDA 625 Query: 347 EAGK------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + L +D + ++ G + + ++ L + E + +L G E Sbjct: 626 MMRADAPDATALLYLDLDAFKNVNDTLGHPVGDALLAAVGARLGACVGEGGVVARLGGDE 685 Query: 401 LLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 + + E E Q + + ++ + +G LL Sbjct: 686 FAV--ACAEGEAAAQALATRIIAQLSAPYALAGRTVQVGASVGIAVSGPEARDADTLLRH 743 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 ++ LA E+ ++ + +++ L + + A+ G L+L QP+ + Sbjct: 744 ADMALYEAKGRGRGLA-CVFEKSIAARLHERLALQSDLAEAVPGGQLVLAYQPVFDLAGG 802 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 G++ ++ G ++P +F+P+ Q VL+ + A P G R Sbjct: 803 RVSGFEALVRWNHPVRGFVSPAQFIPIAEQTGQIEAIGAFVLDRACRDAAALP---PGIR 859 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VNL P+ L ++I RI ++P + LEITE ++E + +E++ G Sbjct: 860 VAVNLSPVQLRAEDIVERIATALAESGLAPARLELEITETALMEDSERMVQLLERIRALG 919 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 RI +DDFGTGY++ L+ IKID FV+++ T IV +I LA ++ Sbjct: 920 VRIVLDDFGTGYSSLSYLRTFPFHKIKIDQSFVREMTTRANSLAIVSAIVGLADELGMAT 979 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 AE +ET + K+G + QGY +G+P+P+ Sbjct: 980 TAEGIETADHLDFVRKVGCREAQGYFLGKPKPI 1012 >UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4J8_OXAFO Length = 1077 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 83/446 (18%), Positives = 165/446 (36%), Gaps = 16/446 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 + + + + QA D LT LPN R L +Q Sbjct: 620 DGSVRYYVELSNDFTEKKEAEDMIWRQANFDFLTGLPNRRMLLDRLQQEIVKVNQSGKKL 679 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +DN + ++ G M + + L ++E + + +L G E ++L+ Sbjct: 680 ALLFLDLDNFKDVNDTLGHDMGDLLLVDVAGRLNECVREIDTVSRLGGDEFAVILTELSD 739 Query: 411 EGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + ++ + + + + ++ L + Sbjct: 740 LRIAETVTQCMLRSLAQPYRLDGEIAYLSASIGMTVYPDDGTGIETLQKNADQALYAAKQ 799 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + + ++ L N +R A+++ + QPI + + ++ Sbjct: 800 AGRNR-MSYFTASMQAAAQNRIRLANDMRIAVEEHQFEMLYQPIVELGTGKIHKAEALIR 858 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT 583 GI++P +F+ + + L + + + G + S N+ P Sbjct: 859 WHHPLRGIVSPAEFISIAEETGLILTISDWAFREVAREVGRWRERYYPGFQISFNISPAL 918 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 K R ++++EITE + + + + H+ G IA+DDFG Sbjct: 919 FQSKTDYSDWFDELARLKAPGSSIVMEITEGVLLVSNWQVIAQLTEFHRHGMEIALDDFG 978 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+ + D +KID FVK+I D + ++ +A + V+AE V+ ++ Sbjct: 979 TGYSSLSYLKKFEIDYLKIDQAFVKNIENEPKDMALCEAMIVMAHKLDMKVIAEGVQNER 1038 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ LL G Y QGYL P A+ Sbjct: 1039 QRWLLAGAGCDYGQGYLFSEPLAAAE 1064 >UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMB6_LYSSC Length = 782 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 100/530 (18%), Positives = 205/530 (38%), Gaps = 35/530 (6%) Query: 214 AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 ++ + L + + F+ + + + I+ ++ V + P L A + Sbjct: 258 WRIIAEIDQLKIAQSVKPIFNVTLFVLLFAICLTSILISVIVRSITKPLQVLVDASVKVS 317 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + + + + + E+ L ++ A DPLT Sbjct: 318 EGDLSGHVIIKSQDEFQK------LGDAYNHMI-------------DSLSKFAFYDPLTN 358 Query: 334 LPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN R A+ QA +++ S + +DN + ++ G ++ + L Sbjct: 359 LPNRRQFVFTLEQAITQASSEQSKFSIIFIDVDNFKQVNDTLGHSAGDELLQKVAEQLQS 418 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWG 442 + + +L G E +++L L+ M++ L + + + Sbjct: 419 SIGSEGVVARLGGDEFVILLEHRADHAYLEKMLSSLRDSFVQPFTIHGQITFVQMSLGIA 478 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + T + LL ++ + ++ K+ + IR AL + Sbjct: 479 SYPIDGVTQEELLKHADIAMYKAKESGGN-NHRFFDNKMNELVIKKNQIEQMIRLALARN 537 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 ++ ++ QP + G++ ++ + G ++P+ F+P+ + + D V+ Sbjct: 538 EINVHYQPQIEPATGKLRGFEALVRWKSPELGFVSPEDFIPIAEKTGFITQIDEWVMYQA 597 Query: 560 LKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 SVN+ L L + + ++ + + P+ + +EITE Sbjct: 598 CLKNVELQHQFGYPFLMSVNISALQLERTDFVDKVQLILNETKLKPEYLEIEITESILVE 657 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + ESS+ + +L G +IA DDFGTGY++ L L +KID ++++ + T + Sbjct: 658 SFESSICILRKLENLGVKIAQDDFGTGYSSLNYLSLLPIHTLKIDRSLIQNMTSATAEKT 717 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I+ SI LA VVAE VET++Q LL + ++QGY RP Sbjct: 718 IIESIIQLAHKLGHDVVAEGVETKEQYILLKEWNCDFVQGYYFSRPVSED 767 >UniRef50_C5CLH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CLH4_VARPS Length = 989 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 96/461 (20%), Positives = 178/461 (38%), Gaps = 22/461 (4%) Query: 289 YSLAFILAVLISFSVC-LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 + ++ V+ + + ++R S+ R A D LT LPN R L Sbjct: 518 FEISVSRKVIGEGAAARFIVILRDITESKLAAREIEHLAFYDILTGLPNRRLLLHRLQAT 577 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + L +D + ++ G ++ + L ++E + +L G Sbjct: 578 IDANVRRSRHGALLFLDLDAFKTLNDALGNATGDELLKQVAVRLQDSLKEGGTVARLGGD 637 Query: 400 ELLLVLSGPETEG-----RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L + + + + + F Q++L Sbjct: 638 EFVVLLDNLSEDAGVAAMQANAAGEAILAALNGTFQLADHQYHSTGSIGAVVFSATQQSL 697 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL Q + + AL E + T + L + + AL +L+ Q Sbjct: 698 EDLLKQADIAMYYAKSAGGN-ALRFFEASMQTAITARATLESELHAALAGEQFVLHYQSQ 756 Query: 512 R--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--P 567 N + ++ G++ P F+ L + L + VLE+ L Sbjct: 757 VASNGHVVAAEVLIRWQHPVRGMVQPGGFIELAEETGLIVPIGMWVLETACVQLERWSHD 816 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 ++ R +VN+ + R+ + +R P + LE+TE ++ + Sbjct: 817 ARRRHLRLAVNVSARQFRTDDFVDRVRDVLRRTGADPTRLELELTESLLQDKVSETICKM 876 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + L G R ++DDFGTG+++ + +L + IK+D FV+ I + +I+++I +A Sbjct: 877 QALAALGVRFSMDDFGTGFSSLSYMTQLPLNQIKVDKFFVQSIGLDPKVELIIQAIIGMA 936 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L +VAE VETQQQ L G QGYL RP PL Sbjct: 937 RNLDLEIVAEGVETQQQFEFLQAHGAMLCQGYLFSRPVPLD 977 >UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QR24_9BACI Length = 842 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 128/714 (17%), Positives = 260/714 (36%), Gaps = 45/714 (6%) Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR--Y 114 F R + S + + + S +V++ + I+R++ Sbjct: 119 FWVAARLTQACMLFFIIFFPDRQVQSRQKKTMFIFSVLYVLVISYIIIRYEQKLPILVVD 178 Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFT--------- 165 G + + L ++ ++ + + I + Sbjct: 179 GKGTTNLKNFLEYIIILFYASTAYMLLCSYKKQPKKAHLDLILAFVFLILSEFLFTLYKN 238 Query: 166 VVDLLSLFTAVLIYNMLFYYLTRM-IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 V DL + + Y++ + I + ++ +EK T++ Sbjct: 239 VYDLQNFLGHLYKGISYIYFMKGIYIATIKEPYDAQKKAEEELKKREKYLKTITSSLGEG 298 Query: 225 VLLL-----LLCTPYENDFIAGY-----LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 V++L + E + + GY L F G + Sbjct: 299 VIVLDKDKKITFINQEAERLLGYQKNELLGKALFQKIHCGSEHQCDSLRECPLCQTAELK 358 Query: 275 LNYNQN---FLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALT 328 Y F++ T +A++ +I + ++ + R + + + QA Sbjct: 359 KAYRVEEDFFVRKDGTLLPIAYVSTPMIDDNGEVIGSVIVFRDITERKKYDEKIKYQAYH 418 Query: 329 DPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN R L + A E + + L +DN + ++ +G +M ++++ Sbjct: 419 DALTDLPNRRYLIEKLKNELKKAEEHNSRIAILYLDLDNFKNINDSFGHVMGDLLLKNVA 478 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPE--TEGRLQHMVNILNSRQIHWNNTGLDMGYG 438 + L ++ + + +L G E ++LSG + E + LN + I N + + Sbjct: 479 QRLT-MIHPDCFIARLGGDEFAVLLSGNDFNIEEIACKTIQSLN-QPIKLENKEVFITTS 536 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + + L+ + + Q ++ + +RTA Sbjct: 537 VGISVYPKDGDDEMTLIRHADMAMYDAKKKGKNQ-FSFYTAELEQQKIRKSKIEQLLRTA 595 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ ++ L QPI + K+ G + + + G + ++F+ + + + Sbjct: 596 IERKEVSLCYQPIIDTVSKQIIGLEALARWNHPEIGDIPANEFIAVAEENGQIVSLGKHI 655 Query: 556 LESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L++ L+ L SVNL L I +L ++ + + +EITE Sbjct: 656 LKTALQHLKQLHEIGFDYLYVSVNLSLRQLRHHEFTALISQLLQKNKLQASHLEIEITEH 715 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 A S+ + ++NI++L G RIAIDDFG G ++ L+ D +KID F+ D+ TN Sbjct: 716 IALSDEKCVIHNIQELKDIGVRIAIDDFGVGCSSIGYLRTFSVDTLKIDKSFIFDVATNP 775 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A + ++ A +L VVAE VE+ +Q L + +QGYL P Sbjct: 776 NTAQLTSALITFAHNLNLQVVAEGVESAEQLCFLEQHHCNKIQGYLFSPPVSFE 829 >UniRef50_Q9HYT3 Uncharacterized signaling protein PA3311 n=9 Tax=Pseudomonas RepID=Y3311_PSEAE Length = 783 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 125/693 (18%), Positives = 230/693 (33%), Gaps = 71/693 (10%) Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 L + F+V C + R L+ +WQ + + + F Sbjct: 85 LVALAFLVACLAGYTALDMVERVGNSLSHPRLWQWI--------GAFCLGSGIWATHFVA 136 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR------- 202 L DL ++LI Y M P F + Sbjct: 137 MLAFHAPIA------LRYDLPITGLSLLIAVAASYLTMYMTARPRFGLLPCLLAACCIGL 190 Query: 203 -DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 A +++ L L + + Sbjct: 191 GIAAMHYTGMAAMRSVATQYYQPSLFALSVLIAIGAAFTALAAVPYLRGRRSARYRYMKL 250 Query: 262 FLNLTWAVSTLCLLNYN-QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIY-------- 312 +L A + + + V L + L ++ Sbjct: 251 IASLLLAGAIAAMHFTGMAALVLSVPAGTPLELQASADSLRLGWLTGVLASAIAACGIWA 310 Query: 313 ------HRSEWLN---------------RRWHLQALTDPLTLLPNFRALEQ--------- 342 A D LT L N A + Sbjct: 311 AWSEKQRERRLSENSRVNALLNQLDHAHASLRQMARYDSLTGLQNRTAFNEVFVQHLENC 370 Query: 343 APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 G + L +D+ + ++ G ++ + + ++++++ + + G E Sbjct: 371 RLR-GKGLAVMFLDLDHFKRINDSLGHDSGDQLLKIVSERIRSVLRDSDVVARFAGDEFC 429 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + L+ + + L I + L M + + E + LL Sbjct: 430 V-LADLTQDHEAHILSQRLMQKMKEPIALDGRTLVMTASVGVSLYPNDGEQCEELLKNAG 488 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 QS A A + + T+++ + +R AL L L+ QPI + E Sbjct: 489 LALHQSKACGRNNA-QFFSRQLLVRATQELQMEEELRQALRDDQLELHYQPILALADGEV 547 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRF 575 + ++ G++ PD+F+ L + + D VL + L + H + R Sbjct: 548 HQLEALVRWRHPTQGLLGPDRFIGLAEANGMIDQLDDWVLRRACRDLRSLHLAGHERLRV 607 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN L + ++ + ++ ++ + LE+TE+ N + ++ +E+L + G Sbjct: 608 AVNCCASNLGRASLVDEVRHALEQAGLAACFLELEVTEDALMYNIDQTIPLLERLRELGV 667 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++IDDFGTGY++ L+RL D +K+D F+ DI + D I ++I +A+ L VV Sbjct: 668 SLSIDDFGTGYSSLAYLRRLPLDALKVDRSFIMDIPASQRDMEIAQAIIAMAQKLHLKVV 727 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET QQ A L + + +QGYL RP PLA Sbjct: 728 AEGVETPQQLAFLRENHCELVQGYLFSRPLPLA 760 >UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VE11_DESVV Length = 997 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 101/558 (18%), Positives = 204/558 (36%), Gaps = 34/558 (6%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPVFFIIF 251 R E+R + A + +LL P + + + Sbjct: 416 AERRSVEQALRRAEQRYRGIFENAVEGIFQIAPDGMLLRGNPAMAEMFGYSDIESLREVG 475 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI------LAVLISFSVCL 305 ++ + + N + + E ++ +A ++ Sbjct: 476 SMAEAMFAEATSSDVFFHQLEMTGNVSGFEFRARHREDRELWLRVNARRVADAHDATLFY 535 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---------FCCLR 356 + S ++ QA DPLT LPN + ++ L Sbjct: 536 EGFLTDITISHRSRQQLAHQAYHDPLTGLPNRLLFLDHLQLAMQRAARRADAMFTVLYLD 595 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + +R + TL +++ + + + G E ++L Sbjct: 596 LDRFKIINDSLGHGIGDALLREVACTLRRCVRDVDTVARFGGDEFAILLEDTGNCAGAVR 655 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + ++ ++ + + T + +L ++ Sbjct: 656 IARRIRESLAQPVNIAGHEVFTTASIGIVLQTRDYLTPEDILRDADTAMYRAKEMGKSR- 714 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDG 530 + T + + L +R A+++G+L L PI + E G++ +L Sbjct: 715 FKVFNARMREDTLRLMALETDLRFAVERGELSLRYHPIVDLEDGSLHGFESLLRWR---R 771 Query: 531 GI--MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 G ++P +F+P+ L A V+E + + +A VN+ L++ Sbjct: 772 GNEDVSPAEFIPVAEDAGLIADIGAFVIEDVCRQVAAWQDTACDCGIVHVNISGRQLMRP 831 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 A + + +R+ I+ + E+TE + ++ + QL + G R+ +DDFGTGY+ Sbjct: 832 GFAQMVDEILRRHGIAGSCLRFEVTESVLVRHGTLAVSVMHQLRELGIRLCLDDFGTGYS 891 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+RL + +KID FV + + +VR I L L VVAE VET++Q L Sbjct: 892 SLGYLRRLPVESLKIDRSFVWGMEKDEAGRALVRGILTLGLHLGLEVVAEGVETEEQAVL 951 Query: 708 LHKLGVQYLQGYLIGRPQ 725 L +G +Y QG+L +P Sbjct: 952 LRDMGCRYGQGFLYAKPL 969 >UniRef50_Q1QZB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZB7_CHRSD Length = 831 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 134/756 (17%), Positives = 264/756 (34%), Gaps = 45/756 (5%) Query: 11 IKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFI--FGWRGVVPV 67 + ++++ FT + L + L + S + + + + + V V Sbjct: 66 LGVWSMHFTGMLALRLPLPMHYDAGLTLLSLVPAMLGSGYALRIMAMPRPRLSYSLVGGV 125 Query: 68 LCGMFC---TNLWNFHLSFL-QTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 + GM L + + +G ++ A + + RY R Sbjct: 126 VLGMGIGIMHYLGMEAIRMPVEVRYDIGLFVMSLVVAIGLGAAAMLIHRRYARQRRLNRL 185 Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 + I S+ + G + A V S + ++ Sbjct: 186 D----HRLVSIAACISLAISGMHYTAMSATYYLPTPTPAPQHAVTPASWLGVSVSGIVIL 241 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDF 238 L + F +R S+ ++ + + LL ++ + Sbjct: 242 --LLMVAGLWVFIDRRLQRHQRQSVMSREQLMEVIAAINDAFLLFDHRGRIVLSNRTFST 299 Query: 239 IAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + GY + + + ++ V + + + + Sbjct: 300 LTGYTPDEIRNQPLSILEHSHESARTYRDIQRCVVEHGHWQGEIEARRKNGEAFPVRVSV 359 Query: 296 AVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + + + + H A D LT LPN + L Sbjct: 360 NRVDYSQGNVHHFVATLHDLSAHREAQAKIHRLAHHDTLTGLPNRQTLYARLDALQAACR 419 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 Q G + L IDN + ++ G + + + R L + L +L G+E L+ Sbjct: 420 AQGPGGALIMLDIDNFKALNDSRGNAVGDTLLLHVARRLKRFARHEHDLARLGGNEFALI 479 Query: 405 LSGP-----ETEGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 ++ + + L ++ + ++ + RF + L+ Sbjct: 480 VTDLPSAHDDADEALSRHLDTVRQAIGGVYDLDDFTHTTTHSLGGVRFGDGDVSADELVK 539 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--K 514 + S + + + + +V + +R AL L L+ QP + Sbjct: 540 RASLAMSHAKQEGGNAS-RAFRPEMEQALQVRVCMEAELRQALATDQLQLFYQPQVDTRG 598 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKG 572 G + ++ + G+++P F+PL + L + VL++ + LAT Sbjct: 599 TIIGAEALIRWQHPERGMISPGDFIPLAEETGLIEQIGGWVLDTACQQLATWSRHDATSH 658 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 + S+N+ Q + R++ R+ + + LE+TE +N E + + +L + Sbjct: 659 LQLSINVSVRQFQQADFVSRVLDTIARHRAPAERLTLELTESLLLANVEGVIDKMTRLKQ 718 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++DDFGTGY++ LKRL + +KID FV+D++ + DA IV++I LA + L Sbjct: 719 HGLNFSLDDFGTGYSSLAYLKRLPFNTLKIDVSFVRDVLVDANDAAIVKTIVALADSLQL 778 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VAE VE Q Q+ L +LG Y QGY GRP P+ Sbjct: 779 KSVAEGVEMQAQREFLERLGCHYHQGYYFGRPSPID 814 >UniRef50_C7QU84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=C7QU84_CYAP0 Length = 726 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 114/557 (20%), Positives = 209/557 (37%), Gaps = 33/557 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN-----------DFIAGYLVPVFF 248 R+ EKR L A+ +L++ + D + F Sbjct: 151 RRQAEIALRASEKRFRALIENASDIILIVAPDSQLTYASPSVERVLGYDASSLTGQRFFD 210 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS--FSVCLL 306 +I G++ F + S L L + +T L I L + Sbjct: 211 LIHPDEQGEII-GFFDKIKETSNLSQLLPDFRVRTQKDTWVILEAIAKNLQEDPAVGGFV 269 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRI 357 + A D LT L N AL + +E + L + Sbjct: 270 VNCHDITERHQTAEQLRYDASHDKLTGLANRSALLKQLKRAIEQKKRRKEDHFALLFLDL 329 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G +M ++ + + L +E + L + G E + L + + + Sbjct: 330 DRFKVINDGLGHLMGDQLLKEMAKRLQRCHREGDLLARFGGDEFVFFLKEIRQQEQAIVV 389 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 ++ N+ + + + ++ + +L + A Sbjct: 390 AERIHQALREPFILNHQEVFISASIGITLSADHYDSPEQMLRDADTAMYWAKARGQG-GH 448 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGG 531 + KQ+ L + +R A+ + +L++Y QPI + + G + ++ + Sbjct: 449 TIFAPTMHLSALKQLHLESDLRQAIQRQELVVYYQPIFSLDTQKIVGAEALVRWQPPEKP 508 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR---FSVNLMPLTLLQKN 588 ++ P+ F+PL + L D VL+S + L + K SVNL P Q N Sbjct: 509 LIPPNDFIPLAEETGLILEIDHWVLKSACQQLYQWQQEFKTLAPQFISVNLSPKQFSQPN 568 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + +I + K ++ Q + +EITE N+ S + + QL + +I +DDFGTGY++ Sbjct: 569 LTEKIAQTIKETGLAEQCLKIEITETVFLENSTSVLEILCQLQQLNIQICLDDFGTGYSS 628 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L + + +K+D FV + + IVR + LA L ++AE +E +Q LL Sbjct: 629 LSYLHQFPLNSLKLDRTFVSRLGKTNKNDTIVRIVATLANELDLELIAEGIEEIEQIQLL 688 Query: 709 HKLGVQYLQGYLIGRPQ 725 H LG Q+ QGY P Sbjct: 689 HYLGYQWGQGYCFSPPV 705 >UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KBF3_PSEF5 Length = 641 Score = 556 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 90/432 (20%), Positives = 171/432 (39%), Gaps = 17/432 (3%) Query: 314 RSEWLNR-RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 + D LT LP+ L E + L +D + ++ Sbjct: 192 ERRVAELLKVSHLLHYDVLTGLPSSTLLGDRLGQAMARARRYEQRLAVMFLGLDRFKRIN 251 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 G ++ I R L M+E++ L++ E ++VL + +++ + L Sbjct: 252 HALGYPAGDELLKRIARRLEQGMRESDSLFRYGSDEFVVVLHDQQHPAQIRALAQKLLAT 311 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 S+ L + + + + L+ + S + + + Sbjct: 312 VSQFDDIAGHDLQVTASLGISLYPEDGQDALALIKKAEMAMRTSKEQ-APGSYCFFTDDM 370 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 + + +Q L + I AL++ + L+ QP + G + ++ + G ++P+ F Sbjct: 371 THRAREQQYLESGILQALERREFHLHYQPKIHLASGNVVGAEALIRWQRPQQGWISPELF 430 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ L R VL + S+NL Q + ++ Sbjct: 431 IPVAEDSGLITRISQWVLGEATRQCRAWQNAGLPPVPLSINLSAADFRQPQLLQQLRDAL 490 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + P + LEITE N E ++ + + G R+A+DDFGTGY++ L++ Sbjct: 491 SDNALDPAWLELEITEGVLLQNVEVTLATLLAIKALGVRLAVDDFGTGYSSLSYLRKFPV 550 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D++KID F+ + DA++V +I +L ++ +L V+AE VET QQ L + G + Q Sbjct: 551 DVLKIDQSFIHGLSHEHKDAVLVSAIINLGRSLNLKVIAEGVETHQQLTFLQQQGCEEAQ 610 Query: 718 GYLIGRPQPLAD 729 GY + P D Sbjct: 611 GYYFSKALPAED 622 >UniRef50_C9YEY1 Uncharacterized signaling protein CC_0091 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YEY1_9BURK Length = 559 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 103/520 (19%), Positives = 185/520 (35%), Gaps = 15/520 (2%) Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 +++L + + G + L L+Y L W + Sbjct: 34 VALLAYPIILVVAGLLLGGRHFIYYLAAMLLFSAFLQYATSVLLWRSDVMNSTKLELLRD 93 Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF----- 337 V S + + + L + + D LT LPN Sbjct: 94 VWVVLLASAFAVWITVSDWRKLLGELHIRIDEYRQSQAHLTYLSQHDALTELPNRSLGRQ 153 Query: 338 ---RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 A+ +A + + + +DN +F++ G ++ I L ++E + + Sbjct: 154 LMEAAIVRAQTSGSHVALMFVDLDNFKFINDSVGHAAGDEFLQQIASRLRSAVRETDVVM 213 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E L+ L N + + L + + Sbjct: 214 RQSGDEFLVGLLDVPDIQAASKAANEVLEHLGGVYRVQGSELSSSCSIGLAVYPRDGHDF 273 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL Q+ + M+ + L+ ++TAL +G+ +L+ QP+ Sbjct: 274 DTLLRHADLAMYQAKQAGRN-TFRFFDVMMQDDLSANPRLVAELQTALVRGEFVLHYQPV 332 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + ++ G++ P +F+P + L VLE + Sbjct: 333 VDMQDHRLLGAEALIRWQHPVRGLLGPVEFIPAAERSGLIVDIGHWVLEEACRQAVKWQR 392 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + +VN+ P+ L + ++ + + + LEITE +A + I Sbjct: 393 PGQPLVVAVNISPVQLHRGDLESAVRMALANSDLPGACLELEITESVLMGDATTLADTIR 452 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L G IA+DDFGTGY+N L+R AD IKID FV+ ++ IV +I + K Sbjct: 453 HLKALGVSIAVDDFGTGYSNLGYLQRFAADKIKIDQSFVRAMLAEPEQQAIVTAIIQMGK 512 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L AE VE+ +ALL ++G + QGY RP Sbjct: 513 SLKLLPHAEGVESDDARALLLEMGCRTGQGYWFARPLAAD 552 >UniRef50_A4VMP6 Sensory box protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VMP6_PSEU5 Length = 855 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 108/571 (18%), Positives = 202/571 (35%), Gaps = 38/571 (6%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + R++ + + E+R ++ A+ + +E D A Sbjct: 285 HALRVMHLLDVSYARLASSRSALAESEERFRDVAEAASDWI--------WETDEQARLTF 336 Query: 245 PVFFIIFTLG---VGKLRYPFLNLTWAVSTLCL----------LNYNQNFLQGVETEYSL 291 G L P L L S L + G E L Sbjct: 337 LSNRFRQITGHEPAQWLGRPLLELLITDSAALQNWLEAPHSAPLRSSYRAADGCERYCRL 396 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ-------AP 344 A + R + D LT LPN L + Sbjct: 397 AARTIQHDGKLLGYRGTASDVTEETRAQARVQYLSQHDALTGLPNRSRLRDYLEQNLASL 456 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + + +D + ++ G + + L ++ + + +L G E ++V Sbjct: 457 RSGSTLTLLYIDLDRFKPVNDTLGHAAGDEVLIGVASRLRERTRDGDLVARLGGDEFVVV 516 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + + + N + S + + + +G + LL Sbjct: 517 LHRMGEDNDIDRLCNRIIDALSAPFIYEDQQISIGASIGVALAPTDANQANELLRCADIA 576 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEG 518 Q+ + + + +++ +R A+ + L ++ QP + G Sbjct: 577 LYQAKDAGRG-TWRAYGREMDQRLHERLRREEELRVAITEQQLEVHYQPRYQSQGLYIIG 635 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 + ++ G++ P++F+PL + L VL + A P D SVN Sbjct: 636 AEALVRWDHPQRGMLLPEQFIPLAEETGLIIPLGRWVLRQACQQAARWPGDT---VVSVN 692 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L PL L + I + ++ + LE+TE ++++ ++++ G R+A Sbjct: 693 LSPLQLHDDRLLEEITQALADNGLAGNRLELEVTESALLRETQNTLELLKRIKALGVRLA 752 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L+ D+IKID FV I + D IVR++ +L + + V AE Sbjct: 753 VDDFGTGYSSLTTLRHYPFDVIKIDNSFVAGIGQSIEDHSIVRALIELGRGLRMRVTAEG 812 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET++Q LL G +QG+ + P P D Sbjct: 813 VETEEQLRLLTDDGCTEVQGFHMSHPLPAQD 843 >UniRef50_Q7NSJ7 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NSJ7_CHRVO Length = 662 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 101/440 (22%), Positives = 171/440 (38%), Gaps = 18/440 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCL 355 LL + R A D LT LPN L+QA + + Sbjct: 221 ALLVSEVDITDLKHAEARASFLANHDVLTGLPNRNGIRSELLPHLQQALRNGRQVALMFI 280 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + L+ L+ +EK +L G E L++LS P+ R + Sbjct: 281 DLDRFKNVNDSLGHACGDELLIRMAGRLVGLLGHDEKAARLGGDEFLVMLSAPQVAERAE 340 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + + + +G + L+ ++ + Sbjct: 341 ALARRILQALSVPMRLEGMDVGVSASIGISVCEGRELDLEQMMRHADLAMYAAKDAGRNN 400 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + + ++ Q+ L N IR LD G+ + Y QP + G + + Sbjct: 401 LM-FFTPALEARSQAQLALENDIRRGLDCGEFIAYFQPRVDIASGRVVGAEALARWRHPQ 459 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G++ PD F+P+ + Q+L + SVNL + + Sbjct: 460 RGLLMPDSFIPMCEDCGMVMELGRQILLQAARQQRQWRDRGLDLLVSVNLSACQFVDPGL 519 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 G++ ++ P + LEITE + E +M ++ + G RIA+DDFGTGY+N Sbjct: 520 PGQVEQILADSGCQPDRLELEITESVLLGHDEQTMSTLQAMRALGVRIAVDDFGTGYSNL 579 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+R +KID F+ D+ I IT L + L++VAE VET+ Q A L Sbjct: 580 AYLQRYPLTSLKIDRSFIADLDDKP---AIAELITTLCRMMGLNMVAEGVETEAQLAWLA 636 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G Q QGYL + Sbjct: 637 ERGCQEYQGYLCSPALSAQE 656 >UniRef50_C6WUZ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUZ4_METML Length = 834 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 87/438 (19%), Positives = 175/438 (39%), Gaps = 16/438 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRI 357 L + R+ A D LT LPN Q A + + L + Sbjct: 387 LTIATDITEVAEYRRKIESMAFHDQLTGLPNRTLFSQQLSVAIDQAKTNNSQFALIILDL 446 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + + + R + + ++ +L G E ++++ + ++++ Sbjct: 447 DQFKSINDTMGHAIGDKLLIEVARRITNSLDQHCTCARLGGDEFIILVESVPSREHVEYV 506 Query: 418 VNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 N+L ++ + + + F + E + LL + Sbjct: 507 SNVLLNQIMQVYVIDGSEYFISASIGIAYFPDDSEDMDDLLKYADSAMYHAKKGGRNR-Y 565 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + ++ ++ + +R A++ ++ L QPI + + +G + + G Sbjct: 566 HTYSPAITESIQHRLNVETELRRAIENDEIYLEYQPIVDMTSNQVKGLESLCRWHSRKLG 625 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIA 590 I++P F+ + + + ++ K K P SVNL + ++ Sbjct: 626 IVSPMVFIQIAEETGMIVELGQWIMREAFKAARLLNAQLKHPVSVSVNLSARQFFEVDLI 685 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ L K +P + EITE + +S + + + G ++++DDFGTG + Sbjct: 686 HQVRHLLKEQQCNPAWIKFEITESLLLESNQSVLNALNAFNDLGIKVSLDDFGTGQSALA 745 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L + +KID FVK+I +N DA++V++I L + ++AE VET Q LL Sbjct: 746 YLSKFPIHQVKIDYSFVKEITSNPNDALLVKAIIALTATLNKELIAEGVETSAQATLLQS 805 Query: 711 LGVQYLQGYLIGRPQPLA 728 G +Y QGYL +P L Sbjct: 806 YGCRYAQGYLYSKPISLQ 823 >UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Piscirickettsiaceae RepID=Q31EA2_THICR Length = 1289 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 101/463 (21%), Positives = 179/463 (38%), Gaps = 19/463 (4%) Query: 284 GVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 T Y + + + L + + R+ A D LT LPN L Sbjct: 809 KNGTVYPQMITITAIKNSDGMTQNYLALFTDITSLKEQQRQLEHIAHYDALTQLPNRSLL 868 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + +D + ++ +G + + + + +++E + Sbjct: 869 ADRLQQAIFASQRHNSLLAVLFIDLDGFKKVNDLHGHDAGDELLVELSKRMKNILREEDT 928 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQE 449 L ++ G E ++VL + + ++ L S + + + + + Sbjct: 929 LARIGGDEFIVVLVNLDAPSDCEMILRRLLESTSESVDIEGEVVSVSASIGVTFYPKDNV 988 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 L+ Q+ + + Q + N I+ AL++G+ LY Q Sbjct: 989 DADLLMRHADQAMYQAKQSGKNR-YHYFDVQMDSMLQSQSAIQNEIQDALNKGEFELYYQ 1047 Query: 510 PIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P N G + ++ G++ P +FLP I S D V+E+ LK ++ Sbjct: 1048 PKVNLAQNIVIGVEALIRWNHPKKGLLVPIEFLPFIENHPFSVELDQWVMETALKQMSEW 1107 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMY 625 SVN+ L QKN + RL +Y + ++ +E+ E A N + Sbjct: 1108 RAQSLEMSISVNVSAYFLQQKNFIQILERLLSQYSDLPKFSLEIEVLETTALENISNISD 1167 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + G A+DDFGTGY++ L+ L A IKID FV+D++ + D I+ I Sbjct: 1168 LVHICRDMGVNFALDDFGTGYSSLMYLRHLPARTIKIDKSFVRDMLVDMDDRAIIDGILK 1227 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + V+AE VET L +G + +QGY I RP P Sbjct: 1228 LASVFNREVIAEGVETVAHFEALLDMGCEQVQGYGIARPMPAD 1270 >UniRef50_Q1YJA6 Putative diguanylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YJA6_MOBAS Length = 834 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 92/446 (20%), Positives = 177/446 (39%), Gaps = 23/446 (5%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-------FCC 354 L + AL D LT LPN E + C Sbjct: 351 GGGWLDTFEDVTDQYRAQAKLSHMALHDALTGLPNRVQFRDRLEVATRTAAGVANTSVLC 410 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G +R+ LL +++ + + ++ G E ++ + Sbjct: 411 LDLDGFKAVNDTLGHPTGDALLRAAAARLLSCVRQGDLVARVGGDEFSIIQLAGDPHLAA 470 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE-----TLQPLLGQLSWLAEQSC 466 + + + + +G E ++ ++ Sbjct: 471 ASLAQRIVDAFIEPFPIDGRPICVGVSVGIFVTAEMAEAGRAIDADSIIKNADVALYRAK 530 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEIL 523 + E + + L +R A++ + L+ QP + E G++ +L Sbjct: 531 SEGRG-TFRFFEPDMDAGLEARRQLELDLRLAVENEEFALFYQPFVDVERQVVTGFEALL 589 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 G+++P +F+P+ L A VLE+ + A P + SVNL P+ Sbjct: 590 RWHHPQRGLVSPAEFIPVAEDCGLMASIGAWVLETACRQAAAWPSELA---VSVNLSPVQ 646 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +A + R ++ + + +E+TE ++ + + +E+ G I++DDFG Sbjct: 647 FRDPGLADIVEAALARAGLASERLRVEVTESLLLQHSATVLATLERFRDQGIGISMDDFG 706 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L R D IKID FV+++ + + I+R++ L++A LSV+AE VET Sbjct: 707 TGYSSLGYLSRFPFDKIKIDQSFVRNL-DDRENMAIIRAVIGLSRAMDLSVIAEGVETAA 765 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ +L + G + +QGY RP+P + Sbjct: 766 QRDILLREGCREMQGYFFSRPKPADE 791 >UniRef50_C5JAX8 Putative response regulator receiver n=1 Tax=uncultured bacterium RepID=C5JAX8_9BACT Length = 584 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 87/435 (20%), Positives = 167/435 (38%), Gaps = 17/435 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + L QA D LT LPN + + + +D Sbjct: 127 ALTEEIRERRHLEELLREQAEFDALTGLPNRKLFHDRLEQAILMGVRNHRVFALLFVDLD 186 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 ++++ G + + R L ++++++ + +L G E ++L E + + Sbjct: 187 RFKWVNDTLGHDAGDALLIEMSRRLKSVVRKSDTVARLGGDEFTVILVDILHESMAELVA 246 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + + + + ++ L+ Q+ A Sbjct: 247 RKILEQLVQPVTLKGQEVAISGSVGIAIYPVDGDSAVHLVKHADVAMYQAKESGRN-AYR 305 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGI 532 ++ Q +++ + +R A + + L QP I G + ++ D GI Sbjct: 306 FFSSALNEQLVQRMTMEGEMRQACLRDEFYLDYQPKFKITTGRMTGMEALVRWDHPDKGI 365 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKN-IA 590 + P F+ L L + VL + + A + K + +VNL L + Sbjct: 366 LFPQHFIHLAEGNGLIVQIGAWVLRTACRDAARWAEEGFKDLKLAVNLSALQFKDGEKLL 425 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + + + LEITE +N E + +L G I +DDFGTGY++ Sbjct: 426 DLVEESLRETGLPARNLELEITETMMMNNIEQVTATLHKLRALGVSITMDDFGTGYSSLG 485 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+L + IK+D FV D+ ++ D V +I +A+ + VV E VET +Q +L Sbjct: 486 VLKKLPVEGIKVDRSFVNDLTEDSPDTAFVAAILSMARELGVHVVVEGVETAEQLRILVN 545 Query: 711 LGVQYLQGYLIGRPQ 725 G + +QGY P Sbjct: 546 QGGEDVQGYFFSPPL 560 >UniRef50_C8R023 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R023_9DELT Length = 548 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 93/454 (20%), Positives = 172/454 (37%), Gaps = 42/454 (9%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + + DPLT LPN + L+ + + + +D + ++ Sbjct: 78 RQADSQRKHLIHYDPLTGLPNRQLLQLRLEHALAWAKRHRSLLAIHFIDLDRFKEVNDSL 137 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV---LSGPETEGRLQHMVNILNSR 424 G + R L ++ +++ L + G + +L+ ++GPE + + Sbjct: 138 GHQAGDELLLMAGRRLSGILGQDDTLARFGGDKFILLQKTVAGPEEAAVAAQKLLAALAT 197 Query: 425 QIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + +G F + +T LL + +++ Sbjct: 198 PFRVTDQNEIFVGASIGISIFPNDGQTAADLLKNAEAAMYHAKEGGRNQ-FHFYTGLMNI 256 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---------------------------G 516 +++ L N++R AL + +L L+ QP Sbjct: 257 DALERLNLENSLRQALARNELELFYQPKIMLHARPTTADRQAAAAINTAANRDSEWHYPL 316 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRF 575 G + ++ + G ++ P +F+PL + L + V++ L + Sbjct: 317 VGAEALIRWRRA-GELVPPGRFIPLAEKSELIEQIGNWVIDETCHQLKKWRRQGRPELPV 375 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ N+A I ++Y + + LE+TE E ++ +E K G Sbjct: 376 AVNVSARQFRAGNLAEVIAASLQKYQVPAHLLELELTESILMEKPEEAVDLLEACTKLGV 435 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +++DDFGTGY+++ L R +KID FV+D+ + AMI SI LA + VV Sbjct: 436 AVSLDDFGTGYSSFAYLSRFPISALKIDQSFVRDLGHRSEAAMIADSIIGLAHQMGIVVV 495 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VE Q L + G +QGYL P P D Sbjct: 496 AEGVENIVQLDHLRQRGCDQVQGYLFSPPLPAGD 529 >UniRef50_A0L6C9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L6C9_MAGSM Length = 555 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 89/458 (19%), Positives = 177/458 (38%), Gaps = 20/458 (4%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 + + L+ +R + R QA D LT LPN Sbjct: 92 HVEALTIPFQGNERLLVTTLRDISEKKRQEERIRHQANYDALTGLPNRGLFLDRLKLELA 151 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + + +D ++++ G +R + LL ++++ + ++ G E Sbjct: 152 RAKRTDVRVAVMFIDLDRFKWVNDTLGHAAGDDLLREASKRLLSCHRQSDTVARMGGDEF 211 Query: 402 LLVLSG----PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++L P E ++ L + + + F + + L LL Sbjct: 212 TVILPDMARGPHAERVAAQILEQLAA-PFTLEGQEVTISGSVGVTIFPDDADNLDDLLKN 270 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--- 514 ++ + A + + ++ L + +A++ +L L QPI + Sbjct: 271 ADTAMYRAKSQGRN-AYRFYTPDMHAEAMARMALERELSSAVEDQELALCYQPIVDLNTN 329 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KK 571 G + +L G ++P+ F+P+ + L A+ + K Sbjct: 330 RIAGAEALLRWNHPTLGAVSPEVFIPIAEEMGLIAQITEWAVREACTQACQWRSQYGTAK 389 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 SVNL + + +I + + P A++LE+TE + +M + L Sbjct: 390 DFFISVNLTCTRCRELSTDDKIPSILAETQLPPHALVLEVTETILGEDPPKAMAMLNHLK 449 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G R+ +DDFGTG ++ L+ L +KID FV D + + ++V +I ++ ++ + Sbjct: 450 QIGVRLWLDDFGTGSSSLSVLRNLPVCGVKIDRTFVPDALNDKEAEVLVTTIINMGRSLN 509 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ E VET+ Q+ L GVQ QGY G+P A+ Sbjct: 510 RILIGEGVETEAQRLYLEGKGVQLAQGYFFGKPCSAAE 547 >UniRef50_Q2RWS9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWS9_RHORT Length = 1061 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 85/476 (17%), Positives = 176/476 (36%), Gaps = 32/476 (6%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 +N+ + EY+ + + LL + + R QA D LT LPN Sbjct: 583 HNRRKDGTLYWEYASLSPVKDRRGRTTHLLAVKEDITARKETENRLIRQANFDELTDLPN 642 Query: 337 FRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 + +A + + +D+ + ++ G + + ++ + L + + Sbjct: 643 RSLCYSRLKEAIVEAEATASIVGVLFIDLDHFKNVNDSLGHAVGDKLLTAVAQRLREVAR 702 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 + L + G E L++L + + + + + M F Sbjct: 703 PGDTLSRQGGDEFLMLLPDLNGSEAGHGVAQAILTALAPPFSIDGREIYMAASIGITFFP 762 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + LL + A+ + + +++ + +R AL +L Sbjct: 763 RDGRSAAELLRNADSAMYTAKESGRN-AICFFSPEMEIRAAQRLAIEGALRQALAHEELR 821 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 + QP+ + G + +L G ++P +F+ + + L VL+ + Sbjct: 822 VAYQPLVRTSDARPIGAEALLRWTSPTLGEVSPTEFIKVAEETGLIVPIGAWVLDQAVAE 881 Query: 563 LATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS--- 618 A + G + +VN+ ++AG + KR+ Sbjct: 882 AARLRAEGYGAFQIAVNVSVRQFRGGDLAGLVSDTLKRHDFPAA--------GLELELTE 933 Query: 619 ----NAESSMYN-IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + ++ ++ L G R+++DDFGTGY+ LK DI+K+D F++DI + Sbjct: 934 SLLLDVTPAITTTLQSLSALGVRLSLDDFGTGYSALSYLKTFPFDILKVDRSFIRDISSA 993 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + R+I +A+ L+ + E VET++Q A +QG+L G+ AD Sbjct: 994 PDSGALARAIIAMARGLGLATIVEGVETEEQCAFARAEDCDIMQGFLFGKAMTPAD 1049 >UniRef50_Q13IZ7 Putative diguanylate cyclase(GGDEF)/ phosphodiesterase(EAL) with PAS/PAC and GAF sensors n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13IZ7_BURXL Length = 847 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 99/428 (23%), Positives = 173/428 (40%), Gaps = 18/428 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSR 365 E R H A D LT LPN + L A E + + +D+ + ++ Sbjct: 404 EREKARMRIHQLAFHDTLTGLPNRNMFETQAQQLLNDARRTERELALVFIDLDHFKRVND 463 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + R ++++ + L +L G E + +L + +V L + Sbjct: 464 TRGHATGDEVLCETGRRFKSVLRDGDLLGRLAGDEFVAILPHCG-VHQATGIVERLLAAT 522 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + + E + LL Q + A E +S Sbjct: 523 APPVVVAGAPIHASASIGIAMYPADGEHVPTLLRQADIAMYHAKARGRGH-FCFFREEMS 581 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE----GEGYDEILARLKYDGGIMTPDKF 538 +Q +L +R AL L L+ QP + G + +L G + P +F Sbjct: 582 RNIQEQAMLEADLRVALKHDLLDLWYQPQFDAANGHVLSGVEALLRWNHATLGSVPPVRF 641 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLF 597 + L + L V + + LA PR S+NL +A R+ R Sbjct: 642 VVLAEECGLIGELGKWVTQRACRQLADWRARGVEIPRVSINLSASDFRDSTLAERVARTL 701 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + P + LE+TE + + I++LH+ G ++++DDFGTGY++ L RL Sbjct: 702 LAHGLQPHDLTLEMTESVMLGDEPGVLSMIDELHRLGIQLSLDDFGTGYSSLGYLHRLPL 761 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +K+D FV+D+ + + ++ + ++ ++ VVAE VET Q+ L + G LQ Sbjct: 762 DELKLDRSFVRDLDHSDSARALTSTVLRIGESLNIKVVAEGVETDTQRQFLVEHGCPVLQ 821 Query: 718 GYLIGRPQ 725 GYL+ RP Sbjct: 822 GYLLARPM 829 >UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0K3_9PROT Length = 1561 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 95/461 (20%), Positives = 179/461 (38%), Gaps = 19/461 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T Y + L + + + RR D LT LPN Sbjct: 1084 RKDGTHYLEWLTIHTLRDEHGHLTNYIAIFSDITLIKAAQRRLEYMVAHDELTSLPNRNE 1143 Query: 340 LE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L +A + + +DN + ++ + G ++ + L ++ + Sbjct: 1144 LRGRMAQTFARAQRHGGTFALMFIDLDNFKNVNDNLGHDYGDVLLQQVAERLGLCVRTED 1203 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + ++ G E ++L IL+ S+ + + + + E Sbjct: 1204 TVARIGGDEFNVLLDDVSETQIANTAQRILDHVSKPYLIKEQQVFVSASIGIAVYPKDAE 1263 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 ++ L Q+ + + + ++ + N + A+D +L L Q Sbjct: 1264 DIETLTKNADSAMYQAKDKGKD-SYQFFTSDLKEKINHRIEIGNALHKAIDANELKLVYQ 1322 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P N E G + +L GI+ PD+F+P+ + +L V+E + L Sbjct: 1323 PEFNLQTGELIGAEALLRWHSSLFGIVGPDEFIPIAEESDLILELGEWVIEQAARQLNLW 1382 Query: 567 PCDKKGP--RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 VN+ P L ++ + I R +++ + ++ +EITE +++E Sbjct: 1383 RKADTPLPGTLFVNVAPRQLARQPLLAIITRQLQKHRLPSGSLGIEITERTLVNSSEDIS 1442 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + ++ IAIDDFGTGY++ LK +KI F+ I T+ D I +I Sbjct: 1443 VKLHKIELEEIPIAIDDFGTGYSSLSYLKSFPISFLKIPNQFIDGITTDESDKGIATAIH 1502 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 ++ A L +AE +ET+ Q +L ++G Q QGYL+GRP Sbjct: 1503 GVSVALKLQTIAEGIETEDQLIMLREMGCQSGQGYLLGRPV 1543 >UniRef50_B7JX23 Diguanylate cyclase/phosphodiesterase with Chase sensor n=6 Tax=Cyanothece RepID=B7JX23_CYAP8 Length = 872 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 98/425 (23%), Positives = 168/425 (39%), Gaps = 23/425 (5%) Query: 327 LTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 DPLT LPN R L + +Q + L D + ++ G + H + Sbjct: 438 YHDPLTGLPNRRLLIRQIQQVNRSQGSESQKLIAILFLDFDRFKTINDGLGHLAGDHLLM 497 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 I R L Q + ++ G E L L+ + + L S+ +W N + Sbjct: 498 QISRRLQEQSQPQILVGRVGGDEFALCLNQISHAQEVTAFADALQKHLSQPFYWQNQEIY 557 Query: 435 MGYGAAWGR-FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + G LL ++ + E + Q ++ L Sbjct: 558 ITASIGIALECVGQNFQAGELLRYADIAMYRAKELGTAR-HEVFVEGMDTQAVERWQLET 616 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R L + LY QPI + + G++ ++ + G ++P F+PL + L Sbjct: 617 DLRAGLQNQEFQLYYQPIISLKTGKIAGFEALVRWVSNKRGFVSPGDFIPLAEETGLIVP 676 Query: 551 FDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 +L+ + + SVNL Q ++ +I ++ +I + Sbjct: 677 LGQWILQEACQQIQRWHEQFPEIVPLIMSVNLSGRQFTQPDLVKQIQKILDEVNIEGDRL 736 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE ++ E+++ + +L G R++IDDFGTGY++ L R D +K+D FV Sbjct: 737 KLEITESMMMNDVETAIDLLRRLKGLGLRLSIDDFGTGYSSLSYLHRFPVDTLKVDRSFV 796 Query: 668 KDIVTNTLDA---MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 + + IVR+I L L V+AE +ET+ Q +L L +Y QGY +P Sbjct: 797 GRMEEGSDSEKYIQIVRTIISLGHNLDLDVIAEGIETEAQVRVLESLNCEYGQGYYFSKP 856 Query: 725 QPLAD 729 D Sbjct: 857 LSAKD 861 >UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1L5_DESAC Length = 1018 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 102/460 (22%), Positives = 184/460 (40%), Gaps = 16/460 (3%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + EY + + + + + R+ H A D LT LPN + Sbjct: 534 RKNGEEYVSWVTIDTIRDHDGSIKNFFSISSDISQIKEAERQLHQLAYFDTLTGLPNRVS 593 Query: 340 LEQAPEQEA-------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 Q E+ + L ++ + ++ G ++ ++ L ++ Sbjct: 594 FAQKLEEHLTTCDEACNLAVMVLDLNAFKLINESLGPVLADKLLQMFSERLTLCSYDDSF 653 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 + ++ G E +L L + + + + + + ET+ Sbjct: 654 VARIGGDEFAFILRKQRVRSLLDELFECVEA-PFVIGAQRVSLTTSVGIAVAPDDGETVS 712 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL + S + E+++S + +++ L +R A+D G+ LY QP Sbjct: 713 ELLKNANIALY-SIKDIRRNSFSYYEQVMSDRVIERMSLAEMLREAVDNGEFELYYQPKI 771 Query: 513 NKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N + G + +L G++ PD+F+P+ Q L VL + + Sbjct: 772 NLKDGMVVGAEALLRW-HSRDGMVPPDRFIPIAEQTGLILPIGEWVLLQACEQAHIWRQE 830 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 VNL P + + + K + +A+ LEITE + ++++ + Sbjct: 831 YPEFHMGVNLSPAQFDLDYLPRLVADILKEAQLPAEALELEITEGMIIEDIDNTVQILRS 890 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G I+IDDFGTGY++ L RL DI+KID F+ ++ + +V SI LA++ Sbjct: 891 LRDLGVEISIDDFGTGYSSLSYLTRLPLDILKIDRSFMFEVPDSRDSTNVVLSILALARS 950 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L V AE VET+ LLH Y+QGY RP P+A+ Sbjct: 951 LNLKVTAEGVETEDHVTLLHDHRCTYIQGYFCSRPLPVAE 990 >UniRef50_Q8DKE8 Tlr0911 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DKE8_THEEB Length = 1240 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 97/450 (21%), Positives = 180/450 (40%), Gaps = 22/450 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGK 350 V + R + + + AL D LT LPN L++ ++ Sbjct: 789 GRCVEYQCVGRDITCRKQMEEQLIHDALHDALTGLPNRTLLQERLKHCWRQYQRRRDRPF 848 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + ID + ++ G + ++ + + ++++ + L +L G E +++ + Sbjct: 849 AVVFIDIDRFKRVNDSLGHQAGDQLLITLAQRMQTVVRQGDTLARLSGDEFVVLCEDLDP 908 Query: 411 EGRLQHM------VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + + + L + D + LL Q Sbjct: 909 QQMVAQVQAQVTDLERVIQEPLIIDGHLLSVSASIGVAFSDREATSAATLLRDADIAMYQ 968 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + + + + Q L + + A+ +L +Y QPI G + Sbjct: 969 AKKQG-LGQWCIFDPQMHTQAQSCFTLESQLHQAIANSELQVYFQPIVEMKTGAIVGLEA 1027 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KKGPRFSVN 578 + + G ++P +F+ L Q L QVLE ++ + ++ +N Sbjct: 1028 LSRWFDPEKGEISPSEFITLAEQAGLIVSLGRQVLERAIQEFSQWRQQDSRRQTMTLGIN 1087 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + P L+ N I+ +R + P + LEITE N E+++ E+L + G + Sbjct: 1088 ISPQQLVDANFVSDILAALRRAQLPPHLLHLEITETTMIRNLEATLQVAEELQQLGVALN 1147 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ RL +L +KID FV+ + + I+ ++ L K+ L VVAE Sbjct: 1148 IDDFGTGYSSLSRLHQLPIHALKIDRSFVQSLEESQAAQEIIGAVIALGKSLRLDVVAEG 1207 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q A L LG Y QGY P P+ Sbjct: 1208 VETAVQAAQLMDLGCLYGQGYFFYPPLPID 1237 >UniRef50_C9YCS0 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCS0_9BURK Length = 665 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 109/528 (20%), Positives = 197/528 (37%), Gaps = 22/528 (4%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWL-AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 L RR + E + W A+ LL +A ++ + ++ + V Sbjct: 125 RLTRRTQSVIRSGEPLGTLVVWFDASYGQGLLQARRDQMLVLVALQVLAILAVLMPVLVS 184 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGV--ETEYSLAFILAVLISFSVCLLYMVRIYHR 314 ++ P L S L + + Q + L + L L + + Sbjct: 185 RVLRPIERLKEHASALLDHSRDDGPGQVFVWRRQDELGLLGRHLGRVQEELRGLF---TQ 241 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRH 366 N + A D LT LPN A + + +D + ++ Sbjct: 242 LGNKNAQLQQMAFYDQLTGLPNRSLFIDLVQREMLSAQRNQQQFGIFFIDLDRFKAVNDS 301 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---S 423 G + + R L +++E + + + G E L+++ E L M + Sbjct: 302 MGHAAGDALLIEVARRLREVLREVDVVCRQSGDEFLVLVRDIEHWESLGEMAQRVLRSIE 361 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + N + + + + + + L+ Q+ ++ Sbjct: 362 APVVLANAPVKVSASIGISLYPEDGQDFETLVKHADIAVYQAKTLGRAR-YSYFHSELNS 420 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 + + L + A+ L+L+ QP E + ++ G++ P +F+ Sbjct: 421 RLQANLELEQELAYAIGHDQLVLHYQPQVCAKTGEMVAVEALVRWQHPTRGLLYPAQFIG 480 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + A + L + LA +VN+ L + + Sbjct: 481 LAEESGRIAEMGVWTLREACRQLADWSARGIHIGNMAVNVSALEFRDHRLLDSLQAALDA 540 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 I PQ + +EITE + E+S IE+L + G IAIDDFGTGY++ LKRL+ + Sbjct: 541 SGIPPQRLEIEITESVLMAETETSQRIIERLRQIGVGIAIDDFGTGYSSLAYLKRLRPNQ 600 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 +KID FV D T++ IV+ + LA+A SL+VVAE VET++Q+A Sbjct: 601 LKIDRSFVNDTATDSDSRAIVKGVVGLAEALSLNVVAEGVETEEQRAF 648 >UniRef50_Q0AAF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAF1_ALHEH Length = 1023 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 99/462 (21%), Positives = 188/462 (40%), Gaps = 23/462 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 E+ + + + + R+ H A D LT LPN R L + Sbjct: 564 EWQTITAVRDDSGEITHYVATLHDISDRKEAERQVHRLAFYDTLTGLPNRRLLLERLAHC 623 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D+ + ++ +G ++++ L ++E++ L +L Sbjct: 624 LRGNHRSRRQGALLYLDLDHFKAVNDAHGHGTGDRLLQALSGRLSNSIRESDTLARLNAD 683 Query: 400 ELLLVLSGPETEGRLQH---------MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 + L++L+ E + ++ L + + + + + F ++ Sbjct: 684 DFLVLLTDLAEETQAAARGAEAAAEALIKQLEA-PLVMDGEPIHLHASIGITLFRNHETK 742 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + + + Q+ A+ + ++ ++V L +R A+ G L L+ QP Sbjct: 743 PEVAVQEAEQAMHQAKQSGRN-AICFFDPLMQADMLRRVHLERGLRRAVHDGGLTLHFQP 801 Query: 511 IR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + GY+ +L + G + P F+P+ Q L +L++ + LA Sbjct: 802 QVGPDGDILGYEALLRWPHPEQGPIGPGVFIPIAEQSRLIIPLGRWLLQAAARQLAAWAR 861 Query: 569 D--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 D + SVN+ + ++ + + + + LE+TE + Sbjct: 862 DPATRALTLSVNISSVQFRHDDLVAAVREALETTGAPAERLKLEVTESLLMEEPDQVCAT 921 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 +E+L G ++DDFGTG+++ L+RL D +KID FV+ + IV SI L Sbjct: 922 MERLRALGVHFSLDDFGTGFSSLAYLQRLPLDELKIDQSFVQSLEQAPAADAIVGSIIGL 981 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A++ SL V+AE VET+ Q+ L G QGYL G P PLA Sbjct: 982 ARSLSLHVIAEGVETETQRTRLAAHGCHRYQGYLFGAPAPLA 1023 >UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JCS1_NITOC Length = 571 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 91/418 (21%), Positives = 168/418 (40%), Gaps = 12/418 (2%) Query: 323 HLQALTDPLTLLPNFRALEQAPEQE----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 H D LT LPN L EQ + CL +D L+ ++ +G + Sbjct: 141 HHPVQYDTLTGLPNHTVLRNRLEQAMGPARQLALLCLDLDRLKEINDSFGHEAGDRELAR 200 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDM 435 + + L ++ + ++ G E ++ + + + L +R + Sbjct: 201 VAKVLQDCLEPTDTALRIGGDEFAIIQTPALGVDKATLLAQRLLDAIARPHKILGHEIHN 260 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 F + + + LL + ++ + ++ L + Sbjct: 261 SASIGITLFPNDGDKAEQLLKNADIAMYHAKHEGQN-NYQLYTPAINARAHPRMALAKEL 319 Query: 496 RTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 + A + +L L QP N G++ +L G++ F+ L + L Sbjct: 320 QRAFETDNLYLQFQPQLNLATHRTSGFEALLRWRHPQHGMLARQTFIRLAEETGLIVPIG 379 Query: 553 LQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 LE+ + R +VNL P Q ++AG I + ++ ++P A+ +E+ Sbjct: 380 AWALETACQTCMGWRQLRAGPLRVAVNLSPRQFRQPDLAGSIATILEKTGLAPSALEIEV 439 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + +S+ ++ L G +++DDFGTG+A+ LK L D IKID F+ I Sbjct: 440 TEGLLLEDMDSAFNTLQSLSILGVHVSVDDFGTGHASLSYLKNLPFDSIKIDRSFIHGIP 499 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ I +++ L + +L VVAE VET +Q L K G +QGY I +P + + Sbjct: 500 ADSESRTITKAVIALGHSLNLKVVAEGVETPEQLLYLQKQGCDLVQGYFISKPLDVPE 557 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 106/436 (24%), Positives = 173/436 (39%), Gaps = 27/436 (6%) Query: 315 SEWLNRRWHLQALTDPLTLLPN------FR--ALEQAPEQEAGKSFCCLRIDNLEFMSRH 366 + L R QA D +T LPN AL A Q L ++ + ++ Sbjct: 403 QQRLTRLIRHQASYDVITQLPNGIIFNHRLSLALVDAVNQGNMLGVVILDLNQFKRINDS 462 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEK-------LYQLPGSELLLVLSGPETEGRLQHMVN 419 G + + + L + + L + G+ +++LS + Sbjct: 463 LGHGVGDFLLTKVRDRLQNAL---DTYSIFNPLLARWHGARFIILLSKLSYSDESVMVCQ 519 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + + + +G + +T + LL ++ Sbjct: 520 KLLNDFQEPFYVQSQAIYLGASLGIALAPYDGDTAEILLKNAESAMYEAKKQGKN-TYQI 578 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIM 533 S +++L +R A+++ + +L+ QP + + G + ++ G++ Sbjct: 579 YRPG-SDHDKNKLILEADLRKAIERNEFVLHYQPQIDLNTRKLIGVEALIRWQHPSLGMV 637 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGR 592 +P F+PL + L VL + + +VNL L Q +I R Sbjct: 638 SPALFIPLAEETGLICPLGEWVLRTACHQYRIWQKAGFPKIQMAVNLSAFQLQQDDIVAR 697 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + K ++P + LEITE N E +EQL + G +IAIDDFGTGY++ L Sbjct: 698 IAMILKETGMTPSDLELEITETTVMENLEQMTAILEQLKQMGIKIAIDDFGTGYSSLNVL 757 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K L D +KID FV+DI ++ DA + + I L KA L V+AE VET Q L L Sbjct: 758 KHLPVDTLKIDKSFVQDITLDSNDAKLCQGIIMLGKAFELDVLAEGVETFTQLEFLRSLN 817 Query: 713 VQYLQGYLIGRPQPLA 728 QGYLI RP Sbjct: 818 CDRAQGYLISRPLAPD 833 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 54/173 (31%), Gaps = 14/173 (8%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALE-------QAP-EQEAGKSFCCLRIDNLEFMSR 365 + E N + D LT + N + + + S +D+ + + Sbjct: 1084 QLESANLELKKLSCLDGLTQVANRHRFDMYLDQEWRRLMRSQQFLSLILCDVDHFKGYND 1143 Query: 366 HYGLMMRVHCIRSICRTLLPLM-QENEKLYQLPGSELLLVLSGPETEGR---LQHMVNIL 421 YG + C++ + + + + + + + + G E ++L G + + + Sbjct: 1144 TYGHLAGDQCLQQVAQVIKNAVGRPADLVARYGGEEFAIILPDTPLRGALYVAEQIRQQV 1203 Query: 422 NSRQIHWNNTGLD-MGYGAAWGRF-DGNQETLQPLLGQLSWLAEQSCAHHHVL 472 I + + + F + + L+ Q+ A+ Sbjct: 1204 QYLTIPHPQSTHQWVTLSSGVASFIPSAALSPKALINAADEALYQAKANGRNQ 1256 >UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax sp. JS42 RepID=A1W268_ACISJ Length = 1108 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 104/479 (21%), Positives = 187/479 (39%), Gaps = 21/479 (4%) Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 L W + Q + TE + + + + + + + R Sbjct: 621 LPWQGELINRRKNGQVY-----TENASLYPVRDVFGEVTHYVAHMEDITQRREAEERIRA 675 Query: 325 QALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 + D LT L N +A ++ Q S +DN + ++ G + Sbjct: 676 LSNYDTLTGLLNKKAFDEQLTQAIDRADASHERVSVLWFDLDNFKLVNETLGHAAGDELL 735 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ--IHWNNTGLD 434 + L + + + + G ++ + + L Q + + + Sbjct: 736 LEMGNRLRACLAPHIPVARYSGDAFTAIVPLADQAAVALLAQDALAQLQTTLQIHGHAVS 795 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + A + + T L + L + T + + L Sbjct: 796 VSASAGIAVYPDDARTASTLASAAEVAMYRVKQDGRN-GLRFFAPEMQAHTQRSLELAAG 854 Query: 495 IRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 ++ A +G+L L QP R + G + +L G+++P +F+P+ Q Sbjct: 855 LKDAAHRGELFLVFQPQRTLGSGALAGAEALLRWRHPRWGLVSPAEFIPIAEQSGSIVAI 914 Query: 552 DLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 D V+E + + L +VN+ + + ++R+ +R ISPQ + +E Sbjct: 915 DFWVVEQVAQQLRAWDAAGLPPLVVAVNVSAAQFARPHFVEELVRILQRMDISPQRIEVE 974 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE A N E + I +LH+ GFR+A+DDFGTGY++ LKR D +KID FV+++ Sbjct: 975 LTEAVALKNPEQAETTIRRLHEVGFRVALDDFGTGYSSMSYLKRYAIDKLKIDQSFVREL 1034 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ-PLA 728 D IV +I +A + ++ +AE VET +Q ALL G +QGY RP P A Sbjct: 1035 AHQASDQAIVTAIIKMAHSLRMATIAEGVETAEQAALLQACGCDEMQGYWYSRPLEPAA 1093 >UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=Q478L4_DECAR Length = 1665 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 93/464 (20%), Positives = 178/464 (38%), Gaps = 20/464 (4%) Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + ++ + + + + + +R A D LT LPN L Sbjct: 1056 KSGEIFVEQLTISSVRNRDGALSNFVAIFSDITLLKQHQQRLEHLAHFDALTQLPNRMLL 1115 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + C L +DN + ++ YG + + + + L ++ + Sbjct: 1116 SDRMQLAKAQAERSGKTLAVCYLDLDNFKPINDRYGHSVGDFLLIEVAQRLKTCVRAGDT 1175 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E +L+++ + H + + S+ + + + + + Sbjct: 1176 VARLGGDEFVLLITNLDDLNECDHAMTRVISALSQPFRVSAQFVTVSASIGVTLYPHDGS 1235 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 LL + + + + + IR L G+ LY Q Sbjct: 1236 DSDTLLRHADQSMYAAKQEGRNR-YHLFDPENDRRARLRREEIGQIREGLANGEFKLYYQ 1294 Query: 510 PIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P N G + ++ + G++ PD FLP + L+ V++ LK + Sbjct: 1295 PKVNMREGSFIGAEALIRWQHPERGLLLPDSFLPALEGSELAIDIGDWVIQEALKQIDAW 1354 Query: 567 PC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSM 624 S+N+ + L + R+ L Y +++P + LE+ E A + +++ Sbjct: 1355 HRTQGIDLSVSINIAGIHLQHPGFSRRLGELLAAYPNVTPGQIELEVLETAALEDIQTTA 1414 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + G A+DDFGTGY++ +RL AD++KID F+++++ +T D IV + Sbjct: 1415 ELFAECRNLGVTFALDDFGTGYSSLTYFRRLPADMLKIDQSFIRNMLDDTDDLAIVEGVI 1474 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L A V+AE VET + +L LG QG+ I RP P Sbjct: 1475 GLTHAFKRQVIAEGVETVEHGLVLLLLGCDMAQGFGIARPMPPE 1518 >UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XC86_NAKMY Length = 1039 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 92/497 (18%), Positives = 176/497 (35%), Gaps = 23/497 (4%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY--- 307 G+ + L+ ++ + + F + + L +L Sbjct: 524 HADGITPIPPDERPLSRSLRGELVRDVETVFGEPGADRRIVLSSAHRLQDEDGAVLGAVL 583 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 ++ + QAL DPLT L N L Q + L +D Sbjct: 584 VMHDVTERRRVESALIRQALHDPLTDLANRALLGDRLDQAIARQQRQPEPFALLLLDLDG 643 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ L + + + +L G E ++L L Sbjct: 644 FKLVNDSLGHQAGDQVLITVATRLRTSLWAEDTVARLGGDEFAVLLERTCDSQALAIAEQ 703 Query: 420 IL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 +L R + + + G+ +T + +L + + Sbjct: 704 LLGVLRRPVQVHAHTITPDASVGVALSTGD-DTAESMLRNADLAMYAAKDAGKGVV-QVY 761 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMT 534 + +++++ +R A+D+ ++ QPI + + G++ +L G + Sbjct: 762 RASMHESVLQRLIMDAELRLAIDEQQFSVHYQPIISLISGQLRGFEALLRWQHPVRGDIP 821 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAG 591 P F+PL L VL A SVNL + + + Sbjct: 822 PSSFIPLAESSGLIVPLGGWVLREACSQAARWRRLFPPTRSLTMSVNLSVRQIQEPTLVA 881 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ + P + LEITE + + +LH G ++AIDDFGTGY++ R Sbjct: 882 TVLEALTDAGLEPGDLQLEITESTL-DQRNLILGVLHELHDKGIKLAIDDFGTGYSSLSR 940 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L L D +KID F+ +++ + A +V + +A + + AE +E+ Q +L Sbjct: 941 LHTLPVDRVKIDRSFI-ELLAGSNPAPLVAATVAMAHSLGMQTTAEGIESADQLPMLRMY 999 Query: 712 GVQYLQGYLIGRPQPLA 728 G QGY +GRP Sbjct: 1000 GCDDGQGYYLGRPMSAE 1016 >UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH Length = 816 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 85/442 (19%), Positives = 171/442 (38%), Gaps = 17/442 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGK 350 + + + + A DPLT L N L + A Sbjct: 360 RHNTTNYVIAFSDISAIRKAEAQLNHLAYHDPLTELGNRNLLQERLELELKTAQLNHQQL 419 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G ++ + + +++ N+ +L G E L+++ E Sbjct: 420 ALLFIDLDGFKLINDTLGHRAGDELLKLLAERIRRVLRHNDVAARLGGDEFLVLIPFFER 479 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 L+ + L + + + + + + + + L+ ++ Sbjct: 480 PQELERLAEQLLACLREPVELGHERVAVSASIGIALYPEHATSPDTLVSAADSAMYEAKN 539 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILA 524 ++ QT +++ + + A++Q L + QP + + G + +L Sbjct: 540 RGRN-GYLFYTPDMTEQTRERMSMEQGLFKAIEQHQLCVLYQPMTELASNRMSGLEALLR 598 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 G++ P +F+P+ + L + V+ + + PR S+N+ Sbjct: 599 WQHPSEGMIGPTRFIPVAEECGLIEQIGEWVMRTACQQGQAWLAAGLAVPRLSINVSVRE 658 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + R+ + P+ + +E+TE + S+ +L G +IAIDDFG Sbjct: 659 MRSAGYVERVAAILAETGFPPEKLEIEVTES-IIQRVDQSLQLFRRLKALGVQIAIDDFG 717 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TG+++ LK L D IKID FV+ + + + R+I +LA + + V AE +ETQ Sbjct: 718 TGFSSLSLLKSLPIDRIKIDRTFVQALPDDKHSRELCRTIINLADSLGMMVTAEGIETQA 777 Query: 704 QQALLHKLGVQYLQGYLIGRPQ 725 Q+ L L Q QGYL P Sbjct: 778 QRQFLQSLHCQEGQGYLFSHPL 799 >UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Shewanella RepID=B1KIP0_SHEWM Length = 796 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 174/438 (39%), Gaps = 17/438 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRI 357 + ++ + + + QA D LT L N Q + L + Sbjct: 344 VLLLEEVDKRKASENKLAYQATHDELTGLANRTHSMSRLAQSIESAQVNNTKVLVMFLDL 403 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 DN + ++ G ++ + LL ++ + + + G E L+++ + + + Sbjct: 404 DNFKQVNDTVGHHAGDELLKLTSKRLLNSVRNTDTVARFGGDEFLIIIPELPHQNMAKML 463 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + + + + +T LL + ++ Sbjct: 464 ASSILTLFEQAFKIEGQEFFVSTSIGMSIYPQDGDTAATLLKKADTSLYRAKDAGRN-GF 522 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGG 531 + ++ +++ L + A+ D+ +Y QPI + + G + ++ + G Sbjct: 523 SFYNDSMNQDIQRKLTLNVRLHQAISLDDIEIYYQPILDLASRKIIGAEALMRWTDSELG 582 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL-QKNIA 590 +++PD+F+PL + L + VL+ A+ + ++N + + + Sbjct: 583 VVSPDEFIPLAEKNGLIHKLGDIVLQRACSQAASWQS-ITPLKMAINFSSVQFRYSEQLQ 641 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 RI+ + + + + +E+TE M + L + G ++IDDFGTGY+ Sbjct: 642 ARIVEVLAQTGLPADKLDMEVTESLLIDQESGLMTMLAYLKQLGIEMSIDDFGTGYSALS 701 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L++ +KID F+ + ++ D +V +I +AK+ + VVAE +E +QQ L Sbjct: 702 YLQKFSFSKLKIDRAFINKMASSKSDKALVTAILAMAKSLEMKVVAEGIEDEQQAQFLQS 761 Query: 711 LGVQYLQGYLIGRPQPLA 728 G ++ QGYL RP Sbjct: 762 HGCEFGQGYLFSRPVTAE 779 >UniRef50_C4ZM14 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM14_THASP Length = 712 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 103/465 (22%), Positives = 179/465 (38%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y L + + M R + R DPLT N + Sbjct: 225 RKSGEIYPERLALRAVRGADGLPTHYVGMFSDISREKQDQARLDYLTHHDPLTGFANRQL 284 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + +Q E + L +D ++ G ++ + + ++ Sbjct: 285 FMERLQQAVERAAAGEGKAAVLLLDLDRFRRVNESLGQDAGDRLLQVMAERIAGCLKRRS 344 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 L +L E L++++ L + + +R + N L M + Sbjct: 345 SLARLGSDEFLVLITEFTDADALAALARRILDEIARPVTVNGQLLHMSASLGISVHPQDG 404 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + LL Q H L + + + + + + +R AL +G+L LY Sbjct: 405 ADAEHLLQAAEAARAQ-IRHGLGNRLHFFTAGMDTRARRWIEVESELRHALARGELQLYY 463 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + + +L G ++P +F+P+ + L LE+ + + Sbjct: 464 QPIVCVRDGRVRTVEALLRWNSPALGWVSPAEFIPVAEESELIVAIGDWALETACRQVRH 523 Query: 566 HPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R +VN+ L + R+ + +R I P + LE+TE S++E Sbjct: 524 WQDTGLPAVRVAVNVSAHQLAGGRLPERVREVLERTGIDPGQLELELTESAMMSDSEHGA 583 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +E + + G +A+DDFGTGY++ L R +KID FV + + ++IV + Sbjct: 584 RQVEAISRMGVSVALDDFGTGYSSLAYLSRFALTKLKIDRSFVDGLSRDPKSSIIVDATL 643 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ-PLA 728 LA+ L VVAE VET++Q+ALL G LQGYL P P A Sbjct: 644 GLARGLGLRVVAEGVETEEQRALLAAAGCDALQGYLFSPPVAPAA 688 >UniRef50_B6R1T0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1T0_9RHOB Length = 972 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 88/455 (19%), Positives = 177/455 (38%), Gaps = 18/455 (3%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE- 345 + ++ + + + + ++ A D LT LPN + + + Sbjct: 491 LQSEQVILMTLEPQDGGGWVAIFEDITDRQRISDHLSYLATHDALTKLPNRLLMNERLQE 550 Query: 346 -------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 Q+ + +D + ++ G + + + + L + E + +L G Sbjct: 551 MKQAALEQDEHFGILWMDLDEFKTINDSLGHAVGDKLLVHVAKILREKVTNKEMVARLGG 610 Query: 399 SELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++ P + +L+ + + + + + F + + L+ Sbjct: 611 DEFAILSKLPASREQLEQLAKEVLKVVASPCFLEGHEIVVAASVGIAMFSREHQNVDELI 670 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q+ E+ ++ + ++ L+ + A +L +Y QP N Sbjct: 671 RFADLALYQAKNDGRN-TFRFFEDDMAAKIKQRQTLITDLYKATANRELEVYFQPQVNLA 729 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 E G++ +L G ++P +F+PL + L VL+ A P Sbjct: 730 TGEISGFEALLRWNHPRYGFISPFEFIPLAEETGLILEIGAWVLDEACSLAAGWPKR--- 786 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VNL P + + + + + R + P + LE+TE ++ + +L K Sbjct: 787 VNLAVNLSPRQIYCEQLLPVVDDVLARTGLDPGRLELEVTETVLLADHLRVRQTLAKLQK 846 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +I++DDFGTGY++ L+R D IK+D FV + + IV S+ DLA + + Sbjct: 847 SGVKISMDDFGTGYSSLSTLRRFPFDRIKVDRSFVMSMSKDEDAYFIVNSVIDLANSLGI 906 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + AE VE+++ L + G QGY G+P P Sbjct: 907 ATTAEGVESKEIAEQLKREGCTEAQGYYFGKPAPP 941 >UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF4_JANMA Length = 914 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 103/581 (17%), Positives = 200/581 (34%), Gaps = 30/581 (5%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 I F ++ +I ++ W+ + + Sbjct: 322 AAIAITTFLFVFAVIAVVMSLRLAWKSH--RLDAVRNTYRIATEFGNEGYYIWSAIQDRN 379 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE---YSLA 292 + ++ T V + Y + E Y Sbjct: 380 GYLVDFEIIDCNERGATFFGTSKEKLLNTQLSTVEFIRGYLYTLMQQSRIAMEKGFYEDD 439 Query: 293 FILAVLISFSVC---------LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF------ 337 F + + L R + H A D LT LPN Sbjct: 440 FEMQAHNQGWIHKRMLRCEDGLAVTFRDVSDRKAHEEELHRLATKDTLTNLPNRYWLMNH 499 Query: 338 --RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +AL +A E++ + + +D+ + ++ G ++ + L +++ + + + Sbjct: 500 LPKALNEANEKQDSLAVLFIDLDDFKNINDTLGHSSGDSLLQVVASRLESVLRPGDSVVR 559 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E L+L + + + N + + L + R+ + + Sbjct: 560 LGGDEFTLLLESLPLQEDISLIANRIMQTFNQPFEIQQKMLTISASMGISRYPFDGRDAE 619 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL + A ++ + + +V + A+ + ++Y QP Sbjct: 620 TLLKNADIAMYSAKADGKNKV-RVYDKKLYEEIELRVDGERQLARAIQEDHFIVYYQPRV 678 Query: 513 ---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-C 568 G + ++ + G++ PD F+PL + V+E + +A Sbjct: 679 EAQTGRMVGMEALVRWAHPERGLIAPDHFIPLAESTGMILPLGRLVMEKVFCQIAAWQFQ 738 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 SVN+ + N++ I +Y + P+ + +E+TE N E I Sbjct: 739 KLAVVPVSVNVSARQFDEGNVSEFIASCLNKYAVDPRFIEIELTESAMMGNFEQVRGEIS 798 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 + G +I +DDFGTGY++ L + D++K+D F I + SI +AK Sbjct: 799 SISALGIQIHVDDFGTGYSSLSLLYKFNMDVLKVDRAFTSQICNGKGGEIFFSSIVSMAK 858 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + VVAE VET +Q +L +LG +QGYL+ +P P +D Sbjct: 859 VLKMRVVAEGVETIEQLRVLQQLGCDEIQGYLVSKPIPSSD 899 >UniRef50_B2JE89 Diguanylate cyclase/phosphodiesterase n=58 Tax=Burkholderia RepID=B2JE89_BURP8 Length = 791 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 89/424 (20%), Positives = 164/424 (38%), Gaps = 15/424 (3%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQE-------AGKSFCCLRIDNLEFMSRHYGLMM 371 R D LT L N + Q+ E + + +DN + ++ G Sbjct: 328 EREMTHLVEFDLLTGLRNRYSTLQSLRHEVGQPVNVGHLAILFIDLDNFKTVNDTLGHNA 387 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 ++ L + + L ++ G E ++V+ G + E R + + ++ Sbjct: 388 GDIVLQMTASRLADAVADAGALSRIGGDEFVVVIKGDDVEKRAVTLAEAIIDVFAKPFEV 447 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + E+ LL + + +S + Sbjct: 448 RGSSFVLHASIGIALYSVANESEIDLLKKADLAMYSAKDAGKN-CYQFYSPHLSHRADHL 506 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + +R AL L L QP + G++ ++ G++ ++F+P+ Sbjct: 507 MKWEQQLRVALADQQLFLAYQPKIDLARRCITGFEALVRWNHPQHGLIPANEFIPVAEST 566 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L V+ + + LA +VN+ + + ++ I + I+ Sbjct: 567 GLIVPIGDFVIRTACRQLAQWQQQGYDTLSLAVNISAVQFWRGDLYETISHAIEETGIAA 626 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LEITE + I L + G RIA+DDFGTGY++ L R D +K+D Sbjct: 627 RRLELEITETAMMEYPDLVSEKIFALKRLGVRIALDDFGTGYSSLSYLNRFSVDTLKVDR 686 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+ I + ++V +I +LA++ L+VV E ET++Q A L LG QG+L RP Sbjct: 687 SFVQAIPGDRSVCVMVTAIVNLARSLGLTVVVEGTETEEQIAWLAALGHIEAQGFLFSRP 746 Query: 725 QPLA 728 P Sbjct: 747 VPAE 750 >UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodobacter sphaeroides RepID=Q3J1Y6_RHOS4 Length = 833 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 85/483 (17%), Positives = 168/483 (34%), Gaps = 27/483 (5%) Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLYMVRIYHRSEWLNR---- 320 A+ + + + + + Sbjct: 330 AMRRRIAYTNEFRIRRKDGGWCWVIDVGHPRLLADGTFIGYIGCCVDISARRQAEDDRVM 389 Query: 321 ---RWHLQALTDPLTLLPNFRALEQ-------APEQEAGKSFCCLRIDNLEFMSRHYGLM 370 + A D LT LPN + E + L +D + ++ G Sbjct: 390 AQLQVFHMARHDMLTGLPNRHYFGDCYQEAVASLAPERSVAVLMLDLDGFKTVNDTRGHP 449 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 + + + L ++ + + +L G E ++ + +E + L S+ Sbjct: 450 VGDQVLCEVANRLRTSVRSTDTVARLGGDEFAVIQTPIRSEQEACDLARRLIAAISKPFD 509 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 ++G G+ ++ + ++ + +E Sbjct: 510 LEGAVPEVGASVGIAFARGHGDSAEEIMRYADVALYAAKQAGRG-TFRVFDEATDTHLQS 568 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + + +R AL G+L ++ QP+ + + + ++ + G +TPD+F+PL + Sbjct: 569 RQKMKAALRAALGLGELSVFYQPLIGLRDGQVTACEALMRWHRKGAGWITPDQFIPLAEE 628 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL A P +VNL PL + ++ + + P Sbjct: 629 AGLIGDMGDWVLHEACAQAARWPD---SVSVAVNLSPLQFHGGALVDQVASALRASGLPP 685 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LEITE + ++ ++ L G +I +DDFGTGY++ L+ D IK+D Sbjct: 686 ERLQLEITESVLLDPTDRNIGVLQDLRALGAKIVMDDFGTGYSSLGYLRSFPFDKIKVDR 745 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F++D+ I++++ L ++ + E VETQ Q GV QGY RP Sbjct: 746 SFIRDLPDAREALAILKAVAGLGRSLDMRTTVEGVETQAQLDCAIAEGVDEAQGYFFSRP 805 Query: 725 QPL 727 P Sbjct: 806 LPA 808 >UniRef50_A4G2W5 Putative uncharacterized protein n=2 Tax=Herminiimonas arsenicoxydans RepID=A4G2W5_HERAR Length = 783 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 99/498 (19%), Positives = 202/498 (40%), Gaps = 26/498 (5%) Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 +++ L Y + + +++ + LL Y++ Sbjct: 283 YLMSRLVDRHQGYLWRAIAVSIAVVFLLCGLLMIASRQRRLYNVLTASEQEK-------- 334 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDN 359 + + + E R LQA D LT +PN R +A + L +D Sbjct: 335 -LNLISQLEQEKSRALLQASHDYLTGVPNRRLFYEMAATELARAKRSRKLYALFFLDLDK 393 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ + R L ++E + L +L G E ++++S +E + + Sbjct: 394 FKLINDTLGHAVGDLLLQGVARRLRESLREYDLLARLGGDEFVILVSEMASESDIARVAA 453 Query: 420 ILNSR---QI-HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L +D+ + + + ++ LL + + Sbjct: 454 KLVDVVRDPFLDLGGNDIDVSPSIGIALYPRDGQDVETLLMHADLAMYSAKSAG-AATYR 512 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 + ++ + ++ LL+ + A+ + L+ QP + G + ++ + G+ Sbjct: 513 FFDTSLNASSARETELLSRFKRAIKDDEFCLHYQPRVELQNFSVLGLEALIRWNHPEHGL 572 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAG 591 + P+ F+ L +L V+++ + LA ++N+ L + Sbjct: 573 IYPNDFISLAENNDLIVPLGNWVVDAACRQLAVWRGQGLPIVPVAINVSSRQLKDDTLLE 632 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ +Y I+P+ + +E+TE + +++ +EQL K G +IA+DD+GTG++ + Sbjct: 633 TVMTTLAKYQIAPEMLEIEVTESCFIEDFDAASQVLEQLQKNGIKIALDDYGTGFSGLKN 692 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK L IKID F++DI + DA+IV S LA L VVAE VE+++Q L Sbjct: 693 LKILPIYAIKIDRSFIRDIRNDNSDAVIVASTISLAHNLGLQVVAEGVESKEQLVHLKTA 752 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QG+ RP + Sbjct: 753 GCDQVQGFYFQRPVAATE 770 >UniRef50_A4Y0T1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Pseudomonas RepID=A4Y0T1_PSEMY Length = 765 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 96/475 (20%), Positives = 173/475 (36%), Gaps = 23/475 (4%) Query: 275 LNYNQNFLQGVETEYSLAF--ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 L++ + + + + + + + H A DPLT Sbjct: 267 LHHEYRIRRRDGSYLWVLVRGVAETCSGGVRRIAGSQSDISQRRAAQEQLHHAARHDPLT 326 Query: 333 LLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 L N L + +Q + + +D + ++ G + + + L Sbjct: 327 GLANRARLGELLQQALQRQQRPGAREAALLFIDLDRFKLINDSLGHQIGDRVLVEVAERL 386 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 ++ + L + G E + +L G + + + + L + Sbjct: 387 SHCLRPGDHLARFGGDEFVALLDDLACMGDAERVAQRMLDSLHPPLRLQEQTLAVTASIG 446 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 L PL ++ + + Q +Q+ L N + A Sbjct: 447 IAALQERGHPLDPL-QAADLALYRAKSAGKAQFAR-YSSELQQQAQRQLELQNALAQACS 504 Query: 501 QGDLLLYAQPIRNKE-----GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 G+L L QPI + G + +L ++P +F+P + + V Sbjct: 505 CGELRLVYQPICRLDQGQPVLMGVEALLRWQHDGRE-ISPLEFIPCLEESGEILAVGDWV 563 Query: 556 LESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + + R SVNL L Q + A R+ + + + +++LEITE Sbjct: 564 LRQACTQVRAWQLAGQTQLRCSVNLSSRQLQQGDFAARVADVLRETGLPAASLVLEITES 623 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 Q ++ ++ + +L G ++A+DDFGTGY++ LKR IIK+D F+ + Sbjct: 624 QLMQDSAQNLACLRELASLGVQLALDDFGTGYSSLGYLKRFPLHIIKVDKSFIAGTPQDA 683 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I R+I L + L+VVAE VE Q Q L + G Y QGY RP+ D Sbjct: 684 ESLAISRAIIGLGHSLGLTVVAEGVEQQAQIDFLGREGCLYAQGYWFSRPRSPDD 738 >UniRef50_B5VVW5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Arthrospira maxima CS-328 RepID=B5VVW5_SPIMA Length = 852 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 86/416 (20%), Positives = 166/416 (39%), Gaps = 17/416 (4%) Query: 328 TDPLTLLPNFRALEQ---APEQE---AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 D LT LP L Q + + ID ++ +G + + S + Sbjct: 424 YDILTDLPTRTLLNQKIQRLSHHPKSTQIALLFVDIDRFRLINEGFGHAIGDQLLISTTQ 483 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 + + L ++ G E +++ + + M N L + + N + Sbjct: 484 RMKKCLSSQTILARVGGDEFAVMMPNIKNIDQAIAMANKLQKALAAPFYLNGQQVYTTIS 543 Query: 439 AAWGRFDGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + NQ+ LL ++ A + +Q+ L +R Sbjct: 544 IGIAYSNQNQDLIANDLLRDAHTAMYRAKALG-NSRYQVYISTMKSHALQQLQLEADLRE 602 Query: 498 ALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A+ + LY QPI N + G++ ++ + G ++P +F+P+ + L Sbjct: 603 AIKNQEFQLYYQPIMNLKTNQIAGFEALVRWISPQRGFVSPGEFIPVSEESGLIIPLGEW 662 Query: 555 VLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 +L + LA S+NL Q N+ + ++ + + + LEI Sbjct: 663 ILLEGCRQLAIWNQKYCQNPPFMLSINLSTRQFSQVNLIECVDQILTQTGVDRSCIKLEI 722 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + + ++ +E+L G ++++DDFGTGY++ L R D +K+D FV+ + Sbjct: 723 TESAIMDDVDEAIALLERLKALGIKLSMDDFGTGYSSLSYLHRFPIDTLKVDQSFVRRMD 782 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + + IV++I L ++ +VAE +ET+ L L +Y QGY +P P+ Sbjct: 783 DSQQNTEIVKTIIMLGHNLNMDIVAEGIETEGNVQTLKNLNCEYGQGYFFSKPLPV 838 >UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E09_THICR Length = 665 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 93/459 (20%), Positives = 198/459 (43%), Gaps = 21/459 (4%) Query: 289 YSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 Y + + + + + MV+ + R + + QA TD L+ L N L + Sbjct: 198 YYQSNVPSKFKLRELEYIRSSMVQTFDRLDNEKNELYRQARTDNLSGLANRNHLNERINW 257 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + +DN + ++ G + + ++++ + ++++ + + ++ G Sbjct: 258 LISEYSRTGQEFAVLFMDLDNFKTVNDMLGHEVGDNLLKNVSTIIQEVLRDYDIIARVGG 317 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++VL+ ++ L H++N + S ++ + + F + + + L+ Sbjct: 318 DEFVIVLNYYQSNFELTHVINRILDRISEVHMVDSHPVKVSASIGIVCFPKDGDNISTLM 377 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 ++ E + Q ++ L ++ AL + LY QP Sbjct: 378 KNADIAMYEAKNSGKNR-FKFFTESLHKQVIGEIQLEQDMQRALKNNEFELYFQPKICVN 436 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK- 571 + G + ++ G++ P+ F+P + L VL++ ++ T Sbjct: 437 DGSVVGAEALVRWNDPKKGLVPPNDFIPAAEKTGLMVPLGHWVLKTAIQQQVTWKEQGLA 496 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 + S+NL P+ LL ++ L + + P + +E+TE Q N E +++++ + Sbjct: 497 DLQISINLSPVQLLDTLFDRKLQALINQSGVDPTKLDIEMTESQFMENTEQNLHSLSTMR 556 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI-VRSITDLAKAK 690 K G I++DDFGTGY++ LK+ D +KID F+ D T + I + +I +A Sbjct: 557 KQGINISLDDFGTGYSSLAYLKKFPIDTLKIDKTFIDDYATESG--AIFIETIVKIAHTL 614 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L+VVAE +E + Q L + G + QGY P P+++ Sbjct: 615 NLNVVAEGIEQEAQLNYLVQTGCETYQGYYCSAPLPVSE 653 >UniRef50_B3PCW8 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCW8_CELJU Length = 850 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 102/494 (20%), Positives = 195/494 (39%), Gaps = 16/494 (3%) Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + G + + + + +G + + ++ + + + Sbjct: 338 LGQPLSESGSTNYLFDLDTFIANGYQMVDHDITRQDERGKKFYFQISCTGIIEDGYLRRI 397 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRID 358 + + + Q+L D LT LPN L Q E + + +D Sbjct: 398 WGTTKDVTTRKRYEDKLRHQSLHDSLTGLPNREKLYQDMASCFEQRTAEQISALMLIDLD 457 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN-EKLYQLPGSELLLVLSGPETEGRLQHM 417 + ++ G + ++ I L M E + +L G E + L + + Sbjct: 458 RFKEINDTLGHNVGDRLLQMIGPRLAAEMAEVPGTVARLGGDEFAVFLPRIRSTHQAVVF 517 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + +++ M + L+ + + +L L Sbjct: 518 GHRILDALAQEYDLEVFCTQMSASIGIAIAPYQAQDHHALMRYADIAMYYAKSQ--MLGL 575 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGG 531 + K++ +++ + A+ + L LY QP G++ ++ + + G Sbjct: 576 SIYSPDYDPHSPKRLAMMSELGRAIRENQLCLYYQPKVVLDECRCYGFEALIRWIHPELG 635 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 + PD F+P+ +L VLE+ ++ +VNL L+ +NI Sbjct: 636 FVPPDDFIPIAEFTSLIHPLTAWVLENSIEQCRHWQLQGLNLSVAVNLSARNLMDENIPK 695 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + RL +Y + + LEITE S+ ++ ++ LH+ G ++IDDFGTGY++ Sbjct: 696 LVERLLNKYQLPAARLELEITESSIMSDPNRALRILQHLHELGVHLSIDDFGTGYSSLAY 755 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL +KID FV++++ + D +IV S LA L+VVAE VE ++ LH + Sbjct: 756 LKRLPVQTLKIDNSFVRNMLGDLQDELIVNSTIHLAHNLGLTVVAEGVENEELMKRLHDM 815 Query: 712 GVQYLQGYLIGRPQ 725 G +QGY IGRP Sbjct: 816 GCDEVQGYFIGRPM 829 >UniRef50_C8QI11 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pantoea sp. At-9b RepID=C8QI11_9ENTR Length = 732 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 94/428 (21%), Positives = 164/428 (38%), Gaps = 20/428 (4%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + A D LT LPN +E + + + +D + ++ YG Sbjct: 305 ASEAQAQHLAFHDVLTGLPNRSMVEDRLSQALAMAARYDHRVALLLIDLDRFKTINDTYG 364 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 I + L +++ ++ + ++ G E ++V+ + G++Q + + S Sbjct: 365 HHAGDELIIQVGHRLTSIVRASDTVGRIGGDEFIIVMPDVDNIGQVQSLAKRIISALSEP 424 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + +G + Q L+ + ++ E ++ Sbjct: 425 YQLFGSEAWIGASIGLALAPKDGLDRQELMRKADIALYEAKNSGRGQFRQF-ERVMDESL 483 Query: 486 TKQVLLLNTIRTALDQ-GDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPL 541 + + +R AL L ++ QP I + +G + +L + G + P +F+ + Sbjct: 484 RTRQQIAADLRQALLHFDGLAVWYQPLMEISGQRVDGVEALLRWQHPERGEVPPGEFIAI 543 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL K +VN+ P+ R+I + + Sbjct: 544 AEETGLIIPLGEWVLREACKT----SLRLPQLIVAVNVSPVQFRASGFVERMIEIVQSEG 599 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 PQ + LEITE + + NI L GFRIA+DDFGTGY++ L D IK Sbjct: 600 ADPQRLELEITEGVLIEDEHEARNNIIALRSAGFRIALDDFGTGYSSLNYLSTFPVDKIK 659 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F + + A I+ S+ L A L V AE VET+ Q + L G LQGYL Sbjct: 660 IDRSFTQSLGVAQNSAAIIESVVRLGHAMGLMVTAEGVETEGQMSALADAGCNQLQGYLF 719 Query: 722 GRPQPLAD 729 + P + Sbjct: 720 SQAVPFEE 727 >UniRef50_C5SQE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQE4_9CAUL Length = 622 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 89/481 (18%), Positives = 178/481 (37%), Gaps = 21/481 (4%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 + L ++ + ++ ++ L ++ S Sbjct: 136 LMQLLEYLAIPKTGHSEGEYVWPSGRTVRVSRTG----VEGGGYLDVIADITESHLARAT 191 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT L N ++ + + L +D + ++ YG + Sbjct: 192 IERMANFDALTELANRNLFQKRLADLVARASARSMAAILSLDLDRFKAVNDLYGHGVGDA 251 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNT 431 + + R L+ +++ + +L G E ++L + L S + Sbjct: 252 LLAKVARRLVDVLRPGDLAARLGGDEFAVLLEKVSAHHDAHQVAKRLVSHLSAPYEIDGL 311 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + +G D L+ + + + + ++ + Sbjct: 312 EIVIGASVGIEFIDDPHAAPIDLMRHADQALYAAKRSGRND-IAVYDAKLHETYLERQQI 370 Query: 492 LNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +R A + L QPI + GY+ +L GI++P++F+P+ + + Sbjct: 371 EADLRKAAQSREFFLVYQPIFCVKSARVCGYEALLRWQSPVRGIVSPNEFIPVAEETGII 430 Query: 549 ARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 V+ K A P +VN+ P+ + + R + I+P + Sbjct: 431 EEIGSWVIRKACKDAAALPEHT---TIAVNVSPVQFRSRAFVSVVTRALQDSRINPNRLE 487 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 +EITE +A ++ + L G RI++DDFGTGY+++ + D IKID FV+ Sbjct: 488 IEITEGVMIGDAGEALKILRALKALGVRISLDDFGTGYSSFSYISAFPFDKIKIDQSFVR 547 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D+ + I+R+++ + + + AE VET+QQ +L +QGYL G+P L Sbjct: 548 DLGQRSESLAIIRAVSGMCSSLGIVSTAEGVETEQQFEILRTEHCDTMQGYLFGKPVALN 607 Query: 729 D 729 + Sbjct: 608 E 608 >UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MI55_ALKOO Length = 737 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 94/425 (22%), Positives = 181/425 (42%), Gaps = 16/425 (3%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + H A D +T LPN L + +Q+ L +D + ++ G M Sbjct: 304 EKVHNLAYYDGITKLPNRVYLLKILGECIDSANDQKNRFGILNLDLDRFKHINDTLGHHM 363 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 ++ + + +++ N + G E ++++ + + L + N + + Sbjct: 364 GDEILKLVGERIGRILKPNNFFARFGGDEFIILVKHIQEDKELIDLANQIIKEMDQPFML 423 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N+ L + + ETL L+ + ++ +S + + Sbjct: 424 NSHRLFLTTSIGISIYPEGGETLNDLMKNSDIAMYAAKGKGGNQYY-IYDKSLSEKQMEA 482 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 ++L+N +R A+D +L L+ QPI N G + +L + G++ P+ F+PL + Sbjct: 483 LILINQLRNAVDHDELTLFYQPIMNTSTGNIVGVEALLRWYQPGHGMIGPNTFIPLAEET 542 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 +L V ++ + R +N+ +K I++ K + P Sbjct: 543 DLIISIGKWVFRNVCAQIKDWIHRGYDVKRVYINVSAKQFQEKGFLESILQALKEAELPP 602 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + +EITE + + ++ I++L G I+IDDFGTGY+N+ LK + D IKID Sbjct: 603 KYIGIEITETVIIQDIDHTIELIKKLKDIGISISIDDFGTGYSNFNYLKEMGVDEIKIDR 662 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F+ + N+ I ++I LA ++V AE VET++Q L + +QG+ RP Sbjct: 663 SFIAETTKNSKKRAITKTIILLAHQLDIAVTAEGVETKEQLEFLRESSCSKIQGFYYSRP 722 Query: 725 QPLAD 729 P + Sbjct: 723 VPPEE 727 >UniRef50_Q4ZXA9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZXA9_PSEU2 Length = 748 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 118/706 (16%), Positives = 226/706 (32%), Gaps = 81/706 (11%) Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 A ++ G + WL +V+ G + I T Sbjct: 31 SCTAALLMVSSATGWEQLVSCGQSLLKADEAWLRMVSSYGDVVLVGQDSPAN----AIQT 86 Query: 156 FFGDADAIFTVVD------LLSLFTAVLIYNMLFYYLTR--MIVSPHFAQILWR-----R 202 I+ + L ++ + M+ R + + + Sbjct: 87 NSPGTTLIYVAIRGFRHELLGAMLLSNSDGAMVLSAAQRYALQAQAVHIRTYLQPGRDPE 146 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA---GYLVPVFFIIFTLGVGKL- 258 P + +R L + + +L+ D Y P F I ++ Sbjct: 147 ANNPLVTSFERLRLLESVVINANDAILITEAEPIDLPGPRIVYCNPAFLAITGFTEEEVI 206 Query: 259 -RYPFLNLTWAVSTLCLLNYNQNF------------LQGVETEYSLAFILAVLISF---S 302 R P + S L + + +++ + + + + Sbjct: 207 GRTPRILQCEDTSRATLDIIREALSHWRPVEVELLNTRKDGSQFWVELSIVPVANEKGWF 266 Query: 303 VCLLYMVRIYHRSEWLN---------------------------RRWHLQALTDPLTLLP 335 + + R + A D LT L Sbjct: 267 THWVSVQRDITERKESQQLAQRARLEWEEKLALQSRLEERERMSEELTYIAFHDELTSLF 326 Query: 336 NF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N A E + + L +D + ++ G + ++ + L + Sbjct: 327 NRAYLMNELTTAFETRKSRYERATVLFLDLDGFKVVNDSMGHLAGDQLLKGVANRLQTCV 386 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRF 444 + N+ L ++ G E ++L G + M + S+ I + + Sbjct: 387 RSNDVLARIGGDEFAILLMGKDQPETAVKMAERIVSQLNTAIQIEGQDIFISCSIGIVSA 446 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + LL + + +++ N +R AL+ D Sbjct: 447 GESHTKPEELLRDADVAMYSAKKQGRGR-WSIFNTSMREAAIDTLMIQNALRQALEDKDF 505 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L++ QPI + G + ++ GI++PD F+P+ + V+ Sbjct: 506 LVFYQPIYSGNCEHLVGVEALVRWNHATMGIISPDAFIPIAEDLGIIHELGAWVMHKACS 565 Query: 562 WLATHPCDK--KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + + R +VN+ L R+ R+ + + +E+TE Sbjct: 566 EVQAWRKEFSHLDLRLNVNVSGKELSHPGFVDRVTRIIASTGLPATQLQIEVTESVFLYQ 625 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 ++ + Q+ + G R+A+DDFGTGY++ + R D +KID FV ++T I Sbjct: 626 PDAIAEILRQIRQLGVRVALDDFGTGYSSLGYIDRYPIDAVKIDRSFVSRMMTYERSEAI 685 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 V SI L +A +L + AE VET +Q LL K+G Y QGYL+ RP Sbjct: 686 VSSILSLGRALNLDITAEGVETAEQYNLLRKMGCPYFQGYLLNRPM 731 >UniRef50_B0KTQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Pseudomonas RepID=B0KTQ2_PSEPG Length = 861 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 116/578 (20%), Positives = 207/578 (35%), Gaps = 39/578 (6%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCT 232 + L + R + + ++ E+R ++ A+ + L Sbjct: 273 VMLYLCRHALRSSRAVGLTLLHLQQSNQALEASEQRFRAVAESASDWIWETDRQQRLTYL 332 Query: 233 PYENDFIAGYLVP--VFFIIFTLGVGKLRY--PFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + GY V + + L P+L++ L N + Sbjct: 333 SQRFANVTGYPVDDWLGHPLNQLLACDTTPLSPWLDVLTTADPQQLANLRCTYRDPNGQN 392 Query: 289 YSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + ++ + R +L DPLT L N L + EQ Sbjct: 393 RYCRISARAIWHDGKALGFRGTASDITDEVDAHARIQHLSLHDPLTGLANRNKLARHLEQ 452 Query: 347 EAGKSFCCLRID------------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + D N + ++ G ++ + L ++ + + Sbjct: 453 ALLRGN-----DSPPLTLLLLDLDNFKPINDSLGHAAGDAVLQEVATRLRDTTRDGDLVA 507 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E +LVL G + + L + I ++ L +G + Sbjct: 508 RLGGDEFILVLGGMDNRSEIDRFCARLIGLLQQPIIFDGQQLHIGASIGVAQTRTQGFDA 567 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ Q+ A ++ Q + L N +R AL + +L+ QP Sbjct: 568 GELIRCADIALYQAKADGKN-TWRYFAAEMNQQIQYRRQLENDLRRALRNQEFVLHYQPR 626 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L G++ PD F+PL Q ++ VL + P Sbjct: 627 YRLGDLRIVGVEALLRWQHPQEGLLGPDTFIPLAEQSDIIVALGRWVLREACRTAHDWPN 686 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 D SVNL P L+ ++ + + Q + LEITE ++ E ++ + Sbjct: 687 DVL---VSVNLSPAQFLRSDVVADVREILLDTAFPAQRLELEITENVMLNDIEGALGTML 743 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN-TLDAMIVRSITDLA 687 L + G R+ +DDFGTGY++ L+ D IKID F+ + N D +V++I +L Sbjct: 744 SLKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFISGLNNNGGSDRAVVQAIINLG 803 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +A L+V AE VE++QQ L K +QGY + RP Sbjct: 804 EAMGLTVTAEGVESEQQLKALEKDRCHEVQGYYMSRPL 841 >UniRef50_Q0AIM6 Diguanylate cyclase/phosphodiesterase n=35 Tax=Betaproteobacteria RepID=Q0AIM6_NITEC Length = 706 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 129/687 (18%), Positives = 243/687 (35%), Gaps = 41/687 (5%) Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY-------VWQR 124 N W LS + + + + + R +L W G + + Sbjct: 3 ATYNSWLVGLSLVVAMLASYTALDLSGHISVLTRPRLRYTWLAGGAAAMGIGIWSMHFVG 62 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + L TP+G L S + T+ L L L+ + Sbjct: 63 MLSFSLPTPLGYDFVTTGYSLVIAMLLSYSVLYVVTQTKLTISRL--LIGGTLMGFGISG 120 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 ++ P L ++ A + +L + +A + Sbjct: 121 MHY---TGMAAMEMQPAIHYDPLLFVTSIVIAIAAANAALWIAYILSDADQVHLVAKRIG 177 Query: 245 PVFFIIFTLGVGKL------RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 F + + +P + + + + + + L+ Sbjct: 178 ASFLMGIAITGMHYTGMAAAYFPPGSTSSTANDIDSQWLATTIILLTFLILIITLTLSRY 237 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGK 350 + + L V LN + A D LT LPN RA+E + Sbjct: 238 DARANFLTGSVS------RLNDQIVRMATFDALTDLPNRWTLIERMERAIEISRRDGNMF 291 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G +++ LL ++ ++ + +L G E + +L T Sbjct: 292 AILFMDLDGFKIINDSLGHSTGDEVLKAFALRLLHCVRGSDTVARLGGDEFVALLENIAT 351 Query: 411 EGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 M + + SR + NN L + F + +T++ LL ++ Sbjct: 352 TDDASEMADSILSRMRQGLWANNQPLQVMPSIGITLFPQDGDTVEKLLKNADAAMYEAK- 410 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 E ++ T+ + + + AL G LY QP N E G + +L Sbjct: 411 RGGRSTYRFFETSMNEAATRALQIQRVLHEALKVGYFSLYFQPKFRGSNSELVGAEALLR 470 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 + G+++P +F+P+ + V+ + L D + ++NL P Sbjct: 471 LRHPEFGLLSPMEFIPIAERSGQIIPIGYWVVRETCQQLRRWKEDGLPAIKVAINLSPRQ 530 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L Q ++ ++ + + I + ++ EITE A +A + I + + F IAIDDFG Sbjct: 531 LEQPDLITMMLDIVQSEQIPCEQIMFEITETVAMQDAPKTTDMIHKFQENNFEIAIDDFG 590 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 TGY++ L+R +A +KID F + + IV +I LA + VVAE VET Sbjct: 591 TGYSSLAYLQRFRAKQLKIDRFFTSGMDECGPEGSAIVSAIIKLAHTLGMDVVAEGVETD 650 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + +QG+L+G+P + Sbjct: 651 SQLTKLKSMMCDEVQGFLLGKPVTADE 677 >UniRef50_A1U786 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U786_MARAV Length = 755 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 93/433 (21%), Positives = 164/433 (37%), Gaps = 16/433 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + + TD LT L N R + Q + + +D + + Sbjct: 304 IDQRKAIQVDLQRLESTDTLTGLANRRFFMEDLAHTINIADRQMRQIALVMMDLDRFQML 363 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + G + + L L E + G E ++ + + H++ + Sbjct: 364 NDSLGHQFGDELLIKVSERLNGLSNERVLVAYSGGDEFMVCQQQVDDIDDVIHLLGQIKQ 423 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + LL ++ E Sbjct: 424 CFAAPFEVQGEAHSITATMGVAVYPQSGLDADTLLRNADIALYRAKEQGRN-TYQFYTEG 482 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 + + ++ L + AL + +LY QP N E + ++ G++ P + Sbjct: 483 MQDREVLRLELDRDLSQALANDEFVLYFQPQLNLDTGEINSVEALIRWQHPVRGLLPPVE 542 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + V+ + + LA + R +VNL L ++ I Sbjct: 543 FIPLAEESGRITEIGRWVVLAACRQLARWKGTPCEHLRVAVNLSGRELDDDSLIDHIRST 602 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P + +E+TEE N E ++ + QLH+ G +AIDDFG GY++ L+ Sbjct: 603 LASEAVDPSRLEVELTEEIFIQNIEHNLNQLSQLHQLGVHLAIDDFGVGYSSLGYLRDFP 662 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D++KID F+ D+ DA+I R++ +LA + VVAE VET++Q L Sbjct: 663 VDLLKIDRSFITDVTERHDDAVITRAVINLAHNLGIQVVAEGVETEEQLNFLKAHRCNLA 722 Query: 717 QGYLIGRPQPLAD 729 QGYLI RP P AD Sbjct: 723 QGYLISRPIPAAD 735 >UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacillus RepID=B9IRT3_BACCQ Length = 909 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 121/740 (16%), Positives = 250/740 (33%), Gaps = 45/740 (6%) Query: 13 IFTLAFT-LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 T T L LI ++ PL+++ L S L ++ Sbjct: 171 QLTYPMTDLLFFLIGINLLFKPLSLLPKKVGALLG-------SALILY-----ATTDAIY 218 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAIL--------RWQLGTRWRYGLTSRYVWQ 123 + S + +V AC + + L ++ + + Sbjct: 219 AYIKYFTPEYSMFTITPLYQVTLVLVAIACILHTKEPERQEQVLLTPKFGEAIRLSLPYI 278 Query: 124 RLFWLGLVTPIGIKCSMYLV---GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + L + + + +V F F L + + I + + Sbjct: 279 SVVMLIVFILVEYVFAPIIVIGLMITFSFVLIRHSLVRKQNKILLLAQMQFNSELEKQIE 338 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + L + Q +++ ++ L N+ + Sbjct: 339 LRTEDLVEQKNELYHNQQMFKSLYEHHPDPIFTLDLYGNFLKVNNAGTTLLGYQTNELLN 398 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 P + + + + ++ F + S + + + L Sbjct: 399 ---QPYYSLTYEEDLEEIVNAFHRVKKGKSISLEIRAYHK--NRDIYYLHVTAVPIFLKD 453 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSF 352 + M++ S+ + + A D LT L N RA Q EQ + Sbjct: 454 HISGVYLMIKDITESKQQQEQINFLAYHDTLTELANRRAFHQYVEQAIARSKISKMPFAV 513 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D + ++ G + + ++ + L + N KL +L G E +++ + Sbjct: 514 MFLDLDRFKVINDTLGHRVGDLLLIAVAKRLESIATPNMKLARLAGDEFTILIENYKKRP 573 Query: 413 RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 ++ + + + + N L + + E +L ++ Sbjct: 574 DVKKIADTIVAAMNEPFEIENQHLQISPSIGIAIYPEAGEDPLSILQHADMAMYEAKNKG 633 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + + + + ++ + + AL + L QP + K+ G + +L Sbjct: 634 KNGS-SLYTKELYKKMERKARIEKDLPLALVNEEFYLVYQPQIDITTKKIIGAEALLRWK 692 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLL 585 G + P +F+P++ + VL + L + SVNL Sbjct: 693 HPLLGDIPPCEFIPIVEETPQVIPLGHWVLNESCRQLKIWHTFGYKDLKISVNLSAKEFQ 752 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q N+ I+++ + P+ V LE+TE A + + ++ ++QL ++G + +IDDFGTG Sbjct: 753 QNNLIENILQIITDVKVDPKDVTLELTERIAMIDEKETLSKLKQLKEYGIQTSIDDFGTG 812 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L D +K+ F + + IV +I LA +LSVVAE +ET++Q Sbjct: 813 YSSLAYLSIFPIDTLKVPREFTQLADHRPEERAIVSTILSLANTLNLSVVAEGIETEKQL 872 Query: 706 ALLHKLGVQYLQGYLIGRPQ 725 L K +Y+QGY +P Sbjct: 873 KFLQKNNCKYMQGYYFSKPL 892 >UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8L0_MAGSM Length = 714 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 87/453 (19%), Positives = 180/453 (39%), Gaps = 17/453 (3%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------ 346 ++ L + +VR + + + D LT LPN EQ Sbjct: 249 TMIEDLNGTPQSYVVVVRDLSYQDSSIKGARTASHEDALTGLPNRSLFADRLEQVLTHAK 308 Query: 347 --EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D ++ G + + + + ++ + + ++ E + Sbjct: 309 RSGEKVAVILLGLDGFRKINDSLGHQIGDQILTIMAQRFQTNLRGGDTVARMGSDEFGFI 368 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + + ++ + S I ++ L G + L+ Sbjct: 369 ARDLISTQSILSVLGKIKRTLSAPIKIADSELVFTAGIGISVTPDDSLETDTLIRYADAA 428 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN----KEGE 517 ++ A + + +K++ L +R A++Q +L L+ Q + + Sbjct: 429 LGRAKAGGGN-IFTFFTQTMEQNASKRLHLEGRLRKAIEQEELTLFYQAKISCEDSPKIS 487 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFS 576 G++ ++ + +G I++P F+P+ + L V++ + +A S Sbjct: 488 GFEALVRWITPEGDIISPGDFIPIAEETGLIIPLGSWVIDRTCRDIAHLQALGFPPVVVS 547 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 NL P +Q + + + ++ I P + LEITE + + + ++ L G Sbjct: 548 ANLSPRQFVQDGLLQVVQQALVQHGIDPCWLELEITESSVMGSVDQATELLKSLVALGVH 607 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IA+DDFGTGY++ LKR +K+D FV+ + + D I+++I LA+ L VVA Sbjct: 608 IALDDFGTGYSSLAYLKRFPFHTLKVDRAFVQTVEKDRADQAILQAIVSLARNLELQVVA 667 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VE + Q+ + + G +QG+ +P PL++ Sbjct: 668 EGVENEGQRDFITQAGCHSIQGFYYSKPLPLSE 700 >UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT Length = 595 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 85/434 (19%), Positives = 171/434 (39%), Gaps = 19/434 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMS 364 + + + A D LT L N + E++ + + +D + ++ Sbjct: 154 DLKQIQEKLSFHARQDTLTHLVNRSVFLERIDLALKRFHEEEDYLFAVFVIDLDRFKMIN 213 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR 424 G + + + R L L+ + + + ++ G E ++L + + Sbjct: 214 DSDGHQVGDLLLVEVSRILESLVSQADTVARVGGDEFAILLDPIRDVNEALKLAQNIKEA 273 Query: 425 ---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + + + +L ++ + + + Sbjct: 274 LTTSFFIQGRQVFISSSIGLTFSESSYNSALEILRDADIAMGKAKQKGRGK-YEIFNQEM 332 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 Q + L +R +++ + +Y QPI N + G++ ++ D G ++P +F Sbjct: 333 HTQALNLLTLETDLRYGIEKQEFEVYYQPIMNLNPIKLVGFEALIRWQHPDKGFISPGEF 392 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 +P+ L VLE + + + T + +VNL I I Sbjct: 393 IPVAENTGLIIPIGKIVLEKVCQQIQTWKKKFQQITILKIAVNLSSKQFKNAYILQEIDE 452 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + +R ++ + LEITE +++ ++ ++QL + I +DDFGTGY++ L R Sbjct: 453 VMERTGLTSNNLKLEITETSLIDHSQETIKLLKQLKQRNLEICLDDFGTGYSSLSYLHRF 512 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID F+ I + I++SI LA ++VVAE +ET++Q L KL + Sbjct: 513 PVDTLKIDRSFINCIGQPEENLEIIQSIIHLAHNLGMNVVAEGIETEEQLIYLQKLNCDF 572 Query: 716 LQGYLIGRPQPLAD 729 QGYL RP + Sbjct: 573 GQGYLFNRPLTAQE 586 >UniRef50_B1XK84 Two-component response regulator (ABC transporter) / (GGDEF domain protein) n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XK84_SYNP2 Length = 868 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 118/607 (19%), Positives = 234/607 (38%), Gaps = 31/607 (5%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 + + + F + L + F ++++Y + ++ + + + RR+ + Sbjct: 243 YQAIAQWLEPPETFNWLSLQNFFFSLIVYLPFLFLGWFILRNYSLKKEIKRRNQIETNLL 302 Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK----------LRY 260 E + + +S+ + +E ++ Y + I + K + Y Sbjct: 303 ESQQRYANLANTVSIGIFRTNLRHECIYVNDYYCKLLAIQPEEALHKGWLEKVYPDDIDY 362 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETE---YSLAFILAVLISFSVCLLYMVRIYHRSEW 317 +++ L F + + Y + + Sbjct: 363 VREQWLKSITNQELFTLEYRFQRSDGSILWVYGQGTAELDSKGEPQGYVATITDISTRIK 422 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYG 368 + ++ AL D LT L N L + + L +DN + ++ G Sbjct: 423 MEQQLKHDALHDRLTGLANRNLLIERLNLALKRYKRYPIHEFAALFLDLDNFKVVNDSLG 482 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 ++ + + L +++ + +L G E +++L H+ + + + Sbjct: 483 HVVGDELLIEVAHLLKSFIRDTDVAARLGGDEFVILLEEIHGVEDAVHIADRILNALNMP 542 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 +N G+ + D E+ Q LL ++ + + + Q Sbjct: 543 FQISNYGVFITTSIGIIIGDSRHESAQDLLRDADIAMYRAKQNGKSQ-YAIFDPQMHLQA 601 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ L IR+A+++ +LY QPI N E EG++ ++ G+++P +F+ + Sbjct: 602 MQRLQLEGEIRSAIEEKQFVLYYQPIINLEQGNIEGFEALIRWQHPQRGLLSPYEFIDVA 661 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L +L++ + L K + VNL L Q ++ + RL +RY Sbjct: 662 EETGLIIPLGEWILDAACRQLFEWQQAFKTPLKVHVNLSVKQL-QDSLLFSLDRLLERYP 720 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P + LEITE N + + + Q+ G I++DDFGTGY+ L +L D +K Sbjct: 721 VFPNTLGLEITESMLIQNIDITCRLLNQIRLKGVFISVDDFGTGYSCLSYLHQLPIDALK 780 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV N + +I SI L+K+ + VAE +ET+QQ L Q+ QGYL Sbjct: 781 IDRSFVNISELNDRNRVIAESILALSKSIGIKTVAEGIETKQQYQWLKSQDCQFGQGYLF 840 Query: 722 GRPQPLA 728 RP L Sbjct: 841 SRPVSLD 847 >UniRef50_A9CI56 GGDEF family protein n=5 Tax=Rhizobiales RepID=A9CI56_AGRT5 Length = 694 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 118/658 (17%), Positives = 228/658 (34%), Gaps = 41/658 (6%) Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 VV+C T LF G+ I + + V Sbjct: 21 VVVCMLGSFVTMRLFSKARLATGLQKVNWLFLAGVNGGAAIWTTHF-VAMLGYVAAGDVG 79 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA- 214 + + ++ + + I Y R ++ IL A Sbjct: 80 YDPYLTGLSLLIAITTTTAGFGISA----YGGRSVLVEAGGTILGLGIAAMHYTGMAAYN 135 Query: 215 --FTLSW----------LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 + W L ++ + + + Y F I+ + Sbjct: 136 VQGMIFWDQAYVIASLVLGSVLGAIAVNRIARPLNRFCQYSAVAFLILAIASMHYTGMAS 195 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRW 322 ++ + + N + G ++A L +L + ++ R+ Sbjct: 196 MSFAFDPRIIIPENLLPPAIMGGG---AIAVTLLLLALGLSTYVI---DAQSTQQAVARY 249 Query: 323 HLQALTDPLTLLPNFRALEQAPEQEAGK-------SFCCLRIDNLEFMSRHYGLMMRVHC 375 +L DPLT +PN A + + + + +D + ++ +G Sbjct: 250 RHLSLHDPLTGIPNRAAFIEHLNRRTRHISMGAHTALLSIDLDRFKEINDVHGHAAGDAV 309 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTG 432 +R+I +++ E L ++ G E + + T L S+ + WN Sbjct: 310 LRAIADRASSVLKAGEFLARMGGDEFVAMTHSYYTRADGAEFAQRLIEQISKPVEWNGQT 369 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 +G + L+ Q ++ + ++ + + L Sbjct: 370 FSVGASVGISVRNTGSIDADTLMAQADVAMYRAK-SATSDTICFYDKSMDEAARARNALA 428 Query: 493 NTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R+ L + LY Q + G++ +L + G+++P +F+P+ Q Sbjct: 429 IAMRSGLANNEFELYYQQQNDTKSGSIVGFEALLRWKHPERGMVSPVEFIPIAEQTGFIV 488 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL A K +VN+ P L + ++ R+ ++P+ + L Sbjct: 489 ELGEWVLREACAQAARWK---KSLAIAVNVAPQQLADNDFPDKVERILAETGLAPERLEL 545 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE ++ ++ I +L G +IA+DD+GTGY++ L+ D IKID F+ Sbjct: 546 EITEGSIIADHRHALVTIRKLKSLGVKIAMDDYGTGYSSLSTLQSFPFDKIKIDRAFIDG 605 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + TN IVRS LA + ++ V+AE VET+ L + G +QG+ G+P PL Sbjct: 606 LSTNVQSEAIVRSTLILAHSLNIPVLAEGVETKAHIEFLRREGCLQVQGFFFGKPGPL 663 >UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q0HLF7_SHESM Length = 684 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 90/428 (21%), Positives = 179/428 (41%), Gaps = 20/428 (4%) Query: 317 WLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYG 368 + A DPLT LPN L +++ ++ + + +D + ++ G Sbjct: 240 QTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFALMFIDLDRFKNINDSLG 299 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + + I R L ++ + + +L G E +++ + + V+ L + Sbjct: 300 HALGDQFLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPDQAADFVDKLLVQLNVP 359 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 I N + + + + + L+ + A ++ ++ + Sbjct: 360 IQLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQ-WAFFKQQMTERA 418 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ ++ AL + LLY QP + + G + ++ K +++P F+P+ Sbjct: 419 AVRLRTEASLHDALKNNEFLLYFQPKLDLQTGKITGCEALIRWQKDGR-LISPISFIPVA 477 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + + V+E + L ++N+ ++ I ++ RY Sbjct: 478 EETGIIIPIGRWVIEQSCRVLREWQKKYNFAIPIAINVASQQFADASLVSDIKQMALRYQ 537 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I P+ + +EITE ++ E ++ +EQL GF IA+DDFGTGY++ L+ L +K Sbjct: 538 IQPELLEIEITETSLMNDIELAINKLEQLKSAGFGIAVDDFGTGYSSLSYLRHLPITTMK 597 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV D+ D+ I +I L K +L++VAE +E +QQ L + Q QG+ Sbjct: 598 IDRCFVSDL---PEDSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKRNQCQIGQGFYF 654 Query: 722 GRPQPLAD 729 +P P A+ Sbjct: 655 SQPLPQAE 662 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 99/428 (23%), Positives = 177/428 (41%), Gaps = 16/428 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGL 369 L+ + D LT LPN L + Q + + L ID+ +S Sbjct: 126 KLDELIDYISNYDKLTGLPNRELLRERVNQALSQQYSQKMVAVMVLGIDDFTGISHALEH 185 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQI 426 +R++ + L + + + L L G E + + + + +L S + Sbjct: 186 EQSNLLLRAVGQRLTSCLAQKDILAHLSGDEFAIARVEIPSIESIVKLSQLLLSALNKPF 245 Query: 427 HWNNTGLDMGYGAAWGR-FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + N + LL Q Q+ ++ Q Sbjct: 246 TIKGDQIHITASIGITINQPDNLHDVDQLLQQAHVALYQAKQQGRSQ-HQFYSPEINAQL 304 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ L N + AL + ++++Y QPI + + + ++ G+++P KF+P+ Sbjct: 305 QERLALENELHGALQRNEIVVYYQPIIDLQTQQITAVEALVRWQHPTRGLVSPAKFIPIA 364 Query: 543 AQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L VL + R SVNL + N+ + + + Sbjct: 365 EANGLIVEIGEWVLRTACLQNRAWQLAGLPPIRMSVNLSARQFEESNLVELVGEIIQESG 424 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P + LE+TE ++ + S+ ++QL + G +A+DDFGTGY++ LKR +++K Sbjct: 425 LHPSYLELEVTESSLMADIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLK 484 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D+ +N A + +I LAK+ L + AE +ETQQQ + L K G Q QGY Sbjct: 485 IDRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYF 544 Query: 722 GRPQPLAD 729 G P P + Sbjct: 545 GIPAPANE 552 >UniRef50_A4C531 Sensory box protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C531_9GAMM Length = 725 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 77/455 (16%), Positives = 165/455 (36%), Gaps = 19/455 (4%) Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 + L + ++ + + QA D LT LPN + Sbjct: 257 VGEALRDEHGYPTRMVGSMVDITLKHQSQQMIWQQANFDHLTGLPNRNMFTERLKQEISE 316 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + + +D+ + ++ G + + L +++E++ + ++ G E Sbjct: 317 SKRYQQKFALFFIDLDHFKEVNDTLGHGAGDQLLIEVAERLQLILRESDTIGRIGGDEFT 376 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++ + + L + + + + F + E + LL Sbjct: 377 ALIPHINQTCDIDSLAQKLIQTIELPFYIDGESIFISASIGITLFPDHSEKIDELLKFAD 436 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 +S + + Q L + A+ + + QPI +++ Sbjct: 437 QAMYRSKENGRKR-FSYFTFAMQEQADHTRNLTQELHLAIIEQHFHVVYQPIMALPSRKI 495 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRF 575 + ++ + G+++P F+PL + + V + K + Sbjct: 496 TKAEALVRWDHPELGLISPADFIPLAERSGVIIEIGNWVFYNAAKQALKWQQEIDPSFEI 555 Query: 576 SVNLMPLTLL--QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 S+N P+ N + + L K + + + +EITE + + + Sbjct: 556 SINRSPVQFQNPDPNADQKWVELLKNLGL-IKGICIEITEGLLLDDTQGIKDKLLYFQNN 614 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G I++DDFGTGY++ L + + +KID F+ D+ N + + +I +A L Sbjct: 615 GMDISLDDFGTGYSSLSYLTKFDINFLKIDRAFINDLEHNQNNQALCEAIIVMAHKLGLK 674 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VE+Q+Q L + ++QGY I +P A Sbjct: 675 VIAEGVESQRQLDFLAQAQCDFVQGYFISKPISAA 709 >UniRef50_Q1K008 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K008_DESAC Length = 995 Score = 551 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 96/567 (16%), Positives = 198/567 (34%), Gaps = 23/567 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC---TPYE 235 R I R A + + + C E Sbjct: 410 GEPCVLTAVRDISERREKDQRLRELSAVVDHSNDAVMIMDDSGNVLAVNKTFCDLSGYSE 469 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 D + +P+F L + + + + + Sbjct: 470 EDLLNR--LPLFLRAERHDRVFYTDLVKQLRDEGRWEGEIWIRHHRGHSLPQWLRIETVE 527 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---- 351 + + + + + + A TDPLT N +Q ++ Sbjct: 528 EP-ENKTTRYVAVSADLSEEKAWEEKMLQLAQTDPLTGSANRVLFRDRLQQAIKRAQSRK 586 Query: 352 -----FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 L +D + ++ G + + + L + + + + +L G E ++++ Sbjct: 587 GMEVQVFSLDLDYFKRINDSLGHVAGDRMLIEVAARLKRVSRGQDTISRLSGDEFAILVT 646 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 E M + S + + L + + G+ + L+ Sbjct: 647 CLNDEVDATRMAQKMLQAISEPMMIDGAELIITASIGVALYPGDGDDDVTLMANADNAMH 706 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 Q+ + ++ + + + + + +R AL+ +L LY QP + + + Sbjct: 707 QAKRQGRSR-MCYFSAELADKAQEYLTIESKLRRALENSELQLYYQPQVDLATGDIVAAE 765 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNL 579 +L + G ++PD+ +P+ + L ++E + + H +VN+ Sbjct: 766 ALLRWHSDELGWVSPDRMIPVAEEGGLIIALGRWIIEECCRTIRGYHRSSGNWFPIAVNV 825 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L+ ++ + + Y I P + LE+TE + ++ ++ L GF+IA+ Sbjct: 826 SARQFLEPGFTDELVEIVRFYDIPPSLLELELTESMMLDDVGKAIETMKALSFKGFKIAL 885 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY + LK+ +K+D FV D+ + DA I ++ + LS+VAE + Sbjct: 886 DDFGTGYTSLAYLKQFPVSKLKLDRAFVTDVHRDVNDAAIAEALVTFTRVMGLSLVAEGI 945 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQP 726 E Q L+ +G ++ QGYL RP P Sbjct: 946 EESVQHECLNLMGFRFGQGYLFSRPLP 972 >UniRef50_A7K1J3 Sensory box/GGDEF family protein ScrC (Involved in swarmer cell regulation) n=13 Tax=Vibrionaceae RepID=A7K1J3_VIBSE Length = 776 Score = 551 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 89/433 (20%), Positives = 170/433 (39%), Gaps = 17/433 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFM 363 R + + QA D LT LPN L +A + + +D+ + + Sbjct: 335 IERRKASEKELAFQAKYDTLTNLPNRSYGSERLALELIRASRSGSKVLVMFIDLDHFKQI 394 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + ++ + L + ++ + L ++ G E LLV+ + + + + S Sbjct: 395 NDSMGHFVGDEILKLSAQRLHQVARKTDLLARIGGDEFLLVIPDLPDNDTAKRVASSVLS 454 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 WNN + F + + + LL + A Sbjct: 455 AFNDPFVWNNHEFFLSSSVGMSVFPDDGDNAEQLLACADMAMYRVKQDGRD-AFCFYNHN 513 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 ++ + + L N +R A+ L LY QPI + + G + ++ G + P++ Sbjct: 514 MNQDLQRYLDLENRLRNAISSQLLELYYQPIIELSSGKIVGAEALMRWNDEKYGFVNPEE 573 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ-KNIAGRIIRL 596 F+ + + L + ++ + A SVN + + I + Sbjct: 574 FISIAEKNGLIHQIGEFAIQQACRQAAQWQS-LTPLFVSVNFSSVQFRYCDRLLAFIKKS 632 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + +E+TE F++ + + L G ++ IDDFGTGY+ L++ Sbjct: 633 LEESGLPSDKFDIEVTESLLFNHDSELLDMLNNLRALGTKLTIDDFGTGYSALSYLQKFP 692 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F++++ N D +V I +AKA +L +VAE +E Q+ L L ++ Sbjct: 693 FDRLKIDRSFMQNMFENDSDRELVNVIIAMAKALNLKIVAEGIEEQRHVDYLKGLNCEFG 752 Query: 717 QGYLIGRPQPLAD 729 QG+ RP P D Sbjct: 753 QGFHYSRPLPAKD 765 >UniRef50_C7LQB7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Deltaproteobacteria RepID=C7LQB7_DESBD Length = 556 Score = 551 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 82/422 (19%), Positives = 161/422 (38%), Gaps = 19/422 (4%) Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 A D LT LPN L + L +D+ + ++ G + Sbjct: 122 HLSYMAEHDLLTGLPNRALLTDRLVQSILLAKRHGNKVALMFLDLDHFKHINDSLGHGIG 181 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWN 429 ++S+ + L ++ ++ + + G E +++L E H L + Sbjct: 182 DQLLQSVAKRLQASVRNSDTVSRHGGDEFVVLLPEVEDVQSAAHAAEKLIHSVGEPHFIS 241 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS--GQTTK 487 L + + + + L+ + Q+ + ++ + Sbjct: 242 GQELRVTLSVGISMYPDDGVDAEALMRKADMAMYQAKKAGRN-SYKIFTPSMNPSSSSAM 300 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + ++ ALD G+ +L+ QP N E G + +L + D + P +FL + Sbjct: 301 RKSAEMALKRALDHGEFILHYQPTVNLETGVITGAEVLLRWERSDHQLNFPAQFLTIAES 360 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L V+ + R +VN+ + KN + + + + Sbjct: 361 CGLILPIGQWVIRESCRQAQAWLQTGFNLSRIAVNVSAVEFRDKNFLTGVRAILRETGLD 420 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + +E++E +A+ ++ + L G +IA+D+FGTGYA+ L+ +KID Sbjct: 421 PHFLQIEMSENGLSRDAQQALPALHALKNLGVQIAVDNFGTGYASLSFLREFPIGTVKID 480 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV +I + + ++ +A+ + +VAE +ETQ Q A K QGY +GR Sbjct: 481 KSFVHNIEAKSG-KAVASALLAMARGFNHQIVAEGIETQTQHAFFKKHHCAEGQGYYLGR 539 Query: 724 PQ 725 P Sbjct: 540 PM 541 >UniRef50_A4ADN7 Sensory box EAL/GGDEF family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4ADN7_9GAMM Length = 796 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 93/447 (20%), Positives = 174/447 (38%), Gaps = 32/447 (7%) Query: 311 IYHRSEWLNRR--WHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNL 360 + R A D LT LPN + + A + IDN Sbjct: 317 DSAEQKVTETRSKLRHAAYFDNLTSLPNRKLFTEQLTLLLRLAQRGNQNVGLLHVDIDNF 376 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL-------------YQLPGSELLLVLSG 407 + ++ G +R + L +++++ L +L G E +VL+ Sbjct: 377 KRINDSLGATAGDQLLREVSERLAAGVRDSDVLHRGTDDESSLMDLSRLGGDEFTVVLNH 436 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 E+ + + + L + + + + + ++ LL + Sbjct: 437 IESIDMAKRVADRLASSIAEPYLIDRQEVIVSSSIGIALAPDHAADVETLLRAANTAMVN 496 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + + ++ + +++ L N +R A++ LLL+ QP + G + Sbjct: 497 AKKRGRNRVV-IYDDSMESANRERLQLENDLRRAVELDQLLLHYQPQVDALDGRVTGAES 555 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLM 580 ++ G++ P K++P+ + L VL L + SVN+ Sbjct: 556 LVRWNHPKQGLIPPFKWIPIAEEMGLIEDVGEWVLRRACADLVELRAQGHSLPKVSVNVS 615 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L + + + + P+++ +E+TE SN ES + ++ L G R++ID Sbjct: 616 ALQFHDE-FVATVSSALQDSGLPPESLEVELTEGIMVSNQESVVSMVQNLKDLGIRLSID 674 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L R D +KID FV + + D +VR+I +AK+ L +V E VE Sbjct: 675 DFGTGYSSLSYLTRFPLDELKIDRSFVLGLAKGSQDVELVRAIIAMAKSLGLEIVVEGVE 734 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPL 727 + GV +QG+L +P PL Sbjct: 735 RMEDLEFFLGQGVSVIQGFLFSQPVPL 761 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 102/437 (23%), Positives = 179/437 (40%), Gaps = 22/437 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPN------FRALE--QAPEQEAGKSFCCLRIDNLEF 362 I + + H QA DP+T LPN AL A + ++ + Sbjct: 414 ILTQQRLTH-LIHHQASYDPITQLPNWIIFNHRLALALVDATHGSNMLGVLIIDLNQFKR 472 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQE----NEKLYQLPGSELLLVLSGPETEGRLQHMV 418 ++ G + + ++ L ++ L + G+ +++LS + Sbjct: 473 INDSLGHGVGDYLLQKASDRLQNCLESYSFLEPLLARWHGAGFIVLLSQLAYVDEAINFS 532 Query: 419 NILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L + + + +G + ++ + LL Q+ Sbjct: 533 QKLLNDFQEPFYVQSQAIYLGVSIGIALAPYDGDSSEVLLKNAESAMYQAKQQGKN-TYQ 591 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 + +++L +R A+++ + +L+ QP + G + ++ G+ Sbjct: 592 LYRPGSNQDFN-KLILEADLRKAIERNEFVLHYQPQIELATGKLIGVEALIRWQHPCLGM 650 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAG 591 ++P F+PL + L L++ + +VNL L Q +I Sbjct: 651 VSPALFIPLAEETGLICPIGEWALKTACHQYQIWQQAGLPKIQMAVNLSAFQLQQYDIVA 710 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI ++ + I+P+ + LEITE N E IEQL + G +IAIDDFGTGY++ Sbjct: 711 RIAKIIQETRINPRDLELEITETTVIQNLERMTSIIEQLKQMGIKIAIDDFGTGYSSLNV 770 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK L + +KID FV+D+ + DA + ++I L KA L V+AE VET +Q L Sbjct: 771 LKHLPVNTLKIDKSFVQDLSNDPNDAKLCQAIIMLGKAFKLEVLAEGVETIKQLEFLKNC 830 Query: 712 GVQYLQGYLIGRPQPLA 728 G + QG+LI RP P Sbjct: 831 GCDHAQGFLISRPVPPD 847 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 55/173 (31%), Gaps = 14/173 (8%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALE-------QAP-EQEAGKSFCCLRIDNLEFMSR 365 + + N + D LT + N + + S +D+ ++ + Sbjct: 1120 QLQNANLELKKLSAIDGLTQVANRHRFDVYLEQEWRRLMRSRHSLSLILSDVDHFKWYND 1179 Query: 366 HYGLMMRVHCIRSICRTLLPLM-QENEKLYQLPGSELLLVLSGPETEGR---LQHMVNIL 421 YG + HC++ I R + + + + + + G E +VL +G + + + Sbjct: 1180 TYGHLAGDHCLQQIARVIKTSVGRPADLVARYGGEEFAIVLPETSLKGALFVAEQIRQKV 1239 Query: 422 NSRQIHWNNTGLD-MGYGAAWG-RFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + I + + + + L+ Q+ A+ Sbjct: 1240 KNLTIPHTKSAYQCVTLSLGVASLIPSGALSPKALINAADEALYQAKANGRDR 1292 >UniRef50_C7RTE0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RTE0_9PROT Length = 714 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 106/558 (18%), Positives = 202/558 (36%), Gaps = 32/558 (5%) Query: 201 RRDIAPSLGKEKRAFTLSW---LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 R A L + A +L L ++ A L + Sbjct: 140 RLAHAQRLARMGSWEWSVAEARFACSDEMLRLFGGDWQLAGAA-TLDGFLASVRESDRAL 198 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 + L + Q + Y A + V + + + Sbjct: 199 VASARRALLIDGQPYQITYGMQRPDGKLREVYEQAQAVRDTAGRIVRVEGITQDISERIE 258 Query: 318 LNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGL 369 +R ++ D LT L N + E+A + L ID+ + ++ G Sbjct: 259 AQQRIEHLSMHDGLTGLANRQLFAQVAAVELERARRNHGSCAIVHLDIDHFKSVNDALGN 318 Query: 370 MMRVHCIRSICRTLLPLMQENE------------KLYQLPGSELLLVLSGPETEGRLQHM 417 + ++ L ++ + + ++ G +++ G + Sbjct: 319 AAGDQVLCTLAERLRSSVRGADLLALNPSMRAAETVARIDGDAFTVLVLEVRAAGDAAII 378 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 L +R + ++ + + F + ++++ L + Sbjct: 379 AERLLQTIARPLSIDDREVVLTASIGIAVFPRDADSVEALARAAEQALY-AARASGPATY 437 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 +E ++ ++ L N +R A+ Q +L L+ QP + G + ++ G Sbjct: 438 RFFDEEMNAAARVKLHLENELRRAIAQDELRLHFQPKVDAASGRLSGAEALVRWQHPRRG 497 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIA 590 ++ P +F+PL + L VL + + L R S+NL + L++ +A Sbjct: 498 LLGPGEFIPLAEEAGLIVALGDWVLAAAARQLRQWAEAGLAPVRVSINLASPSFLEEQVA 557 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + I+P+ V+LE+TE +AE ++ + L + GF +++DDFGTG+++ Sbjct: 558 EKCSAIIAQEGIAPEQVVLELTESLLVVDAERTIVRLNSLREKGFALSLDDFGTGFSSLS 617 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D +KID FV D+ DA I SI +L + VVAE VET+ Q L Sbjct: 618 YLKRFPLDELKIDRAFVTDVTRGGKDAAIALSIIELGHQFGMRVVAEGVETRAQADFLLA 677 Query: 711 LGVQYLQGYLIGRPQPLA 728 QG+L P P Sbjct: 678 NRCPIQQGFLFSPPLPPD 695 >UniRef50_C5V3A5 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3A5_9PROT Length = 852 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 95/522 (18%), Positives = 190/522 (36%), Gaps = 22/522 (4%) Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 +L + V ++ L +L P +L + + +Y+ + Sbjct: 310 LNAMLNASRSQFLLLLVAVAVTTLLLMRYLIRRRLELPLNSLMEQIRKIERQDYSASDEV 369 Query: 284 GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 E L I A + + L + + + + + D LT LPN R + Sbjct: 370 RTGDE--LEDISASVNQLA---LAVHDRESQLQQARKEQEYLSDHDALTGLPNRRHFSKR 424 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 E A + L +D + ++ G + + + L+ + L + Sbjct: 425 LEHALDSTRENRAQFAVMFLDLDQFKLVNDTLGHHIGDELLVQVANRLVQQPGSGQTLAR 484 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 + G E +++ G +L+ +V ++ +D+ F + E Sbjct: 485 IGGDEFNILIEGVGDIQQLKEIVGQYLAQFHEPFLCAGLEIDISASIGVATFPRDGEDSV 544 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ-GDLLLYAQPI 511 L+ +S + ++ K+ + ++ A++ LY QP Sbjct: 545 SLIKHADLAMYKSKDKGRN-NYSFYSDDLAEYAQKRADMTAALKLAIEAGDQFELYYQPK 603 Query: 512 ---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + + ++ + G++ P +F+ L + L L VL+ L+ Sbjct: 604 TSVLTHKIDAVEALIRWRSPNFGMVPPGQFIALAEETGLIVPIGLWVLKQGLRDFLELQR 663 Query: 569 DKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + S+N+ + L + + ++P + LEITE + ++ + Sbjct: 664 EGIQLEHISLNVSNVQLRNDETVAALKDVIAASGVAPDHIELEITESYIADDVNHAIGVL 723 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + G +AIDDFGTGY++ LK+L IKID FV + + + S+ LA Sbjct: 724 QSFRDMGVGLAIDDFGTGYSSMSYLKKLPVTRIKIDKSFVDGLPGSEDSITLTNSVIALA 783 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 K L++ AE VE + Q L + +QGY +P P + Sbjct: 784 KNFGLAITAEGVELESQLVFLEQQCCDQIQGYYFSKPLPFNE 825 >UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=14 Tax=Rhizobium/Agrobacterium group RepID=B5ZWQ7_RHILW Length = 794 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 121/740 (16%), Positives = 245/740 (33%), Gaps = 68/740 (9%) Query: 49 LCVMLSILFIFGWR---------GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLC 99 L ++ + ++ + F T +W H + ++ + Sbjct: 25 LVGAMAAMLLYSRAQECDAGQRKLWIGASGFAFGTGVWATHFIAMLAYDGGTPISYALDL 84 Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRL--FWLGLVTPIGIKCSMY------------LVGS 145 +G W L + R G + +GI L S Sbjct: 85 TLLSFFLSVGGSWVAILAASQREARFSSTRGGALMALGIASMHLTGMQAIETQAVILYDS 144 Query: 146 FFDFPLKISTFF---GDADAIFTVVDLLSLFTAVLIYNM-------LFYYLTRMIVSPHF 195 ++ F + + L +A L++ + + ++ P Sbjct: 145 AMTLTAVVAGMLLSSAAFHLFFNLKGMRRLLSASLVFVLAICTLHFMSMGSITLVPDPGK 204 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 A D A T L AL+V+ + + + + Sbjct: 205 AVPTLVLDTRVLAAIVVVAATALILVALAVVFVQSHLTDLRGLANASQEGLLILREGRII 264 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFL----------------QGVETEYSLAFILAVLI 299 W ++ L + E ++ + ++ Sbjct: 265 DVNERFQALSGWKLADLSGKAPSDVLTAIQAPRENRPGETLLNTRTGREIAVDVNSSRIV 324 Query: 300 SFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------- 351 C + VR + A D LT LPN + Q + Sbjct: 325 YRGRDCEVLAVRDLTERKQAEEMIEHLAHHDVLTDLPNRSLFDTRIRQALQVAERKNTEV 384 Query: 352 -FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 CL +D + ++ +G +R + L + E++ + +L G E ++ S + Sbjct: 385 ALFCLDLDRFKAVNDIFGHAEGDRILRKVAAILRRVAGESDTIARLGGDEFAIIQSDGQQ 444 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 Q + + + ++ +G + + T + L + Sbjct: 445 PASAQKLAADIIDEFAAEMDTARDPTAVGVSLGIALYPRDGSTAEELCNNADTALYRVKH 504 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILA 524 A + + + + + +R A+ + L + QPI N + GY+ ++ Sbjct: 505 DGRGRA-CFFDAEMDEAARNRRQIESDLRHAIIRNQLHVSYQPILNAQSVEISGYEALMR 563 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G+ PD F+P+ + + +L+ + A P +VN+ P+ Sbjct: 564 WHRPGHGLTEPDIFIPVAEESGSIVQLGEWILQQACREAARWPQ---PLTIAVNVSPVQF 620 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + N+ R+ + ++P + LEITE + + M +++L K G I +DDFGT Sbjct: 621 MLPNLCERVEAVLDETGLAPDRLELEITEAALIRDRDRVMATLQRLRKLGVHIVMDDFGT 680 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+ D IK+D F + + IVR+I L + + VV E VET+ Q Sbjct: 681 GYSSLSNLRSFPFDKIKVDRSFTGVLEHDAAARSIVRAIIGLGHSLGMPVVTEGVETEMQ 740 Query: 705 QALLHKLGVQYLQGYLIGRP 724 + ++ + G +QG L+G+P Sbjct: 741 RRIVVEEGCAQVQGLLLGKP 760 >UniRef50_Q31DJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DJ5_THICR Length = 963 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 84/460 (18%), Positives = 175/460 (38%), Gaps = 19/460 (4%) Query: 284 GVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 T Y + + + + ++ + + + + D LT LPN Sbjct: 491 KDGTMYPEWLTINAVKDKQGRLLHYVGLMNDLSQQKATEQEITRLSFYDILTGLPNISLF 550 Query: 341 EQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + +Q + + I + ++ G ++ + + L L+ + Sbjct: 551 KNRLQQSIQMSVHEANQVALLIVDIARFKMINDAIGYEHGDQLLKGVAQRLTQLLDAEDS 610 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L L+++ + + + H + S + + + Sbjct: 611 VARLGADNFLILMESFQNKQDVSHFAEEIMNAFSLPFEVEGHEHVLDIKIGVALSSIDGD 670 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 T L+ ++ H ++ T++ +R A+D +L+ Y Q Sbjct: 671 TALDLMKSADEALFEAKKLPH-SGYVYHSSELAATTSEYFFYEKALRQAIDNQELVAYYQ 729 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + ++ + + G+++P KF+ + L ++L + Sbjct: 730 PQIVLETNQVVGAEALVRWIHPEMGVISPAKFIGIAESTGLIIPLGREILLQACQQWLAW 789 Query: 567 PCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R SVN+ + L+ + ++ + + P+ + LE+TE N + + Sbjct: 790 QQQGLTLERISVNVSTVQLMHSGFVQSVAQVLEETGLDPKHLELEVTESFLLQNEQEGIA 849 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L G +++DDFGTG+++ LK+L D +KID F++ + + D IV +I Sbjct: 850 VLHALKALGLSLSMDDFGTGFSSLSYLKKLPLDQLKIDQSFIRSLPHDKEDLAIVDAIIA 909 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + A + V+AE VET+ Q LHK G Q QGY RP Sbjct: 910 VGLAVGVEVIAEGVETEAQMEYLHKKGCQLGQGYGFSRPI 949 >UniRef50_B3PF41 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF41_CELJU Length = 805 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 130/729 (17%), Positives = 244/729 (33%), Gaps = 66/729 (9%) Query: 50 CVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLG 109 C++L ++F+ G R + ++ G + + L T L + ++ + Sbjct: 76 CLLLGLIFL-GARPWLILIRGHWRNQVSERSLRRAVTHAGLLGFLWGIVPLICAIHSNAA 134 Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 + + + P LVG + L + D ++ Sbjct: 135 NTLIISVVCVGMLCAGGFALATVPKAAILFCLLVGIGSELSLLFNPLLQRWDLALLLLVY 194 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL--- 226 S A +I + R++ AQ + + + L L A L Sbjct: 195 CSTVIAAVI-TSARTFGARLMAEAEAAQQQQLVSLLLHDFETHASDWLWELDANGQLRDP 253 Query: 227 ---LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 L L + +F + G+G L + + +Q Sbjct: 254 SPRLASLLGRSLEELHEIPFTTLFQMHPEDGLG--GEALSLLRERLRQGQAFRHLVVPVQ 311 Query: 284 GVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 L+ L+ + +R + A D LT L N Sbjct: 312 AHNKACWWQLSAKPLLDRRGHLIGWRGVGSDVTEQRNAHREMNRLANFDALTGLANRYQF 371 Query: 341 EQAPEQEAGKSFCCLRI---D-----------NLEFMSRHYGLMMRVHCIRSICRTLLPL 386 +Q + D N + ++ G + ++++ + L Sbjct: 372 NNRLQQAKTS------LRAEDKLFALLFLDLDNFKTVNDSLGHGVGDKVLQAVAKRLQKA 425 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 +++++ L +L G E L+ G + + + L + L +G Sbjct: 426 IRKDDLLARLGGDEFALISWGEDAVSQAGQIAQRLLRCFHEPCQIDGLNLQIGCSIGIVL 485 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD--- 500 + + + LL + + E + +++ LLN +R AL+ Sbjct: 486 APEHADQPETLLKNADMALYAAKSAGRN-TFQFYERGMGDSAQRRLNLLNDMRRALESVP 544 Query: 501 ---------------QG-----DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 Q + L+ QP + G++ + + G + P + Sbjct: 545 CIKPLCTYVDPHFRWQDQPLLPEFELHYQPQISLADGRITGFEVLTRWHHPERGTIPPVE 604 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+PL + N+ + VL + + P G R +VN+ ++ + R Sbjct: 605 FIPLAEESNMIIPLGIWVLVEACRTASHWPA---GWRLAVNISASQFSHGSLVPVVKRAL 661 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + ++P + LEITE +A S+ + +L G R+A+DDFGTGY + L+ Sbjct: 662 QLSGLAPTRLELEITESLLIQDAHSTRQILGELRTLGVRVALDDFGTGYCSLAYLRSFPL 721 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV + + IV I LA A L VAE +E+ Q+ A+L G + Q Sbjct: 722 DQLKIDRSFVTALQQDASARAIVSGIIQLANALDLETVAEGIESPQEAAMLRDTGCRLGQ 781 Query: 718 GYLIGRPQP 726 GYL P P Sbjct: 782 GYLYAAPVP 790 >UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Sphingomonas RepID=A5VDE7_SPHWW Length = 887 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 119/723 (16%), Positives = 234/723 (32%), Gaps = 40/723 (5%) Query: 30 FISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVM 89 ++ + + ++ PL ML + + Sbjct: 71 WLLGRPALGGAGFWMIAAPLLAMLV--------AGGAIRLVARRGKGATAPERMHGFVAL 122 Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT-PIGIKCSMYLVGSFFD 148 LG + R+ L + L LV P+ + Sbjct: 123 LGLVQGFGWSVWLLASATGLAPSRWALAAVAHGGLLVVTTLVFAPVPTAALALWLCLAIA 182 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVL--IYNMLFYYLTRMIVSPHFAQILWRRDIA- 205 + + + A + + + + + Y +L R V+ + +L + + Sbjct: 183 ATVALGPWAVLALLVPLLAVAVVMLGGISERSYVASRRWLARAAVALKASLLLGEFEESG 242 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 E L + + L + ++ G G Sbjct: 243 RGWFWETDDRGLISYISPQIAAALGLAADRLLGTPMTGL----VLHEAGDGAGSGAGERT 298 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRW 322 L + + L Sbjct: 299 LGFHLATRLAFSEIAVRAAGDDVRWWSLSGRPAFDEYGNFLGFRGSGTDLTEMRRSEAEV 358 Query: 323 HLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT LPN + + ++ + L +D + ++ G + Sbjct: 359 KRLASYDSLTGLPNRILMRRTLDESLRDIAGRPKRAALFMLDLDRFKMVNDTLGHPVGDA 418 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNT 431 +R + L ++Q++ ++ +L G E +VL G RL + + + S+ + Sbjct: 419 LLRQVAVRLQRVVQQDGQVGRLGGDEFNVVLPGIVERNRLATLASAIIQQLSQPYLIDGA 478 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + +G + T L+ + A + E + + LL Sbjct: 479 HVSIGASIGIAIAPDDGATADALVRNADLALYAAKADGKGV-HRFYEPEMHASAKDRRLL 537 Query: 492 LNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +R + + L L QP+ + ++ ++ G ++P F+P+ + L Sbjct: 538 EMDLRGVMSESGLHLVYQPVVDAGSEAIVCFEALVRWDHPTRGAVSPSDFIPVAEEIGLI 597 Query: 549 ARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 + VL + A P R +VN+ P+ ++ G ++ + P + Sbjct: 598 PQIGEWVLRTACLEAANWPD---PVRVAVNISPIQFANPSLPGIVLSALAAAQLPPHRLE 654 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE ++ ++ +L G R A+DDFGTGY++ LK+ + IKID FV+ Sbjct: 655 LEITEGVFLNDDAATDAMFARLKAIGVRFALDDFGTGYSSLGYLKKAPFNKIKIDQSFVR 714 Query: 669 D--IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + N A I+R+I LA++ + AE ET + AL+ LG ++QGY+ GRP Sbjct: 715 GAAVPGNRN-AAIIRAIVALAESLEMETTAEGAETPDELALIRSLGCSHIQGYIFGRPML 773 Query: 727 LAD 729 + Sbjct: 774 SDE 776 >UniRef50_Q3SL48 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SL48_THIDA Length = 674 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 97/550 (17%), Positives = 203/550 (36%), Gaps = 19/550 (3%) Query: 195 FAQILWRRDIAPSLGKEKRAFTL-SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 F + P +E+ L A + + + V + Sbjct: 109 FVAARLQLLELPLSARERHLIDLHKERIAFAQPIQEEVIELISADFTQDGVDLALRQAIP 168 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYH 313 + L V + + + + + + F L+ + ++ +++ Sbjct: 169 AQNSVMVLLSRLDEEVHRVAIAASERAYEAHRVARFWMYF-LSGIALLVGLVVAAAVLFY 227 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSR 365 + + R D LT LPN L EQ ++ + +D + ++ Sbjct: 228 SARFSRER-ERLVTKDTLTGLPNRMLLRDRLEQALARARRRGTLVGVMFIDLDRFKRVND 286 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---N 422 G I + + L + ++ + + +L G E ++V + G++ H+V + Sbjct: 287 TLGHASGDELICEVGQRLRAIARDEDTVARLGGDEFVVVANDARGVGQILHIVEKVRAAL 346 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + L F + LL + + ++ Sbjct: 347 AAPYRVGERELFCCSSIGISVFPNDGADCSSLLKNADTAMYHAKGSGRDR-FQLYDAGMN 405 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 +++ L + AL++G+ +L+ QP + + ++ G++ P FL Sbjct: 406 AMAEERLQLETDLHYALERGEFVLHYQPQIDLTSGRVCAVEALVRWNHPQKGVLAPASFL 465 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 ++ + +L + + A K +VNL ++ I K Sbjct: 466 EMLEETGQILDVGRALLLAACQQTAQWHAAGFKDLDVAVNLSGKEFWHGSLISSISEALK 525 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + Q + +E+TE + ++++ I+ L G +A+DDFGTGY++ LKR + Sbjct: 526 LSGLPAQFLQIELTESIFMKDIDNAVARIQALKALGVAVAVDDFGTGYSSLAHLKRFPVN 585 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 ++KID F+ ++ T +++ +V SI L+ L VAE VE +Q A L +LG + +QG Sbjct: 586 VLKIDRYFINELPTASVNEALVASILALSDGLHLDAVAEGVENIEQLARLRQLGCRIVQG 645 Query: 719 YLIGRPQPLA 728 YL+ +P Sbjct: 646 YLVSKPVAAE 655 >UniRef50_C9RXJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C9RXJ9_GEOSY Length = 947 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 93/464 (20%), Positives = 184/464 (39%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR---- 338 G + + I ++ V + + R + + A D T LPN Sbjct: 476 SGERLLFQMKNIPIIVDGKKVGIYGIGRNITEQKKAEEKISYLAYYDIDTNLPNRTKWME 535 Query: 339 ----ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 L++A ++ + + +D ++++ G +R + + ++ + +L Sbjct: 536 LFSEQLDKAKQKRRKMAVALIDLDRFKWINDSVGHYAGDDILRQLVERIRRVLPPSAELG 595 Query: 395 QLPGSELLLVLS----GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 + G + L+ +V + +R I + + F + E Sbjct: 596 RFHGDKFCLLFPLKTEAQAATEAALRIVREV-ARPIVYEGKEFFVTASVGLAMFPDDGED 654 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 LL + + ++ + ++ + +R A+++ +L L QP Sbjct: 655 EHALLRHADMAVNMAKKGGGNRV-ERYCAQMNEEAMHRLEMGGHLRRAIEENELFLCYQP 713 Query: 511 IRNKEGEGY---DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 I + + ++ G++ PD+F+PL + L VL++ + Sbjct: 714 IVDVHTGAVKATEALIRWRHPKLGLVRPDEFIPLAEETGLIHEIGRWVLKTACRQTKQWQ 773 Query: 568 CDKKGPRFS--VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R + VN+ P+ + + + K+ +SP + LE+TE S+M Sbjct: 774 EITGNNRLAIFVNVSPVQFQHERFVDNVKQALKQSRLSPSCLHLELTEHSMLRYLSSTMR 833 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +++L K G IA+DDFG+GY+++ LKRL A I+KID F++ + N D IV+++ Sbjct: 834 TMDELRKLGVGIAVDDFGSGYSSFHYLKRLPATILKIDRAFIEQLHANASDEAIVKAMIT 893 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L +AE VET +Q L L Y QGY+ P + Sbjct: 894 MGHGLGLETIAEGVETPEQLNRLRDLQCTYAQGYVFCPPLLAEE 937 >UniRef50_Q1NX96 GGDEF:EAL:Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NX96_9DELT Length = 654 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 116/560 (20%), Positives = 196/560 (35%), Gaps = 43/560 (7%) Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN 264 LG F + +A L+ L + + +P + T+ + P Sbjct: 93 RSLLGSGSGRFVVGQVATLAEARQYLEDHRPDVLVLDIGLPDSHGLDTVKSIRQAAPATP 152 Query: 265 LT-------WAVSTLCLLNYNQNFLQGVET-EYSLAFILAVLISFSVCLLYMVRIYHRSE 316 + + L Q++L YSL+ L ++ S + + R E Sbjct: 153 IVVLTGHGDQDFALATLEAGAQDYLDKNALNSYSLSRALRYAVTRSRLENRLHESHQRLE 212 Query: 317 WLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYG 368 L +DPLT LPN R L Q + + + + ++ G Sbjct: 213 ELLDEVKSLNTSDPLTGLPNRRNLLEQLERSIAQHLRAKQHGALLGIDLGGFRVVNDTMG 272 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS---------GPETEGRLQHMVN 419 + R L ++E + + +L E +VL E + + Sbjct: 273 HDAGDLLLIEASRRLRLYVRETDVVARLGSDEFAVVLEYLNDNLNQAAIRAEEVARKLRQ 332 Query: 420 ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 +N R N + F E LL + + Q+ L + +E Sbjct: 333 AIN-RPFVINGRECHVNISIGICLFGRRDELYDELLIRANVATYQAKKTGRNL-IRFFDE 390 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYA--------QPIRNKEGEGYDEILARLKYDGG 531 + + +R A+ + LLLY QP G + ++ + G Sbjct: 391 TMQTALEARAAQEAELRRAIKEEQLLLYYQPLLNAAGQP------VGAEALIRWQHPEKG 444 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNI 589 ++ P F+PL + L VL L ++N+ Q + Sbjct: 445 LIPPGDFIPLAEETGLIVDLGRLVLRQACAQLLQWRQQPELAQLTLAINISAHQFRQTDF 504 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +I + I P + LE+TE N + +++L G IA+DDFGTGY++ Sbjct: 505 VDQIEQTLTACSIDPHRLKLELTESALLENRGDARAKMDELLAMGLNIALDDFGTGYSSL 564 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK L +KID F+ ++ ++ D IVR+I +A L VVAE VE Q L Sbjct: 565 AYLKNLPVYQLKIDRSFIANLGSDASDTAIVRAILAMAAELGLEVVAEGVEELTQLDFLR 624 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G QG+ RP P + Sbjct: 625 EHGCSRFQGFYFSRPLPPDE 644 >UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P569_9PROT Length = 751 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 123/732 (16%), Positives = 238/732 (32%), Gaps = 48/732 (6%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 L+ I+ F+ W M I FG+ G+ VL + + Sbjct: 25 LNSVFLLAGIVAFGMGFIRWQTSVAMGEID--FGFAGLCFVLLAYLRRHRSQADMFASIV 82 Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL---FWLGLVTPIGIKCSMYLV 143 V+ + + + +L + + ++ R+ WL + Sbjct: 83 LVLCYGLFLSIYISASYNTMRLSLFFLLAAAAFFLKGRIAGRIWLAFI------------ 130 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 + + +F + + A+ I + + Q L R Sbjct: 131 -LLTIVIVHVLPYFETGYSHIDIFTTCLYLLALFIIFENYETFKESQHTSEEEQALLRLT 189 Query: 204 IAPSLGKEKRAFTLSW-------LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + W S + E + + +F II Sbjct: 190 EERWRHALEGTGDAVWDWRPETGEFHYSRRFSEMLGYAEGEL-GKHAEHIFNIIHPDDEP 248 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA----FILAVLISFSVCLLYMVRIY 312 ++R + + + + ++ Sbjct: 249 RVRDELHDFIQ--RRAGNYVSEMRLSARDGSWKWMLCRGKVAQRDDEHSAGLMVGTFSDI 306 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMS 364 + R+ A D LT +PN L +Q + C L +D + ++ Sbjct: 307 TLLKQHERQLEHIAHYDALTGIPNRVLLADRLQQALAHSKREGTILAVCYLDLDGFKLVN 366 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 G + + + + ++ ++ + +L G E ++L G +N L Sbjct: 367 DTMGHEAGDKVLIEVTQRIKKSIRGDDTVARLGGDEFAVLLLGLHAPEECSASLNRLLEE 426 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 S+ I N ++ + G+ LL + + Sbjct: 427 ISQPIEIKNRLFEVSASIGVSIYPGDDHDADTLLRHADQAMYTAKQSGKNRYY-LYDTEN 485 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKF 538 + L + AL + + LY QP + G + ++ + G++ P F Sbjct: 486 DQRARSHHEFLRRLALALGRNEFELYYQPKVDMRTLQLVGAEALIRWHHPERGLLAPGDF 545 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR-LF 597 L I L V+ + L L S+N+ L + A ++ R + Sbjct: 546 LHAIEGTTLEVELGDWVVATALAQLEAWHEAGLPMELSINISVRHLQANDFAWKLKRKML 605 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + H+ + +E+ E A + IE+ K G A+DDFGTGY++ L RL Sbjct: 606 RYSHLPKGCLQVEVLETAALEDIPRVSDTIERCRKIGISFALDDFGTGYSSLSYLGRLPV 665 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID F++D++ + D IV+ + LAK + +VAE VE+++ L ++G +Y Q Sbjct: 666 DALKIDQSFIRDMLKDKGDRAIVQGVIALAKVFNRKIVAEGVESEELFRDLVEMGCEYGQ 725 Query: 718 GYLIGRPQPLAD 729 GY I RP P ++ Sbjct: 726 GYGIARPMPASE 737 >UniRef50_Q47VW2 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47VW2_COLP3 Length = 831 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 90/441 (20%), Positives = 178/441 (40%), Gaps = 18/441 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLR 356 L + + + A D LT LPN + L Sbjct: 377 LALEDEITHRKQAEKLLKHTAAHDSLTGLPNRMVFLDLLNHAIACAKRKDDFSFAVLFLD 436 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G ++ I R LL ++++ + + +L G E ++++ ++ Sbjct: 437 LDRFKVVNDSLGHHAGDVLLKIIARELLAIVRKVDTVARLGGDEFVILIEDLKSNNEAFE 496 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + +N + G + +L + + Sbjct: 497 VAQRITAFLQQPFTIDNQLVYTGTSIGISFSNIRYTDADTMLRDADTAMYHAKDNGRGR- 555 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + ++ + + + L IR A+ + + Y QPI N++ +G++ + Sbjct: 556 YEVFDDSMHQKVQNALSLEADIREAITWQEFIPYFQPIIKLDNQKLKGFEALARWQSTKR 615 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSVNLMPLTLLQKN 588 G + P+ F+PL + +L D+Q++E + L + S NL + Sbjct: 616 GFVYPNDFIPLAEETDLIKEIDIQIIEKSCQQLKCWHDELGCDDLYVSCNLFSKQFFSTS 675 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I ++ KR ++P + +E+TE NAE + N++ L G +I +DDFGTGY++ Sbjct: 676 LPQDIEKVLKRTGLAPHHLRVELTERALLENAEIVLTNMQALKNMGVKILLDDFGTGYSS 735 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L R D++KID F+ ++ + + I+R+I DLA +S V E +E+ LL Sbjct: 736 LGYLHRFPIDVLKIDRSFISNVDEHNNNRAIIRTIVDLANNLQMSTVGEGIESLADAELL 795 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 ++ Y QGY +P D Sbjct: 796 QQMDCVYGQGYYFAKPMSSQD 816 >UniRef50_C3MGT7 Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain n=1 Tax=Rhizobium sp. NGR234 RepID=C3MGT7_RHISN Length = 928 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 92/439 (20%), Positives = 176/439 (40%), Gaps = 17/439 (3%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 + + A D LT LPN ++E + Sbjct: 483 DGGWVSTYEDITERLDSEEQISFLARHDSLTGLPNRLQFNSHLDEELDAAVWFSRKVAVI 542 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV--LSGPETE 411 + +D + ++ +G + +I + + +QE E + + G E V Sbjct: 543 GIDLDKFKEVNDLHGHAAGDFVLVTIAQRMKEHLQEGEFVARFGGDEFAAVKRFEDLSEV 602 Query: 412 GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + ++ + + L G + + ET L+ ++ A Sbjct: 603 HDFLRRIETCLQEEMRFGDFELKSGGSMGVAIYPQDAETADTLINNADLAMYRAKAAL-N 661 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + E + + L N + A+++ +L L+ Q ++ + GY+ +L Sbjct: 662 QTICFYEVSMDEAARGRRALANDLWEAVERSELALHYQVQKSVTTGDVIGYEVLLRWNHP 721 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 + G++ P++F+PL + VL + A+ + + +VNL P+ L + Sbjct: 722 ERGLVPPNEFIPLAEECGAILPIGEWVLRQACREAASWDAEY---KIAVNLSPVQLANGD 778 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + + + LEITE + E ++ + + G IAIDDFGTGY++ Sbjct: 779 VVSLVHSILVETGLDAKRLELEITESTIIDDKERALLTLRAIKALGVTIAIDDFGTGYSS 838 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 E L+ D IK+D F+ ++ + I+R+I L + + V+AE VETQ+Q +L Sbjct: 839 LETLRAFPFDKIKLDKSFMSEVEGSPQAKAIIRAILALGHSLQVPVLAEGVETQKQLDIL 898 Query: 709 HKLGVQYLQGYLIGRPQPL 727 G QGYL+GRP P+ Sbjct: 899 QAEGCDEAQGYLLGRPAPI 917 >UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE71_9SPHN Length = 749 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 121/712 (16%), Positives = 234/712 (32%), Gaps = 52/712 (7%) Query: 63 GVVPVLCGMFCTNLWNFH--------LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY 114 V + + + F+ A + ++ ++ Sbjct: 30 AVAGITISAAFASATMYSSGHHLEVIAWFVAVAAIGLARVLLLRPGLRGTGEISAIAKCK 89 Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 L + + W + + + + + Sbjct: 90 SLVILALANGVVWGLGGFAAATVATPGQFFMISILLSGMMGASAMSYGAIAMPVPAFVVP 149 Query: 175 AVLIYNML-FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS----WLAALSVLLLL 229 A L + + + + + A I + + +R+F A S + Sbjct: 150 AGLGFLAVWVAFPDAPLATGSIATIAYVAVLIRGAFSNERSFIAKLRAEERATDSAETVR 209 Query: 230 LCTPYENDFIAGYLVPV---FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L + + +L + I+ L + L + + +E Sbjct: 210 LLMNDFTEQASDWLWEIDGGLRIVNPSDRFIHVAGREGLQLSGKAFLDLFDETSERRQLE 269 Query: 287 TEYS-------------------LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 +E + A + + R + A Sbjct: 270 SELRNRRVFRKLTLPLTISGKRRWWALSARPCEANGGFRGVASDVTAQREAEARINHMAH 329 Query: 328 TDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT L N + + L +D + ++ G + +R + Sbjct: 330 YDALTNLANRYLFNASLDHALNRLLDRHRICVLYLDLDQFKGINDTLGHAVGDALLREVG 389 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 + L + + +L G E ++L + + + + + + +G Sbjct: 390 KRLENTLNGRGLVARLGGDEFAVLLQDENLDHVAMTIAHRIMENLRDPYVIEGSEICIGT 449 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 D + L+ ++ + E + + L +RT Sbjct: 450 SIGVAFADPQGPSASDLMKHADLALYRAKELGRGKVV-VFESALVEFALARRELEMDLRT 508 Query: 498 ALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL GDL L+ QP+ + + GY+ ++ + G++ PD+F+PL Q L Sbjct: 509 ALTDGDLRLHFQPLMDLQTNKILGYEALVRWHHPERGLILPDEFIPLAEQTGLIVELGEW 568 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 V+ P + S+NL P L + ++ I+P + LEITE Sbjct: 569 VIREAAATARLLPGE---LTISINLSPAQLRSSQLLATVVSAVAHAGIAPSRLELEITEG 625 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 ++E M + +L FG RIA+DDFGTGY+++ L+R + IKID FV ++ + Sbjct: 626 VFLEDSEDCMRILRELRTFGVRIALDDFGTGYSSFGYLRRFPFNTIKIDRSFVAELRESD 685 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 IVR+I+DLA +SV AE +E Q ++L LG + QG+L+G+P P Sbjct: 686 DCRRIVRAISDLAHGMGMSVTAEGIEDVSQLSMLRDLGCEVGQGFLLGKPMP 737 >UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinococcus radiodurans RepID=Q9RX49_DEIRA Length = 805 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 96/504 (19%), Positives = 171/504 (33%), Gaps = 57/504 (11%) Query: 278 NQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNR-------------- 320 + L+ L + L Sbjct: 275 EERMLRPDGEPVYQLRNYTPLFDENGELLLYLGHGVDVTELRRTQEALRELNAQLEERVE 334 Query: 321 -----------RWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNL 360 + AL D LT LPN Q + L +D Sbjct: 335 ARTAELEALSRQLQHDALHDSLTGLPNRALFSDRLSQAIARSKLPGGPQYAVLFLDVDRF 394 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + R L ++ + + +L G E ++L ++ + + Sbjct: 395 KGINDTLGHPTGDAMLVEMARRLRACLRATDTVARLGGDEFTILLEPLQSTEQAAQVAAR 454 Query: 421 L---NSRQIHWNN----------TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + R + + M + ++ +L ++ Sbjct: 455 IQDALRRPMQMPAAGPGGLPGGWHQVTMSASLGIVHSQPDYDSAMAVLRDADIAMYRAKD 514 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + + +R AL +L + QP+ + EG++ ++ Sbjct: 515 GGRAK-YRVFTPEMREHILHVNRMEHELRRALAADELRVRYQPVLDLDRGRIEGFEALVR 573 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMP 581 + G++ PD F P+ + L D VL + L SVN Sbjct: 574 WQHPERGLLGPDDFTPIAEESGLLPDIDRWVLARACRELVQWQRLYPHDPPLHLSVNFCS 633 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L ++ R+ L +R P + LEITE S N+E+L + G R+ +DD Sbjct: 634 QHLAAPDVHERVKELLQRTGFDPGRLNLEITESSLLSQTGDVQRNMERLRQLGVRLHLDD 693 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+ D++KID FV+ ++ N +A +VR+I +AK +L VVAE +E Sbjct: 694 FGTGYSSLSYLQLYPIDVLKIDRSFVQGMLDNDSNAELVRTIVAMAKNLNLKVVAEGIED 753 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQ 725 +Q A L LG QG+L Sbjct: 754 PRQLAALRGLGCDAGQGFLFSPAL 777 >UniRef50_B2JAQ1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2JAQ1_NOSP7 Length = 720 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 91/434 (20%), Positives = 175/434 (40%), Gaps = 18/434 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEF 362 + + + D LT LPN Q EQ G + L +D Sbjct: 268 IDKRQQAEAQLLHVVFHDSLTGLPNRTLFIQRLEQGIERVKKQPSVGLALLYLDLDRFGV 327 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + R L ++ + +L E ++L + + +L Sbjct: 328 VNNSLGYTSGDQLLIAFARRLEICVRSQDIFARLEADEFGILLEDIQALSDVIGFAQLLQ 387 Query: 423 SR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + + + E Q L+G + ++ + + + Sbjct: 388 EKLKMPFYLGSQEVFISASIGIASTTVGYEQAQILVGNANIAMHRAKSLGKA-SYKVFDT 446 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPD 536 + +T K + L + + A++ + L QPI + G++ ++ G++ P Sbjct: 447 PMFMETNKLLQLESDLERAVENQEFRLAYQPIVSLSTNNLIGFEALIRWQHPRRGLVFPG 506 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLLQKNIAGRII 594 +F+ + + + VL + L SVN+ L Q N+ I Sbjct: 507 EFISVAEETGMIVDISYWVLREACRQLYVWQQKFLNDQLAISVNISSKQLSQSNLNQEIR 566 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++ + ++ + + LE+TE N++S++ + QL + G ++ +DDFGTGY++ L Sbjct: 567 QILEETNLDARNLKLELTETTIVENSQSTIEKLWQLKEMGVQLHVDDFGTGYSSLSYLHH 626 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 ++KID F+ I TN+ +A IV +I LA + V AE +ET +Q LL KL + Sbjct: 627 FPISVLKIDRSFINRIDTNSKNAEIVSTIITLAHNLGIDVTAEGIETLEQLELLQKLQCK 686 Query: 715 YLQGYLIGRPQPLA 728 Y QGYL +P + Sbjct: 687 YGQGYLFSKPVKAS 700 >UniRef50_A6X3N7 Diguanylate cyclase/phosphodiesterase n=9 Tax=Proteobacteria RepID=A6X3N7_OCHA4 Length = 658 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 119/557 (21%), Positives = 213/557 (38%), Gaps = 38/557 (6%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 L D+ +L + + L+ L P + V I Sbjct: 98 QRRRDLFLKLSDVLQALDVQLDKLDADEVKTHLQLMSALDGPMTALASSAVEYDVGLIDA 157 Query: 252 TLGVGKLRYPFLNLTWAVSTLC-------LLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + + A LC LL +N+ + + L L Sbjct: 158 AQAEVRQLHLIYTGLAAGLILCGVVLVILLLRHNKLLDRAHGSMQRLTSDLRQATG---- 213 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLR 356 + N R A D LT LPN Q E+ + L Sbjct: 214 ---------ELQSQNFRLEHDAHHDALTGLPNRVLFRQDLEKRLEAAQTGSQSAIILLLD 264 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + ++++ R L L + + + +L G E ++ +G E L+ Sbjct: 265 LDGFKDVNDTLGHDVGDALLQAVARRLTKLGERGDMVCRLGGDEFAVLSTGLREEEALEL 324 Query: 417 MVNI--LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + S+ H + +G +G +T + L ++ A A Sbjct: 325 ADRLMDVISQPYHVGELEIKIGTCVGVAISEGEPDT-EELFKHADLALYEAKALGPGHA- 382 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGG 531 + + + ++ ++ AL+ G++ +Y QP +E GY+ +L G Sbjct: 383 SVFKSQMQTRLREKKSFEADLQKALENGEMEVYYQPQACTITREICGYEALLRWTHPIRG 442 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 ++P +F+P+ + VL++ A K + +VNL P+ N+ Sbjct: 443 AVSPVEFIPVAEKIGFIHALGDWVLKTACLEAAHWN---KPLKIAVNLSPVQFRSLNLIQ 499 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 +I ++ + + LEITE E ++ + QL G +IA+DDFGTGY++ Sbjct: 500 SVIDALEQSGLEANRLELEITESVLLDKNEQTLSTLRQLKALGIQIAMDDFGTGYSSLGS 559 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L D IKID FV+D+ T IV +T + ++ + +AE +ET++Q L +L Sbjct: 560 LSGFPFDKIKIDRSFVRDVTTRPDALAIVELVTGVGRSLRMVTIAEGIETEEQFECLKRL 619 Query: 712 GVQYLQGYLIGRPQPLA 728 G +QGYLIGRP P + Sbjct: 620 GCDQVQGYLIGRPMPAS 636 >UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15V87_PSEA6 Length = 1524 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 93/439 (21%), Positives = 178/439 (40%), Gaps = 16/439 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLR 356 L ++ + + A D LT LPN L + + Sbjct: 1077 YLIILSDISEHKKAQQALIKLANFDALTGLPNRALLLDRVDHAIYQAQRSASTLGLFFID 1136 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G ++ I LL L+++ + + +L G E ++++ T L H Sbjct: 1137 LDKFKQVNDSLGHNAGDTLLQEISARLLNLLRKEDTIARLGGDEFVVLIENVHTIDDLTH 1196 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + N + + + + + Q LL + + Sbjct: 1197 LASQIIEIIDTPVQLENHLVSVSSSIGIALYPDDAQDAQELLQNADIAMYHAKENGRSH- 1255 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 ++ +++ L + ++ A L Y QPI + + G++ ++ D Sbjct: 1256 FQFFTAKMNVLAQQRLALESDLKYAHSHQQLENYYQPIIDISRNKIAGFELLMRWF-TDT 1314 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G ++P +F+P+ + L LQ +E L + SVNL Sbjct: 1315 GKVSPGRFIPVAEELGLIESMTLQAMERALPMFKHWQANGFDGYLSVNLSARHFESLQSI 1374 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 +I + + V EITE + + ++ ++ L + GF IA+DDFGTGY++ + Sbjct: 1375 KDVIAFLASNALPVEMVRFEITESALMKDYQKAIIYMKHLREAGFSIALDDFGTGYSSLK 1434 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK +IK+D FV DI N + ++ +I +A++ + VAE +ET++Q A + Sbjct: 1435 YLKEFPLSVIKVDKSFVDDIGINKNNEALIETILRMAQSLDMYCVAEGIETKEQVAFFKE 1494 Query: 711 LGVQYLQGYLIGRPQPLAD 729 Q+LQG+ RP LAD Sbjct: 1495 HDCQFLQGFYFSRPVALAD 1513 >UniRef50_A6X5M4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rhizobiales RepID=A6X5M4_OCHA4 Length = 786 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 87/452 (19%), Positives = 178/452 (39%), Gaps = 17/452 (3%) Query: 285 VETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 E + LA +L + R R+ A D LT LPN E+ Sbjct: 315 DERIFELAVHTIEYQGRPCEVLAV-RDLTEKRTAQRQIEHMARHDTLTDLPNRMFFEERL 373 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + L +D + ++ +G ++++ L + + ++ G Sbjct: 374 ANAVARRSREPFAVLALDLDRFKAVNDIFGHAEGDRVLKTVSSILKRSINGIDTAARIGG 433 Query: 399 SELLLVLSGPETEGRLQHMVNILNS-RQIHWNN--TGLDMGYGAAWGRFDGNQETLQPLL 455 E +++ G + + + + N +G + + + + + Sbjct: 434 DEFIILQVGVPQPKGARKLSEKILDTFRSELNTVLDPTAVGVSIGVAVYPNDGKDAEAIR 493 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 ++ + + + ++ + +R A+ +G + + QP+ Sbjct: 494 HAADIALYRAKTEGRGMV-AFYSPEMDREIRERRQMEADLRHAMVRGQISIAYQPLFATA 552 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + GY+ ++ + G + P+ F+P+ + + VL + A K Sbjct: 553 DGSCTGYEALVRWNHPERGQIPPEVFVPIAEETGVIVPLGEWVLREACRTAAGWE---KH 609 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VNL P+ N+ + + + + P + LE+TE + +++ + ++ K Sbjct: 610 LTIAVNLSPVQFRLINLPDTVSSVLAQTGLDPTRLELEVTEAALMKDRLTTLELLRRMKK 669 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G RI +DDFGTGY++ L+ D IKID F+ + T+ IVR+I L ++ L Sbjct: 670 LGVRIVMDDFGTGYSSLSNLQSFPFDKIKIDRSFITSMETDVSARAIVRAIVGLGRSLDL 729 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 VVAE +ET Q ++ + G + +QG+L GRP Sbjct: 730 PVVAEGIETFDQHRMVIEEGCEQVQGFLFGRP 761 >UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VEL8_DESVV Length = 926 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 106/562 (18%), Positives = 194/562 (34%), Gaps = 42/562 (7%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 RR E R + +A + L+ D + P F + L ++ Sbjct: 356 RRKAFALQESEARFRAIFEHSAAGICLVG------RDGLLMDANPAFEELLGLTRAEVVG 409 Query: 261 PFLNLTWAVSTLCLLNYNQN---------------FLQGVETEY---SLAFILAVLISFS 302 + V L+ FL+ + + + + Sbjct: 410 CRFDAFLPVKAASELDSTCRSSFAEGRDTVSLRLPFLRVDGEQRWGRQIVTAVRDVAGDV 469 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQEA-----GKSFC 353 +L V + R A D LT LPN + + Sbjct: 470 AFVLAQVEDITEQQQTEARLTRMAFHDALTGLPNRVLFLDRVETALRRARRHETYHFAVL 529 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G +R R L P ++E + + + G E ++L Sbjct: 530 FLDLDRFKVVNDSLGHKAGDELLRQFARRLEPCLREVDTMARFGGDEFAILLDDMSDVDE 589 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 +++ L + + + G + + +L ++ Sbjct: 590 SVNIIERLQAALRQPFLVQGMEVYTGASIGAVLRARDYTQAEDILRDADIAMYRAKDSGK 649 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + + N +R ALD ++ LY QPI G + ++ Sbjct: 650 GRFVVFESSA-APGAQDILRRENELRRALDGDEIELYFQPIVALRTGRITGLEALVRWQH 708 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQ 586 + G++ P F+PL + NL D+ V + + ++N+ + + Sbjct: 709 PEQGLLAPGTFIPLAEESNLICDLDMHVFRKGCLAVVALQEAFEGPLAVNINISARSFRR 768 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + I + + PQ V LEITE + E + + +L G + +DDFGTGY Sbjct: 769 LRMVQDITDILRETGCPPQMVKLEITENLLLTGLEVT-DKLWRLKDLGLSLVLDDFGTGY 827 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L++ DI+KID F+ + IV SI +L + L VVAE +E +Q Sbjct: 828 SSLNYLRQFPMDILKIDRSFISRVHEERAARGIVESIANLGRTLGLGVVAEGIEVSEQAE 887 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 +L ++G + QGY RPQP Sbjct: 888 ILLEVGCPHGQGYFYSRPQPFD 909 >UniRef50_Q2G9J7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Sphingomonadales RepID=Q2G9J7_NOVAD Length = 769 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 95/464 (20%), Positives = 188/464 (40%), Gaps = 20/464 (4%) Query: 282 LQGVETEYSLAFILAVLISFS-VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 L G + L+ V + + V + + A D LT LPN L Sbjct: 294 LHGSHRWWELSASPKVDDNGTFVGFRGVGSDVTEQRESAEKIAYLARYDTLTGLPNRLML 353 Query: 341 EQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 +A + +F + +D + ++ G ++ + + + ++++ E Sbjct: 354 TEALGDAMGYSEKWRSNCAFLMIDLDRFKAVNDTLGHLVGDQLLAMVSDRMTRIIKDGEV 413 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 +L G E +V+ R+ + + + S+ ++ L +G + Sbjct: 414 CGRLGGDEFAVVVRDVADSQRIAELADAIIATLSQPYEVDHHMLYVGASVGSAIGPRDGA 473 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 T++ LL ++ + + E + ++ L ++R AL++ + L Q Sbjct: 474 TVETLLRNADLALYRAKDEGGG-SHCTYEPALHAHAEERRKLEFSLRHALERSEFGLVFQ 532 Query: 510 PIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P+ + ++ +L + G ++P KF+PL L VL + Sbjct: 533 PVVDATSEAVVSFEALLRWNSEEHGSVSPAKFIPLAEDTRLIVPIGEWVLRMACQEAMNW 592 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 P + +VN+ LL A ++ + P + +E+TE +A + Sbjct: 593 P---PHVKIAVNVSGEQLLDPYFAETVVGALAASGLPPHRLEIEVTESIFVRDATVAQMT 649 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN-TLDAMIVRSITD 685 +E L G +A+DDFGTGY++ L++++ IK+D FV+ + IVR++ Sbjct: 650 LENLMGIGCGVALDDFGTGYSSLGYLRKMRFSTIKVDRSFVQGAAKDNPESLAIVRAVVA 709 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + +S AE VET+ + + +LG + +QGY GRP AD Sbjct: 710 MADSLDMSTTAEGVETEAELETIRRLGCKKIQGYYFGRPMSAAD 753 >UniRef50_B6R112 Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R112_9RHOB Length = 698 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 88/444 (19%), Positives = 168/444 (37%), Gaps = 19/444 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE-QAPEQ-------EAGK 350 S S +L + A D LT L N LE +A Sbjct: 233 FSGSRAILLSASDVTKRLKAEHEVRYLAHHDTLTGLANRTFLEIEAERYLDETRITGNPG 292 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G ++ + I + L +++ + +L G E +++++ Sbjct: 293 ALIFIDLDRFKTINDTLGHLVGDDLLVVIAKRLKEVVEGIGFVARLGGDEFVVLIANFAD 352 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 L + + S+ L + + + L L+ + ++ Sbjct: 353 YDLLDDISREIRTALSKPCKVRGHMLQVTPSIGVCTYPEHGVDLDTLMRKADLAMYKAKD 412 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + + +S + ++V L +R AL +L ++ QP G + +L Sbjct: 413 LGRDR-ICFFDISMSREAEERVSLETALRQALRNKELAVHYQPRVCVATNRIVGAEGLLR 471 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G+++ F+ + + + V + S+NL P Sbjct: 472 WHHPTRGLVSAASFIEIAEEAGMIDEIGDWVAREAMLQQKQWAQAGHDIAISINLSPAQF 531 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + I+ R+ R+ S +++ LEITE S+A ++ + L GF + IDDFGT Sbjct: 532 RRGRISQRLHRILIETGASARSIRLEITESALLSDANETLKELNALRDLGFTLEIDDFGT 591 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+N L+R +KID F+ D IV+ I + + +L++VAE +ET++Q Sbjct: 592 GYSNLGYLQRYPVTALKIDRSFIADTKRWP----IVQMIVQMGRLLNLTLVAEGIETKEQ 647 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 + KL QGYL Sbjct: 648 LRQIQKLQCHEFQGYLYSPAVAPE 671 >UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase n=11 Tax=Clostridium RepID=A7GAB5_CLOBL Length = 892 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 94/453 (20%), Positives = 193/453 (42%), Gaps = 16/453 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-- 345 E F V ++ ++ + A D LT L N + + + Sbjct: 434 ELRKWFSAVVYSMEVDYFALLLTDITENKKDKEKILGLAYYDSLTGLSNRKKIIETINKT 493 Query: 346 ----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + + +D+ + ++ G + + + + L+ K+ +L G E Sbjct: 494 INSYENEKFAVLFIDLDHFKSINDTLGHDVGDYVLEKVSARFKMLLSPKNKIGRLGGDEF 553 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++V + + + + + I + L +G + + + L+ Sbjct: 554 IIV-QNITSISDAEKLACKICTTLNHSIKYKEDDLFIGASIGISIYPEDGKDTSTLMKNA 612 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--- 515 + + + ++ + ++L N +R AL++ +LL+Y QPI + + Sbjct: 613 DAAMYAAKKNGG-YKYEVYSRSMNERALDDLILENRLRRALEKNELLVYFQPIYHLKTSK 671 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPR 574 + ++ + I++P++F+PL A D VL K Sbjct: 672 IIAMESLVRWKFDNK-IISPNQFIPLAKNIGEIANIDNWVLNKACSQCNLWQKQNNKPLY 730 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN+ + KN ++ + + + P + LEITE++A + + S+ +E L + G Sbjct: 731 VSVNISFKQMKDKNFVDNVLNILRTTKLEPSYLCLEITEDEAMEDVDLSIKTLEALKRHG 790 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +I++DDFGTGY++ + +L D IKID +K+I + IV+SI ++K+ +++ Sbjct: 791 IKISLDDFGTGYSSLSYVTKLPIDNIKIDKSIIKNIHKDNKSLQIVKSIILMSKSLDINI 850 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VAE VET +Q +L +LG ++QG+ I P P+ Sbjct: 851 VAEGVETIEQLEILQELGCDFIQGFYISEPLPI 883 >UniRef50_Q1AWV6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWV6_RUBXD Length = 673 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 96/426 (22%), Positives = 171/426 (40%), Gaps = 16/426 (3%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 + QAL D LT LPN + + + + +DN + ++ G + Sbjct: 213 SEELFRHQALHDHLTGLPNRALFRERLGEILSRSGEAAVLFVDLDNFKVVNDSLGHEVGD 272 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE---TEGRLQHMVNILNSRQIHWNN 430 + + R L ++ + +L G E ++L G E + ++ L Sbjct: 273 RLLVEVSRRLKGCLRATDMAARLGGDEFTVLLDGAGVRCPEEVARRLLREL-GEPFEVEG 331 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 L + LL ++ A + +++ Sbjct: 332 HTLFVEASVGIATGAAGLGRPDDLLRAADVALYRAKAEGKGR-YHVFDRRRDAPELERLR 390 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L N +R A+ G L LY QP+ + G + +L G M P +F+P+ + L Sbjct: 391 LENELREAVRSGQLELYYQPVYSLELGRIAGMEALLRWNHPRRGTMLPGEFVPMAEETGL 450 Query: 548 SARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 VLE + + P VNL + + RL + + P Sbjct: 451 IVPVGRWVLEEACRQARAWELGLPEGASPMVGVNLSLRQFQNPGLVEHVARLLRETGLDP 510 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL-KRLQADIIKID 663 + LEITE A + +S++ +E+L+ G + IDDFGTG ++ + R + + +K+D Sbjct: 511 ALLTLEITESVAMHDVDSTVRTLERLNAMGVWLVIDDFGTGNSSIAYVGSRFKMNHLKLD 570 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 G FV++ + + + I+ + D A A L V+AE VET+ Q L +LG +++QGY + Sbjct: 571 GAFVREFLDDPENPTILPGLIDFAHAVGLRVIAEGVETRGQLERLRELGCEFVQGYYVAP 630 Query: 724 PQPLAD 729 P A+ Sbjct: 631 PLGAAE 636 >UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Halorhodospira halophila SL1 RepID=A1WT40_HALHL Length = 836 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 94/463 (20%), Positives = 180/463 (38%), Gaps = 20/463 (4%) Query: 284 GVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 T ++ + + L ++ R + + +DPLT LPN Sbjct: 347 RDGTTFATLVTVRAIYDDAGHLTHYLAVLADISRLKEYQSQLERIMHSDPLTGLPNRLVF 406 Query: 341 EQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + Q + L +++L+ ++ G + ++ + L + E Sbjct: 407 QDRLHQALVANQKQTGFFAVLSLDLNDLKAINYSLGHAVGDAILQQLAERLRNALCEEHT 466 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++L G + + L + + + + Sbjct: 467 VARLGGDEFGVLLLGVRDASEVAAITEDLSKGLDEPFQIADRAIPIAASIGIAVYPEQDA 526 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 L Q + Q+ ++ E ++ Q ++V L + +R AL+QG L L+ Q Sbjct: 527 GAADLFQQANAAMHQAKREG--VSYRFFSEDLTEQARERVQLGSELREALNQGALELHYQ 584 Query: 510 PIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + ++ G ++P++F+P+ + L VLE + Sbjct: 585 PQIDLSSGAWVGLEALIRWHHPVQGWISPERFIPVAERIGLVTTLGAWVLEQACRQGRIW 644 Query: 567 PCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R VN L ++A R++ R + + + +E+TE + Sbjct: 645 LDAGFEFGRLGVNFAAPELSAPDLAERVLAALDRARLPARYLEIEVTERLLVDPDPEVIQ 704 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ L G +A+DDFGTGY+ L+ L D +KID FV + + I ++I Sbjct: 705 QLQLLRNHGVTVALDDFGTGYSALSYLRDLPVDRLKIDRSFVDGLPDDERTLAIAQAIAG 764 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L + +++AE VET Q+ L +G + QG+L GRP P+A Sbjct: 765 LGRNLGFTIIAEGVETPAQREALIGIGCPWAQGFLFGRPAPVA 807 >UniRef50_C5SBC3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBC3_CHRVI Length = 1147 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 89/486 (18%), Positives = 182/486 (37%), Gaps = 20/486 (4%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWL 318 P L ++ + + + + + + + Sbjct: 652 PILATLQQGQDC--HATSEVLWRRDGSCFPAEYWATPVRRDHRIEGAVVTFHDISARQRA 709 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 A D LT LPN ++ + + L +D+ + ++ G Sbjct: 710 EAEIQHLAFHDSLTGLPNRLLFKEELGQALAALRRDDQRFALHMLDLDHFKDVNDSLGHP 769 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH 427 + +R++ L + + + L + G E L+ S G + + + Sbjct: 770 VGDELLRAVAERLTAITRGTDVLARFGGDEFALLQSKIGEIGDAAALATKIIEAFGQAFW 829 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + +D+ D + ++ + ++ + ++ Q + Sbjct: 830 IDGNRIDINTSIGILIADQACHDVDDIITRADVALYKAKEAGRG-THAFFADSMTQQLRR 888 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ + + A+ +L + QP + G + ++ G+ P FLP+ + Sbjct: 889 EMEIARELIQAIQNDELFIDYQPQFDLDSGRLVGMEALVRWHHPREGVRQPAAFLPVTEK 948 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL++ + R +VNL + + I+ + ++ Sbjct: 949 RGLIRPLSDWVLKAACCQIRDWSDRGLEFGRVAVNLCAQQVGDPDFGDNILAVLEQTGAR 1008 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + LE TE + + +I +L + G AIDDFGTG+++ + L++ + D IKID Sbjct: 1009 PEHLELEFTETVLIAADARTQADIARLSELGIHFAIDDFGTGFSSMQYLRKFRTDKIKID 1068 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 F++D+ + DA IV++ L A L +AE VET++Q L + G + +QGYL GR Sbjct: 1069 REFIQDVTQDAGDAEIVKATIALGTALGLITIAEGVETEEQAEFLRRHGCRQVQGYLYGR 1128 Query: 724 PQPLAD 729 PQ D Sbjct: 1129 PQSPED 1134 >UniRef50_Q4ZPP9 GGDEF n=14 Tax=Pseudomonas RepID=Q4ZPP9_PSEU2 Length = 763 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 139/658 (21%), Positives = 230/658 (34%), Gaps = 57/658 (8%) Query: 121 VWQRLFW---LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + R W L G+ ++ F PLKI D T++ LL + L Sbjct: 56 LKSRRLWKALGALCLAGGVWAMHFISMLAFQAPLKI-----AYDLSITLISLLIVLITAL 110 Query: 178 IYNMLFYYLTRMIV-------------SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 + + S + + E R F LS L A+ Sbjct: 111 VAMRALTVPELTLRRCLISAVVMGVGISVMHYLGMSAMRSTATQYYEPRMFALSILVAVL 170 Query: 225 VLLLLLCTPYENDFIAGYLVPVF--FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + LL P G +F + LG G L + + + Sbjct: 171 SSIALLTLPRHLRQYNGMFHQMFRYAVSLLLGAGLLTMHLMGMKALRLVIPEGTELHGPA 230 Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRI----------------YHRSEWLNRRWHLQA 326 + L L+ + + + + + A Sbjct: 231 TENSQQLGLTIAAIALLIIAGSISAAMADKKLQGKEHDLQRVNALLTQLDQARVSLQQVA 290 Query: 327 LTDPLTLLPNFRALEQ----APE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 DPLT L N R Q + + L ID+ + ++ G ++ Sbjct: 291 HYDPLTNLINRRGFNQIFAEKLQEHTYNNGMLAVMFLDIDHFKRINDSLGHDAGDELLKV 350 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDM 435 I + + + + + G E ++LS +H+ + + I + M Sbjct: 351 IADRIRGATRVQDVVARFGGDEFCILLS-IPDYEEARHLAHRVMQKMKETIALAGRRMVM 409 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 F + T LL QS ++ + + + ++ L + Sbjct: 410 TTSIGIAVFPRDGSTCDELLKHADLALYQSKDKGRN-GVNFFNPALKTKASLELQLEEEL 468 Query: 496 RTALDQG-DLLLYAQPIRNKEGEGY---DEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 R AL +G L +Y QPI + + ++ G++ P +F+ + L A Sbjct: 469 RNALREGTGLQVYYQPIVDMRTGHVAKLEALVRWNHPHHGLLVPARFIGIAEANGLIAEL 528 Query: 552 DLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 D VL L T H + SVN LTL + + + R +P + LE Sbjct: 529 DNWVLRRACHDLRTLHQEGLEQLIISVNCSALTLGRNELVEEVERALADADAAPGRLELE 588 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE N +++ ++ + G ++IDDFGTGY++ LKRL D +KID F+ DI Sbjct: 589 VTENALMGNISNTILMLKHIRSLGVSLSIDDFGTGYSSLAYLKRLPLDTLKIDRSFIIDI 648 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + D IV++I +A L VV E VETQ Q L + G Y+QGY+ RPQPL Sbjct: 649 PQSPQDMEIVQAILVMAHTLRLKVVTEGVETQAQLEFLRQFGSDYVQGYMFSRPQPLE 706 >UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BRL9_DELAS Length = 881 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 99/444 (22%), Positives = 173/444 (38%), Gaps = 16/444 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + D LT LPN R L + + Sbjct: 413 GEIEHYIGVFTDISHIKAHEAELERVTHYDLLTGLPNRRLLIDRLNQAMLRTAREGRSLA 472 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 C L +D + ++ +G + + L +++ + L +L G E +L+LS + Sbjct: 473 VCFLDLDGFKEINDLHGAAAGDALLVGVAAHLKSVLRSEDTLARLGGDEFVLLLSHIGSA 532 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 +++ + SR + + L + + +Q LL + Sbjct: 533 EHCATILDRVLEAASRPVPVQDRVLSVTASLGVSLYPDDQADPDLLLRHADQAMCVAKQA 592 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 + + + L L +R AL++G+ LL+ QP G + +L Sbjct: 593 GRNR-YQLFDPENDRKAHARRLQLGWLRQALEKGEFLLHYQPKVELGGGRLVGAEALLRW 651 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 G+ P +FLP +A +L V+ + A S+N+ LL Sbjct: 652 HDPRQGLRAPGEFLPFVAGSDLERPLGDWVIGEAVAQAARWFGQGLDLCVSINVSANQLL 711 Query: 586 QKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++ ++ R+ + P + LEI E A ++ E ++ + Q + G R A+DDFGT Sbjct: 712 DGGFHAKMAQVLARHPDLPPHLIELEILESAAIADMEQAIQVMGQCRQLGIRFALDDFGT 771 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L++L +KID FV+D++ + D IV + LA L VAE VET + Sbjct: 772 GYSSLTYLRKLPVQSLKIDQSFVRDMLADPDDLGIVEGVIQLASTFQLESVAEGVETPKH 831 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L +G QGY I RP P Sbjct: 832 ARRLRDMGCHVAQGYGIARPMPAD 855 >UniRef50_C5SMP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMP6_9CAUL Length = 929 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 99/436 (22%), Positives = 174/436 (39%), Gaps = 21/436 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRI 357 + + R A D LT LPN R LE+A + + + Sbjct: 483 VTTIDDITARRRDEDRIAHMARHDGLTGLPNREHFNQHTDRELERAARTGHKVAAVAIDL 542 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR---L 414 D + ++ G ++ I L L + E + ++ G E V + E + Sbjct: 543 DRFKEINDVRGHAAGDQVLKIIAERLQRLCGDTEFVARIGGDEFACVKTSAEARELSDFV 602 Query: 415 QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH---HHV 471 + L+ I + + G + + + +PL+ ++ A + Sbjct: 603 SRLDAALHD-PIDLDGFEVSPGGSMGVAVYPDDADGREPLMNNADLALYRAKAQPRINGH 661 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKY 528 A+ E + + L + A+ + +L ++ Q R+ GY+ +L Sbjct: 662 EAVCYYEARMDEAARDRRALAKDLWQAIARDELRVHYQVQRSVTSQAITGYEALLRWQHP 721 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G ++P F+P+ + VL + AT + +VNL P+ L + Sbjct: 722 QRGFVSPADFIPVAEECGAILEIGEWVLRTACAEAATWTNGA---KVAVNLSPVQLTHPD 778 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + G + + +SP+ + LEITE + +++ + Q+ FG IAIDDFGTGY++ Sbjct: 779 LVGMVQSILIETGLSPRRLELEITESTIIGDKARALHILRQIKGFGVTIAIDDFGTGYSS 838 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 + L D IKID F+ + + I+R+I L ++ + V+AE VET Q LL Sbjct: 839 LDTLNAFPFDKIKIDRSFLMEAEQSPQARAIIRAILALGRSLEVPVLAEGVETVAQLELL 898 Query: 709 HKLGVQYLQGYLIGRP 724 G QGY GRP Sbjct: 899 RSEGCDEAQGYYFGRP 914 >UniRef50_B8HQZ5 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HQZ5_CYAP4 Length = 872 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 99/508 (19%), Positives = 189/508 (37%), Gaps = 53/508 (10%) Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRI 311 T L P LN A + L +++Q+ + E + ++ +F+ R+ Sbjct: 366 TWTSRWLVRPILNTIEAANALSQGDWSQSVPEPHSQE-----LASLARAFN-------RM 413 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRID------------- 358 ++ ++ A D LT L N A E+ R D Sbjct: 414 ANQLRVSFQQLEHHARHDSLTGLLNRDAFRVRLEEA------FARHDWQLLHQPGEKSLL 467 Query: 359 --------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK----LYQLPGSELLLVLS 406 + ++ G ++ + + + LL + + + + G E ++++ Sbjct: 468 AVLLLDLDYFKLVNDSLGHILGDQLLIEVTQRLLHCLSNFDDANYAIGRFGGDEFVILID 527 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + R + + L Sbjct: 528 NIQDVTTATRLAGQICKDLQRSFTLSGNEFFISTSIGIVLSTTGDRQADTFLKNADIALY 587 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 ++ A+ + + V ++ L + A+D+G+L+L QPI + + G++ Sbjct: 588 RAKANGKA-GYEVFDAQVHTGAKDRLRLETDLHRAIDRGELMLSYQPIFDLQRDQLAGFE 646 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSV 577 ++ G+++P F+P+ + L + VL+ + T SV Sbjct: 647 ALVRWQHPTEGLISPSVFIPIAEESELIVKLGWWVLQQACTQMQTWQQQFPCSQDLVISV 706 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N Q ++ RI ++ + + PQ + LEITE S E + +++L G + Sbjct: 707 NFSGKQFFQPDVLERIWQILDQTGLKPQHLKLEITETVLMSYGEVTKAKLKRLSDAGIHL 766 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFGTGY++ L R +KID FV ++ IV +I LA L V+AE Sbjct: 767 SIDDFGTGYSSLSYLHRFPVQTLKIDRSFVSEMGVQGEGLEIVEAIVTLAHKLRLDVIAE 826 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQ 725 VET++Q L G +QG+L+ P Sbjct: 827 GVETREQLEKLRHFGCDQVQGFLLSPPL 854 >UniRef50_D2LY77 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LY77_BACS4 Length = 886 Score = 546 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 87/430 (20%), Positives = 186/430 (43%), Gaps = 16/430 (3%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSR 365 + + A D LT LPN + ++ E + + ++ + ++ Sbjct: 451 LQKSEEKLQKLAYYDMLTGLPNRQHFQKYLESLLQSEANKKAPTIAVMFVDLNQFKQIND 510 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ--HMVNILNS 423 G + ++ + L+ L +E K+++L G E ++VL+ + + + + L + Sbjct: 511 TLGHKVGDELLKLVSNKLMKLEKEKIKVFRLGGDEFVIVLTEADKKEVKRFGGKLQRLFA 570 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 I NN L + + + +TL L+ + + ++ + Sbjct: 571 EPIILNNMSLYVTASFGVSMYPKDGDTLDRLVRFADMAMYNAKEKGRN-YIQFFDQSMKA 629 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLP 540 ++++++ N +R AL++ L+ QP N + + G + ++ + G ++P KF+P Sbjct: 630 DFSERMMINNGLREALERNQFELHYQPKVNAKTDEMSGMEALMRWHHPELGNVSPGKFIP 689 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + L + D L K +VN+ ++ + R Sbjct: 690 IAEESGLILKIDEWGLLQACKQNKQWQDAGLKKVPVAVNISAKHFYHGYLSEMVKRALTI 749 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + Q + +EITE + ++ + L + G +++IDDFG G+++ +L +L Sbjct: 750 SGLEAQYLQIEITESVFIKKMDDVIHTLNGLQEMGVKVSIDDFGNGFSSLNQLLKLPISE 809 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +K+D F+++I N A +V+ I +LA + L+VV E VET+ + ALL + LQG+ Sbjct: 810 VKLDREFIRNIGENEKQASMVKVIIELAHSLQLNVVGEGVETEDELALLQQYHCDELQGF 869 Query: 720 LIGRPQPLAD 729 L +P ++ Sbjct: 870 LFSKPVQASE 879 >UniRef50_B1WWC9 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=B1WWC9_CYAA5 Length = 661 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 88/479 (18%), Positives = 180/479 (37%), Gaps = 27/479 (5%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTD 329 + + L + + + ++ + + + + + AL D Sbjct: 167 GIQDIEYRILWPNDEIHWIRVRSRLIKDDQGNPIRIDGLTTEITEYKQIKDQLLHDALHD 226 Query: 330 PLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 LT LPN L EQ + L +D + ++ G + + + Sbjct: 227 NLTGLPNRTLLMDRIEQGLKRCQRDKNRRFALLFLDLDGFKLINDSLGHLTGDQLLIILS 286 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 ++ + L +L G E +++L + + + I N + + Sbjct: 287 HRFSRCLRAEDTLSRLGGDEFVILLENLSNIDEAIAIADRIHNILKEPILLQNEEIFISV 346 Query: 438 GAAWGRFDGNQ-----ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + LL ++ A + + + K++ + Sbjct: 347 SIGIVLGGEQSVYNNLDQVAELLRDADTAMYRAKAKGPGTS-KVFKPSMHTHVMKRLQVA 405 Query: 493 NTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N ++ A+++ + ++Y QPI + +G++ ++ + G++ P F+P+ + Sbjct: 406 NELQRAIERQEFIVYYQPIISLDSDRIDGFEALVRWQHQEKGLIAPTDFIPIAEETEAIL 465 Query: 550 RFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 + D VL L SVNL L ++ + + + + Sbjct: 466 KIDQWVLRHACTQLGLWQQQFPNLGSLTMSVNLSSKHLAHPSLIEVLDEILAETGLGGSS 525 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + +EITE +++S+ +EQ+ + + +DDFGTGY++ L +I+KID F Sbjct: 526 LKVEITESFVMEQSKTSLDILEQIKQRKIELCLDDFGTGYSSLSYLDCFSFNILKIDRSF 585 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +K +V I+++I DLA ++ VVAE VET Q+ L L Y QGY P Sbjct: 586 IKRLVAEQDRCEIIKAIVDLAITLNMQVVAEGVETNVQRKRLKALNCGYGQGYGFFPPL 644 >UniRef50_A6T0I9 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T0I9_JANMA Length = 641 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 103/497 (20%), Positives = 198/497 (39%), Gaps = 26/497 (5%) Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 +++ L Y + +V+ + L+ Y++ Sbjct: 141 YVMARLTARHRDYLQRAIIVSVAVVLLMFGLLVIAYRQRRLYNVLAASEQEK-------- 192 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDN 359 + + E R LQA D LT +PN +A L +D Sbjct: 193 -RSLIGQLEQEKGRALLQASHDYLTGIPNRMLFYELAAAELARARRSRKLYGMFFLDLDK 251 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ + R L ++E + L +L G E ++++S +E + + Sbjct: 252 FKLINDTLGHAVGDLLLQGVARRLRESLREYDLLARLGGDEFVMLISEMTSENDIAKVAA 311 Query: 420 ILNS---RQIH-WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L + +++ + + + ++ LL + A Sbjct: 312 KLVEVVREPFPDLDGHDIEISPSIGIALYPRDGQNVETLLTHADAAMYHAKAAGAG-TYR 370 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 + ++ + + V LL + A+ + L+ QP + G + ++ + G+ Sbjct: 371 FFDSSLNASSARDVELLTRFKRAIRDDEFCLHYQPRVELQEFGLVGLEALVRWQHPEHGL 430 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAG 591 + P+ F+ L + +L V+++ + +A ++N+ P L + Sbjct: 431 IFPNDFITLAEENDLIVLLGRWVIDAACRQIADWRAAGLPLVPVAINVSPKQLKDSALLE 490 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ RY I P + +EITE + +++ +EQL G RIA+DD+GTG++ + Sbjct: 491 TVMETLARYQIEPGLLEIEITEGCFIEDFDTANRVLEQLRANGLRIALDDYGTGFSGLKN 550 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK+L IKID FV+DI + DA+IV S LA L VVAE VE+++Q L Sbjct: 551 LKKLPIYAIKIDRSFVRDIRNDNSDAVIVASTISLAHNLGLQVVAEGVESKEQLVHLKTA 610 Query: 712 GVQYLQGYLIGRPQPLA 728 G +QG+ RP A Sbjct: 611 GCDQVQGFYFKRPVAAA 627 >UniRef50_Q5P8V8 Predicted response regulator receiver n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P8V8_AZOSE Length = 599 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 117/546 (21%), Positives = 197/546 (36%), Gaps = 40/546 (7%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R A + + A ++ + VP FT Sbjct: 49 HRKRAALRDALELNGFVVDEADSGPSVIGRIARIRPHLLLLDAVPPCIDGFTTCRRLREL 108 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 P + L + V + L + +++ VR + R Sbjct: 109 PQCGELPVIMITSLDDRQIERAFAVGASDYVIEPLHPHV-----VVHRVRRTLETSRAER 163 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRI-----------------DNLEFM 363 A TD LT LPN E + + D +F+ Sbjct: 164 HVRHLACTDTLTGLPNRTRFETMLQAR---------LAPTRNPLPALAVLLLELDRFKFV 214 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + G + +R+ R L+ + + +L G + ++L + + Sbjct: 215 NDTLGHELGDRLLRAASRRLVRAVGTGACVARLGGDKFAVMLQNVSAPTVAS-VARTITT 273 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 ++ + + + + E LL ++ A E Sbjct: 274 ELAKPYVLDGHEIFVRASIGIAVHPSDGEDAGALLRHAEAAMYRAKRSSQRRA--FYEAA 331 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + G + L + + AL+ +L+L+ QP + + ++ G++ PD Sbjct: 332 MEGSARAHLRLESDLHHALEHSELVLHYQPEMEAASGRMVAVEALVRWQHPSHGLIGPDT 391 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+PL + L VL+S L R +VN L ++I R+ Sbjct: 392 FIPLAEEVGLIGPIGAWVLDSACAQLKAWRDAGHSLRVAVNFSADQLQDRDITDRVAAAL 451 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 +R+ + +++EITE +++ N+ L + G R+AIDDFGTGYA+ LK L Sbjct: 452 ERFGLQADDLVVEITESVWLDPESAAIDNLHHLKRLGVRLAIDDFGTGYASLSYLKHLPV 511 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 DI+KID FV D+ +DA IVR I LA L V+ E VETQ Q AL+ +G +Q Sbjct: 512 DILKIDRSFVTDLAEVGVDAAIVRGIVSLAHKLDLEVIVEGVETQTQCALVRDMGCDVVQ 571 Query: 718 GYLIGR 723 GYL+GR Sbjct: 572 GYLLGR 577 >UniRef50_A6D1R5 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Vibrio shilonii AK1 RepID=A6D1R5_9VIBR Length = 947 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 96/461 (20%), Positives = 183/461 (39%), Gaps = 35/461 (7%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------ 342 S+ I+ V + V L + E + A D LT LPN R + Sbjct: 477 LSVLLIMTVFNNHKVLLRRVKSRTKELEASRDQLKRYAFNDALTNLPNRRMFIEQTNHAL 536 Query: 343 --APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 A + + L ++ + ++ G + + + L ++ ++ L + G E Sbjct: 537 RLAERNRSIAAVLFLDLNRFKHVNDSLGHDFGDKLLVEVSKRLSGCLRSSDVLARFGGDE 596 Query: 401 LLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +++ + + + + I L + + + + + LL Sbjct: 597 FTILIENLTNIEQAIALSKKIINGLRKPIQIGRESLTISTSIGIAAYPKDGQNVDDLLRA 656 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NK 514 ++ + + Q ++ + + + AL++G LY QPI + Sbjct: 657 ADTAMYKAKES--SVGYFCYANTLRKQAQHKLFIESELPRALEKGQFELYYQPIIELRSG 714 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 + G + +L G+++PD F+P+ V+E K + Sbjct: 715 KHLGCECLLRWNHPTYGVISPDSFIPIAEVSGEIIPIGAWVIEQACKQIRVWQDQ----- 769 Query: 575 FSVNL---------MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 N+ + L+ + ++ +RY ISP+A+ LEITE N ++ Sbjct: 770 ---NIYHKKVSVNVSVVQLVSGQLIDDVMDPLQRYGISPEALELEITESVLVQNMGQAIR 826 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 I +L K G IAIDD+GTGY++ LK+L D +KID +F+ + + D IV S Sbjct: 827 FITELKKIGVNIAIDDYGTGYSSLSYLKQLPVDSLKIDRIFIDQL--HPEDMTIVSSTLQ 884 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +A ++V+AE ++T +Q +L Q+ QG+L +P P Sbjct: 885 MANELGINVIAEGIQTAEQMKILIDHDCQWGQGFLFSKPLP 925 >UniRef50_UPI0001926D08 PREDICTED: hypothetical protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926D08 Length = 487 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 100/474 (21%), Positives = 179/474 (37%), Gaps = 21/474 (4%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV--ETEYSLAFILAVLISFSVCLLYM 308 + V ++ P L S L + + Q + L + L L + Sbjct: 1 MPVLVSRVLRPIERLKEHASALLDHSRDDGPGQVFVWRRQDELGLLGRHLGRVQEELRGL 60 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNL 360 + N + A D LT LPN A + + +D Sbjct: 61 F---TQLGNKNAQLQQMAFYDQLTGLPNRSLFIDLVQREMLSAQRNQQQFGIFFIDLDRF 117 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + R L +++E + + + G E L+++ E L M Sbjct: 118 KAVNDSMGHAAGDALLIEVARRLREVLREVDVVCRQSGDEFLVLVRDIEHWESLGEMAQR 177 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + N + + + + + + L+ Q+ Sbjct: 178 VLRSIEAPVVLANAPVKVSASIGISLYPEDGQDFETLVKHADIAVYQAKTLGRAR-YSYF 236 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 ++ + + L + A+ L+L+ QP E + ++ G++ Sbjct: 237 HSELNSRLQANLELEQELAYAIGHDQLVLHYQPQVCAKTGEMVAVEALVRWQHPTRGLLY 296 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRI 593 P +F+ L + A + L + LA +VN+ L + + Sbjct: 297 PAQFIGLAEESGRIAEMGVWTLREACRQLADWSARGIHIGNMAVNVSALEFRDHRLLDSL 356 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 I PQ + +EITE + E+S IE+L + G IAIDDFGTGY++ LK Sbjct: 357 QAALDASGIPPQRLEIEITESVLMAETETSQRIIERLRQIGVGIAIDDFGTGYSSLAYLK 416 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 RL+ + +KID FV D T++ IV+ + LA+A SL+VVAE VET++Q+A Sbjct: 417 RLRPNQLKIDRSFVNDTATDSDSRAIVKGVVGLAEALSLNVVAEGVETEEQRAF 470 >UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 Tax=Proteobacteria RepID=A6V697_PSEA7 Length = 858 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 93/447 (20%), Positives = 179/447 (40%), Gaps = 18/447 (4%) Query: 293 FILAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQAPEQE 347 + + + V + + + D LT LPN LE+ ++ Sbjct: 391 LTATAIRNGAGDGYRGTVADITDEVEAHAKIQHLSQHDALTGLPNRNKLFGFLERQLAEK 450 Query: 348 ---AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + L +D + ++ YG + +I L ++ + + +L G E ++V Sbjct: 451 AGKSPLAVLMLDLDRFKPINDQYGHPAGDAVLHAIAERLRASTRDLDMVARLGGDEFVVV 510 Query: 405 LSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + ++ L R+I + +G + + + LL Sbjct: 511 SVHVTSRLEVEKFCIRLIEVINREILHDEQVFHVGASIGVALASEHGDDPRALLRCADVA 570 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 ++ A E + ++ +R AL +G+ LY QP Sbjct: 571 MYEAKAAGRN-TWRFYSEAMDFHLAEKKQREAELRAALQRGEFELYYQPRYRTEEGSIAS 629 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 + ++ G++ PD+F+ L + +L + VL A+ P + SVN Sbjct: 630 AEALIRWHHPRRGMIGPDEFIGLAEESDLIVQIGNWVLRQACSSAASWPGE---VMVSVN 686 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + P + +I ++ + H+ + + LE+TE ++ + ++ + L + G R+ Sbjct: 687 VSPAQFISGDIVWQVREALRLAHLDARRLELEVTENVMLNDVDGALRTMTALKELGVRLN 746 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L+ D IKID F+ ++ D IV++I +L A +L V AE Sbjct: 747 MDDFGTGYSSLGYLRTYPFDSIKIDKRFIANMEKTGRDRSIVQAIINLGNALNLRVTAEG 806 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQ 725 VET+ Q +L LQG+L+ RP Sbjct: 807 VETEGQMRILRDEKCHELQGFLLSRPV 833 >UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X759_METSD Length = 765 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 86/441 (19%), Positives = 167/441 (37%), Gaps = 30/441 (6%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYG 368 + QA D LT LPN + + + + L +DN + ++ G Sbjct: 311 ASQKLIWKQANYDFLTGLPNRPMFHKQLAEEIHKSLQHQQPLVLMFLDLDNFKQINDQLG 370 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 + + + + ++ L +L G E +VLS + + +++ + + S Sbjct: 371 HSIGDKLLVETGARIAAVARDCTLLARLGGDEFTIVLSNVQNQQQVEWLCERILRQVSLP 430 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 N + + F + ++ L+ ++ + Sbjct: 431 FTIENHVVYVTTSIGIASFPEHSRDVETLMKYADQAMYEAKRLGRNR-YQFFSPSMQELA 489 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ + N +R AL++ +L++Y QPI + E + ++ G++ P +F+P+ Sbjct: 490 AHKLQVSNDLRHALNRHELVMYYQPIVDLATNEIHKAEALVRWQHPTRGLVPPFEFIPVA 549 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPR---------------FSVNLMPLTLLQK 587 + + R V + T + R S+N+ PL Sbjct: 550 EETGMINRMGDWVFRQSARDTVTLVQESLASRSAPPEGNVVDATIFQVSINVSPLQFQSS 609 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + + +EITE ++ + Q G +IDDFGTGY+ Sbjct: 610 QELQTWQAYLDQIGLPAECLAIEITEGLLLEASDQVKATLTQFRDAGIATSIDDFGTGYS 669 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ D +KID FV+++ D ++ I D+A + V+AE VET+ Q L Sbjct: 670 SLAYLKKFHIDFVKIDRSFVQNLGAGNDDMVLCEVIVDMAHRLGMRVIAEGVETEAQLEL 729 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L + G + QGYL P Sbjct: 730 LKRAGCDFAQGYLFSPALPFD 750 >UniRef50_A4FDX2 PAS:GGDEF n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FDX2_SACEN Length = 914 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 102/464 (21%), Positives = 186/464 (40%), Gaps = 16/464 (3%) Query: 280 NFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 ++ L+ L ++ S R +A DPLT L N Sbjct: 446 RLVRPDGRSVWLSLTSRSLTPQDRPPHMVVTSFTDITDSRAARERLEYEATHDPLTGLAN 505 Query: 337 FRALEQAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + + +DN + ++ G + +R + L +E + Sbjct: 506 RTLALRHLAVSRDRTRAIAVLFIDLDNFKLINDSLGHGVGDDVLRIVGERLFRTSREEDL 565 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRF-DGNQ 448 + +L G E ++++ + L+ + L + IH L + G+ Sbjct: 566 VGRLGGDEFVVLVHDESDDDVLRELATGLLAALTEPIHVQGRQLHVNGSIGIVLSRPGDT 625 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL Q+ + + + + ++L +R A+ Q L + Sbjct: 626 RAGPELLRDADVAMYQAKTRGGGR-YEFFDVELRESMQRSMVLEQDLRHAVQQDQLWVAY 684 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + + G + +L G ++P +F+PL Q +L +L + +A Sbjct: 685 QRVVDLRDERTVGVEGLLRWTHPVHGTVSPGEFIPLAEQSDLINSIGAHMLRMATRQVAA 744 Query: 566 HP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +G R + NL P L + + + + A+ LE+TE + +S Sbjct: 745 ERERGGEGLRLNANLSPRQLDDPYLQVLVKQALTDAGLPAHALCLEVTENAIMHDPAASA 804 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L + G R+AIDDFGTGY++ +L+RL D +KID FV D+ ++ +++ SI Sbjct: 805 RVLSSLRELGVRLAIDDFGTGYSSLAQLRRLPLDTLKIDRSFVTDLDSSEELRVMINSIV 864 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A A L VVAE VET +Q LL ++G QG+ +GRP P+ Sbjct: 865 AMAHAVGLDVVAEGVETARQLDLLGEVGCDQAQGFYLGRPGPIE 908 >UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepID=B2VE87_ERWT9 Length = 749 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 221/725 (30%), Positives = 360/725 (49%), Gaps = 9/725 (1%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 + + L L +V++ ++ +S I Y++L ++P+ +M+++L +F WR + + Sbjct: 13 RWWGLPLLLALVMLPVASALSVRLWISDGYVYLIYLPIAMMIAMLMVFDWRAFPGIAVAL 72 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSR-YVWQRLFWLGL 130 L + Q V++G + R Q+ TRW V RL WL L Sbjct: 73 CFHYLG--RYTVPQVLVLVGMFLASLAAGWWGYRTQIKTRWSVSPGELSQVSIRLIWLVL 130 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 V LV PL S F D+ ++ +++ SL A L LFY+ R++ Sbjct: 131 VISTLFVILTQLVLPIGILPLHYSVFVDDSFSLRALLNYQSLLLASLGTVPLFYFSLRLL 190 Query: 191 VSPHFAQIL---WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 +P F +L +R I+ + + L L +L ++L L +N Y +P+ Sbjct: 191 RNPRFIIMLKNRCQRQISAGVTWREFLLWLVLLMSLLIMLTLFRANQDNLLTTEYGLPLL 250 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ-GVETEYSLAFILAVLISFSVCLL 306 + + Y F +L+W + + L F+ V Y+L I A L+ F++ +L Sbjct: 251 LPLMLWAALRFGYLFTSLSWGILLVVLYQLRDRFMDLTVMKPYNLLVISAYLLVFTLVIL 310 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRH 366 M I R L R ALTDP+ LPN RAL + + S C LRI +L+ +SR Sbjct: 311 LMSAISTRQRQLLTRAKELALTDPIIGLPNLRALNKDLAFVSCSSLCFLRIPDLDRLSRT 370 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQI 426 YGL +R+ RS+ L P + E +YQLPG +L++ L+ + R++ + + S + Sbjct: 371 YGLRLRIQYKRSLAIYLRPNLFAGESIYQLPGFDLVIRLNHAVLQSRIEELEARIKSYHL 430 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD-SREEMVSGQT 485 W+ + G ++ + L LLG++S LAE S H + L S V Sbjct: 431 SWDGLPIHPDIGLSYCTVNTPVLHLYELLGEMSALAETSLRSGHAVNLQQSTNVTVQRHI 490 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY-DEILARLKYDGGIMTPDKFLPLIAQ 544 T+++ +L+ I+ AL G L +Q I G+ Y + +L + G + P F+P++ + Sbjct: 491 TEKLAMLHDIQFALQNGSFQLMSQKICGVRGDDYYEILLRMVNTQGEYIQPASFIPVVQE 550 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 F L+ D VLE L+++ H G RF++NL TL + + I K + + P Sbjct: 551 FGLTWEVDRMVLEQALRFIHRHRDRLPGIRFAINLFAATLCRPQLTEEIASSLKTHGVEP 610 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 +I+E+ E S+ ++ QL K G R+AIDDFGTGYA+Y RLKR Q D++KIDG Sbjct: 611 WQLIIEVKESPMLSDNSWGNRSLAQLRKLGCRVAIDDFGTGYASYSRLKRAQVDMLKIDG 670 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV++++ N+LD I+ SI +++ K + +VAEFV+T++ L KLGV YLQG ++G P Sbjct: 671 SFVRNMLNNSLDYQIIVSICAVSRLKRMQIVAEFVQTEEVAEELRKLGVDYLQGEIVGMP 730 Query: 725 QPLAD 729 PL D Sbjct: 731 IPLQD 735 >UniRef50_A1U2V9 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U2V9_MARAV Length = 908 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 89/465 (19%), Positives = 166/465 (35%), Gaps = 18/465 (3%) Query: 278 NQNFLQGVETEYSLAFILAVLIS--FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + ++S ++ +R + + H A DPLT L Sbjct: 426 RARVRDADGQWRDMEGTFTAMLSVPGVNGVVLSLRDLTQLKAAQSELHRLAFYDPLTGLA 485 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + + L +D + ++ G +R + + L + Sbjct: 486 NRQLFRDRLNHVVRRSRRSGEAAALMFLDLDGFKRINDTLGHDAGDELLRQVAQWLEGCV 545 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRF 444 +E + + +L G E +++LS + + ++I N+ + + Sbjct: 546 REEDSVARLGGDEFVVLLSRISGSEAAGKVAENILRRLCQRIRLNDHEVGVTVSIGITMI 605 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + E L+ ++ ++ Q +++L + TALD Sbjct: 606 PHDSEDAGALMKYADLAMYRAKELGRN-TYQFFTPAMNIQAARRLLQQEELATALDGDRF 664 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +L+ QP + G + L + G+++ +F+ L + L R L Sbjct: 665 VLHYQPKVDLATQRVIGVEAFLRWHHPEKGLVSAQQFITLAEETGLIIRLGELALRQACI 724 Query: 562 WLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + + + +VN L I R+ +SP+ + LE+ E + Sbjct: 725 QVQALERAGFESLKMAVNFSVRQLTDSGFLDMIRRVITETGVSPERLELEMPAELLNEDP 784 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + L+ G + +DDFGTG + L++L D+IKID F++DI N + Sbjct: 785 RMLRELLVSLNDLGVCLILDDFGTGSCSLVALQQLPLDVIKIDHRFIRDIPYNVSATDVA 844 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 ++ LA L+VVAE VET QQ L G QG L P Sbjct: 845 SAVIALAHKLHLTVVAEGVETLQQLTFLKSAGCAQCQGNLFSYPL 889 >UniRef50_A3ITH6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Response Regulator Receiver modulation n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ITH6_9CHRO Length = 635 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 84/436 (19%), Positives = 174/436 (39%), Gaps = 34/436 (7%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---------FCCLRIDNLEFMSRHYGL 369 + A D LT L N +QE + + +D + ++ G Sbjct: 187 EAQLKHDAFHDKLTGLINRELFVNLLKQEMKTASVNSDYLYGVLFIDLDGFKMVNDSLGH 246 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQI 426 ++ ++ + + L ++ ++ + + G E ++L + + + + S+ Sbjct: 247 LIGDDLLKVVSQRLKTCVRSSDAVARFGGDEFAILLKNLKELSLAEVIAQRILKTLSQPF 306 Query: 427 HWNNTGLDMGYGAAWGR----FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + NN + +G ++ +L Q+ + Sbjct: 307 YLNNNEVAIGASIGMTFNIFKYNQ----ATEILRDADIAMYQAKRQGKGH-YQCFNPDMQ 361 Query: 483 GQTTKQVLLLNTIRTALDQ-------GDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 ++ L ++ A++ LY QPI ++ G++ +L G Sbjct: 362 ALVFARLQLERELKKAVENIKNNEFSQQFSLYYQPIVHLKTRKINGFEALLRWQHPTEGW 421 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNI 589 ++P KF+P+ + L +L+ + + ++ R ++N+ + Q N Sbjct: 422 ISPQKFIPIAEETQLINPLGWWILKQVCQQMSYWTKQFPNHDSLRVNINVSAIQFKQDNF 481 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +I + + H+ P+++ LEITE + S+ +++L G + IDDFG GY+ Sbjct: 482 VEQIGLIIQESHLPPESLKLEITESYTLNTENYSLEKLQKLKDMGIHLCIDDFGVGYSCL 541 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 RL+ L + +KID F++ + + V++I LA + + VVAE +ET+ Q L Sbjct: 542 NRLQELPVNTLKIDRSFLQKLNQCNPNLQFVKAILMLASSLEIEVVAEGIETKTQLQYLQ 601 Query: 710 KLGVQYLQGYLIGRPQ 725 +LG QGYL +P Sbjct: 602 ELGCLLGQGYLFSKPI 617 >UniRef50_A4BNI1 Putative signal transducer protein with histidine kinase domain n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNI1_9GAMM Length = 654 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 85/445 (19%), Positives = 170/445 (38%), Gaps = 17/445 (3%) Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSF 352 LL +VR + A DPLT LPN +Q + Sbjct: 197 RQGTLLGVVRDIRERKAAETHLGYAANYDPLTALPNRSLFRDRLDQVLADASWQRRQIAL 256 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---- 408 + +DN + ++ G ++ I + L + ++ L ++ G + L+ + Sbjct: 257 HLIDLDNFKLINEGLGHAQGDQVLQRIAQRLGAAVHRSDTLARVGGDKFALIQTSLHRVE 316 Query: 409 ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 ++ R QH+++++ L++ + N + L ++ Sbjct: 317 QSAFRAQHLLDVVEPTLTIAGERELNVTASIGIALYPENGLATEELTHNAELALSRAKLE 376 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 A + + + L + + AL + L + QP G + ++ Sbjct: 377 GRN-AYCFFVRGMEEEMRVRCALEHDLGQALTHDEFLFHYQPQVELTTGRVIGCEALIRW 435 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 G++ P +F+ + + L + + L + +VNL + Sbjct: 436 HHPKYGLLYPSRFISMAEESGAIIPLGEWSLREVCRQLKVWQREGLPIGHIAVNLSAVQF 495 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 A + ++ + + P + LE+TE A N E + + QL + G ++AIDDFG Sbjct: 496 RYPEFASLVDQVLRDASVDPACLELEVTESLAMENPELAASLVAQLKRLGVKLAIDDFGA 555 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKR ++KID + ++ TN DA I ++ +L + + V+AE +ET++Q Sbjct: 556 GYSSLGYLKRFPVQMLKIDRSLIDELATNGCDAAITIAVIELGHSLDMHVLAEGIETREQ 615 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L + + QG P + Sbjct: 616 LDFLRRHHCDFGQGTSFAAAMPAGE 640 >UniRef50_Q2SKH9 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKH9_HAHCH Length = 999 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 86/445 (19%), Positives = 165/445 (37%), Gaps = 16/445 (3%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + A D LT L + + Sbjct: 535 VFRPAPEKVSHYVVTCEDITLLKKSKDEMEQLAFYDHLTGLESRLLFKLRLENAITRAVR 594 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 ++ + + ID+ + ++ +YG ++++ + +++N+ + ++ G E ++L Sbjct: 595 DKSMIALMFIDIDHFKEINDNYGHDAGDEVLKTVAARIKQNVRKNDTVARISGDEFTVIL 654 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 S + + + R + +G + L LL Sbjct: 655 SDIRGHVDARRVAQGIRRTLNRPFKFAGKEYIVGASIGISIAPDDGVELDELLKNADTAM 714 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGY 519 Q+ + + ++ + K+ L + L + L QP+ + E G Sbjct: 715 YQAKRNGRND-IQFFSHSMNEEAKKKQTLEAEMIQGLSKKQFRLDYQPVIDLETKKLVGL 773 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVN 578 + +L G++ PD F+PL + L V+ ++ ++N Sbjct: 774 EALLRWNHPSQGVIYPDHFIPLAEETGLIVELGKWVINEVISATRELRKMGFSDVGVAIN 833 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L K + I R+ P + LE+TE E S +I L+K GF I Sbjct: 834 VSARQLRDKGLIADIGRIVAANRNEPCNIQLELTEATIIEELEQSNRSINDLNKLGFGIT 893 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFG GY++ LK+L D IKID FV +++ DA IV+++ +A L+VVA Sbjct: 894 VDDFGAGYSSMSNLKQLPIDCIKIDKSFVHNMLRKGDDAEIVKAMISMAHNLKLNVVAVG 953 Query: 699 VETQQQQALLHKLGVQYLQGYLIGR 723 VE +Q L + QG+ + Sbjct: 954 VEDAEQVKFLKENKCFLAQGFYFSK 978 >UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L613_MAGSM Length = 577 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 84/422 (19%), Positives = 175/422 (41%), Gaps = 23/422 (5%) Query: 329 DPLTLLPNFRALEQAPEQEAGKSF--------CCLRID--NLEFMSRHYGLMMRVHCIRS 378 D LT LP+ E +Q + L +D ++ + G IR Sbjct: 145 DDLTGLPSRILFEDRLQQAISLAVRHKNCVGAMFLGLDTERIKLIRNSLGQTATDELIRE 204 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL----QHMVNILNS---RQIHWNNT 431 + L ++ + + ++ L+L+ + + + + N Sbjct: 205 VAVRLDDCLRTTDSVARIAEDSFALLLTDLNGHKDAVRNSSVVARKVYESLVKPVILNGQ 264 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 +++ F + T + LL + H ++ ++ L Sbjct: 265 PVEVNAAMGITLFPQDGSTPRELLMNAETALNHA-RHRGWNNYQFFSSEMTEAARERFEL 323 Query: 492 LNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +R A+++ +L+LY QP + G + ++ + G+++P +F+P+ + L Sbjct: 324 ETHLRQAIEKNELVLYYQPQVDLHDGTIIGAEALIRWKHPERGLISPAQFIPVAEETGLI 383 Query: 549 ARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 V+ + ++ +A R +NL L ++N+A + L + I P V Sbjct: 384 VPIGEWVMRTAIRQIAIWKELGVTPVRVGINLSALQFKRQNLAALVEELLNEHDIDPSLV 443 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE + ++ ++++ G +++IDDFGTGY++ +L++ +KID FV Sbjct: 444 DLEITESAIMDDVGRAIEMLKRISALGVKLSIDDFGTGYSSLSQLRQFPFQTLKIDRSFV 503 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 D+ ++ D IV +I +A + +V+ E +ET Q ++ +L +QG+L +P P Sbjct: 504 TDL-ESSGDKAIVSAIIAMAHSLEQTVIVEGLETSAQLTIMKELNCNEMQGFLFSKPLPA 562 Query: 728 AD 729 + Sbjct: 563 EE 564 >UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2C5_DESAC Length = 777 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 94/468 (20%), Positives = 184/468 (39%), Gaps = 21/468 (4%) Query: 280 NFLQGVETEYSLA-FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 E + I ++ + R +R + + D LT L N + Sbjct: 292 RLRSAAGHELPVDCRISTAADGGTILHWVVCRDLSTQLENEKRLYNLSNFDQLTGLTNRQ 351 Query: 339 ALEQ----------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 + +Q+ + + D+L+ ++ + +R L ++ Sbjct: 352 EFSEQATNAMRLTKRLQQQMAVALISI--DHLKVINETLTSEVGDSLLREFSVRLSQGVR 409 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFD 445 E + + +L G++ + + + ++ ++ L S+ + + + + A + Sbjct: 410 ETDLVGRLSGNQFAVAFTNIDDIQSIEQVMTKLRKKLSQPMTIGDQEMFVTSSAGLSIYP 469 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 G+ +++ LL + + AH + ++ ++N + AL + +L Sbjct: 470 GDALSVEALLKKANSARYYVRAHGGNK-HQFYAPEMDEDIKNRLEMINGLHNALVRDELQ 528 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L QP N E + +L G ++P F+P+ + + L VL Sbjct: 529 LSYQPKVNLAEGEFHSVEVLLRWSHPTLGQVSPSDFIPMAEESGMIGELTLWVLRQACLQ 588 Query: 563 LATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + R +VN+ L + + L + PQ + +EITE + Sbjct: 589 VHAWQKQGLPPIRVAVNVSGHQLQSSDFITALTDLLNETGLDPQWLEIEITESVLMQSPT 648 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 +++ + +L K G +AIDDFGTGY++ LKR +KID F+KDI + A I Sbjct: 649 AAIATLNKLRKLGIHLAIDDFGTGYSSLAYLKRFPVHSLKIDRSFIKDIEQSERYATITS 708 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 SI ++ K+ L+V+AE VET Q A L + +QG+L P + Sbjct: 709 SIIEMGKSLHLTVIAEGVETLGQMAFLKEQNCDEIQGFLYSMPVNADE 756 >UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=2 Tax=Proteobacteria RepID=B8INP3_METNO Length = 794 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 122/751 (16%), Positives = 241/751 (32%), Gaps = 58/751 (7%) Query: 31 ISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFH---------- 80 I+ + ++H + W+ + G M Sbjct: 29 ITTVGLLHHACRTTRWLRFAWVCVAAVAGGSGIWATHFIAMLAFEPGLPSGYDIGLTVRS 88 Query: 81 LSFLQTAVMLGSQTFVV--LCACAILRWQLGTRWRYGL-----TSRYVWQRLFWLGLVTP 133 L++ LG ++ + A L + + + + R+ W + Sbjct: 89 LAYAVVLTGLGLAVTLLRRIPFTAGLGGLILGSGIAAMHYTGMAAFEIAGRIIWDPTLVA 148 Query: 134 IGIKCSMYLVGSFFDFPLKISTFF----GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 + L G+ L G + + L + L Sbjct: 149 ASLVLGALLGGAALPVALGPHGVRSQTAGALLLLGAICSLHFIAMGALTIVPDPSIAISE 208 Query: 190 IVSPHFAQILWRRDI------------------APSLGKEKRAFTLSWLAALSVLLLLLC 231 P + ++ + +R +L+ A +++ Sbjct: 209 TAVPSRWLAVAVALASGAILLLAGGALALDIRDRRTIVESERLRSLANAAVEGLVVCRDD 268 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + G LV + P A++ + Sbjct: 269 IIVSANDSFGRLVGIAATAVAESSLSRFLPDPATRLALTRQSEQLIETELRGAEGEMIPV 328 Query: 292 AFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 I+ + VR R A D LT L N + Q Sbjct: 329 EVIMRPVTYGRRPHFAVAVRDLRARRQAEGRIQFLAHHDALTGLANRTSFTQRLDLELKL 388 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + CL +D + ++ +G + ++ R + ++ E + + +L G E Sbjct: 389 AEATGRKLAVLCLDLDRFKEVNDLFGHAAGDAMLVNVARVVTGILGETQMMARLGGDEFA 448 Query: 403 LVLSGPETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + L+ + H+ + R + + G + + + LL Sbjct: 449 V-LAACDHAITAGHLAERILEALRSENADAAGPLVATSIGIALYPDDASERDVLLSHADT 507 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 ++ + E + Q + +L + +R A+ +G++ L QP E Sbjct: 508 ALYRAKSEGRG-TYRFFEHKMGVQVRDRRILEHELRHAVARGEMHLVYQPQTQVETGEVI 566 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 G++ +L + G ++P F+P+ + + VL + A+ P +V Sbjct: 567 GFEVLLRWHHPERGAVSPAVFIPIAEESGAILQIGEWVLRQACRDAASWPN---PLAVAV 623 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ + + + + + + + P + +EITE + ++ + Q+ G I Sbjct: 624 NVSAVQIHAPHFVQLVHEVLLQTGLKPDRLEIEITETALIRDPVRALSTLRQVKALGVHI 683 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 A+DDFGTGY++ L+ D IKID F++ + TN A IVRS+ L + L V+AE Sbjct: 684 AMDDFGTGYSSLSNLRSFPFDKIKIDPSFIRAVDTNEQTAAIVRSVLGLGRGLGLPVLAE 743 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET + L QGYL+GRP P+ Sbjct: 744 GVETDAELRFLAAENCDAAQGYLMGRPAPIE 774 >UniRef50_Q2N9U4 Sensory box/GGDEF family protein n=5 Tax=Sphingomonadales RepID=Q2N9U4_ERYLH Length = 740 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 87/488 (17%), Positives = 179/488 (36%), Gaps = 23/488 (4%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSE 316 P L A +T+ L + + + + + + + + Sbjct: 98 RPLPFLLRARNTISDLPVRISIGESDDRKIWWSISGKPQLDGNGDLLGYRGSAKDITAVR 157 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYG 368 A D LT L N + + + + L +D + ++ G Sbjct: 158 QNQLEVGRMAQYDSLTGLANRHRMTKRLTTTLTAYKAAKRSCALMMLDLDRFKQVNDTLG 217 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 ++ + + L ++ N ++ +L G E ++L E GRL + + S+ Sbjct: 218 HPAGDELLKQVGQRLERIIGGNGEIGRLGGDEFQVILPDIEDRGRLGEVAARVIQMISQP 277 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + +G + + L+G + + Sbjct: 278 YSIDGARAIIGTSVGIAIAPYDGIDTEELVGAADLALYAAKGGGRGQ-YRFYSSELKDGA 336 Query: 486 TKQVLLLNTIRTALDQGD-LLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPL 541 + + +R AL L ++ QP+ + + ++ ++ + G ++P F+P+ Sbjct: 337 RHRREIEEDLRDALSMDQGLEMHYQPLVDAKTHRVKCFEALIRWNHPERGWISPGDFIPV 396 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 N VL + ++ P +VN+ + N+ + + K Sbjct: 397 AEDTNQIGDLGEWVLRRVCTDASSWPG---DISVAVNVSAVQFGDPNLPQIVCKALKDSG 453 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + LE+TE + ++ L K G +A+DDFGTGY++ LK D IK Sbjct: 454 LDPRRLELELTESVFIGDPNATHDMFVALKKLGVALALDDFGTGYSSLGYLKNAPFDKIK 513 Query: 662 IDGVFVKD-IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 ID FV+ + ++ I+ +I LA A +++ VAE VE + L+ + G Y+QG++ Sbjct: 514 IDQSFVRGSTENDNNNSAIITAIVSLAGALNMTTVAEGVEAMDELELVRERGATYIQGFI 573 Query: 721 IGRPQPLA 728 + P Sbjct: 574 FSKAIPQD 581 >UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=A7HQX0_PARL1 Length = 991 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 121/741 (16%), Positives = 245/741 (33%), Gaps = 51/741 (6%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIF-GWRGVVPVLCGM 71 IF+L+ +V ++ + A+ FL L+++ + G+ + + Sbjct: 267 IFSLSPWWDLVFRTIALALFGSAVFMLERFFLESERHSATLAMVSRWLGYAVLAGIPLAF 326 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + ++ +L VV+ L Q L + Sbjct: 327 LTASGAALYVRLFLAVALLAGAPLVVMA---------------ALRGVRPAQLLIPGAAL 371 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 I S + + + F G + + R Sbjct: 372 FAIAGFFSAFHAAGWVPGTFAGTVFAGGIFTTALTLFAFAAAYHAQGG--------RRRA 423 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLS----WLAALSVLLLLLCTPYENDFIAGYLVPVF 247 + R A S + + SV +L D Sbjct: 424 DIGTLRSEQRHAFALSGARMGVWDWDIAGDKLYVSPSVEAMLGLDAGTLDGNEVAWREHM 483 Query: 248 FIIFTLGVGKLRYP-FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 T + + + ++ + V A +A +++ + Sbjct: 484 HPADRETYRNALNAYIERGTVSFTLDFRMRHSDGVFRWVALN---ASCVAGPENYATRCI 540 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRI 357 VR + R ++ D LT LPN + + + + Sbjct: 541 GTVRDISAQKHAEERLMHDSVHDSLTGLPNRALFMDRMSRAIRRRGLLERPRAALLLIDL 600 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL--- 414 D + ++ G + +I R L L+ +++ + ++ G ++L+ Sbjct: 601 DRFKTVNDSLGHSGGDALLIAIARRLESLVTQDDTVARIDGDAFAVLLTTRTEREDALAF 660 Query: 415 QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + I + + E + L + ++ + Sbjct: 661 AEQASEFLRQPIEVAGHEVYPTCSVGVAICEDAHEHPEELFTEAEIAMYRAKRSGKAR-I 719 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 + E + +T + L +R A+++ ++ LY QPI + G++ ++ G Sbjct: 720 ELFEPGMRSETDDHLTLETDLRHAIERREMELYYQPIMSLTDGGVRGFEALIRWNHPKEG 779 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKN 588 ++ PD F+PL + + L + + LAT SVN+ LL+ + Sbjct: 780 LLAPDNFVPLAEELGVITEIGRFALRAASEELATWQKLFPMERALTVSVNVSSRQLLRHD 839 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + R+ R I + LE+TE N E + + ++ G +++DDFGTGY++ Sbjct: 840 LIDDVKRVLNRIDIERGTLKLEVTESLVMENPEFAASMLTRIKALGAGLSLDDFGTGYSS 899 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+R D +K+D FV + + +I+RS+ LA + VVAE E++ Q L Sbjct: 900 LSYLQRFPFDTLKVDRSFVAGMSVDRETPLIIRSMVTLAHDLGMEVVAEGTESESQARDL 959 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +G Y QGY G+P A+ Sbjct: 960 ADMGCDYGQGYYFGQPMRAAE 980 >UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3Y1_LEPCP Length = 730 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 99/487 (20%), Positives = 179/487 (36%), Gaps = 30/487 (6%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 + P + + + E + + ++ Sbjct: 225 IAKPLRSAVTLAGHISAGRIDTPLPPAASDEVGVLTQAMDDMRQNLA------------R 272 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGL 369 R A D LT L N Q S L +D + ++ G Sbjct: 273 REARIAELAYRDDLTGLANRTLFNDRLDQALASARRQGNALSVLVLDLDRFKQVNDVLGH 332 Query: 370 MMRVHCIRSICRTLLPLM-QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + ++ + L + + + + +L G E ++L + + L S Sbjct: 333 TLGDQVLKEVGERLRNALMRTTDTVARLAGDEFAVLLP-TQDHAAATALGRRLLSVLESP 391 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + +D+ D + L+ + ++ + L + E + Sbjct: 392 VPVQGQRVDVSASIGIACADDAGLSAAQLMARADIAMHEAKQGNRGLLV--FEAAMERHV 449 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 + LL+ +R A DQ + L QP + + + ++ GI+ PD+F+P Sbjct: 450 EHGLTLLSDLRRAADQHEFFLLYQPKLRLSDGHCDAAEVLIRWRHPQRGIVPPDRFIPFA 509 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 Q L VL+ L LA+ ++N+ L Q + + +R + Sbjct: 510 EQTGAIKAITLWVLQHALNQLASWQQLGWQLSLNINVSTRDLGQPDFPALVDNALRRAGV 569 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + ++ LE+TE + ++ ++ L++ G R++IDDFGTGY++ LK+L +KI Sbjct: 570 AAASLCLEVTESAIMDDPAQALRCLQALNEMGVRLSIDDFGTGYSSLAYLKKLPVQELKI 629 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV + + D IVRS DLA L+VVAE +ET+ L G QGYL Sbjct: 630 DRSFVSGLDRDEADVTIVRSTIDLAHHMGLAVVAEGIETEAVSQRLRSFGCDQAQGYLYS 689 Query: 723 RPQPLAD 729 RP P + Sbjct: 690 RPLPAME 696 >UniRef50_Q7CVL6 GGDEF family protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CVL6_AGRT5 Length = 724 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 88/464 (18%), Positives = 179/464 (38%), Gaps = 27/464 (5%) Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 E + FI A + + + A D LT LPN R Sbjct: 252 RLAGRKPDEALVEFIGAAARMAGLAI--------DRKRAAEHIAFLADHDMLTRLPNRRF 303 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + L +DN + ++ G + + + + +N+ Sbjct: 304 LDTRLPEILAAAAKANRRVGIGFLDLDNFKQINDTLGHSIGDALLSKTAERIAASLGQND 363 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ G E +++L E + ++ + + S+ + N + + F + Sbjct: 364 LVLRVGGDEFVIILE--EHKDDVEKHLQRIRAAVSQPLRIRNYDIKVTCSIGMAFFPEHG 421 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 +T ++ + + ++ + ++ K+ + +R A+++ + +L+ Sbjct: 422 KTTAEIVAAADLAMYEVKHNGRD-SIATFTPNMADDLRKKFTRIEEMRKAVERDEFVLHF 480 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ G++ P +F+ L + L +L+ + Sbjct: 481 QPQVDLANGRISGVEALVRWQHPTEGLLGPVEFIGLAEETGLIVELGANILKKACRQAQA 540 Query: 566 HPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VN+ P Q + +I + K ++P + +EITE + E+S+ Sbjct: 541 WVAAGLSPVKMAVNISPRQF-QGGLVQQIRSVLKETGLAPSLLEIEITETLIIQDVETSV 599 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + + + G +A+DDFG GY+ LK +KID F+ + T D+ IV + Sbjct: 600 RIMHAIKQMGVSLALDDFGIGYSCLGMLKTFPLSCMKIDRSFLTHLPEKTKDSAIVTIMI 659 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + + V+AE VET +Q L G Y QGY RP P Sbjct: 660 QLAGSLGIDVIAEGVETAEQANFLRTAGCPYGQGYYFSRPLPAD 703 >UniRef50_B7KEZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=3 Tax=Cyanothece RepID=B7KEZ6_CYAP7 Length = 589 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 95/441 (21%), Positives = 177/441 (40%), Gaps = 29/441 (6%) Query: 317 WLNRRWHLQALTDPLTLLPN----FRALEQAPEQ----------------EAGKSFCCLR 356 + DPLT LPN Q L Sbjct: 135 QTQEQLDYLLHHDPLTSLPNQLSLREIFNTIISQINISLSLSENSNSENPSQFIPILTLG 194 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D ++ +G + ++ + L + L +L G E ++L + + + + Sbjct: 195 LDRFRRINESFGYNLGDLVLKIAAQYLSQCINNQGSLARLNGDEFAILLKATQDKEIVAN 254 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 L S+ + N + + + + TL+ LL + + +++ Sbjct: 255 YAQKLLKLFSQPLLINEQEIFLSLSIGISFYPEDGSTLETLLQKANSAMKRAKYLGGDR- 313 Query: 474 LDSREEMVSGQ-TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + + + + L +R AL++ +L ++ QP + E G + + Sbjct: 314 YEFYPKCYQKIPSPDYLELEADLRHALERNELEVHYQPRLSLSSGEIVGAEALTRWYHPR 373 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G+++P F+P+ + L VL + + G R +VNL Q N Sbjct: 374 RGLVSPGIFIPIAEETGLIEPIGEWVLRTACEQSKIWQEKGLGLIRVAVNLSGRQFNQLN 433 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++ + ++ + I+ + LE+TE NA S+ + L G +IAIDDFGTGY++ Sbjct: 434 LSQWVAKILRETKINSHLLELELTESILVENASESIQKLNDLKTLGVKIAIDDFGTGYSS 493 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L++ DI+KID FV++I N+ +A I ++I LA L+VVAE +ET+ + + L Sbjct: 494 LSYLQQFPFDILKIDRCFVRNIDQNSKNAAITQAIIFLAHQLGLTVVAEGIETKSELSFL 553 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +QGYL R ++ Sbjct: 554 QNHQCDEMQGYLFSRSVKASE 574 >UniRef50_A5FVW4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FVW4_ACICJ Length = 1114 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 93/453 (20%), Positives = 171/453 (37%), Gaps = 21/453 (4%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------E 347 V ++ + + + A DPLT LPN R L + + Sbjct: 646 RDAAGNPVGIVGVWIDITERREAEEQIYRLAHIDPLTELPNRRLLNERLREVLIEARRTG 705 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +D + ++ G +R + L ++ + + ++ G E +++++ Sbjct: 706 VQGALLFIDLDRFKTINDMLGHSAGDSALRQAAQRLRQAVRAADTIARVGGDEFVVLIAD 765 Query: 408 P---------ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 + M++ L +R I +G + F +T+ L+ + Sbjct: 766 AGSTVADAADHAATIARKMIDALTARPISIGEREYHLGASIGFTMFPKPDDTIDTLIREA 825 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEG 516 Q+ A + + + + + + + IR+AL G ++ Q + Sbjct: 826 DTAMYQAKAGEADVVM--FRQSMHLSIVARHAIEDEIRSALKAGRFEIWLQDQVELGGKP 883 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G + +L DG I P +F+ + L +L LA D+ R S Sbjct: 884 VGAEVLLRLRDRDGRIAVPSEFIGIAESSGLIVPLGRWLLREACALLARAHRDRPDWRLS 943 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ P +I + + LEITE + + L G R Sbjct: 944 VNVSPRQFRDPAFVTDVIAALDISGVPADRLTLEITENLLIRDTFEIARIMGILADRGVR 1003 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++DDFGTGY++ L++L IKID F+ + + IV +I +A+ L VVA Sbjct: 1004 FSVDDFGTGYSSLHYLRQLPIHEIKIDRGFIGQVPDDASSVAIVEAILAMARRLDLDVVA 1063 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET + A L G +QGY P P+++ Sbjct: 1064 EGVETPEHVAFLKARGCPRMQGYFFACPIPVSE 1096 >UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1N8_SHEAM Length = 817 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 107/452 (23%), Positives = 183/452 (40%), Gaps = 23/452 (5%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---EQE------AG 349 ++ R + QA D LT L N RA+ A +Q Sbjct: 351 DGRPARVIGSQRDVSEDMRNQQAIAHQANHDSLTNLANRRAVMDALFEFQQAGPGSMLRL 410 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP- 408 + + +DN + ++ G + L N + +L G E +++ Sbjct: 411 GALLLIDLDNFKLVNDALGHHHGDRLLIQAAARLSGFFSGNALVARLGGDEFAIMVLDLA 470 Query: 409 -ETEGRLQHMVNI------LNSRQIHWNNTGLDMGYGAAWGRFD-GNQETLQPLLGQLSW 460 +TE + + +R ++ +++ FD + LL Sbjct: 471 TDTEQAAHQAMQLGAELKQQIARSFQLSDQQINVTASVGVCLFDNHHPVEPAQLLKHADM 530 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEG 518 + + + + T+ + L N +R A+++ L L QPI + E Sbjct: 531 AMYAAKDGGRNGC-ALYSDELEDKATENLWLQNELRHAIEREQLSLVFQPIFNHDGELVC 589 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSV 577 + + + G ++P +F+P+ L VL + + L +V Sbjct: 590 CEALCRWHHPERGPISPAQFIPVAEDSGLIIGIGQWVLLEVCRTLKAMSEKGTPMPAVAV 649 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ Q + R++ L K + +SP + LE+TE SN + +++L GF I Sbjct: 650 NISARHFNQIDFVERLLALLKAHQVSPAQIELELTEYALLSNLNAISERMQRLRSAGFSI 709 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTGY++ L+ L +K+D FV I T + IVR+I D+A + L VVAE Sbjct: 710 AIDDFGTGYSSLSYLQSLPLSRLKLDAAFVGRIGTEAGN-AIVRAIVDMAHSLMLKVVAE 768 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET+ QQA L L + QGYL+G+P P ++ Sbjct: 769 GVETEAQQAYLSSLECDFFQGYLLGKPMPASE 800 >UniRef50_Q7UUK0 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UUK0_RHOBA Length = 739 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 94/459 (20%), Positives = 184/459 (40%), Gaps = 36/459 (7%) Query: 295 LAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------ 346 LAV S + + D LT LPN ++ Sbjct: 281 LAVKDSHGTAYRIAGSLTDITEGKVA----------DALTGLPNRMLFNDRVQRCVDHQA 330 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE-KLYQLPGSELL 402 + + + +D+ + ++ H+G + SI L +++++ + ++ G E Sbjct: 331 RNPQNRFAVIFMDVDDFKLVNDHFGHDAGDDFLVSIASRLDTSLRKSDAIIARMGGDEFA 390 Query: 403 LVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE------TLQP 453 ++L + L+ + + + + + E T + Sbjct: 391 VLLENIRHVDEAVAVAMRLHDKMRAPFPVGDREILTRASMGIVVSEFDPESSVPQATGEE 450 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 LL + + + L + + + ++ L + +R +L++ +L L QP+ Sbjct: 451 LLVRADTAMYFAK-NQSELPYAIFNDDMLAENMLRLELGSQLRHSLERDELALLYQPMVQ 509 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD- 569 + + G++ +L + G ++P+ F+P+ L VL + + Sbjct: 510 LCDGKTAGFEALLRWEHPEHGTVSPNTFIPIAESNGLIIEIGKWVLRKACQQAMQWQEEF 569 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + SVN+ L + + + P+ + LE+TE + ES++ + Q Sbjct: 570 GRPIMISVNVSVRQLSSTGFVEAVTETLEETKLQPECLKLEVTESFLMQDPESTIELLHQ 629 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G I IDDFGTGY++ L R+ DI+K+D FV+ + + +A ++RSI LAK+ Sbjct: 630 LRRIGLTIGIDDFGTGYSSLSYLHRMPLDILKVDRSFVESMFDSEKNASLIRSILALAKS 689 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+VVAE VET Q L LG ++QG+ +P Sbjct: 690 LELNVVAEGVETLAQLQRLQDLGCHFVQGFYFSQPVKPE 728 >UniRef50_Q2NCL2 Sensory box/GGDEF family protein n=2 Tax=Erythrobacter RepID=Q2NCL2_ERYLH Length = 783 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 113/705 (16%), Positives = 237/705 (33%), Gaps = 38/705 (5%) Query: 53 LSILFIFGWRGVVPVLCGMFCTNLWNFHL----SFLQTAVMLGSQTFVVLCACAILRWQL 108 L+ L + GW + + +F + W + Q + ++ + L Sbjct: 68 LAWLTVLGWAIGLALTLSIFTSQDWLLRKADGRTLSQREAFRHASGSALVAIAWAAQPVL 127 Query: 109 GTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY----LVGSFFDFPLKISTFFGDADAIF 164 W YG + + L + + + + ++ I F Sbjct: 128 H--WLYGTPTSMLQAWLIVMVVTLGSSLALAAAPLGAIIYIATTSMTAIVVFGLAGQYPP 185 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRM------IVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 V LL + + R + + L R+ + Sbjct: 186 AVAALLYMLVILWGVYQRAEAFLRQSAAEAGMNERNEVVSLLLREFEENEADWLWQIDTQ 245 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 E G G+ +L + + Sbjct: 246 RKVRSVSPRFAFALGLEPGEADGMPFLQLIAGDAWKTGQFPTSLHDLAERLKRKESFSNL 305 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + ++ + + + + A D LT LP Sbjct: 306 LVKVSIDGVTRWWELSGTPMLDEEGKYVGYRGVGSDVTEQRESSEKIAYLARYDTLTELP 365 Query: 336 NFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N A++ A + + +F + +D + ++ G + + L ++ Sbjct: 366 NRLMVNESLGEAMKYAKQWRSRCAFMMIDLDRFKAVNDSLGHQTGDELLAEVSGRLKSIL 425 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 ENE +L G E +V+ + + + + S+ N+ L +G Sbjct: 426 SENEMCGRLGGDEFAIVIRDVKDRDYVDTVARRVIEHLSQPYEVNHHMLYVGASVGSAIA 485 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + +++ L+ ++ E + ++ L ++R ALD+ + Sbjct: 486 PRDGRSVEELMRNADLALYRAKDLGGGEHFQ-YEPSLHKSAEERRQLEFSLRMALDRQEF 544 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP+ + ++ +L + G ++P KF+PL L VLE Sbjct: 545 ELAYQPVVDANDETIISFEALLRWNSAEHGFVSPAKFIPLAEDTRLIVPIGSWVLEQACI 604 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 A P + +VN+ P L++ + ++R + + LE+TE +A Sbjct: 605 EAANWPD---PVKVNVNVSPEQLVEPDFVATVVRALSTSGLPANRLELEVTESIFVRDAL 661 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT-NTLDAMIV 680 + ++++ G ++A+DDFGTGY++ L++L IK+D +FV+ + I+ Sbjct: 662 VAGKALKEVMHLGCQVALDDFGTGYSSLGYLRQLSFSTIKVDRMFVQGAAQGSKESLAII 721 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 R++ +A + ++ AE VE+ ++ L+ +LG +QGY GRP Sbjct: 722 RAVVAMADSLDMTTTAEGVESFEEAELIRELGCTKIQGYYFGRPM 766 >UniRef50_A6Q7D0 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q7D0_SULNB Length = 635 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 123/605 (20%), Positives = 230/605 (38%), Gaps = 37/605 (6%) Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 V + + Y++G + + + ++ L+SL+ A + + L ++ Sbjct: 36 VFLMIMTLMYYILGDYTNTMAHGTG---------VLLTLISLYLARKVGKNNYAKLVYVM 86 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 ++ ++P++ + LA+ VL + L F Y+V + I+ Sbjct: 87 TVFFLLLTMYAYYLSPTMDPVSAWIIIQILASFLVLNIRLGILITIVFST-YVVMMNSIL 145 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 + + + AV + ++ + FL+ T + L L + + Sbjct: 146 GYNSLEFILLKISPVIIAVGLVAMI--EKKFLR---TIFLLEESNKNLEER---VKARTK 197 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEF 362 + R+ QA D LT +PN + + + +D + Sbjct: 198 DIEEEK---RKLDYQAHYDFLTDIPNRNKFYSEIQQWIQKDTAHTLQFALMFIDLDRFKR 254 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + ++ I R + + + ++ G E ++ E + ++ M L Sbjct: 255 VNDSLGHDVGDNVLKVISRRIQKNIPKKAFFSRISGDEFTILFPHGEDKHEVKAMAKRLI 314 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + I N + + N L+ ++ ++ Sbjct: 315 AVIEEPITLQNHTFYLSASIGISCYPQNSIYYADLIKYADTTMFEAKKVGRG-TYKFYDK 373 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 ++ + VL+ + I A LLY QP + G + ++ G + PD Sbjct: 374 EMTHHINEVVLMDSDIHAAFASDTFLLYYQPQIDTRTNAIVGLEALVRWDHPTLGFIYPD 433 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIR 595 F+P + + D +L+ +K + T PR S N L QK I Sbjct: 434 AFIPYAEETGVIIALDYFILQKGMKQIVTWKEQGLKIPRISFNFSTKHLQQKGFVEFIET 493 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 L Q + LEITE N + ++ ++ L G IAIDDFGTGY++ LKRL Sbjct: 494 LLAETRCKGQWIELEITESHIMENIDEAIRVLQALKDLGITIAIDDFGTGYSSLTYLKRL 553 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 AD +KID F++ I N+++ I +I + + L V+AE VET Q+ L K G Y Sbjct: 554 PADKLKIDKSFIEQIPNNSVEMTITNAIIHIGNSLGLQVIAEGVETSLQEIYLTKQGCHY 613 Query: 716 LQGYL 720 +QGYL Sbjct: 614 IQGYL 618 >UniRef50_UPI000185131B diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI000185131B Length = 410 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 83/394 (21%), Positives = 160/394 (40%), Gaps = 13/394 (3%) Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN----EKLYQLPGSELL 402 + + + +D ++++ G + + L ++++ K+Y+L G E Sbjct: 17 DQRVAVMIIDLDRFKYINDTLGHDYGDSLLVQVAERLQQFLEKSLLLYSKVYRLGGDEFT 76 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L+ TE + + L + +N + + E L+ L+ Sbjct: 77 LLHLRCSTEK-AEQIAKRLVTAFNESFILHNQEFYITPSIGISVYLEQGEDLKTLMRNAD 135 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 + + +++++ +R AL++ +L LY QPI + Sbjct: 136 TAMYYVKDREKN-NYQLFTKDMHQHFYRKMVIEKELRGALEREELELYYQPIVRVETGDI 194 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRF 575 G + +L + G ++P +F+P+ + L V+ + + + Sbjct: 195 VGVESLLRWHHAELGTISPAEFIPVSEETGLILPLGEWVIREAARQCKSWQEQGHPPVKM 254 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +N+ LL K+ + RL + + P + LE+TE A + + + L G Sbjct: 255 GINISVRQLLDKHFVDNVKRLLEEADLEPSLIDLEVTESIAMFDQKVMSDRLHTLKALGV 314 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +++DDFGTGY++ L + D +KID F+++I + + IV SI +AK L V Sbjct: 315 TLSMDDFGTGYSSLSYLTKYPLDTLKIDRSFIQNIEQDENNQAIVASILSMAKHLRLEVT 374 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VET++ A L QGY IG P P + Sbjct: 375 AEGVETEEDYAYLKAANCDKAQGYRIGYPVPARE 408 >UniRef50_Q2BRD7 Two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRD7_9GAMM Length = 709 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 151/698 (21%), Positives = 281/698 (40%), Gaps = 50/698 (7%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 V + G+ T+ F+ S+ T Q V+ A + L + G S V+ Sbjct: 16 VAILALGILATSSLAFYFSYQDTLAGKKDQIRSVVQATSSQVIALRSEKAAGNISENVYN 75 Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 L+ + S Y+ D + + + + F + +L SL M+ Sbjct: 76 NRLR-NLINDVSYGHSGYIYLMTQDLRVHLHPKRPELEG-FLISELPSLSHP----QMMI 129 Query: 184 YYLTRMIVSP---HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 ++I SP HF ++ W + PS G T + L S L+L Y +D + Sbjct: 130 DGFKQVISSPSGSHFWELYWPK---PSGGPSVAKLTYAELIPESNLILGTGI-YIDDLVP 185 Query: 241 GYLVPVFFIIFTLGV-------------GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 Y+ F + V + P +L+ ++ + + +Q L E Sbjct: 186 LYIQRAFSYLIITIVVLCAALLTAALISRNIVRPIASLSKQMNDVAHDDIDQEILY-TEQ 244 Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ- 346 + + + L F L+ R ++ DP+T L N RA+ +A E+ Sbjct: 245 QDEIGSMARALEHFREHLIENKR----LRYMQEHVQFLENFDPVTRLYNRRAMGEALERE 300 Query: 347 -------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + F +R+D L ++ G R + L + N L +L Sbjct: 301 VIRNFESQEHVYFLFIRLDLLRNLTIELGDEQRDQILIETANRLRQRLSVNHSLGRLSEG 360 Query: 400 ELLLVL----SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 L++ + + +++ L + I ++ + + F + + L+ Sbjct: 361 CFGLMIIDKPDDVDLDSLTTELLHTL-EQPIQLDSIQIQIAARIGITSFPEDGDQQFELI 419 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE 515 G+ A+ + ++ Q +++ L + A++Q L QP+ + E Sbjct: 420 GRAEIAAKTAKKREQGWLY--FNQIRDTQVKQKMELWQDLSIAMEQDQFYLVFQPLFDLE 477 Query: 516 GE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKK 571 + +L + G ++P F+PL Q L +R D VL ++ + + Sbjct: 478 SNTPLSAETLLRWTHPEHGPISPATFVPLAEQSGLISRLDHWVLNAVARQCRLWLDNELT 537 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 PR ++NL ++ L+ + R+ FK +++ + LE+TE + ++++ Sbjct: 538 LPRIAINLSGISFLRNDFEQRLTNTFKAHNVPLHHIELELTEGVLIEDLARIQEKLQRVR 597 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G ++IDDFGTGY++ R+K L D IKID F+ DI N D IV++I +A+ Sbjct: 598 DMGISVSIDDFGTGYSSLSRIKNLPVDHIKIDKSFIDDIDKNPQDLKIVQAIILMAQGLQ 657 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VET++Q ++L + +QGYL+ RP + D Sbjct: 658 LKVVAEGVETEKQLSILREEHCDVVQGYLLSRPLSVED 695 >UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QP03_9BACI Length = 802 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 106/536 (19%), Positives = 203/536 (37%), Gaps = 17/536 (3%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + E+ + +++ + + +V I F G + Sbjct: 258 QVREQLQQSEELYRKVIEFLPDPIIIQADGVIHYMNPAGLEMVKAERIDFVKGKRLSDFL 317 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 + L G + E + + S L ++R + ++ Sbjct: 318 EKREQQENEWVLTS------LCGEQKEVDVKAMSIDYYGQSAQFL-IIRDLSEQKSKEKK 370 Query: 322 WHLQALTDPLTLLPNFRALEQAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DP+T+LPN L + ++ + + ++ +F++ G ++ Sbjct: 371 IEFMAQYDPITVLPNRNYLREKLNELLLRDVSIAVLLVDVNRFQFINDFLGHSNGDELLK 430 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR--LQHMVNILNSRQIHWNNTGLDM 435 + R L + E L ++ E +V + + E L ++ L + L++ Sbjct: 431 EVARRLKKIQSEQVFLSRIGDDEFAVVYTYNKKEEVNWLLKKLDRLLNEPYFIAGEKLNV 490 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 +++ LL + + + + + K++ L N + Sbjct: 491 TINIGVSYAHDADRSVETLLSNAGKAVYYAKTNGVHRVVQ-YQSKLHDIFVKRIRLENDL 549 Query: 496 RTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 +TAL+ + LY QP N + + ++ G+++P +F+P+ + N+ R Sbjct: 550 QTALENNEFSLYYQPKVNVQSGTVSVEALIRWKHPQLGMVSPAEFIPIAEETNMIERIGK 609 Query: 554 QVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL+ L T H + +VNL + ++ + + + P + + EIT Sbjct: 610 WVLQQSCDDLKTLHKSGFSALKMAVNLSARQFMDSSLKATVSNILTSADVPPSSFVFEIT 669 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + ++ L + G IAIDDFG Y++ L R D +KID F++D Sbjct: 670 ETTIMKEPNEVIRILQALKEQGIMIAIDDFGVSYSSLNYLNRFPIDAVKIDRSFIRDFHE 729 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 N A IV +I LA +LSV AE VET++Q L + G +QGY RP PL Sbjct: 730 NRKGAEIVEAIISLAHRLNLSVTAEGVETEEQVRFLLEKGCDEMQGYYFSRPVPLE 785 >UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacillus cereus group RepID=Q81HZ8_BACCR Length = 567 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 98/474 (20%), Positives = 200/474 (42%), Gaps = 25/474 (5%) Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH-------LQAL 327 T Y + + ++ + + + R A Sbjct: 88 EIRNRAKDGTYYWVKTTIVPFLNEKGEPYQFIAIRNDISSRKEAEHRLRLSESRYRELAY 147 Query: 328 TDPLTLLPNFRAL----EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 D LT LPN L + + +D + ++ G M+ + + L Sbjct: 148 HDALTSLPNRLQLITTVNELIADKKEFGMIYFDLDRFKLVNDTLGHMIGDLLLSEVASRL 207 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 ++ E + L +L G E ++L+ + + + + S + + Sbjct: 208 HYVLGEKDVLARLGGDEF-VLLTKNHRQDDMSQLATSVLSCFQAPFMLEGHEVYISASLG 266 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + + ++ LL + A + + + +++ + ++ A+ Sbjct: 267 LCSYPQDGQDVETLLKNSDLAMYSAKEQGRNAA-CFFTDELRAKINRRMKVEFALQKAIR 325 Query: 501 QGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 +L + QPI + + + G + ++ + + G ++P +F+P+ + L + VLE Sbjct: 326 DEELDVALQPIIDLKTKRYSGIEALVRCM-TEDGPISPSEFIPVAEESGLIIKLGDWVLE 384 Query: 558 SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + T P ++G + SVNL L+QK + + KR P +ILEITE A Sbjct: 385 KSCRLFKTLPNYQEGLKLSVNLSIQQLMQKRFILSVRSILKRTGFPPNRLILEITESIAV 444 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL-- 675 + + + +++L G IA+DDFGTGY++ LK+L DI+KID F+++ + Sbjct: 445 RHFDYIIATLQELRNMGVLIALDDFGTGYSSLYYLKQLPLDIVKIDRNFIREFHYDHAQP 504 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + IV+S+ ++A + +L+VVAE VET +Q++LL + Y+QG+ +P + + Sbjct: 505 ERTIVKSVIEIAHSLNLAVVAEGVETVEQESLLQSMSCDYVQGFYYAKPLSVGE 558 >UniRef50_A0LAI5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAI5_MAGSM Length = 447 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 93/419 (22%), Positives = 165/419 (39%), Gaps = 20/419 (4%) Query: 328 TDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN + + + + N + ++ G + + Sbjct: 18 YDTLTALPNRNLCRDRLVSDIAAAEAAGLEISIILIELTNFKQINDTLGFQSGDRVLLEV 77 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR------LQHMVNILNSRQIHWNNTGL 433 + L +++ + ++ GSE L+ ++ L S I + + + Sbjct: 78 AKRLADYADKSDTVARMGGSEFALL--RIRENAAMHSGDFCNELLE-LLSIPIEYEDQPV 134 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + F + + L + + + + + Q ++ L + Sbjct: 135 HITASVGVSHFPRHAGDMNALFQKAAIAMAHAKQAGERNSSRIYAPEMETQAQERFALES 194 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 + L++ +L L+ QP + E G + +L + G ++P +F+PL + L Sbjct: 195 RLHQVLERKELALHYQPKVDAFSGEVIGMEALLRWNSPELGTISPVRFIPLAEETELIVP 254 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 L++ K +VNL P L K + + + + P+ + LE Sbjct: 255 MGAWALKTACKQAKKWLDQGHKLTVAVNLSPRQFLDKRLKDTVRQALTDSQLPPERLELE 314 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE A + ++ + L G A+DDFGTGY++ LK L D +K+D FV I Sbjct: 315 ITESCAVGDVTYTVNLLNDLKSLGVTCALDDFGTGYSSLNYLKLLPLDTLKLDRSFVMAI 374 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + DA IVRS+ +A L VV E VET+QQ A L + LQG+LI RP + Sbjct: 375 PEDKNDAAIVRSVIQMAHDLGLKVVTEGVETRQQAAFLKYNQCEILQGFLISRPLDAQE 433 >UniRef50_Q486I4 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q486I4_COLP3 Length = 685 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 99/502 (19%), Positives = 193/502 (38%), Gaps = 23/502 (4%) Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLL 306 +F + + + A++ + ++ + +L + ++ Sbjct: 179 LFYIHADDRQAVIDAVNDAINNDSSYSIKHRVIRPSGEIREVLEKGQVLRDENGKASRII 238 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRID 358 V + A D T LPN + A + + +D Sbjct: 239 GAVLDITELNQSKEKLEKLAHYDEKTQLPNRVLCRKEIEIRISHALLNNKKFAILFIDLD 298 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + + ++ G + + + + LL ++ + L L G E +++ + E +++ V Sbjct: 299 HFKNINDTQGHLAGDEFLHEMSQKLLTIIPKGMFLAILGGDEFIIITDYSDDEEEIKNKV 358 Query: 419 NILNSRQIHW-------NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 L + I N +D+ + + LL Q Sbjct: 359 TRLAKQLILLIPTKKSYENFSIDITASIGIALYPNHGNNFTSLLSSADNAMYQVKNTGRN 418 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKY 528 + + +++ L++ +RT L +G ++ Q ++ + G + ++ + Sbjct: 419 -NYAMYHPDIEQKRLRELQLISDMRTGLKKGQFTVHYQAKQSLKTDELIGCEALIRWQHH 477 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQK 587 G + P +F+ L L VLE ++ K SVN+ L L Sbjct: 478 TLGNIPPLEFISLAESSGLIIPIGKFVLEQSCLFIKQWQAHSDKSLVVSVNVSALQLKDP 537 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++++ IS + LE+TE N E+++ + L + G I+IDDFGTGY+ Sbjct: 538 LFKEEVLQVINSAGISGHNIELELTESLLMENIEATIQTLHDLKEIGVSISIDDFGTGYS 597 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L++L D +KID F+ + ++ D IV + LA L VAE VETQ+Q+++ Sbjct: 598 SLSYLQKLPVDTLKIDKSFIDSLSSSDEDTWIVINTISLASGLKLKTVAEGVETQEQKSI 657 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L LG LQGYL +P P + Sbjct: 658 LADLGCDILQGYLYSKPIPKNE 679 >UniRef50_Q1QHQ7 Diguanylate cyclase/phosphodiesterase n=13 Tax=Bradyrhizobiaceae RepID=Q1QHQ7_NITHX Length = 781 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 84/458 (18%), Positives = 168/458 (36%), Gaps = 23/458 (5%) Query: 286 ETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 E +L++ ++ +L V + A D LT LPN + E Sbjct: 304 ERGRALSWTFQPMVGGGTVVL--VEDITERRKAEAKISHLARFDSLTELPNRLSFRDEIE 361 Query: 346 Q--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + + +D + ++ G + + L +++ ++ + + Sbjct: 362 RLLAIANSESRLSALLFIDLDQFKQINDTLGHPCGDRLLCIVADRLRGMLRPDDFVARFG 421 Query: 398 GSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++ ++ + + + + + +++G T L Sbjct: 422 GDEFVVFQQNIQSAEEAAALSRRVVERLTERYEIDRHLVEIGASIGIAL-TSPGVTADNL 480 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 L Q ++ A ++ + +L +R AL + + L+ QP+ N Sbjct: 481 LKQADMALYRAKAGGRG-TFCFFRNEMAEIVEARRVLELDLRKALAKEEFELFYQPLVNL 539 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + +L G+++P +P+ + L +L T P Sbjct: 540 KSGRITTCEALLRWNHPTRGMVSPIDIIPVAEEIGLIVDLGRWILRKACMECMTWPDA-- 597 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VN Q+++ + + + + +EITE N + + + QL Sbjct: 598 -VSVAVNFSSQQFHQRDVLSEVRYALEVSGLPAHRLEIEITESSLLRNTQWTHDALTQLR 656 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G RI++DDFGTGY++ L +KID F++ I + ++R + L+ Sbjct: 657 SAGVRISLDDFGTGYSSLSYLHNFPLQKVKIDRSFLEGIDADRP-LTLLRGVARLSADLG 715 Query: 692 LSVVAEFVETQQQQALLHKLG-VQYLQGYLIGRPQPLA 728 +SVV E +ET +Q L+ G V QGYL RP A Sbjct: 716 MSVVVEGIETNEQLELISADGTVTEAQGYLFSRPVSAA 753 >UniRef50_B5ZG86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alphaproteobacteria RepID=B5ZG86_GLUDA Length = 974 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 91/440 (20%), Positives = 175/440 (39%), Gaps = 17/440 (3%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 + R A D LT L N +A ++ + Sbjct: 516 DGGWVATYEDITERLRAEARITYLAHHDSLTGLANRAWFTEALDRALTLAASGTQRVAVI 575 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL--VLSGPETE 411 + +D + ++ +G + + ++ + +++++E + +L G E Sbjct: 576 GIDLDKFKEINDQHGHAVGDQVLVTLAARIRDVLEDDELVARLGGDEFAAAKRFDDMAEL 635 Query: 412 GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + S+ I + L + + ET++ L+G ++ Sbjct: 636 NAFIGRLEECLSQPIGVDGFELRPNASIGVSLYPRDAETVEALMGDADLAMYRAKGALRE 695 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKY 528 E + + L+ + A+D L+ Q E G++ +L Sbjct: 696 HV-CFYEAEMDEAARDRRSLVAALWEAVDHHQFHLHFQVQKRVATGEITGFEVLLRWHHP 754 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 + G + P F+PL + VL + A + R +VNL + L + Sbjct: 755 ERGWVAPMDFIPLAEECGAILPIGEWVLRQACREAARWS---RPYRIAVNLSAVQLGEDG 811 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +A + + + ++P + LEITE + + S+ ++++ G I+IDDFG GY++ Sbjct: 812 LADMVRAILEETGLAPSRLELEITETAIIVDKQQSLRTLQRIKALGVSISIDDFGVGYSS 871 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 E L+ D IK+D F+ +I + I+R+I L ++ ++ V+AE VETQ Q +L Sbjct: 872 LETLRTFPFDKIKMDRSFMTEIERSPESKAILRAILALGRSLTIPVLAEGVETQVQLDIL 931 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 H G QGYL+GRP+P+ Sbjct: 932 HAEGCIEAQGYLLGRPKPME 951 >UniRef50_C6CVN0 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVN0_PAESJ Length = 827 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 87/431 (20%), Positives = 176/431 (40%), Gaps = 14/431 (3%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNF----RALEQAPEQEAGKSFCCLRIDNLEFMSR 365 R+ + QA D +T PN R +E + + +D + ++ Sbjct: 385 RMVDFRKEAEHLIQHQATHDLVTGFPNRYGYSRHVETRTGSSGQFALLYIDLDRFKIINE 444 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 M ++ + ++ + ++ ++++ G E +++L G+ + + S Sbjct: 445 TLDYTMGDMLLKQVGNRIVEVTGQSGRVFRFGGDEFVVLLDEISYLGQATAVAARILSVI 504 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 I + E+ L+ + + M+ Sbjct: 505 AEPIKMKGRLFYLTASIGMSVQQEWTPESGDRLVKESDIALYVAKKQ--RNTYKLYSPMM 562 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKF 538 + +K+++L N++ AL+ +L+ QP IR G + +L + G+++P +F Sbjct: 563 NDVPSKELILENSMFEALESNQFMLHYQPKLEIRTGRIYGVEALLRWKHPEFGMVSPLEF 622 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + VL S + + SVN+ L QK+I I + Sbjct: 623 IPIAEKTGFIILLGEWVLRSACRQVKQWEQMGLDSVLVSVNMSMLQFQQKDIVSSIKSII 682 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + P+ + LE+TE N E ++ + +L G ++++DDFGTGY++ L+ + Sbjct: 683 AEAGVRPEQIELELTESIFMENPEHTLRILHELQGLGLKLSLDDFGTGYSSLSYLQNIPI 742 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +K+D F++ IVT+ MI RSI +A ++ VV E VET ++ ++ + +Q Sbjct: 743 HYLKLDKSFIRGIVTDIRKQMIFRSIIVIAHNLNMKVVTEGVETAEELQIIKEHNCDLMQ 802 Query: 718 GYLIGRPQPLA 728 GYL P Sbjct: 803 GYLFSPPVTPE 813 >UniRef50_C9YG65 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YG65_9BURK Length = 823 Score = 541 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 109/582 (18%), Positives = 199/582 (34%), Gaps = 26/582 (4%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 + L L+ + + ++ R +A A + L + Sbjct: 228 VGGLLILALMAVIYAGLHAQKLMKQILEDSRQRVSLAERNRSVLNAVDDAILGIDLNGTV 287 Query: 229 LLCTPYENDFIAGYLVPVF-FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 P ++ + + I L + P L + L+ + Sbjct: 288 TFANPSASNLLLLTSDDILTLEIKDLLPLEYSGPLLASLNSGQRWSSLSST--LIDSNGR 345 Query: 288 EYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + V+ ++ + R ++ + +L+A D LT PN + Sbjct: 346 RFPAEVSCTVVRYNDKIRGGVIGI-RDISERKFFEDQLYLKANFDTLTGAPNRNYFAEYV 404 Query: 345 EQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + S + I+ + ++ G ++ L+ + + + Sbjct: 405 GNCLMVMGSDQSGSLMLVDIEGFKKINDSMGHDTGDLLLKYAYERLVATVGPANMVARFG 464 Query: 398 GSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 E + L G + + + + S + + G F + T L Sbjct: 465 NDEFAVCLGGCKNQAEAAEIAQKVLNAFSESFNVLGHVVWAGASIGISVFPTDGSTPNDL 524 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-- 512 L + ++ + + T + L +R AL Q +L L+ QPI Sbjct: 525 LRRAEMAMYKAKSLGKDE-FSFYSAELDVDTQGRRTLEVDLRRALAQNELELFYQPIVTM 583 Query: 513 -NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + + +L G+++PD F+PL + L + VLE + LA Sbjct: 584 GSAAVSHVEALLRWRDPQKGLISPDTFIPLAEETGLIVEMGVWVLEESCRQLAAWHKAGL 643 Query: 572 GPR--FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 ++N+ + + I RY + V EITE + + + Sbjct: 644 DAHVGVAINVSGRQVPRGLSLACITETLSRYGLDGSQVSFEITESVLLDGSGTVAEWLSG 703 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV---TNTLDAMIVRSITDL 686 + G R+ IDDFGTGY++ LK LQA +KID FV + N D +V +I + Sbjct: 704 VRNLGIRLMIDDFGTGYSSLSYLKHLQAAALKIDKSFVWGVAGESENKEDQSLVLAIISM 763 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A + L V+AE VET +Q L + + QGYL GRP P Sbjct: 764 AHSLGLPVIAEGVETNEQADWLLRNQCDFAQGYLYGRPLPAE 805 >UniRef50_A6EZP7 Two-component response regulator n=4 Tax=Marinobacter RepID=A6EZP7_9ALTE Length = 858 Score = 541 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 100/496 (20%), Positives = 191/496 (38%), Gaps = 18/496 (3%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLY 307 F G + + +N + T + ++ + + Sbjct: 350 FLQGEETALEALETIRQGLHHQTEVNVELINYRKDGTPFWNHLRISPVFGNDGLCTHFIG 409 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNL 360 + + QA D LT LPN + ++ + L +D Sbjct: 410 TQQDVTHQREQEAQITYQATHDLLTGLPNGVSFQETLHDALILDGGRGALAVLYLDLDGF 469 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + +I R L L + +L G E L+L G + + Sbjct: 470 KPINDELGHHVGNQVLITIARRLADLTAPEATVARLVGDEFGLLLPGYTNRKEVTQLAER 529 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + ++ I + + + + LL E++ Sbjct: 530 ILVHLAKPIDVDGQMVHISASIGIACNSAPLDAPHELLQFADIARERAKRQGKN-TWQWH 588 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + + ++ V L + + TAL++ ++ QP+ + + ++ G+++ Sbjct: 589 SGLKAERSQHSVKLRHDLHTALNENQFEIHYQPLVDAVTGRMRSVEALVRWKHPTRGMIS 648 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+PL Q L +L+ +A + +G R +VN+ L ++ + Sbjct: 649 PGEFIPLAEQTGQIIPLGLWILKQACIEIADFNAQRERGLRVAVNISSLQFIRGGFLDDV 708 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 R+ + PQ + LE+TE AE + +E L G R+A+DDFGTG+++ L+ Sbjct: 709 RRVLAETGLPPQLLELEVTESVLLDGAEPVIELMETLKTLGVRVALDDFGTGFSSLSYLR 768 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L +K+D FV+ T+ A IV+ + +A + VVAE +ET++QQ L + Sbjct: 769 DLPTHKVKLDRSFVEKTTTDHRIAAIVQGVITMAHHMDMIVVAEGIETREQQDDLARRHC 828 Query: 714 QYLQGYLIGRPQPLAD 729 LQGYL +P PLAD Sbjct: 829 DILQGYLFAQPMPLAD 844 >UniRef50_B7L1R8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=7 Tax=Rhizobiales RepID=B7L1R8_METC4 Length = 795 Score = 541 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 110/542 (20%), Positives = 210/542 (38%), Gaps = 21/542 (3%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 RD + + R +L+ A +++ T + LV + P Sbjct: 240 RDRRHAKLESDRLRSLANAAVEGLIVCTGDTVVSANRSFAKLVGMPQNALAGTTLSAYLP 299 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNR 320 A+++ + I+ + VR Sbjct: 300 GDAARLALASQLERPVEAELKLADGGMVPVEVIMQPVEYEGRPHYAIAVRDLRARRQAES 359 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMR 372 + A D LT L N + Q +QE + CL +D + ++ +G Sbjct: 360 QIQFLAHHDALTGLANRASFGQRLDQEMRAADAGERKLALLCLDLDRFKEVNDLFGHAAG 419 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS---GPETEGRLQHMVNILNSRQIHWN 429 + S+ R + + + + + +L G E +++ E + ++ L S + Sbjct: 420 DAMLESVARIVTGELDDTQMMARLGGDEFAVLMPCGGPSEAGRLAERILEALRSGRADTG 479 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 + + + LL ++ + E + + ++ Sbjct: 480 GPQ--IATSIGVALYPDDALEQAALLSYADTALYRAKSEGRG-TYRFFEARMGIEVRERR 536 Query: 490 LLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 +L + +R A+ +G++ L QP + G++ +L + G ++P F+P+ + + Sbjct: 537 VLEHDLRHAVARGEMHLVYQPQTDVGTGAVIGFEALLRWKHPERGYVSPAVFIPIAEESD 596 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 + + VL + AT P +VN+ + + + G + + R ++P Sbjct: 597 VILQIGEWVLREACREAATWPQ---PLTIAVNVSAVQIHSTHFVGLVHEVLLRTGLAPHR 653 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + +E+TE S+ ++ + QL G RIA+DDFGTGY++ L+ D IKIDG F Sbjct: 654 LEVEVTETALISDPNRALLTLRQLKALGLRIAMDDFGTGYSSLSNLRSFPFDKIKIDGSF 713 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V+ + +N A IVRS+ L + L V+AE VET+ + L QGYL+GRP P Sbjct: 714 VRSVDSNEQTAAIVRSVLGLGRGLGLPVLAEGVETEAELGFLIAEQCHAAQGYLMGRPSP 773 Query: 727 LA 728 +A Sbjct: 774 IA 775 >UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein (Fragment) n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHA2_9CELL Length = 721 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 92/549 (16%), Positives = 188/549 (34%), Gaps = 21/549 (3%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLL-LLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 R +A + A+ Y + I G + G + Sbjct: 156 RYALAAEAANDGMWDWDLETGAVYYSARWKALLGYRDHEIEGTSHEWLSRVHPADRGAVD 215 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVET-EYSLAFILAVLISFSVCLLYMVRIYHRSEWL 318 + + Y G + A + + L+ + + L Sbjct: 216 RALAHHLDGRDPAMEVEYRLRTADGSYRWMITSALSVRDADGTATRLVGSMTDVTERKQL 275 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGL 369 + A D LT LPN + Q + L +D + ++ G Sbjct: 276 EDQLRHDAHYDLLTGLPNRALFLERLNQSILRTRRHPDYRFAVIFLDLDGFKVVNDSLGH 335 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHW- 428 + + + L ++ + + + G E L++ + L +V L S Sbjct: 336 QVGDELLIEVAARLSSEVRATDTVSRFGGDEFALLVDDVKDVAGLPDVVRRLLSVVSVPV 395 Query: 429 --NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + A +T L ++ A + + + + Sbjct: 396 VLEDRTRTVSAAAGIAVSASGYDTADEYLRDADTAMYRAKAEGPGAVV-LFDTAMHARAM 454 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++ + + + + + + L+ QPI ++ G + ++ G++ P+ FLP+ Sbjct: 455 ARLQMESALDQGIAEDEFELFYQPIVRMDTRQIVGMEALIRWRHPQRGLVAPNDFLPVAE 514 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + + + + G SVNL ++ + RY Sbjct: 515 ATGHTRPIGQWTIGEACRQIREWLDVVPGFEACTVSVNLSNRQFWDPDLRPTLRSALDRY 574 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + +++ E+TE N + ++ + QL + G + +DDFGTG+++ L L + Sbjct: 575 AVPTSSIVFEVTEGVIMDNQDVAVSFLHQLREEGVELHVDDFGTGHSSLSSLHELPVGAL 634 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+ + T+ +V + + L V+AE +ET+++ A L +LG Y QGYL Sbjct: 635 KIDRSFVQRMQTSPRSHELVGLMVTMGTRFGLDVIAEGIETEEEAAALSRLGCPYAQGYL 694 Query: 721 IGRPQPLAD 729 RP P + Sbjct: 695 FSRPLPATE 703 >UniRef50_Q21XF0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21XF0_RHOFD Length = 879 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 90/431 (20%), Positives = 163/431 (37%), Gaps = 24/431 (5%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 R + D LT L N + + + ++ + ++ G Sbjct: 441 EKQERLNYLVYYDVLTGLANRSLFLERVAQAMRSAVRSGDKLALFLIDLERFKNINDSLG 500 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL----NSR 424 +R + L + + L ++ +VL + +G + ++ L Sbjct: 501 RPAGDTLLRLVAEWLTSKVGDANLLARVGADLFAVVLPEVKQDGEVARALDQLMAAFLEH 560 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 N+ + F + L ++ + ++ Sbjct: 561 PFRLNDAVFRISAKVGIALFPYDGADSDTLFKNAESALNKAKTSGER--YLFYTQKMTDM 618 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 ++ L N +R ALD+G+ +L+ QP N + + ++ G++ P +F+P+ Sbjct: 619 AAGKLTLENQLRQALDKGEFVLHYQPKVNLASGKMTSAEALIRWNDPRTGLVPPGRFIPI 678 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + + L L +K R +VN+ PL L + I + Sbjct: 679 LEETGLIHEVGRWALRQAIKDALRWRSAGLAAVRIAVNVSPLQLRHRGFIDEIRQAIS-- 736 Query: 601 HISPQA---VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 I A + LEITE N + S+ ++ + G +AIDDFGTG+++ L +L Sbjct: 737 -IDAHAAAGLELEITESLLMENVQHSITSLHAIRDMGVTLAIDDFGTGFSSLSYLSKLPV 795 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV ++ +V +I LA A L VVAE VET++Q LL L +Q Sbjct: 796 DTLKIDRSFVIEMTDAPESLALVSTIISLAHALKLKVVAEGVETEEQSRLLQVLNCDEIQ 855 Query: 718 GYLIGRPQPLA 728 G+L +P P Sbjct: 856 GFLFSKPVPSD 866 >UniRef50_Q2VZ50 Predicted signal transduction protein containing a membrane domain n=2 Tax=Magnetospirillum RepID=Q2VZ50_MAGSA Length = 893 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 97/463 (20%), Positives = 182/463 (39%), Gaps = 19/463 (4%) Query: 284 GVETEYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 L + ++ ++ S+ +R A DPLT LPN A Sbjct: 408 SDGRRRWLRGQSRPTLRGDGNVVWDGVMLDVTDSKHAEQRLSFLAYFDPLTRLPNRTAFL 467 Query: 342 QA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + + + + +D L ++ G + + + L + N+ + Sbjct: 468 ERFAAAREIAARDQTMLAVVSVGLDRLGIINATMGHSIGDQVLMAAGDLLRAALSSNDVI 527 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWN---NTGLDMGYGAAWGRFDGNQET 450 + G L++++G ++ + L + D+ + + + Sbjct: 528 ARTSGDRFLVLITGLGSKREAMEALERLRASAHATVAAAGQDFDVSAAMGAAVYPRDGDD 587 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + L+ + + L + +S + K + L +R A+DQG+L+ + QP Sbjct: 588 AETLIKNADAALQLAKVQG-PATLQVFTKEISARAAKTLSLQTRLRRAIDQGELIAHYQP 646 Query: 511 IRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + ++ D G+++P F+P+ + L +L + Sbjct: 647 QVDLRNGDVVGMEALVRWNSPDLGMVSPADFIPVAEESGLIDGVCEFMLWECTRQNKQWQ 706 Query: 568 CDK-KGPRFSVNLMPLTLL-QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + +VN+ + + R + + + +E+TE A +A++++ Sbjct: 707 DEGLPPIPVAVNVSGRQFQYARRLLSACERALVDNRLDSRWLEVELTESSAMRDADNAIA 766 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + QL + G +IDDFGTGY++ LKR +KID FV D+ T+ DA IV +I Sbjct: 767 VVNQLKEMGIACSIDDFGTGYSSLSVLKRFPISKLKIDRSFVLDVTTDPNDAAIVDAIIA 826 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AKA L VVAE VE Q+ L LG +QGY RP P Sbjct: 827 MAKALRLKVVAEGVEHQEHLDFLRNLGCDQMQGYFFSRPLPAD 869 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 746 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 741 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 740 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 738 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 737 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 737 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 731 0.0 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 729 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 727 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 726 0.0 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 725 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 723 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 721 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 718 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 718 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 717 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 715 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 713 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 713 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 712 0.0 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 712 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 712 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 712 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 711 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 709 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 709 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 709 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 708 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 708 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 707 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 706 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 706 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 706 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 706 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 706 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 705 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 705 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 703 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 703 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 701 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 701 0.0 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 701 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 701 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 701 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 700 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 699 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 699 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 698 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 698 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 698 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 698 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 697 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 696 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 695 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 694 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 694 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 694 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 693 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 693 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 692 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 691 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 691 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 691 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 690 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 690 0.0 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 690 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 689 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 689 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 688 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 688 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 687 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 686 0.0 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 686 0.0 UniRef50_A0YBW6 Predicted signal transduction protein containing... 686 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 684 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 684 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 683 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 683 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 682 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 682 0.0 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 682 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 682 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 681 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 680 0.0 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 680 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 680 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 678 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 678 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 677 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 677 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 677 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_Q2SG37 Predicted signal transduction protein containing... 677 0.0 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 676 0.0 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 675 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 675 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 675 0.0 UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_B3E9P2 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 674 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 674 0.0 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 674 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 674 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 674 0.0 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 673 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 673 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 673 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 673 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 672 0.0 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 672 0.0 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 672 0.0 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 672 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 672 0.0 UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Ch... 672 0.0 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 672 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 671 0.0 UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 671 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 671 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 670 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 670 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 670 0.0 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 670 0.0 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 670 0.0 UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YK... 669 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 669 0.0 UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya... 669 0.0 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 668 0.0 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 668 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 667 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 667 0.0 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 667 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 667 0.0 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 667 0.0 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 667 0.0 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 667 0.0 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 666 0.0 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 666 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 665 0.0 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 665 0.0 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 665 0.0 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 665 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 664 0.0 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 664 0.0 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 664 0.0 UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 664 0.0 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 664 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 664 0.0 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 663 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 663 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 662 0.0 UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 662 0.0 UniRef50_Q3IEE0 Putative orphan protein; putative conserved doma... 662 0.0 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 661 0.0 UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanoth... 661 0.0 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 661 0.0 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 661 0.0 UniRef50_Q1N453 Predicted signal transduction protein containing... 661 0.0 UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 661 0.0 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 ... 660 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (... 660 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 660 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 660 0.0 UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax... 660 0.0 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 660 0.0 UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 660 0.0 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 659 0.0 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 659 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 659 0.0 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 658 0.0 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 658 0.0 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 658 0.0 UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 658 0.0 UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter... 658 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 658 0.0 UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacte... 658 0.0 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 657 0.0 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 657 0.0 UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas m... 657 0.0 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 657 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 657 0.0 UniRef50_A6CIW9 Sensory box protein/GGDEF domain protein n=1 Tax... 657 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_C4KD26 Response regulator receiver modulated diguanylat... 656 0.0 UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinom... 656 0.0 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_P72843 Regulatory components of sensory transduction sy... 656 0.0 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 656 0.0 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 656 0.0 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 655 0.0 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (... 655 0.0 UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 655 0.0 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 655 0.0 UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylo... 655 0.0 UniRef50_C6X941 Response regulator receiver modulated diguanylat... 654 0.0 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_B4W5F5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 654 0.0 UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_UPI00016AFAA6 predicted signal transduction protein con... 654 0.0 UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum... 654 0.0 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 654 0.0 UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (... 654 0.0 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 653 0.0 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_B8GQW3 Signal transduction protein containing a membran... 653 0.0 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 653 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 653 0.0 UniRef50_A6LW88 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 653 0.0 UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_B8GNC0 Signal transduction protein containing a membran... 653 0.0 UniRef50_A1ATR3 Response regulator receiver modulated diguanylat... 652 0.0 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 652 0.0 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillu... 652 0.0 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudov... 651 0.0 UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 651 0.0 UniRef50_Q2S9L1 Predicted signal transduction protein containing... 651 0.0 UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase wit... 651 0.0 UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Ta... 651 0.0 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 650 0.0 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_B4RTU5 Sensory box protein n=2 Tax=Alteromonadales RepI... 650 0.0 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales b... 650 0.0 UniRef50_Q483V3 Sensory box/GGDEF/EAL domain protein n=5 Tax=Alt... 650 0.0 UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=B... 650 0.0 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 650 0.0 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_C8WTB0 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_Q220B0 Response regulator receiver modulated diguanylat... 649 0.0 UniRef50_A1U2T3 Response regulator receiver modulated diguanylat... 649 0.0 UniRef50_D1B584 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 649 0.0 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica ... 648 0.0 UniRef50_Q5ZVT3 Inner membrane protein PLUS sensory box protein ... 648 0.0 UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/P... 648 0.0 UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_Q3JAB6 Response regulator receiver modulated diguanylat... 648 0.0 UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 648 0.0 UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 T... 648 0.0 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 647 0.0 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 647 0.0 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 647 0.0 UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax... 647 0.0 UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 647 0.0 UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 647 0.0 UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 647 0.0 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 647 0.0 UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillu... 646 0.0 UniRef50_C6BM04 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax... 646 0.0 UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter... 646 0.0 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_C3XA65 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_C4KCC9 Response regulator receiver modulated diguanylat... 645 0.0 UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 645 0.0 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 645 0.0 UniRef50_Q2SPM3 Predicted signal transduction protein containing... 645 0.0 UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 644 0.0 UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_B6R9S7 Response regulator receiver modulated diguanylat... 644 0.0 UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulate... 644 0.0 UniRef50_B0SAR7 Signal transduction protein n=2 Tax=Leptospira b... 644 0.0 UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotole... 644 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 643 0.0 UniRef50_D1REK0 Putative response regulator, PAS/GGDEF/EAL domai... 643 0.0 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q07XP4 Response regulator receiver modulated diguanylat... 643 0.0 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 643 0.0 UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylat... 643 0.0 UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 643 0.0 UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacte... 643 0.0 UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_D1U433 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q2BJI5 Regulatory component of sensory transduction sys... 642 0.0 UniRef50_Q21ZG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_C6N027 Putative uncharacterized protein n=1 Tax=Legione... 642 0.0 UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria ... 642 0.0 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 642 0.0 UniRef50_Q2RTE0 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_Q2VYM7 Predicted signal transduction protein containing... 642 0.0 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 642 0.0 UniRef50_Q1H236 Response regulator receiver modulated diguanylat... 642 0.0 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_C6WYR4 Response regulator receiver modulated diguanylat... 641 0.0 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 641 0.0 UniRef50_A3ESX6 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_B2J301 Response regulator receiver modulated diguanylat... 640 0.0 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 640 0.0 UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 640 0.0 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with respo... 640 0.0 UniRef50_C1SL51 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 640 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 640 0.0 UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_Q2BQ91 Multisensor diguanylate cyclase/phophodiesterase... 639 0.0 UniRef50_C6XE67 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 639 0.0 UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 639 0.0 UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepI... 639 0.0 UniRef50_C6WW34 Response regulator receiver modulated diguanylat... 639 0.0 UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuni... 638 0.0 UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_C1DD31 Predicted signal transduction protein containing... 638 0.0 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 638 0.0 UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Ta... 638 0.0 UniRef50_C0QA93 Signal transduction family protein (GGDEF domain... 638 0.0 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_A3WPN1 Signaling protein with a ligand-binding sensor d... 637 0.0 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 637 0.0 UniRef50_Q21IJ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 637 0.0 UniRef50_D1RFR0 Response regulator/GGDEF domain/EAL domain prote... 637 0.0 UniRef50_Q1JVN0 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 637 0.0 UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 636 0.0 UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF s... 636 e-180 UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi ... 636 e-180 UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitrati... 636 e-180 UniRef50_C6P797 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_A5V028 Response regulator receiver modulated diguanylat... 635 e-180 UniRef50_Q2BRN8 Signal transduction protein containing membrane,... 635 e-180 UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_C6MV72 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 635 e-180 UniRef50_A1WX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Su... 635 e-180 UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 635 e-180 UniRef50_Q2S7Q5 Predicted signal transduction protein containing... 635 e-180 UniRef50_C6BSB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase wit... 634 e-180 UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 634 e-180 UniRef50_Q07VY4 Response regulator receiver modulated diguanylat... 634 e-180 UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 634 e-180 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 634 e-180 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 634 e-180 UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 ... 634 e-180 UniRef50_A0YPT5 Serine/Threonine protein kinase and Signal Trans... 634 e-180 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 634 e-180 UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extra... 634 e-180 UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/P... 634 e-180 UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/P... 634 e-180 UniRef50_Q07ZQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenz... 633 e-180 UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 633 e-180 UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax... 633 e-180 UniRef50_Q2SDR7 Predicted signal transduction protein containing... 633 e-180 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 633 e-180 UniRef50_C4WM42 Diguanylate cyclase (GGDEF) domain-containing pr... 633 e-179 UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF a... 633 e-179 UniRef50_A5UVR9 Response regulator receiver modulated diguanylat... 633 e-179 UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 632 e-179 UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Co... 632 e-179 UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0... 632 e-179 UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 632 e-179 UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/P... 632 e-179 UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/P... 632 e-179 UniRef50_A5IG24 Sensory box protein/GGDEF/EAL domains n=6 Tax=Le... 632 e-179 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 632 e-179 UniRef50_A3JAM8 Response regulator receiver modulated diguanylat... 632 e-179 UniRef50_A8UUX8 Preprotein translocase ATPase subunit n=1 Tax=Hy... 632 e-179 UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 632 e-179 UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 632 e-179 UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas ... 631 e-179 UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='N... 631 e-179 UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseu... 631 e-179 UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Ta... 631 e-179 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain prot... 631 e-179 UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_A6W3H5 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (... 630 e-179 UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 630 e-179 UniRef50_C6X7M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 630 e-179 UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Nep... 630 e-179 UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya... 629 e-179 UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/P... 629 e-178 UniRef50_B3E7H1 Diguanylate cyclase/phosphodiesterase with PAS/P... 629 e-178 UniRef50_C6BS66 Diguanylate cyclase/phosphodiesterase with PAS/P... 629 e-178 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 629 e-178 UniRef50_A1SWE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 629 e-178 UniRef50_A3QBK2 Response regulator receiver modulated diguanylat... 629 e-178 UniRef50_A0YZ09 Putative uncharacterized protein n=1 Tax=Lyngbya... 629 e-178 UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacilla... 628 e-178 UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum s... 628 e-178 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 628 e-178 UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ol... 628 e-178 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 628 e-178 UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/P... 628 e-178 UniRef50_C4XGB8 Putative response regulator receiver protein n=1... 628 e-178 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 628 e-178 UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 628 e-178 UniRef50_A1SBS3 Signal transduction protein containing a membran... 628 e-178 UniRef50_B2UJT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 628 e-178 UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL ... 628 e-178 UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromob... 628 e-178 UniRef50_B0CBA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 628 e-178 UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylo... 627 e-178 UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/P... 627 e-178 UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax... 627 e-178 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 627 e-178 UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 627 e-178 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 627 e-178 UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/P... 627 e-178 UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/P... 627 e-178 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 627 e-178 UniRef50_B9Z392 Response regulator receiver modulated diguanylat... 626 e-178 UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 626 e-177 UniRef50_B3E7G7 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-177 UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 626 e-177 UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-177 UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-177 UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine ... 626 e-177 UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococc... 626 e-177 UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_Q1Q7M3 Similar to ScrC (Sensory box/GGDEF family protei... 625 e-177 UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (... 625 e-177 UniRef50_Q8DHT6 Tll1859 protein n=1 Tax=Thermosynechococcus elon... 625 e-177 UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_A4X020 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 625 e-177 UniRef50_D2UCH8 Hypothetical two-component system sensor protein... 625 e-177 UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodi... 625 e-177 UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_C7MR68 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 624 e-177 UniRef50_B8CTT8 Sensory box/GGDEF/EAL domain protein n=1 Tax=She... 624 e-177 UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 624 e-177 UniRef50_Q1NX89 PAS:GGDEF:EAL:Response regulator receiver n=4 Ta... 624 e-177 UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 624 e-177 UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1... 624 e-177 UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 623 e-177 UniRef50_Q2N9U3 Sensory box/GGDEF family protein n=3 Tax=Sphingo... 623 e-177 UniRef50_UPI0001850D38 diguanylate cyclase/phosphodiesterase wit... 623 e-177 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 623 e-177 UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 623 e-177 UniRef50_Q39XT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_C5BN58 Predicted signal transduction protein, with PAS,... 623 e-177 UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_A8GZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-176 UniRef50_A6CKI1 Sensory box/GGDEF family protein n=1 Tax=Bacillu... 623 e-176 UniRef50_A0YWR3 Putative uncharacterized protein n=1 Tax=Lyngbya... 623 e-176 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 623 e-176 UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 ... 622 e-176 UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_UPI0001C42794 probable signaling protein n=1 Tax=Bacill... 622 e-176 UniRef50_B9Z647 Response regulator receiver modulated diguanylat... 622 e-176 UniRef50_C6E953 Response regulator receiver modulated diguanylat... 622 e-176 UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_Q2W5V0 Predicted signal transduction protein containing... 622 e-176 UniRef50_A4VKH7 Sensory box/GGDEF family protein n=1 Tax=Pseudom... 622 e-176 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 622 e-176 UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 ... 622 e-176 UniRef50_Q5P4J2 Putative uncharacterized protein n=1 Tax=Aromato... 621 e-176 UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfuro... 621 e-176 UniRef50_Q984Y8 Mll7787 protein n=2 Tax=Mesorhizobium RepID=Q984... 621 e-176 UniRef50_D2L6G6 Response regulator receiver modulated diguanylat... 621 e-176 UniRef50_A4BJS0 Predicted signal transduction protein containing... 621 e-176 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 621 e-176 UniRef50_A1TMD5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 621 e-176 UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 621 e-176 UniRef50_B8KPF2 Response regulator receiver modulated diguanylat... 621 e-176 UniRef50_A8URG3 Signal transduction protein containing a membran... 621 e-176 UniRef50_C1I4R6 Diguanylate cyclase/phosphodiesterase domain 2 n... 621 e-176 UniRef50_Q4ZXA9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 620 e-176 UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Di... 620 e-176 UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_B2J1V8 Response regulator receiver modulated diguanylat... 620 e-176 UniRef50_A6X5M4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rh... 620 e-176 UniRef50_A3JAE8 Predicted signal transduction protein containing... 620 e-176 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_Q2NCL2 Sensory box/GGDEF family protein n=2 Tax=Erythro... 620 e-176 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 620 e-176 UniRef50_C4XMU6 GGDEF domain protein n=2 Tax=Desulfovibrio RepID... 620 e-176 UniRef50_A2SCH7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Me... 619 e-175 UniRef50_Q21VJ9 Response regulator receiver modulated diguanylat... 619 e-175 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 619 e-175 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 619 e-175 UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 619 e-175 UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/P... 619 e-175 UniRef50_B3PKS7 Diguanylate cyclase/phosphodiesterase domain 2 (... 618 e-175 UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protei... 618 e-175 UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 618 e-175 UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_C3X4C3 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacill... 618 e-175 UniRef50_Q5P826 Response regulator receiver protein n=1 Tax=Arom... 618 e-175 UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative ... 617 e-175 UniRef50_B3PF41 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 617 e-175 UniRef50_C6P3U3 Response regulator receiver modulated diguanylat... 617 e-175 UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acineto... 617 e-175 UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/P... 616 e-175 UniRef50_Q72EZ6 Sensory box/GGDEF domain/EAL domain protein n=3 ... 616 e-174 UniRef50_C7RB28 Diguanylate cyclase/phosphodiesterase with PAS/P... 616 e-174 UniRef50_A1K633 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 616 e-174 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 615 e-174 UniRef50_Q2G9J7 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_Q2I6K9 Multidomain signal-transduction protein n=1 Tax=... 615 e-174 UniRef50_C4ZNG3 Response regulator receiver modulated diguanylat... 615 e-174 UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 615 e-174 UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_B9ZLS8 Response regulator receiver modulated diguanylat... 615 e-174 UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 615 e-174 UniRef50_C7QU84 Response regulator receiver modulated diguanylat... 615 e-174 UniRef50_C6MGV8 Response regulator receiver modulated diguanylat... 615 e-174 UniRef50_C0GP21 Response regulator receiver modulated diguanylat... 614 e-174 UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Pho... 614 e-174 UniRef50_B8G486 Response regulator receiver modulated diguanylat... 614 e-174 UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythro... 614 e-174 UniRef50_Q0A8D0 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_B6BNN5 Ggef/eal/pas/pac-domain containing protein n=1 T... 614 e-174 UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwell... 614 e-174 UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromob... 613 e-174 UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photoba... 613 e-174 UniRef50_A7BZ46 Diguanylate cyclase/phosphodiesterase n=2 Tax=Be... 613 e-174 UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacill... 613 e-174 UniRef50_B1XK84 Two-component response regulator (ABC transporte... 613 e-174 UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-174 UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-174 UniRef50_Q312J4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 613 e-174 UniRef50_Q1YF74 Possible signaling protein with EAL, GGDEF domai... 613 e-173 UniRef50_B0KTQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_Q3SK35 Putative diguanylate cyclase/phosphodiesterase (... 612 e-173 UniRef50_Q1K260 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_C5T452 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 612 e-173 UniRef50_A4VMP6 Sensory box protein n=1 Tax=Pseudomonas stutzeri... 612 e-173 UniRef50_B7KTR4 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 611 e-173 UniRef50_D1U5D9 Response regulator receiver modulated diguanylat... 611 e-173 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 611 e-173 UniRef50_B1KF16 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_Q7NXK6 Putative uncharacterized protein n=1 Tax=Chromob... 611 e-173 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 611 e-173 UniRef50_C3KQA4 Putative uncharacterized protein n=1 Tax=Rhizobi... 611 e-173 UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_Q0AMK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_Q8DKE8 Tlr0911 protein n=1 Tax=Thermosynechococcus elon... 610 e-173 UniRef50_A6EZP7 Two-component response regulator n=4 Tax=Marinob... 610 e-173 UniRef50_A8FY98 Signal transduction protein containing a membran... 610 e-173 UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=N... 610 e-173 UniRef50_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Ma... 610 e-173 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 610 e-173 UniRef50_C6MQF9 Response regulator receiver modulated diguanylat... 610 e-173 UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_B4VXK2 Cyclic diguanylate phosphodiesterase (EAL) domai... 609 e-172 UniRef50_A3YAL9 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 609 e-172 UniRef50_A6FEH9 Sensory box protein n=1 Tax=Moritella sp. PE36 R... 609 e-172 UniRef50_A0Q1B8 Diguanylate cyclase/phosphodiesterase domain 2 n... 609 e-172 UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 609 e-172 UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_A2SJS2 Sensory box/response regulator n=3 Tax=Bacteria ... 608 e-172 UniRef50_B1WWM4 Putative uncharacterized protein n=2 Tax=Cyanoth... 608 e-172 UniRef50_Q2BJL1 Signal transduction protein containing membrane,... 608 e-172 UniRef50_A4C531 Sensory box protein n=1 Tax=Pseudoalteromonas tu... 607 e-172 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 607 e-172 UniRef50_A6W0I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 607 e-172 UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Ma... 607 e-172 UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/P... 607 e-172 UniRef50_A0YGV9 Putative uncharacterized protein n=1 Tax=marine ... 607 e-172 UniRef50_A1TQ27 Periplasmic sensor diguanylate cyclase/phosphodi... 606 e-172 UniRef50_Q46PR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-172 UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodi... 606 e-172 UniRef50_B8I783 Diguanylate cyclase/phosphodiesterase n=2 Tax=Cl... 606 e-172 UniRef50_Q1K008 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-172 UniRef50_A4JQX8 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-172 UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS... 606 e-171 UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 606 e-171 UniRef50_A1WC44 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Ar... 605 e-171 UniRef50_Q1NS23 PAS:GGDEF:EAL:Response regulator receiver n=4 Ta... 605 e-171 UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Ta... 605 e-171 UniRef50_Q3A254 Periplasmic sensor diguanylate cyclase/phosphodi... 605 e-171 UniRef50_C6QG37 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hy... 605 e-171 UniRef50_A0YED8 Putative diguanylate cyclase/phosphodiesterase (... 605 e-171 UniRef50_A1K8Z7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 605 e-171 UniRef50_Q1QZB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_A6Q9W1 Putative uncharacterized protein n=1 Tax=Sulfuro... 605 e-171 UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desu... 605 e-171 UniRef50_B6R1T0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 605 e-171 UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 T... 605 e-171 UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 T... 605 e-171 UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Me... 605 e-171 UniRef50_Q3IEF5 Putative uncharacterized protein n=3 Tax=Alterom... 605 e-171 UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclass... 605 e-171 UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_A5IAE9 Sensory box protein, GGDEF family protein, LssE ... 604 e-171 UniRef50_B8DMV5 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_A3YH84 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 604 e-171 UniRef50_C6XCZ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=B... 604 e-171 UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_A5VGA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sp... 604 e-171 UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 68... 603 e-171 UniRef50_Q21YJ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 603 e-171 UniRef50_C6WT76 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_B9MF12 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_Q0KC83 Predicted signal transduction protein containing... 603 e-171 UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_Q1NLX3 GGDEF:EAL n=2 Tax=delta proteobacterium MLMS-1 R... 603 e-170 UniRef50_Q31JB1 Response regulator receiver modulated diguanylat... 602 e-170 UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_Q1YPY3 PAS:GGDEF protein n=1 Tax=gamma proteobacterium ... 602 e-170 UniRef50_B5ZH00 Response regulator receiver modulated diguanylat... 602 e-170 UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 602 e-170 UniRef50_C7RKP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_A0LBX0 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction ... 602 e-170 UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinoco... 602 e-170 UniRef50_Q1YK72 Putative sensory protein, diguanylate cyclase n=... 602 e-170 UniRef50_C9RXJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_B5W9L6 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 601 e-170 UniRef50_D0J677 Diguanylate cyclase/phosphodiesterase n=2 Tax=Co... 601 e-170 UniRef50_C1AC92 Putative uncharacterized protein n=1 Tax=Gemmati... 601 e-170 UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 601 e-170 UniRef50_Q8DHG0 Tlr1999 protein n=1 Tax=Thermosynechococcus elon... 601 e-170 UniRef50_C7R9T3 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_Q139W0 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_Q1NTC4 PAS:GGDEF:EAL:Response regulator receiver n=3 Ta... 600 e-170 UniRef50_C5SQE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_Q0A846 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_C1F295 Cyclic diguanylate phosphodiesterase/diguanylate... 600 e-170 UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum... 600 e-170 UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 600 e-170 UniRef50_B1XWM7 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 599 e-169 UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 599 e-169 UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GA... 599 e-169 UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp... 599 e-169 UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus... 599 e-169 UniRef50_C5SBC3 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_Q47VW2 GAF domain/GGDEF domain/EAL domain protein n=1 T... 599 e-169 UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_Q2RNE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 598 e-169 UniRef50_Q0A9N6 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinib... 598 e-169 UniRef50_B5W2K6 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 598 e-169 UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromatic... 598 e-169 UniRef50_Q21WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_A1SWA5 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_Q1N484 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 598 e-169 UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_Q07MF6 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_A9WJ06 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 597 e-169 UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thioo... 597 e-169 UniRef50_C6XK75 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_C6WUZ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_Q12T53 Periplasmic sensor diguanylate cyclase/phosphodi... 597 e-169 UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 ... 596 e-169 UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF d... 596 e-169 UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-169 UniRef50_Q3A5U6 Response regulator receiver modulated diguanylat... 596 e-169 UniRef50_Q48MD9 Sensory box protein/response regulator n=5 Tax=P... 596 e-169 UniRef50_B1ZLG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-169 UniRef50_A8FVX9 Signal transduction protein containing a membran... 596 e-169 UniRef50_Q2BQB2 Sensory box protein n=1 Tax=Neptuniibacter caesa... 596 e-169 UniRef50_B1WWC9 Putative uncharacterized protein n=2 Tax=Cyanoth... 596 e-168 UniRef50_A9CI56 GGDEF family protein n=5 Tax=Rhizobiales RepID=A... 596 e-168 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 596 e-168 UniRef50_A6SXB0 Signal transduction protein n=2 Tax=Oxalobactera... 596 e-168 UniRef50_C0N5Y8 Putative uncharacterized protein n=1 Tax=Methylo... 596 e-168 UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n... 595 e-168 UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 595 e-168 UniRef50_C5V1X8 Response regulator receiver modulated diguanylat... 595 e-168 UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH 595 e-168 UniRef50_A4TYP2 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 595 e-168 UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonen... 595 e-168 UniRef50_Q2N9U4 Sensory box/GGDEF family protein n=5 Tax=Sphingo... 595 e-168 UniRef50_A7K1J3 Sensory box/GGDEF family protein ScrC (Involved ... 595 e-168 UniRef50_A0L6C9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 595 e-168 UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Sh... 594 e-168 UniRef50_Q7UTZ4 Putative uncharacterized protein n=1 Tax=Rhodopi... 594 e-168 UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 594 e-168 UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_Q3A5Q2 Response regulator receiver modulated diguanylat... 594 e-168 UniRef50_A9KPL6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Cl... 594 e-168 UniRef50_B8FI78 Response regulator receiver modulated diguanylat... 594 e-168 UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elon... 593 e-168 UniRef50_A3J9Q2 Putative uncharacterized protein n=1 Tax=Marinob... 593 e-168 UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_A2SIL3 Signal transduction protein n=1 Tax=Methylibium ... 593 e-168 UniRef50_Q1GVY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacill... 593 e-168 UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Bu... 593 e-168 UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromob... 593 e-168 UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 593 e-168 UniRef50_Q2RWS9 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 593 e-168 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 592 e-167 UniRef50_A5EN18 Periplasmic sensor diguanylate cyclase/phosphodi... 592 e-167 UniRef50_B3PCW8 Sensory box/GGDEF domain/EAL domain protein n=1 ... 592 e-167 UniRef50_C4ZM14 Response regulator receiver modulated diguanylat... 591 e-167 UniRef50_C7RC12 Diguanylate cyclase/phosphodiesterase with PAS/P... 591 e-167 UniRef50_C9YG65 Uncharacterized signaling protein PA1727 n=1 Tax... 591 e-167 UniRef50_C1CZG3 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 591 e-167 UniRef50_Q2RVK9 Putative diguanylate cyclase/phosphodiesterase (... 591 e-167 UniRef50_A7BRN3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 591 e-167 UniRef50_C6DFX5 Diguanylate cyclase/phosphodiesterase with PAS/P... 591 e-167 UniRef50_A1WTF5 Diguanylate cyclase/phosphodiesterase with PAS/P... 591 e-167 UniRef50_Q31DJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 591 e-167 UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT 590 e-167 UniRef50_A1VFP9 Periplasmic sensor diguanylate cyclase/phosphodi... 590 e-167 UniRef50_C8X1L9 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_Q9HYT3 Uncharacterized signaling protein PA3311 n=9 Tax... 590 e-167 UniRef50_A4XFJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_C3MGT7 Putative diguanylate cyclase (GGDEF)/phosphodies... 590 e-167 UniRef50_B0C8G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_Q0AAF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase... 590 e-167 UniRef50_Q2SNY4 Predicted signal transduction protein containing... 590 e-167 UniRef50_A6C049 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 590 e-167 UniRef50_A5PAA5 Sensory box/GGDEF family protein n=1 Tax=Erythro... 590 e-167 UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT ... 590 e-167 UniRef50_Q2SKH9 Predicted signal transduction protein containing... 590 e-167 UniRef50_B8DQX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-166 UniRef50_A4Y0T1 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-166 UniRef50_B7ITK1 Sensory box/ggdef family n=144 Tax=Bacillus cere... 589 e-166 UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 589 e-166 UniRef50_Q7NSJ7 Putative uncharacterized protein n=1 Tax=Chromob... 589 e-166 UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 589 e-166 UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/P... 589 e-166 UniRef50_UPI0001C3140A diguanylate cyclase/phosphodiesterase wit... 589 e-166 UniRef50_UPI0001AEC71A response regulator receiver modulated dig... 589 e-166 UniRef50_Q15PZ4 Response regulator receiver modulated diguanylat... 589 e-166 UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax... 588 e-166 UniRef50_Q2W603 Predicted signal transduction protein containing... 588 e-166 UniRef50_A9BVR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 588 e-166 UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 588 e-166 UniRef50_B5ZD56 Diguanylate cyclase/phosphodiesterase with PAS/P... 588 e-166 UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 588 e-166 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 588 e-166 UniRef50_Q0AIM6 Diguanylate cyclase/phosphodiesterase n=35 Tax=B... 588 e-166 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 588 e-166 UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/P... 588 e-166 UniRef50_Q07HD2 Diguanylate cyclase/phosphodiesterase with PAS/P... 588 e-166 UniRef50_Q7UUK0 Putative uncharacterized protein n=1 Tax=Rhodopi... 587 e-166 UniRef50_Q3SJE6 Putative diguanylate cyclase/phosphodiesterase (... 587 e-166 UniRef50_C5D169 Diguanylate cyclase/phosphodiesterase with extra... 587 e-166 UniRef50_A4ADN7 Sensory box EAL/GGDEF family protein n=2 Tax=unc... 586 e-166 UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-166 UniRef50_A0YUF3 Putative uncharacterized protein n=1 Tax=Lyngbya... 586 e-166 UniRef50_D2LTE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-166 UniRef50_D1CDW9 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-166 UniRef50_B1YEJ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-166 UniRef50_A4TXR0 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 586 e-166 UniRef50_Q315P5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 586 e-165 UniRef50_C1F8P8 PAS domain S-box/GGDEF/EAL domain protein n=1 Ta... 586 e-165 UniRef50_UPI0001698B39 diguanylate cyclase/phosphodiesterase wit... 586 e-165 UniRef50_B9R6G6 Putative uncharacterized protein n=1 Tax=Labrenz... 586 e-165 UniRef50_B1HMM5 Sensory box/GGDEF family protein n=2 Tax=Bacilla... 586 e-165 UniRef50_B1Y3L9 Response regulator receiver modulated diguanylat... 586 e-165 UniRef50_A3YI96 Sensory box/GGDEF family protein n=1 Tax=Marinom... 586 e-165 UniRef50_C5T6Q1 Diguanylate cyclase/phosphodiesterase with extra... 586 e-165 UniRef50_B9MQD5 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-165 UniRef50_A3ITH6 Putative diguanylate cyclase/phosphodiesterase (... 585 e-165 UniRef50_C8QI11 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 585 e-165 UniRef50_B9ZM87 Diguanylate cyclase/phosphodiesterase with GAF s... 585 e-165 UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 585 e-165 UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 585 e-165 UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 585 e-165 UniRef50_Q2SLT6 Predicted signal transduction protein containing... 585 e-165 UniRef50_B2JE89 Diguanylate cyclase/phosphodiesterase n=58 Tax=B... 585 e-165 UniRef50_D2LY77 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 585 e-165 UniRef50_B3E3Z2 Diguanylate cyclase/phosphodiesterase with GAF s... 585 e-165 UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/P... 585 e-165 UniRef50_B2JAQ1 Diguanylate cyclase/phosphodiesterase n=1 Tax=No... 585 e-165 UniRef50_Q5P652 Putative uncharacterized protein n=1 Tax=Aromato... 584 e-165 UniRef50_B1J9N2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ps... 584 e-165 UniRef50_C9Y997 Putative uncharacterized protein n=1 Tax=Curviba... 584 e-165 UniRef50_B6AQB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 584 e-165 Sequences not found previously or not previously below threshold: >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 101/566 (17%), Positives = 200/566 (35%), Gaps = 26/566 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + I + + + ++ + I GY V Sbjct: 317 IISDISARKRNEQELVLLKRAMESSINGITITDATHPDNPIIY---VNPAFERITGYGVD 373 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F G + + L A + + + + +A + Sbjct: 374 EVIDKNPRFLRGDDRDQAELKKLVQAFKEEREGCFVLRNYRKDGSPFWNELFIAPVRDRD 433 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGK 350 + ++ + QA DPLT LPN L+ + Sbjct: 434 GVVTNYIGVMNDITEHRRYEEQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPI 493 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +DN + ++ G + ++++ L ++ + + +L G E ++VL Sbjct: 494 CVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVRE 553 Query: 411 EGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + + + + F + ET+ LL + Sbjct: 554 VPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKE 613 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 ++ + +++ L ++ A+ + LL+ QP + G + ++ Sbjct: 614 QGKN-NYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVR 672 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT 583 + G+++P KF+PL + L VL + R +VNL Sbjct: 673 WNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQ 732 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q+N+ + + ++PQ + LE+TE AE S + +L G +AIDDFG Sbjct: 733 FRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFG 792 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR +KID F++D+ + DA +V++I +A + +AE VE + Sbjct: 793 TGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAE 852 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + + +QGY RP + Sbjct: 853 QIDFLCRHQCEEMQGYYFSRPITAEE 878 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 53/189 (28%), Gaps = 3/189 (1%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + +V F + + D + L +L +L +++ + R + S F Sbjct: 21 LLALLLIVFVIELFLMVLLPRTADGGTPLAISLLDALLLVILSAPIIWLSIVRPLRSVAF 80 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 L + + +F + Y++ G + I + G Sbjct: 81 TASLHTDLLLDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGK 140 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRIYHR 314 L L ++ + + A L+ + V L +VR Sbjct: 141 DN--PLLTPLVCCGEEHSRLTCEAEGIRSDGSRFPAALSLSRVQMKGVWHFLGIVRDVTE 198 Query: 315 SEWLNRRWH 323 S R Sbjct: 199 SRETGERLR 207 Score = 51.9 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 8/134 (5%), Positives = 29/134 (21%), Gaps = 14/134 (10%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFF----IIF 251 R ++ TL + ++ + I G+ + Sbjct: 200 RETGERLRETNEKLDTLIQASPQGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLGKPYPVA 259 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 L + + + + ++ A + S ++ + Sbjct: 260 PAERAAEHRKLRELVLQGKRIT--DVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITI 317 Query: 309 VRIYHRSEWLNRRW 322 + + + Sbjct: 318 ISDISARKRNEQEL 331 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 96/453 (21%), Positives = 182/453 (40%), Gaps = 16/453 (3%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 A + ++ + + + + + A D LT LPN Sbjct: 482 AQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQA 541 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +D+ + ++ G + ++ I + L+++ + + ++ G E + Sbjct: 542 HRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTI 601 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L + + + + N + + + + LL Sbjct: 602 LLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADA 661 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 Q+ ++ QT ++ L N +R ALD+ + ++Y QP + Sbjct: 662 AMYQAKEMGRN-NYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIV 720 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 G + ++ G+++P +F+P+ + L +L R + Sbjct: 721 GVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVT 780 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL LQ ++ I + + + PQ + LEITE A + + + +L K G Sbjct: 781 VNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGIT 840 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ LKRL DI+KID F+ D+ T + D I+ +I L + VVA Sbjct: 841 LAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVA 900 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L + +QGYL +P P+ + Sbjct: 901 EGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRE 933 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 740 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 120/602 (19%), Positives = 210/602 (34%), Gaps = 23/602 (3%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 + + D KI + DA F L + L +L+ L + +R Sbjct: 256 LIARVDMRRKIYSQGVDAVQYFLFCFLGFCLISSLTGYILYAKLLASRKERKDTEKRYRS 315 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 I+ + S + L Y D + GV Sbjct: 316 VISQASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTLYDIMEDDRSGVDWRINRI 375 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV-RIYHRSEWLNRR 321 L+ + + ++ ++ MV R + Sbjct: 376 LSEKVC------FLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICMVLRDISERKRFEGE 429 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRV 373 A D LT LPN Q + L +D + ++ G Sbjct: 430 LMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGHHTGD 489 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNN 430 ++ + L ++++ + + +L G E +++ T + + S Sbjct: 490 MLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSAPFRLEK 549 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + + + + +T + LL + E ++ + ++++ Sbjct: 550 HEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRN-TYQFFSEEMNSRVSERLS 608 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + +R AL + + LL+ QP N G + ++ + G++ PD F+PL + L Sbjct: 609 METGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGL 668 Query: 548 SARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VL + R SVN+ N+ I + + + P Sbjct: 669 IIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSC 728 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE N E ++ + +L + G IAIDDFGTGY++ LKRL ADI+KID F Sbjct: 729 LELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSF 788 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V I N D +V +I +L L +VAE VE Q+Q L + Q +QGY +P P Sbjct: 789 VSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLP 848 Query: 727 LA 728 Sbjct: 849 AE 850 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 99/565 (17%), Positives = 206/565 (36%), Gaps = 36/565 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 ++ E+R + A V++ F + + + Sbjct: 301 ITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAY-FNPAFSRVFGWTLDESIGR 359 Query: 257 KLRYPFLNLTWAVSTL--------CLLNYNQNFLQGVETEYSLAFILAVLISF---SVCL 305 + + + + L L + + A Sbjct: 360 NIDFLPVENVPENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQGS 419 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----------------EAG 349 + ++ + A D LT L N ++ E Sbjct: 420 IITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHK 479 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D ++++ G + ++ + L +++++ +++L G E ++L+ Sbjct: 480 WALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLT 539 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + +R + L + + + + ++ L+ + Sbjct: 540 DDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMYAAK 599 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILA 524 E ++ +T ++++L N +R AL L++Y QP+ + + G + +L Sbjct: 600 EE--NQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVDSTNQIVGMEALLR 657 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 + G+++P +F+PL + L VL + +VNL Sbjct: 658 WHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQ 717 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + ++ I ++ + + P + LE+TE + E ++ ++ L G +IDDFG Sbjct: 718 FREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFG 777 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR D +KID FV D TN D I+++I +A+ + VAE VE ++ Sbjct: 778 TGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKE 837 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 QQ L G +QGY GRP P Sbjct: 838 QQDFLIHHGCHMMQGYYFGRPMPAE 862 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 8/128 (6%), Positives = 24/128 (18%), Gaps = 8/128 (6%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGKL 258 + ++ L + + L + GY V Sbjct: 185 RKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPP 244 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRIYHRS 315 + + L ++ T + + I+ ++ Sbjct: 245 EHRKPLTLERIKEWKGLIRESVNIRKDGTTFLVWLMSEIVKNAKGEPFAIVTSCEDITER 304 Query: 316 EWLNRRWH 323 + Sbjct: 305 KQAEEALR 312 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 118/637 (18%), Positives = 229/637 (35%), Gaps = 31/637 (4%) Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + R++++ ++ +++ +S +AI L L Sbjct: 269 APLKTNRIYFITVMAVGTSVTLLFVWFLMQRLTSPLSLITRHVEAIPDKSGL-----HNL 323 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCT 232 I L +I + + + + E L+ A + + L Sbjct: 324 INLERKDELGTLINAFNSMILSLDQHQNALRESESNFRALADNANDGLQIITDSSHLAYV 383 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPF----LNLTWAVSTLCLLNYNQNFLQGVETE 288 I GY V + + + + + Sbjct: 384 NKRAAEIVGYSVEEMLLTTIETIIHPDHLQMIIERKAKTDAGEFVPKQFEIMLAHRNGSC 443 Query: 289 YSLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 + A I + L +VR + A D LT LPN L+ Sbjct: 444 VPVEVTTARTIWQGKQVELAIVRDITDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQG 503 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D + ++ G + + ++ L ++E + + ++ G Sbjct: 504 IVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLTECVRETDTVARIGGD 563 Query: 400 ELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++++S E L + + S+ + N+ + + + + +Q LL Sbjct: 564 EFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLK 623 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 ++ A ++ Q + ++L N++R AL++ + +++ QP + Sbjct: 624 NADLAMYKAKDQGKN-AFQYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQMDLKS 682 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 G + ++ D G++ P +F+P+ + L L++ Sbjct: 683 GRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMP 742 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VNL + QK I + K+ ++P + LE+TE S AE S + +L + Sbjct: 743 LRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKE 802 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +AIDDFGTGY++ LK + +KID F++D+ N D IV +I +A +L Sbjct: 803 MGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNL 862 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V AE VE Q L +QGYL+ P P A+ Sbjct: 863 KVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAE 899 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 128/655 (19%), Positives = 227/655 (34%), Gaps = 27/655 (4%) Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFW--LGLVTPIGIKCSMYLVGSFFDFPLKIST 155 A L Q L LGL+ + + + Sbjct: 277 GLGWASLVRQDVNTAFAPARQLQQHIWLVGAALGLLFAWLGWLMAGRIARPISLISQAAD 336 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 D + + L + + + + + + + E Sbjct: 337 KVAGGDLEYELPARLGEGEVAHLSTAIHDMVVNLTHEIKQRKEAEQGLRLSAKVFESNTE 396 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVP--VFFIIFTLGVGKLRYPFLNLTW-AVSTL 272 + A +++ I GY + L G+ F W A+ Sbjct: 397 AIMITDAEQNIVM---VNQAFTQITGYGADEVLGQRPKLLSSGRHGPEFYEAFWHALRAN 453 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 L + + ++ L + + + R + A D Sbjct: 454 DLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLDITERKKEEERINYLANYD 513 Query: 330 PLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN L + + +D + ++ G + ++ + Sbjct: 514 VLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAA 573 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYG 438 L ++ ++ + +L G E + +LS ++ + + + + L + Sbjct: 574 RLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPS 633 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + ET LL Q+ ++ + +++ L +R A Sbjct: 634 IGICIYPDDGETSVELLRNADLAMYQAKDDGRN-NFKFYSPDMNRKALERLKLETFLRVA 692 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + Q L +Y QP + + G + +L + G ++P F+P+ + L V Sbjct: 693 IVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIAEETGLINEIGDWV 752 Query: 556 LESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L +VNL L Q N A R++ + + + ++LEITE Sbjct: 753 LRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAGLDAHYLVLEITES 812 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 S ES + +EQL G R+A+DDFGTGY++ RLK L D +KID FV+DIVT+ Sbjct: 813 MLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDP 872 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV + LA A +L V AE VETQ+Q + L + QGYL RP P ++ Sbjct: 873 NDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASE 927 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 109/617 (17%), Positives = 217/617 (35%), Gaps = 30/617 (4%) Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + + + + + + I +VD + L I + Sbjct: 328 SSALWAFLVGLLLSVVSAIYVQLIVDRSRRIQLLVD-----DRTAQLRTVNDDLIADIAA 382 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---I 249 A+ + +A L I GY I Sbjct: 383 RKHAEHELQLRERAIEASANAIIIARAVAPD---YPLEYVNPAFTRITGYSPEEALGRNI 439 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLL 306 F G + L + + + +A + + Sbjct: 440 GFLWGKDWEQPGIEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPVKDDTGEVSHFV 499 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRID 358 + ++ Q D LT L N L Q + + +D Sbjct: 500 VALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDLD 559 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 +F++ G +++I L +++ + + ++ G E +L+L G +V Sbjct: 560 RFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDAGLSTGIV 619 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + ++ + + + + T + L+ ++ Sbjct: 620 QRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRN-NFQ 678 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 ++ + +++ L +R A+++G+ +L+ QP + + G + ++ + G+ Sbjct: 679 FYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGM 738 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAG 591 + P +F+ L + L V+ + G R SVNL Q+++ Sbjct: 739 IPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLE 798 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I + + PQ + +E+TE ++ + ++ + +L G +++IDDFGTGY++ Sbjct: 799 SIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSY 858 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR D++KID FV DI T+ DA IV SI LA + L+V+AE VET++Q A L + Sbjct: 859 LKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQH 918 Query: 712 GVQYLQGYLIGRPQPLA 728 +QGY RP Sbjct: 919 DCDQIQGYFFSRPITAD 935 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 126/764 (16%), Positives = 260/764 (34%), Gaps = 76/764 (9%) Query: 7 LIKNIKIFTL---AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRG 63 L I L L + +S +A + + F+ ++ L+ ++ G Sbjct: 74 LAMAIGQKALMVDPRHLHAFFPPVEHVLSGVATVIVAAAFMRYLTGDFFLARNYL-GIGI 132 Query: 64 VVPVLCGMFCTNLWNFHLS----------FLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 + + C + + W +++ + + +V + R + G Sbjct: 133 TLTLSCYIATFSWWADYITTNPASKFGQTWCDVLFHTIAALLLVFPTWHLFRHRTGWLRN 192 Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 I ++ L + + IFT + Sbjct: 193 I---------------------ICFALVCFFLTETLKLVDIAYGERYEYIFTPIRRSFNL 231 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 + + ++ + RR A + EKR TL + + L + Sbjct: 232 IGIYVLGYVY---------IREQESRRRRATAKVVESEKRYRTLVENVNMGISL--IDGN 280 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLN----------LTWAVSTLCLLNYNQNFLQ 283 GYL +F G+ Y A++T ++ + Sbjct: 281 NRIVMNNGYLEKMFRKNAEKLTGRFCYQEFENRDECCDNCLGVEAMTTGRAVSREVERIL 340 Query: 284 GVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 L + + + +V + + A D LT LPN + Sbjct: 341 DDGEPSGLRLSAFPVFNEQGKATKFIKVVEDITDRKRAEEKIRRLAYYDSLTGLPNRPLM 400 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + L +D + ++ G + ++ + L +E++ Sbjct: 401 MDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAARLSGCTRESDT 460 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 L +L G E +++ G + + + + + L + F + Sbjct: 461 LARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIGIVLFPSDGG 520 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL + + + ++ + ++ L +R AL G+ L Q Sbjct: 521 NGEMLLQRADMAMYAAKDRGGN-SYRFFSAEMNTRAVERHELEEDMRQALTNGEFFLMYQ 579 Query: 510 PIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P N + G + ++ G++ P +F+P+ + ++ VLE + A Sbjct: 580 PQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEACRQGAQW 639 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 D + VNL + I G + + ++ + + + +E+TE ++E+++ Sbjct: 640 QHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLM-DSETAVS 698 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + QL G R+AIDDFGTGY+++ LK D IKID F++DI + + I+ +I Sbjct: 699 TLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVA 758 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A++ V+AE VET++Q L + +QG+ RP D Sbjct: 759 VARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLPDD 802 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 101/651 (15%), Positives = 214/651 (32%), Gaps = 37/651 (5%) Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 G+ + RL P + + + ++ Sbjct: 215 GIITERDVLRLIAGTGPIPATVGEVASRPLLTITEEDSLLAARAMLEQKHIRHIGITRMD 274 Query: 175 AVLIYNMLFYYLTRMIV-----SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL- 228 L+ + F + + A + S A + + ++++ Sbjct: 275 GELVGLLSFSDILATLQYEYVHRLDEALKERDAALLRSRKDLNLARKVIEASLDGIMIVD 334 Query: 229 ----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + + GY + ++ + Sbjct: 335 STQKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETFYKHMYTVLEAQDYWQGEIWN 394 Query: 282 LQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + Y + V+ + + R A D LT LPN R Sbjct: 395 RRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRR 454 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + L +D + ++ G + + + ++E Sbjct: 455 LFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVREG 514 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E ++L + + + + + + ++ L + + + Sbjct: 515 DTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPED 574 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 T++ L+ ++ + ++ ++ +++ + +++R AL + + L Sbjct: 575 GTTVEALIKNADTAMYRAKDLGRN-SYQLYTAAMNARSFERLTMESSLRHALTREEFRLV 633 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 Q + G + ++ + G+++P F+PL + + VL + + Sbjct: 634 YQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCK 693 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 R +VN+ ++ ++ + R + + PQ + LE+TE + Sbjct: 694 HWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELELTETVLMQRVDEV 753 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN-----TLDAM 678 + ++ L G RI+IDDFGTGY++ LKR+ D +K+D FV DI A Sbjct: 754 VAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAE 813 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV +I +LA L +AE VET +Q L G +QGYLI RP D Sbjct: 814 IVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGED 864 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 116/696 (16%), Positives = 236/696 (33%), Gaps = 51/696 (7%) Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 ++ V LR + RL +V + + Sbjct: 253 STRMSAFLAEVGTVEPMLERLRAHSDQTAVATRNTVQRLTRLTGWTIVATSLLAILAGSM 312 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDL-------------LSLFTAVLIYNMLFYYLTRMI 190 +FF + G D + L R++ Sbjct: 313 VAFFTSRSITRSVKGCMDFAGRLAGGDLAVRMEAGGDNEFGRLATALNCMADELQGHRLL 372 Query: 191 VSPHFAQ-----ILWRRDIAPSLGKEKRAF---TLSWLAALSVLLL--------LLCTPY 234 A+ +IA E+ ++ +++ ++ Sbjct: 373 QEERTAELAGANSALETEIAEHRDAEEALRQRQRAIDSSSNGIMITDALELDHPIIYVNP 432 Query: 235 ENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + I GY + + + A+ L + + + + Sbjct: 433 AFERITGYAASEVLGRNPRLLCSGDREQLGLEVIRVALCELREGHAELRNYRKDGSLFWN 492 Query: 292 AFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 A ++ ++ + +V + + Q+ D LT LPN L Sbjct: 493 ALSVSPVLNAAGEVTNYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQAL 552 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + + + +D+ +F++ G M ++ R L ++ + + + G E Sbjct: 553 TYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSECVRSIDTVARHGGDE 612 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++VLS + + R L + + + Q LL Sbjct: 613 FVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKDGSDAQVLLKN 672 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 ++ ++ ++ + +R AL++ + L++ QP + Sbjct: 673 ADVAMYRAKQCGRN-NFQFYTGDLNDIVLARLTMEKYLRRALERDEFLVHYQPKVDLLSG 731 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGP 573 G + ++ + G ++P F+PL + L VL + D Sbjct: 732 RITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPPM 791 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VNL P Q+++A + R+ + ++P+ + LE+ E + + ++ ++ L + Sbjct: 792 VVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKEL 851 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++ +DDFGTGY++ LKR D++KID FV+DI + A IVR++ LA +L Sbjct: 852 GVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLR 911 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE +ET+ Q L L +QG+ RP P A+ Sbjct: 912 VVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAE 947 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 127/759 (16%), Positives = 263/759 (34%), Gaps = 40/759 (5%) Query: 1 MFVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSI---- 55 + + + I+ + F + L + ++ L + S + + L + + Sbjct: 45 LLCAGAVSMGLGIWAMYFVAMLALHLPIAVEYDHLIVFFSIVLAVLSSALTLWIVSEQSM 104 Query: 56 ---LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRW 112 + G + + GM T + ++ + L + + + + T Sbjct: 105 SKTRVVKGSVVIGTGIAGMHYTGMAAMMMNAVILYDWLWFTVSIFVAILFSMVALILTFQ 164 Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + R + GL+ I Y F + L++ Sbjct: 165 LRSVDPVEGLWRKIFAGLLMGASITGMHYTGMYATTFVAHEHMTIA--VIPYDDSGLIAT 222 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 ++ +L L + V FA R ++R +L V+ + Sbjct: 223 MIGIVSVLILVVTLASVYVDKQFAGKTLRVLE-----SDQRYKSLFEHNYDGVIFYSIDG 277 Query: 233 -----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + + T+ + N + Sbjct: 278 TQSVMNPAAMRLTKEQSLPLEKLKTMCISTDAELISTHFTNAVQGDARNCDITLTTREGC 337 Query: 288 EYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + L + + +VR + + + A D LT LPN R +EQ + Sbjct: 338 QLHLNMTHTPVFVDQQITGVFMIVRDITNKKEYEAKINYLAFHDSLTGLPNRRFVEQQLD 397 Query: 346 Q--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 Q + L +D+ + ++ G ++ L + + +Y+L Sbjct: 398 QVIMEAQKTDQQVYVLFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGKKGTVYRLG 457 Query: 398 GSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +++L+ TE + M N + + + L + R+ + + L Sbjct: 458 GDEFMVILTDV-TEREVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVL 516 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 + + + + ++ + N + AL + + LL+ QP + Sbjct: 517 MRNADAAMYAAKDKGKN-SFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSA 575 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + ++ + G++ PD+F+ + + L VL + K Sbjct: 576 KSGAIVGVEALIRWDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGL 635 Query: 572 -GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R +VNL L+++ I + + ++P+ + LEITE + + +++L Sbjct: 636 KPLRVAVNLSARQFLKQDFTQMIAEILHQTRLAPEYLELEITESSMI-DVHRATQALKEL 694 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G +AIDDFGTGY++ LK + +KID FV+D++ + IV +I +A Sbjct: 695 KQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHL 754 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET+++ A L + + +QGYL RP P D Sbjct: 755 QMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRPLPSED 793 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 115/588 (19%), Positives = 219/588 (37%), Gaps = 36/588 (6%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDI-----APSLGKEKRAFT---LSWLAALSVL 226 +I M FY + ++L KE++ + ++ ++ Sbjct: 449 GNVIGVMFFYSNVLNAFTESSQRLLLELVEDIDFALEHFEKEEQLQLSAQIFAQSSEGIM 508 Query: 227 L-----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 L ++ I GY R + + A+ T Sbjct: 509 LLDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQHDRNFYATMWEAIETEGRWQGE 568 Query: 279 QNFLQGVETEYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + Y ++ + + R A DPLT LP Sbjct: 569 VWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLP 628 Query: 336 NFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L + + L +DN + ++ G + ++ + L+ + Sbjct: 629 NRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAV 688 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 +E + + +L G E +LVL G +T+G ++ L +RQ + +++ + Sbjct: 689 REQDTISRLGGDEFVLVLPGTDTDG-AAYLAERLLNIAARQYNIERHEINLTVSIGIAMY 747 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + L ++ + ++ + + + N +R AL++ Sbjct: 748 PTDGTDFDTLWRSADAAMYRAKQSGRND-YCFFTTEMQARSARTLQIDNALRRALERNQF 806 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP + G++ ++ G PD+F+P+ VL++ ++ Sbjct: 807 SLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVR 866 Query: 562 WLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L + SVNL + + ++ + + +SP+ + LE+TE A N Sbjct: 867 QLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENP 926 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 +++ I++L K G RI+IDDFGTGY++ LKR +KID FV+D+ +T D IV Sbjct: 927 LAAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIV 986 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ LA + + VAE VET++Q L G +QGY + RP Sbjct: 987 SAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQAD 1034 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 113/558 (20%), Positives = 211/558 (37%), Gaps = 26/558 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPVFFII 250 ++ E+R L A V+ LL +P + Sbjct: 388 ISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKA 447 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE-YSLAFILAVLISFSVC---LL 306 + +Y + +L + + L + + S ++ Sbjct: 448 LLPVIMLPEQLATAAGMEQMICSDTSYYREYLSPTREGKRWIGWALRCIFNQSGQAEAII 507 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 M R + A DP+T LPN L G + L +D Sbjct: 508 GMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLD 567 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G M +R + LL ++ ++ + +L G E ++++S + + + +V Sbjct: 568 RFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVV 627 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + ++ + F + + LL Q+ Sbjct: 628 MKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTC-H 686 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 ++ + T+++LL +T+R AL++ + L QP + G + +L D G+ Sbjct: 687 FFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGV 746 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P+ F+P+ + L VL + + R +VN+ Q+N+ Sbjct: 747 VPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGL 806 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI ++ + P + LE+TE N E ++ + QL K G ++IDDFGTGY++ Sbjct: 807 RIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSH 866 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK D +KID FVK + + DA I +I LA + L+VVAE +E +Q +H+ Sbjct: 867 LKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQR 926 Query: 712 GVQYLQGYLIGRPQPLAD 729 +QGY + RP + Sbjct: 927 HCDTMQGYYLSRPVTAEE 944 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 115/583 (19%), Positives = 225/583 (38%), Gaps = 28/583 (4%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + + L Y + ++ + T + ++L Sbjct: 301 IIWTSVSAAPLSYDSNSCVT-VTTDITKRKQFESELRVSATAFETQEGILITDENNVMLR 359 Query: 232 TPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 T I GY + + + A++T + + Sbjct: 360 TNAAFTAITGYTNKEAIGQNPRLLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEI 419 Query: 289 YSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 Y + + + ++ + + + A DPLT LPN R L + Sbjct: 420 YPEHLTVTAVKDRNGMVTNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLK 479 Query: 346 QE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 Q + + +DN + ++ YG M ++ + + L+ +++ + + + Sbjct: 480 QAMASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFG 539 Query: 398 GSELLLVLSG-----PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 G E +++L G + + + + + + F+ Q+ Sbjct: 540 GDEFVVLLEGFDENPLDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQ 599 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 ++ L+ Q Q+ L + + K+ L +R A++ L+ Q Sbjct: 600 SIDELMKQADIAMYQAKKEGRN-VLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQ 658 Query: 510 PIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + G + ++ + G+++PD+F+PL + +L VLE+ + Sbjct: 659 IQVDESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQ 718 Query: 568 --CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 G SVN+ Q + ++ L ++Y I+P + LE+TE N E ++ Sbjct: 719 HDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIA 778 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L + G + ++DDFGTGY++ + LKRL D +KID FV+DI + D IVR+I Sbjct: 779 TMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIA 838 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A + L V+AE VET++QQ L G + QGYL G+P P+ Sbjct: 839 MAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIE 881 Score = 42.7 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 43/165 (26%), Gaps = 14/165 (8%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--- 228 L +L+ ++ RMI + H + D L ++ L + + V ++ Sbjct: 173 LARGMLVSRDVYGKPLRMIGT-HSDITQRKVDEELVLKNLEKWKKLFDILPIGVSIVNSK 231 Query: 229 --LLCTPYENDFIAGYLVPVFFIIFTLGVGKLR--------YPFLNLTWAVSTLCLLNYN 278 ++ + I G LR F +L + + Sbjct: 232 NGIVDFNPSLEAILGISKEGLLQGDYDNWEYLRTDNTHMDADEFPSLRAIKEQRVVKDVV 291 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + + A L S + + + + Sbjct: 292 IGVKKESGDIIWTSVSAAPLSYDSNSCVTVTTDITKRKQFESELR 336 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 109/565 (19%), Positives = 206/565 (36%), Gaps = 27/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLV 244 + +A + S + A + +++ I G+ Sbjct: 260 VHELQYALKERDEALNLSQQNLRLADKVFEATLEGIIITDAEGIIETVNPAFTRITGWRR 319 Query: 245 PVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + + +L ++ + Y+ + + Sbjct: 320 EEVVGKNPRILSSSQQPPEFYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGP 379 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + R H A DPLT LPN L + Q Sbjct: 380 DGTFTHYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRV 439 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D +F++ G + ++++ L ++ ++ + +L G E +VL Sbjct: 440 ALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRD 499 Query: 411 EGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + L R + + + + + + T + L ++ Sbjct: 500 LRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKE 559 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 ++ T ++ L + + AL + + L+ QP + G + +L Sbjct: 560 RGKN-NFQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLR 618 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 ++ G ++P F+P+ + NL + VLE + +VNL Sbjct: 619 WRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQ 678 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + Q +I + R+ + ++ + LEITE A N + ++ L G RIAIDDFG Sbjct: 679 MTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFG 738 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+L D++KID FV D+ + DA I +I + ++ +L VAE VE ++ Sbjct: 739 TGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREE 798 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 + L G QY QGYL RP P A Sbjct: 799 HRQFLLDHGCQYGQGYLFSRPVPAA 823 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 107/563 (19%), Positives = 215/563 (38%), Gaps = 27/563 (4%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGY-LV 244 S ++ E++ ++ + + + L +P Sbjct: 138 SIRSDITARKQMEDELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPD 197 Query: 245 PVFFIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 +F V R F A ST + ++ Sbjct: 198 EEIHNLFEWIVEDDRDIFAYAIQHAFSTRKEYMVECRINTQRNDVIWTESKINPIMDEEG 257 Query: 304 CL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSF 352 + L + R + H A D LT LPN R + QA ++ + Sbjct: 258 NVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAV 317 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D + ++ +G + + + L ++ + + +L G E ++ + Sbjct: 318 LFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRN 377 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + R + ++ + + + + LL + + Sbjct: 378 EATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRG 437 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARL 526 D + + ++ +++L+ N +R A++Q +Y QP + G + ++ + Sbjct: 438 KN-GYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWV 496 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + GI+ P++F+P+ + + +L+ K + SVNL + Q Sbjct: 497 HPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQ 556 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 K++ I + + +SP + LEITE E + ++Q+ G +I+IDDFGTGY Sbjct: 557 KDLVEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGTGY 615 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 +++ +K L D IKID F++DI N IV++I +A++ +++V+AE +E Q A Sbjct: 616 SSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVA 675 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L + G + QGYL +P P D Sbjct: 676 ALKENGCDHGQGYLFSKPLPTDD 698 Score = 48.4 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 3/66 (4%), Positives = 15/66 (22%), Gaps = 3/66 (4%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWL 318 F + + + + + Y + + + + L + + + Sbjct: 90 FKEMWSCIRSGQVWRGEIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYLSIRSDITARKQM 149 Query: 319 NRRWHL 324 Sbjct: 150 EDELKR 155 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 116/566 (20%), Positives = 211/566 (37%), Gaps = 29/566 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY- 242 ++ ++ E+R ++ A + L + GY Sbjct: 125 ILEGFIQDVTERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYD 184 Query: 243 ----LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 L+ I + + N+ + ++ + Sbjct: 185 SPQALISTLRDIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSV 244 Query: 299 ISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK----- 350 + LL V + QA D LT LPN L +Q Sbjct: 245 YNSDGTLLFFEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYG 304 Query: 351 ---SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D +F++ G + ++ + L ++E++ + + G E +L+L+ Sbjct: 305 KLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTD 364 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 E + H + + S+ N+ + + + LL + Sbjct: 365 QPNEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYK 424 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDE 521 + ++ T ++ LLN +R A+ D +L+ QP + + G + Sbjct: 425 AKELGRN-NFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEA 483 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ G+++P F+PL + L VL + + SVNL Sbjct: 484 LVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLS 543 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P L + +I + R+ + Q + LEITE ++ E S + QL G +I++D Sbjct: 544 PRQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLD 603 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR D +KID FV+DI T+ A IV++I L + +L+V+AE +E Sbjct: 604 DFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIE 663 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQP 726 T+ Q L G QGYL+ +P P Sbjct: 664 TEDQFQFLLANGCDEGQGYLMSKPVP 689 Score = 43.4 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 6/95 (6%), Positives = 23/95 (24%), Gaps = 9/95 (9%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLN------LTWAVSTLCLLNYNQNFLQGVETEYSL 291 + GY + ++ +P + AV + ++ + + Sbjct: 50 ALTGYTEEDLLFNSRVSYDQITHPDDRRHVRDTILEAVRNNRRFDIEYRIVRADGSIRHV 109 Query: 292 AFILAVLISFSVC---LLYMVRIYHRSEWLNRRWH 323 + + L ++ + + Sbjct: 110 WERGTNISHDNKAWDILEGFIQDVTERKQADEALR 144 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 104/569 (18%), Positives = 215/569 (37%), Gaps = 35/569 (6%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL--------------LLLLCTPYENDF 238 + + + + +V+ + + E + Sbjct: 278 IRHLKKKISKAYRELRKQHEWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLGLSEEEI 337 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + L + + + P + S + L + + + + +A + Sbjct: 338 LGKKLDKLLSGLVDKREKVYKIPIEEVVNRGSMIKL-ETDLSLVTPGGRRL-VEGTVAPI 395 Query: 299 ISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + S ++ V + + + + DPLT LPN Sbjct: 396 RNDSDVIIGTVVALKDITEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNN 455 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +DN + ++ G + ++ + + ++E + + ++ G E +++ Sbjct: 456 EMCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQ 515 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + G + E Q + + Sbjct: 516 IKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYR 575 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + E ++ + +++ + N++R A+++ + +L+ QP + + G++ Sbjct: 576 AKELGRN-NYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEA 634 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLM 580 +L D G+M P +F+P+ L VLE+ + P SVNL Sbjct: 635 LLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLS 694 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + NI I R+ ++P+ + LEITE A + ++ + QL K G R+++D Sbjct: 695 ARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLD 754 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L++L D +KID FV+DI N+ + I +++ LA L+VVAE VE Sbjct: 755 DFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVE 814 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T++Q L K QGYL +P P + Sbjct: 815 TKEQLLFLKKEKCDKAQGYLFSKPLPAEE 843 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 123/693 (17%), Positives = 231/693 (33%), Gaps = 27/693 (3%) Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 F+ R V+ + + VM S+T + + Sbjct: 169 FLVAARPVLTSKYAGPVRGVLVLGRLLDKEEVMRLSETIHIPLEIHTADDATLPPDFAAV 228 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 L I + + L + + + T Sbjct: 229 RGELAQGAPVVLRRADSKMIAGYAAIPDIYGKPALLLRVDAPRSIYQEGKKAVTYFLTWF 288 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 + + F ++ + + E+R + ++LLL Sbjct: 289 AVVGVCFAFIINLFWRR------LLESLQQGRRSEERNRLVVERTNQAILLLEPGAGTII 342 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV----STLCLLNYNQNFLQGVETEYSLA 292 D V + F L + V + E + Sbjct: 343 DANPATCVLLGFSRNELTGADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVE 402 Query: 293 FILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 + + L M QA D LT LPN LE Sbjct: 403 AMATQVPHGDDQALCLMFHDITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGA 462 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + +DN + ++ G +RS+ + ++ + +L G E ++ Sbjct: 463 RRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVI 522 Query: 404 VLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 VL+ + L + + + F + +T++ L+ + Sbjct: 523 VLTNLTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADT 582 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 + E ++ + ++ + +R AL++G++LL+ QP Sbjct: 583 AMYHIKESGRN-SFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVV 641 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 G + ++ D G+++P F+P+ L VL + R S Sbjct: 642 GMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVS 701 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + + R++R+ ++ +SP V LE+TE N + ++ + +L + G Sbjct: 702 VNISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGIT 761 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I+IDDFGTGY++ LKR D++KID F+ D+V DA IV +I +A + VVA Sbjct: 762 ISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVA 821 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET +Q LL + + +QG+ RP P + Sbjct: 822 EGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEE 854 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 111/628 (17%), Positives = 223/628 (35%), Gaps = 24/628 (3%) Query: 122 WQRLFWLGLVTPIGIKCS--MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 + WL ++ DA+ + T + ++SL L Sbjct: 6 AINMIWLAILLAFVYWFLEPTIYAFVLQKGTFTDKWLHPDAEELRTRMSVVSLLL--LFG 63 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYEND 237 L R Q ++ T+ + + + + D Sbjct: 64 VYAQTMLKRQQQIMESLQASKQKIRQIIDTANDAFITIDAEGSISDWNPMAEMIFGWPED 123 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 G + + + + + L E+ ++ Sbjct: 124 LAIGKSMMDLIMNQAPRNALIDDIQEFINTGSAPFTQGQIVITALHRDGHEFPAEMSISP 183 Query: 298 LISFSVCLLYMV-RIYHRSEWLNRRWHLQALTDPLTLLPNF----RALEQ----APEQEA 348 + + + R + + + A D LT L N L++ A Sbjct: 184 QAVGASFIFNIFVRDISQRKADEEKLETLATRDELTGLINRFSYNHLLKKEVALAKRHME 243 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G + +R L ++E++ + ++ G E L+++ G Sbjct: 244 SLAVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRESDTVARIGGDEFLIIMPGI 303 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + + + + +G + + + ++ L+ Q+ Sbjct: 304 KDVHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADTAMYQA 363 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 A + + K++ + +R A+++ L QP + G + + Sbjct: 364 KDSGRN-AYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEAL 422 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLM 580 L + G ++P F+ LI NL VL+ K R +VN Sbjct: 423 LRWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFA 482 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 Q ++ + + ++ ++ + + LEITE A ++ E ++ ++ L + G IAID Sbjct: 483 ARQFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAID 542 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ LKR DI+KID F+ +I DA IV +I+++A + + V+AE VE Sbjct: 543 DFGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVE 602 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T+ Q L G +QGYL RP P Sbjct: 603 TKYQLEFLRGHGCDMIQGYLFSRPVPPE 630 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 95/546 (17%), Positives = 192/546 (35%), Gaps = 27/546 (4%) Query: 206 PSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVF---FIIFTLGVGK 257 + + A + A +++ L I GY Sbjct: 557 AAEADLRLARQVFDNTAEGIVITDPAFRVLEVNQAYQQITGYDKEEIIGKLPSVMQAGLH 616 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHR 314 + + + + Y ++ + + + + Sbjct: 617 EAAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWLSISQVADAKGSVQNYVAVFTDITQ 676 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + R A D LT LPN L++ + + + +D + ++ Sbjct: 677 RKLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDT 736 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NS 423 G ++ + L ++E + + + G E ++++ L + + + Sbjct: 737 LGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLA 796 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + L + + + LL ++ + Sbjct: 797 QPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESGKN-TFRFYAAEANT 855 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLP 540 + + + L N +R A+++ + +L+ QP + G + ++ + G+++P +F+P Sbjct: 856 NSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIP 915 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L ++ + + R +VNL + + I Sbjct: 916 LAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTE 975 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 ++P + LEITE NAE + ++ H G + IDDFGTGY+++ LK D Sbjct: 976 SGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDS 1035 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DI + D I ++I +A + + VVAE VETQ+Q A L K G +QG+ Sbjct: 1036 LKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGF 1095 Query: 720 LIGRPQ 725 L P Sbjct: 1096 LFSEPL 1101 Score = 68.1 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 88/314 (28%), Gaps = 17/314 (5%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 ++ V + L ++ I ++ L L+IL +FG+R + G T+L Sbjct: 20 LSIIVFVYCLLGSLNLWIPIPDAWATLISPTAGFSLAILLVFGYRAWPAIFMGSLFTHLH 79 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 T + + ++ C + L R+ + L + I Sbjct: 80 ATVYYVAATMAVGDTLETLLAC------YLLKQVARFDPALIRLRDFLTLVFFAVGISPL 133 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 S + +T ++ + D S ++Y P Sbjct: 134 VSALINVLMLVVVGADTTALANSFTNSWLEDAFSYLLFTPAVLAFYHY------EPIRWS 187 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + G + L+ L A+ + L P + Sbjct: 188 WARVGEALILAGLVVFSCLLTMLGAMDKSMSQLMQPQAFMLFPLIMWAALRFHQRGAALS 247 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 + + + W + L + +F Q +Y + ++ ++ L RI + Sbjct: 248 VLFVAMTALWGGAH-GLGTFAHDFAQSNLLDYWMYVLVLSSTGVALSGLNAGRIRSEARL 306 Query: 318 LNRRWHLQALTDPL 331 + D L Sbjct: 307 KEQ----LDTYDAL 316 Score = 61.5 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 29/320 (9%), Positives = 69/320 (21%), Gaps = 11/320 (3%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILF-IFGWRGVVPVLC 69 ++ F V + L + + ++ + S L F + P + Sbjct: 117 LRDFLTLVFFAVGISPLVSALINVLMLVVVGADTTALANSFTNSWLEDAFSYLLFTPAVL 176 Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 + + + + A++L + + ++ + W Sbjct: 177 AFYHYEPIRWSWARVGEALILAGLVVFSCLLTMLGAMDKSMSQLMQPQAFMLFPLIMWAA 236 Query: 130 L-------VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 L + L G F + + L+ T V + + Sbjct: 237 LRFHQRGAALSVLFVAMTALWGGAHGLGTFAHDFAQSNLLDYWMYVLVLSSTGVALSGLN 296 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + A + E A L Y I Sbjct: 297 AGRIRSEARLKEQLDTYDALLHAQADVNEGVAIIHRGKIVYGNDALWRIGGYSPGDIPL- 355 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F +I ++ + + Y L + A S Sbjct: 356 GSDFFSLIHPSDRKRVSEIYQQRLQDMDVPT--RYEALGLGKNGRAIHIEIAAAQYRDDS 413 Query: 303 VCLLYMVRIYHRSEWLNRRW 322 ++ ++ + Sbjct: 414 QRIVTLIIDISSRKKAEAEL 433 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 97/560 (17%), Positives = 199/560 (35%), Gaps = 28/560 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF--- 248 ++ E+R T+ + + + L GY Sbjct: 111 ITARKKTEKALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMK 170 Query: 249 IIFTLGVGKLRYPF-LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC--- 304 I + + L + + +++ + + + Sbjct: 171 ITDVTHPDDIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLY 230 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 + +++ R + R A D LT L N +++ + L Sbjct: 231 TVPVIQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLD 290 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + +R L ++EN+ + +L G E +++LS + + L Sbjct: 291 LDRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPR 350 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + S + + + + LL + Sbjct: 351 VADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGD-T 409 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 ++ + ++ + +R AL+Q + + QP + + G + +L Sbjct: 410 FRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQL 469 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G++ P +F+ L + NL V+ + + + R +N+ +Q + Sbjct: 470 GVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDF 529 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + RL +P+ + EITE + ++++ +E L K G +AIDDFGTGY++ Sbjct: 530 VDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSL 589 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK L + +KID F+ D+ N D IV + +AK L V AE VET+ Q + Sbjct: 590 SCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQ 649 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 K +QG+ RP ++ Sbjct: 650 KRECDEVQGFYFSRPLSPSE 669 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 93/538 (17%), Positives = 207/538 (38%), Gaps = 28/538 (5%) Query: 217 LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + + +++ +L I+GY V R + N+ + Sbjct: 919 VFEQSREGIMITDSNQKILMVNEAFSEISGYSVEETLGKTPRMLASGRHSREFYQNVWKS 978 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILA---VLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + ++ + + + + + Sbjct: 979 IKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTEYVGIFNDISKVKESEEKIKHL 1038 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT L N L + + +D+ + ++ G + + Sbjct: 1039 AHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLI 1098 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 + + +L ++++ + + + G E ++VL E H+ + S Q++ L Sbjct: 1099 EVGQRILKILRDEDTIARQGGDEFIVVLPDTG-ENGAVHVAEKILESISDQLNLKPYKLF 1157 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + + + LL Q+ + +++ + + + Sbjct: 1158 ITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRN-VYRFFTMEMQAHSSRIMQIESA 1216 Query: 495 IRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL LY QP + G + ++ + G ++P +F+P+ Q Sbjct: 1217 LRVALFDQQFELYYQPQTCAKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAI 1276 Query: 552 DLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + ++ + K + +VNL + +++ +++++ + +SP+ + LE Sbjct: 1277 GWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELE 1336 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE A +N E+ + +++L G +++IDDFGTGY++ LKR + +KID F++D+ Sbjct: 1337 LTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDL 1396 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ D I+ +I L+KA L +AE VETQ Q L + +QG+ + Sbjct: 1397 AVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKALTPE 1454 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 122/743 (16%), Positives = 251/743 (33%), Gaps = 47/743 (6%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCV--MLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFL 84 ++ F S + + +L PL ++S L I +P+ F + +++ Sbjct: 4 ITSFFSTDGFMPHGHCYLWQPPLLWTYIISDLMIAVAYYSIPMALVYFVRKRPDLQFNWI 63 Query: 85 QTAVMLGSQ------TFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC 138 + + W + + V + W + + I Sbjct: 64 FVMFSIFIFACGTTHLLSLWTIWNPDYWADASMKAVTGVASLVTAIMLWRLMPQALRIPS 123 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 + L + ++ ++ D L L + Sbjct: 124 TRQLEETVERLEHEVEERELAERSLAAFNDTLETLV-----QQRTAELEEINRLLKLEID 178 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVL--------------LLLLCTPYENDFIAGYLV 244 L R +++RA V+ + + L+ Sbjct: 179 LRREAEQTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYLNPVAERMTGWSNAEAQGKPLL 238 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 VF I+ + P + L N+ + EY++ A + Sbjct: 239 EVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHTA-LIGRHGNEYAIEDSAAPIRDQDGN 297 Query: 305 LLYM---VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 +L + + + + A D LT LPN L + + Sbjct: 298 VLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALTIARRDQEFIALM 357 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D+ + ++ G + ++ + R L ++ ++ + + G E +++L Sbjct: 358 FLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEFMILLPELTNYFS 417 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + L + + + + F + E + L + + Sbjct: 418 PAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNADAAMYHAKSLGR 477 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 ++ + + L + +R A+++ + +LY QP + + G + ++ Sbjct: 478 N-NYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRWQH 536 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQ 586 G++ PD+F+P+ L L V+ + +VNL + L Q Sbjct: 537 PSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQLRQ 596 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N + + + P + LE+TE A + + +L G ++A+DDFGTGY Sbjct: 597 HNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGY 656 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKRL + +KID F++DI T+ DA I+ +I ++ L+V+AE VE Q Sbjct: 657 SSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLE 716 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K G +QG++ RP P + Sbjct: 717 FLKKEGCDQMQGFIASRPVPADE 739 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 86/460 (18%), Positives = 182/460 (39%), Gaps = 20/460 (4%) Query: 285 VETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 +Y + V ++ + + A D LT LPN + Sbjct: 344 SGNDYYITLSPIEENGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRTLFHEKL 403 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 +++ + +D + ++ G + ++++ L+ +++ + + +L Sbjct: 404 AEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRL 463 Query: 397 PGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E + L+G + + S I ++ + + + + + ++ Sbjct: 464 GGDEFAIFLTGVTHRE-AGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEA 522 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 LL + E + K++ L +R ALD+ L+ QP Sbjct: 523 LLKHADAAMYLAKEQGKN-NYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIH 581 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + ++ D G++ P +F+P+ + L V+ + + Sbjct: 582 LQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAG 641 Query: 571 K-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ +Q N+ I + + ++PQ + LEITE A N + ++ + + Sbjct: 642 FTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILNR 700 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G I+IDDFGTGY++ L + D +KID F++++ N + I+++I +A Sbjct: 701 LKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHN 758 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++V+AE VET + L + +QGY +P P + Sbjct: 759 MKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKE 798 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 20/65 (30%), Gaps = 3/65 (4%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWL 318 F +L +S + TEY L+ L ++ S + + + + + Sbjct: 66 FKSLWDTISRGKVWKGEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLM 125 Query: 319 NRRWH 323 Sbjct: 126 EESLA 130 Score = 43.8 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 12/141 (8%), Positives = 28/141 (19%), Gaps = 6/141 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I + + + + S +A ++ + I+ Y V Sbjct: 118 DITKRKLMEESLAKTMKDLHDIKNALDESSIVAITDDKGVITYVNDKFCEISRYEVDELV 177 Query: 249 IIFTLG--VGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 F L W + + TEY + + + Sbjct: 178 GNTHRVINSRYHSKSFFKLMWETIKQGRVWKGEVKNRAKDGTEYWMNTTIVPFLDDRGVP 237 Query: 304 -CLLYMVRIYHRSEWLNRRWH 323 + + Sbjct: 238 YQYVSIRTDITDRIEAETALA 258 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 111/564 (19%), Positives = 204/564 (36%), Gaps = 26/564 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAF--TLSWLAALSVLLLLLCTPYENDFIAGY 242 + I + + + S + T Y+ D + G Sbjct: 332 GTVQDISERKRTEAHLQLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGK 391 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F ++ + + Y ++++ Sbjct: 392 -----NPRILSAGTTPTEVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDED 446 Query: 303 VCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + R A D LT L N +L + + Sbjct: 447 GQIRNHIGSFIDISELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLA 506 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + + + L ++E++ + +L G E ++ L G + Sbjct: 507 LMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSP 566 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 H+ + + S L + G+ + LL + A+ Sbjct: 567 ADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKAN 626 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILAR 525 E ++ TT+++ L + +R A+ + + LL+ QP + G + ++ Sbjct: 627 GRG-NYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRW 685 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTL 584 G+++P F+P+ + + A VLE + L R S+NL Sbjct: 686 QHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQF 745 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 L K + RI L +S + LE+TE + ++ + S+ ++ L G ++IDDFGT Sbjct: 746 LDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGT 805 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK L +KID FVKDI ++ DA I LA L VVAE VET+ Q Sbjct: 806 GYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQ 865 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L +G + +QGYLI +P P Sbjct: 866 LKFLLSIGCEKVQGYLISKPLPAD 889 Score = 62.3 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 36/151 (23%), Gaps = 13/151 (8%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY---ENDFIAGYLVP 245 +I + R + E+R + A+ + Y Y Sbjct: 201 VIEGFIEDISVRRTTLEALEAAEQRYRNIFEHASEGIFQSTRDGHYLAANPALAKLYGYD 260 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCL-------LNYNQNFLQGVETEYSLAFILAVL 298 + T R ++ L L LN+ + + ++ V+ Sbjct: 261 NAQALMTDLADIERRLYVQPNRREEFLTLIEKNGAILNFESEVYRRDGSRIWISENAHVV 320 Query: 299 ISFSVCLL---YMVRIYHRSEWLNRRWHLQA 326 + V+ + L A Sbjct: 321 FGPQGEFICYEGTVQDISERKRTEAHLQLMA 351 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 122/759 (16%), Positives = 256/759 (33%), Gaps = 37/759 (4%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + + I+++ F + L + + +I S + + + + Sbjct: 47 LMFGATTMGLGIWSMHFVGMLALTLPIKVLYDMEYVILSVILAIFVSSIALFTITKRNLH 106 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL---- 116 R + M ++ + + T +V+ + I Sbjct: 107 ARQLGIAGILMAAGISGMHYVGMAAMMIEITYDTRIVILSIMIAATASAAALWLLFYFRR 166 Query: 117 -TSRYVWQRLFWLGLVTPIGIKCSMYLVG--SFFDFPLKISTFFGDADAIFTVVDLLSLF 173 S+Y + L+ I Y + F + + G ++ ++ L Sbjct: 167 DQSKYAYLYKLGSSLIMGAAIAGMHYTGMVAAHFYGTEQPTKQVGTQIEPESLAYIIVLA 226 Query: 174 TAVLIYNMLFYYLTRMIVS-----PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 T +LI LF +S ++ +R + T + ++ + Sbjct: 227 TFLLIGITLFGLFINKRLSQKDTVIQESESWYRSLYKNNEYGIISLDTGGCIIKMNPAVT 286 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + E +FI ++ + I + F N+ Sbjct: 287 KIGGLREEEFINQHVSKIRMHIVEEQRELTKDSFAQSF----APNRNNFETTIFHPNGNR 342 Query: 289 YSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 L+ + + V +V+ + + A D LT LPN R Q Q Sbjct: 343 VELSVLNVPVEIEGEVVGNHIIVKDITEENRVKEKIRYLAYHDELTDLPNRRKFNQVLHQ 402 Query: 347 E--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE-NEKLYQLP 397 + + + ID + ++ G ++ + + + + + ++ Sbjct: 403 SIEKSSQDSSSFAVMVIDIDRFKMINDSLGHSYGDIFLQGVSDRISKSAKGYHATIARMG 462 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++ + + + + ++ + F + L Sbjct: 463 GDEFTILCETGADGREAASLADKIIEALKQPFTLKDSEFYISASIGTAIFPDHGTDAVAL 522 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-- 512 L + + L Q + + + +R A+++ +L++Y QP Sbjct: 523 LKKADTAMYEVKKQGKNGHL-FYTTDFDAQLLENIEIERDLRKAIERKELVVYYQPQFHS 581 Query: 513 -NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + G + ++ G+++P F+P+ + L VL + + Sbjct: 582 ESNRMIGVEALVRWNHPTKGMLSPGVFIPIAEETGLIYEIGTWVLREACRQMKQWHDKGG 641 Query: 572 GP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVNL Q+N+ I + + ++P + LEITE + S+ + +L Sbjct: 642 PLIPVSVNLSSHQFHQRNLVQYIKNILEETKLAPHFLELEITESMMM-DPAVSISILHEL 700 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 +K G RI++DDFGTGY++ LK+ +KID F+ D+ N D IV +I +AK Sbjct: 701 NKIGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRSFITDLSRNENDKAIVATIISMAKHL 760 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE +ET+ Q +L + + +QGY RP + Sbjct: 761 KLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPLSANE 799 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 115/568 (20%), Positives = 211/568 (37%), Gaps = 28/568 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY 242 R ++ + + ++A T+ V++ +L I+GY Sbjct: 489 RELIDECACIAGLAVTRVRADTRLRQAATVFESTREGVIITDLEGRILDVNRAFTEISGY 548 Query: 243 LVPVFFIIFTLGVG--KLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFIL---A 296 P + + + F W ++ T + Y + A Sbjct: 549 SEPEVLGRNPSLLRSNRQDHAFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVA 608 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + ++ + + R DPLT LPN R ++ Q Sbjct: 609 DSQGRPSHYVGVMTDISQLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGG 668 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G + + R L ++E++ L +L G E L++L Sbjct: 669 RVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENL 728 Query: 409 ETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + L S + H N L +G + + T+ L+ Q Sbjct: 729 QRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQ 788 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + ++ +++ L + AL + +L+ Q + G + Sbjct: 789 AKEEGRN-TYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEA 847 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 ++ G++ PD+F+PL + L VL + +VNL Sbjct: 848 LVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLS 907 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L ++ R+ R+ + + + + LE+TE E ++ + L G R++ID Sbjct: 908 GRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSID 967 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKRL D +KID FV+DI ++ D I +I +A+ L+V+AE VE Sbjct: 968 DFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVE 1027 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T +Q L + G QGYL GRP P Sbjct: 1028 TPEQCDFLIRQGCTAGQGYLFGRPLPAE 1055 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 132/648 (20%), Positives = 244/648 (37%), Gaps = 35/648 (5%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + R F + + + + ++G L S F I ++ Sbjct: 277 YADPRPNHDVCRNFGMKGLFMLPLVSMGEVLGQISVVNLGDSNFSYSEGQIQLSQSIVDA 336 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQIL----WRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 + L + +I R I + + A + L Sbjct: 337 TASTLSNLLYMEKQEVIIEERTSEITFKNKELERVITELQQLSREKELILNSAGEGIFGL 396 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF---------LNLTWAVSTLCLLNYNQ 279 L AG + + I L F + L + + Sbjct: 397 DLDGNITFCNPAGASMLGYDIKNELIGKPSSMVFNGIEKGKKKQVASGCDEDWNLYDKTE 456 Query: 280 NFLQGVETEYSLAFILAVLISFSVCL--LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 F + ++ + + ++++ + + + + + + + + A D LT LPN Sbjct: 457 QFFRKDQSSFPVEYVISSIKEGTEIVGEVITFKDVTQRKQMEEEIKYHAYFDSLTDLPNR 516 Query: 338 RALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L+ Q + L +D +F++ G +R + L + + Sbjct: 517 VLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPK 576 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 + + + G E + L ++E + +VN + SR H + + M F Sbjct: 577 SATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPD 636 Query: 447 NQETLQPLLGQLSWLAEQSCA-HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 N +T + L+ +S + E + +T + + L N + AL+Q +L+ Sbjct: 637 NGDTTEILVKNADTAMYKSKEISG--SSYHFFSEGMDTRTFESIKLENDLYKALEQEELV 694 Query: 506 LYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 +Y QP N + EG + ++ + G++ PDKF+P+ + L VL+ + Sbjct: 695 IYYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQ 754 Query: 563 LATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 L SVNL L Q ++ + + + +SP+ + LE+TE N E Sbjct: 755 LKKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTE 814 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 S++ +++L G +AIDDFGTGY++ LK+L +KID FV+D+ + DA I Sbjct: 815 STLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD--DAAITN 872 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I LAK +L V+AE VET++Q L +QGY RP D Sbjct: 873 TIITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAED 920 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 100/563 (17%), Positives = 208/563 (36%), Gaps = 27/563 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 +++ ++ + S E+ ++ + + + GY + Sbjct: 672 LLIDITDSKQSESQLKKLSRAIEQSPVSVVITDPEG---RIEYVNPKFTQLTGYTLEEVI 728 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 L + +L +++ + + + + ++ L S Sbjct: 729 AQNPRILKSGNLLPSVYDSLWKTITSGKEWYGELENKRKDGSIFWESASISPLFDESGKI 788 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + + + + +R A D LT L N L + + Sbjct: 789 INFIGVKEDITQRKLNEKRLEYMATHDGLTGLANRTLLYDHLEIALHQSQRSKKLVAVIL 848 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G ++ ++++ + L ++ + + +L G E +++L+ Sbjct: 849 LDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLGGDEFVVLLTDVRDTTAA 908 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + L + L + + + LL ++ A Sbjct: 909 GKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILLRNADIAMYKAKAEG-- 966 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 L ++ K + + N++R AL++ + LY QP G + +L Sbjct: 967 CGLYFYSHEMNEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHATGRIIGCEALLRWRHP 1026 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQ- 586 G++ P +F+PL + L + VL + + +VN+ Q Sbjct: 1027 QRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPPLTMAVNISARQFYQG 1086 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +N+ + +R + P + LE+TE +A ++ + ++ + G +++DDFGTGY Sbjct: 1087 ENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGY 1146 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+ D +KID F+ DI ++ A I+ SI +A L VAE VE Q A Sbjct: 1147 SSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLA 1206 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L+ G Y+QGYL RP P D Sbjct: 1207 LVANCGCNYIQGYLFSRPLPPED 1229 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 111/560 (19%), Positives = 199/560 (35%), Gaps = 34/560 (6%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---YENDFIAGYLVPVFFIIFTLGVGK 257 R E + + + + L + F + + Sbjct: 185 RLAEQALWASETYLNAILHYSPALISVKDLDGNVVLASDHFKHMADIDESGFVGKNVFDV 244 Query: 258 LRYPFLNLTWAVSTLC-----LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MV 309 W + + + + ++ + L + + Sbjct: 245 FPRDIAQSMWDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVCTIG 304 Query: 310 RIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + R + A D LT LPN + + Sbjct: 305 TDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALML 364 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L ID + ++ G +++I L +++ + + +L G E ++VL G + Sbjct: 365 LDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDV 424 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + N L SR + + + F + LL ++ Sbjct: 425 IFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKN 484 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKY 528 + ++ +LL N +R A++Q L LY QP + + G + ++ Sbjct: 485 NC-QFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHP 543 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + G+++P F+PL + L VL K K + +VNL P QK Sbjct: 544 ERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQK 603 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N G++ + + + + + LEITE A +A ++ + QL++ G +AIDDFGTGY+ Sbjct: 604 NFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYS 663 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+R +KID F+ DI + DA I ++I LA L VVAE VET+ Q Sbjct: 664 SLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEW 723 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 L G +QG+L +P Sbjct: 724 LRAKGCDQVQGFLYAKPMTA 743 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 95/520 (18%), Positives = 189/520 (36%), Gaps = 20/520 (3%) Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 L+ D F + + L + Sbjct: 54 TLMAVMGAQDLQDVLGKTDFDFNTPDNAQNYYQDDQTVIQSGQPLINRE-EPVVDRQSGR 112 Query: 288 EYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL---- 340 L + ++ L+ + R + + A D LT LPN Sbjct: 113 IRWLLTSKFPVFNDTGKTIGLVGIGRDITERKQSEEQIQYLATHDSLTALPNRFMFSKLL 172 Query: 341 ----EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 E A + + + +D + ++ G + ++ ++ ++ + +L Sbjct: 173 AVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMANRFRTCLRTSDIVGRL 232 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++L E+ + + + S + + + + + + E Q Sbjct: 233 GGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRVTASIGICLYPEDAEDEQA 292 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L+ ++ + ++ ++++L N +R AL++ + L+ Q RN Sbjct: 293 LMKNADIAMYRAKEEGKN-NYQFYSPDLKVRSLERLMLENNLRKALERHEFFLHYQAKRN 351 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + ++ + G ++P F+PL + L VL + Sbjct: 352 LKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQG 411 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VNL N+ I + ++P+ + +EITE +AE ++ + Sbjct: 412 LPPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTG 471 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 + G R+AIDDFG GY++ +KR D +K+D F++DI N D I +I + K Sbjct: 472 IKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKT 531 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 SL+V+AE VETQ+Q+ L QGY +P + Sbjct: 532 LSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEE 571 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 710 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 103/554 (18%), Positives = 201/554 (36%), Gaps = 30/554 (5%) Query: 205 APSLGKEKRAFT---LSWLAALSVLLLLLCTP--------YENDFIAGYLVPVFFIIFTL 253 E R + V++ IA + + Sbjct: 379 QRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGRHLSTLQ 438 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVR 310 + F + A+ + + Y L + + + + Sbjct: 439 TKQEKPISFQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVAIFS 498 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + +R + A D LT LPN + + +D +F Sbjct: 499 DITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKF 558 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + ++ + + ++ + + +L G E +++ + + + Sbjct: 559 INDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAISLITQKII 618 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S + + L + + + LL + Q+ Sbjct: 619 SACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKSCC-QFFTT 677 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 ++ T+Q+ L N +R AL + + LY QPI N + ++ + + G+++P+ Sbjct: 678 EINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVSVEALIRWVDPELGLISPN 737 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIR 595 F+PL + L VL++ R ++NL L Q + + R+ Sbjct: 738 TFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLSARQLEQTDFSERVSE 797 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + K+ + LE+TE + ESS+ + L K G R+++DDFGTGY+ LKR Sbjct: 798 ILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRF 857 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV+ I + DA I ++T +A + +V+A+ VET++Q L+++ V Sbjct: 858 PIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGVETREQLNFLNEIKVDE 917 Query: 716 LQGYLIGRPQPLAD 729 QGY I P P + Sbjct: 918 AQGYFISYPVPAEE 931 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 710 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 124/757 (16%), Positives = 266/757 (35%), Gaps = 54/757 (7%) Query: 10 NIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVP--- 66 + I+ + F + ++ H + L+ +P + + W P Sbjct: 66 GLGIWAMHFIGMLAF-----HLNDDVTYHLGIVLLSIVP---AVVASGLAFWIISHPETR 117 Query: 67 ---VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA----ILRWQLGTRWRYGLTSR 119 ++ G F ++ + ++ M + I+ + Y L Sbjct: 118 PIQLVFGAFLISVGVVSMHYIGMEAMQMNAILTYDPVMWVASAIVAFVASLVGLYILFYI 177 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 R W L + + I ++ + T A + + S A +I Sbjct: 178 PNVSRFHWRRLASSVLIGVAVS-GMHYVGMGAARFTPMEGAAKPVSDYAVDSTLLAYVIA 236 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL---------- 229 + M +S A + A S E + ++ A+ ++++ Sbjct: 237 ASVMTLFILMYISLRTA----SQLEAQSEELELKFESIIESASDAIIVADHNRTILQWNQ 292 Query: 230 ----LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 L ++ + +V + F + + + L+ Sbjct: 293 GATDLFGYTTDEMVGQSIVAIIPERFREAHERGMRRYEATGE--KRVIGQTVELIGLRKD 350 Query: 286 ETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 E + L + ++R + + + + DPLT LPN R Sbjct: 351 GVEVPIEMSLGTWKTDKGIFFSSIIRDISERKRIEAQINDLVYLDPLTGLPNRRLFSDRL 410 Query: 345 E------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + Q + + +DN + ++ +G + ++ + + +Q+ + L +L G Sbjct: 411 DALLGQSQSEQFALYYIDLDNFKVINDRFGHSIGDQFLKQVTTRIQSTIQKTDTLARLGG 470 Query: 399 SELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +++ ++ ++ N + G + +T + L+ Sbjct: 471 DEFIILSPDTKSNLAAHRAQELINVLHPPFELENEEVFTGASIGISLHPSDGDTAEELIK 530 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE- 515 ++ A ++ +++ L +R + +G+ ++ QP E Sbjct: 531 NADIAMYRAKADGKN-GYQFFTNELNESVSRRSNLSMALRKGIGRGEFTVHYQPQIQLET 589 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KG 572 G + ++ + G+++P +F+P+ + R VL + Sbjct: 590 EMVIGMEALVRWNHPELGMISPGEFIPIAEETGSIHRLGEFVLNEACRQNKAWQDASIPP 649 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VN+ + QK++ + R + Q + LE+TE +A+ ++ + +L Sbjct: 650 FRVAVNISAVQFAQKDLPEVVSRALAASGLEAQYLELELTESV-IQSADRAIETMHELVA 708 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++IDDFGTGY++ LK D +KID F K+I ++ DA +V++I +A L Sbjct: 709 LGVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTKNIESDEKDAALVKTIIRMAHELDL 768 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V+AE VET+ Q A L QGY RP P + Sbjct: 769 NVIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAEE 805 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 101/566 (17%), Positives = 199/566 (35%), Gaps = 22/566 (3%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 ++ + E+ + + W+ L + G Sbjct: 190 AITGAMALVQDITEKRKTDEVLRRFRFSIEQASEAIFWINDEGRFLF---VNDQACHSLG 246 Query: 242 YLVPVFFIIFTLGVGKL--RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV-L 298 Y + + + + + + + + + + L Sbjct: 247 YSASELESLHLWDIDPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSASQCL 306 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGK 350 + + VR + + Q+ D LT L N L+ +Q Sbjct: 307 FNNEENHVAFVRDITIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNT 366 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G + ++ L + + L +L G E +V++ Sbjct: 367 AVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNH 426 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + M + + N L + + + E + LL Q+ Sbjct: 427 PADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKK 486 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 E + + K + L +R AL G +L+ QP + + +G + ++ Sbjct: 487 QGGN-GFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVR 545 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT 583 D G+++PD F+PL + L VL + + +VNL Sbjct: 546 WNHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQ 605 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 LQ + I + + I P + LE+TE + + + +L + GF +++DDFG Sbjct: 606 FLQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFG 665 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L+R D +KID F+ D+ ++ A + S+ +A + + +AE VET++ Sbjct: 666 TGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETRE 725 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L +QGYL +P P D Sbjct: 726 QYAFLAMCECDSIQGYLFSKPLPAND 751 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 107/569 (18%), Positives = 195/569 (34%), Gaps = 28/569 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 M R I S + + + + I Sbjct: 937 MRMTGTNRNITSRKLIENELVLSSQVLNSMNEAVVVA------GLDYKIRSVNPAFSAIT 990 Query: 241 GYLVPVFFI--IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL--- 295 GY + L + R F ++ + + + Sbjct: 991 GYSERQITDKYLVHLAYKQQRELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQV 1050 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------ 349 + + + + + + A D LT LPN + Sbjct: 1051 IDIKGETSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRAN 1110 Query: 350 --KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + +++ + L ++E + + +L G E ++L G Sbjct: 1111 NIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEG 1170 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + L + + + + L+ Sbjct: 1171 VAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYH 1230 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + + ++ T+ VLL ++ A+ + +L L QP + G + Sbjct: 1231 AKSLGRN-NFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEA 1289 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLM 580 +L + G ++P +F+PL + + + V+ + LA +VNL Sbjct: 1290 LLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLS 1349 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L +I I + Q++ LE+TE N + S+ + +L G IAID Sbjct: 1350 ARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAID 1408 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR D +KID FV+DI + DA I +I LA + L+VVAE VE Sbjct: 1409 DFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVE 1468 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 TQ Q L G +QG+L+ +P D Sbjct: 1469 TQAQLNFLGLQGCDEVQGFLLSKPLSAKD 1497 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 102/602 (16%), Positives = 202/602 (33%), Gaps = 29/602 (4%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 + V ++L L ++ + L R I + R A Sbjct: 794 IGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVILHTLWRDISERRVTETRLRLLAAAFE 853 Query: 209 GKEKRAFTLSW--LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + T Y D + G + + Sbjct: 854 HSAEAIMVSDRDNRILEVNDAFCRLTGYAADEVRGS-----DPRLLSSGRTSAEEYRTMW 908 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWH 323 A+++ + + Y ++ + + + + Sbjct: 909 QAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKAAEEKIS 968 Query: 324 LQALTDPLTLLPNFRALEQAPE----------QEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 A D LT LPN L+ + + L +D + ++ G + Sbjct: 969 HLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGD 1028 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNN 430 + + L +++++ + +L G E ++VL+G + + + + SR Sbjct: 1029 ALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADAL-AAERVAGKILKALSRAYQIEG 1087 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 L F + E+++ L+ + + + ++ + + Sbjct: 1088 HALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGRN-NVQFFTASMNEAASDRRQ 1146 Query: 491 LLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 L + AL Q +L+ QP + + +L G++ P +F+PL L Sbjct: 1147 LEEDLHLALQQKQFVLHYQPQVDAQRRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLI 1206 Query: 549 ARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VLE+ + + + +VN+ Q + + + +P Sbjct: 1207 VPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPAR 1266 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LE+TE N ++ + + G ++DDFGTGY++ L RL D +KID F Sbjct: 1267 LKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAF 1326 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V + N DA+I ++I + ++ L VVAE VET+ Q+ L G QG+L RP Sbjct: 1327 VCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLA 1386 Query: 727 LA 728 + Sbjct: 1387 VD 1388 Score = 44.6 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 10/163 (6%), Positives = 34/163 (20%), Gaps = 29/163 (17%) Query: 214 AFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNL 265 + +++++ + + GY + +L Sbjct: 597 LLQAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDTYRSL 656 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRW 322 + + + + + +A +I L + ++ Sbjct: 657 WQTLLEGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADKLL 716 Query: 323 H--LQALTDPLTLLPNFRALEQAPEQEAGKSFC----CLRIDN 359 +A R E A + + + Sbjct: 717 QESEEAF---------RRLFEDA---KDPLLLLKDGSFIDCNR 747 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 99/567 (17%), Positives = 205/567 (36%), Gaps = 31/567 (5%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL---------LCTPYENDFIAGYL 243 + + K + ++ +++ L + + GY Sbjct: 316 RVYENRSLYLQLESRARKLQLYDRAIEESSNGIVICLADKTRDNPVIYANRAFSIMTGYS 375 Query: 244 VPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI- 299 F L + L + + + + LA + Sbjct: 376 HDEIIGLSPRFLLANDLAQPGLERLRNCMRHGGSARAILRNYRKDGSLFWNEVALAAVHN 435 Query: 300 --SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 + + + QA D LT LPN L E Sbjct: 436 EHGEIAHFISVFNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHTK 495 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + I+ + + +++++ + +L G E +++ + Sbjct: 496 LAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDIR 555 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E + L + ++ N + F + + L ++ Sbjct: 556 DERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRAK 615 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 ++ + +++ L ++R A+ L L+ QP + + + ++ Sbjct: 616 DVGRN-GFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALI 674 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPL 582 G+++P F+P+ + L V+E + LA + R ++N+ Sbjct: 675 RWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAY 734 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L + ++I+ + PQ++ +E+TE + ++ ++ L + G R+A+DDF Sbjct: 735 QLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDF 794 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR DI+KID FV DI + IV++I +LA +++VVAE VET+ Sbjct: 795 GTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETE 854 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L G +QGY +P P + Sbjct: 855 AQLEFLRTNGCDEVQGYYFCKPLPSEE 881 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 114/567 (20%), Positives = 194/567 (34%), Gaps = 28/567 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 F ++ I + R G + A + L + GY Sbjct: 265 FIHIVEDITERKNFEDNLRLSATVFEGSTEAIIITDARANI------LRVNSAFTAMTGY 318 Query: 243 LVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + + +S+ + + L + Sbjct: 319 ADHEVVGKNPRLLKSGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVR 378 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + R + R QA D LT LPN Sbjct: 379 NSEDKITNYVGISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRH 438 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G + ++ + + LL +E++ L + G E +++L Sbjct: 439 EFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESI 498 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + + + + E +Q LL ++ Sbjct: 499 RGAEDAAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRA 558 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 E +S +++ L +R AL + + +L+ QP N G + + Sbjct: 559 KDSGKND-YQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEAL 617 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 + D G++ P F+PL + VL + PR SVNL Sbjct: 618 IRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLST 677 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + N+ + R+ K +SP + LEITE N E ++ ++ L + G +AIDD Sbjct: 678 HQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDD 737 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR +KID FV+ I +N D I SI L K +L VVAE VET Sbjct: 738 FGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVET 797 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q+Q +L QGYL +P Sbjct: 798 QEQLTVLRNYQCDEAQGYLFSQPVDAD 824 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 13/157 (8%), Positives = 35/157 (22%), Gaps = 14/157 (8%) Query: 185 YLTRMIVSPHFAQIL--WRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYEND 237 R+ + + E++ A + + LL Sbjct: 131 LFMRIHSALALYRERVIRHHKTRELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLC 190 Query: 238 FIAGY----LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + G+ L+ F + + + L + + Sbjct: 191 EMLGFQERELIESSFPDLCVPENRDVHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKL 250 Query: 294 ILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQAL 327 L+ + + +++V + L A Sbjct: 251 TLSPMKDAAGVPKYFIHIVEDITERKNFEDNLRLSAT 287 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 127/687 (18%), Positives = 249/687 (36%), Gaps = 41/687 (5%) Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 +S+ L + + TR + RL G V + + Sbjct: 90 PVSWGTLPYRLQYLLRASRAFADLSLSESKTRALLSNLPDII-IRLHREGAVLDMQVGSY 148 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT----------RM 189 ++ +G + S A + + + + F + R+ Sbjct: 149 VFDMGEWLHSAEDGSYHLPSDIAALIGTRIDAALRGKGMQMLEFQWSRDPMCVRHWEARI 208 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL-----LLCTPYENDFIAG 241 + +L R+I +E + + + ++L+ ++ + I G Sbjct: 209 VPRDRQEVLLVVREITQRRQQENQLRLWAKVFEASNEAILITDANFRIISVNRAYETIMG 268 Query: 242 YLVPVFFIIFTLGVG---KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + TL VG + + NL + + E+ F + + Sbjct: 269 YREQDVLGVDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQV 328 Query: 299 ---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + + A D LT LPN L Q Sbjct: 329 TNSRGEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQG 388 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + +D + ++ G + ++ + L ++ + + +L G E +++ Sbjct: 389 EKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPR 448 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 TEG L + L + L + + + E L+ Sbjct: 449 VRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYL 508 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + ++ +T ++ L + +R+A+D GD L+ QP + + G + Sbjct: 509 AKEKGRN-NYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEA 567 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 ++ + G+++P +F+PL + L VL +K LA SVN+ Sbjct: 568 LIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNIS 627 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L Q + R+ + + + P A+ LE+TE + +S++ ++ L + GFRIAID Sbjct: 628 ALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAID 687 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ L+ L +++KID FV++++ IV SI LA+A +AE VE Sbjct: 688 DFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVE 747 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPL 727 T+ + +L G + +QGY RP P Sbjct: 748 TRAEFDVLQARGCRLMQGYFFARPMPP 774 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 107/601 (17%), Positives = 223/601 (37%), Gaps = 25/601 (4%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 F + G+ I V+D ++ + +L + R+ + ++A S+ Sbjct: 442 FGAPLVAPSGETIGIIAVMDKKAMDIEEWVKPVLGLFANRVALELQRQSTHKEMEMAASV 501 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNL 265 KE + + + L I GY ++ N Sbjct: 502 FKESAEAIVICDSEDKI----LRVNPAFYKITGYSQIEVVGQSPQLLQSDRPIQSMLHNR 557 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRW 322 A+ + + + + + + + ++Y+ + Sbjct: 558 EAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITERKLFEEHI 617 Query: 323 HLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 + A D LT LPN A E+A + + + +D+ + ++ G + Sbjct: 618 YNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDL 677 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT 431 ++ + +++ + + + G E ++LS T+ + L + ++ Sbjct: 678 LLQQVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSS 737 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + G F N +++ L+ ++ + ++ +++ L Sbjct: 738 EVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRN-CFQFYTKEMNQYAQERLEL 796 Query: 492 LNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R AL++ + +L+ QP + G + ++ D G+++P +F+ + L Sbjct: 797 ELDLRKALERDEFVLHYQPQFDPNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIV 856 Query: 550 RFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 V+++ SVNL L ++ + I+P + Sbjct: 857 PIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLE 916 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LE+TE N E ++ + + G ++IDDFGTGY++ LKR + +KID FV+ Sbjct: 917 LELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVR 976 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + D IV+SI +A A +L+V+AE VET +Q L + QGY RP A Sbjct: 977 GLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAA 1036 Query: 729 D 729 D Sbjct: 1037 D 1037 Score = 93.5 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 97/327 (29%), Gaps = 35/327 (10%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV 64 L +++ L TL+ V LS + + + W P + +S + IFG+R Sbjct: 4 EKLKHHLRYLALCATLSFVYY-LSGRLGLSLAFEQAGVSPVWPPTGIAISAVLIFGFRVW 62 Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 ++ G NL + LG+ ++ ++R + T Sbjct: 63 PGIMLGALLVNLSIALPFSAAILIALGNTLEAIVAGYLLIRCAERYPF----TQVNHTAW 118 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF-GDADAIFTVVDLLSLFTAVLIYNMLF 183 + ++ P+ + L + I L L+ L Sbjct: 119 FIAIAVMAPM-------FSATIGLVSLSMHNLIEASELGIVWSTWWLGDIVGALVIVPLL 171 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 +R + + G A + L +L + LL+ + L Sbjct: 172 -------------LTWFRPHESMNGGVPVMALWGTCLVSLGLALLIFSPWHTEYDPHQLL 218 Query: 244 VPVFFIIFTLGVGKLRY----PFLNLTWAVSTLCLLNYNQNFL--QGVETEYSLAFILAV 297 + + + + + + + ++ L F+ ++ +L + Sbjct: 219 IFMMLPLLIWTALRFHHRGSTLLVTVFSGIAISGTLVGYGPFVMESTNQSLLTLQASVGA 278 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHL 324 ++ + L+ + +NRR Sbjct: 279 IMVTILILIASQE---ERKRVNRRLLQ 302 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 707 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 103/570 (18%), Positives = 205/570 (35%), Gaps = 28/570 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAG 241 R ++ I W R I ++ + +++++ + G Sbjct: 120 LRAVIGQCMTSIKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTG 179 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + L +S + + Y + ++ + Sbjct: 180 YTSAETIGKKPHILKSGETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPI 239 Query: 299 IS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQE 347 + + + A D LT LPN + A Sbjct: 240 TNGNEQITHFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHN 299 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLS 406 + L +D + ++ G + +++ L + + + + + G E +++L Sbjct: 300 RLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLP 359 Query: 407 GPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + + L + F + + L+ Sbjct: 360 DIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDGRDTETLIKNADMAMY 419 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 ++ + Q +++ + N++R AL + + LY QP N + + Sbjct: 420 RAKEQGRSR-YHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLE 478 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNL 579 ++ + G++ P++F+PL L VL + T R +VN Sbjct: 479 ALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNF 538 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P Q + + ++ ++P + LE+TE N E ++ + +L G I+I Sbjct: 539 SPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISI 598 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ +K+L +KID FV DI TN DA I ++ +A++ L+V+AE V Sbjct: 599 DDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGV 658 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET +Q LL L +QGYL +P P+A+ Sbjct: 659 ETLEQMKLLDGLNCPEMQGYLFSKPLPVAE 688 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 106/568 (18%), Positives = 196/568 (34%), Gaps = 23/568 (4%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL-SVLLLLLCTPYENDFIAGY 242 + R + + Q L + E+ + A + ++ GY Sbjct: 506 AFGIRTLRARVEQQQLAATLELRNRAIEESTNAIVISHADRAADNPIIYVNPAFTVTTGY 565 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 F + + L AV LA + Sbjct: 566 GADEVLGRNARFLIDNDWDQPAVERLREAVREGGDARVTLRTYHKDGQLLWNEISLASIR 625 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + QA D LT L N L Sbjct: 626 DAQGEVSHFIAIFNDVTERVRYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGH 685 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G ++ R L ++ + + +L G E ++V+S Sbjct: 686 AVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRRGDTVARLGGDEFMVVMSDM 745 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E + + + + N + + + E LL ++ Sbjct: 746 SAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPRDGEAAATLLKHADVAMYRA 805 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 ++ + +++ L N++R AL+ +L L+ QP + G + + Sbjct: 806 KELGRNR-FQFYAPEMNERILERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEAL 864 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 + G+++P F+PL + L V++ + L +VN+ Sbjct: 865 IRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSA 924 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + + R + + P + +E+TE E +++ + +L G RI++DD Sbjct: 925 RQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDD 984 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY + LKR D IKID FV D+ T+ DA I I LA + + +V+AE VE Sbjct: 985 FGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVEN 1044 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + Q L + G +QG+L RP P A+ Sbjct: 1045 EAQLDFLRRHGCDEMQGFLFSRPLPAAE 1072 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 120/699 (17%), Positives = 232/699 (33%), Gaps = 52/699 (7%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQL--------GTRWRYGLTSRYVWQ- 123 N ++++ + V A + G T + + Sbjct: 449 AVNFGGMKMAWIGILDQVTGLVEPVASYGAGTEYLDNLHVSIDGHEPGGSGPTGIALRED 508 Query: 124 RLFWLGLVT--PIGIKC----SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 R FW P+ + Y G+ PL ++ Sbjct: 509 RPFWCQDFANDPVTAVWHERAAEYGWGASASIPLHCHGIVVGTLTLYA-------EEKNA 561 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT--LSWLAALSVLLLLLCTP-- 233 L M + FA + + E + S+++ L Sbjct: 562 FDEPARNLLLEMAMDISFALERFDAETERKKMSETLLKLSLAVEQSPNSIVITDLDANIE 621 Query: 234 ---YENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + GY + F + + ++ ++ + T Sbjct: 622 YANSNFTKVTGYSLDEVLGKNPRFMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGT 681 Query: 288 EYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA- 343 EY + +++ + + L + R D LT LPN L + Sbjct: 682 EYIESVLISPVSQVDGRVMNYLAIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERF 741 Query: 344 -------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + L +D+ + ++ G + + + + L +++ + + + Sbjct: 742 KYALSLAQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQ 801 Query: 397 PGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +L+L G E H+ L S+ + L + + E + Sbjct: 802 GGDEFILILPGT-DENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFET 860 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 L + + + + + L N +R AL +G L L+ QP Sbjct: 861 LSKNADTAMYRVKHDGRN-GFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQIS 919 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + +L + G ++P +F+P+ VL + +K L Sbjct: 920 TQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSG 979 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VNL Q N+ + + + + + LE+TE A + + ++ +++ Sbjct: 980 LPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDK 1039 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 LH G +++IDDFGTGY++ LKR + +KID FV DI + D IV +I ++A + Sbjct: 1040 LHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASS 1099 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +AE VET Q + L G +QGY +P P Sbjct: 1100 LGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAE 1138 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 96/547 (17%), Positives = 195/547 (35%), Gaps = 27/547 (4%) Query: 208 LGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLR 259 + ++ + ++L+ ++ + GY + G Sbjct: 655 EDALRLYASIFEHSGEAILIADQARHIIAVNPAFTNLTGYALDDIRGEEPTILAGGQASE 714 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSE 316 + + ++ + T Y ++V+ + + Sbjct: 715 ESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVLTHYVASFTDITERK 774 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + A DPLT L N +L+ ++ + L +D + ++ G Sbjct: 775 LAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLG 834 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + + + R L +++++ + +L G E ++VL+ + + L + Sbjct: 835 HALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPR 894 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 L + + + L+ + + + ++ Sbjct: 895 YRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRD-NVQFFTPEMNQSV 953 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 K++ + +R A++ G L+ QP N + ++ G+++P +F+P+ Sbjct: 954 LKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIA 1013 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL + L +VNL L + + R + Sbjct: 1014 EETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHG 1073 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + LEITE A + +S+ ++ L G ++IDDFGTGY++ LK L D +K Sbjct: 1074 LEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLK 1133 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 +D FV +I N D I + LA + L VVAE +ET+ Q+ LL ++QGYL Sbjct: 1134 LDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLF 1193 Query: 722 GRPQPLA 728 P P Sbjct: 1194 SAPLPAE 1200 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 99/568 (17%), Positives = 199/568 (35%), Gaps = 27/568 (4%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 F R I ++ R + A ++ + G Sbjct: 347 FFSVAARDISKRKQSEEKLRHLSQAVEQSPA---DVVITNAEGII---QYVNPRFSQVTG 400 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + +L +S + + + I++ + Sbjct: 401 YASKEVIGKKPSILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPI 460 Query: 299 ISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + R QA D LT LPN Sbjct: 461 RDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYN 520 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D+ + ++ G ++ L+ ++E + + +L G E +L+L Sbjct: 521 RKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPD 580 Query: 408 PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + + F ++ L+ + Sbjct: 581 LTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYR 640 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 S ++ + + + + + +R A+++ ++ ++ QP+ + G + Sbjct: 641 SKREGKG-VFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEA 699 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 +L G ++P++F+PL + L VL + + A+ +VN+ Sbjct: 700 LLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISG 759 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 ++ + + + P + LE+TE + + ++ I++L G AIDD Sbjct: 760 KQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDD 819 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG+++ L+R D +KID F+KD+ N DA +V+SI +A + SL VV E VET Sbjct: 820 FGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVET 879 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ L G QG+L RP P D Sbjct: 880 HGQREFLRLSGCHIAQGWLYSRPIPGKD 907 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 13/159 (8%), Positives = 37/159 (23%), Gaps = 14/159 (8%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYEND 237 M Y R + S ++ A S + + +++ + Sbjct: 210 MTTYGGHRAMQSVWRDISARKQAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEG 269 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA----------VSTLCLLNYNQNFLQGVET 287 A Y I+ + + + + A + L+ Sbjct: 270 AEAVYGFRQDEILGSPLSRLIPERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGE 329 Query: 288 EYSLAFILAVLISFSVCLLYM-VRIYHRSEWLNRRWHLQ 325 E+ + + + + R + + + Sbjct: 330 EFPVEYSVGRWREAGRNFFSVAARDISKRKQSEEKLRHL 368 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 129/771 (16%), Positives = 266/771 (34%), Gaps = 52/771 (6%) Query: 10 NIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYI---FLAWMPLCVMLSILFIFGWRGVVP 66 ++ L + ++ ++ L I+H + L + L L F R + P Sbjct: 51 HLGQIIWLLALFALFHGINEWLDLLNIVHGASPLLDALRGLILPFSFLPLLEFARRLLQP 110 Query: 67 VLCGMFCTNLWNFHLSFLQTAVMLGSQTF---------------VVLCACAILRWQLGTR 111 L L ++ + ++ + +L +LR+ Sbjct: 111 WLGRWASPWLLIVPIAVVVLTALISQLDWLAISVASRYAIGLPGALLAGIGLLRYSRTDE 170 Query: 112 WRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF--TVVDL 169 + L L + + S +F + + L Sbjct: 171 PWADHGRVRAALVVVGLALAIYGLLTGLIVPPLDIPLARSLNSQWFLEQTGVPVQLFRAL 230 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 +L I+ +L + H ++ + + + + AA +++ L Sbjct: 231 CALTAGAAIWYVLHTFEIGRERQLHQMASETQQALHQARQLGQEQQMILDAAADAIIGLD 290 Query: 230 LCT-----PYENDFIAGYL------VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + GY + +I G+ W + ++ Sbjct: 291 NRGRVTFSNPAATALFGYSAEELQGEDLHALIHLCKEGEAHPREECGLWRLLRFGGQYHS 350 Query: 279 --QNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTL 333 + T + + + ++ R + +A D LT Sbjct: 351 GHETLRHKDGTPLPVEMNGSAIDDEKGVVIGAVLTFRDISERLSYEQELERRAHYDELTG 410 Query: 334 LPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 L N L+ + L +D+ + ++ G + +I + L Sbjct: 411 LANRVLLKARLQQTTAQAHRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQT 470 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWG 442 +++E + + + G E ++VLS P+ + L + + + L Sbjct: 471 VVREADTVARHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVS 530 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F + + LL ++ L E ++ +K++ +L+ +R A+++ Sbjct: 531 LFPRDGTDVDTLLRNADAAMYRAKHLGRN-NLQFYSEEMNLSLSKRLRMLSQLRQAVERN 589 Query: 503 DLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 +L L+ QP + G + ++ + G+++P +F+PL + L VL Sbjct: 590 ELCLHYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREA 649 Query: 560 LKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + R SVNL + I + ++ ++P+ + LE+TE + Sbjct: 650 CRQGVAWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIA 709 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N + S+ + + G R+A+DDFGTGY++ L+R D+IKID FV D + N +A Sbjct: 710 NPQQSVQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAA 769 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR++ +A+ +AE ET + L + G +QGY I RP P + Sbjct: 770 IVRTVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGE 820 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 115/602 (19%), Positives = 219/602 (36%), Gaps = 32/602 (5%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 +A F D ++ + ML R V + +++RA Sbjct: 211 QTEARFLRADGSIVWARLNAAAMLDGLHLRGHVQTVEDISERKITEDALFEEKERAQVTL 270 Query: 219 WLAALSVL-------------LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 +VL + + T + + G + F I ++ L Sbjct: 271 NSIGDAVLTTNLKGDVTYLNLVAEMMTGWPREAAIGQPLSEVFRILNGTTREVAPNPAQL 330 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRW 322 + L + + E ++ A + + + + + S + + Sbjct: 331 AIRENRTVGLAADSILIHRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDVSESRAMALKM 390 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT LPN L + L +D + ++ G + Sbjct: 391 AHLAQHDFLTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQ 450 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT 431 ++ + L+ +++ + + + G E +++L+ E + L + Sbjct: 451 LLQQVAERLIVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGN 510 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 L + + + ++ + A+ ++ + +++ + Sbjct: 511 ELHVSLSIGISIYPDDGMDADTVMKNADTAMYHAKANGRN-NYQFFTTEMNTRAVRRLFI 569 Query: 492 LNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +R AL QG+ +LY QP + G + ++ + G++ P +F+P+ + L Sbjct: 570 EGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLI 629 Query: 549 ARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 VL + + SVN+ + K+ + + K + P + Sbjct: 630 VPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYL 689 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LE+TE +AESS +E L G ++AIDDFGTGY++ LKR + +KID FV Sbjct: 690 ELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFV 749 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 DI + DA IV ++ + K VVAE VET++Q A L L QG+L GRP P Sbjct: 750 HDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPA 809 Query: 728 AD 729 + Sbjct: 810 DE 811 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 115/581 (19%), Positives = 206/581 (35%), Gaps = 38/581 (6%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 A + + I A+ R+ T+ V++ + Sbjct: 240 AADGAALAGIGTVQDITDRKLAEQSLRQAA-----------TVFENTGEGVIIADAKNRI 288 Query: 230 LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + I GY + + V + Sbjct: 289 IAVNRAFTVITGYGPEEVIGRSPNLLRSGRHDAAYYDAMWRGVHEAGHWQGEIWNRRKNG 348 Query: 287 TEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + L+V+ + + + R + R A D LT LPN L Sbjct: 349 EIFPELLTLSVVRDHNGKVSHYVGVFSDISRMKETEARLQRLAHYDALTDLPNRVLLNLR 408 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + L ID + ++ G + + I R L ++ + L + Sbjct: 409 LAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLAR 468 Query: 396 LPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN-NTGLDMGYGAAWGRFDGNQETL 451 L G E +++L + + + ++ + +G + + + Sbjct: 469 LGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDA 528 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ Q+ ++ +++ L +R L++G+ +L+ QP+ Sbjct: 529 TQLISNADAALYQAKEAGRN-VYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPV 587 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 E G + ++ G++ P +F+PL + L VLES + Sbjct: 588 VALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLD 647 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + +VNL ++ + + R + LEITE +A+ ++ + Sbjct: 648 CGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLA 707 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L G R++IDDFGTGY++ LKR D +KID FV+DI + D MIV ++ +A Sbjct: 708 ALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAH 767 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET +Q A L LG + QGYL+GRPQ AD Sbjct: 768 QMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAAD 808 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/146 (8%), Positives = 31/146 (21%), Gaps = 3/146 (2%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 ++R + RR + A T SW + F Sbjct: 125 GISRDVTVFRETAEALRRSQENLERAQAVARTGSWYVDFVSGQMDWSAETCRLFGQAPGC 184 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL---AVLISF 301 + +F V + W + + + + Sbjct: 185 VPSYELFLSVVHPEDQALVEAAWRQAVARGDYDLTHRVIVGGEVRWVHERAEFRRAADGA 244 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQAL 327 ++ + V+ + + A Sbjct: 245 ALAGIGTVQDITDRKLAEQSLRQAAT 270 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 102/555 (18%), Positives = 200/555 (36%), Gaps = 26/555 (4%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVG 256 ++ + + + ++ GY Sbjct: 265 RKQSEEQLRIAAAAFESQTCMIITDANRVIQRVNRAFIETTGYSAEEAVGQTPRLLQSGR 324 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYH 313 + + + + Y ++ + + Sbjct: 325 HGADFYREMWETIHRTGAWQGEIWGRRKNGEVYPKWLSISAVVGTNGRVSHYIGTHNDIT 384 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + R + A D LT LPN L ++ + + +DN + ++ Sbjct: 385 ERKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFKTLND 444 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNI 420 G + ++ + L +++ + + +L G E ++VL+ E + + Sbjct: 445 TLGHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEAAQDTETVAEK 504 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + + F G + L+ Q ++ A A+ Sbjct: 505 ILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRN-AVRFF 563 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI-RNKEGEGYDEILARLKYDGGIMTPD 536 + + + + + + AL + LL+ Q + G + +L G+++P Sbjct: 564 DPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGERLTGAEVLLRWQHPQRGMVSPA 623 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRII 594 +F+PL + L VLE+ LA + +VN+ Q + +++ Sbjct: 624 EFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVL 683 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + ++ +PQ + LE+TE N E + + L G ++DDFGTGY++ LKR Sbjct: 684 GVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKR 743 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +KID FV+D++T++ DA I R+I LA + L V+AE VET+ Q+ L G Sbjct: 744 LPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSGCH 803 Query: 715 YLQGYLIGRPQPLAD 729 QGY RP P+ D Sbjct: 804 TYQGYYFSRPLPIED 818 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 14/139 (10%), Positives = 31/139 (22%), Gaps = 17/139 (12%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLL--------------LCTPYENDFIAGYLVPVF 247 R E R + ++L+ L + + + + Sbjct: 11 RLEQALRTSEARLHSFFDATPDALLISDAHGTITMANQQVEKLLGYVAAELVGKSIEDLV 70 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLL 306 F LR F A + + +E + L+ + + Sbjct: 71 PNRFKASHPVLRSEFTASPRARRMGNGMA--VKARRKDGSECDVDVSLSRIETDEGMFFA 128 Query: 307 YMVRIYHRSEWLNRRWHLQ 325 +R + Q Sbjct: 129 SALRDISERKRKEEELRRQ 147 Score = 45.8 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 16/153 (10%), Positives = 36/153 (23%), Gaps = 14/153 (9%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGK-EKRAFTLSWLAALSVLLLLLC----TPYE 235 M F R I + RR + ++ A L+ Sbjct: 125 MFFASALRDISERKRKEEELRRQNGVLSTIFQSFPGGITLFDADLRLVAFNDQFKALLDL 184 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-----YNQNFLQGVETEYS 290 D + P F + + Y + V+ + + ++ T Sbjct: 185 PDVLFEQPEPDFETLIRYNAARGEYGPGDPEQQVAAIIARTKKFVPHKIERVRPDGT--- 241 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + S L + + + Sbjct: 242 -SLSIRGVPLASGGFLSIYTDITDRKQSEEQLR 273 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 108/574 (18%), Positives = 192/574 (33%), Gaps = 24/574 (4%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 + R A ++ + + +S + Sbjct: 231 GFVTTYTDITARKRDKERLQLADKVFENSREAIVITDLGHRIVSVN---PAYTEITGIAA 287 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAF 293 + P WA V + ++ Y Sbjct: 288 TAAQGTCFRPGSDDGDSGEEGEGAGGPDSRTVWAIVGEHGSWSGETTGVRCGGQRYPRTL 347 Query: 294 ILAVLIS----FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 ++ + + + + A D LT L N +L Sbjct: 348 MINGVRDPETREITHFIAIFSDITARKRAEADIQHLAYHDTLTGLANRFSLTARLQLSVA 407 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + L +D + ++ G + ++ + R L ++E + + +L G E Sbjct: 408 EARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRDAVRETDTVARLGGDEF 467 Query: 402 LLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++VL G + H+ L ++ + T L F + L+ Sbjct: 468 VVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTELHTTASIGISLFPDDSADPAALMRNA 527 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 + A + ++ T ++ L +R A+ +G+ L+ QP + Sbjct: 528 DTAMYHAKAAGRAK-FQFYTDEMNRAATARLDLERKLRGAVARGEFELWYQPQFDSRHGH 586 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PR 574 G + ++ G++ P +F+PL + + VL + R Sbjct: 587 LTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPELR 646 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVNL L +K + + + P + LEITE N + ++ ++ L G Sbjct: 647 ISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEITESAVMDNPDEAVALLQALKNLG 706 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 RIAIDDFGTG+++ LK D +KID F+ DI + D MIV + LA LSV Sbjct: 707 VRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSV 766 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AE VE+ Q A L +LG LQG+ RP Sbjct: 767 IAEGVESAVQVARLRELGCDELQGFHFSRPVTAD 800 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 704 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 105/618 (16%), Positives = 216/618 (34%), Gaps = 24/618 (3%) Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + + + + + T + L + S Sbjct: 281 LSVFFATLISAGGVIIIFRYLTQRSLNTVLQMTEAAFRNTEPARYKPTLVSEFNILGHSI 340 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-LLLLCTPYENDFIAGYLVPVFFIIFT 252 + L ++ L ++ + ++GY + Sbjct: 341 VDLDHQRKESEKQLLLSSSVFDNAVEGIVITNLDGIIEQVNPACEAMSGYRLKELIGENP 400 Query: 253 LGVGKLRY---PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 + + + ++ + Y L ++ + + + Sbjct: 401 RIFRSDHHNSAFYQQMWQSLIEEGRWEGEVWNRRKNGEVYPLNVSISRCTNSAGIPSHYV 460 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + + QA D LT LPN + + + + L ID Sbjct: 461 AIFHDISEIKRSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLDID 520 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 N ++++ G ++ I LL ++ + +L G E ++++ E + + Sbjct: 521 NFKYINDSLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITVLC 580 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + F + +T + L+ ++ Sbjct: 581 RRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEAGKN-GYQ 639 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 + +++ L + AL + + +L+ QP + E G + ++ K DG + Sbjct: 640 LFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEALIRWQKPDGQL 699 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL-LQKNIA 590 + PD+F+P+ + L + D VL++ + + + SVNL + + Sbjct: 700 VYPDEFIPIAEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFAKDQELV 759 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 R+ + + + + + LE+TE S+ ES++ + QL G IAIDDFGTGY++ Sbjct: 760 QRVKNVLNKTGLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGTGYSSLS 819 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 +K A +KID FVKDI ++ D I SI L + ++ V+AE VE Q Q L + Sbjct: 820 YVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEEQTQIDFLKQ 879 Query: 711 LGVQYLQGYLIGRPQPLA 728 Q +QGY G+P Sbjct: 880 HRCQQVQGYFYGKPCAAE 897 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 104/553 (18%), Positives = 209/553 (37%), Gaps = 26/553 (4%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTL 253 E+R L A + ++ + + GY + F ++ + Sbjct: 288 LLYEERQKSEERYRYLFQNANDPIFIIDRELKFINVNRRAMDLFGYGLDEFVAMNMVDLV 347 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRI 311 ++ L S L + N ++ + + + +++VR Sbjct: 348 PEEQIPRIQGELKKMESMEALDKLSTNIRTKWGYSLNVEISSSPFVERNNVMGSIHIVRD 407 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 S+ + QA D LT L N ++ L +D + + Sbjct: 408 VTESKKMEDEIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDLDRFKSI 467 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G ++ I L ++E + + ++ G E ++++ + N + S Sbjct: 468 NDSLGHAAGDKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAIANKILS 527 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + L + + + E + LL + Sbjct: 528 SMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRN-NYQFYNPA 586 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 ++ +T ++V + N +R AL++ +L++ QP + G + ++ L + G+++P Sbjct: 587 LNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLHPELGLLSPGH 646 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + D VLE+ + + +VN+ + ++ ++ R+ Sbjct: 647 FIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRRPDLVDQVRRV 706 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P+ + LEITE A + E ++ ++ L AIDDFGTGY++ LK+L Sbjct: 707 LNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSSLSCLKKLP 766 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID F+ + T+ D IV +I +A L V+AE VE Q LH+ + Sbjct: 767 IRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFLHQNHCDQM 826 Query: 717 QGYLIGRPQPLAD 729 QG+L RP P D Sbjct: 827 QGFLYSRPIPAED 839 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 106/579 (18%), Positives = 210/579 (36%), Gaps = 19/579 (3%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 D++ T VL L + + + P A + L V Sbjct: 38 ACDIVRAETGVLTAINRQAGLLTFTAASGAWNQMMKGVTVPLRNGNICAALAACGTPLRV 97 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 L L + + ++ G++ + Q Q Sbjct: 98 DRLSLFCRESCELFQVVEMNTALLVPIFDEGRVAACIAAFR--MDKPFDQVDEQLLQQYA 155 Query: 286 ETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + ++ ++ + R A D LT LPN R Sbjct: 156 HSASAVLRNFRLMEDLRRHAAMLEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLR 215 Query: 346 --------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQL 396 + + L +D + ++ G + + ++ + L + E + + + Sbjct: 216 QSLALAQRHKRPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQ 275 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E ++ LS + + + L + + + + Sbjct: 276 GGDEFIINLSAISDVKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDA 335 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L+ ++ ++ + +++ L N +R AL++ + +L+ QP N Sbjct: 336 LVKNADVAMYRAKEQGRNNC-QLFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVN 394 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + + ++ G++ P +F+PL + L VL + + Sbjct: 395 VEHGQIACMEALVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAG 454 Query: 571 KG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + +VNL P L Q +++ + R+ ++P +++E+TE +AE ++ + Sbjct: 455 YPTMQVAVNLSPRQLRQGDLSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRR 514 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G RI+IDDFGTGY++ LK+ +KID FV++I +N D I ++ +AK Sbjct: 515 LDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKG 574 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +L VVAE VET +Q +L L +Y+QG+L P P Sbjct: 575 LNLGVVAEGVETVEQMEVLRALNCRYMQGFLFSEPAPAE 613 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 103/579 (17%), Positives = 202/579 (34%), Gaps = 32/579 (5%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSP-HFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 V + L + R AQ ++ A + + + LS Sbjct: 245 VRGVPLAEGGFVTVYTDISERRASAEREQLAQKVYSHTPAGIIFTDDQHRILSIN----P 300 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + + I + + + + + +S + Q Sbjct: 301 ATTEMTGYEPFELIGQTVFGLISLDEGISQKDFQ-------EQISMRGSWSSELEVTQKN 353 Query: 286 ETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + + + ++++ + R A D LT LPN AL Sbjct: 354 GSNFPAGARINRVDDPQSGLPAHYVWILADITERKQAEDRMRHIAQHDALTGLPNRLALL 413 Query: 342 QAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + + +D + ++ G + +R + L L++E + + Sbjct: 414 MRLAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFV 473 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E +++L + + + S I L F + Sbjct: 474 ARLGGDEFVIILPSISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPD 533 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 +L + A ++ +++ + +R A+ + +L L QP Sbjct: 534 GDIVLKNADTAMYHAKAAGRN-NYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQP 592 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + +L G+++P +F+P+ + + VL + +A Sbjct: 593 QFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWI 652 Query: 568 CDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 R +VN+ L +++ + + + + LEITE N + +++ Sbjct: 653 NAGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAIHI 712 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 +E+L + G +AIDDFGTGY++ LK D +KID FV DI + D I L Sbjct: 713 LERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIAL 772 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 A + L+V+AE VET+ Q LL G +QG+L +P Sbjct: 773 AHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPL 811 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 105/568 (18%), Positives = 196/568 (34%), Gaps = 23/568 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 F L + + R + E + ++ + + + Sbjct: 832 FEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPA 891 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 V + ++ ++ + Y + + Sbjct: 892 DVLDQQPRLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEE 951 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + RR H A D LT LPN + Sbjct: 952 GDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVV 1011 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G ++ + L + +++ + ++ G E L+L Sbjct: 1012 LMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDR 1071 Query: 412 G----RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 R + ++ +R + + L L+ Sbjct: 1072 EIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYH 1131 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDE 521 + + ++ + +++ L + +R AL+ G+ +L+ QP G + Sbjct: 1132 AKEMGKN-NFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEA 1190 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLM 580 +L G++ P +F+P++ + L A+ +L K L + K SVNL Sbjct: 1191 LLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLS 1250 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + RI + I P + LE+TE S+ +M + L + G IA+D Sbjct: 1251 ARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVD 1310 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK+ D++KID FV + DA I R+I +A + +L V+AE VE Sbjct: 1311 DFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVE 1370 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q Q L + G +QGYL GRP P Sbjct: 1371 SQAQLDFLREHGCDEVQGYLFGRPMPAE 1398 Score = 43.8 bits (103), Expect = 0.027, Method: Composition-based stats. Identities = 12/147 (8%), Positives = 31/147 (21%), Gaps = 25/147 (17%) Query: 206 PSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 +R L+ + + L + GY + Sbjct: 711 ALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWALLNGLHQTATNPR 770 Query: 261 PFLNLTWAVSTLCLLNYNQN-----------------FLQGVETEYSLAFILAVL---IS 300 L + + ++ L+ + + + ++ Sbjct: 771 QLGRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDCLRADGRKIPIELRIVLMWDEHD 830 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQAL 327 LL + R + R + A Sbjct: 831 RFEGLLGIARDISQQRRAERELRMAAT 857 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 107/568 (18%), Positives = 206/568 (36%), Gaps = 28/568 (4%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 L Y + R + + R+ + + T ++ + CT I G Sbjct: 457 LLYSIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCT------ITG 510 Query: 242 YLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 YL + R+ F + ++ + Y + + Sbjct: 511 YLAAEVIGRKSSMFKPERHEATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAV 570 Query: 299 ISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + QA DPLT L N L+ Sbjct: 571 RDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHG 630 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 L +D ++++ G + + + R L +++ + + +L G E +V+ Sbjct: 631 CKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHD 690 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 L + + L + F + + +Q LL + Sbjct: 691 LADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYK 750 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A + +V L +R A++Q L+ QPI + G + Sbjct: 751 AKQAGKNRA-QPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEA 809 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ + G+++P +F+P+ + L VL +++ R ++N+ Sbjct: 810 LIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVS 869 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + + + + L + + +++ EITE +E+ + + + G A+D Sbjct: 870 GVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALD 929 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ LKR DI+KID FV+D + DA +V +I ++A + L V AE VE Sbjct: 930 DFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVE 989 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +Q+ L LG YLQGYLIG+P Sbjct: 990 SAEQREFLRALGCDYLQGYLIGKPLAAD 1017 Score = 60.0 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 13/219 (5%), Positives = 49/219 (22%), Gaps = 14/219 (6%) Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 R + + + + + L + L ++ ++ + Sbjct: 12 RPLVVGIVVFLVAAMVSGVLVLGLGHPGDNLGLSLNAAVVLLFSLLLGGLANQMAQLRAH 71 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF---TLSWLAALSVLLLLL----- 230 L + + R + + E++ T + S+++ Sbjct: 72 RADLQRLVAARSAEVRAREAELDRAQSVAHVGEQQLRKLSTAIECSPASIVITDRSGTIE 131 Query: 231 CTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + + GY + + + ++ + ++ Sbjct: 132 YVNPQFERSTGYTAQEVVGKNPRILKSGNRSADEYAAMWATITHGHVWRGEFENVRKDGA 191 Query: 288 EYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWH 323 Y +A + + + + R Sbjct: 192 HYWERASIAPIRADDGMISGFVAVKEDITLQKRAERELR 230 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 103/569 (18%), Positives = 212/569 (37%), Gaps = 37/569 (6%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-------------LLCTPYENDFIAGY 242 + + +++ TL ++ +L++ + + + Sbjct: 236 LEKDIEKKTREINKQKETFETLFEKSSDGILIVDGSTFIECNEKMVEILKYDSKEKLLNM 295 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F + + +++ ++ L ++ Sbjct: 296 HYTSMVPKFQPDGRNSYEKSKEMVLLAKKYKGYQFECVYIRADGEKFLAEVTLTPIMLGK 355 Query: 303 VCLLY-MVRIYHRSEWLNRRW-------HLQALTDPLTLLPNFRALEQAPEQEAGKS--- 351 ++Y +VR + + H QA D LT LPN E + Sbjct: 356 RHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALTGLPNRTLFSDRLEHGLKLAERH 415 Query: 352 -----FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + +DN + ++ G + + + + L +++ + L +L G E +++ Sbjct: 416 LGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLKAKIRQEDTLARLGGDEFTIIME 475 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + ++ + + ++ +H L + + + + L+ Sbjct: 476 NFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGISFYPQDTQNANDLVKYADAAMY 535 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYD 520 ++ ++ ++V++ ++R A+ + +LY QP N G + Sbjct: 536 KAKEEGRN-NFQFYSTEMTTLAYERVVMEASLRQAIKNEEFILYYQPQVNAQTSRMTGME 594 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNL 579 ++ G++ PDKF+PL + L D V+ + +K + P S+NL Sbjct: 595 ALIRWEHPHLGMILPDKFIPLAEESGLILEIDRWVMRTAMKQVREWYARGLDPGVLSLNL 654 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L +N I P+ + E+TE Q + ++ ++ ++ G IAI Sbjct: 655 SMRQLKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQMMKRPDDAVASLGEIKSMGISIAI 714 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL +KID F+ I + +A IV++ LAK+ SLS++AE V Sbjct: 715 DDFGTGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENAAIVKATIALAKSLSLSIIAEGV 774 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E ++Q+ L G +QGY GRP Sbjct: 775 ENEEQKEFLLFNGCISMQGYYYGRPMTAD 803 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 106/572 (18%), Positives = 202/572 (35%), Gaps = 37/572 (6%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV---------------LLLLLCTPYEN 236 R A + E++ L+ + + L + Sbjct: 416 DRFEQDAERARLAAAIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGYAPH 475 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYSLAFI 294 + I + + + + + L + + Sbjct: 476 ELIDAPIERLLKPEYVAEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWAEVV 535 Query: 295 LAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA-------- 343 + ++ + R A D LT LPN ++ Sbjct: 536 TTLGLNRRSGRVEFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASLT 595 Query: 344 PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + +D+ + ++ G + + R L +++ + + +L G E + Sbjct: 596 QRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVF 655 Query: 404 VLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L + EG + L ++ + ++ L + + + L Sbjct: 656 LLPDTDAEG-AARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADA 714 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 Q+ E + ++T+ +LL N +R ALD+G L+ QP + Sbjct: 715 AMYQAKREGRN-GFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVV 773 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFS 576 G + +L + G ++P +F+P+ L A+ VL + + + Sbjct: 774 GAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMA 833 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL N+ + ++ + + P V LE+TE A + +S++ ++ L G R Sbjct: 834 VNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIR 893 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTGY++ LKR + +KID FV+DI + D IV +I LA + + VA Sbjct: 894 MSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVA 953 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET Q L + G +QGY RP P Sbjct: 954 EGVETLDQLDFLRQQGCDTVQGYYFSRPLPAE 985 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/254 (7%), Positives = 42/254 (16%), Gaps = 13/254 (5%) Query: 77 WNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI 136 L+ A + + + L + ++ W G P Sbjct: 11 HAPGLARSAPARVRALASALSLAFVLGTASAPVCALPPAVFQTHLDPGGDWSGKGHPGEG 70 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 L + + LL L +LF + + Sbjct: 71 GLLGALAH------VVGHDAAHALFSPVARNTLLGL---AGTGALLFGGVLLLRARVRAR 121 Query: 197 QILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 L + L + E + + + Sbjct: 122 TRELEGVNRQLGATLDAIPDLLFEMDGEGRYLAVH-ANREAQLQRPVEALLGRRVDEVLP 180 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA--VLISFSVCLLYMVRIYH 313 L + Q + +A + + R Sbjct: 181 APAAQTCLAALAEAGRHGWSSGQQIEITIDNQPQWFELSVARKADDGGPAHFIVLSRDIT 240 Query: 314 RSEWLNRRWHLQAL 327 + Sbjct: 241 ARRRAEASVQRLSR 254 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 117/653 (17%), Positives = 219/653 (33%), Gaps = 23/653 (3%) Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 C + + + G R L + LFW + + + Sbjct: 205 CTAMVSQMRTGGSMRRTLRCQRPDGSLFWNDVTLSPIFNERGEISQCIAVLADATALKES 264 Query: 159 DADAIFTVVDLLSLFTAVLIYNM-LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 + + L A + L R I + R ++ A Sbjct: 265 EQALRRSRDALERQVEARTENLTEVVRQLRREIEERTRVESALRLSEQRLANAQRIARLG 324 Query: 218 --SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL- 274 W A L + P + + G R L Sbjct: 325 HWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYERFLEMIPGDDRQRLQEAIARCLEHGLP 384 Query: 275 LNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + +E L ++ + L + R A DP+ Sbjct: 385 YEIDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDITERHDYQNRLRHLANFDPV 444 Query: 332 TLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN + + + L +D + ++ G MM +R L Sbjct: 445 TGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAERL 504 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 L ++E + + + G E +++L E + + R Sbjct: 505 LGCVREGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIG 564 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + E + L+ + A ++ + +++LL N + AL+ Sbjct: 565 ISLYPEDDEHPEDLVRHADSAMYLAKAQGGA-GYRFYTPDMNTRAMERLLLQNQLHQALE 623 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 G ++ QP + G + ++ + G++ P +F+P+ L VL Sbjct: 624 LGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLR 683 Query: 558 SLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + + SVNL P ++ G + R+ + + + LEITE Sbjct: 684 TAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLI 743 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + E ++ + ++ + G R++IDDFGTG+++ LKRL +KID FV I ++ D Sbjct: 744 IVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDD 803 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A I ++ L + L V+AE VET++Q + L + G +QG+ I RP P + Sbjct: 804 AAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGE 856 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 109/573 (19%), Positives = 214/573 (37%), Gaps = 20/573 (3%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 L + R + + ++ K + + + + + +++ Sbjct: 470 SLTSMQYQDHAYRSLRARDMSRRQQAEQQQRLAAKIFDTSSQAIVISDASNHIVMVNRAF 529 Query: 236 NDFIAGYLVPVF--FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 D + + + ++ + T Y Sbjct: 530 TDITGYSAQEAIGRQPSLLSSGRQPPAFYQKMWQQLAQRGHWAGEIWNRRKDGTIYPEWL 589 Query: 294 ILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 +++L + + + + A D LT LPN + Q Sbjct: 590 SISLLRDEAGQVSHHVALFSDISERKEQEAHIRHMAEHDFLTDLPNRALIHDRLAQAIRA 649 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + L +D+ + ++ G ++ + + L ++ ++ + + G E + Sbjct: 650 AARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRNGGDEFV 709 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L++ + + L R + L + F N LQ LL Sbjct: 710 LIVPELASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSELQELLVSAD 769 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 + A ++ Q +++ L N +R AL++ L L QP N+ Sbjct: 770 LAMYHAKAQGRNR-YQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRL 828 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G + +L + G+++P +F+PL + L VL+ + A R + Sbjct: 829 VGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVA 888 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ L Q ++ + R+ + + LE+TE +AE ++ +++ + G Sbjct: 889 VNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIH 948 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY++ LKR D+IKID FV ++ N DA IV +I LA+A + +A Sbjct: 949 LAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLA 1008 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VE+++Q L + G +QGYL GRPQ + Sbjct: 1009 EGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGE 1041 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 99/587 (16%), Positives = 217/587 (36%), Gaps = 24/587 (4%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 +F + + ++ + + + Q + + +R L+ Sbjct: 319 MAPLFRIATIEAVTAIMFLAAASIMMMLWWRRQQALYQASYYQQQLQHQMLSQRFDNLTR 378 Query: 220 LAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 A VLL+ ++ GY + L +L W + Sbjct: 379 FANDLVLLVDAQGQIIDANERALDTYGYPEDELKTFKLKDLCDLSQQECDLFWEQLKVEQ 438 Query: 275 L-NYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLT 332 + + + + + + L+ ++R + + QA DPLT Sbjct: 439 GVRFETMQFRQDGSTFPVEINARWIDLDRGHLVQAIIRDISERKAAEDQLVHQAYHDPLT 498 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN + + L +D + ++ G + + ++ + + Sbjct: 499 GLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLGHAVGDRILTTLAQRMQ 558 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 +++ + + + G E L++L + + L S+ + + + + Sbjct: 559 ETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQPVLIDGEEMCLTTSVGI 618 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + L+ ++ ++ +++ L N +R AL + Sbjct: 619 SVAPEDSIEVDQLIRFADTAMYRAKEKGRN-NFQFYTPDMNAHAGRRLQLENNLRKALQR 677 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 ++++Y QP + G + +L + + G+++P+ F+PL + + LE Sbjct: 678 QEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIGAWALEQ 737 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + + +VNL +N+ I ++ + ++ + + +E+TE Sbjct: 738 ACQQTVAWQKNHPELKIAVNLSARQFRNENLVDDIEQILNKTGLAARHLEMELTESLLME 797 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + ++ + +L K G +AIDDFGTGY++ L R D +KID FV + + Sbjct: 798 DVDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMSLDNNG-- 855 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I R+I L + LS++AE VE +Q+ LL +LG QGY RP Sbjct: 856 IARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFSRPV 902 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 107/597 (17%), Positives = 205/597 (34%), Gaps = 26/597 (4%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 D ++ +V +LF M L I + G Sbjct: 535 RQDGSELWAIVSTNALFNPE-GDYMGTLGLITDITKRKRTEQALYDSEKRLEGILNSLQD 593 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL---C 273 + W A L P + F ++ + L Sbjct: 594 VIWSADPKTRQSLYLNPAIQLVYGRPMEDFFRDPHLWLCMVHPEDQELVSHHLKLLEDKG 653 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDP 330 + ++ L ++ + + + + A D Sbjct: 654 STEVHYRIIRPDGETRWLHSRSRLVYDEQGKSLRIDGINSDITERKQAEEQLQYNATHDT 713 Query: 331 LTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN E + L +D + ++ G + +R I R Sbjct: 714 LTQLPNRLLFMDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIAR 773 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 L ++ ++ L +L G E ++L + + +R + + Sbjct: 774 RLQKSLRADDTLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNTS 833 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 +G E +L ++ A ++ + ++ L +R A Sbjct: 834 IGIALSNGEYEAASEILRDADTAMYRAKAGGKA-CYAIFDQQMHASAVSRLQLETDLRRA 892 Query: 499 LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ + L+Y QPI + + G++ ++ G++ P +F+P+ + L + Sbjct: 893 IERQEFLVYYQPIISLQHDTLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEWI 952 Query: 556 LESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 LE + L + + SVNL L ++ G I R+ + I A+ +EIT Sbjct: 953 LEQAAQQLKIWQTQYRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEIT 1012 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E N + + + L + I +DDFGTGY++ L R + +KID FV + Sbjct: 1013 ESILMENVQVAADVLIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMRP 1072 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 N ++ IVR+I LA + ++AE +ET+ Q A L +G + QGY +P ++ Sbjct: 1073 NDENSEIVRAIVSLAHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSE 1129 Score = 55.8 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 32/139 (23%), Gaps = 15/139 (10%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + E++ + + + + ++ I GY V + L Sbjct: 447 QANQKLAESEEKYRKIVETTNEGIWISDHHNKITFVNHQMSEILGYTVDKMMGMSLLTFI 506 Query: 257 KLRYP--FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRI 311 ++ + +E L + L ++ Sbjct: 507 DAAQLSLVEKSGQKTEQSLPGTHDLKLRRQDGSELWAIVSTNALFNPEGDYMGTLGLITD 566 Query: 312 YHRSEWLNRRWHLQALTDP 330 + + QAL D Sbjct: 567 ITKRKRTE-----QALYDS 580 Score = 42.3 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 11/137 (8%), Positives = 32/137 (23%), Gaps = 7/137 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 F + I + R SL A + L+ + + + +A Sbjct: 214 FIVIINAISDRQETERHRDRFFVMSLDLLCIAGFDGYFKTLNPVFERILGYSSRELLAQP 273 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + ++ + + L++ A + Sbjct: 274 FIEFIHPDDRSTSLAELANLRQGKETI------HFENRYRCRDGSYRWLSWTSAPYMEEK 327 Query: 303 VCLLYMVRIYHRSEWLN 319 + + R + + Sbjct: 328 LIY-AVARDITEEKKIE 343 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 102/583 (17%), Positives = 204/583 (34%), Gaps = 21/583 (3%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + + ++ + L S D L + L Sbjct: 232 AIRIQAISHGAFWLVGVAGILLIGRRSAGRLTEKALADEETRLAAHVFSNALEATLITDP 291 Query: 226 LLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 +L + GY + + A+ Sbjct: 292 KGRILRINPMFTELTGYGEAEVVGGNPRIIRSNHHDADFYAEIWQAIFRDGRWQGEIWNR 351 Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + + + + R R A D LT LPN Sbjct: 352 RKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDITEQVEAQRHILRLAHYDVLTDLPNRVL 411 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + L +D + ++ G ++ + L ++ + Sbjct: 412 FQDRLERAVVHALRHDRQAALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTD 471 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L + + + + I + + +G F + Sbjct: 472 TIARLGGDEFTVILDEISAANDASMVADKILASLHAPIFIDGRDVFIGTSIGISLFPIDG 531 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + LL Q+ A + ++ + ++ L +R A+++G ++ Sbjct: 532 TSGDELLKHADTAMYQAKAAGKGR-FNFYSAEMTKREEHRLELETALRQAVEEGQFQVHY 590 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP +N G++ ++ G+++P F+PL + +L R D+ V+ + Sbjct: 591 QPQKNLATNRVSGFEALVRWQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQ 650 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +VNL + + ++ ++ ++ + + + LEITE Sbjct: 651 WRDQGYDICMAVNLSGVNFSRDDLPEQVRQVLEDTGFPAENLELEITESFVIDLEVDQRE 710 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +++L G ++AIDDFGTGY++ LKRL + +KID FV+DI ++ D M+V SI Sbjct: 711 VLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIG 770 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A + L VVAE +E + Q A+L +QGYLI +P P Sbjct: 771 IAHSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIAKPMPAE 813 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 101/536 (18%), Positives = 203/536 (37%), Gaps = 25/536 (4%) Query: 217 LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + + + ++ I GY + + ++ + Sbjct: 855 VFEQGGEGIAITDAACNIVMINQAFTRITGYSEVEVLGRNPSLLASGRHDQAFYQSMWES 914 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS--VCLLYMVRIYHRSEWLNRRWHLQA 326 + +L + + Y +++ + + + + A Sbjct: 915 IESLGHWQGEIWNRRKDGSVYPEWLLISRVDGDGAPTHYIGTFIDITQHKEAEASIQRLA 974 Query: 327 LTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN LE+ + + +D + ++ G + + Sbjct: 975 HFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQ 1034 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMG 436 + L +++ + + +L G E ++VL + +G +L + L Sbjct: 1035 VAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKLLEVMAPAYRIEQHELTCS 1094 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 A + + E+ + L ++ A + ++ + + + N +R Sbjct: 1095 LSAGIAMYPADGESFEALSMSADTAMYRAKQSGRN-AYCFFTAEMQERSARNLQIENDLR 1153 Query: 497 TALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL+ G+L L+ QP ++ G + +L G+++P +F+P+ + L Sbjct: 1154 RALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGE 1213 Query: 554 QVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + + L + +VNL + Q ++ + R+ ++ Q + LE+T Sbjct: 1214 WVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELT 1273 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E A N +++ +++L G R++IDDFGTGY++ LKR + +KID FV D+ Sbjct: 1274 ESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAA 1333 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + D IV + LA+ L +AE VE++ Q A L G QGYL RP A Sbjct: 1334 DPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPA 1389 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/171 (8%), Positives = 34/171 (19%), Gaps = 12/171 (7%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 + T +L L+ +L ++ + + Sbjct: 250 IPFVLSPHTRYLGYALLAGSLVGALLLIWVVTLRRLVRQRTATLEATLDAIPDP------ 303 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVF-FIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 L L C D +A + ++ + L+ Sbjct: 304 LFELGLDG--RYHDCHTPRADLLAAPPDALIGRLLTDVLPAAAAATCLSALREAQATGHS 361 Query: 276 NYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWH 323 Q L + +A + + R + R Sbjct: 362 AGQQFELPLRGGNFWFELSVARKPTGVGREPRFVVLARDISERKRAEARLR 412 Score = 45.8 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 29/293 (9%), Positives = 58/293 (19%), Gaps = 17/293 (5%) Query: 46 WMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHL---------SFLQTAVMLGSQTFV 96 WM + +LS + ++ +W L + T + F Sbjct: 247 WMGIPFVLSPHTRYLGYALLAGSLVGALLLIWVVTLRRLVRQRTATLEATLDAIPDPLFE 306 Query: 97 VLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTF 156 + + RL L C L + F Sbjct: 307 LGLDGRYHDCHTPRADLLAAPPDALIGRLLTDVLPAAAAATCLSALREAQATGHSAGQQF 366 Query: 157 FGDADAIFTVVDLLSLFTAVLIY-NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 +L + F L R I A+ R + Sbjct: 367 ELPLRGGNFWFELSVARKPTGVGREPRFVVLARDISERKRAEARLRMATEATQLVFWELD 426 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 LS +L + + G + ++ L F + + Sbjct: 427 LLSDQLRYDTSMLQVLGLDHGED-PGSTGALMELVHPDHRAALTESFRAAMASAEPV--F 483 Query: 276 NYNQNFLQGVETEYSLA----FILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 ++ + L +V + + Sbjct: 484 SFEHQIVTHSGEGVWLQTRGRVAQRDAAGRAVLAVGTAMNITDRKRAEAALLR 536 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 103/582 (17%), Positives = 203/582 (34%), Gaps = 27/582 (4%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 ++L ++ + R A+ R S + Sbjct: 317 VALLVSLAQRVTVEIRAHRDRHGRQAAEAALRLRERAIECSANAVIISSAQVPE---FAI 373 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVE 286 + I GY + + + + + A++ + Sbjct: 374 EYVNPAFERITGYTAAEAIGRSSSFLLRNDHEQAGLYEIRAALAEKREGKAVLRNYRKNG 433 Query: 287 TEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + + +A + + + + + H A D LT LPN L+ Sbjct: 434 SLFWNDLYIAPVKDDEGKTTHFVAAMSDITPMKQYETTLHRLASHDVLTGLPNRALLQDR 493 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + +D +F++ G ++ I L ++E++ + + Sbjct: 494 LENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVAR 553 Query: 396 LPGSELLLVLSGPET--EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQET 450 L G E +LVL G ++ + + + + + + + Sbjct: 554 LGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGAD 613 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 LL +S ++ Q +++ + +R A++ +L+L+ QP Sbjct: 614 PTTLLAHADVAMYRSKELGRN-NFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQP 672 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + ++ G++ P F+ L + L VL++ + Sbjct: 673 QVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQ 732 Query: 568 CDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 R +VNL Q ++ I + + + + +E+TE ++ E ++ Sbjct: 733 DMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILT 792 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L G ++++DDFGTG+++ LKR D +KID FV+DI N DA IV SI L Sbjct: 793 LRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISL 852 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A L+V+AE VET Q +L G +QGY +P P Sbjct: 853 AHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSD 894 Score = 42.3 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 15/165 (9%), Positives = 38/165 (23%), Gaps = 18/165 (10%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 + + L L R + + + ++ T Sbjct: 22 ALASPLLNLLRRYATRRRAGFLADPATESLLAADKIVW---VLRIPDGQVIYASKTV--- 75 Query: 237 DFIAGYLVPVFFIIFTLGVGKL----RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + + G F+ L + + R P L L ++ + + + Sbjct: 76 EALYGSSPERFYANSRLWLENIAPADREPALELLGSILHEPQQTLRLRINRSDGSPRWIE 135 Query: 293 FILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHL-----QALTD 329 + + S + + L +A+ D Sbjct: 136 YHARFIPDTDGRSGHVKLIGTDITTRHHLEIALARSNRALRAIHD 180 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 115/647 (17%), Positives = 221/647 (34%), Gaps = 29/647 (4%) Query: 108 LGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVV 167 L R L + V + L P G + + + + +T + V Sbjct: 215 LIAHGRIILDRKPVLDTITRDILALPTGARAESVIHA--YVDGYQHATDRAHTYRVLLFV 272 Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 L L ++I + + + + + + + + + A+ + + Sbjct: 273 VALGLAGYLMIAILRLQRTSLALAGANEHLEERIQTLRLTESELHLYANVFTNASEGMAI 332 Query: 228 L-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 ++ I GY + + + + + Sbjct: 333 TDAQARIVAVNPAFTDITGYSIEEIHGRTPAVLASGRQDAAFYREMWATLGKRGQWQGEI 392 Query: 280 NFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + Y + + + + + R A D LT LPN Sbjct: 393 WNRRRSGEIYPEWLSITAITEGDGGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPN 452 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L+ + L +D + ++ G + +R + + L ++ Sbjct: 453 RLLLQDRLGQAILKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVR 512 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 E + + + G E ++VL E + + + L + + Sbjct: 513 ETDTVARQGGDEFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYP 572 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 G+ LL ++ A ++ + ++LL + +R ALD+ +L Sbjct: 573 GDGADPSMLLRNADAAMYRAKADGRN-GFQFYAADMNTHSLGELLLEHQLRGALDRNELR 631 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + EG + +L D G++ P +F+P + L VL + Sbjct: 632 LYFQPKVNAADGCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQ 691 Query: 563 LATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 L +VNL ++I + + + + LE+TE + E Sbjct: 692 LRAWIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLE 751 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 ++ + +L G +AIDDFGTGY++ L++ + +KID FV DI + D I Sbjct: 752 RTIATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIAT 811 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ LA L+V AE VET QQ L + G LQG+L G+P+P Sbjct: 812 AVIALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAE 858 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 102/563 (18%), Positives = 209/563 (37%), Gaps = 28/563 (4%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPV 246 + A + + + S+++ L GY +P Sbjct: 728 ERGAHLASLAIERAQTGAWLNKLSQAVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPE 787 Query: 247 FF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---S 300 + + +++ + + TEY ++ L Sbjct: 788 VMGKNPRILHSGKTTVETYAAMWTQLNSGQMWRGELINRRKDGTEYVELARISPLRHTDG 847 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSF 352 L + + + R A D LT LPN L+ + Sbjct: 848 RVTNYLSIKEDITEQKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAV 907 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L ID+ + ++ G + + + + + L+++ + L + G E +LVL + +G Sbjct: 908 LFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDEDTLSRFGGDEFILVLPDTDADG 967 Query: 413 RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 H+ + ++ + L + + + L ++ Sbjct: 968 -AAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDG 1026 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 + ++ +++LL N +R AL + L+ QP + + G + +L Sbjct: 1027 RN-NFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWY 1085 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL 585 + G ++P +F+P+ + L VL + ++ + ++NL + Sbjct: 1086 HPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFR 1145 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q ++ ++++ +++P + LE+TE A N ++ + LH G R++IDDFGTG Sbjct: 1146 QARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTG 1205 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L++ + + +KID FV+D+ + IV +I LA + +AE VET Q Sbjct: 1206 YSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQL 1265 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 A L G +QGY RP +A Sbjct: 1266 AFLRLQGCNEVQGYYFSRPLTVA 1288 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 60/238 (25%), Gaps = 25/238 (10%) Query: 116 LTSRYVWQRLFWLGLVTPIGIK---CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 LT R + V + ++ S L S +++ + VV + Sbjct: 178 LTERDMAGLFVNGAPVEGVSLREVMHSPVLTVSHQTPVFEMAGLMQASRYRHLVVVDDAG 237 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL--GKEKRAFTLSWLAALSVLL--- 227 L L + R+ + + L R++ E + + + L Sbjct: 238 LV--LGMVTLHKLMARIAATVMNEETLRRQESLEHSMHHAESQLRLIVKTIPDLIWLKDV 295 Query: 228 ---LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC---LLNYNQNF 281 L C P F + V + + F + L +N Sbjct: 296 EGVYLSCNPMFERFFGAIEADIVGKTDYDFVSREQADFFRAHDRAAMLADKPSINEEWVT 355 Query: 282 LQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 L + + + +L + ++ LT L N Sbjct: 356 FADDGHRACLETTKSPMFNAVGQLIGVLGIAHDITERLAAAKKIER------LTQLYN 407 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 123/586 (20%), Positives = 222/586 (37%), Gaps = 27/586 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA--FTLSWLA 221 V L L ++ I + + + Sbjct: 641 LVAVRLNGSLVTAANGEQLILFIVEDITEQERTVARVNLLAQVFQQSGEGITIMDANDII 700 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 T Y D I G F R + A+ Sbjct: 701 VDVNSAFTQITGYSRDEIIGK-----NCRFLEAERTDRSIDAQVRAALEQTGFWQGEVWD 755 Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 ++ +++++ + + + R H A D LTLLPN Sbjct: 756 RHKEGFDFPKWLMMSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRL 815 Query: 339 ALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 +L+ E + + + +D+ + ++ G + + + R L +M + Sbjct: 816 SLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGND 875 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E ++VLS + R+ + L ++ +N L F + Sbjct: 876 DIVARLGGDEFVVVLSDTDH-DRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTD 934 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 ++++ L+ ++ A ++ T++ + +R A+ +LLLY Sbjct: 935 GDSVEALMKNADMAMYRAKAAGRN-NYQFFTAAMNTLVTERQQIETGLRQAIACNELLLY 993 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + + G + ++ + G++ PD+F+P+ + ++ VLE+ L LA Sbjct: 994 YQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLA 1053 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 KG R +VNL L + I II + ++ + A+ LEITE A E + Sbjct: 1054 EWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQN 1113 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + +L + G +AIDDFGTGY++ LK L D +K+D FVKDI ++ DA I + Sbjct: 1114 AKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAAT 1173 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L+VVAE VE + Q LL +G +QGY +P D Sbjct: 1174 ISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 Score = 52.7 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 63/196 (32%), Gaps = 21/196 (10%) Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL---TRMIVSPHFAQILWRRDIAP-- 206 S+ GD ++ ++ LL+ T ++ M R+ + ++IA Sbjct: 486 SYSSLMGDTFSLSLLMLLLAFITCAVVGGMTLVSSGERHRIAEKVAEKTMALSKEIARSQ 545 Query: 207 -----SLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIAGYLVPVFFIIFTLGV 255 + E+R TL A + L L I GY + I + Sbjct: 546 TFQATLMESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLEELQAIDPWEL 605 Query: 256 GKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVR 310 +RY L T Y +++ ++ +++ + +L++V Sbjct: 606 TPIRYQSSETEQLERLKQTRRYGPYQKHYRHKDGQLVAVRLNGSLVTAANGEQLILFIVE 665 Query: 311 IYHRSEWLNRRWHLQA 326 E R +L A Sbjct: 666 DITEQERTVARVNLLA 681 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 129/735 (17%), Positives = 245/735 (33%), Gaps = 29/735 (3%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCG 70 + ++ + + F+SP I + V ++L F + G Sbjct: 1 MGVYCVMAGGFFYFSRFGLFLSPSQHILLLAA----LAAVVCYNLLLQFSRDRLA---RG 53 Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 N L + +V++ + + R VW GL Sbjct: 54 FRLLNFLQIILDLVLVSVLIHTSGGAASWFWPAYLFVTIEASFLIEDRREVWLVGGLGGL 113 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 + + + + P S D + +SL A + ++ M Sbjct: 114 LYGAVLVLEHLNIVPYVRMPFVGSELHHDHLYLLLTWLWVSLLNAAMAAIASYF----MT 169 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 V + + + + + + LL + + Sbjct: 170 VIRRETDAVREGEERLATFLDTANDLIHSVTPDGRLLYVNEAWQRTLGYSAEEADAVPFF 229 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL--YM 308 L L VS L F + L+ + + Sbjct: 230 DILHPDSREQCCAELQRVVSGDALSPMEAVFTAKDGRSVIVEGSLSCAHGGDESSVIWSI 289 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNL 360 R + + + A D LT LPN +Q + L +D Sbjct: 290 CRDITERKHAEEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLDLDRF 349 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + H ++ + + ++E + + ++ G E ++L +T ++ M Sbjct: 350 KIINDTLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILVNVDTVEDVKRMGQK 409 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + + L + F + + L L+ + + Sbjct: 410 ILKTLAAPFNIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRN-NVQFY 468 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + K++LL ++R ALD + +Y QP + K + ++ G+++ Sbjct: 469 SPQMDANADKRLLLETSLRKALDNREFRVYYQPKVDIVSKRITAMEALIRWDHPILGLVS 528 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+PL + L VL + R +VNL QKN+ I Sbjct: 529 PGEFIPLAEETGLIIPIGEWVLRAACFQNCEWVRQGIPPMRVAVNLSGYQFQQKNLLETI 588 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + ++ + LEITE N + ++ + QL G I+IDDFG GY++ LK Sbjct: 589 RGILDETGLTADLLELEITESVIMQNPDFAVSVLNQLRDLGVHISIDDFGIGYSSLAHLK 648 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R + +KID FV+D+ N+ DA I +I + + +L V+AE VET+ Q + L Sbjct: 649 RFSVNTLKIDKSFVRDVEINSADAAIATAIIAMGNSLNLKVIAEGVETEGQLSFLSDNKC 708 Query: 714 QYLQGYLIGRPQPLA 728 +QGYL P P Sbjct: 709 DEVQGYLFSTPMPPE 723 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 135/734 (18%), Positives = 260/734 (35%), Gaps = 47/734 (6%) Query: 41 YIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCA 100 + + + L+ + + R VVP + L V + A Sbjct: 70 SVSKVSLITSISLAAILAYIQRTVVPSSELLVWCLLMVLASLLRAALVYSPQTLRLDDAA 129 Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY-LVGSFFDFPLKISTFFGD 159 R Q + + L P + ++ L G + S Sbjct: 130 AVQARLQKFRIGVVVAGAVWGSAGLLLFPAHHPQYVMFLIFTLAGMTAGGVISFSADLVS 189 Query: 160 ADAIFTVVDLLSLF--------TAVLIYNMLFYYLTRMIVSPHF----------AQILWR 201 A A ++ L + + + YL MI S +I Sbjct: 190 AVAFSVLLSLPVAIRLFVTGDHLSEAMGVAVLLYLGFMIASIRRINQNICENIILRIEAA 249 Query: 202 RDIAPSLGKEKRAFTLSWLAALSV------LLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 E+R L + + L++ C + + + V + L Sbjct: 250 AREGKVRESEERYRLLLSHLPVGIFHYNTDLVITYCNDRLAELLHNSVEHVIGLDMKLVK 309 Query: 256 GKLRYP-FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 + P + +Y + Y + +V+ Sbjct: 310 DQAILPSLRKALEGERSNFEGHYLATYSDAEGWAYITCTPFHDHNGQIAGGIAIVQDITE 369 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRH 366 + + + A DPLT LPN R L + + + +DN + ++ Sbjct: 370 HKAAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALNDT 429 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS-----GPETEGRLQHMVNIL 421 G M +R + + L ++E + + +L G E +++L E + + + + Sbjct: 430 LGHDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGEKI 489 Query: 422 NSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + F G++ + LL + Q+ + + Sbjct: 490 LAMLGLPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQAGRN-TVRFFD 548 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPD 536 + + T +V L + ALD+ L+ Q + G + ++ + + G++ PD Sbjct: 549 QQMQDAVTARVALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALIRWMHPERGLVPPD 608 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRII 594 +F+ + + +L V+++ L T +VN+ Q + ++ Sbjct: 609 QFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVR 668 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +R+ I P+ + LE+TE N E ++ + L + G + ++DDFGTGY++ + LKR Sbjct: 669 ATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKR 728 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D IKID FV+DI +++ D IV +I +A+ L V+AE VET++Q+ L G Sbjct: 729 LPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCT 788 Query: 715 YLQGYLIGRPQPLA 728 + QGYL G+P P+ Sbjct: 789 HFQGYLFGKPVPVE 802 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 108/570 (18%), Positives = 214/570 (37%), Gaps = 28/570 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 RMI + H ++ + + + +L I GY Sbjct: 391 PLRMIGT-HTDITERKKIEQQLRIAATAFESQEGIVVTNENFNILRVNQAFIDITGYEAE 449 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---I 299 + + N+ ++ + + Y + + Sbjct: 450 EATGKKPNILKSGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEIYPEHLTITAVKDAD 509 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + M ++ + R A DPLT LPN R + Sbjct: 510 GQTTNYVGMFTDISVAKAASERIENLAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGA 569 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS----- 406 L +D+ + ++ G ++ + L ++E + + +L G E +L++ Sbjct: 570 LVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARLGGDEFVLLVENLSAN 629 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 E +++ + + + ++ + F+G+QE+ + LL Sbjct: 630 DVEAAHQIEAIGDKILMSLNQPYQLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMY 689 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDE 521 Q+ L + ++ +V L ++ A++Q LY Q N + G + Sbjct: 690 QAKKAGRN-TLRFFDPLMQETINMRVDLERELKKAIEQKQFELYYQVQMNSAGQPSGAEA 748 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNL 579 ++ + GI++P +F+P+ + L + VL L K ++N+ Sbjct: 749 LIRWRHPERGIISPIQFIPVAEETGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINV 808 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 LQ + A ++ + +HI + LE+TE N E ++ + L + G + ++ Sbjct: 809 SAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSL 868 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ + LK L +KID FV+D+ T+ + IV +I +A + L+V+AE V Sbjct: 869 DDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGV 928 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET +Q LL+ G QGY P + + Sbjct: 929 ETDEQLQLLNAHGCGNYQGYYFSEPLSINE 958 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 114/605 (18%), Positives = 221/605 (36%), Gaps = 20/605 (3%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR-MIVSPHFAQILW 200 + + L A + L Y + R I FA+ Sbjct: 146 IPLVVLTGLDDGHLASLALEEGAQDYLLKGEINARGLRRALRYAIDRKAIEEKLFAEQES 205 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R S+ + LS + T ++ + G + + + R Sbjct: 206 ARVTLNSIADAVISADLSGNITFLNSVAEKLTGWQQNEALGRPIADILKVVDEITREPRG 265 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEW 317 + + N ++ +E + A ++ + ++ + Sbjct: 266 STVERPNQLHRSTKAPSNSILVRRDGSELPIDESRAPILDRQGQIAGTVTVLHDVSVTRA 325 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGL 369 + + A D LT LPN R L+ Q + + ID + ++ G Sbjct: 326 MELKMAHLAQHDFLTDLPNRRVLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGH 385 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QI 426 M ++S+ L ++ ++ + + G E +++L+ T + + S Sbjct: 386 GMGDKALQSMAERLTTCVRASDTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPH 445 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 L + + + + L+ Q+ ++ + Sbjct: 446 RIGRHELQISASIGISTCPNDADDAETLIKHADIAMYQAKEKGRN-NYQFFRADMNERVL 504 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++ L +++R AL++ + LL+ QP N G + ++ + G++ P F+ + Sbjct: 505 QRQSLESSLRLALERQEFLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAE 564 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L VL+ + + +VN+ + +K+ +I + + Sbjct: 565 DCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDL 624 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 P+ + LE+TE AE ++ + L G ++AIDDFGTGY++ L RL D +KI Sbjct: 625 DPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKI 684 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV D+ T T +A IV +I + K+ +L+V+AE VETQ+Q ALL QGY Sbjct: 685 DRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFS 744 Query: 723 RPQPL 727 RP + Sbjct: 745 RPVSV 749 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 106/575 (18%), Positives = 200/575 (34%), Gaps = 27/575 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYE 235 +L + H A ++ S A + + V++ +L Sbjct: 273 ILSGMELAYVHELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDAHARILSVNPA 332 Query: 236 NDFIAGYLVPV---FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + GY + + + + + Y Sbjct: 333 FTRMTGYAPEEVVGLNPSVLNSGRQSPAFYARMWDGLLGDGQWQGEVWNRRKTGEVYPQL 392 Query: 293 FILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 + + + R + R A DPLT LPN R L+ Sbjct: 393 LHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLLDDRLQVELA 452 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G + + I L +++++ + ++ G E Sbjct: 453 HAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMGGDEF 512 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 L+VL+ M + R ++ L + + + L+ Sbjct: 513 LVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHA 572 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 ++ + E ++ ++ +++ L + AL + +L LY QP+ E Sbjct: 573 DVAMYRAKDEGRN-SFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAEGGE 631 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPR 574 + +L D G+++P F+PL L VL S + Sbjct: 632 LVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLH 691 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 VN+ ++ A + + ++P + LE+TE + + ++ ++ L G Sbjct: 692 MMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALG 751 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +AIDDFGTGY++ LKR D +KID +FV+ I NT DA +V +I L + L V Sbjct: 752 VCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRV 811 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET +L + G QG+ P P + Sbjct: 812 VAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEE 846 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 104/562 (18%), Positives = 209/562 (37%), Gaps = 25/562 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 R I +++ ++ + + ++ L Sbjct: 459 AIRDISDRKQSELFLKKLTHGIENSASAV-----VITDTQGVIEYVNKKFIQLTGFSLEE 513 Query: 246 VFFIIFTLGVGKLRYP--FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---S 300 + + P F++L + + + Y ++ L Sbjct: 514 AVGKNPRILKSEATPPEVFVDLWKTILSGREWRGELLNRRKNGEVYWSITSISPLRNDSG 573 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + V + + A DPLT LPN R L+ + + Sbjct: 574 EITHFIANVEDINERKNAEATIEHLAYFDPLTDLPNRRMLQDRLELALRRSRRHGSNVAL 633 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D+ + ++ G ++ + ++++++ + +L G E L+L + Sbjct: 634 MYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDDVVCRLGGDEFALILHDIHQDQ 693 Query: 413 RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + L ++ + + + + F + ++ L + Sbjct: 694 DVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDGGDVKNLEKHADIALYHAKEEG 753 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 E ++ + ++ L +R A ++ +L L+ QP + + G + +L Sbjct: 754 KN-TFRFYLEELNSTISTRIALEQGLRYAKERQELELHYQPKVCVASGKVSGVEALLRWH 812 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 D G+++P +F+PL Q L VL + +VNL + L Sbjct: 813 SPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQWREQGLLLNMAVNLSAIQLKS 872 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + R+ + I P+ + LE+TE +N + + +E+L G I+IDDFGTGY Sbjct: 873 PGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQLLERLRTLGCSISIDDFGTGY 932 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK I+KID FV+D+ N+ D I RS+ DLA + VAE VE+++Q Sbjct: 933 SSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVDLANNLDMKTVAEGVESEEQLT 992 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 +L ++G Y+QG++ RP Sbjct: 993 ILQQIGCTYIQGFIYSRPVQAD 1014 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 123/633 (19%), Positives = 238/633 (37%), Gaps = 29/633 (4%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 R F + + + ++G L+ FF + ++ + L + Sbjct: 297 RNFGINGLVMFPLISMGEILGQISIVNLENKLFFYSETQLQLAQSIVDTTASALSNQLYM 356 Query: 184 YYLTRMIVSP----HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTP 233 +I R +A + + A + + C P Sbjct: 357 EKQEIIIEERTSEVRDKNKELERVVAELQQLSREKELILNSAGEGIFGLDLDRNITFCNP 416 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + + N+T + N + F + + + + + Sbjct: 417 AGALMLGYETDRELIGQSVEIIMSGCEAEDNMTVSPFLNANFNSYEVFFRKDHSNFPVEY 476 Query: 294 ILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 + +++ V + + + + L + A D LT LPN L Q Sbjct: 477 VTSLIKEGDKVVGEVITFKDITQRKQLEEKIKYHAYFDSLTDLPNRVLLIDRLTQGLKYA 536 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G ++S+ + L + E+ + + G E + Sbjct: 537 KVNGEKLAVLYLDLDRFKLVNDSLGHSYGDLLLQSVAKRLSACVPEDATVSRQGGDEFTI 596 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 L + E + ++N + S+ + + + + F N +T + L+ Sbjct: 597 YLPNIKCENDILKVINCINASFSQPFNLIDNEIYIKTSIGISLFPKNGDTTETLIKNADT 656 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 +S + E + +T + + L N + AL++ +L+++ QP N + + Sbjct: 657 AMYKSKET-PGTSYHFFSEGMDTRTFESIKLENDLYKALERDELIIFYQPQINYKTNKIK 715 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 G + +L + G++TPD+F+PL + L VL+ K L S Sbjct: 716 GVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEWVLKEACKQLKEWHNQGYPLISMS 775 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q N+ I + +SP+ + LE+TE N E ++ + QL+ G Sbjct: 776 VNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLELTENLIVKNTEVTLKTMTQLNGLGVN 835 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ LK L +KID FV++++T+ A I +I LA+ L V+A Sbjct: 836 LAIDDFGTGYSSLGYLKNLPISTLKIDKSFVQEMLTD-DAAAITNTIITLAQNLKLEVIA 894 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L + +QGY +P + Sbjct: 895 EGVETKEQADYLLEQNCHLMQGYFFSKPMKAGE 927 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 105/567 (18%), Positives = 207/567 (36%), Gaps = 28/567 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLV 244 +++ + K+A + V++ L I GY Sbjct: 545 LINEFALLTALAVQKVYAAESLKQAAAVFESTREGVVITDLQPRIVAINRAYAEITGYSE 604 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--- 298 + + + +++ + Y ++ + Sbjct: 605 EQVLGKNPRIIKSGRHDKLFYQAMWASLTKAGYWRGEVWNRRRSGDIYPQWLTISTVFND 664 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGK 350 + + + + + R A D LT LPN A+E+ Sbjct: 665 RNEPCNYVGVFTDITQIKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQI 724 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G + + + L ++E + L +L G E L+VL + Sbjct: 725 AALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKD 784 Query: 411 EGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + L + + + + F + ++ L+ + Sbjct: 785 SNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAK 844 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 + +S ++++L +R AL G+ +L+ QP+ + + G + ++ Sbjct: 845 QEGRN-TYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALV 903 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPL 582 D +++P KF+P+ + L VL + +VNL Sbjct: 904 RWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVR 963 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 +N+ I ++ + + + LE+TE +AE S+ ++ L G R++IDDF Sbjct: 964 QFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDF 1023 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID FV + + D I +I +A+ L V+AE VE++ Sbjct: 1024 GTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESE 1083 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 QQ +L++ G Y QGYL RP P + Sbjct: 1084 QQLDILNQHGCDYYQGYLFHRPVPAQE 1110 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 99/563 (17%), Positives = 196/563 (34%), Gaps = 27/563 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL--CTPYENDFIAGYLV 244 R I + R + + + + Y ++ + G Sbjct: 356 VRDITRYKQEEATLRLAARVFDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEVMGK-- 413 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--- 301 + + ++ Y + + Sbjct: 414 ---NPRMLSSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSITAVRDEHGK 470 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 V + + R + H A D LT LPN L + S Sbjct: 471 VVNYISIARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLI 530 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D ++++ G + ++S+ + ++E + + +L G E +++L E Sbjct: 531 FLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLRE-AGESA 589 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + L + + + + + L+ ++ Sbjct: 590 ASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGR 649 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 ++ + + +R AL++G+L L QP + G + ++ Sbjct: 650 N-NFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDH 708 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQ 586 G ++P +F+P+ + VL + +A +VNL L Q Sbjct: 709 PVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQ 768 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++A I + + + + LEITE + +++ + ++ G +++IDDFGTG+ Sbjct: 769 PDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGF 828 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK++ + +KID F++DI T+ DA I+RSI L +L V+AE VETQ+Q Sbjct: 829 SSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLD 888 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L G +QGY RP D Sbjct: 889 FLRIRGCDEIQGYFYSRPLLAED 911 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 109/566 (19%), Positives = 187/566 (33%), Gaps = 23/566 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 R I + R+ A + +L + Sbjct: 773 LMGFFRDITERKQTEDALRQGAAVFESSHNG---IIITDLDGHILAANQAYADISGYTES 829 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--- 299 + + R + + + + Y ++ + Sbjct: 830 ELLGQNPRILNSGRQSRDFYRKMWANIKEAGSWQGELWNRRKNGEIYPTWLAVSAVRNDQ 889 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + + A DPLT LPN L Sbjct: 890 GKATHYVGISSDLSQLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHHNQVG 949 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + + ++ L M+ + L +L G E LLVL Sbjct: 950 VLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSEDLLARLGGDEFLLVLEHINEP 1009 Query: 412 GRLQHMVNILN---SRQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + L ++ + + +G F + ++ + L+ Q+ Sbjct: 1010 EDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKT 1069 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 E +S + + + L N +R A+ L +Y QP + G + ++ Sbjct: 1070 LGRN-TYHFYTEDLSRASNEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAEALVR 1128 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 + G++ P +F+PL + L VL+ +VNL P Sbjct: 1129 WQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNLSPHQ 1188 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L+ NIAG I ++ + LE+TE E + + L R+AIDDFG Sbjct: 1189 FLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAIDDFG 1248 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR DI+KID FV DI + D I +I + V+AE VET++ Sbjct: 1249 TGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGVETRE 1308 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L G QGYL P P + Sbjct: 1309 QLEFLQARGCDLYQGYLTSPPIPAEE 1334 Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 32/138 (23%), Gaps = 10/138 (7%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFFII 250 ++ E R ++ A +LL + + GY + Sbjct: 655 ITERKQAETALRDSEDRFRSIFNNAIDGILLADSGTRKFIMGNSAIARMLGYSNEELLQL 714 Query: 251 FTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLL 306 T + + V L+ N + + + + L V L+ Sbjct: 715 GTEDIHPEQDKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKASPLRIGDKVYLM 774 Query: 307 YMVRIYHRSEWLNRRWHL 324 R + Sbjct: 775 GFFRDITERKQTEDALRQ 792 Score = 42.7 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 13/185 (7%), Positives = 45/185 (24%), Gaps = 15/185 (8%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR-RDIAPSLGKEKRAFTLS 218 ++ L L ++++ + + ++ R + Sbjct: 367 MALPNEMIFWLGLVAILIVFVVTSAVMLIWRQQQRLHRMELANRSSEQDKQLKLFYDLPF 426 Query: 219 WLAALSVLLLLLCTPYENDF--IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL-- 274 A++ + + GY + + NL + Sbjct: 427 IGMAITSPATKRWVYANDRLCDMLGYSRDDLLKTAWIDLTHPDDVAGNLKEFERMVAGET 486 Query: 275 --LNYNQNFLQGVETEYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWH-----L 324 N + F++ + ++ + ++ +V + + Sbjct: 487 DGFNIEKRFIRKDGSPITVNLDVKCTRRADGKPDLIVALVDDITQRKQTELALRAKEATY 546 Query: 325 QALTD 329 ++L D Sbjct: 547 RSLFD 551 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 108/566 (19%), Positives = 213/566 (37%), Gaps = 29/566 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + + + +++ R+ + T GY + Sbjct: 291 HFLAIAIERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTN------TGYAL 344 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 R + ++ + + E ++ + Sbjct: 345 HDIIGKKPNMHKSGKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSPVREA 404 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------- 351 L + + R A D LT LPN L++ ++ + Sbjct: 405 DGRITHYLAIEEDITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATL 464 Query: 352 -FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +D+ + ++ G + + + + L +++ ++ L +L G E +L+L G Sbjct: 465 AVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPG-AN 523 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + L + + L++ + + + L ++ Sbjct: 524 RESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQ 583 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 A S + + +T+ + +LN +R A+ Q L ++ QP + + G + +L Sbjct: 584 EGRN-AYRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLR 642 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 + G ++P +F+P+ + L + VL + +VNL + Sbjct: 643 WHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQ 702 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + ++++ K PQ + LE+TE A + + ++ + LH+ G R++IDDFG Sbjct: 703 FRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFG 762 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+ +A +KID FV+DI T+ D IV +I +AK L +AE VET + Sbjct: 763 TGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAE 822 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 QQA L + G QGY +P P AD Sbjct: 823 QQAFLREEGCHEAQGYHYSKPLPAAD 848 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 694 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 108/597 (18%), Positives = 214/597 (35%), Gaps = 24/597 (4%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 PL S + + L + S Sbjct: 142 LPLHTSLVRESPIRHVRLESIAFTQYGSGRLCRTALVDLSDRKREEDRLNLIAQVFERST 201 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 +L+ + +++ + ++ + R + + A Sbjct: 202 DAIMITDSLNRIVSVNRAFTTVTGYSADEVLGR------NPKLLASGRHDRDFYREMWSA 255 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQ 325 + + + + Y+ + + + S + + + R Sbjct: 256 IERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIYAEITDQRAAASRIQFL 315 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLTLLPN L+ + + L +D + ++ G ++ H ++ Sbjct: 316 AHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTINDSLGHLVGDHLLQ 375 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLD 434 + + L ++E++ + + G E +++L ++ + H+ + + I N L+ Sbjct: 376 EVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVLN 435 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + F + L+ +S A ++ +++ L N Sbjct: 436 VSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQ-FQFFTADMNAHALERLALEND 494 Query: 495 IRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 + A+++G+ L QP + G + +L G++TP +F+P+ + L Sbjct: 495 LHRAVERGEFRLMFQPQFEGSGSIIGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIG 554 Query: 553 LQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VLE + + SVN+ L QKN+ I RL +I P + LE+ Sbjct: 555 TWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELEL 614 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + ++ + +L + G R+AIDDFGTGY++ L+ +KID FV+D+ Sbjct: 615 TESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLS 674 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I +I LAK ++ V+AE VET QQ + L QG+ +P Sbjct: 675 DGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPE 731 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 94/581 (16%), Positives = 201/581 (34%), Gaps = 29/581 (4%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT--LSWLAALSVLLL----- 228 +L + L P + + +E + A ++++ Sbjct: 675 LLHIHALGIVSRDSRGVPSQMVGTLQDVTRRKMAEEGLVLAKMIFDNAGEAIVITDAQGD 734 Query: 229 LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + I GY + + + + + Sbjct: 735 ITDVNPAYQRIMGYTRDEIVGQNPSILKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKS 794 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + + + + + + + A DPLT LPN Sbjct: 795 GEIFPKWLTIDAIRDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRALFRD 854 Query: 343 APEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 EQ + +D ++++ G + + + ++ ++ + Sbjct: 855 RLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVA 914 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E ++L G E + + + + +G + E Sbjct: 915 RLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDY 974 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L ++ ++ +++ L +R A++ L L+ QP Sbjct: 975 ETLTKHADTAMYRAKEEGRG-TYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHYQPK 1033 Query: 512 RNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-P 567 + G + ++ + G+++P F+P+ + L V++ Sbjct: 1034 VDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLAR 1093 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + + ++NL + ++ R ++ ++P+ + +EITE A + ++ I Sbjct: 1094 SSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQI 1153 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G +++IDDFGTGY++ LK+L + +KID F++D+ ++ D IV SI +A Sbjct: 1154 GELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMA 1213 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A LSVVAE VE Q Q L + +QGY +P P Sbjct: 1214 SALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFE 1254 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 110/577 (19%), Positives = 208/577 (36%), Gaps = 29/577 (5%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPY 234 L L I++ +R E++ ++ A + + Sbjct: 492 ARLLPLLQTQIIAVIRNITKRKRAENELRQAEEKYRSIFENATEGIFQSSPSGSYISANP 551 Query: 235 ENDFIAGY--LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN---YNQNFLQGVETEY 289 I GY + + +G P + S L + + + Sbjct: 552 ALARIYGYDSPQELQHHLTDIGRQLYVNPDRRQQFVHSILEQGQVTDFESQVYRKDGSVI 611 Query: 290 SLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 ++ + +L V + H QA D LT LPN + Sbjct: 612 WISENARAVRDRQGNILYFEGTVEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQ 671 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + L +D + ++ G + ++ + + LLP ++E + + + G Sbjct: 672 ALADARRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGG 731 Query: 399 SELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E L+L +T + L + L + + + E LL Sbjct: 732 DEFTLLLPHVQTPADSVKIAERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLL 791 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 ++ M++ + + + L + + AL+Q +L +Y QP N Sbjct: 792 RNADAALYRAKEEGRNGLYC-YTPMLNSRGHELLALESELHKALEQQELDVYYQPQINAA 850 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 E + ++ G+++P F+ L + L VLE+ Sbjct: 851 TGEILRLEALVRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGFP 910 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL Q ++ ++ + ++ + LEITE A N + + +L Sbjct: 911 GLGTAVNLSVRQFQQPHLVQQVAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHELD 970 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G IA+DDFG+GY++ L++ IKID F++++ + D IV+++ L + + Sbjct: 971 QMGVGIALDDFGSGYSSLNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLN 1030 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LSVVAE VE+Q Q +L LG +QGY G P A Sbjct: 1031 LSVVAEGVESQSQLKVLRSLGCDIIQGYFFGPPIAAA 1067 Score = 55.0 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 7/137 (5%), Positives = 28/137 (20%), Gaps = 13/137 (9%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYL----VPVFFIIFTL 253 +R + E++ ++ A + Y + + + Sbjct: 265 KRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSPEELLAHLTDI 324 Query: 254 GVGKLRYPFLNLTWAV---STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLY 307 G P + + ++ + + + + + Sbjct: 325 GRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDGTGKLLYYEG 384 Query: 308 MVRIYHRSEWLNRRWHL 324 V + + Sbjct: 385 TVENITDRKRTELQLLQ 401 Score = 45.8 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 14/138 (10%), Positives = 36/138 (26%), Gaps = 15/138 (10%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLV-----PVFF 248 +R A + E R +L ++ + + +L +P + + F Sbjct: 138 LKRAEAALIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGKSAFG 197 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLL 306 ++ +++ F L F + L L++ ++ Sbjct: 198 LVHPQDRKQVQQTFQQAITHTE--FTLTVEYRFRHQDGSWRFLESTGRNLLADPAVAGIV 255 Query: 307 YMVRIYHRSEWLNRRWHL 324 R + Sbjct: 256 VNTRDITDHKRTESALRQ 273 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 99/625 (15%), Positives = 209/625 (33%), Gaps = 39/625 (6%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + I ++ L ++F +L+ + + + Sbjct: 7 FWDVLPISLLMLGSVATIHLASLYYFEGESLSW---PILTTLSIAVIFAFLSLIQIRLNR 63 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-------------PYENDFIAGY 242 + + K K+ + + S+++ Y + G Sbjct: 64 QLAAKVKALHERDFKLKKLSSAVTNSGCSIIITDRLGRIEFVNNKFVNVTGYGQEEARGR 123 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---I 299 + + P + + + ++ A ++ + Sbjct: 124 FLDILNPKD----MDAEKPQEQIWESDILYDGWEGEVLSRRRDGYDFWWAVTVSTVCDSD 179 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKS 351 + + + NR+ AL D LT L N R EQ + Sbjct: 180 NTVTNYVISGVDVSELKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIA 239 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G ++++ + L ++ + + +L G E ++L+ Sbjct: 240 LLFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDT 299 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + I + + + L+ ++ H Sbjct: 300 FSVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKEH 359 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 E ++ KQ+L+ +R AL + L QP N + + ++ Sbjct: 360 GRDR-YHFYTEELNAHALKQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRW 418 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTL 584 G++ PD F+ + + L VL++ + + +VNL Sbjct: 419 HHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQF 478 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + I + P+ + LE+TE + ++ +++L + G +AIDDFG+ Sbjct: 479 DDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGS 538 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK+L + +K+D FV+DI ++ D I +I +A L VVAE VET +Q Sbjct: 539 GYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQ 598 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L + QGY +P D Sbjct: 599 KEYLLANQCDFAQGYFFSKPLSFED 623 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 110/615 (17%), Positives = 212/615 (34%), Gaps = 29/615 (4%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ--IL 199 + + L IS + ++ + + ++ + Sbjct: 508 IDMAARIVNLAISKNQPFKLQHRDITPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNITG 567 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVG 256 + T + ++ I GY Sbjct: 568 RKLKEEQLRVAAAAFETHEAIMITDAHGTIIKVNQAFQRITGYSQEEVLGENPRILSAGR 627 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYH 313 + + + ++TL + Y + + + + + Sbjct: 628 NEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYVAIFSDIT 687 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + A D LT LPN R L + L +D + ++ Sbjct: 688 QRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDRFKTLND 747 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNI 420 G + + + ++E + + +L G E ++++ +T + + Sbjct: 748 TMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRAEETSKHIAAIAEK 807 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + S + G +E+ LL Q+ A+ Sbjct: 808 IRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRN-AVRFF 866 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTP 535 + ++ +V L N +R AL L LY Q + G + ++ + G+++P Sbjct: 867 DPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAIGAEALVRWIHPIRGMVSP 926 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRI 593 F+P+ + +L VL++ LA +VN+ Q I Sbjct: 927 AHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQVGFVEHI 986 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 L + Y I PQ + LE+TE ++ + + L G R+++DDFGTGY++ LK Sbjct: 987 AELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSSLSYLK 1046 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L D +KID FV++I T+ DA++V++I +A+ L+V+AE VET+ Q A L + G Sbjct: 1047 NLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFLKQNGC 1106 Query: 714 QYLQGYLIGRPQPLA 728 QGY G+P P+ Sbjct: 1107 MCYQGYYFGKPAPIE 1121 Score = 48.8 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 7/139 (5%), Positives = 25/139 (17%), Gaps = 9/139 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYENDFIAGYLVPV 246 I + S ++ + L C + + + + Sbjct: 319 DITERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHCHGFSKEELLSMTIHD 378 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL- 305 F +L + + + + + + + Sbjct: 379 LDPDFP------PDVWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANFVKFGDKEYN 432 Query: 306 LYMVRIYHRSEWLNRRWHL 324 + R + Sbjct: 433 IAYHRDITERKKSEAALRY 451 Score = 42.3 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 17/150 (11%), Positives = 36/150 (24%), Gaps = 19/150 (12%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPV 246 +R A E++A L + VLL +LLC D + + Sbjct: 182 IARDITERKRAEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSEAQL 241 Query: 247 F---------FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET-EYSLAFILA 296 +I G + + + + + L A Sbjct: 242 LGKSSFDPDWNVIHEDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRPSKRDRVWLLVSAA 301 Query: 297 VLIS---FSVCLLYMVRIYHRSEWLNRRWH 323 ++ ++ + + R Sbjct: 302 PQLNPNNEVEQVVCTFVDITERKKMEERLE 331 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 107/566 (18%), Positives = 201/566 (35%), Gaps = 29/566 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 R I + R + + + +L I GY Sbjct: 59 ATARDISGRRQTERQLRLAAQVFESSNEA---ILISDPDNRIL---TVNRAFGHITGYGE 112 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 F + + + + + ++VL Sbjct: 113 AEVRGSKASMLFSDRHEPAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDG 172 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 + + + R A D LT LPN + Q Sbjct: 173 QGEISHFVALFTDISERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQL 232 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D+ + ++ G ++ + R L ++ + + + G E +L+L Sbjct: 233 AVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQ 292 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 G + + + L +G + +Q LL + A Sbjct: 293 PGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKA 352 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 H ++ Q +++L+ N +R A++Q L L QP + G + +L Sbjct: 353 HGRN-TFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEALLR 411 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 D G++ P +F+P+ L VL+ + + R +VN+ Sbjct: 412 WRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQ 471 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L++ + + +R+ + + LE+TE ++A+ + + + G R+AIDDFG Sbjct: 472 LMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFG 531 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR D++KID F+ D+ + +A IV +I LA A + +AE VE + Sbjct: 532 TGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENEN 591 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 QQ L LG + +QGYL+G P + Sbjct: 592 QQRFLQTLGCEAMQGYLLGSPL-AEE 616 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 109/559 (19%), Positives = 209/559 (37%), Gaps = 25/559 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I A + R ++ + L+ I GY Sbjct: 464 DITERKRADLALRLQSRALDASVNAIL-ITEPSKEGNLIEY--VNPAFKRITGYDPQEVI 520 Query: 249 IIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFS 302 + + + A++ ++ + + +A + + Sbjct: 521 GQDCRLLQRDDRDQEGIAAIRQALAANREVSAVLRNYRKDGALFWNQLYIAPVPDADGQT 580 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + ++ + QA D LT LPN L G + Sbjct: 581 THHIAVINDVTALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVVF 640 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G + + + L + ++ + + G E ++V++ E L Sbjct: 641 IDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGDEFVIVMTDTVDEQSL 700 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + S + + T L +G F + + + L+ + ++ Sbjct: 701 IAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRN 760 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + ++ ++ L +R AL + LL+ QP + + G + ++ Sbjct: 761 -TFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGMEALVRWHDP 819 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + G++ P +F+P+ + L VL + + P R SVNL Q+ Sbjct: 820 EVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQR 879 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 +IA ++++ + + PQ + LE+TE NAE ++ + +LH G +AIDDFGTGY+ Sbjct: 880 DIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYS 939 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR D +KID FV DI ++ D I +I LA + +L V+AE VET Q Sbjct: 940 SLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDF 999 Query: 708 LHKLGVQYLQGYLIGRPQP 726 L + +QGY +P P Sbjct: 1000 LKERACDEMQGYFFAKPLP 1018 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 119/664 (17%), Positives = 230/664 (34%), Gaps = 32/664 (4%) Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 L + +R GL S L L L ++ FPL I T Sbjct: 30 AALPDARVSICATLAEYRAGLASDPPDIVLIDLNLPDGSALEALT-CPAEEGAFPLLIMT 88 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW--RRDIAPSLGKEKR 213 G+ + + +L V + + +L R+ E R Sbjct: 89 AHGNEEMAVAAMKAGALDYIVKSAQAFACMPQTVERALREWNLLRKHRQAELSLCESESR 148 Query: 214 AFTLSWLAA------LSVLLLLLCTPYENDFIAGYLVPV-----FFIIFTLGVGKLRYPF 262 + V + ++ GY + + Sbjct: 149 FRRILQEIPSIAFKGYGVDGTVRYWNLASELFYGYSAGEAIGRNLLDLVIPEGMRAEEKR 208 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNR 320 L A + Q L+ + ++ AV+ + L + + Sbjct: 209 RMLRMAETGRADPPSEQCLLRRDGSRITVLSCHAVVRRPGEAPELYGLDIDISERKINEE 268 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMR 372 + A D LT L N EQ + L +D + ++ G Sbjct: 269 QLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGHSFG 328 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWN 429 + ++ + L ++++ + + +L G E +L+L+ + + + + + Sbjct: 329 DRLLSAVAQRLDRVVRDTDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIE 388 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 + M + + L+ ++ ++ + + + Sbjct: 389 GREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQEGGG-VFSFYAPEMNQRAMETM 447 Query: 490 LLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 + + +R AL++G+ LY QP + G + ++ L G++ P F+PL + Sbjct: 448 EIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETG 507 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L VL+ + + + +VNL ++ G + + + P Sbjct: 508 LIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPH 567 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE ++ + +E+L G R+++DDFGTGY+++ L + +KID Sbjct: 568 LLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRS 627 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F+K IVT+ A I SI +A L +AE VET+ Q A L K G +QGYL+ RP Sbjct: 628 FIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPL 687 Query: 726 PLAD 729 P ++ Sbjct: 688 PASE 691 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 98/560 (17%), Positives = 204/560 (36%), Gaps = 29/560 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVPVFFIIFTL 253 + + E+R + + + Y + Sbjct: 147 ITQRKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQS 206 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFL-------QGVETEYSLAFILAVLISFSV--- 303 + ++ + L L+ + + + ++ + + + Sbjct: 207 LNNIAQQLYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGKLL 266 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 V + N QA D LT LPN ++ + + + Sbjct: 267 YFEGTVEDITERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQAISYADRTASKLAVVFV 326 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + ++ R L +++++ + + G E +L+LS L Sbjct: 327 DLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVLLLSNIHGMDALS 386 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + + + +T + LL ++ Sbjct: 387 QTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAMYKAKQEGKN- 445 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYD 529 ++ +++ + +R AL + L+ QP N G + ++ Sbjct: 446 NFQFYTRELNSILVERLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEALIRWHNPR 505 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTLLQKN 588 G+++P++F+P+ + +L + VLE +A SVN+ P Q N Sbjct: 506 QGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVSPRQFQQSN 565 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + G I R+ + + P + LEITE + + + L G ++AIDDFGTGY++ Sbjct: 566 LVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAIDDFGTGYSS 625 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK D +KID FV + ++T + I+++I L +++VAE VET++Q+ L Sbjct: 626 LGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVETERQRDFL 685 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 +G +QG+L +P P Sbjct: 686 LSIGCDEMQGFLFSQPLPFD 705 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 103/501 (20%), Positives = 193/501 (38%), Gaps = 19/501 (3%) Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 I G L L A+++ + + + + L+ + F Sbjct: 345 LIDIIQPGGESLSMADKTLWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFIS 404 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 L ++ + R H A D LT LPN ++ + + Sbjct: 405 HYLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFI 464 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 ID + ++ G ++ I L ++E + + + G E +L+L+ Sbjct: 465 DIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRMEDAN 524 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + ++ L + + G+ T + LL S Sbjct: 525 DVTQRILKKLKEPVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKESGRD- 583 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 V + +Q+L +R AL+ +L+LY QP N G + +L Sbjct: 584 NYHFYSSTVQEKAYEQLLEEMYLRRALENRELVLYYQPQVNIATGRLVGMEALLRWKHPK 643 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN 588 G+++P +F+PL D VL + K +VN+ T ++N Sbjct: 644 KGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTFGREN 703 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + +SP A+ LEITE A N ++++Y + +L G +I IDDFGTG+++ Sbjct: 704 LIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGTGFSS 763 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L + +KI F+ ++ + ++ IV+++ +AK+ L+V+AE VET +Q L Sbjct: 764 LSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQFEFL 823 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 L QGYL + + Sbjct: 824 QGLQCDEFQGYLCSKAVTSEE 844 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 109/572 (19%), Positives = 203/572 (35%), Gaps = 29/572 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-LLLCTPYENDFIAGYLV 244 L R S + R ++ ++ L ++ I GY Sbjct: 208 LIREFASFTALAVQKVRATEALRLSATVFASIREGVVITDLEPRIVAVNRAYMRITGYSE 267 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--- 298 + + + + + + Y + + Sbjct: 268 EQVLGKNPKIIKSGLHDKTFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWLTINAVCID 327 Query: 299 -----ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPE 345 S S + + + + + A DPLT LPN +E+A Sbjct: 328 SSCCDESNSCNYVGVFTDISQIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQR 387 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + +D + ++ G + + + + ++E + L +L G E LLVL Sbjct: 388 HGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVL 447 Query: 406 SGPETEGRLQHMVN---ILNSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 G + L + + + + F + L+ Sbjct: 448 EDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMA 507 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEG 518 Q+ E +S +++++ N +R AL +L+L+ QP+ + G Sbjct: 508 MYQAKKEGRN-TYRYHTEALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVG 566 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + ++ ++ P KF+P+ + L VL + K +V Sbjct: 567 VEALVRWQPPGKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAV 626 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL +N+ G + R+ + + + LE+TE + E S+ + +L G + Sbjct: 627 NLSVRQFQSENLVGMVQRILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHL 686 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTGY++ LKR D +KID FV+D+ + D I +I +A+ L V+AE Sbjct: 687 AIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAE 746 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +E+++Q A L + Y QGYL RP P + Sbjct: 747 GIESEEQLAFLRQQDCDYYQGYLFHRPVPAIE 778 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 121/754 (16%), Positives = 253/754 (33%), Gaps = 53/754 (7%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLC-----VMLSILFIFG---------WRGVV 65 + L+ +S A++ F+ L ++ +++++ G W Sbjct: 81 IAAALLAMSGLDGLHAMMPDGESFVWLHSLATAFGGLLFAMIWLPGHWFKPVMRHWPLNA 140 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW--- 122 ++ Q V+ + L + LT R+ Sbjct: 141 FLMAAAMGIYSILQPGQIPQMLASGQFTQAAVIMNIGGGLFLLLAAVKLFLTYRHSAKSE 200 Query: 123 --QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 F ++ I + + + G ++ VV + + Sbjct: 201 DLLFFFQCLILASAAITFMQSSIWDMPWWGWHMQRLAGYTLTLWLVVKTAKTIEGKTLLS 260 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA--FTLSWLAALSVLLLLLCTPYENDF 238 L + I A+ R E + + ++ + D Sbjct: 261 --NRLLKQQIEDRKQAENQLRIAATAFETHEAIMITDAHANIIRVNQAFQNITGYSPEDV 318 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 I P G + L + S + Y + + Sbjct: 319 IGK--NPRVLSSGRQGSEFYAAMWKRLLGSGS----WTGEIWDKRKNGEVYPKWLTITAV 372 Query: 299 ISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + + + A D LT LPN R L Sbjct: 373 KDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARSN 432 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + + R + +++ + + ++ G E ++++ Sbjct: 433 HYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLIEE 492 Query: 408 PETEGR-----LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 T+ + + + + + + GN+E++ LL Sbjct: 493 IGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRHAD 552 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGE 517 Q+ + + + + L +R A+ L LY Q + Sbjct: 553 LAMYQAKESGRN-GVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQLTSDHRPL 611 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRF 575 G + ++ + G+++P +F+P+ + +L VLE+ K L + Sbjct: 612 GAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLIL 671 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 ++N+ + + + L + ++P + LE+TE S+ + + L G Sbjct: 672 AINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGV 731 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++A+DDFGTGY++ LK+L D IKID FV D+ T+ DA++V++I +LA ++V+ Sbjct: 732 KLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNVI 791 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VET+ Q L + G QG+L G+P P+ + Sbjct: 792 AEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDE 825 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 95/565 (16%), Positives = 196/565 (34%), Gaps = 24/565 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 +V Q + E+ ++ A + + + I GY Sbjct: 761 AFLASLVDVTDIQQAQEQLKILYQATEQSPVSVVITDAEG---TIEYVNPKFEKITGYQR 817 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 + + +++ + + + + A ++ + Sbjct: 818 AEVIGQNPRILKSGETTTEEYKQIWKTITSGQEWHGEFHNKKKNGELFWEAASISPIKNA 877 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + QA D LT LPN Q+ Sbjct: 878 EGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFLAIDRLKQAILQADRQKKRV 937 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D+ + ++ G ++ + + L +++++ + +L G E L++L Sbjct: 938 AVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGDEFLIILPNLRE 997 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + S + + + + + + L+ Sbjct: 998 THHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLMRNADAAMYLGKR 1057 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILA 524 ++ + ++ + +R AL + + L QPI + G + +L Sbjct: 1058 GGRND-FKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAEALLR 1116 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G ++PD+F+ + + L + V+ + + +VNL P Sbjct: 1117 WNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGSPIWVAVNLSPRQF 1176 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + I I+ + LEITE+ + S IEQLH+ FR++IDDFGT Sbjct: 1177 RESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSIDDFGT 1236 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+ L + + +KID F+ DI N +V++I + L V+AE VET +Q Sbjct: 1237 GYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLKLQVIAEGVETTEQ 1296 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 +L G Y QGY RP + Sbjct: 1297 ANILEAEGCDYAQGYFFSRPLLSEE 1321 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 11/149 (7%), Positives = 30/149 (20%), Gaps = 16/149 (10%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + + L+ A + + + L+ + +G+G Sbjct: 418 SQQQGTEESLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGW 477 Query: 258 L--------RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 F ++ T + + + L Sbjct: 478 ANYVHNDDRARVFNEWIKSIQTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYL 537 Query: 307 YMVRIYHRSEWLNRR-----WHLQALTDP 330 + + +QA+ D Sbjct: 538 GTLTDITERKNAEEATNKINAQMQAIFDA 566 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 109/552 (19%), Positives = 197/552 (35%), Gaps = 26/552 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYL--VPVFFIIFTLGV 255 S + + A ++LL + + G L Sbjct: 279 AQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFAS 338 Query: 256 GKLR-YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRI 311 G + V L + YS + + + + + Sbjct: 339 GLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITD 398 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + + QA D LT LPN + EQ L +D + + Sbjct: 399 ITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQI 458 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + YG ++ R L ++ ++ + +L G E +++LS E + ++ + Sbjct: 459 NDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILY 518 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 S T + F + ET LL + Sbjct: 519 SLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAK-QGGERRYAIFTPD 577 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKF 538 ++ ++ + + + +R AL + + L+ QP + G + ++ + G++ P F Sbjct: 578 MARRSLALLTMESDLRHALARDEFELHFQPKVRADLTLIGAEALIRWRHPEKGLINPGDF 637 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLF 597 +PL + L L + + + SVN+ P + + + ++ Sbjct: 638 IPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQIL 697 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + P+A+ LEITE + E ++ + L G ++IDDFGTGY++ LK Sbjct: 698 VETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPI 757 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV+D++ + DA IV +I LA+ SVVAE VE +Q L Q Q Sbjct: 758 DTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQ 817 Query: 718 GYLIGRPQPLAD 729 G+L RP P A+ Sbjct: 818 GFLYSRPLPPAE 829 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 24/262 (9%), Positives = 48/262 (18%), Gaps = 14/262 (5%) Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV-WQRLFWLGLVTPIGI 136 ++ +A + S + A+LR + L + +T Sbjct: 29 APSIAEGLSAALFQSVVEALPVGTALLRDGVIVHANATLAGQIGETIDTLIGSPLTSYLT 88 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 V + + + S L ++ L ++V Sbjct: 89 PADALAVQKVVEGAIALHGGVPVRRIAHIRHISGSERVYSLRFSPLDNGPHPLLVVITRD 148 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIF 251 E + + A + L I GY P I Sbjct: 149 MTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIAH 208 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQN-----FLQGVETEYSLAFILAVLIS---FSV 303 + Y L + + + + Sbjct: 209 FTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVWRCDGHTIWITENARCVRGPDNEVL 268 Query: 304 CLLYMVRIYHRSEWLNRRWHLQ 325 V L Sbjct: 269 YYEGTVEDITAQRQSQETMRLL 290 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 109/529 (20%), Positives = 198/529 (37%), Gaps = 20/529 (3%) Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 L A L D + + + + + Sbjct: 519 LMADLQGRLTYANQAALDLWGYAGEEEVLGKNIVEFQEDPQRTRIIMEILKARGVWRGEG 578 Query: 280 NFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 Q + + V+ + +L + A D LT LPN Sbjct: 579 RGKQKNGNGFDVELQAQVVKDQNGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPN 638 Query: 337 FRALEQAPE----QEAG----KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L+ E Q + L +DN + ++ G IRS+ L + Sbjct: 639 RTLLKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECR 698 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNI----LNSRQIHWNNTGLDMGYGAAWGRF 444 + L + G E +L+L+ + L R + ++ + Sbjct: 699 TCDTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALY 758 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + + LL + ++ + ++ Q ++ + +R+AL +G++ Sbjct: 759 PQDGQDPETLLKRADTAMYEAKKNGRN-GYHFFSLQLAEQAERRHRMEINLRSALKEGEM 817 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP + G + +L + G ++P +F+PL + L VL+ + Sbjct: 818 QLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACR 877 Query: 562 WLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 A + +VNL Q ++A I ++ + +SP + LEITE N Sbjct: 878 QGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENM 937 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E+++ + +L K G + +IDDFGTGY++ LK+L D IKI FV+DI T+ D I+ Sbjct: 938 EAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAII 997 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ +AK+ + ++AE VE QQ A L G +QGY +P P + Sbjct: 998 KATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 121/645 (18%), Positives = 225/645 (34%), Gaps = 42/645 (6%) Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL-LSLFTAVL 177 R L + + ++ + + L + Sbjct: 270 LAAANRNLVQALAILLAVWLLVFGGAWVLARGVMDRGLAEEMRIRELNEQLEQRVLERTA 329 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 L R I A+ R +E + ++L + Sbjct: 330 RLESANQELNREIAERSRAEAELRIAAIAFDSQEGMM------VTDAHGVILRVNRAFVE 383 Query: 238 FIAGYLVPVFFI-IFTLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFIL 295 V L G+ + W V + Y + + Sbjct: 384 ETGYSAEDVVGRKRTMLTSGREDAALDDAMWETVQRCGAWQGEVWDRRKNGEVYPVWLTI 443 Query: 296 AVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + + + + + + + H A DPLT LPN R L Sbjct: 444 SAVKGQGGLVTHYVATHIDITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGST 503 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +DN + ++ G + + + + L +++ + + +L G E +++ Sbjct: 504 RSRNQGAIMFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVM 563 Query: 405 LSGPETE----GRLQHMVNILNSR---QIHW---------NNTGLDMGYGAAWGRFDGNQ 448 + + +++ + + + N F + Sbjct: 564 VQDLAADSMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHS 623 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + LL Q Q+ A+ + + T +V L +R A++ G LY Sbjct: 624 TNVDELLKQADLAMYQAKDSGRN-AIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYY 682 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L G++ P +F+PL + L VLE+ LAT Sbjct: 683 QPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLAT 742 Query: 566 H--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + +VN+ + Q + +++ + +PQ + LE+TE SN E Sbjct: 743 WASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDI 802 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L G ++DDFGTGY++ LKRL D +KID FV +++T+ DA I + I Sbjct: 803 IAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMI 862 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA++ L+V+AE VET++Q+ L + G QGYL +P PLA Sbjct: 863 VALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLA 907 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 98/538 (18%), Positives = 211/538 (39%), Gaps = 26/538 (4%) Query: 217 LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + + S+++ +L + + GY + + + Sbjct: 21 IFEYSNESIIITDAQNRILFVNPAFEIVTGYSAEEVIGKNPRILQSGMHDKQFYKKMWND 80 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + Y ++V+ + M + + Sbjct: 81 IKQHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVEQLTRL 140 Query: 326 ALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 AL D LT +PN LE+ E + L +D + ++ G + ++ Sbjct: 141 ALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVGDMLLK 200 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 + L ++++ + + + G E +++L + +M + R +N+ + Sbjct: 201 ETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKRPFCFNHQEIY 260 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + + + L+ Q+ + + G + L Sbjct: 261 ISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRNQ-YALYHAGMHGNGKQLFQLETA 319 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL++G+ LY QP + K+ + ++ + G ++P F+PL + L Sbjct: 320 LRKALERGEFELYYQPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGLITPI 379 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 ++ + L + S+N+ P+ Q + ++ + + +++P+ + LE+ Sbjct: 380 SDWIMMQACEHLKQLQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVNPRLIELEL 439 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE +AE S+ + +L G IAIDDFGTG+++ L R DI+KID F K + Sbjct: 440 TESAVMPHAEQSVERLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKIDRSFTKQLS 499 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D+ IV++I +A + + VVAE VET++Q +L K ++QGY + +P +++ Sbjct: 500 RYQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSKPLSISE 557 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 110/550 (20%), Positives = 211/550 (38%), Gaps = 26/550 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLL----CTPYENDFIAGYLVPVFF----IIFTLG 254 +E + A + + +L + GY + + Sbjct: 24 SATAMTEQETMFRSTMEAAQVGIFVLQNQRFKYVNPFLVGMFGYSAEELLEQMGPLDLIL 83 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV-LISFSVCLLYMVRIYH 313 + + + + + NY L+ + + + + +I + V Sbjct: 84 PEQHAFVIEQMQLRAAGVLGHNYELTGLRKDGSTLPIMVLGSPSVIGGLPASVGTVLDIS 143 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + +R A D LT LPN R L + EQ ++ + L +D+ + ++ Sbjct: 144 AQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVND 203 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---N 422 G + + + R L +++ + L +L G E + + G T ++ + L Sbjct: 204 SLGHSVGDELLCEVARRLDSVVRRIDTLARLGGDEFIFAMPGFHTAAAVE-VARRLVEVF 262 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 SR L + + + L+ LL ++ A ++ Sbjct: 263 SRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRN-AFQFYSSEMN 321 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 T ++L+ + +R AL Q + +L+ QP+ N E G + ++ L + G++ PD+F+ Sbjct: 322 TTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFI 381 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + L VL + +VN+ P+ Q + Sbjct: 382 HVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALA 441 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + LE+TE +A+ +M + LH+ G +++DDFGTGY++ LKR Sbjct: 442 TSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVG 501 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV D+ T+ D I +I + ++ ++V+AE VE +Q ALL K+G QG Sbjct: 502 KLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQG 561 Query: 719 YLIGRPQPLA 728 Y RP Sbjct: 562 YYFSRPMSAD 571 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 111/580 (19%), Positives = 213/580 (36%), Gaps = 30/580 (5%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 ++ + Y L + A SL + + Sbjct: 119 VLGYRVSYMLRASGALEQLRESRAGLAHAQSLAHIGSWEWDLVTGEIRCSEEVYSICSIE 178 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 G P+ + L G ++ + L +Y G T ++ + Sbjct: 179 RSFKG-GNPILDPVHPLDRGFVQGSIDEAIGKRAPLS-FDYRITLGGGERTLHAELVTVL 236 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------A 348 +VCL ++ + + L A D LT LPN R Q EQ Sbjct: 237 DEQGEAVCLTGTIQDITERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDR 296 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ------------L 396 + L +D + ++ G + ++ + LL ++ + L + L Sbjct: 297 MLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRL 356 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E ++LS E + + + + + + + T Sbjct: 357 GGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASD 416 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L+ Q+ +E ++ + ++++L + + AL + + ++Y QP + Sbjct: 417 LIRNADGAMYQAKEQGRN-GYQIYDESMNAKALERIILESQLHKALKEEEFIVYYQPQVS 475 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 G + ++ + G++ P +FLPL + L + D V+ + Sbjct: 476 NQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAG 535 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 ++N+ ++ + + + K + P + LE+TE ++ E ++ ++ Sbjct: 536 FPPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQA 595 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G R+AIDDFGTG+++ LKR D++KID F+ DI T+ DA I + ++A Sbjct: 596 LKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMAHT 655 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET+ Q L K G QGYL +P P + Sbjct: 656 MKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTE 695 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 98/562 (17%), Positives = 195/562 (34%), Gaps = 23/562 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-LLCTPYENDFIAGYLVPVF 247 + + + K + ++ + + I GY Sbjct: 140 SLQNRVQFLYKMMVAERQLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRGSV 199 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SF 301 I R + + + T + Y ++ + Sbjct: 200 LGQNISILQSGRHDRRFYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTGDGQ 259 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 + + + R + + D LT LPN Q + + Sbjct: 260 TESYVGVFTDLTRIKESEENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIVAVL 319 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + + + L + L +L G E +VL Sbjct: 320 IVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKATLARLGGDEFGIVLPNMTQNRD 379 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + ++ I + +G + + E L+ + Sbjct: 380 AALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQSGR 439 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 ++ + ++LL + +R A+D+ + LL+ QP + G + ++ Sbjct: 440 N-NFQFYRSELNTASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQH 498 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQ 586 + G+++P +F+PL + L L+ + R SVNL + Sbjct: 499 PEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQFRL 558 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + ++R + P + LE+TE A + E ++ + L +FG +AIDDFGTG+ Sbjct: 559 PDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGF 618 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+ D +KID FV++ + DA I+R+ +LA + +L V+AE VE +Q Sbjct: 619 SSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLE 678 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L + +QGY GRP Sbjct: 679 FLAQESCDEIQGYFYGRPLSGD 700 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 105/606 (17%), Positives = 213/606 (35%), Gaps = 67/606 (11%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGY 242 + L + + + ++ + + + Sbjct: 479 ITSRKVAEDSLRESVMLQRAILNSAKLMILSTDSEGRVISCNPATEQMLAYPSAELLGRT 538 Query: 243 LVPVFFIIFTLGVGKLR----------YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 V FF+ + + L V + F + ++ + Sbjct: 539 PVECFFLREEIQERRRALSSETGFDPASDIDVLLARVRLGSVDQGQWTFQRKDGEKFIVE 598 Query: 293 FILAVLISFS---VCLLYMVRIYHRSEWLNR----------------------------- 320 ++ L L++ + Sbjct: 599 LSISALHPEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSELESEVLERRR 658 Query: 321 ---RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGL 369 + A D LT L N L+Q + + + + +D + ++ G Sbjct: 659 IESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTINDSLGH 718 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QI 426 + ++++ L ++ N+ + +L G E +++L E + + + I Sbjct: 719 HIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPI 778 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + L + + + T+ L+ Q+ A+ ++ Sbjct: 779 RIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRN-TYCYFTAEMNAAAD 837 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIA 543 + + +R A+D+ + ++ QP+ + Y+ ++ G++ P +F+ + Sbjct: 838 NYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAE 897 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L VL L + + P ++NL P+ N+ I R+ + Y + Sbjct: 898 ESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICRILRDYDL 957 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 +P + LEITE + E ++ ++ L GFR++IDDFGTGY++ LKR D +KI Sbjct: 958 TPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKI 1017 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F+ D+ N D IV +I LA + LSV+AE VET++Q LL L + QGY + Sbjct: 1018 DRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMA 1077 Query: 723 RPQPLA 728 +P P Sbjct: 1078 KPMPAE 1083 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 690 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 98/567 (17%), Positives = 199/567 (35%), Gaps = 30/567 (5%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTL---SWLAALSVLLL-----LLCTPYENDFIAGYL 243 + ++A + E + + +++L +L I G+ Sbjct: 164 ELTQSNERLSNEVAVRMRAESGLRLIHKVFENTSEAIILTDPQGMILDINPAFTEITGFS 223 Query: 244 VPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI- 299 + N+ ++ + Y + + Sbjct: 224 REEALGHNPRSFKSDRHDATFYTNMWRKIAEEGFWQGEIWDRRKNGEIYPKRLTINAVRN 283 Query: 300 --SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + S+ + A D LT LPN Sbjct: 284 QAGEVENYIGIFSDISESKATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQ 343 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D + ++ G ++ + + L ++ + + ++ G E ++L+ Sbjct: 344 VAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILADIS 403 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + I + +G + N ++ L ++ Sbjct: 404 DNESVARVARKVLEELQKSISIKGHDIFVGASIGIALYPDNGNDVETLTKNADMAMYRAK 463 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEIL 523 E ++ T++++ L + + A++ L +Y QP N + G + ++ Sbjct: 464 ESGRG-NYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYYQPKLNMQSGIMVGMEALV 522 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPL 582 + DG ++ P +F+P+ + L V+ + A R +VNL Sbjct: 523 RWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRETGMNLRVAVNLSAR 582 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + I + + + +EITE + E+++ +EQ+ + G IA+DDF Sbjct: 583 EFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAIATLEQISRLGIHIAMDDF 642 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+ +K+D FVKDI + D IV +I LAK +L VVAE VETQ Sbjct: 643 GTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKVLNLKVVAEGVETQ 702 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q + L + QGY +P D Sbjct: 703 EQLSFLRQNLCDECQGYSFSKPLSAVD 729 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 690 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 97/564 (17%), Positives = 215/564 (38%), Gaps = 27/564 (4%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVP 245 + ++ T A +SV++ + ++GY Sbjct: 227 RDRVAIFSRDVTQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSED 286 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + ++ +++ + + ++ + Sbjct: 287 EVLGRNPRLLKSGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDD 346 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + + ++ QA D LT LPN LE + Sbjct: 347 GVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIG 406 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + ++ + L ++ ++ + +L G E ++VL+ ++ Sbjct: 407 LMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQST 466 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 L + + + + + +G + + + L+ ++ Sbjct: 467 TELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQK 526 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + ++ + ++ L +R AL +G+ L+ QP + G + ++ Sbjct: 527 GRN-TFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRW 585 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTL 584 + G ++P F+P+ + NL + VLE + +A G + +VN+ Sbjct: 586 NSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQF 645 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 L + I L +Y + P + +E+TE + + ++ + +L + G ++++DDFGT Sbjct: 646 LNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGT 705 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL IK+D FV+D+ + +A IV +I LA A +S+VAE VET+ + Sbjct: 706 GYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGE 765 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 + L G +QG+ +P P Sbjct: 766 EQHLKDAGCIKVQGFRYAKPMPAD 789 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 690 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 123/642 (19%), Positives = 233/642 (36%), Gaps = 30/642 (4%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL--SLF 173 + R F + L+ +G + + + ++ G D L + Sbjct: 61 PEPQEQKNRNFRVTLIILLGKYLWIAGILASVVMSEAVTAAMGLLFKGEVTYDYLATGMV 120 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 A+ + ++ + +M Q ++ E+R TL +A+ ++L+ T Sbjct: 121 AALFVSAIMVTAIMKMEELERRRQEEVAKN-RALRASERRYRTLIEVASDAILVTDSETG 179 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPF----------LNLTWAVSTLCLLNYNQNFLQ 283 D + + L +L + + ++ Sbjct: 180 TLVDCNRQAETLLGMSRNEIIGRHLCNLQQTGNDADGAETDLLGHMLRGKTGTIELSLVR 239 Query: 284 GVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 T + + + R + R A DPLT LPN L Sbjct: 240 ADGTTVPVEVSSSTFEMDGRRYVHGAFRDITQRREAEDRIKHLAHHDPLTNLPNRVFLHG 299 Query: 343 APEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 EQ + + +DN + ++ G + + + L + ++ + Sbjct: 300 RLEQAIELARREQNQVAVMFIDLDNFKRINDTLGHRIGDALLEQVAARLTENVPGSQVVG 359 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E ++V++G M + R + L G + + + Sbjct: 360 RLGGDEFIVVITGNRVSTTSAAMAERILESLCRPYTVEDYQLHSGASIGIAIYPADGNSA 419 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ + + + + ++ +++ + N +R AL G L+ QP Sbjct: 420 ETLMKHADAAMYHAKSRGRN-TFEFFSQAINRGVRERLDIENGLRDALKHGGFKLHYQPQ 478 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + +L G++ PD+F+P+ + L L V++ L Sbjct: 479 IDLTTGSICSVEALLRWRHPLLGVIAPDRFIPIAEETKLILPLGLWVIDRACHQLRAWRN 538 Query: 569 DKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 D G R +VN+ L ++ + + +R+ +S + LEITE N + Sbjct: 539 DGIAGVRMAVNVSVKQLQDESFFEALGSIVERHGLSGSDIELEITESAIMENLSRVQALL 598 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + L +G ++IDDFGTGY++ RLK L +KID FV DI T+ +A I I L Sbjct: 599 KSLQDYGITLSIDDFGTGYSSLGRLKLLPIQSLKIDRSFVHDIETDHGNAKICDGIIALG 658 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L ++AE VET Q+ LL G +QG+LI +P P D Sbjct: 659 HSLGLKIIAEGVETDAQKNLLQNSGCDAIQGFLIAKPLPADD 700 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 112/575 (19%), Positives = 219/575 (38%), Gaps = 34/575 (5%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 L +TR + + A+ R +E T + + +L I Sbjct: 436 ISLLLGITRDVTASMHAKQQLRIAATAFESQEGMLVTDA-------VGAILRVNQAFTRI 488 Query: 240 AGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY Y + + + + Y + Sbjct: 489 TGYTADEVIGKNPRILNSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTIT 548 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------- 346 + V + + S+ A DPLT LPN R L+ +Q Sbjct: 549 AVKDAGGNVVNYVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGR 608 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +DN + ++ G + + + L ++E + + ++ G E +++L Sbjct: 609 SGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVML 668 Query: 406 SGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 + + + + + + + D F+ N ++ LL Q Sbjct: 669 EDLSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQ 728 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KE 515 Q+ + + + + ++ L +R A+++ LY Q + Sbjct: 729 ADIAMYQAKKAGRN-TMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHR 787 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGP 573 G + +L + + G+M P +F+P+ + L VLE+ L D + Sbjct: 788 PLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNL 847 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 S+N+ Q + ++ Y I P + LE+TE N ++++ + L K Sbjct: 848 VLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKT 907 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++DDFGTGY++ + LKRL D +KID F+++I +++ D IV +I +A++ + Sbjct: 908 GVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMG 967 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VET++Q+ LL + G + QGYL +P P+ Sbjct: 968 VIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVE 1002 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 109/565 (19%), Positives = 216/565 (38%), Gaps = 34/565 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF--- 248 ++ ++ E R + + + +L I+GY Sbjct: 207 ELFFQNAEKEKRVGELRVAATVFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQS 266 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCL 305 + + + + +++T + Y+ + + Sbjct: 267 PKLFNSGRQDKAFYKEMWNSINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNY 326 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + R S+ + + + A DPLT LPN R L + + L + Sbjct: 327 VATFRDITTSKAASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDL 386 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 DN + ++ G + ++ + L ++E + + +L G E +++L + ++ Sbjct: 387 DNFKTLNDTLGHDVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLENL-SLQAIEAA 445 Query: 418 VNIL---------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 ++ N F GN+ ++ LL Q QS A Sbjct: 446 NKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAA 505 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARL 526 + + + + +R A++ L+ Q + + G + ++ Sbjct: 506 GRN-TWHFFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVSSSGQTLGAEALIRWQ 564 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTL 584 + G ++P F+PL + L VL+S L + +VN+ L Sbjct: 565 HPERGQVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQL 624 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q++ ++ KR+ I+P + LE+TE N + + L K G ++DDFGT Sbjct: 625 HQEDFVEQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGT 684 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ + LK+L + IKID FV+D++T+ D IVR+I ++ + +SV+AE VET ++ Sbjct: 685 GYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEE 744 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L G + QGYL +P P+ + Sbjct: 745 RQYLLDNGCTHYQGYLFSKPVPINE 769 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 689 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 105/568 (18%), Positives = 210/568 (36%), Gaps = 27/568 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--LLLCTPYENDFIAGYLVP 245 R + ++ + I E R L + + + + T F + Sbjct: 543 RQLAKEKHQRLRVQELIDNIDAAESRYQLLIENSLVGIFVYQHHRYTYVNPRFAEIFGYT 602 Query: 246 VFFIIFTLGVGKLRYPFLNL--------TWAVSTLCLLNYNQNFLQGVETEYSLAFIL-A 296 I+ + +L +P L L Y L+ + ++ Sbjct: 603 PEEIVDSAPQPQLVHPDDQLFVDANNLKILGGVNANHLRYEFVGLRKTGQPIDVEILIGR 662 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + L+ + + + A DPLT L N Sbjct: 663 GISEGQPALIGSLLDITERKEAEKTIEHLAFHDPLTGLANRLLFMDRIEQAIAHAHRHHE 722 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G ++ + + L ++E + + + G E ++LSGP Sbjct: 723 SFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTVSRFGGDEFNVLLSGP 782 Query: 409 ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E ++ + + + N+ + M + + L+ ++ Sbjct: 783 SHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGREAITLVKNADTALYRA 842 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 ++ + +++ + +++R ++ +L ++ QP + G + + Sbjct: 843 KDLGRN-NFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQVGLQSGRITGLEGL 901 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMP 581 + G ++ P F+PL + L VL++ L T R +N+ Sbjct: 902 VRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAGFAPMRLGINVSA 961 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + + A ++++ K + P + LEITE N + + +L G I+IDD Sbjct: 962 HQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETLRRLRAVGITISIDD 1021 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG+++ LK L AD +KID FV+++ +A I R I ++A +L V+AE VE Sbjct: 1022 FGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHGLNLKVIAEGVEN 1081 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q Q L + G +QG+L+ RP D Sbjct: 1082 QAQLDFLREAGCDEIQGFLVSRPLAAED 1109 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 689 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 132/745 (17%), Positives = 247/745 (33%), Gaps = 34/745 (4%) Query: 6 NLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVV 65 ++ I+ F + I + + L + + + + Sbjct: 54 AVVAGCGIWATHFIAMQAYGPGAG---GAYNIPVTVLSLIFAIAVTFVGLSISVSATRTI 110 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL 125 PV G + + + + LG + G + V R Sbjct: 111 PVALGGAVVGGGVAAMHYTGMMALEIPARIGWATDTVAVSIVLGIVF--GSLALVVAGRR 168 Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVV---DLLSLFTAVLIYNML 182 + + ++ +V F + + I + LS+ TA ++ Sbjct: 169 DGVANALGATVLLTVAIVSHHFTAMGAVELTPDPSIVISGLSIPPASLSVLTASAAVAII 228 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYEND 237 L ++ L R+ + E + L A ++ + Sbjct: 229 AIALAAAVLDRRAKGELGRQQVVLDTALENMSQGLCMFDADGKIMLFNERYAAMLRRTDI 288 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + G L+ V + + S+ + Sbjct: 289 ALTGRLLVDVLREEQAKGQWQGDADEFFARLVIDAREGRTTSQVVNRLGR--SIRVVNQP 346 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-------K 350 + + + A D LT LPN + EQ Sbjct: 347 MQG--GGWVATFEDITEWLEAQAKISHMARHDALTGLPNRVLFHEQLEQGLRRTGSGDQL 404 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + CL +D+ + ++ G + ++ + R L + E++ + +L G E +V G Sbjct: 405 AVLCLDLDHFKDINDSLGHPIGDALLKEVGRRLKATVGESDTVARLGGDEFAVVQIGRSE 464 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E + + L S ++ + +G + LL ++ A Sbjct: 465 EAAARCLAGRLVEVISAPYEIDDHQIVIGVSIGISLSPQDGSNADELLKNADLALYRAKA 524 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 E + + + LL +R AL + + Y QPIR+ ++ +L Sbjct: 525 DGRG-TYRFFETGMDARAQARRLLEMDLRAALQRDEFQPYYQPIRDVASGRVVVFEALLR 583 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G++ P F+PL + L + VL S AT P +VNL P+ Sbjct: 584 WNHPQRGLIAPINFIPLAEETGLIVQLGEFVLRSACTDAATWPD---DVDVAVNLSPVQF 640 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 N+ + + + + LEITE N+E+++ + +L G RI++DDFGT Sbjct: 641 RNPNLIASVTAALTVSGLPARRLELEITESVLLQNSEATLTTLHELRAMGVRISLDDFGT 700 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+ D IKID FV ++ T I+R++T L ++ + AE VE Q Sbjct: 701 GYSSLSYLRSFPFDKIKIDRSFVSELATREDSMAIIRAVTGLGRSLGIVTTAEGVENDAQ 760 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 LL + G QGYL +P+P +D Sbjct: 761 LELLRREGCTQAQGYLFSKPRPASD 785 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 98/567 (17%), Positives = 189/567 (33%), Gaps = 27/567 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + + A R A + L + I GY Sbjct: 391 LLFSLVDVTDRQKATAQLRLIETAFQHTRDAVLITDARARI------LRVNPAFETITGY 444 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + A+ T + + ++ + Sbjct: 445 SAGEVVGRTPRMLQSGRHDGAFYRRFWRALETEGHWSGEIWNRHRDGHIFPAWQSVSAVK 504 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + + + + D LT LPN + Sbjct: 505 GPDGSTTHYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRK 564 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G + + + + + + + + G E +++L+ Sbjct: 565 QIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILADS 624 Query: 409 ETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + ++ ++ L + + + + L+ + Sbjct: 625 DAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAK 684 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 + +S T+++ L N + AL G+ LY QP ++ G + ++ Sbjct: 685 SLGRN-TYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALI 743 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPL 582 + G + P +F+PL + + R VLE + +VNL PL Sbjct: 744 RWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPL 803 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L + + ++ L ++P + LE+TE + + +L + G R +IDDF Sbjct: 804 QLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDF 863 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L R D +KID F++D+ A I R+I LAK L VVAE VET Sbjct: 864 GTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETA 923 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L + G QG+ RP P + Sbjct: 924 EQLEFLERAGCDGAQGFYFSRPVPADE 950 Score = 42.7 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 8/99 (8%) Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 Y + I G V V + G P L + ++ + L Sbjct: 190 AERMWGYAAEEIIGQPVTVLPPLAKQGE-----PGQILRRVIDEHEVVRFESRGLHKDGR 244 Query: 288 EYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWH 323 ++ ++ ++ L + ++R E L Sbjct: 245 DFPISLTVSPLFDAENRLTGVSAIIRDITEMERLKATLQ 283 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 98/555 (17%), Positives = 205/555 (36%), Gaps = 23/555 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSW-LAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFT 252 R+ + T + L S + I GY + Sbjct: 399 ITERRKGEHDLRLAQVLFRTTNEALMISSRDNKIEMVNPAFSRITGYQLDEVLGKGPDLL 458 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMV 309 + + A+ + Y +A + +V + Sbjct: 459 QSGRHDAPFYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIATVTNDKGETVQYVAAF 518 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 + + QA D LT LPN + + +D + Sbjct: 519 SDITKRKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRSQRSGQQVALLFIDLDRFK 578 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 F++ G + +R + L ++E++ + +L G E ++L + + + Sbjct: 579 FVNDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTVILPELHGPEGVARLAQGM 638 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + L + + + + + L+ ++ + + Sbjct: 639 IDKLEERYCIQDHELFISASIGITIYPEDADNMMDLVKNADVAMYRAKENGRG-SFCFYT 697 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTP 535 ++ + + +R AL++G ++ QP + G + ++ G I+ P Sbjct: 698 AEMNADARQLHKIEQALRVALEEGQFWIHYQPYVQQSSGLITGVEALIRWRNSAGEIVYP 757 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 D+F+P+ + L L VL S++ +A + FSVN+ + ++ G+I Sbjct: 758 DQFIPVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDITFSVNVSARQFQEGHLVGQIK 817 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + I+PQ+++LEITE + E ++ ++++ G R+A+DDFGTGY++ LK+ Sbjct: 818 AALQENQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGVRVALDDFGTGYSSLGYLKQ 877 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D++KID F+ I + D +V +I +A + + V+ E +E QQ ++ Sbjct: 878 FPIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGEGIENDQQLQRVNLHACD 937 Query: 715 YLQGYLIGRPQPLAD 729 Y+QG+ RP P + Sbjct: 938 YVQGFFYSRPMPYDE 952 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 123/766 (16%), Positives = 239/766 (31%), Gaps = 60/766 (7%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW---------- 61 I + + + + LA W+ + F+ W Sbjct: 203 GILLMMIVVALGFDAYAGSRVALAYAFYCVALQVWLVQNFGIGSAFVPFWPGPEYFPILQ 262 Query: 62 -RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 V V+ G+ C L L A + G LC G R + S Sbjct: 263 AVSVAGVVLGIGCAVLEFLQLRGRVRAAIGGFVVLSALCFLGSAWHATGYRAGAAVLSVL 322 Query: 121 V---WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 L ++ +G+ + + + + L Sbjct: 323 AVATMVLLVRGVFSGDASLRLFTLGLGATMVGGGVQAFSVVGSGLEVGRLAAFAFPLGSL 382 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPY 234 + I R + E + + W +L++ +C Y Sbjct: 383 CQAAFWLAAL---------IIRLRSEHRELHELEGKQAAIMWAMPDLILVIDRQGICLDY 433 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV----ETEYS 290 + + + V ++ L L + + + + Sbjct: 434 KQPYATRFFVTGDELLGKDVSAVLPSATAGTIRQGIERALHQGDLQSVFLDLPVEGSMHH 493 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 +A ++ +VR + + A D LT LPN ++ + Sbjct: 494 YEARIAP--HGPDKVVVVVRDITLQKHSEEKIRRLAYFDTLTGLPNRQSFLERLDRELLR 551 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ------- 395 + L +D + ++ G ++++ L ++ + + Sbjct: 552 ARRTNHRMALLFLDLDGFKRINDTLGHSAGDCLLQTVADRLQEKLRAGAFIARPALDESS 611 Query: 396 -----LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 L G E +VL +T + + R + + F + Sbjct: 612 LHFARLGGDEFTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEIAVTSSIGIALFPDD 671 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 LL + + ++ +TT ++ L IR L++G+ L+ Sbjct: 672 GADAATLLKHADTAMYYAKEQGRN-NWQLYDRTLTTRTTARLALEGDIRKGLERGEFRLF 730 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ G+++P +F+P+ + L VL + + + Sbjct: 731 YQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTAACRQVR 790 Query: 565 THPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 R +VN+ L + + I+ + LE+TE Sbjct: 791 QWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTESILMDPEAKR 850 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +L G +IDDFGTGY++ +KR +KID FV + + DA I +I Sbjct: 851 IKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDAGITTAI 910 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A++ +L VVAE VET++Q A L + LQGYL P P + Sbjct: 911 ISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDE 956 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 105/566 (18%), Positives = 204/566 (36%), Gaps = 19/566 (3%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + R + R + E A + + + + Sbjct: 406 ALMSIGRSFGVAIQRESSDHRLHQAKIAFESTAEGIFITDDELRTIAINQGFTDITGYTE 465 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--- 298 V K P + A++ + +Y+ L + Sbjct: 466 DDVLGNIPNVLEADLKKPEPHREIWKALTREGRWRGEFWNQRKNNEQYAEWVTLTAVNNE 525 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + + R + DPLT LPN R + + ++ Sbjct: 526 EGKVINYVGVFADISEIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEI 585 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G M + + + + +++++ + +L G E ++++ Sbjct: 586 ALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLRE 645 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + L + + + + L+ Q Sbjct: 646 REDAAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKN 705 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 +S ++ L N +R AL + +Y Q + G + ++ Sbjct: 706 KGKN-NHCFYSADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIR 764 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 + + G+++P KF+PL + L VL + SVN+ + Sbjct: 765 WIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQ 824 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + N A + + + LEITE N E + +++ G R+AIDDFG Sbjct: 825 IQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFG 884 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL D IKID FV+D+ N+ DA I +I +A++ +V+AE VET+Q Sbjct: 885 TGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQ 944 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q + L K+G Q QGYL RP ++ Sbjct: 945 QASFLKKIGCQQGQGYLYSRPVTASE 970 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 110/569 (19%), Positives = 215/569 (37%), Gaps = 30/569 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + I + + + ++ A ++ I GY Sbjct: 759 LVGVMLDITERKRMEARLLQAATVFDSSAEG---ITITAPDGNIIA---VNRAFTEITGY 812 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + R +L++ A+ T + + + ++ + Sbjct: 813 TEDEVIGRNPRMLQSGFQDRRFYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAVK 872 Query: 300 SFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + + QA DPLT LPN L E Sbjct: 873 DAQGKVAHYVGVFSDITELRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDET 932 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 G + + +D + ++ G + + + L LM+E++ + +L G E L+V+ Sbjct: 933 GLAVFFIDLDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDV 992 Query: 409 ETEGRLQHMVNILN----SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + H+ + + + +G F + + L+ + Sbjct: 993 GEPTAVSHIAEKILNVLQASPVTVE-HEFFVGASIGISVFPQDGADAETLMKNADVAMYR 1051 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + + + ++ + ++ + +R A+++G+L +Y QP + + G + Sbjct: 1052 AKERGRN-TYEFFTKDLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEA 1110 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLM 580 ++ L+ G++ P +F+ L + L V + AT P SVN+ Sbjct: 1111 LVRWLRPQQGLVLPGEFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVS 1170 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + + I R + + + + LEITE S+AE+S+ ++ L G + ID Sbjct: 1171 GVEFARGRIQQTARRTLELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVID 1230 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKRL + +K+D FV+ + +T D I R++ L + L+V+AE VE Sbjct: 1231 DFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVE 1290 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ Q+ L G +QGYL GRP P D Sbjct: 1291 TEAQREFLTGEGCDEMQGYLRGRPMPFDD 1319 Score = 43.8 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 19/203 (9%), Positives = 38/203 (18%), Gaps = 23/203 (11%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG- 209 + D V + + + + + + A+ R+ Sbjct: 583 FDGELLYQRRDGTPIWVHAIGRTIGESADSETWIWAYADVTAQRAAEQALRQSHLELEQR 642 Query: 210 ----------KEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFFIIFTL 253 + L V L C + I V Sbjct: 643 VADRTLELSQQLHFMRQLIEAIPGPVFYKSQEGRYLGCNQAFLELIGKSRDEVVGATVYD 702 Query: 254 GVGKLRYPFLNLT--WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYM 308 ++ L Y L + F A L+ + Sbjct: 703 VAPADLADRYKAADDELLARLGSQVYEARVLDADGHYRDVIFHKATYGKPGENGGGLVGV 762 Query: 309 VRIYHRSEWLNRRWHLQAL-TDP 330 + + + R A D Sbjct: 763 MLDITERKRMEARLLQAATVFDS 785 Score = 42.7 bits (100), Expect = 0.060, Method: Composition-based stats. Identities = 8/135 (5%), Positives = 25/135 (18%), Gaps = 10/135 (7%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND--------FIAGYLVPVFFI 249 R+ + + A + L + + G L+ Sbjct: 373 TEKRQADRAMEALLREQALIFERAPTGIAFLRDRVIQRCNPSFERIFGYAPGQLLGQSTR 432 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLY 307 + R + + T ++L + + ++ Sbjct: 433 VCFASEAAWREAGERAYAVADESGKFIGELEYCRADGTPIWCQVTGSLLNPANPAEGYVW 492 Query: 308 MVRIYHRSEWLNRRW 322 + Sbjct: 493 LFEDVTARRAAEEAL 507 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 103/563 (18%), Positives = 200/563 (35%), Gaps = 31/563 (5%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP------YENDFIAGYLVPV 246 ++ A L E++ LA + + + L D + + Sbjct: 817 IATDMTKRKQAEAALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDALGYTAQEL 876 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY---NQNFLQGVETEYSLAF---ILAVLIS 300 + FT L++ + + + ++ Sbjct: 877 LALTFTEISHPTERALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAILKVVLVRDAQG 936 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KS 351 + + V + + + A D LT LPN E + Sbjct: 937 QPLHYISQVVDISDRKRMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAGQRWDYLCA 996 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G ++ + +I L ++ ++ L +L G E ++L Sbjct: 997 VIVLDLDRFKVINDSLGHLVGDRLLSAIAERLQGCLRPSDTLARLGGDEFTILLDDIPNT 1056 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + + LL ++ Sbjct: 1057 AAATDIAKSIHQTLESSFNLDGYEVFATASIGIALSGMGYHRAEDLLRDADTAMHRAKLQ 1116 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + +SG+ Q+ L +R A+++ +L +Y QPI + + G++ ++ Sbjct: 1117 GTA-CYVMFDTAMSGRALAQLRLETELRWAIERQELEVYYQPIISLGTGKITGFEALVRW 1175 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPL 582 + G+++P F+PL + L VL + L SVNL Sbjct: 1176 QHPEQGMISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGK 1235 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q N+ +I ++ + ++P + LEITE +++S+ +E+L ++ IDDF Sbjct: 1236 QFSQTNLIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDF 1295 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ RL + D +KID FV + + IV++I LA + VVAE +ET Sbjct: 1296 GTGYSSLSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETN 1355 Query: 703 QQQALLHKLGVQYLQGYLIGRPQ 725 Q A L +Y QGY +P Sbjct: 1356 MQLAQLRGRRCEYGQGYFFSKPL 1378 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 10/146 (6%), Positives = 29/146 (19%), Gaps = 6/146 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 F + I A+ R+ + + W A+L + P Sbjct: 686 FVGIQTDITKRKQAEEALRQSEEKLDSILRSLDDVVWSASLENQQFIYLNPATERVYGRP 745 Query: 243 LVPVFFIIFTL---GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + R + + + ++ L ++ Sbjct: 746 VSDFVDCPSLWQFVIHPDDRQRVERASNRMMHQGSKDLEYRVVRPDGEVRWLRDRARLIY 805 Query: 300 SFSVCLL---YMVRIYHRSEWLNRRW 322 + + + + Sbjct: 806 DHRGIAIRMDGIATDMTKRKQAEAAL 831 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/241 (8%), Positives = 52/241 (21%), Gaps = 27/241 (11%) Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 + G + V L + G D P+ VV Sbjct: 466 LKAGVGWSPGLVGYALVGANRNSQAGYNLISQEPVVVEDLPIDTRFSGPPLLYNHRVVSG 525 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP---------SLGKEKRAFTLSWL 220 +S+ F++ A E + + Sbjct: 526 VSVVIPGQE-QPFGVLGAHTTSQRRFSEDDIHFLQAVANVLALAIGHQQSEANLYLMQRA 584 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL--------------RYPFLNLT 266 A S +++ P + D Y+ P F + ++ + L Sbjct: 585 IAASNNGVIITDPNQPDNPVIYVNPAFESMTGYTAKEVIGHNCRFWQEPDYNQAGVTKLA 644 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 A+ + + + + ++ + + + + + Sbjct: 645 TAIQEQRECHVILQNYRKDGSTFWNELYVSPVFDGDGYLTHFVGIQTDITKRKQAEEALR 704 Query: 324 L 324 Sbjct: 705 Q 705 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 103/508 (20%), Positives = 196/508 (38%), Gaps = 17/508 (3%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 F G + I G++ + ++ A+S N + + S+ LA Sbjct: 180 FAPGSALGRACICRDGVPGEVCNGYTDICQAISRGTEGYTVLNLERENGAQQSVELFLAP 239 Query: 298 LI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EA 348 + + ++ +R QA D LT LPN L Sbjct: 240 VENESGDVTHFIGVLNDVTARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGR 299 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ YG + IR + + ++ + + +L G E +++L Sbjct: 300 LTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDL 359 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + L S + + L + + + LL ++ Sbjct: 360 ASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRA 419 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + +++ + + +R AL G+L + QP + G + + Sbjct: 420 KERGRN-NYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEAL 478 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 + + ++ P +F+ + + L QVL + + + +VNL Sbjct: 479 VRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSG 538 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q ++ ++ + + LEITE A ++A+ S+ + L + G +AIDD Sbjct: 539 HQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDD 598 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR D +KID F++ I + D IV++I +A++ LS++AE VET Sbjct: 599 FGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVET 658 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ L G + QG+L GR P D Sbjct: 659 PAQREFLVAQGCRSGQGFLFGRAMPAED 686 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 117/570 (20%), Positives = 201/570 (35%), Gaps = 29/570 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT-LSWLAALSVLLLLLCTPYENDFIAG 241 F R I + R E T S CT Y + I G Sbjct: 456 FRTSGRDITERKQVEAELRIAAVAFDSMEPMMITDASATILRVNSAFTECTGYTAEEIVG 515 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--- 298 V F + + + + Y ++ + Sbjct: 516 QTPRVLR-----SGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSD 570 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GK 350 + + R A D LT LPN L Q Sbjct: 571 NGTVSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACG 630 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-- 408 + + +D+ + ++ G ++ + R L + E++ + ++ G E ++VL Sbjct: 631 ALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHK 690 Query: 409 ---ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 E + + + + + H F G+Q ++ LL Q Sbjct: 691 NRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAM 750 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK-EGEGYDE 521 +S A+ + + ++ L +R A++ LL+ Q G + Sbjct: 751 YKSKERGRN-AVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGTRVTGAEA 809 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNL 579 ++ GI+ P +F+PL + L VLE+ LA D +VN+ Sbjct: 810 LVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNV 869 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + + ++ + R P + LE+TE N + + + L G A+ Sbjct: 870 SVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFAL 929 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFG GY++ LKRL D +KID FV+D++ ++ DA+I R+I LA++ L V+AE V Sbjct: 930 DDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGV 989 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET+ Q+ L G QGY RP P+ D Sbjct: 990 ETEAQRDFLAAAGCYAYQGYYFCRPLPIED 1019 Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 15/170 (8%), Positives = 36/170 (21%), Gaps = 13/170 (7%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS-----WLA 221 L T + +L M+ A L E++ ++ W Sbjct: 305 AALPIASTGTGLSLLLALLTWLMMTGRGRAMRLASAMTKELRENEEKFRAIADCTVNWEI 364 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW-----AVSTLCLLN 276 + GY V + + + A+ L + Sbjct: 365 WWGTDGKPRWINSAVEAYIGYTVDECMALPDFAGTVIYPADIPRVAPEFQKALQGLRGDD 424 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWH 323 ++ + L+ + + R + + Sbjct: 425 LEFRCVRKDGSLMWLSASWVPITDSKGEFIGFRTSGRDITERKQVEAELR 474 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 90/554 (16%), Positives = 201/554 (36%), Gaps = 28/554 (5%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + + + + S+++ ++ GY +L + Sbjct: 670 SARRRAEATLELWGRVFECTSESIMITDAAQRIVSVNQAFCATTGYRAEEIIGQSSLALR 729 Query: 257 KLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVR 310 + F L + ++ + + + Sbjct: 730 SDVHDGIYFRQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIALFT 789 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + +R A D LT LPN + + + +D+ + Sbjct: 790 DISAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKN 849 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI-- 420 ++ G + + + L +++ + + +L G E +++L+ E +++ ++ Sbjct: 850 INDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDSHQIEEIMKHRL 909 Query: 421 --LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L + L F + LL ++ Sbjct: 910 LPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRN-NYHFYT 968 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 E ++ + +++ + ++R +++ +LLL+ QP + + G + +L D G+++P Sbjct: 969 EELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHGMISP 1028 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 +F+P+ + L QV+ + + L+ S+N+ + + ++ Sbjct: 1029 MEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDLV 1088 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +L + +SP + LE+TE +A ++ +E L GF +IDDFGTGY++ L R Sbjct: 1089 QLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHR 1148 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +KID F++ ++ D I+++I L + V+AE VE + + L G Sbjct: 1149 FPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCD 1208 Query: 715 YLQGYLIGRPQPLA 728 +QGY + RP Sbjct: 1209 GIQGYFVARPLTPE 1222 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 99/551 (17%), Positives = 205/551 (37%), Gaps = 23/551 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII---FTLGVGK 257 + + + E + + + + L+ + I GY F G+ Sbjct: 257 QDLLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSSEEAIGRNCKFLQGMDT 316 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYH 313 + L A+ + + + +A + + ++ Sbjct: 317 DQPELGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHFVGVLYDVT 376 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSR 365 + + QA D LT L N L + + S + +DN + ++ Sbjct: 377 QIKRYQEDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVND 436 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G I ++ L +++ + + ++ G E +L+L+ ++ + + Sbjct: 437 SMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAEL 496 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + RF + E + LL ++ + + ++ Sbjct: 497 IKPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRAKSSGRN-NFQFYTKEMN 555 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 + +++ L + + AL +L L QP + G + ++ G++ P F+ Sbjct: 556 ATSGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFI 615 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ L + VLE+ + + R ++NL L +N + + + Sbjct: 616 PMAECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIE 675 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + P + LE+TE N E + + L+K G ++++DDFGTG+++ LKR D Sbjct: 676 AIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPID 735 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ + ++ DA+I ++I LA + V+AE VE + + L K G QG Sbjct: 736 RLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQG 795 Query: 719 YLIGRPQPLAD 729 Y I RP D Sbjct: 796 YFISRPLTFDD 806 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 102/565 (18%), Positives = 202/565 (35%), Gaps = 28/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY---------ENDFIA 240 + E R T+ ++ + T + + Sbjct: 385 RRQVAHKTQSLTLALDELAESEGRFRTIFDHVNDAIFIHRADTGRLLMVNQRMRDMYGMG 444 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTW--AVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 V + W A + ++ + + + + + + + Sbjct: 445 DLPVDRIDVGMCSAGVSPYGAAEAQVWLRAAAAGQPQQFDWHARRLDGSLFWVEVSMRLA 504 Query: 299 I--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 LL +VR + R A DPLT LPN L+ + Sbjct: 505 RFSDGQNRLLVVVRDITERKNAQDRLEFMAHHDPLTELPNRLLLQDRVDRAIALAEREGR 564 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G ++ + L ++E++ + +L G E ++VL+ Sbjct: 565 RVALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEFVIVLNAV 624 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + ++ + I + F + L+ + + Sbjct: 625 RDADGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAAMYHA 684 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 ++ + L + + AL++G+ LY QP + G + + Sbjct: 685 KESGR-STYRFFAARMNADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAVVGAEAL 743 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 + + G+++P +F+P+ L VL + A +VNL L Sbjct: 744 IRWNHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQACRQAALWQAGGHALTMAVNLSAL 803 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + ++ + + ++P ++ LE+TE + E+ M +L G +++IDDF Sbjct: 804 QFRRGDLERAVREALEESGLAPHSLELELTESIMIQDHEAVMDMTRRLGALGVQLSIDDF 863 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID FV+D+ T+T +A I ++I +A + L V+AE VE Sbjct: 864 GTGYSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEVIAEGVEVT 923 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 + L G QG+L GRP Sbjct: 924 EVVEFLRDHGCDLAQGFLYGRPMTA 948 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 107/630 (16%), Positives = 224/630 (35%), Gaps = 38/630 (6%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR-------- 188 + ++ I+ + + + LLSL T Y R Sbjct: 152 ALYLGIIACLSFLGFAIALWLANVSSNRLSQRLLSLETTAHNIISNGNYSLRAQKVENDT 211 Query: 189 ---MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGY 242 + + + +++ E++ ++ + + + + C + Sbjct: 212 ISNVTTNFNQMLDFFQQQDTQLRDSEEKFRLINETSKVGIFQLDINGTCVYANTELSLIT 271 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLT---WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 +PV I+ + + + + W V + + N +A + +L Sbjct: 272 GLPVNEILESNWLTAIHPEDRSTVEEQWQVMLDNNQSLDLNCRLKTPQTKFIAAYVRLLR 331 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 + + + + ++ A D LT L N R E ++ Sbjct: 332 RSDGRLIGYIGAINDVSEIKNAQTQFEEMAYYDMLTGLANRRLFRNRLEHVVSNLKKEQS 391 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + +D + ++ G ++ + L ++ ++ + +L E ++L G Sbjct: 392 SLGLILVDLDRFKSVNDAMGHDAGDKLLKIVAGRLQQCVRASDTVARLSSDEFAIILPGI 451 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + H+ + + + N T + N + ++ + Sbjct: 452 KNSRTTAHVAEKVLTAIQQPVLINETEQRLTASIGIAIAPQNGTDAKTIIKNADLALFHA 511 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEI 522 + ++ Q +V L + ++ A+ D L QP + G++ + Sbjct: 512 KDNGRN-NYQFFTVEMNIQLIDRVALTHDLKQAVKNSDFTLVYQPKICLKQGNLVGFEAL 570 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KKGPRFSVNL 579 + G + P +F+P+ Q L V+ + + L T + +VNL Sbjct: 571 IRWNHKIRGAVGPTEFIPVAEQTGLIIPLGRWVITTACEQLRTMYDEEIVNDSVSMAVNL 630 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 +++ I + I P +E+TE N ++++ +E L + G +I+I Sbjct: 631 SAHQFQDEHLVDFIRDRINTFDIKPGQFEIELTESVLMENFDNAIEKLEALRQLGIQISI 690 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL + +K+D FV DI + D I ++ +A + +VVAE V Sbjct: 691 DDFGTGYSSLGYLKRLPVNTVKVDRSFVTDIPNDKSDMEITSAVIAMAHNLNYTVVAEGV 750 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET+QQ L G Y QGY +P P + Sbjct: 751 ETEQQLQFLEHSGCDYGQGYFFSKPLPDHE 780 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 98/493 (19%), Positives = 188/493 (38%), Gaps = 29/493 (5%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEW 317 P + ++ L+ + + + L + + ++ R Sbjct: 288 PLCQVLKTGKEAREIH---EHLRAGHEKRTYEIKASPLYNEDHSIRGIIETSRDLTDILN 344 Query: 318 LNRRW----HLQ---ALTDPLTLLPNFRALEQAPE------QEAGK--SFCCLRIDNLEF 362 D LT LPN E + + + +D + Sbjct: 345 SEAELNEKTQHLQFVTTHDQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKH 404 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + ++ + + L +++ + L ++ G E L+++ + + + Sbjct: 405 INDSLGHEIGDQLLQEVAKRLSTSIRKTDTLARMGGDEFLIIIEDIKELSHVSTVAKNFI 464 Query: 423 SR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + L + + + + LL Q+ Sbjct: 465 DTILPSFTIDGHELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKC-QFYTA 523 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 ++ + ++ L + +R A++Q +LY QP + E G + +L G+++P+ Sbjct: 524 EMNSRAKTRIELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPN 583 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIR 595 F+PL + + VL+ R +VN+ P + I R Sbjct: 584 DFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIER 643 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + I P+ + LEITE + +S++ ++QL G +AIDDFGTGY++ LKR Sbjct: 644 VVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRF 703 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +KID FV+DI T+ DA I +++ LA + +L VVAE +ETQ+Q L + G + Sbjct: 704 PLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEV 763 Query: 716 LQGYLIGRPQPLA 728 QGYL P Sbjct: 764 GQGYLYSPPVAKE 776 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 112/582 (19%), Positives = 215/582 (36%), Gaps = 33/582 (5%) Query: 174 TAVLIYNMLFYYLT---RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL-SVLLLL 229 + L+ ++F+ R V A+ R +E T S L + Sbjct: 334 VSTLLLGLIFFSSLKHARTHVRAQLAETDLRIAATAFESEESMIITDSRGIILKVNQVFT 393 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 T Y ++ G + + + + + Y Sbjct: 394 ATTGYTSEEAVGKTPSLL-----KTDRHSAEFYHEMWRQIKQTGKWQGEIWDKRKNGEIY 448 Query: 290 SLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + + + + + A D LT LPN R L Sbjct: 449 PKLLNIYAVKSKNGVVTHYVGSYTDLTERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNY 508 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + +D + ++ G + ++ + L ++E + + ++ G Sbjct: 509 ALASGLRTGKNGALLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGG 568 Query: 399 SELLLVLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQET 450 E +++L E + + + + + F N ++ Sbjct: 569 DEFVVMLEDLNIESVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQS 628 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 L Q Q+ L ++ + + + L +R AL L L+ Q Sbjct: 629 QDEPLKQADIAMYQAKKSGRNK-LRFFDQRMQDTISSRANLEAELRKALANEQLQLHYQI 687 Query: 511 IRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + G + +L + GI++P +F+P+ + L L VLE+ L Sbjct: 688 QVDSAHQTIGAEVLLRWIHPVNGIISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQD 747 Query: 569 --DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 ++N+ Q A + + +R+ I+P + LE+TE +N + ++ Sbjct: 748 NPATAQLILAINVSARQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIAT 807 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L +FG + ++DDFGTGY++ + LKRL +KID FV+D+ T D IVR+I + Sbjct: 808 MRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAM 867 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A + +L+V+AE VET+ Q+ +L K + QGYL G+P P+ Sbjct: 868 AHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKPMPIE 909 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 103/565 (18%), Positives = 212/565 (37%), Gaps = 27/565 (4%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVP 245 A+ + + + K A + ++ V + + I GY Sbjct: 140 EELRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEE 199 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL---AVLI 299 + + ++ T + + + + + Sbjct: 200 EVIGQNPSILKSNRHKPSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITDVK 259 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKS 351 V + + R ++ R+ QA D LT LPN L +++ + Sbjct: 260 GEVVNYIAVFRDISEAKASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASSNDRKSCIA 319 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G ++ ++ + + E + + ++ G E +++L + + Sbjct: 320 LLFIDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVIMLKDLQDK 379 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 M + + ++ + + + + + +T L+ ++ Sbjct: 380 HDAAVMADTIINLFAQALTVESHQFTITPSIGIALYPEDGKTPYSLVRNADTAMNKAKQE 439 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILAR 525 ++ +++ + N +R +Y QP N G + ++ Sbjct: 440 GRNR-YHLFTPGLTESALRRISMENQLRQTASDNGFTVYYQPKVNLHDNTIVGMEALIRW 498 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTL 584 ++ DG I++P +F+PL + L QVLE+ + SVNL Sbjct: 499 IQPDGTIISPAEFIPLAEETGLIVPIGEQVLEAACLDTVELNQRFGTNLKVSVNLSLRQF 558 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q+ + I+ + I P + LEITE + E + +E++ K G ++IDDFGT Sbjct: 559 KQEQLMKNIMDIIAMTAICPSCLELEITESTVMDDIEQTKTILEKMDKLGITLSIDDFGT 618 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK + +KID FV + N D +V++I LA++ LS VAE +ET +Q Sbjct: 619 GYSSLSHLKNMPMHTLKIDQSFVAGLPHNKSDQKLVKAIMSLARSFDLSTVAEGIETPEQ 678 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + +LG + +QGY P PL + Sbjct: 679 YNYMRELGCEVMQGYYYSPPVPLEE 703 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 111/557 (19%), Positives = 225/557 (40%), Gaps = 31/557 (5%) Query: 202 RDIAPSLGKEKRAFT---LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFII--F 251 DI L E++ + + +++ ++ I GY Sbjct: 767 LDITDRLSAEEKLRLNAKVFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPH 826 Query: 252 TLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLY 307 L KL F + W ++ + + Y+ ++ + + Sbjct: 827 MLASEKLEESFYSAMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKISQHIG 886 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDN 359 ++ + R + DPLT LPN L + + + +D Sbjct: 887 IISDISERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDR 946 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 +F++ G + ++ + + M+ + + + G E +L+L + EG H+ Sbjct: 947 FKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTDAEG-AAHVAK 1005 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L ++ +++ + + + + E+ + L ++ Sbjct: 1006 KLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRN-NFQF 1064 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIM 533 + Q +LL + +R+A++ + LLY QP + + G + ++ + G++ Sbjct: 1065 FARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGLV 1124 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGR 592 +P F+P+ + L A VL + +K LA+ G +VNL + Q + G Sbjct: 1125 SPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGS 1184 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + ++ + + P + LE+TE A ++E ++ + QL+ G R++IDDFGTGY++ L Sbjct: 1185 VCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSYL 1244 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K+ + D +KID FV+ I ++ DA I+ +I +AK+ S +AE VET +Q L Sbjct: 1245 KKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANS 1304 Query: 713 VQYLQGYLIGRPQPLAD 729 +QGY +P P + Sbjct: 1305 CDEIQGYYFSKPLPSTE 1321 Score = 58.5 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 18/193 (9%), Positives = 49/193 (25%), Gaps = 17/193 (8%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + G+ + + + F + L++L + L F ++ S A+ ++ Sbjct: 298 VGGTKWTLFFQTTPAFETRILPYGKPMLVALLGSTLTILSAFLAWF-LLSSRQLAESRYQ 356 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + + A ++ + + + + L V T Sbjct: 357 KLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINNVTKHPEFNTNL 416 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 ++ + + + + L ++R + R Sbjct: 417 ISDIPT--------KDEWQYRRKDGSRFIAEVNCRKLD--KNYYFTIIRDLTERKLAENR 466 Query: 322 WHLQALTDPLTLL 334 LT L Sbjct: 467 ILH------LTQL 473 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 93/550 (16%), Positives = 198/550 (36%), Gaps = 24/550 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 D + + + + ++L+ +L + GY + + + Sbjct: 489 DRKAAEESLNLSKQVFDNTSEAILIADRDRNILEVNQAYLDMTGYGREDCVGTYLALLDE 548 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHR 314 + V + Y ++ + + ++ + Sbjct: 549 PAGGGQLIGNLVQQHGKWMGELLAQKRSGEYYPAWVSISTVHDNHGSLQNYVVVLTDISQ 608 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + R A D LT LPN L++ + + +D + ++ Sbjct: 609 RKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDT 668 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NS 423 G ++ + L +++ + + + G E ++++ + L ++ + + Sbjct: 669 LGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALA 728 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + L + + + + LL ++ + Sbjct: 729 QPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKN-TFHFYSADGNA 787 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLP 540 + ++ L N++R AL++ + L Q + G + ++ + G+++P F+P Sbjct: 788 NSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIP 847 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + + VL+ + + R VN+ + ++ I + Sbjct: 848 VAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEE 907 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 ++P + LEITE NAE + ++ G + IDDFGTGY++ LK D Sbjct: 908 SGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDS 967 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DI ++ D I ++I +A + ++VVAE VETQ Q L G LQGY Sbjct: 968 LKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGY 1027 Query: 720 LIGRPQPLAD 729 + RP + D Sbjct: 1028 IFSRPLVVED 1037 Score = 66.6 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 27/313 (8%), Positives = 74/313 (23%), Gaps = 13/313 (4%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCG-MFCTNLWNFH 80 +V +S +S + +F + ++ L + + +L Sbjct: 62 LVGAVISPLLSATSGALGLRLFGVVPDSDLHVTWLQWWMGDALGIILLTPAILACFHYEP 121 Query: 81 LSFLQTAVMLGSQTFVVLCACAILRW--QLGTRWRYGLTSRYVWQRLFWLGLVT--PIGI 136 + + + ++ +L L + L + V+ + W L Sbjct: 122 IRWTRAKLLEAVSLASMLLGLCFLAFNDLLSQAGELEAKAFLVFPLVIWAVLSFHQRGAA 181 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 S+ +V + FF + + + L+ + L+ + V A Sbjct: 182 AASLLIVMTALWGGGGYHGFFSMEISNAALFNYWMF---ALVTVSIGVGLSGLHVGRLQA 238 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 R+ + + ++ I GY + + Sbjct: 239 DERLRQQLGLYNALSNAQSDAGEGVMVIEDGKIIYANEAVRKIGGYDARDISMGSSFLSL 298 Query: 257 KLRYPFLNLTWAVSTLCLL-----NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRI 311 + Y + + + A S ++ ++ Sbjct: 299 IHPSDRERVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAANYRDGSERIVVLIID 358 Query: 312 YHRSEWLNRRWHL 324 + Sbjct: 359 ISSRKQAEEALLQ 371 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 116/570 (20%), Positives = 204/570 (35%), Gaps = 35/570 (6%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---- 248 I E L+ + ++ F+ + Sbjct: 659 IAGIAIERHHSEEQLKLLETSIARLNDIVLIAEADSEGKQNPRIIFVNKAFERLMGYTAE 718 Query: 249 ------IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F G + + + + E L + + + + Sbjct: 719 EVLGKDPGFLDGPNTQMEELWRVKALLKQGESVRTELVNYRKNGEEIWLEMDILPIANSA 778 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKS 351 + + R + R A D LT LPN L EQ + Sbjct: 779 GVFTHWVSVQRDITERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGA 838 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---- 407 L +DN + ++ +G + + + LL ++ + + +L G E ++V+ Sbjct: 839 LLFLDLDNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQ 898 Query: 408 -PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF-DGNQETLQPLLGQLSWLA 462 + + + S+ + F + Q T+ LL + Sbjct: 899 GCNAAQEASLVADKILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAM 958 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYD 520 ++ A + + TK+ + +R AL + ++ LY QP + G + Sbjct: 959 YEAKAAGRN-TFRFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQGSLLGAE 1017 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVN 578 ++ G+++P F+ L + L VL + L + G SVN Sbjct: 1018 ALVRWEHPQQGLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVN 1077 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L Q + R+ + K +PQ++ LE+TE N E + + L G + Sbjct: 1078 VSARQLHQHDFIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFS 1137 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LKRL +KID FV+D++ ++ DA IV++I L + VVAE Sbjct: 1138 MDDFGTGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEG 1197 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VE+ +QQ L K G QGYL GRPQP Sbjct: 1198 VESWEQQQFLEKHGCLEYQGYLFGRPQPAE 1227 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 105/563 (18%), Positives = 211/563 (37%), Gaps = 25/563 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--LCTPYENDFIAGYLVPVF 247 I S ++ + E + +L + + V ++ + I Sbjct: 365 IYSIAKDITTKKQAENALIEAESKYRSLVEKSIVGVYIIQKNIILYANPYLIDMLGYKEA 424 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTL----CLLNYNQNFLQGVETEYSLAFIL-AVLISFS 302 I ++ + + + L + + L + ++ S Sbjct: 425 IIGMSIWDIVYPDDYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIMYQGS 484 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCC 354 ++ + + A D LT LPN R E+ E + Sbjct: 485 PAVIGTILDVTERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMY 544 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D ++++ G + + + + L ++E + ++ G E ++L Sbjct: 545 LDMDRFKYINDSLGHAVGDQLLIAFSKRLQEQIRETDFAARMGGDEFTVILPHIRDNNSA 604 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + L + + + + L+ ++ Sbjct: 605 IEVARRIIERTREPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKN 664 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ QT K L +R A+ + +L +Y QP N E G + ++ Sbjct: 665 -GYQIFTSSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWNHP 723 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 + G+++P++F+P+ + L V ++ + S+N+ L K Sbjct: 724 EWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLSK 783 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I ++ + P + +EITE NAE+ M+ ++ L+K G I++DDFGTGY+ Sbjct: 784 DFMDAIQQILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTGYS 843 Query: 648 NYERLKRLQ--ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 + LKR + +I+KID F+ D+ + D I+ +I LA+ ++SVVAE VET +Q Sbjct: 844 SLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQL 903 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 +L L +QGYL RP Sbjct: 904 HILKLLKCDLVQGYLFSRPVQAE 926 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 117/555 (21%), Positives = 214/555 (38%), Gaps = 23/555 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIFTL 253 + + + E A + + + L+ + + GY F Sbjct: 253 RKAEEALLLRNHAIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQEAVGRNCRFLQ 312 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMV 309 G + + + A+ C + + + +A + + + Sbjct: 313 GHDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPDPHGGEPRYFVGVQ 372 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 + QA D LT L N L++ S + IDN + Sbjct: 373 KDITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFK 432 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G IR + + L +++ + + +L G E +L+L+ + + +V + Sbjct: 433 RVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVVQRI 492 Query: 422 NSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + L + F + LL Q+ A Sbjct: 493 RNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSN-NFRFYA 551 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + ++ + ++ L N + AL+ L+L+ QP N + G + ++ G++ P Sbjct: 552 KEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPP 611 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 +F+PL L + V+E+ R +VNL L QK++ I Sbjct: 612 LQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIE 671 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + PQ + LEITE N E S+ + ++ G ++++DDFGTGY++ LKR Sbjct: 672 KTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKR 731 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L + +KID F+ DI T DA+I RSI LA + + V+AE VE+ Q A L + G Sbjct: 732 LPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCD 791 Query: 715 YLQGYLIGRPQPLAD 729 +QGYL+ RP+P + Sbjct: 792 EVQGYLLSRPRPFEE 806 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 97/565 (17%), Positives = 197/565 (34%), Gaps = 26/565 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF--TLSWLAALSVLLLLLCTPYENDF 238 M+ + R I A + A L+ + Y Sbjct: 134 MVRVWSLRNITERREADAYKAQLAAIVESSNDAIIVQDLNGIITSWNAGAEGLFGYRASE 193 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + G V + + + L + ++ ++ ++ + Sbjct: 194 VIGSSVEILIPPDL---REEEGDIMCLIKSGRRA--DHFETVRWGKGRKPIDVSVTISAM 248 Query: 299 ISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + ++ +VR + + R A D LT LPN L Sbjct: 249 KDRAGNIIGASKIVRDITQRKESQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYS 308 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + ID + ++ G + ++++ + + +++ + + ++ G E +++LS Sbjct: 309 IRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADTVSRVGGDEFVVLLSR 368 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ET L S+ L + + N + L Sbjct: 369 IETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNGKDASSLTRNADAAMYS 428 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + E ++ +++ L + +R AL + ++ QP G + Sbjct: 429 AKGQGRNR-YQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQPQIELATGRVIGVEA 487 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLM 580 ++ + G+++P F+P+ L +L +VN+ Sbjct: 488 LMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQWHEHQGFQGTIAVNVS 547 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + Q + ++R+ P+ + LE+TE ES + + L G ++AID Sbjct: 548 AVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVVQKMGILESHGIKLAID 607 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L++ D +KID FV+D+ + I+R+I + ++ L V+AE VE Sbjct: 608 DFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVE 667 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ 725 T+ Q L + QGYL RP Sbjct: 668 TEAQARFLQDIECTESQGYLYARPM 692 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 117/582 (20%), Positives = 219/582 (37%), Gaps = 29/582 (4%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR---AFTLSWLAALSVLLL--- 228 L++ L L R IL DI+ E+ A T+ V++ Sbjct: 290 GQLVWANLTAALMRDEGGRPEYFILVVEDISARKQSEEAQQLALTVFDSMLEGVIITDHH 349 Query: 229 --LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 +L I Y V + + + + + Sbjct: 350 RRILAVNAAFGEITRYPVEALLGRTPPLWRTAHQDAAFYRRIWRQLLASGRWEGELWHRK 409 Query: 284 GVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA- 339 T + L ++ + +++ + + + A DPLT LPN Sbjct: 410 RDGTPFPLWLSISCVRDEQGRPRQYVFVFNDISQLKDSQEQLERLAHYDPLTGLPNRHLA 469 Query: 340 -------LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 LE+A + + +D + ++ G + +I + L +++ + Sbjct: 470 LARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDT 529 Query: 393 LYQLPGSELLLVLSG--PETEGRLQHMVNILNSRQIHW-NNTGLDMGYGAAWGRFDGNQE 449 L +L G E L+V+ + + H + + + + +G + G+ Sbjct: 530 LARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGR 589 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L+ + A A E ++ +++ + ++R AL + +L+ Q Sbjct: 590 SASELIRNADAAMYLAKAQGSN-AYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQ 648 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P+ + G + ++ ++ P +F+PL + L VL + Sbjct: 649 PLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAW 708 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 +VNL P L+ ++ G++ + + + P + LE+TE AE ++ Sbjct: 709 LDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKT 768 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L + G +AIDDFGTGY++ LKR D +KID FV+D+ ++ DA IV +I + Sbjct: 769 LHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAM 828 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L +AE VET QQ A L +LG QGYL P P Sbjct: 829 VRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAE 870 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 112/557 (20%), Positives = 213/557 (38%), Gaps = 28/557 (5%) Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 + + + + +L I GY + Sbjct: 347 AMQHMVENLKIAATVFESAEGMVVTDEKKHILRVNQAFTDITGYQPKDVLGHHIKVIRSG 406 Query: 259 RY---PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL----ISFSVCLLYMVRI 311 R+ + L + T + EY ++ + + + + Sbjct: 407 RHNQSFYDELELQLKTQGSWQGEIFNKRKNGEEYLQWTMITAVISDHEDEIINYVITLID 466 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + + A D LT LPN + L + + L +D+ + + Sbjct: 467 ITQRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTL 526 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH-----MV 418 + G + + + LL ++ + + ++ G E +++L +++ + + Sbjct: 527 NDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLC 586 Query: 419 NILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + S+ + +N F G + + LL Q+ Sbjct: 587 RKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRN-THR 645 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIM 533 + + + + N IR AL + + LY QP + + G + ++ G + Sbjct: 646 FFNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHPKQGTI 705 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAG 591 +P +F+P+ + L VL+ + LA ++N+ Q Sbjct: 706 SPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQ 765 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 +++ +RY +P + LE+TE + E ++ + QL K+G ++DDFGTGY++ Sbjct: 766 QVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNY 825 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL D +KID FV+D++TN+ DA I R+I LAK+ +L+V+AE VETQ+Q+ L Sbjct: 826 LKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASY 885 Query: 712 GVQYLQGYLIGRPQPLA 728 G QGYL RP PL Sbjct: 886 GCLDFQGYLFSRPVPLE 902 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 120/625 (19%), Positives = 226/625 (36%), Gaps = 32/625 (5%) Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV-LIYNMLFYYLTRMI 190 TP G+ L ++ DA V+ L++ + L + L + R+ Sbjct: 36 TPEGVCTLFPLDHLAMAMGVEGYAGIALTDAAGNVLGPLAVLSRRPLGDSELAETMLRIF 95 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLV 244 + A++ + + L + + C FI Sbjct: 96 AARASAELERTKAEQARREQLHFLQVLIDSIPHPIFYKDADRRYIGCNAALESFIGRTRE 155 Query: 245 PVF----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL-- 298 + F I G ++ A + +Y+ + + + F V Sbjct: 156 EIIGKTVFDIGAEGRARICDAVDRKLLANG--GVESYDSTMIHTDGSIRDIIFSKTVFGN 213 Query: 299 -ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAG 349 ++ + + A D LT LPN L + G Sbjct: 214 TDGSIGGIVGTILDITERKRAEEAIQQLAYFDALTGLPNRTLLRDRVSQLLSQARREGGG 273 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 L +D + ++ G + ++ + ++E++ + +L E +++L G Sbjct: 274 FGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRESDTVARLGSDEFVVILPGVG 333 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E + +V + +R I + + + + LL ++ Sbjct: 334 HEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTDGSSADILLKNADMAMHKAK 393 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEIL 523 ++ + +++ L ++R AL++ + LL+ QP I + G + +L Sbjct: 394 EFGGD-GYQFYSSELNHRAMERLTLETSLRRALERREFLLHYQPLLGIGSGRIVGVEALL 452 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPL 582 + G+++P +F+PL + L VL S + L SVN+ Sbjct: 453 RWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSAR 512 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + + + P+ + LE+TE +E++ + +L + G +AIDDF Sbjct: 513 QFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDF 572 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK D +KID FVK++ + +A I +I LA +L VVAE VET Sbjct: 573 GTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETA 632 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 +Q A L L +QGY I RP P Sbjct: 633 EQLAFLAALRCDVVQGYHIARPLPP 657 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 108/568 (19%), Positives = 188/568 (33%), Gaps = 29/568 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC---TPYENDFIAGYLVPV 246 + GKE L L + + + Sbjct: 934 TAKLSQTIAELHQVEEILRGKETHYRQALNLTNTGSWEFDLASEKVFWSEQVEIIWGMKP 993 Query: 247 FFIIFTLGVGKLR-YPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 K +P W + N + + + + I Sbjct: 994 GTFRGEFDQVKAGIHPQDFDLWQQNVQACIEEGKEHNLEFRVVHPDGSIHWVQAIGNAEY 1053 Query: 300 SFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 L ++ + R + A D LT LPN L+ + Sbjct: 1054 DSQGHPIRLRGLIMDVTERKTSQERLNYMAHHDHLTDLPNRLLLKARLDQSIQQATRKRT 1113 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G ++ + + L +++ ++ + ++ G E + VL Sbjct: 1114 KLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAVLEDI 1173 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E +V L + M F + LL ++ Sbjct: 1174 EDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSLFPDDGMDTAILLRNADSAMYRA 1233 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEI 522 E ++ + VL N +R AL + + L QP + G + + Sbjct: 1234 KEEGRN-TYCFYAEEMTSAAFEYVLFENALRGALKRNEFYLVYQPQIDLSSHRWVGMEVL 1292 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMP 581 L + GI++P +F+P+ Q L VL T +VN+ Sbjct: 1293 LRWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYRACCQAKTWLDQGIDFGHIAVNVAA 1352 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + Q N + + + LE+TE E + +E L G +AIDD Sbjct: 1353 PQIQQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDD 1412 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL + +KID FV+DI +T D I ++ L KA +L ++AE VE Sbjct: 1413 FGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDMAISEAVIALGKALNLRIIAEGVEQ 1472 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + Q L + G QGYL +P P + Sbjct: 1473 EIQATFLREKGCHEAQGYLYSKPLPPEE 1500 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 112/568 (19%), Positives = 205/568 (36%), Gaps = 33/568 (5%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS--WLAALSVLLLLLCTPYENDFIAGYLV 244 R I A L R +E T + + ++ + + I Sbjct: 465 FRDISEARKADELMRIAAIAFETQEAMLVTDAKSQILRVNRAFTEVTGYSAAEAIGQT-- 522 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--- 301 + +L ++ L + Y ++ + Sbjct: 523 ----PALLKSGYHEDSFYKDLWTSLKENGLWRGEIWNRRKNGEIYPEWLTISAVRGQHGE 578 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + + + AL DPLT LPN R L + Q + Sbjct: 579 ITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRLLNERLSKALTSSGRQRRHAALL 638 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP----- 408 + +DN + ++ G + +R + L ++ N+ + +L G E +++L Sbjct: 639 FIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGDEFVILLEELSPNIH 698 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + +++H+ + + + F ET++ LL ++ Sbjct: 699 DATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETIESLLKSADMAMYKA 758 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEIL 523 A + + + + L +R A + +LY QP + G + ++ Sbjct: 759 KAAGKNRLF-FFDPAMQTEVEARAALERDLRQAQREKQFVLYLQPQVDQSGHVSGAEALI 817 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMP 581 G++ P +F + + L VLE K L D ++N+ Sbjct: 818 RWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNPDTAHLTLAINVSA 877 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH-KFGFRIAID 640 L + + R + LEITE + + ++ ++ L + G +++D Sbjct: 878 LQFRNPDFVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERMQVLKNQLGVGLSLD 937 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK+L D IKID FVKDI N DA I ++ L ++ SL+V+AE VE Sbjct: 938 DFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALGRSFSLNVIAEGVE 997 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T +Q+ L G QGYL GRP P+ Sbjct: 998 TIEQRDALIARGCLTFQGYLFGRPGPID 1025 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 8/157 (5%), Positives = 37/157 (23%), Gaps = 6/157 (3%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 L +L ++ R++ + + + + + +++ ++ + Sbjct: 327 LSTLLILSMLAVAYLIRSKRLVGAALRERASLLDSLGEGVYGIDQNGQCTFINPKALEM- 385 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + D + G F + + + F Sbjct: 386 ---LGWTADEVIGSDQHARFHHHRPDGSIYPSADCPVYQTLRDGQRRQGEEWFFNKDGRG 442 Query: 289 YSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + + + + R + + Sbjct: 443 FPVQYSVTPISRQEDKEGAVVTFRDISEARKADELMR 479 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 111/585 (18%), Positives = 206/585 (35%), Gaps = 32/585 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP- 233 + L YL + + R+D + ++ L L Sbjct: 301 SELQSARRSAYLLSLAIENDLNDRQIRQDRQAIEEAGLYRQAILDSMVDGLVTLDLNGRI 360 Query: 234 --YENDFIAGYLVPVFFIIFTLGVGKLRYPF-------LNLTWAVSTLCLLNYNQNFLQG 284 + N L L+L V + + N Sbjct: 361 HTFNNAACRMMGRDPEAPRPQTLSELLGTQLPLNVQGHLDLLSTVDGIEGASAEVNGRHA 420 Query: 285 VETEYSLAFILAVLIS-FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 ++ + + + +R + A DPLT LPN R L Sbjct: 421 NGAIRPISVSASRIPHTEHDTFVVTLRDITQQRQDEEEIRRLAFYDPLTGLPNRRLLMDR 480 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 Q + L +D+ + ++ G + ++ + L ++E + + + Sbjct: 481 VRQAMVNSARLGQHGALMFLDLDHFKLLNDTLGHDVGDELLQQVAYRLRNCVREGDSVAR 540 Query: 396 LPGSELLLVLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGN 447 L G E +++L G + + + + + + G + F + Sbjct: 541 LGGDEFVVLLEGLSDNRTDAANQAEVVAHKILDALALPYSLRGHGYNSTPSIGIVVFMED 600 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 ET+ LL + Q+ A A + ++ T L IR L + + +L+ Sbjct: 601 HETMDDLLKKADVAMYQAKAAGRNTA-RFFDPVMQAAVTTHAELAKEIRLGLQRHEFVLH 659 Query: 508 AQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + G + ++ G+++P F+PL + + V+ES + L Sbjct: 660 YQVQIDSQGRCTGAEALVRWNHRVRGLVSPAHFIPLAEETGMILPLGEWVMESACQQLVE 719 Query: 566 HPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ L Q + +R + LE+TE + E Sbjct: 720 WSRNPMTAHWTLAVNVSASQLAQPEFVASVREALQRSGAPAGQLKLELTESMLVDDVEDI 779 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + + + G ++DDFGTGY++ LKRL +KID FV+D++T+ DA+I R++ Sbjct: 780 IVKMMAIKELGVSFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTV 839 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L + L+V+AE VET +Q+ L + QGY GRP P Sbjct: 840 VALGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYFGRPAPAD 884 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 120/597 (20%), Positives = 237/597 (39%), Gaps = 31/597 (5%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 +++ + L F+ L LF L ++ A + + + K Sbjct: 333 ESLRALQSLGHQFSVALGRARLFDSLESLVEQRTSALKAEMAEKERAQEQLKLRNRAVDA 392 Query: 221 AALSVLLL--------LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAV 269 + ++++ ++ + I+GY + +F LG + N+ A+ Sbjct: 393 SVNAIIIADKSEPDNPIVYANPAFERISGYNLEDVTGRNFLFLLGNETSQLGVANIKRAL 452 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + T + +A + + ++ S + + Sbjct: 453 KSNTEGYALLKNYRKDGTLFWSELKVAPVTDAKGDVTHFVAILNDVTESIQYQAQLEYKT 512 Query: 327 LTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN L +Q G + +DN ++++ G + Sbjct: 513 KYDNLTGLPNRNLLNDRIQQAIAYAARRNKGFALAVFDLDNFKYINDSMGHETGDQLLTE 572 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDM 435 + +L ++E + L +L G E ++++ E + L M+N + S+ + + + Sbjct: 573 VAESLRSCLREGDTLARLGGDEFVILMHKEECDRPLGLMLNRIQQLVSQPRRLKDKEILV 632 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 +F + E LL ++ + S + ++ K+V + + Sbjct: 633 TPSIGVCQFPEDGEDASTLLKNADTAMYKAKERGRNR-ICSYTQEMNESIQKRVQMEQDL 691 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R ++ G+L LY QP + G + ++ K D ++ P +F+P+ + L D Sbjct: 692 RRGIENGELELYYQPQLDPHGGGAVGLEALVRWRKGDR-MVPPLEFIPIAEETGLITEVD 750 Query: 553 LQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + L K+ SVNL P + ++ + +I P + +E+ Sbjct: 751 AWVLRAACLQLKMWRDQKQQMVPVSVNLSPRQFQDAYCVELVRKVLQESNIEPGCLKIEV 810 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE NAE ++ + QL G ++++DDFGTGY++ LK D +KID FV+++ Sbjct: 811 TESMVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVT 870 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +A I+R+I L K + +VAE VET +Q + L + G +QGY P P+A Sbjct: 871 NDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVA 927 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 101/591 (17%), Positives = 225/591 (38%), Gaps = 37/591 (6%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + LL+ ++ + +L R + R+I A + A+ + Sbjct: 356 IFLLLATIFSLGFSLLFSGWLNRKFTE-------YHREIESKQRALSLASQVFDNASEGI 408 Query: 226 LLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 ++ LL I GY F + ++ ++T Sbjct: 409 MVTGSDNRLLTVNDAFVDITGYSADEVVGKNPKFLQSGRHDETFYRSMWQMINTSGYWRG 468 Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + + + + + + + + + + + DPLT L Sbjct: 469 EIWNRRKNGEVFPQWLSIQAVTDSAGMARNYIASITDLTERKQVEEKLRYLSDFDPLTNL 528 Query: 335 PNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 PN R L +Q + + + +D+ + ++ G ++ + + + Sbjct: 529 PNRRLLGYRVDQTLSLSRRQPDQQFALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITE 588 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWG 442 L++E + + +L G E ++++ + ++ + ++ + N++ L + Sbjct: 589 LVREGDTVSRLGGDEFMILMPELHKLEQAANLAERILHNIAQPLE-NDSHLMITPSVGIA 647 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + ++ LL + ++ + ++++ + ++R A++ Sbjct: 648 VYPNDGDSFDKLLRNADAAVHFAKRQGRN-NYQFYTAEMNQRASERLQVEISLRKAVENQ 706 Query: 503 DLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L+ QP N G + ++ + G++ P++F+PL + L + VL Sbjct: 707 EFELFYQPQLNLRDGSLAGVEALIRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEA 766 Query: 560 LKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + A + SVN+ + + +SP+++++EITE Sbjct: 767 CRQGAEWAAKSTEPFTMSVNVSVRQFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQ 825 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + E ++ + +L + G ++++DDFGTGY++ LKR D +KID F+ D+ N DA Sbjct: 826 DEEKTLTLLHELKELGVQLSLDDFGTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAA 885 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +I D+A L VAE +E +Q L +G QGY +P P D Sbjct: 886 ITSAIIDVASHFGLVTVAEGIEKPEQAEFLASVGCIEGQGYYYEKPIPAND 936 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 122/586 (20%), Positives = 225/586 (38%), Gaps = 35/586 (5%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWR---RDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 L L ++ A +L R + + T+ + V++ + Sbjct: 135 TSLPLTTMLQPVLAHLAKAIVLCRNNDVHTRGLIDQRDLLETVFESSYSGVMITDAKGNI 194 Query: 230 LCTPYENDFIAGYLVPVFFII--FTLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVE 286 + I GY L G+ + F W + + Sbjct: 195 VEVNPAFTRITGYQSEEVQGRNPHLLASGRHDHTFYREMWDDILANGHWEGEIWDRRKNG 254 Query: 287 TEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y + + S + + + + + H A DPLT LPN R L + Sbjct: 255 EVYPSWMNINPVRDISGNLLYYVGIFSDVTKRKEAEAQIHQLAFYDPLTELPNRRLLNER 314 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +Q + L +DN + ++ G + + + + L ++ + + + Sbjct: 315 LQQAFSVGARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVAR 374 Query: 396 LPGSELLLVLSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGN 447 L G E ++VL E + + + S+ N F G+ Sbjct: 375 LGGDEFVVVLESLSSVPDEAATQADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGH 434 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 Q++L+ +L Q+ A+ + ++ + L +R +++ L LY Sbjct: 435 QQSLEEVLKFADTAMYQAKTAGRN-AIRFYDPVMQASIEARAELEEELRQVVERNQLRLY 493 Query: 508 AQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + G + +L + G+++P +F+P+ + L VL++ L Sbjct: 494 YQVQMDSSNRPLGAEVLLRWQHPERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKV 553 Query: 566 HPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 D +VN+ + ++ R + P + LE+TE N E + Sbjct: 554 WQSDPLTCDLTLAVNVSAKQFRSMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVEDT 613 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +L G ++DDFGTGY++ + LKRL D IKID FV+DI +++ DA IV++I Sbjct: 614 IAKMRELKLLGVSFSMDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTI 673 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +++ L+V+AE VET+ Q+ L G QGYL GRP PLA+ Sbjct: 674 IAMSEVLGLNVIAEGVETEAQREFLDLRGCHAFQGYLFGRPAPLAE 719 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 110/570 (19%), Positives = 216/570 (37%), Gaps = 25/570 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL-SVLLLLLCTPYENDFIAG 241 R I ++ + + + + + + + + G Sbjct: 472 LTVYFRDITERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYG 531 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL---AFILAVL 298 + + F A+ + + ++ ++ ++ Sbjct: 532 WTSEEVMGREVEMLYDNVAVFDEANRALLSSGEWRGELAQRRRDQSMLNVEAHWTLVRND 591 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + + AL D LT LPN R L + Sbjct: 592 DGEPQAIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQRMG 651 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL----- 405 + + +DN + ++ G M +R + L ++E++ + +L G E +++L Sbjct: 652 ALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMGDFG 711 Query: 406 -SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 E ++ + + S + + + + F+ +T LL + Sbjct: 712 EDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRADLA 771 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-GEGYD 520 Q+ A A+ + + + +L + + + ++ + +L+ Q + G + Sbjct: 772 MYQAKASGRN-AMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVDSRGIIGAE 830 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVN 578 ++ G++ P +F+P + L VLE+ LA+ + SVN Sbjct: 831 ALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLSVN 890 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L Q + ++I + R +PQ + LE+TE + + ++ + L G A Sbjct: 891 VSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFA 950 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFG GY++ LKRL D +KID FV+D++T+ DA IVR+I LAK+ L+V+AE Sbjct: 951 LDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEG 1010 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q+ L G QGYL RP PL Sbjct: 1011 VETGAQKDFLASHGCTAYQGYLFSRPLPLE 1040 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 114/551 (20%), Positives = 210/551 (38%), Gaps = 24/551 (4%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVG 256 D + +K A + AA +L+ + I GY + + Sbjct: 515 SDRVQADANQKLASKVFENAAEGILITGADYRIIAVNQAFTRITGYPPELVIGRVSRIFR 574 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYH 313 + + ++ + Y ++ + + + Sbjct: 575 DNTSWSVAMLDGLARHGHWQGEMLDRRRSHEWYPAELSISAVRDDAGAITNYVGVFADIT 634 Query: 314 RSEWLNRRWHLQALTDPLTLLPNF----RALEQAPEQ----EAGKSFCCLRIDNLEFMSR 365 + R A DPLT LPN LE +Q + L +D + ++ Sbjct: 635 VRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRFKLIND 694 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 +G +R L ++ ++ +L G E L++S ++ L + + + Sbjct: 695 SFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLVSHFASQATLSTLAEDILAVL 754 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + L + + + + LL ++ ++ Sbjct: 755 AQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGKN-TYQFFAAEMN 813 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFL 539 Q +++ L +R AL++G+ L+ QPI E + +L + G+++P +F+ Sbjct: 814 AQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFI 873 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L V+ + LA C R ++NL Q+ + ++ Sbjct: 874 PLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQVAGALA 933 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 I+ + LE+TE N ++ + +L G R++IDDFGTGY++ LKR D Sbjct: 934 EAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPLD 993 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F++ + + +A I +I +A+ S SVVAE VET+ Q A L G Q LQG Sbjct: 994 TLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQG 1053 Query: 719 YLIGRPQPLAD 729 YL RP P A+ Sbjct: 1054 YLFSRPLPAAE 1064 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/262 (8%), Positives = 52/262 (19%), Gaps = 5/262 (1%) Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 + + F L ++ + + ++ Sbjct: 147 GALALALVLCVPAAFAGVEYSRRRYLELLLIALVTLALWVAVFVAGHVSLVPIHLLLYPC 206 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 L W IG + L+ L +F +V L+L + + Sbjct: 207 LLWAACRAGIGGATLLGLLILVLATFLDGPSFQPVPLPANGIVLNLALVLSAQLVATQSE 266 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 R I + + + S ++ + I Sbjct: 267 AAARRIRQLQDSLARFEAWLRNSPNVMSLKDLEGRYLLVNRAYSRALGKAPAELIGKKSA 326 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + L+ + F L Sbjct: 327 DFLPPEEARATAEQDRQVLSALESRQ----YEQTLTLDGLPGDFLVTKFPLFDADGLPAG 382 Query: 305 LLYMVRIYHRSEWLNRRWHLQA 326 + + +++ R+ +A Sbjct: 383 IGCIATDITQNKR-ERQAKQEA 403 Score = 42.3 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 36/129 (27%), Gaps = 9/129 (6%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVF--FIIFTLG 254 +R+ E R L + + + +L L + + GY I T+ Sbjct: 394 KRERQAKQEAENRYHALIEQSLVGIYILQDECLAYVNDKLAEMLGYPGEELQGERIETVL 453 Query: 255 VGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFILAVLISFS-VCLLYMVRI 311 + R + +++++ ++ + + ++ +V Sbjct: 454 AHEERQRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIHSRLFEYRGRSAIIGVVVD 513 Query: 312 YHRSEWLNR 320 + Sbjct: 514 ISDRVQADA 522 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 101/553 (18%), Positives = 203/553 (36%), Gaps = 28/553 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFF---IIFTLG 254 + + + + S+++ L + GY Sbjct: 387 EQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVLGQNPRILKS 446 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRI 311 + F + ++ + + + ++ Y + + + + + Sbjct: 447 GKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADGKITNYVAIKED 506 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFM 363 + A D LT LPN R L+ A + L +DN + + Sbjct: 507 ITEKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNI 566 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR---LQHMVNI 420 + G + + I + + ++E + + +L G E +++ + ++ Sbjct: 567 NDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAMHIATTLIQE 626 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 ++ + + L + + + + LL + Sbjct: 627 ISKASV-VEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSRN-GFHFVTPE 684 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + ++ + L N +R AL + +L LY QP N + G + +L + G+++P + Sbjct: 685 MQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAE 744 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ VL + ++ D +VNL + QKN+ I + Sbjct: 745 FIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDI 804 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + + LE+TE + ES + + H+ G R++IDDFGTGY++ LK+ + Sbjct: 805 LAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFK 864 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID F++DI + D IV +I D+A L +AE VET +Q A L G + Sbjct: 865 VYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEV 924 Query: 717 QGYLIGRPQPLAD 729 QGY +P P + Sbjct: 925 QGYYFSKPLPSVE 937 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/332 (7%), Positives = 85/332 (25%), Gaps = 22/332 (6%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMF-CTNL 76 + V + AI+ S + + + L R + + Sbjct: 69 LLIAVGFFGTAFLDGYHAIVTSLFFAEYFPSIPSSLIPWSWIASRLFLSIFLFWSYIHFR 128 Query: 77 WNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI 136 + + + + + + L + + + + L + Sbjct: 129 YMHSTTINERHLYTFASLSTLTTFLFFAFVPLSNAYNTEFIFHRMAEWVPGLFFSLALCG 188 Query: 137 KCS----------MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 +L S + F ++ +F + + + Y ++ L Sbjct: 189 YLVKGNWKKDIFEYWLTLSLIVSVISQIVFMSSSEVLFDIEFDAAHLLKKISYILVLIGL 248 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 + I ++ R ++ K KR ++ L + + + + Sbjct: 249 LKSIYKLVLYGVIQRAELIKQTYKLKRYQRIAGLGSYLLNFKTGIWTSSEILDELFGIDQ 308 Query: 247 FFIIFTLGVGKLRYPFLNLT-------WAVSTLCLLNYNQNFLQG-VETEYSLAFILAVL 298 + T G + +P + ++ + ++ ++ L + + Sbjct: 309 SYNHSTEGWTLIVHPDDRIKMDDYLKNEVLAKGKPFDKEYRIVRQTDQSIRWLHGLGKLE 368 Query: 299 ISFSVC---LLYMVRIYHRSEWLNRRWHLQAL 327 ++ V+ + + +L Sbjct: 369 FDNDGLPVKMVGTVQDITEQKRASDSLLKLSL 400 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 108/609 (17%), Positives = 207/609 (33%), Gaps = 32/609 (5%) Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 +D + + S+ A L +LFY + R++ RR + Sbjct: 115 IYDAGTSVGKILVSRSLAPLLWKTSSVAVAALAAGLLFYTVLRILPLR-----AVRRAYS 169 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 EK+ +L V L + ++ +V V L Sbjct: 170 SLEESEKKYRSLYESMKEGVALHRINYDEYGVPVSFTIVDVNPSCQLLLGLSSEELIGKD 229 Query: 266 TWA--VSTLCLLNYNQNFLQGVETEYSLAFI---------LAVLISFSVCLLYMVRIYHR 314 + +S F+ +AV + +++ + Sbjct: 230 GSELFGGAVAGYFPEILRAASTGEAFSFDFVQQADKQRIHVAVFFPETGYFAFLMEDVTQ 289 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRH 366 + + A D LT LPN L EQ + L +D + ++ Sbjct: 290 RKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDRFKVINDT 349 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G + + L ++ ++ L ++ G E +++ + + + + L Sbjct: 350 MGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQHLIDSIT 409 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + F + LL + ++ Sbjct: 410 SVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKE-GGGKGYHFYSPEMNL 468 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 + ++ + +R AL++ + L QPI + G + +L + G++ PD F+ Sbjct: 469 KAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDMFIQ 528 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + VL + + + R SVN+ Q N + + + Sbjct: 529 VAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCSIIRE 588 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P + LE+TE + E++ + QL + I IDDFG GY++ L++ D Sbjct: 589 TGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPIDR 648 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 IKID F++D+ ++ D IV +I +A L VVAE VET +Q L + G +QG+ Sbjct: 649 IKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQGF 708 Query: 720 LIGRPQPLA 728 RP Sbjct: 709 YFHRPLSEE 717 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 114/564 (20%), Positives = 207/564 (36%), Gaps = 23/564 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R + +R + G + A+ + + + Sbjct: 259 RSAEQLREQLLFIQRIASRIPGFIYEYRMHNDGASSVPYISDAVREFMGVNPEDVMRDHG 318 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL- 306 ++ ++ + + ++ L + ++ Sbjct: 319 LLMRSVVPDDAAHVRRSAVASLRNLAPWQCEYRVSMPDGSVRWHITNAIPHREPDGSVVS 378 Query: 307 -YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + A D LT LPN R L + + + + Sbjct: 379 HGFTMDITDRKRAEQEIERLAFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALLFIDL 438 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEG 412 DN + ++ G M H + + LL ++E + + + G E +++L E Sbjct: 439 DNFKDLNDTLGHDMGDHLLSQVAARLLACVRETDTVARFGGDEFVVMLETLRPELTEAAS 498 Query: 413 RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + L + + F + ++ LL + Q+ Sbjct: 499 QAEIVAEKLLASLNQPFALGGQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQAKGAG 558 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLK 527 + + + L +R L +G+L +Y QP+ + G + ++ Sbjct: 559 RNTQ-RFFDPDMQAAVNARSNLEADLRQGLARGELCVYYQPVVDHRARLLGVEALVRWRH 617 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLL 585 G+++P F+PL Q L QVL++ L + SVN+ Sbjct: 618 PVRGMISPADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFR 677 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q +++ + P+ + LE+TE + E ++ +EQL + G A+DDFGTG Sbjct: 678 QPGFVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTG 737 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL D +KID FV+D++T+ DA IVR+I LA++ L VVAE VET Q Sbjct: 738 YSSLSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQL 797 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 A L G + QGYL GRP P+ D Sbjct: 798 AFLRLHGCEGFQGYLFGRPGPVED 821 Score = 45.4 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 12/194 (6%), Positives = 34/194 (17%), Gaps = 28/194 (14%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 +A + R + + + S + L Sbjct: 99 LSARRVAGCSIMVTVRDVSEVETLRAALAACERSLEETRRELREQSDVFNTMEGLARTGH 158 Query: 233 PYENDFIAGYLV---PVFFIIFTLGVGKLRYPFLNLT-----------WAVSTLCLLNYN 278 + ++ P I + P ++ A + + Sbjct: 159 WRRIEDPGETVLLWSPGLCDIAGFDRQEWVSPERAVSGILPEDRHVFEKAREKVAGADIE 218 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + + + S + +V+ + Q Sbjct: 219 YRWRRPDGEVRWMRSRVRRARSGDGMRVEMGVVQDVTEEHRSAEQLREQ----------- 267 Query: 337 FRALEQAPEQEAGK 350 Q Sbjct: 268 -LLFIQRIASRIPG 280 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 97/547 (17%), Positives = 197/547 (36%), Gaps = 20/547 (3%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + ++ E + A ++ + + + + Sbjct: 526 QLRQAAIVFESTREGIVITDAERNIIKVNRALIDLFGYPENELLGQRPRIFHSGKHDGHF 585 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWL 318 + + A+ + + + + + + + + + Sbjct: 586 YQQMLQALDEHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYISIYTDISQLKDS 645 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLM 370 R AL DPLT LPN L Q + + L +D+ + ++ +G Sbjct: 646 EARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHH 705 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIH 427 + + L ++E++ + +L G E ++L + + + + + Sbjct: 706 FGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFL 765 Query: 428 WNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 +N + +G + + T + L+ Q ++ E + + Sbjct: 766 LSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRD-GYRYFSEELFLKAK 824 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++ L + A+ + ++ QP + + G + +L + G++ P +F+ + Sbjct: 825 ARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAE 884 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L VL + +VNL PL L ++ I + Sbjct: 885 ETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGF 944 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + LE+TE E ++ ++ L + G RIAIDDFGTGY++ LK+ D++KI Sbjct: 945 PAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKI 1004 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+DI D I +I + + L+V+AE VET+ Q L + G Y QGYL Sbjct: 1005 DKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYS 1064 Query: 723 RPQPLAD 729 P P + Sbjct: 1065 MPLPAEE 1071 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/229 (8%), Positives = 50/229 (21%), Gaps = 20/229 (8%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 ++ ++ + + S + + D++ V L + T + Sbjct: 3 SATAQIPLRTATRIMLFYTVLSVAWFYFSGYSLSPSATKGAPPFDSLTFWVSLTTFITGI 62 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 + ++V + K++ L L + + Sbjct: 63 TVGV------FFLLVWRQHYMQHRQALSRRVAEKDRLLHHFFDLPLLGMAITTNANGSWL 116 Query: 237 DFIAGYLVPVFFIIFTLGV-------GKLRYPFLNLTW---AVSTLCLLNYNQNFLQGVE 286 F L P+ W + F++ Sbjct: 117 RFNDHLSTLFNLSRDELAELNLLALTHPDDRPYDRQEWMRMQDGESQGYRREKRFVRPDG 176 Query: 287 TEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQAL-TDPL 331 + + C++ ++ + R Q D L Sbjct: 177 SMLFALVDTRCIRHPDGSIDCMINVIEDISARKNSELRLIRQNNLYDML 225 Score = 41.9 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 10/166 (6%), Positives = 31/166 (18%), Gaps = 10/166 (6%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK-RAFT---LSWLAAL 223 ++ + +++ + A I + SW Sbjct: 369 EVRATLNDMVMDVTYALDMLLQAKERANALIALQNAAEVIDASPTILFRWQPNSSWKMEY 428 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + +DFI G L + ++ + Sbjct: 429 VSSNVQRWGYQADDFINGKLTMSDLLHPEDLQRVWAEVIHHI---ETRHKEYILECRVRT 485 Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQA 326 + + ++ + + + A Sbjct: 486 AAGEYLWVENHVTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAA 531 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 107/575 (18%), Positives = 200/575 (34%), Gaps = 32/575 (5%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEN 236 L Y + + + ++R A L +L+ ++ + Sbjct: 824 LEYAGRKARLVLAHDITERLKAEKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAW 883 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL-----NYNQNFLQGVETEYSL 291 ++GY + I + + L + Sbjct: 884 TELSGYHLDELSTIADWTEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIW 943 Query: 292 AFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA 348 F A L ++ M + + L D LT LPN L EQ Sbjct: 944 DFSSAPLGKLADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAI 1003 Query: 349 G---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +D + ++ G ++ +++I L ++ + + + G Sbjct: 1004 KRKQQQPNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGD 1063 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +++L M + ++T L+ Sbjct: 1064 EFVILLEDLTIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVR 1123 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK-- 514 +S + ++ Q T+ + L +R AL++ + ++Y QPI + Sbjct: 1124 NADIAMYRSKEAGRAR-YTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMN 1182 Query: 515 -EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-- 571 G++ ++ + + G+++P F+P+ + L VL + + Sbjct: 1183 RNLLGFEALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGA 1242 Query: 572 -GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R SVNL L Q N+ RI + + + + LEITE +N E + Q+ Sbjct: 1243 ENLRVSVNLSGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQM 1302 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 +++IDDFGTGY++ L L D +KID FV + + IV +I LA Sbjct: 1303 KAKKIQVSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHL 1362 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + VVAE VET+Q L +LG ++ QGY +P Sbjct: 1363 QMDVVAEGVETEQHLRQLQQLGCEFGQGYFFSKPL 1397 Score = 59.6 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 21/181 (11%), Positives = 50/181 (27%), Gaps = 13/181 (7%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 ++G+ + +TV L L + +LI +L L R I F + ++ A E R Sbjct: 255 WYGEPENFWTVGRLFWLMSGLLITTILLMSLWRYISLRPFYR--LQQIEAALRASESRYR 312 Query: 216 TLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP--FLNLTW 267 + + + + V F + P N+ Sbjct: 313 GIVEDQSEFICRYRPGGTLTFVNQAYCRYFQKTPAAVLDNTFWDLIYSEDQPQVAQNIAS 372 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHL 324 ++ + + V++ ++ + R + + + Sbjct: 373 LTPENPMITHEHRVRLSSGEIRWNQWTNRVIMDEKRNIIEFQAVGRDITQLKQVEAALRQ 432 Query: 325 Q 325 Sbjct: 433 L 433 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 124/716 (17%), Positives = 231/716 (32%), Gaps = 39/716 (5%) Query: 45 AWMPLCVMLSILFIFGWRGVVPV------LCGMFCTNLWNFHLSFLQTAVMLGSQTFVVL 98 W+ + S L G + + T + T + FV+ Sbjct: 452 RWLWTVLGGSALVFAGSAYFLLRLRRSNRMLEALNTQVQRSQNQLQATFDAIPDPLFVLG 511 Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 + + + + L C L + F Sbjct: 512 LDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPEAASICLSALREANEKGTSTGKQFEL 571 Query: 159 DADAIFTVVDLLSLFTAVLIYN-MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 +L +V F L+R I A+ R +E T Sbjct: 572 QLAHGRAWFELSVARKSVGQRQEPRFIVLSRDITERKQAEEALRIAATAFESQEGMTVTD 631 Query: 218 SWLAALSV--LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + A L + + ++ + + + + ++ Sbjct: 632 AQGAVLRINRAFTEITGYSADEVVGH------NPRLLQSGRHDKAFYAAMWESIRRTGSW 685 Query: 276 NYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + Y + + + R + A D T Sbjct: 686 QGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMDITRRKAAEDEIRNLAFFDLQT 745 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN R L + + +DN + ++ G ++ + + L Sbjct: 746 GLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLA 805 Query: 385 PLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMVNILNS---RQIHWNNTGLDMG 436 + E + +L G E +++L + + + + + + + Sbjct: 806 SCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQST 865 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F QET + LL + Q+ A L + + T + L +R Sbjct: 866 ASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRN-TLRFFDPEMQAVVTSRAALEAGLR 924 Query: 497 TALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A+ + LLY Q + + G + +L + G++ P +F+ L L Sbjct: 925 RAVTSDEFLLYYQAQVDGQGHLTGCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRW 984 Query: 555 VLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL++ LA + +VN+ Q + +++ + +PQ + LE+T Sbjct: 985 VLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELT 1044 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + E + + L + G ++DDFGTGY++ LKRL D +KID FV++I+ Sbjct: 1045 ESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILI 1104 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + DA I R + L + L+V+AE VE + Q+ L +LG QGYL RP PL Sbjct: 1105 DPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLD 1160 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 105/571 (18%), Positives = 205/571 (35%), Gaps = 25/571 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 R I ++ R + + ++ + Sbjct: 348 GQPADLLSLRDIAERKASEQQLRLLKESLEASFNGVVIVDAIEPDMPVIY---VNPAFER 404 Query: 239 IAGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 I GY G + + +S ++ + + + Sbjct: 405 ITGYSEAEMLGRNCRILQGNERDSLQIEEIHRGLSQAENVHVVIRNFRKDGQPFWNDLYI 464 Query: 296 AVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE----- 347 + + + + + A D LT LPN LE Q Sbjct: 465 SPIFNAQGNVTHFIGVQNDITEQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKMAL 524 Query: 348 ---AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +D + ++ G + + + + ++ + + ++ G E +++ Sbjct: 525 RQKHSLAILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIIL 584 Query: 405 LSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + E + + + L + R H L + DG+ E L+ Q Sbjct: 585 LVDLKLENDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLA 644 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 ++ ++ + ++V L N ++ A++ LY QP + + G Sbjct: 645 MYKAKQEGRN-NYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQVIG 703 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSV 577 + +L G ++P F+P+ VLE+ + L P +V Sbjct: 704 LEALLRWQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPSVAV 763 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ + + N + ++Y + + + +EITE F N E ++ +++L + G I Sbjct: 764 NISTVQFRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNI 823 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFGTG+++ LK L D +KID FV++I T++ DA I + I +A L+VVAE Sbjct: 824 SIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAE 883 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET+QQ L + QGY +P P Sbjct: 884 GVETEQQFKFLQQSNCDQYQGYYFAKPMPFE 914 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 99/445 (22%), Positives = 187/445 (42%), Gaps = 16/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + L+ M +R A D LT LPN L+ + Sbjct: 125 GKPLYLIGMFVDITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVA 184 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G + ++++ + +++ + + + G E +++LS E+ Sbjct: 185 LLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLESA 244 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + L + F + E + LL + + Sbjct: 245 FDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKKN 304 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + + ++ Q ++ + +R AL + +LLL+ QPI N + +G++ +L Sbjct: 305 GRNNC-EFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRW 363 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 G++ P KF+ L + + ++ + R ++NL + Sbjct: 364 QHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQF 423 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 QK + I+R+ ++ + LEITE + + E ++ + QL + G I+IDDFGT Sbjct: 424 RQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFGT 483 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+N LKR Q + +KID FV+DI + D I+ +I +A A L V+AE VE +QQ Sbjct: 484 GYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQ 543 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 A L G QG+ +P P + Sbjct: 544 LAYLALHGCTRFQGFYFSKPLPAIE 568 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 110/708 (15%), Positives = 236/708 (33%), Gaps = 37/708 (5%) Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 I G + + + L + L L A++ + + + + R L Sbjct: 34 IGGAFFTLSGVVTLATLLLPSRPLHVLGVALVATAAIGIGIAVWLLPWGSWSRRAPLTLV 93 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS--LFTA 175 + ++ + +F L + +V ++ + T Sbjct: 94 PVAFTLIAIHNYFARDEPARFGLFFIVTFTWIGLACPRWTSLPFVPLMIVAYVTPLVVTG 153 Query: 176 VLIYNMLFYYL------TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-- 227 I L + + + + R E R +L A+ V + Sbjct: 154 TSIATALSAAVCTAPVCVLVAEAIAWVGARLRVAQRSLRESEVRFRSLVQHASDVVAVLG 213 Query: 228 ----LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN---YNQN 280 +P + + + P L Sbjct: 214 PDGTARYVSPAIQHVLGYRPEDLIGTSVFDRIHPDDLPHARAQLTEIVLGRGAMPPTQFR 273 Query: 281 FLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + + + L+ ++ R + + QA DPLT LPN Sbjct: 274 YRRADGSWVYVEATATNLLDNPAVGGIVINARDISERKRFEKELVHQAYHDPLTGLPNRV 333 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L++ + + + +DN + ++ G + + + LL ++ Sbjct: 334 FLQRRLADSLAQAARERTRVALLFIDLDNFKLINDSLGHDAGDRVLSELGKRLLGCIRCG 393 Query: 391 EKLYQLPGSELLLVL---SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 + + G E ++++ G + + + + L + Sbjct: 394 DMAARFGGDEFMVLINGTPGTDAALAAADRLAATLAEPFVVDGHELVITTSIGVALGGDP 453 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + + L+ ++ + + + Q +++ L +R L++G+ +Y Sbjct: 454 DDRPEDLIRNADAAMHRAKLLGKARRV-VFDPAMYAQAVERLALERDLRHGLERGEFQIY 512 Query: 508 AQPIRNKEGEG---YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + + ++ + G+++P +F+P+ + L VL + LA Sbjct: 513 YQPVLDVRTRRPVEVEALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLA 572 Query: 565 THPCDKKGPR---FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 SVNL ++ I ++ + P ++ LEITE + Sbjct: 573 AWRTAFPDCAPSAVSVNLSARQFRHPSLTADIAQILAETGLPPASLKLEITESVMMDDTA 632 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 S++ + L + G ++A+DDFGTGY++ LKR D +KID F + + + D +V Sbjct: 633 STLEALRDLKQLGVQLAVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQALVE 692 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ A A L V E VET++Q L ++G +QG+L P P + Sbjct: 693 AMIAAANALRLQVTVEGVETEEQLEFLERVGCDLVQGFLFAPPMPPDE 740 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 110/571 (19%), Positives = 202/571 (35%), Gaps = 21/571 (3%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + L + + + R + S + ++ + + Sbjct: 441 LIARDVSELKQAAAALANSDARLRLALQASGTGLYELELATGAITITGAIRQRLDIRVPE 500 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + ++R F + L + + Sbjct: 501 QQPIPAALWLAWVHPDDQARIRQAFEHWQQEPHAPDRLETSFRVCPPGGRMRWVHARGQY 560 Query: 298 LISFSV----CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + L+ V + + A D LT L N AL + + Sbjct: 561 IAAAEDTAAARLVGTVNDVTDQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVHQ 620 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + + +D + ++ G + +R + L ++ L +L G E LLVL Sbjct: 621 HQHPLAVLFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVL 680 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G E + + S + + L + + E L+ Sbjct: 681 PG-ADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAM 739 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 Q+ A ++ +++ L +R A +G+++L+ QP + G Sbjct: 740 YQAKARGRN-TFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGC 798 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + ++ G+++P +F+PL + L + + +VN Sbjct: 799 EALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVN 858 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L Q N + + PQ + LE+TE + E + + +L G +++ Sbjct: 859 LSGCQFQQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLS 918 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D++KID FV+D+ T+ DA IVR+I L K +L ++AE Sbjct: 919 IDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEG 978 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VETQ Q LH GV ++QGY RP P D Sbjct: 979 VETQGQLDYLHAAGVDFIQGYYFSRPLPAED 1009 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 90/433 (20%), Positives = 177/433 (40%), Gaps = 16/433 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEF 362 + H QA D LT LPN + +E + + +D + Sbjct: 241 DITDRKMAENSLHYQAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKN 300 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI-- 420 ++ G + + S + L ++ ++ L + G E +++ + E ++ Sbjct: 301 INDTLGHTLGDELLGSFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVF 360 Query: 421 -LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + N L + + + + + ++ ++ Sbjct: 361 SILQQPFQVGNHLLYLKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNH-YQIYHP 419 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 +++ +T++++ + N + AL++ LL+ QP N + G + ++ G+++P Sbjct: 420 LITSKTSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPA 479 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 KF+P+ + L VL + R +VNL Q N + + Sbjct: 480 KFIPIAEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTK 539 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + ++ PQ + LEITE N E S + L G I++DDFGTGY++ LK++ Sbjct: 540 ILAETNLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQI 599 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + IKID F+KD+ D I+ ++ + + ++ V+AE VETQ Q LL KL + Sbjct: 600 PFNTIKIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEE 659 Query: 716 LQGYLIGRPQPLA 728 +QG+ +P Sbjct: 660 MQGFKFSKPLKPE 672 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 106/511 (20%), Positives = 192/511 (37%), Gaps = 57/511 (11%) Query: 274 LLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWL------------- 318 + + + + + +++ + Sbjct: 411 VFQDEMLLSRKDGSPIWCEVTSKAIDPDDLAKGSIWITMDITERKAADVALARAHEDLEL 470 Query: 319 --------------------------NRRWHLQALTDPLTLLPNFRALEQAPE------- 345 R AL D LT LPN LE+ E Sbjct: 471 RVKERTKELAKANMDLLVEINERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAK 530 Query: 346 -QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + + +D + ++ G + + L ++ N+ + +L G E ++V Sbjct: 531 SHQWQLAVLFIDLDRFKLVNDTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIV 590 Query: 405 LSGPETEGRLQHMVNILNS--RQ-IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ + ++ + + + + + + + ET L+ Sbjct: 591 LNEIAGSTEINGVIEDIQQNFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAA 650 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 + A A + +++ L N + AL G LY QP + G Sbjct: 651 MYHAKASGRNCA-QYFNRSLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIG 709 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSV 577 + ++ + G+++PD F+PL + L VL LA SV Sbjct: 710 AEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSV 769 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL L + +++ A + + + Y + + LE+TE NAE ++ ++++H G +I Sbjct: 770 NLSALQVQKESFAREVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQI 829 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ LKR D +KID FV+DI +T DAMI ++I +A +L V+AE Sbjct: 830 SVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAE 889 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q LL G + QGYL +P P+ Sbjct: 890 GVETNAQLELLRDYGCEQYQGYLFAKPLPVE 920 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 97/608 (15%), Positives = 215/608 (35%), Gaps = 24/608 (3%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 L+G P+ ++ + T +++ V I +V + + Sbjct: 411 LMGQILGLPIIVNNYSEIEILQPTGKMVIARIRQVKILWEEKEAFLASLVDVTDLKGAQK 470 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKL 258 + E+ ++ A + + + + GY Sbjct: 471 QLKILKQATEQSPVSVIITDAEG---HIEYVNRKFEKLTGYTRQEVIGKNPRLLKSGKIS 527 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRS 315 + + L +++ + + + + + ++ + + + + R Sbjct: 528 QDQYKQLWRTLTSGQEWHGEFHNQKKNGELFWESASISPIKNEEGVITHFIAIKEDITRR 587 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + +R QA D LT LPN QE + + +D + ++ Sbjct: 588 KAQDRILAYQANYDALTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKNVNDTL 647 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---R 424 G ++ + L +++++ + +L G E L+++ + + + + S + Sbjct: 648 GHEYGDLLLKQVAERLKKCLRKSDTVARLGGDEFLIIIPNLKQPSHCKGIAKKILSSLEK 707 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + + + L+ ++ Sbjct: 708 PFNLLEEEAFISASIGITLYPDDGDDVNALMRNADTAMYLGKRGGRND-FKFYTLGMNET 766 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 ++++ N + AL + ++ L QPI + G + +L G ++PD+F+P+ Sbjct: 767 NRTRIIIENLLHQALKKKEIYLVYQPIMELKTEKVIGAEALLRWNNPQLGQVSPDQFIPI 826 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L + V+ + + +VNL P + I Sbjct: 827 AEETGLINQLGAWVISQACQEVVQWKAQGTPISVAVNLSPRQFRDSKLLKIITDAIAVNG 886 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I+ + LEITE+ ++ S + QLH+ F ++IDDFGTGY+ L + + +K Sbjct: 887 ITNHDLELEITEKLLLEDSPGSQGILSQLHQMNFPLSIDDFGTGYSALSYLIKFPFNRLK 946 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ D+ + +V++I ++ +L V+AE VET +Q L G Y QGY Sbjct: 947 IDRSFITDMTHSQKAMGLVKTIIAMSHGLNLQVIAEGVETSEQLNSLKSQGCDYAQGYFF 1006 Query: 722 GRPQPLAD 729 RP + Sbjct: 1007 SRPLTGEE 1014 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 111/569 (19%), Positives = 224/569 (39%), Gaps = 27/569 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 L R + ++ L ++ + ++ + +A V + + I+GY + Sbjct: 677 LRRAQDALLLSEALAKQSLEELKYQKYALDKHAIVAVTDVKGRITYANDKFSEISGYSIE 736 Query: 246 VFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + +P F + V+ + + + Y + +A I Sbjct: 737 ELLGQDHAILNSGYHPKGYFKEMYRTVANGQVWHDEICNRAKDGSLYWVDTTIAPFIGDD 796 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + + + + AL DPLT LPN R L G + Sbjct: 797 GKPQSYISIRTDITQRKAAEDKSNYLALYDPLTNLPNRRLLLDRLTHALASAMRTGRGGA 856 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ G + ++ + L ++E + + +L G E +++L G + Sbjct: 857 LLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVARLGGDEFVVILEGLSEQ 916 Query: 412 G-----RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + + + + F N LL Q Sbjct: 917 EVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKNNLKSDELLKQADIAMY 976 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDE 521 Q+ AL + + +V + + +R ALD+ + L+ Q + G + Sbjct: 977 QAKKLGRN-ALSFFDPKMQEGIQARVDMEHELRKALDKNEFQLFYQMQVGLSDRAVGAEA 1035 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNL 579 ++ + + G++ P++F+ + + V+++ L + SVN+ Sbjct: 1036 LIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLKRWEQSERTRSLTLSVNV 1095 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q + ++ R+ I+P + LE+TE + E ++ + L G R ++ Sbjct: 1096 SAKQFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHIEDAVAIMNALKDIGIRFSL 1155 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ + L+ L +KID FV+DI ++ + IVR+I +A +L+V+AE V Sbjct: 1156 DDFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGV 1215 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ETQ QQ +L G + QGYL P P+ Sbjct: 1216 ETQVQQGILLDSGCMHYQGYLFSEPVPID 1244 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 106/574 (18%), Positives = 200/574 (34%), Gaps = 34/574 (5%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDF 238 + + + + E R A L +L+ ++ + Sbjct: 888 FAGRQARLVLVNDITEQLKAQQKLQESENRFRRAVIDAPLPILIHAEDGEIIQVNHAWTE 947 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL-----CLLNYNQNFLQGVETEYSLAF 293 + GY I + + L + F Sbjct: 948 LTGYTHEDIPTIADWTEKAYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGETRIWNF 1007 Query: 294 ILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG- 349 A L ++ M + + A+ D LT LPN L EQ Sbjct: 1008 SSAPLGRLADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRIEQAIKR 1067 Query: 350 --------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G + + +I L ++ + + + G E Sbjct: 1068 TQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVARFGGDEF 1127 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE-TLQPLLGQ 457 +++L + M + + F + E + LL Sbjct: 1128 VILLENLTSRTEATKMAQQITDELRSSFCLQGQDFFISVSIGIT-FPSSYEESASELLRN 1186 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 ++ + + Q T+ + L +R AL++ +L+++ QPI + Sbjct: 1187 ADIAMYRAKEKGRAR-YTIFDSKMHIQATRLLELETNLRLALEREELIVHYQPIVSLTTG 1245 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP- 573 + G++ ++ G+++P +F+P+ + L VL + + + G Sbjct: 1246 KLLGFEALVRWEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQMKAWQKEFSGLD 1305 Query: 574 --RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R SVNL L ++ + + K+ + + + LEITE +N E + Q+ Sbjct: 1306 KIRVSVNLSGKQLEYPHLINCLESILKQTGLEGKNLKLEITESMLMNNKEVVSDLLLQIK 1365 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 +I+IDDFGTGY++ L L D +KID FV + + IV +I +LA Sbjct: 1366 GKNIQISIDDFGTGYSSLSYLHYLPVDTLKIDRSFVNRMTQLGENFEIVEAIINLAHHLQ 1425 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + VVAE VET+Q L +LG + QGY +P Sbjct: 1426 MDVVAEGVETEQHIKQLKQLGCESGQGYFFSKPL 1459 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 9/168 (5%), Positives = 36/168 (21%), Gaps = 13/168 (7%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--------L 220 + + L+ M+ + R + + ++ R + Sbjct: 90 IGGIINGALLTMMIVVTVGRQLYLGQ--LNILKKIKQALKKSRSRYRAIVEEQTELICRF 147 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 L + Y + + + + NL ++ + Sbjct: 148 RPDGTLTFVNEAYYRYFEKTPEYLLEKIFLPLIPFPDQQQVLDNLKSLNQQKRVITHEHR 207 Query: 281 FLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQ 325 + + ++ ++ + R + + Sbjct: 208 VIISSGEMRWHQWTNRAIVDRQGKIIEFQAVGRDITELKQIETALREL 255 Score = 43.1 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 15/154 (9%), Positives = 35/154 (22%), Gaps = 15/154 (9%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAG 241 I+S +R A ++R + S+ + G Sbjct: 518 ILSILSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQTGEIYCDQSWWQKLG 577 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSLAF-- 293 Y + + ++ FL + A L ++ Sbjct: 578 YEPDHETMSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGDWVWMSARG 637 Query: 294 --ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + ++ R S+ + Q Sbjct: 638 KSVANDEEGNPLKIVGTHRDITESKEIEEELKQQ 671 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 108/602 (17%), Positives = 207/602 (34%), Gaps = 31/602 (5%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA-----QILWRRDIAPSLGKEK 212 + + ++ ++ +L+ R V + A + Sbjct: 338 PNTLNTRWIAFGVAATLLCVMLVILWNVQMRRQVRMRTEALHAEIARREQTEAYLKISSR 397 Query: 213 RAFTLSWLAALS-----VLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 A SW+ +L +L A L ++ Sbjct: 398 MARVGSWVLSLPEKTLYWSEEVLDIHECPPEFAPTLDSALAFYPEEWRSRIVQALEECLQ 457 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + + + + L + ++ + R A Sbjct: 458 KGDSFDEELPILTCKDKLLWIRIIGQAVYDLHGNITRIEGAIQDISAQKVAESRIQHLAF 517 Query: 328 TDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN + E + + +DN + ++ G + ++ + Sbjct: 518 YDSLTSLPNRQLFIDRLEHTLAYSARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQQV 577 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN---SRQIHWNNT 431 + ++E++ + + G E +++L E + + + + + ++ Sbjct: 578 AMRIAGCLRESDTVARFGGDEFVVLLHELSGNHQEAAAQARLVSEKILISFAHPFQFSGY 637 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 FD T+ +L + QS A + + + +V + Sbjct: 638 EHHTSASIGVTLFDQQPTTVDEILKRADLAMYQSKAAGRN-VIRFFDPEMQALIADRVEM 696 Query: 492 LNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R L + L QP + G + +L G++ P F+PL L Sbjct: 697 EEDLRNGLRNDEFFLCYQPQVDNQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGLIV 756 Query: 550 RFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 V+ + K L +VN+ L Q + +I+ + +P+ + Sbjct: 757 SVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPKRL 816 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LE+TE +N E + + +L G +IDDFG GY++ LK L D +KID FV Sbjct: 817 KLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQSFV 876 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +D++T+ DA+I R+I L K+ +L V+AE VET Q+ L G QGYL +P P Sbjct: 877 RDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPA 936 Query: 728 AD 729 + Sbjct: 937 DE 938 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 121/704 (17%), Positives = 230/704 (32%), Gaps = 61/704 (8%) Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 + W L + + + A L++ +FW G + Sbjct: 14 SFWIELLFTVVIMSLALFIRLAIAPVDAGLQYVTFFPA-------ITLAAIFW-GCRAGL 65 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT------- 187 ++F P +F + I +L+ L +L+ + Sbjct: 66 LAMAMGVGFATYFFIP-PFYSFENEGLKIMAWSNLVFLVDGLLVSFSIEAMHRYRKKSEV 124 Query: 188 -------------RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 + R L + ++L Sbjct: 125 ELAEIKLAHSQVSTLNSELDEMLHKQRETEQELLISATAFEAQDGIMITDSKGVILRVNQ 184 Query: 235 ENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 I GY + + + + + Y Sbjct: 185 AFTDITGYSSEEAVGQTPRLLKSGRHDADFYAAMWQCIKNTGQWSGEIWDRRKNGEIYPK 244 Query: 292 AFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF----------R 338 + + V + + R H A DPLT LPN Sbjct: 245 WLTITEVKSFDGSVVHYVSSQVDITARKASEDRIHNLAFYDPLTQLPNRRLLLDRLRHSV 304 Query: 339 ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + + +D + ++ G + ++ + L ++ + + +L G Sbjct: 305 SFS--LRDGRHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDTVARLGG 362 Query: 399 SELLLVLSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 E +++L G E + + + + ++ G FD + +T Sbjct: 363 DEFVVLLDGLAGNLHEAAAQAKQIGRKIIDTLNQSYDLAGHEYQSGASIGIALFDEHCQT 422 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL Q Q+ L + + +V L + AL Q + QP Sbjct: 423 AEDLLKQADIAMYQAKKAGRN-TLRFFDPEMQASILARVALEKDFKDALLQEQFYICYQP 481 Query: 511 IRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-- 566 + + G + ++ GI++P F+PL + L VL++ + L+ Sbjct: 482 VISREGRVAGAEALVRWRHSIRGIVSPADFIPLAEETGLIVPLGNWVLKTACRQLSDWSS 541 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 D + +VN+ L Q++ ++ L + +P+ + LE+TE S+AES + Sbjct: 542 RDDTRDLTIAVNVSARQLKQEDFVTTVMGLIEETGANPRRLKLELTESMLVSDAESIIVK 601 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L + G A+DDFGTGY++ L RL D +K+D FV++I T +I + +L Sbjct: 602 MNLLKEAGITFALDDFGTGYSSLAYLSRLPLDQLKVDQSFVRNIETEDSAVVICAATINL 661 Query: 687 AKAKSLSVVAEFVETQQQQALLHK-LGVQYLQGYLIGRPQPLAD 729 A L VVAE VE + Q+ L +LQGYL +P + + Sbjct: 662 AHNLKLKVVAEGVENEAQRYFLSSVHQCDFLQGYLFSKPVAIDE 705 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 101/555 (18%), Positives = 195/555 (35%), Gaps = 29/555 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLA----ALSVLLLLLCTPYENDFIAGYLVPVF---FIIFT 252 R + E+ +++ I GY Sbjct: 325 RRTAERQARLFERVFRNALEGICITDPEGIIVA---VNPAFTTITGYPADDAVGQSPRLL 381 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMV 309 + ++ A+ + Y ++ + + + + Sbjct: 382 KSHHHDSAFYEDMWRALVEEGRWEDEIWNRRRNGEVYPEWLSISAIPGPTGRTEYYVAVF 441 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 + + QA D LT LPN L ++ + + +DN + Sbjct: 442 HDITELKAKESQIQHQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLDNFK 501 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G M+ ++ + +++ + L ++ G E ++VL E E + L Sbjct: 502 QVNDSLGHMVGDIYLQQAAEQMRQMVRPQDTLARVGGDEFVVVLQDVEGERDAAQVAERL 561 Query: 422 NSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 +R + L +G F + + L+ ++ Sbjct: 562 LARFTDPVRVQEHELFVGASVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRR-YHLFT 620 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTP 535 ++ + +++ L + AL GD+ + QP + G + + ++ DG P Sbjct: 621 PAMNDRAVRRLSLEGDLHRALAAGDITAHYQPRVDLNTGLITGMEALARWIRADGSQEHP 680 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRII 594 +F+PL L +L +VNL +N+ G + Sbjct: 681 AEFIPLAESTGLIVPLGEHMLRLACAKTRALCDAGHADLHVAVNLSVHQFRHRNLVGMVA 740 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + P + LEITE ++ + ++ + QL + G +++DDFGTGY++ +LK Sbjct: 741 DVLAETGLPPHLLELEITESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQLKN 800 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L +KID F++DI + DA I +I +A L VVAE VET +Q L G Sbjct: 801 LPLTSLKIDRSFIRDIPDDPNDAAIAATIITMADRLGLRVVAEGVETPEQLNFLLLEGCH 860 Query: 715 YLQGYLIGRPQPLAD 729 +QG+L RP P + Sbjct: 861 EVQGFLFSRPLPPDE 875 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 119/697 (17%), Positives = 231/697 (33%), Gaps = 39/697 (5%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 + L + G + I G + R + Sbjct: 337 FGGMKMAWIGMLDEADQLIKPAASFGSGVEYLE---GIEISVDLSGDKGRGPTGTSIRED 393 Query: 124 RLFWLGLVT---PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 R FW + FT+ + N Sbjct: 394 RPFWCQDFQHDDATAAWHERGERFGWGASASLPLHLKDRVIGAFTLYAGEACAFDEAAQN 453 Query: 181 MLFYYLTRM--IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 +L + + + + E+R + +V + L D Sbjct: 454 LLLEMALDISFALDRFADERERKIMQDDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDV 513 Query: 239 IAGYLVPVFFI-----------IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 G+ + + G R ++ + N F++ Sbjct: 514 NTGFERITGWRHDEVVGKTATELNLWGNPADRMRLVDALQSEGRCN--NLEATFVKKNGD 571 Query: 288 EYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--- 343 + + V C+L + R + + A D LT LPN L Sbjct: 572 IFHGLMSAEKVRFKDVDCILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRY 631 Query: 344 -----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + L +D+ + ++ G + + + R L ++E + L +L G Sbjct: 632 ALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGG 691 Query: 399 SELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +L+L G E + + L + + L + + + + L Sbjct: 692 DEFILLLPG-TDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLS 750 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 + + + + + + L+N +R AL + + L+ QP Sbjct: 751 KNADAAMYRVKQASRND-FRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQ 809 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK- 571 + G + +L + G+++P +F+P+ VL + ++ L Sbjct: 810 DGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLR 869 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL + N+ + R+ + P+ + LE+TE A + +++ + +L Sbjct: 870 PMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLD 929 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G R++IDDFGTGY++ LK+ + + +KID FV+DI + D IV +I +LA + Sbjct: 930 EHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLG 989 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +AE VET Q A L G +QGY + +P P Sbjct: 990 MHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKD 1026 Score = 45.4 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 27/289 (9%), Positives = 69/289 (23%), Gaps = 18/289 (6%) Query: 52 MLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQ-------------TFVVL 98 M L + ++ G Q+ + + Sbjct: 18 MRPALVGIVVFLLAGLVAGGLVYRSEQHRRQLAQSRALAMAADHAQSLQQNLQQALGPAQ 77 Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 + R WR S+ Q + V + + + + + + +T + Sbjct: 78 FEQVVARGYDYVLWRIDPASQQ-RQIIAQSAKVPLDAVDFELKVPNAKWTLSVAPTTGWA 136 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 D + V L +LF+ +L Y+ R+ + + + + +R + Sbjct: 137 DPQGLSLKVALAALFSVLLAYSAKQAGAARVRANELQVDVNAQAVE--LVALNQRLQSTL 194 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + + Y + + L V + A + Sbjct: 195 DALPDLLFETDMDGRYLAYHSPRSELLGKTLHRVLPVAVADICLAAVHEANAVGYSHGKQ 254 Query: 279 QNFLQGVE-TEYSLAFILAV-LISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + L+ L + + + R + + Sbjct: 255 IQLALPDGAHWFELSASRKPGLPGDAPTFIVLSRDITERKKAEIKIERL 303 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 117/568 (20%), Positives = 219/568 (38%), Gaps = 32/568 (5%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL-----SVLLLLLCTPYENDFIAGYLVP 245 I +R EKR ++ A ++ + + GY+ Sbjct: 566 ARLASIAIERKRSEEALHYSEKRFRDVNDAAGEYVWEMGTDMVYTYVSNRSVDVKGYVPD 625 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + V + + + A+++ + T Sbjct: 626 ELLGHTPMEFMPVEDIPHVREIVNRAIASNTSFKLQHRDITKSGTLLWEEVNGVPFFDEH 685 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKS 351 L + A DPLT LPN R L + + Sbjct: 686 GELMGLRGTGMNITDRKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHALASSTRSGREGA 745 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--- 408 + +DN + ++ G + ++ + L ++E + + +L G E +++L Sbjct: 746 LLFIDLDNFKTLNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFVVMLEELSEQ 805 Query: 409 --ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 E + + + + ++ F ++++ LL Q Sbjct: 806 TLEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEELLKQADIAMY 865 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDE 521 Q+ L + + + LL + AL+ LY Q E G + Sbjct: 866 QAKKAGRN-TLRFFDPQMQETVIARALLERELSKALENDQFQLYYQIQMTDLNEPFGAEA 924 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNL 579 ++ + + G++ P+ F+PL + L L VL++ + + +VN+ Sbjct: 925 LIRWIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNV 984 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + Q + +I + +R+ I+P+ + LEITE ++ E ++ + L K G + A+ Sbjct: 985 SARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAM 1044 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ + LKRL D +KID FV+DI T++ D IV +I +A + +L V+AE V Sbjct: 1045 DDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGV 1104 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ET+QQ+ LL + G QGYL G+P P+ Sbjct: 1105 ETEQQRQLLIESGCSQYQGYLFGKPAPI 1132 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 122/601 (20%), Positives = 230/601 (38%), Gaps = 27/601 (4%) Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 F I +V + + + + + L R + I + +I S + Sbjct: 410 GFIAIVGPIDDLVLISAADITQVGFTISAALLERDELFLQIQTIAEQLEIVSSTTNDGIW 469 Query: 215 FTLSWLAALSVLLLLLCTPYENDF-IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 ++ + L + ++ + F + S+L Sbjct: 470 DWDIITNQVTWNVRSLDIFSSVGEPLPTDSESFLNLVHPEDYYNVIESFKMHQYEGSSLK 529 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + Q +G Y + ++ ++ + + ++ A D LT Sbjct: 530 MEFRIQGEKEGEMWVYLTGDSIRDENGQAIRIIGSITNISEKKQQEKQIMHLAFHDGLTG 589 Query: 334 LPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN R A+ A + +D + ++ G I+ + L Sbjct: 590 LPNRRLLRSRLELAMTDADRYNYKLGLLLIDLDRFKVINDTLGHQAGDELIQKVADVLEL 649 Query: 386 LMQENEK----------LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTG 432 M+ + + +L G E +++L+ LQ N++ N Sbjct: 650 TMRSPDTHSRAKQEHTTVARLGGDEFIILLTHITDVSDLQASANLIIEKFKEPFFIQNQD 709 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + L G ++ + ++ ++ T ++ + Sbjct: 710 VFTSASIGISVYPDHGRDYDSLTGNADIAMYRAKENGKNQ-MEMYSSEINTLTMERFQME 768 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R AL++ + +L+ QP N E G + +L D GI++P +F+PL + L Sbjct: 769 NQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLAEETGLII 828 Query: 550 RFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VL+ + P+ SVN+ L +K+ + + + + Q + Sbjct: 829 PIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDTQLPTQYLC 888 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE A N + SM +++L + G +IAIDDFGTGY++ LK+L IKID F++ Sbjct: 889 LEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIKIDKSFIR 948 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D+ + D IVR+I +A + L+V AE VET+ Q+ +L + YLQGYL +P P Sbjct: 949 DMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLYSKPLPAE 1008 Query: 729 D 729 + Sbjct: 1009 E 1009 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 92/429 (21%), Positives = 179/429 (41%), Gaps = 16/429 (3%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHY 367 + +R A D LT LPN L EQ + + + +D+ + ++ Sbjct: 442 KEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSL 501 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 G + ++++ L ++ + + + G E ++VL+ + + + Sbjct: 502 GHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFAL 561 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 H + L + F + + LL + + + ++ Sbjct: 562 PFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRN-NYQFFTDELNKS 620 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 ++ +L +R AL++ +LLLY QP+ + G + +L + ++TPDKF+ L Sbjct: 621 AYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINL 680 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L V+ ++ + R ++NL K++ I R+ Sbjct: 681 AEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSET 740 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + + LEITE N E + + +L G I+IDDFGTGY++ LK+ + Sbjct: 741 GVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTL 800 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+D+VT+ D IV +I +A + + V+AE +E ++Q L + QGY Sbjct: 801 KIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYY 860 Query: 721 IGRPQPLAD 729 +P +++ Sbjct: 861 FSKPVTVSE 869 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 108/573 (18%), Positives = 202/573 (35%), Gaps = 27/573 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 R + +Q + ++ + GY Sbjct: 408 LAVYFRDVSERRNSQEQLMLLETGIARLNDIVVIVEASPHHGSGPQIVFVNDAFERHTGY 467 Query: 243 LVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILA 296 G G + + A+ + + + +A Sbjct: 468 TRDEVLSRMPGMLQGPGTRQDELARIFSALQQWKQARGELVIYRKDGGSFWVDLEIVSVA 527 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------A 348 + + R + + + + H A DPLT LPN + L EQ Sbjct: 528 AQNGDLTHWVAVGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQALADCTITRQ 587 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + +DN + ++ G ++ + L +++ + + +L G E +++L Sbjct: 588 EGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGDEFVVMLQDL 647 Query: 409 ETEGRLQH-----MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 T+ + + + F+ Q ++ LL Q Sbjct: 648 GTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQADL 707 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEG 518 Q+ + + + + L +R L + L++ QP ++ G Sbjct: 708 AMYQAKTMGRN-TVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQVDREQRITG 766 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFS 576 + +L G+++P +F+P+ + L VLE LA + G + Sbjct: 767 VEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIA 826 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + ++ K I P + LE+TE E ++ + L G Sbjct: 827 VNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVT 886 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFG GY++ LKRL D +KID F+ D+ ++ DA I +I LA++ L V+A Sbjct: 887 LALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIA 946 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+ Q++ L LG Y QG+L P P+A+ Sbjct: 947 EGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAE 979 Score = 45.4 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 27/285 (9%), Positives = 65/285 (22%), Gaps = 11/285 (3%) Query: 55 ILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY 114 + F G + T ++ + + A L VL + T Sbjct: 36 LAARFCGTGAAILHLAGEETTSSSWSVGLPEKADSLADFYAQVL--LRGGQPLTITDAAT 93 Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 T GL + + + D +++L Sbjct: 94 DPTLSRHPLVAGPAGLRFFAAVPLIASDGTPLGVLAVMDAAARACRDGDLDALNILGRQV 153 Query: 175 AVLIYNMLFYYLT--RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 + + R +++ + + A +W L+ L L + Sbjct: 154 VAQLDLRRQHKFLADRSAEREQQSRMRLQHSENRLHIAMRTAQMGNWSLNLADDSLTLSS 213 Query: 233 PYENDF-----IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + + L + G+LR+ + G Sbjct: 214 EFPAILGTSAAMPQTLEELLLHYAAESRGRLRHVISECARKGTPFDEEAQMLTAQDGRRW 273 Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + ++ + ++ + + A+ LT Sbjct: 274 VRIIGEVVRDGQGAITRIQGALQDINARKQAQEETLRLAMR--LT 316 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 110/586 (18%), Positives = 222/586 (37%), Gaps = 32/586 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 +I + Y ++ P + E + ++ A +L+ + Sbjct: 538 GTVIDVEISGYPLQLHGKPALFNSSRDITERKKIEVEIQIAATAFEAQEGMLITDADRNI 597 Query: 230 LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L I GY + + + + + Sbjct: 598 LRVNRAFTDITGYSAEEVIGKNPRILSSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNG 657 Query: 287 TEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y + + + + + + A DPLT LPN R L Sbjct: 658 EVYPERLAITAVKDARGVVINYVASLSDITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDR 717 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +Q + L +DN + ++ G + ++ + + L ++E + + + Sbjct: 718 LQQALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVAR 777 Query: 396 LPGSELLLVLSGPETEG-----RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 + G E +++L E + + + + S + H + FD Sbjct: 778 IGGDEFVVMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFEVHSTPSIGATLFDSR 837 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + + L Q Q+ + + + + L +R ++++ + L+ Sbjct: 838 PQIIDDLFKQADIAMYQAKKAGRN-TMRFFDPQMQDTLNTRTALEADLRKSIERREFNLF 896 Query: 508 AQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + G + ++ + G+++P +F+PL + +L L VL+ L T Sbjct: 897 YQIQVDEMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKT 956 Query: 566 HPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + + +VN+ Q + A ++ ++Y I P + LE+TE N E + Sbjct: 957 WQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDT 1016 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L + G + ++DDFGTGY++ + +K+L + +KID FV D+ + D IVR+I Sbjct: 1017 ILIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAI 1076 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AK+ L V+AE VETQ+Q+ LL G + QGYL +P P+ + Sbjct: 1077 IAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIRE 1122 Score = 66.2 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 19/203 (9%), Positives = 48/203 (23%), Gaps = 13/203 (6%) Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 L + + V + D + + +A + VV + L L+ + L Sbjct: 257 RGELTAFRASRLYPFAVLTHIDRTRALQKWQAEAKTLLAVV-IPVLLAISLLAMAFYRRL 315 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 + A+ L R + + A + + I GY Sbjct: 316 AQNEAQRREAERLQRINATVFDSSAEAIIITDLNANI------ISVNPAFTQITGYSPED 369 Query: 247 FF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + + L A+ + Y++ ++ + Sbjct: 370 VLGKNPRILSSGQQSKGFYRELWEALLRDNFWQGELVNRHKNGSLYNIHLSISASRDGTG 429 Query: 304 ---CLLYMVRIYHRSEWLNRRWH 323 + + + Sbjct: 430 QLQHFIGVTTDITERKQHESELR 452 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 109/562 (19%), Positives = 213/562 (37%), Gaps = 34/562 (6%) Query: 200 WRRDIAPSLGKEKRAFTLS--WLAALSVLL-----LLLCTPYENDFIAGYLVPVFFIIF- 251 DI E + + ++ +L+ +L I GY Sbjct: 269 ISTDITALKNAETSLRIAATAFESSDGILITDAGCSILQVNSAFTTITGYSAEDVVGKNP 328 Query: 252 -TLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLL 306 L G+ F W V+T + Y ++ + + Sbjct: 329 RILSSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYV 388 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 + S+ + + A DPLT LPN L Q + + +D Sbjct: 389 SVFTDISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSSRTGKKGALLFVDLD 448 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGR 413 + + ++ G ++ L ++ + + + G E ++VL + Sbjct: 449 HFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVVLEDLDRNATEAAAI 508 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + N + S + F G++ ++ LL Q Q+ Sbjct: 509 AEQIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLLKQADISMYQAKKAGR 568 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKY 528 L + + + + + L + +R A+++ L LY Q + + G + ++ + Sbjct: 569 N-TLRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQRMVGAEALIRWIHP 627 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQ 586 + G ++P +F+P+ + L V+ + LA +KK +VN+ Sbjct: 628 ERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSAHQFRA 687 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + + I + LE+TE + + + + L G ++++DDFGTGY Sbjct: 688 LDFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLDDFGTGY 747 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+L D +KID FV+D+ + DA++V++I DLA ++V+AE VET+ + Sbjct: 748 SSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVETELELD 807 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 +L G + QGYL GRP P+ Sbjct: 808 ILKGYGCRLYQGYLFGRPVPIE 829 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 677 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 108/600 (18%), Positives = 206/600 (34%), Gaps = 36/600 (6%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ------ILWRRDIAPSLGKEKRAFTLS 218 T ++ + ++M F + A ++ E+R Sbjct: 366 TWSEIQGRTGRNVTFSMAFGVSQMRLGDRRTAICVVQDITRRKQAEQALRDSEERLKLAV 425 Query: 219 WLAALSVLLLLLCTP---YENDFIAGYLVPVFFII-FTLGVGKLRYPFLNLTWAVSTL-- 272 V + + +FI L ++ +P Sbjct: 426 RATRSGVFDVDYANGIFWWSPEFIEMLGYEGSPPGQADLLFREILHPDDRPAALAQIERY 485 Query: 273 -----CLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + + + V + + + + Sbjct: 486 LAGKSGDYHAFYRLRHRDGSLIWIEARGQAIRDDRGRPVRITGTMTDVTDRKRFEEQLMY 545 Query: 325 QALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 + DPLT LPN L+ + + L +D + ++ G + + Sbjct: 546 VSTHDPLTGLPNRTLLQDRLQHAADQAERKGNSVAVLLLDLDRFKLVNDSLGHQVGDKLL 605 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 R+I + L ++ + + +L E L++ + + S+ + L Sbjct: 606 RAISQRLASSVRPADTIGRLGADEFLIIAEDLTEPQMAARVAETVLAGLSQPFGLDGQQL 665 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + F G+ + LL + + ++ ++ L + Sbjct: 666 FITCSIGITLFPGDATDIGALLRDADTAMHTAKSAGGN-GYRFFTPEMNEAAVARLSLEH 724 Query: 494 TIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R A+DQG L+ QP + + G + +L + G++ P F+P+ + + Sbjct: 725 ALREAIDQGQFELHYQPKASLETMQTVGVEALLRWRHPEMGMIPPSTFIPVAEETGMILA 784 Query: 551 FDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + L+ + +VN+ + + A RI L Y + P + L Sbjct: 785 IGDWVLRAALEQINRWERAGLEPLPVAVNVSVRQITSSHFADRIQSLLDEYGVRPDLLEL 844 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE SN + +L G RIA+DDFGTGY++ L+RL +K+D FV + Sbjct: 845 EITETAMMSNMAFIADGLAELRGRGIRIAVDDFGTGYSSLSYLRRLPITTLKVDRSFVSE 904 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +N I +I + + L+VVAE +ETQ+Q L + QG+LIG P P A+ Sbjct: 905 APSNADTGAIAATIIAMGRQLGLTVVAEGIETQEQLDFLRRHRCHEAQGFLIGFPVPAAE 964 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 677 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 112/566 (19%), Positives = 204/566 (36%), Gaps = 29/566 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 +TR I + ++ A + + I GY Sbjct: 253 GMTRNITRRKMVETQLSLASKIFNNSQEGMVITDRNANI------IDVNTAFTQITGYRS 306 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--- 298 + + L + T + + Y ++ + Sbjct: 307 EEVIGKNPRILRSGHHDQGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQLATISAVMDD 366 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGK 350 + + + + + + A DPLT LPN L EQ Sbjct: 367 KNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQTF 426 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L ID+ + ++ G + + L ++ N + ++ G E +++L + Sbjct: 427 ATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVHS 486 Query: 411 EGRLQHMVNILNS---RQIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + L V + S + N L + + + + + LL + Sbjct: 487 DVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAMYLAK 546 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEIL 523 + ++ ++ V + + + A+++ L L QP N E G + +L Sbjct: 547 KNGRN-GYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLEFQPQYNLEQHAIVGVETLL 605 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPL 582 + G++ P F+P+ + L VL + R +VN+ L Sbjct: 606 RWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNVSAL 665 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L Q N R+ + + Q + LEITE + + ++ ++ QL + G I++DDF Sbjct: 666 QLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDDF 725 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK L + +KID FV D+ +N+ IV +I + K SL VVAE +ETQ Sbjct: 726 GTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQ 785 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q L + G Y QGYL RP Sbjct: 786 EQADYLFEKGCVYGQGYLFSRPVSAE 811 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 677 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 105/555 (18%), Positives = 202/555 (36%), Gaps = 30/555 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVF---FIIFTLG 254 + + + + V+L ++ + GY F Sbjct: 391 EQRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVVGQNPRFLQS 450 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRI 311 R +L++ A+ + + L + + + Sbjct: 451 GRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHVTHYVGVFTD 510 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + + R A DPLT LPN + E + L +D + + Sbjct: 511 ISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFLDLDRFKTV 570 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + G +R++ L ++E + L +L G E +++L E + L Sbjct: 571 NDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPADAAVVAKNLVE 630 Query: 422 -NSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + N + + + + + L+ ++ A E Sbjct: 631 VLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQGRN-TYGFYTE 689 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG-IMTP 535 + T+++ L +R AL+ + ++Y QP+ + G + ++ G +++P Sbjct: 690 DLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALVRWK-PQGEPMVSP 748 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRII 594 F+P+ + L VL + + + +VNL +++++ + Sbjct: 749 AAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSAEQFRRQDVSAMLA 808 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + LEITE E ++ +E+L + G +AIDDFGTGY++ LKR Sbjct: 809 TVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDFGTGYSSLAYLKR 868 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +KID FV+DI ++ D I +I +A+A ++V AE VE + Q LL LG Sbjct: 869 FSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGEAQLELLRGLGCG 928 Query: 715 YLQGYLIGRPQPLAD 729 QGYL P P + Sbjct: 929 SYQGYLCSPPLPADE 943 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 16/173 (9%), Positives = 38/173 (21%), Gaps = 21/173 (12%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC--------TPY 234 + + +++ F Q R+ A +R + + L + Sbjct: 246 YLHELPLVLDKAFRQAELVRERAALRTMTQRLEEVLDCSPSVNYTLTRGEEGWVGTWMSH 305 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL---CLLNYNQNFLQGVETEYSL 291 + G+ V + AV + + + Sbjct: 306 NLTRMTGFSVAEALAQGWWARTVHPDDLERASRAVRAVEEDGHYVHEYRIRCADGGVRWI 365 Query: 292 AFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHL-----QALTD--PLTLL 334 L + ++ + L ++ D LT L Sbjct: 366 RDELRAVRDEGGRVVRVAGVWIDITEQRQATELLRLNSAVIESTHDGVVLTDL 418 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 118/572 (20%), Positives = 210/572 (36%), Gaps = 36/572 (6%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV-------- 244 ++ E + L + +VL+L + ++ + A L Sbjct: 553 IRTDITERKKSAEAIERSEAKLHILFDSNSDAVLMLDMQGFFDCNKAALRLFGCATTEEL 612 Query: 245 -----PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV-ETEYSLAFILAVL 298 + + + + +L+ + Sbjct: 613 CKHHPADMSPATQPNGIDSLTLANEYIATATRDGNAQFEWLHKRMDSGQSFPADVLLSSM 672 Query: 299 I-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AG 349 V L VR + A DPLT LPN R L + Sbjct: 673 KLDGRVVLQATVRDITERKKSESEIVRLAFYDPLTGLPNRRLLMDRLQHALTSNLRNDKH 732 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +DN + ++ G + + + + L ++E + + +L G E +++L Sbjct: 733 GAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARLGGDEFVVLLDNLS 792 Query: 410 TEGR-----LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + + + F + + LL + Sbjct: 793 HGHDNAGAHTKRVAEKILQALNLSYMLQGYEYHSSPSIGVALFCADASSPDELLKRADSA 852 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGY 519 QS A + +E + L + + AL+Q L+LY Q N + G Sbjct: 853 MYQSKAAGRN-TVRFYDERTQALLLARAELEHALHHALEQQQLMLYYQVQVNADYQPVGA 911 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSV 577 + +L G+++P +F+PL + + VLE L D +V Sbjct: 912 EVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASDVFKCDLVLAV 971 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ + + A ++ L ISP + LEITE + E+ + ++QL K G Sbjct: 972 NVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENIIATMQQLKKIGLNF 1031 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ +KRL D +KID FV+DI + D IVR+I +A++ L+++AE Sbjct: 1032 SMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQSMKLNIIAE 1091 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +ET+QQ+ LL G QGYL +P PL+D Sbjct: 1092 GIETEQQRRLLALKGCTNYQGYLFSKPVPLSD 1123 Score = 50.4 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 10/148 (6%), Positives = 32/148 (21%), Gaps = 6/148 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 ++ +R ++ + ++ V + I+ Y Sbjct: 422 LLISRESQEKLAASEAHSKRIAEELQYQKFALDEHAIVSVTDVTGTITDVNERFCQISQY 481 Query: 243 LVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + +P F + A++ + N + Y L + + Sbjct: 482 SREELIGKNHKMLNSGWHPKGFFKAMYRAITRGQVWNDEVCNRAKDGSLYWLDMTVVPFM 541 Query: 300 SFSVC---LLYMVRIYHRSEWLNRRWHL 324 + + + Sbjct: 542 DECGKPYKYIGIRTDITERKKSAEAIER 569 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 107/576 (18%), Positives = 214/576 (37%), Gaps = 30/576 (5%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLLL-----LCTP 233 L + R + + R +I E+R + A + + + Sbjct: 367 LSMHFNRYMDRLVDFRDELRAEIDERTRAEQRLRLYEKVFENALEGISITDKSGVMVAVN 426 Query: 234 YENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 I G+ + + + + + Y Sbjct: 427 PAFTTITGFTSEEVIGKNPRVLKSDMHGEEFYGEMWTTLKARGSWHGEIWNRRKNGESYP 486 Query: 291 LAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 ++ + + + + + D LT LPN + Sbjct: 487 EILSISSIRDDDGEIANYVAVFHDISDMKHKEEQLAHHLYHDGLTGLPNRVLVLDRLSMA 546 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +DN + ++ +G ++++ L+ L ++ + + + G Sbjct: 547 LSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDTVARQGGD 606 Query: 400 ELLLVLSGPETEGRLQHMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L+V+ E + + + + + + + + L+ Sbjct: 607 EFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDGQDPASLVK 666 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 QS A + +S + +++ L + +R AL + + +Y QP + Sbjct: 667 NADMAMYQSKAKGRNSYF-LFTQQMSERIAQRLTLESDMRRALKEREFTVYFQPKVDLAS 725 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KG 572 E G + ++ +K DG I++P+ F+P+ + L VL++ K + Sbjct: 726 GEVSGLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCSA 785 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VNL P+ Q+++ ++ +R + + LEITE ++ +SS+ + +L + Sbjct: 786 LTVAVNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSVAQLNRLVE 845 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G I+IDDFGTGY++ LK +KID F++DI + DA IV ++ +A+ + Sbjct: 846 LGITISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMGI 905 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET++Q LL G +QGY RP PL Sbjct: 906 GVVAEGVETKEQLDLLATFGCATVQGYYYSRPLPLE 941 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 117/559 (20%), Positives = 217/559 (38%), Gaps = 32/559 (5%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTL 253 + K A ++ + +L+ +L I GY + Sbjct: 477 SERRQKDEALKLASSVYQSSNDGILVTDEKNRILDVNPAFTRITGYTLEDVRGKDPGIFQ 536 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVR 310 + + ++ L+ ++ ++V+ + Sbjct: 537 SGKHDAQFYQQMWQSILDDGHWQGEIWDLKKNGELHAKWLSISVIRRADGSIYRHVGQFS 596 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 + + QA D LT LPN R Q + L +D + Sbjct: 597 DITEKKRKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSGRYGALLSLDLDQFKR 656 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-----RLQHM 417 ++ +G M + + R L ++E + + ++ G E L++L+G +E R + + Sbjct: 657 LNDTFGHSMGDKLLIEVARRLTSCVREEDTVARMGGDEFLVILNGLGSEQNEAAIRAELI 716 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + R + T F G+ + + LL + QS A A+ Sbjct: 717 AEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRN-AI 775 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGI 532 + + K+ L +R AL++ + LL+ Q + G + +L G Sbjct: 776 CFFDSSMQEILEKRGQLETALRGALERKEFLLHYQLQMDSSGRPIGAEALLRWNNAKLGS 835 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIA 590 ++P +F+P+ + L VLE+ LA D +VN+ + + Sbjct: 836 VSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAAFV 895 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ + ++ I P + LE+TE + S+ +E L G + ++DDFGTGY++ Sbjct: 896 AKVRNVLQQSGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLS 955 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L RL D +KID FV+DI T+ DA IV++I +A + + V+AE VET++Q+ L Sbjct: 956 YLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLDL 1015 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G Q QGYL +P P+ + Sbjct: 1016 RGCQAYQGYLYAKPMPIEE 1034 Score = 50.4 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 14/164 (8%), Positives = 39/164 (23%), Gaps = 16/164 (9%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-- 233 L+ +L +VS F R+ + E+R + + + L Sbjct: 324 FLLLWLLGSVTLLTVVSLTFYFRSIRQSRSAVAASEQRLRLILGSVSNGIWGLDKDGNTT 383 Query: 234 ----YENDFIAGYLVPVFFIIFTLGVGK-----LRYPFLNLTWAVSTLC---LLNYNQNF 281 D + +F + YP + + + ++ Sbjct: 384 FVNAAAADMLGYTPEELFDKPMHATIHHSYPDGTHYPAERCPMHATLVDGKPRMGIDEVL 443 Query: 282 LQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWH 323 + +E + + + + + + Sbjct: 444 WRKDGSELYVDYSSHPIRSHGEMEGAVVVFEDISERRQKDEALK 487 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 102/566 (18%), Positives = 210/566 (37%), Gaps = 27/566 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + + I + E R L ++L+ + A ++ Sbjct: 131 LAARVHTHIALKVAYRHLKDSELRYRKLVETTPDAILVEGEEGIVFLNSAAVKMLKADNP 190 Query: 250 IFTLGVGKLRYPFLNLTW----------AVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 LG L + + +V Q + + Sbjct: 191 DKLLGGALLDFVLDDQKEYAAMQLKQACSVDRSAGPPEVMLLQQLTGGRVEVEVNCIPIS 250 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGK 350 S C ++++R QA D LT LPN E+ Sbjct: 251 YHRSPCHMFVLRDITERRRQEAAIEFQATHDALTGLPNRSLFLDRVTQSINHARRNESRL 310 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G +R + + L + + L + G E +L++ E+ Sbjct: 311 ALIFIDLDKFKLINDTLGHNAGDDLLRIMSKRLQECTRNCDTLARFGGDEFVLLVDNLES 370 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E L H+ L S + + F + + ++ L+ ++ Sbjct: 371 EADLTHLAARLISSVSAPVLLLGQSHSITCSLGISSFPEDGDNVEVLMRHADIAMYRAKE 430 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + + +++ L ++++ AL+ + +L+ QP + + G + ++ Sbjct: 431 SGRN-SYQFFTHQMQDRLNERLKLESSLKQALENDEFVLHYQPQVDLSTGKIIGLEALIR 489 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 G++ P F+P + L + V+ ++ K L + ++N+ L Sbjct: 490 WQSPTLGLVPPGDFIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVPVAINISALQ 549 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +++ + + Y + P+ + LE+TE + + +S+ +++L G ++IDDFG Sbjct: 550 FMEQKTEELVKQALNEYMVEPKYLELELTESLSMLDPVTSISLMQRLKDIGVSLSIDDFG 609 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY+N LKR + +KID FV + N D IV++I ++++ L +AE ET Sbjct: 610 TGYSNLSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAG 669 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q ALL +QG+ RP P A+ Sbjct: 670 QIALLAAENCDAIQGFYFSRPLPEAE 695 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 102/614 (16%), Positives = 206/614 (33%), Gaps = 42/614 (6%) Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 FD ++ ++ ++ I + +Y+ R + R Sbjct: 116 IFDAGTAVARIEASRSLTPLLLRTFAVALCSAIIAAVVFYMLRTLPLRAT-----SRAYQ 170 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT------------- 252 E + L + L + DF A ++ Sbjct: 171 ALDESESKYRLLYESMREGMALHHMDFDENGDFAAISVIDANPSCAAMFGCDPQTLIGSD 230 Query: 253 ---LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV 309 L R L + + + + + + + + Sbjct: 231 SIALFGETFREYLSELLRLLEQGTSIQFELTLPRTDN-----LYSVHAFSPDHGLVATLF 285 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLE 361 ++ A D LT LPN Q + L +D + Sbjct: 286 EDITERRKSEQQIQHMAYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFLDLDRFK 345 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + R L ++ + L +L G E +++++ + + L Sbjct: 346 DINDTLGHSAGDQLLIQVTRRLGRQIRSCDTLARLGGDEFVVIVTDLGKKMNATRVAQDL 405 Query: 422 N---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L + F + + L+ S + Sbjct: 406 INAIQPPFLIAGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNR-YNFYS 464 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTP 535 ++ + ++ +R AL++ + + QPI N + ++ G + P Sbjct: 465 ASMNQKALMRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRWNHPTRGRIPP 524 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRII 594 D+F+ L + L VL ++ + T RFSVN+ + +++ A + Sbjct: 525 DQFIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQIERQDFAEIVR 584 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + +E+TE ++++++ ++ L ++G AIDDFGTGY++ +K Sbjct: 585 NALRESGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFGTGYSSLGYIKT 644 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D IKID FV+DI T+ D IV +I +++ + +AE VET +Q L + G + Sbjct: 645 LPIDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRFLQERGCE 704 Query: 715 YLQGYLIGRPQPLA 728 +QGY RP Sbjct: 705 EIQGYYFHRPLSAE 718 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 108/609 (17%), Positives = 222/609 (36%), Gaps = 29/609 (4%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 D + + + + L V+I ++ + + R + Q + + Sbjct: 340 DLGSQAERWLHETLDSIKQGAYVVLGLFVVIGAVISWLVRRQVRQMFLLQRDKELILNAA 399 Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII--FTLGVGKLRYPFLNL 265 + ++ + DF+ Y+V ++ V + +P Sbjct: 400 GDGIVGVDRTGRASFVNPAAARMLGYDAEDFLRRYVVETIPVVLANGEHVMEQDHPISQT 459 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRW 322 LC+ + F + T S+ ++ LI + + + + R + R Sbjct: 460 RQLEQGLCVRSDLDAFRRRDGTIISVEYVATPLIGSAGQHEGAVLIFKDLTRQQQAEERL 519 Query: 323 H-------LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + D LT LPN R + + S + +D + ++ Sbjct: 520 EEKKQLLDHMSNHDSLTGLPNRRLFQDRLYHAIERARRSSSEMSVLFIDLDRFKKINDSL 579 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 G + + S+ R + ++ ++ L +L G E +++L + L S Sbjct: 580 GHELGDKLLISVARRMQSHLRRSDTLARLGGDEFVVILEESSHSHFAAVIARNLLNELSE 639 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + L + R+ + E + L+ + + ++G+ Sbjct: 640 AFDVESHRLFVTASIGISRYPYDAEDVVGLMSSADAAMYHAKSRGRN-NFQFYAPEMNGR 698 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 + + +R AL +Y QP + G + +L + G++ P F+ L Sbjct: 699 AQDFLEMETQLRDALALEQFEVYYQPQYDMRDQTLVGAEALLRWNHPERGMVPPGDFIAL 758 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + VL + + + R +VN+ N++ + ++ ++ Sbjct: 759 AEETGAIVPIGEWVLMQVCRQNRQWMDEGLTPVRVAVNISIAQFRS-NLSQTLEQVLEQS 817 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + + LEITE + E ++ + +L + G I+IDDFGTGY++ L++L D + Sbjct: 818 GMPAELLELEITESMLMEDEEETITLLNELKEKGLHISIDDFGTGYSSLSYLRKLPVDKL 877 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+ +V N DA I SI L + L ++AE VE ++Q+ L + QG+L Sbjct: 878 KIDRSFIAHVVHNQSDAAITGSIIALGQNMDLRILAEGVEHEEQRDFLLQHRCYIAQGFL 937 Query: 721 IGRPQPLAD 729 RP D Sbjct: 938 YARPMTAED 946 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 97/556 (17%), Positives = 198/556 (35%), Gaps = 30/556 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFIIFTLG 254 +R A + L + ++ L+ + + + GY Sbjct: 261 RKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTADIQGFGMRA 320 Query: 255 VGKLRYPFLNLTWAVSTLCLLN---YNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMV 309 + + ++ I + + ++Y+ Sbjct: 321 FIVPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPIEIAGETQGIVYIY 380 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNL 360 + + + QA D LT LPN E+ + + + ++ Sbjct: 381 QDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTRARRRGDSQYAVLMIDLNKF 440 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + R L ++ + + +L G E ++L +T+ + +V Sbjct: 441 KGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVILEEFKTKKEVMTVVER 500 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + + LL ++ + Sbjct: 501 IGVGLGKPFVLCGKTVTPEASIGIVLHTRDYAAADDLLRDADIAMYRAKEQGRASMI--F 558 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + + + + + L +R AL+ G+LLL+ QPI + G++ ++ D G++ Sbjct: 559 DRKMHQEILEAISLETDLRQALEAGELLLHYQPIVDVKDSRIVGFEALVRWDHPDRGLVP 618 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAG 591 P +F+PL + L V++ + L + SVN+ ++ + Sbjct: 619 PGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVKDGLVE 678 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + ++ + P + LEITE +AE + + +L G +IAIDDFGTGY++ Sbjct: 679 HVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVKIAIDDFGTGYSSLSY 738 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L++L D +KID F+ + IV+SI LA++ L+V+AE VE Q L Sbjct: 739 LRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIAEGVECPDQLDRLRLA 798 Query: 712 GVQYLQGYLIGRPQPL 727 QG++ RP Sbjct: 799 DCDKAQGFMFSRPVEA 814 Score = 60.0 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 20/226 (8%), Positives = 47/226 (20%), Gaps = 32/226 (14%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 S T + + V + +L + L R I S A+ R Sbjct: 85 SLRGAAFLRETRWAAGEGDAADVRVSQFPVGMLGDRPITCMLFRDIASRLLAEDRLR--- 141 Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTPY---ENDFIAGYLVPVFFIIFTLGVG----- 256 E++ ++ A + Y Y + Sbjct: 142 ----DAERKYRSIFENAVEGIFQTTPAGRYLEVNRTLARIYGFESVAEMREFFRDIRNQL 197 Query: 257 --KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRI 311 R + + + ++ + T ++ V+ V Sbjct: 198 YVDPRRRDDFVRELAAHDQVRDFESEIRKKDGTVIWISENARVVRGADGLPAYYEGTVVD 257 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRI 357 + Q Q + ++ + + Sbjct: 258 ITDRKRAEAALATQ-----------RAYFTQ-LFANSPQAIALIDM 291 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 101/572 (17%), Positives = 206/572 (36%), Gaps = 29/572 (5%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 L Y R ++ A + A +W + + Sbjct: 117 LLGYRIRYLLRAAAAVEKLATTEVSLTHAQALAHVGNWEFQAG----RTDGYWSPELYRI 172 Query: 242 YLVPV------FFIIFTLGVGKLRYPFLNLTWAVSTLCL-LNYNQNFLQGVETEYSLAFI 294 + F + + + ++ T + + + TE + Sbjct: 173 LGLDAAHAPPTFERLLQAVPADEQPLLVQSFTSLRTEGVPFSLEHRLVHADGTERCVLHQ 232 Query: 295 LAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------ 346 + ++ +V+ + R A D LT LPN L EQ Sbjct: 233 AESGRDPNHAIILRGIVQDITERKMQQGRIEYLANHDALTGLPNRNLLSDRMEQAMSQAR 292 Query: 347 --EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D + ++ +G + +R + L +++ + + +L G E +++ Sbjct: 293 RTGQLVAVMVLDLDRFKHINDSFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDEFVVM 352 Query: 405 LSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L T+ + + + L + + + LL Sbjct: 353 LVNLATQADADVIARKILDTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAA 412 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 + H + + +Q +L N + A+ +L LY QP + + G Sbjct: 413 LYAAKEHGRN-CYRFYTRELGARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISG 471 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSV 577 + ++ + G++ PD+F+P+ L VL + + R +V Sbjct: 472 VEALIRWRRPGIGVIPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPIRIAV 531 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL Q+++A + + ++P ++ LE+TE + + + + +L G + Sbjct: 532 NLSARQFRQQDVAAMVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVL 591 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ LK L D++KID F+ D+ T+ A + RSI +A++ + VAE Sbjct: 592 SLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAE 651 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET+ Q + L++ +QGY P + Sbjct: 652 GVETEAQLSFLNRHRCHAMQGYYFSHPVTGDE 683 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 100/555 (18%), Positives = 200/555 (36%), Gaps = 32/555 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 + + + A + ++ ++L+ ++ + + GY Sbjct: 368 EQKRAEESLRLAAMVYENSSEAILVTDADNLIIAVNPAFEQMTGYAAAEVLGKNPRIFKS 427 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRI 311 R + ++ A+ T + + EY + V+ + + + Sbjct: 428 GRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRDDDGAIYRHVALFTD 487 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + + QA D LT LPN + EQ + + +D + + Sbjct: 488 ITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGLSMALLLIDLDRFKEV 547 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + G + R + ++E++ + +L G E +++LS E + + + Sbjct: 548 NDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSELEDMASIDRVAQDILG 607 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + + L L + + + Sbjct: 608 SLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYVAKYAGRNR-FNYFTKD 666 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + ++ L N +R A+ G +Y QPI + + + ++ G+++P + Sbjct: 667 MQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAE 726 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRII-- 594 F+PL + L V ++ + + + SVN P+ A + Sbjct: 727 FIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQISVNKSPVQFRH---AESLSWP 783 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++ H+S ++I+EITE + + G ++AIDDFGTGY++ LK Sbjct: 784 EYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAIDDFGTGYSSLSYLKE 843 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +KID FV+++ T D + +I +A V+AE VET Q LL G Sbjct: 844 FDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVETSTQHELLAAAGCD 903 Query: 715 YLQGYLIGRPQPLAD 729 Y QGYL RP P + Sbjct: 904 YGQGYLYSRPLPPEE 918 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 13/152 (8%), Positives = 32/152 (21%), Gaps = 13/152 (8%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA-------LSVLLLLLCTPY 234 L+ R I + + + A WL ++ L Sbjct: 235 LWIGYQRDITKRKLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYS 294 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + I + + I + V + + L ++ + + + + Sbjct: 295 REELIGMSIPELDAIDNSELVR------ARIEEIIRNGGYLEFDTMHKRKDGSLWPVHIS 348 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + L A Sbjct: 349 TTYSSVSGGRCFVFSTDLTEQKRAEESLRLAA 380 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 103/430 (23%), Positives = 177/430 (41%), Gaps = 16/430 (3%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + + QA D LT LPN ++ +Q L +D + ++ Sbjct: 424 QKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVNDT 483 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G + ++ + L ++ + + + G E L+ + + + + + + Sbjct: 484 LGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKLS 543 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 +N L + + E Q LL ++ E + Sbjct: 544 IPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRN-NFQVFAEEMHR 602 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 + Q+ L +R AL + + LLY QP + G + ++ G + PD+F+P Sbjct: 603 EALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIP 662 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L A VL++ + + R +VNL Q + I++ + Sbjct: 663 LAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLET 722 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 I PQ + LEITE A + E ++ +++L + G I IDDFGTGY++ LK + Sbjct: 723 TEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNT 782 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DIV N+ DA I ++I L++ L VVAE VET QQ + L + QGY Sbjct: 783 LKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGY 842 Query: 720 LIGRPQPLAD 729 P P + Sbjct: 843 YFCPPVPAIE 852 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 97/560 (17%), Positives = 202/560 (36%), Gaps = 23/560 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R + F + S E + + + ++ + G V Sbjct: 835 RDVTQRRFIE---HEARTASEVFENSSEAIMMTTSTGLISRVNRAFTHLTGFDGQHVIGV 891 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-- 305 + ++ A+ +++ ++ + L + Sbjct: 892 NPKQFIAKDVSHQTMQDIRDALLVDGYWQGELDYINRKGEKHPSWTGVTALKDEMGQIQS 951 Query: 306 -LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-----EAGKSFCCLRIDN 359 + + + R A DPLT LPN + +A ++ E+ + + +D Sbjct: 952 HIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQMHEALDRLMAKEESQLALLFIDLDR 1011 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH--- 416 + ++ G ++ + L + + ++ G E ++++ + Sbjct: 1012 FKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLVSRIGGDEFTVIMATLPETEQAIQTII 1071 Query: 417 -MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + L + + N + LL + A Sbjct: 1072 DVSERILHQMMQPFFIEDRQLYLSASVGIALYPENALSGTDLLRNADTAMYHAKAMGKN- 1130 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYD 529 E ++ + +++ L N + AL + + L Q + + G + +L + D Sbjct: 1131 NFQFYAEEMNEKAMERLELENNLHLALQRDEFELTFQAQWDIKHNCICGVETLLRWHRPD 1190 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKN 588 G++ PDKF+P+I + L VL + + +VNL Sbjct: 1191 IGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIMDWQEAGYVIPKLAVNLSARQFKDAQ 1250 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + RI R+ + P+ + LE+TE + + ++ + + K GF ++IDDFGTGY++ Sbjct: 1251 MLDRICRIVDETGVDPELIELELTESILMDDIDRTLAVLNEARKMGFGLSIDDFGTGYSS 1310 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK+ +KID F++++ N D I R+I +A L V+AE VE + Q+ L Sbjct: 1311 LSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTIVAMANNLGLGVIAEGVENESQRQFL 1370 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 +G +QGY+ P P Sbjct: 1371 KTIGCYQVQGYMYSHPVPAD 1390 >UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5G1_9CHRO Length = 997 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 117/594 (19%), Positives = 213/594 (35%), Gaps = 36/594 (6%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 +++ +L+ +L + + + + A +R A + Sbjct: 402 IIAATVGILLTGVLTNVVVTLTHRRTQLEQQIQLRTAELKKMAERLRLALEAANQGIFDF 461 Query: 229 LLCTPYEN-----DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNY 277 L T I Y F F+ + + A+ + N Sbjct: 462 DLLTNQATVSPEYALILDYNPEKFQETFSSLIERTHEDDREKIMAMYEAYLNGKISQHNL 521 Query: 278 NQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + + ++ + LL + + A DPLT Sbjct: 522 EFRQKTATGNWKWIMSVGKIVQWDAQHQPIRLLGTHTDITGHKQSEAKIKHLAYYDPLTS 581 Query: 334 LPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 L N R + E + + +D + ++ G H + + + L Sbjct: 582 LANRRLFLEHLESALSVARSKGEYGAILFIDLDQFKTLNDARGHDAGDHLLIEVAKRLKQ 641 Query: 386 LMQENEKLYQLPGSELLLVLSGPETE---------GRLQHMVNILNSRQIHWNNTGLDMG 436 +++++ + +L G E +++L E + + S + + + Sbjct: 642 SVRKSDTVARLGGDEFVVLLPQLHHEPTTAAHLSREVAEKVRQK-LSTPFVFQHEEFIIS 700 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F ET+ LL + Q + + + Q + L +R Sbjct: 701 ASIGITIFPKANETVSDLLKEADTAMYQVKEKGRN-GVCFFDTTMLVQVESRFTLEKELR 759 Query: 497 TALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ + LY QP + G + +L G++ P F+PL L Sbjct: 760 RALERQEFRLYLQPQVDINERIVGAEVLLRWQHPSLGLVPPCAFIPLAEDTGLIISIGEW 819 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 VL+ +LA SVN+ P L Q + ++ + ++ LEITE Sbjct: 820 VLQQACFFLADFQAKNPDFHLSVNISPRQLSQAEFVSNLKQIINITAVQANSLTLEITER 879 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + + + +L G +++DDFGTGY++ LKRL + IKID FV+DI + Sbjct: 880 LIIQDVDYVSSVMSKLQDLGINLSLDDFGTGYSSLAYLKRLPLNEIKIDKNFVQDIGNYS 939 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A ++ +I +A+ +L+VVAE VET +Q L K G + QGYL G+PQPL Sbjct: 940 NHAPLIEAILAVARHFNLTVVAEGVETIEQANFLKKRGCHFYQGYLYGKPQPLE 993 >UniRef50_B3E9P2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9P2_GEOLS Length = 805 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 123/749 (16%), Positives = 257/749 (34%), Gaps = 33/749 (4%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR 62 V +L+ ++ LA VL+ F++P + + L + + +F Sbjct: 43 VRVSLMVKLRWAMLAALFCYVLL-AELFLAPDIDLP--IFHIEQWSLSLKATAIFFAVAF 99 Query: 63 GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTF---VVLCACAILRWQLGTRWRYGLTSR 119 +V + C ++ +L L + + + V+ + + + Sbjct: 100 PLVSLPCSVWRNCRLVIYLQVLLDLLFVTAAIHWSGGVVSWLWPAYLLISLESAFLFEKK 159 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 R W + + + F + L+ L+ A + Sbjct: 160 ----REVWGIGMIGAALYGVLLAAEQLDFIATVRMPFMEEESPSILFELLMWLWVAGVNT 215 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + F+ M Q + + A + + LL L + Sbjct: 216 VVSFFGAFLMDKIRSDHQKVQQSQEALTGFIATAHDLIFCCRQDGTLLYLNQVGQDMIGP 275 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-VETEYSLAFILA-- 296 + + ++ L V L L+ Sbjct: 276 LEGEGGDISLFNLTDEEGKGLLARQFEKVTRRIDAGHFEMRLLSPAVGRILDLEVSLSTC 335 Query: 297 --VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA------ 348 + + + R A D LT LPN L +Q Sbjct: 336 CNDVPDQV--IWGVCHDITERNLAQRELIKLAHHDVLTGLPNRILLHDRLQQARAFAHRM 393 Query: 349 --GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + L +D + ++ G + +R I + L +E + + ++ G E ++++ Sbjct: 394 NSRFALLFLDMDRFKIINDTLGHAVGDDLLRMIAQRLKACFRETDTVARIGGDEFVVLML 453 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + L ++ L + + +++ ++ ++ + Sbjct: 454 NVTDRTDICTLNDKLLQELAQPFMIRGHELFVTTSGGVCTYPDDEDDVEIMMQKADIAMY 513 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 + A + + + ++++ + N++R LD+G+ LY QP + + Sbjct: 514 HAKALGRN-NIQFYNDGMDQNSSRRFTIANSMRRGLDRGEFRLYYQPKLDVSSDCIVATE 572 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNL 579 ++ + G++ P +F+ L + L VL + + +G R +VNL Sbjct: 573 ALVRWQHPELGLLAPTEFIQLAEESGLIVELGEWVLREACRQNMVWRQEGMRGLRVAVNL 632 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L + + ++ + + + EITE N + ++ + ++ G I+I Sbjct: 633 SGYQLQHSRLVETVRKVLDETGMPGELLEFEITESVIMQNPDYAVEVLNEITNLGIHISI 692 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR + +KID FV+D+ NT DA I +I + + +L V+AE V Sbjct: 693 DDFGTGYSSLAHLKRFSVNTLKIDKSFVRDVENNTTDAAIASAIIAMGSSLNLKVIAEGV 752 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET+QQ L +QG+LI RP P Sbjct: 753 ETEQQMDFLRDNNCDQVQGFLISRPLPAD 781 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 103/569 (18%), Positives = 194/569 (34%), Gaps = 30/569 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + + R I + R+ ++ E +L I GY Sbjct: 184 YRGIDRDITVRQQLEEWLRQS---AMVYENMWEGAVITDPAG---TILDVNPAFSRITGY 237 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + + ++ + + Y ++ + Sbjct: 238 AKDEVIGKNPRILKSDRHEQAFYQHMWRELIEKGQWRGEIWNRRKNGEVYPEWLSISGVS 297 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + + + + A DPLT LPN L + Sbjct: 298 DARGQTSYYVGVFTDLSQLKQSEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAERHQT 357 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + +D ++ + + + L ++ ++ L + G E +L+ Sbjct: 358 KVGVYFIDLDQFRVVNESLSYQAGDQLLVMVSKRFLSCLRVDDTLARPGGDEFVLIQEAL 417 Query: 409 ETEGRLQHMVNILNS---RQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 L + + + + +G F G+ T LL Sbjct: 418 ADPQEATETARELLASLDQPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAEAAMYH 477 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE----GEGYD 520 + + E ++ ++ + +R A++ +LLLY QP G + Sbjct: 478 AKENGRNR-FSFYAEQMNADALARLQMEMALRQAVENRELLLYYQPQWQLADSPSVIGAE 536 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNL 579 ++ +G ++ PD+F+PL + L V++ + L K R +VN+ Sbjct: 537 ALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRVAVNV 596 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 N+A + + +++ I LE+TE E + + + G IA+ Sbjct: 597 SARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVGIAL 656 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L R ++KID FV+D+ + A+I SI LA L VVAE V Sbjct: 657 DDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGV 716 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET++Q+A L G QG+L P P Sbjct: 717 ETEEQRAYLQSRGCDLAQGFLFSPPLPAE 745 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/204 (10%), Positives = 47/204 (23%), Gaps = 10/204 (4%) Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY 185 L L F D + ++ D +++ + F + ++F+ Sbjct: 9 IRYALRLAAVYALFGLLWIFFSDRLVLAISW--DQESLTAMQTYKGWFYVAVTAILVFFL 66 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + R + +R S T +S + L ++ I Sbjct: 67 VLRAEYRFRRTEERFRNLTETSNDWIWEVDTSGSYTYVSPQVKTLLGYRPDEVIGRTPFD 126 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 ++R F ++ + L L L Sbjct: 127 FMPSGE---AERVRDRFAAISAEQEAIINLVNT--NLHRQGRRVILETSGVPFYDQHGTW 181 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQA 326 + R + L A Sbjct: 182 QGYRGIDRDITVRQQLEEWLRQSA 205 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 96/561 (17%), Positives = 190/561 (33%), Gaps = 27/561 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL--AALSVLLLLLCTPYENDFIAGYLVPV 246 + A+ + A + T ++ D + G + Sbjct: 389 DVTERIEAENRLNQAAAVFRSTGEGVAITDQNGTIVDVNEAFTKITGFDRDEVIGKNTRI 448 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFS 302 + N+ + T Y ++ + Sbjct: 449 L-----QSGKHDIAFYENMWEQIQKHGHWRGEVWNRAKSGTIYPEILTISAIDFKKGQQP 503 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + + + R A D LT LPN + ++ + Sbjct: 504 SGYVGVFADITSLKETEARLDHLAHYDALTELPNRLLFRERLIHSLLMSERKKTKVAVLF 563 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + + I L +++ + + ++ G E L+L + + Sbjct: 564 LDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGDTVGRISGDEFCLILEDIQDVTDV 623 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 +V + S + I N+ L + N LL ++ Sbjct: 624 VPIVEKILSVFSQTIQINSHMLQISASIGVAISPDNSNDADALLSFSDSAMYEAKEAGRN 683 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 ++ Q + + + +R AL+Q + QP + G + ++ Sbjct: 684 -TYKFYTAEMTQQALEHSFVQSALRDALEQSQFFVTYQPQLRIKDYSMVGVEALVRWQHP 742 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + G++ PD F+P+ L +L + + ++ R VN+ L + Sbjct: 743 ERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQWLNEQVNFGRIYVNVSATQLHDE 802 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + +I K + + LE+TE + + ++ + + G +AIDDFGTGY+ Sbjct: 803 SFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAINVLSSFKEIGIELAIDDFGTGYS 862 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+L D +KID F++DI + D I ++ + KA +L V+AE VE+Q Q Sbjct: 863 SLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVIAMGKALNLEVIAEGVESQIQADF 922 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L +QGYL P Sbjct: 923 LLDKECTEVQGYLYAHPLTAD 943 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 104/578 (17%), Positives = 207/578 (35%), Gaps = 31/578 (5%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLLLLC-----TP 233 L + + + + ++ + + R + + ++++ Sbjct: 226 LEATVAQRTAALKTSNEQLKQQMIEREQAQHRLRLTAGVFENTSEAIIITDAANRVMEVN 285 Query: 234 YENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 I GY F + + + + Y Sbjct: 286 PAFVRITGYPADEVIGRDPGFMKSHRHTHEFYAEMWKKIWQTGQWQGEIWDRRHNGEIYP 345 Query: 291 LAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 + + L+ + R + R A D LT LPN + Sbjct: 346 KWLTINAVYDERGHLVNCIGIFSDISRLKATEERLEQLAFFDCLTKLPNRAHFQSRLDHA 405 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 ++ + +D+ + ++ G + + + ++E + + ++ G Sbjct: 406 LTAANRRQNKVGLIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDTVARMGGD 465 Query: 400 ELLLVLSGPETEGRL-QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++L+ ++ ++ + I + L +G + + L+ Sbjct: 466 EFTIILADLTDTAKVMTNVALTILESFTHPIVLEDKKLFIGCSLGMAIYPDDSGNAALLI 525 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK- 514 ++ ++ Q ++ L + +R A+D LY QP + Sbjct: 526 KHADTAMYRAKESGRNR-YSFYTAEMNAQAQSRISLESELRYAIDHKAFELYYQPKVDAH 584 Query: 515 --EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK- 571 E G++ +L + G+++P++F+P+ + L A QV+E + L Sbjct: 585 SSEIVGFEALLRWIHPTEGVISPNQFIPIAEESGLIAAIGNQVVEMACQGLQRINRCTPK 644 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 ++NL L Q N+ + Y I + + LE+TE E S ++ LH Sbjct: 645 PLPVAINLSVRQLRQDNLVNYFSQTLANYGIEAEQLELEVTESFLAKPIEKSAALLQALH 704 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G++IAIDDFGTGY++ LK +KID FV ++ N IV++I +A A Sbjct: 705 QLGYKIAIDDFGTGYSSLSYLKNFPIHTLKIDRSFVMEVAHNQESRTIVQAIISMAHALG 764 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +VAE VET Q +L LG +QG+ RP PL + Sbjct: 765 YDLVAEGVETAAQVNVLQGLGCGIMQGFHYARPAPLHE 802 >UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Methylobacterium RepID=B1ZFY0_METPB Length = 833 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 144/772 (18%), Positives = 274/772 (35%), Gaps = 59/772 (7%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW 61 + + +++L F + ++ + ++ ++ + + L L I+ Sbjct: 50 LIAAAAVFGCSVWSLHFVAMLAFRPSAQ--AAYGLLPTAAS--IGIAVTGALIALLIWCR 105 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 P+ + V + ++L A + LG +T+ Sbjct: 106 ADHHPLKLAAAGMVMAAAIAGMHYAGVGAMAANSLLLFDGAYVHASLGLCAILAVTALAR 165 Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 L LG + + ++ + G F ++ + + ++ + + Sbjct: 166 AGDLTGLGRRIEVSLWLALAICGLHFTGMTALTVAPAAP-----LEEGGAVLGSTQLGLA 220 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + ++ + A ++ R + + + R L LA +L+ E + Sbjct: 221 VGLVSLVVLAAGLAALLMQRHLMRRRMDELSRMRLLGNLAHEVLLIHRDGRVVEINQAGL 280 Query: 242 YLVP------VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 L V + L L + L + Sbjct: 281 RLFETTLQEIVGRPLLDLFADADAPALLRRSRC-RPEELRPEEFEIRTAAGLAVPVELSC 339 Query: 296 AVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + R + R AL D LT LPN LE+ E Sbjct: 340 RAIEYLGRPATAVAL-RDLSQRRRDEARIRHLALHDALTDLPNRTLLEERLSLALETAAE 398 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 A + L +D + ++ +G + + +L ++ + L ++ G E ++VL Sbjct: 399 NGASVALVYLDLDRFKPVNDFHGHAAGDALLVQAAKRMLAELRPTDTLARIGGDEFVIVL 458 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNT----------------------GLDMGYGAA 440 + T ++ L + R H +++G A Sbjct: 459 AHTRTLAQIAETAARLVAALGRPFHLEGQNEGEGKSEGKGEGTSEGKSEGLRIEIGASAG 518 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + T + L + + E + Q + + + + A+ Sbjct: 519 IAVYPSDGSTAETLKRAADTALYRVKDEGRG-TVRFFEAAMDEQLQARRRIEHELSGAIP 577 Query: 501 QGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 +G+L LY QPI N E ++ ++ + G + P F+PL Q + R VL+ Sbjct: 578 RGELQLYYQPIVNGRTGEIETFEALIRWHHPERGCVPPADFIPLAEQTDQIGRIGAWVLD 637 Query: 558 SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + A P R SVN+ P Q A + + RY + P ++LEITE Sbjct: 638 TACAAAAAWP---HPWRVSVNVSPKQFRQPGFAAGVAAVLGRYGLPPGRLVLEITEGVFI 694 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 +A ++ + L G R+A+DDFGTGY++ L+R + D IK+D FV+ + + Sbjct: 695 QDATMAVEVLTALRTLGVRLALDDFGTGYSSLSYLQRFKFDKIKVDQSFVRRLGRHADTL 754 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+IT L L V E VETQ+Q A+L +LG +QGYL RP P+ + Sbjct: 755 TIVRAITHLGHNLGLQVTVEGVETQEQLAMLRELGCDQMQGYLFARPAPMTE 806 >UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDT9_TOLAT Length = 753 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 127/724 (17%), Positives = 244/724 (33%), Gaps = 77/724 (10%) Query: 44 LAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAI 103 + + +LS+ +FG ++ + + L +G T V+ + Sbjct: 59 VIFDARSAILSMAGLFG----GALVATIAGVIAGVYRLWLGGATYGVGILTIVISVILGL 114 Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 R + L+ + + ++ L+ S F FP+ + +F Sbjct: 115 AYRAAHQRGWMSKGPIQL--------LLFGVLLHTAILLLFSLFPFPI-LHSFMQQIALP 165 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 +TV + + ML + + I++ + E R + Sbjct: 166 YTV--------SFALATMLLGLMLQDIINRT-------KTEQALQDSESRLRAIVQAIPD 210 Query: 224 SVLLLLLCTPYENDFIAG----YLVPVFFIIFTLGVGK----LRYPFLNLTWAVSTLCLL 275 ++++ Y + Y + I L + ++ Sbjct: 211 LMVIIDEDGHYLDALPTTNNQFYPRALALIGSNLHSELPPETADRILATVRDSLRLQQTQ 270 Query: 276 NYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + + L ++ ++++ R + A DPLT Sbjct: 271 TIEYERDFKMGQRL-VEGRAQPLGYTVNNKQVVIFLARDITDRKIKEDEIAWLAFYDPLT 329 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN R L+ + + +DN + ++ G ++ + L Sbjct: 330 GLPNRRLLQDRLHQAMAGSKRSGQRAALLFIDLDNFKTLNDTLGHDKGDLLLQQVATRLF 389 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQH-----MVNILN---SRQIHWNNTGLDMG 436 ++E + + +L G E +++L L + + + + Sbjct: 390 ECVRECDTVARLGGDEFVVMLEELNHSEELAAAQSKMVGEKILVKLCQPYLIAGYEHNSS 449 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F +QE+ L+ + Q+ + L + + T + L N +R Sbjct: 450 ASIGITLFLAHQESSDELMKRADIAMYQAKSAGRN-TLRFFDNKMQAIVTSRAELENDLR 508 Query: 497 TALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 L Q LLL+ QP + G + ++ G+++P F+PL + L Sbjct: 509 EGLRQQQLLLHYQPQVDVHGRIIGAEALVRWQHPSRGMVSPAHFIPLAEESGLILSLGDW 568 Query: 555 VLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + L +VN+ + Q + +++ + P Sbjct: 569 VLNEACRQLRRWAAQPAMAHLTMAVNISARQIHQPDFVDQVLAAIHTAGVQPYH------ 622 Query: 613 EEQAFS--------NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + E + + L G ++DDFGTGY++ LKRL D +KID Sbjct: 623 --LKLELTESLLLEDTEEIILKMTALKACGVGFSLDDFGTGYSSLAYLKRLPLDQLKIDK 680 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV D++T+ DA I SI LA++ L+V+AE VET+ Q+ L LG QGYL G P Sbjct: 681 SFVHDLLTDPNDAAIASSIITLAQSLGLNVIAEGVETEAQRQRLEALGCYTYQGYLFGHP 740 Query: 725 QPLA 728 P Sbjct: 741 VPAD 744 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 116/571 (20%), Positives = 214/571 (37%), Gaps = 26/571 (4%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL---SWLAALSVLLL-----LLCTP 233 +F+ + ++ +W R I ++ R ++ +L+ ++ Sbjct: 272 VFWVGVSLALALATLAYVWLRTIQQLRRRDARMRLATSVFASSSEGILIANPNDEVIGIN 331 Query: 234 YENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + GY V + F + ++++S + + Sbjct: 332 PAVTALTGYSVQELLGRPVSFLAPEQTVAESRRQASFSISEKGVWQGEALIKHKQGYTFP 391 Query: 291 LAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL----EQA 343 +A + + C + + R H A TD LT LPN +L E+ Sbjct: 392 VALTITTVTGEDGRVECYINTFSDISERKANEARIHDLAHTDTLTGLPNRMSLYSGLEER 451 Query: 344 PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 L +DN + ++ G + + + R L+ + E + +L G E ++ Sbjct: 452 LANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEFVI 511 Query: 404 VLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 VL P+ + + + ++ L G + LL + Sbjct: 512 VLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDT 571 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 + + E + Q +++ + N +R A+ + + L+ QP + Sbjct: 572 AMYAAKSSGKN-NFKFFTEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRII 630 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 G + ++ + G++ P+KF+ + + NL VL + ++ S Sbjct: 631 GMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCIS 690 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ L + + I L + I P + LEITE + E ++ +++L G Sbjct: 691 VNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVA 750 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ LK L +KID FVKDI T+ DA I + LA+ L +VA Sbjct: 751 LAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVA 810 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 E VET+ Q L G QGY +P P Sbjct: 811 EGVETEAQLEYLRAQGCDSAQGYYFSKPLPA 841 >UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=2 Tax=Cyanobacteria RepID=B0C4Z3_ACAM1 Length = 754 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 114/582 (19%), Positives = 212/582 (36%), Gaps = 27/582 (4%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 L + L I Q + + W AA+ LL Sbjct: 137 LIGQNRTLRAMNAQLQGEIDERQLVQQKLQESETRLESILNSLDDVVWSAAV-EEFQLLY 195 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKL----RYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + + GY V F L + + R+ ++ + LN L+ Sbjct: 196 LNPAAEAVHGYPVSSFLSNPDLWLEVVHPADRHQMIHFFDQLLVAGSLNIEYRILRPDGE 255 Query: 288 EYSL---AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 L ++ L ++ + + A D LT LPN + + Sbjct: 256 IRWLKNRGHVITGDQGRPHRLDGIIYDITEQKRAQAQLIHDAFHDELTGLPNRNLMMERI 315 Query: 345 -----EQEA----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 Q + + +D + ++ G ++ + +I L ++ ++ + + Sbjct: 316 SQSLKRQHRTSDYQFALLFIDLDRFKIINDSLGHIVGDQLLVAIAHLLENCVRTSDTVAR 375 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E ++L G + H+ + + G + Sbjct: 376 LGGDEFTILLDGIQGIEDAIHVAERILETLKSPFQVGEHSVFTGSSIGIAYNSVQYDDPT 435 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL ++ + + QT + L +R+A+D+ + +LY QPI Sbjct: 436 LLLRDADIAMYRAKSLGKG-CFVVFSPEMHAQTLSLLKLERDLRSAVDRQEFVLYYQPII 494 Query: 513 NKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + + + ++ D G++ P +F+PL + L VL+ + L + Sbjct: 495 DLQSGDLTDVEVLVRWQHPDRGLVMPSEFIPLAEETGLIVEIGQWVLQEACQTLRDYQQQ 554 Query: 570 KK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 +FSVNL L N + R+ + + + + LE+TE S+ E + Sbjct: 555 FASATELKFSVNLSSEQLQDPNFIQTVDRVLSQSGLDGRYLKLELTESMLMSHEEKHIKT 614 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 ++QL I++DDFGTGY++ L R D +KID FV +++ DA IV +I L Sbjct: 615 LQQLRDRSITISLDDFGTGYSSLSYLYRFPLDTLKIDQSFVSRMISEPKDAEIVNTIISL 674 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A+ ++ V+AE +ET+++ L KLG + QGY P Sbjct: 675 ARTLNMDVIAEGIETEEEVLHLKKLGCERGQGYWFSPPMSQE 716 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 115/579 (19%), Positives = 218/579 (37%), Gaps = 25/579 (4%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT-LSWLAALSVLLL----- 228 VL+ + L + ++ R + +A +L+L Sbjct: 203 GVLVDMEVHSRLFELNGRKAVIGVVMDISERLLADTNLRLAAKVFENSAEGILILDAGAR 262 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 ++ I GY + + + A++ + Sbjct: 263 IIAVNDAFTRITGYAEEEALGKASRIFSAEQQARAAMQQALADCGHWQGEMLDRRKGGQW 322 Query: 289 YSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 Y ++ L + + + + R A DPLT LPN L + + Sbjct: 323 YPAELSISALRDEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPLTRLPNRSRLTASLD 382 Query: 346 QEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + + +D + ++ +G + + I L ++ E L +L Sbjct: 383 EALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLG 442 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E L++SG ++ +L M + + + + + + + F + + L Sbjct: 443 GDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTL 502 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L ++ + ++ QT +++LL N +R AL++ + L+ QP + Sbjct: 503 LKNADVAMYRAKEAGKN-TYQFFDIGMNTQTFERLLLENGLRMALERHEFELHYQPQLSA 561 Query: 515 ---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + +L G++ P +F+ L + L VL + LA Sbjct: 562 GERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGL 621 Query: 572 GP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R +VNL P Q ++ ++ + ++ + LEITE + ++ + +L Sbjct: 622 RVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSEL 681 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G ++IDDFGTGY++ LKR D +KID FV+ + + +A I +I +AK Sbjct: 682 KSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKL 741 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE VE+++Q A L G LQGY GRP P + Sbjct: 742 KFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGE 780 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 115/740 (15%), Positives = 235/740 (31%), Gaps = 41/740 (5%) Query: 29 RFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVP----VLCGMFCTNLWNFHLSFL 84 R P I + +L + + L G P + L +L Sbjct: 188 RRFEPFDWIIGAGEYLYQIEADLQAEALKRIGAISFHPDGVIGVTTADGRILVEPNLLAQ 247 Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRY-----GLTSRYVWQRLFWLGLVTPIGIKCS 139 +A G + A R + QR + Sbjct: 248 PSARHAGLPEQPAVPWTAAAREVIQRNGGGRLQFSLPGPDGRAQRRLGYAVEHAGWQWYL 307 Query: 140 MYLVGSFFDFPL------KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + VG ++ ++ ++ AV++ ++ R S Sbjct: 308 VASVGLDGLDAALEHERDEVRNTARHRLEFTLLLLAVASTVAVIVSLAFSSWIGRRFASY 367 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF 248 + + + A + ++++L + +AG Sbjct: 368 RGEIAQRNAALEAKNRELQLAARVFECGNEAMMVLDADHRFITVNSACAQLAGLDAAALR 427 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 L + + ++ + + ++ ++ + Sbjct: 428 GRPAAQLLNDHDGAGWERIARELAEQGAWSGEVTVRREDGPTLPAQLSVSAVLNSAGGAT 487 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 + + + A D LT LPN L + + Sbjct: 488 HYVGALTDMSAHKQTEALLRHMAEYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFI 547 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + +R + L L+ + + + G E +++L+ Sbjct: 548 DLDRFKNVNDSLGHSVGDALLRQAAKRLASLLHGGDTIARPGGDEFVMLLAEITDRAVAA 607 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + L + + LL + Sbjct: 608 NRAAQIIDAFSTPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRN- 666 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + +S + +++ L N +R A+ + + ++ QP + G + ++ + Sbjct: 667 TYRFFTDEMSLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPE 726 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G++ P++F+PL L +VLE+ +VN P+ + N Sbjct: 727 RGLIAPERFIPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGN 786 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 A + + + + + +E+TE ++A + L G R+AIDDFGTGY++ Sbjct: 787 FAETVAEVLAETGLPARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSS 846 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR Q D +KID F+ D+ + DA I +I +A++ +SV+AE VET Q+ L Sbjct: 847 LAYLKRFQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFL 906 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 G QGYL P P+ Sbjct: 907 VDQGCAEGQGYLFSPPVPVE 926 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 97/564 (17%), Positives = 193/564 (34%), Gaps = 24/564 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-LLLLCTPYENDFIAGYLVP 245 R + S + K ++ ++ I GY Sbjct: 930 VRAVCSQSTDVTMKHHAEEQLRLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQ 989 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F + + + ++ + Y + + + Sbjct: 990 EVIGKNPRFLQSGKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDEN 1049 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + RR A D LT +PN L Q+ + Sbjct: 1050 GSVVNYVAIFSDISAIKSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLA 1109 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G + ++ L +++++ L +L G E + VL+ + Sbjct: 1110 VLFIDLDNFKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDV-SL 1168 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 ++ + + N+ L + F + + LL ++ Sbjct: 1169 EKVNSVAARIVDFLGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKER 1228 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + + +++ L +R AL+ + QP + E G + +L Sbjct: 1229 GRNQ-YQFFADEMKVIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRW 1287 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 G ++P F+P+ L V +L+ +A R ++N+ L Sbjct: 1288 RDPTLGEVSPAHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQL 1347 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 A ++ IS + + +E+TE + + G +++IDDFGT Sbjct: 1348 RDAGFAAKVGSWLDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGT 1407 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK+L +KID FV I D I ++I D+++A + VVAE VE+++Q Sbjct: 1408 GYSSLSYLKKLPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQ 1467 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 +L + G +QGYL RP Sbjct: 1468 LGVLKEEGCDMVQGYLFHRPLSPE 1491 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 97/564 (17%), Positives = 201/564 (35%), Gaps = 26/564 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLV 244 +V + + TL VLL ++ E + Y Sbjct: 354 VVMVFHDVSKRYALLDELGAARAQFETLFEQLPEGVLLFDESLAVITHNREAANLLEYAS 413 Query: 245 PVFFII--FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE--YSLAFILAVLIS 300 ++ + + + + N+ + ++ + L + Sbjct: 414 DALLLLQVSDIEAMDDQNAIAARKEKLQLTGIDNFESRYRTRSGRLMDVDVSVQVVQLPN 473 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + + R + + + A D LT LPN R L+ ++A + Sbjct: 474 GRIAFQTLFRDITEQKQTSAQIEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLAL 533 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D+ + ++ G ++ + L ++ ++ L ++ G E +L+L+G Sbjct: 534 MYLDLDHFKDVNDSLGHGAGDVLLQIVAERLQGCVRADDTLARMGGDEFVLLLNGVNGAD 593 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + S+ + N L + + LL Q+ Sbjct: 594 DVASIAGKIIHELSQPMRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQG 653 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + + Q+ ++V L +R AL++ + LY QP + G + ++ Sbjct: 654 RA-TYRFYTQALHDQSVERVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEALIRWN 712 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL-L 585 G ++P +F+P+ Q L V++ + S N+ Sbjct: 713 HPGMGQVSPARFIPIAEQSGLIIDIGNWVMKQACHQAKRWHDQGWDIKVSFNVSARQFMR 772 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + + + P + +E+TE + + + ++ G ++A+DDFGTG Sbjct: 773 SGELMQSLRDALAESGVDPTRMEVELTESLLL-DPQGMGEILHEIRALGIQLALDDFGTG 831 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L+R I+KID FV N DA +V++I +A +S++AE +ET Q+ Sbjct: 832 YSSLSYLRRFPISILKIDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQR 891 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 +L G + QGY P P + Sbjct: 892 DMLETQGCEVGQGYHYSCPVPATE 915 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 96/555 (17%), Positives = 201/555 (36%), Gaps = 23/555 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYENDFIAGYLVP 245 R I + A+ + A + L T Y D G Sbjct: 243 RDISKENAAKQGLFQAAAVFKNSGEGILISDEKGLIRDVNAAFSQITGYSRDEAIGQATS 302 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + + A+ + + ++ + + Sbjct: 303 LLR-----SGRHDAEFYKKMWHALKETGTWRGEIWNRRKSGAVFPELLTISKIDGQNSGF 357 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRI 357 + + + + + A DPLT LPN + + +Q + L I Sbjct: 358 VAIFTDITQLKETEEQLQKLAHYDPLTELPNRYLINERLQQSIRRAQRRSERLAVFFLDI 417 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + L L+++++ + ++ G E L++L + ++ Sbjct: 418 DSFKNINDSLGHLAGDKLLAMTANRLRELLRDDDTVGRIGGDEFLMLLEDINSPDVATNI 477 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + + + + +T + L+ + Sbjct: 478 AEKIIGALRKPTILEGRSVSVSASVGISIYPDDGQTAETLMSNADAAMYSAKEQGRN-TF 536 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 E ++ + VL+ + +R A + + L QP + G + +L G Sbjct: 537 RFYSENLTRAAFQNVLIDSALREAKSRNEFRLAFQPQIDIVTNSLLGLEVLLRWHHPTLG 596 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIA 590 ++P +F+P + L VLE + R +VN+ ++ Sbjct: 597 TVSPAQFIPQAERTGLIRDIGQWVLEQACLQGNKWLAEGLPFGRLAVNVSAPQFRAEDFV 656 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ ++ + + P + LE+TE + E + N+++L G + AIDDFGTGY++ Sbjct: 657 DQVRQVLEYANFPPNRLELELTESVLVQDTEQLIGNMDELRAMGIQFAIDDFGTGYSSLS 716 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK++ D +K+D FV +I T+ D +I ++ L +A L V+AE +E ++Q L Sbjct: 717 YLKKMPIDRLKLDKSFVDNISTDDNDRIIAEAVVALGQAMGLEVIAEGIEYEEQARALRD 776 Query: 711 LGVQYLQGYLIGRPQ 725 +G QG+L G P Sbjct: 777 IGCTQFQGFLYGMPM 791 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 102/594 (17%), Positives = 211/594 (35%), Gaps = 34/594 (5%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI-------LWRRDIAPSLGKEKRAF 215 + + + + + + R I A++ L + + S+ Sbjct: 104 VRWIHNRVCAIADETGTVIRIDGIARDITQRKQAEVQLCPENDLLQGIMQTSIAAITVVD 163 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY---PFLNLTWAVSTL 272 T + + + +++ + + I G PF + + Sbjct: 164 TQGNIIFANARSQQVLGLTQSELVERRYNCPTWQITDFQGGPFPEEQLPFQQVMVTGQPV 223 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + + + T L+ A L +++ V + + + AL D Sbjct: 224 FDVQHAIEW--ADGTRKYLSVNGAPLKDADGVITHIVFSVTDISHHKHVEEQLCHDALHD 281 Query: 330 PLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 LT LPN + + L +D + ++ G + + + Sbjct: 282 NLTRLPNRTLFMERVNHAIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATA 341 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 R L ++ + + L G E ++L + + + + NN + Sbjct: 342 RQLEKCVRTTDTVAHLSGDEFTILLEDIKDIKDATRVAERIQATLKAPFNLNNHEVFTSA 401 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 E + +L ++ + ++++ + + + L N +R Sbjct: 402 SIGIALSSTGYERSEDILRDADIAMYRAKELGKAR-HEIFDKIMHARALELLRLENDLRR 460 Query: 498 ALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ + +Y QPI G++ ++ + G+++P +F+P+ L Sbjct: 461 ALERQEFEVYYQPITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEW 520 Query: 555 VLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + L + SVNL + + ++ +I + + + LEI Sbjct: 521 VLHEACRQLRMWHTQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEI 580 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE NAE+ + QL ++++DDFGTGY++ L R + +KID FV + Sbjct: 581 TESILMENAETVTKMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMN 640 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + I+R+I LA + + V+AE VET +Q L L + QGYL +P Sbjct: 641 PKNRNTEIIRTIITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPL 694 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 6/101 (5%), Positives = 25/101 (24%), Gaps = 7/101 (6%) Query: 229 LLCTPYENDFIAGYLVPVFF----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 LL + I G + + + + R ++ ++ Sbjct: 41 LLYINQAAETILGRTLCELYDQPTLWELMIHPDDRQRVQQQFQSLGESGNQAVEYRIVRP 100 Query: 285 VETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRW 322 + + + + ++ + R + + + Sbjct: 101 DGEVRWIHNRVCAIADETGTVIRIDGIARDITQRKQAEVQL 141 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 99/430 (23%), Positives = 177/430 (41%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + + QA D LT LPN S L +D + ++ Sbjct: 436 QRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTIND 495 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + ++++ L ++E + + + G E ++L + + S Sbjct: 496 TLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSAL 555 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + H N L + +D + + L+ Q+ +S Sbjct: 556 EQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRN-TYQFFCSGLS 614 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 +++ L ++R AL++ + LLY QP N + G + +L + G++ P F+ Sbjct: 615 NGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFM 674 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + L VL + T +VNL Q ++ G I R+ Sbjct: 675 SVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPDLTGMIARILD 734 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + PQ + LEITE A + E + +++L G +I++DDFGTGY++ L++ + Sbjct: 735 ETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLN 794 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+ N+ DA IV ++ LA+ +L+VVAE VE +Q L L + QG Sbjct: 795 TLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQG 854 Query: 719 YLIGRPQPLA 728 Y+ RP Sbjct: 855 YIFNRPLEAD 864 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 102/551 (18%), Positives = 211/551 (38%), Gaps = 23/551 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSV-LLLLLCTPYENDFIAGYLVPVFF---IIFTLGVG 256 R L ++ T S ++ ++ + I G++ T Sbjct: 377 RETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPKITQSGR 436 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + + + + + + ++ + + + + Sbjct: 437 HDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVGVFNDIS 496 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 R + ++ DPLT LPN S + +D + ++ Sbjct: 497 RQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLLLVDLDRFKIIND 556 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + + + L+ +++++ + +L G E ++L G E H+ + ++ Sbjct: 557 TLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAEDAAHVAETIINQL 616 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 L +G + + L ++ ++ Sbjct: 617 QVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESGKG-TYKFFTPDMN 675 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFL 539 Q K++++ +R A+D +L+L+ QP + + G + ++ + G++ P +F+ Sbjct: 676 IQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPTRGVIPPGEFI 735 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L VL + + +VNL P + N+ ++ + + Sbjct: 736 PLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEPNLIEKVSEILR 795 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + LEITE A + ++++ +++L G RI+IDDFGTGY++ LK+ Sbjct: 796 KTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYSSLSYLKKFPLH 855 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+ + A I+ SI +AKA +L VVAE VET QQ L Q +QG Sbjct: 856 ALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEFLRGQECQQVQG 915 Query: 719 YLIGRPQPLAD 729 + + +P P +D Sbjct: 916 FFLSKPLPPSD 926 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 34/356 (9%), Positives = 86/356 (24%), Gaps = 39/356 (10%) Query: 6 NLIKNIK-IFTLAFTLTVVLIQLSRFISPLAIIHSSYIF--------LAWMPLCVMLSIL 56 L + L ++ L F+ + + L W+ ++LSI Sbjct: 28 GLRYGMGEQLWAHAGLHALVEALVGFMGLFVAVVIKLLHRNQQVNGRLLWLCAGLVLSIP 87 Query: 57 FIF---------GWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQ 107 + + L + + L Q +L A ++ W Sbjct: 88 LMALHTAPGSDENVVIWLYALATLLGGGVSAGMLLGEQWHSQPRLPYAALLIALGLMGWA 147 Query: 108 LGTRWRYGLTS--RYVWQRLFWLGLVTPIGIKCSMY-LVGSFFDFPLKISTFFGDADAIF 164 + + + L+ +G + + L+ + G+ + Sbjct: 148 MFFPEHIPDMGQWSQLSDLAVGMNLIGALGFVLAWFALISGHVVSGRRAPLLLGNFSLLM 207 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSP---HFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++ L FY+ R+ + L+ +D + R L Sbjct: 208 ASAAIIFLLADTWDSRWWFYHFLRLAALALLLSYFFALYLKDFRVLRENDARFQALVESI 267 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIF------------TLGVGKLRYPFLNLTWAV 269 V + + + + V + + + L W++ Sbjct: 268 HAGVYRTQVTLERRLVYASAQMHQVAGLSMQQCQEGGVSLKSLVVPEDWPHVQEALEWSI 327 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRW 322 T E ++ ++ + H + ++ Sbjct: 328 KTHVPYEMQYRINHPQRGEMWVSDRGRIIKDHQGQPCWFDGALLNIHEARETEQQL 383 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 101/558 (18%), Positives = 204/558 (36%), Gaps = 32/558 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 + + +S+++ + + ++GY Sbjct: 470 AHKQAEESLITLSAAVEQSPVSIVISDPRGLIEYVNPMFEQVSGYRRAEVMGQNPRILSS 529 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRI 311 K + + + + + + + + + +A + + L + Sbjct: 530 HEKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQAAIAPIFDDHGRPIHYLAIKED 589 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + + A D LT LPN R L +Q + + +DN + + Sbjct: 590 ITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRSRRHGALLFIDLDNFKNL 649 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-----RLQHMV 418 + G ++ + + L ++E + + +L G + +++L + + + + Sbjct: 650 NDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQDLSEQQTEAATQAEGVG 709 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + F+ +Q+T++ LL + Q+ L Sbjct: 710 QKILDALHQPYPFGHFTHHGSASVGVALFNASQDTVEELLKRADLALYQAKDAGRN-TLR 768 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIM 533 + + + + + +R L + LLY QP N G + ++ G++ Sbjct: 769 FFDPDMQAVISARAEMEADMRLGLQENQFLLYYQPQVNHAGRLIGVEALVRWQHPLRGLV 828 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAG 591 P F+PL L V+E+ + L +VN+ L ++ Sbjct: 829 APAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIAVNVSALQFHGESFVS 888 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ R + LE+TE + + + + L G ++DDFGTGY++ Sbjct: 889 DVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVGFSLDDFGTGYSSLSY 948 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL D IKID FV D ++N DA +VR+ + + + V+AE VETQ Q+ L Sbjct: 949 LKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGMMVIAEGVETQMQRDFLEGE 1008 Query: 712 GVQYLQGYLIGRPQPLAD 729 G QGY GRP P+A+ Sbjct: 1009 GCLNFQGYFFGRPVPVAE 1026 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 120/581 (20%), Positives = 215/581 (37%), Gaps = 26/581 (4%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 L+L + + A++ + A T + + Sbjct: 233 LALLFSDQSAIPNLGSVLTTFSMRMVAELERLQSDAQLRLSAVAFETHEGIIITDPDFKI 292 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 L + I G +I L L + + TL L Y Sbjct: 293 LRVNHAFSQITG--FDSQRVIGLHLGNDLWCGLGGLGYELGTLSRWQGETQRLHADGYPY 350 Query: 290 SLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 I+ + + + RR A D LT LPN R L + Sbjct: 351 PQWEIVTPVQDDRGEISHFVICFEDISERKEAERRIQDLAYYDELTGLPNRRQLHETLAH 410 Query: 347 E--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + +D+ + ++ G ++ + L L+++ + L +L G Sbjct: 411 AFGEASRDYLIGALLFIDLDHFKTINDSLGHATGDWLLKEVASRLKRLVRQGDCLARLGG 470 Query: 399 SELLLVLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQET 450 E +L+L + E + + L S + L +G F G ++ Sbjct: 471 DEFVLLLPSLSASPPQAEMQADLIAERLISEIAAPYNHAGQVLHIGASVGITLFPGREQG 530 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL Q Q+ + + + Q +++L+ N +R+AL+Q +L LY QP Sbjct: 531 VDDLLKQADTAMYQAKSAGR-KTRRFFDASMQLQADRRLLIHNELRSALNQQELTLYYQP 589 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + ++ +++P +F+P+ + +L VL Sbjct: 590 QHMVEGGDIIGVEALIRWQPPGRALVSPAEFIPIAEETDLIVDIGNWVLYEACAQYVRWE 649 Query: 568 CDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 + SVN+ + RI + + P ++ LEITE +AE ++ Sbjct: 650 ENGIHIPQLSVNVSAKQFHATDFVDRIHDVLASTGMDPASLNLEITESVVLGHAEDTISK 709 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + +L G AIDDFG GY++ LKRL AD +KID F++DI + + IV ++ + Sbjct: 710 MSELKALGISFAIDDFGAGYSSLSYLKRLPADELKIDRSFIQDIPRDGDNMAIVEAVIAM 769 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 A+ +V AE VE++QQ L G + QGYL +P P+ Sbjct: 770 ARHMGFNVTAEGVESRQQLEFLQAQGCHFYQGYLASKPLPV 810 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 115/743 (15%), Positives = 239/743 (32%), Gaps = 33/743 (4%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLC------ 69 ++ +L + Q + ++P ++ + L ++ ++L + R + + Sbjct: 232 MSRSLALPNGQWTLGLTPAQGWGAAGVLALRCALGLLFALLMAYLARLLFALKAHERGLA 291 Query: 70 ---GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAI-LRWQLGTRWRYGLTSRYVWQRL 125 + + T + F + G + + + + Sbjct: 292 DQVAQRISEIQATQQQLRATIDAIPDPLFEIDQDGRYCSVHSQRAELLMGPAEQLIGRNV 351 Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN-MLFY 184 + + + + D T +L + Sbjct: 352 TEVLPTLAALSVLDVLHEAQAQGWSVGRQIMLDLPDLGPTWFELSAARKPQAAGAKPRII 411 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 L+R I +Q + + + + Sbjct: 412 LLSRDITERKRSQEQLQLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESEAVGQ 471 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS-- 302 V + + ++ + + Y ++ + Sbjct: 472 SVRLLTMAEAGPDCNA--DAVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDGDAN 529 Query: 303 ---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKS 351 + + R R A DPLT LPN L + + + Sbjct: 530 GPITHSITLFRDISLQREAQERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQARGGQLA 589 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ G + + ++ R L L+ + + +L G E LL+L Sbjct: 590 LLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGPQDTVSRLGGDEFLLLLPATSAA 649 Query: 412 GRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + +L ++ + L + E+ L + + Sbjct: 650 HAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSG 709 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + +T + + + N +R AL++ L+ QP + + G + +L Sbjct: 710 RNR-YGFFTADLQARTARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWH 768 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLL 585 + G++ P +F+P+ VL + + + R SVNL + Sbjct: 769 HPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFR 828 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + + R ++ + + + LE+TE A + +++ ++QLH G R+++DDFGTG Sbjct: 829 HPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTG 888 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR Q +KID FV+D+ + D IV +I +A+A + AE VET Q Sbjct: 889 YSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQL 948 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L G QGYL RP P Sbjct: 949 QFLRAQGCDEGQGYLFSRPLPAD 971 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 672 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 111/579 (19%), Positives = 219/579 (37%), Gaps = 39/579 (6%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL----------- 229 + + T++ ++ +E+R L AA +++L Sbjct: 308 AIAIHHTQLYQQAQIELAQRQQIETALRQREQRFKALIENAADIIIILDAQFCFSYLSPS 367 Query: 230 ---LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + I ++ + + + + + +F Sbjct: 368 IKKVLGYSCEELIGQSILTLIHEDEEFVFRETLNKVI----ENPEISVSEVEYHFRTRHH 423 Query: 287 TEYSLAFILAVLISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 T + ++ L++ ++ + + + AL D LT LPN L Sbjct: 424 TWSIMEGVVKNLLNEPGVEGIVLNFHEITQRKLAEAQLRHDALHDSLTGLPNRALLMDRL 483 Query: 345 EQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 Q + L +D + ++ G ++ + S L + + + + + Sbjct: 484 TQAINREKGRFYTHFAVLFLDVDRFKLLNDSLGHLVGDQLLISFANCLKKIRRFTDTIAR 543 Query: 396 LPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E +++L G+ + + S ++ + + + + E Sbjct: 544 LGGDEFVILLEDLSEVGQAIKVAQRINEILSSSFLIDDQEIFITASIGIAFSNSSYEHPS 603 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 +L + + + + KQ+ L N +R A+++ +L++Y QPI Sbjct: 604 QILRDADTAMYYAKNNGRGK-YQVFDSSMHIHALKQLQLENDLRRAIERDELVVYYQPII 662 Query: 513 ---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N G + ++ G+++P +F+P+ + L D VL + + + Sbjct: 663 CLKNGTLIGVEALVRWQHPQEGMISPAEFIPIAEETGLIIELDQWVLNTACQQMRFWQEK 722 Query: 570 KKGP---RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 SVNL Q ++ I + + + Q + LEITE N S+ Sbjct: 723 YSDFKSITLSVNLSGRQFSQPDLIKNIDNILTQNKLEKQYLKLEITETVLIENPNSAAEM 782 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 +EQL + + +DDFGTGY++ L R D++KID FV +I TNT ++ I+R+I L Sbjct: 783 LEQLIERKVTVCLDDFGTGYSSLGYLHRFPLDVLKIDRSFVSNIETNTSNSTIIRTIITL 842 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 A+ + V+AE +ET+QQ+ L LG Y QGY P Sbjct: 843 ARELEIEVIAEGIETEQQREFLQSLGCHYGQGYWFSPPV 881 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 672 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 118/564 (20%), Positives = 206/564 (36%), Gaps = 28/564 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY 242 R+IV T+ ++ +LL L+ I GY Sbjct: 182 RVIVGVGLDISARLETERTLQLAA----TVFENSSEGILLTDADGTLITVNPAFTRITGY 237 Query: 243 LVP--VFFIIFTLGVGKLRYPF-LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + + + + +++ Y + L+ + Sbjct: 238 TEEQALGRRSRMFRTDHVGQATNMQMMQSLAEHGHWQGEMFDRHRDGRLYPVWLSLSAVY 297 Query: 299 -ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKS 351 + + R + R A DPLT L N AL + E E + Sbjct: 298 DEDRVSNYVGVFTDISRRKAAEDRLVFLASHDPLTRLLNRDALFRKLEDICLSGIEQSFA 357 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ +G + +R + L ++ N L + G E L+L Sbjct: 358 VLFIDLDRFKLINDSFGHATGDNLLRIVAARLSFVVGSNALLARQGGDEFTLLLEDTGQR 417 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + M N L S+ I N L + + + LL ++ Sbjct: 418 TAVIDMANRLLDELSQPITLENQELHITASIGIALAPEHGKDAATLLRHADTALYRAKDA 477 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + G + +++ L N +R AL + L L QP + + G + +L Sbjct: 478 GKN-TFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLLRW 536 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 + G ++P F+PL + L VLE+ + LA +VNL Sbjct: 537 HHPELGQVSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAHQF 596 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + + ++ + + LE+TE +N +++ + +L + G R++IDDFGT Sbjct: 597 NDPGLTHHLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDFGT 656 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ +LKR D +KID FV I + D I +I +AK SLSVVAE VET Q Sbjct: 657 GYSSLAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETADQ 716 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 + L + G + +QGY P Sbjct: 717 RDFLARCGSELIQGYFYSPPLAAE 740 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 672 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 118/653 (18%), Positives = 218/653 (33%), Gaps = 41/653 (6%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 V QR + + LV + + + + +L Sbjct: 55 ARTLVRQREYGVVLVDMQAEDTASLDLMEWLHNHRAGMDVIALTADPTCRAPIEALRRGA 114 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIA------PSLGKEKRAFTLSWLAALSVLL--- 227 + + M+ + R E+ + + + + Sbjct: 115 SEFIRKPFAPEAMLATLENTLERRRLSRQNEQIRHRLKRSERLYRFIVDNSPDFIYVLDA 174 Query: 228 ---LLLCTPYENDFIAGYLVPVFFIIFT-LGVGKLRYPFLNLTWAVSTLCLLNYNQNFL- 282 + + F L + R T +N Sbjct: 175 EGRFTFINRSAERLLGMTPDTLLGEHFQCLIADEDRAVAERRFNERRTGQRATHNLELQL 234 Query: 283 ----QGVETEYSLAFIL--------AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + ++ A + + R + H QA D Sbjct: 235 APPGAAGQPTRTVDLTAMGIYADGDAPHPGQFLGTYGIARDVTDRKHAESIVHYQAHHDL 294 Query: 331 LTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L+ Q + L +D + ++ G + ++ + + Sbjct: 295 LTGLPNRALLKDRLAQALARARRGNEEVAVLFLDLDRFKVVNDSLGHSVGDQLLQQVAQR 354 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGA 439 L ++E + L +L G E L+L ++ + + +N L +G Sbjct: 355 LRACLREGDTLARLGGDEFTLLLPAIPDRPAVERVAQKCIDALEQPFMVHNHRLFLGVSI 414 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + ETL+ L+ H ++ + + + + +R AL Sbjct: 415 GIALFPEHGETLETLIKHADVAMYHVKEHGKGH-YTFFDQAMGSRIDHHLNMETGLRRAL 473 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +Q + + QP + G + ++ + G ++P +F+P+ Q L +L Sbjct: 474 EQHEFRVAYQPQVDVVSGRVTGMEALIRWQHPETGEVSPREFIPVAEQTGLILPIGEWLL 533 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 S + L P +G R +VNL PL + Q++ R+ + + + LEITE Sbjct: 534 RSACEELLRWPDGNEGLRLAVNLSPLQVHQRDFVDRVRAICDETGFPLRRLDLEITENLL 593 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + ES + + L + G I IDDFGTGY++ L+RL +KID FV I N Sbjct: 594 MRDVESVVEKLRTLSRLGVTITIDDFGTGYSSLGYLQRLPIHALKIDQSFVHAIRENEEK 653 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V +I +A L+VVAE VET++Q L +L +QG+ P + Sbjct: 654 GTLVETIIAMAHGLGLNVVAEGVETKRQLDYLRRLQCGRMQGFYFSYPLSGHE 706 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 104/560 (18%), Positives = 196/560 (35%), Gaps = 24/560 (4%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC------TPYENDFIAGYLVP 245 R A E + + + LL +F Sbjct: 471 DRIDLVAEQARTSAALRESEVKYRKVLETSQDGFWLLNRDWLLTEVNDAYIEFSGYRREE 530 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + T + + + + + C Sbjct: 531 LVGMHVTQLDASDASEMARHIASAVEDGNATFETRHRTKSGELKPVEVSVTFDAGRAACF 590 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 VR R + + D LT LPN Q S + I Sbjct: 591 SLFVRDLSRRDEAQEHIRRLSHFDTLTGLPNSSLFADLLRQAIGNAQRSGESLSVMYIDI 650 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + I + L +L G E L++L + H+ Sbjct: 651 DHFQHINDTLGHRIGDRLLVEIAGRFRNALCAENTLARLGGDEFLILLPHAQ-VECAAHV 709 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 L + + + + + + + E + LL + ++ + Sbjct: 710 AEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRADTATNRAKSDGRN-TY 768 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN----KEGEGYDEILARLKYDG 530 + ++ + L +R AL++ +L+L+ QP + G + ++ + Sbjct: 769 RFFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEF 828 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNI 589 G+++P +F+P+ L V+++ L L + VNL Q+N+ Sbjct: 829 GLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQNL 888 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + R+ + + LE+TE + +++ ++ LH+ G R++IDDFGTGY++ Sbjct: 889 PATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSSL 948 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKR + D +KID FV+D+ + IV +I LA+ +AE VE +Q A L Sbjct: 949 NYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLR 1008 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 G Q +QGYL RP P + Sbjct: 1009 ASGCQEVQGYLFSRPLPPDE 1028 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 117/633 (18%), Positives = 226/633 (35%), Gaps = 33/633 (5%) Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLK--ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY 185 L P + L + + FF V + + Sbjct: 411 LHANAPARLWIGERLADPWALGLDSHVRARFFQQLQDRDAVDEFEVHWRGPTEAVWAVLS 470 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL-----LLCTPYEND 237 R++ A + I E+R + ++ + ++ +L + Sbjct: 471 ARRIVFQGRDAVLTTLAPINHLKQLEQRLELWAKVFETSSEGIFIVDAQQRILTANWALT 530 Query: 238 FIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 G+ + L R + +L V T + +Y + Sbjct: 531 RSTGHDLIELMGGDPAELLAGADARQTWQSLVERVQTRGSWQGEVRICRRAGGDYPAWLL 590 Query: 295 LAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------ 345 + + + + + RR A D LT LPN + Sbjct: 591 ANAVRDRAGHVSHWVCTSIDITDRKESERRIRFLAEHDVLTELPNRALCIERLRLALQQA 650 Query: 346 --QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + +D + ++ G + +RS+ + L+ ++ + + +L G E ++ Sbjct: 651 RRTGQKVAVLFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVV 710 Query: 404 VLSGPETEGRLQHMV-NILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 VL+G + H+V L + + + F + + + L+ Q Sbjct: 711 VLNGLADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQAD 770 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 Q+ A A ++ + ++++ N +R+A+ QG L L+ QP + Sbjct: 771 VAMYQAKAQGRNGA-QFFTAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGRV 829 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRF 575 G + +L + G + PD+F+P+ + L V+E+ + Sbjct: 830 AGVEGLLRWHSPELGHVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAV 889 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 S+NL L L + + +R+ + P + LE+TE ++ + + L + G Sbjct: 890 SINLSALQLRDPGLLDVLRASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELGL 949 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 R++IDDFGTGY++ L R D +KID FV+D++ + D I+++I L L VV Sbjct: 950 RLSIDDFGTGYSSLNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVV 1009 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE + + L G LQGY RP Sbjct: 1010 AEGVERELEVQALRAAGCDELQGYHFARPMAAD 1042 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 101/571 (17%), Positives = 216/571 (37%), Gaps = 31/571 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLG--KEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAG 241 ++ FA + + + + + A T+ + ++L ++ I G Sbjct: 708 LVQDVAFALDVHEHEQQQAFSMKQLQLAATVFDNSREGIVLTDKNEKIVSVNRAFSDITG 767 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y R + N+ ++ + Y ++ + Sbjct: 768 YRDDEVLGQTPRILKSNRHGRDFYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAV 827 Query: 299 IS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + +++ + + DPLT LPN + Sbjct: 828 CDDQQEVSHYIAVFTDISQAKESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKH 887 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + C +D+ + ++ +G ++ +R I L ++E++ L +L G E +L+L Sbjct: 888 HSFAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLED 947 Query: 408 PETEGRLQHMVNILN---SRQIHWN--NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 R+ M + + I + + + + + LL + Sbjct: 948 VADSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSAL 1007 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 ++ H E ++ Q ++V L +R AL++ + +Y QP + + G Sbjct: 1008 YRAKQHGRAR-FAYYNEEMTEQAQERVQLSFHLRQALEKKEFAVYYQPQVDLGTGQIVGA 1066 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + ++ + G++TPD+F+PL + +L + + +VN Sbjct: 1067 EALMRWNSPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAVN 1126 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L + +++IA R+ + + + LE+TE + ++ ++ L++ G R+A Sbjct: 1127 LSAVQFAEEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRLA 1186 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LK ++K+D F+ D+ + D +V +I + ++AE Sbjct: 1187 LDDFGTGYSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAEG 1246 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q+ L +LG Y QGY P P + Sbjct: 1247 VETVAQRDCLAQLGCDYYQGYYCSPPVPACE 1277 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 117/665 (17%), Positives = 225/665 (33%), Gaps = 30/665 (4%) Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS---MYLVGSFFD 148 + + ++ R R R G + +F + ++ + + + Sbjct: 144 FRLGELTITASLHRVYDELRRRVGFILATQFLIIFVVSILILWIFRHLVTRHLADMADYT 203 Query: 149 FPLKISTF-FGDADAIFTVVDLLSLFTAVLI--YNMLFYYLTRMIVSPHFAQILWRRDIA 205 L + ++ N + L + + R+ Sbjct: 204 RDLSLRNLSRPLELDRPDTPAYQRDELGMVTEAINQMRERLIDDVTRRERDEAEIRKFSK 263 Query: 206 PSLGKEKRAFTLS--WLAALSVL-LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 W + L ++ I + + + + R + Sbjct: 264 AIDQSPSSVLICDRQWRIEYANRKFSQLTGNSPSEIIGKHPSSLIDP--GVDSHEARQLW 321 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLN 319 ++ V + + N + Y ++ + S L + + Sbjct: 322 KSIRLQVQRVGVWQGEVNSTRKNGERYWEQLVVTPIKDNNGESTGYLILGEDISIRKRYE 381 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 ++ QA D LT LPN E+ L +DN + ++ G Sbjct: 382 QQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHINDTLGHDA 441 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 + R + ++ + +L G E L+VL G + + + Sbjct: 442 GDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERILKTFAPPFML 501 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + F + + LL ++ A +S + ++ Sbjct: 502 SGQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGK-SAYARFTPEMSEVSHER 560 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + + + +R AL+ G+ LY QPI + + +L G++ PD+F+PL + Sbjct: 561 LQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFIPLAEET 620 Query: 546 NLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L V++ + + +VN+ P I+R ++ P Sbjct: 621 GLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALNDSNLRP 680 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LEITE N+ + ++QL K G R+++DDFGTGY+ LK D +KID Sbjct: 681 ELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGTGYSALSYLKSYPFDTLKIDK 740 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+D++ DA +VR+I ++A + L VVAE VE + L Y QGY RP Sbjct: 741 SFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQGYFYSRP 800 Query: 725 QPLAD 729 P D Sbjct: 801 LPEQD 805 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 124/676 (18%), Positives = 244/676 (36%), Gaps = 41/676 (6%) Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG---LVTPIGIKCSMYLVGSFFD 148 + A+ + +TS RL WLG + +GI ++ F Sbjct: 9 FWLVSLSVFIAVTAAYTSFSFASRITSTSGKIRLLWLGGGSVAMGVGIWSMHFIGMLAFR 68 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS--------PHFAQILW 200 P + + ++S F + ++ + Sbjct: 69 MPFPVHYDVRTTLLSLLMAIVVSGFALRMTSLPRIGPANLLMAGTLMGLGIGAMHYTGMM 128 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY--ENDFIAGYLVPVFFIIFTLGVGKL 258 ++ ++ + LS L A+S L +D + F +G Sbjct: 129 AMEMPMAIRYDPFLVFLSILIAVSASTAALRIVSTLRSDVAVADMPKKFLSALIMGAAIS 188 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRI------- 311 + + A + L + ++ LA + ++ L+ + Sbjct: 189 GMHYTGM--AAARFPLRMSGTPLKNSSDAWLAVTIGLASFMILAIGLILSLVDSHLATRT 246 Query: 312 ---YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNL 360 + N + H AL D LT LPN LE +Q + L +D Sbjct: 247 AGLVGSLKAANEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDGAFSVFFLDVDRF 306 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G ++ + R L + + + ++ G E ++V + G++ + Sbjct: 307 KPINDSLGHSTGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQKDPGKVHEIARK 366 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + + L + F + T + LL + + + Sbjct: 367 IRDCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYAKSKGSGQ-IQFY 425 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 ++ ++ + N +R +++ + +LY QP E E + ++ + GI+ Sbjct: 426 SGELNDSAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILP 485 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI 593 P F+P + L +++ + R +VNL L + +++ I Sbjct: 486 PHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEI 545 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + + P+ + LEITE + E +M + + + G +AIDDFGTGY+++ LK Sbjct: 546 LDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLK 605 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D +KID F+ DI N DA IVR+I L +L V+AE VE+Q Q +L + Sbjct: 606 KFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMEC 665 Query: 714 QYLQGYLIGRPQPLAD 729 QG+ RP P + Sbjct: 666 DAYQGFFNSRPLPPGE 681 Score = 68.9 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 32/325 (9%), Positives = 81/325 (24%), Gaps = 19/325 (5%) Query: 4 EHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR 62 ++ + I+++ F + + + S + + + ++ L G Sbjct: 47 GGSVAMGVGIWSMHFIGMLAFRMPFPVHYDVRTTLLSLLMAIVVSGFALRMTSLPRIGPA 106 Query: 63 GVVP----VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL-- 116 ++ + G+ + + A+ + A+ R L Sbjct: 107 NLLMAGTLMGLGIGAMHYTGMMAMEMPMAIRYDPFLVFLSILIAVSASTAALRIVSTLRS 166 Query: 117 -TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 + + F L+ I Y + FPL++S + + + L + Sbjct: 167 DVAVADMPKKFLSALIMGAAISGMHYTGMAAARFPLRMSGTPLKNSSDAWLAVTIGLASF 226 Query: 176 VLIYNMLFYYLTRMIVSPHFA-------QILWRRDIAPSLGKEKRA--FTLSWLAALSVL 226 +++ L L ++ A + R TL + Sbjct: 227 MILAIGLILSLVDSHLATRTAGLVGSLKAANEKLHYLALHDGLTRLPNRTLLEDRVDQAI 286 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + I +LG + A + + Sbjct: 287 RHARGVDGAFSVFFLDVDRFKPINDSLGHSTGDKVLQQM--ARRLSGTVGPEDTVARIGG 344 Query: 287 TEYSLAFILAVLISFSVCLLYMVRI 311 E+ + F + +R Sbjct: 345 DEFVIVFPEQKDPGKVHEIARKIRD 369 >UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Chroococcales RepID=B7KBH1_CYAP7 Length = 712 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 101/488 (20%), Positives = 178/488 (36%), Gaps = 19/488 (3%) Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE 316 +L +P L S N +Q E+ Y L+ + Sbjct: 209 QLDHPILMGLLDQSKNTQGNLLLREVQVEESIYEQYVHYLPNHQLIRSYLF---DITERK 265 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 ++ QA D LT LPN Q QE + L +D + ++ G Sbjct: 266 RTEQKLKYQAFHDVLTGLPNRIWFNQQLIAALNNAKRQETPLAILFLDLDGFKNINDTLG 325 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 ++ + LL ++ + + + G E +++L + + Sbjct: 326 HTFGDQVLQKFGKRLLGSVRAGDTVCRWGGDEFVVLLPYISHTEDSIKLAQRILDVLKHP 385 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + + E + LL ++ ++ + Sbjct: 386 FEIQKQQFYIKTSMGISIYPQDGEDGETLLKNADAALYRAKERGRNH-FQFYSTTMTTKA 444 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 + + L N + AL+ +L LY QP E G + +L + G ++P K +PL Sbjct: 445 SLVLRLENLLHRALENQELSLYYQPQVKIKTGEITGIEALLRWTHPELGQVSPHKLIPLA 504 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 Q +L L++ + +VN Q N+ I ++ + Sbjct: 505 EQTDLIIPIGQWALKTACQQSLDWQKLGIKPLPIAVNFSARQFQQPNLVTLINQVLEETG 564 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++P + LEITE N + + +E+L + G I++DDFGTGY++ L++ +K Sbjct: 565 LAPNLLELEITETTIMQNEDFARQALEELRQMGVHISLDDFGTGYSSLSYLQKFPLTTLK 624 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F + N D I+ +I L L V+AE VET QQ +L +L Q QG+ Sbjct: 625 IDQCFTHSLKDNPQDLAIISAIITLGNHLQLRVIAEGVETLQQLEILQRLHCQEAQGFWF 684 Query: 722 GRPQPLAD 729 RP D Sbjct: 685 SRPLNSED 692 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 98/489 (20%), Positives = 192/489 (39%), Gaps = 26/489 (5%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR---------IY 312 + + + +F+ +T F + L+ S L +++ Sbjct: 387 LETVIKCLKSAKPEKTVHHFIDQNQTSRYFEFTVTPLVDGSGQLNSVIQLGHEITNYLDI 446 Query: 313 HRSEWLNR-RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + A DPLT LPN + + +D + + Sbjct: 447 QEQLQQQKNDLDFIAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDLDRFKEI 506 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + +G + + L ++E + + +L G E +++ +T + ++V + Sbjct: 507 NDSFGHASGDLVLIECGKRLKKAIREIDTVARLGGDEFTILIDELKTNNVIINVVKKIIK 566 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 S I N + F + LL Q+ + Sbjct: 567 TLSDPIFVNENIFHITASIGISIFPNDGTDANQLLQNADAAMYQAKEDGKN-TYHFYTKE 625 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 ++ Q ++L+ N +R ALD LY QP + + G++ ++ GI+ PD Sbjct: 626 MTEQAYNRLLMENNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDH 685 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L Q++ + ++ R ++N+ L + Sbjct: 686 FIPLAEETGLIIPLGKQIIAMASQTISEWHQANLTNARIAINVSAKQLRDSRFFHNLNTA 745 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + P + +EITE N E ++ + +L + G I+IDDFGTGY++ LK+L Sbjct: 746 LNKNNCQPDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLP 805 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID FV ++ + DA I ++I ++++ +L ++AE +ETQ+QQ + + G + + Sbjct: 806 ITKVKIDRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLI 865 Query: 717 QGYLIGRPQ 725 QGY RP Sbjct: 866 QGYYYSRPL 874 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 101/523 (19%), Positives = 200/523 (38%), Gaps = 23/523 (4%) Query: 229 LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + I GY+ + F L A+ N + Sbjct: 394 ITDVNGAFFEITGYVREELLGQNPRIFSSGRHDKAFFDKLWNALLANGKWNGEIWNRRKN 453 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE- 341 T + ++ + + + + + A DPLT LPN Sbjct: 454 GTIFPQNITISTIYDEVGDVRYFVAVFADISAQKENEAQLTHLAYFDPLTHLPNRMKFMM 513 Query: 342 -------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 QA + + +D + ++ +G + + + + L + + + L Sbjct: 514 QLKQEVRQAKRLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQVGDQDVLS 573 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN-NTGLDMGYGAAWGRFDGNQET 450 ++ G E + ++SG + +N L + + L + + + Sbjct: 574 RIGGDEFVALISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMGVSLYPNDGTD 633 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 LL ++ E ++ Q+ + + L + + A++Q L L QP Sbjct: 634 ADTLLRNADAAMYRAKNDGRN-NYAFYTESLTQQSFEHLKLQSALYGAIEQNALYLMYQP 692 Query: 511 IRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + G++ +L G+++P F+P+ + L L VLE+ + Sbjct: 693 KLDLVSRKTVGFEALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLETACRQGMRWL 752 Query: 568 CDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 + K R +VN+ L + + + R+ + + + LE+TE N + ++ + Sbjct: 753 REGKHFGRIAVNVAGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMMQNPDLAIRD 812 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 +++L G +++DDFGTGY++ LK+L +KID FV+DI +T + I +++ L Sbjct: 813 LKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIAL 872 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A L ++AE VET++Q L + QGYL RPQ D Sbjct: 873 GHALKLDIIAEGVETKEQADFLQQNQCDQAQGYLFSRPQLPED 915 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 115/685 (16%), Positives = 223/685 (32%), Gaps = 38/685 (5%) Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 + F + + G+++ + L +G R G L Sbjct: 399 LRGVISGVFRMDDAIAGALEGARSSGIELCLTDLDAPVGNRRLAGPVGCDSADWARGL-- 456 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 P+ + + + G I + S+ ++ +L +L Sbjct: 457 --PVSRSALQFAGRQWSLVQRAGPEYLGA---IRSWAAWSSIAIGLVSVGILGAFLLITT 511 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI----------- 239 + L R + A + + L + ++ + Sbjct: 512 GNTRRIAALIERRTTELASAGSKLRQQQAALAQAQRVARLGSWETDNELCEVRCSAELHR 571 Query: 240 -----AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 G L + ++ + L + Sbjct: 572 VLERPEGRLGTMEELMDAVIPLDRPALLGALEQVARAPDHATLDCRVQARPTRIVQFQIE 631 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQ 346 + V+ + A D LT LPN A L A Sbjct: 632 SEWQDGVLERIRGTVQDVTSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRH 691 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + L +DN + ++ G + + ++ + L ++E + +L G E + +L Sbjct: 692 QHILAVLFLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLP 751 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + ++ L F + + LL Sbjct: 752 RVTRAEDAAAVARKMLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMY 811 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 + ++ + +++LL N +R A+++ +L L+ QP + G + Sbjct: 812 GAKEVGRN-NFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCE 870 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ D G++ P +F+P+ L VL + VN+ Sbjct: 871 ALVRWQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNIS 930 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L + + ++++ +P+ + LEITE +++ + +L G +A+D Sbjct: 931 ALQFRRADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALD 990 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKRL +KID FVKD+ + DA + + LA+ L VVAE VE Sbjct: 991 DFGTGYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVE 1050 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ 725 T Q+ L G LQGYL RP Sbjct: 1051 TVAQRDFLVARGCHTLQGYLYSRPL 1075 Score = 66.9 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 71/260 (27%), Gaps = 17/260 (6%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L F+L + + ++S + Y + + LS I+G R + V G Sbjct: 6 LRFSLVALGYAVVGWLSLQLAVPPGYAVPFFPAAGIALSARIIYGPRILPAVFLGSLAVQ 65 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + S + V G + G + R L+ Sbjct: 66 IPALLQSSVAVPVWWGPALVPLGAVLQAGAGAWLAERLIGFPNPLDAPRPIIRFLLGVAP 125 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + C + + FGDA + V++ L + Sbjct: 126 LSCLVSPTFAIPVLMGAGVISFGDATFN-WWNWWVGDTLGVVVATPLMFAFL-------- 176 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 P+ R F ++ ++++LL ++ A + F Sbjct: 177 --------GHPAADWRARRFGIAIPLGIAIVLLGFAFHQVRNWEALRVETQFSRDADHIT 228 Query: 256 GKLRYPFLNLTWAVSTLCLL 275 ++R + ++ L Sbjct: 229 SQVRKRLDMQLDMLQSIERL 248 >UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B330_9CHRO Length = 1188 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 103/589 (17%), Positives = 200/589 (33%), Gaps = 25/589 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 +V + + + R I + + W + + Sbjct: 589 LIVAEMRVGLIIWEQQKAHLISLRDITERKQIEKALSESEQRLESILNSIEDVVWSTSAT 648 Query: 225 VLLLLLCTPYENDFIAGYLVPVFFIIFTL---GVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 L L+ P + + + A+ Y Sbjct: 649 TLNLIYLNPATERVYGCSIEQLLAEGNLWFNLVHPDDQALIDAHFKALEDTGHSEYEYRI 708 Query: 282 LQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 ++ T L + + + + + A DPLT LPN Sbjct: 709 VRPDGTVRWLYSRSRTIYDPTGKPIRFEGIDSDITERKSFTEQLQYNAYHDPLTSLPNRI 768 Query: 339 ALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L + + + L +D+ + ++ G ++ + +I + L + Sbjct: 769 FLLEKLEEALKKNQNRENIFFAVLFLDLDDFKVVNDSLGHIVGDQLLIAIAQRLKTSLSV 828 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDG 446 L + G E ++L ++ + ++ N + + D Sbjct: 829 PHTLARFGGDEFTILLEEIQSTDEPLKAAQKIHNDLTQPYDLNGQQVFISTSIGIALSDP 888 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + Q +L Q+ ++ + + K++ L +R A++ + LL Sbjct: 889 SYIHPQEILRDADTAMYQAKRWGKG-GYAVFDQQMHLRAVKRLHLEIELRQAIELKEFLL 947 Query: 507 YAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QPI + G++ ++ G+++P +F+P+ + L + + + L Sbjct: 948 YYQPIVSLSTGYLTGFEALIRWQHPKKGLISPVEFIPIAEETGLIVPMGKWITQQACRQL 1007 Query: 564 ATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + SVNL L ++ I + + I P ++ LEITE N Sbjct: 1008 KLWQEQYNLKNPLQISVNLSSKQLRNSHLIEEIDEILAQTGIDPSSLKLEITESMLMENV 1067 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + +M + +L K + +DDFGTGY++ L R +KID FV + +A IV Sbjct: 1068 DIAMNILIELRKRNIELCLDDFGTGYSSLSYLHRFPVTTVKIDRSFVMQMQPGNSNAEIV 1127 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I LA + ++V AE VETQ Q L L + QGY +P P + Sbjct: 1128 HAIITLAHSLEMTVTAEGVETQLQLQQLQWLECEQAQGYFFSKPLPPKE 1176 Score = 49.2 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 9/124 (7%), Positives = 23/124 (18%), Gaps = 4/124 (3%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRY 260 A + +L L C + GY I + + Sbjct: 140 QAEIQRERFFTLSLDLLCIAGFDGYFKCLNPAWETTLGYSTEELISQPFIELIHPDEREA 199 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 + ++ + T L + + + + + Sbjct: 200 ALTEIERLGRGQLTYHFENRYRTREGTYRWLTLTAVPYVEE-GLIYAVAHDITKRKQTEA 258 Query: 321 RWHL 324 Sbjct: 259 EIQQ 262 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 126/692 (18%), Positives = 234/692 (33%), Gaps = 38/692 (5%) Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 L + + Q + ++ L + R + L Sbjct: 13 AYPGLQILLIADPTLAVLLQPLLAQSLLEPVQIVPIHPPEAALAQLHQADRSELILLDLA 72 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + + I ++ L + T L + L L R + Sbjct: 73 LSENLDCLSTLHQHAPHVPILVLLEESQTGIAEQTLSAGATDYLFKSELTPSLLRRSLRY 132 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG--------YLVP 245 +++ A E R F + + ++ +L E + I Sbjct: 133 ILHGTEFQQVEANLRQSEARFFAAAEASLDALFILQSYRHPEQNQIIDFVCTDVNSRGEK 192 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + +G+ L + + + Q +E E + + + Sbjct: 193 LLGKPRQAILGRFLSELLPVDSSKQLIQKYTLVVETGQVLEEELPVNITPLPITWLHHQI 252 Query: 306 L-------YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAG 349 + R + H QA DPLT LPN Q+ Sbjct: 253 VPLGDGIAITARDISERKQKEAELHRQAFYDPLTELPNRTYFMNRLTKVLERAGRRQDFH 312 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G ++ +++I R L ++E + + +L G E ++L Sbjct: 313 YAVFFLDLDRFKVVNDSLGHLLGDEFLKAIARRLSSCLREEDMVARLGGDEFAILLEELS 372 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + L S L E + +L Q+ Sbjct: 373 NPDIVHRIAERLQRVLSAPFTLKQHELFTTASIGIALGTSYYEQPEAILRDADIAMYQAK 432 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEIL 523 + ++ + + K+ L + +R A+++ + L QPI + G++ ++ Sbjct: 433 TQGKARHI-IFDQAMHTRAVKRWQLESDLRWAIERREFCLVYQPIVSIQTERLIGFEALV 491 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-------KGPRFS 576 G ++P +F+ + + L VL + L S Sbjct: 492 RWHHPQRGWISPAEFISVAEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVS 551 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q ++ I ++ ++ + + LE+TE N ++ + QL + G + Sbjct: 552 VNLSSKQFCQPDLIHYIQQVLQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGIQ 611 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY++ L R D++KID F+ I T + IVR+I LA++ +L VVA Sbjct: 612 LALDDFGTGYSSLSYLHRFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVVA 671 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VETQ Q L L Y QGYLI RP Sbjct: 672 EGVETQAQLDHLQALQCGYAQGYLISRPLTPE 703 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 104/557 (18%), Positives = 207/557 (37%), Gaps = 22/557 (3%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R+ + + + + L+ + + V Sbjct: 433 RLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGCLLAQARGLPFAQVV 492 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 + L P + + +Y + A + +L Sbjct: 493 QLFDQESGAPLPSPVEQCLQDREVYGVRE-SAALRHRSGRDYGVQISAAPIAGRDGRVLG 551 Query: 308 ---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLR 356 + + + L ++ A D LT LPN + + + Sbjct: 552 AVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDRVHQACQSGRRHGRRFAVIFMD 611 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR--L 414 +D+ + ++ G + ++++ + L ++ ++ + +L G E +++LS + + Sbjct: 612 LDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICRLGGDEFVVLLSDLDDVEVDGV 671 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + ++ T +++G F G+ E L+ + +S Sbjct: 672 AEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPGDGEDPDTLMKRADAAMYRSKREGRN 731 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKY 528 + V + ++ L +R AL G +++ QP+ + + +L + Sbjct: 732 R-YHFFSKAVDDAASARLQLEADMRRALAAGQFIVHYQPVVHGRTRDAVAVEALLRWDRA 790 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQK 587 G+ +P F+P+ + L VL + L G +VN+ P+ L Q Sbjct: 791 GQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWSGTALGGISVAVNVSPVQLAQA 850 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + + + EITE + E+++ + +L G RIAIDDFGTGY+ Sbjct: 851 DFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEMLRRLKGLGVRIAIDDFGTGYS 910 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR D +KID FV+D+ + D +VR+I +A++ L VVAE VET+ Q A+ Sbjct: 911 SLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMARSLRLHVVAEGVETEAQAAI 970 Query: 708 LHKLGVQYLQGYLIGRP 724 L + QGYL RP Sbjct: 971 LAAMECPAFQGYLFARP 987 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 109/561 (19%), Positives = 202/561 (36%), Gaps = 25/561 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I A + R + A L+ I GY + Sbjct: 482 DITEQKRADLALRLQSRALDASVNA---ILITAPSPSGNLIEYVNPAFMRITGYDLDEVI 538 Query: 249 IIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFS 302 + + + A++ ++ + + +A + Sbjct: 539 GHDCRVLQRDDRDQEGVALIREALAANREVSAVVRNYRKDGALFWNQLFIAPVPNAEGVI 598 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + ++ + QA D LT LPN L G + Sbjct: 599 THHIGVINDVTELIRYQEQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVAVVF 658 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + + + L + ++ + + G E ++V++ E L Sbjct: 659 LDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVARHGGDEFVIVMTDTVDEQSL 718 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + + T L +G F + + + L+ + ++ Sbjct: 719 ITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDMGRN 778 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + ++ ++ L +R AL + LL+ QP + + G + ++ Sbjct: 779 -TFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDIVSGQIVGIEALVRWHDP 837 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + G++ P F+PL + L VL + P R SVNL Q+ Sbjct: 838 EAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVNLSARVFQQR 897 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 NIA ++++ + P+ + LE+TE NAE ++ + +LH G +AIDDFGTGY+ Sbjct: 898 NIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYS 957 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR D +KID FV DI + D I +I LA + L V+AE VET Q Sbjct: 958 SLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDF 1017 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L + +QG+ +P Sbjct: 1018 LKERACDEMQGFYFAKPLSTE 1038 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 114/557 (20%), Positives = 221/557 (39%), Gaps = 32/557 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 + E R ++ A +L+ ++ I GYL F Sbjct: 450 TERQKVESELRIAAAAFEAQEGMLITDRHNVIMRVNQAFTSITGYLAEEVLGKNPCFLAS 509 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRI 311 + ++ ++ + Y +++ + + R Sbjct: 510 GRHDAGFYQSMWEGLNEKGKWEGEVWNRRKDGEIYPEYLLISAVKDIKNEVANYVATFRD 569 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 ++ A DPLTLLPN R L + + +DN + + Sbjct: 570 ITANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHALASSARNRNIGALLFIDLDNFKTL 629 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMV 418 + G M ++ + L ++E++ L +L G E +++L + + + + Sbjct: 630 NDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGDEFVVILENLSELAMDAATKAELIG 689 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + F G+ ++ L+ Q QS L Sbjct: 690 EKILAALNQVYPLASQEYHGAASIGVTLFAGHALSIDELMKQADIAMYQSKKSGRN-TLR 748 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIM 533 + ++ L +R A+D+ L L+ Q N + ++ + G++ Sbjct: 749 FFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQLNSVGTPLSAEALIRWVHPVRGLI 808 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAG 591 +P F+PL L VL++ L + ++ +VN+ QKN Sbjct: 809 SPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNFVA 868 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + +R+ I+P+ + LE+TE N E + + L + G + ++DDFGTGY++ + Sbjct: 869 LVKETVQRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLDDFGTGYSSLQY 928 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL + +KID FV+++ +++ D IVR+I +A++ +L+V+AE VET++Q LL + Sbjct: 929 LKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQDI 988 Query: 712 GVQYLQGYLIGRPQPLA 728 G Y QGYL G+P P+ Sbjct: 989 GCNYYQGYLFGKPMPIE 1005 Score = 43.1 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 22/346 (6%), Positives = 65/346 (18%), Gaps = 37/346 (10%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT 74 + + + + +S A + S+ IF + ++ +L + + + + Sbjct: 115 QMFLIFMLAGLTTASVVSYSADLVSAVIFALSIVTPLIARLLIVSDELAMAMAIAVLLYL 174 Query: 75 NLWNFHLSFL-------QTAVMLGSQTFVVLCA------CAILRWQLGTRWRYGLTSRYV 121 L + G + + +G Sbjct: 175 GFLMVSLRLINRNLIENIRMRHEGELREAAMNVSKERYRLLLAHSPVGIFHYDLNFVITY 234 Query: 122 WQRLFWLGLVTPIGIK------------CSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 F + P+ L + + + Sbjct: 235 CNARFAELIGCPVAQVNGLDLYNLSDNAVLPALTAALAGDRGYFEGQYQAVFNDGWIAMT 294 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 + + + I A++ + K T+ L + +L Sbjct: 295 CAASCDARGNVIGGIAIVESIHERKMAEMALALSNQKHDEERKLFQTILDNLPLGMWMLG 354 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF---------LNLTWAVSTLCLLNYNQN 280 + + G + + Sbjct: 355 VDGKIKFVNETFCNALGIAAHDFFDAGHYSDLLPLSIADKCKESDRACFMQGEPHYSTEW 414 Query: 281 FLQGVETEYSLAFI---LAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + L L + L+ + + + Sbjct: 415 LPFTDGRAHLLEMTRVRLHDSANNVTGLIGLAADITERQKVESELR 460 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 125/778 (16%), Positives = 271/778 (34%), Gaps = 65/778 (8%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL----- 56 F++H I+ + F+ F S +I + Y L ++ +L Sbjct: 137 FIKHYSIRGLAQFS--------------FDSIFIVIMNIYFTLTFILDISSFRMLTTDTW 182 Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 + G+ ++ + S + ++++G +V + + G + + Sbjct: 183 VLIGYFIAQSLVIYAVISLYRREEYSSSRISLIIGFTIILVYGYIHLFQLNAGIKPSSEV 242 Query: 117 TSRYVWQRLFWLGLVTPIGIK----------------CSMYLVGSFFDFPLKISTFFGDA 160 + + +GL + + I +++ F F Sbjct: 243 SYLIHTASILLIGLSSILYILDKPIQHETKTKYYRFDYVRFILPYFSIIITFSFIIFQPW 302 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW-----RRDIAPSLGKEKRAF 215 D F ++ L+ + + + + + ++ + + E+R Sbjct: 303 DDKFMLIGLVLSLILLFLRQLYMWKDNQALIDTYEQLTTQLEGKVEEGASALSKSEQRYK 362 Query: 216 TLSWLAALSVLLLLLCTPYE-------NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 +L +V L + ++ + F A Y + + K Sbjct: 363 SLFEDHPDAVFSLNMYGIFQQSNTACESLFTAYYCEVESYSLLHFIDPKDHDLLQKALQL 422 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + Y L L + V + + R ++ A Sbjct: 423 TKEGSPQTLEVRTKEKEGYYYYLHITLIPTFINKEVVGMFGIARDITTLYEKQKQVEHLA 482 Query: 327 LTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN R E+ + + L +D + ++ G + + Sbjct: 483 FHDALTGLPNRRKFEKDLKNILNTAQASANDVAVMFLDLDRFKKINDRLGHGIGDLLLIE 542 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDM 435 + + L ++ + + + G E ++L +E + + + + + L + Sbjct: 543 VAKRLRGCLRSKDVVARQGGDEFTILLPDMYSEKSAAFIAEQILNILNKPFFIKDEELSI 602 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + L+ ++ A+ + +S + L + Sbjct: 603 TPSIGIAMYPDCGTDVTELMKNADMAMYRAKANGKNR-FVFFSKEMSIAQNESNFLEGEL 661 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 AL Q + L QP + K+ G++ ++ GI++P +F+PL + Sbjct: 662 SKALQQNEFFLEYQPQVSTKTKQIIGFEALIRWKHPKLGIVSPAQFIPLAEETGFIIELG 721 Query: 553 LQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 +L + + VNL + ++ I ++ + + P+A+ +EI Sbjct: 722 NWILRTACLEAKRWHNQGFSHLKVGVNLSVVQFNHADLIPTISKVLEETELKPEALDIEI 781 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE A + +S + +EQL G +I+IDDFGTGY++ L + + +KI F+ I Sbjct: 782 TESIAINQNQSVVAKLEQLQNLGIQISIDDFGTGYSSLAYLTKYPINTLKIAREFICGIT 841 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ L+ I+ SI L+K +L V+AE VET++Q L++ ++QG+ I +P D Sbjct: 842 TSPLEEAIISSIITLSKELNLEVIAEGVETEEQWKFLYEQNCDHIQGFFISKPVSSKD 899 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 104/570 (18%), Positives = 207/570 (36%), Gaps = 27/570 (4%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + I S + + R+ + ++ P + Sbjct: 523 IAFIISVIEDISSQKENEAILRQSATVFDNTREGIM-----ITDKNAQIIRVNPAFAELF 577 Query: 240 AGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + + + ++ +++T + L ++ Sbjct: 578 GFSQHELQGKTPVIFKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISA 637 Query: 298 LIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQ 346 + + + + + + + A DPLT LPN L A Sbjct: 638 VRNDKQQLTHYVSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRN 697 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + L +D + ++ +G + ++ + R L ++ ++ + +L G E +++ Sbjct: 698 HHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIE 757 Query: 407 GPETEGRLQHMVNILNSR---QIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G ++H + N + +G + + +T + LL Q Sbjct: 758 GNPALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAM 817 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 ++ AH + ++ +++ L ++ AL +L LY QP + G Sbjct: 818 YRAKAHGR-SCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGA 876 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVN 578 + ++ G+++P +F+P+ + L + VL + +VN Sbjct: 877 EALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVN 936 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + P+ NI + K+ + LE+TE ++ ++ + L K+G R+A Sbjct: 937 ISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLA 996 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D++KID FV DI D I +I +A L V+AE Sbjct: 997 IDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEG 1056 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET++Q L + G QGYL+ P P Sbjct: 1057 VETEEQLTFLKEQGCDCYQGYLMSPPVPAD 1086 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 111/613 (18%), Positives = 211/613 (34%), Gaps = 34/613 (5%) Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 + DF ++ +V + V L A L + + Sbjct: 87 MALADFTTDSLSYRASDLLRGFIVTEAGRYLGVGTVLALLQAANETNRRGVEALALAKAE 146 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL----GVGKLR 259 + + + V + + F + Sbjct: 147 VERAQTFMTG---IVEAMPAMVFVKRADDHSYVLLNRAGEKTLGFKRDEVIGKTDADIHD 203 Query: 260 YPFLNLTWAVSTLCLLNYNQNFL------QGVETEYSLA---FILAVLISFSVCLLYMVR 310 L L + + + L L + LL + Sbjct: 204 AELAALYRERDRAVLDSGEVRVIEEDHVPRKDGGMAILRTKKIALLNAEGRAEYLLGVSE 263 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + + A DPLT LPN +++ + + + +D + Sbjct: 264 DIAERKRAEAQIARLAHYDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDRFKT 323 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ G + ++ L ++E + + +L G E +V +G + + + Sbjct: 324 VNDTLGHPLGDALLKIAAERLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATRLAARIV 383 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + +G + + LL + ++ A A E Sbjct: 384 EAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRG-AYHFFER 442 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + Q + L +R AL G+ L+ QP+ ++ G + +L + G+++P Sbjct: 443 AMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPA 502 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L + VL A P R +VNL P + + ++ Sbjct: 503 DFIPLAEEIGLIVQLGEWVLRRACAEAANWPE---HVRLAVNLSPAQFRDRGLVRTVVSA 559 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + Q + LEITE +++++M + L G RI++DDFGTGY++ L+ Sbjct: 560 LAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRSFP 619 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D IKID FV+DI+ ++ I++++ DL + + AE VETQ Q L + G + Sbjct: 620 FDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCAEI 679 Query: 717 QGYLIGRPQPLAD 729 QGY I RP P ++ Sbjct: 680 QGYFISRPAPASE 692 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 114/631 (18%), Positives = 228/631 (36%), Gaps = 40/631 (6%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM-------I 190 + + + V ++ + L +M + ++ I Sbjct: 170 LLILGHIMLQILLFFAINWLINRFTRPIVKLQSTMESMQLSGSMEQFVPVKLEQGEQDEI 229 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVP 245 A ++ S K A ++ A ++++ ++ I GY + Sbjct: 230 GKLGLAFNQMSEALSNSERSMKLAASIYQSNADAIMVTDENNLIVDVNPAFTRITGYTLD 289 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--- 299 + ++ A+ + Y+ +++L Sbjct: 290 EVRGKNPRIMQSGKHDNEFYRHMWQAILNEGHWQGEIWDKRKTGEIYAKLAHISILRRSD 349 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + QA D LT LPN R L E + Sbjct: 350 GGVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGA 409 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--- 408 L +D + ++ G + + R + ++E + + ++ G E +++L Sbjct: 410 LMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVVLLENLGAD 469 Query: 409 --ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + H+ + S ++ N E+ + L+ Q Sbjct: 470 IKDATQAAAHIAEKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAMY 529 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDE 521 Q+ A+ + + L + +R A+ + L L+ Q + G + Sbjct: 530 QAKEAGRN-AVRFFDPQMQQSVETIAALESDLRHAVHERQLQLFYQIQLDHTHHPVGAEA 588 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNL 579 +L + G+++P +F+P + +L VL+ + +A + +VN+ Sbjct: 589 LLRWIHPVRGMVSPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTRDLVLAVNI 648 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK-FGFRIA 638 Q + ++ + +++ I P + LE+TE A + + + L G ++ Sbjct: 649 SARQFKQPDFVEQVGAMIRKHAIQPARLKLELTESIALEELDVIITKMHALRNGLGISLS 708 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LKRL D IKID FV+D+ ++ DA++V++I D+A + V+AE Sbjct: 709 LDDFGTGYSSLSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEG 768 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q LL + G QGYL GRP PL + Sbjct: 769 VETAGQFFLLKQYGCLLFQGYLFGRPVPLRE 799 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 90/519 (17%), Positives = 189/519 (36%), Gaps = 22/519 (4%) Query: 231 CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + + I GY + L +++ + + + Sbjct: 565 YVNPKFEEITGYKAGEVIGQNPRILKSGYTTEPEYDVLWRQITSGKQWSGEFHNKKKNGE 624 Query: 288 EYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + + + + + + QA D LT LPN + Sbjct: 625 LFWEHASICPMRDEEGYITHFIAVKEDITQQKHNEEILAHQANYDALTDLPNRTLIFDRL 684 Query: 345 E--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + + +D+ + ++ G + ++ L +++ + + +L Sbjct: 685 RQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRL 744 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E LL++ + + +++ N + + + + + + + Sbjct: 745 GGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQDGKNVST 804 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L+ + + ++ + ++++ N +R A+ + +L + QP + Sbjct: 805 LVRNADTAMYAAKQEGRN-VFAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVYQPFIH 863 Query: 514 K---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + ++ + G + PD+F+ + + L +L + +A Sbjct: 864 LNTSQIVGAEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVANWHQQG 923 Query: 571 KG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ P L N+ II +S + LEITE I+Q Sbjct: 924 NNGLWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQSLIKQ 983 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L+ R+AIDDFGTGY++ LKR ++KID F+ D+ + +V+++ +A Sbjct: 984 LNHLKIRLAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHG 1043 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE +ET Q L G Y QGYL +P P A Sbjct: 1044 LGLVVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPA 1082 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 100/570 (17%), Positives = 200/570 (35%), Gaps = 27/570 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + I A+ G + W +A +V L + G + Sbjct: 648 AMLTDITKRKSAEQALSASEQRLEGILGSIQDVVW-SADAVSFATLYLNPTTAMVYGQSL 706 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL----NYNQNFLQGVETEYSLAFILAVLIS 300 V + ++ L L + +Q E L ++ Sbjct: 707 EVCYQSQNFWFEQVHPGDRLLLEYHLQLLMEKDQTELEYRIVQPGGKERWLFRRSQLVRD 766 Query: 301 ---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEA 348 + + + + + H A D LT LPN ++ Sbjct: 767 GEHQPLRIDSIDSDITERKLAAEKLHYNANHDSLTNLPNRSMFLDRLGHALQRNLRRRDL 826 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G ++ I L ++ + L +L G E +++ Sbjct: 827 RFAVLFLDLDGFKIINDSLGHSCGDLLLQGIAHRLRQCLRPEDTLARLGGDEFTMLIENI 886 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + + + N + + Q +L ++ Sbjct: 887 TCPEDVIAVAQRIHQELQKPFNLNGQEIFTNTSIGIALNHPHYGHPQDVLRDADTAMYRA 946 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 A + + +++ N +R A+D+ +L L+ QPI + +G + + Sbjct: 947 KAAGKGR-YAIFNQTMHHHAVQRLQRENDLRRAIDRQELQLHYQPIVCLKTGQLQGVEAL 1005 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNL 579 + + G++ P++F+ + + L +L + + + S+N+ Sbjct: 1006 VRWQHPEEGLILPEEFVAIAEETGLIVPMGDWILWEASRQILELKQSFPQLSHLQVSINV 1065 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L + + + + +++PQ + LEITE N + ++ L + +I++ Sbjct: 1066 SSRQLRDQRLLKTVDEILSSTNLAPQDLKLEITESLLIDNLNLAADVLKSLRQRNIQISL 1125 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L R + IK+D FV + N + IV +I LA L V+AE + Sbjct: 1126 DDFGTGYSSLSYLHRFPINTIKVDRSFVNTMEPNNQNTAIVHTIVTLAHTLGLDVIAEGI 1185 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET++ LH LG QGY RP P D Sbjct: 1186 ETERHLTQLHWLGCDAGQGYYFARPIPSED 1215 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 18/190 (9%), Positives = 45/190 (23%), Gaps = 20/190 (10%) Query: 153 ISTFFGDADAIFTVVDL-LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 F D T+ L S+ A + + + + + + + E Sbjct: 474 GIPFVADQATEITLTPLDGSMVVAEMRVSPIHWQKGKAFLVSLRDITEQHQARLALAESE 533 Query: 212 KRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY------ 260 K+ + L + + +L + + GY V + + Sbjct: 534 KKYRYIVELTSEGIWILDQDQQTTFANQQLADMLGYSVQEILEKNITAFVLVIHHLPESQ 593 Query: 261 -----PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIY 312 + V Y+ F + + + L M+ Sbjct: 594 NSHQKTLQSFPRCVLPNHGQVYDVQFQRRDGSVLWGLVSRSAWYDQWGNYRGELAMLTDI 653 Query: 313 HRSEWLNRRW 322 + + + Sbjct: 654 TKRKSAEQAL 663 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 10/148 (6%), Positives = 35/148 (23%), Gaps = 12/148 (8%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 ++ + + + AL ++ + I G+ Sbjct: 280 HILAAAIDRQEYEERLLLLQQAIDASSNG---ILITDALGSDNAVVYANQGFETITGFNR 336 Query: 245 PVF------FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 F++ G+ L A++ + + L+ + Sbjct: 337 EEVIGQNCRFLLNEDRQGEQNKQLEKLRTAIAHGQECEVVLKNYRKDGASFWNHLYLSPI 396 Query: 299 ISFS---VCLLYMVRIYHRSEWLNRRWH 323 + V + + + + ++ Sbjct: 397 YNQQNFLVNFIGIQTDVTQQKLAEQQLR 424 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 97/554 (17%), Positives = 206/554 (37%), Gaps = 30/554 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFIIFTLG 254 +R + L + ++ L+ + + + + G+ Sbjct: 250 RKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVNHAFEDLFGFKAAEIKGYGMRA 309 Query: 255 VGKLRYPFLNLTWAVSTLCLLN---YNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMV 309 ++ + ++ I + ++Y+ Sbjct: 310 YIVPKHLLGECESTRGAILSGKPMVRETFRQHRDGRLIPVSMIGFPIEFGGQPQGIVYIY 369 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNL 360 + + + QA D LT LPN ++ + + ++ Sbjct: 370 QDISERKAFEEQITHQAFHDALTGLPNRSLFADRLDRALTRARRRGDYQYAVLMIDLNKF 429 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + R L+ ++ + + +L G E ++L +++ + +V+ Sbjct: 430 KGINDTLGHQAGDQLLVEVSRRLMACVRSMDTVARLGGDEFAVILEELKSKKEVMAVVDR 489 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + T + G + ++ + +L ++ + Sbjct: 490 IGAALGKPCMLCGTTVTPGASVGIVLRTRDYQSPEDILRDADIAMYRAKESGRPSMI--F 547 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + + + + L +R ALD+G+LLL+ QPI + EG++ ++ D G++ Sbjct: 548 DRRMHQEILDAINLEADLRAALDRGELLLHYQPIVDVQTGRIEGFEALVRWDHPDRGLVP 607 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAG 591 P +F+PL + L V+ + L + SVN+ +++ + Sbjct: 608 PVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVNVSCHQFVKEGLVD 667 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + + + + P + LEITE +A+ + + +L G +IAIDDFGTGY++ Sbjct: 668 HVAGVLETTGLDPACLKLEITESVLMHDAQHTAGELSRLKALGVKIAIDDFGTGYSSLSY 727 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L++L D +KID F+ N IV+SI LA++ L+V+AE VE Q Q L Sbjct: 728 LRQLPIDHLKIDRSFISGDDVNGESQEIVKSIIALARSLGLTVIAEGVEHQDQLDKLRNA 787 Query: 712 GVQYLQGYLIGRPQ 725 QG++ RP Sbjct: 788 DCDKAQGFMFSRPV 801 Score = 66.2 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 13/146 (8%), Positives = 30/146 (20%), Gaps = 14/146 (9%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY---ENDFIAGYLVPVFFIIFTLGVG 256 RR E++ + A + Y Y + Sbjct: 122 RRRAEEQLDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFDSVDEMTEHFRD 181 Query: 257 KLRYPFLNLTWAVSTLCLL-------NYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 ++ + L N+ + + ++ V+ Sbjct: 182 IKNQLYVEPKRRDDFVRELSAHDQVRNFESAIHKKDGSVIWISENARVVRDADGAVAYYE 241 Query: 307 YMVRIYHRSEWLNRRW-HLQALTDPL 331 V + + +A D L Sbjct: 242 GTVVDITDRKRAEEQLAAQRAYFDQL 267 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 102/574 (17%), Positives = 194/574 (33%), Gaps = 21/574 (3%) Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 + AV ++ +++ A + + ++ Sbjct: 40 ATLLAVDPIGIVTDSFEQVLEHLQKTNSELAATRDELQAIFDSAGGAIVVVDEKMEVVAC 99 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + + AG + + +L + QN Y Sbjct: 100 NSYSQWALFAGERNVMGKNLRSLI---CGHDQEECILEQILTTQRRVEQNDFLHDGRHYH 156 Query: 291 LAFI-LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 L L ++ + A D LT LPN L+ Sbjct: 157 LVGTPLKNHDGAISRVVLLYTDITERRAAAEEIERLAFFDSLTGLPNRVLLKDRLAQLLT 216 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G ++ + L ++ + + +L G E Sbjct: 217 RAGRYNEMVAILFIDLDRFKEVNDTLGHGTGDQLLQVVSERLTACLRSCDTVARLGGDEF 276 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +++L G + + L + + + + + + +++ L Sbjct: 277 VVLLPGITERDCVGDIAAKLLQSLCKPVQLDAREVFTSGSIGISLWPIDGDSVSTLFKNA 336 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 + + + +Q+ L N +R AL++G+L L QP + Sbjct: 337 DTAMYHAKEQGRN-TYRFYTPQMHATSMEQLTLSNDLRYALERGELHLCYQPQVSFETGG 395 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PR 574 G + +L + G++ PD+F+PL L VL + R Sbjct: 396 LIGVEALLRWIHPKLGMIPPDRFIPLAEDTGLIVPIGTWVLHEACRQAMMWVAQGLPSLR 455 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ + + + + + + ++P + LE+TE N + ++ L G Sbjct: 456 VAVNISAKQFRESDFSDTVKAVLQTTGLAPNLLELELTEGMLIENVTQTKLTLQSLKDMG 515 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD-AMIVRSITDLAKAKSLS 693 +AIDDFGTGY++ LK D +KID FVK+I + D A IV ++ L + L+ Sbjct: 516 VTLAIDDFGTGYSSLSYLKHFPLDRLKIDKSFVKEIAEKSGDAAAIVEAVVALGHSLKLT 575 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 V+AE VE Q Q LH LQGY RP Sbjct: 576 VIAEGVEQQDQVDFLHNRKCDELQGYFFSRPLTP 609 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 120/667 (17%), Positives = 239/667 (35%), Gaps = 44/667 (6%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 +R L + + +L + + + I T + Sbjct: 148 IGWVRIGLSQSADLKRFEKIKFSAFAFLLIAVTLAALFATVAARYLTRRLYAIQTVADEV 207 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + + V L M+ + + EKR + + Sbjct: 208 KQGKRSLRVK--LDGVDEAAQLAKRFNIMLDTLVKRENEIVESHQALEQSEKRLNQIMAV 265 Query: 221 AALSVLLLLL-------------CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 + + +++ + F + ++ Sbjct: 266 NHEGIWDWDIKADKVTHNQSWADMIGLDDNLLVHPAQVFFDAVHPDDRERVSRAVGECFK 325 Query: 268 AVSTLCLLNYNQNFLQGV-ETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRW 322 + + F+Q E + V+ + ++ + Sbjct: 326 SK---SHYHMEYRFVQRNTGKEVWVQDRGDVVEWDAEENPLRMVGGFYEVTERKKAEEAI 382 Query: 323 HLQALTDPLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVH 374 A DPLT LPN R L+ +QE + + +D+ + ++ G Sbjct: 383 QNLAFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFIDLDDFKTLNDTLGHDTGDK 442 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----EGRLQHMVNILNS---RQI 426 +R + L ++E + + ++ G E +L+L + + + + + Sbjct: 443 LLRQVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAATHAELVAQKVLRVLNKPY 502 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 ++T F G+QETL+ LL Q+ A + + + Sbjct: 503 LLDSTPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRN-TVRFYDTTMQEVVN 561 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + ++ ++R A+ +L+ QP N + G + ++ G++ P+KF+PL + Sbjct: 562 AKSVMEASMRQAITGQQFVLFYQPQINSNGQIIGAEALVRWRHPQKGLIAPNKFIPLAEE 621 Query: 545 FNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 VL++ + L +VN+ Q ++ + R+ + Sbjct: 622 NGFILSIGRWVLQTACEQLVEWARQPATAQITMAVNVSARQFHQIDLVEEVERIICQTGA 681 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 +PQ + LE+TE + E + ++ L K G ++DDFGTGY++ LKRL D +KI Sbjct: 682 NPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSSLAYLKRLPLDQLKI 741 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+DI+ ++ DA I R++ LAK+ +V+AE VE +Q +L +G + QGYL G Sbjct: 742 DQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGYLFG 801 Query: 723 RPQPLAD 729 RP P+ + Sbjct: 802 RPVPIEE 808 >UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YKOW_BACSU Length = 800 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 121/748 (16%), Positives = 269/748 (35%), Gaps = 25/748 (3%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL---IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFI 58 + +LI I+++ F + + + + PL + + +++ L + + Sbjct: 45 LIGGSLIMGFGIWSMHFVGMMAVHMEMPMEYEFMPLMAAIGASVSGSFVSLYFVSRHILT 104 Query: 59 FGWRGVVPVLCGMFCTNLWNFHLS-FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 + V+ G ++ +S + ++ F V AI + + + L Sbjct: 105 YYRLLTGSVVLGASIASMHYIGMSAISRVMIIYEPILFTVSIIIAIAASFVSLKIFFDLA 164 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + + L + V I + + G + L +TF D + +++ + ++ Sbjct: 165 VKKHSEHLIFYKGV--SSIVMGIGISGMHYTGMLA-ATFHKDMAPPGSHMEVQTFHWSIF 221 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + ++F T ++ S H + ++ +++ + +L L ++ Sbjct: 222 VTLIIFCIQTLLLFSSHADRKFIKQSERIKDNEQRFQSLIVHNIDAIFILSLEGDIISSN 281 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 ++ F L V + + L + ++ L L Sbjct: 282 HAGEEMISKFGFSMHDWRNYTSLKVKRLFEQVKKDKQAMNSDSDLITEKGQFHLNITLIP 341 Query: 298 LISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA----LEQAPEQEAGK- 350 + + + + + + H A D LT LPN R L + +E Sbjct: 342 VEVNQELDSIYVICKDMTKQYKAEKEIHRMAHYDSLTDLPNRRHAISHLTKVLNREHSLH 401 Query: 351 ---SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 L ++ + ++ G + ++ + L ++ +N + +L G E +++L+ Sbjct: 402 YNTVVFFLDLNRFKVINDALGHNVGDQLLQFAAKRLSSVVPDNGFIARLGGDEFIIILTD 461 Query: 408 PET-EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 T G + + + + L + L+ + Sbjct: 462 ANTGTGEADVLARKIIQKFKKPFKIQDHTLVTSVSIGIAISPKDGTDGLELMKKADMAMY 521 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + + + + T ++ +R A++ +L+ QP + ++ G + Sbjct: 522 AAKERNKSK-YRYYSFSIGNKETVKLNQEMVLREAIENDRFVLHYQPQFSVKKQKMTGAE 580 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ + DG + P +F+ + + L +++ K ++N+ Sbjct: 581 ALIRLVTPDGQLRPPGEFIGVAEETGLIIDIGKWIIDEACKQARIWHDKGYDLSVAINIS 640 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 K++ I +Y + PQ + +E+TE N S + L + G RI+ID Sbjct: 641 ARQFQSKDLIPLIKDTLNKYQLPPQLLEVEVTESMTMDNLNHSKKVLSSLTELGIRISID 700 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ LK +KID F+ DI T+ I +I + SL V+AE VE Sbjct: 701 DFGTGHSSLSYLKDFPIHRLKIDKSFIDDIQTHPKSEQITGAIIAMGHQLSLQVIAEGVE 760 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ LL + G +LQG+ RP P Sbjct: 761 NAAQKQLLFEKGCDHLQGFFFSRPIPPE 788 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 105/550 (19%), Positives = 198/550 (36%), Gaps = 21/550 (3%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-LLCTPYENDFIAGYLVPVFF---IIFTL 253 RR + + S ++ +L + I GY F Sbjct: 527 TSLRRAERELMLSAQVFEHGSEAVFITDASHRILRVNPAFEAITGYAAGEVLGLTPDFRC 586 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVR 310 + Y L+V+ + + Sbjct: 587 VSSPGGTSISQRWELAEQTGRWQGEIVCRRRSGEHYYEWSALSVVRHANGSVLYFIGQFS 646 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQEAGKSFCCLRIDNLEFMSR 365 + R A DPLT LPN L + + +D + ++ Sbjct: 647 DISAVKAAEARALRLACFDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRFKNIND 706 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + ++ + R L+ ++ + + + G E +LVL G L+ + L Sbjct: 707 SLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADV 766 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S I + L + F + LL + + + Sbjct: 767 SSPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRHADAALYHAKSRGRN-TYRFFTREID 825 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + ++ + + + +R+AL++G+ L+ QP + G + +L + G+++P +F+ Sbjct: 826 DRVSEYLHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFV 885 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L + V+ + +VNL + + I Sbjct: 886 PIAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSRS-VIEAIDEALA 944 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + P+ + +E+TE + + + +E L G +A+DDFGTGY++ LKR D Sbjct: 945 DSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPID 1004 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F++DI + + +IV +I +A + V+AE VET+ Q L + G +QG Sbjct: 1005 KLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQG 1064 Query: 719 YLIGRPQPLA 728 YL+ RPQP A Sbjct: 1065 YLVSRPQPAA 1074 >UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWM6_METML Length = 651 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 94/639 (14%), Positives = 216/639 (33%), Gaps = 34/639 (5%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 R L L +V +++ + IS++ + + + Sbjct: 5 FRKRISKLDLIVLRIVGIYLAFGLLWIFATDSALFSLISSY----EEFSILNTYKGVAFI 60 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 + +L+ R + + + + + W + + + Sbjct: 61 FVTALLLYSLFRRTLKKQQSIEQSLQASEERWKFALEGSGDGVWDWDIPSDHVFRSARWS 120 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQGVETEY 289 I GY G + L + + + + Sbjct: 121 E--IYGYAENEIIATAVAGRELVHPDDLAILISDVQNYFAGNSNVYISEFRLRCKDGSWK 178 Query: 290 SLA----FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA-- 343 + + ++ + + A D LT LPN Sbjct: 179 WTLARGMTVSKSADGKPLRMIGTHTDITNRKRSEAQVTHLAHYDQLTGLPNRVLFLDRFK 238 Query: 344 ------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + L +D + ++ G + ++ + R L +++++ + ++ Sbjct: 239 QDIKKAQRTGQIVTLMFLDLDKFKEVNDSLGHDIGDMLLKDVARRLENCVRDSDTVARMG 298 Query: 398 GSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++L+ ++ ++ + + ++ H + + + + + ++ L Sbjct: 299 GDEFTIILNDINSQVNIERIAQDILNQLTMPFHLGDEVIHVSTSIGISNYPKDDTEVELL 358 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-- 512 L + ++ + K++ L++ + AL+ +Y QPI Sbjct: 359 LKNADQAMYVAKEQGRNR-YQYFTPVMQEEALKRMRLISDLWGALNDNQFRVYYQPIVEL 417 Query: 513 -NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + ++ G++ P+ F+P+ L + + + Sbjct: 418 ATGAIFKAEALIRWQHPTRGLVGPNDFIPVAEDTGLIVDIGDWLFNEVASQMVKWKQHYP 477 Query: 572 GPRFSVNLMPLTLL--QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + SVN P+ N + I R ++ +S + I+EITE +S + + Sbjct: 478 NLQVSVNKSPVQFRSVHDNCSNWIER-LEQLGLSGENFIVEITEGLLLDARDSVVSQLNA 536 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 + G +IAIDDFGTGY++ L++ D +KID F +I N+ D ++ +I +++ Sbjct: 537 FREAGMKIAIDDFGTGYSSLAYLRKFDIDFVKIDRSFTSNITPNSSDMVLCEAIIEMSHK 596 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + V+AE VET +Q+ LL + QGYL +P + Sbjct: 597 LGMKVIAEGVETDEQRDLLRNADCDFAQGYLYSKPITVD 635 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 97/568 (17%), Positives = 195/568 (34%), Gaps = 36/568 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLVPVFFIIF 251 +R A + ++R A + + + I GY Sbjct: 296 ISERKRTEAALMETKERYALAIQGANDGIWDWNLVNNEIYFSSRWKTILGYSESEVDNCL 355 Query: 252 TLGVGKLRYP------FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 ++ + + + Sbjct: 356 EEWFSRIHPQDLERVKLKLNLHQQGQSSHFEEEYRLRHKNGKYRWVLSRGIAVRNSEGKA 415 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFC 353 + + + AL DPLT LPN Q + Sbjct: 416 YRMAGSLSDISEQRLAQEQLMHDALHDPLTGLPNRTLFMDRLRQVIHHARRHRNYNFAVL 475 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + + + ++ ++ + +L G E +++L Sbjct: 476 FVDLDRFKVINDSLGHLAGDTLLIELAHRFQIGLRPDDTVARLGGDEFVILLDDLLEVEE 535 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + N + D + + L ++ A Sbjct: 536 SIRIAHRIQTLVQQPFIINGQTVFTSASIGIAPKDTHHHKPEHYLRNADIAMYRAKAAGG 595 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 + ++ ++ L +R AL++ +L L QPI + G++ ++ Sbjct: 596 SRHV-LFTSVMHTSALVRLQLETDLRQALERQELRLQYQPILCLNTDQIVGFEALVRWQH 654 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTL 584 G++ P F+ + + L VL+ + + SVNL L Sbjct: 655 PRDGLIAPGHFITVAEETGLIVPIGEWVLQEACRQMQCWHTQFGQVLPLMVSVNLSSKQL 714 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q ++ ++ R+ + PQ + LEITE N E + + +L + ++++DDFGT Sbjct: 715 SQPDLLQQVDRMLAETGLRPQQLKLEITESMILDNTEVARQTLLKLKERQIQLSMDDFGT 774 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L RL D++KID F+ ++ + +VR+I +A + + V+AE +ET+ Q Sbjct: 775 GYSSLNYLHRLPIDLLKIDRSFIHEMDSGEESRELVRAIISIAHSLKMQVIAEGIETRSQ 834 Query: 705 QALLHKLGVQYLQGYLIGRPQ---PLAD 729 LH+LG ++ QGYL P P AD Sbjct: 835 LEQLHELGCEFGQGYLFSTPLDPEPAAD 862 >UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Shewanella RepID=A0KRF8_SHESA Length = 1077 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 112/634 (17%), Positives = 227/634 (35%), Gaps = 31/634 (4%) Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 + LF I + ++ SF KI+ A + ++ + Sbjct: 428 SLLGLYLFSAIFTAAITLWLGRKIIRSFMVKITKIANDMQQMAADPQL-NINIDASGTDE 486 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 + + RMI A R A + + Sbjct: 487 LARMAQAMNRMISERQKANHALSRAAAVFNYSAEGIMVTDADN------HIELINPAFSQ 540 Query: 239 IAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 I GY + + + + A+ + Y + Sbjct: 541 ITGYSLEEVKGRSPSILSSNRHPHHYYTAMWEALHKEGKWEGEIWNKRKDGQVYPEYLAI 600 Query: 296 AVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE----- 347 V+ + + + + + + QA D LT LPN + + + E Sbjct: 601 TVVRNEQGEIIQHIGLFMDISKRKQYEQDLWYQANFDTLTGLPNRKLFNERLQHEIQLAQ 660 Query: 348 ---AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +D ++++ G ++ + + L + +N+ + ++ G E +L+ Sbjct: 661 HDSRKLAILLIDLDQFKYINDVQGHATGDLLLQDVAKRLENIAGKNDFVARIGGDEFVLI 720 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L E ++HM + + + + N + + G + + + L Sbjct: 721 LPRVTNEFAIEHMASRIIETLATPFNLNEREIQISASFGIGVYPEDGLDVSSLTRNTEMA 780 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 Q+ ++ ++ L +R A+ Q + L+ QPI + + Sbjct: 781 MYQAKDAGRN-NFKYFTSGMNQAMFARMELEQRLRRAVAQDEFTLFYQPIVDMKTGQICS 839 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 + ++ D G++ PD+F+ + + L VL + L ++N Sbjct: 840 VEALIRWQDPDLGLIPPDQFIAIAEETGLIEPMGEWVLNQAMHDLRQWQHMGLNLNVAIN 899 Query: 579 LMPLTLLQK---NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 + + + F R+HI+P+ V +EITE +A + +E + G Sbjct: 900 VSSRQCINTRGIGFDQVLQECFNRHHINPRNVHIEITESMLMGDASHCLSTLESIRHLGS 959 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +I IDDFGTGY++ LK+ +IKID FV+ + N +A +V++I + ++ + +V Sbjct: 960 QIYIDDFGTGYSSLSYLKKFPISVIKIDRSFVEHALENCSNANLVKAIVMMGQSLEMELV 1019 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE +ET+ Q L LG Y QGYL+ +P P + Sbjct: 1020 AEGIETEAQWQFLRDLGCHYAQGYLLSKPLPFDE 1053 >UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor, putative n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CE49_ACAM1 Length = 880 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 103/580 (17%), Positives = 197/580 (33%), Gaps = 30/580 (5%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-- 229 +L ++ YL + Q L + + + L + Sbjct: 280 AIYCILQNGLIRSYLIEITQHRRTEQQLRLSEARYAAAAKGANDGLWDWDLHGNTIYFSD 339 Query: 230 ---LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + I F I ++ + L Sbjct: 340 RWKAMLGFSEEEIGASPDEWFNRIHPQDQDRVTEDLSAHLRGDTP--QFECEYRILHSNG 397 Query: 287 TEYS---LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 L + + + + +A D +T LPN + Sbjct: 398 EYLWFKGRGLALRNDQNQAFRIAGSQTDVTAYYSTRAQLEFKAQHDEMTQLPNRVLFMER 457 Query: 344 P---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 +Q + L +D + ++ G + + + + L +++ + + Sbjct: 458 LTHAFRMAKHQQSRLFAVLFLDLDRFKIINDSLGHRVGDQLLIEVSKRLQQCLRKQDTIA 517 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E ++L E H+ + +I + + + Sbjct: 518 RFGGDEFAILLDTVEDADEAIHVAQRILQALKAKISLEEHEVYTSASIGITVSSPDYQAP 577 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL ++ + + Q Q+ L ++ A+ +L L QPI Sbjct: 578 EELLQDSDTAMYRAKKQGKN-CFEVFSSGMRAQVNSQLQLETDLQRAISNNELHLVYQPI 636 Query: 512 RNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G++ +L + G++ P +F+P+ L D VL + +A Sbjct: 637 VDLNTENIVGFEALLRWNHPERGLVPPSEFIPVAEDAGLMVSIDWWVLTEACQQMAHWLN 696 Query: 569 DKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +VN+ LQ ++ + + + P + LEITE SNA + Sbjct: 697 IYPGSTELTINVNISAHQFLQSTFCEKVNAIIQETGMKPHHLKLEITEGVILSNAPNISE 756 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L K G +AIDDFGTGY++ L D++K+D FV + + IVR+I + Sbjct: 757 QLNNLKKLGIHLAIDDFGTGYSSLSYLYAFPLDVLKVDYSFVSRMDQD-NGLAIVRTIVN 815 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 L + ++ VVAE VET+ QQ L ++G ++ QGYL RP Sbjct: 816 LGQNLNMKVVAEGVETKIQQEYLQEMGCEFAQGYLFSRPL 855 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 97/552 (17%), Positives = 181/552 (32%), Gaps = 26/552 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + + VL+ + + I + FT V Sbjct: 931 VQRQLEDEVNLLAKAFGNTSEGVLILDVEGSIRVANYAAQQIIGIDSTDLVGQSFTQFVQ 990 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYH 313 + +S + + + + ++V+ + + Sbjct: 991 MNDGLASEIKQLLSDSQSWTGERELINASQQPCPVWLNVSVMQSANGKVTHYVVVFSDIT 1050 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + A D LT LPN + + L +D + ++ Sbjct: 1051 ERKQTEADLRRLANYDVLTGLPNRSLFSSRLLQSIQAAQQTGEKLALLFLDLDRFKHVND 1110 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 YG M + L + L + G E +++L + + H+ L + Sbjct: 1111 SYGHSMGDALLVEASSRLQSCIASEHMLCRFGGDEFVILLRNANSIDDINHIAERLLEQI 1170 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + + + + + Sbjct: 1171 VAPFKLYGREFYISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGRG-NFQYYSSERN 1229 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN----KEGEGYDEILARLKYDGGIMTPDKF 538 Q + L +R A+++ + LY QP + + G + ++ G + PD F Sbjct: 1230 AQALYHLRLEADLRKAIERQEFELYYQPQIDILRNDKLIGMEALIRWKHPLDGFIRPDIF 1289 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 + + L D VL A + SVN+ + Q + I + Sbjct: 1290 IKVAEACGLIVDIDRWVLRQACVQGAHWAKRYGSTFKLSVNISAVHFRQPDFIEDIQSIL 1349 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + ++ LEITE + ++ +L G +AIDDFGTGY++ L+ + Sbjct: 1350 HETQMPTASLGLEITEGVLMKELHVAKDHLSRLKSLGIEVAIDDFGTGYSSLAYLRHFEV 1409 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 + +KID F+ DI TN D IV SI +LA+ L+VVAE +ET +Q + G +Q Sbjct: 1410 NTLKIDRSFLIDIATNKADQAIVSSIIELARNLKLNVVAEGIETVEQLEQVFSRGCYIIQ 1469 Query: 718 GYLIGRPQPLAD 729 GY +P +AD Sbjct: 1470 GYYFAKPMCVAD 1481 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 19/213 (8%), Positives = 45/213 (21%), Gaps = 10/213 (4%) Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 Q + + G + D P + + + L +I Sbjct: 733 SQINLAGLASGGYVLDILSQVNGIWSDKPFTYPFYVEQHWWLSQGFKGILLLLFSIIALS 792 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 L +Y R I + + + + W + L + Sbjct: 793 LAWYRQRQINTFKQMNQALTESDDRLRQSLRGSDSDLWEWHKNTQAFHLDN--RGAVLGT 850 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY---NQNFLQGVETEYSLAFILAVL 298 + + + L V W ++ + + L + Sbjct: 851 HANEIVVSLAELPVHPQDREKALAQWDSMISGEIDRFEAEYRYQRKDGNWGWLRVRGRPV 910 Query: 299 I-----SFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + + L +L A Sbjct: 911 ARNKHSNEIERVAGIYSDITVQRQLEDEVNLLA 943 >UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE8_9CYAN Length = 990 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 103/552 (18%), Positives = 199/552 (36%), Gaps = 30/552 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 +R A ++R + + +++++ + N I + + Sbjct: 437 ISERKRSEANLKKSQERLKKIVSAISDALIVINI-----NGLIKFVNLAAEVLFDRSESF 491 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRS 315 + YP N L +Q + + L +R Sbjct: 492 LIGYPIGNFL-----LEEDKIELTIVQPKGKLVFVEIRSVEIDWEGEKATLVSLRDITER 546 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRH 366 + + A D LT LPN EQ + L +D+ +F++ Sbjct: 547 KQAEEQLRHSAFYDALTNLPNRALFMDQLEQAITQTKTLNQTSFAVVFLDLDSFKFVNES 606 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NS 423 G ++ + +I L ++ + L +L G E +L E + +V + + Sbjct: 607 LGHIIGDQLLIAIADRLETCLRSGDILARLGGDEFTFLLKDIEQVSQAITVVQNIQHKLT 666 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 ++ L + + +L + + Sbjct: 667 FPFDLSSHQLFSNASLGIALISPDYTYPEEVLRDADIAMYSAKQRGKN-CYAIFNSQMRK 725 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 ++ ++ L +R A +Q D L+Y QPI + G++ ++ G+++P +F+P Sbjct: 726 KSQHRLQLETDLRYAWEQQDFLVYYQPIVCLQTHQIVGFEALIRWQHLTKGLISPYQFIP 785 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLF 597 + + L VL++ L + SVNL + N +I ++ Sbjct: 786 VAEETGLIIELGSWVLKTACHQLKAWTRTNPRMQHLKMSVNLSSRQIQDYNFVKKINQVM 845 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 I+PQ + LEITE N E + Q+ ++++DDFGTGY++ L Sbjct: 846 TETQINPQNLKLEITESILMENPEDVKEKLIQIRSQNIQLSLDDFGTGYSSLSYLHNFPI 905 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 + +KID F+ + N + IV++I LA + V+AE +ET + L L +Y Q Sbjct: 906 NTLKIDRSFIVRMNLNPENTAIVQAIITLAHTLGMDVIAEGIETVEHLKHLQALECEYGQ 965 Query: 718 GYLIGRPQPLAD 729 GYL +P + Sbjct: 966 GYLFSKPVSAIE 977 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 14/222 (6%), Positives = 48/222 (21%), Gaps = 40/222 (18%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 + + M V H ++ + ++ + Sbjct: 301 FLQAIANILAMAVERHRSEEYLHLLERAINSANNGIIITDPHQPDNPIIYF---NTAVEH 357 Query: 239 IAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 GY F G + + + A+S N + + + + Sbjct: 358 STGYPASEIMGKNCRFLQGKDRNQPEINIIRAAISAKKECNVVLRNYRKDGSLFWNELFI 417 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---QEAG 349 + + + + + + ++ + Sbjct: 418 SPVFNNKGKLTNFIGIQKDISERKRSEANLKKS---------------QERLKKIVSAIS 462 Query: 350 KSFCCLRIDNL-EFMS----------RHY--GLMMRVHCIRS 378 + + I+ L +F++ + G + + Sbjct: 463 DALIVININGLIKFVNLAAEVLFDRSESFLIGYPIGNFLLEE 504 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 95/527 (18%), Positives = 201/527 (38%), Gaps = 21/527 (3%) Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST-LCLLNYNQNF 281 +++ + + ++ F+ F L P + + + Sbjct: 371 VAINSASKVSNLILMLLIAIMIIAAFLGFIYCRRSLIMPIYQMVNQLQRPVTEGGQVYPE 430 Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMVRI----YHRSEWLNRRWHLQALTDPLTLLPNF 337 L + + + L R + + + AL DPLT LPN Sbjct: 431 LLDDRRQDEFGLLAYHFNQSKMALDSNNRDLKLQINERKQAEYQLKHLALHDPLTGLPNR 490 Query: 338 RALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 + + + + +DN + ++ G ++ + L ++ Sbjct: 491 LLFQDRLEQAIALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSCTGRK 550 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDG 446 + + +L G E +++ T L I N ++MG + Sbjct: 551 TDTVARLGGDEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMGSSIGITIYPD 610 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + LL Q+ + ++ + + +L + +L + L Sbjct: 611 DAANSEELLRNADIAMYQAKDDGRN-TVRFFTSEMNARLQRNKEVLTDLAESLTKEHFEL 669 Query: 507 YAQPI--RNKEG-EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QP+ ++ G + ++ + G++ PD+F+ + + L VL + + Sbjct: 670 YYQPLFTIDQNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDWVLAQACREI 729 Query: 564 ATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + ++N+ P+ +K++ ++ + ++ +S + + LEITE N + Sbjct: 730 KNFLNAGITVFKVAINISPVQFRRKDLLQHMLMILAQHDVSAELIELEITEGAVMDNVDQ 789 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ ++ LH GF++A+DDFGTGY++ LKR +KID F+ D+ + I + Sbjct: 790 AIETMQALHDAGFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDLENDDDSKSITTA 849 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I ++ + L V+AE VET++Q L Y+QGY GRP P ++ Sbjct: 850 IIQMSHSLGLHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASE 896 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 119/566 (21%), Positives = 225/566 (39%), Gaps = 34/566 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF------IAGYLVP--VFF 248 +R A E++ + ++ + + + + GY + Sbjct: 560 ITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGH 619 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ-GVETEYSLAFILAVL-ISFSVCLL 306 ++ +G+ L + +++ + + ++ + + ++ CLL Sbjct: 620 TVYEIGIWADDKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNEVDCLL 679 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 R + + + A DPLT LPN L + L +D Sbjct: 680 LTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLD 739 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----EGR 413 + + ++ G + ++ I L ++ + + +L G E +++LSG E E + Sbjct: 740 HFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEK 799 Query: 414 LQHMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 ++ + L + + + L + + T LL + ++ Sbjct: 800 VRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGR 859 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLK 527 + ++++ + N +R AL +G+L L+ QP + G + +L Sbjct: 860 NTT-QLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHH 918 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK----GPRFSVNLMPLT 583 G P +F+ ++ + L +L+ A D VN+ P Sbjct: 919 PQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQ 978 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q + GR++R Y + Q + LEITE N E ++ + +L ++G A+DDFG Sbjct: 979 FRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFG 1038 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL D +KID FV+D + DA IVR+I +A++ L+V+AE VE + Sbjct: 1039 TGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTE 1098 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L +LG QGYL RP PL + Sbjct: 1099 QLAFLERLGCHLYQGYLHSRPLPLPE 1124 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 97/553 (17%), Positives = 197/553 (35%), Gaps = 27/553 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 L + + + + ++L+ +L + GY F Sbjct: 445 AQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLTGYTSEEAVGRDPSFLSA 504 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRI 311 + + + ++ + Y ++V+ + + Sbjct: 505 GRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIYPKWMSISVIRGEDGMIRYHVAHFTD 564 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 R H A D LT L N +L+ + + + +D + + Sbjct: 565 VSSERAAEERLHHMAHHDVLTGLLNRLSLKGRLDQALAAARRDGSRVAVLFVDLDRFKVI 624 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + G + + + L +++++ + ++ G E +++LSG E + + L Sbjct: 625 NDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGGDEFVIMLSGVEHTSAVAMVAEKLVF 684 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + L + + E L+ + + Sbjct: 685 SVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGDILMKNADAAMYHAKMAGRN-NFQFFDAK 743 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDK 537 ++ +++ + +R AL + LY QP+ + + ++ + G++ P K Sbjct: 744 MNEAALERLNTEHALRRALANQEFCLYYQPVIDLASNRVASLEALIRWNHPEKGLLLPGK 803 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 F+ + + L VL + + LA G + VN+ + + N+ + Sbjct: 804 FIGIAEETGLIQPLGEWVLWAACRQLADFAAAGISGIKMGVNISAIQMRNGNLPLLARGV 863 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + Y I P+ +I EITE A ++ ++ L+ G +AIDDFGTGY++ L+ Sbjct: 864 IEAYDIDPRNLIFEITESVAMEQPTETVRILDLLNAMGVSVAIDDFGTGYSSLSYLRMFP 923 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 + +K+D FV+ I +I + LA + L VVAE VETQ Q L G + Sbjct: 924 INHLKLDRSFVEQIGEEIDGCVICDATIGLAHSLELKVVAEGVETQAQLDYLRSRGCDMV 983 Query: 717 QGYLIGRPQPLAD 729 QG+L RP P + Sbjct: 984 QGFLFSRPVPADE 996 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 107/578 (18%), Positives = 214/578 (37%), Gaps = 38/578 (6%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL---SWLAALSVLLL-----LLCTPYEN 236 R A RDI+ E+R +++ + Sbjct: 350 VAMRDAFGRINAVWRMVRDISEKRAAEERVQLAAKVFENTVEGIMITDADRRIRSVNRAF 409 Query: 237 DFIAGYL--VPVFFIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAF 293 I GY + L G+ PF W +++ + Y Sbjct: 410 TEITGYTQHEVLGQKTSILSSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWL 469 Query: 294 ILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK 350 + + + + + + R A D LT LPN ++ E Sbjct: 470 AINAVRNSLGEITHYVAIFSDLTERKAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHN 529 Query: 351 SFCCLRID------------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + D + ++ G ++ + +M E L + G Sbjct: 530 AVR----DNQRLALLLLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGG 585 Query: 399 SELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +++L G + + I +N L + + + + L+ Sbjct: 586 DEFIILLPVISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYPDDGRDYETLV 645 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 + + + ++ + + + + + +R AL++ + +L+ QP Sbjct: 646 RNADAAMYHAKSSGRN-SYKFYTADLNARAREILAIESQLRFALERDEFVLHYQPQVEME 704 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + G + ++ G++ P +F+ + + + V+ + L Sbjct: 705 SGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLP 764 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 ++NL L Q ++A ++ + + + A+ +E+TE +A++++ I+ + Sbjct: 765 ELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMK 824 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G R++IDDFGTGY++ LKR +AD +KID FV+DI + D+ I R+I ++AK + Sbjct: 825 NMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLN 884 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + VVAE VET +Q L + G ++QGYLI +P P D Sbjct: 885 MQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADD 922 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 40/159 (25%), Gaps = 14/159 (8%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 L L ++ R E + L W +++ L D Sbjct: 226 RLVDELRAKTLALEADIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQV-IDANP 284 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN----------YNQNFLQGVETEYS 290 +L + + + L + A+ L N + +L + + Sbjct: 285 AFLNLMCYSLDQLKQQNFWSLVAEESEALERFNLDNKVLRFGYCDEFEATYLNRFDNQVP 344 Query: 291 LAFILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQA 326 ++ + + + VR R L A Sbjct: 345 VSVKTVAMRDAFGRINAVWRMVRDISEKRAAEERVQLAA 383 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 107/574 (18%), Positives = 199/574 (34%), Gaps = 36/574 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA--FTLSWLAALSVLLLLLCTPYEND 237 +F ++ + RR + L + + Sbjct: 920 LRIFAARAAAEMARQASDAHIRRQASLLDKARDAIIVRDLDHRITFWNEGAERLYGWTRE 979 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 G + + FL T A + + Sbjct: 980 EATGQSIAELL-------YQDTQEFLRATRATQEQGEWAGEIVQFHRDGRRLDVEGRWTL 1032 Query: 298 LISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------- 347 + +L + + + R A D LT LPN L Sbjct: 1033 IQGEQGQPDAILAIDTDIGQRKATEREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRR 1092 Query: 348 -AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 G + + +DN + ++ G ++ + L ++ + + +L G E ++++ Sbjct: 1093 RQGGALLFIDLDNFKTLNDTLGHDQGDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIE 1152 Query: 407 GPET-----EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQET--LQPLLG 456 G T + + + + F G+ T + LL Sbjct: 1153 GLSTHPGELAMSARTVGEKILAVLATPYVLQGYHYRSTPSIGVAPF-GDGRTSTVGELLK 1211 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE- 515 Q Q+ L + + T + L N +RTAL + +L+ QP ++ Sbjct: 1212 QADLAMYQAKTAGRN-TLRFFDPGMQAVVTARAELENDLRTALAREQFMLHYQPQIDRRG 1270 Query: 516 -GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKG 572 G + ++ G+++P +F+PL + L VL + LA + Sbjct: 1271 SVTGVEALVRWPHPQRGMVSPGEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGH 1330 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VN+ + ++R + LE+TE + E+++ + L Sbjct: 1331 LSMAVNVSSRQFHHEAFVEDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRS 1390 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++DDFGTGY++ LKR+ D +KID FV+D++ + DA IV +I L+++ L Sbjct: 1391 HGVGFSLDDFGTGYSSLSYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGL 1450 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V+AE VET +Q+ L + G + QGY RP P Sbjct: 1451 DVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLP 1484 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 106/601 (17%), Positives = 202/601 (33%), Gaps = 35/601 (5%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNML-FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 D D ++ + L L I + + E+R Sbjct: 400 ADMDDYRWLMGFGRVIRDETSGRPLRVVGLNLDITDRRTTEDALAQSQTHLRASEERLAL 459 Query: 217 LSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA--- 268 + + T + GY + L+ Sbjct: 460 ALDSGNDGLFDWNVTTGKVWYSDRWQTMLGYKPGEIEPHILSWERLVHPDDLHQARTLLT 519 Query: 269 ---VSTLCLLNYNQNFLQGVETEYSLA----FILAVLISFSVCLLYMVRIYHRSEWLNRR 321 + + + + ++ + +R Sbjct: 520 EHFGELSATYSSEHRLRSKSGEYTWVLGRGRVVARDEQGAPLRMVGTSIDITERKASEQR 579 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRV 373 A D LT LPN + EQ + CL +D + ++ G Sbjct: 580 IAYMARHDVLTGLPNRTVFHEHLEQRLAEVRRGRGQAALLCLDLDRFKSINDMLGHPAGD 639 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNN 430 + I L ++ + + +L G E +++S + + + + + + Sbjct: 640 ELLCQIATRLRATVRGGDVVVRLGGDEFAIIVSHLDHARQASVLAQRVIDAVGQPLDLGG 699 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + +G N +T + L ++ A E + ++ Sbjct: 700 HLVTVGISIGIAFAPTNGDTSETLFKNADLALYRAKASARN-TYCFYEAGMDAAVEARMQ 758 Query: 491 LLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L +R A+ G L+ QP+ + G++ ++ G++ PD+F+P + L Sbjct: 759 LEFEMREAITCGSFALHYQPVLRLADHRIVGFEALMRWPHPKRGMIAPDEFIPSAEETGL 818 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 L+ + A+ P R +VN+ + Q + ++ ++P + Sbjct: 819 IVPLGSWALQEACREAASWPD---HLRIAVNVSAVQFQQPGLEQGVMSALAASGLAPHRL 875 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 +LE+TE +AE+ + + +L G RIA+DDFGTGY++ L+R D IKID F+ Sbjct: 876 VLEVTESVLVQDAEAVIACLHRLKSLGVRIALDDFGTGYSSLSYLRRFPFDRIKIDRSFI 935 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +I + A IVR++ +A +V AE VET Q + G +QGYL+ RP P Sbjct: 936 SEIG-DPGAAAIVRAVVGIAMQLGATVTAEGVETTAQLEQVRSEGCMEVQGYLVSRPLPA 994 Query: 728 A 728 Sbjct: 995 D 995 Score = 41.9 bits (98), Expect = 0.096, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 31/162 (19%), Gaps = 11/162 (6%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL---LLLCTPYE 235 + L + ++ A R A E R L+ V + Y Sbjct: 155 IVVAHIELHQGRLTIEAALAERTRSEALIAANEARYRALADALPQMVWVMTSADGSAIYT 214 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSL 291 N+ Y + + + + T Sbjct: 215 NERFRTYYGSIGPQREERTSRNHPADTERMAEEWQRAVTHEHTYAVEGRLRRHDGTYRWH 274 Query: 292 AFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 ++ + V L TD L Sbjct: 275 KLVMVPVRQNGTVVEWLGTALDIEDIVTARSTLEH--TTDLL 314 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 129/745 (17%), Positives = 248/745 (33%), Gaps = 46/745 (6%) Query: 30 FISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN----FHLSFLQ 85 ++ A++ + I + + M+ + R + + G + Sbjct: 317 MLATAAVMALTLIVALYCAIGAMVVAPMLRLQRTLRTLSRGNETLVHSASEDELVRRICE 376 Query: 86 TAVMLGSQTFVVLCA-------CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC 138 V +G + + G +R L +G + Sbjct: 377 VLVQVGDFRLACIAFDMPGQAPRIVATHGGGDVFRAALARADASHLAPAVGAIAERRTVL 436 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM-------LFYYLTRMIV 191 L A + + + + A+ I L + + Sbjct: 437 VDDLGAVPAALRAAAEAAGCRALIAYPLCEGERVLGALTIGAARPGDLDQAGTALLKELA 496 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLLLLC--------TPYENDFIA 240 I +R E ++ VL+ L + I Sbjct: 497 EDLAFGIATQRTAVARREAEVALRLRERAIESSSDGVLIFALGDDGPRIRDVNPAAERIL 556 Query: 241 GYLVPVFFIIFTLGVGKLRY-PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 G + + L A+ + + + + LA + Sbjct: 557 GMARALLVDAPAPALTVFAPGALAELGVALVCGRETHLEVEGERADGSPFWCECALAPVR 616 Query: 300 S-FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + ++ +V+ R QA D LT LPN L+ E Sbjct: 617 AAGDAHVVCVVKDVTERVLYLRELERQAKYDGLTGLPNRYLLDDRLEQAIVAARRHERLL 676 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + +D+ + ++ + G +R L ++++ + + G E +++L Sbjct: 677 GVAFIDLDHFKVVNDNVGHRQGDELLRQAASRLAAVLRDGDTAARQGGDEFVVLLPDLGD 736 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E ++ L + ++ + + + LL Q+ A Sbjct: 737 ERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRDGGDGDTLLKHADIAMYQAKA 796 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 + ++ Q ++ L +R+AL+ G+L L QP + + G + +L Sbjct: 797 AGRN-VVRFFTAEMNIQVRDRLQLEGALRSALENGELHLAFQPQVDGGSGQVIGAEALLR 855 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G + P +F+PL + L VL + + + R +VN+ Sbjct: 856 WQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAGRRLRIAVNVSARQF 915 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++ RI + + P + LE+TE +AE + + +L + G +A+DDFGT Sbjct: 916 RSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGT 975 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+++ L+R D +KID FV+ +V IV +I LA + + V+AE VET Q Sbjct: 976 GYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQ 1035 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + G LQGYL GRP P A+ Sbjct: 1036 QRQLFEFGCDELQGYLFGRPVPAAE 1060 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 94/564 (16%), Positives = 191/564 (33%), Gaps = 29/564 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R I + R + + A + ++ + + GY Sbjct: 486 RDITERQKREERMRLSSRFLEDTNEA---VVITDADARIIE---VNRAFEKLTGYSRQEA 539 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISF 301 + + + T + + ++ + Sbjct: 540 IGQNPRILQSGHYDADFYREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISAVYDQRGR 599 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 + + ++ + D LT LPN +Q + Sbjct: 600 ITHYVGISNDLTATKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEHKVALL 659 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 +D + ++ G + + + + L + + + + G E L+L Sbjct: 660 IFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDEFYLLLGRLTDIDT 719 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + S+ + L + F + E ++ L+ + + Sbjct: 720 AVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAMYHAKKDGG 779 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKE-GEGYDEILARLK 527 + +E + ++ + N +R A++ + LY QP + G + ++ ++ Sbjct: 780 N-SFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQ 838 Query: 528 YDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL 585 + G ++P +F+PL + L VL + R +VNL + Sbjct: 839 PERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFK 898 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + I + + + + + LEITE + ++ + +L G +A+DDFGTG Sbjct: 899 QPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTG 958 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK D +KID FV+D+ T+ D ++ +I LA + + VVAE VE Q Sbjct: 959 YSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQV 1018 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 A L + G QGY RP P + Sbjct: 1019 AFLRQRGCDVFQGYHFSRPLPAKE 1042 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 100/573 (17%), Positives = 192/573 (33%), Gaps = 35/573 (6%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAG 241 ++I +R E+R + A + + +P I Sbjct: 243 QLIRCYLTDITERKRSELALRISEERYALAAEAANDGLWDWHIGNRSVYYSPRWELLIGE 302 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY-----NQNFLQGVETEYSLAFILA 296 + I L + + + + Sbjct: 303 PPGSLQPTIEEWWRRVHPDDLEQLRQNIKEHLFGSRPCFDCEFRIRHRDGSYRWMRSRGK 362 Query: 297 VLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQE 347 L + + + + + AL D +T L N L Q Sbjct: 363 ALRNQKGQPYRMGGSMTDVTEYHLIQEKILHDALHDAMTGLANRVLLIDRLTQAIARRQR 422 Query: 348 AG---KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D + ++ G + + I + L + + + +L G E ++ Sbjct: 423 RPNSLFAVLFLDVDRFKVINDSLGHLAGDQLLIGIGQRLRACTRPEDTIARLGGDEFAIL 482 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD-GNQETLQPLLGQLSW 460 L + + + R + F + +T + LL Sbjct: 483 LEDLSDPAQAMKVAERILMVLGRPFLLEGHEIFTTASIGIA-FPWEDSQTAEDLLRDADT 541 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGE 517 ++ + + + QT + + +R A ++ + L+Y QPI + + Sbjct: 542 AMYRAKSLGKAR-YEVFSMTMRAQTIALMQMETELRRAAEREEFLVYYQPIVDLATLKMV 600 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PR 574 G++ +L + GI++P +F+ + + L V+ + + R Sbjct: 601 GFETLLRWQHPERGIISPGEFMAVAEETGLILPISWWVMAEACRQMQRWAVIFPRSRKLR 660 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 VNL Q ++ + + Q + LE+TE N E ++ +E++ G Sbjct: 661 IGVNLSGRHFQQADLLPNLRSILAETGFPAQRLCLEVTEGILIDNKEVAIATLEEIRAMG 720 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +++DDFGTGY++ L R D +KID F+ + + A IV +I LA + L V Sbjct: 721 IGVSMDDFGTGYSSLSYLHRFPIDTLKIDRTFISALNSEESSATIVHAILMLAHSLRLQV 780 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VAE +ET++Q L LG Y QGY RP Sbjct: 781 VAEGIETREQYRALQALGCNYGQGYFFARPLSA 813 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 98/428 (22%), Positives = 184/428 (42%), Gaps = 17/428 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 + H A D LT LPN + + + L +D + ++ G Sbjct: 1045 RAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLG 1104 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + +++ ++ ++ N+ + +L G E ++L E+ + + S+ Sbjct: 1105 HEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKV 1164 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 ++ + + + G+ E + L+ ++ + E+ + Sbjct: 1165 FAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKEQG--NSYQFYEKGMETAA 1222 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 K++ L +R AL+Q +L LY QP N E + ++ + G++ P +F+PL Sbjct: 1223 VKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLA 1282 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L A +L + + +VN+ L ++++ +I+ + K Sbjct: 1283 EETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETG 1342 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + LEITE A +++ +L + G + AIDDFGTGY++ LK DI+K Sbjct: 1343 LPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVDILK 1402 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ D+V+N DA I++ I LA + L VVAE VETQ Q+ L QG+ + Sbjct: 1403 IDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYL 1462 Query: 722 GRPQPLAD 729 P A+ Sbjct: 1463 SEPLSAAE 1470 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 92/465 (19%), Positives = 185/465 (39%), Gaps = 22/465 (4%) Query: 285 VETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + + F + + S S ++ + + + ++ A D LT LPN Sbjct: 231 DGSSFPVEFTASPICKTNSESSGIVLVFQDISERKKTEQQLTRLAQYDCLTGLPNRALFT 290 Query: 342 QAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 ++ + L +D + ++ G + ++ + + L E + Sbjct: 291 SLLSQAISRSDRRKNKLALLFLDLDRFKQVNDSLGHDVGDLLLQQVAQRLQLATLEGGTV 350 Query: 394 YQLPGSELLLVLSGPETEGR-LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 +L G E +++L +E + + + + + G+ + Sbjct: 351 SRLGGDEFMVILEEVNSESHKAAKLAQKMITSLDAPFNILGREVLISTSIGIALCSGSTQ 410 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL + ++ + Q +K + L N +R AL + + L+ Q Sbjct: 411 CIDSLLKRADMAMYRAKEQGRN-NFQFYTAELQQQASKSIELENRLRHALQRKEFFLHYQ 469 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + G + +L +++P++F+P+ + L VL L Sbjct: 470 PQVDTNSGQIIGLEALLRWQPDGQALISPEEFIPVAEEAGLIVPIGEWVLREACSQLHRW 529 Query: 567 PCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + +VNL L ++ + ++ + + P + LEITE + + Sbjct: 530 HRSGLLSPTVKMAVNLSVRQLEHTSLLSTLTQILQETGLKPSQLELEITETAVMKDPDLV 589 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +H G ++++DDFGTGY++ LK L ++KID F+ DI D I+ SI Sbjct: 590 VNILHSIHAMGIQLSLDDFGTGYSSLRYLKLLPLHVLKIDRSFINDIGGKQRDQAILESI 649 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L++ L+VVAE VETQ+Q L + +QGY I +P+ A Sbjct: 650 IYLSRNLDLTVVAEGVETQEQLDFLSRFNCHSIQGYYISKPKSAA 694 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 92/430 (21%), Positives = 174/430 (40%), Gaps = 18/430 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + QA D LT LPN + + +D + ++ Sbjct: 438 QRQDKEEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLIND 497 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + ++ + L +++ + + + G E ++L E+ + + Sbjct: 498 TLGHSIGDELLKEVALRLQDCLRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDAL 557 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 L + + + + + LL +S ++ Sbjct: 558 KAAFVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTC-QLYNPTMN 616 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 +Q +L N++R ALD+ + +L+ QP N E G + ++ + G+++P F+ Sbjct: 617 --AKEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFI 674 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L VL + + ++NL Q N+ + ++ + Sbjct: 675 PIAEETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIE 734 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++PQ + LEITE A N E + + L G IA+DDFGTGY++ LK+L + Sbjct: 735 STGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFN 794 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F++D+ + D I+ ++ L K L VVAE V+ ++Q LL L + +QG Sbjct: 795 TLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQG 854 Query: 719 YLIGRPQPLA 728 YL RP + Sbjct: 855 YLFSRPLSVD 864 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 101/520 (19%), Positives = 195/520 (37%), Gaps = 26/520 (5%) Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 L + + + + +I L +T A++T + Sbjct: 209 LTGYAPEELLGTFNLTYNTLIDP---DDLPQLTAAITTAIATQQVYTVEYRIRTKSGQLK 265 Query: 290 SLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + ++ L + + + + A D LT LPN E Sbjct: 266 WFLEQGNGIFDKQGQALGLEGFITDISKLKQAETQLRHDAFYDKLTGLPNRSLFMDRLEY 325 Query: 347 ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + L +D + ++ G + I L ++E++ L +L Sbjct: 326 CIKRVKRHPDQIFAVLFLDLDRFKVVNDSLGHAAGDQLLVEIAERLTACVRESDTLARLG 385 Query: 398 GSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++L G + + + + N + + + + L Sbjct: 386 GDEFTVLLEGIKDLSDALLVCGRIQQSLNCPFNLNGREVLITVSTGVALSTMGYDDPEQL 445 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L ++ A + + + Q+ L +R A+++ + L+ QPI + Sbjct: 446 LHNADAAMYRAKALGKAQ-WEVFTADMHSNASAQLQLEVDLRRAIERQEFQLHYQPIFHL 504 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 E G++ +L G+++P +F+P+ + L VL+ + L+ Sbjct: 505 ETAAIVGFEALLRWHHPLRGLISPVEFIPVAEETGLILPISWWVLQEACRQLSRWQTQFP 564 Query: 572 ---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 SVN + + +I + ++PQ++ LEITE NAE++ + Sbjct: 565 LEVPLFVSVNFSSKQFSEVGLIPQIEDILHTTGLAPQSLKLEITESAIMENAEATAAKLL 624 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 ++ G ++ IDDFGTGY++ L R DI+K+D FV + + + IV +IT L++ Sbjct: 625 EIKALGIQLGIDDFGTGYSSLSYLHRFPVDILKVDRSFVSAM-DSHENLQIVHTITMLSQ 683 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VAE VET +Q A L + QY QGY +P + Sbjct: 684 NLGMRAVAEGVETAEQAAQLRAMNCQYAQGYFFSKPIDAS 723 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 106/568 (18%), Positives = 188/568 (33%), Gaps = 48/568 (8%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFFII 250 R E+R A +V + + + + G+ Sbjct: 405 ITELRATETALRNSEERFSIAMTAAPFAVAITRVEDGRFVEVNDKYELHFGWKREELIGK 464 Query: 251 FTLGVGKLRYPFLNLTWAV---STLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLL 306 ++ P W +L++ + ++ + +L Sbjct: 465 TSVETNLWPDPESRQRWLEMLRQHGSVLDFETLGCERNGAVRQVSLSSRYIDIDGEKHVL 524 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 V + R A D LT LPN A + + +D Sbjct: 525 TFVHDITDRKEAQARIEYLAHHDALTGLPNRVLFRDRFALATAWAERAHAKVALLFVDLD 584 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + + ++ G + ++ + L ++E + + +L G E L+ L+ + Sbjct: 585 HFKTINDTLGHPVGDGLLQGVALRLRECLRETDTVSRLGGDEFLIALTDIRDPQAINSAT 644 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + +R L + + E LL Q+ Sbjct: 645 AKIFDTLTRPFELEGHELTNTMSIGIAIWPDDGEDFDTLLKNADTAMYQAKRAGRN-TWR 703 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 E ++ +Q+ L + +AL+ + LL+ QP N G + +L + Sbjct: 704 FYTEQMNANAVEQLQLRTALHSALENDEFLLHYQPQINLASGHVVGVEALLRWHWDKREL 763 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAG 591 + PD+F+P + L VL +VNL + + ++ Sbjct: 764 VPPDRFIPAAEESGLIVPIGDWVLREACMQAVRWTRQGLPELTIAVNLSAVQFRRGDLER 823 Query: 592 RIIRLFKRYHISPQA-----------VILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 ++R + P V + ES + + +L G R++ID Sbjct: 824 SVVRALSLSGLDPARLELELTESLLLV-----------DTESVIETLRRLKSLGVRLSID 872 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR D +KID FV+DI T+ DA IVR+I +A L V+AE VE Sbjct: 873 DFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPDDAAIVRAIVSMAHTLKLQVIAEGVE 932 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ LH QGY RP P Sbjct: 933 SEDIDRFLHIFNCDEAQGYHYARPMPGD 960 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 110/583 (18%), Positives = 202/583 (34%), Gaps = 40/583 (6%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL------LCTPYE 235 L R ++ A + ++ A +W L + Sbjct: 71 LLPRRIRYLLRAKLAFDELHKSRTMLYNAQRIARLGNWEFDLETNVFTCSEESCRIFGIR 130 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + + + ++ + + E ++ Sbjct: 131 DHRQGKSHRALMRRVHPEDRVTVKKAIFQAFRTGV---GYCMDHRIVLDDGVERIVSQHA 187 Query: 296 ---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS- 351 + + L+ V R A D LT LPN E+ EQ + Sbjct: 188 ELLSADDGRTSRLVGTVHDITERTLAEERIRYLAHHDTLTALPNRFQFEERMEQALAFAQ 247 Query: 352 -------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL----------- 393 L +D+ + ++ G ++ L+ ++ ++ L Sbjct: 248 RNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAGRLMKCLRRSDTLTHASREDASPF 307 Query: 394 -YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 ++ G E ++L+ + + S++ + +G F + E Sbjct: 308 ISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGGHEVFVGASIGISLFPSDGE 367 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 LL + ++ +++ L N +R AL + + L Q Sbjct: 368 DCDQLLRNADTAMYHAKELGRN-TYQYYSGSMNAMALERLTLENNLRWALKRNEFRLCYQ 426 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + +L+ + ++ PD F+PL + L A VL + T Sbjct: 427 PQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGLIASIGEWVLWNACAQAVTW 486 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + R +VNL L + +A + ++ + + P + LEITE SN E + Sbjct: 487 LHEGLPPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSHLELEITEGVFMSNEEDAAV 546 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 I L K G R ++DDFGTGY++ RL R D +KID FV+DI + A + +I Sbjct: 547 VIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSFVRDISADPAAAGLTAAIIA 606 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+ L+V+AE VET +Q A L G +QG+L +P Sbjct: 607 MARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLNPD 649 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 113/595 (18%), Positives = 204/595 (34%), Gaps = 37/595 (6%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL- 228 L L +M+ S S E+ + +++ Sbjct: 329 LGLLRVANKAADYSEADGKMLASLAEYLAPLLAARLESRRAEELVARVLETIDEGFIIID 388 Query: 229 ----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN------ 278 ++ AGY + V L + + Sbjct: 389 HEFKIVSANRAYAESAGYPLAEVIGRHCYQVSHQIDQPCYLNGEDCAVQHVFNTGEPHTA 448 Query: 279 -QNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + L + +V + + H A DPLT Sbjct: 449 VHTHYTAAGEPLYVETKAYPLERDDLGTVRRAIEVVTDITDKKNREQEIHRLAFYDPLTR 508 Query: 334 LPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN R EQ + L +DN + ++ G + + L Sbjct: 509 LPNRRLFFDRLEQAFSASARSGQHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERLQE 568 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQ-----HMVNIL---NSRQIHWNNTGLDMGY 437 ++ N+ + + G E +++L+ E + + + + +G Sbjct: 569 AVRANDTISRQGGDEFMVLLNNLSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHIGV 628 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F G+ L + Q+ + + + + + L+ +R Sbjct: 629 SIGLSLFLGHDTPADELFKRADAAMYQAKHAGRNQ-VRFFDPEMQAELEQASALVVDLRQ 687 Query: 498 ALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 A+ QG L+ QP + G + +L + G ++P +F+PL + NL V Sbjct: 688 AIWQGQFQLHYQPQTANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRWV 747 Query: 556 LESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 LE LA + +VN+ Q I R+ P+ + LE+TE Sbjct: 748 LEEACGQLAAWADLPAAGNCKLAVNVSARQFRQPEFVAEIRRILAATGADPKLLKLELTE 807 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + ++ +++L G ++DDFGTGY++ +LKRL + +KID FV+D+ ++ Sbjct: 808 SIVMTELADTVSKMQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSD 867 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D IV +I + + + V+AE VET++Q A L + G QGYL RP P A Sbjct: 868 PHDDAIVETIIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAA 922 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 110/599 (18%), Positives = 203/599 (33%), Gaps = 32/599 (5%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF--- 215 + + + L + L T +I + A + EK Sbjct: 17 ATLLVLSPLFLCVVMAPRYYSVALTAGFTFLIAAFCVAMGRYTITAQKLHESEKLFRTFA 76 Query: 216 -----TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP-FLNLTWAV 269 W++A L+ T + I+GY F L + Sbjct: 77 DFIYDWELWISAEGSLIH---TSPACERISGYATTAFKNDSDLLRRIIHPEDLQRYDRCE 133 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQA 326 + ++ + + L + +R + A Sbjct: 134 NEATPGFREFRMIRRDGQLRWVELLSRQLRNEEGKDLGRRLTIRDITGKKAREHEIRQIA 193 Query: 327 LTDPLTLLPNFRALE----QAP----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 +D LT LPN AL+ +A A + L +D+ + ++ G + Sbjct: 194 YSDALTGLPNRLALKMDMDKALAKASRNTAMVAVLMLDLDDFKQINDTTGHAKGDEMLLL 253 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR----QIHWNNTGLD 434 + L + E + L +L G E ++VL+ ++ + + + Sbjct: 254 LTSRLREQLGEKDSLARLGGDEFVVVLNEIDSATCAAKKTEKILASLRDNPFDLVVAKVF 313 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 F N + LL ++ + + +T ++ L Sbjct: 314 ASASIGIALFPQNGRDAETLLKHADMAMYEAKNVGRN-TYRFFSDELHRRTIERHKLEVG 372 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R A+ + + L QP + + ++ + G++ P F+P+ + L Sbjct: 373 LRRAVRKKEFFLVYQPQVDLGTGRIVALEALVRWQHPEAGVLLPSTFIPVAEETGLIHIM 432 Query: 552 DLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 +L + R +VN Q ++ RI ++ + P + LE Sbjct: 433 GEWILRTACHQAMQWQRMGLPPMRIAVNFSARQFRQPDLVERIEQILLESGLPPHHLELE 492 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE N ES++ + L +IAIDDFGTGY++ LK D +KI FV+DI Sbjct: 493 ITESVFMENLESAIETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRLKIAQDFVRDI 552 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + DA I+ +I +A + V+AE VET +Q L + G +QG+ RP + Sbjct: 553 PDDEDDATIIETIMAMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFYFARPMQAEE 611 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 91/439 (20%), Positives = 180/439 (41%), Gaps = 18/439 (4%) Query: 308 MVRIYHRSEW--LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRI 357 + R D LT LPN + + + + + Sbjct: 440 IEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLFIDL 499 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + + R L + + + +L G E ++L + + Sbjct: 500 DHFKKINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIILDQLNNIENVILI 559 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + L + + G+ + + LL ++ Sbjct: 560 AQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRD-NY 618 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 ++ + ++ + L +R A+D+ L++Y QP ++ G + ++ + G Sbjct: 619 RFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENG 678 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 +++P F+P+ + L VL R SVN+ QK++ Sbjct: 679 MISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLV 738 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + R+ + +SP+ + LEITE ++ + ++ + +LH G +++IDDFGTGY++ Sbjct: 739 PMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLA 798 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ +KID FV+D++ + DA I ++ DLA+ +L+V+AE +E Q Q L Sbjct: 799 YLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLD 858 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G Y QGYL RP P + Sbjct: 859 RGCGYGQGYLFSRPIPAHE 877 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 114/564 (20%), Positives = 200/564 (35%), Gaps = 28/564 (4%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---I 249 RR + + + V +L + GY Sbjct: 152 IASDISERRRMEHDLRIAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAIGQTP 211 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLL 306 + + + ++ + + ++ + + Sbjct: 212 GMLKSGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTHYV 271 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + H A DPLT +PN R L + + ID Sbjct: 272 STFSDISNLKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGALLIIDID 331 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR----- 413 + + ++ G + H + + R L ++E + + G E +++L +E Sbjct: 332 HFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEELGSEQEGAAVQ 391 Query: 414 LQHMVNIL---NSRQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + +R N T F G ++T+ LL Q ++ Sbjct: 392 AEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQADIALYKAKDAG 451 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLK 527 A+ + + ++ L +R AL + + +LY QP + G + +L Sbjct: 452 RN-AIRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAVRRLIGAEALLRWQP 510 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLL 585 ++ P+ F+PL + L + VL+ L D + SVN+ Sbjct: 511 PGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFLSVNVSARQFR 570 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + ++ R+ +P+ + LE+TE N E + ++ L G R ++DDFGTG Sbjct: 571 QADFVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGVRFSLDDFGTG 630 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 YA+ LKR + +K+D F++DI N DA IVR+I + LSVVAE VE Q Sbjct: 631 YASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVVAEGVEDDLQH 690 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 A L K QGYL GRP D Sbjct: 691 AYLVKHECSLFQGYLFGRPMSFDD 714 Score = 46.1 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 7/138 (5%), Positives = 27/138 (19%), Gaps = 19/138 (13%) Query: 205 APSLGKEKRAFTLSWLAALSV------LLLLLCTPYENDFIAGYLVPVFFIIFTLGV--- 255 E + + + + + +F + + Sbjct: 30 LQLSIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACAR 89 Query: 256 -------GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 G F + + +++ + ++ ++VL Sbjct: 90 LYSCEPDGTPPAGFGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQGY 149 Query: 306 LYMVRIYHRSEWLNRRWH 323 L + + Sbjct: 150 LGIASDISERRRMEHDLR 167 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 103/577 (17%), Positives = 198/577 (34%), Gaps = 33/577 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN-----DFI 239 R + RR A E R + + + + + + Sbjct: 349 GSRRSLRGLTLDVTAHRRAAAALKESENRYQDVVNHISEVIFRTDAEGRWTLLNPAWEAL 408 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSLAFIL 295 G+ V ++ + L + + ++ Sbjct: 409 TGFKVEETLGQPMCAFVDPEDRDDAQSFCSTLLEGGTHAQSEEIRLRTHDGSHRWVSIYA 468 Query: 296 AVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + ++ + A D LT LPN L Sbjct: 469 SARFDEDGHIMATFGTMMDISDRKEAEEEIRRLAFFDGLTGLPNRTLLHDRLGQALANTA 528 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +DN + ++ G + + + R + ++E + L +L G E +++ Sbjct: 529 RTRHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENSVREADTLARLGGDEFVII 588 Query: 405 LSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 L+ + + L + F G ++ +L Sbjct: 589 LNDLHPDPARAATEAEAVGRKLINLLREPFQLAGQNRHVTPSIGATLFSGRSLGVEEVLK 648 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--K 514 Q ++ + + + + L N +R ALD+ + QP + Sbjct: 649 QADLAMYRAKNAGRN-TVRFYDPELHRAVEARFELENELRHALDEDRFSVVYQPQVDAEG 707 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKG 572 G + +L G ++P +F+P+ Q L +VL + L + Sbjct: 708 RVIGAELLLRWEHAQRGAISPAEFIPVAEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRD 767 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 SVN+ + + + + + LE+TE ++ + +I++L Sbjct: 768 LTLSVNISARQFRDPHFVPHLREILQETGAPGDRLKLELTESMLLEEIDTVVAHIDELRA 827 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G A+DDFGTGY++ LK+L +KID FV+D++ + DA I + + +LA+ L Sbjct: 828 LGVEFALDDFGTGYSSLAYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLDL 887 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET +Q+A L LG ++ QG+L G P LAD Sbjct: 888 DVIAEGVETVEQRAFLFGLGCRHFQGFLYGYPGDLAD 924 >UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYF3_METFK Length = 747 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 124/737 (16%), Positives = 258/737 (35%), Gaps = 33/737 (4%) Query: 24 LIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFC----TNLWNF 79 ++ ++ + A+++ + ++ A + + +F W + + Sbjct: 1 MLGVAVGMLVSAVVNVAILYQAQLVTLQHVLPALLFAWLVNALGVLLLLPLLLNITWAEI 60 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 + + A V AI + +Y + V + + + I Sbjct: 61 RSFWQRRARFSLLALLAVTVEWAIFQLVPDYADQYMWFAFLVLPLVVLISMRMGITGVSM 120 Query: 140 MYLVGSFFDFPLKISTFFGDAD-----AIFTVVDLLSLFTAVLIYNMLFYYLTRMI-VSP 193 + L S + D ++ + L++ + V + + + Sbjct: 121 VVLALSIVALMSAQVDYQAGLDHAGYQPVWALWVLMATLSIVGMLIAALQSSREVTERAL 180 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 ++ +R I + L + ++ D + LV + + Sbjct: 181 RHSETKFRAVIENAQDGIVSIDEDGRLVEFNHAAEVMFGYRREDVLGKMLVDILIPLSLR 240 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIY 312 + + L VS + + L+ TE+ + + L + LL R Sbjct: 241 DAHRRGHE-RYLASGVSKMLDRRLELSALRADGTEFPVEVTITSLKEQGLPLLTGFFRDL 299 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 + A D LT LPN R L + + +DN + ++ Sbjct: 300 TERRKVESEIRNLAFYDALTTLPNRRLLLDRLQQAIAASVRHGRHGAVLFIDLDNFKALN 359 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVN 419 G + + + R L ++ + + +L G E ++VL + + + + Sbjct: 360 DSRGHDIGDLLLVEVARRLRQCVRNEDTVARLGGDEFVIVLEDLSLNLEQAIAQTRQVAQ 419 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + F+GN +++ LL + ++ A L Sbjct: 420 KVLEIINHPYQLGEIEHHNSSSIGIVLFNGNFVSMEELLKRSDTAMYEAKAAGRN-TLRF 478 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMT 534 + + ++V + +R A+ Q L L+ Q + + G + +L D G++ Sbjct: 479 FDPAMQAALERRVDMELQLRLAIVQKQLRLFCQVQVDAERKVFGAEILLRWQHPDHGLLA 538 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGR 592 P +F+ + L VL + L + +VN+ + Sbjct: 539 PKEFVGIAEDSGLIVSIGHWVLYNACLQLKDWEARPGFDSLQLAVNVSARQFRHADFVDE 598 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + ++ + P + LE+TE N ++ + L + G R ++DDFGTGY++ L Sbjct: 599 VRKILQSTGADPSLLKLELTESVVLDNIADAVAKMNALRELGVRFSMDDFGTGYSSLAYL 658 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KRL +KID FV++I + DA +V++I ++ L V+AE VET+ Q LL G Sbjct: 659 KRLPLSQVKIDRSFVREIAEDASDAAMVQAILAMSNTLGLKVIAEGVETEVQFELLQSYG 718 Query: 713 VQYLQGYLIGRPQPLAD 729 ++ QGYL +P + D Sbjct: 719 CRFFQGYLFAKPMLIQD 735 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 107/566 (18%), Positives = 206/566 (36%), Gaps = 20/566 (3%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + F + + +S + + A L + Sbjct: 259 LSATAFEDMLSLTISDVTSLKRREASFRLLFDNNPMPMWVFDAATTRFLKVNDAAVRHYG 318 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 F + + + + + L + N L+ +E + Sbjct: 319 FSRSAFLGMKLPEIWPADEREAHL--HALQQAGDNYLSDRNWRHLKADGSEIEIIAFGRR 376 Query: 298 L-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-------G 349 + S L + R A D LT LPN ++ + Sbjct: 377 VAFERSDGFLVAIVDVTERRKAEARIAHMAHHDGLTNLPNRSFYQERLQHALEARPAECH 436 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + C+ +D + ++ +G + ++ + L ++ + +L G E +VL Sbjct: 437 VAVLCVDLDLFKNVNDSFGHPVGDRLLQLVAERLRLEVRGANMVARLGGDEFAIVLVSVV 496 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + R + + +G G+ + + LL ++ Sbjct: 497 SPNEASDFAARVIERLSVPYDVDGLEVVIGASIGIALSPGDGDNGEDLLRNADMALYRAK 556 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 E+ + Q K+ + +R A +G LY QP+ + G++ +L Sbjct: 557 ESGGG-NHHFFEKEMDRQAQKRRDMEIDLRYAFAKGQFELYYQPLVDVARDRVAGFEALL 615 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 + G+++P F+P+ L VL AT P + + +VNL P+ Sbjct: 616 RWRHPERGMISPADFIPVAEDIGLIVGLGEWVLRQACAEAATWPSE---IKIAVNLSPVQ 672 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +N+ +I + +SP+ + LEITE + E+++ + Q+ G RI++DDFG Sbjct: 673 FRSRNLVQAVIGALAQSGLSPRRLELEITESVFLAETEANLATLHQMRDLGVRISMDDFG 732 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L+ D IKID FV+D+ IVR+I L ++ +++ AE VETQ Sbjct: 733 TGYSSLSYLRSFPFDKIKIDRSFVQDLAQRPDCLAIVRAIAGLGRSLNITTTAEGVETQA 792 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + G +QG+L +P + Sbjct: 793 QLDWLREEGCNEVQGFLFSPARPAGE 818 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 97/551 (17%), Positives = 200/551 (36%), Gaps = 30/551 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 ++ E R + + ++++ V G Sbjct: 153 ITERKKTEIALQQSEHRLSQIITTISDGLIVVDYEG----------TVKFVNAATEKLFG 202 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-LLYMVRIYHRS 315 + + ++ + + ++ + L +R Sbjct: 203 RTKQELIDQKLGIPFVDGDRTEIYIRHSNGHLIIAEIRISEITWKQENAYLISLRDITDR 262 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRH 366 +++ + A DPLT L N L + + + L +D+ + ++ Sbjct: 263 KYITDQLQYHATHDPLTDLFNRNFLLEKLQNLLEKNKNQSGKSFAILFLDLDDFKVVNDS 322 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G + + I + L + +N L + G E ++L + ++S Sbjct: 323 LGHLAGDQLLIMITKRLQNSLGQNHTLARFGGDEFTILLENIKETQDAIIAAQKIHSNLT 382 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + N + + + +L QS + + Sbjct: 383 YPYNLNGQQIFINTSIGIALSSPDYTHPYEILRDADIAMYQSKKQGKGAC-TLFNQQMHE 441 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 Q K++ + +R A++Q + + + QPI + + G++ ++ G+++P +F+P Sbjct: 442 QAVKRLQMEIELRQAIEQQEFIAHYQPIFSLTTGKLIGFEALIRWQHSQKGLISPAEFIP 501 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLF 597 + + L +L L + SVNL L + I ++ Sbjct: 502 IAEETGLIVPMGKWILLEACTQLKQWQEQYDHEHILQISVNLSSKQLRDPYLVQEIDKIL 561 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 I+PQ + +EITE N +++M + QL + ++ +DDFGTGY++ L R Sbjct: 562 THTEINPQNLKIEITESLLMENFDTAMNILLQLQERNTQLCLDDFGTGYSSLSYLHRFPV 621 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 DI+KID FV + + + I+R+I LA + ++ V+AE +ET+ Q + L L + Q Sbjct: 622 DILKIDRSFVMQMHSGNNNLEIIRTIITLAHSLNMRVIAEGIETESQLSQLKSLNCEQGQ 681 Query: 718 GYLIGRPQPLA 728 GYL +P P Sbjct: 682 GYLFSKPVPQE 692 Score = 48.4 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 12/149 (8%), Positives = 32/149 (21%), Gaps = 7/149 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 F ++ +S + ++ A + W +L + D Sbjct: 17 FLSISEDTISLQKIENGIKQSQAQLKSILDSLKDIVWSVSLPSFQYIYLNKTAEDIYGIS 76 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSLAFILAVL 298 + F N+ + ++ L + V+ Sbjct: 77 ISEFFKNSNLWLEMVHPEDRSNIKQLARNWDQSDINKDIEYRIIRPDGQIRWLHNRIQVI 136 Query: 299 ISFS---VCLLYMVRIYHRSEWLNRRWHL 324 + V L ++ + Sbjct: 137 YNEQKKPVRLDGIITDITERKKTEIALQQ 165 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 113/581 (19%), Positives = 201/581 (34%), Gaps = 35/581 (6%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + Y I A R A ++ A SW + ++ L P Sbjct: 116 ILAYRVNYIFRSSRAFRDLRTSEARLSKAQQLARMGSWEWNPLLDVVQLSEPCRQIMGID 175 Query: 242 Y------LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI- 294 + + + LG LR L L L + + L Sbjct: 176 SATQVRDIASLIALAHPLGRPYLRKGLDALMERGRPLSLDCQTATADEEDKRFIHLEAEE 235 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------Q 346 + ++ + + A D LT LPN ++ Sbjct: 236 HRDASGRITLVSGTIQDITSRKLAEEKIRYLAYYDSLTGLPNRVLFKEHLRRALATSEQH 295 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL------------Y 394 + + L +D + ++ G ++ + L ++ + + Sbjct: 296 KRQLAIMLLDLDRFKGINDSLGHDAGDLLLQQVADRLRLRVRPYDTVSRDSEEQRDSLIA 355 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E ++L G T + + N + + + + L Sbjct: 356 RLGGDEFTILLEGITTPEAAARVARRVIEALEAPFALNGNEVFISCSIGISIYPHDGTDL 415 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ + + ++ + ++++L +R A ++ + L+ QP Sbjct: 416 EILVKNADVAMYCAKDLG-CSTFQFYTQEMNSVSLQRLILETHLRKAFEKEEFFLHYQPQ 474 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + + + G+++P F+PL + L D VL ++ K L Sbjct: 475 IDCVTNRIIGLEALARWNNPELGLVSPGSFIPLAEETGLIIALDRWVLATVCKQLEAWQA 534 Query: 569 DKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R +VNL L+ N+ I ++ R + + LEITE NAE + + Sbjct: 535 AGIPLVRVAVNLSARHFLKANLNKTIQQIRSRGAAARDHLDLEITEGMLMENAEEVVSVL 594 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L + G I+IDDFGTGY++ L RL +KID F+ N A +V +I LA Sbjct: 595 GMLQETGVNISIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQSGDNVESASVVTAIIALA 654 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VVAE VET Q L + G + +QGYL RP P Sbjct: 655 HSLGKEVVAEGVETSTQLQFLKENGCRVIQGYLFSRPLPED 695 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 96/564 (17%), Positives = 196/564 (34%), Gaps = 27/564 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 Y + + R E A + ++ T + I GY Sbjct: 452 LYAIGGITTDISDKVKAEREAEVTQQVFESAAEAILIYNPDGKVI----TNSSFNRITGY 507 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS-- 300 + + L+ + + ++ L S Sbjct: 508 DDKKARLFALSILKDHPEIDATLSKTGR----WQGESIRRKANGEPLPIWLSISALSSTK 563 Query: 301 -FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + ++ A D LT LPN + Sbjct: 564 TEQSSYVAVFSDISELKEAEQKLEKLAHYDNLTSLPNRTLFYDRIESSLARAARNGKKTA 623 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + ID + ++ ++G + R + ++ + + +L G E ++LS + Sbjct: 624 LLFVDIDRFKQVNDNHGHHTGDQLLVEAARRISAHIRLGDTVARLGGDEFTVILSELDGL 683 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 +Q + + ++ + + + + LL Sbjct: 684 DPVQDIARRIQKSLRDPFRLDDKEIFSSASIGIAMYPDDGRNAESLLKHADVAMYHVKER 743 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILAR 525 L ++ ++ Q + L + ++TA++ L + QP N E + ++ Sbjct: 744 GRNDIL-FFDKAINEQAEARAQLEDNLKTAINTQQLFMVYQPRFNISGTEILSAEALIRW 802 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL 584 + G ++P F+PL L VL + + + SVNL L Sbjct: 803 KHPEQGFISPGDFIPLAESCGLIVELGRWVLMQACQAAQEWNENTGQNTPVSVNLSARQL 862 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++ I + + P + LEITE + E+ + +E + G R+++DDFGT Sbjct: 863 HDSSLLIDIENALNQTGLDPSLLELEITETMVIQDMETVISRLEAIRTIGVRLSVDDFGT 922 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL +KID F+ D+ ++ +V+++ ++ + +L+VVAE VET+ Q Sbjct: 923 GYSSLIYLKRLPVSTVKIDKSFIDDVPGSSGSENLVKAVISMSHSLALNVVAEGVETEAQ 982 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 + L + +QGYL+ +P Sbjct: 983 LSFLTENHCDEIQGYLLAKPDSAE 1006 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 108/561 (19%), Positives = 210/561 (37%), Gaps = 27/561 (4%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--LLLCTPYENDFIAGYLVPVF--FII 250 + + + + + +R L A + L + + I + ++ Sbjct: 20 SVRKSYYPQLQDRIMELERFHALLDRARELIFLVDAQNLHIIDVNAIVCSTLEASKESLV 79 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-LQGVETEYSLAFILAVL-ISFSVCLLYM 308 + L + + ++ + ++ L F+L L + + Sbjct: 80 HSEITQWLPHELIERMQRLAQGVEDSIMVEMGIENSGGVVPLEFVLQYLSFGEDDYFVIL 139 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNL 360 + H A DPLT L N + L + + +DN Sbjct: 140 GKDISERRHAESTIHTLAFFDPLTHLANRQLLHDRMAQALAKSQRHHKVGALLMIDLDNF 199 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-----RLQ 415 + ++ G + + + + + +++E + L ++ G E +++L G E + Sbjct: 200 KALNDTKGHHIGDELLIQVAQRIQTIVREGDTLARISGDEFVVLLEGLAHEESKAAQEAE 259 Query: 416 HMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 L + F+G ++ + LL Q Q+ Sbjct: 260 KFATRVKYLLNEPYELLGYEHTCSSSIGIALFNGQPKSKETLLKQADIAMYQAKEKGRNR 319 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDG 530 + + ++ + + + +R AL + +L+L+ QP N + G + +L Sbjct: 320 -ICFYDPLMQENIEHKTTMEHELRMALSKEELILFYQPQVNLEGKIVGVEALLRWNHPQK 378 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKN 588 G++ P+ F+PL + L VL + L+ D S+N+ + + Sbjct: 379 GLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEAS 438 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++ LE+TE + ++ IE L G ++DDFGTGY++ Sbjct: 439 FYETVANAIALSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSS 498 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL D +KID FV+DI + DAMIV++I ++A L V+AE VE ++Q L Sbjct: 499 LSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFL 558 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + G QGYL G+P P + Sbjct: 559 MENGCGLFQGYLFGKPMPPEE 579 >UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUW0_DESOH Length = 764 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 108/735 (14%), Positives = 230/735 (31%), Gaps = 34/735 (4%) Query: 24 LIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSF 83 + + I FL + + + + G V +L +F T L Sbjct: 19 FLMAFGAYVIWSAICYVGYFLGLTKVPLYILSAGVAGSFIVNILLYLIFRTGLNKKFQDK 78 Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 T + + TF ++ + + + I + Sbjct: 79 SLTLIQMVIATFWIMVVVYYAYEARSAVLLVYMVVLVFGLFRLRIRQFLFLSIFALVNFS 138 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 F + IF +V L + + + Y+T + S A Sbjct: 139 AVIFVLYKLQPGYINVRVDIFNIVVLAFILPWFSV---VGGYITNLRASISRAFTTIELL 195 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 +S + +L + L F + + Sbjct: 196 TNNIEDIVFVVDLDLNYTYVSPSVKILRGYEPEAVMKQALSDSFAPSSLDLAMRTLSEAV 255 Query: 264 NLTWAVSTLCLLNYNQNF--LQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWL 318 L + T + + T + + +V +L + R Sbjct: 256 ALGKSGGTEYNKSRTLQLEIKKKDGTTVWTETKFSFVRDKNKQTVGILGVSRDITERRLA 315 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + A D LT LPN Q + + + +D + ++ G Sbjct: 316 EEKIRYLATHDNLTELPNRTLFGQMLGRAIKFAQRYQRQFAVLFIDLDRFKIINDTMGHD 375 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQL----------PGSELLLVLSGPETEGRLQHMVNI 420 ++ I ++ + + +L G E ++++ ++ + Sbjct: 376 AGDQLLKEIASRFRQSLRAVDVVGRLNEKDSVVGRLGGDEFVVLIEEVTNLSQVATVAQK 435 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + + + + + E + L+ + + Sbjct: 436 ILNTAIKPMVLLGEECRVTASIGISVYPDDGEDERTLMKKADMAMYFAKEEGKN-NFQFY 494 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + ++ + +R AL++ +L L Q + G + +L G++ Sbjct: 495 SQNTHSPAFERFFVEAELRHALERNELYLDYQAKLDFKTGAITGSEALLRWRNPGLGLVA 554 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +FLP+ + L V+++ +VNL L+ + I Sbjct: 555 PTQFLPVAEETGLIVPIGRWVMKTACAQNVAWQRQGLPPVTVAVNLSLRQLMDDKLIEDI 614 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + ++P + LEITE + + ++ G RIA+DDFGTGY++ ++K Sbjct: 615 RTALEASGMAPNLLELEITESIVMHKPAPLIELLARIKSLGVRIALDDFGTGYSSLAQIK 674 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L D +K+D F++++ N D I+ ++ + +A SL+V+AE VET Q L + Sbjct: 675 HLPVDTLKVDRSFIRNLQQNPDDREIIEAVIAMGRALSLNVIAEGVETLAQDTYLREHIC 734 Query: 714 QYLQGYLIGRPQPLA 728 +QG+ +P Sbjct: 735 DEMQGFYFSKPVAPD 749 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 100/562 (17%), Positives = 202/562 (35%), Gaps = 34/562 (6%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R A + + + L + +A F G K Sbjct: 137 RLGNAQRIARLGNWEWDLKSNEIYWSEQLYHMLWLRRGVAKPSFRGFISRLPHGERKDFM 196 Query: 261 PFLN-LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSE 316 ++ L +N + Q + ++ V + + V Sbjct: 197 GWIQGLRHGAKEEQRGGWNHSLNQADGSRLNVQHQAEVFYDENGAAKVVSGTVVDVTELT 256 Query: 317 WLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYG 368 + A D LT L N A E+A + + L +DN + ++ G Sbjct: 257 QAQDQILQLAHFDSLTGLANRNAFRKRVELAMERAKQYGHLGAVLFLDLDNFKRINDTLG 316 Query: 369 LMMRVHCIRSICRTLLPLMQENE--------------KLYQLPGSELLLVLSGPETEGRL 414 + ++ + R L +++ ++ + +L G E ++L Sbjct: 317 HSIGDQLLQEVARRLTDIVRGSDSICGTNFNHAIDDNLISRLGGDEFTVLLPEIGKIKDA 376 Query: 415 QHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 +H + + I+ + + + F + E + LL Sbjct: 377 EHAARRVLNSIGDIINLSGHDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRAGKN 436 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + ++ +++ L + +R A+D +L + QP + G + +L Sbjct: 437 D-YELFVNSMNVVAKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSA 495 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 + G+++P +F+P+ + L + VL + + D + +VN+ ++ Sbjct: 496 ELGMVSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQ 555 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + ++ + + LEITE + E ++ + +L G +AIDDFGTGY+ Sbjct: 556 SLDKLVSKVLLETGLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYS 615 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR D +KID F+ + T DA + ++I +A L+V+AE VE Q Sbjct: 616 SLSYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEF 675 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + + +QGY RP +D Sbjct: 676 LRQHHCEEMQGYYFSRPLIASD 697 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 118/575 (20%), Positives = 218/575 (37%), Gaps = 39/575 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--------------LLCTPYE 235 I + A + + E R T+ + ++L+ + Sbjct: 324 ITNLRQAISDREQAFSDIQISEARLRTIFDASPDALLISDAQGAITMANSRVEEVLGYMA 383 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 D I + + + R ++ L L L+ +E + L Sbjct: 384 EDLIGQSIEALVPKSVNSAHSEHRSAYIEAPD--RRLMLGGRTIKALRKDGSECEVEINL 441 Query: 296 AVLISFSVCLLYMV-RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 + + + ++ R + + D LT LPN L Sbjct: 442 SRVDTDQGVMIASALRDISERRRAEGKIAELSFFDHLTGLPNRTLLMDRMKLAMTASYRD 501 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + +DN + ++ G + +R I L+ ++E++ + +L G E L++L Sbjct: 502 GKHCALLFIDLDNFKALNETLGHEIGDQLLRDIAPRLVASVREDDTVARLGGDEFLVLLV 561 Query: 407 GP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 E +++ + + S+ NN F G+ LL Q Sbjct: 562 DLARTESEAANQVEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFGHVV-ADDLLKQS 620 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEG 516 ++ A ++ + + K+ + +R L + LL+ QP N Sbjct: 621 DLAMYKAKAEGGA-SIHFFDPKMEEAVIKRAKIEADLRQGLIKKQFLLHYQPQIFSNGRM 679 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPR 574 G + ++ G++ P F+PL + L + VLE+ K LA + Sbjct: 680 TGVEALVRWQHPVRGLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLT 739 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ Q I + + +P+ + LE+TE N + + + L G Sbjct: 740 VAVNVSVQQFHQPEFVDHIQEVIRVTGANPERLKLELTESMLAENVQDIIKKMFALKADG 799 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++DDFGTGY++ LK+L D +KID FV+D++T+ DA I ++I +LA++ LSV Sbjct: 800 IGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSV 859 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET+ Q+ L G QGY RP P+ + Sbjct: 860 IAEGVETEAQRNFLETSGCHSCQGYFFSRPLPIEE 894 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 105/569 (18%), Positives = 189/569 (33%), Gaps = 23/569 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 F R + + + + E ++ + L L Sbjct: 246 GIAGFVSTGRDVTDRIRDEQTRGQLLEIL---EATTDFVAIIEGDGRLRYLNRAGRAVLG 302 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFL-NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + I + L E ++ ++ Sbjct: 303 LTATEDVSSRHIAQCHPEWATHRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLA 362 Query: 298 LIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 + R + + QA D LT LPN LE Sbjct: 363 HGGANEMPEFFSTIARDITERKHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARS 422 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 S L IDN + ++ G +R + L ++ + + + G E +VL Sbjct: 423 HKLASVLFLDIDNFKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLG 482 Query: 407 GPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + +++ + + + + + + + + + LL Sbjct: 483 DLSHVDNIPAILHKVRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMY 542 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 +S A ++ + + + L +R ALD+G+ L+ QP + G + Sbjct: 543 RSKASGRNR-YQFYAPEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVE 601 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNL 579 +L G++ P F+PL+ L VL + R SVN+ Sbjct: 602 ALLRWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNV 661 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + + ++ ++ + + P + LEITE A + ++ + L G R+AI Sbjct: 662 SARQFREDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAI 721 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR D +KID F++D + A I + L L VVAE V Sbjct: 722 DDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGV 781 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET +Q A L + +QG+ RP P Sbjct: 782 ETAEQLAFLRRRACDLIQGFHFSRPLPAD 810 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 120/804 (14%), Positives = 258/804 (32%), Gaps = 96/804 (11%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 + L+ + + + + ++ + + + W + G+ Sbjct: 191 RWLELSLFAVLAFL-------TSLVAFHGWTSSSFEDIPLGYLMYLFVTWAAIRLGRHGV 243 Query: 72 FCTNLWNFHLSFLQTAVMLGSQ--------------TFVVLCACAILRWQLGTRWRYGLT 117 L L +G + +L + R G Sbjct: 244 TLVLLLTAVQGVLGALDGVGFFAGDIHSGLANFWLYMISLSLVGVVLESTIRQHRRDGDA 303 Query: 118 SRYVWQRLFWLGLVTPIGIKC----------------SMYLVGSFFDFPLKISTFFGDAD 161 R RL + P+GI + + S F + G+ Sbjct: 304 LRESESRLHAILDHAPVGIWLVGKDGRYQFVNKRFCDATGIPESAFLATTHLPDLMGEQI 363 Query: 162 A---------------IFTVVDLLSLFTAVLIYNMLFYYLTRM--------------IVS 192 A + V+ L L L + R + Sbjct: 364 AAACLASDQACLSQDEPYVSVETLPLVDGKLHQLEVTKAQLRDSNGEVIGAIGISVDVTG 423 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC------TPYENDFIAGYLVPV 246 + A+ R A + W +S + L + +D I + Sbjct: 424 RNQAEEALRESEARWSFALEGGGDCVWDWNVSNNEVSLSKGGKGMFGFADDEIGNDMSEW 483 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA----FILAVLISFS 302 + + +L + + + + ++ + Sbjct: 484 NARVHPEDISRLLSRISDFFHSKA--DRFSAEYRVRCKDDSWKWILTRGMVAHRSTDGRV 541 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 ++ + QA D LT LPN R EQ ++ + Sbjct: 542 TRMIGTHTDLSERKLAEETIRRQANYDSLTQLPNRRLFRDRLEQTIRLAKRDQSSFALML 601 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D+ + ++ G + + + ++E++ + ++ G E +++L + Sbjct: 602 IDLDHFKEVNDTMGHDAGDFLLVDAAQRIQHCVRESDTVARMGGDEFVVILPDVNDPDNI 661 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + + + + ++++ LL + Sbjct: 662 ERIAQNIITKLAAPFVLGEEKAFISASIGITLYPSDADSMETLLKNADQAMYVAKHLGRN 721 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 + ++ K++ L+N +R AL L ++ QPI + + ++ L Sbjct: 722 R-MSYFTPVLQENAQKRMRLVNDLRDALSSNQLRVFYQPIVELATGDIHKAEALIRWLHP 780 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQK 587 G+++P +F+PL + + VL + + KG + SVN P+ Sbjct: 781 TRGMVSPSEFIPLAEETGMIIEIGDWVLRQAMHQVKRLQASHHKGFQISVNKSPVQFHND 840 Query: 588 N-I-AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 N + A + ++ + ++++EITE + + + G ++AIDDFGTG Sbjct: 841 NPLKAAEWLGELEQNGLLASSLVVEITEGVLLDDDGNVKDRLLASRDAGIQVAIDDFGTG 900 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK+ D +KID FV ++ + D + +I +A L V+AE VET+QQ+ Sbjct: 901 YSSLAYLKKFDIDYLKIDQTFVNNLGNQSDDMALCEAIIVMAHKLGLKVIAEGVETEQQR 960 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 LL + G Y QG+L + P + Sbjct: 961 DLLKQAGCDYAQGFLFSKAIPAEE 984 Score = 61.2 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 68/291 (23%), Gaps = 25/291 (8%) Query: 40 SYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLC 99 + I W+P V L+ L G + + G L + L + + + Sbjct: 40 AKISPVWLPSGVGLAALIAGGRKYWPGIFIGALAAYLVIWRSVPLSFFIASSNVLEALTA 99 Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 + + WL I L + L + Sbjct: 100 VWLLSLIKTFDSGFKQPRD------YLWLIFAGSIAA----MLAATIGVVTLVFANVLPI 149 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFY-YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 AD L+ L +L P + F + Sbjct: 150 ADIFHAWGYW---VMGNLLGIALGTPFLLIWRKQPSRWINKEQSRWLELS-----LFAVL 201 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 V + D GYL+ +F + +G+ + L AV + Sbjct: 202 AFLTSLVAFHGWTSSSFEDIPLGYLMYLFVTWAAIRLGRHGVTLVLLLTAVQGVLGALDG 261 Query: 279 QNFLQGVETE----YSLAFILAVLISFS--VCLLYMVRIYHRSEWLNRRWH 323 F G + L I L+ + R R H Sbjct: 262 VGFFAGDIHSGLANFWLYMISLSLVGVVLESTIRQHRRDGDALRESESRLH 312 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 28/325 (8%), Positives = 73/325 (22%), Gaps = 32/325 (9%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN 78 + ++ ++ + + +F +P+ + + ++ + G +W Sbjct: 120 LWLIFAGSIAAMLAATIGV-VTLVFANVLPIADIFHAWGYWVMGNLLGIALGTPFLLIWR 178 Query: 79 FHLS------FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 S + + L + + + ++ + W + Sbjct: 179 KQPSRWINKEQSRWLELSLFAVLAFLTSLVAFHGWTSSSFEDIPLGYLMYLFVTWAAIRL 238 Query: 133 PIGIKCSMYLVGSFFDFP--LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 + L+ + L FF L + + L+ +L Sbjct: 239 GRHGVTLVLLLTAVQGVLGALDGVGFFAGDIHSGLANFWLYMISLSLVGVVL-------- 290 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND-----FIAGYLVP 245 RRD E R + A + + L+ Y+ G Sbjct: 291 ---ESTIRQHRRDGDALRESESRLHAILDHAPVGIWLVGKDGRYQFVNKRFCDATGIPES 347 Query: 246 VFFII----FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI---LAVL 298 F +G + +S + + L L Sbjct: 348 AFLATTHLPDLMGEQIAAACLASDQACLSQDEPYVSVETLPLVDGKLHQLEVTKAQLRDS 407 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + Sbjct: 408 NGEVIGAIGISVDVTGRNQAEEALR 432 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 114/587 (19%), Positives = 209/587 (35%), Gaps = 54/587 (9%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 F L+R I A E + + + D Sbjct: 241 PHFIVLSRDITDRKNA-------EHALRESESLMRAIVDNTPV--------EYWARDLEG 285 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV-----------ETEY 289 ++ ++ G + P + N+ +G Sbjct: 286 RCIMENALVVEHWGSLLGKRPEDSGVSPDELAVWQENNRRVYEGEVIEAEVEYQVGGQTR 345 Query: 290 SLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 ++A + ++ ++ + + H A D LT LPN R + E Sbjct: 346 IFNNVVAPIKVDGQTIGIVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHA 405 Query: 348 --------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + + +DN +F++ +G + + + + L +++ + +L G Sbjct: 406 LIGSARRKSHGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGD 465 Query: 400 ELLLVLSGPETEG----RLQHMVNILNSR---QIHW------NNTGLDMGYGAAWGRFDG 446 E +++L + G + + + + ++ + FD Sbjct: 466 EFVVILEDIDGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDD 525 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 T + LL + Q+ A L + + T + L +R A+D+ L Sbjct: 526 TMVTAKELLRRADTAMYQAKAAGRN-TLRFFDPEMQAAVTHRAALETELRKAIDEQQFHL 584 Query: 507 YAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 Q + G + +L G + P F+PL + L VL + + LA Sbjct: 585 CFQVQMDQSGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLA 644 Query: 565 THPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 G +VN+ Q ++ L + + LE+TE + E+ Sbjct: 645 AWSQQPETSGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEA 704 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + +L + G R ++DDFGTGY++ LKRL + +KID FV+D++T+ DA I + Sbjct: 705 IIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAET 764 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I L L V+AE VET Q L +G + QGYL GRP PL + Sbjct: 765 IVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLE 811 >UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2P9_BACS4 Length = 696 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 103/500 (20%), Positives = 205/500 (41%), Gaps = 16/500 (3%) Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 P F I+ +R F NL L+ +G + + Sbjct: 187 PFFTIVHPDEHDYVRSRFENLLENPDKPQKLDVRLRHKEGNWRTVHVIANNRMDDPHIEG 246 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLR 356 ++ ++ H A D LT LPN R E+ E + + + Sbjct: 247 VIINYHDVTEMREAQQKIHHMAYHDYLTDLPNRRYFEEQLEAELQDAKTNRSKLAVLFID 306 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 ID +F++ G + ++ I L+ L+ E + + ++ G E ++++ E ++ Sbjct: 307 IDRFKFINDTLGHHVGDKALKEIAEMLVSLVSEKDLIARMAGDEFMILVPHIEALDYVKE 366 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + R I +++ L + + + E + +L ++ + Sbjct: 367 LADSILKRMESPIVFDHYELFVTGSIGISTYPESGEDISVILKNADLAMYKAKET-KENS 425 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 + + + K L N +R A+ + LY QP + + G + ++ Sbjct: 426 FEFFTPEMEENSYKNFALQNDLRRAITNNEFELYYQPKVSASTEKVVGVEALIRWNHPTL 485 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G+++P F+P+ L V +++ K + S+N + +LQK + Sbjct: 486 GMVSPGHFIPIAEDTGLIVPIGEWVFDAVCKQVKRWENTGFPPLVVSLNFSAIQMLQKGL 545 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ L ++ + + +E+TE + + +E L + G IAIDDFGTGY++ Sbjct: 546 VTKVKNLLEKNQVEGHWIEVEMTESLILEHDNDILNKLEGLKQLGIHIAIDDFGTGYSSL 605 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+ + + IK+D F+ DI T+ + I+ I L+ ++ VVAE VE ++Q +L Sbjct: 606 SYLKKYKFNTIKLDKSFINDIHTSADNQAIITFIIQLSNQLNMKVVAEGVEIKEQHDILQ 665 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 KL LQG+ RP+P+ + Sbjct: 666 KLNCDELQGFYFSRPKPVKE 685 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 106/562 (18%), Positives = 192/562 (34%), Gaps = 39/562 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLL---LLLCTPYENDFIAGYLVP-------- 245 R I + +R + + + L +I Y + Sbjct: 389 ITERERAIEELSEQYRRFDAALNNMSQGLCMLDSSLRVIVCNRRYIEMYGLSPDVVKPGI 448 Query: 246 VFFIIFTLGVGKLRYPFLNLTWA----VSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 I +P V L + + L Sbjct: 449 SMREIMDHSCELGIHPDTTGAKLYADYVERLREGEHTLHRHLSDGRIIKLNHK----RME 504 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQ----EAGKSFC 353 + R A D LT LPN + Q + Sbjct: 505 LGGWVVTYEDVTERHKAQARVAHMARHDSLTDLPNRTLFREKMGEGLNQVAIAGGAMAVL 564 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 C +DN + ++ G +R + L + E++ + +L G E ++ GP+ Sbjct: 565 CFDLDNFKTVNDRLGHAAGDRLLRWVAARLKENVGEHDTVARLGGDEFAVLQRGPQ-PQS 623 Query: 414 LQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + + +G + L+ Q+ A Sbjct: 624 AEKLARRLVEIIGHPPPLESQSIHVGVSVGIAIAPDHGLDADELMKCADLALYQAKARGR 683 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 A E + + + L + +R AL+ + L QP + E G++ +L Sbjct: 684 G-AYQLFEPEMEEEARSRHALEHNLRGALEAREFHLVFQPQVRLESSELTGFEALLRWKH 742 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G ++P +F+P+ + L VL + A+ +VNL P+ + Sbjct: 743 PSRGFVSPAEFIPIAEENGLIVPIGEWVLRTACATAASW----PDVTVAVNLSPVQFRAR 798 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 +A + + PQ + LE+TE ++E+++ + QL G R+++DDFG GY+ Sbjct: 799 GLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATIEILHQLRALGVRVSLDDFGVGYS 858 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L++ D IKID FV + + IVR+I L + AE VET++Q Sbjct: 859 SLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEGVETEEQLDF 918 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 + + G +QGY GRP P A+ Sbjct: 919 VRECGCTAVQGYYFGRPCPAAE 940 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 134/638 (21%), Positives = 219/638 (34%), Gaps = 33/638 (5%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + T+ +V R + P S ++ L S L Sbjct: 408 QLAKTATHVIPRRV--SELFPCTAHLSKRRAHAYVGHRLVDSRGQAIGQLFVLFSRPLHE 465 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA--FTLSWLAALSVLLLLL 230 + +F + A RR + + L Sbjct: 466 TAFITSTLQIFASRVAAELERQSADAHIRRQASLLDKAQDAIMVRGLDDAIRYWNKGAER 525 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 ++ D + G + F T V N L+ T Sbjct: 526 LYGWKADEVTGRSTEMLLYGD-------PTAFRENTRKVIAHSEWNGEITQLRKDGTALV 578 Query: 291 L---AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 + +L +L + + + H A DPLT LPN L + Sbjct: 579 VEAHWTLLRDENDQPDAILAINTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHA 638 Query: 348 AGK------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +DN + ++ G M ++ I + L +++ + L ++ G E Sbjct: 639 MQVRHGQVGALLLIDLDNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEF 698 Query: 402 LLVLSGPETE-----GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 ++VL G + + + R + F+ TL Sbjct: 699 VIVLEGLSASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDE 758 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L + Q+ AH AL + + + L +R AL G L+ Q + Sbjct: 759 LRKRADLAMYQAKAHGRN-ALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVD 817 Query: 514 KE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--D 569 G + +L G + P F+PL + L L VL+ L Sbjct: 818 ARGCVSGAEALLRWQHPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPH 877 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ Q + A +++ +R P+ + LE+TE N + ++ + Sbjct: 878 MARLSLAVNVSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSA 937 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G ++DDFGTGY++ LKRL D IKID FV+D++ + DA I RSI L ++ Sbjct: 938 LKAHGIGFSLDDFGTGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQS 997 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +L VVAE VET Q A L + G Q QGYL RPQP Sbjct: 998 LNLEVVAEGVETDAQHAFLAEHGCQAYQGYLFNRPQPA 1035 Score = 44.6 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 11/131 (8%), Positives = 27/131 (20%), Gaps = 19/131 (14%) Query: 228 LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 ++ + I GY + G R + A+ + Sbjct: 54 AIVFVNDAFEHITGYRRDEVLGKSVRLLHGPLTDRAEVRRIGEALENQRPVRSELVNYSK 113 Query: 285 VETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + L + + + + + R R + + N Sbjct: 114 HGEPFWLELDVVPVTDANGYYTHCVAVERDVTRRKEADLELARL----------NRAL-- 161 Query: 342 QAPEQEAGKSF 352 K+ Sbjct: 162 -RVRSACNKAL 171 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 99/566 (17%), Positives = 195/566 (34%), Gaps = 27/566 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF--TLSWLAALSVLLLLLCTPYENDFIA 240 F + + A+ R ++ Y + Sbjct: 573 FSGVLTDLTDRLQAEERLRLAAQVFDSTQEGVMITDARRRIVSVNRAFTTLLGYTETEVL 632 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI- 299 G R + + + L + ++ + Sbjct: 633 GQT-----PRMLSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRD 687 Query: 300 --SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + + R A DPLT LPN + Sbjct: 688 PHGQVTHYVGVFTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRR 747 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ YG + ++ + + L +++++ L +L G E L++ Sbjct: 748 LAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHDLR 807 Query: 410 TEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + L S + +G + + T Q LL ++ Sbjct: 808 HDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRA 867 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + ++ +++ + +R AL G LLL+ QP + G + + Sbjct: 868 KGDGRG-VYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEAL 926 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 + + G++ P +F+P+ L VL + +VN+ P Sbjct: 927 VRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSP 986 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q ++A +++++ + P + LE+TE ++ +++L G +AIDD Sbjct: 987 RQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDD 1046 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR D++KID F+ DI + D I +I + + + V+AE VET Sbjct: 1047 FGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVET 1106 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPL 727 +Q A L + QG+L RP P Sbjct: 1107 AEQLAFLQQRNCDRYQGFLRSRPLPA 1132 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 15/184 (8%), Positives = 45/184 (24%), Gaps = 17/184 (9%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 G+ L + + +L A L ++ A+ + Sbjct: 6 GGATLILLLGTAWLVAGPQPASWFTAIQTLLCASLAGWLI----------RRAARAQEQA 55 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 + A + A ++ ++ L I G V + + Sbjct: 56 EQAHKRVADVVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDITHPDDLA 115 Query: 263 LNLTW----AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRS 315 +L + + +L+ + + +++ + +V+ Sbjct: 116 ADLDKVADLLAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQFISVVQDITAV 175 Query: 316 EWLN 319 + Sbjct: 176 KQAE 179 Score = 44.6 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 21/267 (7%), Positives = 46/267 (17%), Gaps = 20/267 (7%) Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 L L F+ I+ + + + V R L + Sbjct: 342 ALAASERHLRAVVAALPDLIFLFDADGVIVDLWASQQDKLLMPREQVIGRAIADLLPPSL 401 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 ++ + + + + + + R I + Sbjct: 402 TATALHHIA----RVLAEDAAQIFEYTLPLPDGEHGFEMRMARAGSREVLAIARDITAER 457 Query: 195 FAQILWRRDIAPSL-------GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 A+ +R A ++ + L ND F Sbjct: 458 DARAALQRSEASLRLAVDGSGDGLWDWDLITDKISFGAAYARLLRYPGNDLARD-----F 512 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISFSVC 304 L + ++ Sbjct: 513 RFRERLHPDDRDRSIAAVRNSIEYGTPFVATYRMRCFDGEYRWFQGRGMCHRDAHGTPQR 572 Query: 305 LLYMVRIYHRSEWLNRRWHLQAL-TDP 330 ++ R L A D Sbjct: 573 FSGVLTDLTDRLQAEERLRLAAQVFDS 599 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 125/682 (18%), Positives = 227/682 (33%), Gaps = 31/682 (4%) Query: 78 NFHLSFLQTAVMLGSQTFVVL----CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 L ++ A + + + + L R +L + Sbjct: 217 AHLLGWVYAAFRMRDVLASLYGDQPAGLYLSIYDGTQPSAESLLYRSSEPKLRDVVSANE 276 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + S P + F +A + L+ L +R + Sbjct: 277 YLVVGGHDWTLSMTAQPDFKARFGHNAKLLIACTGAGLSLLLALLAWSLASGRSRAMRLA 336 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---II 250 R A +L + +L GY Sbjct: 337 SKMTAEVRESEAELRIAAVAFDSLEGMMVTDADGTILRVNSAFTKCTGYTADDVIGRNPR 396 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLY 307 F ++ + + + Y + + + Sbjct: 397 LLSSGRHDAAFFRDMWETIHRVGGWQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHYVG 456 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + + A D LT LPN L + + + +DN Sbjct: 457 THYDITERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDLDN 516 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRL 414 + ++ G + + LL ++E + + ++ G E ++VLS E Sbjct: 517 FKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAASET 576 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + SR + T F G++ ++ LL Q +S Sbjct: 577 EGAAEKVLTALSRPYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDLAMYKSKESGRN 636 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NK-EGEGYDEILARLKYD 529 A+ + + ++ L +R A+D+ LL++ Q N G + ++ Sbjct: 637 -AICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEALVRWQHPQ 695 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQK 587 G++ P +F+PL + L +VL++ + LA D+ +VN+ L + Sbjct: 696 HGLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQLREN 755 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ R P + LE+TE N E + + L G ++DDFG GY+ Sbjct: 756 SFVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGVGYS 815 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL +KID FV+D++ + DA+I R+I LA++ L V+AE VETQ Q+ Sbjct: 816 SLSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQRQF 875 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G QGYL RP P+ D Sbjct: 876 LADAGCHAYQGYLFCRPLPIED 897 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 121/733 (16%), Positives = 253/733 (34%), Gaps = 37/733 (5%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFH 80 + +I + + + W + + GWR V Sbjct: 36 MIAVIACAGALYAFQRHAHPTVLPIWFGAVLAVC-----GWRTAATVRRNARPPRRTASA 90 Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM 140 + ++ + L Q L + W G +T ++ + Sbjct: 91 PAMRNLIAEATLTVVCLMSVPSWLLSQTTGTTYAILVCLLTG--ILWAGCLTLATVRAAA 148 Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 + + + I + + D ++ L A+ + + + Q L Sbjct: 149 MVYVATGAAIVVIGLLWANQDFEHLMLASLFPLGALTAMRSVDTQAKMFLDNQRQQQSLT 208 Query: 201 RRD----IAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFIIF 251 ++ + +E+ + L + + +D I G + Sbjct: 209 KQSDLIGLLLKDYEEQTSDWLWETDSSLRYTNPSDRFVEALGRPSDAIRGATLGSLLQDE 268 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 L + + + + + Sbjct: 269 EATGN--GAACLQVRACAEARQPFRDIVVPFTRAGEMRWWSISGRPVYDETGTFLGYRGV 326 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------KSFCCLRIDNLEF 362 ++ R A D LT LPN + ++ Q + L +D + Sbjct: 327 CSDVTATKDAELRIAHLAHHDALTGLPNRAFMSESLHQALRDPDRACLAVLSLDLDGFKA 386 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ YG + S+ L + + + + G E +++ + ++ + L Sbjct: 387 VNDRYGHPGGDALLTSVAERLQNEVSGGDIVARFGGDEFVVLNVAFTSPSEVEDLARRLI 446 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S + +N + +G + T + LL ++ E Sbjct: 447 ESLSTPVPLDNESVTIGVSIGIAFAPTDGRTAEELLKNADAALYRAKTAGRG-TFRFFEP 505 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + + + L+ +R AL + +L L QP G + +L + G+++P Sbjct: 506 EMDRKLQARQRLVQDLRNALTRDELRLDYQPFVKSETGVISGCEALLRWRHPERGMISPV 565 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 +F+PL + L + V++ + A+ P R SVN+ P+ +++ I+ Sbjct: 566 EFIPLAEESGLIVPIGMWVIQQACREAASWPSTY---RISVNVSPVQFRSRDLPQVILAA 622 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++P + +E+TE +A++++ + Q+ G R+A+DDFGTGY++ L+R Sbjct: 623 LTSSGLAPARLEVEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSSLSYLRRFP 682 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D IKID FV+++ T +IV++I D+A+ ++V AE VET Q L + G + L Sbjct: 683 FDKIKIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRLRQTGCEEL 742 Query: 717 QGYLIGRPQPLAD 729 QG+L RP+P + Sbjct: 743 QGFLYSRPRPANE 755 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 132/742 (17%), Positives = 245/742 (33%), Gaps = 45/742 (6%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMF 72 I+ F + A+ + F + + V L+ L I G R + G Sbjct: 61 IWATHFIAMLAFAP--GMAFGFALAPTVASFAVAV-MLVSLAALAIVGSRTRHGAVAGGA 117 Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF-WLGLV 131 L + + A T R + L+ + L Sbjct: 118 LIGLAIAGMHYTGMAAYRVQGTIA----WDGQRVAVSVLAGIALSVLALRLSLAPQRLAR 173 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + + + G+ F +S + A+ A ++ + ++ Sbjct: 174 ALAPLALLLAVCGAHFIGMGALSLRYDPRIALPD-----GSLDAAVVTILTANAAFLILG 228 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 + A L + + + +R L+ +A +L+ C + + + Sbjct: 229 AALAALRLSILNHRRRVAERQRLRDLADIAVEGLLI---CDDDAIVGVNRSIERILGRGR 285 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVR 310 +G+ L A + + E + I + + L+ VR Sbjct: 286 EEVIGRALPDLLPGLSAAAIPLTHERDATLRDASGAEIPVRVIAQTIAIETRPHLVVAVR 345 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALE------------QAPEQEAGKSFCCLRID 358 A D LT L N A + L +D Sbjct: 346 DQRDRLRAEAAITHLAHHDALTGLANRLRFNGVLAELLAERFAARRHDPAPFALLILDLD 405 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G M +R + + LL ++ + + +L G E ++L+G + Sbjct: 406 RFKAVNDTLGHGMGDDLLRRVAQRLLRVVGAADVVARLGGDEFAILLAGAGDAAGAGDLA 465 Query: 419 N---------ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + SR + LD+G + +T + LL + Sbjct: 466 AIQAAAERAIEILSRPFVIDGHILDIGASIGIALAPQDGDTPEQLLRSADLALYGAKEEG 525 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARL 526 E ++ + + L +R AL + + LY QP + G + ++ Sbjct: 526 RGR-FRMFEGTMNARMQARRSLELDLRRALARQEFELYFQPQVDARTGRFDGAEALIRWH 584 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + G+++P +F+PL + L VL + +VNL P+ Sbjct: 585 HPERGLVSPGEFIPLAEETGLIGPLGEWVLRTACAEARRWAT---PLPVAVNLSPVQFRD 641 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +A + + + + +EITE + ++ + +L G RI++DDFGTGY Sbjct: 642 PRLAATVRGILAETGLPGSRLEIEITEGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGY 701 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+R D IKID FV+ + IVR+I L ++ + AE VET QQ Sbjct: 702 SSLSYLRRFPFDKIKIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSV 761 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 + G LQGYL RP P Sbjct: 762 FIAGEGCDQLQGYLYSRPVPAE 783 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 662 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 94/440 (21%), Positives = 174/440 (39%), Gaps = 19/440 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 +L + R A DPLT LPN Q + Sbjct: 568 NILATAID---RKTTEERLTYLAQFDPLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFA 624 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + L ++ + + +L G E L+LS Sbjct: 625 DLDRFKIVNDTMGHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDAT 684 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + + + G+ LL Q+ Sbjct: 685 LIAEKVISALQVPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQGPA- 743 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYD 529 ++ + ++ + +R AL + + +L+ QP N E G++ +L Sbjct: 744 IYQFYLPQMNERAVARLKIETQLRGALARREFVLHYQPKASLINGEITGFEALLRWQHPA 803 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G++ P +F+ ++ L V++++ + + ++NL Q++ Sbjct: 804 HGLVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSARQFQQQD 863 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + +I P+ + E+TE AE + ++ L FG +I++DDFGTGY++ Sbjct: 864 LDSIIGETLRATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYSS 923 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR D++KID F++D+ T+ DA I ++ LA + L VVAE VET+ Q L Sbjct: 924 LAYLKRFPLDVLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEFL 983 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 + G +QGY +P PL Sbjct: 984 IRHGCDEMQGYYFSQPLPLE 1003 >UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Rhizobium RepID=B6A0H8_RHILW Length = 730 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 107/574 (18%), Positives = 198/574 (34%), Gaps = 26/574 (4%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 +R I A+ L + + W + LLC Sbjct: 139 AAATTLLAFSRDITERKQAEDAINSVRTQLLSVLQTMPDMIW-VKDMNGVYLLCNHTFER 197 Query: 238 FIAGYLVPVF----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA- 292 V +F + + L + Q L Sbjct: 198 LTGMAEAEVVGKTDLELFDIERARFFQQSDKAAIKAGECILSDEEWVVSQENGQTILLET 257 Query: 293 --FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 + V +L + R ++ H A DPLT LPN Q Sbjct: 258 RKVPVIDAAGEVVGVLGVARDVTELNVSRQKIHQMAFYDPLTSLPNRSLFNDRLRQMITS 317 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + ID+ + ++ G + + L +++++ + +L G E Sbjct: 318 AGSRGQRAGLMLIDIDHFKVVNDTMGHPVGDDLLCQAAARLNASVRDHDTVARLGGDEFA 377 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L L + N + + + + + + + L+ Sbjct: 378 ILLPDISQGDDLGRIANNILDKFRERFLLDGQEVFVSCSVGIALYPDDSADANDLVKYAD 437 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 + + + ++ +++ L + +R A+++G+L L+ QP + Sbjct: 438 SAMYLAKRSGRN-SFRFYSKDLTASAEERMRLESDLRRAIERGELELHYQPKVLLDSGAM 496 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RF 575 G + +L + G++ P +F+P+ L VL + A D + P + Sbjct: 497 VGCEALLRWRHPEMGMIPPVRFIPVAEDTGLIVELGRWVLHEACQTAAELNADSRSPHKV 556 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 ++NL + I ++ + V +EITE + ++ + +L GF Sbjct: 557 AINLSVKQFQSAGLVKSIAQIIDETGCRAEWVEIEITESLLLDQKDETLQALSELRSMGF 616 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 IAIDDFGTGY+ L R D +KID F+ T+ + +V++I +A+ SVV Sbjct: 617 SIAIDDFGTGYSALNYLARFPIDTLKIDRSFIN--STDRRNEELVKAILSIARCLGQSVV 674 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VET +Q A L G QG+L + P AD Sbjct: 675 AEGVETAEQAAFLVANGCGTAQGFLYSKAVPKAD 708 Score = 43.1 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 14/154 (9%), Positives = 32/154 (20%), Gaps = 5/154 (3%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCT 232 L ++L I A+ ++ + + G L + L + Sbjct: 8 VVTLSQSLLQPAPIFDIAEHKQAERELKKALEFAEGIIAAIPDVLFEVDEDGRYLQVWTR 67 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 E ++ + L + L A Sbjct: 68 NPELLAQQKEMLLGRTVNDVLAPDQAAIAMEALRDAGKEGVAYGRCIRISLPNGETRWFE 127 Query: 293 FIL----AVLISFSVCLLYMVRIYHRSEWLNRRW 322 + + + + LL R + Sbjct: 128 LSIAKRPSADPAAATTLLAFSRDITERKQAEDAI 161 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 122/585 (20%), Positives = 210/585 (35%), Gaps = 30/585 (5%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL----GKEKRAFTLSWLA 221 + LL++ L L R S ++ R + + RA + W + Sbjct: 117 LDRLLAVVVRALQEVETRERLDRAKHSLRLSEARLARAQKIARLGSWEWDVRAGEIYW-S 175 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + ++ + + L +V TL N + Sbjct: 176 DELYRIFGFTPGEPKRISKEWIYSLIHPADLPAFKQ------QLLTSVKTLQSFNMIYHT 229 Query: 282 LQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 E + V + V H D LT LPN Sbjct: 230 TSRSGGELVVNIQGEVERGEDGRAWLISGTVLDITARIKAESEIHHLINYDTLTGLPNRS 289 Query: 339 ALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L Q ++ CL +D + ++ G ++ + R L ++E+ Sbjct: 290 LLHDRLRQAIAQAAQDRHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVARRLAACVRES 349 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + L +L G E ++VL G +E + + + I ++ L + + Sbjct: 350 DTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTASIGIAAYPMD 409 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E LL ++ ++ + ++++L N++R AL++ + L Sbjct: 410 GEDGHTLLKHADLAMYKAKELDRN-NFHFFSHDMNIKVMERMMLENSMRKALERDEFFLV 468 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + +L D G++TPD+F+ L + VL + + Sbjct: 469 YQPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWVLMTACRQNR 528 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 R +VNL Q + I + + P+ + LEITE NA+ + Sbjct: 529 AWQKLGFPPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITESAIMRNADQN 588 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L + G +AIDDFGTGY++ LK +KID FV+DI TN DA I I Sbjct: 589 IAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTNPDDAAIAEII 648 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+ L+V+AE VET+ Q L +QGYL RP Sbjct: 649 IAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTD 693 >UniRef50_Q3IEE0 Putative orphan protein; putative conserved domain n=3 Tax=Alteromonadales RepID=Q3IEE0_PSEHT Length = 1002 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 112/660 (16%), Positives = 221/660 (33%), Gaps = 34/660 (5%) Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 R + + F L ++ I + ++ S + Sbjct: 331 GLDWYVGVYKKRSSTFSALADLKMKFFGLFILYAILVALLLHQALYQLVLRRIHSLVYAV 390 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 + + + L M + + I EK A LS Sbjct: 391 TNFGQGQLQIEFPKENKDEIGTLNGSFKDMTIEIRKLIDGLNQRIIEKEIAEKAARRLSK 450 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL-RYPFLNLTWAVSTLCLLNYN 278 A S + +F+ Y+ P + + R P L++ + + + + + Sbjct: 451 AVAFS---GTGVVITDKNFVIEYVNPKMLEMTSFSEEHFNRAPLLSIIASEMAILIDDID 507 Query: 279 QNFLQGV------------ETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWH 323 + + ++ ++ + + + + R+ Sbjct: 508 VDLRSRNCWRGDTLIESNNKAPIWVSLSISPIREDDGTITSYVASAQDISFVKESQRKME 567 Query: 324 LQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT L N + + +D + ++ G Sbjct: 568 QLAYFDTLTGLANRTFFRMQLRKSMALAERGHYAFALFYFDLDEFKRINDTLGHNAGDQL 627 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 + + L ++ + + +L G E ++LSG E + + N + + I + Sbjct: 628 LVEVANRLKQRLRAEDTIARLGGDEFAILLSGIEHQEHATQVANTIQKTLNEPIQLGSNE 687 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + + LL ++ A + ++ +++ + Sbjct: 688 VIISASIGITMAPYDSQEEDQLLKHADLAMYEAKAKGRN-TFHFYSQELNTAANERLFIE 746 Query: 493 NTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R A+ L +Y QP + GY+ +L G + P KF+P+ L Sbjct: 747 NELRQAIKDKQLTVYYQPQIDSRTQLVVGYEALLRWFHPTEGAIAPTKFIPIAEATGLIV 806 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + + ++NL ++ + ++ +S +++ L Sbjct: 807 ELGEWVLHQACNFAVKLERQGRANNIAINLSARQFKDASLLPTLKKIIASTQVSAKSLHL 866 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE N E+++ + +L G I+IDDFGTGY++ LKR DI+KID F+KD Sbjct: 867 ELTESMLMGNVEAAIAQLHELKGLGVSISIDDFGTGYSSLSYLKRFPVDILKIDRSFIKD 926 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I + D I +I +A+ L VVAE VET +Q L +QGY P D Sbjct: 927 IPDDNNDMAITAAIIAMAQKLKLDVVAEGVETVEQVEFLKNNNCFIVQGYYFSPPIAERD 986 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 100/580 (17%), Positives = 200/580 (34%), Gaps = 33/580 (5%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTP 233 L ++R I S + + A ++ ++ +++ ++ Sbjct: 323 SIALLDEMSRDI-SFSLDNFDREVQRKAAEQSLQLAASIYENSSEGMMITDADNLIMAIN 381 Query: 234 YENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 I GY + + + + + Y Sbjct: 382 PAFTRITGYAMEDVIGKNPGILKSGRHDMDFYQAMWNEILGTGKWIGEIWDRRKSGEVYP 441 Query: 291 LAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 + + + + + + + QA D LT LPN+R EQE Sbjct: 442 KWLTINTVFNDDGKVHHRIALFTDISQKKESEELIWRQANFDHLTGLPNWRMFHDRLEQE 501 Query: 348 A--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D+ + ++ G ++ L ++E++ + +L G Sbjct: 502 IKKSRRVELPLAVVFLDLDHFKEVNDTMGHATGDLLLKEAALRLSSCVRESDTVARLGGD 561 Query: 400 ELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L+L + ++ + + S N + + + ++ LL Sbjct: 562 EFALLLGELSDQDSIERVNECILNKFSAPFQLGNELAYISVSIGVTIYPSDATEIEALLR 621 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---N 513 + + + + ++ L N + AL Q L QPI Sbjct: 622 NADQAMYAAKNSGRNRS-CYYTQAMQSVAQNRMSLSNDLHKALAQDQFRLVYQPIVELET 680 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKG 572 + ++ + G+++P F+P+ Q L + V + K Sbjct: 681 GSIHKAEALIRWQHPNRGLVSPADFIPIAEQSGLIIQIGDWVFRQAANQVKHWRGAYGKD 740 Query: 573 PRFSVNLMPLTLLQK---NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + S+N P+ ++A K +S +EITE +++ + + Sbjct: 741 IQISINKSPVQFKSDSNTHLA--WFEHLKELDLSGGCFAIEITESLLMDASDTIVSKLMA 798 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 G ++A+DDFGTGY++ LK+ D IKID FV+++ ++ D + ++ +A Sbjct: 799 FGNIGMQVALDDFGTGYSSLSYLKKFDIDYIKIDQSFVRNLAPDSSDLALCEAMIMMAHK 858 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET +Q+ LL G Y QGYL RP D Sbjct: 859 LGIKVIAEGVETSEQRDLLRTAGCDYGQGYLFSRPLSTED 898 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 127/745 (17%), Positives = 238/745 (31%), Gaps = 40/745 (5%) Query: 17 AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPV-LCGMFCTN 75 + V + R ++ S+ + L +L+ + P + Sbjct: 344 PLSFPVAGEAIERALATGQPAASARMRLVQEHGEQHAVVLYQAVFASSPPAPVRAPLGVV 403 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + + S+ L + L Q W + Sbjct: 404 SAALGM---DDLLAAVSRQAAAQGIAVRLSDRDAGPESALLAGDDRGQESVWPEEILART 460 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + + L + + + ++ VL ML L + Sbjct: 461 ----TSIDFAGRRWELHTRALPRYIEQLRSWAAWGTIAVGVLTSAMLGALLLITTGNRRR 516 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN----------------DFI 239 Q L A R + + L + D Sbjct: 517 IQALVEHRTAELQAASVRLHENRAALIDAQRIARLGSWETLCARDGLHASDELHLLLDST 576 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 AG L + +I + L A + + + N + Sbjct: 577 AGDLNSLADLIDAIAPASRAALTDALERAATEPGRIMLDCNTDSLPMRTLQFRIEGEHVG 636 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKS 351 + + R A DPLT L N A L A + + Sbjct: 637 GRLRRIRGTAQDVTALREAEARIRYLARFDPLTGLLNRSAWQDHAQDVLRHAARHDDRCA 696 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ G + + L ++ + + ++ G E +++LS Sbjct: 697 VLFLDLDDFKTVNDSLGHAAGDRLLAQVACRLGGCVRAEDLVARIGGDEFVILLSRLAHA 756 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + +R + ++ L +G + + + LL ++ Sbjct: 757 EEPARVAERVLDALARPLQIDSQPLRVGASIGIALYPADGGEIDTLLKHADTAMYEAKES 816 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 A ++ + T+++ +R A++ GDL L+ QP + G + ++ Sbjct: 817 GRN-AYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEALVRW 875 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 + G++ PD+F+P Q L VL +VN+ L Sbjct: 876 QHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNISALQF 935 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 +++ + R+ P + LEITE + + +QL G +A+DDFGT Sbjct: 936 RRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQLVALGLTLALDDFGT 995 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL +KID FV + N DA I + LA+ + VVAE VET+ Q Sbjct: 996 GYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQ 1055 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L K G + +QGYL RP + + Sbjct: 1056 RGYLCKRGCRAMQGYLFSRPLGVEE 1080 Score = 60.8 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 73/282 (25%), Gaps = 21/282 (7%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCG 70 ++ L + + + + I Y + P + L+ LF+FG R V G Sbjct: 1 MRASPLPAVVLALAYWAVGYPALHLAIPPGYTAPFFPPAGIALAALFVFGLRLWPAVFAG 60 Query: 71 MFCTNLWNFHLSFLQTAVM-LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 L LG + + L R Sbjct: 61 SALVQLATAWPLLGSAGWNPLGPLAVPIGATLQAVVGVLLARRLLAPGDTLDTAGSV--M 118 Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF-TVVDLLSLFTAVLIYNMLFYYLTR 188 I + S + + L + +DA+F +L+ L Sbjct: 119 RFLGICMPLSGLVCSTIGVSALVWAAVIPASDALFNWWTWWTGDTLGMLVAAPLTLVFI- 177 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 P+ +R ++ +++++LL L + + F Sbjct: 178 ---------------GRPAQDWRQRRLGVALPMSIALVLLALAYRQVVSWEDSRVRAQFE 222 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTL-CLLNYNQNFLQGVETEY 289 L+ V ++ LL + + E+ Sbjct: 223 RDSVHLSALLQKRLEEQVDMVRSIERLLLASDQVSRADFHEF 264 >UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IYN4_9CHRO Length = 837 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 107/557 (19%), Positives = 208/557 (37%), Gaps = 34/557 (6%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLG-- 254 + ++ A L +++ +L + GY I T Sbjct: 271 KIETELKQSKESFQKAIINAPLPIMIHAEDGEILQINDIFTELTGYTHDEIPTIDTWLEK 330 Query: 255 ----VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLY 307 + P +N + + T + E + L F A L ++ Sbjct: 331 AYGKRQNIIRPVINHLYDLET-KIDEGEFVIDTSDEKQKILNFNSAPLEQLSDGRRVVIS 389 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRID 358 M + + AL D LT LPN Q + + +D Sbjct: 390 MAIDVTERKKAEEKLRHNALHDTLTKLPNRLLFIDRLNQSIERIKRHPTYSFAVLFIDLD 449 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G ++ + I L ++ + + ++ G E +++L+ E++ + H+ Sbjct: 450 RFKLINDSLGHIIGDRVLIQIATKLTSCVRSLDTVARIGGDEFIILLNDLESKIKAIHIA 509 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + I + + N E ++ ++ Sbjct: 510 ERILETLKLPIIIEQRNIVISASIGIAFNSQNNEEADDIIRNADLAMYKAKEQGKAR-YM 568 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGI 532 + ++ Q K++ L +R L++ + ++Y QPI +K+ G++ ++ G+ Sbjct: 569 IFDSVMYAQAQKRLELETNLRIGLEKQEFIVYYQPIISLVDKKLVGFEALVRWQHPQKGL 628 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNI 589 + P++F+P+ L VL + LAT + S+NL L Sbjct: 629 IPPNEFIPVSEDTKLIIPIGEWVLLESCRQLATWQQKYPECSMLKMSINLSIKQLKNNTF 688 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +I ++ + ++ ++ LEITE N + Q+ G ++IDDFGTGY++ Sbjct: 689 VSKIEKILDQTGLNGNSLKLEITESILMENILELRDILRQIKSLGIELSIDDFGTGYSSL 748 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L L D +KID FV ++ + + I+ +I LA LSV+AE +ET+Q L Sbjct: 749 SYLHNLPVDNLKIDRSFVIEMNQSEGNYRIIETIITLAHQLGLSVIAEGIETEQDLQTLR 808 Query: 710 KLGVQYLQGYLIGRPQP 726 L ++ QGYL +P P Sbjct: 809 DLQCEFGQGYLFSKPLP 825 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 104/561 (18%), Positives = 203/561 (36%), Gaps = 33/561 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 +R E R + + L T + V + Sbjct: 124 ITARKRAEETLQVSETRLALAQDAGSDGLWDCDLTTGEAWSSDRWWGVLGYEPGELASHA 183 Query: 257 KLRYPFLNLTWAVS-----------TLCLLNYNQNFLQGVETEYSLA----FILAVLISF 301 + L+ A + + + + + Sbjct: 184 RTWRALLHPEDAGAAERALVEHLSGRAPTYASEHRMRRKDGSWAWMMTRGKVVARAADGR 243 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFC 353 ++ + + + A D LT LPN + E + Sbjct: 244 ALRFIGTQIDITARKAAEGQVAHMARHDGLTDLPNRALFYERLEIRLADLHLNGGACAVL 303 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 CL +D + ++ G +R++ + +++ ++ + +L G E ++++ + R Sbjct: 304 CLDLDRFKTVNDSLGHAAGDFLLRAVAHRIRAVLRADDMVARLGGDEFAVLVADADDPAR 363 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + L + I + L +G + + + L + ++ Sbjct: 364 AETLAARLIAAVQAPIPFGKRRLKVGLSVGIAQAPSHGFDSETLFRRADLALHRAKTEGR 423 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 E + + L +R A++ +L+LY QP + G++ ++ Sbjct: 424 N-THRVFEPAMDEAEAARRDLERDLRQAIEGDELILYYQPQVSTGTGRLLGFEALVRWEH 482 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G++ P+ F+PL + L VL + + A + +VNL P Q Sbjct: 483 PTRGLVPPNAFIPLAEESGLILPLGEWVLRAACREAARWA---HPLKVAVNLSPRQFQQA 539 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ R++ + ++P + LEITE ++ ++ + +L FG IA+DDFGTGY+ Sbjct: 540 DLPERVLAILTETGLAPTRLELEITETLIINDMARALGILRRLKAFGVSIAMDDFGTGYS 599 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+ D IKID FV + + A+IVR++ L ++ +SVVAE VET Q Sbjct: 600 SLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDAQMRF 659 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L QGYLI +PQP+ Sbjct: 660 LAAEACDEAQGYLISKPQPIE 680 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 119/676 (17%), Positives = 228/676 (33%), Gaps = 48/676 (7%) Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTS-----RYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 + +V R R G T + Q W + I + G + Sbjct: 98 TLLDLVSPVMLDARHLGWVRIGMGRTQFNTQVERMLQSGLWYLASSIALIGLFASITGLY 157 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 F L + D + + T + R+ + ++ Sbjct: 158 FTRRLNAISKVAD--------AVQAGDTGRRVDIKGSDEAARLAQEFNAMLDTLQQREQE 209 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF---- 262 + + + ++ + + + V + +GK Sbjct: 210 LVQSRDALRIAATAFESNDVMFVCDADWRILQVNSAFQRVTGYLPEEAIGKAPRDLMGSG 269 Query: 263 -------LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIY 312 + ++ + + Y + + + + + Sbjct: 270 IQTQEFYEVMNESIRSNGSWQGEVWDRRKNGETYPAWTTITAVRSESGDVTHYVANLSDF 329 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMS 364 + D LT+LPN R L E + + +D+ + ++ Sbjct: 330 SARKAAENEIKTLVYFDSLTMLPNRRMLMGRLETAMHAALSTGHLGALLFVDLDDFKTLN 389 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVN 419 G ++ + L ++E + + +L G E +++L G E + + + Sbjct: 390 DTLGHHQGDILLQQVANRLQSCVREADTVARLGGDEFVVMLEGLSKDVAEASTQAEAVAG 449 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + ++ F QE+L L + Q+ A + Sbjct: 450 KVMQALNQPYDLGTLTRSSTPSVGITVFGKQQESLDEPLKRADLAMYQAKAAGRNTS-RL 508 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMT 534 + T + L +RTAL++ +LY QP + G + ++ G++ Sbjct: 509 FDPKTQAAVTLRADLEAALRTALEEEQFVLYLQPQISEDVRVTGAEALIRWQHPTRGLVM 568 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGR 592 P +F+ + + VL + K LA +VN+ Q + + Sbjct: 569 PGEFIAVAEDCGMIVPIGNWVLNTACKQLALWATQPAFAHMTIAVNVSAKQFHQHDFVEQ 628 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 ++ R+ + +EITE +N + + +E+L G A+DDFGTGY++ L Sbjct: 629 VLDALSRHGAQASGLKIEITESMLIANVDDVIVRMEELQHHGVGFAMDDFGTGYSSLTYL 688 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KRL D++KID FV+D++ +T DA I I LA + LSV+AE VET +Q L + G Sbjct: 689 KRLPLDVLKIDQSFVRDVLVDTNDAAIANMIVALANSMGLSVIAEGVETVEQMQYLARHG 748 Query: 713 VQYLQGYLIGRPQPLA 728 QGYL RP P+ Sbjct: 749 CHAYQGYLFSRPVPVE 764 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 102/564 (18%), Positives = 202/564 (35%), Gaps = 25/564 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 ++ Q +R E ++ +A ++ + + GY Sbjct: 343 LALLTDITSLQQTQQRLKLLQEATENSPASILITSAEGII---EYVNPAFELMTGYGADE 399 Query: 247 FF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---S 300 F + +L ++ + + ++ + Sbjct: 400 VIGKNPRFLKSGLMSPSFYQDLWETITAGETWRGELYNRRKTGELFWDRTSISPVKDLAG 459 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------F 352 + + + + QA D LT LPN Q S Sbjct: 460 QIIHFVAVKEDITEQKRNRELLDHQANYDSLTDLPNRSLALDRLRQATALSERSNDTVIV 519 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D + ++ G ++ I + L + + +L G E L++ + Sbjct: 520 MLLDLDRFKNINDTLGHSYGDCLLQEIAKRLRYHLPREITISRLGGDEFLIICPAVKENI 579 Query: 413 RLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 L+ + + S+ I L + + + T + L+ + + Sbjct: 580 HLEKLSQQLLKIISQPITIEAEELVITASIGVACYPNDGVTPEVLMRNADTAMYSAKRNG 639 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 ++ + ++ L +R AL+Q L ++ QPI + G + + Sbjct: 640 GND-FQLFMPTMNAEAHARIQLETHLRHALEQYQLKVFYQPIISLQDNHVVGLEALARWH 698 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLL 585 + G + PD+F+P+ + L +V+E + +A +VNL P L Sbjct: 699 DPELGNIPPDRFIPIAEETGLIIPLGYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLR 758 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 ++ +R++ P + LE+TE+ N + ++ LH+ G +A+DDFGTG Sbjct: 759 SNRFTQITAKILQRHNFRPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTG 818 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y+ L+R +K+D F++DI +T +V++I +A + VAE VET +Q Sbjct: 819 YSALSYLRRYPFQSLKVDQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQV 878 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L +G +Y QGY RP P + Sbjct: 879 EFLKAIGCEYGQGYWFSRPLPAVE 902 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 104/574 (18%), Positives = 204/574 (35%), Gaps = 30/574 (5%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS---WLAALSVLLLLLCTPY 234 + + R ++ + +I R + + ++ L + Sbjct: 117 VSTNVLIVRVRNLIQRNADRIQLRLAAHVFEYSGEAIMITDRDNQIVDVNAAFTTLTGYH 176 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 +++ ++ F R + + A+ T + + + Sbjct: 177 KSEVLSK------NPKFLSSGRTTRKEYQAMWAAIRTGGFWQGEFWDRRKDGSVFPKMMT 230 Query: 295 LAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 ++V++ + L + RR A D LT LPN L+ EQ Sbjct: 231 VSVVLDRAGDIDFYLANFVDVSHYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIA 290 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G + + + L +++ + + +L G E ++ Sbjct: 291 KRMSEQLAVVFLDLDRFKTINDTLGHPVGDDLLIQVADRLKTSVRQYDMVARLGGDEFVM 350 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L G + + + ++ L + GN E + L+ Sbjct: 351 ILRGHDMPSVASAVAEKIRLHLNQPFQIGQHTLRTATSIGIALYPGNGERMDDLMKHADT 410 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGE 517 + + ++ +++ L N + AL+ LY QP + + Sbjct: 411 AMYFTKSEGGN-GFCFFSSDMNLHAHEKLELENLLHGALENQQFELYYQPQLSLPEQQVI 469 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 G + +L + G ++P F+PL N VLE+ + + D R Sbjct: 470 GAEVLLRWHHPEKGFISPAVFIPLAEATNQIGAIGEWVLENACRQASQWLRDGLPLPRIG 529 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ KN+ + R+ + + LEITE ++ + + ++ L + G Sbjct: 530 VNVSGRQFQDKNLFTLVKRVLAETGLPADRLELEITETAVTASPDEAARLLQSLRECGIM 589 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD--AMIVRSITDLAKAKSLSV 694 +A+DDFG GY++ +L+ L D +KID FV+DI I + L SV Sbjct: 590 VALDDFGQGYSSLGQLRDLPIDRLKIDAAFVRDITDEPGHPGGAIAAATIGLGHNLGFSV 649 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AE VETQ Q + L G +QGY +P P Sbjct: 650 IAEGVETQAQLSFLMAHGCDEVQGYYFAKPMPRE 683 >UniRef50_Q1N453 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1N453_9GAMM Length = 800 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 103/573 (17%), Positives = 211/573 (36%), Gaps = 36/573 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVP 245 M+ + ++ + E++ L+ L+ + + L T N + + Sbjct: 218 MVDVFNSMLSKIEQERSDLTSSEEKFRQLASLSPVGIFQINLKHDITYVNNRWSDITGIR 277 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY-----NQNFLQGVETEYSLAFILAVLIS 300 + +R + N+ F + + +VL Sbjct: 278 QPNATLEHWLSHIRQEDRRAAVRAWRNLIENHQEFVVEVGFERNRDQITWAIIEASVLYD 337 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + + + A DPLT L N R + + + Sbjct: 338 GQGEIYGYMGAISDITDLKVAQLQMENLAFFDPLTGLSNRRLFKDRLHKSISESKRRGSF 397 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + R L ++E++ + ++ G E ++L+ E Sbjct: 398 VALLFLDLDQFKRINDSLGHDAGDVLLEETARRLENSVRESDTVSRIGGDEFTVLLNDVE 457 Query: 410 TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 ++H+ + R I N + + + + L+ Q+ Sbjct: 458 NTHGVRHIAEKILKKVCRPIMVKNQEIINTVSIGITLAPTDGDDVNTLMRNADMAMYQAK 517 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ-GDLLLYAQPIR---NKEGEGYDEI 522 A E ++ + + + +R ++D D ++Y QP + G + + Sbjct: 518 AMGRN-NYQFFSEEMNKEMMGYLEIEKDLRHSIDYPEDFIIYYQPKIELHSGRFVGAEAL 576 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA------THPCDKKGPRFS 576 + ++ PD+F+P+ + L V+ + P D + + Sbjct: 577 IRWKPEGKDMIPPDRFIPIAEESGLIVPIGAHVIRQACLQVKYMINTGIWPEDG---KVA 633 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +NL ++ ++ + ++ + EITE N E++++ + Q+ + G Sbjct: 634 INLSARQFSDPDLICKLQEILEQTKCPVHVLEFEITESTLMDNVENAIFTMRQIKEMGIS 693 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IAIDDFGTGY++ LKR D++K+D FV DI + D I ++ +A L VVA Sbjct: 694 IAIDDFGTGYSSLAYLKRFPIDVLKVDRSFVMDIPNDLNDMEITAAVIAMAHKLHLQVVA 753 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E +ETQ+Q L +Y QG++I RP P + Sbjct: 754 EGIETQEQIDFLKSNYCEYGQGFMIARPMPSDE 786 >UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488U0_COLP3 Length = 788 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 133/752 (17%), Positives = 262/752 (34%), Gaps = 69/752 (9%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNF 79 L V ++ L+ + + + + V++S+ +F G+VP L Sbjct: 47 LLVGMLGLAVMNTSWEMAPG----MFFDTRWVLISLCGLF--FGLVPTLIAGAMMVSLRL 100 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL-VTPIGIKC 138 H+ V C + + + +L W L + I+ Sbjct: 101 HIGGAGILVGSLCVIIPGSIGCL-----------FAIILKRKNLKLDWFKLYSFGMLIQI 149 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 ++ L+ + + + ML + R ++ Sbjct: 150 TVLGCMLLMPEHLRYKVIGA---------VIQPVIVVFPVCTMLVGLILRRQRDRRKSEY 200 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFFIIFT 252 ++ L + L C F+ + + Sbjct: 201 DLTESQKLLNREQSLMRGLIGSLPDLISFKDVQGRYLGCNHAFEQFVGLTEQELKGKMDQ 260 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLN---YNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 G + + + ++ + ++ I F L+ Sbjct: 261 ELKGNFKPSDIAGLDEQEIIASGKVYSQDEWVVYPDGSKVLHETIKKTFDGFDGTRYGLM 320 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + R + + A D LT LPN R L+ E + + +D Sbjct: 321 SVSRDITERKNHEDQIQRLAFYDSLTQLPNRRMLQDRLQLLVTTSARDERFNALFFIDLD 380 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR----- 413 + + ++ G M + ++ + +++ + + +L G E + ++S + Sbjct: 381 HFKTLNDTQGHNMGDQLLIAVAARIQDSVRDEDIVARLGGDEFVALISNLGEDEATAGHV 440 Query: 414 LQHMVNIL---NSRQIHW---------NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + + + + N F N + +L Q Sbjct: 441 AEKVAEKIRLSICQPYKLSIKENVDANNEMIFHCTPSIGISLFKSNLTSPDEILKQADVA 500 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGY 519 Q+ A A+ + + + +L + A+D G+L L+ Q ++ +G Sbjct: 501 MYQAKAAGRN-AIRFFDPAMQIALEENAAMLAELHQAIDNGELELFYQIQIDETKGIQGA 559 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSV 577 + +L G+++P F+P+ + L VLES L +++ + SV Sbjct: 560 EVLLRWFHPIRGMVSPLDFIPMAEESGLIIPIGRWVLESACHQLKVWENIPNRENWQISV 619 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L Q+N + + +I+P + LE+TE N + + + QL++ G Sbjct: 620 NVSALQFQQENFVEIVQEIILSNNINPHGLKLELTESMVLDNVDIIIEKMHQLNQLGIDF 679 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ LKRL +KID FV+DI T+ DA IV++I +L+ + V+AE Sbjct: 680 SMDDFGTGYSSLSCLKRLPLKQLKIDQSFVRDITTDPDDAAIVQTIINLSNSLKYDVIAE 739 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VETQ+Q+ L G QGYL RP P+A+ Sbjct: 740 GVETQEQRQFLFNNGCSQYQGYLFSRPVPIAE 771 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 106/561 (18%), Positives = 197/561 (35%), Gaps = 27/561 (4%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF- 248 A + A+ +++L +L + I GY F Sbjct: 81 QAYRQLLATKRQVEAGLALQRLIVDHASEAMMLTDSAQRILSVNSAFEQITGYAGKDVFG 140 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSV 303 + N+ V+ + T Y + + Sbjct: 141 KTPTMLSAGHQGLASHRNVWDFVAENGSWEGEIWDRRKDGTIYPKQMRITAICEDGVQLS 200 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 + + S R A DPLT LPN AL+ + + + Sbjct: 201 HFVAVFSDISESRAQAERLEYLARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLII 260 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +DN + ++ G + + R L M ++L++L G E ++V+ E + Sbjct: 261 DLDNFKTINDSLGHHAGDRLLSELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEEAVI 320 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 +V L + + L + + Q L+ + A+ Sbjct: 321 ELVQQLAGGIGDPCNIDGHVLHCTSSIGISLYPEDGRDAQALIRNADTAMYYAKANGRN- 379 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 E ++ K++ L + + AL + L+LY QP + + G + ++ Sbjct: 380 NHKFFTEPMNAAANKRLHLESELWCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRHPL 439 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G++ P +F+P+ + L VL + + +VN+ Q Sbjct: 440 RGLIPPAEFIPVAEECGLILPLGHWVLLTACRQAREWLDAGIDMGEMAVNISAHQFRQPE 499 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + LEITE ++++ + QL G ++AIDDFGTGY++ Sbjct: 500 FISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGYSS 559 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+R D +KID F+ D+ T+ A +V SI L ++ L +VAE VE Q L Sbjct: 560 LAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAEFL 619 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 L + +QG+ +P + Sbjct: 620 RTLECERVQGFHFYQPVCAEE 640 >UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 Tax=Clostridia RepID=Q3AAV9_CARHZ Length = 769 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 99/570 (17%), Positives = 199/570 (34%), Gaps = 35/570 (6%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-------------CTPYEND 237 I +R E+R + A+ + L ++ + Sbjct: 184 EEVRQNLIEIQRQQDELKKSEERYRLVVEGASDGLWDWDLETDTAYISERWRDLIGFDKE 243 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 I Y I V + N + L + Sbjct: 244 VINNYCETWIKFIHPRDVKAVINNLRNHLEKKTPFYL--CEYRIKTKDGKYIWILSRGKA 301 Query: 298 L---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 L ++ + + + + + A DPLT LP + Sbjct: 302 LWNKEGKAIRMAGSHTDITQRKQMESKLEYMAFHDPLTNLPRRDVFLERLKVAMADARRN 361 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + +DN + ++ G ++ I + L ++E + + ++ G E +++L Sbjct: 362 GKKLAVFFVDLDNFKIINDSLGHHTGDRLLKKIAKELTKCVRETDTISRVGGDEFIILLP 421 Query: 407 GPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + I NN L + + + ++ + +L Sbjct: 422 DVNSIEDTDKVAKRILELFDQPIKLNNYELPVTISIGIAIYPDHGKSERAILKNADIAMY 481 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + + + + + +R AL++ +LY QP+ + + + Sbjct: 482 TAKRKGKN-GFQYFDIAMKSEVEFANTVKRDLRLALEKNQFILYYQPLIDLKTGKIASME 540 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNL 579 +L G+++P F+P+ + VL + + + G SVN+ Sbjct: 541 ALLRWQHPKKGMISPFHFIPIAEETRQIISIGEWVLRTACRQMKEWLGMGYSGFSVSVNV 600 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L Q N A + + K + P+ + LEITE E+ + N+ L K G +I I Sbjct: 601 SVHQLEQPNFAKVVCDILKEIELEPRYLELEITETVLIEAVETVVENLYHLKKAGVKIII 660 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGT +++ +++ D +KID FV I + ++ I+ +I L L V AE V Sbjct: 661 DDFGTENSSFRYMQKFTVDGLKIDRSFVNGIKID-VNKAIIDAIILLGHRLKLPVTAEGV 719 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET++Q L + G +QG+ +P P + Sbjct: 720 ETREQLECLIESGCDKVQGFYFSKPLPPDE 749 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 95/594 (15%), Positives = 205/594 (34%), Gaps = 43/594 (7%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 +V +++ + + + + + I + R+ + Sbjct: 469 ISVSLVITAMRSPAHGIVGYLGIAQDITERKRQENTLRKLSQVVEQSPTA---VILTDPQ 525 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 + + I GY + + +L ++ + + Sbjct: 526 GNI---EYANPKFTQITGYSLTEVHGKNPRLLKSGETSAEEYRDLWTTITAGREWHGEFH 582 Query: 281 FLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + + + ++ + L + + + A D LT L N Sbjct: 583 NKRKDGSLFWEHASISPVRNDAGDISHFLAIKEDITDRKRYEEQLQHLATHDNLTGLANR 642 Query: 338 RALEQAPEQEAGKSFCCLRID---------------NLEFMSRHYGLMMRVHCIRSICRT 382 L+ EQ + + ++ G ++ Sbjct: 643 ALLQDRLEQSILFA-------KRSGRLVAALLLDLDRFKIINDSLGHSFGDRLLQIAADR 695 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGA 439 L ++ + + +L G E +++L+ E + + + R + + + Sbjct: 696 LRESVRGADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITAPFQIADREITVTASL 755 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + E + L+ Q+ A ++ + + + +R AL Sbjct: 756 GISIYPQDGEDEETLIRNADIAMYQAKEEG--NAFRLYAPEMNIVVHEAMEMETDLRRAL 813 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 D+G+LLL+ QP + + G + ++ G++ P F+PL + L VL Sbjct: 814 DRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWVL 873 Query: 557 ESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 E++ + + + NL + I R+ + + P + LE+TE Sbjct: 874 ENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLLELELTESM 933 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N +++ +++L+ G +A+DDFGTGY++ L+R D +KID F+ D+ + Sbjct: 934 IMRNVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDPS 993 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A + SI +A + L VAE VET++Q L + QGYL P + + Sbjct: 994 AAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEE 1047 Score = 74.3 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 76/297 (25%), Gaps = 30/297 (10%) Query: 45 AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTA---VMLGSQTFVVLCAC 101 + L ++ IL + W+ + ++ L L F A ML + F + Sbjct: 41 VGISLGLLSIILMLSPWQYIPGIVFDTRSVLLGISGLFFGAVATSVAMLMAAAFRLFQGG 100 Query: 102 AILRWQLGTRWRYGLTSRYVWQR-------LFWLGLVTPIGIKCSMYLVGSFFDFPLKIS 154 A +G + G+ Y R L W L G ++L+ F L Sbjct: 101 AAAWIGVGVIFASGIVGIYWKYRNRKSAEQLTWWQL---YGFGVLVHLIMLAFMLLLPWQ 157 Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 T F I V L+ ++ +++ R +S R +A K+ Sbjct: 158 TAFRVLHHISLPVLLIYPLATAMLGSLMLKRQRRDQISKALQTSEERLRMALKASKQGLY 217 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST--- 271 + E I GY F + ++ + AV Sbjct: 218 DLNVQSGN-------MIVNAEYALILGYDPQNFRETNGDWIARMHPEDRSAVLAVYRNYL 270 Query: 272 ---LCLLNYNQNFLQGVETEYSLA----FILAVLISFSVCLLYMVRIYHRSEWLNRR 321 + + + +L + Sbjct: 271 AGKTEEFRAEFRQRTRCGQWKWVLSMGKIVERDTHGQPLRMLGTFSDITERRQSEEQ 327 >UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMK7_THIDA Length = 738 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 102/578 (17%), Positives = 206/578 (35%), Gaps = 43/578 (7%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL--------------LLLLCTPYENDF 238 + + EK L + + + L D Sbjct: 146 RRRLERENNHILQRLQQSEKWHRFLVNSSPDFIYTLDCDGRFTFVNDRVESLLGYTREDL 205 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL-CLLNYNQNFLQG---VETEYSLAFI 294 + + + + + + L N + ++ Sbjct: 206 LGQHYSTIIHEEDLARAEHVFNERRAGDRSARNIEIRLKCNPGMRRPRLMNGRCKAVELT 265 Query: 295 LAVLISFSVCL--------LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + L + + + H QA D LT LPN Sbjct: 266 ATGMYDEDATLFERRFIGSYGVAKDVTERKQAEETVHYQAYHDLLTGLPNRALFRDHLAL 325 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + L +D+ + ++ G + + ++ L ++E + L +L G Sbjct: 326 MLAQAKRSHKTLAVLSLDLDHFKVINDSLGHTIGDELLLAVGARLRQCLREGDTLARLGG 385 Query: 399 SELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++L + G ++ + + SR ++ + + + E + L+ Sbjct: 386 DEFAVLLPTLLSRGDVEQICRKIIQVLSRPVYVKGHEIYISVSIGACVAPDDGEMIDSLI 445 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q Q+ A L E + ++++ + +R AL + + +L+ QP + Sbjct: 446 RQAEIAMYQAKAQGRSR-LQFWEAGMQAPYSERMQIEADLRRALARNEFVLFYQPQVDTV 504 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 E G++ +L G ++P +F+P+ + + VL +A Sbjct: 505 SGEVRGFEALLRWWHPQRGFLSPAEFIPVAEESGVIVPIGDWVLREASAQMAEWRRAGLP 564 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R SVN+ L + ++R + + + Q + LEITE + E++ + +L Sbjct: 565 QVRLSVNISARQLESPDFVESVMRAVQVHALDGQQIELEITESLLMRDFEANAIKLGRLS 624 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G R+AIDDFGTGY++++ L R +KID F++++ + IV ++ + + + Sbjct: 625 ASGIRLAIDDFGTGYSSFKYLSRFPIHTLKIDQSFIQELER-EENLSIVNAMVAMGRGMN 683 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+VVAE VETQ Q A L ++ +QG+ P D Sbjct: 684 LNVVAEGVETQSQLACLQQMQCHEMQGHYYSVPMSGHD 721 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 116/588 (19%), Positives = 220/588 (37%), Gaps = 21/588 (3%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 A + + LF + ++ + + HF QIL + +R + Sbjct: 157 RAQAQLQAALWEKQVLFDSAMVGIVFLQERRMTRCNRHFEQILGYGPGELAGSSSRRWYL 216 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 + + F ++ + + + S +++ Sbjct: 217 SDEDWHEAGVRCYAPLVQGQAFEGQMVLRTRDGRAIECEVRSKAVDPSNVAQGSIWIVMD 276 Query: 277 YNQNFLQGV---ETEYSLAFILAVLISFSVCLLY-MVRIYHRSEWLNRRWHLQALTDPLT 332 ++ L + + + R + R + A D LT Sbjct: 277 VSERLRIQRQLAGMHGELEQQVRDRTRELQETVGNLHREIQDRQRDQERIYWMAHYDALT 336 Query: 333 LLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN L + E A + L +DN + ++ G + + I + L Sbjct: 337 ELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVNDSLGHRIGDALLVEIAQRLR 396 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAW 441 +++ + + +L G E +L+L G +G + + + +H + L + Sbjct: 397 TTVRQRDTVARLGGDEFVLLLPGANAQG-AARVAAKMQEAALQPVHIQHHELSLALSMGI 455 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + + L+ ++ A + + Q+ + + L N +R AL++ Sbjct: 456 ALFPEHGSDFETLIQSADTAMYRAKADGRN-SFRFFTPTMQAQSARALQLTNALRRALER 514 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 L L+ QP + G + +L + G ++P +F+P+ VL + Sbjct: 515 NQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTGQILPIGEWVLRT 574 Query: 559 LLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 L L T +VNL + Q + + RL Y + P + LE+TE A Sbjct: 575 ALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLAEYGVQPHLLELELTENVAV 634 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 ++ +++ ++QLH G R+++DDFGTGY++ LKR Q +KID FV+D+ + D Sbjct: 635 ADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFVRDLDHDGNDR 694 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 IV +I +A+A + AE VET Q L + G QG+ RP Sbjct: 695 AIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPL 742 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 105/570 (18%), Positives = 204/570 (35%), Gaps = 32/570 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL--AALSVLLLLLCTPYENDFIA 240 F L+R I + +E T + ++ + + I Sbjct: 314 FIVLSRDITERKRHERELHIAATAFDSQEGMLITDAEHRILRVNNAFTRVTGYEAEEAIG 373 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL-- 298 F + + ++S + Y + + Sbjct: 374 NT------PAFLQSGKHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTITAVQT 427 Query: 299 -ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAGK 350 + + + H A D LT LPN R+L++ Sbjct: 428 SAGEITNYVGAFTDITQRKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQL 487 Query: 351 -SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +DN + ++ G + + L ++ + + +L G E +++L Sbjct: 488 GAVFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLG 547 Query: 410 TEG-----RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + +++ +V + + F + ++ + Sbjct: 548 VDESNVLAQVKDIVAKVILTIQAPLTIGTQAYHPTCSIGIALFSEKDFS-DEVMKRSDMA 606 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKEGEGYD 520 Q+ + + + + +R AL L L+ QP + G + Sbjct: 607 MYQAKSSGKN-TYRFFDPVAEEALCSLARMDADLRFALSNQQLELHYQPQYRCQTLIGAE 665 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVN 578 +L D G+++P +F+PL L V+ K L + +VN Sbjct: 666 ALLRWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVN 725 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + Q N + +L Y +S + + LE+TE + E ++ ++ L +G R A Sbjct: 726 VSARQFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFA 785 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LKRL D IKID F++D+ + D+ IV++I + + L+V+AE Sbjct: 786 LDDFGTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEG 845 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET +Q A L +L +QG+L+GRP + Sbjct: 846 VETDEQLAFLTELDCLDIQGFLLGRPSSID 875 Score = 64.2 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/334 (10%), Positives = 76/334 (22%), Gaps = 19/334 (5%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFL-----AWMPLCVMLSILFIFGWRGVVPVLC- 69 L V L+ + + + L + + L + + V+ Sbjct: 7 LPLVNNVALLLAMGVLFDAFAFNEAKPSLPKRITSGLILGCIAIAIMSMPLSITSGVIID 66 Query: 70 --GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFW 127 + + F + F ++ L Y +Q Sbjct: 67 TRSILLSVSGLFFGVIPTVIAASMAAVFRIMEGGQGTIAGLLIIMTSAGIGIYCYQWKQR 126 Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 LG G + + + + + + L + + +L L Sbjct: 127 LGHEVIKGYQLYLMGLTVHVSMMVCLLVLPYSTLGLLLSEITLPIIVIFPLATVLLGGLL 186 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-------ENDFIA 240 +S A+ R S R + + + Y +D +A Sbjct: 187 SQQISRKKAEAALRESERTSNHARHRLEATFSAIPDLLFEMDIEGRYLACHASDPDDLVA 246 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA---V 297 + +F + + Q LQ ++ Sbjct: 247 KPEELIGKSVFDFIPLDEAQIIVEAIREADLKGISKGRQVTLQVGRGLREFELSVSRKHD 306 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQAL-TDP 330 S + + R + R H+ A D Sbjct: 307 DESSEHHFIVLSRDITERKRHERELHIAATAFDS 340 >UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607V4_METCA Length = 819 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 111/588 (18%), Positives = 199/588 (33%), Gaps = 27/588 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + F + +TR + A+ R E T + Sbjct: 231 RWLESHAVPFASRPGAPDAVLAVTRDVTERKLAEEAVRLAATAFETSEAIMITDAAGIVQ 290 Query: 224 -SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 T Y +D I G G R L Sbjct: 291 RVNSGYSAITGYTSDEIVGTPSEFLHPGGEEGKTSPRAILEALKGTDC----WKGELTAR 346 Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + + + + + + A DPLT LPN R Sbjct: 347 RKNGDVCPVWLSIKAVRNDEQILTHYVVTFVDISERKRAQQEIEQLAYFDPLTGLPNRRL 406 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + Q + S + +D + ++ G + +R + L + Sbjct: 407 FLERLNQAIGESCVNGSRCSLLFVDLDRFKHLNDARGHTVGDQLLRKVAERLSEGVGRGG 466 Query: 392 KLYQLPGSELLLVLSGPETE--------GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGR 443 + +L G E +++L+G + E + + ++ R ++ + Sbjct: 467 MVARLGGDEFVILLNGLDEEFESACRRTMDVAENLRVILQRPFVLSSGQHYVTASIGTAI 526 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + ++ LL ++ A + + + ++ L + AL++ + Sbjct: 527 YPFDTDSADDLLKAADMAMYEAKASGRN-TVRAYASTMQAAAETRLTLERDMHAALERRE 585 Query: 504 LLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LY Q + G + +L GI+ PDKF+ L + L V E + Sbjct: 586 FRLYLQSQVDGNGRIVGAEALLRWEHPTEGILLPDKFIALAEETGLILPIGEWVFEQVCH 645 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 SVN+ P Q + + R+ KR +P +I EITE S+ + Sbjct: 646 ENVRLSQAGHRLSLSVNISPRRFQQADFLDHVQRILKRTGANPHDLIFEITEGLLVSDFD 705 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 ++ + L + G R ++DDFGTGY++ LKRL +KI FV D+ + D +V+ Sbjct: 706 DAIAKMSFLERLGIRFSVDDFGTGYSSLAYLKRLPLSELKIAQTFVNDLPDDPSDVALVQ 765 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I +A +L VAE VET+ Q L G QGY P P + Sbjct: 766 TILSMAYHLNLETVAEGVETRAQLEFLKARGCTRFQGYYFSPPLPATE 813 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 97/447 (21%), Positives = 179/447 (40%), Gaps = 16/447 (3%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 L + + +RI + + QA DPLT LPN L Sbjct: 182 LANNLAHGILSLRIMAEHKRYEEQLAYQATHDPLTALPNRNLLADRISQALAWAQRHRRW 241 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D +F++ G ++ + L +++ + L G + ++VL+ Sbjct: 242 IAVLFVDLDFFKFVNDSLGHGKGDQLLKMVAERLSERVRQVDTLAHQGGDKFVVVLTDLR 301 Query: 410 TEGRLQH---MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 ++ S + L + + + E Q L+ ++ Sbjct: 302 GNEEADRAVHVIREAISLPFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVAMYRAK 361 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 ++ + ++ + +R AL+ + L+ QP + G + ++ Sbjct: 362 EQGRN-CFRYYTRELNERVASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLI 420 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPL 582 + G++ P F+PL + L + V+ + +VNL P Sbjct: 421 RWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPR 480 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + + G I + + + P+ + LEI E + ES+ + +L G ++++DDF Sbjct: 481 QFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDF 540 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR +KID FV+DI+T+ A I +SI +A +LSVVAE VET+ Sbjct: 541 GTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETE 600 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L G +QGY + RP P A+ Sbjct: 601 GQLEFLRAHGCNEIQGYYLSRPLPAAE 627 >UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y83_COLP3 Length = 1071 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 100/562 (17%), Positives = 209/562 (37%), Gaps = 26/562 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-CTPYENDFIAGYLVPVF 247 M+++ + + S ++ + I+G+ + Sbjct: 491 MVIAFNQMLAERIKSEGEQRISAAVFKYASEAIMITNAENRIETVNPAFCHISGFSIEEV 550 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS-- 302 + + + ++ + Y ++V+ Sbjct: 551 LGKSPNILNSGKHDNHFYQKMWQSLEQDNSWQGEIWNKRKNGEIYPEFLAISVVRDQDKK 610 Query: 303 -VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFC 353 + + + + + LQA D LT LPN + + + Sbjct: 611 PLQYISLFSDITKHKKYEEDIWLQANYDSLTGLPNRGLCVERLHNKLKGDKAEDSEVALL 670 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D +F++ +G ++ L ++E + + + G E +++L G Sbjct: 671 FIDLDRFKFVNDTWGHSSGDELLKLAAIRLRNCIREKDTVARFGGDEFVVLLVGLSNRFA 730 Query: 414 LQHMVNILN---SRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 ++ +V + S H NN + + + ++ LL Q+ A Sbjct: 731 IERVVKNILTSLSMPFHLRNNNEAVVSASIGVTIGPVDGDNVELLLKNADTAMYQAKAAG 790 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + ++ ++++ + +R A+ + + +L+ QP+ + E G + ++ Sbjct: 791 RN-TFQFFTKSMNETVSRRMHIEQALRQAIKRQEFVLHYQPVVSLDTGEIIGAEALIRWQ 849 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 D G++ PD F+ + + L V+E L + +VN+ Q Sbjct: 850 HPDKGLIYPDSFIEIAEEAGLIEPIGQWVIEQACTDLRYWHDLGLKIQVAVNVSSRQCKQ 909 Query: 587 KN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + I I + K +ISP ++ +EITE N+E M ++ + G I +DDFG Sbjct: 910 TSQTPIKDIIKKALKVNNISPSSLKVEITESSLMDNSEEMMTTLQDIRSLGVAIYMDDFG 969 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK D++KID F+ + + DA +V ++ + + SL +V E +ET+Q Sbjct: 970 TGYSSLSYLKHFPIDVMKIDRSFIAGSIDDKTDASLVEAVVLIGHSLSLKLVGEGIETKQ 1029 Query: 704 QQALLHKLGVQYLQGYLIGRPQ 725 L LG Y QGY I +P Sbjct: 1030 HYDYLRSLGCDYGQGYFISKPI 1051 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 96/559 (17%), Positives = 204/559 (36%), Gaps = 26/559 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 M++ R A + ++R L+ A ++L+ + +F Sbjct: 290 MVLVIVEDLTEEERLRALAEASDRRFRELAETAYSGIVLVDSAM--RIVYFNSAAEKMFG 347 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-----LQGVETEYSLAFILAVLISFSV 303 T + + L + L + + T++ + +V S Sbjct: 348 CNRTHVLERPLDILLPEAGTLFPDPLKDGESRIWDSVGQRFDHTQFPMEISSSVFSEPSG 407 Query: 304 CLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + ++R + + A D LT LPN L + + Sbjct: 408 SFVTLVLRDLTERKTFENQLLYLANYDALTGLPNRIHLIERLKQAIPLAERNGQHLALLF 467 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + + + L +++ + + + G E + +L G E Sbjct: 468 LDLDRFKGVNDSLGHASGDLLLVEVSKRLSNCVRKGDTVARFGGDEFVFLLEGLEEREDA 527 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + +N + M + + E+ LL + ++ Sbjct: 528 KPIAEKILGALNAPFEIDNVQVFMNGSIGISTWPHDGESSDLLLRRADAAMYRAKELG-- 585 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKY 528 + + ++ + +R AL++ + L+ QP + G + ++ Sbjct: 586 NSYAFYNPEIGALPERRFSMERELRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHP 645 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQK 587 + G++ PD+F+P+ L V+ S L + R +VN+ + Sbjct: 646 EKGLILPDQFIPVAESTGLIVPMGAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFERG 705 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + + + + +E+TE + + + +L + G I+IDDFGTGY+ Sbjct: 706 GLIQTLESSMRESGVDSRLLEIEVTESVLMQHP-MASDTLRELSRMGILISIDDFGTGYS 764 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+L +KID FV + + I +I + A L +AE VE+++Q + Sbjct: 765 SLSYLKKLPVYKLKIDRSFVTTLPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDI 824 Query: 708 LHKLGVQYLQGYLIGRPQP 726 L +LG +QGY RP P Sbjct: 825 LRRLGCDEIQGYYYSRPLP 843 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 102/562 (18%), Positives = 194/562 (34%), Gaps = 27/562 (4%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPV-- 246 AQ SL + + V++ L I GY Sbjct: 485 ALAQFTREAQWQESLARTRLHAAALESTQDGVMVTDLRPRIVSVNRAFTEITGYSETEAV 544 Query: 247 -FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FS 302 F L + T + Y+ ++ + Sbjct: 545 GMSPRLLQSGRHEPAFFTRLWNQLLTHGRWQGEVQNRRKNGELYTQWMSVSTVRDEHDQP 604 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCC 354 + + + +R A DPLT LPN + E + Sbjct: 605 THYVSVFTDITPQKEAEQRLQHLAHFDPLTQLPNRLMVLSRLEHAIASAARAERRVAVLF 664 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +DN + ++ G +R++ L + + L +L G E +L+L Sbjct: 665 IDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRREDTLGRLGGDEFILMLEHLREPQDA 724 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + L + + + + + L+ Q+ Sbjct: 725 AQVAQELIGLLETPFRVAGQEVYVQASIGISLYPDDGLEVGELVRDADAAMYQAKRAGRG 784 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 E ++ ++ L +R AL+ + +L+ QP+ ++ G + ++ + Sbjct: 785 -VYRFYTESLTTAAQSRLALDTRLRRALENKEFVLWYQPLYRLADRCLIGLEALVRLNQP 843 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + P +F+PL+ + V + + + R ++NL P + + Sbjct: 844 GLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQGRAWLDEGLDFGRIAINLSPQEIRRG 903 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 R+ +R + + + LE+TE E + + +L G R+AIDDFGTGY+ Sbjct: 904 QTDERVREALERSGLPAERLELELTESGLMEQGERAEAFLHRLRALGVRLAIDDFGTGYS 963 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR +KID FV+D+ + DA +V+++ + + +SV+AE VET+ Q Sbjct: 964 SLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNLGISVLAEGVETEAQFDY 1023 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L LG QGY P+P + Sbjct: 1024 LRSLGCDAAQGYFFSPPRPADE 1045 Score = 42.3 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 14/184 (7%), Positives = 41/184 (22%), Gaps = 2/184 (1%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 L + ++ + L +L + L L R+ + + Sbjct: 153 LDLAAMALERQLRLHSQVRIDHQRWLTLFTLGLLSALAITLMGVLMRLSRQRNESDAALA 212 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 A + +S+L L + I + + Sbjct: 213 ASEAHLRTFMRAMPDVSFLF-DRDGRYLDVFGPAEKLAEPVERMLGRRIADVHGERHVEL 271 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 F+++ + L+ + + + ++++ R Sbjct: 272 FMSVIRLALETREPQRCEFALEVQQGTRWFEARVCAVPDR-EQVVWVSWDISERRAAELR 330 Query: 322 WHLQ 325 Sbjct: 331 VTEL 334 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 104/476 (21%), Positives = 195/476 (40%), Gaps = 33/476 (6%) Query: 286 ETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLN--------------RRWHLQALT 328 L A + V R + + QA Sbjct: 109 GELLYLEVYKAPFYDEDGKTIGTVGAGRDITNLKKTQLDLEKNLKILDEQREQLEYQANH 168 Query: 329 DPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN +Q + + + +D+ + ++ G + + + Sbjct: 169 DSLTDLPNRVLFMDRLQQSINIAQRYDNKVALLFIDLDHFKEINDSLGHGVGDKVLIEVS 228 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILNSRQIHWNNTGLDMGY 437 R + M++++ L +L G E ++L+ + ++ + N L +G Sbjct: 229 RRMKNQMRKSDTLSRLGGDEFCIILNDIIDIEDMSDIITSGMEALKEPMEINGHTLYVGM 288 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + + LL ++ +E ++ + ++V L +R Sbjct: 289 SIGVSVYPNDGNSASSLLKNADAAMYKAKGDGRN-TYCFYDEAMTERAFERVFLETALRK 347 Query: 498 ALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ +L++Y QP + G + ++ G + PDKF+PL + + D Sbjct: 348 ALEEDELVVYFQPQIDARENKLVGMEALVRWEHPIMGFIYPDKFIPLAEITGMIVQLDRL 407 Query: 555 VLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 V++ L P + ++NL + + + I + S + + E+TE Sbjct: 408 VMKKALTQFKKWDKAGLNPGKLALNLAIKQIEENDFIEFIENILDCEDCSYKNIEFELTE 467 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 Q +N E+S+ +++L G IAIDDFGTGY++ LKRL D +KID F+KD+ + Sbjct: 468 NQIMNNPEASIETLQKLSDLGISIAIDDFGTGYSSLAYLKRLPIDKLKIDRSFIKDLPQD 527 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA I ++I L + +L V+AE VET++Q+ + + G Q++QGY RP + D Sbjct: 528 ADDAAITKTIISLCSSLNLKVIAEGVETEKQKNFILQNGCQFIQGYYYSRPLSIED 583 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 103/517 (19%), Positives = 198/517 (38%), Gaps = 22/517 (4%) Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVET 287 + I+GY + P + L A+ST + Sbjct: 604 YVNSAFEKISGYAASEVIGQSASMLKSGLTPKSLYKQLWDAISTGHAWQGELQNRKKNGD 663 Query: 288 EYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA----- 339 + +A + + L + + + + + QA D LT LPN Sbjct: 664 IFWEHAHIAPIFDNAGVTKHYLALKQDVTQYKQQEEKILHQAHYDSLTGLPNRLLSLDRL 723 Query: 340 ---LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 L+ A + + L +D+ + ++ G + + L ++E++ + +L Sbjct: 724 SQMLKDAHRAKNNVAVLFLDLDDFKKVNDTMGHSVGDELLIQAAVRLKNTIRESDVVGRL 783 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++LS ++ + + L + N L + + E + Sbjct: 784 GGDEFIIILSNINEPIEVEIIASKLLEQFYQPFRLENRELVSTISIGIALYPLDSEDPKE 843 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL Q S + ++ +++ + +R+AL Q + +Y QP + Sbjct: 844 LLRQADSAMYHSKDRGRN-TYNFYTHQMNHDMDRRLKIEEQLRSALKQKEFEVYFQPFVD 902 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 ++ G + +L G +TPD+F+P+ Q L V+E Sbjct: 903 IKSRKIIGAEALLRWNNALLGQVTPDEFIPIAEQTGLIVSIGQYVIEVAFATAKKWQQTY 962 Query: 571 KG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + ++N+ P + + ++ I + LEITE S+ N+ Sbjct: 963 NPYFKIAINVSPKQFRENTFVDMLNIQLDKHQIHASTIELEITEGVLLSSDAVIDSNLIS 1022 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 ++ G I++DDFGTGY++ L+ + +K+D F+ DI + D +V + + Sbjct: 1023 INDIGVSISMDDFGTGYSSLSYLRSYPFNTLKVDKSFINDITVDPGDLELVGAAIAMGHG 1082 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +L+VVAE VET++Q LL+ L Y QGYL +P P Sbjct: 1083 LNLTVVAEGVETEEQYHLLNALKCDYGQGYLFSKPLP 1119 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 9/140 (6%), Positives = 32/140 (22%), Gaps = 7/140 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLV 244 IV + E + A +++ + + GY + Sbjct: 312 IVGVSRDMADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTL 371 Query: 245 PVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F I + + + ++Y + + + ++ Sbjct: 372 DELFNKPIGDIETSENHQFSTQNIITAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDGDD 431 Query: 303 VCLLYMVRIYHRSEWLNRRW 322 ++ + ++ Sbjct: 432 GMFFCFIKDISQRINAEQKL 451 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/322 (8%), Positives = 68/322 (21%), Gaps = 18/322 (5%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIF-GWRGVVPVLCGMFCTNLW 77 L + L+ + I I Y + M++I + W + L Sbjct: 12 VLLLALVVIYDAIKLQKIAPKKYGNVLSGIFIGMIAICVMNNPWELRPGIFFDTRWVLLS 71 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 L F ++ + ++S +W+ Sbjct: 72 LSGLFFGFIPTLIATILAACFRLYQGGAGLYVGTLIIFISSAIGLGWRYWMKSANKQPNW 131 Query: 138 ----CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 ++V L + D I T+ L ML L + Sbjct: 132 QNLLAMGFVVEIGVLLCLLLMPVADKYDIILTISPTLFTVYTC--GTMLIGLLLKQHQQR 189 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPVF 247 ++ ++ + + L C ++ + + Sbjct: 190 QQISQELHHHKNLLETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNPEDIK 249 Query: 248 FIIF--TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 + + + + + + S Sbjct: 250 HKTDYDLFDRQQADSFIKADRFVLQENQPWMDEEWITTPDGIAHIFKTHKTPFVDSSGDI 309 Query: 304 -CLLYMVRIYHRSEWLNRRWHL 324 ++ + R + + + Sbjct: 310 QGIVGVSRDMADRKLIEEQLRR 331 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 114/594 (19%), Positives = 211/594 (35%), Gaps = 34/594 (5%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++ + + ++R + A+ R ++ T + Sbjct: 414 SVRHMASAGRVLGDRQGEAARVVVVSRDVTERKQAEQWERIAATAFESQQGMFITDANAV 473 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 +L I GY + + ++ + Sbjct: 474 -------ILRVNQAFTDITGYAADECIGQTPKLLSSGRHDASFYAAMRESIERNGVWQGE 526 Query: 279 QNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + ++ + + + + A D LT LP Sbjct: 527 IWNRRKNGDVFPEWLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLP 586 Query: 336 NFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R L E + + +DN + ++ G M ++ + + L + Sbjct: 587 NRRLLHDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSV 646 Query: 388 QENEKLYQLPGSELLLVLSGP-ETEGRLQHMVN-------ILNSRQIHWNNTGLDMGYGA 439 +E + + +L G E +++L E L +R + Sbjct: 647 REGDTVARLGGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSV 706 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F G Q + L+ + ++ A AL + + T + + +R A+ Sbjct: 707 GITLFGGQQVGIDELMKRADLAMYEAKASGRN-ALRFFDPRMQAVVTARADIEKDLRAAV 765 Query: 500 DQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + L QP + + G + +L G ++P +F+P+ + L L VLE Sbjct: 766 GRQSFFLAYQPQVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLE 825 Query: 558 SLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + A ++ SVN+ Q N +++ + R P+ + LE+TE Sbjct: 826 TACAQAALWAARPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESM 885 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N + + + L G ++DDFGTGY++ LK+L D +KID FV+D++T+ Sbjct: 886 LLDNVQDIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPN 945 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D +I R+I LA+ LSV+AE VE+ +QQ L G QGYL RP LAD Sbjct: 946 DEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALAD 999 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 12/137 (8%), Positives = 34/137 (24%), Gaps = 16/137 (11%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL----------CTPYENDFIAGYLVPV 246 ++ A +++ +S + +L L + D Sbjct: 317 ITARKQLEASLREQKEFFRLISESIGEHIAVLDLQGQRLYNSPSYGQFFGDTRDLRGSDS 376 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--- 303 F + +++ F T ++ + +A VL Sbjct: 377 FADVHPEDRERVKRVFRQTTETGR---GQEIEYRLVRNDGSVRHMASAGRVLGDRQGEAA 433 Query: 304 CLLYMVRIYHRSEWLNR 320 ++ + R + + Sbjct: 434 RVVVVSRDVTERKQAEQ 450 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 658 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 134/739 (18%), Positives = 244/739 (33%), Gaps = 49/739 (6%) Query: 33 PLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVP-VLCGMFCTNLWNFHLSFLQTAVMLG 91 ++ + L++ W V + L L AV Sbjct: 109 LHGMLLHFDAAHPPLLAGSADISLWLSSWARVAEVITLWFTAMRLSAPGLGRTWLAVACA 168 Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 +V + L W + + Q L + I + D P Sbjct: 169 ITLAIVGLSLGPL-----PGWFAQVAGSALHQPLALALALALIVAATVLQRSARRNDQPR 223 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ----------ILWR 201 + + + + +L + + L + L + + + + Sbjct: 224 ERILAWATMAFACGEITVGALGVHGSVASPLAHGLRVIAYALLYQAVFDAGIRRPFARIQ 283 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVP------VFFII 250 + E R + V L + L + G F + Sbjct: 284 EAESRLRESESRLARVVSAMPDMVFLKDADGVYLSVNPVFERFIGRPEHQIVGRNDFDLT 343 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVLISFSVCLLYMV 309 + R L G ++ + L +L + Sbjct: 344 TPAQARQFRQNDQRAMQTRQPLVYEETLTFAEDGYQGRFETIKTPIRDLHGRVTGVLGVC 403 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLE 361 R + + A D LT LPN R ++ + + +DN + Sbjct: 404 RDITERKRAAQEIERLAFYDALTGLPNRRLLLDRLQRSIATCQRTHKLGALLFIDLDNFK 463 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQH 416 ++ G M + + L+ ++ + + + G E +++L + + Sbjct: 464 DLNDTLGHDMGDQLLAQVATRLVASVRAADTVARFGGDEFVVMLEALAPDLRTATAQAEM 523 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + L + + + F + ++ LL + Q+ A Sbjct: 524 VADKLLASLNQPFALDGGQHYSTLSIGVTLFGEQRLSVDELLKRADLALYQAKAAGRNTQ 583 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGG 531 + + + L +R L + +LL+Y QP+ + G + ++ G Sbjct: 584 -RFFDPDMQAAVNARSNLEADLRQGLARAELLVYYQPVVDHQARLMGAEALVRWRHPQRG 642 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNI 589 ++ P F+PL Q L VL++ L G SVN+ Q Sbjct: 643 MIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQFRQPGF 702 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +++ K + P+ + LE+TE + E ++ + QL G A+DDFGTGY++ Sbjct: 703 VAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSL 762 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL D IKID FV++++ + DA IVR+I LAK+ L VVAE VET Q + L Sbjct: 763 SYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQ 822 Query: 710 KLGVQYLQGYLIGRPQPLA 728 G + QGYL GRP P+ Sbjct: 823 LHGCEGFQGYLFGRPVPME 841 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 658 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 107/559 (19%), Positives = 198/559 (35%), Gaps = 28/559 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIFTL 253 R+ A + +A ++L I GY P Sbjct: 486 ITQRRQTEAELRIAAIAFESEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPRLLS 545 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVR 310 + + ++ + + ++ + + + Sbjct: 546 SGRHDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFT 605 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + + A D LT LPN R L + + +D+ + Sbjct: 606 DLSTRKSAEDQIKSLAFYDTLTGLPNRRLLLDRLKQALASGARHRRQGALLYIDLDDFKT 665 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS-----GPETEGRLQHM 417 ++ YG + ++ + + L ++ + + + G +++L E ++ Sbjct: 666 LNNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARPGGDSFVVLLEALSTNSVEAATEAENT 725 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLA 473 + S+ + FD QE + L + Q+ Sbjct: 726 GEKIRLALSQPYQIADHAHRSTASIGVTLFDDRQQEGIDEPLKRAELAMYQAKTAGRN-T 784 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGG 531 L + + L +R A+ LLY Q + + G + ++ G Sbjct: 785 LRFFDPQMQTAVMAMAALEADLREAVRSNQFLLYYQAQVSGERQVAGVEALVRWQHPVRG 844 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNI 589 ++ P +F+PL Q L VLE+ LA ++ +VN+ L Q + Sbjct: 845 LVPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWASQPERAHLTVAVNVSALQFHQADF 904 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +++ KR +PQ + LE+TE +AE + + L + G ++DDFGTGY++ Sbjct: 905 VAQVLAALKRAGANPQRLKLELTESLLVHDAEDVIAKMITLKEQGVGFSLDDFGTGYSSL 964 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL + +KID FV+DI+ + DA I + + LA LSV+AE VET+ Q+ L Sbjct: 965 SYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVALADTLGLSVIAEGVETEAQRDFLA 1024 Query: 710 KLGVQYLQGYLIGRPQPLA 728 G QG+L R P+ Sbjct: 1025 AQGCHAYQGHLYSRALPID 1043 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 19/229 (8%), Positives = 53/229 (23%), Gaps = 10/229 (4%) Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF 157 + + + L L G+ + Sbjct: 276 AAGWVLAAVLPTAEAFAPVRAMQQRMLLATSLLTLLAGLVVWWTIKRQLAPLLATARRLA 335 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 AD + L T + R++ + + L ++ + S Sbjct: 336 AMADEKQALRALP--VTHPDEIGQVVKGFNRLLGTLGQREALLQQILDTSSVAIFLVDRQ 393 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 + + + L ++ V + K L+ S L ++ Sbjct: 394 GRITKANQRMATLFGYPLHELQGMEYVALVHPAQRETGRKNMLALLD-----SALQSVDL 448 Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 + + + +TE+ + + L+ ++ + Sbjct: 449 ERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQRRQTEAELR 497 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 658 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 111/581 (19%), Positives = 213/581 (36%), Gaps = 24/581 (4%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + LL L R + ++ L+R ++ ++ Sbjct: 110 LARLLPAIERELREAEERRRRRRAELELRNSEKLFRSIFQNAVTGMATCSPDGRFLKVNP 169 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 L + EN+ ++ + +L +Y + +++ Sbjct: 170 ALCEMLGYSENELFGVSVLDITHPTDIELTERL-----FAEAMGGQTRSHDYEKRYIRRD 224 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + + ++ ++ A D LT LPN + + Sbjct: 225 GETLWAHVSTSWHYNEDGTPSYSVALISNITPHHQAKQKIRQLAYFDGLTGLPNRQLFLE 284 Query: 343 --------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 A + C + ID + ++ YG ++++ + L M + L Sbjct: 285 HCNSSLTQARRNRSPLGVCIIDIDRFKGVNDTYGYESGDALLKTVSQRLSDCMSREDVLA 344 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L E V++ ++ + + + I L G F + Sbjct: 345 RLGSDEFAAVIASVGSQDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDA 404 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL + Q+ H + ++ +++ + +R ALD L L+ QP Sbjct: 405 EALLKNAATAMHQAKQHGSN-NFRFFSKGMNRMAWERIEIETGLRRALDLQQLALHYQPQ 463 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L + G ++P +F+PL + L VLES + Sbjct: 464 VDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHR 523 Query: 569 DKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R +VN+ Q R+ + +R I+P+ + +E+TE ++ ++ + Sbjct: 524 AGFPSLRMAVNISARQFKQAGFIDRLDAIIQRSGINPELLEMELTESLIMEKSDETLMTL 583 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + G ++AIDDFGTGY+ LK D IK+D FV+DI NT DA I +I +A Sbjct: 584 VDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMA 643 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + V+AE +ET++Q A L + QGY GRP P+ Sbjct: 644 HSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVPVE 684 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 658 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 103/569 (18%), Positives = 202/569 (35%), Gaps = 23/569 (4%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + L + H + + + ++ + I G Sbjct: 338 VGRALAQAQELLHQREADRAQAEEKLALAATALDSAVEGVVIARGGRIATVNRAFTSITG 397 Query: 242 Y--LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 Y + + L + + A+ + + Y ++ Sbjct: 398 YRSAEVIGQPLAILLAEAEKTHRNDRRRAMCETGQWQGEVHGRRKNGEMYPAWSSISRAA 457 Query: 300 SFSVC--LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 S L+ + ++ R A D LT LPN + Sbjct: 458 YGSDEMILVCVFSDISAAKQYEARLQHLAHYDALTELPNRLLFRERLADMLVRAERHGNM 517 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D + ++ G +R + L ++ ++ +L G E ++L Sbjct: 518 LALLFIDLDGFKPINDTLGHAAGDELLRRVAERLGGCVRASDTTARLGGDEFAVLLDELR 577 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGL--DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + R + G + + + LL Q + Sbjct: 578 SPEEAGIIARNILDTLERPYILAGQPQCQYISASIGIGCYPSDSLDAETLLRQADMAMYR 637 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + ++ Q ++++ + N++R ALD+ +L L QP + E G + Sbjct: 638 AKQEGKNR-YRFFAPEINAQASERLFMANSLRAALDRDELRLVFQPCMDFATLEVAGVEA 696 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ G + P +F+ L + L VL + + R +VNL Sbjct: 697 LVRWEHPQKGTILPSRFISLAEESGLIEPIGEWVLREAARRVREWKNAGIFAGRVAVNLS 756 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P + ++A R++ + ++P+ + LE+TE + E ++ + +L G I+ID Sbjct: 757 PRQFRRSDLASRLLVVLDEAGLAPRDLELEVTEGMIMEHPERAVVVLTELVAAGVSISID 816 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR +KID FV + + D + R++ +AK+ LSVVAE VE Sbjct: 817 DFGTGYSSLAYLKRFPVHSLKIDRSFVSGLPGDRNDRSLTRAVVAVAKSLGLSVVAEGVE 876 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ-PLA 728 Q L ++G + QG+ RP P A Sbjct: 877 HAGQVDFLRRIGCDFAQGHYFSRPLDPAA 905 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 658 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 99/430 (23%), Positives = 178/430 (41%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSR 365 E +R A D +T LPN +L Q + + + +D + ++ Sbjct: 424 EQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIFIDLDRFKNIND 483 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---N 422 G + + + L ++ + + +L G E ++VL + H V + Sbjct: 484 SLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISAAHAVRKIQQTL 543 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S+ + L++ + + ET+Q L+ + + + + ++ Sbjct: 544 SQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRN-SYQFFTQEMN 602 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 +++L + +RTAL++ +++L+ QP + E G + +L G + PD F+ Sbjct: 603 LTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFI 662 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ L L+S + LA R +VNL Q N+ + + Sbjct: 663 PVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILA 722 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++ + LEITE A + +++ ++ L + G +AIDDFGTGY++ LK + Sbjct: 723 ATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVN 782 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+ I T++ DA I + LA VVAE VET+ Q L LQG Sbjct: 783 RLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQG 842 Query: 719 YLIGRPQPLA 728 Y P A Sbjct: 843 YFFSEPLSAA 852 >UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZI3_COLP3 Length = 858 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 101/583 (17%), Positives = 210/583 (36%), Gaps = 27/583 (4%) Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-- 228 ++ + + N++ + H + S A + + +++ Sbjct: 255 AIIGTLSMDNIMSDIELAYVEELHQIVQQRDIALRESKKHLLVAEKIIEASLDGIMITDE 314 Query: 229 ---LLCTPYENDFIAGYLVPVFFIIF--TLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFL 282 ++ + GY + L G+ F W + + Sbjct: 315 QGTIISVNPAFTRVTGYKEAEVLGLNSKILSSGRHTSDFYQQLWLCILEQGVWQGEIWNK 374 Query: 283 QGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + + + +R A D LT LPN R Sbjct: 375 RKNSEIYPQWLTIIEISEGVDNNKVFAAIFSDISERKLAEKRIENLAFYDELTQLPNRRL 434 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + +D + ++ +YG + +RS + L +E + Sbjct: 435 FFDRVDMALAIAHRKNNKMALFFIDLDYFKEVNDNYGHRIGDLLLRSFAKRLTESSKEGD 494 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ G E L+L+ + N + + H L++ + + Sbjct: 495 TVARIGGDEFTLLLTDMREVDHICKACNRIVEKLRQPYHIEGHALNITTSIGIAVYPEDG 554 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ ++ + ++ + ++ L+ + +R AL +L L Sbjct: 555 TNEEELMKNADIAMYRAKDIGRN-SFQLFTPAMNAHSQERSLIQSHLRLALVHNELELNY 613 Query: 509 QPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + G + +L G ++P +F+P+ + A D VLE K Sbjct: 614 QAQIHGVTGKVMGVEALLRWYNPILGQVSPAQFIPMAEELGFIAEIDHWVLEHACKQRKL 673 Query: 566 HPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R +VN+ L Q N+ + + + + + + +EITE + + Sbjct: 674 WLDQGLDCGRIAVNISALHFHQGNLVASVESVLAQSQLPAELLEVEITEGCFIKQMDKAT 733 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++QL K G ++A+DDFGTG+++ L L D +KID F+ + N ++ I +I Sbjct: 734 SILKQLKKMGVKVALDDFGTGFSSLSYLTSLPIDTLKIDASFIAKLPHNFRESQITSAII 793 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 LA+ +L +VAE VET+ Q+ L + G + +QGY +P Sbjct: 794 TLAQNLNLDIVAEGVETEAQKIFLIERGCEIMQGYFYNKPVCA 836 >UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74EC6_GEOSL Length = 799 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 103/578 (17%), Positives = 205/578 (35%), Gaps = 39/578 (6%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL--------SVLLLLLCTPYENDF 238 + + R + E + L +L Sbjct: 204 LSTLPEHLTYLVRSSRVLQELHESEAQNRALLNAIPDMMLHVCREGTILDFRAGNGCAYA 263 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 G + I L G + A++T ++ ++ Sbjct: 264 AFGGNLRGRTIADLLPPGAAAQFMAQVGHALATGTMMVCEYELEGPGGLNTHE---ARIV 320 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGK 350 + + +L +VR A D LT LPN +A Sbjct: 321 ANGTGTVLAIVRDVTERRQSEEMIRYLAHHDSLTGLPNRIFFGEMLELVLSRARRDGKQV 380 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY------------QLPG 398 + + +D+ + ++ G H +R + L ++ ++ + + G Sbjct: 381 AILFVDLDDFKLINDTLGHAAGDHLLREAAQRLKGCVRSSDYVASGAESGLCGNIARFGG 440 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +L L ++ + + + S + + + + + + E L+ Sbjct: 441 DEFILSLGNLDSVDDVVAVTQRIISEFSREFRIDGHEIFVSVSIGISMYPDDAEDTGSLV 500 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 + + ++ +++ + ++R AL++G++ ++ QP + Sbjct: 501 RNADMAMFAAKEEG-GPSFRFFTRGMNEAAQQRLSIELSLRKALERGEIFVHYQPKVDLS 559 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK- 571 E G++ + + G++ PD F+PL + L R VL + T + Sbjct: 560 CGEITGFEALARWHHPELGLIPPDTFIPLAEKNGLIVRIGEWVLRAACAQARTWIDEGFS 619 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 ++NL N+ + + + P + EITE E +M + +L Sbjct: 620 DLCMAINLSSHQFTSGNLTSMVKEVLDETELPPSCLEFEITEGILMERTEKTMRILSELR 679 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G RI+IDDFGTGY++ LKR + +KID FV++I + DA I+++I +A+ + Sbjct: 680 DMGVRISIDDFGTGYSSLGYLKRFPVNTVKIDRSFVREIDSPHEDAAIIKAIIAVARNLN 739 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VE+ +Q L G QG+L G+P + Sbjct: 740 LQVVAEGVESHRQTEFLLAHGCNEAQGFLFGKPVHPDE 777 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 114/579 (19%), Positives = 218/579 (37%), Gaps = 38/579 (6%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC----- 231 + + R I H Q + T+ A VL+ + Sbjct: 658 ITGVDCMLTIARDITERHLMQEKLQLAA-----------TVFENTAEGVLITDIDQRISA 706 Query: 232 TPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 I GY +L + ++ + Sbjct: 707 VNRAFSEITGYSEIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGEL 766 Query: 289 YSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 Y ++ + + + + + + QA DPLT LPN E + Sbjct: 767 YPSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQ 826 Query: 346 --------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + L +D + ++ G + ++ I + L +++ + + +L Sbjct: 827 GVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLG 886 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +++L G + N L + + + + L Sbjct: 887 GDEFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTL 946 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 + +S A +++ ++ Q ++++ L + +R A+++ ++ L QP + Sbjct: 947 IRNADAAMYRSKAKGRNR-VEAYTRDLTAQASERIALEHELRRAVERNEMSLCFQPKLSL 1005 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + G + ++ G + P+ F+ L + + VLE + + + Sbjct: 1006 KTQSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQAWKQHYQ 1065 Query: 572 GP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 S+NL L ++A RI +L K + + + LEITE S AE ++ + QL Sbjct: 1066 PFGPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQL 1125 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 K G ++AIDDFGTGY++ LKRL DI+KID F++ + + DA I R+I L ++ Sbjct: 1126 KKLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSM 1185 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+++AE VE Q QQ L G + +QGY++ P P + Sbjct: 1186 QLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEE 1224 Score = 42.3 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 25/294 (8%), Positives = 64/294 (21%), Gaps = 15/294 (5%) Query: 42 IFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCAC 101 + + +P ++L + R + + L + ++ + Sbjct: 267 LLVYGLPTVLLLMAVLAVVIRINRRLSSEISRRIALEQELRSSEYHYRGLVESLSAIAWE 326 Query: 102 A-------ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIS 154 A S ++ + L + Y Sbjct: 327 ADANDFTYSYVSPHAEDLLGYPLSDWLRPGFWRSILHPEDALWAQAYCDSETAAGRDHSL 386 Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 + + + + + L I + R ++ Sbjct: 387 DYRVIRADGQPLWVRNIVSMIEHGHQPVMRGLMIDISETKRTEDALRLSEQKFASVFQQC 446 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI----IFTLGVGKLRYPFLNLTWAVS 270 + +A S LL + I V + GV L Sbjct: 447 PDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLWGVEGSGPLLLERLHQG- 505 Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWH 323 + N +F + ++ + L+ VR + + ++ Sbjct: 506 --GIRNLEMSFRRSNGQLFTGLTSAETFELDGTPALVVAVRDISQLKETQQQLQ 557 >UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDV9_DESAH Length = 708 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 102/584 (17%), Positives = 208/584 (35%), Gaps = 37/584 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 ML Y M+ + + L+ + + +K A +W L + C+P Sbjct: 118 VMLGYRAKYMLRAGQAFRELY-LNENRLIKTQKLAKLGNWQIDLVNNVFS-CSPEACSLQ 175 Query: 240 AGYLVP-------VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + F I ++ N A L N + + Sbjct: 176 GLNPMDKPVTFDGFFEPIIANQQDMVKQTISNAVKAKENFSLNYQVMNLNGTQKHILNQG 235 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + +L +V+ + + R A D LT L N Sbjct: 236 EVFVDDNGVPEIMLGVVQDLSQLKQAEERIRFLAFYDGLTGLANRMLFMDRLDTQIKKAT 295 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK------------ 392 + L +D + ++ G + ++++ TL +++ + Sbjct: 296 RYNQKFALFFLDLDQFKKINDTLGHHIGDLLLKTVAETLKSCIRKTDTAARRDKDESGSM 355 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++LS ++ + + + + F + Sbjct: 356 IARLGGDEFTVLLSDIKSPENSAIIAQRILDAIPEAYSIEGKEVSVTTSIGISVFPADGS 415 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 T + LL + E ++ ++ + ++ + + +L+LY Q Sbjct: 416 TPETLLKNADSAMYHAKDRGKN-NYQFYMESLNRAAIERFSMERDLKKSFARDELVLYYQ 474 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P +++ G + ++ + G++ PDKF+PL + L + VL++ + Sbjct: 475 PQIRFADRKIVGAEALIRWIHPHKGMIPPDKFIPLAEETGLVIDINKWVLKTASRQNDEW 534 Query: 567 PCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R ++NL L +NI I K + + LEITE + + +M Sbjct: 535 TRAGLNSIRVAMNLSGYKLATQNIIQDIKEALKTVKFDSKKLELEITENILMQDDDETMQ 594 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +Q+ + IA+DDFGTGY++ L + IKID F+ + +I+++I Sbjct: 595 IFQQIREMNISIALDDFGTGYSSLSYLTSFPVNTIKIDRSFIMGSALQVDNRVIIKAIIA 654 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + +++AE +ET++Q LL + G QGY + P P + Sbjct: 655 MGHSLGKTIIAEGIETKEQFDLLKRYGCDEAQGYYLSPPIPADE 698 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 110/601 (18%), Positives = 219/601 (36%), Gaps = 26/601 (4%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 I+ + ++ + + L L + L + + A Sbjct: 255 IAPWRLASETLMALCFSLLLGYLAYLLVQLQRRKLSLQTAVSEQTRELVNARAQLQATLD 314 Query: 213 RA-FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST 271 L + + + + T + + ++ + Sbjct: 315 AIPDLLFEVGSDGI-IYQFHTRRPELLLVPPEAFIGKAFSEFMPDEVNQVIWSAMEEADA 373 Query: 272 --LCLLNYNQNFLQGVETEYSLAFILAVLIS-FSVCLLYMVRIYHRSEWLNRRWHLQALT 328 Y + G ++ L+ + + R + R + A Sbjct: 374 TGFSEGKYYALEMPGGRRDFELSVASKAGKEKGIQRYVMLSRDITERKENEARINNLAFF 433 Query: 329 DPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN R L+ Q A + + +D+ + ++ + G + + ++ Sbjct: 434 DPLTQLPNRRLLQDRLEHAIATGQRQAALGALLYIDLDDFKTLNDNRGHHVGDLLLIAVA 493 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV-----NILNS---RQIHWNNTG 432 L ++ + + +L G E L++L G + + + + Sbjct: 494 DRLRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQAAQQVQQIAEKILQSLNQVYVLDEQE 553 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 F + ++ LL + + A L + + ++ L Sbjct: 554 YFNSPSIGICLFGDDDADIEDLLKRADQAMYHAKAAGRN-TLRFFDPHMQASAAQRFALQ 612 Query: 493 NTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 N IR AL LY QP + G + ++ L + G+++P F+P+ + L Sbjct: 613 NEIREALLFNQFKLYYQPQVDRTGRITGAEALIRWLHPERGMISPMDFIPIAEESGLILP 672 Query: 551 FDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 +L++ + L + S+N+ Q + +++ R +P + Sbjct: 673 LGNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQQPDFVTQVLAAVTRTGANPHQLT 732 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LE+TE +N + + ++ L G + ++DDFGTGY++ LKRL + +KID FV Sbjct: 733 LELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLPINELKIDKSFVN 792 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DI+T+ DA I R + LA++ L+V+AE VETQ+Q+ L + G + QGY G+P Sbjct: 793 DILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQGYYFGKPVGAE 852 Query: 729 D 729 + Sbjct: 853 E 853 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 109/580 (18%), Positives = 213/580 (36%), Gaps = 41/580 (7%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE-----NDFIAGYLV 244 +V + + + L + + ++ T + ++ A LV Sbjct: 116 VVKRALQERHILHEKQQVEEQLHLERDLLHNVIDGLEMQVMITDRDFNIQVLNWQAQKLV 175 Query: 245 PVFFIIFTLGVGKLRYPFLN----------LTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 PV + +L F + + A++ QN+ S+ Sbjct: 176 PVGQSATEMTCYQLTRGFDSPCSEHGMECPIETALAKNRATKVQQNYQDENGENVSVEKT 235 Query: 295 LAVLISF---SVCLLYMVRIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQAP 344 +L + + R + + D LT LP Sbjct: 236 ATLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHYDTLTGLPQRDFFFDLL 295 Query: 345 E--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + L +D + ++ G + ++ + + L ++ + L ++ Sbjct: 296 HSHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVAQRLQNNIRITDNLSRM 355 Query: 397 PGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E L+ L + + + + S + + + F G+ + + Sbjct: 356 SGDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEK 415 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL ++ A + ++ + + L +R A++Q L L+ QP + Sbjct: 416 LLSCADSAMYRAKESGRD-AFRFYKPHMNEKAQGLLWLETELRLAIEQEQLELHYQPQYD 474 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + ++ + G++ P +F+P + +L VL + + +A Sbjct: 475 LNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMG 534 Query: 571 K-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 R +VN+ + + ++A + +L Y + + LEITE + E++ + + Sbjct: 535 ISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNK 594 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G +++IDDFGTGY++ LKR +KID F+ D+ N DA I SI LA Sbjct: 595 LTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAGH 654 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET +Q + L + QY QGYL RP P D Sbjct: 655 MGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKD 694 >UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0A6 Length = 1517 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 100/542 (18%), Positives = 191/542 (35%), Gaps = 20/542 (3%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + + + V + + G + Sbjct: 956 EAEEQLNLFKRSIENISEGVFITNTQFKFISVNNAYCGYTGETRDQALASYMHFHLYPDA 1015 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEW 317 + + + ++ Y + + + + + + Sbjct: 1016 FTEEIKKTLKAKGNWSGEVESVRVNGERYEMELNIDAVHDDDGKISHFVGVFSDITSRKS 1075 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQA----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 + A TDPLT LPN + + + A + CL +DN + ++ G Sbjct: 1076 TEKELLKLANTDPLTELPNRSFFQASHQNLVRKGAQHTLLCLDMDNFKKINDSLGHQTGD 1135 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNN 430 I+ I + L + ++ Y+L G E +++ + H L SR N Sbjct: 1136 ILIKQIAKRLQRITGKSATCYRLGGDEFSVLMEDNADIHTVTHYAQNLLDTLSRPFIINK 1195 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 +G F + + Q +L + + + ++ +Q+ Sbjct: 1196 QEFVLGASIGIAFFPDDGTSPQEMLKNADTAMYFAKNNGGN-SYQFFSGEMNQNAVRQLQ 1254 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + N IR + +Y QP + + + ++ GI++P +F+PL Q Sbjct: 1255 IENLIRQGIKDDLFTVYYQPKVDIASGKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQ 1314 Query: 548 SARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 QVL R +VN+ ++ RI ++ +SP Sbjct: 1315 IIEIGEQVLRKACADTKRWVNQGLFSGRVAVNISAKQFELPDLDDRINKILSDIGLSPLH 1374 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + EITE + E+ + + +L + G +A+DDFGTGY++ LKR + +KID F Sbjct: 1375 LECEITEGTLMESPENGLQMMTRLRERGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAF 1434 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + DI + +D + +I ++A L VVAE VE + Q +L + + LQG+L RP Sbjct: 1435 IDDIAKSNVDRHMAAAIINIAHNLGLKVVAEGVEEEAQLDILRRYDCEMLQGFLYSRPLN 1494 Query: 727 LA 728 Sbjct: 1495 AE 1496 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 104/589 (17%), Positives = 204/589 (34%), Gaps = 25/589 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 L L + ++ RM H +R + Sbjct: 412 TLASETLWILDSGKVMSRDESGCPLRMCG-IHTDITDRKRVEESLKLAASVYNNSREAMS 470 Query: 223 LSVL-LLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + L++ I GY I R + + AV Sbjct: 471 VQDDKGLIININAAFTDITGYTESEVKNQNIKILQCSRNNRSAYEQMHMAVEEEGRWQGE 530 Query: 279 QNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + E+ + L L + + + + + QA D LT LP Sbjct: 531 VWLRRKNGEEFVVWLTLNALFDAEAQTQRHVALFSDITEKKQAEKIIWKQANYDTLTGLP 590 Query: 336 NFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R L +E + L +D + ++ G M + + L + Sbjct: 591 NRRMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTLGHDMGDMLLSEAAKRLKACI 650 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 ++++ + +L G E +VLSG + + + + + + + Sbjct: 651 RDSDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAEPYNLGEETAYISASIGITLY 710 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + T++ LL + + ++ L+ +R+A+ + Sbjct: 711 PDDASTIEGLLKHADQAMYAAKDEGRNR-FHYFTPSMQRYAKYRMRLIQDLRSAIADHEF 769 Query: 505 LLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LY QPI + +G + ++ G+++P +F+ + + L V + + Sbjct: 770 ELYYQPIVSLQGGLGLKAEALIRWRHPKRGLVSPIEFIAVAEETGLIIEIGNWVFQQAAR 829 Query: 562 WLATHPCD-KKGPRFSVNLMPLTLLQKN-IAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 A + S+N P+ + + L K +++ + +EITE Sbjct: 830 QSALWRDRFGIEVQISINKSPVQFRDEGESINSWVNLLKTLNLTNNNICIEITEGLLLDG 889 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + + Q G +I++DDFGTGY++ LK+ D +KID F +++ +N+ D + Sbjct: 890 NSAISSKLTQYRDSGIQISLDDFGTGYSSLAYLKKFDIDFLKIDQSFTRNLDSNSDDFTL 949 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I +A + V+AE VET Q+ +L G + QGYL RP P+ Sbjct: 950 CEAIIVMAHKLGMKVIAEGVETDYQRKILANAGCDFGQGYLFSRPVPVE 998 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 111/566 (19%), Positives = 202/566 (35%), Gaps = 43/566 (7%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 +R ++ + + +L ++F Y PVF + + Sbjct: 245 RKRSQEQVKNQKAFYEFILDNLDSDIAVL------NSNFEYEYTNPVFLSNREIRKWLYK 298 Query: 260 YPFLNLTWAVSTLCLLNYNQN----FLQGVETEYSLAFILAVLISFSVC----------- 304 ++L + + ++ Sbjct: 299 KTDVDLAEKLDLPQEFYERRKKFLDIAAKNNEIVEFEELIQDQNDKVTYLLRKYIPIDDS 358 Query: 305 ------LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------K 350 + + R A D LT L N Q Sbjct: 359 ETNQKRFISFGVDITERKLSEERITYLAYYDALTGLANRTLFIDHANQALKNHKSTETLL 418 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 +F IDN +F++ G ++ + L +M E + + + G E ++ Sbjct: 419 AFYFFDIDNFKFINDSLGHTKGDILLQMVGARLKRVMTEVDTVARFGGDEFAILKVDVSN 478 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + S+ H L + T LL ++ Sbjct: 479 KSSAAEFAQKILDILSQPFHIMGRDLFTTISMGIALSPNDGVTSAELLKNSDMAMYKAKE 538 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + ++ K++ + N++R A+ +LLL+ QP + + G + ++ Sbjct: 539 LGRN-NYKFYTNELILRSEKRLYIENSLRKAIQNEELLLFFQPKISTITNQVCGAEALIR 597 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 + G + P +F+P+ + R VLE + S+N+ Sbjct: 598 WKHPERGWVPPIEFIPVAEDSGIIERIGDWVLEEACRLKKQWSEKNLPSFPLSINVSGKQ 657 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L + N + R+ +Y I+P+ + LE+TE N E S+ E L + G +++IDDFG Sbjct: 658 LARANWSHRVQATILQYGINPEEIELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFG 717 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK++ AD+IKID FV D+ N D I ++I ++A + L V+AE VE Sbjct: 718 TGYSSLSYLKKINADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPA 777 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ LLH LG +QGYL +P P + Sbjct: 778 QRDLLHDLGCHMIQGYLYSKPLPEDE 803 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 97/559 (17%), Positives = 191/559 (34%), Gaps = 28/559 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWL-AALSVLLL-----LLCTPYENDFIAGYLVPVF---F 248 + E R L + + + +L I GY Sbjct: 281 TMLDITERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDAFSTITGYQADEIVGQN 340 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 + + + + + ++ L + Sbjct: 341 PRLLKSGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLVTEWLSISSLRDTTGTASHY 400 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRI 357 + + + R + D LT LPN + Q G + L + Sbjct: 401 IGIFSDLSERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQALLTARRFERGTALILLDL 460 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 + ++ G + + R L ++E + + + G+E V++ E + Sbjct: 461 NRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNEFGFVMANLSHERDALAL 520 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + S + + F N E + +L ++ Sbjct: 521 AQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGEAMLRSADAALLRAKQSGRN-TF 579 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + +++ + + +R AL + + ++ QP + G + +L G Sbjct: 580 SFYSPEMDADAARRLSIESALRDALARDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLG 639 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIA 590 ++P +F+P+ + L + VL + +VNL P Q ++ Sbjct: 640 PISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVAVNLSPRQFRQADLP 699 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ + A+ LEITE + + ++ +L G ++++DDFGTGY++ Sbjct: 700 AQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLA 759 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 + R D IKID FV+DIV N ++A I + + ++ +LSV+AE VET+ Q A L Sbjct: 760 YVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRS 819 Query: 711 LGVQYLQGYLIGRPQPLAD 729 +QGYL RP P + Sbjct: 820 RRCDAIQGYLFSRPLPPEE 838 Score = 44.2 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 14/182 (7%), Positives = 38/182 (20%), Gaps = 14/182 (7%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 G AD + V + L + + + + + + R IA + ++ Sbjct: 118 GAADYVSKPVKMSVLIARIRAHLEVRRAQWLLANQKAWLEQEVERRIAENTQLDRHLTLA 177 Query: 218 SWLAALSVLLLLLCTPYE--NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + + ++ + L L +P L Sbjct: 178 LERSGFGIWEHDPVRNRNRWSEGLRQMLGYEQEPEQLAESMNLIHPEDRPAVEAQVTASL 237 Query: 276 N-------YNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHL 324 + ++ ++ + + H Sbjct: 238 RDRNSILIGEFRIRHHDGGWRWVESRGRIVEFDEAGQPTLMIGTMLDITERKLAEAE-HR 296 Query: 325 QA 326 A Sbjct: 297 LA 298 >UniRef50_A6CIW9 Sensory box protein/GGDEF domain protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CIW9_9BACI Length = 706 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 91/565 (16%), Positives = 198/565 (35%), Gaps = 26/565 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGY 242 R++ ++ +L + ++ +L+ + + GY Sbjct: 135 RVLFGSVIDITEQIEAQQMLEESNEKYKSLFESSPDAMYSMDENGILIDVNPAGEQLIGY 194 Query: 243 LVPVF--FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV--L 298 L + + + + ++ + + + Sbjct: 195 STKEMKGMPFMPLVASEDLPEAIKHFESAKVGEPSSAELVLIRKDSQKIHVEATHYPMKV 254 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------- 351 V R + + + + A DPLT LPN + E Q + Sbjct: 255 NGEIVGTYGTARDITKKKLYDEKMRELAFYDPLTRLPNRKLFEDRLGQIIKLAKIEEKLF 314 Query: 352 -FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +D +F++ G + ++ + L ++ + L +L G E ++L T Sbjct: 315 SVIFLDLDRFKFINDSMGHHIGDEFLKLVADRLKQSIRSTDTLSRLAGDEFTILLPDI-T 373 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E + + + + + L + G + ++ + Q+ Sbjct: 374 EEDVISIAERINQSLAEPFQVSGHWLSVSASIGIAFSTGKNVGVSEIIHRADTAMYQTKK 433 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 + + T+ +++ + A+ +L LY QPI N + + ++ Sbjct: 434 F-RRSQYTIYSDEMEVDTSYNLIIERDLPLAVINNELELYYQPIMNLESEKVIAMEALIR 492 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT 583 + G++ P+ F+ + + VLE+ + +VN+ Sbjct: 493 WHHPELGMVAPNDFIRVAEECGQIIPIGNWVLETACIQNKKWQDSGKPPFKVAVNVSTKQ 552 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L Q + + ++ + + + + LE+TE + E ++ +L G I+IDDFG Sbjct: 553 LQQYDFVDSVKKVLAKSGLEAKWLELEVTESILLDDVEEIKESLTRLRGIGVSISIDDFG 612 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY + L++ D +KID F+ DI + I +I LA + +++VVAE +E + Sbjct: 613 TGYTSLSYLRQYPFDTVKIDKSFIDDISRDLHGKRITSAIISLAHSLNMNVVAEGIEGET 672 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 + L + QGY +P P+ Sbjct: 673 ELIFLKREKCDAGQGYYFSKPIPVH 697 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 95/571 (16%), Positives = 209/571 (36%), Gaps = 35/571 (6%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + RM+ ++ R + E + A + + + V Sbjct: 363 AVWRMVRDISEKRVAEERMQLAAKVFENTVEGIMITDADKRIRSVNRAFSQITGFGQQEV 422 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SF 301 + + A++ + Y ++ + Sbjct: 423 LGQKPDMLSSGRHDETFYEAMWSAINEHGSWQGELWNRRKNGEVYPEWLAISAVRNAVGE 482 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQEAGKSFCCLRI 357 + + + + R A D LT LPN ++ + Sbjct: 483 ITHYVAIFSDLSERKAADERIQFLAHFDVLTGLPNRAHIQDRVELAIQNATR-------- 534 Query: 358 D------------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 D + ++ G ++ + + + E + + G E +++L Sbjct: 535 DNERLALLLLDLDRFKTINESLGHSAGDALLQVLAERIRSTLLTGEVVARQGGDEFIVLL 594 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G + + N + + F + + L+ Sbjct: 595 PLIADPGSAALAAERIREVLEPPVELFNHSISITPSIGISVFPDDGRDFETLVRNADAAM 654 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 + + + ++ + + + + + +R ALD+ + +L+ QP + E G Sbjct: 655 YHAKSAGRN-SYKFYTADLNARAREILEIESQLRYALDRDEFVLHYQPQVDLKTGEIIGA 713 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVN 578 + ++ + G++ P +F+ + + + V++ + LA +VN Sbjct: 714 EALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVN 773 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L L Q+++A + R + + + +E+TE + E++++ I+++ G +++ Sbjct: 774 LSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLS 833 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR +AD +KID FV+DI + D+ I R+I ++AK +++V+AE Sbjct: 834 IDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEG 893 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET +Q L + G QGYL+ +P P + Sbjct: 894 VETIEQWKFLDREGCHAAQGYLLAKPVPAKE 924 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/159 (10%), Positives = 39/159 (24%), Gaps = 14/159 (8%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 L L ++ R E + L W +++ L D Sbjct: 228 RLIDELRAKTLALESDIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQV-IDANP 286 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN----------YNQNFLQGVETEYS 290 +L + + + L + + + L N + +++ Sbjct: 287 AFLNLMCYSLDQLKLQNFWSLIAPESEGMERFNLDNKVLRFGYCDEFEASYINRFGNVVP 346 Query: 291 LAFILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQA 326 ++ + + + VR R L A Sbjct: 347 VSVKTVAMRDSFGRINAVWRMVRDISEKRVAEERMQLAA 385 >UniRef50_C4KD26 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Betaproteobacteria RepID=C4KD26_THASP Length = 703 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 112/610 (18%), Positives = 197/610 (32%), Gaps = 31/610 (5%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 L ++ A + F A I L + R ++ A R A Sbjct: 76 ALPILMVTGMDDTASIEAAFEAGATDFVAKPISWPLLGHRVRYVLRATRAATALRMANAR 135 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + + ++ L + + V + ++ Sbjct: 136 NAAMLDAFPDTLLRLDAADRIVELRA-APTGVPSCCMPAVGQTLAEAYPHEVATLLAQAL 194 Query: 267 WAVSTLCL-LNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + ++ + L ++R + R H Sbjct: 195 DEARRSRQPSTVDFPLACRTGRPCHQEARVSAIDDGEA--LCLLRDITERKEYETRIHHL 252 Query: 326 ALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT L N R+ + E+E + L +D + ++ G ++ Sbjct: 253 AYFDSLTGLANRRSFLERLEREIRRALQNKWRLAVLFLDLDRFKSINDTLGHAAGDALLQ 312 Query: 378 SICRTLLPLMQENEKLY------------QLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 L + + + + +L G E ++L + + + Sbjct: 313 QAAERLRAITRPGDIVAHDTDRMGTAEFARLGGDEFTVLLPTISRPDDALAIAERIRASI 372 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 L + F + E L+ + A+ ++ Sbjct: 373 CAPFAIEGQELCVTTSVGIAVFPDDGEDAATLIKHADIAMYDAKANGRNGC-RYYNPALT 431 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 + +V L +R AL +L+L QP + + ++ DG ++ P +F+ Sbjct: 432 AEAVHRVELEAGLRRALAHDELVLMYQPQVEVRDGSIATVEALVRWQTPDGRLVPPLEFI 491 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 P + L VL A R +VNL P+ + RI Sbjct: 492 PFAEECGLIDAIGSWVLRRACHDAAQWQRRGLDLRVAVNLSPVQFRASGLLDRIREALAD 551 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + + + LEITE ++ + + L G IA+DDFGTGY++ LKRL D Sbjct: 552 SDLPAERLELEITESALMADDADTHATLAALRTLGIGIALDDFGTGYSSLSCLKRLPLDK 611 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV + + + IVR+I LA+ + AE VET Q LL +L LQGY Sbjct: 612 LKIDRSFVSGLPDDVDNHAIVRAIVALARHLGFRIAAEGVETAAQAELLGELEADSLQGY 671 Query: 720 LIGRPQPLAD 729 L R P A+ Sbjct: 672 LFSRAVPAAE 681 >UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9K4_9GAMM Length = 938 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 101/595 (16%), Positives = 209/595 (35%), Gaps = 36/595 (6%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAAL 223 + + + L + F + + ++ L + + + Sbjct: 322 LLIEFSLLSCLSLIITFGVALWLRKAFMSYHTHSQKQHELLLQNKTELELSARVFDSTSE 381 Query: 224 SVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 +++ ++ I GY + ++ A++T L Sbjct: 382 GIMITDEFNQIITCNSSFCRITGYSKEEIIGLTPNTFASGLTDPDIYSDMWHALTTKGLW 441 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + + V + + + + A D LT Sbjct: 442 QGEVINQHKQGHLFPEWLSINVYKDKQGKAINYIGTIVDISKRKQAENTLQHLADYDSLT 501 Query: 333 LLPNFRALEQAPEQE-------------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 LPN R ++ + + L +D +F++ G ++ I Sbjct: 502 DLPNRRFFKEQVDHIIEIDKQRKPTEPINKFALLFLDLDYFKFINDSLGHSAGDKVLKII 561 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMG 436 LL +N + +L G E ++VL +E ++ L + ++ L + Sbjct: 562 ASRLLEHKDKNTIISRLGGDEFVIVLQDIASEKAVKQFCFELMQNIEKPMNILGRSLIVT 621 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + + LL ++ + + ++ K++ L N +R Sbjct: 622 PSIGATLYPKDGNRTNILLKNADAALYRAKENGRN-NVQFFTANLNRDALKRLSLENDLR 680 Query: 497 TALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL++ +Y QP N + G + ++ G ++P +F+P+ + + Sbjct: 681 RALNRNQFEIYYQPQVNLNTKQVIGCEALIRWHHPTKGFVSPIEFIPIAEETGIINEIGE 740 Query: 554 QVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 +L + A + + ++NL + +++ + + + LEIT Sbjct: 741 WILFEACQQAANWCNEYGREIDIAINLSARQF-DDTLVSTVLKALNQSQLPSHCLTLEIT 799 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + E ++ + QL + ++A+DDFGTG+++ LKR D +KID FVKD+ Sbjct: 800 ESILVQDPEQVIHTLTQLRQSSIKVALDDFGTGFSSLSYLKRFPLDKLKIDRAFVKDLPN 859 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 NT D I+ S+ +AK L+ +AE +E Q+ALL L QGY +P Sbjct: 860 NTDDGAIIASVLAVAKHFQLTTIAEGIENTDQEALLEALNCTQGQGYFYDKPLTA 914 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 102/556 (18%), Positives = 202/556 (36%), Gaps = 26/556 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSV-LLLLLCTPYENDFIAGYLVP--VFFIIFTL 253 ++ + + ++ + GY V + Sbjct: 120 ITERQKAREQMKIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQPSYIF 179 Query: 254 GVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMV 309 + F W V + + ++Y + V+ + + + Sbjct: 180 RSDRHDADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVF 239 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLE 361 + + QA D +T LPN + E+ + + +D+ + Sbjct: 240 SDITQRKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEHAKQSGRPMALMLIDLDHFK 299 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + ++ L +Q + + +L G E ++L+ G + L Sbjct: 300 SVNDSLGHRAGDALLLAVSNRLTDCVQGADTIARLGGDEFAIILTDLHQNGDSGCLARTL 359 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 ++ + + + + F + +TL+ L + + + Sbjct: 360 LAQLAQPFNIDGESMLVSASIGIALFPNDSDTLEELFKNADQAMYAAKSAGRN-CFNYYT 418 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + ++ L N +RTA+ G +Y QPI + + ++ G+++P Sbjct: 419 PALHQAARARLRLTNDLRTAIQCGQFEVYYQPIIELSTNKVVKAEALVRWRHPIRGMISP 478 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGR-I 593 +F+PL L V + LA + ++N P+ L K+ Sbjct: 479 AEFIPLAEDTGLIVPLGDWVARQAITQLAQWRKIFDPHFQVAINQSPVQLRSKDFTEMTW 538 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ ++ + AVI+EITE + N+ G +IAIDDFGTGY++ L+ Sbjct: 539 VQELAQHGLEGNAVIIEITEGLLLNAESRVNDNLHLFRDTGIQIAIDDFGTGYSSLAYLR 598 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D +KID FV+D+ + + + +I +A + L VVAE VETQQQ L ++G Sbjct: 599 KFDIDCLKIDRSFVEDL--DGVGFELCVAIIAMAHSLGLKVVAEGVETQQQCDTLARIGC 656 Query: 714 QYLQGYLIGRPQPLAD 729 Y QG+L RP P + Sbjct: 657 DYAQGFLFSRPVPAPE 672 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 96/586 (16%), Positives = 185/586 (31%), Gaps = 28/586 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 VVD + R I + R + + Sbjct: 486 VLVVDYAFRPILEGGQVRGGVFSCRDITGRKRIEESLRLHAQVFDTATEGVMIADARGRI 545 Query: 224 SVLLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 L + + GY + + + + + + + Sbjct: 546 ------LSVNRAFEQVTGYSAEEVVGRNPSILSSGRQDKAFYRRMWDTIKGEGIWSGEIW 599 Query: 281 FLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + Y ++ + + + + + + A DPLT L N Sbjct: 600 NRRKDGEIYPEWLTISSIAGPNGEASHFVAVFSDITAQKRSEQEIDFLANHDPLTGLANR 659 Query: 338 RALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 E + +D ++ G +R R L +++ Sbjct: 660 NLFEDRLAHAISMAGRNGQHVGLLLVDLDRFRLINDGMGHGPGDALLRETGRRLGHCVRD 719 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDG 446 ++ + +L G E ++L G + + L F Sbjct: 720 SDTVARLGGDEFGIILEGLADAADAGMQAERILEAMRAPLRLGGQELFCTVSIGIAVFPA 779 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + LL + ++ ++ + +R AL++ +L L Sbjct: 780 DGTDAATLLRHADTAMALAKREGRN-NFQFYTHALTEAVFSRLNIETGLRHALERDELRL 838 Query: 507 YAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 + QPI + + ++ + G+++P F+P+ Q +L L S + Sbjct: 839 HYQPILDAASGRIAAMESLMRWQHPERGLVSPGVFIPVAEQSDLILALGRWALVSACAQV 898 Query: 564 ATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 SVN+ Q ++ + + + PQ++I+E+TE Sbjct: 899 RAWSDAGLEPVPVSVNIPACHFRQPGFVEEVLGVVRETGVQPQSLIIELTESALMEPVSL 958 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + I +L G +AIDDFGTGY++ L+R + +K+D FV + + I + Sbjct: 959 AEERIRRLRDTGVVVAIDDFGTGYSSLGYLQRFHVNYLKVDRSFVSGLPGDENARAITEA 1018 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + ++ + L VVAE VETQ Q L G +QGYL GRP Sbjct: 1019 VIGVSHSLGLQVVAEGVETQAQLDHLRATGCDKVQGYLTGRPVTAE 1064 Score = 43.4 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 12/151 (7%), Positives = 33/151 (21%), Gaps = 5/151 (3%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R + AQ + + ++ + + + G + Sbjct: 383 RRQAEAEVLAQSRRQAQVLEAVDEAIFGLDADCRVEFANPAAEALAGCSIGQMRGQRLSG 442 Query: 247 FFIIFTLGVGKLRYPFLNLTWA--VSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFS 302 I P + + ++Q + + ++ Sbjct: 443 VLQIRDDQGRSAWEPDGDCLAEDPMPVSIRRAFDQTLYHRDGRVLVVDYAFRPILEGGQV 502 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQAL-TDPLT 332 ++ R + + L A D T Sbjct: 503 RGGVFSCRDITGRKRIEESLRLHAQVFDTAT 533 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 105/551 (19%), Positives = 209/551 (37%), Gaps = 27/551 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 + ++A + VL+ ++ I GY Sbjct: 195 QQRANDESLRQAAAVFDATQEGVLVTDPEQRIVHVNPAFSRITGYSAEEVLGQHPTLLKS 254 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRI 311 + +L A+ + + Y + V+ + + Sbjct: 255 GRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISHYVAVFSD 314 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFM 363 + R A DPL+ LPN + + + +D+ + + Sbjct: 315 ITALKRSQRELDYLAHHDPLSNLPNRLLFTERIAHALERSKSEQLRGAVLLIDLDHFKHI 374 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + G + ++S+ L + L +L G E L+ + + L Sbjct: 375 NESLGHNVGDLLLKSVGERLQQDLPGGCTLARLGGDEFGLLSETCADAPQAAELAQNLLR 434 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + L +G F + ++++ +L ++ + + Sbjct: 435 CLEAPFRLDEHELYIGASIGISLFPDDADSVEQVLRNADSALFKAKSSGR-EGYAFYVQE 493 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 ++ ++V L +++R ALD +L ++ QP+ + E G + ++ G++ P + Sbjct: 494 LTDYARQRVELASSLRHALDNHELRVFYQPLHDLENGNPVGMEALVRWQHPQRGLIPPAE 553 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + D VLE + + R +VN+ + + ++ ++ Sbjct: 554 FIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEGSALRFVAVNVSSRLFSRGELDLKVAQV 613 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +SPQ + LE+TE + ++++ + +L G R+AIDDFGTGY++ RLKRL Sbjct: 614 LAETGLSPQQLELEVTESAIMEDPDAALSLLTRLRALGVRLAIDDFGTGYSSLARLKRLP 673 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +K+D FV+ + + DA I R++ L + L+V+AE +E+ Q L LG Y Sbjct: 674 VDKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLGLNVLAEGIESPAQVDFLRALGCDYG 733 Query: 717 QGYLIGRPQPL 727 QGY GRP P+ Sbjct: 734 QGYHFGRPAPV 744 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 92/569 (16%), Positives = 198/569 (34%), Gaps = 29/569 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 ++ R I A+ + ++ + + + I+GY Sbjct: 267 LLFVMRDITERRKAEKQLKILSQACEQSPA---SIVITDVQGNI---TYVNPKFEEISGY 320 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 K + + + +++ + + + Y ++ + Sbjct: 321 KSAEVLGRNPRILKSGNKTQEDYELMWKTLASGRNWHGEFHNRRKNGELYWERASISPIS 380 Query: 300 SF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + + + QA D LT LPN + Q+ Sbjct: 381 NQQGIVTHYVAVKEDITKEKQQAEALFHQAHYDHLTGLPNRILAKDRLQQAIESALRQKH 440 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 L +DN + ++ G + + L +++ + + +L G E L++L Sbjct: 441 IFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSERLQRALRQTDTVARLGGDEFLIILDQV 500 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 +L + L + ++ + F + LL + Sbjct: 501 SHSRKLMAIAQRLLRVMRQPVNLQGLEFFVHGSIGITVFPDDGFHADVLLRNADTAMYAA 560 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + ++ +++ + + +R L + + + QPI + + G + + Sbjct: 561 KLAGRNM-FRFFTPHMNQAAQQRMAIESELRQGLSRQEFQILYQPIVSLESGQIVGAEAL 619 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLM 580 + G + PD+F+P+ + L +L+++ A SVN+ Sbjct: 620 MRWHNRLLGTVPPDQFIPIAEEVGLIVELGEWLLDNVCCQAAHWHSALGEQTFWVSVNVS 679 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P L + +RY + P+ + LEITE + N+ L + +++D Sbjct: 680 PRQLKDSYFVAILQGFLQRYQVRPEWLELEITENLILEENGDLLKNLSDLEEENIALSLD 739 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L++ + +KID FV+ + + +VR+I +A L V+AE +E Sbjct: 740 DFGTGYSSLNYLRKFNFNSLKIDRSFVELLPHDNNTVGLVRAIIAMAHHLELKVIAEGIE 799 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T +Q L G Y QGYL + + Sbjct: 800 TPEQWNFLRLQGCDYGQGYLFSPAIAVEE 828 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 111/560 (19%), Positives = 225/560 (40%), Gaps = 34/560 (6%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPV-----FFIIFT 252 K ++ + ++ + +L I GY ++ Sbjct: 536 AEKALSDKSRQMEAVVEGLLDGIITIDGRGKILTFNQAAQEIFGYTEDETLGKNISMLMG 595 Query: 253 LGVGKLRYPFLN--LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMV 309 + +L+ + VS + L+ + + + + + + V + +V Sbjct: 596 SPHREHHDSYLSNYIERGVSEITGRIRELEALRKDGSMFPIELGIVEVQMAGEVNFIGVV 655 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 R + H A DPLTLLPN R L + L +DN + Sbjct: 656 RDITERKQRENEIHQLAFYDPLTLLPNRRLLLDRLTEAINHSVRTRNFSALFFLDLDNFK 715 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GRLQH 416 ++ G + + L+ +++ + + +L G E +++ S E + + Sbjct: 716 NLNDSAGHNKGDLLLGQVAERLVNSVRQGDTVARLGGDEFVIIASDLSHEPTLAANQAER 775 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + +R+ + + + F+ + LL Q ++ Sbjct: 776 LAQKIVSNLTREYNLDGLTYNSSASIGVTLFNSENLPKEDLLKQADMAMYKAKYAGRN-G 834 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGG 531 + + + + + +++ + +A+ +L+ Q N + G + +L + + G Sbjct: 835 VQFFDPQMQVSVSSRASIVSDLYSAIQSQQFVLFYQKQVNHLKQCIGVEVLLRWIHPEKG 894 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNI 589 +++P +F+PL + L VLE LA +K+ +VN+ + + N Sbjct: 895 MVSPLQFIPLAEETGLIVPIGEWVLEEACATLAKWSLESEKQHLSIAVNISVVQFSKDNF 954 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ K +PQ + LEITE +N +++L + G +IDDFGTGY++ Sbjct: 955 VQTVLNALKTSGANPQLLKLEITETLLANNIPDVKAKMKELQQHGVTFSIDDFGTGYSSL 1014 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+L + +KID FV+DI+ ++ D I +++ LA + L V+AE VET+ Q+ALL Sbjct: 1015 SYLKQLPINQLKIDQGFVRDIINSSNDRAIAQAVITLADSIELQVIAEGVETEAQRALLQ 1074 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 +G QGYL G+P + + Sbjct: 1075 SMGCHTYQGYLYGKPCRIEE 1094 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 109/596 (18%), Positives = 206/596 (34%), Gaps = 32/596 (5%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 + + LL+L L+ Y R+ P E++ + Sbjct: 128 VSRSLQPVLIKTLLALIGGALVGA---YAFFRLRTVP---LRALDEAYRVLKQSEEKYRS 181 Query: 217 LSWLAALSVLLLLLCTPYE--NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + + L + D + + P +F + L + C Sbjct: 182 VYESLNEGLALYRASRREDGSADLVLTDVNPAAINVFGFSRDDIGGWITELLDGLFAECA 241 Query: 275 LNYNQNFLQGVETEYSLA-------FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 E L F L + ++ + + A Sbjct: 242 EQVFGALQARGEVSLDLEQNSTGRIFSLTAFPMGYGMVATLLEDVTEKKRTAEQLERLAY 301 Query: 328 TDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT L N R L EQ + + ++ + ++ G + + Sbjct: 302 YDSLTGLLNRRMLLDRMEQAIGTAQREGVKVATLFMDLNGFKVINDTLGHKAGDQILVEV 361 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--Q-IHWNNTGLDMG 436 + L ++++ + L +L G E ++ + E + + L + + + +G Sbjct: 362 AKRLQKMVRKRDTLARLGGDEFVVAAT-FEKDENASAIAKNLINAITPVYQVCDREVYVG 420 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F + + + LL + + ++ + +++ L +R Sbjct: 421 VSVGISIFPDDGDVPETLLKNADIAMYNAKSQGQG-GFCFYSAQLNERLHERMQLEFKLR 479 Query: 497 TALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 A+++ + L QPI + + +L + G + PD F+PL + Sbjct: 480 GAVEREEFFLEYQPILDSKTGRITAVEALLRWNDPEKGRVMPDSFIPLAEDTGVILPLGE 539 Query: 554 QVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + L R +VN+ Q +++ + + + P + LE+T Sbjct: 540 WVLRTACAKLRQWQDAGVMPVRMAVNISGRQFTQGDLSKTVEDALLQSGVHPSWLELELT 599 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E N E ++ + +L I+IDDFGTGY++ + LK D +KID F+ ++ Sbjct: 600 ETCLIKNVEETVRKLCRLKGLCVSISIDDFGTGYSSLQYLKNFPIDHLKIDRGFINNVCE 659 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D IV +I +AKA L V+AE VET+QQ L + G QGY RP P Sbjct: 660 LPDDRAIVDAIIGIAKAMDLHVIAEGVETRQQAEHLMRRGCDEFQGYYFYRPLPEE 715 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 107/559 (19%), Positives = 216/559 (38%), Gaps = 30/559 (5%) Query: 200 WRRDIAPSLGKEKRAFTL---SWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFIIF 251 RDI E+R TL + +SV++ L + + GY Sbjct: 317 ISRDITEKRKAEERILTLSQAVEQSPVSVVITNLKGEVEYVNSTFESVTGYSQAEVLGKD 376 Query: 252 TLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCL 305 + + + P + ++ + + + +A + Sbjct: 377 SSILKSGKTPPGRYADMWAKLVQGESWQGEFQNKKKNGEIFWEQAHIAPVLDAEGEVRHF 436 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRI 357 L + + + + + QA D LT LPN + +A + + L + Sbjct: 437 LAVKQDVTKQKAQEEKILHQAHFDGLTELPNRFLAMHRLETMMHEAKRNQHQIAVLFLDM 496 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G M + + L +++++ + +L G E +++++ E + + Sbjct: 497 DDFKKVNDTLGHDMGDKILVEAAKRLQGSVRDSDTIGRLGGDEFIVLINHLERPEQALPI 556 Query: 418 VNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 L + + + + + + G+ T LL S A + Sbjct: 557 AQNLLQQFRSSLTIDGRDILLTMSIGIALYPGDGTTPSELLRNADSAMYHSKAAGRN-SF 615 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + ++ + +++ L + ALD+ +L L QP+ + + G + +L + G Sbjct: 616 HFYTQEMNIEANRRLQLEEQLHNALDRNELRLLYQPVVDLKTRKIVGAEALLRWDSKELG 675 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 ++P++F+P+ L VL+ L+ + ++NL P ++ Sbjct: 676 AISPEEFIPVAEHTGLIVEIGKFVLDDALRTTSRWIKTFIPDFHIAINLSPRQFRDPHLI 735 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I Y + + + LEITE S I +L + G I++DDFGTGY++ Sbjct: 736 DNIESFVNSYGLEGRNLELEITEGVLMSQHADVEEAIAKLTQKGISISMDDFGTGYSSLS 795 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+ +I+K+D F+ DI + D +V + D+A L V+AE VET++Q ALL + Sbjct: 796 YLRSYPFNILKVDRSFINDISVDAADLELVNASIDMAHGLGLKVIAEGVETEEQTALLLR 855 Query: 711 LGVQYLQGYLIGRPQPLAD 729 QGY +P P + Sbjct: 856 KNCDMAQGYYFSKPIPADE 874 Score = 77.7 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 83/317 (26%), Gaps = 36/317 (11%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNF 79 + V L+ ++ ++P +I + W V++S+ ++ + + Sbjct: 43 ILVGLLGMAVMLTPWELIPGVFFDARW----VLISLCGLY----FGVIPTLIAVVMTVTL 94 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 L + +GS + + + LT W RL++LGL I + C Sbjct: 95 RLYQGGAGIYVGSAVIICSALIGLGWRAYIEKHNKALT----WWRLYFLGLSVQITVLCL 150 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 M+ P + A A ++ I ML + A+ Sbjct: 151 MFF------MPEHLRYKIIAAIAPTILIFYP-------IGTMLLGMILSRQEERRLAERE 197 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLG 254 + L + + L G+ Sbjct: 198 LHISRQILNRERGLLRGLIDALPDHIFIKDKEGKYLGCNKAFQSFTGHQEADLIGKTDQD 257 Query: 255 VGKLRYPFLNLTWAVSTLCLL---NYNQNFLQGVETEYSLAFILAV---LISFSVCLLYM 308 + + + + + + L N + + L LA + ++ + Sbjct: 258 FSESNHAITDKSDTLQVINNLLPINREAWTHEQDGSPILLESQLAPFLDMDGEPQGIVGI 317 Query: 309 VRIYHRSEWLNRRWHLQ 325 R R Sbjct: 318 SRDITEKRKAEERILTL 334 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 105/427 (24%), Positives = 186/427 (43%), Gaps = 16/427 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 ++ A DPLT LPN + E S + +D + ++ G Sbjct: 644 EHRKQLSYLAFHDPLTQLPNRLRFTEVLEAAVGDAEGHGRYLSLLFIDLDRFKNINDSLG 703 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + ++++ R L+ + L +L G E ++L T + S+ Sbjct: 704 HSIGDKLLQAVARRTGSLIDSADVLARLGGDEFAILLFNCVTPVVGADTAQRVIDALSQP 763 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 ++ L + + L+ ++ E ++ +T Sbjct: 764 FQIDDYSLHVSASIGITVAPVDAREPDELIKCADIAMFKAKDAGRN-TYKFYERSMNLKT 822 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 + +LL N +R AL + L LY QP + + G++ +L + G+++P +F+PL Sbjct: 823 HELLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPLA 882 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L +L S + + T + + R +VN+ ++ + ++ ++ Sbjct: 883 EETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQTG 942 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + + LEITE + +SS+ + +L K G R+AIDDFGTGY++ LK+ +K Sbjct: 943 VPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLK 1002 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV D++T+ DA I S LA L VVAE +E Q+Q L + G Q+ QGYLI Sbjct: 1003 IDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLI 1062 Query: 722 GRPQPLA 728 RP P+A Sbjct: 1063 SRPLPVA 1069 Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 34/324 (10%), Positives = 72/324 (22%), Gaps = 17/324 (5%) Query: 17 AFTLTVVLIQLSRFISPLAIIHS---SYIFLAWMPLCVMLS-----ILFIFGWRGVVPVL 68 L + L+R + + + + + I + V+ S +VPV Sbjct: 170 HQYLLFAYLNLNRLTALTSHLPTDSTAGIAVIGRNGRVLFSSGEPQASQHGDLSTLVPVQ 229 Query: 69 CGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWL 128 G+ +L + G+ + +L Q + + Sbjct: 230 RGLQGIEGHYNYLWNGDVHI--GNVLIIPETGWLVLVSQPKYLAYAEINYLQNLFLFGGV 287 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 V + + A + +S F + R Sbjct: 288 SCVVLSLLVAFAVARRLSQPMTQLETCVKEMARGEWDASVEVSGFAEAKALAQHVRAMGR 347 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I R A + + + + + GY F Sbjct: 348 AIQERETELSRERDRFQALFDNVNDAVFMCSVDEEQRVGNFVEVNGVASDLLGYSRAEFL 407 Query: 249 ------IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SF 301 I T+ LR +++ + + L L Sbjct: 408 QMTPMDIDTTIDSLSLRDHIGSISMESDQPIPGLIETTMVTKQGRKMPFEINLQPLRLDD 467 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQ 325 L+ + R + R + Sbjct: 468 QQMLVCVARNITDRKQAQRALNAL 491 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 91/550 (16%), Positives = 194/550 (35%), Gaps = 27/550 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 S+ + + A +++ ++ I+GY + Sbjct: 316 EKASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPSILRSE 375 Query: 259 RYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRI 311 + + ++ ++ + + + ++ Sbjct: 376 HHSNEFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDALTHFVSVIAD 435 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK--S----FCC-LRIDNLEFMS 364 + + A D LT LPN + + L +D + ++ Sbjct: 436 ISNIKASEEKLSHLAHHDALTNLPNRLLFSARLDHALTHREASEKIVMFHLDLDRFKHIN 495 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + L ++ + + L ++ G E +++ E + + + L Sbjct: 496 DSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAILVEELEHVSDAESIADRLVEA 555 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + + + L Q+ + + Sbjct: 556 MEQPFTLDGKDYFTTASIGLALAPDHGDDIDTLTKHADIALNQAKDSGRN-NFAFFQPEL 614 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 S + + L +R AL + L+ QP + G + ++ + GI+ P++F Sbjct: 615 SETVQEWIKLEPELRKALAENQFQLHYQPQVDSTGTAIVGAEALIRWHHPEMGIIPPNQF 674 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 LP+ + L + V+ + L+ L+ G R ++NL + ++N+ +++ Sbjct: 675 LPIAEEIGLMNKIGEWVMNTALEQLSFWRSRGLIGFRLAINLAGDQITKQNLPMVVMQAL 734 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + I + + LEI E + E + +QL + G +++DDFGTGY+ LK+L Sbjct: 735 EHFQIPAEMLELEILETFLMEHEEEATSTFKQLRELGVHLSLDDFGTGYSALSYLKKLPI 794 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +KID V+DI + D I +++ LA L+V AE VET+ Q+ L LQ Sbjct: 795 TKVKIDQSLVRDIPEDPNDEAIAKAVILLAHTLDLTVCAEGVETRAQREFLESENCDQLQ 854 Query: 718 GYLIGRPQPL 727 GYL +P Sbjct: 855 GYLFSKPIEA 864 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 116/561 (20%), Positives = 205/561 (36%), Gaps = 34/561 (6%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF--IAGYLVPVFFIIFTLGVGK 257 + R E R +LS L++ + ++ +P+ ++ Sbjct: 261 YLRVENQLRDSEARFRSLSDLSSDWYWEHDAQGRFTQLAGDLSVNGMPLSAVLGRTRWEI 320 Query: 258 LRYPFLNLTWAVSTLCL------LNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 WA L + + + + ++ + + Sbjct: 321 GALNMTEADWAAHRAVLAAQQPFRDLELQRRRADGSMHWISVSGVPVQGADGTPRGYRGV 380 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNL 360 R + + A D LT LPN R L + + + +DN Sbjct: 381 GRDITGRKQAEGQIERLAFYDALTGLPNRRLLLDRLQHATVAVTRSNTQGALLFIDLDNF 440 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ----- 415 + ++ G H ++ + L ++E + + + G E +++L+G Sbjct: 441 KSLNDTLGHDAGDHLLQQAAQRLKACVREVDTVARFGGDEFVVLLAGLSAAAAQASAEAA 500 Query: 416 ----HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 H+ + F + LL Q Q+ A Sbjct: 501 QVAKHIAAS-LGQPYALGGAVHHSTPSIGIALFGPQACRVDELLKQADLAMYQAKAAGRN 559 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYD 529 + + + + L +R L Q +L+L+ QP+ + +G + ++ Sbjct: 560 TQ-RFFDPEMQAAASHRSALEADLRRGLQQRELVLHYQPMVDGQGRLQGAEALVRWNHPQ 618 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQK 587 G+M P +F PL Q L VLE+ L SVN+ Q Sbjct: 619 RGLMPPAEFTPLAEQTGLILPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQFRQA 678 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + +++ + +P+ + +E+TE ++ + + ++QL G A+DDFGTGY+ Sbjct: 679 DFVQQLLATLEASGANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGYS 738 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + +LKRL D IKID FV+D+ + D IVRSI LA++ L+VVAE VET+ Q Sbjct: 739 SLSQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLEF 798 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G Q QGY GRP P Sbjct: 799 LQHHGCQTFQGYHFGRPMPPE 819 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 107/564 (18%), Positives = 208/564 (36%), Gaps = 35/564 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 R + L + L++ L+ + G +F +G Sbjct: 688 ITQRRAMQQALDRQMALFGQLFEDSPLAIALVDTVG--RIAQVNGGFETLFGYKRAEILG 745 Query: 257 KLRYPFLNLTWAVSTLCLLN----------YNQNFLQGVETEYSLAFILAVLI--SFSVC 304 K F+ +S + + + + + Sbjct: 746 KDNRLFIVPEEQLSEINSIRQRILDGETVQRETLRRTSRGDIVPVNLLGHPVRIGGEITN 805 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCL 355 + ++ + + R+ QA D LT LPN + + + + Sbjct: 806 IFWIYQDISERKEFERQITHQAFHDSLTGLPNRSLFRERLGRAVERTKRRPDYHFAAMLI 865 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 ++ ++++ G + I L ++ + + +L G E ++L T + Sbjct: 866 DLNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGDEFAILLEEFRTNKEVI 925 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + R WN + G + + +L ++ Sbjct: 926 SVASRIQNEVRRAFLWNGKEIVSGASVGIVLQTRDCAGAEDILRDADIAMYKAKERGRGH 985 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + + + + + N +R A++ L L+ QPI + + EG++ ++ + Sbjct: 986 L--VFHNRMRQEVLEVINMENELRRAIEGNSLELHYQPIFDVDGGKLEGFEALVRWRHPE 1043 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK----KGPRFSVNLMPLTLL 585 G++ PD+F+PL + L V+ + + L + + G SVNL Sbjct: 1044 HGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLTMSVNLSCKQFA 1103 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + I+R + I+P + LEITE + ++ + +L + G +A+DDFGTG Sbjct: 1104 QHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLKEIGVLLAVDDFGTG 1163 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L++ DI+KID F+ T +A IVRSI D+A + L V AE VETQ+Q Sbjct: 1164 YSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRVTAEGVETQEQL 1223 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L + QGY+ +P D Sbjct: 1224 ERLQSINCDRAQGYMFSKPMAPGD 1247 Score = 55.0 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 10/174 (5%), Positives = 35/174 (20%), Gaps = 27/174 (15%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLL---LLLCTPYENDFIAGYLVPVFFIIFTL 253 +R E+ + A + Y + Sbjct: 560 ISERKRYENELRKAEENFRGIFENAVEGMFRTTPHGRYLQANPALAKIYGFESPAELMRH 619 Query: 254 GVGKLRYPFLNLTWAVSTLCL-------LNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 R ++ + L ++ + + ++ + + ++ Sbjct: 620 YDDISRQLYVEAGRREEFIRLLGEKEEIFDFESAIRRKDGSVIWISENARAVKDAAGNVV 679 Query: 307 ---YMVRIYHRSEWLNRRW-HLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLR 356 V + + + AL + E + + + Sbjct: 680 CYEGTVMDITQRRAMQQALDRQMALF----G----QLFED-----SPLAIALVD 720 Score = 52.7 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 26/286 (9%), Positives = 61/286 (21%), Gaps = 24/286 (8%) Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 + ++ G C + + + IL L T + Sbjct: 286 AVCIGLVAGAVCLGCELLLVRLRIDDAVGAVPVHLGCGIWGILAVALFGDPAVLQTGLSM 345 Query: 122 WQRLFW--LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD-------ADAIFTVVDLLSL 172 +L+ LG+ G+ + V F PL + D+ L Sbjct: 346 TGQLWVQCLGIFAAFGVAFVVPFVVLRFIDPLFPLRVAPEDEDTGLNVSEHGAHTDIHDL 405 Query: 173 FTAVLIYNMLFYYLTRMIVSP----HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 F + + R P + + + + AA ++++ Sbjct: 406 FEILDRQAATRDFSLRAPEEPFTEVGHIAHRYNHVLDALHDAVSKTEAIVKSAADAIIVF 465 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF----------LNLTWAVSTLCLLNYN 278 T G L + + + Sbjct: 466 TTDTLRIISANPGASFIFGHPALRLEGMTIPELLPAWGIPGSGDNEASLLHAMRSSNQVE 525 Query: 279 QNFLQGVETEYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRWH 323 + ++ +L ++ + R + Sbjct: 526 VTGRRANGSQVTLEAVITQSSGRQGDFFIGTFRDISERKRYENELR 571 >UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensors n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE1_9CYAN Length = 1090 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 104/560 (18%), Positives = 206/560 (36%), Gaps = 22/560 (3%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + + +F Q + KE L + L + + + VF Sbjct: 515 VRQTRNFLQTMIDHLPVAVFVKEAYQEKLGRFRLWNKACEQLFGLSAVEVLGKTVYDVFP 574 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM 308 + L+ + Q Q +++ L + LL + Sbjct: 575 PEQAEFFHQQDQAVLSAGKVLDIPEERVETQTLGQR--ILHTVKVPLLNHYPDTEYLLCI 632 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDN 359 + + + A D LT LPN + L +DN Sbjct: 633 GEDITKRKQAEDQLRHHAFYDTLTNLPNRALFLNRLAHSIKQVQQTSGELFAVLFLDLDN 692 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + +I R L ++ + L +L G E ++L + Sbjct: 693 FKRVNDSLGHQIGDQLLIAIARRLEGCLRSRDTLARLGGDEFTILLEQINNITDAIKVAR 752 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGR-FDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L+ + + + + +++ + LL ++ A Sbjct: 753 HLHQQLMLPFNLSGNEVFTNVSIGIALSCSRHEQHPEELLQNADSAMYRAKEMGKG-AYA 811 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + + Q +++ L + +R AL+ + +Y QPI + E G++ ++ L G Sbjct: 812 VFDTRMHRQAVERLQLESQLRRALELNEFQVYYQPIVSITTGEVIGFEALIRWLNPYKGF 871 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNI 589 ++P F+P+ + L ++ VL + L SVNL L + ++ Sbjct: 872 ISPALFIPVAEEIGLISKIGQWVLYQACEQLQVWRKQFPLFKNLTVSVNLSSQQLREPDL 931 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +I ++ + + LEITE N + ++ + Q+ ++++DDFGTGY++ Sbjct: 932 LEQIDQVLATTGLPSHCLKLEITESLLIENYDQALKILRQIQDRNIQLSLDDFGTGYSSL 991 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L R + +KID FVK + N + I+++I LA A +++ +AE +ET Q L Sbjct: 992 SYLHRFPINTLKIDRSFVKRLKQNHENTAIIKAILRLANALAMNTIAEGIETVFQLEKLK 1051 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 LG +Y QG+L + D Sbjct: 1052 GLGCEYGQGHLFSKALDAQD 1071 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 10/142 (7%), Positives = 25/142 (17%), Gaps = 14/142 (9%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--------LLCTPYENDFIAGYLVPVFF 248 I S ++ +++ ++ + I GY Sbjct: 376 IIATAVARQQSTESLYLMERAINASSNGIIITDATETDHPIIYVNAGFERITGYSKEEVI 435 Query: 249 I---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFS 302 F G L A+ + + +A + Sbjct: 436 EQNCRFLQGPQTDSSLVERLRTALLQGRECRVVIQNYRKDGRLFWNDLQIAPVFNDRGHL 495 Query: 303 VCLLYMVRIYHRSEWLNRRWHL 324 + + Sbjct: 496 THFIGVQNDITERYEAQEEVRQ 517 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/210 (11%), Positives = 49/210 (23%), Gaps = 14/210 (6%) Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 WL +V GI + ++ I+ + T +L + F Sbjct: 26 WLTMVVGSGILGTTLILRQSVFIQDPITQTVQLSLTGLTF----ALGILLGAIATRFISQ 81 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA--GYLV 244 ++ + P + + R F+LS F+ GY Sbjct: 82 LQVNAELETHSQIDPPQCQPFIQERDRFFSLSLDLLCIASFEGYFQRVNAAFVNTLGYTE 141 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCL---LNYNQNFLQGVETEYSLAFILAVLISF 301 + N+ + L++ A + Sbjct: 142 AELLSVPLWEFVHPDDQAATKAELAEIAQGKPSFNFENRYRCRDGDYRWLSWTSAPFVQE 201 Query: 302 SVCLLYMVRIYHRSE----WLNRRWHLQAL 327 + + R + L R QA Sbjct: 202 GLLY-AVARDVTEYKHSVAQLQSRIEQQAT 230 >UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacillaceae RepID=C5D6R4_GEOSW Length = 951 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 109/626 (17%), Positives = 219/626 (34%), Gaps = 34/626 (5%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 I ++ V F + + D D +L+L ++ I Sbjct: 318 ITTTLEQVAPTFTPFIFVELVIKDRDIRSATFSMLALSEGNQNGENSSASVSLSIPEMFQ 377 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV--PVFFIIFTL 253 + ++ S + +R + S+ Y D + P F I Sbjct: 378 GVMTLANLMSTSSREMERLRVHVQ-ISQSLFEHNTDIVYSTDLHGNFTNVNPAFEKILGY 436 Query: 254 GVGKLRY-------------PFLNLTWAVSTLCLLNYNQNFLQGVETE--YSLAFILAVL 298 ++ + + + YN + + + ++ Sbjct: 437 TKEEILHTNALKYMHPNDVPRVSRHFYRALRGKIQYYNLEIPTKSGETLLFQIKNVPIIV 496 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGK 350 V + + R + + A DP T LPN + A ++ Sbjct: 497 DGKKVGIYGIGRDITEQKKAEEKISYLAYYDPDTHLPNRTKFMEIIDEQLEKAKQKNRKL 556 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G ++ + + + ++ L + G + L+L+ Sbjct: 557 AVVFIDLDRFKLVNDSIGHYAGDEILKQVVQRIQHVLPAGAYLGRFHGDKFCLLLTERTD 616 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + ++ I + N + + + LL ++ Sbjct: 617 SEGVFKTAAHISKEVMKPIVYENKEFFITISIGISFYPNDGVDKHSLLKNADIALNKAKQ 676 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + ++ +T ++ + +R AL+ + L QPI + G + ++ Sbjct: 677 SGGNR-IQFYSAKMNEETLYRLEMERYLRKALENQEFFLCYQPIIDIHKGVIVGNEALIR 735 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLT 583 G++ P++F+ L + L VL + K + SVN+ Sbjct: 736 WRHPKLGLVRPNEFISLAEETGLIHEIGRWVLVTACKQTKKWQQLWNQQLFVSVNVSARQ 795 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + + ++ +SP + LE+TE N S+ +++L + G IAIDDFG Sbjct: 796 FQHEGFIDDVKQALEQSQLSPNCLHLELTENSMLRNLHYSIQVMKELQQLGVGIAIDDFG 855 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 +GYA++ LK L +I+KID FV+ + TN+ D IV++I + L VAE VET + Sbjct: 856 SGYASFSYLKNLPVNILKIDRSFVEQMHTNSSDIAIVKAIITMGHGLGLKTVAEGVETVE 915 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q LL L + QGY + RP + Sbjct: 916 QLELLKMLHCHHAQGYALYRPVTAEE 941 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 128/629 (20%), Positives = 232/629 (36%), Gaps = 35/629 (5%) Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 S L+ S L+ + R++ Sbjct: 468 ASDVLSAELLQSLHPHMLQALQGRPVVFDYRSPYRGAGPEFFHTTIIPETGPDGRVVAIM 527 Query: 194 HFAQILWRRDIAPSLGKEKRAFT--LSWLAALSVLL------LLLCTPYENDFIAGYLVP 245 FA + + ++R+ L V L L C P ++ Sbjct: 528 VFAVDVTEQKHLALELSQQRSRLASLVNAIPDVVFLKDAAGRYLSCNPVFERYLGRRERD 587 Query: 246 VFFIIFTLGVGKLRYPFLNLT--WAVSTLCLLNYNQNFLQGV----ETEYSLAFILAVLI 299 + + + + + A++ L Y + ++ + + Sbjct: 588 IVGLGDEELMTPVEAARVRQLDERAMAAWQPLVYEETLTFAEDGYAGYFETIKTPIRDMH 647 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKS 351 LL + R + ++ L A D LT LPN R L E + Sbjct: 648 GHVTGLLSVSRDITDRKKAEQQIELLAFFDALTGLPNRRLLLDRLQRAGAACQRNEKLGA 707 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G M + + + L ++ ++ + + G E +++L G + + Sbjct: 708 LLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFVVMLEGLDAD 767 Query: 412 GR-----LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + L ++ F + T+ LL + Sbjct: 768 TALAALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTVDELLKRADLAMY 827 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDE 521 Q+ A + + Q T + L + +R + + +L ++ QPI + G + Sbjct: 828 QAKAAGRNTQ-RFFDPDMQAQVTARSQLESDLRQGIARHELTVHLQPIVDGSTRLCGAEA 886 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNL 579 ++ G+++P F+PL + L QVL++ + L +VN+ Sbjct: 887 LVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNV 946 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q + ++ +PQ + LE+TE + E ++ + QL + G A+ Sbjct: 947 SARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFAL 1006 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL D++KID FV+D++T+ DA IVR+I LAK+ L VVAE V Sbjct: 1007 DDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGV 1066 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET Q + L G + QGYL GRP PL Sbjct: 1067 ETAGQLSFLKLHGCEGFQGYLFGRPVPLE 1095 Score = 55.0 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 26/288 (9%), Positives = 54/288 (18%), Gaps = 37/288 (12%) Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 G+ L F L + L + AI R L + Sbjct: 129 GVESVTLLLFALRASAAGPGMAWALVSALASLAIAWTATTDVPRDWLVAAGHAPLRIAAL 188 Query: 130 LVTPIGIKCSMYLVGS------------------FFDFPLKISTFFGDADAIFTVVDLLS 171 + + + G + F A Sbjct: 189 VSGTLMALSACLFYGMRQRRTDASVKRHGRRRTMAAAAVSMAAAQFLMAVPPERFYWARM 248 Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 L A+ + + I R + E R L SV ++ Sbjct: 249 LAHALHVAGYALLFQAVFIAGIRMPYARLREAESRLRESESRLQLLGRNLPDSVPYQMVR 308 Query: 232 TPY----------ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV-----STLCLLN 276 P + + G ++ T+ + Sbjct: 309 EPDGRRRFVHMGEALERLVGVSAADVMEDAQRLFDRIDPEDRAAQAEADEVSYRTMGVGE 368 Query: 277 YNQNFLQGVETEYSLAFILAV--LISFSVCLL--YMVRIYHRSEWLNR 320 + + + L S ++ ++ + Sbjct: 369 SVVRMRRMDGAPRWIRLSSSPRLLQGGSGRVIWDGVLTDVTQQREAQD 416 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 99/553 (17%), Positives = 200/553 (36%), Gaps = 31/553 (5%) Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFT--LGVGK 257 K A + ++ ++++ ++ I GY GK Sbjct: 515 RQQEEDLKLADIVYQNSSEAMMITDSKNEIIAINPALSEITGYSSSELIGKNPNVFSSGK 574 Query: 258 LRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYH 313 F L W + + EY ++ + + + + Sbjct: 575 QNPEFYQLMWEEIKLTGTWQGEIWNTKKNGKEYPEWLSISTIYDDYGNVFRRIALFSDIT 634 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + + QA D LT LPN EQ + + +DN + ++ Sbjct: 635 EKKKKDALILRQAKYDSLTNLPNRIMFIDRLEQEIKVSHRKNQKFALIFIDLDNFKKIND 694 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + + + + ++E + + +L G E ++LS ++ + + Sbjct: 695 TRGHVYGDALLIEAGKRITHCIREVDTVARLGGDEFTILLSDIADIHNVESICQKVLQTL 754 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S + + + + + LL + + Sbjct: 755 SEPFFISKMYTYISASLGVTIYPNDASSTLELLKNADQAMYLAKNLGRNR-FCYFTASMQ 813 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 + + L+N +R A+ L ++ QPI + + +L G+++P +F+ Sbjct: 814 EEALDHLELINDLRKAISLNQLEVFYQPIVELQTGVIRKAEALLRWKHPVRGMVSPAEFI 873 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRI--IRL 596 PL + L V + ++ + T + SVN P+ + ++ + Sbjct: 874 PLAEESGLIIEIGDWVFKQTVQHINTCKDQLGLDIQISVNKSPVQFRES--IDQLDWLAY 931 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + +++EITE +N S+M + + G +++DDFGTGY++ LK+ Sbjct: 932 LAENQLPGENIVIEITEGLLMNNNTSTMERLSKFRSAGIGLSMDDFGTGYSSLSYLKKFA 991 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F ++I + D ++ +I +A+ L V+AE +ET++Q LL G Y Sbjct: 992 LDYLKIDQSFTRNIAPGSEDMILSEAIITMAQKLGLKVIAEGIETKEQMELLIGAGCDYG 1051 Query: 717 QGYLIGRPQPLAD 729 QGY RP P D Sbjct: 1052 QGYYFSRPIPAED 1064 Score = 45.0 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 19/208 (9%), Positives = 50/208 (24%), Gaps = 14/208 (6%) Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 L+ IG +++L+ +F L +ST + L + Sbjct: 315 LIVSIGFSSALFLIVLYFIIGLHLSTIRSINSLTKVTGKFYGGDLDARVTLDTHDELNNI 374 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE------NDFIAGYL 243 + + ++ + R + + + + + Y + Sbjct: 375 ALGFNEMATSFQNLMIDKEEISSRLRAIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKE 434 Query: 244 VPVFF-----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI---L 295 + + LG + + A++ + + Y L L Sbjct: 435 EDMLNTPSSNLAELLGDEIAHHCLDSDKAALAQDSPHVSFETIPRSNAKPYILEITKVKL 494 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 V L+ + + Sbjct: 495 KNAQGEVVGLIGISKDITNKRQQEEDLK 522 >UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N514_9GAMM Length = 1084 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 94/554 (16%), Positives = 192/554 (34%), Gaps = 26/554 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIFT 252 +R + A + + L + + + + GY Sbjct: 517 ISTRKRTELQLQQTTTELNAILDNAMVGIAFLRDRQFVRVNEKFEELFGYTRDDIEGQSV 576 Query: 253 LGVGKLRYPFLNLTWAV--STLCLLNYNQNF--LQGVETEYSLAFILAVLISFS--VCLL 306 + +L NY ++ + + + S + Sbjct: 577 QCLYLNEDAYLQFGEEAYHQLTSGDNYEAQLEMVRKDGQVFWCGISGKAIDAGSPKAGTI 636 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRID 358 ++ A D LT LPN E + L +D Sbjct: 637 WLFEDITIQRQNEEHLTRLASIDGLTGLPNRAVFTDRVEHAIHKSMRNSGRLAVFFLDLD 696 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + + ++ G + + + ++E + + +L G E L+L + + + Sbjct: 697 HFKHINDSLGHKAGDILLTEVAGRIKACVREGDTVARLGGDEFTLLLEDVRSAEYVGKVA 756 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + NT +++ + + + L+ + Sbjct: 757 EKVIKSMTQPYQIENTEVNISPSIGISLYPADGRDVDMLVRNADAAMYHAKKVGRN-NFQ 815 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 ++ + K++ + +R ++Q DL L+ QP N + G + +L G Sbjct: 816 FYSAEMNAEAAKRLAMETALRRVVEQQDLHLHYQPQVNLQTGKLVGAEVLLRWQSEQWGN 875 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAG 591 ++P +F+P++ + + +L +VNL ++A Sbjct: 876 VSPAEFVPMLEDTGMITQVGEWILRQACATYLEWSERLPDNFMMAVNLSGRQFKGGSLAA 935 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I RL + + LEITE + E + + +L +AIDDFGTGY++ Sbjct: 936 FIRRLLDETGMPAAHLELEITESMLMDDTELATITLAELSAMNISLAIDDFGTGYSSLSY 995 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK+ +++KID FV+D+ ++ DA IV +I ++ + L VVAE VET +Q+ L + Sbjct: 996 LKQFPLNVLKIDSSFVRDVTSDKDDAAIVDAIMAMSNSLGLKVVAEGVETAEQRQYLLRH 1055 Query: 712 GVQYLQGYLIGRPQ 725 + QG+L + Sbjct: 1056 DCRLAQGFLFSKAV 1069 >UniRef50_C6X941 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X941_METSD Length = 738 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 100/569 (17%), Positives = 204/569 (35%), Gaps = 41/569 (7%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF------I 249 + A E L + + L + + GY + Sbjct: 146 KSIHARLEESETLYQYLIDSSPDIIYTLDDNGNFTFINNRVETLLGYSRETMLGKHYTLL 205 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL-QGVETEYSLAFILAVLISFSVCL--- 305 I + + F + + E + V+I+ Sbjct: 206 IHEEDYERAHHAFNERRTGNRAAKNVELRLRCQERRSERRQPEQNYITVVINAMGIYGTH 265 Query: 306 ----------LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + R + + QA D LT LPN + + Sbjct: 266 PEHGTPFNGTYGVARDITERKKAEQAITHQAYHDTLTDLPNRMLFKDRLTVAIHHAKRNK 325 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D ++++ G + ++ + L M+E + L ++ G E ++L Sbjct: 326 HKLAIMFLDLDRFKWVNDTLGHLYGDELLKQVAARLRNCMREQDTLARMGGDEFTMLLHE 385 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + R ++ + + + + ++++ L+ + Sbjct: 386 LNQPDDATVIAQKIFDELKRPFMLDDREIFISSSIGIAIYPDHGDSIENLIKRADIAMYH 445 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKE-GEGYDE 521 + ++ K++ L N +R A+++ ++LY QP + G + Sbjct: 446 VKWRGKN-GFQYYDPSMNSMFHKKLSLENELRRAIEKRQIVLYYQPKIHLDGHCVIGLEA 504 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLM 580 + + G+++P +F+PL + L +LE + ++N+ Sbjct: 505 LARWHHPELGLVSPLEFIPLAEETGLIHALGEMLLEEACVQMRQWQDAGLNNFSLAINIS 564 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P + + RI+ + + +S +EITE + ESS+ +++L G +IA+D Sbjct: 565 PQLVEEDAFVSRILTPIRHHQLSEDLFEIEITENLLMRDVESSISKLKELGSHGIKIALD 624 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGT Y++ L+R +KID FV DI + + +A I+ +I +A L ++AE VE Sbjct: 625 DFGTCYSSLAYLRRFPIHSVKIDKSFVSDISSTSENASIISAIAGIANGFKLDLIAEGVE 684 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T Q L LG +QG+L +P P + Sbjct: 685 TIPQMHTLQSLGCTKMQGFLFSKPLPAKE 713 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 113/618 (18%), Positives = 210/618 (33%), Gaps = 41/618 (6%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY--YLTRMIVSPHFAQILW 200 G ST G + + LL + + L +L R+ + Q Sbjct: 318 FGLASVDLPPGSTIVGRPPSFWMRHRLLITVLSGMAGLQLLAGWFLWRLSGTRRGTQKYL 377 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIAGYLVPVFFIIFTLG 254 A + + L+ L + + + G + + Sbjct: 378 HEKEAQFKTVIRATHDAVVVINERGLVTLFNPAAEELFGWSSAEMLGCNLDILMPEGYRD 437 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYH 313 + T S + + E+ + L+V +L ++R Sbjct: 438 QHRHDVASFFSTGEPSEAVGRSLELLAVHRSGKEFPIELSLSVGKYGHERFVLAILRDIS 497 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + R A D LT LPN E + + + +DNL ++ Sbjct: 498 SQRQVEREIKQLAYYDSLTGLPNRALFEDRFRRVLTTADRAGKMAALLFIGVDNLNSIND 557 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 +G ++ I + L+ + Q + + G + +++L G + + Sbjct: 558 THGHTYGDKLLKVIGQRLVAVAQNGATVVRWEGDKFVVLLPGLSDAETADTVARQILQSI 617 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + ++ + + + LL S + E ++ Sbjct: 618 AEPCEVDDQSFFVTASIGGAVYPQHGADGDKLLKNADMAMYASKELGRN-TYCTFTEEMN 676 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + ++ L + +R AL + + L QP + + G + +L + G+++P +F+ Sbjct: 677 RRVLERSGLEHNLRLALAREEFFLAYQPQVDQATGKVLGSEALLRWRHAEKGMISPGQFI 736 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L VL++ R +VNL Q + ++ ++ K Sbjct: 737 PLAEESGLILPIGHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQFQQPDFFDQVAQVLK 796 Query: 599 RYHISPQAVILEITEEQA--------FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + P+ ++A+ ++ + L G IAIDDFGTGY++ Sbjct: 797 DTELDPRY--------LELELTESLLMADADVAVETLRALRDLGVGIAIDDFGTGYSSLS 848 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK D IKI FV DI + DA IV ++ +A L +VAE VET+ Q L Sbjct: 849 YLKTFPIDRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQLEFLRA 908 Query: 711 LGVQYLQGYLIGRPQPLA 728 Q +QGY GRP P Sbjct: 909 RRCQVMQGYYFGRPMPAE 926 >UniRef50_B4W5F5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W5F5_9CYAN Length = 776 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 102/612 (16%), Positives = 196/612 (32%), Gaps = 62/612 (10%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLC 231 + L +V ++ E + ++ A + + Sbjct: 155 WFAATISPTLEDSVVWVARDITERKQAEQALKQAEAKYRSIFENALEGIFQSTADGHYIS 214 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL-----CLLNYNQNFLQGVE 286 + GY P ++ + Y S L + ++ + Sbjct: 215 ANPALARLYGYSSPDELMVRLTDIEHQLYVDPQRRAEFSRLLQENDAVADFESQVYRKDG 274 Query: 287 TEYSLAFILAVLISFSVC----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + +A + V + + +A D LT LPN Sbjct: 275 SVIWIAENARAVRDMMTGELLYYEGTVEDITEHKLAKDQLQTRAFYDTLTGLPNRALFMD 334 Query: 343 APEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + L +D + ++ G ++ + I R L ++ + + Sbjct: 335 RLSHTVERAKRHPTYRFALLFLDLDRFKVVNDSLGHLVGDQLLIGIARRLESCLRTEDTV 394 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDG---- 446 +L G E ++L E + + + + + + G Sbjct: 395 ARLGGDEFTILLEDIEDIHHATRVAERIQQELAAPFNLDGHEVFTGASVGIVLSREIRKE 454 Query: 447 ----NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 N + + LL ++ A + + + + L +R A++ Sbjct: 455 GDITNYDCPEDLLRDADTALYRAKALGRSR-YEIFDLTMHQNALSVLQLETELRRAVENQ 513 Query: 503 DLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + +Y QPI + + G++ +L G++ P +F+P+ + L +L Sbjct: 514 EFEIYYQPIVSLSTHQIAGFEALLRWHHPSRGLVYPGEFIPMAEETGLIIPMGWWMLRQA 573 Query: 560 LKWLATH----------PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 + L VNL LQ + + ++ H+ P + L Sbjct: 574 CRQLELWHDTVQESELNQELAHQLTIYVNLSSKQFLQPELLEHLDKILHETHLHPSHLKL 633 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE ++ E + +++L + IDDFGTGY++ L R D IKID + + Sbjct: 634 EITESCLLADPEIAEERLKELRDRQIGLCIDDFGTGYSSLSYLHRFPIDTIKIDQSLISN 693 Query: 670 IVTNTLD--------------AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 I + IVR+I LA + + V+AE VET++Q L L Y Sbjct: 694 ISIDVQGHCEAGMINRTKGLPLQIVRTIIMLADSLGMKVIAEGVETKEQLTQLRLLDCDY 753 Query: 716 LQGYLIGRPQPL 727 QGYL P Sbjct: 754 AQGYLFQAPLDA 765 Score = 47.7 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/174 (10%), Positives = 45/174 (25%), Gaps = 15/174 (8%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCTPY 234 ++ + + A++ R A ++ L + L + T Sbjct: 39 LVNLISTVAAQLGVAIERKQAEVALRSSEAELRALFAAMTDSIFVLDSQGCFLKIAPTNP 98 Query: 235 ENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + + + + + A++T LN + E A Sbjct: 99 DPRLLPENANEFVGKTLHQFFAPTQADQFLTYIQEAIATSSRLNIEYSLTVRD-REVWFA 157 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ-ALTDPLTLLPNFRALEQAPE 345 ++ + S ++++ R + + A E A E Sbjct: 158 ATISPTLEDS--VVWVARDITERKQAEQALKQAEAKY--------RSIFENALE 201 >UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Nostocaceae RepID=B2JAQ5_NOSP7 Length = 1043 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 111/561 (19%), Positives = 205/561 (36%), Gaps = 27/561 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 I A+ + G + W + + L + GY V FF Sbjct: 467 ITDRKLAEAALQESKQRLDGILCSLEDVIWSIS-ADTFETLYLNPAALKVYGYSVSEFFE 525 Query: 250 IFTLGVGKLRYPFLNLTWAVS----TLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 L + A ++ L ++ + S Sbjct: 526 NSNLWFEVIHPEDQQQVHAAIQPLFLTEKQELEYRIVRPDGQVRWLLNRSHLIYNASGLP 585 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFC 353 + + + L + A D LT LPN EQ + Sbjct: 586 IRIDGIATDITERKLLEEKLVHNAFYDALTGLPNRILFIDRLEQAIAQMKHNPDDLFAVL 645 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G ++ + ++ + L +Q ++ + +L G E ++LS +T Sbjct: 646 FLDLDRFKVVNDSLGHLVGDQLLVTLAQRLQQCLQPDDTVARLGGDEFTILLSHIQTIED 705 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + ++ + + M LL ++ Sbjct: 706 ATDIAKHIHQALKPPFNLCGYEVFMTASIGIALGTNKYVQPADLLRDADTALYRAKEQSQ 765 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + + + + + L +R A+++ +L ++ QPI + G++ ++ Sbjct: 766 AGHI-VFDTTMYDRAVELLQLETDLRWAVERQELCIFYQPIICIKTGKITGFEALVRWQH 824 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTL 584 + G+++P +F+P+ + L VL K L +VNL Sbjct: 825 PERGLISPTEFIPVAEETGLIIPIGQWVLTESCKQLRQWQLQFPAIKPLTLNVNLSGKQF 884 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q ++ +I ++ + +S + LEITE ++ + + ++QL FG ++ IDDFGT Sbjct: 885 SQPHLIEQISQILQDTGLSSSNLKLEITETAIIASPQKATSILKQLKAFGLQLCIDDFGT 944 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L D++KID FV I ++T IVR+I LA +SVVAE VET Q Sbjct: 945 GYSSLAYLHNFPIDVLKIDRSFVNRIDSDTEQFAIVRAIVTLADNLGMSVVAEGVETINQ 1004 Query: 705 QALLHKLGVQYLQGYLIGRPQ 725 A L L Q QGYL +P Sbjct: 1005 LAQLQLLQCQQAQGYLFSKPL 1025 Score = 46.1 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 13/132 (9%), Positives = 34/132 (25%), Gaps = 10/132 (7%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVP--VFFIIFTLG 254 + + +E++ + A + LL + + GY + + +F+ Sbjct: 347 QALEALGKQEEQYRRIVQTATEGIWLLDKDNCTTFVNQQMATMLGYTIEEMLGATLFSFM 406 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRI 311 + + ++ F ++ A L+ L MV Sbjct: 407 DSEGLEIANSCLSRRYQGIQEAHDFKFRCQDGSDLWAIISCAPLLDDQGNYAGALGMVTN 466 Query: 312 YHRSEWLNRRWH 323 + Sbjct: 467 ITDRKLAEAALQ 478 >UniRef50_UPI00016AFAA6 predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA6 Length = 709 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 114/572 (19%), Positives = 223/572 (38%), Gaps = 26/572 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + ++ AQ A E R L A+ ++L+ + D A Sbjct: 122 LAARVKTHLALRAAQRQLVLANARLASSEARYRRLFETASDGIILVDMAGSRITDVNASL 181 Query: 243 LVPVFFIIFTLGVGKLR--YPFLNLTWAVSTLCLLNYNQNFL-------QGVETEYSLAF 293 + + F + PF + S L + T + F Sbjct: 182 VEMLGFERDHFVGRPIGSVPPFEAVPECASLCATLAASGEIRCEHTSLATATGTLLDVEF 241 Query: 294 ILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + ++ ++ VR + R AL D LT LPN L++ Sbjct: 242 LASLYTVGGARIVQCNVRDITERKQAEARVRYMALHDALTGLPNRALLQEHLAQAIARAR 301 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + L +D + ++ G + + + L ++E + + +L G E ++ Sbjct: 302 REGGCVAALMLDLDRFKHVNDSLGHHIGDRLLEAASMRLRGCLREGDTVARLGGDEFVIG 361 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ + + + + SR N L +G R+ + E +Q LL Sbjct: 362 LADVDGDQGAGEVATRVLTTLSRPFFVENHELHVGCSIGISRYPADGEDVQTLLRAADTA 421 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 + A+ ++ +++ L IR A D+G+ +L+ QP + G Sbjct: 422 MYDAKANGRG-IYRFFTPELNAAAQQRLALARDIRYAFDRGEFVLHYQPQVCTHSGAITG 480 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSV 577 + +L + G+++P +F+P++ + L VL + + R +V Sbjct: 481 VEALLRWRHPEHGLISPLQFVPMLEELGLIVAVGQWVLRTACQQSVQWQSAGLPPVRMAV 540 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL L + +I + + ++ + + LE+TE A NA+ ++ + + + G + Sbjct: 541 NLSAYQLQRGDIVRTVDEALRETGLAAEWLELELTETMALYNAQEAIRIMREFKQLGVSL 600 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTG+++ L++ D IKID F++D+VT+ + +V+ I LA L +AE Sbjct: 601 SLDDFGTGWSSLSYLRQFPIDRIKIDRSFIRDVVTHPGASAVVQGIMTLANHLGLQCIAE 660 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET QQ L + +QG+L+ P + Sbjct: 661 GVETVQQFGFLQERACGEIQGFLVSPALPAHE 692 >UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89WT2_BRAJA Length = 833 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 127/769 (16%), Positives = 237/769 (30%), Gaps = 48/769 (6%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRG 63 I+ F + + + + S + +++ WR Sbjct: 53 AGAAIGYGIWATHFVAMLAYEPGVPTNYGLVLTVLSLAAAMILTSGGFGVAVNNSGQWRA 112 Query: 64 VVPVLC------GMFCTNLWNF----HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 M +W +++ V++ +VL A+ Sbjct: 113 AAGGGIIGAGIASMHYIGMWALEVPGRVTWSPGLVLISIGLGMVLGYAALAVALGHKDKW 172 Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 + + T +G + D TF A A + L F Sbjct: 173 GTFAAALLLTLAIVSHHFTAMGAVQIVPDPTLASDTLSLSPTFLAVAIAGVALSVLGMSF 232 Query: 174 TAVLIYNMLFYYLTR---MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 VL L +R +I A+ ++ R T ++ + Sbjct: 233 VGVLADRRLATRTSRFEQIISELSLARQQVEDSQQEIQEQKLRLDTAINNMVEALCMFDA 292 Query: 231 ---CTPYENDFIAGY-LVPVFFIIFTLGVGKLRYPFLNLT-----------WAVSTLCLL 275 + Y L P T +R+ + +S L L Sbjct: 293 EKRLVVCNERYARLYQLPPELLRTGTPHADIIRHRVVTGILKSDTSEGAAEQFLSKLAAL 352 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 ++ + E + + + A D LT LP Sbjct: 353 PFDAVSSRIDEFTDGRLICVTRQPMAGGGWVATHLDVTEQRRSEAKIAHMAQHDALTDLP 412 Query: 336 NFRALEQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L + E + L +D + ++ G +R++ L Sbjct: 413 NRVLLRERMEHAIAVTRNGGLDLAVLMLDLDRFKEVNDTLGHPTGDSLLRAVATRLRECT 472 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 E + +L G E ++ + + + + +G Sbjct: 473 TETALIARLGGDEFAVIDYVTNPAVEAAALAENIRKALCEPFDLGDHRVTVGTSIGIAIA 532 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + ++ + + A E + + L +R A+ Sbjct: 533 PRDGNDSDVIMKSADLALYSAKSGGRG-AFRFFEPELDELMHARRNLERDMRDAIVGRQF 591 Query: 505 LLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L+ QP + + G++ +L G++ P +F+PL + L VL + Sbjct: 592 ELHYQPFVSPATGKVNGFEALLRWHHPQQGLVMPSEFIPLAEETGLIVPLGEWVLRAACA 651 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 A P R +VNL P K + +I ++P + LE+TE ++E Sbjct: 652 EAAKWP---PHVRIAVNLSPAQFRSKELVPVVIGALASSGVAPHRLELEVTETVIMHDSE 708 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT-NTLDAMIV 680 + + QL + G RIA+DDFGTGY++ L++ D IKID FV ++ + + Sbjct: 709 AVFAVLGQLRELGVRIALDDFGTGYSSLSFLQKFPFDKIKIDRSFVNELSSARAEARHLA 768 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 R++ A + + AE VET++Q +L + G QGY RP P +D Sbjct: 769 RAVVRFAVSLGKTTTAEGVETKEQLDILCEEGCLETQGYYFSRPMPASD 817 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 129/699 (18%), Positives = 229/699 (32%), Gaps = 31/699 (4%) Query: 56 LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG 115 L G V + + F + R WR Sbjct: 154 LAQGGLGVVGRLPVFLNDAQGHKVFWGFTYVTLRFPDALASARLPLLTQRGYAYELWRTA 213 Query: 116 L-TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 T G++ + G + I+ + F L Sbjct: 214 PDTGERQSIEASGNGVLDAPVERTLELPNGQWTLSVAPINGWGQSDRLGFEATINFFL-- 271 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP- 233 L+ L + L M V ++ A L +++ +L L L Sbjct: 272 -SLLMAYLAWLLYEMRVRDQGLEVQVNERTAEILATQRQLQATLGAIPDPLLELGLDGRC 330 Query: 234 -----YENDFIAGYLVPVF-FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 D + + I L + L Q + Sbjct: 331 YNAHSSRTDSLPWPTEDLIGRTIMELLPPQACQIVLAALQEAKEKECSIGKQIKVPLDNG 390 Query: 288 EYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA- 343 + + + L L + R S+ R+ L A D LT LPN L Sbjct: 391 MHWFEMSVTRKSALPGEEPLFLVLCRDITESKQAERKIQLLAHFDSLTGLPNRVLLTDRC 450 Query: 344 -------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + L +D+ + ++ G + + ++ L ++E + + +L Sbjct: 451 NLALSAAQRNGTPLALLLLDLDHFKNVNDSLGHRVGDEVLIALAGRLKGAVREQDTVCRL 510 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +LVL G H+ +L L + F G+ Sbjct: 511 GGDEFILVLPETNAAG-AAHIAEMLLQSALVAFELEPHELTVTPSIGIALFPGDGSDFDT 569 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L ++ + ++ + + L N +R AL++ L L+ QP + Sbjct: 570 LSRCADAAMYRAKKDGRN-NYRFFTAEMQARSERTLTLENALRRALERNQLQLHYQPQIS 628 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 G + +L + G + P +F+P+ L VL + ++ L Sbjct: 629 LASGRVVGAEALLRWSHPELGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAG 688 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 SVNL + ++ + + + + LE+TE A ++ ++ + Sbjct: 689 MLPIALSVNLSSVQFRHADLPELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNN 748 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 LH+ G R++IDDFGTGY++ LK+ + IKID FV+DI ++ D IV +I +A + Sbjct: 749 LHERGVRMSIDDFGTGYSSLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATS 808 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +AE VET+ Q L G +QGY RP P+ Sbjct: 809 LGMQTIAEGVETEGQLEFLKAKGCTEVQGYYFSRPLPVE 847 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 98/452 (21%), Positives = 186/452 (41%), Gaps = 25/452 (5%) Query: 301 FSVCLLYMVRIYH----RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + L + + L + A D LT LPN R L Q Sbjct: 129 RAAELAIVNQDLTFQSKEKAKLAEELNDLAFYDTLTGLPNRRLLIDRLHHALASNVRQGC 188 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D+ + ++ G + + + L +++ + + +L G E +L+L Sbjct: 189 ESAVMFIDLDHFKDINDTLGHEVGDLLLIQTAQRLESCLRKGDTVARLGGDEFMLILENL 248 Query: 409 E-----TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + + + + + + + + FD T + L+ Q Sbjct: 249 DENPIEAATKAKAIADKILAELNKPYQLDMHKCHSTVSIGAVFFDHQGNTAEDLIKQADI 308 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEG 518 Q+ L + + ++ L N +R A+++ LY Q + G Sbjct: 309 AMYQAKQAGGNL-IRFFNPKMQESINARITLENELRIAIEKSQFHLYYQIQMDSDNRVLG 367 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFS 576 + ++ + G++ P F+P+ + L V+E+ + + + Sbjct: 368 AEALIRWTNPEHGLVLPATFIPIAEETGLILSIGKWVIETACAQIKVWQKKSQTRDLTLA 427 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ QK+ ++ +R+ I + LE+TE + E ++ ++ L+K G + Sbjct: 428 VNVSAKQFRQKDFVDQVQSAVQRHAIPGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQ 487 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++DDFGTGY++ + LKRL D KID FV+DI T+ D IV++I +A+ + V+A Sbjct: 488 FSLDDFGTGYSSLQYLKRLPLDQFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIA 547 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET++QQ LL G QGYL +P P+ Sbjct: 548 EGVETEEQQQLLLGKGCTLYQGYLFSKPIPID 579 >UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ25_9GAMM Length = 818 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 109/560 (19%), Positives = 199/560 (35%), Gaps = 25/560 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE-NDFIAGYLVPVFF 248 I A+ + +R A E ++ LL V + Sbjct: 248 ISDRMEAETIRKRLTATL---EATTDFVAIADLQGHLLYANAARRSVLGLAPEDKVGICT 304 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCL 305 + + + E ++ ++ Sbjct: 305 LSDGHTEWASAKLMSKAIPTAMQEDTWSGELALIDRDGLEIPVSEVIIAHRGPDGEVQFF 364 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + R + L +A D LT LPN L +Q + + Sbjct: 365 SAIARNISERKRLEEELAYRASHDALTCLPNRSLLLDRMQQALAYARRYNHRVGVLFVDL 424 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G +R++ + ++ ++ + + G E +++ + L + Sbjct: 425 DRFKRINDTLGHHAGDTILRTVAERICQGVRRSDTVSRHGGDEFVVIAAQVFDSNDLASI 484 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V+ + S I N + + + + E LL Q+ + Sbjct: 485 VSKIRKTVSEPIKVKNRQVVLTCSIGIALYPFDGEDTDTLLKNADTAMYQAKENGRND-F 543 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY----DEILARLKYDG 530 + ++ Q+ + + L +R A+ G+ +L+ QP + + G + ++ + Sbjct: 544 QYYTKEMNAQSHEMLNLEEELRRAVKAGEFVLHYQPQVDLQ-TGALSRLEALIRWQHPER 602 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNI 589 G++ P F+P++ + L V+ ++ A + +VNL NI Sbjct: 603 GMLAPGTFIPVLEETGLIEPVGEWVVREAVRQCAVWKEMELPPVTVAVNLSVRQFANLNI 662 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 A I R+ I P + LEITE ++A + L + G R+A+DDFGTGY Sbjct: 663 AEAIERIVTEAGIPPACLELEITESVLMADAFDGAEALRALSQRGLRVAVDDFGTGYCAL 722 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+RL + +K+D FV D+ + A IV +I L VVAE VET Q LH Sbjct: 723 HYLRRLPVNTLKVDHSFVSDLEGDPTTAAIVSAIITLGHDLGCKVVAEGVETLAQCNHLH 782 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 +LG QGYL RP P + Sbjct: 783 RLGCDLAQGYLYYRPCPPEE 802 Score = 43.8 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 4/144 (2%), Positives = 23/144 (15%), Gaps = 3/144 (2%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 R ++ S E+ A + ++ + Sbjct: 112 LVPAVRRELREAKLRRERVRAQKQLQKLSRAIEQTAECVFITNPDGIIEYVNPAFERLTG 171 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + ++ + + + + ++ + Sbjct: 172 FTSEEAMRNSPRILRSGQHSASFYRDMWRTLKDGGVFRGMVINRRKNGALFYEEKVITPI 231 Query: 299 ISF---SVCLLYMVRIYHRSEWLN 319 + + Sbjct: 232 KDSNGVITHFVSTGQNISDRMEAE 255 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 653 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 90/431 (20%), Positives = 165/431 (38%), Gaps = 16/431 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + R A D LT L N AL+ + + + +D + ++ Sbjct: 659 QRKQAERSLRFMASHDGLTGLFNRAALQHELARAIKRSNRHQKQFAVIFVDLDRFKHIND 718 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + I+ L L++E + + + G E +L+L + + + + Sbjct: 719 TLGHGVGDEMIKICGERLTALLREADVVARFGGDEFVLLLENLSSANDAAGLAEKVLACC 778 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 L + + N + LL ++ ++ Sbjct: 779 AEPFFLAGRELHVSASVGVSIYPDNGADAEALLKNADTAMYRAKERGRN-TFRFYAAKMN 837 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFL 539 Q T+Q++L + +R AL++G+L ++ QP + G + ++ G++ P +F+ Sbjct: 838 AQNTEQLMLESALRHALERGELEMHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFI 897 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L LE + SVNL P + + I + + Sbjct: 898 PIAEELGLIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQFESRTLIADIQAVLE 957 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + P + LEITE +N E + + + G +AIDDFGTGY++ LK Sbjct: 958 ASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLS 1017 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ D+ + ++ I LA + VVAE +ET Q L G QG Sbjct: 1018 TVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQG 1077 Query: 719 YLIGRPQPLAD 729 Y + +P P + Sbjct: 1078 YWLCKPVPADE 1088 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 653 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 98/544 (18%), Positives = 189/544 (34%), Gaps = 27/544 (4%) Query: 208 LGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLR 259 + A + + L I GY Sbjct: 186 EASLGLYGKVFESTAEGIAITDSRMRFLQVNEAYCRITGYSDGELLGRTPRMLKSGHHDA 245 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSE 316 + +++ + L ++V+ + +V + Sbjct: 246 AFYADISKTLEVRGHWRGEILDRTRDGRVIPLLQTISVVRDTQGAVSHYITIVTDISSIK 305 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYG 368 R A DPLT LPN E + +D + ++ G Sbjct: 306 ETQSRLDFLAHHDPLTELPNRLLFTARLEHAIDWAVRNQAHFGLLFIDLDRFKTINDSLG 365 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + + + R L L+++++ + +L G E ++++ G G + + L + Sbjct: 366 HQLGDRLLVQVARRLRGLVRKSDTIARLGGDEFVVLVEGIHNAGEAELLAEKLVHAMRQP 425 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 T L +G + + E LL + + ++ Sbjct: 426 FFLEETELHIGCSIGITLYPEDGEDPVTLLKNADAAMYRVKDFGRD-GFCKFSQDLAEAV 484 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ L +R AL + L ++ QP+ + + + + G + P F+ L Sbjct: 485 DERLALETALRQALRENQLQVHYQPVIDLAQGRMVAVEALARWRHAERGEIAPCSFIRLA 544 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L + + + S+N + L + + Sbjct: 545 EETKLILPLGGWMARTAIGQFRLWRERGMELDYVSINTSGIELFDPGFVDGLFEALDEHG 604 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + + +E+TE + E+ + +L + G RIAIDDFGTGY++ LK+L D++K Sbjct: 605 LEGRHLQIELTENVLMQDYEACRRVLLRLRQQGVRIAIDDFGTGYSSLAYLKQLPIDMLK 664 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+KD+ + D IV +I +A L+ VAE VET++Q+ L +G + LQGY Sbjct: 665 IDRSFIKDVPGDPGDCAIVETIIAMAHRLGLATVAEGVETEEQEDYLLAIGCERLQGYRY 724 Query: 722 GRPQ 725 RP Sbjct: 725 ARPL 728 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 653 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 107/551 (19%), Positives = 199/551 (36%), Gaps = 24/551 (4%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 A E+ + ++++ + A + Sbjct: 20 SRAALLRAYEQSQDAILVTDRDNLIVAANGAFCQLSGYASDELLGKDPRVLASDNSTAEH 79 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWL 318 + ++ A++T Y+ +AVL + S+ Sbjct: 80 YASIWNALATKDFWEGEIWDKNKNGERYNRWLKIAVLRDAEGQIENHVANFSEMEASKEY 139 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 R A DPLT LPN A E + + +DN + ++ G Sbjct: 140 ADRLAYLAYHDPLTNLPNRLAFESQLAQALRGCERDNRQLALMLIDLDNFKNINDTLGHH 199 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIH 427 + ++ + L ++ ++ + ++ G E ++VL E+ + N + + Sbjct: 200 VGDELLQKVALRLRESVRSSDLVARIGGDEFVIVLPEIESPLTAARVANKVQQNMADSYR 259 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + L F + LL + ++ + Sbjct: 260 IADHALYATPSIGISLFPIDGSDANTLLRNADTAMYHAKDAGRN-NHQFYTARMNEAAGE 318 Query: 488 QVLLLNTIRTALD-----QGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 ++ + N +R A+ + L+ QP + G + +L G ++P +F+ Sbjct: 319 RLHMENELRQAISAISPGDSEFSLHFQPQVQTATGQVFGLEALLRWNNPIFGQVSPMRFI 378 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + L V+ + + R ++N+ L +N+ + Sbjct: 379 AIAEETGLIQPLGDWVIWETCRLIRQMKQHGIEDIRIAINISAQQLRHENLLLLVRGALS 438 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 Y + P+ + LEITE A N E+++ ++QL G +AIDDFGTGY++ LK L Sbjct: 439 CYDLRPEDIELEITESTAMQNPETTLSILDQLAAMGIVLAIDDFGTGYSSLAYLKHLPIQ 498 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +K+D FVKDI + DA I + L + L +VAE VET+ Q+A L LG LQG Sbjct: 499 RLKLDRSFVKDIEIDANDAAICTATIALGHSLGLELVAEGVETEAQRAFLASLGCDTLQG 558 Query: 719 YLIGRPQPLAD 729 YL +P P + Sbjct: 559 YLYSKPMPFEE 569 >UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9A3_KANKD Length = 1515 Score = 653 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 107/725 (14%), Positives = 232/725 (32%), Gaps = 32/725 (4%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVL-CGMFCTNLWNFHLSFLQ 85 L + + S L L +++ F + + M L Sbjct: 775 LQIHVKTSGWLTPSAFTLYGFILGLII---LAFSYLIWARMRERRMAALQLTQSEERLKL 831 Query: 86 TAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGS 145 + G + + L + + + + L Sbjct: 832 SLWGSGDELWDWQVQSGALHLSNEWPYDFPRDGIRSGYSMANSNIHPNDLPYVRQSLNAH 891 Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 D + + + +D + + L ++ RM + + Sbjct: 892 LADKSMHYESTYRISDEHGGWIWV--LDRGKVVSRDENQKPLRMAGTLKN-ITELKNTEQ 948 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN- 264 K +S + F ++ L + + Sbjct: 949 QLSMIVKSFDNISDGVWILDENFHYIAV-NKAFTKITGFDESEVLGKLMKVSSLHQITDD 1007 Query: 265 ----LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEW 317 L ++ + Y + + V+ + + + + Sbjct: 1008 EFYDLRNELTEKGFWYGELVAKRKDGDTYPIEINIDVVRDNDGEIINYVGVFSDITFRKQ 1067 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLM 370 R A D LT L N + E + + +DN + ++ G Sbjct: 1068 AERELRRLATVDQLTDLKNRTSFRTLFEHLIEDSGRGDQHALLFIDLDNFKRINDSLGHG 1127 Query: 371 MRVHCIRSICRTLLPLMQE-NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQI 426 + + + + L ++ + N + +L G E ++L +T + + + ++ + Sbjct: 1128 IGDELLIYVAKILQEIVSDQNGVVARLGGDEFTVLLQEVDTWNKPAKIAQAILDEFAKSL 1187 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + + + N + + LL + ++ Q Sbjct: 1188 PLSTAEVVVSPSIGIVMYPENGTSAEELLKNADTAMYYAKKKGKN-TYQFYTRQMNEQAK 1246 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++ L + +R A+++ + +++ QP + + G + ++ G++ P +F+PL Sbjct: 1247 LRITLESELRQAIEKDEFVMFYQPKVSLQTGKITGMEALVRWRNPRRGLVLPGEFIPLAE 1306 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + +V+E + + +VNL + +N+ + I Sbjct: 1307 EAGFIIPISQRVIEKTCLQIRDWQNRGIFHGKVAVNLSAVQFYHENLWETVKNALHLAKI 1366 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 P A+ EITE + S+ + L + G +A+DDFG GY++ LK D +KI Sbjct: 1367 EPDALEFEITEGMVMEDLAQSLQQMRTLREMGISLALDDFGVGYSSLGNLKDFPIDTLKI 1426 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV D+ + D +V SI LA + VVAE VE + Q L ++G + +QG++ Sbjct: 1427 DRTFVWDLEDSDRDRNLVASIVTLAHNLDIKVVAEGVENRNQVDALREMGCEEIQGFIFS 1486 Query: 723 RPQPL 727 RP P Sbjct: 1487 RPVPP 1491 >UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DNW4_DESVM Length = 1076 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 106/574 (18%), Positives = 195/574 (33%), Gaps = 31/574 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIA 240 L+R R E R + A + L I Sbjct: 481 LSRANAQLMLENAERRTVEQALRRAEARFRGIFEHALEGIFQSTPEGRFLSVNPAMARIL 540 Query: 241 GY--LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN---YNQNFLQGVETEYSLAFIL 295 GY + + + ++G G P + + + L+ Sbjct: 541 GYEGVQELLEGVESIGDGVYADPARRDEFVARMEEHGQVNAFEFRGRRKGGDLIWLSVNA 600 Query: 296 AVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + + R QA DPLT LPN Sbjct: 601 RRVPGADGATMYYEGFLEDVTMGHESRERLEHQAFHDPLTGLPNRVLFHDRLQMALKRAA 660 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +D + ++ G + ++ + L +++ + + + G E + Sbjct: 661 RRRNYTFAMLYLDLDRFKVINDSLGHDVGDALLKVVSAKLRECVRDVDTVARFGGDEFGV 720 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L T G + + + + + T + L+ Sbjct: 721 LLEETPTRGTAVRVARRIRAHLAEPVRIGPHEVFTTASIGIVLRTDQYSTPEELVRDADT 780 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 ++ + + + + + + +R A+++ ++ L+ QP+ + Sbjct: 781 AMYRAKEQGQSR-FKVFNKRMREEALRLLTIETDLRRAVERQEMRLHYQPVVALEDGGLH 839 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR--F 575 G + +L + +GG ++P +F+P+ L LE + L P Sbjct: 840 GVEALLRWTRTEGGDISPAEFVPVAEDTGLITSIGAFALEEVCLQLRRWNEAGLPPPGVV 899 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 VN+ +Q + + L +R P+++ E+TE + ++ + QL G Sbjct: 900 HVNISGRQFMQPGLPHAVEMLLERTGTDPRSLRFEVTESVLMRHGSQAITVMAQLRDLGI 959 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 R+ +DDFGTGY++ LKRL D IKID FV + + IVRSI L L +V Sbjct: 960 RLCLDDFGTGYSSLGYLKRLPVDSIKIDRSFVAGLEHDRDGQAIVRSIVSLGLHLGLEIV 1019 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VET Q +L LG +Y QG+L P D Sbjct: 1020 AEGVETPTQAEMLASLGCRYAQGFLYAPPVSADD 1053 Score = 42.3 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 27/125 (21%), Gaps = 6/125 (4%) Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 + E ++L L + G + L + P L Sbjct: 341 ETEDGEDIVPEAVVRDNAALLAFLDGADVPGQPMTGVSCTLPGPSGALAARPVTGPDQGL 400 Query: 266 TW-----AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSEWLN 319 + + L + ++ T + L + +VR Sbjct: 401 PQGAPCPSGTGTALRSGEVAAVRRDGTPCWVELSLVRRQVMGTTYGICLVRDVTERRRAQ 460 Query: 320 RRWHL 324 H Sbjct: 461 EALHR 465 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 107/584 (18%), Positives = 194/584 (33%), Gaps = 57/584 (9%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN-----DFIAGYL 243 ++ R+ E R + + + + + + GY Sbjct: 341 VLRGLTLDVSPQRQAALALKDSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYS 400 Query: 244 VP--VFFIIFTLGVGKLRYPFLNLTWAVSTL--CLLNYNQNFLQGVETEYSLAFILAVLI 299 + + + + LT + L L ++ + Sbjct: 401 IAESLGRPVSEFVSAEDSPLLEALTNQLLHGNKSQLRDELRLLTRAGEPRWVSVFVRSSQ 460 Query: 300 SFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEA 348 ++ + A D LT LPN L Sbjct: 461 DAEGRVIATFGTLTDITERKRAEEEIRRLAFYDSLTELPNRSLLYDRLRLAMASAARSRH 520 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +DN + ++ G + +R + + ++E + L +L G E +++L+ Sbjct: 521 HGAILFLDLDNFKDINDTLGHDVGDELLRQVASRMQGTIRETDTLARLGGDEFVIILNDL 580 Query: 409 ETEGRLQHMVNI---------LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + Q V L + F + + LL Q Sbjct: 581 -HPEQAQAAVEAETLGSKLLHLLAEPFRLGEHERHCTPSIGATLFGDGEVNVDELLKQAD 639 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGE 517 ++ L E + + L R AL + L L+ QP + Sbjct: 640 LAMYRAKDSGRN-TLCFFEPEMHQVVKARAALEADFRKALREDQLHLHYQPHVDDQGHIL 698 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-- 575 G + +L + G++ P +F+ + Q L + VL++ + LA + + R Sbjct: 699 GAEALLRWSHPERGMVPPMEFIAVAEQTGLIIKLGRWVLQTACQQLALWHRESQWMRINM 758 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS-----------NAESSM 624 +VN+ + + + + Q + E+ + Sbjct: 759 AVNVSAKQFRHPDFVREVAEILQSTGAPAQH-----------LVLELTESLLLEDTETVI 807 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L + G A+DDFGTGY++ LKRL ++KID FV+DI+ + DA I I Sbjct: 808 TRMNALRELGVGFALDDFGTGYSSLSYLKRLPLSLLKIDQSFVRDILVDANDAAIAEMII 867 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LAK L V+AE VET +Q+ L ++G QGYL GRP P+ Sbjct: 868 TLAKTLGLEVIAEGVETPEQRDFLLEMGCHQFQGYLFGRPGPVD 911 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 100/539 (18%), Positives = 213/539 (39%), Gaps = 27/539 (5%) Query: 216 TLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTW 267 T+ A +++ +L + + GY R + N+ Sbjct: 43 TIIQEADEGIIVTDSEGHILLANPAFETVTGYTQEEVLGKKPNILRSGLHDRKFYENMWE 102 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + + + + + + + + + + Sbjct: 103 TIRDHGVWKGEIWNKRKNGELFVEWLTIKAVYDVAGNPTHYVAIFSDVTQHKRTMEQLAR 162 Query: 325 QALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 + D LT +PN + + + + L +D ++++ G + Sbjct: 163 LSNYDLLTNVPNRQLFTKRLQHLLDTARRYNQQLAILFLDLDRFKYINDELGHYSGDILL 222 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGL 433 + + L L++ + L ++ G E +++L + + + ++ + Sbjct: 223 QKVANRLKKLLRTKDTLARIGGDEFVVILPKLKDIQEAVSIAEQIIESLQAPFLLHHKDI 282 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + + + + LL + +++ + + Q+ + V L N Sbjct: 283 YISASIGISVYPNDGDDGEMLLRRADRAMQKAKESGRNR-FELYTAKLDYQS-EVVTLEN 340 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R A+++ +L + QPI N K+ E + ++ + + G ++P +F+PL + L Sbjct: 341 YLRKAIERNELFVCYQPIVNIKTKKIEALEALMRWKQPNIGFVSPAQFIPLAEETGLIVP 400 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 + E + + +N+ + Q + ++ + K++ + P+ LE Sbjct: 401 MTKWLFEQACVHIKAIHQFAPHVKIGINISAVHFQQDDFVQQLSTIVKKHDVHPRFFKLE 460 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE NAE S+ + QL + GF++AIDDFGTG+++ L R DI+KID F++ + Sbjct: 461 LTESTIMPNAEESVQKLVQLKQCGFKLAIDDFGTGFSSLSYLHRFPIDILKIDQSFIRRL 520 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + DA IV +I +A LSVVAE VET+QQ L+K QGY I +P P+ + Sbjct: 521 SLYSDDATIVSTIIMMAHHLHLSVVAEGVETEQQYEFLNKQQCDMAQGYYIAKPMPIDE 579 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 106/560 (18%), Positives = 193/560 (34%), Gaps = 22/560 (3%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R I A+ R+ + +S ++ + A V Sbjct: 244 RDITERRAAEERLRQAATVFDNTVEG---ISITDRDGIIQSVNPAFSRITGYAEAEVIGC 300 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL---AVLISFSVC 304 + + ++ + Y + Sbjct: 301 HTRILQSGRHGADYYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSN 360 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 + + + + + A DPLT LPN L + L Sbjct: 361 YVAVFSDISQIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLD 420 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G ++ I L ++ + + G E +VL + Sbjct: 421 LDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSE 480 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L + + + G + F + + L+ +S A Sbjct: 481 VAEHLIAEIARPLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSKALGRN-T 539 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDG 530 E ++ +++ L + +R AL+QG L+ QP + G + +L + Sbjct: 540 FSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGAEALLRWRDPER 599 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNI 589 G+++P +F+PL + L L VLE + R +VN+ + + Sbjct: 600 GLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNVAAPQIERGGF 659 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + R+ + P A+ +EITE +AE++ + L G +AIDDFGTGY++ Sbjct: 660 DQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVAIDDFGTGYSSL 719 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK L +KID FV+D+ + + I R+I + ++ VVAE VE Q A L Sbjct: 720 AYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGVEEPAQAAFLV 779 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 G QGYL +P P A+ Sbjct: 780 SEGCTLAQGYLFAKPMPGAE 799 Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 23/121 (19%), Gaps = 4/121 (3%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 E R + A L D G P + + + Sbjct: 145 LKDGEGRWLVTNGAAQALFGLAERDWFGRTDLELGSEDPARAEVHAVCARNDELVWQQGG 204 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + L T L + ++ + R R A Sbjct: 205 MRQMLEIVEDGQGRRLVFEATRIPLFDSV----GQRKGIVVVGRDITERRAAEERLRQAA 260 Query: 327 L 327 Sbjct: 261 T 261 >UniRef50_A6LW88 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Clostridiales RepID=A6LW88_CLOB8 Length = 981 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 101/556 (18%), Positives = 212/556 (38%), Gaps = 31/556 (5%) Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLVPVFFIIFTL 253 +++ E++ A S+ + + I GY + + Sbjct: 417 ELQQNEEALRVSEEKYKLALECANDSIWEWNLVTDTFFASDKLIDITGYKLDEINNLRNF 476 Query: 254 GVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL- 306 + L+ + + + + L + ++ Sbjct: 477 VYENVHSDDLDKVKKDFKNHINQLTDVYSSEFRIRTKSSSYVWILSCGKALRNSEGKVIK 536 Query: 307 --YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLR 356 +R + R A D LT LPN ++ S + Sbjct: 537 ITGSIRDISERKISEDRIKFMAFYDSLTKLPNRTLFMNRLNEQLQLSNYANKQGIVFFID 596 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +DN + ++ G + S+ + L++E + + +L G E ++L E +Q Sbjct: 597 LDNFKNINDTMGHEYGDKLLISLAKQFENLIEEKDTISRLGGDEF-ILLHPDSKEDEIQT 655 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 N L + +N + + + + +L ++ Sbjct: 656 YANKLLGLFDKVFKIDNKHMYITASVGIALYPKDGRDSSTILRNADAAMYRAKELGKNR- 714 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDG 530 + + ++ + +RTA+D +L++ QP + + G++ +L + Sbjct: 715 FSLFDPEMYLSLERKTSIERILRTAVDNNELIINYQPQYDLQANKIFGFEALLRLNSREL 774 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNI 589 G ++P +F+P+ + + L VL+ + A SVN+ + L + N Sbjct: 775 GFISPAEFIPIAEECGYITQLTLWVLKESCRQSAKWFEAGYKFNSISVNISSVDLQETNF 834 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + + + ++P + LEITE + +SS+ +++L G RIA+DDFGTGY++ Sbjct: 835 LDNVKEIIESSSVNPNMIELEITETVLMKSFDSSIGILKKLMDMGIRIALDDFGTGYSSL 894 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+R+ + +KID F+ +I +N + I+++I +A + L V+AE VET+ Q +L Sbjct: 895 SYLRRIPINTLKIDKSFIDNISSNKKEEAIIKNIIQMAHSMELKVIAEGVETEGQLLILE 954 Query: 710 KLGVQYLQGYLIGRPQ 725 ++ Y+QGY +P Sbjct: 955 RMKCDYIQGYYFSKPL 970 >UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BB47_9BACI Length = 1106 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 97/562 (17%), Positives = 209/562 (37%), Gaps = 22/562 (3%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 ++R + + + + W + +L+C+ I GY Sbjct: 384 GISRDVTEQREIEDRLAENTEQFKSFYNNSDVGVWSLDPAGKKVLICSN-AILAIYGYTK 442 Query: 245 PVFFIIFTLGVGKLRYPFLNLT----WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + + + +S ++ + ++ L + Sbjct: 443 KELYRDPRIWNRSIHPDDVQEVINNQNKISEGNIIRQQYRIITRDGKLKWVSDHLIPIYD 502 Query: 301 FSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------QEAGKS 351 L+ +V + + A D +T LPN R +Q + Sbjct: 503 EKGRLIRLDGIVADITAQKQAEAQMEFLAYHDYMTGLPNRRLFDQTLNGLFEGKNPEKFA 562 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + ++ + +++ + ++ G E ++ E+ Sbjct: 563 IMYLDLDRFKHINDTLGHPIGDQVLKEAADRITASIRKGDFASRMGGDEFAIIARNVESI 622 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + L + + N T + L + Sbjct: 623 EDASRLAAKITGTIQKPYEIEGYELFITASIGISLYPNNGSTPEELARNADAALYHAKQM 682 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 + ++ ++ K+ L +R AL + QP + G + +L Sbjct: 683 GK-SSHQVYNASMNIESFKKYCLERDMRNALKDDQFYVEFQPKIEPRTHKLAGAEALLRW 741 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 D GI++P +F+P+ + L V+E+++ + S+N+ Sbjct: 742 NHPDWGIVSPMEFIPVAEESGLIVEIGDWVIENVIAKMEEWQKGGLSLVPISINVSGQRF 801 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + N+A I L +++ ISP+ + LE+TE ++ + +E+L + ++++DDFGT Sbjct: 802 YKNNLAEMIGDLCQKHGISPKLLELELTESSLIHYSDQVLQELEKLGQLKIKLSLDDFGT 861 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 G+++ L++ + + +KID F K+I++N DA I S+ D+A ++ VVAE VE +Q Sbjct: 862 GFSSLTHLRKFRFNTLKIDKSFTKNIISNLEDATITSSLIDMAHGLNMKVVAEGVEEFEQ 921 Query: 705 QALLHKLGVQYLQGYLIGRPQP 726 L K G +QG+L RP Sbjct: 922 LDFLKKKGCDEIQGFLFSRPVS 943 Score = 44.2 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 11/140 (7%), Positives = 25/140 (17%), Gaps = 13/140 (9%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---CTPYENDF--IAGYLVPVFFIIF 251 E+R A + + G F F Sbjct: 261 ITELAEKERKLQKAEERLNLAQKTANFGYWDYYFKEDSAYWSEHMYEMFGVSKDEFIPSF 320 Query: 252 TL-----GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--- 303 L N ++ + ++ L +++ Sbjct: 321 DYYKDFIHPEDLAPFLKNYHASLEEKTPADLEYRIIRKDGQVRRLHHQSTLILDGDGCPE 380 Query: 304 CLLYMVRIYHRSEWLNRRWH 323 + + R + R Sbjct: 381 RAVGISRDVTEQREIEDRLA 400 >UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LR02_DESBD Length = 1158 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 115/562 (20%), Positives = 206/562 (36%), Gaps = 38/562 (6%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 ++ ++ L + +LLL D + P F +F Sbjct: 589 SKRKKAERRLAIQKGLFQQLFDNSPQGILLLG------KDGAPMDINPSFTSLFGYARSD 642 Query: 258 LRYPFLNLTWAVSTLCLLNY------------NQNFLQGVETEYSLAFILAV--LISFSV 303 L F L S + ++ + L Sbjct: 643 LHALFEMLLHPDSLDESYAFVSTVLSGTSVSTETQRRTKDGRIIPVSMLGYPYVLDGTIS 702 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCC 354 ++ + + QAL D LT LPN + + Sbjct: 703 GAFFIFSDISERKNYEAQLTRQALRDNLTGLPNRVLFMDRLNRAMTRQQRNGEYRFAVLM 762 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D+ + ++ G H ++ + L ++ + + ++ G E ++L + Sbjct: 763 IDLDSFKRVNDTLGHQAGDHLLQEVAARLTHCLRTMDTVARMGGDEFAVLLEDFQNNHEA 822 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + L + + + + + + LL +S Sbjct: 823 IGITRRLLDTIRQPLKIQDRDVLVSASVGVVLQTARYTSPNDLLRDADISMYRSKELGKN 882 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 + + Q + V L N +R AL + + L+ QPI + G++ ++ Sbjct: 883 Q-FKVFSKSMYEQVVQTVQLENDLRQALVEDEFELFFQPIYALSGQKLRGFEALIRWNHP 941 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQ 586 G + P +F+P+ + L V+ + LA S+NL P LLQ Sbjct: 942 QRGHLPPGEFIPVAEETGLVTEIGKWVMRRGCRVLAGWQSQFPGLDISLSLNLSPKDLLQ 1001 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ + L + + + LEITE N E + +E+L K GF+IA+DDFGTGY Sbjct: 1002 ASLVPVLTELLHETGLDARHLKLEITETAVMDNPEQATSRLERLQKMGFQIAMDDFGTGY 1061 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+RL DI+KID FV+ ++ N + I+++I L K L +VAE VET+QQ Sbjct: 1062 SSLSYLQRLPIDILKIDRSFVQTMLENPNNLEIIKAIIGLGKILDLRIVAEGVETRQQLE 1121 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L +LG QG+L+GRP Sbjct: 1122 TLQELGCDLAQGFLLGRPMSKE 1143 Score = 49.2 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/151 (11%), Positives = 37/151 (24%), Gaps = 12/151 (7%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFI 239 ++ + I EK+ + A + + LL I Sbjct: 449 HVLASVADHLALAISRNATEKALSQSEKKHRAIFENATEGIFQISLDHDLLSANPAMASI 508 Query: 240 AGY----LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 GY + F L+ A+ N+ + + ++ + Sbjct: 509 FGYDSLDSLMAGAKGFLQRAISSSDRVRLLSQALKLGTAQNFELDAFMAGGKKTWISINM 568 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWH 323 + L VR + + RR Sbjct: 569 RTVKRSDGSISHLEGSVRDVSKRKKAERRLA 599 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 107/577 (18%), Positives = 206/577 (35%), Gaps = 30/577 (5%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 Y R+ ++ +R +++ L V + L N + Sbjct: 495 GRQATYRGRRVRITAMRDVTERKRAERELREAQEQYRRLVEQLPAVVYIDRLDETSSNVY 554 Query: 239 IAGYLVPVF------FIIFTLGVGKLRYP------FLNLTWAVSTLCLLNYNQNFLQGVE 286 + +F + ++ +P A + L + Sbjct: 555 SSPQTEKIFGYSPQEWASDPEMFPRVLHPADRESVLAAHARANARGEPLELEYRLIARDG 614 Query: 287 TEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + VL ++ + L R A DPLT LPN Sbjct: 615 RVVWVRDSSIVLRDAEGNPRWRQGLMVDITEQKNLEARLVHLAFHDPLTGLPNRALFMDR 674 Query: 344 PEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 E + + +DN +F++ G + + R L + + + + Sbjct: 675 LEHALARAGRSGDVLAVLFIDLDNFKFVNDSLGHEAGDRLLALVARRLSGATRPGDTVAR 734 Query: 396 LPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E ++L G G + + L + +++ Sbjct: 735 LGGDEFTVLLEGIADGGEAARVAGRVAEVLREPFRVAGRELFVSASVGISVSTAGSGSVE 794 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ ++ + +S ++ L N +R A+ + +L LY QP+ Sbjct: 795 ELMRGADLAMYEAKREGKDR-YRVFDFGMSRTAHDRLRLENDLRRAVGRDELRLYYQPVV 853 Query: 513 ---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + ++ +L GI+ PD+F+PL + + +VLE A Sbjct: 854 RLGDGRVVAFEALLRWEHPRRGILLPDRFVPLAEETGMIVGIGRRVLELACSRAAGWRRQ 913 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + SVN+ L++ + + R+ +R + P+ ++LE+TE A + +++ Sbjct: 914 EPSLAVSVNISARQLVRPDFVEEVGRILQRTGLEPEGLVLEVTESAAMDEPGEAARALQR 973 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G R+A+DDFGTGY++ L+RL +KID FV+ + ++ ++V + L++ Sbjct: 974 LRERGVRLALDDFGTGYSSLSYLRRLPVCFLKIDRSFVEGLGGDSGSGVLVGGVIALSRE 1033 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 VAE +ET Q L +LG + QGY P P Sbjct: 1034 LGFEPVAEGIETPGQLERLLELGCELGQGYYFASPMP 1070 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 107/632 (16%), Positives = 214/632 (33%), Gaps = 39/632 (6%) Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 L +P+ + + + + A + L+ L++ L Y Sbjct: 11 SLRSPLARAGLLSSLVPWGQALGADLSGQIQGTADVWLWPLILGGFLALLFASLGIYNRA 70 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + R + + ++ + + + Sbjct: 71 LRRQVAQQTRALREANTTLRSERDFSQSIIQASP-----AFFVAIDTRHRVRMMNPAMLR 125 Query: 249 IIFTLGVGKLRYPFLNLT--------------WAVSTLCLLNYNQNFLQGVETEYSLAF- 293 + PF +L + T + + + + + + Sbjct: 126 ALDRSAREVRDRPFADLCVPADEQEALHAVFQHMLRTGHPIQHESHVVARDGERLLVEWH 185 Query: 294 --ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 + + + A D LT LPN L+ Sbjct: 186 GNTVRNGQGQVEYFFALGLDITERRRTQAQLEHIAHYDLLTGLPNRTLLQNRISHALDVA 245 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 ++ + L +D + ++ G +R + L ++E + L + G E ++ Sbjct: 246 RRRDRQVAILFLDLDRFKVVNDSLGHAYGDELLRQVSDRLRRRLREEDTLARWGGDEFIV 305 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++ + L + + + N + +G + + + + L+ + Sbjct: 306 LVDEVDDPQGLSLLAEGILAELAEPYRLSNGQEVFVGGSIGISLYPQDGRSAEQLIMKAD 365 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 Q+ ++ ++ L ++R AL++ + L+ QP + Sbjct: 366 TAMYQAKDQGR-SNYQFYTSALTLAANDRLALETSLRHALEREEFTLHYQPRVRTQDDVM 424 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRF 575 G + ++ D G+ PD F+P+ + L L VL + + T + Sbjct: 425 IGMEALVRWHHPDKGLTAPDAFIPMAEETGLITPLGLWVLRTACRQAQTWMRLYGEPIHM 484 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL L Q ++ +I + + + ++ LE+TE + ++ + +L G Sbjct: 485 AVNLSMRQLRQPDLVSQIDAILRDTGLPASSLELELTESVLMAGDGHTLTALAELKALGV 544 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 R+AIDDFGTGY++ LKRL D +KID FV DI + D I +I +A+ L VV Sbjct: 545 RLAIDDFGTGYSSLAYLKRLPIDALKIDRSFVSDIPHDASDMAIASTIIAMARTLGLEVV 604 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 AE VET +Q A L K G QG+ P Sbjct: 605 AEGVETPEQLAFLKKEGCDSYQGFGFSPPVDA 636 >UniRef50_A1ATR3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ATR3_PELPD Length = 754 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 100/583 (17%), Positives = 193/583 (33%), Gaps = 42/583 (7%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAG 241 R I+ + + E+ L + + L + + G Sbjct: 132 VRNILYRRHLERDHVLITSRLQHSEQLHRFLVESSPDLIFTLDNSGCFTFINSRIESLLG 191 Query: 242 YLVPVFF------IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN-----FLQGVETEYS 290 + I+ + ++PF L + Sbjct: 192 FSREELIGSCYDTIVLAEDLKTAQHPFTERRRGNRATTNLEIRLKCTPSHYRNFENHHIV 251 Query: 291 LAFILAVLISF----------SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + + + R + QA D LT LPN R Sbjct: 252 VMMSSTGIYGEHDNDFPLARCFSGTYGVARDITDRKIAEETIAFQAFHDHLTHLPNQRLF 311 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + +D + ++ +G ++++ L ++ + Sbjct: 312 KDRLEMAITHSKRHGGMVGVMFIDLDRFKIVNDTHGHAAGDELLKNVAHRLRHCIRAVDT 371 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 L + G E ++L + + + + E Sbjct: 372 LARKGGDEFTVLLPDLMRAEDAALIAEKIMHELGIPFSVAGQKFHVSASIGIAIVPRDGE 431 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 ++ LL + A ++ TK++ L N +R A+ + L+ Q Sbjct: 432 SIDTLLKSADIAMYRVKASGKN-GYRFFTPDMNICYTKRISLENELRQAIPNSEFELFYQ 490 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + ++ G++ P F+ L + + VL + LA Sbjct: 491 PQVSINGASIIGLEALIRWRHPTHGLLNPGDFIELAEETGMIGTITDWVLAEACRQLAHW 550 Query: 567 PCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R +VN+ P + ++ ++ R + + P ++ +EITE+ + S + Sbjct: 551 RSMGFSDLRIAVNVSPKEFERDDMVEQLSRFMSTFQLPPDSLEVEITEKILLRDTPSVIN 610 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ L + G RI+IDDFGT Y++ L++ IKID FV+D+ + I+++I Sbjct: 611 KMKTLRERGIRISIDDFGTCYSSLNYLRQFPISTIKIDQSFVRDLSEEHRISPIIQAIIG 670 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A L ++AE VET Q LH LG +QGYL RP P Sbjct: 671 IANGFGLHLLAEGVETHCQMQTLHALGCNEMQGYLFSRPAPAE 713 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 100/555 (18%), Positives = 200/555 (36%), Gaps = 28/555 (5%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIF--TLG 254 + + + A T+ ++ ++L+ ++ + GY + L Sbjct: 587 SARKQAEEELRLAHTVFEHSSEAMLVTDADNNIITINPAFSEMTGYSLEEVIGKNPKILS 646 Query: 255 VGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVR 310 G+ F W + T + EY+ + + S L + + Sbjct: 647 SGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWLAINNIYSEDGKLFRRVALFS 706 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 + + QA D LT LPN R +Q + + + +D + Sbjct: 707 DITEKKRADALIWNQANYDLLTQLPNRRLFSDRLQQEIKKSQHDHSQFALLFIDLDRFKE 766 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ G + + + ++E + + +L G E ++++ + + + Sbjct: 767 VNDTLGHSHGDYLLIEASHRIQRHLKETDTVGRLGGDEFTVIIANLPDPSVMTLIAQRVL 826 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + F + T LL ++ + Sbjct: 827 DALAAPYDLEGEIVYLSASIGITVFPEDATTSAELLKNADQAMYEAKKNGRNR-FSFFTP 885 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPD 536 M+ ++ ++ +R AL +Y QPI + + ++ + G ++P Sbjct: 886 MMQAMAQARMRMMRDLRNALGLNQFTVYFQPIVDLSSQRIHKAEALIRWQHPELGFISPA 945 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIA-GRII 594 +F+PL + L V + + + P + SVN P+ + A + Sbjct: 946 EFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDDFQVSVNKSPVQFRDRTQAHQDWM 1005 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +S +++EITE + + G ++AIDDFGTGY++ LK+ Sbjct: 1006 EYLSGLGLSGHNIVVEITEGLLLNADSGISDKLLHFRDAGMQVAIDDFGTGYSSLSYLKK 1065 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +KID FV+++ D + +I +A L V+AE VET Q+ LL ++G Sbjct: 1066 FDIDYLKIDQSFVRNLSGEGEDLALCEAIATMAHKLDLRVIAEGVETTAQRDLLAQIGCD 1125 Query: 715 YLQGYLIGRPQPLAD 729 Y QGYL RP P + Sbjct: 1126 YGQGYLFSRPVPAEE 1140 Score = 45.4 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 8/145 (5%), Positives = 31/145 (21%), Gaps = 11/145 (7%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVF 247 + ++ A + V + L C+ + + Sbjct: 458 RLEITKLKLAETTLKQAVEQQKMFIQQAPICVAMFDRDMRYLACSNQWQEEFGHQQGSLL 517 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-LQGVETEYSLAFILAVLISFSVCLL 306 + + + L ++ ++ +++ + S + Sbjct: 518 GLNHYDVHPDIPEKWRQAHQRALAGERLEEEEDLWIRADGQHLWTRWMITPWMDDSQTIQ 577 Query: 307 YMV---RIYHRSEWLNRRWHLQALT 328 ++ + A T Sbjct: 578 GIIISSENISARKQAEEELR-LAHT 601 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 97/532 (18%), Positives = 199/532 (37%), Gaps = 22/532 (4%) Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 S + + +++ P +D F + + + AV Sbjct: 797 SIIVTDANRVIVAVNPAFSDMTGYSPEEAVGRTPAFLQSGRHGKEYYAAMWRAVDQEGSW 856 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + +++ + + + + + + H A DPL+ Sbjct: 857 QGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIGVAADISSLKEAEEHIHHLAYYDPLS 916 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN R L + ++ + L +D+ + ++ G + + + + Sbjct: 917 ALPNRRYLMERAEYALALAERRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIK 976 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAW 441 +E + + +L G E L+L + + + + + + + + Sbjct: 977 EFTRETDTVARLGGDEFALLLPDLG-RDAVSQVADKILAALRKPFEHSGQTFAVTGSIGI 1035 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + + LL + + ++ ++ +L+ +R A+ Sbjct: 1036 SLYPHDGTDFETLLRNADTAMYHAKQQGRNQ-FRFYDPGMNVDILARLTVLSELREAIPA 1094 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 G+L + QP + G + ++ G+++PD+F+P+ +L VLE Sbjct: 1095 GELRTFFQPEIDLANGTLVGAEALVRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLED 1154 Query: 559 LLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + LA + VNL + R+ L RY + ++ LE+TE Sbjct: 1155 TCRHLAQWKKADQAPITVGVNLAARHFRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLL 1214 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 +M +++L G ++IDDFGTGY++ LK L +KID FV+DI + D Sbjct: 1215 DADAQTMIVLQELIALGCSLSIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDR 1274 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I ++ L + L V+AE VET++Q+ +L + G + QGYL RP + Sbjct: 1275 TISGTVVALGHSLGLKVIAEGVETEEQRRILLEQGCDFGQGYLFSRPLSSKE 1326 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 12/143 (8%), Positives = 31/143 (21%), Gaps = 9/143 (6%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVP 245 H Q + + R A ++LL ++ + GY Sbjct: 339 SERHHMQAALEAEKERADLSR-RFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSRE 397 Query: 246 VF--FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + G + + + + + + Sbjct: 398 ELAGMTLADVVAGDVEGVEHGRLDEALARGGGVWESVHTRKDGVPVPVELSVRSISVEGS 457 Query: 304 CLL-YMVRIYHRSEWLNRRWHLQ 325 + +VR + + Q Sbjct: 458 DFVQAIVRDVTERKRIELALARQ 480 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 92/570 (16%), Positives = 198/570 (34%), Gaps = 29/570 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFI 239 R ++ I + + + + + ++++ ++ T I Sbjct: 174 AFHRKLLKIGSFIIGIALEQQKINEQLYLSSKVFENSTEAIMIADANKIIISTNKALHII 233 Query: 240 AGYLVPVFF--IIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILA 296 G+ + + F W +V EY ++ Sbjct: 234 TGFTAEEVIGKPTSIVTSIRHSTKFFQKIWLSVKQSGHWQGEVWNRHKYGREYPAWLNIS 293 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + L + + QA D LT LPN Sbjct: 294 SVLSKKGSICYYLINFSNITDKKKSDEIIWRQANYDSLTGLPNRNMFYDRLSHDIKNAAR 353 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D + ++ +G + + + L ++E + + +L G E ++L Sbjct: 354 TGMLLAVLFIDLDRFKEVNDSFGHSVGDALLVEAAKRLNGCVRETDTVARLGGDEFTIIL 413 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 +G + + ++ ++ ++ H N + F + + + L+ Sbjct: 414 NGINDQHCAERIIQMILLELTKPFHLNAKLAYVTASIGVTFFPADAGSAEILMKNADQAM 473 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 + + + T + + +R AL + L L QPI Sbjct: 474 YAAKNNGRNCC-SYFTSNMRKATETRSRIAYELRHALREQQLFLMYQPIVKLATGSIHKA 532 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVN 578 + ++ + G ++P +F+ + + NL + V + + +A + + S+N Sbjct: 533 EALVRWQHPERGTVSPVEFISIAEESNLISEIGDWVFKQAVNQVAAWQANYNTNFQISIN 592 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 P + K + + ++I+EITE E + + G ++A Sbjct: 593 KSPKQFISK--MSDWVNHLHEQKLDGHSIIVEITENLLLDVHELVVKQLLNFRDAGVQVA 650 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LK+ D +KID F+ ++ + + D ++ ++ +A + V+AE Sbjct: 651 IDDFGTGYSSLSYLKKFDIDYLKIDQSFISNLDSRSNDRILCEAVITMAHRLGMKVIAEG 710 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q+ LL +G Y QGY +P Sbjct: 711 VETDSQKQLLIAMGCDYGQGYFFSKPLTTE 740 >UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=Q2BCE5_9BACI Length = 744 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 100/550 (18%), Positives = 195/550 (35%), Gaps = 29/550 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV-----------PVFFIIF 251 DI E R L L+ + ++ + L+ P+ + Sbjct: 190 DITDRQESEDRYRGLVELSPDFIGVISGNVIVYINEAGCRLIGASSKEQLLGKPIINFVN 249 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVR 310 ++ L T + + + + + + R Sbjct: 250 KEATFEIYNTL--LAADSDTAGKRRFEVQAKRLDGVLVDVEVSSMPIRYGGREAVQVIGR 307 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-----EAGKSFCCLRIDNLEFMSR 365 + R A D LT LPN + + + + + L +D + ++ Sbjct: 308 DITERKKSERTMEYMAFYDTLTGLPNRNEIMKQLQGILNSGKEKAAVLFLDLDRFKIIND 367 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G ++ L + + + G E +++ + + +++ + + Sbjct: 368 TKGHSTGDLLLKKAGIRLEDTVGSLGLVARQGGDEFIILFEE-KEKQQIEGAARAIIEQF 426 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + + L+ + + Sbjct: 427 NKPFILEGEEFYITPSIGISLYPEHGTDQETLIKHADTAMYLAKERGKN-NFQFYTSSLE 485 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 G ++++ L N +R ALD+G+LLL+ QP + + +G + ++ + DG ++ P +F+ Sbjct: 486 GLASRKMALENGLRKALDRGELLLHYQPQIDLKTGKLKGTEALVRWQRPDGHLVPPGEFI 545 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L +L + + + G +VN+ L + + Sbjct: 546 PLAEETGLIVPMGKWILRTACEQHKRWKLEGAGSVPIAVNISVRQLEDPEFIMYVKTVLS 605 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 I P + LEITE N E + + +L K G R++IDDFG GY++ LK L D Sbjct: 606 SCDIEPGCLELEITES-IMQNIEKATIALNELKKIGIRLSIDDFGKGYSSLSYLKHLPID 664 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 IKID FV DI+ + +V++I D+ + SVVAE +E ++Q L + QG Sbjct: 665 TIKIDKSFVDDILDPAQNGSLVKAIIDMGLNLNFSVVAEGIEHKEQAEFLLENNCPVGQG 724 Query: 719 YLIGRPQPLA 728 Y RP Sbjct: 725 YYFSRPVTGE 734 Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 58/212 (27%), Gaps = 23/212 (10%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 R F + I ++ ++ +F + V +L+ +V + +LF Sbjct: 2 RFFARNYTILVWIIILCFIFLVDEAIKTALAYYFPPRNL--WVFELIHTVISVGLLIVLF 59 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDF 238 F Q ++ A +R + +++ L + Sbjct: 60 ---------LVFIQKGIQKTTAELRKSNQRLNNIFDTLDVAIWHHNMKSGRLMITSGIEK 110 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLT----WAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + G+ F+ L + +++ V + ++ + Sbjct: 111 LYGFPRESFYRDPDLWRKVIHPNDVSVLNEREQKVKQGEPVVSIYRIIRPEGGIRWIQDR 170 Query: 295 LAVLISFSVCLL---YMVRIYHRSEWLNRRWH 323 ++ L+ ++ + R+ Sbjct: 171 GIPVLDKKGRLIEFSSVLFDITDRQESEDRYR 202 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 102/564 (18%), Positives = 200/564 (35%), Gaps = 25/564 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY 242 R +++ A+ + + + + + ++++ +L + I+GY Sbjct: 277 RAVIALFAARAGTELARHQAEEQLQLIDQVFEGSRDAIIITDAQTRILQVNPAFEAISGY 336 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + + + A+ + + Y ++ + Sbjct: 337 REEELVGRTPRLLQSGHQGPRFYREMWEALKSRGHWQGELWNRRADGETYPSLLSVSAVT 396 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAG 349 + + + + A D LT L N R LE+ Sbjct: 397 NDNDEVTHYIGIASDITSHKAAEQHIDYLAHYDTLTGLGNRRLLEEELERMLRNARGGRP 456 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + + L L L ++ G E ++ G Sbjct: 457 FALFFLDLDRFKNINDTLGHESGDRLLEEVADRLRDLAGPQATLCRIGGDEFAILAPGLS 516 Query: 410 TEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++ SR L + + + L+ A Sbjct: 517 HRQTAGIARQLVEGISRPYEITERPLVVTCSVGVAVHPRDGTRREALISAADTALHYVKA 576 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 H E ++ +++ L N +R AL +G+ LY QP+ + G + +L Sbjct: 577 HGSNH-YQFHEPGMTAAAAERLHLENDLREALLRGEFELYYQPVLDTERLTVCGAEALLR 635 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 + G++ PD+F+PL + L VL A G SVN+ Sbjct: 636 WHHPEAGLIPPDRFIPLAEETGLIRPIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQ 695 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + + + + ++P A++LEITE + ++ + +L G +++DDFG Sbjct: 696 FWRDELPQAVRQALEAQALAPDALVLEITESVLMHGSANTETRLRELKAMGVGLSLDDFG 755 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR D +KID FV+D+V + D + +++ + L VVAE VE+ + Sbjct: 756 TGYSSLSYLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAE 815 Query: 704 QQALLHKLGVQYLQGYLIGRPQPL 727 LL + +QGY RP P Sbjct: 816 HLPLLRRARCDRVQGYHFSRPLPA 839 Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 31/133 (23%), Gaps = 10/133 (7%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 E L L + + + GY V + L Sbjct: 22 HRVLEASPAVTYALTRDGQSLRPVYISAHIEELLGYPVADWMADPQFWRQCLHPDDRERV 81 Query: 267 WAVSTL----CLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLN 319 A S L+++ + + L ++ + + + + + Sbjct: 82 LAQSARHLPEGLVDHEYRVRHRDGSYRWVHDRLRLMPARDGRPAMAVGVWQDITHRARAD 141 Query: 320 RRWHLQALTDPLT 332 R + LT Sbjct: 142 RLLRTLSH---LT 151 >UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Chroococcales RepID=Q31P31_SYNE7 Length = 1047 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 110/559 (19%), Positives = 204/559 (36%), Gaps = 30/559 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVF--FIIF 251 ++ A E+R L+ V L L +P + + Sbjct: 482 RKKIEAELQTSEERYRLLAENMNDLVCLHQADGTYLYVSPSAEALLGFSSEEMVGQNPYD 541 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---M 308 AV L + + + ++ ++ Sbjct: 542 FFHPEDCDRIRDEAHQAVLMGAELPIVYRMRKKLGGYIWFETLTKPIMDDQGVVIGLQTT 601 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QEAGKSFCCLRIDN 359 R + + + A D LT L N L + E Q + L +D Sbjct: 602 SRDVTQRIEIQNQLQYDACHDSLTGLANRNLLIERLELSLKRSKRLQNYKYAVLFLDLDR 661 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + SI + L +++ ++ +L G E ++++ +T + Sbjct: 662 FKVINDSLGHITGDQLLVSIAQKLQSIIRSHDLAARLGGDEFVVLVEDIQTFDEPIKVAE 721 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + + + E+ LL ++ + + Sbjct: 722 RILAAIQVPLELEERSIYTSTSIGIVFGSHEYESATQLLRDADTAMYRAKSRGRAR-YEV 780 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 + + Q ++ L N +R A+ + + +LY QPI + G++ ++ GI Sbjct: 781 FDSAMHSQALARLHLENDLRQAIARQEFVLYYQPIIQLQTGKITGFEALIRWQHPTEGIK 840 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIA 590 P +P+ + L D VL + L+ SVNL L ++ Sbjct: 841 LPIDLIPIAEETGLITSIDYWVLNQACRQLSEWQASYSQAADLSMSVNLSAQNLQHDHLM 900 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + + I P ++ LEITE N + ++ + +++ G I+IDDFGTGY++ Sbjct: 901 DEIQSVLQATKIKPGSLTLEITESMLIENTDQTIQLLAAINEQGIEISIDDFGTGYSSLS 960 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L +L + +K+DG FV+ I T + + IV +I L L +AE +ET +Q LL + Sbjct: 961 YLHKLPVNNLKVDGSFVRKITTESTNYQIVNTIIALNNQLGLKAIAEGIETHEQLDLLSQ 1020 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG QY QGYL RP D Sbjct: 1021 LGYQYGQGYLFARPLNAKD 1039 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 119/585 (20%), Positives = 214/585 (36%), Gaps = 30/585 (5%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF---TLSWLAALSVLLL- 228 Y + R A + RD E R ++ + +++ Sbjct: 130 LQGTERYLAIDAGPVRDSSGRIIAVVETLRDRTSHKLAELRLRQMASVFEHSQEGIMITD 189 Query: 229 ----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 +L + GY + + L ++ + Sbjct: 190 PATRILDVNASFVRVTGYSREEALGRTPTLLKSGLQDAAFYRALWRDLNETGRWHGEIWN 249 Query: 282 LQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + Y + + + M + R A D LT LPN Sbjct: 250 RKKSGELYPEILHINAVQDPSGRVTHYIGMFIDITDLKNSQSRLENLAHYDVLTGLPNRL 309 Query: 339 AL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L + A E + C L +DN + ++ H+G + I R L ++ N Sbjct: 310 LLGYRLRQALDDAQRHERLAAVCFLDLDNFKLVNDHHGHETGDRLLIDIGRRLRDTLRSN 369 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E +++L+ + L +++ L + + + + + + + Sbjct: 370 DTVARLGGDEFVILLNDLRNQEELDNVLVRLLDGVAHPVRIDALQIVITVSVGVTIYPLD 429 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 LL Q+ + + + L IR AL G+ LY Sbjct: 430 DHDPDTLLRHADQAMYQAKQMGRNR-YQLFDPEAANAMQSRHRELERIRQALQHGEFQLY 488 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + + G + ++ + G++ P +FLPLI L VL L + Sbjct: 489 YQPKVDMRLGQVVGMEALIRWRHPERGLVPPLQFLPLIEASPLIVEVGEWVLHEALGQIR 548 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESS 623 + + SVN+ Q++ R+ + + +P+ + LEI E A + +S Sbjct: 549 QWCAEGRPLTISVNIAAHHFQQRDFVLRLQTILAEHPEATPRLLELEILESAALEDIQSV 608 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + G R A+DDFGTGY++ LK+L A+ +KID FV++++ ++ D I+ + Sbjct: 609 RGIMTACQAMGVRFALDDFGTGYSSLSYLKQLPAETLKIDQSFVRNMLEDSEDLAIIEGV 668 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LAK V+AE VET +Q LL + G + QGY IGRP P Sbjct: 669 IGLAKVFRKEVIAEGVETPEQGLLLMRFGCDHAQGYGIGRPMPAE 713 >UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPK3_9GAMM Length = 842 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 121/752 (16%), Positives = 228/752 (30%), Gaps = 41/752 (5%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 L + + + + ++ L L Sbjct: 81 LVLATAFLAVGLLDFLHLMTYPQMPDFITPNSSQQTIFFWLAARLVGALALLLYVALPLV 140 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 ++ G+ V L A L + + ++ G+V + Sbjct: 141 PRSQGPAPRGMLAGALVLVALLAWVGLWHEQRIPALFIPGEGLTPFKIALEGVVVALHAA 200 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL------------IYNMLFYY 185 + L+ A I ++ L + Y Sbjct: 201 TLVILLLRPQLMQRPGMPLVAAALMILMASEVFFTLYDNLSDGFFVLGHIYKVAAYALIY 260 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGY 242 I S R +++R L A VL+ + + Sbjct: 261 WAVFIESVRAPMAQLRAAHRDIELRQQRYEQLIDTAPDGVLVTDGGGTILMANRNLERLF 320 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY---------NQNFLQGVETEYSLAF 293 P +I + +V N + + TE+ + Sbjct: 321 GYPRRHLIGQPVENLIPERLREHHRSVRLQQGDNISERTMGQIPDLRGRRLDGTEFPVDI 380 Query: 294 ILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 L + +R + R QA D LT LPN L Sbjct: 381 SLNAFEDQGGRRITAFIRDITDRQRREARIQHQATHDSLTGLPNRWLLHDRLAQSIAHAS 440 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 E + L +D+ + ++ +G +R + + L + + + G E +++ Sbjct: 441 RHEHRIAVMLLDLDHFKMINDTFGHHEGDELLREVAQRLKDAAGTDATIGRFGGDEFMIL 500 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWN-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 L E ++ + ++ H F + L+ Sbjct: 501 LPEITDELQVGERGQEILAQFDRPFHTGPTRQFSSSASLGIALFPQDARDANTLVRYADM 560 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 ++ E + Q + L ++ AL+ L L+ QP+ + Sbjct: 561 AMYEAKRSGRN-TYAFYSEHLDAQVRAEQQLQERLKHALEHDQLALHFQPLIDAHSGAVT 619 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 + +L + G + P +F+P L V+ + LA + Sbjct: 620 AAEALLRWNDPELGAVPPSRFIPSAEANGLILPLGDWVIRRACQQLADWAQLDVDTSICI 679 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L Q ++ R+ K SP+ + +E+TE A ++ + ++ L G R+ Sbjct: 680 NVSALQFRQPDLVSRLAAALKEAGASPEHLEIEVTETVAMADVALTREHLSGLKALGVRV 739 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ LK L D IKID F+ I + MI+RS+ L + L +VAE Sbjct: 740 SLDDFGTGYSSLAYLKSLPIDKIKIDRSFIAGIGHDRDAEMILRSVMGLGHSLHLKLVAE 799 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET +Q A L + G QG+ + + Sbjct: 800 GVETAEQLAFLRREGCDLYQGWFYSPALSVEE 831 >UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR2_9RHOB Length = 1031 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 122/745 (16%), Positives = 239/745 (32%), Gaps = 42/745 (5%) Query: 12 KIFTLAFTLTVVLIQLSRFIS--PLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLC 69 + L ++ L+ + I + + +F V Sbjct: 243 RKVMYPTILLSLIGGLASALGNAQHLTIEGVAALSLLASALSVTAARIVFIRTKTHKVTI 302 Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 + + + + A + G + +W + L Sbjct: 303 YYTSLGIGSL------VGLFGYTLALPSDSVLAGWTFDNFVLQAVGASLTTLWAFMTGLI 356 Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 L + I + + + + + R+ Sbjct: 357 LFSIFKYSGMFQKADEIDLNDSPIVSTISQMENLIGKLVWHDAKLDERLPVRDTDPQERL 416 Query: 190 IVSPHFAQILWRRDIAPSLGKE----------KRAFTLSWLAALSVLLLLLCTPYENDFI 239 + + D E + T + A + + E + + Sbjct: 417 ASLFNSFLDKLQSDEKRRKISETSDSKQQEELSKLATFAEGAFEGLAISTDGIIVECNHV 476 Query: 240 AGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 L+ +L A+ L + Sbjct: 477 LYELLGYSAGEMRGSSLLSHVAPDYREKARAAIQANEPTPNEVILLSKTGERIPIEVRGR 536 Query: 297 VLISFSVCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------ 349 ++ L + VR + + R A D LT LPN + +Q Sbjct: 537 LMEVGDENLRVSAVRDMRKQKEDEARILHLAQHDMLTGLPNRTYFRERFQQAIENQACAE 596 Query: 350 ---KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + L +D + ++ YG + I+++ R L + ++ + +L G E ++ Sbjct: 597 ETISAVMVLDLDRFKDINDLYGHPVGDKLIQTVARRLNACVTHHDTVARLGGDEFAIIQV 656 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 +T + + N + S+ IH N + + L+ + Sbjct: 657 NLKTTAEVGLLTNKIIEVLSKPIHVGNNITIRTSASIGIALIPEHGTDPDELMSKADIAL 716 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 ++ E+ + + + +R AL+ +L L+ QP + G+ Sbjct: 717 YEAKEAGRN-TFAFFEDKMEEAILLRRTMEGDLRNALENEELQLHFQPQARSDTRSIVGF 775 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + +L + G++ P+ F+P+ + L VL + P R VNL Sbjct: 776 EALLRWNHPEKGLIAPNNFIPVAEESGLIIPIGRWVLNEACAQASQWPERY---RVGVNL 832 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P+ + + + R ++P+ + LEITE + ++ + QL + G IA+ Sbjct: 833 SPVQFCDEYLIQEVEGALARSGLTPERLELEITESVLIHDDRRALNTLRQLKELGITIAL 892 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L+R D +KID FV + A I+R++ DL +A + V+AE V Sbjct: 893 DDFGTGYSSLSYLRRFPFDRLKIDRSFVSGVTQTPELAAIIRAVIDLGQALGMEVIAEGV 952 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRP 724 ET+ + LL +QGYLIGRP Sbjct: 953 ETEPELELLRNESCDEVQGYLIGRP 977 >UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL67_THISH Length = 685 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 113/679 (16%), Positives = 214/679 (31%), Gaps = 49/679 (7%) Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 + ++ G + + + R + + L + I+ S+ Sbjct: 8 QRITLIGGVLLAALTLVSGFAVYAVMQRQLEAVLVNSLQSSLHSDRRLFETEIRGSVVNA 67 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 + P I +A SL R++ +Q Sbjct: 68 LTVSTRPFVIQNLARLREAPEDASAAHSL--------------QRLVRRLVKSQQQTAEA 113 Query: 204 IAPSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 A E+R A V + + GY + Sbjct: 114 NARLRDLEERWRFALDSAGAGVWDLDLSAGKILLSVRCKHMLGYEEHEIGASAEEWQALV 173 Query: 259 RYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLA----FILAVLISFSVCLLYM 308 A + + + + L+ Sbjct: 174 HRDDAPALIAACQRLVDGEVQSFTHEHRKRCKDGSWKWVQARGMVAARDENGAPTRLIGT 233 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNL 360 + QA DPLT LPN R A + + +D Sbjct: 234 YIDISERKRAEEIIQQQANFDPLTKLPNRRLFLDRLDQQIAKCQRTGAALALLLIDLDEF 293 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + ++ R + +++ + + +L G E ++LS + ++ + Sbjct: 294 KEVNDTLGHDVGDVLLQEAARRISGCIRDTDTVARLGGDEFTVILSDLTGKAHVEEIAQK 353 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L S + + + G+ E + L+ + Sbjct: 354 LISRVAEPYYLREGVAHISASIGITLYPGDAEDMGELMKHADQAMYSAKRLGRNR-FCYF 412 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 + K++ L +R A++QG + QPI + + + +L + G++ Sbjct: 413 THALQEAAQKRLRLSRELRQAVNQGQFEAHFQPIVELASGRIQKAEALLRWHHPERGLVG 472 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRI 593 P +F+PL L V ++ + SVN+ PL + A R+ Sbjct: 473 PAEFIPLAEDTGLIEGVGDWVFREAVRRARVWRDRFGTDIQVSVNMSPLQFRSEG-AERV 531 Query: 594 IRLF---KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + +++EITE + + + G +IAIDDFGTGY Sbjct: 532 ESWLYHLEEMGVRGEQIVIEITENLLLHAHDEVTRQLFRFRDAGIQIAIDDFGTGYCTLS 591 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ D +KID FV+++ + D + ++I +A L V+AE VET+ Q+ LL Sbjct: 592 YLKQFPIDYLKIDRSFVRNLENDPNDVALSKAIIVMAHELGLKVIAEGVETEGQRRLLSD 651 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G + QGYL R P D Sbjct: 652 AGCDFAQGYLFARALPAED 670 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 96/567 (16%), Positives = 201/567 (35%), Gaps = 35/567 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLS--WLAALSVLLLLLCTPYENDFIAGYLVPV 246 I Q+ + + L + Y D + G + Sbjct: 128 DITEEKELQLKYSQQAQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNFSI 187 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 F + + + + F ++L + Sbjct: 188 LF------SDNITSAYEKWISELKENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETT 241 Query: 304 CLLYMVRIYHRSEWLN----RR---WHLQALTDPLTLLPNFRALEQAPEQEAG------- 349 ++ ++ + + QA D LT LPN EQ Sbjct: 242 EVVSLIHDITEQKKAEAVLQEQKNILRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSEK 301 Query: 350 -KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G + +R + + +++ + L +L G E +++ Sbjct: 302 DFALFFIDLDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDL 361 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + ++ + L + + + + LL ++ Sbjct: 362 GHPEDASVLAEKILLVLQKPMYIDEYTLYISGSIGISLYPQDAMDTESLLKYADTAMYKA 421 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEI 522 + + ++ +++ + +++ A+++ +L ++ QP + G + + Sbjct: 422 KENGRN-TFEFYAPEMTEYALERIAMKTSLKEAIEKEELCVHYQPQIDARAECIIGVEAL 480 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMP 581 + G++ P+ F+ L L D V+ + +K ++T + ++N+ Sbjct: 481 VRWQHPTRGLLHPEAFISLAEDTGLIVDIDKWVMRTAMKQVSTWHQEGLVSDVLALNISI 540 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L N I + P+ + LEI E Q N ++ +++L G I+IDD Sbjct: 541 KQLEGHNFMEEIAACLDDFDFKPKWLELEIPEGQVMKNHTETIERLKELSVMGIGISIDD 600 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL + +KID F++ I N D IV++I LA + L V+AE VET Sbjct: 601 FGTGYSSLSLLKRLPINRLKIDKSFIEFIP-NEEDVAIVKAIIALANSLKLDVIAEGVET 659 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ L + G +QGY RP Sbjct: 660 DDQKDFLVENGCTKIQGYYYSRPIASE 686 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 9/90 (10%), Positives = 21/90 (23%), Gaps = 19/90 (21%) Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDP 330 + N + ++ + ++ + L ++ QA Sbjct: 88 VFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIRMVGTHTDITEEKELQLKYSQQA---- 143 Query: 331 LTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 Q EQ + L +D Sbjct: 144 -----------QVLEQ-IHDAVILLDMDGF 161 >UniRef50_Q2S9L1 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=2 Tax=Proteobacteria RepID=Q2S9L1_HAHCH Length = 1263 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 99/566 (17%), Positives = 201/566 (35%), Gaps = 22/566 (3%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 YY + + H + + E + L A L L+ + I GY Sbjct: 536 LYYGVVSLRTRHAREKAEESLRLRNRAVESTPNGILILNARRPDLPLVYVNPAFERITGY 595 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 F +L + + + + + +A + Sbjct: 596 SSDEVLGKGPFFLQSDIDEDRRRESLHFLIRNREEGCVLLRNQRKDGSPFWNELHIAPVY 655 Query: 300 S---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + ++ S + QA D LT LPN + + Sbjct: 656 DDRRMLTHFVAVINDVTESRHYQEQLEYQATHDDLTGLPNRNMMRDRLGQELWRAARNKH 715 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L ID + ++ G ++ I + L + + ++ + + G E +++L Sbjct: 716 KVAIVFLDIDQFKLINDSLGHNAGDAMLKVIAKRLTGMARASDTVVRYGGDEFVIILPDI 775 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 ++ ++ L ++ I ++ + + + + + + L+ + Sbjct: 776 SPPEKVASFISRLMEVIAQSIQLDHRDIHVSASIGVSIYPQDGDHPEVLIKNADIAMYLA 835 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEI 522 E ++ +++ L +R ALD+ L QP + G + + Sbjct: 836 KEEGRNR-FHFFTEDLNKTAMERLDLEVRLRAALDKQQFHLEYQPQVDLRSGVITGVEAL 894 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMP 581 L + + G + P KF+P+ + L VL + S+NL Sbjct: 895 LRWREPELGDIPPGKFIPIAEETGLIGAIGEWVLHAACVQAKAWSDLVAHPLTMSINLSA 954 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + + + + + +E+TE N + L + G ++A+DD Sbjct: 955 KQLTMARFDSALHSILTDTAVDCRYIEIELTESAIMRNVNEMRERLNILKEQGLKLAVDD 1014 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FG GY+++ L+ D +K+D FV+DI T+ A I R++ +A++ + VVAE +ET Sbjct: 1015 FGVGYSSFSHLRSFSFDRLKLDITFVRDITTDPNTASIARTVMSMARSMHMQVVAEGIET 1074 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPL 727 + Q L +LG QG+ +GRP Sbjct: 1075 EAQLRYLQRLGCDVGQGFFLGRPACA 1100 >UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850699 Length = 676 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 116/595 (19%), Positives = 220/595 (36%), Gaps = 22/595 (3%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 D F+ + + + L + L + ++ ++ +E Sbjct: 69 VVPDVQVAFSFYTENKIGMILPFFVQLCFMLLSWFIPDILSEETLQKQYDQLKEREIWYH 128 Query: 216 TLSWLAALSVLLLLLCTP-----YENDFIAGYLVP-VFFIIFTLGVGKLRYPFLNLTWAV 269 +L ++V+ + + GY V F V +P + + Sbjct: 129 SLFENNPVAVITFDHRGNIKHTNPKIFELTGYQEDYVVEHSFKPYVHHKDHPIIYKEFKK 188 Query: 270 STLCLL-NYNQNFLQGVETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + + N+ + ++ + + V + +V S+ ++ H A Sbjct: 189 ALVGVGSNFELRLIHQDGRILQTMIVMVPVLIENKVVGVHCLVTDITTSKEAEKKIHHMA 248 Query: 327 LTDPLTLLPNFRALEQA-----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 D LT LPN R EQ Q + L ++ + ++ G + I R Sbjct: 249 YHDDLTGLPNRRYFEQITAEIIKRQPMKMAILLLDLNRFKVVNDTLGHAAGDQLLIEIAR 308 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 + + + + ++ G E +L+L + + H+ N + + I N+ + Sbjct: 309 RIDDKIGVQDHVARMSGDEFILLLPTIRGKADVFHIANHIHKSLEQPILINDHEIITSTS 368 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + E L LL + + + + L IR+A Sbjct: 369 IGVAMYPDHGEDLTTLLKTADVAMYTAKKKGAAQTF-FYSNSLHAKEINPIQLEEDIRSA 427 Query: 499 LDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + D L+Y QP N G + ++ GI++P F+PL + L V Sbjct: 428 IKHEDFLIYYQPKFSTINGRMIGVEALVRWKHRHKGIISPGHFIPLAEETGLIIPLGAHV 487 Query: 556 LESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + L SVN+ + + + ++P+ + LEITE Sbjct: 488 LRKVCLKLKEWESRGHKDIIVSVNVSSRQFHDDHFLQTVRDILIETGVNPRQIELEITES 547 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 A + +++L + G I IDDFG Y++ LK+ D +K+D F+++++TN Sbjct: 548 TAMEQVYRAERILKELSELGITITIDDFGIEYSSLNYLKKFAVDTLKVDKSFIRELLTNE 607 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + IVR+I +A L +VAE VET++Q L G QY+QGY RP P + Sbjct: 608 SNQAIVRAIIVMATHLQLDLVAEGVETEEQLKWLQMNGCQYVQGYYFSRPIPCEE 662 >UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLU9_AZOVD Length = 834 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 121/802 (15%), Positives = 258/802 (32%), Gaps = 84/802 (10%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCG 70 + ++ L L + F++ ++ ++ I ++ + V + G R ++ V C Sbjct: 21 LAVWGLICLFGGSLPPVKYFLTLHQMVETASIVVSVLIFAVGWHTFRMHGNRVILMVSCT 80 Query: 71 MFCTNLWNFHLSFLQTA---VMLGSQTFVVLCACAILRWQLGT--------RWRYGLTSR 119 + +F + + + + + R WR ++ R Sbjct: 81 FLGVAISDFSHMLSYSGMPDFLGPNSPEKAIGFWLLARCLTALGVLIIACLPWRLEVSGR 140 Query: 120 YVWQ-----RLFWLGLVTPIGIKCSMY-----------------------------LVGS 145 R+ + L + I + + + Sbjct: 141 SAAIDPDRWRVLLVTLCAMVSIHLVLLLFPEILPRTYQEGVGLTEFKRGVEFSIIAIHAA 200 Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM---------LFYYLTRMIVSPHFA 196 + + LL + + + +F ++ ++I Sbjct: 201 SIVLLSVRRRRDMGLEKGLLICSLLVMMMGEFFFTIYSDVTDAYNIFGHIYKIIAYLVLY 260 Query: 197 QILWRRDIAP----SLGKEKRAFTLSWLAALSVLLLLLCT-------PYENDFIAGYLVP 245 + ++ I + L +L L P + Sbjct: 261 RAIFVESILAPYKFLEDSRQHVEVLMGALPDIILEARLDGLLLSAHVPTDGKLFGEKKPK 320 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFS 302 + + A + + E ++L S Sbjct: 321 AGDYLQDRLPSQAMDCLTGAMRAAESGGQGTGLRFRTGKGAEELVFDVSASLLAQRSDRS 380 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCC 354 + ++R + A D LT LPN + +Q + Sbjct: 381 SHFVILIRDVTEQARNQSKIEQMAHFDALTGLPNRTLFNTCFDVEATRCEKQRQPLALIF 440 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS--GPETEG 412 + +DN + ++ G + + + L +++ + + + G E + +L T Sbjct: 441 MDLDNFKNVNDSLGHKVGDALLVELAARLEKVLRPRDMVSRQGGDEFMFLLPEADVRTAE 500 Query: 413 RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ + I L + F + L+ L ++ Sbjct: 501 QMTECIKRSVEVPIQVGQYTLHVSASMGICMFPQDGRDLETLSSHADIAMYRAKQE-RRS 559 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 E + + +LL +R A+ G L +Y QP + ++ EG + ++ + Sbjct: 560 HYAFFSEEMQACAARSLLLEGALREAVQWGQLDVYYQPQFDITGRKLEGAEALVRWRHPE 619 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLLQK 587 G ++P +F+P+ + VL + + +VN+ Sbjct: 620 LGFISPAEFIPIAEITGQIIKIGDLVLRRATQQMRHWLDAGLPGDMSIAVNISMAQFRDT 679 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + +I + P A+ LE+TE A + E + + L G +++IDDFGTGY+ Sbjct: 680 ALLEKIDTALAESQLPPWALELELTESVAMDDPEQVVDIVRSLRSRGVKLSIDDFGTGYS 739 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+L+ +KID F++ I + D IV++I LAK + +AE +ET++Q+ L Sbjct: 740 SLSYLKKLRVHKLKIDRSFIQAISSAGSDRSIVQAIIGLAKDLDMQTIAEGIETEEQRQL 799 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L LG QGYL +P P ++ Sbjct: 800 LEALGCDSGQGYLFCKPLPASE 821 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 119/565 (21%), Positives = 212/565 (37%), Gaps = 26/565 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND--------F 238 R ++ RR + E++ A + V +L + + Sbjct: 109 RRARLAVVEDLTEPRRHMRALEESEQQYRATMGAALVGVYVLQDFRFRYVNPELCRYFGY 168 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 A LV + + + Y L + L+ + + A Sbjct: 169 SADELVDKLGPLDLVVAEEREYVREQLARRARGEPGHPFELTGLRRDGSHFPFMVFGAPS 228 Query: 299 ISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + V + R A DPLT LPN LE Sbjct: 229 TWRGQPASVGTVFDLSEIKAAEDRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGRDRRA 288 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D + ++ G +M +R + L ++ ++ + +L G E +++ Sbjct: 289 ATLMFIDLDRFKTVNDSLGHLMGDQLLRLAGQRLRDSVRLSDTVARLGGDEFIVLAPDTG 348 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 EG + + + + ++ L + R+ + + LL Q+ Sbjct: 349 AEGAV-RLAEKILEVFAAPFDLDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQAK 407 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 ++ + +LL +R ALD G L L QP+ + G + +L Sbjct: 408 REGRN-GFRMFSIEMNAPILESLLLETQLRRALDHGQLSLVYQPMVDIASGRIVGAEALL 466 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPL 582 G ++P +F+P+ + L VLE L + +VNL L Sbjct: 467 RWQHPQHGEISPVRFIPVAEESGLILPIGEWVLEQALGQVQRWRAAGHPDLVMAVNLSAL 526 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + NI+ ++RL Y + A+ LE+TE +AE ++ + L G R+++DDF Sbjct: 527 QFERLNISNTVLRLLDHYGLPGSALELELTESVLMEDAERAVAAMLNLADRGVRLSVDDF 586 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L RL +KID FV++I ++ + R+I DLA++ +L V+AE VE + Sbjct: 587 GTGYSSLAYLTRLPLAKLKIDRSFVRNIPSDASARSVARTILDLARSLALEVIAEGVENE 646 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 Q LL + QGYL RP P Sbjct: 647 AQLLLLREWCCDQAQGYLYSRPVPA 671 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 107/566 (18%), Positives = 210/566 (37%), Gaps = 26/566 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 ++ + + E R + A ++L+ D Sbjct: 349 QLQSANATLEEKVATRTRELQISEARFRQMFEHHASPMMLIDPLGGAVVDVNQAAAEFYG 408 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ--GVETEYSLAFILAVLI-SFSVC 304 + I + + L F + + + Sbjct: 409 YRIAEMQAMNIAQINLQTEEDCRPQQTKGNCFFFSHQLASGEVRLVEVHSSPVEVDSRPL 468 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 L ++V L + H A D LT LPN R L + L Sbjct: 469 LFFIVHDITERRHLEEKMHDLAFYDLLTKLPNRRLLLDRLEKALLSGTRSRHHSALMFLD 528 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETE 411 +D+ + ++ +G + + + +L ++E + + G E ++++ + Sbjct: 529 LDHFKVLNDLHGHDIGDQLLVEVANRILGCIREQDSAARFGGDEFVVMIEDLSENLSDAV 588 Query: 412 GRLQHMVNIL---NSRQIHWN-NTGL---DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + F ++E L+ LL Sbjct: 589 NQADSVAEKIRCALAAPYLLKRGEEVISHHCSSSIGVTLFRDHEENLEQLLKWTDMAMYH 648 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEI 522 + + + ++ + L N + TAL++ L+ Q + EG + + Sbjct: 649 AKDAGRN-VIRFFDPVMQTAIENRAALENDLHTALEERQFELFYQIQVDRDGRAEGAEVL 707 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 L G+++P +F+PL L VL+++ +A +++ +VN+ Sbjct: 708 LRWRHPQRGLVSPAQFIPLAEDTGLIVPIGEWVLDTVCAQIAKWQGEQRNLVIAVNVSAK 767 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q N + ++ +R+ +SP + LE+TE N + ++ ++ L FG ++DDF Sbjct: 768 QFRQSNFVELVQQIIQRHQVSPALLKLELTESLVLDNIQDTIDKMKVLKAFGVSFSMDDF 827 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+L D IKID FV+DI T+ D ++V++I DL + V+AE VE++ Sbjct: 828 GTGYSSLSYLKQLPLDQIKIDQSFVRDIATDKTDLVMVKTIVDLGVNFEMDVIAEGVESE 887 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q LL + G QGYL +P P+ Sbjct: 888 VQLGLLKQCGCSRFQGYLFSKPVPVE 913 >UniRef50_B4RTU5 Sensory box protein n=2 Tax=Alteromonadales RepID=B4RTU5_ALTMD Length = 1510 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 103/542 (19%), Positives = 192/542 (35%), Gaps = 20/542 (3%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + + + V + + G + Sbjct: 949 EAEEQLNLFKRSIENISEGVFITNTQFKFISVNNAYCRYTGETREQALASYMHFHLYPDA 1008 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEW 317 + + T + ++ Y + + + + + + Sbjct: 1009 FTEEIKKTLKTKSNWSGEVESVRVNGERYEMELNIDAVHDEDGKISHFVGVFSDITSRKS 1068 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQA----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 + A DPLT LPN + + + A S CL +DN + ++ G Sbjct: 1069 TEKELLKLANVDPLTELPNRSFFQASHQNLVRKAAQHSLLCLDMDNFKKINDSLGHQTGD 1128 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNN 430 I+ I + L + +N Y+L G E +++ + H L SR N Sbjct: 1129 ILIKQIAKRLQRITGKNATCYRLGGDEFSILMEDNADIHTVTHYAQNLLDTLSRPFIINK 1188 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 +G F + E+ Q +L + + + ++ +Q+ Sbjct: 1189 QEFVLGASIGIAFFPDDGESPQEMLKNADTAMYFAKNNGGN-SYQFFSGEMNQNAVRQLQ 1247 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + N IR + +Y QP + + + ++ GI++P +F+PL Q Sbjct: 1248 IENLIRQGIKDDLFTVYYQPKVDIASGKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQ 1307 Query: 548 SARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 QVL R +VN+ ++ RI ++ +SP Sbjct: 1308 IIEIGEQVLRKACADTKRWVNQGLFSGRVAVNISAKQFELPDLDDRINKILSDVGLSPLH 1367 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + EITE + E+ + + +L + G +A+DDFGTGY++ LKR + +KID F Sbjct: 1368 LECEITEGTLMESPENGLQMMTRLRERGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAF 1427 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + DI + +D + +I ++A L VVAE VE + Q +L + + LQG+L RP Sbjct: 1428 IDDIAKSNVDRHMAAAIINIAHNLGLKVVAEGVEEESQLDILRRYDCEMLQGFLYSRPLN 1487 Query: 727 LA 728 Sbjct: 1488 AE 1489 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 100/528 (18%), Positives = 197/528 (37%), Gaps = 32/528 (6%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 S L + +N+ + V L +N + + + Sbjct: 49 IYQSPALAKVLGYTQNEIKGLNSFQLIHPNELHTVRNLFDDLVN-----NKISKVTKEMR 103 Query: 281 FLQGVETEYSLAFILA--VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + ++ R + H D LT LPN Sbjct: 104 LRHADGSWIFCEVTATNHLFDKKIKGIIVNYRDITERKLYEEEIHQLVYHDNLTGLPNQY 163 Query: 339 ALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L+ E E + + +D + ++ G + ++ + + L+ ++ ++ Sbjct: 164 MLDSFLESEIYKAKYECTRLALLIIDLDRFKVINDSIGHTIGDQLLKEVGKRLVSIVSKS 223 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + L + G E ++VL + + L+ + NI+ + + + F + Sbjct: 224 DLLVRKGGDEFVIVLPSIKKDQVLKVVDNIINLLTSPFKIKSYDIFTSPSIGVSIFPEDG 283 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREE-----MVSGQTTKQVLLLNTIRTALDQGD 503 +T L + Q+ ++ + +R A++Q Sbjct: 284 KTKDLLYKHAEFAMYQAKKSG-NGQYHFFSSAEFNGDMNP-----YTIEVELRKAIEQKQ 337 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L+ QP N E G + ++ G+++P F+P+ L VLE Sbjct: 338 FTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSGLIVPIGNWVLEEAC 397 Query: 561 KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 K SVNL P N+A I + P + +EITE ++ Sbjct: 398 KQNKIWQVSGMSCVVSVNLSPKQFAHTNLASVIKNTLFNTGLDPHLLEIEITESMT-ADI 456 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 ++ +E++ K G +++IDDFGTG+++ LK+ + +KID FV ++ N + IV Sbjct: 457 TRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSFVSELHNNPDEETIV 516 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++I +A+ +L+VVAE +ET++Q A L + QG+L +P P + Sbjct: 517 KTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLPPS 564 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 9/135 (6%), Positives = 35/135 (25%), Gaps = 11/135 (8%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG--YLVPVFFIIFTLGVGK 257 ++ E++ ++ + +LLL + + + Y+ P + + + Sbjct: 711 RKKAEDALQKSEEKYRLIAENMSDLILLLNVEGRVKYVSPSHKKYIGPKYENLLGKLSFE 770 Query: 258 LRYPFLNLTWAVSTLCLLNY------NQNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 +P + + + ++ + +I ++ + Sbjct: 771 YCHPEDIMKLKENLVVIMQSKETSQVEFRCWDETRNWRIIEATGTPIIGKDGYVEHIVVV 830 Query: 309 VRIYHRSEWLNRRWH 323 R Sbjct: 831 GRDITEKRKTEELLQ 845 >UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BNY2_9PROT Length = 744 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 108/579 (18%), Positives = 225/579 (38%), Gaps = 54/579 (9%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE--NDFIAGYLVP 245 R I + Q+ + + + + +S L T + + + Y Sbjct: 174 RDITNIQEMQLKYSQQVQIIEQIHD--------SVISTDLNGYITSWNKGSQILLEYTEE 225 Query: 246 VFFI--IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + +L + + T + + ++ ++ ++ L++L Sbjct: 226 EMLTKHVSSLFLEEDHKALQEGTQELIKHGEYHADKRLVKKSGDIIFVSLSLSILKDEKG 285 Query: 304 C---LLYMVRIYHRSEWLNRRW-------HLQALTDPLTLLPNFRALEQAPEQEAG---- 349 L+ + + + + H QA D LT LPN + EQ Sbjct: 286 NPTALVGYCQDITKRKEAEEKLYEQKNILHYQAHHDELTQLPNRTFFNERLEQAIEKAKR 345 Query: 350 ----KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D+ + ++ G + ++ L +++ + L +L G E L++ Sbjct: 346 NKTLIALFYIDLDHFKQINDSLGHEVGDIVLKITAERLKNKIRKEDTLSRLGGDEFTLII 405 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGR--------FDGNQETLQPL 454 + + + + I+ + L + + + L Sbjct: 406 EELNIAKDVSLLAQKIIEDLEKPIYIDTHTLY--------ISSSIGISIYPDDDTDAKNL 457 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L ++ ++ + V + ++R AL + ++Y QP + Sbjct: 458 LKYADSAMYKAKEEGRN-NFQFYSSEMTELAFEHVAMEASLRQALQNEEFVVYYQPQMDG 516 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + ++ G++ P KF+P+ + L + D V++S + D Sbjct: 517 RTDRLVGMEALVRWNHPTLGLVQPYKFIPIAEKNGLIVQIDQWVMKSAMTQFVAWYKDGL 576 Query: 572 GPRF-SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 P ++NL L +K+ + L K P+ + LE+TE Q +N + ++ ++Q+ Sbjct: 577 NPGVLAMNLAVKQLQKKDFIDTMSNLLKSTQCKPEWIELEVTESQIMTNPQEAIKILKQI 636 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G +A+DDFGTGY++ LKRL D +KID F++D+ + D I +S+ L+K+ Sbjct: 637 SEMGIELAVDDFGTGYSSLSYLKRLPIDKLKIDRTFIQDLPDDEEDVGITKSVIALSKSL 696 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L V+AE VET +Q+ L + G Q +QGYL +P + Sbjct: 697 NLKVIAEGVETDEQKNFLVENGCQNIQGYLYSKPITANE 735 >UniRef50_Q483V3 Sensory box/GGDEF/EAL domain protein n=5 Tax=Alteromonadales RepID=Q483V3_COLP3 Length = 692 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 104/554 (18%), Positives = 203/554 (36%), Gaps = 26/554 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT----PYENDFIAGYLVPVFFII-- 250 + + +L KE T+ L+ + + D Y+ P FI Sbjct: 131 LADVKHAQSQALFKEHMLETIFNAIPDLFFLMEVDGMIVDYHTGDQKNLYVAPHQFIGKR 190 Query: 251 --FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM 308 L + ++ + ++ + ++ L ++ + Sbjct: 191 MTDLLPQEVVSKFQTHVDKILQQEGMITFEYELTMPHG-LVHFEARMSYLP-EYNQIVLI 248 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNL 360 +R QA D LT LPN + L +D+ Sbjct: 249 IRDISEQYKSAEIIRHQAYFDTLTSLPNRFLALDRLSQMLTEAERNNEKIAVLFLDLDDF 308 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + L +++E + + +L G E +++L G + Sbjct: 309 KKINDSLGHEIGDKVLIQSAHRLKQVLREGDTVGRLGGDEFIVLLRGVTENHDALVITEN 368 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L + L + N LL ++ Sbjct: 369 LLKSFREPFVIDGRELMLTLSIGVAISPENGRCASDLLRNADTAMYKAKDLGRN-TYSFF 427 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + ++ ++ + + AL++ + LY QP + ++ G + +L G +T Sbjct: 428 SKKMNTMMLRRFEVEEQMHGALERNEFELYYQPQFDVKKQKITGVEALLRWHNSVLGNVT 487 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRI 593 PD+F+P+ L V++ L +L ++ +VNL P + G I Sbjct: 488 PDEFIPIAEHTGLIIPIGRFVIKQALGFLNKWQNIHQQKFTMAVNLSPCQFRDSTLLGFI 547 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ + + LEITE S + ++ + G ++++DDFGTGY++ L+ Sbjct: 548 KDSLSETNVIAEHLELEITEGVLMSGQSHIHDALVEISELGIKLSMDDFGTGYSSLSYLR 607 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D++KID F++ I N D +V +I +A + L+VVAE VET++Q LL +LG Sbjct: 608 QYAFDVLKIDQSFIRGIPLNKADCELVNTIIAMAHSLGLTVVAEGVETKEQLTLLEELGC 667 Query: 714 QYLQGYLIGRPQPL 727 +QGY +P P Sbjct: 668 DLVQGYYFSKPIPA 681 >UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=Bradyrhizobiaceae RepID=Q20XI9_RHOPB Length = 915 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 109/615 (17%), Positives = 205/615 (33%), Gaps = 35/615 (5%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + + DFPL + + ++ V + + ++ + Sbjct: 285 LVASHALTDFPLLMVVTTTVSSSLADWYRQTRFLIIVAAGSTMIIAAILFLIIRQLTRQH 344 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTL- 253 R ++R T +LL L+ + G V +L Sbjct: 345 -RATQRQLTRDKQRLSTAINNMTQGLLLFDSSARLVVCNQRYMEMYGLSAEVVKPGCSLR 403 Query: 254 -------GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 G + + +A A + Sbjct: 404 QILAERKAAGSFEGDIDAYCADTLSHVAARNVTVAVTPDGRSIQIATEPAP----EGGWV 459 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------QEAGKSFCCLRIDN 359 R A D LT LPN + + E + + + ID Sbjct: 460 ATHEDITDRRRSEERIAYLAHYDELTSLPNRTSFRERIEDEFERVARGGTLALLYIDIDE 519 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ + L ++E + + +L G E ++ + P + +V Sbjct: 520 FKAINDSLGHPVGDALLKIVAARLKACLRETDFVARLGGDEFAILQTAPRDVQEVTELVA 579 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + + L+ Q+ A Sbjct: 580 RLFETIRAPCECLGHQISTDASIGIALAPPHGTDTDQLIKNADLAMYQAKADGR-RTCRF 638 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 E + ++ L +R A+ +Y QPI N + G + +L G++ Sbjct: 639 FEPRMEASAKERRTLELELRKAIADCAFEIYYQPIVELRNGDVIGCEALLRWRHPQRGMI 698 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 +P KF+P+ L VL + A P + +VN+ P+ + + ++ Sbjct: 699 SPAKFIPVAEATGLINELGEWVLRTACAEAANWPAE---MSVAVNVSPVQFKSRTLPLKV 755 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + LEITE + E+++ + +L G RIA+DDFGTGY++ L+ Sbjct: 756 AAALAASGLPASRLELEITEAVLIDDDETALSVLHELKTLGVRIALDDFGTGYSSLSYLQ 815 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D IKID F+ I + IV+++ ++A A+ ++ AE VET +Q+ LL LG Sbjct: 816 RFPFDKIKIDRCFIDGIARPDGASAIVQAVVNIATARHMTTTAEGVETAEQRDLLRGLGC 875 Query: 714 QYLQGYLIGRPQPLA 728 ++QGYL Sbjct: 876 THMQGYLFSPAIAPD 890 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 108/569 (18%), Positives = 203/569 (35%), Gaps = 25/569 (4%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + +M + + A E + L L Sbjct: 231 IGRLALQMDKMRADLKTSFAEQRAILTNIE--LGVIFERGGLIQLASRQAERSFGHPPGF 288 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 I+ + + + +++ + L Sbjct: 289 MSGLPILAIYPEDARAGIASARAMAAIATGDGRHEEELMLHRRDGSQFWAHLRVRQLDPA 348 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 ++++ + + + A DPLT LPN R L + Sbjct: 349 QPQAGCIWVIEDISARKAVEDEVNRLAFYDPLTQLPNRRLLRDRLAQALAASARSGMHGA 408 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET- 410 + +DN + ++ G ++ + + L ++E++ + +L G E ++++ Sbjct: 409 LIFIDLDNFKSLNDTLGHARGDQLLKLVGQRLTHCVRESDTVARLGGDEFVVIVQDLGAR 468 Query: 411 ----EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + + + F +++++ LL + Sbjct: 469 LDECATQAEGVGEKILDALNQPYPLDGHVRHSTPSIGITLFADDRDSVDDLLKEADMAMY 528 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDE 521 Q+ L + + ++ L +R ++ LL+ QP + G + Sbjct: 529 QAKTAGRN-TLRFFDADMQAMLVQRAALEEDMRESMRLSHFLLHYQPQVVGSGRITGAEV 587 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNL 579 +L G++ P +F+PL NL VLE+ K LA D K SVN+ Sbjct: 588 LLRWPHPLRGLVPPAEFIPLAEDTNLITALGHWVLETACKTLADWSAQDDMKHLSVSVNV 647 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q + ++ + +R P + LE+TE + E + + L G ++ Sbjct: 648 SARQFRQPHFVAEVMSILERTGADPHLLKLELTESLLVEDVEDIVAKMSALKSRGVGFSL 707 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL D +KID FV+DI+T+ D I R + LA + L+V+AE V Sbjct: 708 DDFGTGYSSLAHLKRLPLDQLKIDQSFVRDILTDPNDLAIGRMVVALADSLGLTVIAEGV 767 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E Q+ LL ++G QGYL RP P Sbjct: 768 ELAAQRELLAQIGCDAYQGYLFSRPLPRE 796 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 105/576 (18%), Positives = 210/576 (36%), Gaps = 23/576 (3%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS--WLAALS 224 +++ A + + R I H A+ + A + Sbjct: 207 YRVIAWSAATAERESVICAVGRDISQEHAARRGLFQAAAVFKNSGEGILISDKDGRIRDV 266 Query: 225 VLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 T Y + G + + ++ + + + Sbjct: 267 NAAFSRITGYSREDAIGQPTSLLR-----SGRHDGDFYADMWQTLQRDGVWRGEIWNRRK 321 Query: 285 VETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 T + ++ + + + + + + A DPLT LPN + + Sbjct: 322 SGTVFPELLTISKIDGPDGGFMAIFTDISQLKETEEQLQKLAHYDPLTNLPNRFLVNECL 381 Query: 345 EQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 E + L ID+ + ++ G +++ L L+++++ + ++ Sbjct: 382 EHSIRRAQRRSDHLAVFFLDIDSFKNINDSLGHFAGDKLLKTTANRLKALLRDDDSVGRI 441 Query: 397 PGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E L+VL T H+ + + + + + + + +T + Sbjct: 442 GGDEFLMVLDDISTPDDATHIAEKIIGALRKPMILEGRSISVSASIGISIYPEDGQTAET 501 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L+ + E ++ Q + VL+ + +R A+ + + L QP N Sbjct: 502 LMSNADAAMYNAKDQGRD-TFRFYSEHLTRQAFQNVLIDSALREAVSRQEFRLAFQPQVN 560 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 G + +L G ++P +F+P + L VLE + + Sbjct: 561 TDNGSLLGLEVLLRWHHLTLGTVSPSQFIPQAERTGLIRDIGHWVLEQSCLQGSRWIAEG 620 Query: 571 KGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ ++ ++ ++ P+ + LE+TE + E + N+ + Sbjct: 621 LQFGHLAVNVSAPQFRAEDFVAQVRKVLADTEFPPEKLELELTESVLVHDTEKLIENMHE 680 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G AIDDFGTGY++ LKR+ D +K+D FV IV++ D +I ++ L KA Sbjct: 681 LRALGVMFAIDDFGTGYSSLSYLKRMPIDRLKLDKSFVDHIVSDDSDRIIAGAVLALGKA 740 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 L V+AE +E + Q +L LG ++ QGYL GRP Sbjct: 741 MGLPVIAEGIEQEAQARVLQSLGCKHFQGYLYGRPM 776 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 103/571 (18%), Positives = 199/571 (34%), Gaps = 29/571 (5%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 F R I + + + L ++ I Sbjct: 86 PAFVICVRDITERKTSDLGLHLADTVFDSTREG------LMVTDSAQRIVRINPAFSEIT 139 Query: 241 GYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 GY + + +++ + Y + V Sbjct: 140 GYSAADVLDQTPALLRSGRHDSAFYAAMWDSINVSGHWQGEVWNRRKNSEIYPQLISIDV 199 Query: 298 LISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------- 347 + + + ++ + A DPLT LPN L + Sbjct: 200 IRDHTGRVCNYVAVLTDLSKLRSSQLELDFLAHHDPLTRLPNRLLLLSRLQHGIELAQRD 259 Query: 348 -AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + L +D + ++ +G ++ ++ + L+ ++ + + + G E +++ Sbjct: 260 GTHLALLMLDLDRFKDINDSFGHLVGDELLQLVATRLVKQVRTIDTVGRFGGDEFSVLME 319 Query: 407 GPETEGRLQHMVN---ILNSRQIHWN-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + N + S + + +G + N T + +L Q Sbjct: 320 DVAGAEQAARVANDIIRVLSEPYGLSSGVEVRIGASVGISIYPDNGLTPELMLQQADSAL 379 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 Q+ E ++ ++ + +R A+ QG+L +Y QP + G Sbjct: 380 YQAKIEGRGR-FAYFSESLTQAARARIDIEVRLRRAITQGELRVYYQPQVDIPSGRIVGA 438 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVN 578 + ++ G++ P +F+ + L D VL + +VN Sbjct: 439 EALVRWQCPIEGLVPPARFITIAEATGLIGEIDDWVLRETCQQGQRWRAAGLPTLTLAVN 498 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L LQ +I+ + ++ + + LE+TE ++ +++L G R+A Sbjct: 499 LSAYQFLQGDISQTVAQVLRDTGYPAAFLELELTESALMQREAQAIQMLDRLKALGVRLA 558 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LK D++KID F+ DI + D IV +I +A + L V+AE Sbjct: 559 IDDFGTGYSSLAYLKLFPLDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEG 618 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VE ++Q A L G QGYL RP P A+ Sbjct: 619 VENKEQLAYLQTQGCDQFQGYLTSRPVPAAE 649 >UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=Q1LBF7_RALME Length = 839 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 102/565 (18%), Positives = 197/565 (34%), Gaps = 27/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLV 244 + A + S + A + V++ L + GY + Sbjct: 259 VHELRTALHERDEALRRSNYHLRLADRVFESTLDGVMVTDLNGVIEQVNPAFTQLTGYTL 318 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--- 298 + + + + + Y ++ + Sbjct: 319 DEAIGRTPRMLSSGRQGPSFYQEMWSQLRAQGHWKGEIWNRRKNGELYLEHLSVSSICNQ 378 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------K 350 + R + A+ DPLT LPN + +Q Sbjct: 379 AGECTHYAAIFSDITHRRIAEERLNHLAMHDPLTDLPNRTLFSERLKQAIIRARRASRRV 438 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +D + ++ G +R I L ++E++ + +L G E +V+ E Sbjct: 439 GVLFLDLDRFKMINDTMGHGTGDDALRVIAMRLKHAVRESDTVARLGGDEFTIVVEEIED 498 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + H+ +L + I + + + + Q LL Q ++ Sbjct: 499 IRHVAHIAQVLLDVVGQPIDAAGRSVFVTPSIGISIYPDDGTDQQQLLMQADRAMYEAKQ 558 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 ++ + + L +R AL + + L+ QPI + + +L Sbjct: 559 EGKN-TFRFFATQMTSSAMESMALECELRRALTRREFRLHYQPIYDLGSGRIVSVEALLR 617 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 G+++P F+ + + L VL + A R SVNL Sbjct: 618 WQHPTRGLLSPGAFIDVAEESALVVPIGAWVLREACRQGAAWLRSGFEFGRMSVNLSARQ 677 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + ++ + + + P+ + LE+ E A + + + +L + G +AIDDFG Sbjct: 678 IRHEHFLHDVSDVLSDAGMQPEHLQLELVESMAMTGNGVTELVLGELARRGVGLAIDDFG 737 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY+++ L+ L D +K+D F+ ++ D I+R+I +A+A L+VVAE VE Sbjct: 738 TGYSSFTYLQTLPVDTVKVDRSFLTAVIERERDGAILRAIVAMARALGLTVVAEGVENIA 797 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q L ++G QG+L+ RP P Sbjct: 798 QLQFLREIGCDRAQGFLLARPGPAE 822 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 117/592 (19%), Positives = 209/592 (35%), Gaps = 39/592 (6%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQI------LWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 ++ L R+ P + E+ + + V + Sbjct: 445 GSEVWVDLMVSPLRLEGQPEHHLAVVQDISKRKHMEQVLRQSEEPLRNILNHMPVGVNQV 504 Query: 229 LLC--TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + + +L P + Sbjct: 505 QDGKIVFRNDRHVQICGYDIREAPDVDTWWRLVMPDAHQREHAREAWHAACTAALKNPDG 564 Query: 287 TEYSLAFILAVLISFSVCL-----------LYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 ++ ++ + + + + + A DPLT LP Sbjct: 565 AIRTVECVITAKSGVRRAVELSGMILGDSHIVTMVDQSQRKAAEEEVRYLAYNDPLTGLP 624 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R L + + L +DN + ++ G M +R + R L + Sbjct: 625 NRRLLLDRLEQALAMSARHQLCGAVMMLDLDNFKTINETQGPDMGDRLLREVARRLRDCV 684 Query: 388 QENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGA 439 E+E L + G E ++VL E R + M + + + Sbjct: 685 PEDETLARHGGDEFVVVLKDLGADPQEAANRAEEMGQTILAAIRAPFDIDGQQHHTALSV 744 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F G +E+ LL + ++ A L + + +++ L +R L Sbjct: 745 GIAIFRGVRESADELLKRSDLAMYEAKAAGRD-TLRFFDPQMQAAVSERAALEADLRAGL 803 Query: 500 DQGDLLLYAQPIRN-KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 D G L L+ QP + G + ++ D G ++P +F+PL + L R V+ S Sbjct: 804 DAGQLELFYQPKVDQGRITGAEALVRWRHPDRGFISPAEFIPLAEESGLILRVGEWVMRS 863 Query: 559 LLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 LA +VN+ P + + +++ + + LE+TE Sbjct: 864 ACAQLAQWSAHPVLGELTVAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEGML 923 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + E ++ + QL +G ++DDFGTGY++ LKRL +KID FV+D++T+ D Sbjct: 924 LQDVEDTIAKMVQLRGYGVGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPND 983 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A+I R+I L + L VVAE VET+ Q+A L + G QGYL+ P A Sbjct: 984 AVIARTIVALGTSLGLRVVAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAA 1035 >UniRef50_C8WTB0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTB0_ALIAD Length = 799 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 127/757 (16%), Positives = 256/757 (33%), Gaps = 41/757 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL----- 56 V + I I+++ F + L+ ++ A++ S +F P + + Sbjct: 46 VVLGGVAMGIGIWSMHFVAMLALMLPAQMTYNWAVVALSLVFAMAGPGAALYVVARSASP 105 Query: 57 --FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY 114 +G + + M T + + G V+ A L +R Sbjct: 106 VKLAYGALLMGAGIVFMHYTGMAAMTVEGGGFYYRAGPFVLSVVIAIVASYVALWLSFRL 165 Query: 115 GLTSRYVWQRL-FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 ++ Q LV I I Y F L + ++++F Sbjct: 166 ATARGWLAQAAKVACALVMGIAIAGMHYTGMWATVFVLPAHRRAAPMAYSGPLALVVAVF 225 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT- 232 +A ++ + + + D ++R +L + ++ L Sbjct: 226 SAFILLAAIATVML---------DRRLQADRRRLRLADERFRSLYTHHSDAIFTLDTRGA 276 Query: 233 -----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 P + + + + F + + P + + + + L+ + Sbjct: 277 IVDQNPRAKELVPEHELRKSARAFARMIDRRDRPRVFKDYRRALGGSTTNGEFLLRAGDR 336 Query: 288 EYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 ++ + + + R + R + A D LT L N R E Sbjct: 337 ALHMSATHIPIVLDDEIEGVFLVARDVTAEKVAAERMNYLAFHDTLTQLANRRHFEARVD 396 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + +D + ++ G ++ I R L + E+ + ++ G Sbjct: 397 DFIRDARPGDEMQILFVDLDRFKSVNDTLGHEFGDKLLQEIARILKEVAGEDALVARMGG 456 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E + L + R + + + + + + L M F + T LL Sbjct: 457 DEFTITLFR-QPMERAVAVADAILNRLRKPVRVEDRPLYMTASVGIASFPRHGVTRDMLL 515 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE 515 + A EE + ++ L +RTA +GD ++ QP + Sbjct: 516 RHADLAMYTAKAEGR-STYRLFEERTAANAKSRLELEQELRTAAQRGDFEIHYQPKIDMR 574 Query: 516 ---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 G + +L + G + P +F+P+ + L A L + + + Sbjct: 575 QKAVVGVEALLRWRRATGEYVPPCEFIPIAEETGLIAPIGEWCLRAACRQAKAWLDAGRP 634 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VNL P +L + + + + +E+TE +AE + + Sbjct: 635 LSVAVNLSPYQVLTDGFLDVVREVLDETGLPAHYLEIEVTESAMM-DAERAERFLAGCQA 693 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +++DDFGTGY++ RL L +++KID F + V +V SI D+A + Sbjct: 694 LGIEVSLDDFGTGYSSLSRLTHLPLNVVKIDRAFTQRAVDGGRARALVASIVDIAHNLGM 753 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET++Q +++ LG QG+ RP P +D Sbjct: 754 RCVAEGVETKEQLSVIEALGCDEAQGFYFARPVPPSD 790 >UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodocyclaceae RepID=Q47C60_DECAR Length = 714 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 113/566 (19%), Positives = 199/566 (35%), Gaps = 28/566 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAG 241 +++ + E R ++ + + + L + G Sbjct: 136 RQVLEGYLEDITDRVQAQIQLTETELRYRSIFENSVVGMFQSTESGRYLAANPALARLYG 195 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL-----NYNQNFLQGVETEYSLAFILA 296 Y P I + Y L N+ + +A Sbjct: 196 YSTPEALISSLADIASGLYVDPQRREDFKQLIQRDGRVTNFESEITCRDGSRIWIAEHAH 255 Query: 297 VLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------ 347 + S L V QA DPLT LPN LE Q Sbjct: 256 AVRSADGSFLYYEGTVEDITERHRYQSVLQHQATHDPLTGLPNRNLLEDRLAQAVQLARR 315 Query: 348 --AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + + +DN + ++ G + I L ++ + + + G E +L+L Sbjct: 316 KSSKVALAFVDLDNFKVINDSLGHAAGDQLLIEISSRLRAALRGLDTVARYGGDEFVLIL 375 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + H++ + + GL + F + + L LL Sbjct: 376 GEQTSMADTMHLLERVLVSIQAPLALEGHGLRINCSIGVSVFPDDAQDLDGLLRVADVAM 435 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYD 520 + ++ + L + +A++ +L + QP + E G++ Sbjct: 436 YHAKESGKGQ-YCFYTRDLNQAAQDRFSLETALGSAIENNELTVVYQPKVDGEGMVRGFE 494 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNL 579 ++ G++TPD+F+PL + QVL + + A P D + +VNL Sbjct: 495 ALVRWNSAGRGLVTPDRFIPLAEETGQILAIGEQVLYAACRTAANWPLIDGQALSVAVNL 554 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L + + G + + P+ + LE+TE + E ++ ++ + G RIA+ Sbjct: 555 SARQLREPGLPGLVADALAVSGLPPECLELEVTESMIMGDMEHNIRVLKSIKALGVRIAV 614 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L+RL D +KID FV I +I L K L +VAE V Sbjct: 615 DDFGTGYSSLAYLQRLPIDTLKIDRSFVSGCNRGGKAMAIPHAIIFLGKTLDLHIVAEGV 674 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQ 725 ET +++A+L G QGYL RP Sbjct: 675 ETDEERAILAVCGCNEFQGYLFSRPL 700 >UniRef50_Q220B0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B0_RHOFD Length = 701 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 115/697 (16%), Positives = 234/697 (33%), Gaps = 47/697 (6%) Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 G C N + + V +V ++ + L + + Sbjct: 5 GSLCANKGRILVVEDEMIVARDIAQQLVALGYQVVGHATRGQEAIDLAGALQPELVLMDI 64 Query: 130 LVTPI--GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 + GI + + F + I+ F D + +L + Sbjct: 65 QLAGAMDGIAAAQAIRLQFLLPVVFITAFAADEVLARAKLTEPF-------GYILKPFSE 117 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV--------------LLLLLCTP 233 R + + + + + + + + V + L Sbjct: 118 RELRTVLEMALYKHQADSQARDAARHTQAILDGMVDGVITLNAQGLITSINQAVSTLFGY 177 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + + + + G Y + + + + + ++ Sbjct: 178 APEELLGHNVAMLMPSPHRSLHG--GYLRRHQHTGAGCAMGQGREVDGQRRDGSVFPISV 235 Query: 294 ILA-VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 ++ ++ + + +V + + A D LT LPN R L Sbjct: 236 SVSELMHNGQTQFIGLVHDITQRRRSEENIYRLAFYDKLTGLPNRRLLMDRLKQALITST 295 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D+ + ++ +GL ++ + + L +++++ + + G E +++ Sbjct: 296 RTGQHGALILLDLDHFKQINETFGLDAGDELLQQVGQRLPTCVRDDDTVSRFGGDEFMVM 355 Query: 405 LSGPETE-----GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 L ++ + + + + ++ F Q +L LL Sbjct: 356 LEALSSQPQEAAIQAEAIAQKILLALAQPYRLRGHTHGTTPSIGVVMFRQAQVSLDDLLK 415 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG 516 Q+ A + + + + L +R L + +L+ Q + +G Sbjct: 416 MTDVAMYQAKAAGRN-TVRFFDPALQALALARTALEENLRRGLALQEFVLHYQIQVDHQG 474 Query: 517 --EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKG 572 G + +L G++ P +F+PL + VLES + L Sbjct: 475 LPTGAEALLRWQHPVRGMVPPAQFIPLAEETGFILPLGQWVLESACRQLVAWSHQRATGS 534 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VN+ L Q + + + +P + LE+TE + + + + L Sbjct: 535 WTLAVNVSALQFAQPDFVAHVTSALQATSANPTLLKLELTESMLVGDVQDVITKMNALKA 594 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G A+DDFGTGY++ LKRL D +KID FV+D++ N DA+I ++I L L Sbjct: 595 QGVSFALDDFGTGYSSLSYLKRLPLDQLKIDQSFVRDLLINPNDAVIAQTIVALGHNLGL 654 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET Q L +G QGY GRP P A+ Sbjct: 655 QVIAEGVETVGQHDYLASIGCDAFQGYYFGRPVPAAE 691 >UniRef50_A1U2T3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Marinobacter RepID=A1U2T3_MARAV Length = 725 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 108/577 (18%), Positives = 196/577 (33%), Gaps = 42/577 (7%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVF- 247 + E + + V + + + + + GY Sbjct: 134 QSLIRAHEMVQSRLEKSEALHRYIVNSSPDIVFMLDETGHICFINNKVESLLGYQPSELC 193 Query: 248 -----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--- 299 I+ V + Y + +L + + Sbjct: 194 GQHFRHILDDRDVARGTYALQGPNISADNPRVLEVRLKTRGSRKATRHFEITAFPVDPQT 253 Query: 300 ------------SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 + R + + QA D LT LPN + Sbjct: 254 WPQTGKTQGGCTGQPARYYGIARDVTERKEAEAFINFQAYHDLLTRLPNRALFKDRLELA 313 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + L +D + ++ G M ++++ L ++ + L + G Sbjct: 314 ITHARRSQQKLAVMFLDLDRFKVVNDTLGHAMGDRLLQAVTHRLEKCLRRGDTLSRFGGD 373 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L+L +++ L + + +G F ET+ L+ Sbjct: 374 EFTLLLPSIHGHDDARNIARKLIHALKAPFQLGDHEVFVGVSIGISVFPEAGETMDLLIQ 433 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---N 513 A + +S T ++ L +R AL++ +L ++ QP + Sbjct: 434 NADIAMYHVKARGKD-GYRFYSDSMSINTANRLSLERDLRLALERNELRVFYQPQVCSRS 492 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 G + ++ + G++ P FLPL + L + QV++ + + Sbjct: 493 NRVVGLEALVRWQHPERGLLYPGDFLPLAEETRLVGKLSEQVIDQACRDVGRWISSGHSD 552 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VNL P + ++ ++ + +EITE ++ E +++L Sbjct: 553 LRLAVNLSPSQVEHPRFVETLMNRVAAHNFPADNLEIEITENVIMNDLEQISRKLKELAA 612 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G RIAIDDFGTGY++ L RL +K+D FVK I + A IV +I +A L Sbjct: 613 TGVRIAIDDFGTGYSSLNYLHRLPIHTLKVDQSFVKAIRSGEDGACIVNAIIAMAHGLKL 672 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +VAE VET Q A L LG +QG+ G +P AD Sbjct: 673 EIVAEGVETDDQLAYLKSLGCHQVQGFFYGPARPAAD 709 >UniRef50_D1B584 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B584_SULD5 Length = 961 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 101/597 (16%), Positives = 223/597 (37%), Gaps = 37/597 (6%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 + ++SL LI M+F ++ + + ++ TL +A + Sbjct: 352 LVIISLVIMCLIIVMMFLISVKLRSLLARYENHLLLNNKQIKEQKMVFETLYQKSADGIW 411 Query: 227 LLLLCTPYENDFIAGYLVPV-----FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 LL + + + + + P ++ S ++ Sbjct: 412 LLKEGLFIDCNEAIMKMFKTTDKQKLINVSLADLSPEFQPDGQSSYEKSRWMNSIASKEG 471 Query: 282 LQG--------VETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRR-------WHLQ 325 + T ++ ++ ++ + +R + L Q Sbjct: 472 VHKFEWYAKACDGTLIWISVVMTTVMMNKGKIQHCSIRDITARKALEEENKKQKKLLMHQ 531 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 D LT LPN L+ + +D + ++ G ++ Sbjct: 532 VEHDILTGLPNRNLLQDRLTQAIKKASRDGKVLGVMFVDVDKFKNINDSLGHDAGDMLLK 591 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 +I + + ++E + + +L G E +++L G + + + L + N Sbjct: 592 TIAKRMQHSIRETDTVARLSGDEFIVLLDGCKDVNDIFVAIKKLINAFQEPFIFGNESFK 651 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + + E LL ++ + ++ ++ +T + + + + Sbjct: 652 VTMSIGVSVYPNDGELASKLLKNADIAMYKAKSQGRNR-YIFFDQEMNQETNEHLEVEKS 710 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 + AL + +L+ QP N + G++ +L G+ P F+ + + L Sbjct: 711 LHKALVNQEFVLHYQPQVNLKSGKIIGFEALLRWKHPKRGLTAPGYFIHVAEESELIIEI 770 Query: 552 DLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 V++ +++ L + ++N+ L ++ I++ K P+ + LE Sbjct: 771 GNWVIKEVMRQLKEWHDKGLRPGKVAINIAGKQLESNHLIAFILQNLKESGCRPEWIELE 830 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 I E +A S+ +++ + G I+IDDFGTG+++ LK L +KID FV+++ Sbjct: 831 IVERFIMKDATKSIALLKRFRELGLDISIDDFGTGHSSLAYLKELPITKLKIDQSFVQNL 890 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++ D I R+I +L + L V+AE VET+ Q+ L+H G +QGY+ +P Sbjct: 891 ENSSEDRAIARTIIELGRGLGLVVLAEGVETKAQKELIHSSGCDLIQGYVFSKPVDA 947 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 102/600 (17%), Positives = 208/600 (34%), Gaps = 29/600 (4%) Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 P + A I V + + + + I A+ R Sbjct: 268 PYDLELELVTARGIRKWVRTVCTPHIIDGRVLKLQGSFQDISDRKVAEDKMRLATLVFEN 327 Query: 210 KEKRAFTL---SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + + S + +++ + + + + R + + Sbjct: 328 SSEAIMVVDAESQILSVNPAFTEMTGYTAQEVVGKT------PKILASGKQDRKFYEEMW 381 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + Y+ + + + + + +++ Sbjct: 382 HLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRRVALFSDITKNKQNQEVIW 441 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 QA D LT LPN R L + L +D + ++ YG +M Sbjct: 442 RQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLFLDLDRFKEVNDTYGHLMGDQL 501 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTG 432 ++ LL ++E + + +L G E +++LSG + + +Q + + + +N Sbjct: 502 LQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDKDVVQDIAQSILKKFDTPFQLDNDL 561 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + + L + + + ++ L Sbjct: 562 THVSVSIGITIYPEDGNAGEVLFKNADQAMYVAKNNGRNR-YSYFTASMQAHAQNRMRLS 620 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N + AL LY QPI + + +L G++ PD F+PL + L Sbjct: 621 NDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQHPTRGMIPPDNFIPLAEETGLIV 680 Query: 550 RFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNI-AGRIIRLFKRYHISPQAV 607 V + + + S+N P+ + I + Q++ Sbjct: 681 DIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNETHGHEAWISFLLMNDLPRQSI 740 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 ++EITE ES + G ++A+DDFGTGY++ LK+ D +KID +FV Sbjct: 741 VVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGTGYSSLSYLKKFDIDYLKIDRIFV 800 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +++ N+ D + +I +A + V+AE +ET++Q+ LL ++G + QGYL P P Sbjct: 801 RNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQRELLQQIGCDFGQGYLFSPPLPA 860 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 60/220 (27%), Gaps = 34/220 (15%) Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 ++L + + P+ L D L + +A +I L L +L Sbjct: 3 LFSRKLRYAAIRIPLIYCVFAVLWIMASDQTLAL--LLPEAASITHFQTLKGLLFILLTA 60 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPY 234 +L++ + R L R +L+ A S+LL L+ Sbjct: 61 ALLYHLIHR----------------QQLLAS--RYNSLTVHANDSILLFDHQGKLVDAND 102 Query: 235 ENDFIAGYLVPVFFIIFT-LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + GY I + + + A + + + + +S+ Sbjct: 103 RALRMYGYTRDQMQHIHARQLLPDAASDWRSCFLAEAQHNGIIFESEHKHADGSTFSVEV 162 Query: 294 ILAVLI-SFSVCLLYMVRIYHRS-------EWLNRRWHLQ 325 +L S + +VR + Sbjct: 163 SACLLKIGGSDYIQAIVRDITERLRVVEKLRESEQLLAHM 202 >UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica KT99 RepID=A9D5G8_9GAMM Length = 1066 Score = 648 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 111/568 (19%), Positives = 221/568 (38%), Gaps = 29/568 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLV 244 I + L + + + + K A + ++ +L+ + I GY + Sbjct: 485 IAQLSHSLNLMLEERSKANRQLKLAAAVFESSSEGILVTDADNHIELVNPAFTQITGYSL 544 Query: 245 PVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + R+ + + ++ T + Y + V+ Sbjct: 545 EDVKGRSPSVLNSQQQTRHFYDEMWQSLQTEGKWQGEIWNKRKNGQVYPEYLAITVVKDD 604 Query: 302 SVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGK 350 + ++ + + + + D LT LPN + A E Sbjct: 605 AGQIIQHIGLFLDISNRKQYEQNIWYKTHYDLLTKLPNRSLYTIKVQQEMTMAQENNRQV 664 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D ++ + YG + +R + L L+ +++ + +L G E +++L Sbjct: 665 AILFINLDRFKYTNDIYGHEVGNKLLRQVASRLKSLVNKHDFVARLGGDEFIIILPRIRR 724 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + ++Q + + +N+R + L + F N + + L Q+ Sbjct: 725 QHQVQAIADKVNARLASPFGVDGDDLMISASIGISLFPENGSSEELLTRNAETAMYQAKN 784 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILA 524 ++ +++ L +R A+ + + L+ QPI N + G + ++ Sbjct: 785 DGRN-NYRYYSSEMNEHILERIQLEQRLRQAVIRQEFCLHYQPIVNLDDRTITGVEALIR 843 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G++ PD F+P+ + L VL+ L LA ++N+ L Sbjct: 844 WQDPKFGMIAPDMFIPIAEETGLIEPIGEWVLQQALTDLAHWHRLGFKISMAINVSGRQL 903 Query: 585 LQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L +N + L K+ I PQ + +EITE + E M +E + G I IDD Sbjct: 904 LGQNKTSFKCLLKALLKKNDIEPQYLHIEITESMLMDDTEQCMTVLESIRSLGLDIYIDD 963 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR +IKID F+ +++ + DA ++++I + ++ L +VAE +ET Sbjct: 964 FGTGYSSLSYLKRFPIAVIKIDKSFIDNMLESESDAKLIKAIVMMGQSLELKLVAEGIET 1023 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q +L LG + QGYL P P + Sbjct: 1024 HAQWQMLQALGCDFGQGYLFSHPLPAQE 1051 >UniRef50_Q5ZVT3 Inner membrane protein PLUS sensory box protein LssE n=6 Tax=Legionella pneumophila RepID=Q5ZVT3_LEGPH Length = 792 Score = 648 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 135/750 (18%), Positives = 247/750 (32%), Gaps = 50/750 (6%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHL 81 ++ Q+ IS A+ + W L I+++ + M Sbjct: 30 LLFDQVGMAISGEALTVTILPIALWSVTNHELLIIWMIFTYVFSDLYKSMLLFYYNKQPT 89 Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY 141 F + VV A + T ++ G+ S Sbjct: 90 LFSTEKWLFLFNLGVVSSGLAWG-FASSIMIPASSTLHQIFVVFLITGVTAAANSLYSPV 148 Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF--YYLTRM---------- 189 + F F + V LL + + MLF YY R+ Sbjct: 149 RLSYFLFLVTAFVPFTIWLFSKGQVYLLLGFCGIIYLGIMLFISYYSNRILINTLKMRFK 208 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTL----SWLAALSVLLLLLCTPY---ENDFIAGY 242 I + + + + + +A + ++ L A +L++ L F+ + Sbjct: 209 ISNLNSTKDILEKKVADRTKELEKILALTKSTLESTADGILVVDLKGNIEFCNQQFLKMW 268 Query: 243 LVPVFFIIFTLGVGKLRYPFLNL---------TWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + FI ++Y L + + Sbjct: 269 GIAPGFIDSHNDTETIQYVLNQLKNPEEFLKQIKELYNNPKQESFDELHFKDGKIFERYS 328 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------- 346 L + + ++ R R QA D LT LPN AL + Sbjct: 329 QPHWLDNKIIGRVWSFRDETLR----TRLAYQANHDSLTGLPNRTALYDRLDHAINYCKR 384 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 S L IDN + ++ G + R L ++ ++ + + G E +L+L Sbjct: 385 LNTSLSVLFLDIDNFKLINDSLGHDAGDILLYEFSRRLKGCIRHSDTVARFGGDEFVLLL 444 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + + ++ I + + F + LL Sbjct: 445 M-TTEPKDVILIAQNILKAVAQPIKLPTQEVIVTTSIGISLFPKDGIDASTLLKNSDTAM 503 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 + ++ Q+ K++ + I A+ + + QPI N E G Sbjct: 504 YLAKKEGRN-NFQFYNNSINQQSLKRLEIQTQIHNAIKNNEFFILYQPIYNLRSGELVGA 562 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + ++ G+++PD+F+P+ + L + VL + T SVN Sbjct: 563 EALIRWGHPAIGLLSPDEFIPIAEETGLINQVGEWVLRNACVQNKTWQLMGLPHISISVN 622 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L N + K + PQ + +E TE + + ++ + G ++A Sbjct: 623 VSWRQLKNSNFIEIAESVLKESRLDPQYLEIEFTESTMIQKSTPIDSTLIKISQLGIKMA 682 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY+N LK D +KID F+++ TN DA IV +I +A + L V+AE Sbjct: 683 IDDFGTGYSNLSYLKTFPFDKLKIDRSFIQNCTTNPNDASIVEAIIAMAHSLELKVLAEG 742 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+T + +H+ G +QG+L G P Sbjct: 743 VDTIDKAFFMHQHGCDEVQGFLYGLPVKAD 772 >UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KFD6_9GAMM Length = 643 Score = 648 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 113/635 (17%), Positives = 213/635 (33%), Gaps = 37/635 (5%) Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS-------LFTAVLIYNMLF 183 + + + + + I+ A+ + LL + + L Sbjct: 1 MVAYIAYYLVLVGFTLANNRTYIARLRLSAENQSLMDALLEEASSREEVIASRTSELSLS 60 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 +S + L A + FI Sbjct: 61 NKQLAQQISRRKELERRTQQDLELLNSVINATSDLIFYKDYAANDGRYLGCNESFINFLG 120 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG--VETEYSLAFILA----- 296 II + L A + L + + + + + Sbjct: 121 RASKDIIRQTDRQFFSEKEVKLIHATDHIALKEGSHVVERWMEDPQGHRVLLSIKLSSFN 180 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWH-------LQALTDPLTLLPNFRALEQAPEQEA- 348 ++ + R + A D LT LPN L Sbjct: 181 DTQGNVRGVVGIARDITDQKKTEETLRFQQRSLEHLAHHDALTGLPNRLYLIDKLNHALL 240 Query: 349 -------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + L +D+ + ++ G + +R++ R L +++ + + +L G E Sbjct: 241 SPDLNTASLAVLFLDLDHFKDINDSLGHSLGDEVLRAVSRRLSACVRKADVIARLGGDEF 300 Query: 402 LLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +VL G + + + + ++ L++ G+ T + LL Sbjct: 301 TIVLQGIGSSIIAVEVAQKILKVFQEPLTLSDRTLNVSTSIGISVSPGDGVTTEELLRNA 360 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 ++ ++ + ++ + + + TAL +G+ + QP + E Sbjct: 361 DAAMYRAKRSGRN-TFMHYSPDMTERALARLSMESDMHTALARGEFHVAYQPQVDMRSGE 419 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPR 574 G + ++ G + P++F+P+ + L VLE + R Sbjct: 420 LMGVEALMRWEHSTRGNIPPEEFIPIAEENGLILAMGSWVLEEVCAEQKRLKNAGLSDIR 479 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++VN+ LL + + S + LEITE E + ++ + G Sbjct: 480 YAVNVSGRQLLNPEFLALVEHIVSTKDCSGSQLELEITESVLLHEPELAAKAMQSFREMG 539 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 IAIDDFGTGY++ LK+ + +KID FV+DIV + D I ++I L A L V Sbjct: 540 IAIAIDDFGTGYSSLAYLKQYPLNRLKIDASFVRDIVVDPDDRAIAQTIIALGNALDLEV 599 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET++Q+A+L G QGYL +P AD Sbjct: 600 IAEGVETEEQRAMLVSDGCSLGQGYLFSKPISPAD 634 >UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B3_MARMS Length = 734 Score = 648 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 94/499 (18%), Positives = 189/499 (37%), Gaps = 15/499 (3%) Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL----AFILAVLIS 300 I + N+ + S Y + Sbjct: 218 AELEKIHPEDRQHVMDSVNNILTSKSESNYYKYQARIRHIDGNYRWIGVRCIVTEFDQED 277 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA----LEQAPEQEAGKSFCCLR 356 +L + + + + A D LT LPN A + + + + Sbjct: 278 KPARMLGVRIDIDEIQKAHDQVEWLAHHDSLTKLPNRVALNKTFHKIIKPNTKIALLFID 337 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D+ + ++ G + + ++ + L+ + + G E +++L E ++ Sbjct: 338 LDHFKNVNDTLGHSIGDQLLLTVADRMRTLVNNIGYVARQGGDEFIILLPADNEECLIEK 397 Query: 417 --MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + S + + + + + N E L + + Sbjct: 398 TCAIKEALSARYNIDQHQFFITPSIGVSLYPRNGEDFDTLYQRADAAMYHAKHTGRNR-Y 456 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 E + +T+ + L N + A+++ + L+ QP + + G + ++ + G Sbjct: 457 AFFTEEMQAISTRALTLGNALHDAIERQEFSLHYQPQISLITGKIIGAEALIRWHSLELG 516 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIA 590 ++P +F+PL + VL + L + R +VNL ++ Sbjct: 517 HVSPGEFIPLAEENGQILAIGEWVLRETARQLKQWLEEGITPVRIAVNLSYAQFQVNDLP 576 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + Y + Q + LE+TE A + E ++ +E + G +IDDFGTGY++ Sbjct: 577 SIVEAILNEYAVPAQYLELELTERIATKDPEHTITILESFQQLGIHTSIDDFGTGYSSLS 636 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+R +KID FV+++ TNT D +IV +I LA+ ++ +AE VET+ Q +L+ Sbjct: 637 YLQRFPVYKLKIDQSFVRNMTTNTNDQVIVGTIILLAQQLGMTTIAEGVETKAQLEMLYN 696 Query: 711 LGVQYLQGYLIGRPQPLAD 729 +G +QGY I RP P + Sbjct: 697 IGCDDIQGYYISRPIPAEE 715 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 114/594 (19%), Positives = 220/594 (37%), Gaps = 73/594 (12%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFF 248 F +R + E+ TL + +V + P G + Sbjct: 123 FNIDERKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYVNPALASSFPGGAEKILG 182 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-- 304 G + + +T + + E L S Sbjct: 183 KKPSEIPGGPEFDKFEAKIVEVFATGNNALFELKWQGKDGKELCNHIRLTAERDSSGRLT 242 Query: 305 -LLYMVRIYHRS-------EWLNRRWHL-------QALTDPLTLLPNFRALEQAP----- 344 +L + R + N + QA +DPLT LPN R + Sbjct: 243 SVLAIGRDITELYESRAALKRANAQLENMNDLLQSQATSDPLTGLPNRRFMLDRLKHALA 302 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +DN + ++ G + ++ + L ++E + + +L G E Sbjct: 303 SSSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAHRLETCVREGDTVARLGGDEF 362 Query: 402 LLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 +++L E + + + + + + F+ +Q++L Sbjct: 363 VVMLEDLSEKDLEAAAQTEAVGEKILAALNQPYQLGKHEYRNTPSIGATLFNDHQQSLDE 422 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL Q Q+ AL + + + L N +R AL+ L+ Q + Sbjct: 423 LLKQADIAMYQAKRAGRN-ALRFFDPQMQETINSRATLENELRKALELHQFYLFYQVQVD 481 Query: 514 -------KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 G + ++ + G+++P +F+PL + L L VL++ L T Sbjct: 482 SVQEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAEETGLIVPIGLWVLDTACAQLKTW 541 Query: 567 P--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS------ 618 +G +VN+ Q + ++ +R+ I P+ Sbjct: 542 QHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGIDPKL-----------LKLELTE 590 Query: 619 -----NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N + ++ + L + G R ++DDFGTGY++ + LK+L D +KID F+ D+V++ Sbjct: 591 SLLLENIQDTIATMNALREIGIRFSLDDFGTGYSSLQYLKQLPLDQLKIDQSFICDLVSD 650 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + D IVR+I +A++ +L+V+AE VET+ Q+ +L + G + QGYL +P P+ Sbjct: 651 SSDRAIVRTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHHQGYLFSKPVPI 704 >UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3EBJ4_GEOLS Length = 693 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 99/569 (17%), Positives = 196/569 (34%), Gaps = 48/569 (8%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 +R E+R L + L++ + F + +F I VG Sbjct: 110 ISRHKRAEQALRLSEERYRMLVEHQSD--LVVRVDIEGRLQFASPSFCMLFGIDEEQLVG 167 Query: 257 KLRYPFLNLTWAVSTLCLLN----------YNQNFLQGVETEYSLAFILAVLISFSVCL- 305 + P +N + + + + + + ++ + Sbjct: 168 RELCPIINSSGQAVMKEAMQRLDCHPKSCYHEICSQTLDG-LRWIGWAMKGVVDEKGHIE 226 Query: 306 --LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 + + R + + A D LT LPN L+ Q + L Sbjct: 227 AIVGIGRDITDRKKAEQEILQLAHYDTLTGLPNRSLLQDRLSQALSLANRGNVTLAVLFL 286 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ +G + ++ + R L ++ + + ++ G E +++L+ + Sbjct: 287 DLDRFKHVNDAFGHQIGDLLLQEVSRRLKDCVRATDTVSRIGGDEFVIILTNLIKCSQAG 346 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S R L G + + + LL Q+ A Sbjct: 347 SIAAKIISSMSRLFQLGGHELYSGTSIGIALYPTDGNDVDTLLKHADMAMYQAKASGRG- 405 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + + +++ L +R A++ +L L QP + G + +L Sbjct: 406 TFKFFSPEHNEKMLQRMQLEQALRRAIEHQELSLDYQPQIDSATGSINGLEALLRWQHPQ 465 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN 588 G++ P F+ + + L VL + + R +VN+ P Q+ Sbjct: 466 LGLLLPGLFITIAEETGLIIPLGEWVLRTACRQARAWQRAGYHRLRIAVNISPRQFQQRG 525 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQA--------FSNAESSMYNIEQLHKFGFRIAID 640 + I + + P+ + + + ++ L + G +AID Sbjct: 526 LIPMIDAILQETGCDPR--------GLELELTETTLMDSPKEATALLKALKRRGISLAID 577 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK D +KID FV D+ + D+ IV +I +A L VVAE VE Sbjct: 578 DFGTGYSSLSHLKHFPIDRLKIDRSFVNDLTRSREDSAIVEAIIAMAHRLGLEVVAEGVE 637 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A+L G + QG+L + + Sbjct: 638 HPDQHAILSDWGCKTCQGFLYSKAVSTEE 666 >UniRef50_Q3JAB6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JAB6_NITOC Length = 700 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 113/565 (20%), Positives = 213/565 (37%), Gaps = 28/565 (4%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 V + RR + R ++ V ++ L AG F Sbjct: 127 VERELREANIRRQRQAVENERARLSSILEATPDLVAIMDLEGRIHYMNQAGRQWLGFIKK 186 Query: 251 FTLGVGKL--RYPF-------LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL---AVL 298 L YP A + L E ++ ++ Sbjct: 187 NHYAGASLLAHYPLWTASLIRDTAIPAALREGVWEGEAVILNPSGGEIPVSQVILSHRNA 246 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 ++ L + R + + + D LT LPN L + Sbjct: 247 LNQVEFLSTIARDISERKHYEQELQYRVTHDTLTHLPNRILLRDRLIQVLAHAKRNQRLT 306 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +DN + ++ G + C+R++ L ++E++ L + G E L++LS + Sbjct: 307 AVLFLDVDNFKQINDGLGHLTGDKCLRTLAHHLAGCIRESDTLGRYGGDEFLIILSDLRS 366 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++ ++ + S+ + NN + + + + + + LL + Sbjct: 367 YSDVETLIKKIRATVSQPLKLNNNDVFITLSIGVSLYPQDGDDEEALLKTADAAMHTAKH 426 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 ++ + ++ + L + AL++ + +LY QP + + + ++ Sbjct: 427 SSPGQC-RYYRPEMNVRGSELLALETDLHRALEREEFVLYYQPQLDVTTGQITAVEALIR 485 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G+++P F+PL+ Q L L + + R +VN Sbjct: 486 WQHPNRGLVSPRDFIPLLEQTGLIEEVGKWGLNTACRQAKAWHSQGYPIRMAVNCSARQF 545 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q + + ++ ++ + P + LE+TE + +S+ Y +++L + G +AIDDFGT Sbjct: 546 QQ-HFLDIVHQILQKQSLDPAYLELEVTESVVMQDTQSATYILQRLKEMGVTLAIDDFGT 604 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKR +KID FV+D+ N DA I +I L + L VVAE VET+ Q Sbjct: 605 GYSSLAYLKRFPIHSLKIDCSFVRDVTKNEEDAAIAETILLLGNSLGLEVVAEGVETEAQ 664 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 +QGY IGRP P D Sbjct: 665 MRFFQDRHCHRIQGYWIGRPMPAKD 689 >UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2A5_METFK Length = 722 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 113/572 (19%), Positives = 225/572 (39%), Gaps = 30/572 (5%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV---LLLLLCTPYENDFIAGYL 243 ++ +++ ++ +A ++ L A ++V ++ + I+ Y Sbjct: 143 LVLVTDCTEQELMSQKLMALIKEHDELKIALDAHAIVAVTDARGVITRVNDKFCSISQYG 202 Query: 244 VPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 V +P F +L VS+ + N T Y + + + Sbjct: 203 REELVGSTHRIVNSGHHPKEFFQHLWRTVSSGQVWNGEVCNRAKDGTLYWVHTTIVPFLG 262 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + + + L + AL D LT LPN R + + Sbjct: 263 EDGVPVQYIAIRADITQRKILEQSVQRMALYDDLTGLPNRRLMVERLQMIREACVRSHRH 322 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +DN + ++ +G ++ + + L +++ + + + G E +++L+ + Sbjct: 323 GAVMFLDLDNFKEINDTHGHEQGDRLLKQVGQRLRENIRQVDTVARAGGDEFIILLADLD 382 Query: 410 -----TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + ++ L S +N L F + L Sbjct: 383 EDPAKATAQAYNVAEKLRNALSTPYIFNRIVLHTSTSVGIVMFSDKAKPKTELFKHADMA 442 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGY 519 ++ A + + + + + LL +R AL + + LY QP+ + + G+ Sbjct: 443 LYRAKAQGKNR-ISMFDPSLQAEVLEYASLLADLRQALQRDEFRLYFQPVVNRDGKVIGH 501 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSV 577 + ++ + G++ P +F+P+ Q L VL K L D SV Sbjct: 502 EALIRWIHPVRGMVLPGQFIPVAEQTGLIQEIGQWVLSMACKQLNVWSEDAVKSQWTLSV 561 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ + G++ ++ P+ + LE+TE ++ ++ + L G Sbjct: 562 NVSAKQFRDMDFVGKVHDAIRQSGADPKRLWLELTESMFHTDIVQTIEKMRALQDIGVHF 621 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ LK L D +KID FV+D++ + DA IVR+I LA +L+VVAE Sbjct: 622 SMDDFGTGYSSLSVLKLLPLDQLKIDRSFVRDVIDDPNDAAIVRTILALAGILNLTVVAE 681 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +E+ +Q L + G Q QGY G+P P+ + Sbjct: 682 GIESSEQFDFLEQHGCQAFQGYFFGKPVPMDE 713 >UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J4K1_COMTE Length = 822 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 109/601 (18%), Positives = 215/601 (35%), Gaps = 26/601 (4%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 + D D +F V L+ + L +L L + A+ + Sbjct: 210 AVSFDLEYMRQDGDMLFGQVSLVCRDQSGLQAGLLM--LVTDVTDRKLAETSLHNEKERL 267 Query: 208 LGKEKRAFTLSW------LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + T + G + + G + Sbjct: 268 RITLNSIGDAVIATDAEGRVNFLNPIAEAMTGWYGRRAIGVPIEQVMPLRDSFDGHVLQN 327 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWL 318 + L + + N + A + + L + + + + Sbjct: 328 PIYLALKEQRIVGMALNSQIACRDGRVLEVEDSAAPIWDQAGKLTGAIIVFHDVSEARAM 387 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + A DPLT LPN L+ + L +D+ + ++ G Sbjct: 388 ALKMTHLAHHDPLTNLPNRMLLQDRTSQALQQAGRNGGQVALFILDLDHFKTINDSVGHS 447 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 + + + + L ++ + + + G E ++++ + + L + Sbjct: 448 IGDQLLLQLAKRLQQFVRNGDTISRQGGDEFIILIPEIRHVDEVSQLGERLLEACAEPFL 507 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + D+ + + + + L Q+ + + Sbjct: 508 LDGVRYDLSMSIGISLYPDDADNQEALYRHADAAMYQAKQEGRGR-FRFFSQEIEHTLYA 566 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + +L +R A+ +GD ++ QP + + G + ++ + DG +++P +F+PL + Sbjct: 567 RHMLERHMRVAVAEGDFEVHYQPKIDLASQQVVGAEALVRWRRQDGSLISPAQFIPLAEE 626 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL + +VN+ + L + N + + ++ I P Sbjct: 627 TGLIVPLGRSVLLKACQEGRRWHEQGYLIHIAVNVSAVQLAKSNFTAMVSEIIEQTGIMP 686 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE + +++ I +LHK G I+IDDFGTGY++ LK+ D++KID Sbjct: 687 GYLELEITEGVLAKDVKNTFAIINELHKIGVSISIDDFGTGYSSLSYLKQFPIDVLKIDQ 746 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F ++I+T A IV +I ++A L +VAE VETQ Q LL ++G +QGYL RP Sbjct: 747 SFTREILTEKSSAAIVAAIINMAHGLDLRLVAEGVETQAQAELLQQMGCTVMQGYLYSRP 806 Query: 725 Q 725 Sbjct: 807 L 807 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 647 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 102/553 (18%), Positives = 200/553 (36%), Gaps = 26/553 (4%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSV-LLLLLCTPYENDFIAGYLVPVFF---IIFTL 253 RR + ++ ++ I GY + + Sbjct: 332 TERRRHEKELQQAAVVFDAIREAVIITDDARNIVAVNNAFTDITGYTLDDVYGRNPRLQQ 391 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVR 310 + + +L +++ + Y + V+ + + + Sbjct: 392 SGRHDKTFYRSLWRSITEHGHWQGEIENKRRNGEIYPAWQNINVVYDKNGNVANYVSVFS 451 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEF 362 + ++ A D LT LPN E+A + + + +D + Sbjct: 452 DISVIKEKEKQLRHLANHDSLTGLPNRLLFFNSLENSLERARRRRMEVALMFIDLDRFKI 511 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G ++++ R LL ++ + + +L G E + L L Sbjct: 512 INDTMGHEAGDILLKTVARRLLEAVRGEDMVARLGGDEFTISLEELSNTEDAAAKAGKLI 571 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + +H + F + + Q L ++ H + Sbjct: 572 ETIRQPVHIGGHEIVCSASIGIAIFPHDADNAQNLARAADAAMYRAKELHRN-TFEFYTS 630 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 ++ + + + L + +R AL++ + LY QP N G + +L G++TP Sbjct: 631 ELTERAIEHLTLSSEMRQALERNEFELYYQPQFNLTSGRLVGAETLLRWRHPTRGLITPY 690 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIR 595 F+ + L V+ L + +A R + N+ L ++ GRI Sbjct: 691 CFINIAEDSALIDPIGGWVINQLCRDVAGWLKGGLKLPRIAFNVSSKQLEHYDVKGRIEH 750 Query: 596 LFKRYHISPQAV--ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 +R+ + P + LE+TE + E S+ + Q+ G +AIDDFGTGY++ RLK Sbjct: 751 ALQRWGLEPSDLDLELEVTEGAL-QHEERSVEVLRQVRLLGLSVAIDDFGTGYSSLSRLK 809 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D +KID +F++D+ + + + I L +A L VVAE VE +Q L + Sbjct: 810 HMPIDTLKIDRMFIRDLPDDPNNQALASGIILLGRALGLKVVAEGVENVEQLRFLQERNC 869 Query: 714 QYLQGYLIGRPQP 726 QG+L+ +P P Sbjct: 870 DEAQGFLLSKPLP 882 Score = 46.1 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/217 (9%), Positives = 49/217 (22%), Gaps = 10/217 (4%) Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY 185 LV + + V + D+ L + + +L + A ++ Sbjct: 14 LRRLLVFSLLGAGLLSTVFLWADYQLMETLPAAQKAELSLQSAMLYILIACVVLIGGVVA 73 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + R+ + R W + + Sbjct: 74 WVLTANEARNKALRESRNNLDKAQQIARLGNWVWDLKRNEVYWSDQVYRNLGLSLHDNKA 133 Query: 246 VFFIIFTLGVGKLRYPFLNLT-WAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISF 301 + R + L A+ + + E + ++ + Sbjct: 134 SYEKFLECVHPDDRARIVKLVDEALENKQVYGIEHRVIWPDGEERIVCGAGEVIFDVQGN 193 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQAL--TDPLTLLPN 336 V + ++ + R + A D L N Sbjct: 194 PVQMHGTIQDITERKRDENRKNEYAHLIYD----LYN 226 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 647 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 103/573 (17%), Positives = 203/573 (35%), Gaps = 33/573 (5%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAG 241 R V ++ E +++ + +++ +L + G Sbjct: 127 LRKEVEAQRDRLATLVAELERAEGELSIAAVAFASQNGMVITDPKGVILRVNQSFTRLTG 186 Query: 242 YLVPVFFIIFTLG--VGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y G+ PF W ++ + Y+ + + Sbjct: 187 YSAAEAIGRTPAVLKSGRHDDPFYQRMWNSLVEKGYWQGEIWNKRKSGQIYAELLTITAI 246 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + + H A D LT LPN R L+ Sbjct: 247 VASGGITTHYVASFSDITEDKQAEAEIHRLAYYDALTRLPNRRLLQDRLGQALAAAARHG 306 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +DN + ++ G + + + + L ++E + + +L G E +L+L G Sbjct: 307 LYGALFFIGLDNFKTLNDTRGHDVGDLLLVEVAQCLRAQVREGDTVARLGGDEFVLLLDG 366 Query: 408 PE-TEGRLQHMVNIL-------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + + SR + F +T++ L + Sbjct: 367 VSGNADEAAAVAKEVGDKLREATSRPFSLDGQEYRCKLSIGVSLF-AALDTVEELFKRAD 425 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGE 517 Q+ L + + + L + + AL L L+ QP + Sbjct: 426 LALYQAKNAGRDR-LRFFDPAMQAAMDLRGALESDLHQALALDQLRLHYQPQIDTAGRVI 484 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRF 575 G + +L G+++P++F+PL L +LE+ + D + + Sbjct: 485 GVEALLRWWHPQRGLVSPNEFVPLAESTGLILPIGRWILETSCVLIKNWESDACTRSLQV 544 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ Q + ++ R K +P + LE+TE N E ++ + + + G Sbjct: 545 AVNVSARQFRQADFVEQVKRSLKASGANPARLKLELTESVLLKNVEDTIAKMLAIKRLGV 604 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++DDFGTGY++ L +L D +KID FV+ + + I R+I + + ++V+ Sbjct: 605 AFSLDDFGTGYSSLSYLAQLPLDQLKIDQSFVRKLPGARKEETIARTIITMGRELDMNVI 664 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE++ Q+ L G QGYL RP P+ Sbjct: 665 AEGVESEAQRQFLEAHGCHAFQGYLFSRPLPVE 697 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 647 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 100/557 (17%), Positives = 194/557 (34%), Gaps = 23/557 (4%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLA-ALSVLLLLLCTPYENDFIAGYLVPVFF-- 248 SP + + + A ++ I GY Sbjct: 16 SPQRRVEELSQQVERLSLYQAVFDNAFEGMFATDAANRIIAVNPAFTAITGYAAEEAIGN 75 Query: 249 -IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-- 305 + + +ST L + + Sbjct: 76 DPRMLSSGFHDPAFYQEMWDQLSTTGQWQGEVVDRHKDGRPVRLWLSITSQRGADGKVAR 135 Query: 306 -LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 + + R + + ++ DPLT LPN + + + + Sbjct: 136 RIAVFRDVTEARETAEQLWQRSNFDPLTELPNRNLFLDRLLQALVLAGREGSKVAMLFIG 195 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + ++ R +++ + + G E +VLSG ++ Sbjct: 196 LDGFKNINDSLGHWIGDKVLQEAARRFQNCLRQGDTAARFGGDEFTVVLSGVRATAEVEA 255 Query: 417 MVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 ++ + + + + + G+ E + L+ + +Q+ Sbjct: 256 VIRSVLEVLQEPFVVEHHHILISCSIGVCMWPGDGEDVDSLMRNATAALQQAKQAGRN-T 314 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + + + L + + AL QG+ L QP+ + + + +L Sbjct: 315 FRFFTPAMDARAQARSRLADELSGALSQGEFHLVFQPLVDVKSGKVNAAEALLRWHNRYL 374 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNI 589 G+++PD+F+PL + L +L + + +VN+ P Q +I Sbjct: 375 GVVSPDQFVPLAEEIGLIRPIGEWLLTAACREALVWQGMGLGEINIAVNISPRQFQQGDI 434 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 G I R + + P + +EITE SN E + +E + G +++DDFGTGY++ Sbjct: 435 VGIIRRALEDTRLPPWLLTIEITEGLLLSNGEEILAKMEAIRTLGVSLSVDDFGTGYSSL 494 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK D++KID F+ D+ ++ DA +V +I L + L VVAE VET+QQ + Sbjct: 495 SYLKSFPVDVLKIDRSFIADMGDHSDDATMVEAIIALGHSLHLEVVAEGVETKQQLDFIT 554 Query: 710 KLGVQYLQGYLIGRPQP 726 G QGY P Sbjct: 555 AQGCDVAQGYYFSPPLS 571 >UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBA9_AZOSB Length = 726 Score = 647 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 111/589 (18%), Positives = 206/589 (34%), Gaps = 24/589 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + V L + L L M ++ L R + S + Sbjct: 125 PYHVAQLQRAVESALHKAALERANRAMSQRLRTSERLHRYLVESSPDLIFTLDAEGRFSY 184 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 L+ + L N + + + L Y + + L L Sbjct: 185 LNPRVKALLGYDRNVLMRRPFTTLVMPEDVDRIATLLYAPVAGPGESFHVELRLRRNREL 244 Query: 283 QGVETEYSLAFILAVLI-------SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 ++ + L + L + R + QA D LT LP Sbjct: 245 LAGDSPEWITVALTGIPMPAREDGRRGGGLYGVARDISERKRAEEIISFQAYHDQLTRLP 304 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + + + + +D + ++ +G +R I L + Sbjct: 305 NRVLFKDRLELAIAQAQRRTGALAVMFIDVDRFKLVNDTFGHAEGDMLLRGIAARLAGTL 364 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 + + L +L G E ++L + + + S ++ F Sbjct: 365 RRGDTLARLGGDEFTVLLPDINGPQDAEVIARKILDSLSAPFPLSHGDFRATASIGIALF 424 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + + L Q + ++ ++++L N +RTAL++ + Sbjct: 425 PRDGDGAEDLTRHADIAMYQVKRSGKN-GFRFFDIALNSHYRERIVLENDLRTALERREF 483 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L+ QP + G + +L + G+++P F+P+ + L VLE Sbjct: 484 ELHYQPQISLTQHRVVGMEALLRWNHPNLGLVSPATFIPVAEEMGLIGDISRWVLEEACG 543 Query: 562 WLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 LA R S+NL P +++ + +R+ + P + LEITE +A Sbjct: 544 QLARWREAGHNDLRMSLNLSPHDFDSQDVVTMVTECVERHRLPPSQLELEITESMMMQDA 603 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + L + G +AIDDFGTGY+ L++ +KID FV+++ I+ Sbjct: 604 AGVAAKVRGLREAGLSVAIDDFGTGYSALAYLQKFPVSTLKIDRSFVREL-EGPNTNPII 662 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +IT +A+ L ++AE VE +Q L LG +QG+L RP P A+ Sbjct: 663 SAITGIARGFGLQLIAEGVERSEQAETLRTLGCDVMQGFLYARPAPAAE 711 >UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1U8_SHEAM Length = 1069 Score = 647 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 101/567 (17%), Positives = 215/567 (37%), Gaps = 28/567 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLV 244 I + A ++ RA + +A +++ + I GY + Sbjct: 483 IAAMAEAMNKMLKERKKYRQALVRAAAVFEYSAEGIMVTDADNHIELINPAFSQITGYSI 542 Query: 245 PVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 + + + ++ + + Y + ++ Sbjct: 543 EEVKGRNPSILSSHRNPPHLYDAMWESLRSTGKWEGEIWNRRKDGEVYPEYLAITLVRDD 602 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 V + + R + + +A D LT LPN + L + Sbjct: 603 EGQIVHHIGLFMDISRRKQYEQDIWYKANFDTLTDLPNRKLLSERLGHELKMAEHDGRKL 662 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D ++++ G ++++ + L +M + + +L G E ++VL Sbjct: 663 AVMVLDLDRFKYINDTQGHDCGDLLLKAVAKRLQTVMGSTDFIARLGGDEFVIVLPRLAQ 722 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E ++ L + + G + + ++ LL + Sbjct: 723 EHAVEQYAKRLLQSMGDPFKVEQGSMSVSASLGIGLYPQDGLDVETLLSNAETAMYGAKD 782 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + ++ +++ + +R A+ + L+ QP+ + E + +L Sbjct: 783 EGRNH-FKYFTQEMNLALIERLGMERDLRRAVANDEFCLFYQPVVDMESGEVTSLEALLR 841 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G+++P +F+P+ L V++ L LA G ++N+ Sbjct: 842 WQDPEQGLVSPVRFIPVAEDMGLMGELGQWVMDKALADLARLHTLGFGLSMAINVSACQC 901 Query: 585 L--QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 ++++ ++ R+ I+P+ + +EITE N+ + + + G I +DDF Sbjct: 902 HCKRQSLDEQLRSALSRHGIAPRHLHVEITESLLLDNSHHCLDTLNNIRDLGCAIYLDDF 961 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+ IKID FV+ + DA +VR+I +++K+ + +VAE +E++ Sbjct: 962 GTGYSSLSYLKKFPISAIKIDKSFVEQLPGCESDASLVRAIVNMSKSLGMKLVAEGIESK 1021 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 QQA L LG Q+ QGYL RP P + Sbjct: 1022 DQQAFLQALGSQFGQGYLYSRPLPFEE 1048 >UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBI7_METSD Length = 681 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 103/556 (18%), Positives = 195/556 (35%), Gaps = 19/556 (3%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R + + + I S R T ++ L E+ + Sbjct: 123 RDVTDAIRREREYHSLIENSPNLIVRFDTACRRTFVNQKTANLYGVAEDVLLGKTPSEFP 182 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 G ++ + + + + + + + + ++ Sbjct: 183 GGDSAYGYEQVVKEVFKSGRSAAMDLHWHAPDGNSRIIHIWLAAELDAS---GLPIAVIG 239 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 M + + R H A D LT LPN L L +D Sbjct: 240 MGQDVTETYEYQERIHHLAYFDTLTKLPNRALLIDRVEQTIAEAERHAYPFGLIMLDLDR 299 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + + L ++ + + +L G E +++S + + + Sbjct: 300 FKEINDTLGHTLGDVLLCEVASRLEKCVRPYDTVARLGGDEFGILVSEMRVPENITRVAD 359 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + + + + + + + + LL + Sbjct: 360 KVLQAFDQPFVVDGHDVFVTASLGIAAYPSDSQAVDDLLKYADSALFHAKHLGRN-NFQF 418 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIM 533 ++ + ++ + +R AL + + LL+ QP+ + E G + +L G ++ Sbjct: 419 YSADLTIKAAERREVETNLRFALKKEEFLLHYQPLVDLATREIIGAEALLRWQHESGKLI 478 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGR 592 PDKF+ + + L V+ S + + +VNL L ++ Sbjct: 479 MPDKFIGIAEETGLIIPIGEWVMRSACQVAVALNRGRPRPVTVAVNLSTRQFLHNDLVSS 538 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + + LEITE N ++ ++ L G I+IDDFGTGY+ L Sbjct: 539 IQAILAETGCHTDWIKLEITESLLLENTDNIQRMLQSLSAMGLCISIDDFGTGYSALSYL 598 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 R +KID F DI N A+IV++I LA+ + +VVAE VET +Q LHK+G Sbjct: 599 HRFPVRELKIDRSFTSDITDNAERALIVQAIVSLARNLNKNVVAEGVETLEQADYLHKMG 658 Query: 713 VQYLQGYLIGRPQPLA 728 QGYL +P PL Sbjct: 659 CPQAQGYLFSKPLPLE 674 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 106/587 (18%), Positives = 213/587 (36%), Gaps = 31/587 (5%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK--EKRAFTLSWLAALSV 225 LL++++ + + + R++ ++ + + + A + Sbjct: 93 TLLTVWSESVPFAQAGHKADRLVYVLDISERKKTHEQQQIAAAVYDASHEAIFVTDADNN 152 Query: 226 LLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 ++ + GY + + A+ L Sbjct: 153 IIS---VNPAFSRLTGYHFDDVNGKNPRMFKSSRHPPSFYAEMWHALHEKGLWIGEVWDR 209 Query: 283 QGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 +Y + V+ + + + M + QA D +T LPN Sbjct: 210 HKNGHDYLKELTVTVIRDAAGHIINHVGMFSDITLRKKQEELIWRQANYDAITDLPNRHL 269 Query: 340 LEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + EQ A + + +D+ + ++ G + + + L+ +Q + Sbjct: 270 FQSKLEQAAQHARRTGNLMALMLIDLDHFKAVNDSMGHRAGDMLLTRVSQRLIDSVQHAD 329 Query: 392 KL-YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + +L G E +++S + L S + + + + F + Sbjct: 330 TIIARLGGDEFAVIISDLFQPHDCDALAKALLENLSHPFNIDGENMFVSASIGIACFPTD 389 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L+ L + + ++ + N +R A+ + +Y Sbjct: 390 SDNLEALFKNADQAMYAAKNAGRN-GFSYYSPALHDAARTRLRMTNDLRKAIREEQFEVY 448 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + ++ G+++P +F+PL + + V + LA Sbjct: 449 YQPIVALDTGHITKAEALVRWHHPTHGLVSPAEFIPLAEETGIIIPLGNWVARQAIAQLA 508 Query: 565 THPC-DKKGPRFSVNLMPLTLLQKNIAGR-IIRLFKRYHISPQAVILEITEEQAFSNAES 622 + ++NL P+ L ++ A +R R+ +S A+ +EITE + Sbjct: 509 RWRQFCDPRFQMTINLSPIQLRSQDFADMDWLRELDRHGLSGDAIAIEITEGLLLNAEPR 568 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 N+ G +IAIDDFGTGY++ L+R D +KID F++D+ + + + + Sbjct: 569 VNRNLHMFRDAGIQIAIDDFGTGYSSLAYLRRFNIDYLKIDRSFIEDM--DGVGHELCVA 626 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +A + L VVAE VET QQ A+L ++G Y QG+L RPQ AD Sbjct: 627 IVAMAHSLGLQVVAEGVETLQQSAMLKRIGCDYAQGFLFSRPQSAAD 673 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 107/563 (19%), Positives = 199/563 (35%), Gaps = 21/563 (3%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R I + H L E + + ++ I GY Sbjct: 233 LRSIGTVHDITKQKIAQNELMLASEVFSKMSDGVVITDANQSIIKINESFTKITGYTNEE 292 Query: 247 FF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + + + + Y + L + Sbjct: 293 LIGMTPKAFSSGWHDEAFYKKMWDDIKQNGQWSGEIIDRKKSSERYIAEMNIIALHNDDG 352 Query: 304 ---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + + + + + H A D LT LPN E+ + + Sbjct: 353 ILTNYISITNDISKKKEQEKLIHNLAYFDSLTDLPNRVLFEERVVSRIPFSKRHDKKMAL 412 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +DN + ++ G M + + + ++E + L +L G E ++L + Sbjct: 413 LFIDMDNFKNVNDTLGHFMGDMFLIEVSNIIKNSIREQDTLARLGGDEFTVLLEDINSIM 472 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + + + + L G + + ++ L Q A Sbjct: 473 DIVPIAEKIIAAFNNPVLIESKELYTGISMGISLYPDDGKSYNELFKAADTAMYQVKASG 532 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARL 526 ++ ++ + T+++ L N++R A+ +L L QP N G + ++ Sbjct: 533 KN-NFQFFKQSMNEKITERLFLENSLRNAIGNNELFLVYQPKINLETKRVYGMEALIRWR 591 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + G++ PDKF+ + + L V + + S+N+ L Sbjct: 592 HPEIGLIRPDKFISISEETGQIYNIGLWVAKQAIIDTKALHEAGHILTVSINVSSKQLEN 651 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + I + I V LEITE SN + ++ + +L GF+++IDDFGTGY Sbjct: 652 EKFIDDICCVVNEIGIDKSYVELEITESHIMSNIDKALKILNELSDKGFKLSIDDFGTGY 711 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+L A IKID FV DI + D IV +I +AKA V+AE ETQ+ Sbjct: 712 SSLSYLKKLPAQTIKIDRSFVLDIYKDEDDRSIVATIIAMAKALGKDVIAEGSETQEHID 771 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L L +QGY +P + + Sbjct: 772 TLKYLHCNKVQGYFFSKPIEIDE 794 >UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 Length = 1578 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 111/562 (19%), Positives = 208/562 (37%), Gaps = 34/562 (6%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN-----DFIAGYLVPVFFIIFTLGV 255 +R E+R A L L T I GY F + Sbjct: 1010 QRAQNQLGENEERLRLALEAANQGFYDLNLQTGQAVVSPQYGQILGYDPQYFQETEQRWL 1069 Query: 256 GKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCL 305 ++ + + L + ++ + + Sbjct: 1070 ERIHPQDQQRVREIYDQYIQGKIPRYAVECRQRTMAGQWKWLLSLGKIVEWDSQGKPLRM 1129 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRI 357 L ++ + + A DPLT LPN R L + + + + Sbjct: 1130 LGILTDVTERKQAEAQIENLAYYDPLTALPNRRLLLDRAENALALAQRSKHFGAIVLIDL 1189 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G ++ + + L +++++ + +L G E +++L + L Sbjct: 1190 DGFKTLNDARGHDSGDRLLQMVAKRLADSLRDSDTVARLGGDEFIVLLPELAHDRELAAR 1249 Query: 418 --------VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + + F E + L + Q+ Sbjct: 1250 LGLGVGEKIRQALATPFTLEAEQVQISGSIGITLFPKLNEKVSDLFKEADTAMYQAKKAG 1309 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLK 527 + E + + + L +R+AL+Q +Y QP + G G + +L Sbjct: 1310 RDK-VCLFESQMQLEVESRFALEADLRSALEQKQFQVYLQPQVDSHGVWIGAEALLRWNH 1368 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G + P+ F+P+ + L VLE + ++LA R ++N+ P Q Sbjct: 1369 PGRGFIPPNIFIPIAEEIGLIGGIGDFVLEQVCQYLARLQQLGLTLRIAINVSPRQFRQA 1428 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N A I L + P + LE+TE + ++ + +L G ++DDFGTGY+ Sbjct: 1429 NFAKEIKNLLACTGVDPYRLTLEVTEGLIVEDTHQAIATMFELQTLGIHFSVDDFGTGYS 1488 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL + +KID FV+D + +A +V +I +A+ +L++VAE VET++Q Sbjct: 1489 SLSYLKRLPLNELKIDRAFVQDAPQDLNNAALVEAIISVARTFNLAIVAEGVETEEQVQF 1548 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L +LG + QGY GRP P+ + Sbjct: 1549 LAQLGCNFYQGYFYGRPMPIDE 1570 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 19/183 (10%), Positives = 45/183 (24%), Gaps = 15/183 (8%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDF 238 L + + E+ + ++ + +L Sbjct: 685 ALLNTVSQFLSRFLESHYTEIILERNERNYREIFNSTHEAIFIQDAHQATVLDVNQPMLT 744 Query: 239 IAGYLVPVFFIIFTLGVGKLRYP------FLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + GY I +G P + + + + Sbjct: 745 MYGYGNKEEVIGRPIGDFSADKPGKTEAEIEQKLRQARNAEPQMFEWLAKKQDGSLFWAE 804 Query: 293 FILAV-LISFSVCLLYMVRIYHRSEWLNRRWHLQA-LTDPLTLLPNFRALEQAPEQEAGK 350 + +I LL +VR + +R + L L+ + N +E + + Sbjct: 805 VSIQPTVIDGKSRLLAVVRDISERKQNQQRIEYLSRLYATLSQV-NRAIIENRERDDLFR 863 Query: 351 SFC 353 + C Sbjct: 864 AIC 866 >UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Burkholderiaceae RepID=B2JUP6_BURP8 Length = 980 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 104/562 (18%), Positives = 194/562 (34%), Gaps = 28/562 (4%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFF 248 + A + +E + TL + ++ L AG + Sbjct: 403 ASLEQTVAERTAELVSRELESRTLIENSPDTITRYDRDLRRTYANPAFCSSAGRSLGEAL 462 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLL---NYNQNFLQGVETEYSLAFILAVLI---SFS 302 + + + + +L E L I Sbjct: 463 GKRPSEIPGGANALIYERKIGEVIASGKSGQFELRWLSKDGQEQCSHIRLTPEIDPSGKV 522 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 +L + R QA D LT LPN + + EQ + Sbjct: 523 NSVLAVGRDLSDRMAFEAAIWQQANFDTLTQLPNRQMFQNRLEQEAKVAQRSGHRMALML 582 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G + R + ++E++ + +L G E ++L + G + Sbjct: 583 IDLDRFKEVNDSLGHDTGDTLLIEAARRITSCVRESDTVARLGGDEFTVILPDIDNCGSI 642 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + S + + + L L + Sbjct: 643 ERIARTIIETLSEPFALGPDEAFISASIGVTVYPDDARELDVLFKNADQAMYAAKNAGRN 702 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 L+ + K++ L + +RTAL LY QPI + + + ++ L Sbjct: 703 R-LNYFTPDLQVAAEKRLRLTSDLRTALPHDQFRLYYQPIVDLSTGDIFKAEALIRWLHP 761 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 + G+++P F+PL L V ++ + SVN+ P+ + Q Sbjct: 762 ERGMVSPLDFIPLAEDTGLIVPIGEWVFRQAVQQAKLWRQRFHPSFQISVNMSPVQIRQD 821 Query: 588 N-IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N + R + Q++ +EITE + + G RI+IDDFGTGY Sbjct: 822 NQLGALWSDYLTREGMPGQSIAIEITEGLLLHADLNIDARLATFRHAGIRISIDDFGTGY 881 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKR D +KID FV+++ + + + ++ LA L V+AE VET +Q+ Sbjct: 882 SSLAYLKRFDIDFLKIDRSFVQNLGFDADNQALCEAMVVLAHKLGLKVIAEGVETVEQRD 941 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L +G + QG+L +P P Sbjct: 942 FLTAVGCDFAQGFLYSQPVPPD 963 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 108/587 (18%), Positives = 204/587 (34%), Gaps = 37/587 (6%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 L N + R+ V+ + +++ TL V + Sbjct: 244 LSLNAMELGGQRLFVAIAHDITERKAAEEELRKQKEWLSTLINAMPDLVCFKDGKGKW-- 301 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL---------------LNYNQNF 281 + + + + G+ +++ L + Y + Sbjct: 302 LVANKFYLDIAGLDHVDYHGRTSADLAHMSRGFGEFMLTGSLSDERAWQEKKPVAYEKEL 361 Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 I L L+ + R + R H A D LT LPN Sbjct: 362 PTPDGGAKVFDVIKIPLYEEDGARRGLVMVGRDVTERKLAAARIHHLAHHDSLTGLPNRV 421 Query: 339 ALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 ++ + L +D + ++ G + ++++ + LL ++E Sbjct: 422 LFQERLRTALAQAKRLGHKVALMFLDLDKFKDINDTLGHHLGDLLLKAVAKRLLRCVRET 481 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E +VL+ + ++ + S + ++ F + Sbjct: 482 DTVARLGGDEFAVVLTNLDDPEGASNVAESIIASISEPFGLDEHEVNTSTSIGITIFPDD 541 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL +S A + + + ++ + +R AL L ++ Sbjct: 542 AVDSEVLLKNADLAMFRSKAEGRN-NYHFYVAEMDAEIQARKVVEHDLRVALGTDQLEMH 600 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ E G + ++ G ++P +F+P+ + +L +L Sbjct: 601 YQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTDLIVPLGRWILHRSCLQGR 660 Query: 565 THPCDKKGP-RFSVNLMPLTLLQKN-IAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 P + +VNL P+ + I + + P + LEITE A N E+ Sbjct: 661 DWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEITEGIAMQNVEA 720 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ + QL G I+IDDFGTGY++ LKR D +KID FV DI + +A +V + Sbjct: 721 TVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVNA 780 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I L + V E VET +Q L GV QG+ + P + Sbjct: 781 IVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDE 827 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 114/683 (16%), Positives = 234/683 (34%), Gaps = 46/683 (6%) Query: 67 VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 + +F + +Q ++ + + + L + + + + + Sbjct: 31 LAASIFFLTRDAKGVYRVQREDLVSLAEIIGANSASALVFDDPESAQRTIAPLASKRSIL 90 Query: 127 WLGLVTPIGIKCSMYLV--GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + ++T G + ++ + PL+ A+ V+ + F Sbjct: 91 AVYVLTSEGQIMARHVAPEAGNAELPLERLGASPSPAAVLAAVETIRKTAEKKSAVPGFD 150 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 L + P + + E L W A +++L +L+ F A Sbjct: 151 CLVQ----PVYFDYERVGTVVIHADTELFRKNLRWTATVTLLFMLVTVIAAYFFSAKLQQ 206 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + + L+ NY + + E L + Sbjct: 207 MISRPL-----------LDLLSSMKDVSASKNYAIRVAKPSDDEIGLLY---------DG 246 Query: 305 LLYMVRIYHRS----EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 M+ A DPLT LPN S Sbjct: 247 FNEMLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERNRQALSV 306 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D+ + ++ G + + L +++ + + +L G E + Sbjct: 307 IFIDLDHFKDINDTLGHRTGDLLLIDVANRLSTVVRSCDTVARLGGDEFTVFTQNVMNAD 366 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + L ++ + + + F + +T+ LL + A Sbjct: 367 NAAIVAAKLNALFAKPFQLGESEIYVTASIGVTLFPNDGKTVDELLMNADIAMYHAKACG 426 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + ++ ++V LL+ +R AL++ + +L+ QP + + ++ + Sbjct: 427 KN-VYKMFDRKMNEHANERVTLLSDLRLALEREEFVLHYQPKVDLLTGNVTSVEALVRWM 485 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 G++ PDKF+ L + VL + G R +VNL P Sbjct: 486 HPRLGMLAPDKFIRLSEESGFIVELTDWVLRTACTQAKKWQEQNLGSVRVAVNLSPYHFQ 545 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 ++++ I + + P + +EITE N E + +L + G I++DDFGTG Sbjct: 546 RQDVKEAIFSVLDATGLEPALLEIEITESALMQNDEYTCALFRELRELGMTISVDDFGTG 605 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L R + +KID F+ +++ ++ D IV +I +AK+ ++ +VAE VET Q Sbjct: 606 YSSLSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTAIIAMAKSLNMQIVAEGVETVDQL 665 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L G +QG+L+ RP Sbjct: 666 EKLKDQGCHEIQGFLVSRPVAAE 688 >UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPZ0_9BACI Length = 975 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 105/567 (18%), Positives = 202/567 (35%), Gaps = 25/567 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAG 241 + + + R+ E+ +L V L G Sbjct: 394 VSLTQLINASSSDIRKLSENIQISEEYYRSLFENNTDFVYSTDLEGRFNSVNPTFLKTFG 453 Query: 242 YLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE--YSLAFILAV 297 Y + + + + + Y + + I Sbjct: 454 YSEEELIGKLSISFIFEEDIPRIKRHFYRTLSGKEQFYEIWIPSKSGEVQLFHIKNIPIT 513 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAG 349 + V L + R + + A D T LPN + A +++ Sbjct: 514 VDGHCVGLFGIGRNITEQKKTEEKITYLAYFDAETGLPNRIKFRELAEEFISRAKKKKRR 573 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 L ID + ++ G + + + + + L + + +++S Sbjct: 574 IGVLFLDIDRFKLINDTLGHSAGDQILIELAERIKNALPKGAYLGRFGSDKFTILISKNV 633 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 T +L+ + ++ I N + G + + L LL + Sbjct: 634 TNEKLKQVAELIAENIQMPIIQGNQEFYIKASIGVGVYPDHGTDLADLLKNADTALNWAK 693 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 ++ + ++ ++V + + +R AL++ +L + QPI +K G + +L Sbjct: 694 SNGGDQIV-FYTNEMNIMAMEKVKMESYLRKALEREELYIVYQPIVELNDKRVIGAEALL 752 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPL 582 G+++P +F+PL + L VL K SVN+ Sbjct: 753 RWNHPYLGVVSPMEFIPLAEETGLIGSIGNWVLTEACKQAKEWQEKGFPDFYISVNVSAN 812 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + I K +S +++ LE+TE ++ ++ +E+L G +IAIDDF Sbjct: 813 QFQQPSFTNEINHALKTSGLSAESLCLELTESVMIQHSGHTIDRMEELAALGVKIAIDDF 872 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK L ++KID FV++I ++ D IV++++ + K + VV E +ET Sbjct: 873 GTGYSSLGYLKHLPLHVLKIDKSFVQNIEESSPDYAIVQAVSMMGKGLGMQVVVEGIETS 932 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q LL L QGY I RP + Sbjct: 933 EQMVLLSHLNCDLGQGYFISRPVFPDE 959 >UniRef50_C6BM04 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Burkholderiaceae RepID=C6BM04_RALP1 Length = 902 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 112/634 (17%), Positives = 222/634 (35%), Gaps = 37/634 (5%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 ++ +RL V IG+ + + P + + L + Sbjct: 271 VSGTDGVERLLGYHHVPEIGLYFLVGESIASILAPYE----------AYRRTALAGAIGS 320 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF--TLSWLAALSVLLLLLCTP 233 L+ +L+ L R + R + TL + T Sbjct: 321 TLLMALLYATLRRSMSQRKQHIDEMRLASLVYASSSEAMMVTTLDGTVIDVNPAFTVTTG 380 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 Y G + AV+T + + TE+ Sbjct: 381 YTAQEFKGQHSDAIRSECNDSA-----VVDTMRTAVTTKGTWSGEYLIRRKDGTEFPALL 435 Query: 294 ILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 + + + ++ + QA D LT LPN Q Sbjct: 436 TVDTFAGHKLGAPSRVALIHDITEKKRAEEVIWRQANFDTLTELPNRHMFYAKLRQEILH 495 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + +D + ++ G ++ I R + +++ + + +L G E Sbjct: 496 ARQAATAVALLFIDLDRFKEVNDTLGHDQGDVLLKEIARRISAIVRGTDTVARLGGDEFT 555 Query: 403 LVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L G ++ L +R + +++ + + + + LL + Sbjct: 556 IILPNLPDAGAAAPIIRSLLARIATPVQLGEESVEVTASIGLALYPRDADNAESLLVRAD 615 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---G 516 + + + +++ + + +R A++Q L ++ QPI + Sbjct: 616 QAMFAAKSAGRNQ-WSVFTPALQRAEQERLRITSDLRIAIEQKQLAVHYQPIVDLRSGAI 674 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRF 575 + ++ G + P F+P+ + L + VL L + + + Sbjct: 675 NKAEALIRWTHPVRGEIEPADFIPVAEETGLIVQIGKWVLNEALTEVTRWHTVLGRHMQV 734 Query: 576 SVNLMPLTLLQKN-IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN P+ + + KR I P ++++EITE + + ++ +L + G Sbjct: 735 SVNKSPVEFRAAGQLGDSWADVVKRRAIRPGSLVIEITEGALMEGSAEVVDHLTRLRQAG 794 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 IA+DDFGTGY++ LKR D IKID FV+ + + D + +I +A A + V Sbjct: 795 IEIALDDFGTGYSSLSYLKRFDIDYIKIDQSFVRSLAHDPKDIALCSAIVSMAHALRIKV 854 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AE +ET++Q+A+L G Y QG+L P P A Sbjct: 855 IAEGIETEEQKAILVAAGCDYGQGHLFCPPVPPA 888 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 113/618 (18%), Positives = 211/618 (34%), Gaps = 30/618 (4%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM-IVSPHFAQI 198 + V + V+D +L + L + + A Sbjct: 207 LLTVAANDMLIRARDMLMDHQVRHLAVLDDRGQVVGLLGFQDLLAGAEQSYLKDLRRALE 266 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFIIFTL 253 + +A S + A + + +++ + GY + Sbjct: 267 QRDKALAQSRKHLQLAERVIDSSLEGIVITDAHARIEFVNPAFTHLTGYSLEEVAGRTPA 326 Query: 254 GVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLY 307 + R+P + + A+ + Y + + + Sbjct: 327 VLSSGRHPPSFYREMWQALQEQGYWRGEIWNRRKSGALYLELLTITAITNDDGDTTHYAG 386 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + R+ A DPLT LPN R L+ + + +D+ Sbjct: 387 LFTDITHIRENERQIRQLAYYDPLTRLPNRRLLDDRLSLAIKHAHRHRQRLAVMFIDLDH 446 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + + L ++E++ L +L G E L +L + + Sbjct: 447 FKQVNDTLGHAVGDELLLRVSERLREHLREDDTLARLGGDEFLALLPDLQEVDEAIRVTQ 506 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L S+ + +G + + E+ L+ +S Sbjct: 507 RLIEAISQPYTIGDHDFRVGCSIGLSLYPDDGESPDALIRNADGAMYRSKTEGRN-TYRL 565 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGD-LLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + + Q+ L +R + G+ L ++ QPI + + +L G Sbjct: 566 YAPEMDTRAKNQLALETALRDTAETGEGLSIHYQPIFDWRTGALHSAEALLRWHHPTRGA 625 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAG 591 + P +F+PL + L V+ + L ++NL Q + G Sbjct: 626 VAPGEFIPLAERSGLIIPLGQAVMRMVCTQLKRWQAAGLRPVPVAINLSAKQFWQDELPG 685 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I ++ +R ++P + E+TE + E + + L G +AIDDFGTGY++ Sbjct: 686 FIRKMLQRCDLNPGLMGFELTESTLMHDIERGLDTLAALRGMGCSVAIDDFGTGYSSLTY 745 Query: 652 LKRLQADIIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+RL +KID FV D+ T IV ++T LA+ L VVAE VET+ Q L + Sbjct: 746 LQRLPVTTLKIDRSFVSDLGTCRKGGCAIVAAVTGLARELELQVVAEGVETEAQLRALDR 805 Query: 711 LGVQYLQGYLIGRPQPLA 728 V +QG+ GRP P Sbjct: 806 YQVALVQGFKTGRPVPAD 823 >UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=30 Tax=Burkholderiaceae RepID=B2UGH6_RALPJ Length = 917 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 109/581 (18%), Positives = 200/581 (34%), Gaps = 39/581 (6%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDF 238 L I + E+R +++ +L C P Sbjct: 325 GLLDGITDIIGVAVQKAHIARDLRESEERYRLAVDNLTEGIVVQTADGTILACNPSARRI 384 Query: 239 IAGYLVPVFFIIFTLGVGKLRY-----------PFLNLTWAVSTLCLLNYNQNFLQGVET 287 + V + + P + L L + G Sbjct: 385 LRAGSVSPVGTSHLALMRRSLREDGSEIPVNERPTRVVLATGRPLLGLTVGLELVDGDVV 444 Query: 288 EYSLAF--ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 I+ + +L + ++ A D LT L N Q + Sbjct: 445 WVHENVLPIVRPGDNTPSAVLISFNDIGPARAAQQQLTFLAQRDALTGLYNRAYFSQRMQ 504 Query: 346 -----------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + L +D + ++ G H +R + + L +++++ L Sbjct: 505 AVMEQAASQANEGHQVAVLFLDLDGFKKVNDTAGHEAGDHLLRIVAQRLSACVRQSDTLA 564 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E +++L + G + + + ++ + T +G + + Sbjct: 565 RLGGDEFVVLLDNVRSLGEAERLAKRIVHSIAQPFSTSGTEYYLGASIGIALYPEHGNDA 624 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL + + +S + ++ L +R AL G+L L QPI Sbjct: 625 ATLLRCADAAMYNAKQNGRNQ-HRVYTARLSQRAQRRFQLEYHLRRALTAGELSLRFQPI 683 Query: 512 RNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + G + +L + G ++P +F+P+ L VL + A Sbjct: 684 VDATSMDIVGAEVLLRWHSTELGEVSPAEFIPVAEDAGLIGDIGEWVLAQACRQAAHWRA 743 Query: 569 D-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 +VNL P + + I R + A+ +EITE + + M + Sbjct: 744 TCMPEFFVAVNLSPRQFG-EGLVPTISRCLTEAGLPASALEMEITEGLLMRDTAAVMPML 802 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + L G RI+IDDFGTGY++ L+R D +K+D FV I + +I R++ +A Sbjct: 803 DALTALGIRISIDDFGTGYSSLSYLQRFPIDNLKVDRSFVSGIPRHRDSVVISRAVVAMA 862 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + ++V AE VET +Q L G LQG+L G P A Sbjct: 863 ASLDMTVTAEGVETLEQAEFLQAAGCDKLQGFLFGPPMTAA 903 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 11/133 (8%), Positives = 31/133 (23%), Gaps = 10/133 (7%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + P + R L ++ ++ + L +G + Sbjct: 29 QDSRRPLPLADDRYEALVRQMPDALYIVADDIIVFVNEAGVRLFGAQTARDIVGHELDEF 88 Query: 261 PFLNLTWAVSTLCLL---------NYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVR 310 N Q L+ T + + A + + + + + R Sbjct: 89 VHDNSMHLARQRREWMVSHGAGLPPVEQTLLRCDGTPVEVEVLSAPVQLGWRTAIQVVAR 148 Query: 311 IYHRSEWLNRRWH 323 + + + Sbjct: 149 DITQRKQAEQALR 161 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 91/564 (16%), Positives = 196/564 (34%), Gaps = 30/564 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS--VLLLLLCTPYENDFIAGYLVPV 246 I A+ + + + T Y D I G Sbjct: 446 DITKRKLAEESMQLASMVYQNSREAMTVTDSNGNIITTNPAFTEMTGYSADEITGKSHTF 505 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL- 305 + + + + + A+++ + Y + + + + Sbjct: 506 I-----VSKQQDKRVYQRMELALNSTGHWRGEVSCRHKNGENYMALLGINSIYNEDRSVH 560 Query: 306 --LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + + QA D LT L N + + L Sbjct: 561 RRVAQFSDITERKKSEKIIWKQANFDNLTGLSNRQMFHDQLLHEKNKAQRRGLNVGLLFL 620 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G M + + + L +++ + + + G E +++ G + ++ Sbjct: 621 DLDRFKAVNDTLGHNMGDQLLIDVAQRLRNCVRKRDLVSRFGGDEFTVIIGGLKNTQSVE 680 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + + + + E + LL + Sbjct: 681 RVAQKILCELAEPFLLGEQNVYITPSIGITFYPKDGEATEMLLKNADQAMYSAKEKGRN- 739 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + Q + L N +R AL + L LY QPI + + ++ + Sbjct: 740 CYHYFTNSMQEQVERGGQLANDLRYALKKNQLELYYQPIVALGTGQIRKAEALIRWHHPE 799 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK- 587 G+++P +F+P+ + V +A + + + S+N P+ + Sbjct: 800 LGMVSPAEFIPIAEETGTIVEIGDWVFRQAADQVAHWRREYQNDFQVSINKSPVQFREGG 859 Query: 588 -NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES-SMYNIEQLHKFGFRIAIDDFGTG 645 +I + L + QAV++EITE + + + G +++DDFGTG Sbjct: 860 SDITSWLEHLLAL-GLPGQAVVIEITEGLLLDGSSRIVIDKLLAFRDSGIEVSLDDFGTG 918 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L++ D +KID FV+++ ++ D ++ +I +A + V+AE +E ++Q+ Sbjct: 919 YSSMSYLRKFHIDNLKIDQSFVRNLKVDSDDMILCEAIIIMAHKLGMQVIAEGIENEEQR 978 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 LL G Y QGYL +P P D Sbjct: 979 RLLSAAGCDYGQGYLFAKPLPEKD 1002 Score = 67.3 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 32/320 (10%), Positives = 86/320 (26%), Gaps = 24/320 (7%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPL------CVMLSILFIFGWRGVVPVLCGMFCTN 75 L+ FI +A + +F + + ++ I+ + W ++ Sbjct: 15 AALLLAMFFIYDMAAFRNRTVFGFYWAIFTGIALGLIGIIIMLTPWEYAPGIIVDSRAVL 74 Query: 76 LWNFHLSFLQT-AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 L L F ++ T + +G + + R + ++ + Sbjct: 75 LGISGLFFGTIPTLIAMVITATLRLFQGGGAAVIGVLVIITSGTLGIAWRYYRPHPLSEL 134 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 + L ++ F T+ L ++ VL+ L L M+ Sbjct: 135 SFREIYLFGVIIHGVMLALTFIFPWE---MTLAVLSNISLPVLLLYPLITALLGMLFVQR 191 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFI 249 + + E + L ++ + + L I GY + Sbjct: 192 ---LRRNQSTDALKESEFLFRSQFDLGSIGIAITYPGKGWLRVNPRLCEILGYREEELLL 248 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLN----YNQNFLQGVETEYSLAFILA--VLISFSV 303 + + L+L L ++ F++ + ++ + Sbjct: 249 LNWSELTHPDDRHLDLYQYDQMLTGEEDGYSLDKRFIRKDGESVYVHMTISCYRVDGAVQ 308 Query: 304 CLLYMVRIYHRSEWLNRRWH 323 ++ + + + Sbjct: 309 FVIAGILDSSERKHAEDKIR 328 >UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JTT5_BURVG Length = 884 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 108/582 (18%), Positives = 210/582 (36%), Gaps = 34/582 (5%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 LI + + ++V H R A E+R + +V + Sbjct: 300 LIAYLSLAVVVLLLVIIHRQLRQLARRTAAIEESERRFDRVLQELTDAVYVRDRDGR--- 356 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET--------- 287 +A + F + + L + + N L Sbjct: 357 IVVANRKFGLLF-GAEDTRSLVGKNIVELLAHTTKQMVAEVNNRVLNSHGAPMSLEIETT 415 Query: 288 ----EYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + + + S +L +R + QA D +T LPN R Sbjct: 416 THSAVLPIEYTFSAVDISGQSHVLCQMRDVTTRRQYEAQLVKQATFDEITGLPNRRLYID 475 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 G + + +D+ + ++ G + + + L L++ + + Sbjct: 476 RLSNALHRSKRDGTGCAVMFIDLDHFKRVNDTLGHPFGDQLLIAAAQRLSGLLRPGDTVA 535 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E +L++S + + + + + +G F G+ Sbjct: 536 RFGGDEFVLLMSDFTDPMECRIVAEGIVEAFAAPFEVAARSISVGASVGVSVFPGDGTEP 595 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL ++ + ++ + + + IR+AL + ++ + QPI Sbjct: 596 DILLQHADTAMYEAKSAGR-SGFCFFNHDMNARVHDMLRIDARIRSALARNEISVLYQPI 654 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + +E + + D G + PDKF+P+ + L A+ VL+ A Sbjct: 655 IDPVTREIVKAEALARWHSEDLGHVPPDKFIPVAEENGLIAQIGDWVLQEACMNAAKWSK 714 Query: 569 DKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + SVN+ + + + + LEITE S+ E+++ I Sbjct: 715 ELASPITVSVNVSAKQFDDPTFVDSVFAALETSKLPAHLLELEITERVLISDDETALETI 774 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L + G +++DDFGTGY++ L + + IKID FV+D+ + + R+I +A Sbjct: 775 SALREIGVGLSLDDFGTGYSSLSYLTKFPLNTIKIDRAFVRDLDHDEQTQNLTRAIIAMA 834 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 K+ L ++AE VETQ+Q L G +YLQG+ GRP ++ Sbjct: 835 KSLDLKLIAEGVETQEQADKLVLYGCEYLQGFYFGRPMTSSE 876 >UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88HN4_PSEPK Length = 733 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 116/616 (18%), Positives = 215/616 (34%), Gaps = 31/616 (5%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + L + + G F + ++ + + + Sbjct: 114 FRSLALGYNLRSCWSLPLLSHEGSVLGTFALYQDQAIAPSEVQI-----HRLTCAAQLAA 168 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 I RD E+R +L V L ++ AG + +G Sbjct: 169 IAIRHERDGQRLEESEQRFRSLFTYNPNPVFALDRAGNIQSVNPAGLKLKAGAATDLVGH 228 Query: 256 GKLRYPFLNLT-------WAVSTLCLLNYNQNFLQGVET---EYSLAFILAVLISFSVCL 305 F +A + + +A + ++ V + Sbjct: 229 HFSHLVFEEDLPKVNQHFFAARAGEPQRFEARVRDESDDKQLIMDIANLPIMVNGEIVGV 288 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + R + + R+ + A D LT L N +LE +++ + + + Sbjct: 289 FGIARDISKQKHYERQLSINASHDGLTGLLNRLSLEDRLVQACRSSRQRKVQLAVMYIDL 348 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + + + L ++ + + ++ G E +++L+ + + Sbjct: 349 DGFKSINDSIGHYFGDQVLIEVAQRLTQQVRPADTVVRMGGDEFVVLLTDLLRDEDAVPV 408 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 L + + L + DG+ E L+ Q ++ Sbjct: 409 AERLLASIGKPYCIQGIDLHVSTSIGITVSDGHIEQPMKLIQQADMAMYKAKQQGRN-NF 467 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 ++ + + L N ++ A+ L+ QP + G + +L G Sbjct: 468 QWYTSDLNHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIEARTRRVVGIEALLRWEHPVRG 527 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIA 590 ++P F+P+ L VL++ L +VN+ P+ Sbjct: 528 FISPAVFIPVAEDSGQIIPLSLWVLDTACAQLRDLCDQGFNGISMAVNISPMHFQCGQFV 587 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + ++ +S + LEITE N E ++ + +L G RIA+DDFGTG+++ Sbjct: 588 ECIQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLGVRIALDDFGTGFSSLS 647 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK L D IKID F++DI TN DA I + I +A SLSVVAE VET Q L + Sbjct: 648 YLKCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLER 707 Query: 711 LGVQYLQGYLIGRPQP 726 LQGY RP Sbjct: 708 GRCDILQGYYFARPMS 723 >UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter RepID=B8H1B9_CAUCN Length = 842 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 134/748 (17%), Positives = 252/748 (33%), Gaps = 43/748 (5%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFL-AWMPLCVMLSILFIFGWRGVVPVLCGM 71 I + + I ++ +S + H + + W L + ++L + GW G Sbjct: 75 ILRMTPVMMSANIAIAFLVSLAGMSHPHRVGIGIWAALVISYALLGLRGWVSAQRRKTGK 134 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + LQ A ++ +L V + + Sbjct: 135 AAVSARGVRRVVLQAA--------LLGLLWGVLPVLTFRLGDTSAMPMMVASVIAGMIGC 186 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF------YY 185 + ++ + S + + L L ++ + Sbjct: 187 GGFALLTLPAAALAYSTPMVLGSLYMLGTSGDPILYALGGLLVFCYAVVIVSCLSHARIF 246 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFI 239 R++ + + + S +E + L + A L + ++ + Sbjct: 247 AERLVAADELEKQKQVVSLLLSDFEEGASDWLWEVDAAGRLTYVSDRMAAAAGVDKDALL 306 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + + G L +++ G + A + Sbjct: 307 GQPMSDLCGAAEAPGGPVAALSALFAEQKTFRDVVVSITVADDAGRPATHWWALSAKPVH 366 Query: 300 SFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQEA--- 348 + + ++ R A D LT LPN +L Q + Sbjct: 367 DLDGLFVGFRGVGADITQAREDQERISHLAHYDVLTQLPNRLSLLQNLGKAWMDHGRDKT 426 Query: 349 -GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 G + CL +D+ + ++ G + + + L + E + +L G E +V + Sbjct: 427 SGCAVLCLDLDHFKGVNDSLGHPVGDALLMQVASRLRSCVGETGMVARLGGDEFAVVCAP 486 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 L + + S + +G + + LL + Sbjct: 487 SPGHEALSALSQSIVETLSAPYDILGHNVLIGASVGIAVAPFDADDPDGLLKNADLALYR 546 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + A E + ++ L +R AL + +L L+ QP+ + E G++ Sbjct: 547 AKGDGRG-AYRFFETAMDVWAQERRALEMDLREALARDELKLFFQPLIGRRDNETTGFEA 605 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 +L G++ P F+ Q+ L R VL + AT P +VNL P Sbjct: 606 LLRWQHPTRGLVPPSDFIECAEQWGLIGRIGEWVLNEACRTAATWPS---HLTVAVNLSP 662 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 ++ ++ K ++P + LEITE ++ ++ + L G +IA+DD Sbjct: 663 NQFASGDLVDQVRAALKASGLAPARLELEITEGLLLHDSAKTLEQLAALKALGVKIAMDD 722 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L R D IKID FV ++ N A I+R+I L + +L V AE VET Sbjct: 723 FGTGYSSLAYLWRFPFDKIKIDRSFVAEMQDNVAIADILRTIALLGQTLNLEVTAEGVET 782 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q Q LL ++ QG+L GRP P+ D Sbjct: 783 QAQARLLAEMRCDQFQGFLFGRPMPVGD 810 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 99/563 (17%), Positives = 194/563 (34%), Gaps = 25/563 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 ++ A+ + + + E + + I GY Sbjct: 502 LAVVRDITVAKKAEEKLLLAAKVFENTVEGIVVTNTEG---TIEQVNPGFTVITGYSADE 558 Query: 247 F---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---S 300 ++ + + ++ + Y ++ + Sbjct: 559 AVGSNPRILKSDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVKNEAG 618 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSF 352 + + + + QA D LT +PN L + Sbjct: 619 QTTNYVSIFHDITELKRQQDALEYQAQHDALTGMPNRILLGDRLRMALAQLARSGGKLAL 678 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 +DN + ++ G + + + R L L++ + L +L G E L++L E+ Sbjct: 679 LFFDLDNFKTINDGLGHGVGDELLVDLSRRLERLLRSGDTLARLGGDEFLILLPEIESVD 738 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 H+ + H + + + L+ ++ + Sbjct: 739 AASHIATRMLDALKAPFHHGDVEYFVTASIGLTIAPDDGNEAPKLIKNADMAMYRAKSMG 798 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 + +++ + +R A++ + L+ QP+ + G + ++ Sbjct: 799 RN-NYQYFTPEMDVAAHRRISMEYKLRKAIEAQEFELFYQPLVHIQSGHILGAEALIRWR 857 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 +G +++P +F+PL + L VL + SVN+ Sbjct: 858 -CEGKLISPAEFIPLAEESALILPLGDWVLRTAAHQAKLWQDAGHDLTMSVNISSRQFSG 916 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++A + + + P + EITE + + + L + G +DDFGTGY Sbjct: 917 ADLAVTLREVLLDTELRPGRLYFEITESMLMGDVSKAETTLLNLREAGGTFFLDDFGTGY 976 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKRL D +KID F+KDI ++ IV +I +A+ +L +VAE VETQ Q+ Sbjct: 977 SSLSYLKRLPIDGLKIDRSFIKDITDDSDSRAIVAAIVSMARTLNLRIVAEGVETQAQRG 1036 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 LL +G LQGYL RP P D Sbjct: 1037 LLASMGPIVLQGYLASRPVPAQD 1059 >UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIT7_9PROT Length = 794 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 112/632 (17%), Positives = 225/632 (35%), Gaps = 27/632 (4%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA------DAIFTVVDLLSLFTAVL 177 + + I +L+ + +++ F D F V + T Sbjct: 152 WFIGGVSIFGLAIALLGFLLYNSLKRLSVLASSFERFNPNRPKDFHFNVQTNDEIGTINR 211 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYE 235 N++ LT+ I + + A ++ A SW LLL Sbjct: 212 SANIMVQKLTKYIDNTQKLNDTILQKEAHLKEAQRIAKVGSWEYNVIDGSLLLSDEVYRI 271 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI- 294 G + + + + A+ N + + E + Sbjct: 272 LGVKFGTAITWKDFLDFISKDDYDNVVKVIEDAIKHGSKFNIKYALILKSKNEIYVQTRG 331 Query: 295 -LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + V + + + A D LT L N L+ Sbjct: 332 KVRKKAGGMVRITAVSMDITNDIKNKKTIEKLAYYDSLTGLANRTLLKDRMHKAIQYAKR 391 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 ++ + L +D+ + ++ G + + I L ++E++ L +L G E +++L Sbjct: 392 EQTNLAVMFLDLDHFKLINDTLGHSVGDDMLIHIAEILKIHIRESDTLSRLGGDEFVILL 451 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 ++ Q++ + + + + L + + + + + L+ Sbjct: 452 PSVKSIFDAQNIASKIQHTLQSKHDIGDHQLYITSSIGVSLYPDHGDNSEELIRNADTAM 511 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG-DLLLYAQPIRNKE---GEG 518 ++ + + +Q+ L + A+ + ++ Q + E G Sbjct: 512 YEAKNSGRN-NYRIYSQSMGNYVDQQLHLEQDLIQAVKHKAGIEVFYQAKIDSENNFISG 570 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + + G++ PD+F+ + L ++E + L G + ++ Sbjct: 571 AEALARWRHPTNGLIFPDQFIHIAESTGLMIELGNIIIEESIFQLQEWNKLGLVGLKIAI 630 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL N+ I + Y +SP V EITE + +N +++ + +L G I Sbjct: 631 NLSARQFQDPNLVSFISSMLHNYQVSPSQVEFEITETLSMTNMTNTLRILTELKAIGVSI 690 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTG+++ LK+ + +KID FV DI+ + D IV++I +A + + VAE Sbjct: 691 AIDDFGTGHSSLAYLKKFPINTLKIDRSFVLDIIEDDDDKTIVQTIVSMAHSLGFNTVAE 750 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET + ALL +G LQGY +P P + Sbjct: 751 GVETLEHVALLKTMGCDQLQGYYFSKPIPKDE 782 >UniRef50_C3XA65 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3XA65_OXAFO Length = 999 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 101/588 (17%), Positives = 209/588 (35%), Gaps = 29/588 (4%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPH-FAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 L A L+ M + + H + R + LS A ++ Sbjct: 372 AWYILLLAFLVIVMTGLGMVFYMRHRHMQHKTERLRMELKQKALRQHYDYLSKYANDVII 431 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVG---KLRYPFLNLTWAVSTLCLLNYNQNFL- 282 L + +F +G + + + + L + + Sbjct: 432 L--MDGNGTMIEANDRSEKMFGKSRAEMIGQNIRCVFDLKDTSVFEEKWMELKLEKGLIF 489 Query: 283 -----QGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + + V+ + + +++R + A D ++ LPN Sbjct: 490 EAYGKHTNGSIFPVEISSRVIETDGRLFVQFIIRDISEKKKAEEMVWRHANYDQISGLPN 549 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 R + +A + L +D+ + ++ G + ++ L ++ Sbjct: 550 RRMFTEKLFFETRKAQRSDASVALMFLDLDHFKDVNDTMGHGVGDCLLKEASDRLRVCVR 609 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 E + + +L G E +++S + ++ + + S + + F Sbjct: 610 ETDTVARLGGDEFTVIVSDIDDFKDVERVAQCILDELSEPFTLEGQSVHISASIGITFFP 669 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ + + + K++ ++N + AL+ Sbjct: 670 QDAKDTHDLMKNADQAMYAAKSLGGNQ-YHYFTPSMQEAVQKRMHMINDLHVALENNQFE 728 Query: 506 LYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 QPI + + + ++ G++ P F+PL L F V K Sbjct: 729 TVFQPIIDLKTGDICRAEALIRWHHPVHGLINPASFVPLAEDTGLIQAFGDWVFLEAAKA 788 Query: 563 LATHPCDKKGPRFSVNLMPLTLLQKNIAGRI-IRLFKRYHISPQAVILEITEEQAFSNAE 621 + + SVN+ P+ + I + K ++ P+A+++EITE E Sbjct: 789 ASRWRKYVPDFQVSVNISPVQFKNEGIDTNVWFAHLKSLNLPPEAIVIEITEGLLLDIDE 848 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + + L G +A+DDFGTGY++ LK+L D +KID +FVK++ T+ D ++ Sbjct: 849 HTSNQLLALSDAGIEVALDDFGTGYSSLAYLKKLDIDYVKIDQMFVKNLTTSEEDRVLCE 908 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++T +A ++V+AE VET Q +L Y QGY I P + Sbjct: 909 AMTVMAHKLDIAVIAEGVETLAQLRMLASFNCDYGQGYYISGPVNDEE 956 >UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW15_DESAC Length = 893 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 105/578 (18%), Positives = 210/578 (36%), Gaps = 53/578 (9%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---CTPYENDFIAGYLVPV 246 I+ + E+R +L V + L D+I + Sbjct: 317 ILESFIDIQARKLAEQALRESEQRYRSLYTAMREGVAIGELVYDAHGVACDYILHDVNRA 376 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL-------AFILAVLI 299 F + + +L + + + + ++ G+ EY L F ++V Sbjct: 377 FSEMLGVASEELVGHRASEFYHGAPPYIHILDEVVKYGIPKEYELPLSDLEKVFHVSVSR 436 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KS 351 ++ S+ + A D LT LPN ++ +Q Sbjct: 437 PEKERFACIINDVTDSKKAQQEIERLAYYDTLTGLPNRVLIKDRLQQAVAQAQRSRALVG 496 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ G+ ++ + + L +++ + + ++ G E +++++G +++ Sbjct: 497 VLALDLDHFKKINDSLGIGCGDQMLKLVSQRLKGHLRQGDSVARMGGDEFVILITGIKSQ 556 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + L + + + + LL Q+ Sbjct: 557 NDIVTAAGKILDLLAEPVTIDGHDLVSTGSLGISVYPTDADEVDLLLKHADTAMYQAKET 616 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 L ++ + +++ L + + AL + +L LY QP + G + +L Sbjct: 617 GRNL-YQFYSPDMNERAFERLFLDSDLHRALARNELELYFQPQIDLAQGHVVGAEALLRW 675 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTL 584 G ++P F+PL + +L V+E + R +VNL Sbjct: 676 NHATKGQISPVVFIPLAEESDLILDIGGWVIEEACRHARQWHDQGYTDLRVAVNLSARQF 735 Query: 585 LQKNIAGRIIRLFKRYHISPQ-------------AVILEITEEQAFSNAESSMYNIEQLH 631 ++ + R+ + E + + +L Sbjct: 736 RS-DLPDIVARVLHETGLPAHLLELELTESLLMER-------------PELARTILNKLR 781 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G ++IDDFGTGY++ LK D +KID FVKD+ + DA+IV +I LA Sbjct: 782 YLGNHLSIDDFGTGYSSLSYLKHFPIDRLKIDRSFVKDLNVDPDDAIIVEAIIALAHGLR 841 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+VVAE VET Q + + G +QGY++ RP P D Sbjct: 842 LNVVAEGVETSDQFEFMRQRGCDEIQGYVVARPMPADD 879 >UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A3Q8W6_SHELP Length = 1094 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 110/665 (16%), Positives = 247/665 (37%), Gaps = 37/665 (5%) Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLF------WLGLVTPIGIKCSMYLVGSFFDFPLK 152 A+ LG + LT L L + + + L Sbjct: 416 AWWALATEALGQMNQASLTLSNNIANLVQRQGREALSFLVLGIMAAMCNFLFLIVLGRLI 475 Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 ++ I +++ ++ T + + + + A + + + Sbjct: 476 VNNLVTRIGTIASLMQRMAQNTQLQLSVPVDG--RDEVAKMAMALNAMLSERQEANRELS 533 Query: 213 RAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLN 264 A + A +++ + I GY + + + + Sbjct: 534 LASAVFEYCAEGIVVTDKDNLIEAVNPAFTQITGYTLEEVKGRSPAVLNSHQQPHHFYEQ 593 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRR 321 + ++ + + + V+ V + + + + Sbjct: 594 MWQSLKQYGKWQGEIWNKRKNGQIFPEYLAITVVKDDKGRVVQHIGLFLDISNRKKYEQD 653 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRV 373 ++ D LT LPN + Q + + +D ++++ YG + Sbjct: 654 IWYKSNYDALTNLPNRQLYTSRLSQMLQLAEQRCCSVAVLFIDLDRFKYINDIYGHAVGD 713 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNN 430 ++ L L+++++ + +L G E ++V+ + +G ++ + N Sbjct: 714 ELLQVAAARLEALLEQHDFVARLSGDEFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINR 773 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 L + + N +++ L Q+ ++ ++ Sbjct: 774 NELLISASVGISCYPSNGTSVEVLTRNAETAMYQAKQDGRN-CFGYFSPDMNNNMLARIT 832 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L ++R+A+ Q + L+ QPI + EG + +L G++ PD+F+P+ + L Sbjct: 833 LEQSLRSAVLQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEETGL 892 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN---IAGRIIRLFKRYHISP 604 V++ L+ L ++N+ L + A + L ++Y ++P Sbjct: 893 IEPIGEWVIQQALRDLRQCHSQGIMINMAINVSGRQLAHGDPSHFACMLNGLLQKYDVAP 952 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 Q V +EITE ++ E S+ + + G I +DDFGTGY++ LK+ +IKID Sbjct: 953 QYVHIEITESILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDK 1012 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV +++ + DA ++++I + ++ + +VAE VE++ Q++ L LG ++QGYL+ +P Sbjct: 1013 SFVDNMLEDRADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKP 1072 Query: 725 QPLAD 729 PL + Sbjct: 1073 MPLKE 1077 >UniRef50_C4KCC9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4KCC9_THASP Length = 748 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 108/569 (18%), Positives = 202/569 (35%), Gaps = 36/569 (6%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVL--------------LLLLCTPYENDFIA 240 + + E+ L + + + L + + Sbjct: 157 TLERANKLMSQRLKDSERLHRYLVESSPDMIFTLDGSGRFTYINPRIKALLGYDRSALVK 216 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL-- 298 + + L +L + L ++ G +++ + Sbjct: 217 RPFTTLVMPEDLDRIDTLLSQPSSLPGESFHVELRLRSRRDGGGEGGSVTVSLTGIPMVT 276 Query: 299 ---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + L + R + QA D LT LPN + + Sbjct: 277 QENDRRVIGLYGVARDISERKRAEEIISFQAYHDQLTHLPNRVLFKDRLELAIAQAQRRT 336 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + ID + ++ +G +R+I L ++ + L +L G E ++L Sbjct: 337 GALAVMFIDIDRFKLVNDTFGHAEGDLLLRAIASRLSATLRRGDTLARLGGDEFTVLLPD 396 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + + F + T + L Q Sbjct: 397 INQPEDAEVIARKVLDALATPVRLSQGEFRATVSVGIALFPRDGTTAEDLTRHADAAMYQ 456 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDE 521 A + ++ + ++ L N +R A+ +G+L L+ QP + G + Sbjct: 457 VKRSGKN-AFRFFDPELNTRHRDRIALENDLRGAVARGELDLHYQPQVSLATRGIVGLEA 515 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLM 580 +L G + P F+ + + L + VLE+ LA + G PR S+NL Sbjct: 516 LLRWNHPGLGAIPPATFIQVAEEVGLISEISNWVLETACAQLARWQAEGVGAPRVSINLS 575 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + ++ GRI R+ ++P + +EITE + + L + G +AID Sbjct: 576 ACDFQRGDVVGRIRACLDRHGVAPSCLEVEITEGLMMDDTADIAAKVRALREAGISVAID 635 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY+ L+R +KID FV+D+ + I+ +IT +A+ L +VAE VE Sbjct: 636 DFGTGYSALAYLQRFPVSTLKIDRSFVRDL-EGPMTNPIISAITGIARGFDLDLVAEGVE 694 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L LG + +QGYL RP P + Sbjct: 695 NLEQADALRALGCEVMQGYLFARPAPAGE 723 >UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYS6_METML Length = 934 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 119/641 (18%), Positives = 229/641 (35%), Gaps = 32/641 (4%) Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 +R V W + I + + ++ + L ++ GD VV + L Sbjct: 278 ARAVSLANAWFVVFAGILLGTLLIVIILWQLRRLILNPIGGDPALAIDVV--KRIAAGDL 335 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL-----L 229 + L ++ S + R I +R + A + + + Sbjct: 336 AQDGLNAKPDTLMASVLEMRQKLRESIDTLRQNAERMRLSASVFDHAHDGIFITDPHANI 395 Query: 230 LCTPYENDFIAGYLV--PVFFIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVE 286 + Y I GY + I LG L++ W + + Sbjct: 396 VEVNYAFTQITGYTRNGALGRIPQELGFVTYDDSLLDVLWLQAESNSEWRGETWCRRKNG 455 Query: 287 TEYSLAF---ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y+ + + + + +++ + A DPLT LPN L Sbjct: 456 DVYAAWLDIFCVRDEANQVKNFVGLFSDITQAKEQQQNLERMAYHDPLTQLPNRALLSDR 515 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +Q + CCL +D + ++ G + + + + +++++ + + Sbjct: 516 LQQALARAERSGELLAVCCLDLDGFKPVNDTLGHEAGDYLLVQLAVRMSACLRDSDTVAR 575 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E ++L G ++ + L S + + + + F + Sbjct: 576 LGGDEFAVLLCGLQSIDECTQTLERLLSVIKTPYSIGDKSVTVSSSIGYTIFPDDGCEPD 635 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL Q+ + + Q + AL + LY QP Sbjct: 636 TLLRHADHAMYQAKLNGGSRVQQ-FDSHHDRQFRGLRQDRERVEAALSNQEFRLYYQPKV 694 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + + G + ++ + G+ +P FLP++ + S V+ L + Sbjct: 695 DLRQGKVVGMEALIRWEHPELGLRSPATFLPIVENTDFSIPLGEWVISEALGQIRVWQAA 754 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIE 628 + SVN+ ++Q N R++ L + ++P + LEITE A + I Sbjct: 755 GLDFQVSVNIAARHIVQSNFTERLVLLLAEFPEVAPHKIELEITETAAIEDVSGVANTIN 814 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 + G A+DDFG GY++ L+RL + IKID FV+D++ + D +V + L++ Sbjct: 815 TCKQLGVSFALDDFGVGYSSLTYLRRLPVETIKIDQSFVRDMLQDVDDLAVVAGVISLSR 874 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE VE +Q L ++G +QGY + RP P + Sbjct: 875 DFKRKVVAEGVENSEQGLWLLRMGCSVVQGYGVARPMPADE 915 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 91/471 (19%), Positives = 189/471 (40%), Gaps = 20/471 (4%) Query: 275 LNYNQNFLQGVE-TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 L+ + + + + + + + D LT Sbjct: 181 LSQEIRLSTKNGVRWHKIEVSHQPMTN---VVYLLTHDIQEERDHEVALYRLNNYDGLTH 237 Query: 334 LPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN L Q E + L +D + ++ ++G + I+ + + Sbjct: 238 LPNRNLLYQQLESALVNARKRHRQFGLLYLDLDGFKVINDNFGHRVGDELIQRVAERIKG 297 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWG 442 + + LY+L G E ++VL L+ + + S + + Sbjct: 298 SIPSSACLYRLGGDEFVVVLENTNEIEELESIAQSIMQNASNTYPVAKMEMMITASIGIA 357 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + + + LL ++ + H + E+ ++ + L +R A+++ Sbjct: 358 SYPQHADDVDNLLKNADAAMYRAKSTGHNM-YCVYEDHMADNINAHLTLGGGLRKAIEEE 416 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 +L+ QP ++ G + ++ + + G+++PD+F+PL + L V+ Sbjct: 417 QFILHYQPKIRLPDEIVVGAEALIRWVHPELGMISPDQFIPLAEESGLILPLGEWVIRRA 476 Query: 560 LKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + L + SVNL +Q ++ + R + + P+ + LE+TE + Sbjct: 477 CRQLQEWREAGLDPIKLSVNLSSRQFMQADLVDMVQRALEETGVDPEYLELELTESMLMA 536 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 +A+ S+ + K G ++IDDFGTGY++ LK+ +KID F+ D+ + + Sbjct: 537 DAQQSIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTLKIDRSFIHDLGLDCDNDA 596 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV++ +A + +L V+AE VE + Q +L+ Q +QGYL +P D Sbjct: 597 IVKATIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYLFSKPLSSDD 647 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 108/571 (18%), Positives = 198/571 (34%), Gaps = 31/571 (5%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIA 240 A K + L V + C + I Sbjct: 143 LERTRELRETNERLVEYQALLQEKNQFLEALVEGMPNPVFYKTLEGNYIGCNRAFSRLIG 202 Query: 241 GYLVPVF-----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + I+ ++ LT + + + L Sbjct: 203 RAPEDIVGRSVHEILPQEQACRVEDSGRRLTVQDDDGAGYSCMIDLRDAAGEDRVLVLYK 262 Query: 296 AVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---- 348 + + + + + QA D LT LPN L Q E A Sbjct: 263 SYFRDRTGQRAGEVGTFLDVSELKRKEAQIVHQATHDELTGLPNRMGLRQRMEDHALKGG 322 Query: 349 ---GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +DN + ++ G + +R++ L+ + + + +L G E +++L Sbjct: 323 PDARLAVLYLDMDNFKTVNDSLGHAVGDELLRAVAGRLVGMAPRRDMVARLGGDEFVVLL 382 Query: 406 S--GPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + + R + + L + + LL Sbjct: 383 PLSAEGDGELAETESARIQDSFTRPFNAADHELYVMPSIGISVAPEDGRDPATLLKNAEI 442 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGE 517 ++ + ++ T+++ + +IR L+ + +++ QP I + Sbjct: 443 AMYRAKEQGGAR-FRRFTQAMNDDVTRRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQVT 501 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 G + ++ + DG ++ P +F+P+ L +VL + R +V Sbjct: 502 GMEALVRWARPDGTLVPPLEFIPVAEDTGLVVALGERVLRDACIQTRRWTDELGPLRIAV 561 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ Q ++ R+ + P + LEITE + +S+ +E+L G I Sbjct: 562 NISARQF-QPDLLDRVQAALAESGLPPSQLELEITETTMMRDLPTSVAILERLAAQGISI 620 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTG+++ LK D IKID FV+D+ + DA IV +I + + SL+VVAE Sbjct: 621 AIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATIVSTIVTMGRNLSLNVVAE 680 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q L G + +QGY +P P Sbjct: 681 GVETDDQLGFLRAHGCREVQGYYYSKPLPAD 711 >UniRef50_Q2SPM3 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPM3_HAHCH Length = 826 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 119/646 (18%), Positives = 225/646 (34%), Gaps = 44/646 (6%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFF-DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 + +G+V + + +++ + PL D + L Sbjct: 171 VLIIGIVRNMVLVLLLFIAFYYMITRPLISLAASFSEVNPEDPGDRRLRLPRSHDGDELG 230 Query: 184 YYL---TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 Y + + + R+ E++ + L+ F+ Sbjct: 231 YLAQIGNQFLETLQKRLEERRQAEETLRDSERQTRQIIDTVP--HLIYAKDRNGAFVFVN 288 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 L + T G + +L + ++ N ++ + + + L + Sbjct: 289 QALASFYDRNITEIEGGDHHSLHHLISNLESVRFDNEDREVIDKQKVMFIPEHGLTDIYG 348 Query: 301 FSVCL---------------LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 L L + R A DPLT LPN Sbjct: 349 RRRILQSNKIPFRFFGKPCALIVSVDITDRVEAQSRVEQLAFHDPLTGLPNRNLFYDRLT 408 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 A + + +DN + ++ G + +R++ + L + E + +L Sbjct: 409 MDIARSRNHGAYGALLLIDLDNFKNINDSLGHSVGDELLRNVAKNLRNCLDEEITVGRLG 468 Query: 398 GSELLLVLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 G E +++ E E + + S +N + + Sbjct: 469 GDEFTVIMPELGRTPEEAEQNANLIAAKVLSELSTPFFFNTQEFTVTASMGVALYPDKDA 528 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + +L Q+ + + ++ +K++ + N +RTA+ L+ Y Q Sbjct: 529 NTEVILRYADTALFQAKHEGRNK-VTIFKAEMADAVSKRLSIENELRTAVKDKALMFYYQ 587 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + ++ G++TPD+F+P++ NL L + + Sbjct: 588 PQVSVTDGRIIGAEALIRWNHPQRGLITPDEFVPVLENSNLILTAGLDMFTQACMQVKEW 647 Query: 567 PCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + R +VN+ P Q +II + + + + LE+TE N + + Sbjct: 648 LDKGWWEEDMRVAVNVSPKQFYQPEFVEQIIEILEATRLPAYCIELEVTESVVIQNVKDT 707 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L G R ++DDFGTGY++ LKRL D +KID FV DI ++ DA IV +I Sbjct: 708 INKMLSLKGLGVRFSLDDFGTGYSSLSYLKRLPVDSLKIDRSFVTDINSDVNDAAIVSTI 767 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VVAE VET + L + Y QGYL +P P + Sbjct: 768 LAMAAHLDLEVVAEGVETVEHLEFLKENECDYYQGYLFSKPLPAEE 813 >UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYR2_RUBXD Length = 754 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 116/696 (16%), Positives = 223/696 (32%), Gaps = 36/696 (5%) Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 +L + L F + V G + V C L V Sbjct: 51 PGLLAAGVILLTYGGLLLFARRRVGAGERVEAVWTICVGLLLAALLMSAVQPGWLAVLAV 110 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + + + L+ F L + + A+ + + F L Sbjct: 111 TPLISVAVALPYVRGGDLLRLIFLAWLTVVVMAILSRALPPLSRPPAWFVDAFTAGALAA 170 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC------------- 231 +++ +A + E+R + L Sbjct: 171 ATAVVLLLLWQFSTRLNETLARTRAAEERYALAERGVNDGLWDWDLRRDRVYYSSRWKEM 230 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + D + F + +L LN + + Sbjct: 231 LGWREDEVGEEPDEWFRRVHPQDRKRLLEEVREHLR--GRREHLNVEYRIRHRDGSYRWM 288 Query: 292 AFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-- 346 + + R + + +A D LT LPN + + Sbjct: 289 LTRGLAVRDGEGNPVRMAGSQTDITRRKQAEEKLLHEASHDALTGLPNRAFFMERLGEAL 348 Query: 347 -----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G M + + L ++ + L +L G E Sbjct: 349 RRPGDGDRVAVLFIDLDRFKMINDSLGHAMGDRLLVAAAERLKGCLRPQDTLARLGGDEF 408 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++L G +E + + L + L + + LL Sbjct: 409 TVLLEGVSSEEAAS-VADRLLERLREPFRLDGYELFTAASVGVVLGGRERAGPEELLRDA 467 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--- 515 ++ A E + + + L N +R A+++ + + QPI + + Sbjct: 468 DIAMYRAKALGGGRK-GIFEAGMHTRAMELFRLENELRRAIEREEFTAHYQPIVSLKTGL 526 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---G 572 G++ ++ + G++ PD+F+P+ + L +L V+ L + + Sbjct: 527 ISGFEALVRWRHPERGLIRPDEFVPVAEETGLIVPLELSVVREACASLVSWQREFPQHRP 586 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 SVNL L + + ++ R+ + +++ LE+TE N S+ + +L Sbjct: 587 LTMSVNLSRNQLARPELPEQVERILLETGLDARSLRLEVTESAIMENVGSAAATLSRLRD 646 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 R+ IDDFG GY++ L +L D +K+D FV + D IV++I LA L Sbjct: 647 MNIRVHIDDFGMGYSSLSVLHQLPIDALKVDRSFVGRMDGANDDVEIVQTIITLAHNLGL 706 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VE ++ L +LG Y QG+L P A Sbjct: 707 DVVAEGVEREEHLDRLRRLGCDYAQGFLFSEPLDAA 742 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 139/675 (20%), Positives = 253/675 (37%), Gaps = 46/675 (6%) Query: 93 QTFVVLCACAILRWQLGTRWRYGLT-SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 F ++ A L R L R L GI ++ F P+ Sbjct: 11 VAFSLIVAILASYTALDMAGRVTLAKGREALSWLIGGAFAMGFGIWSMHFVGMLAFSLPI 70 Query: 152 KIS---------------------TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 + A+ + + L +L I M + + ++ Sbjct: 71 PLGYDLGLTLLSLLLAVGSSAFALWLVCQAELPWQRLALGALLMGSGIAAMHYTGMAALL 130 Query: 191 VSP--HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + P + + I ++ A +++ ++L + +V + + Sbjct: 131 MMPGIVYDPLWLGLSILIAVIASGAALWIAFRLRHGSRRIVLVRAGAALVMGCAIVGMHY 190 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM 308 L A + + ++A I++VL S + Sbjct: 191 TGMAAAQFPLG---SFCGAAGRGIDNGWLAVLVIVITLAVIAIALIVSVLDSRLEARTSV 247 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNL 360 + NR AL D LT LPN L+ EQ + + +D Sbjct: 248 LA--TSLARANRELIQLALHDNLTKLPNRMLLDDRLEQAIQQAIRDDRRFAVLFMDLDGF 305 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ YG + + + + ++ + + +L G E +L++ + Sbjct: 306 KAVNDAYGHHLGDLLLIEVAERIRANVRAQDTIARLGGDEFVLLIE-AREPADAATLAEK 364 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L S+ + + + + G+ +T L+ + Sbjct: 365 LVKRISQPYQISRHEVRISASIGIALYPGDGQTRHELMINADAAMYHAKDQGRN-GYCFF 423 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 E ++ +Q+ LL+ +R AL++ L+L+ QP N G + +L G++T Sbjct: 424 ESSMNANAQEQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMIGVEALLRWEHPQHGLIT 483 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRI 593 P +FLPL + L + VL+ + + +VNL L + + Sbjct: 484 PGQFLPLAEKTGLIVQIGEWVLDEACRQMRLWLDGGHADWNIAVNLSALQFAHAGLVDSV 543 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 R+ + P +ILE+TE A +A++S+ +EQL G I+IDDFGTGY++ LK Sbjct: 544 RNALLRHSLEPSHLILEVTESTAMRDADASLVILEQLSAMGVGISIDDFGTGYSSLLYLK 603 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 RL A +KID F+ ++ ++ DA IV +I L + +L +VAE VET+ QQ L +LG Sbjct: 604 RLPASELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVETEAQQEFLTRLGC 663 Query: 714 QYLQGYLIGRPQPLA 728 LQG+L+GRP P Sbjct: 664 NSLQGFLLGRPMPAE 678 Score = 73.5 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 33/328 (10%), Positives = 77/328 (23%), Gaps = 15/328 (4%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLS--ILFI 58 + I+++ F + + + + S + + + L Sbjct: 44 LIGGAFAMGFGIWSMHFVGMLAFSLPIPLGYDLGLTLLSLLLAVGSSAFALWLVCQAELP 103 Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 + + +L G + ++ L + + + I G Sbjct: 104 WQRLALGALLMGSGIAAMHYTGMAALLMMPGIVYDPLWLGLSILIAVIASGAALWIAFRL 163 Query: 119 RYVWQRLF----WLGLVTPIGIKCSMYLVGSFFDFPL-KISTFFGDADAIFTVVDLLSLF 173 R+ +R+ LV I Y + FPL G + L+ + Sbjct: 164 RHGSRRIVLVRAGAALVMGCAIVGMHYTGMAAAQFPLGSFCGAAGRGIDNGWLAVLVIVI 223 Query: 174 TAVLIYNMLFYYLTRMIVSPHF-------AQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 T +I L + + A+ + L Sbjct: 224 TLAVIAIALIVSVLDSRLEARTSVLATSLARANRELIQLALHDNLTKLPNRMLLDDRLEQ 283 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + F ++ F G L + A + + Sbjct: 284 AIQQAIRDDRRFAVLFMDLDGFKAVNDAYGHHLGDLLLIEVAERIRANVRAQDTIARLGG 343 Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHR 314 E+ L + +V+ + Sbjct: 344 DEFVLLIEAREPADAATLAEKLVKRISQ 371 >UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2I6_METRJ Length = 819 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 118/752 (15%), Positives = 231/752 (30%), Gaps = 32/752 (4%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + I++ F + + P + S + +A + + + Sbjct: 50 LLASGFSIGAGIWSTHFIGMLGYDPGVVLGYEPRTTLLSLIVAIAAATVAFLFARAMPSR 109 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 W G L +F + + L R Sbjct: 110 WAGAGAGLALGIGIACMHFLGIAGVRLPGHFTWDPALAATAIAAGCGLAAAGMAIHVGRA 169 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + V + I +L + + L + ++ Sbjct: 170 GARARLAAATVLTLAIAVLHFLAMAA--ARVVPDPALAVPQLGLARGVLAAGIAGMMAVI 227 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + F LT M+ + R K ++++ Sbjct: 228 LAFAALTLMLDHLRRINVALARQGRMLREKTLLLDATLDSMDQGLIMVDAGGVVRVCNER 287 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVST----------LCLLNYNQNFLQGVETEYS 290 + R + + Q + Sbjct: 288 ALALLDLPRAMMQARPSYRAVLRHEASRRERRRPDRSIRTWIERGEAGQTQVHERARPNG 347 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 L + + + + + A D LT LPN + Sbjct: 348 LVLEVRTVPLADGGFVRTFTDITKRKAAEAEVARLARHDVLTGLPNRALFHETLERSLAD 407 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 ++ + L +D + ++ G +R + L + + + +L G E Sbjct: 408 IVQRGGACAVLYLDLDGFKSVNDSLGHQAGDELLRRVAAGLRGIAGDGA-VARLGGDEFA 466 Query: 403 LVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + LS ++ + +G + +PL + Sbjct: 467 V-LSDGGAAEAGALAERLIALFDSPFSVGGHRVGVGLSVGIALAPEHGTDAEPLYRRADL 525 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GE 517 ++ A + + ++ +L +R ALD L L+ QP + Sbjct: 526 ALYRAKAEGRG-TYRIFTPAMDEEAEERRVLERDLRQALDDNTLGLHYQPQVDGHTGALV 584 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 G++ +L G ++P+ F+PL + L VL + A + +V Sbjct: 585 GFEALLRWTHPVRGSVSPNLFVPLAEETGLIVALGDWVLREACREAAQWAQ---PLKVAV 641 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL P + ++ ++ + +SP + LE+TE ++ ++ + +L +G RI Sbjct: 642 NLSPRQFQKPDLPETVLAILAETGLSPDRLELEVTESIIINDMARAVGILRRLKSYGIRI 701 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGYA+ L+ D +KID FV + T A+IVR++ L ++ + VVAE Sbjct: 702 SMDDFGTGYASLATLQAFPFDKLKIDRSFVAQLGTGPQAAVIVRAVLSLGRSLGMGVVAE 761 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q L + +QGYL GRP+P+ D Sbjct: 762 GVETHAQMKFLTEEACGEMQGYLFGRPRPITD 793 >UniRef50_B6R9S7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R9S7_9RHOB Length = 728 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 99/558 (17%), Positives = 196/558 (35%), Gaps = 20/558 (3%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA---GYLVPVF 247 V + L + + ++ + + Sbjct: 144 VEQQSKEALRDSREQLAQVIDSVPAMITTSTRDGLCAFSNAAWARFLNSTTAELVGEDTY 203 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-LAVLISFSVCLL 306 + R + L Q G + + L + ++ Sbjct: 204 GKFDKFTRERNRRLDRKVFITGRALPPYEIEQRNHAGDIFHFIVTKSPLLDAEGNTTHVV 263 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 + A D LT LPN L + ++ + + +D Sbjct: 264 TTATNISDRKRAEAHLLHIAHHDALTGLPNRTMLGERIDEEIFQCRNSGRSFALHFIDLD 323 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + + LL + ++ + +L G E ++ + ++ Sbjct: 324 RFKSINDALGHRTGDRLLEVLAERLLRCVDGSDLVARLGGDEFAILQTDLKSSEEAMRFA 383 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L S H + L ++ + + LL QS A Sbjct: 384 QHLVSVVEEPFHISGKELQTSASVGITKYPEDGLNSEELLRCADMAMYQSKADGGN-TFH 442 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 + + V L +R A++ L L+ QP + G + +L + D G+ Sbjct: 443 LFSTKMDHHVKETVALEAELRNAIEHDQLELFYQPQIDLRTNEIVGAEALLRWNRPDYGV 502 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAG 591 + P+ FL + L V+ + + PR +VN+ P ++N+ Sbjct: 503 VAPNVFLGTAEEVGLILPIGEWVIFAACQQAKKWMDMGLETPRIAVNISPTQFRKQNVPQ 562 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + + + +EITE +++++ ++ ++ + G I+IDDFGTGY++ Sbjct: 563 LLKDALVSCSLPADKLEIEITENIVLHGSDATVRDLREIREMGIAISIDDFGTGYSSLAY 622 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L R D +KID F +D++T+ + +I+++I L K+ LS++AE VET++Q L Sbjct: 623 LSRYSVDCLKIDRCFTRDMMTDPNNTVIIKAIVGLGKSLDLSIIAEGVETREQAEYLKDA 682 Query: 712 GVQYLQGYLIGRPQPLAD 729 G + QGYL G+P P D Sbjct: 683 GCEMAQGYLFGKPVPAED 700 >UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q2Y9Y0_NITMU Length = 756 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 98/527 (18%), Positives = 205/527 (38%), Gaps = 43/527 (8%) Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 L +F + + ++ +L ++++ L + + + Sbjct: 208 GDRLEKIFEAVHPEDMERVLREAADL-----PRGGVDHDYRLLLPDMSIRWVHSRTFPIK 262 Query: 300 SFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAG 349 + ++ ++ + + +++ + D LT LPN ++ Sbjct: 263 DSAGVHRIVGVMDDITQRKQADQQLLQVSRYDALTHLPNRILFYESLRKVIKQSEMNHRI 322 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 S L IDN + ++ G + +R LL ++ + + ++ G E +L + Sbjct: 323 VSVLFLDIDNFKNINDTLGFALGDELLREFSLRLLECLRVTDIVARIGGDEFGCILVSAD 382 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 G + + + + + + + + L+ QS Sbjct: 383 DLGNAGLVASKIREALRQPFDLQGHQVTVTASIGISVYPIDSIDADTLVKNGDTAMYQSK 442 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEIL 523 ++ + +++ N +R ALD+ + +L+ QP + G + +L Sbjct: 443 TAGRD-TYRFFTPEMNIRAIEKLDQENALRKALDREEFVLHYQPKVDLSNGWVTGMEALL 501 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPL 582 + + G++ P +F+P + Q L R V+ES+ + +A SVN+ Sbjct: 502 RWKRPEHGVVEPLEFIPALEQTGLITRVGAWVIESVCRQIAEWRHAGIGEIPVSVNVSGR 561 Query: 583 TLLQKNIAGRI--------------------IRLFKRYHISPQAVILEITEEQAFSNAES 622 + + + R + I + LE+TE +A+ Sbjct: 562 QFSRSTLNQDVIRATQANGIQPALLEFELQTERALRENSIDSDLLELELTESSLMMHAKK 621 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ +++L G +I+IDDFGTGY++ +KR D++KID F+++I TN+ DA I + Sbjct: 622 TVSILQRLKALGIQISIDDFGTGYSSLAYVKRFPIDVLKIDRSFIQEITTNSADAAITTA 681 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I D+A + + VVAE VET +Q L G +QG+ + P P + Sbjct: 682 IIDMAHSLHVRVVAEGVETAEQFDFLKGRGCDEVQGFYLSPPLPANE 728 >UniRef50_B0SAR7 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SAR7_LEPBA Length = 694 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 94/549 (17%), Positives = 206/549 (37%), Gaps = 30/549 (5%) Query: 210 KEKRAFTLSWLAALSVLLL--------------LLCTPYENDFIAGYLVPVFFIIFTLGV 255 ++++ ++ + + + + + + L + + Sbjct: 134 QQQKYKSIFDNLPMGIAITDEKGKIVETNKTARTYFDIQDGELLNRTLNIRKYTLIQPNG 193 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 K+ +L A+ ++ + + + + + L + Sbjct: 194 TKIYPRKSSLMRALRHKEVIRNLEIGMIKENKITWFDILATPIPIENFGLAVAFLDITQR 253 Query: 316 EWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHY 367 + A D LT LPN + E+A + +DN + ++ Sbjct: 254 RHAEEKIAYMAFFDQLTNLPNRNSLIDKLFPIFEEARRHGNLVGILAIDLDNFKIINDSR 313 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 G I+ + + ++ + + + G E +VL E + + Sbjct: 314 GHDFGDKIIKLVAYRIRESIRVYDLISRQGGDEFTVVLPDLSNERDAAVISESILDAMTH 373 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + + + LL + + E + Sbjct: 374 PFVIDGERIFVNISIGIALYPTDGKDSNTLLKNADSALNLAKSQGKN-CYVFFTEELQTV 432 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPL 541 +++ + N +R A+ + L QP + + G + ++ + G+++P+ F+P+ Sbjct: 433 VAERLEIENRMRIAIIENQFTLMYQPKIDLYTRKPVGVEALIRWRHPERGLISPNVFIPI 492 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + + V++S +K + K +VN+ + + I K Y Sbjct: 493 SEETGMILAIGEWVIKSAIKTMREWKDHGVKDISMAVNISTKQFKHERLISTIAENLKLY 552 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P + +E+TE NA++++ ++++ K G +IAIDDFGTGY++ LK+L + Sbjct: 553 KVDPHDLEVELTESSVMENADAAVRTMQEIRKLGAKIAIDDFGTGYSSLGYLKKLPISSL 612 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV +I T+ I+ ++++LA LSVVAE ET++Q LL + GV +QG+ Sbjct: 613 KIDRSFVSEITTDKDSKTIIHAVSNLAHNLGLSVVAEGAETEEQVRLLAESGVDQIQGFY 672 Query: 721 IGRPQPLAD 729 +P D Sbjct: 673 FAKPMTSED 681 >UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CH18_SHEPW Length = 1073 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 93/641 (14%), Positives = 217/641 (33%), Gaps = 41/641 (6%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 L ++ LV + Y+ S I + + L Sbjct: 421 LIVSSLYISFLSGVLVFYMVFILGKYIANSLISSITTIVNDVEEMAKDPNLQ-LNIEIKG 479 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LL 230 + L +M+ A+ ++ A + ++ +++ + Sbjct: 480 NDELTQISTALNQMLSERMLARTSLQQASA-----------VFEHSSEGIMVTNADNRIE 528 Query: 231 CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 I GY + + L +++T + Sbjct: 529 LVNPAFTKITGYTLEEVKGQKPSVLSSNHHQPEFYSQLWHSITTTNHWEGEIWNKRKDGN 588 Query: 288 EYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 Y + + + + + + ++ D LT LPN Sbjct: 589 VYPEYLSITAVENAQGQISQYIGLFLDVSNHKQYEQDLWYKSNYDSLTKLPNRHQFSSRL 648 Query: 345 EQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + + + +D +F++ +G ++ L ++ + + + Sbjct: 649 QHAIDGASQTNSQVAVFFIDLDRFKFINELHGHAAGNEILKQSATRLESVLGPEDSIARF 708 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++ + + + L + + + ++ + + + ++ Sbjct: 709 GGDEFVIISPQHNAIETAEQLAHKLVDVLVQPLKLDAIESNISASVGIAFYPEDGQDIEM 768 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL Q+ ++ + +++ L +R A+ + + L QP+ + Sbjct: 769 LLRNSETAMYQAKRDGRAH-FQYFSPEMNVEMLERMQLEQRLRKAVKKSEFYLEYQPVVD 827 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + ++ + GI++P F+P+ + L VL L L++ Sbjct: 828 MTHGTVSSVEALIRWRDPEFGIISPALFIPIAEETGLIEPLGEWVLNQALADLSSWHAQG 887 Query: 571 KGPRFSVNLMPLTLLQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + ++N+ + N + R+ I+ V +EITE + S+ + Sbjct: 888 HMLKIAINVSGRQCINSNGLSFYQVLEEALLRHKIAAHYVHIEITESLLIEDKPYSLEIL 947 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + + G I +DDFGTGY+ L + +IKID F+ + + DA +V++I + Sbjct: 948 QSIRNLGVDIYLDDFGTGYSALSYLNQFPISVIKIDKSFIDNATVSQSDAKLVKAIVMMG 1007 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +++VAE +ET++Q L LG Y QGYL+ +P Sbjct: 1008 QSLEMTLVAEGIETEEQWDFLQSLGCNYAQGYLMSKPLSSE 1048 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 109/563 (19%), Positives = 213/563 (37%), Gaps = 27/563 (4%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---I 249 +R A + + + ++L GY V Sbjct: 383 IAHDITRRKRIEADLRLAAAAFESQTAMLVTDANGVILRVNQAFLRDTGYAVEECVGQTP 442 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLL 306 + + ++ + + + + Y ++ ++ + Sbjct: 443 RILRSGRHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYI 502 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 + + + R H A D +T LPN L++ Q + +D Sbjct: 503 GLHQDVSERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLFVDLD 562 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GR 413 N + ++ G + ++ + L +E++ + +L G E +++S T+ Sbjct: 563 NFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSAAMQG 622 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + L S N F G QE+++ L+ Q+ Q+ Sbjct: 623 AEAAARYLLSELGRTFQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIYQAKGAGR 682 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKY 528 + + + ++ + +R A+++ LL+ Q + EG + +L Sbjct: 683 N-TVRFFDPSMEIALRERAAIEEALRYAIEEEQFLLHYQAQIGEDGRIEGAEVLLRWQHP 741 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQ 586 + G+++P F+PL + VL+ LA G +VN+ + L Q Sbjct: 742 ERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQLRQ 801 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + ++ + + P + LE+TE ++ E+++ ++ L G ++DDFGTGY Sbjct: 802 PDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTGY 861 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKRL +KID FV+D++ + D I S+ LAK+ L V+AE VET+ Q+ Sbjct: 862 SSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEAQRE 921 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 LL +G QGYL RP P+ D Sbjct: 922 LLAGIGCHCYQGYLFSRPLPIGD 944 >UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3A4_9BURK Length = 1083 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 109/598 (18%), Positives = 207/598 (34%), Gaps = 32/598 (5%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 + G + + V+ L + + ++ LW + S Sbjct: 468 WKGGKEPAWAVLSARRLRFQGRDAMLTAFAPINVLKVMEQRLELWAKVFEASSEGIIIMN 527 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + +++ + I L + P + A++ Sbjct: 528 AAQRIVSVNQAFCRSTHYDFYEVIGEQLGMLLDAPGESA------PGETIARALADKESW 581 Query: 276 NYNQNFLQGVETEYSLAFILAVLI-----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 F + Y +++ + + + + R A D Sbjct: 582 QGEVRFRRRSGESYPAWLMVSAVREGGKGGAVTNHIGIAIDITDRKRNEERIRFLAHHDV 641 Query: 331 LTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN Q + + +D + ++ G + +RS+ Sbjct: 642 LTELPNRSLCVQRLQAGLEQAARTGEQLAVLFIDLDRFKAINDTLGHHIGDGLLRSVAAR 701 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI----LNSRQIHWNNTGLDMGYG 438 L+ ++E + + +L G E ++V+ E ++ +V L + L + Sbjct: 702 LVQSVREGDTVSRLGGDEFVIVMRQVEGAQQVLRVVEERLIPLIRQSHPVEAHELSVSCS 761 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + L L+ + ++ +A + + + ++R A Sbjct: 762 VGIAVYPEDGADLDELMRRADAAMYEAKTAGRDMA-RLYSLETDRRVQARQAMEQSLRRA 820 Query: 499 LDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L++ + L+ QP + G + +L G + P +F+P+ + L V Sbjct: 821 LERREFALHYQPRMSARTGMPTGLEALLRWRHPSLGEVLPGEFIPIAEEAGLIRAIGAWV 880 Query: 556 LESLLKWLATHPCD-----KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 L+ A G SVNL L + I L R+ + + + LE Sbjct: 881 LDQACAQWAAWRASEAGGGLAGLPVSVNLSAAQLADPLLVPDIAALLARHGMPARCLELE 940 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE Q NA + + L + G +++IDDFGTGY++ LKR D +K+D F++D+ Sbjct: 941 ITESQLMDNAGVAQGQLAALKQLGVQLSIDDFGTGYSSLAYLKRFAIDKLKVDKSFIRDM 1000 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + D I R+I L + L VVAE VE +L L +QGYL R P Sbjct: 1001 LASPADMAITRAIIGLGRTLGLQVVAEGVEDAATLRMLESLDCDEVQGYLFSRALPPE 1058 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 110/604 (18%), Positives = 207/604 (34%), Gaps = 35/604 (5%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA--- 214 G+ D F + + A + R + +R+IA ++ Sbjct: 93 GEHDETFGLALGAVDYIAKSSPMAIVKARLRNHARLVMQERRLQREIAEHKAAREQLQVA 152 Query: 215 FTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIF--TLGVGKLRYPFLNLTW 267 + ++ +LL+ ++ + GY L G+ F W Sbjct: 153 GMVFSASSEGMLLVNADNRIVAVNPAFVALTGYGPEDVVGKDPKLLQSGRHGPAFYQAMW 212 Query: 268 AV-STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWH 323 A + EY+ + + + + + + + Sbjct: 213 AALEATGTWRGEIWNRRRNGEEYAEHLTINTIYDEAGKVHLRVALFSDITEKKASEALIE 272 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 Q+ D LT LPN R L + + + +D+ + ++ G Sbjct: 273 FQSCYDALTRLPNRRLLAERLALASERAHRDRGRVALLYIDLDHFKEVNDTLGHHQGDAL 332 Query: 376 IRSICRTLLPLMQENEKL--YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNN 430 + + + ++E+E + +L G E +++ E ++ + + S + Sbjct: 333 LVQVAHRVRRCVRESETVTVARLGGDEFTVIVPDFEGMDEVERLARAIIDSLSEPFRLGD 392 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + F + LL + + + + +V Sbjct: 393 QLAHVSASIGITVFPDDAADTDGLLRNADQAMYAAKRAGRN-GYQAFNPEMQRAMSMRVR 451 Query: 491 LLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L +R A+ G L L+ QPI + + +L + G ++P F+P+ Sbjct: 452 LSQALRDAVQAGQLRLHYQPIVELASGRVRKAEALLRWEHPEFGEVSPAAFIPIAEDCGS 511 Query: 548 SARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQK--NIAGRIIRLFKRYHISP 604 V E A + S+N+ P + + R + Sbjct: 512 IHCIGDWVFERAACQAARWRSRFGTDFQVSINVSPRQFQAGGRDFGRWLER-LGELGLDG 570 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE ++ + Q G +IA+DDFGTGY++ LK + D +KID Sbjct: 571 SMLALEITETLLMDTDQAIADKLAQFRAAGVQIALDDFGTGYSSLAYLKEFRIDYLKIDR 630 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+D+ ++ ++ +I +A L V+AE VET QQ ALL ++G Y QGYL RP Sbjct: 631 TFVRDMTPDSKSFLLSEAIVTMAHRLGLKVIAEGVETPQQYALLERIGCDYFQGYLFSRP 690 Query: 725 QPLA 728 P Sbjct: 691 LPED 694 >UniRef50_D1REK0 Putative response regulator, PAS/GGDEF/EAL domain-containing protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1REK0_LEGLO Length = 752 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 92/485 (18%), Positives = 175/485 (36%), Gaps = 19/485 (3%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 F + + L + V ++ + L + Sbjct: 260 FHEQIQKIQLNPETTEITTLQLKDGRFFECYSQLQKMNKKIVGRVWSFQDISERISLTAK 319 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRV 373 QA D LT LPN L + + + +D + ++ + Sbjct: 320 LEFQATHDALTELPNRILLFDRIHHAITHAQRINSLFAVIFIDLDRFKLINDSFSHAAGD 379 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVL--SGPETEGRLQHMVNILNS---RQIHW 428 ++ I L +M+E + + +L G E + +L + + + + + + + I Sbjct: 380 SLLKEISSRLKKIMREEDTIARLSGDEFIFILLSESLKKPEDIMAICDKILAAITKAITI 439 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + + + + L+ + A ++ Q+ ++ Sbjct: 440 SKREILITASMGISIYPQDGSNVDELIRNADLAMYNAKALGGNQ-YQFYSAKLNQQSLER 498 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + + +R AL +L L QP + + + ++ GI+ P F+PL + Sbjct: 499 LDKESALRKALLSNELYLEYQPQYDVKTEQLIAVEALIRWKHPKKGILLPMDFIPLAEET 558 Query: 546 NLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL + +VN+ +Q + + R+ + P Sbjct: 559 GLIVPIGEWVLRTACIQNKAWQDKGFPPFSVAVNVATKQFMQPDFVQMVKRVLNESGLLP 618 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + +E+TE N +I++L G RI +DDFGTG + L+ L D +KID Sbjct: 619 EYLEIEVTENILIRNIA-VTESIKELKNLGIRIVLDDFGTGNSCLSYLRALPIDQLKIDQ 677 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F+ DI N DA++V++I LA + S VVAE VE Q L LQGY +P Sbjct: 678 SFIHDIEENNSDALVVKAIISLANSLSFDVVAEGVENLLQVDFLKNQHCDKLQGYYFSQP 737 Query: 725 QPLAD 729 + Sbjct: 738 VSAEE 742 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 107/562 (19%), Positives = 196/562 (34%), Gaps = 23/562 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 Y R I + + + E + ++ + +AG + Sbjct: 237 YAFRDITQRLHDE---QGLKLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAEL 293 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV- 303 + +L + ++ A+ + + L ++ Sbjct: 294 VGQRLDRSLRLWANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGL 353 Query: 304 --CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + V+ + +R A D LT LPN L + + + Sbjct: 354 PFHYVGFVKDLSETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFAVL 413 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + ID + ++ G + + + + + ++ + + +L G E +L+L E+ Sbjct: 414 FIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHRVES-HG 472 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + L ++ + + + + ETL L+ H Sbjct: 473 AELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHVKEHGR 532 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 + ++ ++V + + +R AL QG L QP + G + ++ Sbjct: 533 GDC-CFYQRQMNVGLLERVRIDHAMREALQQGHFWLAYQPQIDLVSGLVIGAEALVRWND 591 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 D G + P +F+P+ + VL ++ A SVN+ Q Sbjct: 592 PDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIRLSLSVNVSATQFHQA 651 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N + + + P + LE+TE N E ++ +E L G R+AIDDFGTGY+ Sbjct: 652 NFIDLLAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDFGTGYS 711 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR +KID FV DI + D I ++ LA L V+AE VET Q+ Sbjct: 712 SLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETDIQRQF 771 Query: 708 LHKLGVQYLQGYLIGRPQ-PLA 728 L G QGYL P A Sbjct: 772 LLDAGCHEFQGYLCAPALEPAA 793 >UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UG16_METS4 Length = 990 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 111/696 (15%), Positives = 222/696 (31%), Gaps = 39/696 (5%) Query: 67 VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 ++ G + L Q A G + ++ A+L + + + Sbjct: 262 IVAGREALRVTTDRLRLAQEAAGAGLFDWSLIDGSALLSPETLRLFNLPEDRATRVTQAE 321 Query: 127 WLGLV----TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 W + P+ + V + ++ D + + + + Sbjct: 322 WAAAMHPDDLPVLAAETRRAVATGTTLRVEFRIPLPDGSDRWIMGTGRVMADGDGRAVRV 381 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YEND 237 + A+ + A E+R + + L T + Sbjct: 382 VGISI-DVTDRKRAEQARQASEAALRVSEERLALALESGSDGLWDCDLTTGTSWVSDQWL 440 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSL 291 + GY + + L A Q + + Sbjct: 441 TMLGYRKGELDAGYETWLRLLHPDDREAVLARVRDHLEGRTPSYECEQRMRRKDGGWAWI 500 Query: 292 A----FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 + + ++ + R A D LT LPN + Sbjct: 501 LERGKVVSRAPDGTARRVVGTHIDITARKEAEARVTHMARHDTLTDLPNRALFRERLEQR 560 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 L +D + ++ G + +R I R +++ + + +L G Sbjct: 561 LAEIRRHGGHCVLLALDLDAFKAVNDSLGHLAGDALLREIARRFRSVLRAEDTVARLGGD 620 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++L G + L + + + +G + E L Sbjct: 621 EFAILLGGTPRLESVMDFAERLVASVREPVTLEGQQVGVGVSIGIAIGPEHGEDADTLFR 680 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 ++ + E + ++ L ++ AL +G+ +L+ QP+ + Sbjct: 681 HADRALYRAKSDGRN-TFRFFEPAMDRAAEERRRLELDLQLALRRGEFVLHYQPVLDVAS 739 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 + + ++ G + P F+PL + L VL + + P Sbjct: 740 RAIVAVEALVRWNHPTRGQLGPGVFIPLAEETGLIVALGEWVLRTATRDARHLPE---HV 796 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R +VN+ + + ++ + +SP + LEITE ++ + L + Sbjct: 797 RVAVNISAVQVRHASLGQTVRAALDAAALSPDRLELEITESVLMGDSSLVRDALSGLREL 856 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +A+DDFGTGY++ L++ D +K+D F+ I + I+R+I L ++ Sbjct: 857 GTHLALDDFGTGYSSLSYLRQYPFDRLKVDRSFIASIP-DQGTVTILRAIVGLGTGLGMT 915 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V AE VET Q A + G +QGYL G+PQPL D Sbjct: 916 VTAEGVETPAQFAFVEAEGCAQVQGYLTGKPQPLPD 951 Score = 43.4 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 36/151 (23%), Gaps = 9/151 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS--WLAALSVLLLLLCTPYENDFIA 240 F I + R ++ A W LL T + Sbjct: 252 FLGTALDIEEIVAGREALRVTTDRLRLAQEAAGAGLFDWSLIDGSALLSPETLRLFNLPE 311 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNL--TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 V + + P L AV+T L ++ + V+ Sbjct: 312 DRATRVTQAEWAAAMHPDDLPVLAAETRRAVATGTTLRVEFRIPLPDGSDRWIMGTGRVM 371 Query: 299 ---ISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 +V ++ + + + QA Sbjct: 372 ADGDGRAVRVVGISIDVTDRKRAEQ--ARQA 400 >UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BUE4_DELAS Length = 692 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 103/550 (18%), Positives = 204/550 (37%), Gaps = 24/550 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIFTLGVG 256 E+R + + ++++ ++ +AGY + + Sbjct: 129 HHVAQKVRDSEERMRKFTEVTTEAIVMHRDGLIIDGNEALSRLAGYTLDELT-GRPILDY 187 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRS 315 L + + ++ + + + + +VR Sbjct: 188 ICPEFRLYALQYMRSGREDRFDGAIQHKDGHRIPVEIEAKTMPAEGEPYRIVLVRDITLR 247 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHY 367 + R A D LT LPN L Q Q + + +D+ + ++ Sbjct: 248 QLAQERMDFLAQHDQLTQLPNRVRLIQMLRQALSLASVKRRALAVLIIDLDHFKTINDSL 307 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILNSR 424 G + + + L ++ ++ + ++ G E ++VL+ + + Sbjct: 308 GHQAGDLLLCEVAQRLRGSVRAHDLVARVGGDEFVVVLTDDPDPQETETQASHLQRIIEA 367 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + T L + + G+ + + LL + + L GQ Sbjct: 368 PCAIDGTPLVISPCMGIAMYPGDGKNAEELLNRAESAMHMAKDSGR-RNLQFYAPAQDGQ 426 Query: 485 TTKQVLL--LNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFL 539 T+ +L +R AL++G+ LY QP + G++ ++ G++ P +F+ Sbjct: 427 ATQAQMLMQEQQLRGALERGEFELYYQPQTFTADGRLAGFEALVRWRHPQRGLVLPGEFI 486 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 L + D VL + + SVNL L Q+++A + ++ + Sbjct: 487 GFAEARGLISAIDHWVLREACRQARQWQDEGLAPVPLSVNLSALEFRQRDMAREVAQVLE 546 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + + +E+TE + ++ L G +AIDDFGTGY++ L+R + Sbjct: 547 ETGLEARWLHIELTESTLMHTSGQVQDTLQALQALGVGLAIDDFGTGYSSLAYLRRHPIN 606 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ D+ + D IV +I + + L +VAE VET Q ALL +LG +QG Sbjct: 607 QLKIDRSFIADVPDSEDDTAIVTAIVQMGHSLHLDIVAEGVETPAQLALLRELGCGMMQG 666 Query: 719 YLIGRPQPLA 728 YL+ P P Sbjct: 667 YLVAPPLPAE 676 >UniRef50_Q07XP4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07XP4_SHEFN Length = 829 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 108/572 (18%), Positives = 203/572 (35%), Gaps = 26/572 (4%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW------LAALSVLLLLLC 231 + + A+ + L + Sbjct: 236 AGVDGYLVTVVDVSEVKHAKQALYSEKERLRVTLNSIGDAVIATDTRGLITFMNPIAERM 295 Query: 232 TPYEN-DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 T + D + + V + + L P + + N + Sbjct: 296 TGWRLKDALHQKIEDVMHLKDSDTQQPLLNPLYLALRE-QRIVAMALNSLLTSRGGHVFY 354 Query: 291 LAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-- 345 + A + + + ++ + + + + A D LT LPN L+ Sbjct: 355 VEDSAAPIRNENGEMIGAIMVFHDVSEAMAMAMKMSHLANHDQLTDLPNRILLQDRLSVA 414 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + ID+ +F++ G I + R L L+ + L +L G Sbjct: 415 CSTARSYGTKAAALLIDIDHFKFLNDSLGHQYGDELICMMARRLRSLIPASYTLARLGGD 474 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++++S + + + L +N ++ F + + L+ Sbjct: 475 EFVILMSETRSVEASSQLASTLVEAMHEPFVLDNQKFNVSISIGVSVFPNDAVDAEELMR 534 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE- 515 ++ + ++ L +R AL +L ++ QP + + Sbjct: 535 HADVAMYRAKQEGRNR-FCFFSHDLESSLMERHHLETRLRKALINDELFVHYQPKIDLQT 593 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G + ++ +G +++P +F+PL + L QVL Sbjct: 594 NIIIGAEALVRLANDEGELISPAEFIPLAEESGLIIMLGKQVLNKACAEAKRWLEMGHTI 653 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 SVN+ ++AG I + +++ + LEITE +A + +L Sbjct: 654 PISVNVAAAQFADPDLAGMIKKALLDHNLPAHLLELEITETALMIDAADMQNKLSELISL 713 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +IAIDDFGTGY++ LK+ D++KID FVKD++ N D IV++I L K+ L Sbjct: 714 GIKIAIDDFGTGYSSLAYLKKFNVDVMKIDMSFVKDMLNNKHDYEIVKTIISLGKSMGLV 773 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 ++AE VET++Q L +LG QGYL RP Sbjct: 774 LIAEGVETKEQSHALVELGCFMGQGYLFSRPL 805 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 116/614 (18%), Positives = 219/614 (35%), Gaps = 32/614 (5%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR----MIVSPHFAQILWRR 202 P+ + L+L A + + Y R + + + Sbjct: 1 MMSPVHHQPVSPKLRKAHILAVGLALLIATVTLISMEYASLRRNMTVTMQIQMRIMAGNI 60 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY------ENDFIAGYLVPVFFIIFTLGVG 256 A G+ + A + A + + G L +F ++ V Sbjct: 61 AQALVRGEHEVASEVLASLAEAPEIDTAVLYDMQQNRFAEYVRPGSLSRLFDMMVADQVQ 120 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY---SLAFILAVLISFSVCLLYMVRIYH 313 + + W + +++ L ++ ++ V L + Sbjct: 121 RHSDMHKSEIWQPVVYGGMQVGMLYMRSNMKGLYRQLLWYVGTTVMVMLVTLFAAALLLS 180 Query: 314 RSEWL----NRRWHLQALTDPLTLLPNFRALEQA----PEQEAG----KSFCCLRIDNLE 361 R + R A D +T LPN A + E + +D+ + Sbjct: 181 RLQRAMLKAEERAGFLANYDTVTDLPNRHAFSRHFHLLLEGARHRRGVLALLVFDLDDFK 240 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI- 420 ++ G + + + + L+ + +Y++ G E ++L P ++ + N Sbjct: 241 VINDTLGHDVGDKLLHLVAQRLMVAAGKKNTVYRVGGDEFAMMLDQPADVENVEAVANRF 300 Query: 421 --LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + I N+ +G + + E LL + + Sbjct: 301 IRALAPPIVLNDRNFYIGVSIGASIYPYDGEDAAHLLRDADAAMYYAKSRGKN-NFQMFS 359 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTP 535 + +++ ++LL +R AL++ LY QP + + G + ++ G++ P Sbjct: 360 AEMHHKSSTRLLLETELRVALEEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCP 419 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+P+ + L R VL + R SVNL Q+N+ + + Sbjct: 420 SSFIPVAEETGLIVRIGEWVLREACRQAMEWKALGVPLRMSVNLSGRQFRQENLVQTMTK 479 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + +R + + LEITE +AE++ + L G +AIDDFGTGY++ LKR Sbjct: 480 IIERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYLKRF 539 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +KID F++DI + D I + +A + L VVAE VET+ Q L + G Sbjct: 540 PVSRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDM 599 Query: 716 LQGYLIGRPQPLAD 729 +QGYL RP + Sbjct: 600 VQGYLFSRPVSARE 613 >UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T198_ACIDE Length = 948 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 115/700 (16%), Positives = 233/700 (33%), Gaps = 41/700 (5%) Query: 55 ILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY 114 + ++F +R ++ L S + F + + LR Sbjct: 245 LGYLFLYRSIIQGTIEAPYRALARSEKSLKAVLDAVPDLMFEMTRSGRYLRVHTRVPGLT 304 Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL-LSLF 173 + R L L + + F + +L ++ Sbjct: 305 ERVPEQIAGRTIDEVLPPDAAGVVRTALTQAEATGHTQGQQFALEMTDGRHWFELSVARI 364 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT- 232 + F L+R + R + S+++ L Sbjct: 365 QDPGFADPRFVVLSRDVTQRMQDLDALR-----------KLRHAVEQTPHSIIITNLRGQ 413 Query: 233 ----PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + GY + + + Sbjct: 414 IEYVNPSFTTVTGYGSDEVMGRNPRMLGAGKTSAEVVAQMWERLLSGLAWKGELLNRHKT 473 Query: 286 ETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 E ++ + + + + R A D LT LPN Sbjct: 474 GREVWEYVSISPMRDEQGAITHYISVQEDISERKSNEERIRHLANFDALTGLPNRAMFSA 533 Query: 343 A--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 E + L +D + ++ G + + + L L+++ + + Sbjct: 534 RFSQALGLSQRSEGSLALLYLDLDRFKNVNDSLGYAVGDGVLIDVAHRLKALLRDEDTVS 593 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E L+VL T H L S+ + L + + + G+ + Sbjct: 594 RYGGDEFLVVLP-LTTAQGAVHFAERLHGELSKACQVESHALLVTFSVGIAMYPGDGSDM 652 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L ++ + Q+++ + + N +RTA+ QG++ L+ QP Sbjct: 653 EALTHHAEVAMYKAKEMGRDH-YCFFSADMQAQSSRLLRIENGLRTAIAQGEMSLHFQPQ 711 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 ++ G + +L + G++ P +F+P+ L VL++ L L Sbjct: 712 WRVHDRRMVGVEALLRWTHPELGVVGPAEFIPVAESSGQIIDIGLWVLDTALACLRRWRD 771 Query: 569 DKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 +VNL ++ + + +R + + + LE+TE A E ++ + Sbjct: 772 AGHTDLTVAVNLSLAQFRHPDLVEVVQKALQRAGVPAEVLELELTESIAMHEPEKAIACV 831 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L G ++++DDFGTGY+++ L+RL+ +KID FV+++ T IVR+I +++ Sbjct: 832 RALADLGVQLSLDDFGTGYSSFSYLQRLRVHRLKIDQSFVRNLDT-ARGMSIVRAIVEMS 890 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++ L+ +AE VET Q L L +QGY + RP P+ Sbjct: 891 RSLGLATIAEGVETPHQLEALAGLSCDMVQGYHLSRPLPV 930 >UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gammaproteobacteria RepID=B9ZNJ0_9GAMM Length = 706 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 107/577 (18%), Positives = 210/577 (36%), Gaps = 32/577 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--------------L 228 R + + R A E+ + + V + Sbjct: 117 LLATVRNALHKKDLEDANRHMRARLERSERLHRLIVNNSPDIVFILDRDGRFRFVNSRVH 176 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL-LNYNQNFLQGVET 287 L D + ++ + + ++ L L + Sbjct: 177 ELLGYSRQDLLDTRVLDLVETDDHEKAEYFFEQAGRSHAHIRSVELALKPREMARTRRYF 236 Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA---- 343 E ++ A + + R + + QA D LT LPN Sbjct: 237 EVAVWPTAASDDTGETLVYGTARDITDRKESEAFINFQAYHDLLTRLPNRALFRDRVDVA 296 Query: 344 ----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 Q + + ++ + ++ G + ++++ + LL +++ + L + G Sbjct: 297 IAQAQRQGHPLAVMFIDLNRFKVINDSLGHTIGDRLLQAVAQRLLGCIRKGDTLSRFGGD 356 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLL 455 E L+L + + + H L +G + +TL+ L+ Sbjct: 357 EFTLLLPQISRQEAAVDVAEKILESLNEPFHLGGDHELYVGASIGIAIYPEGGDTLETLI 416 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK- 514 + + + G T ++ L +R AL++ + + QP + Sbjct: 417 RHADIAMYREKNTGKN-GIRLFAPEMHGNTPHRLQLEQDLRKALEREEFHILYQPQVDGE 475 Query: 515 --EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + G + ++ D G++ P +F+P+ L D L + L + Sbjct: 476 TGQLLGVEALVRWNHPDRGMLGPAEFIPVAEDTRLIVDLDRATLRNALGDIRKAHQHVPN 535 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VNL P+ + + + ++ L + + +EITE S+ ++ + +L + Sbjct: 536 LRLAVNLSPVLIERDDFVDGVLGLLVETGFPAELLEIEITESLLMSDTHDTVAKLNRLCE 595 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++A+DDFGTGY++ L++L +KID F I T+ A IV +I +A+ + Sbjct: 596 AGVQVAVDDFGTGYSSLSYLQKLPVHTLKIDRSFTLTICTDGE-ACIVNAIVSMARGLQM 654 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++VAE VET QQ L +LG +QG+L G P PLAD Sbjct: 655 NIVAEGVETAAQQEYLRRLGCPMMQGFLFGHPSPLAD 691 >UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P569_9PROT Length = 751 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 121/728 (16%), Positives = 238/728 (32%), Gaps = 40/728 (5%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 L+ I+ F+ W M I FG+ G+ VL + + Sbjct: 25 LNSVFLLAGIVAFGMGFIRWQTSVAMGEID--FGFAGLCFVLLAYLRRHRSQADMFASIV 82 Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 V+ + + + +L + + ++ R+ G +++ + Sbjct: 83 LVLCYGLFLSIYISASYNTMRLSLFFLLAAAAFFLKGRI--------AGRIWLAFILLTI 134 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 + +F + + A+ I + + Q L R Sbjct: 135 VIV--HVLPYFETGYSHIDIFTTCLYLLALFIIFENYETFKESQHTSEEEQALLRLTEER 192 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLC------TPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + W Y + + +F II ++R Sbjct: 193 WRHALEGTGDAVWDWRPETGEFHYSRRFSEMLGYAEGELGKHAEHIFNIIHPDDEPRVRD 252 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA----FILAVLISFSVCLLYMVRIYHRSE 316 + + + + ++ + Sbjct: 253 ELHDFIQ--RRAGNYVSEMRLSARDGSWKWMLCRGKVAQRDDEHSAGLMVGTFSDITLLK 310 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYG 368 R+ A D LT +PN L +Q + C L +D + ++ G Sbjct: 311 QHERQLEHIAHYDALTGIPNRVLLADRLQQALAHSKREGTILAVCYLDLDGFKLVNDTMG 370 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 + + + + ++ ++ + +L G E ++L G +N L S+ Sbjct: 371 HEAGDKVLIEVTQRIKKSIRGDDTVARLGGDEFAVLLLGLHAPEECSASLNRLLEEISQP 430 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 I N ++ + G+ LL + + + Sbjct: 431 IEIKNRLFEVSASIGVSIYPGDDHDADTLLRHADQAMYTAKQSGKNRYY-LYDTENDQRA 489 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 L + AL + + LY QP + + G + ++ + G++ P FL I Sbjct: 490 RSHHEFLRRLALALGRNEFELYYQPKVDMRTLQLVGAEALIRWHHPERGLLAPGDFLHAI 549 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR-LFKRYH 601 L V+ + L L S+N+ L + A ++ R + + H Sbjct: 550 EGTTLEVELGDWVVATALAQLEAWHEAGLPMELSINISVRHLQANDFAWKLKRKMLRYSH 609 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + +E+ E A + IE+ K G A+DDFGTGY++ L RL D +K Sbjct: 610 LPKGCLQVEVLETAALEDIPRVSDTIERCRKIGISFALDDFGTGYSSLSYLGRLPVDALK 669 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F++D++ + D IV+ + LAK + +VAE VE+++ L ++G +Y QGY I Sbjct: 670 IDQSFIRDMLKDKGDRAIVQGVIALAKVFNRKIVAEGVESEELFRDLVEMGCEYGQGYGI 729 Query: 722 GRPQPLAD 729 RP P ++ Sbjct: 730 ARPMPASE 737 >UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSA6_PSYIN Length = 980 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 102/607 (16%), Positives = 218/607 (35%), Gaps = 30/607 (4%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 T+ + T ++ I + A+ Sbjct: 368 TLLEIPEEIIDTPFGSRTLYTKKIIITDEHNNPKFLLGISEDITERNAAKKALEESEHSL 427 Query: 208 LGKEKRAFTLSWLAAL------SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 ++ A S+L L +L + D+ + +I ++ + Sbjct: 428 RESQRIARLGSYLFDLRSNQWSGSEILDNLLGIDADY-QRTMEGWAQLIHPDDRSRIDHY 486 Query: 262 FLNLTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVLISFSVCLL---YMVRIYHRSEW 317 F N + + + + + + ++ + Sbjct: 487 FKEDVLNQKK--SFNQEYRMKRQNDQAVRWVHGLGELEFDNQGSPILMKGTIQDITERKL 544 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGL 369 A D LT LPN L+ A + L +D+ + ++ G Sbjct: 545 AEAHLQALANFDQLTGLPNRFMLKDKITYLFTLARRNNESLTMMFLDLDHFKNVNDTLGH 604 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQI 426 ++ + I + L ++E + + ++ E +L+ + ++ L S Sbjct: 605 VIGDRLLIEIAKRLKSAIREVDLVSRIGSDEFILLFPNTDA-DSALNIATKLIETVSLPT 663 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + L + + + E + L+ Q+ + E + Sbjct: 664 VFEHHELFITATIGIAIYPNDGEEFETLIKNADTAMSQAKRYSRN-TFHFFTEEMQVHLQ 722 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 +++ ++N +R AL + ++ ++ QP + G + +L + G ++P +F+P+ Sbjct: 723 RKLKIVNAMRHALLRNEMQVHYQPQISAVKGHIIGAEALLRWRHPELGDISPGEFIPIAE 782 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 VL + + + + +VNL L Q N+ G II + + + Sbjct: 783 SSGQIVAIGEWVLRTAIDQMKVWQNEGLAPMVVAVNLSALQFKQANLIGMIISMLNKAQL 842 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + Q + LE+TE + + ++ + QLH G R++IDDFGTGY++ LK+ + +KI Sbjct: 843 AHQYLELELTEAITMDDPQQAINIMNQLHAKGIRMSIDDFGTGYSSLSYLKQFKVYKLKI 902 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F+ ++ ++ D +V +I D+AK + +AE VET +Q L G +QGY Sbjct: 903 DQSFICNLARDSDDRAMVHAIIDMAKNLGMQTIAEGVETAEQLEFLRLHGCNEIQGYYFS 962 Query: 723 RPQPLAD 729 + P + Sbjct: 963 KAIPADE 969 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 112/541 (20%), Positives = 192/541 (35%), Gaps = 39/541 (7%) Query: 214 AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT--LGVGKLRYPFLNLTWAVST 271 + +L ++ + +V +F ++ G L P L A Sbjct: 266 YLFMWAGIPEQQILAPANLEWKINLSVMAVVILFSVLLARFFGQYTLVKPLAALAQASHN 325 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE--------WLNRRWH 323 + L + +R Sbjct: 326 FGQDQP------------WQLPSQYCQPAEIEQLSATFTTMTQRLENSRAIQLQSEQRLE 373 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT L N L Q + + +D + ++ G Sbjct: 374 HLATHDELTGLANRTLLLDRLDHAIEEGMRQHHAVAVLLIDLDRFQVINDSLGHDQGDRL 433 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTG 432 + I + L ++ + + +L G E LVL E L ++ L H +N Sbjct: 434 LCQIGKRLCQHVRSTDTVSRLGGDEFALVLGDLNNEESLIPLMQDLLKEISSPCHIDNHH 493 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + F + LL QS H ++ K + L Sbjct: 494 IVVTASIGISLFPNDGNDSITLLRNADLAMYQSKRHKGD--FTFYSSDMNQHAVKILELE 551 Query: 493 NTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R AL++G+LLL+ QP + + G + ++ G+++P F+PL + L Sbjct: 552 KDLRQALERGELLLHYQPKVSLQSGKIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIV 611 Query: 550 RFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VLE + + + +VNL N+ + + + + P + Sbjct: 612 PIGTWVLEQACQQAISWQQQQLPTITMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLD 671 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE + E ++ + L + G +++DDFGTGY++ L+R D +KID F++ Sbjct: 672 LEITESMIMDDPEGAVQTMIALKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIR 731 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D+ ++ A + SI D+A L+ VAE VET +Q L K LQGYL RP P Sbjct: 732 DVAQDSSSAAVAVSIVDIAHHLGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAE 791 Query: 729 D 729 D Sbjct: 792 D 792 >UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacteria RepID=A4C9D0_9GAMM Length = 1503 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 97/484 (20%), Positives = 195/484 (40%), Gaps = 19/484 (3%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLN 319 L + + ++ + + + ++ + + + ++ + Sbjct: 1007 LRIIAKLKAGEHFQSDEVVVTADGIAHPVIIKVSTVGDKDNNINNYIVVITDISEQKDAE 1066 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + + A D LT LPN L + + + +D+ + ++ G + Sbjct: 1067 KELRVLANYDTLTKLPNRSLLLDRISHATELSRRHKNRLALLFIDLDHFKQVNDTLGHDL 1126 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 + ++ + L +++ + + +L G E ++++ +T L + + + Sbjct: 1127 GDTLLITVAQRLKYGLRKQDTVARLGGDEFVILIEDIDTIDELIPVCRKICEEVSLPVQL 1186 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N + + F + + LL + + ++ + ++ Sbjct: 1187 GNHRMTVEPSIGVAIFPDDADNSLDLLKSADIAMYHAKKRGGA-TYQFFHQEMNHKIQRK 1245 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 V L N ++ A+ + Y QPI + +G++ +L + + +++P +F+P+ Sbjct: 1246 VQLENELKEAVKLNQFVNYYQPIISATDFTLKGFEVLLRWRQDNK-LISPAEFIPVAESM 1304 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L L ++ L K SVNL + I ++ + + ISP Sbjct: 1305 GLITTLTFAALTRAMQDLKAWLVSKPDCYVSVNLSARDFEHETIGEKLTDIILQADISPT 1364 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 V+ EITE +++ ++ + L + G RI +DDFGTGY++ LKR D++KID Sbjct: 1365 QVVFEITESALMQDSQKALEAMLILKQKGCRIYMDDFGTGYSSLSYLKRFPIDVLKIDQS 1424 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV DI + D I+ S LA + S VAE VET+ Q L LG YLQGYL +P Sbjct: 1425 FVADIGQDASDEAIIHSTLALAHSLGKSCVAEGVETKAQVEFLQMLGCDYLQGYLFSKPV 1484 Query: 726 PLAD 729 P + Sbjct: 1485 PSNE 1488 >UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5S7_9DELT Length = 857 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 102/576 (17%), Positives = 192/576 (33%), Gaps = 33/576 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIA 240 L R + EK+ T+ A + L I Sbjct: 271 LLRANTQLKIEIAERKVIGDALRKAEKKYRTIFENALEGIYQTSPSGRFLSANPSLARIL 330 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN-----FLQGVETEYSLAFIL 295 G+ + +G Y L + ++ Sbjct: 331 GFKSADEMMGSVYDIGTQMYLEPGRRKEFLRLIEETGEVKNFVSKVRRRDGRIIWISENA 390 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------- 345 + +C V + + QA DPLT LPN Sbjct: 391 RRITDADGSVMCYEGSVEDITLRKKAEDQLKRQAFHDPLTGLPNRALFLDHLRMAMERGR 450 Query: 346 -QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + + +D + ++ G +RS+ R L + + + + G E ++ Sbjct: 451 RRRHLFAVIYMDLDRFKVINDSLGHETGDELLRSVARVLEKCGRSVDTIARFGGDEFAIL 510 Query: 405 LSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + + + + N + + + LL Sbjct: 511 IEEISASRDAIAIARRILDGVRQPFTINGNEVFTSASLGIVLKTDGYDRPEALLRDADTA 570 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 ++ H + + Q + + L +R A+D + + QPI + G Sbjct: 571 MYRAKEHGKSR-FKVFNQKMHDQALRLMALETDLRRAVDLREFEVAYQPIVCLDTRRVCG 629 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-----DKKGP 573 ++ ++ + G++ P F+ L L D VL + + + Sbjct: 630 FEALVRWRHPEHGVILPGDFISLAEDTGLIYAIDNFVLVAACAQVKLWQTTFGHLMGELL 689 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 ++N+ Q + ++ R ++PQA+ +EITE N + ++QL Sbjct: 690 TLNINISGKHFGQPMLLSQVTRALDDSGLNPQALNIEITESALMDNPAVAEEVLKQLKSL 749 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++ IDDFGTGY++ L+R D++K+D F+ + N IVR++ L ++ L Sbjct: 750 GAKVCIDDFGTGYSSLSYLQRFPIDVVKVDRSFIDGVEGNLDSQAIVRTVFSLGESLGLK 809 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +VAE VET Q A L G +Y+QG+L RP + Sbjct: 810 IVAEGVETPAQLAFLENEGCRYVQGFLFYRPLSATE 845 >UniRef50_D1U433 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U433_9DELT Length = 849 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 104/603 (17%), Positives = 214/603 (35%), Gaps = 31/603 (5%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 T++ + L + + ++R + R + E+R T Sbjct: 194 LAGYRNRLTILFVSILLIVAGLEFYVLRQISRSAREKAKIRQQRERLLEALRTGEERYRT 253 Query: 217 LSWLAALSVL------LLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTW 267 ++ A + +L C+P F ++ + V + R + Sbjct: 254 IADFAYDWEIWLGTEGGVLYCSPACERISGHPPERYFEQPELLREIIVSEDRDAWDKYLL 313 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHL 324 ++ + + + L + + + R + + + Sbjct: 314 FINNEVGGSLDFRIVTRSGQTRWLCVAGRAVSGIGMKPLGIRCSFRDITDRKEMEEQLRH 373 Query: 325 QALTDPLTLLPNFRALEQA---------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 QAL DPLT L N + + L +D + ++ G Sbjct: 374 QALHDPLTELANRTLCLDRVGQAMRRAGRRENYYFALVFLDLDRFKVINDSLGHRFGDLV 433 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 + L ++ + + + G E +L+L + G +V + ++ + Sbjct: 434 LMETANRLAQHVRTLDTVSRFGGDEFVLLLDELASPGEAIRIVKRIRDALAKPFIFTGHE 493 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + +L + + Q+ + Q+ + Sbjct: 494 VQTTASFGIVLSPIPDIRASDVLQRANIAMHQAKEAGRNR-FKVFTTRMLESAVDQLTME 552 Query: 493 NTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R L+ G+ + QPI + + G++ + + G + P +F+P+ + Sbjct: 553 NDMRRGLESGEFHVQYQPIMDLDGSDIMGFEALARWDHPERGPIPPAEFIPMAEESGTII 612 Query: 550 RFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 + VL L LA SVNL + + +I + + P+ Sbjct: 613 KLGEWVLRESLLTLARWRAATPGAQDIFMSVNLSSKQFARMELDKLVIDALRAADLPPEV 672 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE + ++++ +++L K G R +IDDFGTGY++ +L++L D +K+D F Sbjct: 673 LKLEITETALMEHPDAAINVLKRLRKIGVRFSIDDFGTGYSSLSQLQQLPVDTLKVDRSF 732 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + + ++ + IVR++ LA + L VVAE VE Q L +L + +QG+ RP Sbjct: 733 ISRMKSDPENMEIVRAVIALAHSLGLDVVAEGVEDAGQLCSLMELKCESVQGFYFHRPLS 792 Query: 727 LAD 729 D Sbjct: 793 PTD 795 >UniRef50_Q2BJI5 Regulatory component of sensory transduction system n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJI5_9GAMM Length = 872 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 108/659 (16%), Positives = 233/659 (35%), Gaps = 35/659 (5%) Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 ++ + + + + +L + + P+ + A+ Sbjct: 199 TQFLIFSLAAMLILVGLMLNFTRYLSGRVSFLHAAFTRVSSGYIHDPIDVRGSDELAELA 258 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL-----WRRDIAPSLGKEKRAFTLS 218 + + + + V Q+ +++I L E+ LS Sbjct: 259 VAFNAMQDKIASREKALLKAREELELRVEQRTNQLQEINFQLQQEIDVRLRAEENLRVLS 318 Query: 219 WL---AALSVLLLLLCTPYE------NDFIAGYLVPVFFIIFTLGVGKLRYPFLN--LTW 267 + +S+++ + E D + + FT P L+ L Sbjct: 319 QAVSQSPISIIIAGVDGGVEYVNQAFTDCSGFSVEEIKGNDFTFLNNLDSQPELSKELWD 378 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHL 324 A++ L+ Y ++ + L + + ++ Sbjct: 379 AINNGQEWRGELANLRKNGQRYWEYTHISPVTDETGQITHYLIIKNDITERKEQEQKIIH 438 Query: 325 QALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT LPN + + +D + ++ G + + Sbjct: 439 QAHFDSLTELPNRSLAMDRLAQGVIKASRNNDVLALMFIDLDGFKNVNDSLGHDIGDQLL 498 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGL 433 + L ++ + + +L G E L+++ G + ++N + + + L Sbjct: 499 IHASKRLSDSVRNTDTVARLGGDEFLIIMEGLVSRRDCLPVLNKIKESFGAPFNIGSNEL 558 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + F + + LL Q+ + + +++ + N Sbjct: 559 KVTPSIGLSLFPDDGQDGDVLLRNADLAMYQAKEAGRN-THHFFNQEMHKNLRRRLEIEN 617 Query: 494 TIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 ++ AL++G+L L QPI + G + ++ G + PD+F+ + Q L Sbjct: 618 QLKHALEKGELFLLYQPIVEAKTYELKGLEALIRWDNELLGRVMPDEFISVAEQSGLIIP 677 Query: 551 FDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 ++ +L + + S+N+ P + +++ I ++Y + +IL Sbjct: 678 IGNWLVNEVLAQMKCWHGSVLEDIAISINVSPRQIQDQSLQPLINDALEKYSFTASKLIL 737 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE N + N+++L G ++A+DDFGTGY++ LK DI+KID FV+D Sbjct: 738 EVTEGLLIRNPLEAKSNLQRLKDLGVQLAMDDFGTGYSSLSNLKNFPFDILKIDRTFVRD 797 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I + D +V + + + L +VAE +ET+ Q +L + +QG+ RP Sbjct: 798 IEKDDDDYALVSAAVSMGRGLGLRIVAEGIETKNQLEILSDMQCDSVQGFYFSRPLSAE 856 >UniRef50_Q21ZG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=Q21ZG9_RHOFD Length = 731 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 94/562 (16%), Positives = 187/562 (33%), Gaps = 33/562 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFFIIFTLG 254 + + A E+R V + + I GY V + Sbjct: 154 YVQAQATLQKNEERWKLALESTGDGVWDWHIQSGVEFYSKRLLEILGYDVGDVHLQARGE 213 Query: 255 VGKLRYPFLNLTWAVSTLCLLNY-------NQNFLQGVETEYSLA----FILAVLISFSV 303 KL +P + + + + I + Sbjct: 214 FDKLIHPDDMAQLLRARQAHFDGLTSTYADEHRVRCKDGSWKWMLSRGMVISRDAQGLPL 273 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 ++ + QA D LT LPN L + + Sbjct: 274 RMIGTHTDVTERKKSEALIWRQAHFDTLTGLPNRHMLRDRVAQEIKKSKRDGLQLAVLFI 333 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ G + R + ++E++ + ++ G E ++L+ L+ Sbjct: 334 DLDHFKEVNDTLGHNSGDRLLVEAARRISDCVRESDTVARMGGDEFAVILTELLDASSLE 393 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ + + + + + ++ L + Sbjct: 394 RILQKILRALECVFQLDGEQAFVSASIGVTMYPLDAGDIEDLFKNADQALYVAKGAGRNR 453 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + +V L N + L L QPI + + ++ Sbjct: 454 -FSFFTPALQQAAQNRVRLANDLHAGLIGQQFRLVYQPIVELASGAVCKAEALIRWQHPT 512 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKN 588 G+++P +F+P+ L V + + + + SVN P+ Q+ Sbjct: 513 RGLISPVEFIPIAEASGLIVAIGEWVFQQAARQVQAWRTALDPDFQISVNKSPVQFYQRG 572 Query: 589 IAGR-IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + ++++EITE + S + LH G ++++DDFGTGY+ Sbjct: 573 KTKTPWAQQLQAMGLPGNSIVVEITEGLLLDTSSSVADQLLDLHDAGIQVSLDDFGTGYS 632 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+R D +KID FV+ ++ + D + ++I +A A + V+AE VET QQ+ L Sbjct: 633 SLSYLQRFDIDFVKIDQSFVRYLIPESTDLALCQAIIAMAHALGMKVIAEGVETAQQRDL 692 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G Y QGYL +P D Sbjct: 693 LAAAGCDYGQGYLFSKPVSAPD 714 >UniRef50_C6N027 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N027_9GAMM Length = 505 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 92/443 (20%), Positives = 181/443 (40%), Gaps = 16/443 (3%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 ++ R + L ++ QA D LT LPN + Q + Sbjct: 54 ITGRIWSFRDITQRVILEKQLKYQATHDSLTGLPNRVLMLDRLGHVLDKAKRQNTLFAVI 113 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 +D + ++ G ++++ + L +++ + L +L G E ++++ + E Sbjct: 114 FFDLDRFKLINDSIGHDTGDELLKTVAKRLEFMLRGTDTLARLGGDEFIVIVDNIKNEFD 173 Query: 414 LQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + L L + A F + +T+ LL Q+ Sbjct: 174 AGTVATHLLESFNSNFEIAGQSLSVCSSAGISIFPRDGKTIGELLRNADAAMYQAKNSGG 233 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 + Q ++ +L N + A+ + ++Y QP + ++ + ++ Sbjct: 234 NQ-FQFYTAELGTQIKEKFVLENELHDAVLNNEFMIYYQPQFDITTQKISSVEALIRWNH 292 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQ 586 GI+ P F+P + L L++ + R +VN+ + Q Sbjct: 293 PKRGILLPIDFIPAAEETGLIIPIGEWTLKTACEQNKKWQDAGFLPMRVAVNISLKQIKQ 352 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + +I + +SP + LEITE + E ++ ++ +L+ G I +DDFGTG Sbjct: 353 FDFVQKIKGILDSTGLSPNWLELEITENVLLNAIELALSSLPELYAMGIHITLDDFGTGT 412 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+++ D +KID F+ +I NT D +I++SI LAK +L +VAE VETQ+Q Sbjct: 413 SSINYLRKIPLDRLKIDQSFISNINLNTSDEVIIQSIISLAKKLNLKIVAEGVETQKQLE 472 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L + +QG+ +P ++ Sbjct: 473 FLQSNHCEEVQGFYFSKPVAPSE 495 >UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria RepID=B3PID2_CELJU Length = 844 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 107/585 (18%), Positives = 217/585 (37%), Gaps = 37/585 (6%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 L +++ + R E+ + + + + Y Sbjct: 245 LAQLIASFNQLLDVVELSLAKRRAVELALRKSEEHLRQIIDHLPVMIGARNIAGYY-LFA 303 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY------------NQNFLQGVE 286 + + + +R N + + T+ +Y + F+ Sbjct: 304 NKALANELGYTPEQMRNLHVRQLLKNSVFDIDTMLQNDYRVIRGNEELDVIEERFITASG 363 Query: 287 TEYSLAFILAVLISFSVCLLYMVR-IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 + L + L + + +V + + A D LT LPN L + Sbjct: 364 KQLFLQTHIMPLAFYDEKVALIVSVDITERKNAQAKMEFMAHHDALTGLPNRVQLVERLE 423 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + +D + ++ G + + + L ++E + + +L Sbjct: 424 HELRRAERHGYYGAVLFIDLDQFKNINDSLGHPVGDKVLEVVATRLQQSVREEDLVARLS 483 Query: 398 GSELLLVLSGPET--------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 G E ++VL+ + G + + + S+ +++ L + + Sbjct: 484 GDEFVVVLTVLDQNMETAALRAGEISEKIRSIISQPYVYDSMELRVTCSVGVVVYPDKNN 543 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 ++ LL Q +++ E ++ + ++Q+++ + AL++G LY Q Sbjct: 544 SVHELLRYADTAMYQVKEKGRD-SIEFFNEEMADKVSRQLVMEGDLHRALEEGQFELYYQ 602 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + +L G+++P F+P++ + VLE K L Sbjct: 603 PKMDVISSRVVGAEALLRWKHPTKGMVSPVDFIPVLETSGMIIDVGQWVLEDACKTLVKW 662 Query: 567 PCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 G + S+N+ P + +I +R+ I P ++ +EITE E + Sbjct: 663 SEQGLWHEGMKLSINISPRQFRRAAFVQDVIDTIERFPIPPNSLDMEITEGIVIQRVEDA 722 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L G ++DDFGTGY++ LKRL +KID FV+DI+ + D ++V +I Sbjct: 723 IATMTLLSDKGISFSLDDFGTGYSSISYLKRLPVSTLKIDQGFVRDIIVDRNDRVLVETI 782 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + +VAE VE +Q A+L G + QGYL P LA Sbjct: 783 ITMGNLLDMELVAEGVEEAEQLAILKAFGCHFYQGYLFSMPVELA 827 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 88/461 (19%), Positives = 167/461 (36%), Gaps = 21/461 (4%) Query: 285 VETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + + ++ ++ R R H A D LT LPN Sbjct: 475 NGNTWFIHVRIVPEFGEQGQVIGVLAVERDITELMEYRERIHYLAYYDALTGLPNRTLFA 534 Query: 342 QAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 E L +D + ++ G + ++ + L ++ + + Sbjct: 535 DRVNQVLADASWHEQRFGLMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYDTI 594 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E ++L L + + ++ ++ L + + + + Sbjct: 595 ARLSGDEFAILLPELRNPDDLATIARKINDEIAKPFLIHDKELFISTSIGIAIYPDDGDD 654 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 L + + + + ++ ++L +IR AL + L+ QP Sbjct: 655 RATLFKSADVAMYHAKNYGRN-NYQFYSRELGSKASEYIMLGASIRQALKNAEFELFYQP 713 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW---LA 564 + E G + +L G++ PD+F+ + + L VL L Sbjct: 714 QVDLMSGEIVGAEALLRWRNPQLGVVMPDRFIKVAEESGLIVEIGEWVLREACSAVVCLN 773 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + D +VNL L ++ + + P+ + LEITE +++ + Sbjct: 774 RYRPDDHPLSMAVNLSSRQFLYNDLLASVKDILAETGCKPEWLKLEITESLLLEDSQEII 833 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + + G I+IDDF TGY+ L + +KID FV+DI ++ +I Sbjct: 834 STLSTFKEMGITISIDDFCTGYSAMSYLGQFPISQVKIDRSFVRDIAAKQDKLELITAII 893 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +A A L +VAE VE++QQ LL G QGY G+P Sbjct: 894 RIAHALRLELVAEGVESKQQANLLKIQGCTIAQGYFFGKPM 934 Score = 45.8 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 34/142 (23%), Gaps = 6/142 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 +TR I + R+ + + WL LL +F Sbjct: 249 ITRDISHIRRVERELRKRERYQSALIENFPFVVWL-KDLNSKLLAANSAYAEFAGVASKD 307 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ---GVETEYSLAFILAV--LIS 300 + L+ ++ L + + LQ + + + + Sbjct: 308 ELEGKTDFDLFPLQDARTHVEGDKRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPMVVDG 367 Query: 301 FSVCLLYMVRIYHRSEWLNRRW 322 + + R + + Sbjct: 368 KVMGTVGFFRDITDIKQNEEKL 389 >UniRef50_Q2RTE0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTE0_RHORT Length = 886 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 118/702 (16%), Positives = 228/702 (32%), Gaps = 46/702 (6%) Query: 47 MPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRW 106 + L +L+I R ++ G + + Sbjct: 186 VARAFGLPLLWIGVPRPEGLLVVGKGGSEAARLSAYPEGRGDEGTQGVAGRTLRSGRAQS 245 Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFP-LKISTFFGDADAIFT 165 T + G+ + G L+ Sbjct: 246 DDAGEGWAAPT--------WAPGVPLGRAYCVGLRARGEVVAVLCLRGHGEAPSPALSRA 297 Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + L + + Y + ++ A I + E R ++ Sbjct: 298 LEAL-----GPRLGEAIVYERGQSLMRLQSAAIAAAANAIVITDGEGRVEWVNE------ 346 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 L + YE D I G L V G + + + + Sbjct: 347 -AYHLLSGYERDQIIGTLPAVL-----AGPSAANPTAIEAWPTLRAGQVWRGEIHETHRD 400 Query: 286 ETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 Y + + ++ L+ + + R + D LT LPN Sbjct: 401 GRTYIVDKTITPIVDASGRLSHLVAVDEDVTARKKAEERIRYLSNYDTLTRLPNRVLFRD 460 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 G + + +D ++ G H + +I + +E + + Sbjct: 461 RLYQAVVQARRGHGGLAVMFIDLDQFSLVNDTLGHAAGDHLLMTIASRINAAAEEADTVA 520 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E L+ + + + L + + +G + + Sbjct: 521 RVGGDEFALIQTALTSADSAASLARRLIDVIRTPVDLGGREVVIGANVGIAIYPQDGTDP 580 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ-GDLLLYAQP 510 L+ ++ ++ + ++ L +R ALD L L+ Q Sbjct: 581 DNLMKNADMAMYRAVKSGDDSC-CFFSNEMNAEAAVRLSLEEDLRRALDSGDQLFLHYQL 639 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + + G + P +F+P+ L VL + L A Sbjct: 640 QFCIESGRPVGAEALARWTHPTLGAIPPTRFIPVAEDSGLILALGDWVLGTALAEYARWR 699 Query: 568 CDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 G +VN+ + QK + R+ L ++ + P+ + LE+TE +A+ ++ Sbjct: 700 AAGCGRLTIAVNMSAVQFRQKGLVERVTDLLAQHGVPPEDLELELTESMLMQDADQAVAQ 759 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L + G R++IDDFGTGY++ LK + D +K+D FV+D+ + DA+I R+I +L Sbjct: 760 LTALSQAGIRLSIDDFGTGYSSLGYLKLFRVDKLKVDQSFVRDVTEDGNDAVIARAIINL 819 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L V+AE VET +Q A L + G +QGYL+ P+P Sbjct: 820 GHSLGLEVIAEGVETPEQMAYLRREGCDVVQGYLMAYPEPGE 861 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 103/562 (18%), Positives = 188/562 (33%), Gaps = 28/562 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 + I A+ R + + I GY Sbjct: 330 VQDITERRQAEDEMRLAASVFDNSLNAILIADANGRI------RKVNRAFTAITGYTAEE 383 Query: 247 FF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---S 300 + + + + S+ +A + Sbjct: 384 AVGDTPRLMKSGLHSPGFYGEMWAELQACGKWDGELMNQCKDGRIISVRESIAAVHDPAG 443 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSF 352 + + + +R H A D LT LPN L + Sbjct: 444 AVAYYIGIFHDITEQKASAQRIHQLAYYDVLTGLPNRALLMDRCQHELARAMRDGKRLAV 503 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D + ++ G + +R++ + L +++++ + +L G E +++L ET Sbjct: 504 LFLDLDRFKHINDSLGHPVGDGLLRAVAQRLQGTLRDSDTIARLGGDEFIVLLEHVETSA 563 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 ++ + L +G F + + L Q+ A Sbjct: 564 GVELAARRILDAFRDPFQLEEHRLSVGASVGISLFPDHASDITSLFKYADLALYQAKAAG 623 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 E + ++ L +R AL++ L L QP+ + G + +L Sbjct: 624 RGD-FRFFEPRFNDAAKDRMRLERELRQALERNQLSLQYQPVFALPDGRLAGAEALLRWT 682 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLL 585 G ++P F+P+ L VLE + P +VNL + + Sbjct: 683 HPALGSVSPATFIPIAEDSGLIVPIGAWVLEQACRQARQWLDAGLDPGVIAVNLSGMQIQ 742 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + ++ + + R + + LEI+E +AES + + QL G +AIDDFGTG Sbjct: 743 RNDLVDTVSSVLARTGLPACHLELEISESYITRHAESDLQRLGQLRALGVSMAIDDFGTG 802 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 + L+RL +KID F+ DI + A + R+I L L+VVAE VE+ Q+ Sbjct: 803 QTSLGHLRRLPVSKLKIDRSFMADIEHDAAAAAVTRAIIGLGHGLGLTVVAEGVESAAQE 862 Query: 706 ALLHKLGVQYLQGYLIGRPQPL 727 + L +QG+ RP Sbjct: 863 SALVAQHCDLVQGFRYARPLDA 884 >UniRef50_Q2VYM7 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2VYM7_MAGSA Length = 982 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 105/562 (18%), Positives = 194/562 (34%), Gaps = 37/562 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAAL---------SVLLLLLCTPYENDFIAGYLVPVF 247 ++ T+ + T + + G + Sbjct: 413 ITARKQAEESLRLAATVFETVGEAIVVTDRERRILAVNAAFERMTGWNAAEMVGQTCDLL 472 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI------SF 301 + + + + + + A L + Sbjct: 473 AVEMIGLRE-----IEEMWRLAANTGQWSGETWTRRKESEPFPAALALTAVDQGADAKGE 527 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + ++R R +R A D LT LPN + +A + + Sbjct: 528 DGRFVLLLRDITRKRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRAEQTGERLAVL 587 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L ++ + ++ YG + +R + R L ++ ++ + +L G E +++L Sbjct: 588 YLDVNRFKDINDSYGHAVGDELLRQVARRLKACVRASDVIGRLGGDEFVMLLPSVGDHTA 647 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 Q N + + L G + + + + LL + + Sbjct: 648 AQACANKVLYAFAEPFDMEGLQLFAGTSIGIALYPDDADGAESLLSRADAAMYHAKRGG- 706 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 L + + Q ++V L N +R AL + L QP + G + ++ Sbjct: 707 -LPYSCFDIEMDRQVAERVSLENDLRLALGEDQFRLVYQPKVDALSGAIIGAEALIRWRH 765 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQ 586 ++P F+P+ + L D VL + +A SVNL P Sbjct: 766 PVRADVSPGLFIPVAERAGLIGAIDDWVLVEACRQVAEWRAQGLILPSISVNLSPAQFHD 825 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + ++ + P + LEITE S+ + ++ + QL G R+++DDFGTGY Sbjct: 826 GRLKEKVKAALAGSGLPPSVLELEITETMMASDVDRAIEILGQLTTLGVRVSLDDFGTGY 885 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK +KID FV ++ N D I+ S+ LA SV+AE VET++Q A Sbjct: 886 SSLAYLKLFPVSTLKIDRAFVTELPGNAKDGAIIASVIALAGNLGFSVIAEGVETREQAA 945 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L G +QG+L RP A Sbjct: 946 FLAARGCPIMQGFLFSRPVNAA 967 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 30/139 (21%), Gaps = 13/139 (9%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY--LVPVFFIIFTLG 254 +A + +L A + L I GY + + + Sbjct: 290 LVLARNDDDLGGYRSLFENAVEGIYRTTPDGRYLDANPALARIYGYKDPAELIAGLTDIA 349 Query: 255 VGKLRYPFLNLTWA---VSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYM 308 G P + + N+ +A + VC Sbjct: 350 RGLYVDPADRERFREILARDSVVRNFEARVRTRSGEIIWIAENARAVYDGRDRLVCYEGT 409 Query: 309 VRIYHRSEWLNRRWHLQAL 327 V+ + L A Sbjct: 410 VQNITARKQAEESLRLAAT 428 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 90/455 (19%), Positives = 184/455 (40%), Gaps = 14/455 (3%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + Y ++ ++ F +L+ + A D LT LPN A Sbjct: 209 SSYKKTVVIHIIFWFVGMILFRFVYNKERK-ARYELEYFANHDSLTGLPNRHAYIDKITS 267 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + + + +DN + ++ G + ++ + + L ++E + L + G E Sbjct: 268 MVNKNKNNFALIFMDLDNFKTINDSLGHTLGDMLLQKVAKRLKNEIKEYDMLSRFGGDEF 327 Query: 402 LLVLSGPETEGRLQHM---VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 + + S ++E ++ ++ + + N + + + + + LL Sbjct: 328 VFLFSNVQSELTIEKTMIKIHEVLKKPFILNTYEVYTTASIGIAIYPDDAQDAELLLRNA 387 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---E 515 + + ++ +++L + + AL+ +L L QP + + Sbjct: 388 DVAMYDAKQSGRSK-YSFFNADMLNLSSNRLMLESELHKALENNELFLLFQPQVSLWNEK 446 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPR 574 G + ++ G+++P F+P+ L +++ LA Sbjct: 447 IVGVEALIRWQHPTKGLISPLDFIPIAENSGLIMPIGEWIIDQACDQLALWKDTHMSEAT 506 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 S+N+ +L +++ I +R I + + LEITE N ++ + +L K G Sbjct: 507 LSINVSAKQVLHQDLYSYIEAAIERTKIDGRFLELEITESVIMENINETVRILSRLKKLG 566 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 IAIDDFGTGY++ LK+L D +KID F+KDI + D I +I ++K+ SL + Sbjct: 567 VSIAIDDFGTGYSSLSYLKKLPIDKLKIDREFIKDIPNDKDDIAITNAIISMSKSLSLKI 626 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE ET++ L QG+ +P + + Sbjct: 627 VAEGPETKEHIEFLQNSKCDIAQGFYYSKPITIVE 661 >UniRef50_Q1H236 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=Q1H236_METFK Length = 722 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 103/574 (17%), Positives = 212/574 (36%), Gaps = 43/574 (7%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-------------LLLCTPYENDFIAG 241 + R A E L + + + Y + + G Sbjct: 123 RLETQNRSIHARLEESENLYRYLVNSSPDIIYTLDDSGHFTFINHRVETLLGYRRESLIG 182 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + + L L+ + + F + V+++ Sbjct: 183 KHYTEIIYSDDFDRASYAFNERRTGNRATRNIELRLKCKDLESDIRHFEINF-ITVVLNA 241 Query: 302 SVCL-------------LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 + + R + + QA D LT LPN + Sbjct: 242 TGTYGGTHESGTPFSGTYGVARDISDRKKVEEVITRQAYHDTLTGLPNRALFKDRLNVAL 301 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + + L +D ++++ G ++ + + L ++ + L ++ G E Sbjct: 302 NHAKRNQQQLAIMFLDLDRFKWVNDTLGHFYGDELLKHVAQRLSGCLRAQDTLARMGGDE 361 Query: 401 LLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 L+L + + + R + + + + + +T++ L+ Sbjct: 362 FTLLLHDLQQPEDASLVAAKIVDELKRPFLLDEREIFISSSIGIALYPDHGDTIETLIKS 421 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 E ++ K++ + N +R A+++ ++L+ QP + + Sbjct: 422 ADIAMYHVKWRGKN-GYQYYEASMNAMFHKKLSMENELRRAIEKKQIMLHYQPQVDVETR 480 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GP 573 + G + + + GI++P +F+PL + L +L K + Sbjct: 481 KIIGLEALARWHHPELGIISPTEFIPLAEETGLIFSLSEMLLGEACKQMQLWEAAGLLNF 540 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R ++N+ P + +++ + + + +H+ P+ +EITE + E+++ ++ L K Sbjct: 541 RLALNVSPQLVEEESFVSKTLSYIQSHHLKPEFFEIEITENLLVRDLENTVAKLKALGKH 600 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G RIA+DDFGT Y++ L++ IKID FV DI T+ I+ +I+ +AK L Sbjct: 601 GIRIALDDFGTCYSSLSYLRQFPIHNIKIDKSFVGDINTHDESVPIITAISGIAKGFKLD 660 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++AE VET QQ LHK+G +QGYL +P P Sbjct: 661 LIAEGVETLQQMKTLHKMGCNIMQGYLFSKPLPA 694 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 112/580 (19%), Positives = 213/580 (36%), Gaps = 32/580 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL----- 229 + + RM+ + +++ L T+ A+ + +L Sbjct: 372 GRAVERDAAGRVRRMLGTRRDVSARRQQEQEQRLAA-----TVFEAASEGIFILDPDYRV 426 Query: 230 LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L + GY + +G ++R + + + + Sbjct: 427 LAVNRAFSAVTGYSREEVVGRTVTSLIGSREMRRQYQMIRQELDGSGSWQGELIETRKSG 486 Query: 287 TEYSLAF---ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y ++ ++ R + D LT L N ++ Sbjct: 487 ELYPQWLQLNLVRDASGRPSHIVGFFADLTARREAEERLRYLSHYDELTGLANRSLFKER 546 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + + +D + ++ G + +R + R L + E + + + Sbjct: 547 LHEASQRARQSGRSIALVHIDLDRFKLLNDSLGHEVADQLLRQMSRRLTQAVPEADCIAR 606 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E ++L + L + + L ++ + L + + Sbjct: 607 LSGDEFAILLDAYGSLSSLARVASRLLAKLRLPMDVGGHELVVSASLGISLLPDYAREIG 666 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ Q + + + + + T +++ L N +R A+++G L ++ QP Sbjct: 667 ALISQANMAVQHAKHLGGN-TFQFFTDNLQACTLERLQLENQLRKAIEEGQLEVFYQPKL 725 Query: 513 NK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N + + ++ G++ P +F+ L + L A VL + Sbjct: 726 NLADDQLNAAEALVRWRHPQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQWQQQ 785 Query: 570 KK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 R SVN+ L Q N+ + ++ + ++PQ + LE+TE Q N +S + Sbjct: 786 GLAEIRVSVNISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTFR 845 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 QL + G ++AIDDFGTGY++ LKR +KID F++D+ DA I R+I +A Sbjct: 846 QLRELGVKLAIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMAH 905 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L VVAE VETQ Q L +QGYLI RP A Sbjct: 906 SLELKVVAEGVETQAQMDFLKSQNCDEIQGYLISRPVEAA 945 Score = 58.8 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 26/305 (8%), Positives = 53/305 (17%), Gaps = 37/305 (12%) Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 F+FG + L + + Q V ++ + A Sbjct: 104 FLFGAGAS-GLTLAFAVIVLVPPDVFYQQALVYGLIAAAILSASVAYAVSLSAFLTFALP 162 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVD---LLSLF 173 L G ++ + + + +L Sbjct: 163 CLLPSAAFLLLSDNSLQRGWGLLSVILFLALLVVAWQVNRLVQRSLLQRFHNQALIANLE 222 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWR------------------RDIAPSLGKEKRAF 215 A L L R + A+ R + R Sbjct: 223 HAKQRAEGLNEELAREVEQRRRAERELRGAHGELEMRVAERTLELDEATHALGKSQARLA 282 Query: 216 TLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV- 269 + L + L + + V ++ L L A+ Sbjct: 283 LALEASELGLWDWDLESDQVHHSHLRELFGLEPEQVQVMLRDLTPRLHPDDLPRLRRALV 342 Query: 270 ----STLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRR 321 + + +L R + Sbjct: 343 EHMKGRSEDYQIEYRVRHVDGHWVWVEDRGRAVERDAAGRVRRMLGTRRDVSARRQQEQE 402 Query: 322 WHLQA 326 A Sbjct: 403 -QRLA 406 >UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Alphaproteobacteria RepID=A6UJR0_SINMW Length = 1071 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 105/569 (18%), Positives = 197/569 (34%), Gaps = 34/569 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + R I A R + + ++ SV+L L + ++ Sbjct: 502 IWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTMDSVML--LDADWRVRYLNENAKK 559 Query: 246 VFFIIFTLGVGKLRYPFLN------LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + I K F + + + + Sbjct: 560 LLQIGDEALGKKFWKLFPEEEMGNFAKHCREVMERRVRSFFEDHLPSLGRWIEANASPTQ 619 Query: 300 SFSVCLLYMVRIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQAPEQ------ 346 R + A D LT LPN + EQ Sbjct: 620 DGISIF---CRDITERRRAEEDTLLAQKQLAHMARHDMLTGLPNRMFFRECFEQALNESR 676 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 A + CL +D + ++ G +R + + L+ ++ E + +L G E ++ Sbjct: 677 HARMAVLCLDLDGFKAINDTLGHPAGDVLLRQVSQRLIQSVRTTETVARLGGDEFAIIQP 736 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 ++ H+ L S +G + + L+ Sbjct: 737 LAKSRDEAFHLAQRLIDTLSEPFSIEGAAATVGTSIGIAFAPEDGTSADELIKAADIALY 796 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 + + + + Q + +R AL + L+ QP+ N E + Sbjct: 797 SAKSSGRG-TYRLFDVAMHAQLQAHQQMKVAMRDALANREFELHYQPLVNLESRCVSCCE 855 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 +L G++ P +F+P+ + +L+ + A P +VNL Sbjct: 856 ALLRWRHPQRGMIAPSEFIPIAEETGAIVLIGEWLLDEACRQAARWPER---VSVAVNLS 912 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P+ +N+ G + H+ P + LEITE +E ++ ++ L + G +IA+D Sbjct: 913 PVQFKHRNLVGAVANALSSSHLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMD 972 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L+ D IK+D FV+D+ IV+++ L ++ ++ E VE Sbjct: 973 DFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGRESLAIVKAVAGLGQSLGMTTTVEGVE 1032 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ Q A+++ G +QGYL RP P A+ Sbjct: 1033 TEDQLAIVNSEGFDEVQGYLFSRPLPAAE 1061 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 11/132 (8%), Positives = 26/132 (19%), Gaps = 11/132 (8%) Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLL--LLCTPYENDFIAGYLVPVFFIIFTLGVG 256 RR E R ++ A + + + T + N G Sbjct: 256 ERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWV 315 Query: 257 KLRYPFLNLT------WAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLY 307 + +P A + + + + + + + Sbjct: 316 DVIHPDDRQAVQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVGQPRFSADGTFLGYVG 375 Query: 308 MVRIYHRSEWLN 319 V Sbjct: 376 SVLDITDRRAGE 387 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 94/432 (21%), Positives = 170/432 (39%), Gaps = 19/432 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQA-------PEQEAGKSFC-CLRIDNLEFMSR 365 + R A D LT LPN E+ + + L +DN + ++ Sbjct: 332 ERKRAEDRISFLAHHDALTGLPNRVLFEEQVDGMLEEIRERDQCAVLAFLDLDNFKLIND 391 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL-----QHMVNI 420 G ++++ + +++ + + ++ G E +++L+G E + + + + Sbjct: 392 SLGHAAGDELLKAVAGRMRASVRKADFVVRVGGDEFIILLNGLPKERDIVLSRLEDIRSA 451 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + L + F T LL ++ + E Sbjct: 452 I-AMPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANADMAMYRAKELGRD-NIQVFTEE 509 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 ++ + +++ +R AL + LL+ QP N + +L GI++P Sbjct: 510 MAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSV 569 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L L + + L SVN+ ++N A R+ + Sbjct: 570 FIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEI 629 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 K + + + LE+TE + ++ + L G +AIDDFGTGY++ LKR Sbjct: 630 LKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFP 689 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID FV DI + D I +I LA+ L V+AE VE++ Q L K G + Sbjct: 690 VRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEI 749 Query: 717 QGYLIGRPQPLA 728 QGY RP Sbjct: 750 QGYFFSRPLSAE 761 >UniRef50_C6WYR4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYR4_METML Length = 681 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 103/561 (18%), Positives = 202/561 (36%), Gaps = 20/561 (3%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R ++ I +R E + L +L L L + A Sbjct: 109 RWLLRVMRYAIERKRAELELRQSEAKVRALYEAVPDLLLFLDLEGRFLECKPAKDFQTHI 168 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL-----AFILAVLISFS 302 LG + + + E + +L + + + Sbjct: 169 EPEHFLGKTIHEALPEGIAEQAMLCLEKVVVGSGITSFEYQMALPQGVSNYESRFIRASE 228 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCC 354 +L +VR S+ ++ H A D LT LPN ++ Q + Sbjct: 229 EQVLCIVRDISESKRTQQQLHFLAHYDTLTGLPNRLLFNESLHQAQTHANRTSDTIAVMF 288 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G + ++ + + ++E++ + ++ G E +VL E Sbjct: 289 IDLDRFKNINDTLGHGIGDKLLQQVGNRISLCIRESDTVARMGGDEFAVVLVNVREESDA 348 Query: 415 QHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + +G + Q+ LL + + Sbjct: 349 AVVAEKIIDALRLPFMVGEHEVFVGASIGITFYRPGQDDRDVLLEKADVAMYHAKERGRN 408 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNK-EGEGYDEILARLKY 528 + +++++ N +R ALD+ + +LY QP + + +L Sbjct: 409 -NFQFYSSEMDAVAYERLVMENHLRHALDRKEFILYYQPQIAVDGGRVTAVETLLRWQHP 467 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 D G++ P +F+ L+ + L VL++ + R +VNL Sbjct: 468 DRGLVAPGEFISLLEESGLIVPVGKWVLKTSCQQGRIWYDAGTPVRVAVNLSVRQFKHPG 527 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + P+ + LE+TE +A + + QL G +AIDDFG+G ++ Sbjct: 528 LVADVAEILAESGLPPELLELELTESMFMDSATGDVNKLTQLKALGVSLAIDDFGSGASS 587 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK D +KI FV ++ N D+ I ++ LA+A + + VAE VE QQ L Sbjct: 588 LAYLKDFPVDTLKICQSFVLNLPHNNDDSAIASAVLGLAQAMNFTSVAEGVENDQQANFL 647 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + Y QG+L +P P+ + Sbjct: 648 RERRCDYFQGFLFSKPLPVEE 668 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 96/424 (22%), Positives = 177/424 (41%), Gaps = 17/424 (4%) Query: 320 RRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMM 371 +A D LT LPN + + +A + + +D+ + ++ G Sbjct: 433 EELRHRAFHDHLTSLPNRMHSSTQLDLMISHTIKHQATAALLFIDLDHFKEINDTLGHST 492 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 +R + + L ++E + + +L G E ++ ET + + L + Sbjct: 493 GDELLRKVSQRLRRSVREEDIVARLGGDEFTVITGVLETRSDAESIAQKLLNELIRPYLI 552 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + L + F + + + LL ++ + ++ + +++ Sbjct: 553 DGNELSVTASIGVSFFPEDGDNSEILLRNADSAMYEAKRNGRN-GYRLYTSAMTEEISER 611 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 L +R A+ + +L LY QP + G + +L G++ PD+F+P+ Sbjct: 612 FALTEELREAISREELELYFQPQVDIRTGSILGAEALLRWNHPQRGMIPPDRFIPIAESS 671 Query: 546 NLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 + VLE + +A P+ +VN+ + + + +I L P Sbjct: 672 GQMIKIGAWVLEQVCAKVAGWKERGIVAPKIAVNISNQQ-MNRELVEQITELLASSKCDP 730 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE N E + + L G IAIDDFGTGY++ LK+L + +K+D Sbjct: 731 ACLELEITESCLMENPEQMAHELSSLKALGVGIAIDDFGTGYSSLSYLKQLPINKLKVDR 790 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV D+ + D I R+I + ++ +L+V+AE +ETQ+Q LL KL QGY +P Sbjct: 791 SFVSDLQDDENDLAITRAIVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSKP 850 Query: 725 QPLA 728 P Sbjct: 851 LPEE 854 >UniRef50_A3ESX6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Leptospirillum sp. Group II RepID=A3ESX6_9BACT Length = 703 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 96/573 (16%), Positives = 197/573 (34%), Gaps = 30/573 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL------SVLLLLLCTPYEN 236 F R I + K + T ++ Sbjct: 113 FMVAVRDISRRKQLIHDLHLEKEQWFVTLKSIGDAVVTTDEHGRVTYVNPVAEHLTGWKV 172 Query: 237 DFIAGYLVP-VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + G+ V VF I+ P + + L N+ L E+S+ Sbjct: 173 EEADGHPVSKVFRIVNEYSREPAENPVDRALLEGTIVGLANHTL-LLSRSGEEFSIEDSA 231 Query: 296 AVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 A + + + + R L +R QA D LT LPN + Sbjct: 232 APIQDNNGEIRGCIIVFRDVTEKRKLEQRIAYQANFDSLTDLPNRHLFQDRLSRAVGQAH 291 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + L +D + ++ G + + + L +++E + + ++ G E ++ Sbjct: 292 RTGSLVALLYLDVDYFKNINDRMGHPYGDRVLVELGKRLKTVVRETDTIARIGGDEFAVI 351 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + L + + + D+ + + L+ Sbjct: 352 LCDLHDRSEAMVLGRRLMIEAAMPFRIDGSRADLTVSIGVALYPEDGTDATTLIRNADIA 411 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EG 518 Q + ++ + + +R ALD+ L QPI + G Sbjct: 412 LYQVKREGRN-NIAFFSREMNRFVQSTLKTESELREALDKNRFYLAYQPIVHLGSALAVG 470 Query: 519 YDEILARLKYDGGIM-TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 + +L G + P++F+P+ + L +L ++ R + Sbjct: 471 VEALLRWRH--RGKVRFPEEFVPIAEEMGLILPLGQWILREAIREAGVWIRQGINLGRLT 528 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + + + + + + P + +EITE ++ + ++ + G + Sbjct: 529 VNVSVKQIHSEGFSDFLESTLRENGLPPSVLEIEITERTLMFRDHHTVSTLNRIREMGVK 588 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFG GY++ ++ + +KID F+ +++ N D IVR+I +A++ S+ VVA Sbjct: 589 VSIDDFGIGYSSLNYIRNFPVNTLKIDRSFLAEMLDNHYDRAIVRAILAMAQSLSIDVVA 648 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VE +Q L + G QG+ P + Sbjct: 649 EGVERLEQARFLQENGCLMAQGFFYSEPVSPEE 681 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 98/490 (20%), Positives = 183/490 (37%), Gaps = 23/490 (4%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 PF + + +L + + + Y + + ++ R L Sbjct: 268 PFETVRRTQQPVRILQHR-RDKEDTLSIYEIEASPLINNGQFDGMVSTARNITDRLRLEA 326 Query: 321 -------RWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRH 366 R + D LT LPN Q + +D ++ Sbjct: 327 SLDEKESRLLYMSNHDLLTNLPNRVLFRNRLNQAIARNHEGNHVVLLFIGLDRFTKINES 386 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G + + + + EN+ L +L G E +++ L + Sbjct: 387 LGREIGDNTLTQAAERFHNCLAENQILARLGGDEFAVIMEDCRHPQDAAKTAKKLLEQLI 446 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 IH + + + + E+ + L+ ++ + E ++ Sbjct: 447 EPIHVQPNEIYLTASIGISSYPQDGESPKTLMSHADIAMTRAKSEGKDR-YQFFEREMTQ 505 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 T + L N +R A+ + +L +Y QP +++ G + ++ G+++P F+P Sbjct: 506 TTKRVFELENDLRKAVARNELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPADFIP 565 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L VL + +A +VNL PL K + + + K Sbjct: 566 LAEETGLIVSIGEWVLRQACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAKTLKE 625 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 I+P + LE+TE + + S + +L + G +AIDDFGTGY++ L+ Sbjct: 626 TGINPACLELEVTESMIMDSIDKSTATMIELTELGAGLAIDDFGTGYSSLSYLRYFPLTK 685 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F++ + ++ DA + S+ LA + +L VVAE +E + Q L K QG+ Sbjct: 686 LKIDKSFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQGF 745 Query: 720 LIGRPQPLAD 729 L RP P D Sbjct: 746 LFSRPVPAED 755 >UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVS6_9PROT Length = 829 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 102/563 (18%), Positives = 188/563 (33%), Gaps = 33/563 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFFIIFT 252 + E+R + A + L + + GY Sbjct: 256 TERGKAERALRESEERYALAAAGANDGLWDWNLGSNRIFFSDRWKQMLGYATDEIEDGAE 315 Query: 253 LGVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-- 304 ++ + A T +T + + Sbjct: 316 EWFSRIHPEDVQRVTAQIDAHLNGTATNFESEHRVRHFDDTYRWMLVRGLAVRDGENNAY 375 Query: 305 -LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCC 354 + + + + AL D LT L N + Q + Sbjct: 376 RIAGSMTDVTERKRAEEQAIHDALHDSLTGLANRTLFLERVRQALARQRRSLSAQFAVIY 435 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR- 413 L +D + ++ G + I + R L ++ + + +L G E ++L + Sbjct: 436 LDLDRFKVVNESLGHVHGDDLIIAAARRLEQNLKFGDTVARLGGDEFAIMLEDVHDKEEG 495 Query: 414 --LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 L M+ S + N + +L ++ Sbjct: 496 TALSEMLQKALSTPFVLGGKEVFTTASMGIAHSTDNYVRPEDILRDSELAMYRAKELGKA 555 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 ++ + + G T + + +R ALD+ +++L QPI + G++ + Sbjct: 556 RSVA-FDPAMRGTTVTPLDVETDLRRALDRNEMILNFQPIVSLADGRIRGFEALSRWRHK 614 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLL 585 + G + P +F+P+ + + VL + + + SVNL Sbjct: 615 ERGDIPPSEFIPIAEETGMIVELGQWVLRNACAQMVEWNKEFPDQGPFEISVNLSGRQFT 674 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q ++ + + + LEITE NA+ S + L ++ +DDFGTG Sbjct: 675 QLDLVKMVTNSLDGTGLDASFLKLEITESALMENAQRSAQMLRHLKDLHIKVCVDDFGTG 734 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L + D +KID FV+D+ N + IVR+I LA+ L V+AE VET +Q Sbjct: 735 YSSLSYLHKFPIDTLKIDKSFVQDMGRNRHNLEIVRTIAVLAQNLRLDVIAEGVETPEQL 794 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 A L +G Y QG+L RP Sbjct: 795 AQLRAIGCGYAQGFLFSRPLTAD 817 >UniRef50_B2J301 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=8 Tax=cellular organisms RepID=B2J301_NOSP7 Length = 824 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 103/585 (17%), Positives = 214/585 (36%), Gaps = 26/585 (4%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 D+I + D T ++ +++ + Q ++ + + R T Sbjct: 228 DSIAAIKDDNGNITGAVLVFQDITERKQILAALARRQQEFKALVENAPDIISRFNTQLRY 287 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 ++ + + FI + R L T + Sbjct: 288 VYVNPAIEKVTGISAETFIGKTNAELNLP-----EEFCRMCDRKLGQVFQTKQETEFECT 342 Query: 281 F-LQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + Y + + SV + + R + + A D LT LPN Sbjct: 343 LAIAAQTRHYHTRLVPELASDESVYFVLSISRNITALKLAEAQLIHDAFHDILTSLPNRA 402 Query: 339 ALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 + E+ + L +D + ++ G M+ + ++ R L ++ Sbjct: 403 LFMERLERALMLAKRRADYTFAVLFLDLDRFKVVNDSLGHMIGDQLLTALARRLENCVRA 462 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDG 446 + + +L G E ++L +V ++ + + G Sbjct: 463 GDTVARLGGDEFTILLDDINNINDAIGVVERIHEALTSAFTLSGYEVFTTVSIGIVVSKG 522 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + +L ++ A + + + Q TK + L +R A+++ + + Sbjct: 523 SYNLPEQILRDADIAMYRAKALGKAR-HEIFDSTMYTQITKLLELEMDLRRAVERQEFQV 581 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QPI + G++ ++ G++ P+ F+P+ + L VL + + Sbjct: 582 YYQPIVLLETCKIIGFEALVRWQHPQHGLVPPESFIPIAEETGLIIPLGYWVLGEACRQM 641 Query: 564 ATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 SVNL LQ ++ +I ++ + + + LEITE N Sbjct: 642 RAWQIQFPTDPPLTISVNLSTKQFLQPDLIEQINQIMQETALEASNLKLEITESVLMENI 701 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 +S+ + + QL + ++ +DDFG GY++ L R + +KID F+ I N + IV Sbjct: 702 QSATFMLLQLQQMNIQLHLDDFGIGYSSLSYLHRFPSHALKIDRSFITKIGANGENLEIV 761 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 ++I LA++ ++ V+AE +ET +Q + L + +Y QGY +P Sbjct: 762 QAIITLAESLNIDVIAEGIETVEQLSQLRAMKCKYAQGYFFSQPL 806 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 99/482 (20%), Positives = 189/482 (39%), Gaps = 19/482 (3%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLN 319 + ++ + + Y + ++ + + + + Sbjct: 562 SRIWQSLLQEGRWSGEVWERRKNGELYPKWMTMRRMLNQYGETAFFVGVFVDISTQKATE 621 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + A DPLT LPN + + L ++ + ++ YG + Sbjct: 622 EQMERLAYYDPLTKLPNRALFHERLTQSITTAKRYKRHVGVVMLDLNRFKLINESYGYGV 681 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 + + ++ ++E++ + ++ + L + EG + + N L + Sbjct: 682 GDGLLIQVAERIVERLRESDIVARIGADTFAITLVDLKQEGEITGVANNLLKQFVMPFLV 741 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N L + + + + + LL + Q+ E +S + K+ Sbjct: 742 NGHELMLRTAMGIVLYPTDGQDAETLLRHVENALGQAKQQGVN-NYRFYSEEMSNISNKR 800 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L + TAL+Q D +LY QP N + G + ++ G+++P +F+P+ + Sbjct: 801 LALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFIPVAEET 860 Query: 546 NLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L L +LE+ + +VNL +N+ I I P Sbjct: 861 GLIVPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNSAIDP 920 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + EITE N E S+ + + G +AIDDFGTGY++ LKR + +KID Sbjct: 921 SMLEFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTLKIDQ 980 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F++D+ ++ DA IV +I +A+ +L VVAE E +Q L + G + +QGY RP Sbjct: 981 SFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYYFSRP 1040 Query: 725 QP 726 P Sbjct: 1041 LP 1042 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 124/692 (17%), Positives = 228/692 (32%), Gaps = 48/692 (6%) Query: 69 CGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ----- 123 + + + G+ A L QL R Q Sbjct: 416 MAAAVRQQVRAKEQQVASLALKGALFDFSSAAIFSLDRQLKVIEWNAAAERLFGQERDGV 475 Query: 124 --RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 R + P G ++GS + G DA V Sbjct: 476 LGRAAGEVVTAPNGPADWAAILGSTATGTFQFLGAHGPFDAELRFVTF------TQEERE 529 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + ++ I + R++ + + + +V L + I G Sbjct: 530 IHTFVLNDISERKHTERQLRQERDYADAVLNSLPGVFYHYDENVRLRRW--NRNLERITG 587 Query: 242 YLVPVFFII--FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-LAVL 298 Y + + + + V + ++L F + Sbjct: 588 YKSEELAGVEPTIFFADEDKALVASRIGEVFEKGESSVEADYLLKDGQRIPYLFTGVRFE 647 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRID 358 + + + +R A+ D LT LPN +++ EQ ++ Sbjct: 648 YDGRRGFVGVGYDISERKRAEQRIRHLAMHDGLTDLPNRNLIQERIEQAIVRA------- 700 Query: 359 N---------------LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + ++ YG + +++ LL L++E + + +L G E L+ Sbjct: 701 RRGGRLLALLYLDLDRFKVLNDGYGHLFGDAVLKTASERLLKLVREGDTVARLGGDEFLI 760 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L+ E + + I + + F + ET L+ Sbjct: 761 LLADLEQPADADAVARKIVGSLDCPIVVQERKIHLSGSIGVSLFPRDGETADELIDNADM 820 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GE 517 ++ +S +T ++V L +R A G L L QP + E Sbjct: 821 AMYRAKELGRN-TYQFFTRAMSLETQRRVDLEIKLRGAATAGQLQLVYQPKVSLENGGIS 879 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFS 576 G + +L + GI++P+ F+P+ L VL + + Sbjct: 880 GCEALLRWHHPELGIVSPEHFIPIAEDSGLIVPIGDWVLRTACMQARAWMDAGLPPVCVA 939 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ LQ+++ + R + + + LE+TE + E I+QL G + Sbjct: 940 VNVSTRQFLQQDVVAWVTRTLRETGLPAARLELELTESLIARDIEKVTATIDQLKDIGVK 999 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTGY++ LKR + D +KID FV++++T D IV ++ LA V+A Sbjct: 1000 LSIDDFGTGYSSLNYLKRFRVDTLKIDQSFVRNMLTEMEDETIVLAVIALAHNLKFKVIA 1059 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET+Q L G +QG+ P Sbjct: 1060 EGVETEQHSRFLCSNGCDEIQGHYFSEPVTAE 1091 Score = 45.8 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 22/239 (9%), Positives = 56/239 (23%), Gaps = 3/239 (1%) Query: 89 MLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFD 148 +G++ + + L T R+ ++ +GL +G+ F Sbjct: 312 WVGARRLDLKGGISWLVVASRTAPFIEAPLRHQLFQVLGMGLAIALGLVLVSVRTARRFG 371 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 PL + + + + L + + A R + Sbjct: 372 RPLAELERRVTGIGLHDLNASATSPLSSADDFRETQLLGKALDRMAAAVRQQVRAKEQQV 431 Query: 209 GKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 L ++ ++ L L + + ++ + P Sbjct: 432 ASLALKGALFDFSSAAIFSLDRQLKVIEWNAAAERLFGQERDGVLGRAAGEVVTAPNGPA 491 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 WA FL + + +++ + R+ Sbjct: 492 DWAAILGSTATGTFQFLGAHGPFDAELRFVTFTQEEREIHTFVLNDISERKHTERQLRQ 550 >UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2U2_PELCD Length = 988 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 104/617 (16%), Positives = 211/617 (34%), Gaps = 17/617 (2%) Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 ++ + + + L + A + R Sbjct: 354 VVLFESLAAILVLVAVILSLLRIIRRRKRTQLALEQDRSKLEAKVLARTAHLTEANRQLR 413 Query: 189 M-IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 M I+ + A + + L + + + Sbjct: 414 MEILERNQAARALKESEQEKSLILNSSSDLIAYLDPGLRIRWANRTSSDRAGRQQTQIEG 473 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 + G L + + + AF Sbjct: 474 LPCYAAWHGLDSPCIGCPVLRSHKTGLPEHGEVVTSDGQIWLVRAFPFHDSQGRVSGFAT 533 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAPE----QEAGKSFCCLRIDN 359 + R H A D LT LPN + + E + G + L +D+ Sbjct: 534 FSLDVSEQKKAQRTIHRMAYYDHLTELPNRALFQKELDRRLEEAVGRGHGLALMFLDLDH 593 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV- 418 + ++ G ++ I L + + L +L G E + +L+ + ++ + Sbjct: 594 FKGVNDSLGHAKGDLLLQKIAARLQGCLGREDFLARLNGDEFIFLLTEIDDPVAVKALAG 653 Query: 419 --NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + + + + +G + + ++ L+ + + A++ Sbjct: 654 NVQRIMASPFNLDGDEIYVGTSIGIACYPLHGVDVENLMKRADRALYAAKERGRN-AIEL 712 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 E ++ + ++ L ++ AL + + L QP + G + +L D G++ Sbjct: 713 FSEQINARFHRRQQLEMRLQNALAKNEFFLEYQPQVDLQTGRMLGVEALLRWRNDDLGLV 772 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTLLQKNIAGR 592 PD F+ L + L VL + + L+ + R +VN+ + + Sbjct: 773 MPDDFISLAEETGLIRPIGEWVLRTACQEYLSWWQPEGAELRLAVNISGQQIKHPDFVPI 832 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + P+ + LEITE A + E ++ L ++AIDDFGTGY++ L Sbjct: 833 IDDILHSTGFDPRLLELEITETVAMEDVEGNIGTFRDLKARRLQLAIDDFGTGYSSLSYL 892 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + D +KID F++D + A +V +I +A++ L ++AE VET++Q A L K G Sbjct: 893 RHFPIDRLKIDRKFIRDAAKCSDSASLVEAIMSMARSLHLDIIAEGVETEEQVAYLWKQG 952 Query: 713 VQYLQGYLIGRPQPLAD 729 + +QG+ GRP +D Sbjct: 953 CRQIQGFFFGRPMSASD 969 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 108/576 (18%), Positives = 211/576 (36%), Gaps = 25/576 (4%) Query: 178 IYNMLFYYLTRMIVSPHFAQ--ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-TPY 234 I ++ R++ + ++ K ++ ++ Sbjct: 169 IKAPMYDMDGRLLGVIGTTRDIARYKAAEEQLFLTSKVFENAIEGVMITDSNGIITEING 228 Query: 235 ENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + I GY R F NL A+ T + + T ++ Sbjct: 229 AFETITGYSRDEVIGKTPKLLNSGRHERDFFENLWRALKTQGHWHGEIWNRRKNGTLFAE 288 Query: 292 AFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------ 342 ++ + + + + A DPLT LPN L Sbjct: 289 QTSISAVYGEDGQVRCFVAVFSDISLLKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQI 348 Query: 343 --APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 A ++ + + +D + ++ +G + + S+ L L+ + L ++ G E Sbjct: 349 KLAANRKTRLALLLIDVDLFKHINDSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDE 408 Query: 401 LLLV--LSGPETEGRLQHMVNILNSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +L+ + + + + + + + + + LL Sbjct: 409 FVLLTQVRRRDDIPVILSAIQRAFDTSFDTSEGESVRLSASIGIAVYPDDGDNPDTLLKN 468 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-- 515 ++ E ++ + +Q+ L +R A+ L L QP N Sbjct: 469 ADAAMYRAKQQGRNR-HAFYTEQMTQSSMQQLRLQTALRGAVKNSALSLVYQPKINLRTR 527 Query: 516 -GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP- 573 G + + ++ G+++P +F+P+ L L VL+ + P Sbjct: 528 KLIGVEALCRWTDHELGVVSPAEFIPVAESIGLMPEIGLWVLKEACRQARIWRDQGLNPG 587 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R +VN+ L N A + R+ + +SP A+ LEITE N S++ +++L Sbjct: 588 RMAVNVSGSQLTGDNFADSVARVLTQTGLSPDALELEITESVVLDNPASAIDTMDKLRGM 647 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +A+DDFGTGY++ L++L + +KID FV+++ T+ I +I + +A L Sbjct: 648 GVSLALDDFGTGYSSLSYLRKLPLNKLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLG 707 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VE + Q L +LG QGYL RP ++ Sbjct: 708 VIAEGVENETQAEFLLRLGCTEAQGYLFARPLLASE 743 >UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with response regulator, putative n=6 Tax=Cyanobacteria RepID=B0C9M5_ACAM1 Length = 636 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 99/500 (19%), Positives = 186/500 (37%), Gaps = 21/500 (4%) Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 F + + + + E + + A L V Sbjct: 125 FQLAEILARVENQLTIGRLQKEQRKQNERLQAEVRDRIAAEAQIQALNADLEQRVVQRTE 184 Query: 308 -MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRI 357 + + E + ++ A+ DPLT LPN E+ + + L Sbjct: 185 RLNQEIAEREKVQQQLKHMAMHDPLTDLPNRTLFLTCLEETIQDTQKQTDQSFALLFLDC 244 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G ++ + +I + + + L +L G E ++L E + ++ Sbjct: 245 DRFKSINDSLGHLVGDQFLVAIAKRFQRCVGDQ-LLARLGGDEFTILLKNVSNEQQAINI 303 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + H + + + + +L ++ A + Sbjct: 304 ADAIQRSLLEPFHIGDNEFFVSASIGIVMSSPDYQQPTEMLRDADTAMYRAKAMGKARHI 363 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 + + L +R A+++ + +L QPI G++ ++ + + G Sbjct: 364 -VFNASMHEDVQSSLQLETDLRRAIERQEFILNYQPIVALDTGMITGFEALVRWISPELG 422 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQKN 588 ++P KF+PL L VL + L + SVNL Q N Sbjct: 423 FVSPGKFIPLAEDTGLIIPLGEWVLREACRQLNEWQSNNVTDIPLTMSVNLSVKQFSQPN 482 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I ++ + Q + LEITE N++S+ ++QL ++IDDFGTGY++ Sbjct: 483 LIETIDQILAETQLPTQCLKLEITESAIMENSDSAAKILDQLRDRQIHLSIDDFGTGYSS 542 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L R + +K+D FV + + IV++I LA+ + VVAE +ET +QQ L Sbjct: 543 LSYLHRFPVNTLKVDRSFVCRLDAADDNVAIVQAIVTLAQTMGMDVVAEGIETTEQQHQL 602 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 LG +Y QGYL +P Sbjct: 603 ENLGCEYGQGYLFCKPVNAE 622 >UniRef50_C1SL51 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL51_9BACT Length = 1016 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 91/510 (17%), Positives = 185/510 (36%), Gaps = 21/510 (4%) Query: 240 AGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY +P + +L + + + + + Sbjct: 499 TGYSEEEIIGKNARMFRPGIHPDYFYEDLWKNLFKYGKWDGEVWQKKKDGEIFPTLMSCS 558 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---- 349 + + ++ + + QA D LT LPN ++ Sbjct: 559 SIRNSEGEITEFISVLHDITEQKRYEEQIKYQATHDSLTGLPNRIYFTDKLAEQIPKNHL 618 Query: 350 ---KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 L +D + ++ G + I + + + + G E + + Sbjct: 619 PSCIGIMFLDLDRFKNLNDTLGHTTGDKVLEIIAERIRNTVHGPDMAARFSGDEFTVFFT 678 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 G + + L MV + S +H L + A + N T L+ Sbjct: 679 GVKNQDALIEMVKNVTKRISEPLHIQGYELFIQTSAGISVYPDNGLTASELIKNAEIAMY 738 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 Q+ + + + + ++ + + A++ + L+ QP + G + Sbjct: 739 QAKQTGKN-NIQLYTDGLDETIRDRFIMESKLNRAIENDEFSLHYQPKIDLATDSVMGME 797 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNL 579 +L + G + PDKF+PL L V++ L A + + ++NL Sbjct: 798 ALLRWHNPELGFIPPDKFIPLSEDSGLILPIGEWVMKRALSDTAKLHKEGFADLKIAINL 857 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 ++K + + + + ++ + V EITE + + + ++ + AI Sbjct: 858 SLRQFMKKGLVEFVEKSIETAGLNNRNVEFEITENIFTEDLSTISRIMNEISNLNIKFAI 917 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK++ +KID ++ I ++T IV S+ ++K+ L+VVAE Sbjct: 918 DDFGTGYSSIGYLKKMPISTLKIDRSYISKIDSDTDSESIVSSVILMSKSLGLNVVAEGA 977 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET+ Q +L +G +QGY G+P P + Sbjct: 978 ETESQVNMLKDMGCSIVQGYYYGKPMPYDE 1007 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 100/551 (18%), Positives = 193/551 (35%), Gaps = 28/551 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFF---IIFTLGVGK 257 +++ T VL+ L + GY Sbjct: 275 ALAERQRLHATALESTRDGVLIADLTGRIISVNPAFSEMTGYTAAEAIGRNPRLLQSGRH 334 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHR 314 R + + +++ + Y L+V+ L + + Sbjct: 335 DRAFYQAMWASLTQAGHWQGELWNRRADGEIYPQWATLSVVKDEHGQPTHYLAVFTDLSK 394 Query: 315 SEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRH 366 + A DPLT LPN ALE+A Q + + +D + ++ Sbjct: 395 LKHREEELEHLAHYDPLTDLPNRLLLRSLLQHALERAQRQGGKSAVLVINLDQFKNVNDS 454 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G + + + L ++ + + +L E + +L + + L + Sbjct: 455 LGHALGDELLLGVTARLKARLRHEDVVGRLGADEFVAILEASQDAENAGSIAGDLLAALA 514 Query: 425 -QIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + F + + LL ++ + Sbjct: 515 PPFVLADGHETYARASIGISVFPQDGKGANDLLRSADVAMHRAKQRGGNQ-YAFYTGELG 573 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 +++ + +R AL QG+L+L+ QP + G + +L + G++ P +F+ Sbjct: 574 HGALQRLEMETALRRALIQGELVLHYQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFI 633 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L V+ + + +VN+ + + + Sbjct: 634 PLAEETGLIVPIGAWVINETCRQIRAWAEAGQPSVMVAVNVSARQFAGGELEAVLATALR 693 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++ + P+ + LE+TE + E + ++ L + G +A+DDFGTGY++ L R D Sbjct: 694 KHAVDPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVD 753 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ IV++ A I ++ LA +L VVAE VET+ Q + L K +QG Sbjct: 754 ELKIDRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQG 813 Query: 719 YLIGRPQPLAD 729 YL P P + Sbjct: 814 YLFSAPVPADE 824 >UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=B1J7P7_PSEPW Length = 699 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 121/579 (20%), Positives = 215/579 (37%), Gaps = 36/579 (6%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLG-------KEKRAFTLSWLAALSVLL-------L 228 F +TR I ++ + + + ++ SV++ + Sbjct: 115 FAKVTRDISERRQQELELLQAKELAEQYSQEMTKLSQFLDSVIANIPASVIVQDLESQRI 174 Query: 229 LLCTPYENDFIAGYLVPVF--FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 LL G + L Y L Sbjct: 175 LLANQQAERLFGGRGRSMIGRLPGECLAPAAADYLEQQLARGARNPKGYAAETCVDTACG 234 Query: 287 --TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 T S A + + +L++ + + H A D LT LPN + Sbjct: 235 PRTLRSRALLSQNREGQADYVLFVAEDATEELAAHAQIHHMAHHDALTGLPNRTLFNERL 294 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + + CL +DN + ++ G +R++ + L ++E + L +L Sbjct: 295 KQALVRGHQNDKLTAALCLDLDNFKNINDSLGHAFGDKLLRALGKRLRRELREQDTLARL 354 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +VL+G + + L +G + E + Sbjct: 355 GGDEFAVVLTGLDGREAACNTAKRLIEAICPPFQIEGHQFTVGVSIGIAIAPDDNEQAEQ 414 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LLG ++ + + + ++ L+ +RTAL G L L+ QPI + Sbjct: 415 LLGYADMALYEAKRNGRNR-YECFHVELDVAARQRRLVETDLRTALHLGQLHLHYQPIVD 473 Query: 514 KE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 ++ GY+ +L G++ P F+P+ + L + L + A+ ++ Sbjct: 474 QQTSSVTGYEALLRWEHPTRGMVMPMDFIPIAEETGLIHELGTRALNLACQEAASWDSEQ 533 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVNL P+ N+ + ++PQ + LEITE N+E ++ + L Sbjct: 534 ---TVSVNLSPVQFKNANLVHTVALALADSGLAPQRLELEITESVLLGNSEENVRTLRAL 590 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G I++DDFGTGY++ L+ D IKID FV D+ + IVR+IT+L+ + Sbjct: 591 KDLGVSISLDDFGTGYSSLGYLRSFPFDRIKIDKSFVHDMCDSREAMSIVRAITELSNSL 650 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + AE VE+++Q L G + QGYL GRP P + Sbjct: 651 MIKTTAEGVESEEQMQRLAAEGCSHFQGYLYGRPVPAGE 689 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 31/138 (22%), Gaps = 7/138 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + +++R I + T + A Y D I G +F+ Sbjct: 1 MSLVASPDVMYRLLIQSVVDYAIYLLTPDGIVANWNPGAQRAKGYLADEIIGKHYSLFYS 60 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY-- 307 G + L+ + + ++ + + L+ Sbjct: 61 EAERVAGLPEQNLAQARDTGRFEEIGAR----LRKDGSTFHAHVVIEAVRDDNGHLIGFA 116 Query: 308 -MVRIYHRSEWLNRRWHL 324 + R Sbjct: 117 KVTRDISERRQQELELLQ 134 >UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0L7_9PROT Length = 951 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 112/569 (19%), Positives = 205/569 (36%), Gaps = 28/569 (4%) Query: 188 RMIVSPHFAQ--ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 R I S Q T + ++ + + G+ Sbjct: 361 RAIRSAGTVQDVTFREEAATQLRIAAVAFDTQEAIMVTDKEANIIKVNHSFELTTGFSEQ 420 Query: 246 VFFIIF--TLGVGKLRYPFLNLTWAV-STLCLLNYNQNFLQGVETEYSLAFILAVL--IS 300 LG G+ F W V + + + + Y + + Sbjct: 421 EVLGKNPRLLGSGRHNQDFYKSMWEVLNRVGSWSGELWDRRKNGEIYPKWLTITAVKNRD 480 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + + + H A DPLT LPN R L + + Sbjct: 481 EISHYVGVFVDITERKKAEEEIHNLAFFDPLTQLPNRRLLLDRMRLALGLSARSKNFGAL 540 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE--- 409 + +D+ + ++ G + + L +++ + + + G E +++L Sbjct: 541 MFIDLDHFKVLNDTKGHEYGDKMLIEVSHRLTQSLRDTDSVARFGGDEFVVLLESLSVNQ 600 Query: 410 --TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + S+ + + F+G+ + LL + Q Sbjct: 601 DIAVAQAGSIAEKMRESLSQTYIIESYAHESTPSIGVVLFNGDAIEIDELLKRADLAMYQ 660 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEI 522 + + E + + L+ +R AL + LY Q N E G + + Sbjct: 661 AKESGRN-TVRFFESAMQATLESRTLMERALRQALSNSEFELYYQVQTNQANELLGAEVL 719 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLM 580 L G ++P +F+PL Q L VLE+ L R +VN+ Sbjct: 720 LRWHSQSLGPISPAQFIPLAEQTKLILPIGEWVLENACARLKAWETHPTLSKLRLAVNIS 779 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P+ Q + ++ ++P+ + LE+TE + + ++ + L G R ++D Sbjct: 780 PVQFHQPDFVRQVQAALTDSGVNPRRLELELTENLVLEDVDEAIQKMSALKALGVRFSMD 839 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ + +KRL D +KID FV+DI+T+ DAM+V++I +A+ V+AE VE Sbjct: 840 DFGTGYSSLQYIKRLPIDQLKIDQSFVRDILTDPGDAMMVQTIAGMARNFGYEVIAEGVE 899 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + G QGY RP LA+ Sbjct: 900 EHAQLLPLIERGCNTFQGYFFSRPVALAE 928 >UniRef50_Q2BQ91 Multisensor diguanylate cyclase/phophodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ91_9GAMM Length = 852 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 116/739 (15%), Positives = 249/739 (33%), Gaps = 49/739 (6%) Query: 38 HSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVV 97 H W+ + +++ ++ + G L+ + V Sbjct: 100 HDDIAIQFWIGTRYLEALILLYSPFAARQKVRGKPIFFLFACISLIITVLVFNDLFPRTF 159 Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFWLG----------LVTPIGIKCSMYLVGSFF 147 + + +++ + + L LF G + I + L +F+ Sbjct: 160 IDGEGLTDFKIYSEYLIDLILLAALISLFRCGEGIRYREKQLIAASIVMTMLAELAFTFY 219 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF------------ 195 +S G + + + + I L Sbjct: 220 VSVYGLSNIVGHLFKLASYWLIFNAIVISNIKKPYSELLASERRFRRLFENNEVALWNVD 279 Query: 196 -------AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY-LVPVF 247 + L +R + ++ A ++ + + T F A L P Sbjct: 280 LSGVHGELENLRKRGVTNLRQHLYENREIAPALADTIHITDINTASLELFSAETDLDPRA 339 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 + + L + + F E + + + Sbjct: 340 QSEQLMRTLPMSMFVEQLCAIWERQPNIRHEVVFRNVDNEELAAIVSFQ-IPETILEYAN 398 Query: 308 M---VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 + V + + ++ QA D LT L N + Q + + Sbjct: 399 VPVSVVDITQRKQDEQKIWRQANFDQLTGLANRNYFTDSLSHTIDLAERQGDKFALLYID 458 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G M + + L ++++ + +L G E ++LSG ++ Sbjct: 459 LDRFKQVNDTLGHSMGDKLLNDAAKRLKENSRKSDIIARLAGDEFAILLSGTGRPEVIEP 518 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +V L + + + F + + LL + ++ Sbjct: 519 LVTKLLNSLAAPYDLSGNETTISASIGIALFPEDGCEVADLLRKADSAMYKAKEDGRN-N 577 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKEGEGYDEILARLKYDGG 531 E + + ++ L + A++ + LY QPI + E + ++ G Sbjct: 578 FHFFTEEIEKEALRKRQLEQDLNRAIENQEFELYYQPIETLDAEVISAEALIRWNHPLRG 637 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIA 590 +++P +F+P + + +L A +L+ + P+ SVN+ +N+ Sbjct: 638 LVSPIEFIPFMEETSLIAPLGEWILKQACQDAMHWDHHCSVPPKVSVNISTRQFQNQNMP 697 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + ++ +S + LEITE + +S+++ + L G +++DDFGTGY++ Sbjct: 698 ALVKQILTDTGLSADRLTLEITESLMIDDEDSTIHQLNSLRLMGVALSVDDFGTGYSSLS 757 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ +KID F++ + D+ +V +I +A++ L VVAE VET Q L Sbjct: 758 YLKKFPVSYLKIDRSFIQGLPNCQEDSALVEAILSMAESLRLQVVAEGVETSSQANYLAS 817 Query: 711 LGVQYLQGYLIGRPQPLAD 729 L +Y+QGY + +P P D Sbjct: 818 LKCRYIQGYWLSKPIPQHD 836 >UniRef50_C6XE67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE67_METSD Length = 910 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 104/597 (17%), Positives = 205/597 (34%), Gaps = 47/597 (7%) Query: 171 SLFTAVLIYN-MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL--- 226 SL + +L Y L+R+ R + E+R + V Sbjct: 315 SLIAGAGLAVSVLLYLLSRLFAYRTQTLKTMRDMHKDLILSEQRWKFALEGSGDGVWDWD 374 Query: 227 LLLLCTPYENDFIAGYLVP--VFFIIFTLGVGKLRYPFLNLTWA------VSTLCLLNYN 278 + + + + ++ ++ + Sbjct: 375 IEKNEVIRSSRWKTMLGMEDWEMGPELEAWKERIHPEDVSRVLSDLEKYMNGETTQYINE 434 Query: 279 QNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 L + + V+ + ++ + + QA D LT L Sbjct: 435 HRLLCKDGSWKWILARGMVVDWAADGRPLRMVGTHTDITKLKESESLVWKQANFDQLTEL 494 Query: 335 PNFRALEQAPEQEAG---------------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 PN R QE D+ + ++ G ++ Sbjct: 495 PNRRMFYDRLAQEIKKSNRLGLPLALLFLDL-------DHFKEVNDTLGHDKGDQLLQEA 547 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMG 436 R + +++ + + +L G E +++LS E + + + S + Sbjct: 548 ARRINHCVRDTDTVARLGGDEFIVILSELEDLNSIDRIAQAILCKLSASFKLGEDIAFVS 607 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + + ++ LL + + A + + +++L+ N +R Sbjct: 608 ASMGITLYPTDANSIDNLLKNVDQAMYSAKASGRNR-ISYFTPSMQQAAHQKMLITNDLR 666 Query: 497 TALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL + L ++ QPI + + + +L G+++P +F+P+ L Sbjct: 667 LALQEQQLQVHYQPIIHLASGTIQKAEALLRWHHPQRGMVSPAEFIPIAEDTGLIMEIGD 726 Query: 554 QVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIA-GRIIRLFKRYHISPQAVILEI 611 V E + + + SVN P+ + + + K+ + Q++++EI Sbjct: 727 WVFEQAMVQVKKWQQQRGAHFQISVNKSPVQFKNDSSTHDQWLDYMKQLGLVGQSLVVEI 786 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE +++ + G ++A+DDFGTGY++ L+R D IKID FV++I Sbjct: 787 TEGLLLDTSQNVSKKLLAFRDAGIQVALDDFGTGYSSLAYLRRFDIDYIKIDQSFVRNIS 846 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T D + SI +A LSV+AE +ET++Q ALL G Y QGY P Sbjct: 847 TQPDDLALCESIIAMAHKLGLSVIAEGIETEEQCALLKAAGCDYGQGYWFSPAVPAD 903 >UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=Q12L20_SHEDO Length = 1047 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 102/584 (17%), Positives = 201/584 (34%), Gaps = 28/584 (4%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-LL 230 L T ++ RM + H +R S + ++ Sbjct: 447 LDTGKVVEVADTGQPLRMCGT-HTDITDLKRAEESLSIAASVYRNSSEAMCVFDYQGKIV 505 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGV---GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 T I G+ + + + L L + +F + Sbjct: 506 NTNPAFSEITGFDADEVIGQHLAVLQKEEQAEHFNLQLEQYLFEKRYWQGELSFQRKNGQ 565 Query: 288 EYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 Y+ + + C + + + LQA D LT LPN R L + Sbjct: 566 TYTAWVTINAIGELDTCDTLNVMLFADVSEKKQAEELIWLQANYDTLTGLPNRRMLLEYI 625 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 G + L +D + ++ G M + + + +++ + + ++ Sbjct: 626 KLQIANCTRDNQGFALLFLDLDFFKEVNDSLGHDMGDSLLVEASQRIKACIRDADLVARI 685 Query: 397 PGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +VL+ ++ + N + S + + + + T+ Sbjct: 686 GGDEFTIVLTDFTGPKGVERVTNKILKQLSEPFMLGSEMAYISGSIGITLYPDDALTIDG 745 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL + AH + + +++ L+ ++TA+ + LY QPI + Sbjct: 746 LLKNADQAMYSAKAHGRNK-FNYFTPKMQETALRRMKLIQDLKTAIKMEEFELYYQPIID 804 Query: 514 ------KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + ++ G ++P F+P+ + V + A Sbjct: 805 FSANASDNITKAEALIRWHHPKLGFISPVDFIPIAEDTGMIVEIGNWVFRQACRQAAQWK 864 Query: 568 CD-KKGPRFSVNLMPLTLLQKNI-AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + S+N P+ + + ++SP ++ +EITE Sbjct: 865 QTYGLDIQISINKSPVQFRDERSSVTSWTQYMSELNLSPASICVEITEGLLLETESGVGA 924 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + G +I++DDFGTGY++ LK+ D +KID FV ++ NT D + +I Sbjct: 925 KLAAFRDAGMQISLDDFGTGYSSLSYLKKFDIDYLKIDKSFVSNLEDNTNDLSLCEAIIV 984 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ + V+AE +ET+ Q+A+L G Y QGYL +P D Sbjct: 985 MSHKLGIKVIAEGIETELQRAMLECAGCDYGQGYLFSKPVKAED 1028 Score = 45.0 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 21/282 (7%), Positives = 72/282 (25%), Gaps = 22/282 (7%) Query: 44 LAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAI 103 L + ++ S++ ++ R V+ V + + + ++ + Sbjct: 91 LFFASSALIASLVGLYFGRYVLLVAALVLSPYVIY--------LTDFPIISLILALGLSG 142 Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 + L R+ +L+ GLV I + L + + +++ + Sbjct: 143 VLGALFRRYTVEHLGTIKLAKLYLFGLVVQIVFLSTSMLTADNWRHVIHLNS-------L 195 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + +V + A + + R + L++ + + Sbjct: 196 YLLVFFPLIMLAAANLMSKYIFFERNMQIRLQEDFLFKNQFDIGNIGIAITSKAKYWLKV 255 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + + + E + + L + ++ F+ Sbjct: 256 NPCICKMLKYSEKELTRMTWKELTHPEDLEKDLSYFNRMLK-----GEISEYEIDKRFIA 310 Query: 284 GVETEYSLAFIL--AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + + S+ ++ + + Sbjct: 311 KDGAIVYTHLTVACRFYDNGSMLVIAGFLDITKLKQAEAALQ 352 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 111/576 (19%), Positives = 213/576 (36%), Gaps = 36/576 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + + R + A ++ A A E Sbjct: 439 VLGILGIARDVTERQRASEQLALVNFALNHVKEAALLADENA------QFHYVNDEACRS 492 Query: 240 AGYLVPVFFIIFTLGVGKL---RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 G+ + + + R + L + L + ++ + + + Sbjct: 493 LGWTPEELLRLKVTDIDRDLTGRGQWRALWEQIKVLNSMTIEGHYKTRSGRTFPVEVSVN 552 Query: 297 V-LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA------- 348 + +L +VR + + + A D LT LPN R L Q Sbjct: 553 YFVYGGREYVLSLVRDVTERKEVEAQIRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTR 612 Query: 349 -GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + + + R L +++N+ + +L G E ++VL G Sbjct: 613 EYGALMILDLDRFKTLNDTQGHDVGDRLLIDVARRLTASVRQNDTVCRLGGDEFVVVLEG 672 Query: 408 PETEGR-----LQHMVNIL---NSRQIHW--NNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++ + + + ++ N + F G+ T LL Q Sbjct: 673 FGSDEDQAVTQAEAIAEKVRAALNQPYSLSGNGSRFHSTTSVGLTLFCGHDATADMLLKQ 732 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-- 515 Q+ L + + ++ + +R AL++ + +Y QP ++ Sbjct: 733 ADVALYQAKDAGRNL-VRFFNPAMQAAIDTRMAMEAALRQALERDEFHVYYQPQVDQRER 791 Query: 516 GEGYDEILARLKYDG-GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKG 572 G + +L G ++P +F+PL + L VL+ L D Sbjct: 792 VIGAEALLRWR-PQGNEAISPLEFIPLAEETGLILPIGKWVLDVACAQLKAWESDPRAAH 850 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 + +VN+ + + + R + P + LE+TE E+ + +E+L+ Sbjct: 851 LKIAVNVSARQFHEPDFVATVQDSLARSGVDPTRLQLELTESVVLEKIETVVSRMEELNA 910 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +DDFGTGY++ LKRL D +KID FV+D+V ++ DA IV++I ++++ L Sbjct: 911 LGVSFCLDDFGTGYSSLSYLKRLPLDQVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGL 970 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +V+AE VET Q+ L QG+L P P+ Sbjct: 971 NVIAEGVETHAQRDFLAGK-CLGYQGFLFCEPIPIE 1005 Score = 73.5 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 90/354 (25%), Gaps = 40/354 (11%) Query: 30 FISPLAIIHSSYIFLAWMPLCVML--SILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTA 87 +S ++ +A + ++ ++ F W + +L + +W ++ Sbjct: 166 LLSVAVMLAYPASLIAAASIGLVAEPTLRLRFSWSYWLFLLSLVGSATVWMIWNTWALRG 225 Query: 88 VMLGSQTF-VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 + + V A+ W+ G + W+R W + + ++ L GS Sbjct: 226 ETVANIRVDAVFSLTALGMGVATLYWQVGASPNLHWER--WSQAIVRVLPLATVVLAGSA 283 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 + + T+ L + A+L ML R Sbjct: 284 VVLLGDRTDVSATSRTAVTIASLTVIVLAMLRQGML----LREHAQLKIVTRNLEESERQ 339 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA-----GYLVPVFFIIFTLGVGKLRYP 261 L WL + + +C P F F I+ K R Sbjct: 340 KNLILHTLPDLVWL-KDADGVYQMCNPAFERFTGRTEAEMRGKTDFDIVGPELARKFRNE 398 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 A L ++ Q S+ L + +L + R + + + Sbjct: 399 DAQAMLADHPLTSMHALQAVDGRDVQIESVKTTLRDRDRRVLGILGIARDVTERQRASEQ 458 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRID---NLEFMSR----HYG 368 A + D +++ G Sbjct: 459 LA-LVNF--------------ALNHVKEAALLA---DENAQFHYVNDEACRSLG 494 >UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=D1CEK7_THET1 Length = 1785 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 99/574 (17%), Positives = 200/574 (34%), Gaps = 33/574 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + + + A I +RR + E R L + + +I+ + Sbjct: 1202 FLQSVSNILAAAIEYRRAAQDLMRAEARYRKLVEQIPAVTYIEEMGMRGVVSYISPQVED 1261 Query: 246 VFFIIFTLGVG------KLRYP------FLNLTWAVSTLCLLNYNQNFLQGVETEYSL-- 291 + ++ +P ++ A + + Sbjct: 1262 MLGYTPEEWTSNPDPWSRIIHPDDYEDVATSMEKAEELGIPFRKEYRMISKSGEIVWVRD 1321 Query: 292 -AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 A I+ + ++ + L + QA D LT LPN Sbjct: 1322 EAVIVRDAEGQPLFWQGVLVNITDKKKLEDKLAYQAFHDALTGLPNRALFMDRLKGALAR 1381 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + L +D + ++ G + + LL +++ + + + G E Sbjct: 1382 AKRYNSCCAVLFLDLDRFKHVNDSLGHQYGDQLLIEVGNRLLSVVRSADTVARRGGDEFT 1441 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L + + + + N L + + + L+ Sbjct: 1442 ILLEPICELEYAKQVAERVIKELEKPFLINGQELYISTSIGIALSNE-YSDAEELIHNAD 1500 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 + + + + +S T +++ L + +R A+ + + L QP+ +KE Sbjct: 1501 VAMYWAKSRGRAR-YEVYDLSMSTFTLEKLKLESELRRAVQREEFSLVYQPVVRLRDKEV 1559 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPR 574 + +L + G++ PD+FL + L +L + + + P Sbjct: 1560 VALEALLRWHHPERGLLLPDQFLKELEDTGLIMPLTDWMLREVCRQHKEWQKRVAGELPL 1619 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN + + + + + +SP + LEITE A +A S+ ++ L G Sbjct: 1620 VSVNFTARQFQKATMLEDLASILQDMDVSPSCLQLEITETVAMDDAASTARTMKGLKDLG 1679 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++A+DD GTGY++ L++ D++K+D FV + + IV ++ LAK+ + V Sbjct: 1680 VKLALDDVGTGYSSLSYLRKFPLDVLKVDRTFVMGLGVDPDSTAIVHALVMLAKSLGMLV 1739 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE Q Q L LG QGY RP Sbjct: 1740 TAEGVEKQVQVDALSTLGCDLAQGYFFSRPMEPD 1773 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 19/207 (9%), Positives = 47/207 (22%), Gaps = 39/207 (18%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + I R + S A E+R + +A+ + L Sbjct: 598 SYAYVLDRGYIVRDASGKAIRAVGSMLDITHRIEAAKA-LRESEERFKAIFEDSAIGMAL 656 Query: 228 LL--------------LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 + + +ND I + + + + Sbjct: 657 IDQEGRILKTNKALTKILGYTQNDLIEKNFLELVHPDHESTLRGRFTRIFS-----GKNT 711 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDP 330 + Q ++ E ++ + S S + + M+ + + R QA Sbjct: 712 HYHVEQRYIHKDGHEIWGNLTVSAIRSHSGDVDLAVCMLEDITSRKQADSRILFQA---- 767 Query: 331 LTLLPNFRALEQAPEQEAGKSFCCLRI 357 + + + Sbjct: 768 ------------RLLDQVPVAVIACDM 782 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 118/548 (21%), Positives = 199/548 (36%), Gaps = 28/548 (5%) Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 R L+A L+ E A +P ++ + G + Sbjct: 12 DETVSRYTVEVLLSAEGYNLVFAENGEEALKKAAESIPDLMLLDVMMPGMDGFEVCQRLR 71 Query: 268 AVSTLCLLNYNQN--FLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWL---- 318 L L + +S L VR R Sbjct: 72 TNPRLAELPIVMVTALDDRDSRLRGIEAGADDFMSKPFDRAELRARVRTITRLNRYRRLI 131 Query: 319 --NRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYG 368 + A DPLT LPN L + Q + L +DN + ++ G Sbjct: 132 ETEEQLAYLANYDPLTKLPNRNLLLERLRQTLGRATRTHQDIAILALDLDNFQMINDGVG 191 Query: 369 LMMRVHCIRSICRTLLPLMQE-NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 + + + + L + + + +L G E +++ + M L SR Sbjct: 192 HDVGDKVLHEVAQRLTQTVSKIGATVARLSGDEFVVIEESDNLVKDVSEMAQGLLDNLSR 251 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + ++ + + + + E LL ++ A + ++ Sbjct: 252 SMVIDHHEMVVTASIGISVYPSDGEEAAILLKNADTAMARAKAAGKN-TYQFFKAEMNKA 310 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 ++++L N +R L +L+LY QP + + G + +L + GI +P KF+P+ Sbjct: 311 AFERLMLENQLRKVLSNNELILYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVPV 370 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L VL + + T R SVN+ + N+ I Sbjct: 371 AEEMGLIVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEALADS 430 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 +++P + LE+TE + + ++ G IAIDDFGTGY++ LKR D++ Sbjct: 431 NLNPIYLELELTESVLMAEESGIFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVL 490 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FVKDI ++ DA I +I +A + LSVVAE VETQ Q L + +QGY Sbjct: 491 KIDRSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYY 550 Query: 721 IGRPQPLA 728 RP Sbjct: 551 FSRPICSE 558 >UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepID=A3JQI8_9RHOB Length = 908 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 103/657 (15%), Positives = 217/657 (33%), Gaps = 41/657 (6%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS- 171 R L + + + + LV + I + L ++++ + + L + Sbjct: 240 RAKLREPVMGKLRYLIPLVLGMIIIALLLLRWRLTPLEVQLTEEVTERKRAEASLGLRAD 299 Query: 172 -LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--- 227 L A + + R+ + + A + A +++ Sbjct: 300 ELERANAEKDKRADEMLRLTTKLTEEVVERKHAEALLRNSMASLSATTETALDAIVQMDK 359 Query: 228 ----------LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 + G + + L L + Sbjct: 360 KGKITKWSNKAEEIFGWLQAEAIGKNLGETIVPLQYREAHLSGMKHFLATGEGPVLNRRI 419 Query: 278 NQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 L E+ + +A + +R ++ + A D LT LPN Sbjct: 420 EITGLHRNGHEFPIELSIAPFKMNGEYAFSAFMRDISEAKAAEDEINKLAFYDALTGLPN 479 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 R L L +D + ++ G + R + ++ Sbjct: 480 RRMLYGKLEDEMKRSDRSGLPVVLMLLDLDFFKEVNDKLGHAQGDRLLVEAARRITACVR 539 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFD 445 E + + +L G E +++LS + + H+ + + + + + + Sbjct: 540 ETDTVARLGGDEFMIILSNMKDVTKASHIAENIIKSLAAPFYLSEKINFISGSLGVALYP 599 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ + + ++ L++ +RTAL Sbjct: 600 NDAQNADNLIVNADQAMYMAKDAGRN-GFSYFTLALQEAAQTRLSLISDLRTALPGKQFA 658 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 ++ QPI + + +L + G ++P F+P+ + L V ++ Sbjct: 659 VHYQPIVELATGKIYKAEALLRWQHPERGPVSPADFIPVAEEAGLIHEIGDWVFHEAIRE 718 Query: 563 LATHPCDK-KGPRFSVNLMPLTLLQ---------KNIAGRIIRLFKRYHISPQAVILEIT 612 LA + SVN+ P+ + + + + ++V+ EIT Sbjct: 719 LAHWRELFEPELQISVNVSPVQFRESQGSDRRSLEGFKKNWLNALNGLGLPGESVVFEIT 778 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + S + + G ++A+DDFGTGY++ LK+ D +KID FV+++ Sbjct: 779 EGVLVNAEASVTEKLIAMRDAGVQVALDDFGTGYSSLSYLKKFDIDYLKIDQSFVQNLQD 838 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +T + + +I +A L V+AE VET+ Q+ LL G Y QG+L + P + Sbjct: 839 DTDNQALCEAIIVMAHKLGLKVIAEGVETEPQRDLLVGFGCDYAQGWLYSKAVPADE 895 >UniRef50_C6WW34 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW34_METML Length = 623 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 97/532 (18%), Positives = 199/532 (37%), Gaps = 25/532 (4%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 V P + F + L L V+ + N Sbjct: 76 IPFIVYTATYTEPEDEKLALSLGADAFILKPCEPEDFLARFIDVLVKGVAASPDIASEVN 135 Query: 281 FLQGVETEYSLAFILAVLISFSVCL----LYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + ++ L ++ L ++ + R + + A D LT LPN Sbjct: 136 SGHSDTLKDYSVILIRKLEEKTLQLEEANQFLQQDIARRKEAEDKIQHLAYYDLLTNLPN 195 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L + + + +D+ + ++ G + + + + L M+ Sbjct: 196 RLLLIDRLQHTLAMSARHQNHGALLFIDLDHFKTLNDTKGHSVGDLLLVEVAKRLQTCMR 255 Query: 389 ENEKLYQLPGSELLLVLSGPETEG-----RLQHMVNILNSR---QIHWNNTGLDMGYGAA 440 E + L +L G E +++L + + + + + S + ++ Sbjct: 256 EGDTLARLGGDEFVVILQDLSEDSSQAAVQAETVCAKIISAINLPYYLDSYLYHSSTSVG 315 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F + T+ LL + Q+ + + + + L + +R A+ Sbjct: 316 VCLFRNQEFTVDELLKRADIAMYQAKSAGRNTQ-RFYDPTMQAALEARAALESDLRLAIK 374 Query: 501 QGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + LY Q + G + ++ G++ P +F+PL + L V+E+ Sbjct: 375 KNQFRLYYQMQVDHSGNVHGAEALIRWQHPQKGLVPPLQFIPLTEETGLIIPIGHWVMET 434 Query: 559 LLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + D + + +VN+ + R I + R+ I P + LE+TE Sbjct: 435 ACAQIKRWESDPLTRNLQVAVNVSACQFHDPSFVERAIEMLSRHKIKPGNLKLELTESLV 494 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N E ++ ++ L +G ++DDFGTG+++ L +L D +KID F++++ N D Sbjct: 495 LDNVEEAIMKMQALKSYGVLFSMDDFGTGFSSLSYLTKLPLDQLKIDQSFIRNMCMNNRD 554 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A++V++I +A + V+AE VE++ Q+ L + QGYL +P P+ Sbjct: 555 AVVVQTIIGMANNLGIEVIAEGVESETQREFLEQNKCNLCQGYLFSQPLPID 606 >UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=B1M4V3_METRJ Length = 777 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 119/740 (16%), Positives = 242/740 (32%), Gaps = 43/740 (5%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNF 79 + + L+ + +S + ++L W P + V Sbjct: 31 VALRLVPFTILVSLSVV--QVIVYLFWNPANRAYLAGLETLILPLAVVSLQQCWRWRSRP 88 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 + ++ + G + + R + + T + Sbjct: 89 KPLQVPSSFVQGVVLAAQAYGFLLASIPVMLFSGADAHGRLLIASSIAGLIATGMSAAVL 148 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY--YLTRMIVSPHFAQ 197 + + + + +F A +++ + F +L+R++ AQ Sbjct: 149 PRVAIGYSGL-IILGSFIALATTGEAFYIYVAVLLFFYAIFICFTILHLSRLLTMRVIAQ 207 Query: 198 ILWRRDIA-----PSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPV 246 I R + +E + L A L L+ + E + L + Sbjct: 208 IELERQQEFTHLLLNEFEESASDWLWETDADLRLQHVSPRLIEVAGSSERQLMGLPLERL 267 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--- 303 + L+ + + + Sbjct: 268 LLPPVAPPRSHSSTTLWSCIAERRAFRNLHLQLDIA---GERRTWCLSGKPTFDRAGAFS 324 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE-------QAPEQEAGKSFCCLR 356 + R AL D LT LPN + Q + L Sbjct: 325 GYRGVGSDVTEKRRSEERLSYLALHDSLTDLPNRVLFHQLQEAARERLAQGDRFAVLALD 384 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG--PETEGRL 414 +D + ++ +G ++S+ L + +L +L G E ++ +G + Sbjct: 385 LDEFKSVNDTFGHAAGDKLLKSVAERLRSFEASDVQLARLAGDEFAVLATGRSARDLHAI 444 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + N + + + L + + Q ++ + + + Sbjct: 445 EALANGIVEALASPFTIDGIRLTVSVSIGIAIAPQDGC--QEIMRRADLALYRMKSEGRN 502 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 E + + + L +R ALD+ + +LY QPI G++ ++ Sbjct: 503 -GYRFYEAEMDERIEARRALTADLRGALDRDEFVLYFQPIVAAKECRVRGFEALIRWKHP 561 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G ++P +F+PL + + +L + A P R +VNL P + Sbjct: 562 VRGFVSPGEFIPLAEETGVIIPLGEWILREACRIAAGWPG---DVRIAVNLSPRQFRHSD 618 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + ++ + LE+TE + + +L + G R+++DDFGTGY++ Sbjct: 619 LTQLVRSALRTSGLAAARLELEVTESVFLEATPAINATLSKLREMGVRLSLDDFGTGYSS 678 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+R+ D IKID FV+D+ A IV +I D+A + +++ AE VET Q+A L Sbjct: 679 LSYLRRIAFDKIKIDQSFVRDLPQERGAAAIVSAIIDMATSLDMTITAEGVETDAQRACL 738 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 + G QGYL +P P Sbjct: 739 LEQGCHEFQGYLFSKPLPAE 758 >UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRK3_9GAMM Length = 992 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 106/615 (17%), Positives = 219/615 (35%), Gaps = 35/615 (5%) Query: 143 VGSFFDFPLKISTFFGDADAIF--TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 S P+ + ++ + TV+ V + + + + F I Sbjct: 378 FFSAESLPVAMEKVRTQSETPYQATVITRDGTAIPVTVNGKAVLWNGQKARAASFRDITR 437 Query: 201 RRDIA-PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 R + + E R LS L A +L+ Y + I + + L Sbjct: 438 RIEYQKRLMASEDRFRQLSDLVAEGLLI------YSENKIIDVNQSLCELFGQRREDLLE 491 Query: 260 YPFLNLTWAVSTLCLLNY-------NQNFLQGVETEYSLAFI-LAVLISFSVCLLYMVRI 311 L S + N+ + + T + ++ + ++ +R Sbjct: 492 SDLSELFSEQSLTAINNHPDTAAALELSLERADGTLFPAEITTASMQFDDGLFIVLSIRD 551 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFM 363 R + QA D LT +PN + EQ + + +D + + Sbjct: 552 ISRYKEQEEHILYQAQFDLLTHIPNRFLAKDRAEQAIRNADKHDGKLALMFIDLDGFKKV 611 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + ++ R + +++ L + G E +++ + + + Sbjct: 612 NDSMGHEVGDQLLQQATRRFVSCIEKQHTLARHGGDEFIIIQEDIADPTDSEIVAEKILQ 671 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + N L + + + LL ++ + Sbjct: 672 QFSNPFSIENKQLIVTASIGISIYPDDANNYSDLLRAADIGMYKAKHDGRNR-FHYYTQE 730 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK-----EGEGYDEILARLKYDGGIMTP 535 ++ T+++ L N++R AL + L QP+ + +G + ++ G ++P Sbjct: 731 MNDIATRKLALDNSLREALQNREFNLVFQPLICNVKGQPKVQGAEALIRWTSPVLGQVSP 790 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRII 594 +F+P Q L VLE + D + SVN+ P ++ + Sbjct: 791 VEFIPHTEQSGLIIPIGRWVLEQACQQAKRWVDDGQEDVFISVNVSPRQFKGNDLLRDLT 850 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + P + +E+TE + ++ + G +++DDFGTGY++ LK+ Sbjct: 851 SALESSGLHPHHLNIEVTEGLLIEASPELNNTLQLITDMGINLSMDDFGTGYSSLNYLKK 910 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 + +KID F+K++ N+ A++V + +A LSV AE +ET +Q L L Sbjct: 911 FPFNNLKIDRSFIKELPDNSDSAILVTATIAMAHQLGLSVTAEGIETAEQYNYLRGLRCD 970 Query: 715 YLQGYLIGRPQPLAD 729 LQG+ +G+P P + Sbjct: 971 RLQGFYMGKPVPANE 985 >UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXA0_LEPCP Length = 771 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 127/738 (17%), Positives = 250/738 (33%), Gaps = 33/738 (4%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L L + + + L W+ V L ++ W Sbjct: 4 LPLAAGTALASTLVIAAFTPGVTADTGLLVWLVSVVTLLLIHGRHWWQWRQRRQAG---R 60 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + L+ L + + + + + + G L + + Sbjct: 61 VSTRTLTALIAHAGVFATLWGAVPGWMLAQANAGQHAL--LAGSLTGMLCIGGVTLAAVP 118 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 YL G + V V M+ + + + Sbjct: 119 AAAYAYLGGLSLSLIVSQFMQPSAQLGAGAVQWAGCAAVMVGGVLMMSRTVRARVQAEMQ 178 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAAL-------SVLLLLLCTPYENDFIAGYLVPVFF 248 A+ + ++ L W S L + L+ V Sbjct: 179 AEHQGQLIGLLLRDFGEQGSDLLWQIDERGCLSQVSRRLADALGRPLAELQGRPLLEVLT 238 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCL 305 + R L + ++ + L ++ Sbjct: 239 ELQQGLSDIDRDATQMLQTCLIEGQPFRDVLMPMRVKGQPRWWSLTAKPLVNERGVAMGW 298 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQAPEQEAG----KSFCCLRI 357 + R ++ +RR A D LT L N LE A +Q + CL + Sbjct: 299 RGVARDVTQARMADRRMAWLAHFDTLTGLTNRAHFRVLLEAALQQARSPEQGGAVMCLDL 358 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + R L + + + +L G E ++L ++ Sbjct: 359 DHFKTVNDTLGHPTGDALLVEVARRLKAAVGPGDVVGRLGGDEFAVLLRNAADVQQISAT 418 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + RF + ++ L+ + A ++ Sbjct: 419 AQRILDALREPCAALGAQVPVRLSIGIARFAQDGASVDELMQHADLALYDAKASAPG-SM 477 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + Q ++++L +R A+D+ L L+ QP + + G++ +L + G Sbjct: 478 KFFAPRMGEQVRRRLVLERDLREAIDKQQLSLHYQPKVDLQTWEVTGFEALLRWRHPEHG 537 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 + P +F+P+ L VL + A P + ++N+ P+ ++ +N+ Sbjct: 538 NIPPSEFIPVAEDSGLILPIGEWVLTQACQQAARWPA---PMQVAINISPVQVMAQNLPE 594 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + R K ++P+ + LEITE + ++ + L K G +IA+DDFGTGY++ Sbjct: 595 AVGRALKASGLAPRRLELEITESVFINETRGTVDRLHALRKVGVQIALDDFGTGYSSLAY 654 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+R D +KID FV++++ + IVR+I LAK+ +S VAE VE Q ++L Sbjct: 655 LRRFPFDTLKIDRAFVREVLLSRDARAIVRNILALAKSLRMSTVAEGVEEPAQASVLGNE 714 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QG+L+ RP P + Sbjct: 715 GCDLVQGFLVSRPMPADE 732 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 116/556 (20%), Positives = 211/556 (37%), Gaps = 36/556 (6%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 + + + A + + +L+ ++ + GY + Sbjct: 338 EKQAREDELRVAAQVYEQSREGILITDAQHRIVMLNSRCCELTGYTQGEVVGTTPEWMFS 397 Query: 255 VGKLRYP-FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIY 312 ++ P F+ L + Q + L + S + M Sbjct: 398 ESQVSTPGFVELCRHLDEQGGWAGELLLRQRNGQLFLAWLTLRTVRLGTSTYHVCMFGDL 457 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSF-------------CCLRIDN 359 + RR A D LT LPN L A + L ID+ Sbjct: 458 SDRQAAERRIQYLAYFDTLTGLPNRALLTDR----ANMALRGVEGDAAPALALLLLDIDH 513 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G ++S+ + L ++E + + + G E +++L R + Sbjct: 514 FKHINDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDANA-SRAASVAQ 572 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + R + + + L ++ L Sbjct: 573 EILRRLGFVCRIGEHDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAKQEGRN-TLRF 631 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 + +T + V L +R A+++G++ L+ QP + E G + +L G + Sbjct: 632 FFPEMQERTLRHVQLTGALRGAVERGEMQLHYQPQVDLQTGELSGVEALLRWTHPLFGAV 691 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGR 592 +P +F+PL + L VL + + LA D +VNL L +A + Sbjct: 692 SPGEFIPLAEESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSVLQFNLPGLAQQ 751 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + + P +E+TE A + E+++ I++LH G ++++DDFGTGY++ L Sbjct: 752 IASILSEAGVPPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGYSSLAYL 811 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KR + D +KIDG FV+D ++ D IV +I +A++ L+ VAE VET Q ++ LG Sbjct: 812 KRFRLDRLKIDGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLEVIRALG 871 Query: 713 VQYLQGYLIGRPQPLA 728 +QGY I RP P A Sbjct: 872 GDAVQGYWISRPLPAA 887 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 105/557 (18%), Positives = 192/557 (34%), Gaps = 26/557 (4%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSW-LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 +R S + +L + GY Sbjct: 970 ATDITARKRAEEQLRLAALVFDRASEGVMVTDTEQRILTINDSFSTLTGYTRQEVVGKTP 1029 Query: 253 LGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 + R P + + V+ L + + Y + + + + Sbjct: 1030 RLLRSDRMPREFYAEMWDKVTRLGVWQGEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYV 1089 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 M + +R A D LT LPN + +D Sbjct: 1090 GMFSDITKVRESQQRIEYLATHDELTGLPNRALFNDRLNLALAHAERSRESVGVVFIDLD 1149 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 N + ++ G ++ LL ++ + + +L G E +++L + Sbjct: 1150 NFKVVNDTLGHETGDKLLKQAAMRLLECVRAEDTVARLGGDEFVVLLVN-ADRQQATLTA 1208 Query: 419 NILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L S H+ + F + L+ ++ H Sbjct: 1209 ERLLTGLSTSYHFGEHECFISASIGLSMFPEDASDANSLMRNADSAMYRAKDHGKN-GFR 1267 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 ++ Q +K++ L +R A++ G+L ++ QP E G + ++ Y+G + Sbjct: 1268 FFSADLASQASKRLALETGLRRAIENGELFVHYQPQVRLECDTVVGAEALVRWR-YNGEV 1326 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P F+P+ Q +L D VL + + R SVN+ + +A Sbjct: 1327 IDPVVFIPIAEQSHLIFAIDDWVLGEACRQIIEWDRAGLPPLRISVNISARHFRKDGMAA 1386 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ + + +SPQ + +EITE + + + + +L + G RI+IDDFGTG+++ Sbjct: 1387 DLMDIVSAHGVSPQRLCIEITEGVLM-DVDRAQRMLAELVESGLRISIDDFGTGFSSLSY 1445 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR +KI FV I T+ D I I LA+ +SVV E +E Q A L Sbjct: 1446 LKRFPIHELKIARSFVDGISTDADDRAIASVIISLARQLGMSVVGEGIERTGQHAELEAF 1505 Query: 712 GVQYLQGYLIGRPQPLA 728 G QG+L +P Sbjct: 1506 GCHRGQGFLYAQPLAPD 1522 >UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Geobacter RepID=C6DZH0_GEOSM Length = 853 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 104/563 (18%), Positives = 206/563 (36%), Gaps = 33/563 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVL--------LLLLCTPYENDFIAGYLVPVFF 248 + + L E++ T+ V + + + I GY ++ Sbjct: 268 ISIRKNAEQALLSSEEQCRTIVSNINEYVYSVRFEEGDITSVYHSPKCFDITGYTPEEYY 327 Query: 249 IIFTLGVGKLRYPFLNLTWA--VSTLCLLNYN---QNFLQGVETEYSLAFILAVLISFSV 303 L + NL L++ + + + AV Sbjct: 328 RDPLLWFTMIHEEDRNLVVEFLNGIFAGLDHEPIRHRIIHKDGSVRWIVNNCAVQRQRRG 387 Query: 304 CLLYMVR------IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 L + R + A DPLT LPN L + EQ Sbjct: 388 DRLSITRLDGFILDVTDIKRAEENIFFLAHHDPLTKLPNRSTLYERMEQVICAAQKSSRN 447 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L ID + ++ G + ++S+ + L + + + +L G E +++L Sbjct: 448 VALLFLDIDGFKQINDSMGHDVGDRLLQSVAKRLSDCTRSCDVVSRLGGDEFVVMLWDCG 507 Query: 410 TEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 E + + + + + + F + LL + Sbjct: 508 -EAETTVVAEKVINAGFPVLGSNVTVTPSIGISIFPDDGRDYLTLLKHADIAMYHAKKSG 566 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 ++ ++ +L +R ALD+ + +LY QP + + G + ++ Sbjct: 567 GN-NFQFFTHKLNEIAHERFMLEAELRRALDREEFVLYYQPKVDLSTGKFSGMEALIRWQ 625 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 G+M P+ F+ + + L + ++ ++ + + +VNL Sbjct: 626 HPAHGLMLPESFIGIAEESGLLTQISKWIIPTVCRQIQQWQQQGINSVSAAVNLSASFFQ 685 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + I + I+P+ + LE+TE S+ + + ++ + G +++IDDFGTG Sbjct: 686 HPDFEETIEESLLQTGIAPECLELELTEATIMSDPQRVLGSMAAMKALGLQLSIDDFGTG 745 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK+L D +KID F+ +I + +A +VR++ + ++ L V+AE VE Q Sbjct: 746 YSSLSYLKKLPVDKLKIDQSFIHNIARDADNAAVVRAVISIGRSMQLRVIAEGVENASQL 805 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 A L G + QGY RP P+A Sbjct: 806 AWLQAEGSEEAQGYYFSRPLPVA 828 >UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8Z9_METSD Length = 828 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 115/584 (19%), Positives = 216/584 (36%), Gaps = 28/584 (4%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSV 225 V + + + + + + + R + S Sbjct: 244 VVIDGQVIGTVGFARDITAERWLEAEIARRENEYSMLVQNLPLTVVRYDRECRRVFVNSY 303 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFT--LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + + + G F+ + + + + + + + + Sbjct: 304 CAMKESLKHNIGQVIGKTPMEFWSGSIVNITAEEYQQRIMAVMASGE-----SDTLELIT 358 Query: 284 GVETEYSLAFI-LAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 E + + + S S ++ + + +R A D LT LPN Sbjct: 359 QYGEEQLVHLVRIVPERSASGAVMGAMTVASDVTENSRYRKRIEQLAYHDILTELPNRLL 418 Query: 340 LEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 Q + + G + +DN + ++ G + + + R + L+ +++ Sbjct: 419 FNQQLQILIEQTPINKHGFCLLFIDLDNFKTINDTLGHSVGDKLLIEVSRRIRQLLGKDD 478 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 L ++ G E + L + + + ++ + + + Sbjct: 479 MLARMGGDEFAISLPHCLSRLDAALLAARIIDALNVPFEVSSIKFFVSASMGIAFYPEDS 538 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L LL + + ++ +++L+ N +R AL +G+L LY Sbjct: 539 SHLDDLLKHADLAMYHAKRQGRN-NFQFYNQELTVNAAERLLMENLLRQALAKGELQLYY 597 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI E G + +L +D G++ PDKF+P+ + + VL + Sbjct: 598 QPIMELATGELHGAEALLRWNSFDLGMVGPDKFIPIAEERGMIVDIGAWVLREGCRTAVA 657 Query: 566 HPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + P ++NL +Q++ RI + PQ + EITE +++ Sbjct: 658 WNALRSQPCVLAINLSSRQFMQQDFLSRITDCLQETGCHPQWLKFEITESLLLHDSDHIR 717 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +E LH G IAIDDFGTGY+ L + +KID F+ DI TNT A++V++I Sbjct: 718 QTLEALHSIGITIAIDDFGTGYSALGYLNKFPVSQVKIDRSFISDIATNTESALLVKAII 777 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A + +VAE VET +Q LL +LG QY+QGY GRP PL Sbjct: 778 AMADSLGKELVAEGVETAEQAKLLSQLGCQYVQGYYYGRPVPLE 821 >UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XX17_LEPCP Length = 790 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 128/726 (17%), Positives = 241/726 (33%), Gaps = 29/726 (3%) Query: 27 LSRFISPLAIIHSSYIFL-AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQ 85 L SP A++ + L + L L L++ W +L T ++ + Sbjct: 32 LFYRQSPAALLGGAIGALLVVLALQDALPALWLRSWLLAAELLIVGRLTTTLHYMHGGAE 91 Query: 86 TAVMLGSQTFVVLCACA--ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC----- 138 + + ++ A + LG T++ L L ++ Sbjct: 92 RHSLARWRQLALVFTIAQGLTWGSLGLMSLAVPTAQDEALILVCLLVIVAGSAALVGTLP 151 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 + + + + S + + L + R I + H A + Sbjct: 152 LLVPLFGVLTLLPITLVMALGSSGAQHFLAFCSFTFMLTVTVSLPRSMQRAIRARHSASL 211 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL-----VPVFFIIFTL 253 R + E+ A + L + + + ++ Sbjct: 212 AQRDTLQRLEMAEQMAHVGHLVWDAGAAQAQLSAGAQRMLGLDGVGALEHRDIVELVVPA 271 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYH 313 ++R N + + GV + + L+ ++ Sbjct: 272 DRERVRLLIRNSLQQTQSQLRYETQVSTPAGVRDLMVVQHLETGADGRVTRLMSTLQDTS 331 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKSFCCLRIDNLEFMSRHYGL 369 + R A DPLT L N QA Q + L +D+ + ++ G Sbjct: 332 ELKQTQRELQKLAFNDPLTGLGNRAWFMQALAGMLRQGERSALLMLDLDHFKAINDTLGH 391 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQI 426 + + L ++ + L +L G E ++L + L R Sbjct: 392 HAGDLLLGMAAQRLQRVLGDTASLARLGGDEFAIILPAIASSAAAAQQAQALIDTLTRPF 451 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + + + + LL + S + Sbjct: 452 SVAGVEVYVSASIGIAVSPQDADDTEALLRCADVAMFDAKGLGRA-GYQFYAAQQSERAR 510 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++VLL +R A+++G+L L+ QP + G + +L + G++ PD+F+P+ Sbjct: 511 ERVLLEGDLRRAIERGELELHYQPKVDMRTDRVVGAEALLRWHHAERGMVPPDRFIPVAE 570 Query: 544 QFNLSARFDLQVLESLLKWLATH----PCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 L VL + + + +VNL P + + + Sbjct: 571 DTGLIIPIGEWVLRTACTAATHWNRTRRARGQEALKIAVNLSPRQFWSPHFVAMVRAVMH 630 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 P+ + LEITE + +L + GF +AIDDFGTGY+ L R Sbjct: 631 ETGCRPEWIELEITESLLIDTRGQVSEILAELSRLGFTLAIDDFGTGYSALGYLTRFPIS 690 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV ++ T+ A +VR+I + + L +VAE VET +Q +L ++G Q QG Sbjct: 691 TLKIDRSFVNEVATHPARASLVRAIVAMGHSLQLELVAEGVETHEQVQVLREMGCQLAQG 750 Query: 719 YLIGRP 724 +L GRP Sbjct: 751 WLYGRP 756 >UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Trichodesmium erythraeum IMS101 RepID=Q118H0_TRIEI Length = 866 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 107/610 (17%), Positives = 202/610 (33%), Gaps = 69/610 (11%) Query: 188 RMIVSPHFAQI-LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL--- 243 R I AQ ++ A E+R L + ++ + + + L Sbjct: 246 RDITQQKRAQEFALQQAEAALKESEERYHRLVKNSPEAIAVNYMEKIVYINAAGAKLFGA 305 Query: 244 ----VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYSLAFILAV 297 + ++ +L V + + + ++ + + Sbjct: 306 NCPDEIIGQLLRKFIPSELIETEKQRLQQVQEQGMETHLQEEKLIKLNGEIIDVEILGIP 365 Query: 298 LI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQE 347 +++ + + AL D LT LPN + + Sbjct: 366 YTYDGKAATQIILKDITHRKKTQAKLVYDALHDTLTGLPNRALFFERLKLALCRSRKQPN 425 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + + +I + L ++ ++ L +L G E ++L Sbjct: 426 YQFNVLFLDLDRFKVINDSLGHTIGDRLLIAISKRLQNCIKASDTLARLGGDEFTILLES 485 Query: 408 PETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGR----FDGN-----------QE 449 P + ++ I+ + F + Sbjct: 486 PSNLQDATKVAGRIHQELVRPIYLEGNEIFTTASIGIVTNRRNFIEDIDENHPLICPIYN 545 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD-------QG 502 + LL ++ + + + + + L N +R A++ Sbjct: 546 KPEDLLRDADIAMYRAKTLGKAR-HEVFDLTMHREAISLLQLENDLRRAIEIIKQNPVNS 604 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 +L QPI G++ +L G++ P +F+PL + L + +L S+ Sbjct: 605 QFILNYQPIICLNTGIITGFESLLRWAHPTRGLIYPGQFIPLAEETGLIVPLGMWILRSV 664 Query: 560 LKWLATHPCDKK------------------GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L T + SVNL L Q N+ I + + + Sbjct: 665 CHQLTTWQQECSTKYDSGCCMYSSCQFPTDNFTVSVNLSSKHLSQPNLLEEINTILEETN 724 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 P + LEITE N + + +L ++ IDDFGTGY++ L + D IK Sbjct: 725 CQPSYLELEITETLIMENVSLATQILNKLKNKNIKLLIDDFGTGYSSLSYLHQFPIDSIK 784 Query: 662 IDGVFVKDIVTNTLDAM--IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 ID FV + ++T IV +I LA L ++AE +ET+ Q L KL QGY Sbjct: 785 IDRSFVSRLDSDTSGQTCKIVGAIIGLANNLGLEIIAEGIETRTQMQKLKKLQCNKGQGY 844 Query: 720 LIGRPQPLAD 729 L +P D Sbjct: 845 LFSKPLEGED 854 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 8/137 (5%), Positives = 33/137 (24%), Gaps = 11/137 (8%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---YENDFIAGYLVPVFFIIFTLGVGK 257 + ++ + V+L + + + ++ Sbjct: 126 SLEDTLIQRSLQKKALIFEYLYDGVILTDTQGNIVDWNSAATRMFGYSKTEVLGKSPAIL 185 Query: 258 LRYPFLNLT-----WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV--- 309 + ++ + NF++ +E + ++ ++ + Sbjct: 186 HKPEIASVLTKEIIERIKVNDKWIGEINFIRKDGSEGICETTVVPILDQQNQMVGSIGVN 245 Query: 310 RIYHRSEWLNRRWHLQA 326 R + + QA Sbjct: 246 RDITQQKRAQEFALQQA 262 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 97/563 (17%), Positives = 201/563 (35%), Gaps = 16/563 (2%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 L + + + E T + L Sbjct: 372 LLERAQNLTERSVQLEAERDLVTSLLDTAEAIIITQDDNGRVETLNRFGQQVLGISESEA 431 Query: 242 YLVPVFFIIFTLGV-GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 ++ + G + R +L + + G + S + + Sbjct: 432 KMMGFLELNHETGSLPQHRQLLAHLIERKEHKVQMEASIRSSNGQMLQISWLHSVLSVPG 491 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSF 352 + +L + +R A DPLT LPN + ++ + Sbjct: 492 GDIRVLTIGLDLTERMHAEKRLVWMANHDPLTALPNRLLFTEKVDEAIKRYQEKNGILAI 551 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 +D+ + ++ G + ++ + ++ + L +L G E ++L G Sbjct: 552 LFCDLDSFKDVNDSLGHPVGDELLQQAAERIQNIICNDGVLARLGGDEFTVLLEGRANIR 611 Query: 413 RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 ++++ + + + + + + + L+ + Sbjct: 612 EIENVAQHIIRAFRQSFFIDGYEIFSTISIGISLHPDHGDNVTSLIQHADVAMFDAKESG 671 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 L + Q ++ L+N +R AL++ + ++ QP + G + +L Sbjct: 672 KNQ-LRFYHDEQGSQRYERFSLVNDLRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQ 730 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + G+++P KF+PL + L VL + R VN+ ++ Sbjct: 731 HSEAGMISPAKFIPLAEEQGLIVPIGEWVLRESCRMGKIWHDQGMDFRIGVNIAGQQIMH 790 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +++ G + I P + LE+TE E ++ + + + G +++DDFGTG+ Sbjct: 791 ESLMGTVQTALDESGIRPHLLDLEVTENFLLKQPEITIPKLHKFREMGLSLSMDDFGTGF 850 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+L + +KID FV+DI ++ IV++I LAK+ L +AE VET +Q + Sbjct: 851 SSLSYLKKLPINTLKIDQSFVRDIGSDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLS 910 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L G +QGY RP P + Sbjct: 911 YLRTHGCHLIQGYYFSRPLPAEE 933 >UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Tax=Caulobacter RepID=Y091_CAUCR Length = 809 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 133/749 (17%), Positives = 249/749 (33%), Gaps = 42/749 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + L+ ++ F V L SP + S I +M ++ Sbjct: 57 LLLTGLVAGSSVWATHFIAMVAFTPGLKTGYSPTGTLLSLMIAALFMASGFAVAS----A 112 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 R G L + ++ + + V A + LG Sbjct: 113 QRSTTNDFAGGVLIGLGVAAMHYMGMSAFVTQGQLVWEHATVGMSAVLGVGGATAALLLA 172 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 R V + +V F I+ + + + + T + Sbjct: 173 GTARTIRRQAVGGGMLCLG--IVMLHFTGMSAITIVPDASLTVPDQLLSGGMLTLAVGSI 230 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 L + +Q L ++ + ND A Sbjct: 231 TSMIILGGLGAVAIESQTSRSALERIRRLANAAYEGLV----------VVQSGRINDANA 280 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE-TEYSLAFILAVLI 299 + V + L L L A + + V E + ++ Sbjct: 281 AFCDLVGAPLAELVGRPLFGEILTFDEADPSREDVRREGRLRPLVGGREIPVEVFSRLMD 340 Query: 300 SFS-----VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------Q 346 + + VR + A D LT L N +L+ Sbjct: 341 DGARVETSGLTVLAVRDLRERRAAEEKIRYLAEHDGLTGLLNRNSLQMRLAAAIDRVEAS 400 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV-L 405 + C+ +D+ + + +G + + R L +Q +L G E ++V + Sbjct: 401 GESLAVICIDLDHFKEANDQHGHLAGDALLVETARRLQSAVQAPSFAARLGGDEFIVVQI 460 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 +G + + L + + ++ L MG + + T + L+ Sbjct: 461 AGGDQPAVAAELAGRLIEMLAAPVPFDGQELAMGSSLGVSLYPDDGRTAEALMANADMAL 520 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 ++ + + ++ L +R + +L+++ QP+ + E G+ Sbjct: 521 YRAKESGRG-VYRFFKREMDDTIRERRNLARDLRQGIADNELIVHYQPLARAADGEVCGF 579 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + ++ G++ P F+P+ + L VL A R +VNL Sbjct: 580 EALVRWKHPTRGMIPPLDFIPVAEENGLIEALGDWVLRRACADAAAWEK---PLRIAVNL 636 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P+ L + + + +SP + LEITE F + + ++ N+ +L G RIA+ Sbjct: 637 SPIQLHNPALPTLVHEVLITTGLSPSRLELEITESALFKDYQRALDNLRRLKALGVRIAM 696 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTG+++ L+ D IKID FV++I + IVR++ L ++ + VVAE V Sbjct: 697 DDFGTGFSSLSTLQSFPFDKIKIDKSFVENIHRHDRATAIVRAVLGLGRSLEIPVVAEGV 756 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET++Q L LQGY IGRP P+ Sbjct: 757 ETEEQILFLRGEDCAELQGYAIGRPAPVD 785 >UniRef50_C0QA93 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA93_DESAH Length = 629 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 100/476 (21%), Positives = 185/476 (38%), Gaps = 31/476 (6%) Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH----LQALTDPLTLL 334 Q + + SL + + V +L + R LN A D LT L Sbjct: 127 QEIRRVLGETDSLLILKKPFDN--VEVLQLAHALTRKWELNNEIQGRLNQLAFYDSLTGL 184 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN + + + + +DN + ++ G + +++ + LL Sbjct: 185 PNRTLFIENLTTTLDKAHRYKHKAALLYIDLDNFKRINDTLGHSIGDDLLKATSKRLLKC 244 Query: 387 MQENEKL---------YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 ++ ++ + +L G E ++L + + + +H N + Sbjct: 245 LRTSDTVSRSPAGEMVARLGGDEFTVILPEVTRAEHAGVVALRIAKQLAEPLHLGNHQVI 304 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + F + E ++ LL S + E+ ++ K++ + N Sbjct: 305 VTPSIGISLFPQDGEDIETLLKNADIAMYFSKRMGPNM-FSFYEQSMNADALKRMTIENH 363 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL +G+ L+ QP + E G + +L ++ G + P +F+ + + + Sbjct: 364 LRQALGRGEFALHYQPQFDLVTGEVCGAEALLRWHNWELGNVPPIEFISIAEENGMIVAI 423 Query: 552 DLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 V+ + + T R +VN+ + + + + + PQ + +E Sbjct: 424 GEWVMRTACRQTRTWLDQGLPLQRIAVNVSVNQFTHTDFLNMVKSILEETTLDPQYLEIE 483 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE N + + L K RIAIDDFGTGY++ RLK + D +KID FV I Sbjct: 484 ITESLLVKNVPETTNILHALKKMNIRIAIDDFGTGYSSMSRLKEIPIDCLKIDKTFVDGI 543 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 D I+ +I +A+ +L ++AE VET Q L Q +QGYL +P Sbjct: 544 AIGKRDQSIITAIIAMAEGMNLRLIAEGVETTGQVDFLRVKQCQEVQGYLFSKPLS 599 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 123/619 (19%), Positives = 221/619 (35%), Gaps = 35/619 (5%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 L S P +I A L L L I A Sbjct: 126 WHRHALSLSRRGEPGRIELLVQGAGGRSIHAQLDGLMARANHDAPLLRIALTDISERKHA 185 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSV--LLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 + R +E T + V + + I L Sbjct: 186 ESELRLAATAFEAQEGMMITDAHGVIERVNKAFTQMTGYSAAEAIGQTA-------RLLH 238 Query: 255 VGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVR 310 G+ F W ++ + Y+ + + + + Sbjct: 239 SGRHDPAFYAAMWDSLQRTGTWQGEVWNRRKCGEVYAEWLTITAVQDEHRTVTRYVGTML 298 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + + A DPLT LPN R L+ + + + +D+ + Sbjct: 299 DISQRKAREEEIAQLAFYDPLTGLPNRRLLKDRLNQAMAISARSQREGALLFIDLDHFKD 358 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL-SGPETEGR-----LQH 416 ++ G ++++ + L ++E + + ++ G E +++L + T + Sbjct: 359 INDTRGHDKGDLLLQNVAQRLSGCVREGDTVARIGGDEFVVMLGADLSTATDEAASHARS 418 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + + F+ + +T+ LL + Q+ A Sbjct: 419 VAEKILAALNLPYLMSGEFVHCSASLGVALFNDHHDTVDELLKRADQAMYQAKAGGRN-T 477 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGG 531 L + V + L +R A+ + +L+L QP+ + G + ++ G Sbjct: 478 LRFFDTAVQQTMMLRAALEAELRLAVQRDELVLCYQPVIDHQNRLLGAEALVRWKHPRRG 537 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNI 589 +++P +F+P+ L VLE+ LAT SVN+ L + Sbjct: 538 LVSPAEFIPIAEDRGLIQAIGRWVLETACTQLATWAADPATADLVLSVNVSARELHEPQF 597 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R+I + P + +E+TE + + S+ +++L G R+A+DDFGTG+ + Sbjct: 598 VERVIEILACTGARPARLKIELTENAVLDHVDDSIAKMKRLKAHGIRLALDDFGTGHGSL 657 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL D +KID FV+D++T+T DA I R+I L +SVVAE VET Q+ LL Sbjct: 658 SLLKRLPLDELKIDRTFVQDLLTDTHDAAIARTIAALGLNLGISVVAEGVETPAQRDLLI 717 Query: 710 KLGVQYLQGYLIGRPQPLA 728 G + QG L G P L Sbjct: 718 ACGCRIFQGDLFGPPAALE 736 >UniRef50_A3WPN1 Signaling protein with a ligand-binding sensor domain, PAS, GGDEF andEAL domains n=1 Tax=Idiomarina baltica OS145 RepID=A3WPN1_9GAMM Length = 1135 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 102/549 (18%), Positives = 197/549 (35%), Gaps = 23/549 (4%) Query: 202 RDIAPSLGKEKRAFTLSW---LAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTL 253 DI+ + ++R L+ + + + + I GY Sbjct: 574 SDISDIINSDERIDMLATSLTNISDGICIFDRFFRKREINTAYERITGYQREQVIGQAFA 633 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVR 310 R + V + E L L + + S + + Sbjct: 634 LPHYDRDFTDQIKHTVLREGSWSGEVTDFNADGAELLLELTLDAVRNDSGEIKLIVASFS 693 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAPEQEAGKSFCCLRIDNLEFMSRH 366 + TD LT LPN + + + +D+ + ++ Sbjct: 694 DITERRNTENELRRLSNTDSLTGLPNRSYFQVSHSNLVRKRVAHALLLFDLDDFKRINDS 753 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NS 423 G + + + L L + + LY+L G E +++ + + + + Sbjct: 754 LGHEVGDELLCRVADRLAELGRRQDTLYRLGGDEFGILIEDNTDINVISTIAQQVNTEIA 813 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + +G + + T Q LL + + ++ Sbjct: 814 KAYRIKGHEIALGSSIGIVLYPHDAHTSQELLQKADTAMYHAKQRGGN-CYQFFNASMNE 872 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 ++++L + +R A+ + +Y QP G + + G ++P +F+P Sbjct: 873 NAIQRLVLESQVRHAIRTHQVEVYYQPKMEIATGHISGIEALARIRDEYGQFISPAQFIP 932 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L QVL + + + ++NL Q ++A I ++ + Sbjct: 933 LCEETGLIIPLSEQVLRTACRDMRQLLTLQGAPRSVAINLSARQFTQSSLALFIEQVLQE 992 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P+ + EITE S+ E ++ +E L G ++A+DDFGTGY++ LKR Sbjct: 993 EEMHPRHIEFEITEGMVMSDPERAIAMLENLADMGVQLALDDFGTGYSSLAYLKRFPMHT 1052 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV DI + D +V SI +A L VVAE VE + Q +L +L +Y+QG+ Sbjct: 1053 LKIDKEFVDDITFDERDRKMVESIIGMAHNLGLKVVAEGVEEKAQLDILEQLQCEYIQGF 1112 Query: 720 LIGRPQPLA 728 +P Sbjct: 1113 YFAKPMSAE 1121 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 99/561 (17%), Positives = 204/561 (36%), Gaps = 28/561 (4%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVP 245 + + S A + + +++ ++ + GY Sbjct: 261 SELEKVLVQRDLALQHSQRNLYLANKIIDSSLDGIMITHSNSTIMQVNPAFTQLTGYKEH 320 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--- 299 + ++ + A++ + + Y + + Sbjct: 321 EVIGKCPSILSSGRHDKSFYIKMWDAINKTGVWQGEICNRKKNGDIYIEWLTIIEIKEPN 380 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + + A D LT LPN R + + Sbjct: 381 NSDAIYAAIFSDITERKNAEDKIVQLAYFDELTGLPNRRLFNDRLKMALAAAHRDQHLLA 440 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + + + + E + L +L G E +++ Sbjct: 441 VMFIDLDRFKEVNDSLGHSAGDCLLTLVAARIEATLNEGDTLARLGGDEFVVLCE-INKI 499 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + ++ + + + + + LL +S Sbjct: 500 DAVASLADKILNNLNSPFQLDHVEVGVTASIGAAVYPDDGLDSETLLKHADIAMYRSKDV 559 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILAR 525 + + ++ ++ +++ +++ + ALD + LY QP + + G + +L Sbjct: 560 GRN-SFQLFKPSMNARSLERLAMMSRFQHALDNNEFELYFQPKQCLKSEQIMGVEALLRW 618 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTL 584 D G+++P +F+PL + L R DL V+ K L + R ++N+ L Sbjct: 619 HDPDLGMISPAQFIPLAEELGLIVRLDLWVINQAGKVLTLWQKEGLVAGRLAINISACHL 678 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q +A I + K Y++ + +E+TE S+ + ++QL K G IA+DDFGT Sbjct: 679 SQGKLANNIGTMLKHYNLPGSLLEIELTESSFISSFTQAKTQLQQLKKLGVHIALDDFGT 738 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+ L +L D +KID F+ I ++ IV ++ LA +L VVAE VE Q Sbjct: 739 GYSALSYLTKLPFDTLKIDASFIAKIPDEYGNSQIVAALIALASNLNLMVVAEGVEQPAQ 798 Query: 705 QALLHKLGVQYLQGYLIGRPQ 725 + L LG +QGY RP Sbjct: 799 KNYLISLGCNVIQGYYYCRPL 819 >UniRef50_Q21IJ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21IJ5_SACD2 Length = 820 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 114/650 (17%), Positives = 228/650 (35%), Gaps = 45/650 (6%) Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI- 178 + GL+ + +++ + I L I Sbjct: 152 QSSAVVIAFGLIRSSLLVFFLFIAFYYLLTKPLIQIALQVKQINPGSPGEQRLSRPAGIH 211 Query: 179 ---YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL------------ 223 L +++ + A R E+ + + Sbjct: 212 DDELTQLVASTNQLLDAVDLALAKRRAVEVVLRKSEEHVRQIIDSLPVWVGARNKDGHYI 271 Query: 224 -SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + L + D + G + F F ++ + + + + + ++ Sbjct: 272 FANQALADFLHTKPDAMRGSHISDFAEFFVTDPQQIIDLDAEVIKS--RISAQIWEEKWI 329 Query: 283 QGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 E + + + V L+ + + + A D LT LPN L Sbjct: 330 TNDGEERDMHTHVMPMEFYDEVVSLV-VSSDITELKRTQAQMEHMAYHDALTDLPNRSYL 388 Query: 341 EQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + E+E + + +D ++++ G ++ + + L + +EN+ Sbjct: 389 VERLEEEVRKANHGQYYGALLFIDLDQFKYINDSLGHPAGDGVLKHVAQRLTAVTKENDL 448 Query: 393 LYQLPGSELLLVLSGPETE--------GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRF 444 + +L G E ++VL+ E + + S +N+ L + + Sbjct: 449 VVRLGGDEFVVVLTNLGDELPTSILRAEDIGERLRRYISEPHFYNDLQLHVTCSVGIVMY 508 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + LL Q A+ + ++ + +++ + AL+Q Sbjct: 509 PEEDAGVHELLRYADTAMYQVKEQGRD-AIQFFNKYMADKARNVLVMEGDLHKALEQHRF 567 Query: 505 LLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LY QP + + G + +L D G+++P +F+P++ L VLE ++ Sbjct: 568 SLYYQPRVDVTTSQIVGAEALLRWEHPDRGMISPAEFIPILETSGLIVEVGRWVLEDSIR 627 Query: 562 WLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + R VN+ P + ++ + I+P + +EITE Sbjct: 628 QVKIWQEQGIWKDDMRLGVNISPRQFRSSEFVNDVTKILQEVGINPSLIEMEITEGIVIH 687 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N E ++ + L + G A+DDFGTGY++ LK+L I+K+D FV+DI + D + Sbjct: 688 NLEETVATMSSLCELGINFALDDFGTGYSSISYLKQLPVAILKVDQSFVRDITFDRNDRV 747 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +V +I+ + L VVAE VET Q L+ + +Y QGYL P Sbjct: 748 LVETISAMGNMLGLDVVAEGVETCDQLHLVREYNCKYYQGYLCSPPVNAD 797 >UniRef50_D1RFR0 Response regulator/GGDEF domain/EAL domain protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RFR0_LEGLO Length = 750 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 106/561 (18%), Positives = 205/561 (36%), Gaps = 30/561 (5%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---CTPYENDFIAGYLVPVFFIIFT 252 Q + + +L+ L + F++ + +P + Sbjct: 178 LQKTVAEQTKSLQQSLSILRSTFESSTDGILVTDLNYKIIDCNSRFVSMWAIPKAMLEIN 237 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ---------GVETEYSLAFILAVLISFSV 303 G+ L + L L LN + + + L + Sbjct: 238 DGLIILYHMLNQLFKPKKYLEELNRLKKNINQISSTVVSFKNGKTLECYSLPHRLYDVII 297 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 ++ L +R QAL DPLT LPN L + + Sbjct: 298 GRVWSFHDITERANLEKRLTYQALHDPLTQLPNRALLIDRIRASIDNAQNLKLKFAILYC 357 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ + +R I + L+Q+ + L ++ G E +++ + + Sbjct: 358 DLDRFKLVNDSLSHEVGDTLLRMIGQRWGLLVQDGDILARMGGDEFVMLC-HIDDVDTVY 416 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + N + N L + + + ET LL Q+ Sbjct: 417 TIANKILNSLKEPFKITNRNLFITTALGISIYPQDGETANDLLKNADLAMYQAKEQGGNQ 476 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKE-GEGYDEILARLKYD 529 + + + LL + AL+ + L QP +++ + ++ + Sbjct: 477 -FSFYDVRLYEHYKQCFLLEAELHNALNNNEFFLAYQPQFNIDQQGLLSVEALIRWNHPE 535 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN 588 G++ P F+P + L +L + + + + +VN+ LLQ N Sbjct: 536 KGVIFPMDFIPFTEETGLIIPIGEWILREVCRQIDMWHKKNLPYVQVAVNITSRQLLQPN 595 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + Y ++P + EI+E ++ + +Y + QL + G +IA+DDFGTG ++ Sbjct: 596 FIDFVKNTLNEYQLNPHHLEFEISENVVITHPD-IIYMLNQLKQLGIKIALDDFGTGNSS 654 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK+L D IKID FV+ I T+ D +I+ +I +A++ + V+AE VE+Q+Q L Sbjct: 655 INYLKQLHIDCIKIDQSFVQSIPTSHSDGVIIEAIISMARSFNFKVIAEGVESQEQLDFL 714 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 K +QG+L P + Sbjct: 715 KKQHCDQVQGFLFSEPLTPKE 735 >UniRef50_Q1JVN0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVN0_DESAC Length = 635 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 111/552 (20%), Positives = 208/552 (37%), Gaps = 26/552 (4%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLVPVFFII 250 R+ + + ++ L A+ + +L GYL + Sbjct: 65 WSRRLRQALVKQVKLQEHYLDLFENASDLIQSVRLDGSILYVNRAWKETLGYLDHDIPSL 124 Query: 251 FTLGVGKLRYPFLNLTWAVSTL---CLLNYNQNFLQGVETEYSLA--FILAVLISFSVCL 305 V + +S L L F L L + Sbjct: 125 NIFDVISSADRPICRNRVISLLDGAELGPIEVTFQCKDGRAVLLEGNISLRQDEGQPHSV 184 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + R + ++ H A D LT LPN L+ + + + Sbjct: 185 RGIFRNISERKQAEQKIHQLAYYDTLTGLPNRVLLQDRLIHAIADARRFSHYLAVMFIDL 244 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + ++ R L +++N+ +L G E +++LSG + L H+ Sbjct: 245 DQFKKVNDTLGHSVGDLLLKDAARRLRSCLRDNDTAARLGGDEFVVILSGFKQISNLPHI 304 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + S+ L + + + + + L+ + H Sbjct: 305 ARKVLDVLSQPYFLAERELVVSASLGISVYPQDGDNAELLMRNADMAMYAAKYDHGN-GY 363 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 E ++ T+Q+ L +R AL +Y QP + ++ G + ++ + G Sbjct: 364 CFFSEEMNKNATRQLELEEQLRHALIDQQFEVYFQPQFDWSRQKLTGVEALVRWNRAQGE 423 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIA 590 ++ P+ F+P++ VL + C + SVNL ++ Sbjct: 424 VVPPEMFIPVVESTGQIVALGEWVLRQACLQIQQLQCQLNVPLQLSVNLSGRQFDDLSLI 483 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ ++ + + P+ + LEITE NA+S+ + QL + G R+AIDDFGTGY++ Sbjct: 484 YKVKKILQETNFPPEQLELEITETILMENADSARKTLGQLSQQGIRLAIDDFGTGYSSLN 543 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L D +KID F+ +++ + A IV +I +A LSV+AE VET +Q + L Sbjct: 544 YLNTFPVDRLKIDKSFLVNVMHDDNHAAIVATIISMADTLGLSVIAEGVETMEQVSFLSD 603 Query: 711 LGVQYLQGYLIG 722 LG Q +QG++ Sbjct: 604 LGCQAMQGFIFS 615 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 109/569 (19%), Positives = 208/569 (36%), Gaps = 30/569 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA-----LSVLLLLLCTPYENDFIAGYL 243 + + L + A E++ L+ + ++ L ++GY Sbjct: 269 LSRLQRCLEELVAQRTALLEKSEEKYRILAEYSPNWEYWVAPDGSHLYVSPACGDVSGYS 328 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN-----QNFLQGVETEYSLAFILAVL 298 FF L + +P WA + E L ++ + Sbjct: 329 PADFFADPALMAS-IIHPDDRTQWAAQQARAVPGEASATVLRIRTRDGGERWLEHVVKPV 387 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------ 349 + L + ++ D LT LPN + +Q Sbjct: 388 FSPAGQLLGLRGSYGDITQRRQAEQQLDYVTHRDALTGLPNRALFTEFLDQAVQKAAHSR 447 Query: 350 --KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 S + +D + ++ G + + R L L+ + + ++ G E +++ Sbjct: 448 GEFSLLFINLDGFKTINESLGRSAGDQLLIEVARRLRELLPGVDAVARVGGDEFNVIVEH 507 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + S +G ++ + + LL + Sbjct: 508 DVAGLGIDLVAQRIINALSHSYQLGAQSAYIGACIGIAQYPADGPAAESLLNSADAALHR 567 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A L ++ + +++ L +R AL QG+L L+ QP + G + Sbjct: 568 AKAQGRN-VLRFFSPELTIRARERLSLEADLRRALQQGELALHYQPQVDLRSGRIVGVEA 626 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLM 580 +L G + P F+PL + L VL + + + PR +VN+ Sbjct: 627 LLRWRHPQRGWIAPGAFIPLAEECGLIIELGDWVLRAACEQIRHWSDAGVAPRQTAVNIS 686 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + + + + R I+P + LEITE E S + L G +++ID Sbjct: 687 AVQISSGGLLDTVRRTLAATGIAPDRLELEITESFVMFERERSFKLLADLRALGVQLSID 746 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L++L+ +KID FV+++ N +A IV+++ + + L V+AE VE Sbjct: 747 DFGTGYSSLAYLQQLEVHKLKIDISFVRNMTRNRGNASIVKAVIAMGHSLGLEVIAEGVE 806 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q A L L +QGYL+ +P P+ D Sbjct: 807 EIEQAAHLLALQCDVMQGYLVSKPLPVDD 835 >UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V069_9PROT Length = 734 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 96/493 (19%), Positives = 184/493 (37%), Gaps = 25/493 (5%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSE 316 P LNL + + E L + + LL +V + + Sbjct: 233 PLLNLHQQAQVVLTSGIALRGIDAALGEKWLRLTITGIRLAEEEEEEDLLVIVEDITKLK 292 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 A D LT LPN L + + + +DN + ++ G Sbjct: 293 AQAVHIEQLAFYDSLTGLPNRSLLRDRVQRVLAHSARHKNHGAILFIDLDNFKALNDTKG 352 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS 423 + + + + L ++ ++ + ++ G E ++VL + + Q + + + Sbjct: 353 HNIGDLLLIEVAKRLQDCVRNSDTVARMGGDEFVVVLEELNEDTQQAVAQAQDIGETVLA 412 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 R + F N+ + + Q+ L + Sbjct: 413 SLNRPFNLQGFEHYSSASIGISLFRDNEIGMDDVFKHADTAMYQAKTSGRN-TLRFFDPD 471 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKF 538 + + +L +R AL L+ Q N + G + +L L G+++P F Sbjct: 472 MQASLEARAVLEIDLRHALSLQQFKLFFQIQMNAANQPIGAEALLRWLHPKRGLVSPLDF 531 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRL 596 + L L VLE+ + + + +VN+ Q + ++ Sbjct: 532 ISLAEDTGLILPIGQWVLETACTQIKAWEANPLACELQLAVNVSARQFHQPDFVEQVRAA 591 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++ P + LE+TE +N ++ + L + G R ++DDFGTGY++ L +L Sbjct: 592 LEKTGADPARLKLELTESVVLNNINDAVIKMSDLKEVGVRFSMDDFGTGYSSLSYLTQLP 651 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV +I DA+IV++I + + + V+AE VET+ Q+ L + G Sbjct: 652 LDQLKIDLSFVYNIGIKPTDAVIVQTIISMGNSLGMEVIAEGVETEAQRDFLERNGCHAY 711 Query: 717 QGYLIGRPQPLAD 729 QGYL +P + + Sbjct: 712 QGYLFSKPVSIGE 724 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 101/655 (15%), Positives = 213/655 (32%), Gaps = 28/655 (4%) Query: 102 AILRWQLGTRWRYGLTSRYV-WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 L Q G G + + R+ + + + + + + IS Sbjct: 477 LSLSTQTGLPGAQGPAATAINENRIVVVDDFLNDPMSLAWHEAAAQYALHGNISLPINAP 536 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 D ++ +L +S QI + K A + Sbjct: 537 DFRGALMVYADTVNFFDHEVILLLKELSEDISFALKQIHINTIKRQQETELKLAEQVFSR 596 Query: 221 AALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTL 272 +A ++++ ++ I GY + F +L ++ Sbjct: 597 SADAMIITNPDNNIVRVNQAFCEITGYTSEEVIGKNPRILKSEKQDHDFFRSLWRSLELQ 656 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + Y + + V + + D Sbjct: 657 GSWQGEIWNRRKNGEIYPEWSSINAVKDASGRVVNYFAVFSDL-LQKKALAELDHLKHYD 715 Query: 330 PLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN LE E + L +D+ ++ + + + Sbjct: 716 ALTDLPNRALLEDRIESSITHARQYERFIGVIFLNLDHFHTVNDMLSHAGGDQVLIATAK 775 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYG 438 L+ + +L ++ L T + ++ + + + + + Sbjct: 776 RLMDAAPAQASISRLSADTFVIALPDLNTSEEINRTAELIAQKIYQPLTVADQSVQLSAR 835 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + L+ + + ++ K + + +R A Sbjct: 836 MGISVYPIDGNDATTLMKHADAALADAKQCGVRNSFRFYSSSMNEHAHKLLTMGAELRNA 895 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + Q L+L+ QP + + G + ++ + GI++P +F+ + + L V Sbjct: 896 ISQNRLVLHYQPQVDIITGQIIGAEALIRINHPERGIISPGEFISVAEETGLIIPMGTWV 955 Query: 556 LESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 + + + ++NL PL L Q ++ + ++ + + LE TE Sbjct: 956 IREACRQMQQWHLDKNIELTIAINLSPLQLHQSDLPEIVSLALHDSGLNARYLELEFTES 1015 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 N ++ + + G ++IDDFGTGY++ LK+ D +KID FV +I + Sbjct: 1016 AIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQSFVSNITQDP 1075 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV++I L + ++ +AE VET+ Q L + + +QGYL P P + Sbjct: 1076 NDAAIVQAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLYSAPLPAEE 1130 >UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K9S9_CYAP7 Length = 1015 Score = 636 bits (1641), Expect = 0.0, Method: Composition-based stats. Identities = 104/561 (18%), Positives = 198/561 (35%), Gaps = 32/561 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRA--FTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 I A+ R+ + + + ++ G + + Sbjct: 446 DITERKQAEEALRQQANLLDLAYEAILVRDGNNVITFWNQGAEQLYGWKKSQALGQVSHI 505 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISFSV 303 L LT + T+ + ++ Sbjct: 506 LLQTEFNLSSPHFDAILRLT------GHWEGELTHTRQDGTKIIVESRQVLVQDDRGQIK 559 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCC 354 +L + R + + AL D LT LPN L + + + Sbjct: 560 GILEVNRDITERKLAQFQLEHNALHDALTELPNRLLLMERIQAAIQRAKRKPHYHFALLF 619 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G ++ H + +I L ++ + + +L G E +++L E Sbjct: 620 IDLDRFKTINDTLGHLVGDHLLVAIATRLQHCVRSGDTVARLGGDEFIILLDDLLEESDA 679 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP-LLGQLSWLAEQSCAHHH 470 + + + NN + F+ + + LL + Sbjct: 680 FPITERILGRIKEPLVINNQQIQTSASIGI-VFNRDGNESETDLLRNADLAMYSAKEQGK 738 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLK 527 + + + N +RTALD + LL+ QPI + G++ ++ Sbjct: 739 SR-YAVFNPTMHLRAHTLWEIENNLRTALDGQEFLLHYQPIFSLTTQTLVGFEALIRWRH 797 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR---FSVNLMPLTL 584 G+++P F+P+ + L VL+ + L G + S+NL L Sbjct: 798 PVRGLISPMDFIPVAEETGLIVPIGEWVLQEACRQLLHWQELNPGAKCCFMSINLSSRQL 857 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 N I ++ ++ +S + + LEITE N E++ + +L ++IDDFGT Sbjct: 858 ESGNFIAVIDQILQQTPLSAKNLKLEITETLLMKNLEAASALLLELKNRAIGVSIDDFGT 917 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L L D +KID FV + ++++I LA +L V+AE +ETQ Sbjct: 918 GYSSLSYLCHLPVDSLKIDRSFVAKMDKGRESLQVIQAIISLAHQLNLEVIAEGIETQDH 977 Query: 705 QALLHKLGVQYLQGYLIGRPQ 725 LH L +Y QGY + +P Sbjct: 978 LTQLHHLKCEYGQGYFLSKPL 998 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 636 bits (1641), Expect = 0.0, Method: Composition-based stats. Identities = 121/562 (21%), Positives = 203/562 (36%), Gaps = 36/562 (6%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLL--LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + E R +L L++ + N + G + V + Sbjct: 280 LLQSELRLSEARFRSLCDLSSDWYWEQDAEHRFVHFNQGLNGLGIAVDEAVGRTRWELGA 339 Query: 260 YPFLNLTWAVSTLCLLNY------NQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVR 310 WA L ++ + + + R Sbjct: 340 PNLSAEDWAEHRRVLAARQPFRDLELQRTAADGRVSWVSVSGIPVFSADGAFLGYRGVGR 399 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEF 362 + ++ A DPLT LPN R A+ A + + + L +DN + Sbjct: 400 DITERKRVDAEIERLAFFDPLTGLPNRRLLTDRLRRAIGTAARERSHGALLFLDLDNFKD 459 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHM 417 ++ G M + + LL + + + G E +++ G + Sbjct: 460 LNDTLGHDMGDRLLVQAAQRLLACAGAGDTVSRFGGDEFVVLAEGLPGDMHRARADAAVL 519 Query: 418 VNIL---NSRQIHWNNT-GLDMGYGAAWGRFDGNQETLQP---LLGQLSWLAEQSCAHHH 470 N + R F G LL Q+ A Sbjct: 520 ANRITAALGRPYAVGGMGHHHSTPSIGLALFGGGTGDGAGVDDLLKHADLAMYQAKAAGR 579 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKY 528 + + + + L + +R AL+ +LLL+ QP+ + G + ++ Sbjct: 580 N-TIRFFDPSMLQAVLARAALESELRLALESDELLLHYQPLVNGDGSMLGAEALVRWRHP 638 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQ 586 G++ P +F+P Q L VLE L +VN+ Q Sbjct: 639 QRGLVMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWSRSAATAQLVLAVNVSVRQFRQ 698 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + ++++ +R P+ + +E+TE ++ E + +EQL G AIDDFGTGY Sbjct: 699 PDFVDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGTGY 758 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKRL D +KID FV+D++T+ DA IVR+I LA++ L VVAE VET Q Sbjct: 759 SSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQLK 818 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L + G + QG+L GRP P A Sbjct: 819 FLQRHGCKAFQGHLFGRPAPAA 840 >UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Rhodopseudomonas palustris RepID=Q2J3Q8_RHOP2 Length = 743 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 111/587 (18%), Positives = 213/587 (36%), Gaps = 29/587 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 T+ +L SL L + L R + + R R Sbjct: 146 TLRELASLVADQLDLRLANRRLAREVAERERTENHLRSMSRTLELSNLRLDAALNNFLHG 205 Query: 225 VLLLLLC---TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL-----TWAVSTLCLLN 276 + + F Y + I + + ++ +W+ L + Sbjct: 206 LCMFDGDRKVVVSNARFAGIYSLRPDEIRCGVSLSAIQSACRERGTFVESWSERRLGRCS 265 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + + ++ ++ + + + ++ A D LT L N Sbjct: 266 DDISEVSSLQDGRTILVRCQPVAG--GGWMTVHEDITERYRSEQQIAHMARHDLLTGLLN 323 Query: 337 FRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 A + ++ S L +D + ++ G +R++ L ++ Sbjct: 324 RGAFHERMDEACARLRRWGETFSVIMLDLDRFKLVNDSLGHPAGDALLRAVVSRLKACIR 383 Query: 389 ENEKLYQLPGSELLLVLSGPETE-GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRF 444 E + L +L G E ++ + + + + + I + L + A Sbjct: 384 ETDVLARLGGDEFAVLQTRTKDSYNEAVAFADRIVNCLIDPIEIDGHQLVISTSAGIALA 443 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + L+ ++ A + E + + + L +R A+ + Sbjct: 444 PQHGTDSDELIKNADLALYRAKAAGRN-GYVTFETAMKDRANARQQLEGELRQAILNREF 502 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LY QP + G + +L G + P +F+P+ + L + VL+ Sbjct: 503 DLYYQPQVEARSGRVIGAEALLRWRHPRRGFVPPSEFIPVAEETGLIEKLGEWVLKEAAA 562 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 P + ++NL P+ L + N+ + + + + P+ + +EITE + Sbjct: 563 EAIRWPA---PIKLAINLSPVQLSRGNLTDTVTQALRLSGLPPERLEVEITENVFLEDEV 619 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 +++ I QL G +A+DDFGTGY++ L R D IKID F +++ + A IV Sbjct: 620 NNLAVIRQLRSLGVSVALDDFGTGYSSLSYLTRFPFDQIKIDKFFSMNLIERSDCATIVS 679 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 S+ LA+ +S VAE VET +Q LL + GV Y QGYL G P P + Sbjct: 680 SVITLARGLGISTVAEGVETVRQFELLREAGVDYFQGYLFGHPVPAS 726 >UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5H0_9RHIZ Length = 684 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 120/656 (18%), Positives = 226/656 (34%), Gaps = 34/656 (5%) Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 CAI + WR + +R R W L G+ + + F L T Sbjct: 22 MCAIGSFATTRLWRNAVAARQ-RDRFHWCFL---TGVTGGSSIWATHFIAMLGYQTPVPA 77 Query: 160 ADAI-FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF--- 215 TV+ ++ + L R+I L A Sbjct: 78 TFDPKLTVISIVIAILGTSLGIALTTSSNRLIARLVGGATLGLSIAAMHFVGMFAYRVDG 137 Query: 216 ---TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL-TWAVST 271 LS++ + + ++ G P F V L + L A+ Sbjct: 138 IVSWDQTYIVLSIVASIGFSVLATFYMTGGRAPAFLSRTNAAVISLILAIVLLHFTAMDA 197 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE---WLNRRWHLQALT 328 + +S + L++ + + A Sbjct: 198 FSVAPIAGLSSGADSGAFSAMAMSVALVALLIVFTGFSSEVIEFRNKTRSEIDLNYIATH 257 Query: 329 DPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT +PN R + A S + +D + ++ G ++ + Sbjct: 258 DELTGVPNRRKFSEILADRCAKTRDTGAEFSLIMIDLDRFKPVNDTLGHTTGDAVLKRVA 317 Query: 381 RTLLPLMQENEKLYQLPGSELLLV-LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMG 436 L +++ ++ L +L G E ++ L + + + + SR N +++G Sbjct: 318 NRLEHVIRASDFLARLGGDEFAIIALGSTGDRSNVLRLCDRIIDVLSRPFIINGHVIELG 377 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + T L + E ++ + + L +R Sbjct: 378 ASLGVAIAPAHGTTADDLTQSADIALYAAKDAGR-STYKLFETAMADEVQLRRSLEIDLR 436 Query: 497 TALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL++ + +Y QP + + G + ++ G+++P F+PL + L Sbjct: 437 RALNREEFEVYYQPQVDAKSGDYSGAEALIRWRHPQRGMLSPVVFIPLAEELGLIGPIGN 496 Query: 554 QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + T P +VNL P ++ + + + + + P + LEITE Sbjct: 497 WVLRQACRDAVTWPS---HLSVAVNLSPAQMMDRRLPKSVKSILNETGLDPARLELEITE 553 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N ++ + +L G I++DDFGTGY++ L R + IKID F+ I T+ Sbjct: 554 TSLIGNDVQALAVLNELRAMGIAISLDDFGTGYSSLSYLHRFPINRIKIDRSFIDRIPTD 613 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A IV++I L + + + AE +E ++Q + G +LQGYL +P P ++ Sbjct: 614 VDSAAIVQAIAKLGGSLGMKITAEGIENEEQWSFSKTEGCDHLQGYLFSKPIPGSE 669 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 35/295 (11%), Positives = 72/295 (24%), Gaps = 6/295 (2%) Query: 6 NLIKNIKIFTLAFTLTVVLI-QLSRFISPLAIIHSSYIFLAWMPLCVML-SILFIFGWRG 63 + I+ F + + P + S I + L + L + R Sbjct: 53 GVTGGSSIWATHFIAMLGYQTPVPATFDPKLTVISIVIAILGTSLGIALTTSSNRLIARL 112 Query: 64 VVPVLCGMFCTNLWNFHLSFLQT--AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 V G+ + + + V V+ +I L T + G + Sbjct: 113 VGGATLGLSIAAMHFVGMFAYRVDGIVSWDQTYIVLSIVASIGFSVLATFYMTGGRAPAF 172 Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 R + + I + F G F+ + + A+LI Sbjct: 173 LSRTNAAVISLILAIVLLHFTAMDAFSVAPIAGLSSGADSGAFSAMAMSVALVALLIVFT 232 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 F + ++I T E I Sbjct: 233 GFSSEVIEFRNKTRSEIDLNYIATHDELTGVPNRRKFSEILADRCAKTRDTGAEFSLIMI 292 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 L + TLG + A ++ + + E+++ + + Sbjct: 293 DLDRFKPVNDTLGHTTGDAVLKRV--ANRLEHVIRASDFLARLGGDEFAIIALGS 345 >UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5V4_NITSB Length = 793 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 101/569 (17%), Positives = 213/569 (37%), Gaps = 26/569 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYENDF 238 + F + R+I + A + + Y + Sbjct: 223 LFFTPINRLIEAQKQAIERATVMKNVIQNSDDAVLITDHAKNIVDCNRAFEKMSGYTKEE 282 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 I G F + + N+ + + + + + + Sbjct: 283 IIGKKPEEFLKSGLQDSSFYQKMWKNILKKGE----WSGEIVDKRKDGSLFYALQSIFAI 338 Query: 299 IS----FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 + + A DPLT L N + Q + Sbjct: 339 KDPLTNKITHYAAITKDITELAKKQETIQKLAFYDPLTKLANRVSFLQTLDEFIALGKRE 398 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + +DN + ++ G +++ + L L++E + +L G E +++ Sbjct: 399 SFPFALLFIDLDNFKEINDTLGHDTGDKLLQAFVKRLKSLLREEDIAARLGGDEFVVLAP 458 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 G + + + L + + ++ + + F + + LL Sbjct: 459 GISSPSKALELACRLQNAFQQPLMVDDRPITVQMSIGIALFPQDAKNANELLKAADIAMY 518 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 ++ + +E + + ++V L ++ A+++ +L+LY QP + EG++ Sbjct: 519 KAKEK-KNRCV-LFQENMQQEALEKVTLKQELKKAIEKNELMLYLQPKISVRTKKVEGFE 576 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ G + P KF+PL + L + + + + L + ++N+ Sbjct: 577 ALIRWNHPTRGFIPPSKFIPLAEESALIIPLTEWIFQEVDRLLDQLQQNGIESPIAINIS 636 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + +I K+ +I + LE+TE + +M+ +++LH FG ++A+D Sbjct: 637 ARHFATDKLIEQITTNIKKEYIQKGLIELEVTESAVMEDINKAMHYLQKLHSFGIKVALD 696 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ + LK+L D IKID F+ I+ + D IV S ++A + VAE VE Sbjct: 697 DFGTGHSSLQYLKKLPIDTIKIDKTFIDHIINDNKDQAIVESTIEMADKLGMDTVAEGVE 756 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T++Q L K+G+ Y+QGY +P P + Sbjct: 757 TKEQAQFLEKIGIDYIQGYYYAKPMPFEE 785 >UniRef50_C6P797 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P797_9PROT Length = 830 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 86/500 (17%), Positives = 177/500 (35%), Gaps = 22/500 (4%) Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLL 306 I ++ + ++ L + + + L Sbjct: 321 IHHEDTQRISDHIQFELDSSEADFVVETEIRTLCADGSMRWMRIRFKSQSDEHGRKYKLT 380 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 + + + QA DPLT LPN R + E + + +D Sbjct: 381 GVSQDITEKKRSEETIWQQANFDPLTGLPNRRMFQDRLEHEIKKSNREGLPLALMFIDLD 440 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + + + ++E++ + +L G E ++LS + ++ + Sbjct: 441 KFKEVNDTLGHDKGDILLVEAAQRISGCVRESDTVARLGGDEFTVILSELDDANSIERIA 500 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + L+ L+ S + Sbjct: 501 QAIIQALVAPFLLAEEVAFVSASIGITLYPNDAPNLELLMSNADQAMYASKSAGRNR-FS 559 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 + ++ L+N +R AL + L+ PI + + ++ G+ Sbjct: 560 YFTPSMQAAALNRMHLINDLRDALSRNQFRLHYHPIVELSSGNIHKAEALIRWDHPVRGL 619 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN--I 589 + P +F+ L + + V ++ + + + SVN P+ + Sbjct: 620 INPAEFVALAEESGMIVEIGDWVFRESVRQVLRLREEHHPEFQISVNKSPIQFRNDDRYF 679 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + ++ + + + +EITE ES + L G ++A+DDFGTGY++ Sbjct: 680 RDWLPH-LQQLGLPGECITIEITEGLLLDATESVQAKLLDLRDAGIQVALDDFGTGYSSL 738 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+ D IKID FV+++ + D ++ +I +A L V+AE +ET Q+ LL Sbjct: 739 SYLKKFDIDYIKIDRSFVRNLTATSDDMVLCEAIIVMAHKLGLKVIAEGIETATQRHLLT 798 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 G Y QG+ RP P + Sbjct: 799 AAGCDYGQGHFFSRPLPSHE 818 >UniRef50_A5V028 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A5V028_ROSS1 Length = 892 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 98/572 (17%), Positives = 185/572 (32%), Gaps = 30/572 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF------ 238 + R I R + W L ++ ++ Sbjct: 314 AIFRDITVSFQMAQALRASEERYTLTVQATGDGVWEWELRTGIMTFSRRWKEMLGFQDQE 373 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 I F + L + + L + + Sbjct: 374 IGNLPSEWFNRVHPDDRDGLDVRLTAYLR--RLITSFEHEYRILHRDGAYRWMRCRGIAI 431 Query: 299 ---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------- 346 + ++ + +R A D LT L N Sbjct: 432 WDADGNAAHIVGSQTDITDRKLAEQRLWYNAFHDSLTGLANRARFMDRLGHVIARARRSA 491 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + L +D + ++ G ++ + +I R L ++ + L L G E ++L Sbjct: 492 SPPYAVLILDLDRFKLINDSLGHLVGDQLLIAIARRLEQSLRPGDTLAHLGGDEFAVLLE 551 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLA 462 ++ + H N + D + +L Sbjct: 552 DLSEPHAAVNVAERILHLFEEPFHLNEHEVFSSASIGIALSDNLRYHSPSDMLRDADTAM 611 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 + + + ++ + +R +++ + + QPI + G+ Sbjct: 612 HHAKMEGRAR-YAVFHPTMHDRARPRLQIEIDLRRGIERNEFFVVYQPIVELSTQRTVGF 670 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS--V 577 + +L GI+TP +F+ + + L VL + L+ + + Sbjct: 671 EALLRWRHPQRGIVTPAEFIAIAEETGLIVPIGQMVLREACRQLSAWKQRHPERTLAMNI 730 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL P + ++ R L Y + A+ LEITE + +++ ++QL G +I Sbjct: 731 NLSPRQIADPDLVHRTAALIDEYRLDADALRLEITETAIIEHGDAAGRVLQQLRALGVQI 790 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 IDDFGTGY++ L R IKID FV I + + IVRSI LA++ ++V+AE Sbjct: 791 CIDDFGTGYSSLSYLHRFPIATIKIDRSFVSQIHRSHENTEIVRSIISLARSLGMAVIAE 850 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET++Q L + Y QG+L A+ Sbjct: 851 GTETEEQLLRLRSMSCAYGQGWLFAHALEPAE 882 >UniRef50_Q2BRN8 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRN8_9GAMM Length = 690 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 105/615 (17%), Positives = 206/615 (33%), Gaps = 45/615 (7%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 D LK + + L + R+ ++ + ++ Sbjct: 53 PHIDSLLKGEGDAYATHLVIDLAGEHLLLRSEFTLVDKGTANPRLFITLRNSSKSAQQAR 112 Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVG 256 K +V++ + I G+ + F Sbjct: 113 E-----LKVFRNAVENTGSAVVITDPKGQIEYANQRFTEITGWNLEEIKGKRPNFLRSEK 167 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYH 313 + L V + + Y ++ + + + + Sbjct: 168 TTLETYKELWGTVLNHQQWRGTLLNKRKNGSTYWSLQNISPIHDELGNIINFVSVSEDIS 227 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLR------ID--------N 359 + + + + A DPLT L N R+ + +Q L ++ + Sbjct: 228 QIKEHDAQMEKMAYYDPLTNLGNRRSFRRTLDQ-------YLDSPQEQGLNALLLLDLDH 280 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + +I L ++ +++L G E ++ + N Sbjct: 281 FKQINDTMGHEAGDALLTTIASRLNFCTRQRTSVFRLGGDEFTIIFRNCNDRTHVIERTN 340 Query: 420 I---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L ++ IH + + + LL + Sbjct: 341 EVLSLLAQPIHIGPHEISITVSIGITLIGLDSPDASDLLRNADLAMYYAKKSGRN-TFAF 399 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 E+ + + + + + + +R+ALD L L QP N + + +L G + Sbjct: 400 YEQHMDEEAQRTLSIEHDLRSALDGNQLRLVYQPQISADNGKITAIEALLRWDHPLDGPI 459 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGR 592 PD+F+P + L V+ K + VNL + Sbjct: 460 PPDEFIPHAEETGLIIPIGRWVMAEACKAAKAIQDLGLPPIKVCVNLSTRQFDDPALISH 519 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + + P+ + LEITE + +++ + + + G +AIDDFGTGY++ L Sbjct: 520 IEEAIETSGLDPRWLELEITESMLMRDMSTAIDILNSIKQKGISLAIDDFGTGYSSLSYL 579 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K++ D++KID F++DI ++ + I +I + K LSVVAE VE Q Q A L++ Sbjct: 580 KKMPVDLLKIDRSFLQDIPSDRDNMAITSTIIAMTKQLGLSVVAEGVENQAQMAFLNRNQ 639 Query: 713 VQYLQGYLIGRPQPL 727 +QGYLI +P L Sbjct: 640 CTLMQGYLISQPVSL 654 >UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAJ7_CHRVI Length = 1030 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 121/725 (16%), Positives = 236/725 (32%), Gaps = 30/725 (4%) Query: 33 PLAIIHSSYIFLAWMPLCVMLSILFIFGWR-GVVPVLCGMFCTNLWNFHLSFLQTAVMLG 91 A + + L L L I + L L + + + G Sbjct: 282 AFAALIGAVAGLVVSLGTATLERLRIDDAVGAIPAHLFAGIWGTLAVALFAPVTDFELTG 341 Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 + + + + L + ++ RL+ L + L Sbjct: 342 GRLAQLEIQTLGILAVGAYAFGVSLAALWLLDRLYRLRVDPESERLGLNVAEHGASTEIL 401 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 + T + + + Y ++ + E Sbjct: 402 DLLTEMDTQRRHGDFSRRVFAEPHTEVGQIARQY-NHVLQRVSEEIHKREAILRDLTASE 460 Query: 212 KRAFTLSWLAALSVL-------------LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 R + +L + G + I Sbjct: 461 TRKSAILDAVLDCILTIDHEGHLLEINPAAARTLGCSRRAVLGRPLADILIPDEARPAYD 520 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS-VCLLYMVRIYHRSEW 317 + + + + +A + S + R R Sbjct: 521 EALAQGFVTEGRFVVNQRSHTILKRISGETFPAELTIARVKSGPYPEFNFHARDITRQRE 580 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMM 371 + RR H A D LT L N + Q + A + L +D + ++ G Sbjct: 581 VQRRLHQLAHYDGLTGLANRQFFRQNLSIHLMGPEPAQIAVLFLDLDRFKTINDTLGHAA 640 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 +R++ L +++ + + + G E ++ L G + + H + + Sbjct: 641 GDQLLRTVAERLRSVLRSEDLVARWGGDEFVVALLGVQDRDAVMHKAADIIARLAEPHPL 700 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + + L+ ++ ++ + +++ + +++ Sbjct: 701 AGRSIRVPTSIGAALYPEGGTSADLLIRNADLALYRAKSNGRGHC-QLFDPVLASEISER 759 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + N +R ALD+G+L L+ QP + G + +L G+++P F+P++ + Sbjct: 760 LEFENDLRDALDRGELELFYQPQVEVGSGRIVGLEALLRWRHPGKGMVSPTVFVPILEEL 819 Query: 546 NLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL + + PR +VN+ L+ A + R+ + Sbjct: 820 GLIELVGEWVLRTACRQHRVWRERGLSPPRIAVNVSGRQFLRLGFAETVERILTEEGTAV 879 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 AV LEITE + + + + +L + G IA+DDFGTGY++ LKR D +KID Sbjct: 880 TAVELEITETVLAHDTDVCIETLRRLKRLGLEIALDDFGTGYSSMSYLKRFPVDTLKIDR 939 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV + N DA I +I LA+ L +AE VET Q L + G Q+ QG+ RP Sbjct: 940 AFVAECDVNAEDAAICTAILSLARGLGLKTLAEGVETPGQLEFLRREGCQFYQGFFFRRP 999 Query: 725 QPLAD 729 P+ + Sbjct: 1000 MPVEE 1004 >UniRef50_C6MV72 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MV72_9DELT Length = 594 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 104/564 (18%), Positives = 203/564 (35%), Gaps = 22/564 (3%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGY 242 ++ S ++D ++ +L A +++ ++ + GY Sbjct: 11 SLQLGPSSEQRLTELQQDGERLAMLQEAIDSLPISAGITISDTDGKIIYVNAAESEMHGY 70 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + R L + + L ++ + + + + S Sbjct: 71 APGELIGKQASLLAPRRDVVLPRINHGT-IGLWKRESLNVRKDGLVFPVQLTSLPIKNAS 129 Query: 303 VCLLYMVR---IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 L MV + R+ A D +T LPN L + + Sbjct: 130 GRCLGMVTACEDITARKEFERQLETLAYYDTVTKLPNRALLMDRLHQALALAQREGRELA 189 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +DN + ++ G + ++ + L + E L + G E ++V++ E Sbjct: 190 LLFLDLDNFKDLNSARGHEVGDKFLQEVAARLASCLCEANTLARPGGDEFVIVINSGPDE 249 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + L + + + F + ++ LL Q+ + Sbjct: 250 EGVAATAARLQALFIEPFGIDGEEVYGSTSIGIALFPEDGSDVESLLRCADAALYQAKSE 309 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILAR 525 + ++ +T ++V L N +R L + + L+ QP + G + +L Sbjct: 310 GKG-GYQFFSQEMNERTMRRVALENGMRQGLARDEFFLHFQPQWDLKSFRLTGAEALLRW 368 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 + G++ PD+F+P+ + VL + +VN+ Sbjct: 369 QSAEFGLVGPDEFIPIAESSGVIFDLGELVLRQACLHAVRWEEFCPDLKVAVNISGRQFR 428 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + R+ + + P ++ LE TE AE ++ ++ L + G R++IDDFGTG Sbjct: 429 QPGFLETMARVVRETGVRPSSLELEFTESVIMERAEKNIDALQALKRMGVRLSIDDFGTG 488 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK D IKID F+ ++VT++ DA I +I +A + L V+AE VE Q Sbjct: 489 YSSLNYLKHFPIDAIKIDRSFIAELVTDSDDAAIADAIISMAHSLKLKVIAEGVENSDQL 548 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L QG+ P P + Sbjct: 549 HFLVGRKCDEAQGFYFATPMPGEE 572 >UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=Q21UE9_RHOFD Length = 1114 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 112/564 (19%), Positives = 216/564 (38%), Gaps = 33/564 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 ++ E R L+ L++ + + LGV Sbjct: 544 ITARKQSEERLRESEARFRALTELSSDWYWEQDAQFRFVRLDGSSQTSMRLPEDNYLGVT 603 Query: 257 KL---RYPFLNLTWAVSTLCLLNYNQ------NFLQGVETEYSLAFILAVLISFSV---C 304 + WA L + V +A + Sbjct: 604 RWETDAQGVSQAQWAAHRAVLQAHETFHDFEMLCTDAVGCLTWVAISGTPIFDVQGQFKG 663 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 + R + + A D LT LPN R L +Q + + Sbjct: 664 YRGIGRDISERKRAEEKIERLAFYDVLTDLPNRRLLMDRLQQALVSSAREHGAGALLFID 723 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETE 411 +DN + ++ G + ++ + + LL ++E + + +L G E +++L G + Sbjct: 724 LDNFKDLNDTQGHDVGDALLQQVAKRLLASVRETDTVARLGGDEFVVMLQGLERTQADAI 783 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 +++ + + ++ + FD Q+TL LL Q ++ + Sbjct: 784 TQVEQVGRKIMAQLNQPYRLGSAEHHSTPSIGVTLFDNQQQTLDDLLKQADLAMYEAKSA 843 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARL 526 L + + T++ L +R L + +L+L+ QP+ + G + ++ Sbjct: 844 GRN-TLRFFDPTMQALVTQRTALELELRHGLARDELVLFYQPVVDQDARVVGVEALVRWQ 902 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTL 584 G++ P F+P+ Q L VL L + + +VN+ Sbjct: 903 HPQRGLVAPLAFIPMAEQTGLILPLGQWVLRVACLQLVSWSAQAATERLTMAVNVSARQF 962 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q +++ + ++ +P+ + +E+TE ++ + ++ + +L G R ++DDFGT Sbjct: 963 RQPEFVQQVLTMLRQTGANPKRLKMELTESLLLTDTQDAIAKMSELRDVGVRFSLDDFGT 1022 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK L +KID FV+D++T+ DA I R++ L ++ L VVAE VET Q Sbjct: 1023 GYSSLSYLKLLPLQQLKIDQSFVRDVLTDPNDAAIARTVLALGQSLGLGVVAEGVETVGQ 1082 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 + L + G QGYL G+P P+A Sbjct: 1083 RDFLLQHGCTRFQGYLFGKPVPIA 1106 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 15/154 (9%), Positives = 34/154 (22%), Gaps = 6/154 (3%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 + F Q + R + +S L+ + + I + Sbjct: 417 AAALALQDRLGFIQNITSRVPGMVFQLRLKTDGRFQFGYVSDLVREIFRGVSPEQI---M 473 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 I+ + ++ + L + L Sbjct: 474 QDAAGILKLHHPDDVSEFIASIKASARELKPWRHEYRLRFEDGEVRWLLGQATPEREADG 533 Query: 304 CLL--YMVRIYHRSEWLNRRWHL-QALTDPLTLL 334 +L ++ + R +A LT L Sbjct: 534 TVLWNGLITDITARKQSEERLRESEARFRALTEL 567 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 95/584 (16%), Positives = 197/584 (33%), Gaps = 27/584 (4%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + + L L R++ + + + + + + + Sbjct: 302 ILEMIATGAPLDDVLDRLMRLMESQLTGILGSVLLLDKEGRHLRHGAAPSLAEGYINAID 361 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN--YNQNFLQGVETEY 289 + VF + +R P + ++ ++ + Sbjct: 362 GVAIGPKVGSCGTAVFRREPVVVADIMRDPLWDDYRDLAERYGYRSCWSTPIVSHQGAVL 421 Query: 290 SL----AFILAVLISFSVCLLYMVRIYH----RSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + + L+ + + H A D LT LPN L+ Sbjct: 422 GVFAMYSMTVREPAEAETRLINFTTRIAGIAIERKKAEDQIHFMANHDVLTGLPNRALLQ 481 Query: 342 QAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 Q + + +DN + ++ G ++++ ++ + + + Sbjct: 482 DRLSQAILHAQRYDRWVSVVFIDLDNFKLINDTLGHNAGDRLLKTVAERMVGCISSTDTI 541 Query: 394 YQLPGSELLLVLSG-PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 +L G E +LVLS P+ + + L + + + + + + + Sbjct: 542 VRLGGDEFVLVLSDQPKNVDLIAETLQKLRTAIAEPLQLGDHCVRATASIGIATYPKDGK 601 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L+ ++ A + + ++ LL +RTAL + L+ Q Sbjct: 602 APESLVANADAAMYRAKAVGRD-NFQFYAPEFNTRAHERFLLQEELRTALARSQFELFYQ 660 Query: 510 PIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + ++ G M P F+P + L VL + Sbjct: 661 PQIDLRSVQIVAVEALIRWNHPAHGAMAPVGFIPTAEETGLIVPIGDWVLHEACRQNKAW 720 Query: 567 PCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 SVN+ +KN+ R++ + + LE+TE + ++ Sbjct: 721 QDLGLEPITVSVNVSARQFSEKNLVERVVHALSESDLEGCYLELELTESLIMQDVGLAVT 780 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L G +I+IDDFGTGY++ LK +KID F+ D+ TN D + ++ Sbjct: 781 TMNKLQSLGVQISIDDFGTGYSSLSALKTFPIARLKIDKSFIDDVATNEDDQAVASAVIS 840 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L + + V+AE VET +Q A L K +QGY +P + Sbjct: 841 LGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQGYHFSKPVCSRE 884 >UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=8 Tax=Ralstonia RepID=B2UIB3_RALPJ Length = 916 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 97/578 (16%), Positives = 185/578 (32%), Gaps = 35/578 (6%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + + I E+R V+++ + + + Sbjct: 318 HFLDDVTHLAGVAIQKDNVERGLAESEERYRLAISNLHEGVVIISPDGVVQAANASAERI 377 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCL---------------LNYNQNFLQGVETEY 289 +G +L + + L Sbjct: 378 LRVRPGQLVGRNRLDPIQRVVDEYGKEIGSTMMPSGQVLRTGEPIFGRVYGLLLKTGELM 437 Query: 290 SLAFILAVLISFS----VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + + + + ++ + +R A D LT L N E Sbjct: 438 WVRQNIIPIRRHAEPTPSSVMLSFADITDIKRAEQRLRHLAAHDALTGLTNRSFFIAHLE 497 Query: 346 QE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + L +D + ++ G ++S L + + + +L Sbjct: 498 SAIESARDESRELALFFLDLDRFKSVNDTAGHACGDTLLQSAAARLTDCIGPGDVIARLG 557 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++++ R+ + L N +G + + + L Sbjct: 558 GDEFVILIDQRVEGKRIALLAERLLQAMREPFDTVNGRYYLGVSIGVALYPHDGISGSDL 617 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L ++ + A ++ + ++ +L N +R A + +L L QP + Sbjct: 618 LRSADAAMYRAKQNGRNRA-QFYTAELNARLQRRYMLENALRDARENNELQLVYQPKYDL 676 Query: 515 ---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-K 570 G + +L G ++P +F+P+ + L VL + Sbjct: 677 ASHRIVGAEALLRWNSAKLGAISPVEFIPVAEETGLIVPIGAWVLRRACEQAVIWYEALG 736 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R +VNL ++ I + + P A+ +EITE A+ + L Sbjct: 737 YDFRMAVNLSARQFQAGDVVPMIEQTLADSGLPPTALEVEITESLLMGGADEVRPMFDAL 796 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G RI+IDDFGTGY++ L+R +KID F+ I + + +I +A+A Sbjct: 797 TAQGIRISIDDFGTGYSSLSYLQRFPISNVKIDRSFITGIPHDPDSVALTEAIVAMARAL 856 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++V AE VE Q L K G Q +QGY IG+P Sbjct: 857 GMTVTAEGVEDADQVEFLAKAGCQEIQGYYIGKPVTAE 894 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 94/553 (16%), Positives = 201/553 (36%), Gaps = 27/553 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 + + A T+ + + + ++ I G+ Sbjct: 257 ERKRLEDNMRLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGFTADEVLGRNPRLLAS 316 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRI 311 F+ L + + ++ +AV+ + ++ Sbjct: 317 GRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFVAVISD 376 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + R A DPLT LPN ++ + + +D + + Sbjct: 377 ITTRKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNHNLVALLFIDLDRFKQV 436 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN---I 420 + G + ++ + L +++ + + +L G E ++L + + + Sbjct: 437 NDTMGHLAGDMLLQQVAERLSSCIRQGDTVARLSGDEFTIILEDVQDPRDAAVVGHKVLR 496 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 L + + + + Q LL ++ E Sbjct: 497 LLQEPVALTGGEAHISSSIGVSLYPTDAGDPQTLLKLADAAMYRAKHLGRNSC-QFHSEA 555 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 V+ + +++ L N +R A+DQG LL+ QPI + + +L + G++ P++ Sbjct: 556 VNAEAFERLALENALRGAVDQGQFLLHYQPIFDVKSGRAVAVEALLRWRHPEVGVVAPNQ 615 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 FL L + + V + + R +NL P L Q ++ + Sbjct: 616 FLALAEETGMIVPIGRWVFDQACRQAKLWRDAGHVDLRLHINLSPRQLRQPDLIEMVAAA 675 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + PQA++LE+ E A + G +AID+FG+GY+++ L+RL Sbjct: 676 LEVSQLPPQALVLEVMETCVIDKAFDPSALFARFAALGVGLAIDEFGSGYSSFAFLRRLP 735 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 I+K+ FV+++ ++ ++ IV +I LA+ ++VVA +E + Q L G + Sbjct: 736 VTILKVAQSFVRNLSSSEDESEIVTAIVALARGLHMTVVAPGIENKAQLDFLTGFGCDKV 795 Query: 717 QGYLIGRPQPLAD 729 QG+L+ +P P + Sbjct: 796 QGFLLSKPLPGTE 808 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/244 (9%), Positives = 49/244 (20%), Gaps = 18/244 (7%) Query: 102 AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY---LVGSFFDFPLKISTFFG 158 L + + +R + + + D Sbjct: 27 LYLLEDITSPFRVLKAELLSAALGLLDANIIDVVLLDLSLPDSFGMDTLDRLRAAHPLVP 86 Query: 159 DADAIFT---VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 T + L +L Y + ++ F I + E R Sbjct: 87 VVVLTGTNDEALALQALRQGAQDYLVKGQGDGNLVRRAIFYAIERSHAASALKRSEGRFR 146 Query: 216 TLSWLAALSVLLLLLCTP---YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 L A L V+L F++ + + L + Sbjct: 147 ALFANAGLGVVLADAHGRMVEANPAFLSMVGYGEVELRGEKFRDITHPDDIGLNDTLRAE 206 Query: 273 CL------LNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWH 323 L + ++ V+ + +V + L Sbjct: 207 VLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQPFTVTVVEDITERKRLEDNMR 266 Query: 324 LQAL 327 L A Sbjct: 267 LAAT 270 >UniRef50_A1WX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WX01_HALHL Length = 698 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 103/566 (18%), Positives = 193/566 (34%), Gaps = 26/566 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF--TLSWLAALSVLLLLLCTPYENDF 238 L R I + + T Y + Sbjct: 123 TLCCATLRDISRRKEMERRLQLSAKVFTATRDGILITDADSRILQVNDAFTRITGYAEEE 182 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + G + + ++ + T ++ + Sbjct: 183 LLGRT-----PRVLQSGHHDADFYRVMWESIHQQGSWSGELWDRTKYGTLQPKWVTISKV 237 Query: 299 IS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + + R QA D LT L N + + E Sbjct: 238 TGAYGEVINFIAVFSDLTELKRSQERLQFQAYHDALTGLANRLLFKDRMARALERSRQSE 297 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +D+ + ++ G +R + L + ++ L +L G E + L+ Sbjct: 298 EQLAVLFIDLDHFKDVNDSLGHTAGDRILRQVAHRLQARLGADDTLARLGGDEFSICLAE 357 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + R ++ + N ET++ L+ Sbjct: 358 IRDHRDALACAETVHQELERPFQYSQRWFQCRCSIGISMYPDNGETVEELIRNADSALHN 417 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A E ++ + +++ L +R L +G+L+ Y Q + G + Sbjct: 418 AKAEGRNTT-CFYAEELTERAQRRLDLAQEMRQGLQRGELIPYFQHQVDLTTGRVVGIEA 476 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLM 580 ++ + G++TP F+P+ + A +L + T ++ R +VNL Sbjct: 477 LVRWHHPERGLLTPGAFIPVAEEVGTMAALGEDILLQACQQGRTWLDQRREFGRVAVNLS 536 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 +I + R ++ + Q + LEITE + ++ + L + G ++ID Sbjct: 537 AAQFHNGDIEKTVRRTLEQTGLPAQCLELEITESTIMDLSPRTLERLAALRRAGVSLSID 596 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKRL + +KID F+ D+ T IV +I LA L VVAE VE Sbjct: 597 DFGTGYSSLLYLKRLPINRVKIDRGFIWDMGTTPESRSIVDTILQLAHVLGLEVVAEGVE 656 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQP 726 T QQ+ L G + QG+L RP+P Sbjct: 657 TIQQRDQLIDAGCRVAQGFLWARPEP 682 Score = 43.4 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 15/135 (11%), Positives = 29/135 (21%), Gaps = 2/135 (1%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + + L + S ++A +L I + Sbjct: 10 TSTRALSSSLTQTLFLQSEDGMLVLRDGHFVACNPAAARMLGWDDPQQLIGLRPEAISPQ 69 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYM 308 I G +L A + + +L L Sbjct: 70 IQPDGASAADR-VQSLLRAAVSEGAQRFEWIHTSPEGGRLWFEIVLTPLHLDDETLCCAT 128 Query: 309 VRIYHRSEWLNRRWH 323 +R R + + RR Sbjct: 129 LRDISRRKEMERRLQ 143 >UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30P04_SULDN Length = 770 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 93/437 (21%), Positives = 180/437 (41%), Gaps = 18/437 (4%) Query: 310 RIYHRSEWLN---RRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 R + + + + D LT LPN L E S L +D Sbjct: 326 RNINLQKKVQTAANELEHLSRHDHLTNLPNKTLLIDRLEHSINVASKNGQKVSILFLDLD 385 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ Y + ++ I R L L++E + + + G E +++L+ ++ + Sbjct: 386 RFKEINDTYNHEVGDKLLQDISRRLKKLIKEEDTIGRFGGDEFIIILNNSNETQTVEVVT 445 Query: 419 NIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 NI+ S + N L + F + + L+ ++ ++ Sbjct: 446 NIMSAMSEPFNVNKVKLHTTFSIGISIFPDDGNSRDILIRNADTAMYEAKSNGKNR-YQF 504 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIM 533 ++ ++ ++ L + +R A+ + +Y QP + G + ++ + G++ Sbjct: 505 YDKKMTELAFERTTLESNLRKAIQNEEFEVYFQPKIDARVDKVIGLEALIRWNHPELGLI 564 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGR 592 P KF+P L D ++ + + + S+N+ L N Sbjct: 565 PPVKFIPFAENIGLIIEIDRWMMREAAAQVLLWKKENIVCGKLSINVSAKQLEDDNYVEF 624 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + I P+ + +EITE ++ + + + G I++DDFGTGY++ L Sbjct: 625 LSQKINDIGIDPKDLEIEITEGLIMKHSLHVTSTLNAIRELGISISVDDFGTGYSSLSYL 684 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KRL D +KID FVKD+ + D IV++I LA SL ++AE VET++Q+ L G Sbjct: 685 KRLPIDKLKIDRSFVKDLPHDKDDIAIVKTIIALANNLSLELIAEGVETKEQRDFLLSEG 744 Query: 713 VQYLQGYLIGRPQPLAD 729 +QGY +P + + Sbjct: 745 CHNIQGYFYSKPLKVNE 761 >UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07PV4_RHOP5 Length = 928 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 120/722 (16%), Positives = 226/722 (31%), Gaps = 31/722 (4%) Query: 32 SPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLG 91 + ++ SS A P + + G + + +T + G Sbjct: 196 NGTVLVGSSARPGAAEPGGSIAASELFRFAAGNAGGTRELADAAGETTVWTVAETQAIGG 255 Query: 92 SQTFVVLC-----ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 +V+ A +L + WL I + + Sbjct: 256 VNLYVIAGHVKSDLVAAPNLRLAEDMAVLAVFSLLLIAGVWLLAEIGIRSQLGRIAKLAE 315 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 +S + +L+SL + + Sbjct: 316 RIAAGDLSARILPPFPKGELGNLMSLLNGAADSIQTQRRDIEHLNIRLLQSQQLEKTERE 375 Query: 207 SLGKEKR--AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK-----LR 259 L L A L++ E ++ +V L + Sbjct: 376 RLDIAISNITRGLLMYDADGRLVVCNRQYIEMHGLSPEVVKPGLPFCDLMAYRKQIGSFD 435 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 ++ +L S+ + L + L M + + Sbjct: 436 GDVEEFCSSIRRNLADGKISRYLLETGDGRSIESVTKPLP--TGGWLVMTEDVTQRRLYD 493 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQEA-------GKSFCCLRIDNLEFMSRHYGLMMR 372 R A D LT LPN + E + + ID + ++ G + Sbjct: 494 ERIAHMAHYDALTDLPNRVLFHERLESALDAREPDDQLAVFYIDIDQFKSVNDSLGHSIG 553 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN 429 ++ + L + + ++ G E ++ + +V + + Sbjct: 554 DELLKIVADRLRGCLAATDFAARIGGDEFAIIQTAVAKATDTTDLVERIYAAIRKPYDCA 613 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 L + L LL + A E + + Sbjct: 614 GHLLTADASIGIALAPQHGANLDQLLKNADLAMYGAKAEGR-RTYRFFEPAMEARVIALR 672 Query: 490 LLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 + +R A+ G +Y QP + + G + +L G+++P +F+P+ + Sbjct: 673 TMEIDLRQAIADGGFEIYYQPQLRLCDDKVTGCEALLRWRHPVRGMISPAEFIPVAEETG 732 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 L + VL P + SVN+ P+ + A ++ + Sbjct: 733 LINQLGEWVLVESCAEAVKWPG---DVKVSVNVSPVQFGSEGFALKVAAALANSGLPAHR 789 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE + E+++ + Q+ G IA+DDFGTGY++ L+R D IKID F Sbjct: 790 LELEITEAVLIRDDEAALTMLHQIRALGVGIALDDFGTGYSSLSYLRRFPFDKIKIDRSF 849 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +K+I A IV+++ D+A A+ ++ AE VET+ Q L +LG +QGYL P P Sbjct: 850 IKNIEDANGSAHIVKAVVDIAAAQRMTTTAEGVETEGQLNELRRLGCSEMQGYLYSPPVP 909 Query: 727 LA 728 + Sbjct: 910 AS 911 >UniRef50_Q2S7Q5 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7Q5_HAHCH Length = 832 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 102/548 (18%), Positives = 190/548 (34%), Gaps = 48/548 (8%) Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 W + ++ +IF++ G+L P +T L + Sbjct: 278 VWPMSELKENAFYLANQAAWLTLVLILVTSALIFSVVHGQLIKPISRVTQLAHLLGESHA 337 Query: 278 NQ------NFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 +F + + + S L + A D L Sbjct: 338 ETPPEAARDFQSTLRRRDEIGELARAFKSMDGNLRATAS----------KLTFIAYHDSL 387 Query: 332 TLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T L N RA+ +A + ID + ++ G ++ I + L Sbjct: 388 TGLANRHTFGAFLHRAIAEAARHHFRLGLLYIDIDGFKDVNDSLGHEAGDLVLKEISQRL 447 Query: 384 LPLMQENEKLY---------------QLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 +++ + + ++ G E +V++ + + H+V L Sbjct: 448 HNVLRAEDMVADMSAQYEAMEATKMSRIGGDEFAIVVNHLHSPMDISHIVKRLLDAMQAP 507 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + +G + + + LL S + + ++ Sbjct: 508 FQIESHSFLLGASVGIAVYPEDGKDAHELLKCADIAMYHSKRQGRN-GFEYFDTKMNHMA 566 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ +++ IR+AL +G LY QP + G + +L + G ++P +F+P+ Sbjct: 567 VERHQIISDIRSALQKGQFELYYQPQVSALAGNVMGCEALLRWRHPERGFVSPVEFIPIA 626 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK-NIAGRIIRLFKRY 600 + VLE + R SVN+ + +I Sbjct: 627 EETGQIIEIGRWVLEEACRQCREWQAQGLDEIRMSVNISAVQFSSSTDIVAVTREALAHS 686 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P + LEITE + + + + L G I++DDFGTGY++ L+ L D + Sbjct: 687 GLPPDCLDLEITETAMMQSDKVGVDKLNALKNLGVSISMDDFGTGYSSLASLRDLPIDQL 746 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV I ++ I+++I LAK S+ VVAE VE + Q L +QGY Sbjct: 747 KIDKSFVDKINHDSQGRAIIKAILALAKELSIEVVAEGVEERTQLDFLSLHRCDLIQGYY 806 Query: 721 IGRPQPLA 728 + +P P Sbjct: 807 VAKPLPAD 814 >UniRef50_C6BSB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSB1_DESAD Length = 938 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 100/558 (17%), Positives = 212/558 (37%), Gaps = 33/558 (5%) Query: 200 WRRDIAPSLGKEKRAFTLS-----WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 ++ E+ T++ W + + + I+GY F + Sbjct: 368 YKMMEKALRASEEEYRTIAEYTFDWEMWIGPTGAVKYVSPSCERISGYPKAYFMEG-PVR 426 Query: 255 VGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSLAFI---LAVLISFSVCLLY 307 V + + W + + + ++ + S+ L Sbjct: 427 VEHILHKNDREFWQKALRGTFPSADGTDMRLFRRDGLLRWVSLTGHQVFADDGTSLGLRI 486 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRID 358 +R + +++ ++ +AL DPLT L N + + +D Sbjct: 487 SLRDITKRKFMEKQLQYEALHDPLTGLANRTLCCDRILQAVERSRRRDNYYFAVVFMDLD 546 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + + + + LL ++E + + + G E ++VL + +V Sbjct: 547 RFKIINDSLGHNIGDKLLVEVSKRLLQTIRELDTVSRFGGDEFIVVLEELASPREGIRIV 606 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + I +++ + + ++ + Q+ + Sbjct: 607 RRIRDCLNDPIMIEGHKINIAASYGVLLSPTEYDKPEEIIQNANVAMHQAKESGRDR-IK 665 Query: 476 SREEMVSGQTTKQVLLLNTIRTA-LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + + + + + L + +R A L +L L QPI + + G++ ++ G Sbjct: 666 VFNKRMLEEAVQAMQLESDLRAAMLSGDELYLDYQPIYSLQSQSVVGFEALIRWEHPRRG 725 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKN 588 ++ P +F+P+ + L V+ + + + S+N+ P Q Sbjct: 726 LVMPGEFIPMAEESGLIFELGSWVVSEACRQMKSWQVNYDSASEMMMSINISPRQFSQPA 785 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I+ + + + + +EITE A+ S+ + +L G ++IDDFGTGY++ Sbjct: 786 LVDNILSKLSEFDLPARNLKIEITETAIMERAKQSVDMLNRLKSAGVLVSIDDFGTGYSS 845 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+ D +KID FV+ + +T + IVR+I +LA L+VVAE VE +QQ L Sbjct: 846 MSNLQEFPLDQLKIDLSFVRKMNESTENLEIVRAIVNLAHNLGLNVVAEGVEEIEQQDAL 905 Query: 709 HKLGVQYLQGYLIGRPQP 726 LG ++ QGYL +P Sbjct: 906 RDLGCEFGQGYLFSKPIS 923 >UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C313CD Length = 763 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 118/728 (16%), Positives = 242/728 (33%), Gaps = 47/728 (6%) Query: 29 RFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAV 88 I A + + ++F + ++L V LC + Sbjct: 41 LLILLWAHVPALFVFALATGNPLQHALL-----EVVPIALCALVGQREQLGRRGRAAAVT 95 Query: 89 MLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFD 148 + VL + + + + ++ W + G + + + Sbjct: 96 IGLLTCSAVLVHLWDGTIEAHFHYFVMVVALAAYEE--WFPYLLAFGYVVLQHGLMGMME 153 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 + D + + + F A L + + + A Sbjct: 154 PDSVYAHGTDDDRSPWFWAAIHGGFIAALGFASMVTW------------RANESVRAHLA 201 Query: 209 GKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 E+R A + + L+ L + GY + + Sbjct: 202 ASEQRFHRAFDDAPIGMALIGLDGRFREVNRSLASLTGYGAGKLVQLRLWDLSPADVRAE 261 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNR 320 + + + Q F + T + +++ S + + + + Sbjct: 262 DHAAWPPSAGMEAVEQRFQRADGTIGWGLWRYSLVQDESGIASHWVVQLLDVTSRKQFEQ 321 Query: 321 RWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMR 372 + QA DPLT LPN L + + ++G + + +DN + ++ G Sbjct: 322 QLAHQAHHDPLTGLPNRALLTKRLQEALDLAREHDSGVAVIFVDLDNFKVINDSLGHDAG 381 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN 429 +R++ L +++ + L + G EL + L + + + + Sbjct: 382 DRLLRNVSERLRRVLRPEDLLARFGGDELAVCLERVADTEPANRIADRMATALRAPFVLD 441 Query: 430 NTGLDMGYGAAWGRF-DGN-QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + + LL ++ + + + + Sbjct: 442 GEQRFVTASFGIALARPEDPDRSPDTLLRDADAAMYRAKERGKART-EIFDASMRRRAVD 500 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L + +R AL + L + QP + + +L G ++P +F+P+ Q Sbjct: 501 RLELESGLREALARNQLRVVYQPEVSLESGRIVAVEALLRWEHPQHGPISPARFIPIAEQ 560 Query: 545 FNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L VL + A + G +VNL L ++ + + Sbjct: 561 SGLIVPIGAWVLREACRQAAHWNAESGGDGVVVAVNLSVRQLGASDLEATVRGAIDGARL 620 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR-LQADIIK 661 + LEITE ++ +++ +++ L + G ++AIDDFG GY++ L+ L D++K Sbjct: 621 PADRLCLEITESAVMADPAAAIESLQTLKRVGVKLAIDDFGVGYSSLSHLRELLPIDVLK 680 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ +V D IV +I LA++ + VAE VET Q A L + QG+ Sbjct: 681 IDRSFIDGVVLREEDRAIVTAIVQLARSLGVDAVAEGVETSDQAAALRAMHCPIAQGFHF 740 Query: 722 GRPQPLAD 729 RPQP AD Sbjct: 741 ARPQPPAD 748 >UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVS2_RUBXD Length = 762 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 125/737 (16%), Positives = 239/737 (32%), Gaps = 32/737 (4%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 F L L + L+ S A+ + + L + + L Sbjct: 21 GYFLLPAGLAAAVYILTGASSAAAVALGALLHRPSRRLP-WFVLSLGPLLMSLADCLWSY 79 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + + + S+ +LG + +L+ + + L + G + Sbjct: 80 YWSRGSVPYPSYADALYLLGYV--FLGAGLLLLQHRTVSNGLDALVDPLMVAS---GGAL 134 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 G+ Y+ P K + + + L Y L Sbjct: 135 LYWGLIIGPYVHDPSLSLPAKAVSVAYPLLDVLLLAALARYLLGFGGRVPALYLLGLSFA 194 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 A ++ + ++ WLA +L P + G VP Sbjct: 195 VLLLADSVYGLQVLQGSYRDGSWVDAGWLACYVLLGAAALHPS----MRGLSVPQPGSAE 250 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS---LAFILAVLISFSVCLLYM 308 + R L + L ++ + + +I ++ + Sbjct: 251 PALLTNRRIALLTGAALTAPGLLAAQAALGVRIDAYPIAAGCVLIFALAVIRIRGIVVAL 310 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDN 359 +R E L R QAL DPLT L N + L +D Sbjct: 311 LRTLSERERLQERLEQQALHDPLTGLANRALFSDRLAHAASRANPLDCGRLAVLMLDLDG 370 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + S+ + ++ ++ + +L G E +++ G + Sbjct: 371 FKSVNDSLGHEVGDALLVSVAGRIRACVRPSDTVARLGGDEFAVLIEEISDVGAAVRVAE 430 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + G + LL + + Sbjct: 431 RILDRLGEPYSVGGVGRVAAASVGVAFGP--AREAKSLLRDADAAMYVAKERGKGR-YEV 487 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 E + +++ L +R AL++G+ ++ QPI + E + ++ + G + Sbjct: 488 FEPRMRNARAEKLRLEAELRAALERGEFAVHYQPIVSFATGEVVEVEALVRWERPGRGTV 547 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGR 592 P +FL + + L VL + + + +VNL L + Sbjct: 548 GPAEFLSVAEESGLIVPIGRWVLREACRQVREWQKGGSRELALAVNLSASQLHHPRLVRE 607 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + + LEITE+ A +A + +E+L G RIA+DDFG+GY+ L Sbjct: 608 VEEALGLSGLEARHLKLEITEQAAVEDAREAARRLEELSALGVRIALDDFGSGYSALSYL 667 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + D +KID F++ I + IV ++ LAK+ ++ V AE ET++Q A L LG Sbjct: 668 RTFPVDTLKIDRSFIEGIGRDLQATSIVGAVIALAKSLNMCVTAEGTETEEQLAHLRSLG 727 Query: 713 VQYLQGYLIGRPQPLAD 729 QGY RP + Sbjct: 728 CDLAQGYYFSRPASPEE 744 >UniRef50_Q07VY4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07VY4_SHEFN Length = 696 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 110/513 (21%), Positives = 174/513 (33%), Gaps = 34/513 (6%) Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-C 304 + II L+ + L G +L + F Sbjct: 186 LLEIIHPDDREFLKLTVKTALKHRQP---YDIEYRVLHGSGEIITLHDRTDITYDFGEPR 242 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 + + + + A D LT LPN R + + Sbjct: 243 INGTLHDISSRKKSEQEIAYYAFYDTLTDLPNRRKFLLQLDSAIASAKRHSTKLALLFID 302 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-------------ENEKLYQLPGSELLL 403 +D+ + ++ G + + ++ ENE L +L G E L Sbjct: 303 LDHFKRINDTLGHKAGDELLCETATRIKSSVRISDELSVGSRVDYENEHLARLGGDEFTL 362 Query: 404 VLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L E + + + S+ + + + E+ LL Sbjct: 363 LLCELEAFDNVAIIAQRVLDALSKPFVIQGQQTFISASIGISFYPDDGESGDILLQHADT 422 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD-QGDLLLYAQPIRNKE---G 516 + + + ++ + +R A+ +LY QP + Sbjct: 423 AMYEVKHNGKN-GYQLFSHEMHKSLMDRLKIEVELREAIRLGDQFVLYYQPQIDSANDNI 481 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RF 575 GY+ +L G++TP FL + L L R Sbjct: 482 VGYEALLRWNHPTRGLLTPIDFLAIAESSGLIIPIGEWALLEACSKAKQIHIADANFQRM 541 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL L NI + R + P + LEITE SN + ++ + L K G Sbjct: 542 AVNLSALQFNHANIFDHVKRALVETGLPPNLLELEITESAIISNVDEAIALLFMLKKLGV 601 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++AIDDFGTGY++ LK D +KID FV IV+N DA I R+I LA LS + Sbjct: 602 KLAIDDFGTGYSSLNYLKSFPIDTLKIDKSFVDGIVSNQKDAAIARTIVQLALNLELSTI 661 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE +Q LL +G LQGYL +P P Sbjct: 662 AEGVEYIEQHELLKAMGCTNLQGYLYSKPLPPE 694 >UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3I9_9PROT Length = 1123 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 117/571 (20%), Positives = 227/571 (39%), Gaps = 27/571 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDF 238 F + +L E + L + +++ + Sbjct: 544 FLRFCQQAAEIISEMLLREHIRQALEESENKHRQLVETTPMGIVIYSNNKICYINPAAVT 603 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSLAFI 294 + G + + + + + TL Y + F + + + Sbjct: 604 MLGASGAGEILGQAVLSFIVPDDREAASADLHTLQQGGYVQPTEERFQRLDGSTFWGELR 663 Query: 295 LAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-- 351 + S + +++ + + L + +D LT LPN R EQ + Sbjct: 664 GVPVEYESQPAVQLLIQDISSRKEAQEQLRLLSYSDELTGLPNRRLYSDRVEQACSMARR 723 Query: 352 ------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 L +D + ++ G ++++ LL ++ ++ ++ G E ++L Sbjct: 724 RKRPISLLFLDLDRFKLINDTRGHACGDMVLKTVANRLLQTLRVSDTAARMGGDEFAVLL 783 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 E + + L + + I N L +G F + E + LL Sbjct: 784 PETE-PDKALRVAGKLIAALNQPILIGNQELIIGASIGLASFPADGEDGETLLKHADSAM 842 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 + + L + ++ +++ L +++R A G L L+ Q + G Sbjct: 843 YYAKQN--RLNIHCFSSVMEAVAQRRMQLEDSLRLAAGSGQLSLHYQSQHSLAEGTITGM 900 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + ++ + G ++P +F+PL + L + + P R S+N Sbjct: 901 ESLMRWHHPELGNISPGEFIPLAEETGLIRSITAWAITEASRQALVWEEAGIRPERISIN 960 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L+Q+N+A I+ L + P+ + +EITE A + E+ + + +L + G IA Sbjct: 961 ISAAELMQQNLASEILTLIRGSGAKPEWIEIEITETAAMNQPETGIGIMRELVEGGVSIA 1020 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LK+L AD +KID F++++ + DA+IVR+I +A A ++VVAE Sbjct: 1021 IDDFGTGYSSLAYLKQLPADHLKIDIAFIRNLPDDAEDAVIVRTIIAMAHALGMTVVAEG 1080 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VETQ Q L + G +QGYL+G+P P + Sbjct: 1081 VETQAQLDFLRQEGCDGIQGYLLGKPLPADE 1111 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 107/565 (18%), Positives = 195/565 (34%), Gaps = 26/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + S A T + +L I GY Sbjct: 639 VASLVDDITRREAVEAELRLAATTFETDEAILIAGADGRILRVNAAFSRITGYRQEDVVG 698 Query: 250 IF--TLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 G F W ++ + Y + + Sbjct: 699 RNPRLFKSGLHGAEFYREVWRSLEQTGRWQGEIWNRRKNGEVYPERKTITAVRSANGDIT 758 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + + + A D LT LPN + + + + + Sbjct: 759 HYVAISSDISELKRTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREGTYGALLFM 818 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G M + + L +++ E +L G E +++L+ + + Sbjct: 819 DLDYFKTLNDSLGHHMGDRLLVQVAERLKNCLEDEEAAARLGGDEFVVLLAPAKPSASVA 878 Query: 416 --------HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 V L S ++ + F T + +L Q + Sbjct: 879 AGQAIVHARRVRELLSAPFQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTAMYVAKN 938 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILAR 525 + E + ++ L +R AL + +Y QP + G + ++ Sbjct: 939 EGRD-GVRFYESAMEAVVRGRLELEKALRKALANDEFEVYYQPQMLGDGRVVGAEALIRW 997 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTL 584 + G ++PD+F+P+ Q + R VL LA SVN+ P Sbjct: 998 FHPERGAISPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRARGLALPKLSVNVSPRQF 1057 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++ ++ ++ + +SP + LE+TE ++ E ++ I +L G +IDDFGT Sbjct: 1058 MRSDLMTQLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFGT 1117 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK L D +KI FV+D+ ++ DA IV +I +A+ L V+AE VET+ Q Sbjct: 1118 GYSSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDVIAEGVETRTQ 1177 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 +L + G QG RP P D Sbjct: 1178 VEILERYGCHRFQGNYFARPLPKDD 1202 Score = 42.3 bits (99), Expect = 0.078, Method: Composition-based stats. Identities = 15/153 (9%), Positives = 33/153 (21%), Gaps = 3/153 (1%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 + + + A+ R+ + L ++ E F Sbjct: 510 SGPVLQGTLQDVTERWEAERALRQSEERLRLHVEHLPLAVIEWDLDFIVSRWNPAAERIF 569 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 G + L + + VS + + L Sbjct: 570 GYGADRMIGRSAGILFPEDVLEQAEAIWREVSGGSGNRVVTANVTADGRTIRCEWYNTPL 629 Query: 299 ISFSVCLLYMVR---IYHRSEWLNRRWHLQALT 328 + ++ + R E + L A T Sbjct: 630 TTPDGTVIGVASLVDDITRREAVEAELRLAATT 662 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 110/570 (19%), Positives = 208/570 (36%), Gaps = 25/570 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN------ 236 F L+ + H ++ + E+ +L A V + + + Sbjct: 391 FRTLSALTHLMHASKDDIKMLNNSLSVSEQYYRSLFDNNADFVYSTDMQGNFTSINPAFK 450 Query: 237 -DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE--YSLAF 293 +F + + + YN Y L Sbjct: 451 RNFGFNEKEVIGKPALRFIDSRDVARVRRHFYRTVNGKEQYYNLEIQSKNGARNLYELKN 510 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------- 346 I + + + R + + + A D T LPN + + Sbjct: 511 IPITVEGEPAGIYCIGRNITEQKRIEQEMTQLAYYDKDTGLPNRLKFMEELDDLLQKAKK 570 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + + ID + ++ G +R I + ++ + G + L+L Sbjct: 571 KKRPLAVLFMDIDRFKLINDSLGHYAGDQILRQIAGRIEAILPPGSFFGRFSGDKFTLIL 630 Query: 406 SGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + R+ + N + +++ + + G+ + L+ Sbjct: 631 AKEADSSRVTKLSNHILQAISSPVYYGEQEFFITGSIGASLYPGDGHEKETLMKNADIAM 690 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGY 519 +S L ++ QT ++ L + +R AL + + L QP+ N E G Sbjct: 691 NRSKHQGGNR-LTYYSTEMNEQTLLKLELESYLRKALQKKEFFLCYQPLTNLETGAIYGS 749 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVN 578 + ++ G+++P F+PL + L VL++ + G SVN Sbjct: 750 EALIRWNHPKLGLVSPGDFIPLAEETGLINEIGHWVLQTACRQTKEWHNKGLGSLTVSVN 809 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + Q +++++ K + PQ ++LE+TE N E+S+ I++L + G R+A Sbjct: 810 VSVHQFQQPGFVHKVLQVLKETMLEPQFLVLELTESSMLRNMENSILVIQELQRNGIRVA 869 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LK L D +KID F+ ++ + + D IV +I + + VVAE Sbjct: 870 IDDFGTGYSSLSYLKHLPIDALKIDRSFIDNLRSGSPDIAIVNAIITMGLGLHVKVVAEG 929 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET +Q LL L + QG+ I RP Sbjct: 930 VETAEQMRLLKDLKCHFAQGFFIHRPLGAE 959 >UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C8S6_CROWT Length = 906 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 96/572 (16%), Positives = 192/572 (33%), Gaps = 42/572 (7%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + I + R + + ++ ++ Sbjct: 342 YIGSVMDISDRKRMEEQLRIFECIVATTQDMMALIDQNYTYQIVNDAYARNFQRAKEEII 401 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL--AVLIS 300 V I+ + ++ Y F G E Y A Sbjct: 402 GKSVVEIVGEEFMDTIQPHLDRCLQGEEV----RYETWFDLGEEQRYYHALYSPYREANK 457 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSF 352 + + + + ++ + QA D LT LPN + EQ + Sbjct: 458 GVTSAVVNIHDITQIKESEQKLYYQAHHDTLTNLPNRMLMNTRLEQSIQQATRKGDKLAV 517 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D + ++ G + + + L ++++ + ++ G E +++L + Sbjct: 518 VFIDLDRFKNINDSLGHRAGDSLLEQLAQRLCQQRRKSDTVARISGDEFVVILEDIKDTQ 577 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 +V L + M F + + LL ++ Sbjct: 578 HAGMVVGKLMRTFEEPFIIEGRTIKMTSSMGLSLFPDDGTDVATLLRNADAAMYRAKEDG 637 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 + ++ + +LL N +R AL + + L QP + G + +L Sbjct: 638 RN-TYCFYRKEMTSTVFEYMLLENALREALKKKEFYLLYQPQIEMLSHRCLGIEALLRWH 696 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLL 585 + G+++P +F+P+ Q L VL + + K R +VN+ + Sbjct: 697 HPELGVVSPAQFIPIAEQSGLIQEIGTWVLTTACRQAKIWLEQKLDFGRIAVNVAAPQIQ 756 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQA----------FSNAESSMYNIEQLHKFGF 635 + + + K + E ++ +E+L G Sbjct: 757 HGDFIQVVENVLKTTGLPAAY----------LELELTEGLLMKQTEQNIKQLEKLQGMGI 806 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++ IDDFG GY++ LKRL D +KID F++D+ +T D I +++ L A +L ++ Sbjct: 807 KLTIDDFGIGYSSLNYLKRLPIDKLKIDQSFIRDLPHDTNDTAISQAVIALGYALNLQII 866 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 AE VE ++Q A L + G QGY +P P Sbjct: 867 AEGVENEEQAAFLKEKGCHQAQGYFFSQPIPP 898 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 12/174 (6%), Positives = 31/174 (17%), Gaps = 11/174 (6%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 +I V L S + + I ++ + E ++ Sbjct: 187 ASIHWVQALGSAEKDDQGNVIRLLGIVMDITERKQLELEHKETEMALRESEALFRNMADH 246 Query: 221 AALSVLLLLLCTPYEN------DFIAGYLVPVFFIIFTLGVGKLRYPFLN--LTWAVSTL 272 A + V + DF + + Sbjct: 247 APVMVWVTDETGYSTYVSQSWYDFSGQKEGTALGFGWLDVIHPDERELARKRFLEFNEKR 306 Query: 273 CLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLYMVRIYHRSEWLNRRWH 323 + + F + + V + + + Sbjct: 307 QPFSIDYRFRRRDGVYCWGIDAGKPRFSADGQFKGYIGSVMDISDRKRMEEQLR 360 >UniRef50_A0YPT5 Serine/Threonine protein kinase and Signal Transduction Histidine Kinase n=8 Tax=Bacteria RepID=A0YPT5_9CYAN Length = 2038 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 111/602 (18%), Positives = 207/602 (34%), Gaps = 30/602 (4%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 + + + L F + + ++ +R++ Sbjct: 1439 LIGLLYLENNLICDAFQAERVELLNLLSTQMAIAIE---------NSRLVQHQEELNNSL 1489 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 +++ +R ++ + E ++ + Sbjct: 1490 QQERQQITRILERITDGFIGIDRQWKIVYINQKAEQILEKKSQQIKGKTLWEACSETMTL 1549 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 + F Y L + R + + Sbjct: 1550 LHEQQYREAQETGQSVCFEAFYSSSN--YWLEITVYPDQEGLSIF---FRDITGRKQMEE 1604 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMM 371 + A D LT LPN L + +Q + L ID + ++ G ++ Sbjct: 1605 KLISDAQHDALTGLPNRLLLSEHLQQMIQRTQEEQNYRYAVLFLDIDRFKVINESLGHLV 1664 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNT 431 + +I + L + + + + +L G E +++L PE E R + + + + N Sbjct: 1665 GDQLLIAIAQRLKGCITQQDIIARLGGDEFIILLDNPEDEVRTAARIQMALNAPFNLNGY 1724 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + + LL Q+ A + + + T + L Sbjct: 1725 KVFNTVSIGIVSSNTTYTRPEELLQSADIAMYQAKAEGRAR-YVIFDTTMQERATSLLQL 1783 Query: 492 LNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +R A++ L +Y QPI + G++ ++ L GI++P KF+PL + L Sbjct: 1784 ETDLRLAIEVEQLCVYYQPIVALKTGKLAGFEALVRWLHPKKGIISPIKFIPLAEETGLI 1843 Query: 549 ARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 VL+ L SVNL Q ++ RI ++ + Sbjct: 1844 IPIGQWVLQQACYQLKVWQEQFPQLEKLTMSVNLSVKQFSQVDLIPRIDQILSDLDLPGH 1903 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LEITE +N E + + QL ++ IDDFGTGY++ L + DI+KID Sbjct: 1904 DLKLEITESALMNNFERTRELLLQLKSRQIQLCIDDFGTGYSSLSYLHQFPVDILKIDRS 1963 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+ + + + IVR+I L+ S++ +AE +ET QQ A L +Y QGY RP Sbjct: 1964 FVRRLEGSNKNDEIVRTIIALSHNMSIAAIAEGIETSQQLAQLRNYRCEYGQGYFFDRPL 2023 Query: 726 PL 727 Sbjct: 2024 DA 2025 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 104/491 (21%), Positives = 191/491 (38%), Gaps = 22/491 (4%) Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 + P ++ L + + E + + +R Sbjct: 716 QSSIALPLAISKAEMAVLTIYAAEPDAFNLDEVALLEELASDLAYG-----IGALRTRVA 770 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRH 366 + R A D LT +PN L + + + L +D+ ++ Sbjct: 771 HKEAEDRLDFMAHHDALTGMPNRILLHDRFEQVAATARRRGSNVAMLFLNLDDFHLVNDV 830 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---S 423 G + H + + L ++E++ + + G E +++L ++ +V + S Sbjct: 831 LGRSLADHMLVQVVERLHGCIRESDTISREGGDEFIILLGDVGDLAAIEIIVQKILDAFS 890 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 ++ + + F + L+ Q +++ A + E ++ Sbjct: 891 EPFTVDDHIVSVTSSIGISIFPNDGRDFNRLISQSEAALQKAKAAGKD-TYNFFTEQMNI 949 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLP 540 + + L +R A+ + +Y QP + G + ++ G++ P KF+P Sbjct: 950 NALEHMQLQGQLRHAIINQEFRIYYQPQIDTLNERMIGAEALVRWQHPQHGLVPPLKFIP 1009 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 L + L VL + +VNL + + NI +I+ + Sbjct: 1010 LAERSGLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRGNIVETVIQALE 1069 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 R + + + LE+TE + E M + +L G +++IDDFGTGY++ LKRL D Sbjct: 1070 RSGLPAENLELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVD 1129 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+V + DA IV +I L L+V+AE VET+ Q LL L +QG Sbjct: 1130 KLKIDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQG 1189 Query: 719 YLIGRPQPLAD 729 YL RP P D Sbjct: 1190 YLFSRPIPAED 1200 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 22/203 (10%), Positives = 46/203 (22%), Gaps = 9/203 (4%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFP--LKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 LG++ L+ +F P L F ++ + ++ +F + Sbjct: 19 FVLLGVLFAALFWIGESLLHFYFFEPGNLSHDLFPTVYHEMWMRMFIVCMFLGFGFFTQR 78 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 RM + ++ + S W+ A L D I Sbjct: 79 IDDA-RMRAEIRRGEEQFKALMDVSPEAIAVHQGGLWVYANDAAAKLFGGKQPEDIIGRQ 137 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF-ILAVLISF 301 ++ + V + + LQ T L Sbjct: 138 VMEFVHPDDHIVVQERMRQLFE-----GEALTPKLEERLLQPGGTSILAEVYALRTEFDG 192 Query: 302 SVCLLYMVRIYHRSEWLNRRWHL 324 ++ + R Sbjct: 193 KPAVMVVARDIDERRRAELELQR 215 Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 38/184 (20%), Gaps = 16/184 (8%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK-EKRAFTLSWL 220 +I V ++ + + I A R E + W Sbjct: 430 SIVWVRMTIAPLRGEKGSSPQHLCMIEDITERKQADEALRESKDLLRSIIEHAPIRVFWK 489 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL--LNYN 278 A S L + + V F +G + + V L + Sbjct: 490 DAQSRYLGCNSAFAHDAGLTQPEELVGKSDFDMGWREQAELYRTDDHRVMASGEAKLGFE 549 Query: 279 QNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + L L S + LL + + + Sbjct: 550 EPQTTPEGRHIWLRTSKVPLRSAAGELFGLLGIYEDITQRKEAELELLQ----------A 599 Query: 336 NFRA 339 N Sbjct: 600 NRAL 603 >UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYI1_BACS4 Length = 774 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 99/489 (20%), Positives = 190/489 (38%), Gaps = 28/489 (5%) Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 K PF+NL AV + NY + L + ++ + H Sbjct: 296 ARKTLEPFVNLYDAVDKVAEGNYTKT----------LDVNVKDYPEMKNLIVRFNEMVHN 345 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRH 366 + +A D LT LPN +EQ EQ + + + +D + ++ Sbjct: 346 FNQSRKEVEYRANHDILTGLPNRYHIEQLLEQEIVTCDENDQSLALMFMDLDRFKILNDT 405 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---S 423 G + + L + EN + +L G E L++ + ++ ++ + + Sbjct: 406 MGHQIGDQLLIQTAIRLQQHVCENCTVGRLGGDEFLILSKD-ASIEKVSNIAKKILKDMA 464 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 N+ + + +T ++ + + + Sbjct: 465 NPFIINSKEFFTSPSIGISVYPKDGQTKDDIIKHADTAMYVAKENGGN-NYQFYTPEPTN 523 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLP 540 +K+ ++ N +R AL + LLY QP + + G + ++ G++ P F+P Sbjct: 524 LLSKKYIIENDLRKALKNEEFLLYYQPQVDLKSGDLVGLEALIRWQHPKLGLIPPMDFIP 583 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + +++ + + +VN+ P KN I Sbjct: 584 IAEETGYINHIGKWLIKEACRQNKQWQQNGSFYIPVAVNVSPWQFRDKNFVENIKAALDE 643 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 ++ P+ + LEITE + ++ + Q+ + G ++AIDDFGTGY++ + +L D Sbjct: 644 TNLDPKYLELEITESM-MHHFIDTIDKVHQVKEMGIKVAIDDFGTGYSSLNAIDQLPIDT 702 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F++D++TN A IV++I DL L+ +AE VE ++Q L QGY Sbjct: 703 LKIDRSFIRDMITNDSKAAIVKTIIDLGNNLHLNTIAEGVEYEEQATFLANQDCVKAQGY 762 Query: 720 LIGRPQPLA 728 L +P P Sbjct: 763 LFSKPLPPE 771 >UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAW8_ALHEH Length = 1051 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 95/558 (17%), Positives = 197/558 (35%), Gaps = 27/558 (4%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---I 249 I + + + + A + + ++++ ++ GY+ Sbjct: 478 IEREQARKAAEEQMRLAEEVFEHSTEAIIITDARQRIMRVNRAFTERTGYVPDEVLGRRP 537 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLL 306 + + + + + L L+V+ + Sbjct: 538 HMLRSPHHTQQFYRRILARLRRHGFWEGEIWNRRKGGENAPLWLTLSVVRDEAGRITHYI 597 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + ++ A DP+T LPN L +Q + L +D Sbjct: 598 AVGLDLTETKDREAHIRYLAQHDPVTGLPNRGLLADRLGQALRRAQDQHYRLALLSLDLD 657 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + ++++ + L + + ++ + L++L Sbjct: 658 RFKIINETLGHVAGDEVLQTVAQRLQDHVNGAGTVSRIGSDQFLILLPEIHKPTEAAQAA 717 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L + + + L + + + L+ L + Sbjct: 718 ERLMACVAEPLDLSGQELTPSSVVGIALYPEDGDNLETLHSHADAAMSMAKQASGHEGYR 777 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 ++ + +++ L + +R ALD+G+ L+ QP + G + +L D G Sbjct: 778 FFSSDMTSRARERLSLESRLRRALDRGEFRLHYQPQVSLADGTLTGMEALLRWHAGDEGD 837 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAG 591 ++P +F+P+ + L VL + SVNL + L + ++ Sbjct: 838 ISPARFIPIAEETGLIVPLGRWVLGEACRQNRAWRQAGLPALPVSVNLSVVQLRRSDVVA 897 Query: 592 RIIRLFKRYHISPQAVILEITEEQAF-SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + R + + + LE+TE + + + + L + G +AIDDFGTGY+N Sbjct: 898 DVRRALETSGLPGDGLHLEVTESLFLSEDDPAVVTGFQTLREMGISLAIDDFGTGYSNLG 957 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL +KID FV+ I + D I ++I +A++ L V+AE VET + +L Sbjct: 958 YLKRLPIAKLKIDQSFVRGIGDSGHDTAINQAIISIARSLGLGVIAEGVETAAELRVLQA 1017 Query: 711 LGVQYLQGYLIGRPQPLA 728 LG +QG+ RP Sbjct: 1018 LGCDEIQGFYYSRPLDAE 1035 Score = 53.1 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 72/312 (23%), Gaps = 18/312 (5%) Query: 32 SPLAIIHSSYIFLAWMPLCVMLSILFIFGW-RGVVPVLCGMFCTNLWNFHLSFLQTAVML 90 P L L +L+IFG R ++ ++ + V Sbjct: 1 MPALRKPGHGPALTICLAYAALGLLWIFGSDRLLLVLIEDTELVARLQTAKGWFYVLVTA 60 Query: 91 GSQTFVVLCACAILRWQLGTRWRYGL-TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 G V+ R + R + +W+ + G+ + +G F Sbjct: 61 GLLYLVIRFTINTTRLEEQARRPRAPDSDLLPVAGDYWVPVGILTGLAGGLAALGYLFYH 120 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI----A 205 + + I + +L+ + H + R A Sbjct: 121 QVSSTPTPPPEADIRHLARWSFTTGLLLVVAAGTGIILWWRGHVHGLEARRLRTELMAQA 180 Query: 206 PSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 +E+ TL+ + ++ L L + G + VG Sbjct: 181 DLAARERAYETLAENSPDIIVRLDRDLRHLYVNRALEAFTGIPREHYLGRTHEEVGFRGK 240 Query: 261 PF----LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLYMVRIYH 313 +L A+ + + ++ +L + Sbjct: 241 LLATWERHLNQALESGEPGTMTFSHPDREGRVRHFEALIVPETDDTGNIAHVLCISHDVT 300 Query: 314 RSEWLNRRWHLQ 325 Sbjct: 301 GHVQAREEISRL 312 >UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ56_DESAC Length = 928 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 101/473 (21%), Positives = 188/473 (39%), Gaps = 20/473 (4%) Query: 275 LNYNQNFLQGVETEYSLAFILA---VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + ++ L L+ + + + + A D L Sbjct: 449 WLEELEIRSKDGGIHWERISISLVYDLKGQCSHLIVIGEDITEEKKNAQHFEFLATHDSL 508 Query: 332 TLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T L N L +Q K+ L +D + ++ G ++ I L Sbjct: 509 TGLANRLLLHDRLDQAILKAKRVHGTVFLILLDVDRFKMINDSMGHDNGDRLLQLIADRL 568 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 L +++E++ + +L G E +++LS ET + S + + + A Sbjct: 569 LKVVRESDTVVRLGGDEFVVLLSEVETLDDALCAAEAIHRELSEPFTVSERQIPLTVSAG 628 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + + LL ++ E + G + + L +R A+ Sbjct: 629 ICSYPDHGMSSLELLRHADVAMYKAKET--HSQTCIFESSMDGLVLESLELEAELRQAIV 686 Query: 501 QGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + +L +Y QP + + G++ +L + D G+++P F+PL Q L L V+E Sbjct: 687 KNELHVYYQPKVDAGSEKIVGFEALLRWVHSDRGMISPGVFIPLAEQTGLIHEIGLWVIE 746 Query: 558 SLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + L +VNL ++A ++ + YHI E+TE Sbjct: 747 DVCRQLRQWADQDYAIVPVAVNLSAKQFQSVDLAKQVATILDSYHIDSSWFEFELTESMI 806 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N SS+ +++L G R+A+DDFGTGY++ L+RL D +KID F+ D+ + Sbjct: 807 MQNPLSSIRIMKELKDLGLRLAVDDFGTGYSSLNYLRRLPLDYLKIDRSFIDDVTQDLSA 866 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + SI +A++ + +AE VET +Q L ++QG+ RP P+ D Sbjct: 867 DAVATSIIGIARSLGMQTIAEGVETAEQLMFLKDNNCDFIQGFYFYRPMPVDD 919 >UniRef50_Q07ZQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=21 Tax=Shewanella RepID=Q07ZQ2_SHEFN Length = 1451 Score = 633 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 102/543 (18%), Positives = 197/543 (36%), Gaps = 20/543 (3%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + + + + + +L + +A F Sbjct: 888 QAEEQLRLFARAIENISEGMFILNEKYQFVEVNNACCELAASTKEKFANEILHFSRYPAS 947 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEW 317 + + + +G ++ + + + + + + + R + Sbjct: 948 YSEQIRNLLKQQGRWSGEIEASKGKDSYFLMELTIDAIYNEQGETSHYVGVFSDITRRKQ 1007 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRV 373 D LT LPN +L+ + + L +DN + ++ G + Sbjct: 1008 QEEELRKLTNNDLLTGLPNRSSLQVTLSNLVKKDVHHTLMVLDLDNFKRINDSLGHQIGD 1067 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNN 430 + + + + ++ LY+L G E L++ G + + NN Sbjct: 1068 DLLIGVAERIKLAIPKHASLYRLGGDEFALLVDQHPDIGSCAAIATQVINCLKPAFTLNN 1127 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 L +G + +++ Q LL + + + E ++ +Q+ Sbjct: 1128 DSLVLGISIGIVLYPEDEQNEQALLRKADIAMYHAKSGGGNR-YQFYSESLNQNALRQLE 1186 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + + IR AL +Y QP + G + ++ G++ P++F+PL + L Sbjct: 1187 IESLIREALKDDLFEVYYQPKIDVKKDRLNGMEALVRLNHPKLGLIGPNEFIPLAEENGL 1246 Query: 548 SARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VL R +VNL ++ RI + + + + Sbjct: 1247 IVEIGDVVLRKACFAAQKWLELGLFSGRVAVNLSSRQFALPDLQQRIESILRLTKLPAKH 1306 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE + E ++ ++QL K G +A+DDFGTGY++ LKR + +KID F Sbjct: 1307 LELEITEGTVIKDPEQAIKVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPINCLKIDKTF 1366 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V DI + D +V SI +A L+VV E VE Q +L L + +QGY+ +P Sbjct: 1367 VDDIDKSDRDLKMVDSIITIAHNMGLTVVGEGVEQTAQLNILKALNCEEIQGYIYSKPIR 1426 Query: 727 LAD 729 AD Sbjct: 1427 EAD 1429 Score = 46.5 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 9/173 (5%), Positives = 34/173 (19%), Gaps = 11/173 (6%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK-----EKRA 214 + L + L L ++I+ Q + ++ Sbjct: 724 LVTPPWWLSLEAKLVYGLFILSLIILSFKVIIRRREIQKQIAQSEERLKLSLWGSGDEMW 783 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + + + D I L ++ + A++ Sbjct: 784 DWDIESGKIYRSNIWGSLDFPQDGRRSGNPDEESNIHPLDRDRVTRALNDHFNAIT--DH 841 Query: 275 LNYNQNFLQGVETEYSLAFIL----AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + + ++ + + + Sbjct: 842 FEIAYRVKARNQQWVWILDRAKIVERDQKDVPLRMTGTIKDINNIKQAEEQLR 894 >UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1H8_9RHOB Length = 944 Score = 633 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 101/568 (17%), Positives = 203/568 (35%), Gaps = 34/568 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + H + R A + + + + +F Sbjct: 365 LREHVHEKNSILRSQEAQLREQNVLFDAALNNMSHGLCM--YDANGRLIVSNQRYAELFQ 422 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNY--------NQNFLQGVETEYSLAFILAVLIS 300 + + L V + + + + G ++ + ++ Sbjct: 423 LEPGKVKPGMTAAQLATLQKVEAVETGDSALYESRLPDHRYASGSQSTEMVKISSGRIVL 482 Query: 301 FS------VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------Q 346 + + + + R A D LT LPN + + Sbjct: 483 TTRQPLAEGGWVAISEDITERQEARDRLAFLARHDLLTQLPNRIEFRDQLDMLLNQQMVK 542 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + CL +D + ++ G + +R + L L+ + + +L G E ++ Sbjct: 543 GGEFAILCLDLDEFKTVNDSLGHPIGDELLRQVAERLRKLIGRKDVVVRLGGDEFAILTG 602 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 P ++ + + S+ + + +G + L Q Sbjct: 603 LPSRLKDVEELAQSVIWEISQPFQITDHEIVIGVSIGITIARADGTAGDELFKQADLALY 662 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 ++ E + + L+ +RTA+ G+L LY QP + G++ Sbjct: 663 RAKEDGRN-TYRFFETDMGTAVNDRRELITDLRTAVANGELELYFQPQYTLADDRISGFE 721 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ G+++P F+PL L ++ VL + A P R +VNL Sbjct: 722 ALVRWNHPKRGMVSPADFIPLAEDTGLISQLGEWVLMEACRIAAKWPD---HLRVAVNLS 778 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P L +I + + + LE+TE +++E + ++ Q G ++++D Sbjct: 779 PRQLRGHAFGPVLIDALVQTGLKADRLELEVTESVLLTDSEDVLDSLHQAKSLGVKVSMD 838 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L+R D IKID FV+ + + IV+++ +LA +++ AE VE Sbjct: 839 DFGTGYSSLSYLRRFPFDKIKIDQSFVRSMAYSDDSISIVKAVIELANNLNMTTTAEGVE 898 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T+Q +L ++G QGY +GRP P+ Sbjct: 899 TRQLLDMLTEIGCTEAQGYYLGRPMPVD 926 >UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8B4_NITMU Length = 1109 Score = 633 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 96/568 (16%), Positives = 194/568 (34%), Gaps = 22/568 (3%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 F + R I + L + + + +F Sbjct: 527 FVAMIRDITEQERRKTEILAARRQLQATLDAIPDLLFELDADGCVHAWHSVRRTEFPTVS 586 Query: 243 LVPVF----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL-QGVETEYSLAFILAV 297 + G + L + + + L+ Sbjct: 587 GESLVGKKVADFLPTGAVDIILSALAEAQEKGLSSGKQLELRLPGREDKWWFELSVSRKH 646 Query: 298 LISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEA 348 + S + + + R + +R A D LT LPN L Q Sbjct: 647 VDSAAGLRFIVLARDITERKASEQRILHLAHYDSLTGLPNRALLADRMRVAINRAARQAK 706 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G + H ++ + + ++ + + ++ G E +++L+ Sbjct: 707 RLAVLFVDLDRFKAINDSLGHDVGDHLLKVVAERMQTSIRSVDTVSRVGGDEFVVLLNEI 766 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 ET + + S+ L + + N + LL + Sbjct: 767 ETAEDAARVAQKIIDGLSQPYQIEKHELLLTGSIGICIYPDNGKEPNILLRNADASMYTA 826 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEI 522 H E ++ + +++ L + +R A+++G++ L QP G + + Sbjct: 827 KEAGHNR-YQFYSEDMTARAIERLSLEHDLRGAVERGEMFLVYQPQIELGTSRVIGVEVL 885 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMP 581 + G+++P +F+P+ L L + SVN+ Sbjct: 886 MRWRHPARGLISPVRFIPVAEDTGLILSIGEWGLRESCRQAQLWYERGLLNACISVNVSA 945 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + Q + G I + ++P + LE+TE AE ++ + +L G ++AIDD Sbjct: 946 VQFRQTDFVGIIENALQESGLAPTNLELELTESAVMQGAEPALNKLRELDALGVKVAIDD 1005 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L++ D +KID FV+D+ N I +I + ++AE VET Sbjct: 1006 FGTGYSSLAYLRQFTVDRLKIDQSFVRDVPGNNDAEAIAAAIVAMGLNLGFRIIAEGVET 1065 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + Q L + + QGYL P + Sbjct: 1066 EAQAEFLQSVLCKEGQGYLFAWPMTAIE 1093 >UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJT7_CYAP7 Length = 812 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 112/588 (19%), Positives = 227/588 (38%), Gaps = 26/588 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++F +LS A F +TR I A++ + + + + +A Sbjct: 213 SLFWASIVLSPVFAQNRQLKGFAKITRDISERKQAEVQKNKLLKDLTDLKLALDQSAIVA 272 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + ++ + I+GY + F L +S + Sbjct: 273 VTNSQGIITAVNDQFCQISGYSKEELIGKTHRIINSGYHSKKFFQQLWATISQGKIWRGE 332 Query: 279 QNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 Y +A + ++ + + + + +R + L D LT LP Sbjct: 333 ICNRSKTGQFYWVATTIVPFLNQNNQPFQYFAIRFDITQRKLAEKRLRHEVLHDSLTGLP 392 Query: 336 NFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N L Q EQ + + +D + ++ + G + + +I L Sbjct: 393 NRTLLIQRLEQVRHRAKRKANYCFALLFIDLDRFKNINDNLGHPIGDRVLITIASRLQEC 452 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGR 443 ++ + + +L G E +++L E E + ++ + + + L + Sbjct: 453 VRSLDTVARLGGDEFIILLDELEEEKEIFKIIERIEKQLTTPMVIEGQTLSLTASIGIA- 511 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F+ + LL + + + Q L N ++ A+++ + Sbjct: 512 FNDTNLSNSDLLRNADLAMYRVKNEGKA-GYAIYQSEMYAQAQALWELENHLKLAIERQE 570 Query: 504 LLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LLY QPI + + G++ ++ G+++P F+P+ + +L VL+ Sbjct: 571 FLLYYQPILSLKTLTVIGFEALIRWQHPQRGLISPVHFIPVAEETDLIVAIGEWVLQQSC 630 Query: 561 KWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + L+ +VNL L + N ++ + ++ + + LEITE Sbjct: 631 QQLSAWREKYPQANHLTINVNLSNRQLEKDNFVYKLDNVLQQTGLPATQLKLEITETLLM 690 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 +N +++ + QL + I+IDDFGTGY++ L RL +KID FV ++ ++ + Sbjct: 691 TNLAAAIATLSQLKQRNINISIDDFGTGYSSLNYLCRLPVSSLKIDRSFVANVHEDSKNL 750 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I+++I L + + V+AE +ETQ+ L +LG QY QGYL +P Sbjct: 751 QIIQTILSLGEQLMIEVIAEGIETQKHLEQLQELGCQYGQGYLFSKPV 798 Score = 61.9 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 28/243 (11%), Positives = 62/243 (25%), Gaps = 16/243 (6%) Query: 91 GSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF----WLGLVTPIGI--KCSMYLVG 144 ++ A+ L ++ W G + P + S YL Sbjct: 12 PYSLAIICPLLALGVRYLLNWALGNNAPLLIFIIPVIITAWYGGLLPGILSTVISAYLGN 71 Query: 145 SFFDFP---LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 FF P KI + I + + + L Y L ++++ S ++ +R Sbjct: 72 YFFIHPTEQFKILSLPETVRIIIFLSEGIFLSIFFEYYKRLNTKTSQIVESLRESEERYR 131 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + L Y++ I G +FF Sbjct: 132 LLVEGIEDYGIFMLDGQGRIISWNLGAERIQGYQSTEIIGRHYSIFFTTTDTSAKVPEKI 191 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWL 318 + + + + +L+ + + + L + R + Sbjct: 192 LQTALKQGR----FKGEGWRRRKDGSLFWASIVLSPVFAQNRQLKGFAKITRDISERKQA 247 Query: 319 NRR 321 + Sbjct: 248 EVQ 250 >UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax=Gammaproteobacteria RepID=Q47Z22_COLP3 Length = 1206 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 102/501 (20%), Positives = 197/501 (39%), Gaps = 21/501 (4%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCL 305 + + ++ A+ + + Y++ ++ + + Sbjct: 691 PRILQSGRQTPEFYADMWQALQNEGYWSGEVWNRRKNGEVYAVMQTISAVRDVHGIATHY 750 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + + + A D LT LPN L + + L + Sbjct: 751 VSLGNDITLMKEHQNQLEHIAHFDILTNLPNRVLLADRLSQAMLQCSRHKQSLAVVFLDL 810 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ +G + + ++ + ++EN+ L ++ G E + VL+ T + + Sbjct: 811 DGFKHVNDTHGHDIGDELLIALSVRMKEALRENDSLARIGGDEFVAVLADLTTVEDCEPV 870 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + L S + ++N L++ + + L+ + Sbjct: 871 LERLLLAASEPVIFDNIVLNISASIGVTLYPQDNVGADLLMRHADQAMYVAKESGKNR-Y 929 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + Q L IR+ALD +L+ QP N G + ++ G Sbjct: 930 HLFDTAQDDAVKVQRESLEAIRSALDNHQFVLHYQPKVNMRKGIVTGVEALIRWQHPKRG 989 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS--VNLMPLTLLQKNI 589 ++ P +FLP+I +S V+++ L ++ S VN+ L L Q + Sbjct: 990 LLNPIEFLPVIENNPMSIEMGEWVIDTALTQISQWQKLGLNFPVSISVNIAALQLQQPDF 1049 Query: 590 AGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 R++ L + + P + LE+ E A + + + G A+DDFGTGY++ Sbjct: 1050 TDRLMILLAAHPDVEPHYLELEVLETSALEDVYNVSTIMNACMALGVNFALDDFGTGYSS 1109 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+RL A++IKID FV+D++ ++ D IV + LAK+ V+AE VET + L Sbjct: 1110 LTYLRRLPANLIKIDQSFVRDMLHDSDDLAIVEGVIALAKSFKRDVIAEGVETIEHGTAL 1169 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +LG + QGY I RP P ++ Sbjct: 1170 LQLGCELAQGYGIARPMPASE 1190 >UniRef50_Q2SDR7 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDR7_HAHCH Length = 636 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 84/482 (17%), Positives = 175/482 (36%), Gaps = 16/482 (3%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 L + + + ++ + + Sbjct: 140 DELTRLWEFNKRFNQRSSYCLLEMKDGRFIDCYTNPRIHEGKVLGRVWSLSDITELKLSE 199 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMM 371 ++ + D LT LPN + + L +D + ++ GL Sbjct: 200 QQALFHSYHDNLTGLPNRTLFHERLTHAIERRGVQQRDLAVMFLDLDGFKDINDSTGLET 259 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 ++ + + + + + G E +++L +T + L R Sbjct: 260 GDQLLQMAAQRIKETLPPETTVARYGGDEFIVLLENIKTSFEATLVSERLRSAIDRPFTV 319 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 ++ + + + L+ + + + + T+ + Sbjct: 320 DDQTFHLTCSIGIALYPTDSRDADALIRKADMAMNHAKSRGRNNC-QFFADEFEILTSHR 378 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + + N +++AL++ + L QP G + ++ + G +++P +F+P + Sbjct: 379 LRIRNNLKSALEKNEFNLLYQPKIALHSNMIIGVEALIRWRRPSGEVVSPAEFIPAAEEN 438 Query: 546 NLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L V E K L + ++N+ P +I I + +RY + P Sbjct: 439 GLIIDIGNWVTEEACKQLQRWGRENHHNFSVAINISPFHFQHADILSTITQALRRYSVRP 498 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + +E+TE + E ++ + +L K G ++DDFG GY++ LKRL D +KID Sbjct: 499 ELLEIELTESALMEDIEHTIEILAELRKLGISCSVDDFGAGYSSLNYLKRLPVDTLKIDK 558 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +F+ DI + D +V ++ +LA + VVAE VET++ LL + QGY RP Sbjct: 559 MFIDDITKSQRDLALVDTMINLAHHLDMLVVAEGVETEETVHLLKEKRCDLAQGYYFSRP 618 Query: 725 QP 726 Sbjct: 619 VS 620 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 122/572 (21%), Positives = 199/572 (34%), Gaps = 40/572 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 +++ L +R L +E+ +L+ + S++ Y+ D YL P Sbjct: 236 VLALVRDTRLLKRTDTALLRREREFRSLAENSPDSIM------RYDRDCRIVYLNPSLEN 289 Query: 250 IFTLGVGK-LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL------------- 295 + L + + +L Sbjct: 290 TLLFSASDMIGRTPTELHPGDERFETYESKLRAVVATGKADEIELLLQGTHKGPRLLHIR 349 Query: 296 ----AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 +L + R + RR A DPLT LPN L Q Sbjct: 350 LVAEHDPDGECTGVLAVGRDITEVDEYRRRIQRLAFFDPLTDLPNRALLNDRIRQCLTDA 409 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G + R L ++ + + +L G E + Sbjct: 410 AARGSQFGLMLLDLDRFKEVNDTLGHSAGDRLLCEAARRLNACVRGYDTVARLGGDEFSI 469 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L G L+ + + L + Q L Q Sbjct: 470 LLPVVRDRGDLRAIAGRILEAFGEAFIIEGKELFVSVSIGIVLHMEGQCDADRLFKQADL 529 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 + E ++ Q + + + +R AL G+L LY QP Sbjct: 530 AMYHAKRQGRN-NFQFYAEELAVQVSDRTAMEGALRKALGNGELELYYQPQVALPAGRIV 588 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFS 576 G + +L GIMTPD+F+P+ + L VL + + + + Sbjct: 589 GAEALLRWRHPQEGIMTPDRFIPIAEETGLIRDLGHWVLTTACRRAVYWHRTVDSPFKVA 648 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL ++ ++ G + R+ + P+ + LEITE N +E+LH GF Sbjct: 649 VNLSTRQFVRNDLPGELQRIVQDTGCRPEWLELEITESLLLGNDAEVGAALEELHDMGFA 708 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I+IDDFGTGY+ L R D IKID F++ + +V++I +A A L V+A Sbjct: 709 ISIDDFGTGYSALSYLNRFPLDQIKIDRSFIQGFPADREKVELVKAIISIAGALQLEVIA 768 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET Q LH G + QG+L GRP P Sbjct: 769 EGVETSHQAEYLHAQGCRLAQGHLFGRPLPQD 800 >UniRef50_C4WM42 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WM42_9RHIZ Length = 803 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 107/737 (14%), Positives = 240/737 (32%), Gaps = 39/737 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + ++ F + ++ A + S+ + L + L Sbjct: 68 LAISAFAGGVGVWATHFVAMLAYSGTVAIEFDFTATVLSAATAVLGFWLSLHLLKGAALK 127 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 + + + + + +S ++ A + + AI L + + +T+ Sbjct: 128 YALMAAISATLSIAAMHFTGMSAIKAAADIHYDLPPIFVGGAISVLILLAAFWF-VTNAS 186 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 W R+ + + + + + + T+ L L Sbjct: 187 GWSRILLPTVGGILAVCTLHFTAVAST-----------ELVPNPTLPAADPLGIGRLWLV 235 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + + + + + R + G + ++ + E + Sbjct: 236 VAIAAVVCSVALATISAVFIDRYMTDLKGFANATLDGLAVIRDGGIVEMNARFSELMRRS 295 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + L + + E + LA Sbjct: 296 EKSLMGIEPDTLLLA-------ADGLPVCARRAEAIEAAPRFPNDERIFELAVHAIEYQG 348 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------AGKSFCC 354 +L + R R+ A D LT LPN E+ + Sbjct: 349 RPCEVLAV-RDLTEKRAAQRQIEHMARHDALTDLPNRMFFEERLANAVARPSREPFAVLA 407 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ +G ++++ L + + ++ G E +++ G Sbjct: 408 LDLDRFKAVNDIFGHAEGDRVLKTVSSILKRCVNGIDTAARIGGDEFIILQVGVPQPRGA 467 Query: 415 QHMVNILNSRQIHWNNTGL----DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + +G + + + + + ++ Sbjct: 468 RKLSEKILEA-FRLELNTVLDPTAVGVSIGVALYPNDGKDAEAIRHAADIALYRAKTEGR 526 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 L + + ++ L +R A+ +G + + QP+ + GY+ ++ Sbjct: 527 GL-FAFYSPEMDQEIRERRQLEADLRHAMVRGQIGIAYQPLFATSDGRCTGYEALVRWNH 585 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 + G + PD F+P+ + VL + A +VNL P+ Sbjct: 586 PERGQIPPDVFIPIAEETGTIVALGEWVLREACRTAAEWES---HLSIAVNLSPVQFRLV 642 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + + + P + LE+TE + +++ + ++ K G RI +DDFGTGY+ Sbjct: 643 SLPDTVRSVIAETGLDPTRLELEVTESALMKDRLTTLELLRRMKKSGVRIVMDDFGTGYS 702 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+ D IKID F+ + T+ IVR+I L ++ L VVAE +ET Q + Sbjct: 703 SLSNLQSFPFDKIKIDRSFITSMETDVSARAIVRAIVGLGRSLDLPVVAEGIETFDQHRM 762 Query: 708 LHKLGVQYLQGYLIGRP 724 + + G + +QG+L GRP Sbjct: 763 VIEEGCEQVQGFLFGRP 779 >UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GHW2_ANOFW Length = 765 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 127/729 (17%), Positives = 257/729 (35%), Gaps = 31/729 (4%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 +S F S I+ + I L + V + + W + + + F Sbjct: 27 VSSFFSLGGILF-AIILLWKASIRVKTNERTFWKWMTASTICYFIAEMIYRIYEWMFQTE 85 Query: 87 AVM-----LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY 141 + + A+L + R + + + ++ I Sbjct: 86 LFFPNLADVFYLLYSFAYIIALLYVIMQQRKVVVVWQSLLDATIVMCVILAYSWIYIVGP 145 Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 ++ + + LL LF A + + + + + + + + Sbjct: 146 MIRLEESILYISVLVAYPLLDLVMLFLLLHLFFATNVRRIWLWNMVGVGLFVFTDTVYFI 205 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF-------TLG 254 + + L L+ L + L + P I L Sbjct: 206 QMMQFHYESNSWLDPLWILSLLMIGLSGYYAKDGHLTFQKSEQPSVIKIMFPYVCFLLLL 265 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 YP + + ++ L L L + Sbjct: 266 FVPFIYPDDRIVITCLVFAVGCIFLRQWMMLKENRQLLQQLQTLNDNLERKVAQRT--SE 323 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRH 366 LN + A D LT L N RA +A +Q+ + + +D + ++ + Sbjct: 324 LVHLNEQLTYVANHDFLTGLFNRRAFVMKLEEELIRAKQQQHHFAVIFIDVDRFKQINDY 383 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--- 423 +G + I I R L ++ + + + G E ++ + + L+ V+ L S Sbjct: 384 FGHQIGDELIVQIGRLLKETIRPTDFIARQGGDEFTIIFTPFKHVDELRRFVHRLVSFSQ 443 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + + + + + + ET++ L+ ++ + Sbjct: 444 QPVAVQHLDIRISLSVGVAVYPYDGETVETLMKHADIAMYRAKEQGKNQ-YQFFNGEMDR 502 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 ++ ++ + A+D L+ QP + E G + ++ + + G ++P F+P Sbjct: 503 VVLQKTMIETALHEAIDNKQFTLFYQPQFDVQTGELMGVEALIRWVHPELGTISPAMFIP 562 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + V+E + + T + R SVN+ P L++N I + ++ Sbjct: 563 IAEETGQIIAIGKWVIEEACRQIQTWNEQHGRSLRMSVNISPKQFLKENFVEHIRAVLQQ 622 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P + LEITE A N + ++ ++QL + G I+IDDFGTGY++ L++ + Sbjct: 623 TQLPPDQLDLEITEGVAVFNEQYTIQKLQQLKQLGVHISIDDFGTGYSSLSYLRKFPINR 682 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KI F+ I D +V++I LAK L V+AE VET QQ +L L +QGY Sbjct: 683 LKIAKPFIDGITEEKEDVAVVKAIIVLAKNLKLRVIAEGVETLQQLNILRSLQCDEIQGY 742 Query: 720 LIGRPQPLA 728 ++G+P P Sbjct: 743 VLGKPVPAD 751 >UniRef50_A5UVR9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Roseiflexus RepID=A5UVR9_ROSS1 Length = 921 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 96/576 (16%), Positives = 198/576 (34%), Gaps = 24/576 (4%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 + + R + ++ + + +S + + Sbjct: 338 LSGSVAIVRDVTEAKRAEEALRASEERYALAAQGANDGLWDWDLVSGKIYFAPRWKAMLG 397 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + D I F + ++ + L + L + Sbjct: 398 YDDTD-IGTSPDEWFRRLHPDDRERVEWRL--LAHTRRLITSFELEYRILHRDGNYRWML 454 Query: 293 FILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 + + ++ + + AL D LT LPN Sbjct: 455 CRGMAVWDEHGRATRMVGSQTDITGRKQAEEQLAYGALHDALTGLPNRTLFMDRLSLALK 514 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 ++ + L +D + ++ G + ++ R L +++ + + +L G E Sbjct: 515 RAQREKHLFAVLFLDLDRFKTINDSLGHAAGDELLIAVARRLESVLRPGDTVARLGGDEF 574 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++L + +V + + + + E + L Sbjct: 575 AVMLDRLNAPEEAEWIVERIHQALQAPLSVRGHTVYTTASIGLALGNEGYERPEELARDA 634 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---E 515 Q+ + + + + L N +R+A+++ +L ++ QPI Sbjct: 635 DTAMYQAKMQRRARHV-VFDPDMRRKAVSHFQLENDLRSAIERNELRVHYQPIVALNGRR 693 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KKG 572 ++ + G+++PD+F+PL + L VL + + Sbjct: 694 VVAFEALARWQHPQHGLISPDQFIPLSEEIGLINTIGHWVLRDVCHQVREWRRRRPRHFD 753 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VNL L Q ++ +I I P A+ +E+TE ++ E ++ + +L Sbjct: 754 MWVNVNLSAHQLAQPDLVAQIAHAIADAGIPPNAIKIELTENTFVTHREIAIAQLNELRS 813 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G + IDDFG GY++ L + D +KID VF+ + IV++I LA + + Sbjct: 814 LGVGVCIDDFGAGYSSLGYLSQFPVDTLKIDRVFIARLGMMREHYEIVKAIITLAHSLGM 873 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +VVAE VET++Q +L L +Y QG+L GR P Sbjct: 874 TVVAEGVETEEQATMLSALRCEYAQGWLFGRALPAD 909 >UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Actinomycetales RepID=A0LUZ3_ACIC1 Length = 949 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 136/739 (18%), Positives = 251/739 (33%), Gaps = 46/739 (6%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT 74 TL V+L + + FLA + + + + + P+ G + Sbjct: 187 TLHAIAAVLLGTAAIAAIARCRLEGDIPFLALFLIGAGVIVCELGDLFSLRPLALGEWSP 246 Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 ++ L+ V+ + T R L + + L V P+ Sbjct: 247 RHPSYLLAVAGRLVLGLAVL-------------SRTAERADLVQLRRREYIAVLTPVLPV 293 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 S+ + + L+ A I V + L A L + L+R + Sbjct: 294 LAVGSLLIAAAVMRVSLR------PATLILLGVLGILLLLAWLAARLDQLLLSRTLEHRV 347 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIF 251 + L R A + + ++ TP + + F+ Sbjct: 348 VERTLALRTHAKWFRSLVQNSSDIITIVDPSGVIRYQTPSATRVLGYDPNAMVGQRFVSL 407 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMV 309 R + L + ++ L+ L+ Sbjct: 408 VAPADVHRLEAILLDAVLRPRSTHTIEFAMRHAAGHWRETETVITSLVDDHDIRGLVLNT 467 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLE 361 R + L R+ QA +DPLT L N E + L +D + Sbjct: 468 RDVSERKELERQLTRQAFSDPLTGLANRALFANRVEHALSERSRQPGEVAVLFLDLDGFK 527 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG---RLQHMV 418 ++ G + H + + L ++ ++ + +L G E +++ GP+ E + V Sbjct: 528 GVNDAQGHAVGDHLLTLVADRLRRCVRPSDTVARLGGDEFAILVVGPQAEAHGVDVAERV 587 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + + + D ET+ LL ++ + Sbjct: 588 QRALAEPFLLSGREVTLAASIGIAVTDDGTETVDQLLRNADLAMYRAKSS-RKGTYVRFR 646 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 + +V +R AL + +L+L+ QP N + G + ++ G++ P Sbjct: 647 TEMHDALLARVQTETDLRHALSRRELVLHYQPTVNLRTGQVVGVEALIRWYHPTRGLIQP 706 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGR 592 F+ + + L + + A + +VN+ L + Sbjct: 707 MDFIGMAEETGLVESIGAWAIRECCRQGARWQRYAQPGGVFHVAVNVSGRQL-HPRLPDI 765 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + P A+++E+TE +E ++ + QL FG R+AIDDFGTGY++ L Sbjct: 766 VRTALTETGMPPGALVIEVTENILVKRSEEAIAVLRQLKSFGVRVAIDDFGTGYSSLSYL 825 Query: 653 KRLQADIIKIDGVFVKDIVT---NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 R D++KID FV+ I T +VR+I L +A L VAE +ET++Q A L Sbjct: 826 ARFPVDVLKIDKSFVEQITDRNSGTEGTELVRTILHLGRALRLGTVAEGIETREQYAALL 885 Query: 710 KLGVQYLQGYLIGRPQPLA 728 + Y QGYL RP P Sbjct: 886 AMSCDYGQGYLFSRPLPAE 904 >UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Comamonadaceae RepID=A9BNX4_DELAS Length = 916 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 120/711 (16%), Positives = 239/711 (33%), Gaps = 31/711 (4%) Query: 44 LAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAI 103 + ++ + + + V G + G + Sbjct: 181 MLYLVRPLSRAEQGGYVLMQVPAAALGAVLAQGGVLDGLEVTLEQGSGELLLS-MPQYGD 239 Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 + L S V L V + + + L +S+ Sbjct: 240 VAAVRLLPTTSQLPSSGVMHMAARLSRVPALVAAHPLPKGHLWVTASLPMSSVLASWRVA 299 Query: 164 FTVVDLLSLFTAVLIYNM---LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS-- 218 ++ L + VL+ + + Y+ R+ + AQ + L Sbjct: 300 AWLMVLAVMIFGVLLAVLGWTVHRYMDRLHAARRQAQRSEQWLDQALDSMVSGFLLLDSQ 359 Query: 219 WLAALSVLLLLLCTPYENDFI--AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 P+ D + L + + + +L Sbjct: 360 QRVLRWNRCYEEMFPWHADQLEPGRPLQSLLDSCPSAVGLAAAPAQAYEAKDLHRQLVLR 419 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 F Q + + + + ++ A DPLT LPN Sbjct: 420 PGVPFEQQLPSGRFVQMTARLAAED--GVVITYNDVTDIRLATAEIESLAFYDPLTSLPN 477 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 R L + + L +D + ++ G + ++ + L ++ Sbjct: 478 RRLLLDRLAQATVLAAREGWTGALLFLDLDQFKMLNDTLGHEVGDQLLQQVAHRLRSAVR 537 Query: 389 ENEKLYQLPGSELLLVLSGPETE-GRLQHMVNIL-------NSRQIHWNNTGLDMGYGAA 440 ++ + +L G E +++L E + + ++ Sbjct: 538 SSDTVARLGGDEFVVMLCELSHEPAEAATLAQRIGEKILARLNQSYVLGAHLHRSACSIG 597 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F ++ LL Q Q A + L + + + ++V + +R AL Sbjct: 598 ATLFGRQPQSAAELLKQADIAMYQIKARN-GSGLCFFDPQMQVEIHQRVRMEGDLRQALA 656 Query: 501 QGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 Q L+ QP E G + +L + G++ P F+ + + + + V+ + Sbjct: 657 QSQFELHYQPQFTLAGEVIGAEALLRWRHPERGLVPPGMFIAVAEESEIIVPLGMWVIRT 716 Query: 559 LLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + LA + + +VN+ +N A ++I + I+P + LE+TE Sbjct: 717 ACEQLAIWQKDARLRHLQVAVNVSARQFRHQNFASQVIEQVRNAGIAPHLLKLELTESLV 776 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N + S+ ++QL G ++DDFGTG+++ L +L + +KID FV+ + D Sbjct: 777 IENVQESIDKMKQLRSHGVCFSMDDFGTGHSSLTYLTQLPLNQLKIDQSFVRHLGLRHTD 836 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +IV++I +A+ +L V+AE VET +Q+ALL G +Y QGYL P P+ Sbjct: 837 DVIVQTIIGMARNLNLDVIAEGVETLEQRALLAHYGCEYFQGYLFSPPVPI 887 >UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0VL09_ALCBS Length = 959 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 111/590 (18%), Positives = 210/590 (35%), Gaps = 50/590 (8%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 ++ RMI + + L T+ A + +L Sbjct: 369 GRVVSRSESGRAIRMIGTRRDITEDRQAQEQQRLAA-----TVFENAPEGIFILDHKFRF 423 Query: 230 LCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L + I GY + I+ G R +L +T A+ N + Sbjct: 424 LAVNTRFEQITGYTESLLIGRRILEEEGAQANREIYLEITAALLDNGFWEGEINERRRNG 483 Query: 287 TEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y ++ + + + M+ + ++ + D LT L N + Sbjct: 484 EIYPEWLQMSAVRDEQKRVIRYVGMMSDLTARKETEQQLQFLSNYDRLTGLANRTQFREH 543 Query: 344 PE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + +D + ++ G + +++ + E L + Sbjct: 544 LHKSLTLARLNRQKVALLMIDLDRFKPINESLGHEIGDRLLKAAAERMAQHAGGQESLAR 603 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 + G E L+L +EG + L + + L +G F + Q Sbjct: 604 VGGDEFTLLLENHGSEGSISQQCQQLINAMKKPFLIDGHELLLGASIGISIFPDTAKEAQ 663 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 ++ Q Q+ + + +Q+ L ++R A+ + + +++ QP Sbjct: 664 SMINQSDMAVYQAKRSGGN-NFQFYRSNMRVASVEQLALETSLRKAIFKNEFVVHYQPKM 722 Query: 513 NK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N + ++ G++ P F+PL + L + VLE + Sbjct: 723 NLASNRITSVEALVRWQHPTMGLLPPADFIPLAEETGLISAIGELVLERSCRQAHKWQKQ 782 Query: 570 KK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA---------VILEITEEQAFSN 619 SVNL + N+A I R+ +SP + + Sbjct: 783 GLGEICVSVNLSAHQFRKGNVAETIDRVLSTTELSPHLLELELTESLI---------MED 833 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 E ++ ++QL G +A+DDFGTGY++ LKR D +KID F+ ++ N DA I Sbjct: 834 MEQNIELLQQLRSRGVELALDDFGTGYSSLSYLKRFPVDTLKIDRSFIMELDKNPDDAAI 893 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 R+I D+A + ++V+AE VET ++L + +QGYLI RP P ++ Sbjct: 894 TRAIIDMAHSLKMNVIAEGVETADHLSILRDMHCDSIQGYLISRPVPESE 943 Score = 52.3 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 25/318 (7%), Positives = 71/318 (22%), Gaps = 18/318 (5%) Query: 23 VLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLS 82 + ++ ++ + + + PL + S + ++ + G+ T L + Sbjct: 90 LFRRMLSALALASPLLIGLAGYLFNPLDSLFSPPMLGAQLVLICLGLGLSTTALVAYSSH 149 Query: 83 FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYL 142 F + L + + + ++ ++ + + + Sbjct: 150 FPTVFLYLIMLLGPAVARLSETQQHSQLALVLLMSLLGLFFLVAARRINHTGHKAMMLQA 209 Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 L + +A ++ A L M+ A Sbjct: 210 NNRSLIDYLNRARSDAEALNEKLAQEIYDRKDARQRLQDTNDRLESMVQERTRA---LGE 266 Query: 203 DIAPSLGKEKRAFTLSWLAALSV----LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 +R + + + L L D + GY F F + Sbjct: 267 TNTALAATSERLELALEASNIGLWDWMLDTGLNHHTNFDRLLGYDSAYFKNFFGDLDTLV 326 Query: 259 RYPFLNLTWAVSTL------CLLNYNQNFLQGVETEYSLA----FILAVLISFSVCLLYM 308 L + + + + ++ ++ Sbjct: 327 HPDDLARIRQAMVSHFKGEDPRYHAVYRLRHADGSWRWIEDEGRVVSRSESGRAIRMIGT 386 Query: 309 VRIYHRSEWLNRRWHLQA 326 R + A Sbjct: 387 RRDITEDRQAQEQ-QRLA 403 >UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=45 Tax=Rhizobiales RepID=C6AVD3_RHILS Length = 717 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 100/568 (17%), Positives = 197/568 (34%), Gaps = 34/568 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 I++ + ++ + V + + + + Sbjct: 139 ILAIVQDRSEVNAARRQMSDTRSLLDSIVDNLPVGVFVKDMEADGLYVLFNEACGDIVGM 198 Query: 250 IFTLGVGKLRYPF----------LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 VG+ A +++ + + L + L Sbjct: 199 RAEHVVGRTDRSLFPPSQTDAFREQDRRAFEANAAISFEETMQRADGVPRILRTVKRALP 258 Query: 300 SFSVC----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE-------A 348 + LL + + + + A DPLT LPN A + Q + Sbjct: 259 TPEGHAPRYLLGISQDVTEERAVEAKLAHLATRDPLTGLPNRAAFSEHINQRAVEATADS 318 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D+ + ++ G + + LL L E + + +L G E +VL Sbjct: 319 AIALLYIDVDHFKHINDSKGHAAGDALLCQVSERLLQLAGEGDLVARLGGDEFAVVLE-L 377 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + R L S + + + L+ + Sbjct: 378 DEPERAGRFAQRLLQTLSHAFDLDGAREHVTCSVGIALAPDHAGDADVLMRHADLALYAA 437 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR----NKEGEGYDE 521 E + ++ ++ + AL++ L+ QPI + G++ Sbjct: 438 KESGR-SIYRFYETEMRLAAQRRHVMTAELWEALEKRQFELHYQPIVQLDNDG-IGGFEA 495 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 ++ + G++ P +F+PL + L V+ + P R +VNL Sbjct: 496 LIRWRHPERGLVAPMEFIPLAEETGLIVPIGDWVIREACRAAGGWP---VHLRIAVNLSV 552 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 ++ ++ ++ + +EITE ++A+ S+ + L G RIAIDD Sbjct: 553 SQFRHASLLSTVVAALDETGLTADRLEIEITESVFLTDADQSLPRLRALKALGVRIAIDD 612 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+ D IK+D FV I T+ + IVR++ + + + +AE +ET Sbjct: 613 FGTGYSSLSYLRSFPFDKIKLDRSFVSGIETDAGNLAIVRAVVGIGSGFNATTLAEGIET 672 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q L G +QGYL+GRP P + Sbjct: 673 EEQLQKLRAEGFSEVQGYLLGRPMPQHE 700 >UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Enterobacteriaceae RepID=C8QI00_9ENTR Length = 949 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 114/599 (19%), Positives = 224/599 (37%), Gaps = 36/599 (6%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK------EKRAF 215 + F ++ + F +TR + + R + + + Sbjct: 348 SAFWAHVVIDAIHNEEGRLIGFAKITRDVTERREHEQQLLRARDLAEAQSAKASELSKFL 407 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---------FLNLT 266 S +++ E + +F I L + K + F +L Sbjct: 408 DTIITHIPSCVIVEDAITREILMVNDKAEQLFGINKLLIMHKRPHECMSAELSDYFNSLA 467 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWH 323 ++ + L E L + + ++ +V + R H Sbjct: 468 DIALRSEGIHTREQLLLTAGGERILHTRATTIAGKDLRQNFVMLIVEDVTDQREADARIH 527 Query: 324 LQALTDPLTLLPNFRALE----QAPEQEAGK----SFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT LPN +A + + CL +DN + ++ G + Sbjct: 528 HMAHHDNLTSLPNRILFRQKLSEALRADTQGGYITATLCLDLDNFKNVNDALGHQIGDDL 587 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTG 432 +R++ + L ++++++ L ++ G E +VL + L ++ Sbjct: 588 LRTVAKRLRNVLRDHDTLARIGGDEFAIVLPNIRNADEAAVVAQRLIEAIRPPVNLEGHN 647 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L +G T + +L ++ + + + + ++ Sbjct: 648 LSVGLSVGIALSSQAANTPEHMLRCADMALYEAKRNGRNR-YEHFTLEMDDLARSRRVIE 706 Query: 493 NTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R A+ L LY QPI + GY+ ++ G++ P+ F+P+ + L Sbjct: 707 NDLRDAISGRQLKLYYQPITDGNEKGIIGYEALMRWHHPIKGLIMPNDFIPIAEETGLIH 766 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 L + A+ ++ SVNL PL ++ + + ++P + + Sbjct: 767 LLGAYALYEACREAASWEGEQ---SVSVNLSPLQFKNSSLISVVEGALRESGLAPHRLEV 823 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE +A ++ ++ L G +IA+DDFGTGY++ L+ D IKID F+ D Sbjct: 824 EITESVLLDDALGNIRTLQNLKALGVQIALDDFGTGYSSLSYLRSFPFDKIKIDKSFIND 883 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + I+R+IT ++++ + + AE VE+ +Q A L + G QGYL GRPQP Sbjct: 884 MGDSREALAIIRAITGMSRSLDIQITAEGVESSEQFARLREEGCTLFQGYLFGRPQPSE 942 >UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3D1_GEOSF Length = 934 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 108/672 (16%), Positives = 230/672 (34%), Gaps = 38/672 (5%) Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM 140 L+ + + + A A + + + WLG Sbjct: 257 YRHLRATNWILGANYPLKEAYAPVEQAKFYVALASFFGIILSILVVWLG---------MR 307 Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 YL + I + G+ V L L ++ Q Sbjct: 308 YLTMPLLNMARHIRSMHGEPGKTSPVEVLSEDEIGELGLA-----FNDLLDRVGKEQEAL 362 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R + + + ++ + + ++ + I + Sbjct: 363 REAVLTAKNERAKSEAIVAALGDGMSMVDTDFKVLYQNKVHQTLAGGEFIGSYCYQAFEG 422 Query: 261 PFLNLTWAVSTL----CLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYH 313 + + L++ + ++ + L + L + + + +VR Sbjct: 423 KDAPCSGCPVAMSFADGLVHTAERVVERDGEKLYLEITASPLFDYDGRINAGIEVVRNIS 482 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 R + + A D LT LPN R + + + L +D+ + ++ Sbjct: 483 RRKQMESAIEQMAFHDALTGLPNRRLFNERLAQAIAYAQRNDQFLAVMFLDLDHFKDIND 542 Query: 366 HYGLMMRVHCIRSICRTLLPL-MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR 424 G + ++ + L + + + + G E LL LS + + H+ +L Sbjct: 543 SLGHTIGDELLKEVATRLKRCGRRAEDTIARQGGDEFLLFLSEIKDKEDAVHLAALLLQE 602 Query: 425 ---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + L + + + ++ L ++ +++ + Sbjct: 603 MTAPFILSGYELFVSVSIGISIYPHDGRDVETLASNADIAMYRAKQQGRN-SVNLYNHSM 661 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + +++ + ++R A+ + L+L+ QP + + G + ++ + G++ P F Sbjct: 662 GEKNRQRLTVETSLRRAIGKNQLVLHYQPQVSVHSGKIIGMEALVRWNHPEQGLLLPTSF 721 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P + L VLE+ + SVN L Q++ ++++ Sbjct: 722 IPQAEETGLILDLGEWVLETAAAQNKAWQDAGYPPVKISVNYSQRQLRQQDFVEKLLKSL 781 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 K+ + + + LEI E ++ + L G RIAID+FG GY+ ++L Sbjct: 782 KQTGLEARWLELEIREAVMAEGIMDNLQALAALRDVGVRIAIDNFGAGYSCLKQLGDFPL 841 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV I ++ + I ++ LAK LSV+A+ VET++Q LL LG +Q Sbjct: 842 DALKIDLSFVSQISSSEVKKAIAGTVASLAKGLHLSVIAQGVETKEQMQLLCSLGYGEMQ 901 Query: 718 GYLIGRPQPLAD 729 G P P + Sbjct: 902 GNYFSNPLPAEE 913 >UniRef50_A5IG24 Sensory box protein/GGDEF/EAL domains n=6 Tax=Legionella RepID=A5IG24_LEGPC Length = 771 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 98/571 (17%), Positives = 199/571 (34%), Gaps = 45/571 (7%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 Y R + A R + + ++ + I GY Sbjct: 196 YSFRDVTQKRMALDELRIRERAIEASTHGVVIIDVTKNENKVIY---VNRAFERITGYGE 252 Query: 245 PVFFIIFTLGVGKLRYPFL---NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 L + + + A+ ++ Y +A + Sbjct: 253 QHALGKGLLTLLGSNLEEVNHKRIELAIRESKEETIEMESIKRNGEFYWCEISVAPVKDS 312 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------K 350 + ++ + + + LQA D LT LPN L EQ Sbjct: 313 FGYVKHYICILNDVTQRRDMEDQLLLQATYDSLTNLPNRVLLMDRVEQAILQARKNKAIL 372 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 +F L +D + + G M +++I LL + ++ + + +L G E +++L+ + Sbjct: 373 AFLFLDLDRFKLTNDTLGHGMGDKLLQAIANRLLIVTEDFDTVARLGGDEFVILLTDIDN 432 Query: 411 EGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + I + L + + + + + L+ + Sbjct: 433 MLEAETIAQNILKIIEKPIQIDQHSLKITGSLGISFYPRDGDDYESLMKSADLSMYHAKD 492 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 E ++ + + L N +R AL +L L QP+ + G++ ++ Sbjct: 493 TGRN-NYRVYEPEMNRRVINHMQLDNALRDALKNDELFLVYQPLIDLKQSRVVGFEALMR 551 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 G+++P F+P+ + + ++ + +VNL Sbjct: 552 WHSKILGLVSPADFIPMAEENGMILEMGEWAMKQACIQVKEWHKAGFKNLSIAVNLSGRQ 611 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS----------NAESSMYNIEQLHKF 633 QKN+ + R+ K + + + + + + L Sbjct: 612 FRQKNLPEVVSRVLKSSGLQ----------SRFLELELTESLLIEDIDHVVDTMYALKDM 661 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++ IDDFGTGY++ LK+ D +KID F+ ++V+N DA I ++I +L + +L Sbjct: 662 GTKLVIDDFGTGYSSLSYLKQFPVDKLKIDRSFITEMVSNQNDAAIAKAIINLGHSLNLQ 721 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 V+AE VE + Q+ + G Y QGY P Sbjct: 722 VLAEGVENEFQRDFITSHGCDYAQGYFFKAP 752 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 121/655 (18%), Positives = 224/655 (34%), Gaps = 43/655 (6%) Query: 109 GTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVD 168 G + L L + + L G+ + I G D Sbjct: 43 GEQALAAFRRIQPEIVLLDLAMTQADAFELCASLHGARGGERVSILAVAGRGDLEGVRRA 102 Query: 169 LLSLFTAVLI-YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL- 226 + + T LI + R+ AQ R E+R L VL Sbjct: 103 IDAGATDFLIHPVDVEMLGLRLSCGRRSAQTRER-----LSRNEERNRGLIKGIPHLVLQ 157 Query: 227 ------LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 +L P + D I + Y + V ++ Sbjct: 158 ISKEGTVLDFEAPRDFDLRQFPDGLRGRRIQDVFFADAPYVIVRCIERVIETAESQVLEH 217 Query: 281 FLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 ++ + + ++ +R + + A DPLT L N ++ Sbjct: 218 NVRIGNDIHVYETRILPNAEGEPTVV--MRDVTERRKMEKELLQLAYHDPLTGLLNQHSM 275 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + + ID+L+ ++ +G + ++ + +L + ++ Sbjct: 276 RERIARALELPGQHGRMTAILWVDIDHLKRVNATFGHELGDVLLQRVADRMLGCARRTDR 335 Query: 393 ------------LYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGY 437 + ++ G + +++L+ ++ L S+ + + + Sbjct: 336 KARLGSDQSIKAVARMGGDDFVVLLTEISHVKGAANLAKRLLDDLSQPFVLDRHEVYVTA 395 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + LL + A + + L +R Sbjct: 396 SIGIAVHPHDGAEAGTLLKNADSAMHHAKAEGRN-NFQFYTSSGKTAALRSLTLEGDLRM 454 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL + +L + QP + E G + ++ G++ P F+PL + L Sbjct: 455 ALARRELFVEYQPEIDLKTGETVGLETLVRWDHPTLGLIPPLDFIPLAEETGLILPIGEW 514 Query: 555 VLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 +L A R +VNL Q+N+ I + + PQ + LEITE Sbjct: 515 ILSIACMQNAIWHKSGLEPIRVAVNLSGHQFRQRNLIKTIAKTLTNSRLDPQHLELEITE 574 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 NA S+++ +++L G R+A+DDFGTGY++ L+R D++KID F++D+ N Sbjct: 575 STLMENAASTIHTVKELKSMGVRLAVDDFGTGYSSLSYLRRFPLDVLKIDRSFIRDVTIN 634 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DA I R+I +A +L V+AE VE +QQ L + QGY RP A Sbjct: 635 ADDAAITRAIIAMAHNLNLEVIAEGVENEQQLQFLQENNCDMAQGYYYCRPLTPA 689 >UniRef50_A3JAM8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAM8_9ALTE Length = 756 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 105/478 (21%), Positives = 200/478 (41%), Gaps = 22/478 (4%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + + + T + + + + + + +VR + + A DPL Sbjct: 270 IQRYHELDAINKYGTVFPIEIGMTQMPPLGDIDFVVIVRDITQRKKREDEIRQLAYYDPL 329 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN R L+ Q + L +DN + ++ G + + L Sbjct: 330 TRLPNRRLLKDRLQQVIANCGRQSRYAALFFLDLDNFKNLNDSLGRTKGDLLLCQVAARL 389 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN-----IL---NSRQIHWNNTGLDM 435 + ++ + + +L G E ++++ G ++ + + +++ + + + Sbjct: 390 IESVRHGDTVSRLGGDEFVVLIEGLSSDRNEAAVQVEAAAGKINVQLTQKFDLDGSPYNG 449 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 F+ N +L+ LL Q ++ A H ++ + + + + + + Sbjct: 450 SASIGVTTFNSNDSSLEDLLKQADMALYKAKAADH-SSVHFFDPQMQVVASLRAAMQQDL 508 Query: 496 RTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL + L+ Q ++ G + +L G ++P +F+PL + L Sbjct: 509 YEALRKNQFQLHYQKQIDQHEGLIGVEALLRWAHPTKGFISPAQFIPLAEETGLIVPIGE 568 Query: 554 QVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + LA K +VN+ + +K+I ++ P + LEI Sbjct: 569 WVLREACQTLAQWASDPAKANLTIAVNISVVQFNKKDIVHTVLNALNASGAKPHNLKLEI 628 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE S+ E+ + +L + G +IDDFGTGY++ LK+L +KID FV+DI+ Sbjct: 629 TESLLASDVENVKVKMLELQRHGVTFSIDDFGTGYSSLFYLKQLPLHQLKIDQSFVRDII 688 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D I +++ LA A L+V+AE VET+ Q+A+L LG QGYL G+P L D Sbjct: 689 NSPNDQAIAQAVITLAIAMHLNVIAEGVETEAQRAMLQDLGCGAYQGYLFGKPCALQD 746 >UniRef50_A8UUX8 Preprotein translocase ATPase subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUX8_9AQUI Length = 1010 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 111/566 (19%), Positives = 217/566 (38%), Gaps = 27/566 (4%) Query: 185 YLTRMIV-SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 L R I F+ ++ T W+ + + I+GY Sbjct: 444 KLVREIADEVSFSLTYMEKEKTLHTLSLAVEQTSDWVLITDKEGNIQYANRAVEEISGYS 503 Query: 244 VPVFFIIF--TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ-GVETEYSLAFILAVLI- 299 V G+ F W + + + L + + Sbjct: 504 VRELIGDTPKIFKSGRHGKNFYKRLWEKVLAGETFRSVFINRGKDGKLFYLDQTITPIKD 563 Query: 300 --SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 V + + + L + + A DP+T LPN + + Sbjct: 564 SFGNVVGFVATGKDITHEKELKEKLNYIAYYDPVTELPNRTNFIERLKFSISRTKLLNRN 623 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D ++++ YG + ++ I + + ++E + + +L E +VL Sbjct: 624 LAVLFIDVDRFKYVNDTYGYPVGDEVLKVIAQRIKDAVREGDTIARLGSDEFGVVLVDIA 683 Query: 410 TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + +++ + S + I + + F + + L+ + + Sbjct: 684 HKEDIPKVMDKIFSNMEKPIEVEGKEVVLTLSVGIAVFPEDGTEAEDLVKKAEMALAHAK 743 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEIL 523 + E ++ T+ VL+ + AL++ + +++ QP + + G++ +L Sbjct: 744 EDVRN-SYQFFREDMNTHITELVLMERHLFRALERAEFVVHYQPYFDLKSMKAVGFEALL 802 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 D G + P KF+P++ L + +L+ + + G SVN+ P+ Sbjct: 803 RWNSDDLGFVFPSKFIPILESTGLIIKVGEWLLKEACR-----LAETTGKSVSVNVSPVQ 857 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 K+ ++ R + I + LEITE + E + ++ +L K G ++AIDDFG Sbjct: 858 FKDKDFPRKVERAIEECGIEGGYITLEITESTIMDDVEFAKKSLRRLKKLGVKVAIDDFG 917 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK L D +KID FV+DI + D IV +I LAK L VAE +E ++ Sbjct: 918 TGYSSLAYLKLLPVDFLKIDVSFVRDIDRDPDDRAIVNAIIQLAKNLGLRTVAEGIENEK 977 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 +L +G QGY + RP P + Sbjct: 978 HLEILKSMGCDIGQGYHLARPMPEEE 1003 Score = 43.1 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 7/114 (6%), Positives = 24/114 (21%), Gaps = 7/114 (6%) Query: 214 AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR-----YPFLNLTWA 268 + + + + GY F +L + + Sbjct: 17 YMVSFEDSDNPATAQVQYINSKVKDLTGYSPEEFIKDPSLWMTLVHPKDTERVMKATLKL 76 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNR 320 + + + + L + + + + R + + L Sbjct: 77 IKRKESITREYRVKTKEGSYIWVEDRLIPVLEKDRLIGFVGVARDITKRKVLED 130 >UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47U99_COLP3 Length = 1534 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 105/574 (18%), Positives = 209/574 (36%), Gaps = 21/574 (3%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 ++ + R+ S + + T W+ + + + Sbjct: 944 LGKIVAVDANNHPVRVTGSYTNITESRANEERAQYYGDAFQQTQDWVFIIDEKISRITAN 1003 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYP--FLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + + F L + + L ++ + + + EY + Sbjct: 1004 QSMRAVFDWPEEEFDFSDKLLGVSQKRRSFYRKLMLSLKEGEHWRGEELIVTANKDEYHV 1063 Query: 292 AFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 + V S L+++ + L A D LT LPN L + Sbjct: 1064 IINVTVGFSSVTNALHYLFVLTDISAQKSAESELRLLANYDHLTGLPNRTLLLERIKHAI 1123 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 ++ + + +D + ++ G +R I L ++ ++ + ++ G E Sbjct: 1124 DFSNRRDTSIAVFFIDLDRFKQVNDSLGHDFGDLLLREITNRLQSTLRIDDTVARIGGDE 1183 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +++L E +L + + + + + + +G + + LL Sbjct: 1184 FVVLLESFANENQLGRIAEKVIDTIGQSVDLDGNLVSVGASVGIALYPNDGINSDELLRH 1243 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 + ++ + +++ + ++ A+ + + + QPI N Sbjct: 1244 ADVAMYHAKQAGK-SNFKFYTAQMNVEAMERLSQESALKLAVKNNEFINHYQPIINAYTG 1302 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 + G + ++ G++ P F+PL + NL LE + K L + Sbjct: 1303 KAVGVEMLMRWQTST-GLVPPSDFIPLSEELNLIITMTEMALERVCKDLKEWHTIRPEFY 1361 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 S+NL ++ +I I L RY + + +E+TE E+++ + +L G Sbjct: 1362 VSINLSVQHFVEADIVSFISELLARYQLPAAILRVEVTESSLILQPENAITTMRKLSSLG 1421 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +A+DDFGTG+++ LK+L DIIKID FV I N D IV + LAK ++ Sbjct: 1422 LTLALDDFGTGFSSLSYLKKLPLDIIKIDRSFVAGIGINEADEAIVDTTLVLAKRLNMHC 1481 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AE VET +Q L YLQGYL +P Sbjct: 1482 IAEGVETVEQFNYLVAKQCHYLQGYLYSKPSSAE 1515 Score = 44.6 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 12/175 (6%), Positives = 40/175 (22%), Gaps = 7/175 (4%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 F + ++ +++ + + ++ Q+ +R + + Sbjct: 804 FAPWRSPLAILLYSIALMLMMVTWYRYRKTQQQLLLDVHEQVKYRENRLQLALTGSNSEV 863 Query: 217 LSWLAALSVLL---LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 W A ++ + L Y + L +I + + + + Sbjct: 864 WDWQADEDLIFGKRISLDLGYREKALFYSLEEHVALIHPEDHDNFIHCWQLFISSANLKD 923 Query: 274 LLNYNQNFLQGVETEYSL----AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + + + V + S R Sbjct: 924 NFSCTYRLKTSDGQWFWYKDLGKIVAVDANNHPVRVTGSYTNITESRANEERAQY 978 >UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WB0_RHOFD Length = 499 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 97/451 (21%), Positives = 177/451 (39%), Gaps = 16/451 (3%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAP 344 L + + ++ + + QA D LT LPN +A Sbjct: 40 VTLNAVPDGVLRIVCV-HDLSERKKFEESLRYQATHDELTGLPNRWLFHLHLSQALVRAR 98 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D ++ +G + + + ++EN+ L +L G E ++ Sbjct: 99 RTGLRVAVLFLDLDYFRSVNDSFGHTTGDALLVQVGTRIRSTLRENDTLARLGGDEFAIL 158 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ + + + L + + G + + + LL Sbjct: 159 LADMKNVDEAVRVASKLLLSLQASYRLQDQDVYSGGSLGLAFYPDDAQDSDTLLRYADMA 218 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 Q+ + + + + + L ++ A+ QG L L+ QP + G Sbjct: 219 MYQAKQAGRG-GYACYSQEMDLRGHENMRLHTRLKEAMAQGILQLHYQPQVDVESGAIVG 277 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 + +L + G ++P +F+P+ L VLE+ + +A R +VN Sbjct: 278 AEALLRWHDPELGHVSPARFIPVAEATGLILPLSDWVLETACQQIAAWTQAGTPLRVAVN 337 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + Q+N+ ++ R Q + +EITE A + + ++ L G RIA Sbjct: 338 VSAQQFRQRNLPEQVRAALARTGAQAQWLDIEITESVAMTQPAQAREQLDALVGLGCRIA 397 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LK L +KID F+ I + D I R+I LAK+ L++VAE Sbjct: 398 LDDFGTGYSSLAYLKALPVSKLKIDKSFMDGIPQDANDVAISRAIIALAKSLGLTLVAEG 457 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q A L + G + QG+L + + + Sbjct: 458 VETDAQLAFLRQYGCEVYQGWLFAKAMTVQE 488 >UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5B4_GEMAT Length = 966 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 113/709 (15%), Positives = 240/709 (33%), Gaps = 30/709 (4%) Query: 42 IFLAWMPLCVM--LSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLC 99 + W ++ +IL + G +V L + + + ++ ++ Sbjct: 239 ASILWRRTALIPRANILVLIGGALLVRFLGHVASISEMHGGEGLPDLGFVVRPAACFLMA 298 Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 A L R + + L + ++ L +F + + Sbjct: 299 AAGWLSSATVMRRDVRPSRDRDGPSVSILPY-AAVVPGFALLLRMAFEERHQPLLGLVLG 357 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 A A+ + + + + L R + + + D+ + + Sbjct: 358 AAALTAIAFVRQFAASREAVSTLAEASARDSEARFRSLVQHSSDVIMIVDPDGTLRFA-- 415 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN--LTWAVSTLCLLNY 277 S + + + + L+ + + + + +L Sbjct: 416 ----SPSMSTVFGHEPSRIVGTNLLSLLHVEDQQHAVQFLEELARSGARTGAGSPGVLKR 471 Query: 278 NQNFLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + ++ + L+ L+ R + +++ QA DPLT L Sbjct: 472 EWRLAHSDGSWMTVDNVGTNLLREPVVRGLVLNSRDVTEQSMIKQQYIHQAFHDPLTDLA 531 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N Q + + L +DN + ++ G + R L + Sbjct: 532 NRSLFLYQVGHALARGARQHSPVTVLFLDLDNFKTVNDSLGHAAGDRLLVDAARRLASCV 591 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 + ++ + +L G E +++ ++ + + + + SR + + + R Sbjct: 592 RSSDLIARLGGDEFAVLVEDAQSVEEVLVVASRIGTALSRPFMLSGKEVFVSASVGIARS 651 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 E+ L+ + + E+ + +++++ +R A+++ + Sbjct: 652 SR-GESSDELVRNADVAMYVAKTRGKGQHV-LFEQEMHDAALERLVVEADLRRAIEREEF 709 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QPI G + ++ L + G + P F+P+ L VL + Sbjct: 710 FLEFQPIVELDTGNIIGAEALVRWLCRERGTVPPGVFIPIAEVTGLIVPIGKWVLRRACR 769 Query: 562 WLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 R +VNL L I + + + + P ++LEITE N Sbjct: 770 EAQRWTRERGIAARITVNLSGRQLQDAGIVDDVRQALEETGLDPTQLVLEITESMLMQNT 829 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + SM + L + G +AIDDFGTGY++ L+R DI+KID FV I ++ Sbjct: 830 DVSMARLTALKELGVSLAIDDFGTGYSSLSYLQRYPIDILKIDKAFVDVIDKGGEGPVLA 889 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I L ++ VAE +ET+ Q+ L LG + QG+L P + Sbjct: 890 SAIVALGDTLRMNTVAEGIETEAQRGHLLTLGCELGQGFLFSPPLDEEE 938 >UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='Nostoc azollae' 0708 RepID=B9YGE9_ANAAZ Length = 637 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 96/486 (19%), Positives = 194/486 (39%), Gaps = 16/486 (3%) Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWL 318 +L++ + ++ +N L ++ + ++ +++ R + Sbjct: 133 PRHYLSILRELDENPDIHIGENILFKDGRIFNPFYQQQYKYKKNIGQVWIFRDITAEKLA 192 Query: 319 NRRWHLQALTDPLTLLPNF----RALEQAP---EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + + ++L D LT LPN L A C L +D + ++ G + Sbjct: 193 SNIINYESLHDILTNLPNRLLLKNLLIDALTKVSHNHSLGVCFLDLDRFKKINDSLGHGI 252 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW 428 ++ + + + ++ ++ + + G E +++L + + + + + Sbjct: 253 GDKLLQMVAQCIKKSLRSDDIVARWGGDEFIILLPEISEMYNIDLIQERIFAAFKQGFKI 312 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 +N L++ + + E + L+ + ++ Q T+ Sbjct: 313 DNYHLNISPSIGIALYPQHGEDGETLIKNAEAALSFVKLQGRN-NYKVYQAAINSQATEL 371 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 +L N++ AL++ + +Y QP N E + +L + G++ P F+P+ + Sbjct: 372 FILENSLYNALERQEFKVYYQPQVNSSTGEITKMEALLRWQHPELGLIPPATFIPIAEET 431 Query: 546 NLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL++ + +VN Q N+ G + ++ ++ Sbjct: 432 GLILPISEWVLKTACLQNKAWQQTLNLSSLSVAVNFSGRQFQQPNLVGIVEQVLCETKLA 491 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + + LEITE A + E + + QL + G I+IDDFGTGY++ LK +KID Sbjct: 492 HRYLELEITETVAMQDVELTQKILRQLDEMGVTISIDDFGTGYSSLSYLKDFSIHALKID 551 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV+D+ I +I LA +LSVVAE VETQ+Q L L + +QGY Sbjct: 552 QSFVQDLANKDHQTAITTAIISLAHGLNLSVVAEGVETQEQLNALRILQCEIMQGYFFSH 611 Query: 724 PQPLAD 729 P + Sbjct: 612 PLSAEE 617 >UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KCF3_PSEFS Length = 857 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 105/573 (18%), Positives = 199/573 (34%), Gaps = 26/573 (4%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLL 229 L+ + T ++ + + E R + ++ V Sbjct: 277 CLMTWAISRRTTAAALALDASHSSLQNSQNALATSEARFRDVVEASSDWVWEIDAGWRFT 336 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + + A ++ ++ E Sbjct: 337 YLSERFEGVTGLTRYAWIGATMNDLLETESGLLSQWLSAPGRRPDISVQCRYVDAAGQER 396 Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---- 345 + + RR + D LT LPN L+ + Sbjct: 397 TTRLSAREMP--CGGFRGTATDVTEEVEARRRIEFLSQHDALTGLPNRTRLQAFLDGKLK 454 Query: 346 ----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 E L +D + ++ G + + L ++ + + ++ G E Sbjct: 455 ALPSTEQPLVMLSLDLDRFKPVNDLLGHAAGDRVLNEVSARLADCVRHGDLVARVGGDEF 514 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +L+L+ T+ ++ + L R I + + + + LL Sbjct: 515 VLILTDAGTQDEVETLCKRLIESIERTIRIDEQEVFISASIGIAIAPNDAREAAELLRYA 574 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKE 515 ++ A ++ + ++ L + +R A+ +L L+ QP I + + Sbjct: 575 DIALYEAKAAGRN-TWRFYSGDMNARIIERRRLESDLRYAIKHAELRLHFQPRYRIADGQ 633 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF 575 G + ++ G++ PD F+P+ + L VLE+ A P Sbjct: 634 MVGAEALVRWQHPVRGLIAPDTFIPIAEESGLILALSDWVLETACVCAAQWPE---PLFV 690 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 SVNL P + N+ R + K I P V LEITE +A ++ + L + G Sbjct: 691 SVNLSPTEFKRGNLVERTQQALKSSGIDPARVELEITESVMLEDATGALEVMRTLKQLGV 750 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 RIA+DDFGTGY++ L+ D +KID F+ + + D I+++I L + +L+V Sbjct: 751 RIAMDDFGTGYSSLSYLRDFPFDGLKIDRSFLTRLEESDDDKAIIQAIVGLGRTLALTVT 810 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE +ET + ALL + + QGY + RP + Sbjct: 811 AEGIETAEHLALLKAVACEEGQGYFLSRPLDIE 843 >UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YLW9_MOBAS Length = 792 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 115/700 (16%), Positives = 218/700 (31%), Gaps = 31/700 (4%) Query: 54 SILFIFGWRGVVPVLC-GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRW 112 +++++ G +V V +S A ++ +L A L Sbjct: 74 ALIWLLGLSYIVLVSIRAWSRFQRRAPLVSASSRATAHAVRSAFILGAWWGLAILTFYPS 133 Query: 113 ----RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVD 168 + + + G + + F + + F + Sbjct: 134 SDGDAKSVIAVIAMGMICGGGFALSALKRALQAFIIPLFVGSVVALGISQGTNDYFLLAL 193 Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK--EKRAFTLSWLAALSVL 226 LL V + L + + H I L + E + + L Sbjct: 194 LLGFTFIVYRASCARGELLQENLEGHQKLAEQSSIIELLLREFEEGTSDWIWQTGHDGQL 253 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + I G + + + + Sbjct: 254 V---RGGDRFSQIFGRGTDRLIPNGDQTFAGQGLDLSPIAQPMLERTPFRETIIEIPSPQ 310 Query: 287 TEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 +A + + + RR A D LT L N + Sbjct: 311 GAAWIAMTGKPIFGHDGAFTGYRGVASDITATTHAERRIAYLAHHDSLTGLANRSWFAEE 370 Query: 344 PE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + Q S L +DN + ++ G + +R + LL +++ + + + Sbjct: 371 IDRICASPPPQGPTSSLLYLDLDNFKLINDRNGHLTGDQLLRQVAARLLRIVEPGDMVAR 430 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 + G E +V + + + ++G + Sbjct: 431 IGGDEFAIVAHSAPDTASADSLATAILACFATPFSLGAELANVGCSVGIAFPGLDGANPD 490 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL ++ A E ++ + + L +R A+++ +L+L QPI Sbjct: 491 DLLRNADLALYEAKAAGKN-TFCFFESEMAQRLRDRHRLEYDLRCAVERNELVLNYQPIV 549 Query: 513 NKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G++ ++ G + PD F+PL Q VL + A+ Sbjct: 550 DSRTRQTLGFEALVRWEHPLHGRVQPDHFIPLAEQTGAICGIGAWVLREACRNAASW--- 606 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ I + ++ + LEITE + E+ + + + Sbjct: 607 GDHLTVAVNVSVDQFRHGTIMTDVEDALASSGLAADRLELEITESLFIDDPEAVVTVLHR 666 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G RIA+DDFGTGY++ L++ D +KID FV I + + I+ +I L + Sbjct: 667 LRSLGVRIALDDFGTGYSSLSYLRKFPFDKLKIDRSFVNAIKDDRIAHGILETILALGRV 726 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LSV AE VE +Q +L ++ QGY RP AD Sbjct: 727 LDLSVTAEGVEDAEQIDILTRMTCNQFQGYYFSRPMEAAD 766 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 111/604 (18%), Positives = 203/604 (33%), Gaps = 35/604 (5%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 + A + + + + + +I G+ +R + Sbjct: 309 EVWATRVRGAIAEIAAGRRDARIGQATGVAELDALSEGIDQMALEIGKREGELQRLSMVI 368 Query: 219 WLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVS 270 + S+++ +L I GY G R + + + Sbjct: 369 EQSPESIVITDTAGCILYVNEAFQRITGYARDEVLGRNPRILNGGLTPRATYEQMWATLL 428 Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + + ++ + Y +A + + + + + H A Sbjct: 429 AGEVWRGEFHNVRKDGSAYLELATIAPIKDAGGTVTHYVAVKEDITQRKQSEALLHRLAY 488 Query: 328 TDPLTLLPNFRALEQAPEQEAGKSF--------CCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN L Q + ID ++ G + + Sbjct: 489 FDALTGLPNRALLHDRIAQAIRSGVRRESFGMLMLVDIDRFRQLNDTLGHAAGDRLLCEV 548 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNIL---NSRQIHWNNT 431 L ++E + + + + +++ +H+ L + T Sbjct: 549 AARLRASVREEDTVARHGDDDFAVLVERIGETEADALSHAEHVARKLQRALQQPYVLGGT 608 Query: 432 G---LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 F +L+ LL Q ++ + + Sbjct: 609 EGDRHFATLSFGISLFHDGVSSLESLLKQAEVALYRAKQDGRD-IVRFFNPEMQAVVDAH 667 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 L + AL+ L+ QP N+ G + +L G +++P +F+PL Sbjct: 668 ARLEARMHEALEANAFRLFFQPQVNRRGVVIGAEALLRWPLDGGAMVSPAEFIPLAEDTG 727 Query: 547 LSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 R L VL S LA + + +VN+ Q + + + I P Sbjct: 728 HIVRLGLWVLRSACAQLARWQMNEGTRHLKIAVNVSARQFHQPDFVASVKDSVRAAAIDP 787 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE S+ + ++ + +L G R A+DDFGTGY++ LKRL D +KID Sbjct: 788 CRLELELTESAILSDVDETIRRMNELRALGIRFALDDFGTGYSSLSYLKRLPFDQLKIDQ 847 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+D+ + IV +I L+ A L VVAE VE +Q+ L + G QGYL G+P Sbjct: 848 SFVRDMAEDESSEAIVLAILSLSHALGLEVVAEGVEMPEQRDFLRQHGCDSFQGYLFGKP 907 Query: 725 QPLA 728 P+ Sbjct: 908 LPME 911 >UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1Z2_9GAMM Length = 570 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 180/449 (40%), Gaps = 36/449 (8%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + R A DPLT LPN R+ + + + + +D+ + ++ Sbjct: 108 LKRQEDRLRYLAYYDPLTSLPNRRSFNEQLNRILKRCRRHKTNAALLFIDLDHFKRINDS 167 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKL-------------------YQLPGSELLLVLSG 407 G + I + L ++E++ + +L G E +VLS Sbjct: 168 IGHGRGDRLLVEIAKRLTVELREDDAINYYSDNSAEDDSNNSNTEIARLGGDEFTVVLSD 227 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 G+++ + + S I + + F + E L+ Sbjct: 228 IPNAGQVERVAQRILAALSEPIALQSHNPVVTPSVGIALFPQDGEDPDTLVRNADTAMYA 287 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A +E ++ + +Q+ + +R A+ +L L QP + + + Sbjct: 288 AKAQGRA-CFRFYDEEMNAKAVEQLKMEEELRDAMQNNELELRYQPQVDTATGDVVSMEA 346 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ G+++P F+P+ + V++ + + R VN+ Sbjct: 347 LVRWKHSTRGMVSPLDFIPVAERTGQIIELGEWVMKEVARHCNYWDSMGLPPFRVCVNIS 406 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 PL Q ++ I + + + LE+TE ++A++++ ++QL G +A+D Sbjct: 407 PLQFNQSDLPRSIGEFLRESGMQASRLELELTESAIMTDAQTNIEKLQQLKALGLELAVD 466 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR D +KID FV D+ T T A IV +I L+K +L V+AE +E Sbjct: 467 DFGTGYSSLSYLKRFPIDTLKIDQSFVADLGT-TDGAAIVDAIIALSKTLNLRVIAEGIE 525 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q L G LQGY RP D Sbjct: 526 EKEQLDYLVARGADLLQGYFFARPIYPED 554 >UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=A5ETN6_BRASB Length = 1047 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 109/556 (19%), Positives = 195/556 (35%), Gaps = 33/556 (5%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLL--------------LLLCTPYENDFIAGYLVPV 246 R+ + +++ C + I G + Sbjct: 479 RKLEQERDRNYAFLREIIDHIPSPIMVKDVQDRRYVLVNKSSERCFGRPCEQIVGKTLFD 538 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + L A + + Q G+ S ++ L+ Sbjct: 539 LMPR-PIAEKAAADDDRALEHADGLVLEEHPWQTPGLGLRYITSRRIVVTDDRQRPRYLI 597 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAGKSFCCLRIDN 359 ++ + R A D LT LPN + + L ID Sbjct: 598 NVIEDTTERRLADERIAHLAHYDALTELPNRVLFRERIAHEIERARHGMFFALLYLDIDE 657 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + +R+I + + + + +L G E ++L+ + V Sbjct: 658 FKGINDSLGHHVGDELLRTIASRIRSCLAPEDTVARLGGDEFAVLLTMAADRDEVIAKVT 717 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + L + + L + A Sbjct: 718 EILERIREPYRCLGHQLSTDASIGIALAPEHGVEIDQLTKHADLAMYAAKADGR-HTFRF 776 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIM 533 E + +++ L +R A+ +G L+ QP+ G + +L + G++ Sbjct: 777 FEPAMDESARERLQLQQDLRRAITEGQFELHYQPLLGFRENIMTGCEALLRWRHPERGMV 836 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 P F+PL L V+ + A P R +VN+ P+ L +A + Sbjct: 837 PPLDFIPLAEDTGLINEIGDWVMRTACAEAAHWPS---DIRVAVNVSPIQLKSPTLALHV 893 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++P+ + +EITE + + ++ + QLH G RIA+DDFGTGY++ LK Sbjct: 894 ASALSAAGLAPERLEIEITEAVLIGDDDVALDILHQLHAMGVRIALDDFGTGYSSLSYLK 953 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D IKID FV DI ++ IV+++ +A A +++ AE VET QQ L +LG Sbjct: 954 RFPFDKIKIDRCFVSDIGADSSS-AIVQAVVSIAAASNMTTTAEGVETGAQQTALRQLGC 1012 Query: 714 QYLQGYLIGRPQPLAD 729 +QGYL P+P A+ Sbjct: 1013 TEMQGYLFSAPKPAAE 1028 >UniRef50_A6W3H5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3H5_MARMS Length = 804 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 103/557 (18%), Positives = 211/557 (37%), Gaps = 29/557 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLG 254 ++ E + ++ +LL +L E + Y P ++ Sbjct: 230 RKKVETELAKSEAYFKAVLHQSSECMLLTNLKGQILDCNSETCRLLAYDKPTLLMLTIQD 289 Query: 255 VGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIY 312 + + P L WA ++L + ++ + + + ++ + L R Sbjct: 290 IDPEQTPNLLREWADNSLGDPKIFEAHYHRSSGVSFPVEVCGNIITLDHEAHFLASFRDI 349 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMS 364 + + + A D LT LPN R L Q A + +D + ++ Sbjct: 350 TQRKLDQEQVKFLAYYDALTNLPNRRFLNQNIEKVITTAQNNGYIGGLLFIDLDRFKNIN 409 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVN 419 G + + + +L + + + ++ G E +L++ E + R+ + Sbjct: 410 DSMGHHVGDALLVEASKRILACLSQADIAVRMGGDEFVLLIPVLGDNAEEAQSRVTLLAE 469 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L S+ T L + F + +L Q ++ A Sbjct: 470 TLLSQLCQVFRLEQTDLFISASIGISLFPFDGANDAQILRQADTAMYEAKESGRN-AYRF 528 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMT 534 + + Q ++ L + A+ + L QP N + G++ ++ + G++ Sbjct: 529 YRQEMQQQVAERAALEKALHRAISNDEFYLVYQPQVNEHGQLIGFEALIRWSNEELGLVP 588 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR---FSVNLMPLTLLQKNIAG 591 P++F+P+ + L VLE++ + L P ++N+ P ++ Sbjct: 589 PNRFIPIAEEIGLIYDVGNWVLENVCQQLKAWQDIGLPPTFKGVAINISPYQFAKECFVE 648 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + + R + + LEITE N S + +L + R +IDDFGTGY++ Sbjct: 649 SVCDVIDRTQVDSSLLDLEITEGMLVENIASVAEKMWRLKEHNIRFSIDDFGTGYSSLRY 708 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+ + +KID FV+D+ ++ +I+ +I +A +LSV+AE VE Q ++ +L + Sbjct: 709 LQHFPINQLKIDQSFVRDLTSDPQSHVIINTIVSMATHMNLSVLAEGVEHQVEKDILENM 768 Query: 712 GVQYLQGYLIGRPQPLA 728 G QGY +P Sbjct: 769 GCAKYQGYFFSKPVKAD 785 >UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ15_9GAMM Length = 594 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 95/575 (16%), Positives = 191/575 (33%), Gaps = 48/575 (8%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG-----Y 242 R+I ++L + +L + L +S L L + Sbjct: 18 RVIGLSKAEKVLRETEARYALAMQGANEGLWDWDPVSKELYLSARLLRTIGMGKDTFKTT 77 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + + + + L + Sbjct: 78 SNEWLSWVHEEDREHYQQVLCHHLKGETEY--FRCEYRVQNSSGGYVWVLAHGMALRNDQ 135 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 ++ + + + QA D LT LPN + Sbjct: 136 NIAYRMVGSIGDITEQKEYQDKLLHQATYDHLTGLPNRALALDRLSVAISRSRRNKTSVG 195 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G + ++ I L +E + + +L G E L++L ++ Sbjct: 196 LLFVDLDNFKKINDTLGHEVGDLHLKEISNRLGYCFREEDTIARLGGDEFLVILPDLDSP 255 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 +++ + + + + + N + + LL Q+ A Sbjct: 256 KQVEEVCERILATAMQPVTINGYEFSTSASIGVTIYPDDGYEPSGLLRNADAAMYQAKAQ 315 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + +T ++ + + +R AL + L L+ Q I + + G + +L Sbjct: 316 GKD-TFCFFTPEMDQETVRKFTMESYLRQALSKDQLSLHYQSIVSASSGDVVGAEALLRW 374 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTL 584 + G + PD+F+PL + L VLE+ A + +VN+ Sbjct: 375 HCPEYGQVPPDQFIPLAEESGLIVTIGDWVLETACLQAAEWMATACVPFKIAVNVSYPQF 434 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS-----------NAESSMYNIEQLHKF 633 +I + ++ K+ + Q + +++L Sbjct: 435 RDGHIVSTVEKVLKKSGLPAQC-----------LELELTERLLMEDERGCAEALKKLSAM 483 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +++IDDFGTG++ L+R + +KID FV ++ + ++ +I +A A + Sbjct: 484 GVQLSIDDFGTGFSALNYLQRFPVNTLKIDRSFVAELDCSKESPALISAIIQMAHALGIE 543 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VV E VET+QQ L YLQGY RP P Sbjct: 544 VVGEGVETRQQVNFLTLQTCDYLQGYHFARPVPAD 578 >UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KC5_SACD2 Length = 823 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 111/576 (19%), Positives = 214/576 (37%), Gaps = 42/576 (7%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL---LLLCTPYENDFIAGYLVP 245 ++ + ++ + E R TL+ A + + L + + A P Sbjct: 240 LVDVFNAMLNNLAKENEALVVSESRFRTLAESAPIGIFLRNENFETLYVNDRWCAITGQP 299 Query: 246 VFFIIFTLGVGKLRYPFL------NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 Y + S + Y + + + + L Sbjct: 300 HGCSRQEYLKSISDYDLRNYEGMIEGLRSGSVGQTIEYRYRAPGRLNDHILMEY-VTPLE 358 Query: 300 --------SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 + V + A DPLT LPN R + Sbjct: 359 VKEGVSGEHQVRGYVGSVLDVTELKNAQHELEKLAYYDPLTHLPNRRYFKDYLVKQLQLA 418 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 E+++ + + +DN + ++ G + + + + + + ++ G E L Sbjct: 419 KEEDSIMAVLLVDLDNFKRINDTLGHDAGDILLSVLAGRIKQRLHSQDLVARMGGDEFYL 478 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 VL + ++ + + + I N +++ + N +T + L+ Sbjct: 479 VLRNLSSLAEVEKITKRVRSVLASPIRIKNHFVEITASIGVASYPENCDTPEELMRNADI 538 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY- 519 ++ + + Q ++ L + +R A+ +Y QP + + + Sbjct: 539 ALYKAKGDGRNR-VAYFSAELDSQLRDKMRLESKLRQAVSCEAFEIYIQPQYDYKTSKFR 597 Query: 520 --DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR--- 574 + ++ + G + PDKF+ L + + D VL + + R Sbjct: 598 WAEVLIRWEDPEEGFIPPDKFIKLAEETGIINDIDQWVLRATC---KLWAEHGEALRAIG 654 Query: 575 ---FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 S+NL K + + +F+ Y I+P + EITE N E ++ +E+L Sbjct: 655 IEGVSMNLSARQFYSKTLFAYVEAVFEEYGINPSCISFEITESMVIENIEGAIETMERLR 714 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G RI+IDDFGTGY++ LKRL D +KID F+ DI +T D I +I +A+ + Sbjct: 715 NIGSRISIDDFGTGYSSLSYLKRLPIDSLKIDRSFIMDIPGDTNDVAITSAIIAMAEKLN 774 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 LSV+AE +ET++Q L + G ++QGY +P P+ Sbjct: 775 LSVIAEGIETKEQCEFLVEQGCFHMQGYYFAKPAPV 810 >UniRef50_C6X7M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7M1_METSD Length = 1237 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 114/564 (20%), Positives = 197/564 (34%), Gaps = 31/564 (5%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 I R +E+ +L + ++ ++ ++ F Sbjct: 659 LVAIAIERHRSDTQLQERERELRSLLDNSPDTI--TRYDANCRRLYVNQRMLEYFDTTPD 716 Query: 253 LGVGKLRYPF----------LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---I 299 + + F + A T + Sbjct: 717 VVLHTTPRDFPGGSVTVEYEARIRQAFLTGQPDELELPLKASNGKLLVRHIRMMPEFNPD 776 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKS 351 +L + R +R H A D LT LPN L + S Sbjct: 777 GTVASVLAVGRDITEIVEYRQRIHDMAFYDALTRLPNRAMLLEQMRSGILAAAGAQQVFS 836 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + L ++E + L ++ G E +L+L + E Sbjct: 837 LMVLDLDRFKQINETLGHSTGDLLLCEAAARLQDHLREGDMLARMGGDEFVLLLRPGDAE 896 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 L M L + L + R+ + + LL + A Sbjct: 897 PELIAMAQTLIQAFRQPFLVAGRELFVSTSVGIARYPTDSQDADTLLKFADTAMYHAKAQ 956 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILAR 525 ++ ++ ++ L +R A+ Q +L LY QP + G + +L Sbjct: 957 GRN-NFQFYVSALTEVSSARIELETMMRRAIQQQELELYYQPQWDLLENRIVGVEALLRW 1015 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTL 584 + + G+M P+ F+P+ + L VL + + + + +VNL Sbjct: 1016 NQTEHGLMMPNVFIPVAEETGLIIELGEWVLTTACRQAVQWNKDKDEPLKIAVNLSTRQF 1075 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 +Q + + R+ P+ + LEITE + + + G I+IDDFGT Sbjct: 1076 IQNPLLASVTRILHETGCRPEWIKLEITESLLLESNLDILNTLNAFDAMGLVISIDDFGT 1135 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+ L R IKID FVKD+ +T + +V+++ +A +L VVAE VETQ Q Sbjct: 1136 GYSALSYLNRFPVKQIKIDRSFVKDVPHDTHKSELVKAMISIAHVLNLDVVAEGVETQVQ 1195 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L G + +QGY GRP PLA Sbjct: 1196 SDYLKASGCRAVQGYFYGRPMPLA 1219 Score = 43.4 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 35/148 (23%), Gaps = 8/148 (5%) Query: 181 MLFYYLTRM--IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 L +YL R+ I + + A+ L L Sbjct: 118 TLLFYLLRIENITDRKLGEQHRVLMNFALNQVSEAAYLLDENDRL-----TYVNDAACHA 172 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + T S L + +++ + ++ Sbjct: 173 LGYSREELLQMEMGDIHRDGWPEITRTTLNNSAAPHLVAEAMHTRQDGSQFPVEIHASLF 232 Query: 299 ISFSVCL-LYMVRIYHRSEWLNRRWHLQ 325 V L MVR + ++ Q Sbjct: 233 EYEGVPYRLVMVRDIGDRKAAEQQLRSQ 260 >UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYQ8_METML Length = 739 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 108/585 (18%), Positives = 210/585 (35%), Gaps = 48/585 (8%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGK-EKRAFTLSWLAALSVLLLLLCTPYENDF 238 F+ L I + A+ + R+ + + +S L A L + Sbjct: 148 VQGFFVLVTDISAIKEAEKVLRQSEERFRSVVQDQTEVISRLRADGTYLFVNDVYCRFFG 207 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + L+ L S+ ++ L G + + F + Sbjct: 208 KTEQEMIGSTWKPVVYAEDLQRVVDELAMLSSSNPVVMIENRVLSGTGDVHWMQFSNRGI 267 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + + R + A DPLT L N R + Sbjct: 268 FDEYGQLTEIQSVGRDISDRKRAEEEVQKLAYKDPLTGLSNRRLMLDRLRIALATSARSM 327 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + + + + ++E + + + G E ++++ Sbjct: 328 QYGALLFLDLDKFKVINDTQGHADGDLLLVEVAKRITACVREIDTVSRQGGDEFVVLVER 387 Query: 408 P-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWG-----------RFDGNQ 448 E + + + + NN F G+ Sbjct: 388 LGEGLEEASRTVAKIAETIRLTLAEPYQINN-----------AHIHSSSSIGISLFCGHD 436 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + + L+ + Q+ + + + L + + AL L+ Sbjct: 437 QDVDELIKRADMAMYQAKDGGRNRT-RFFDPQMQELVEVRATLESDLHNALATDQFELHY 495 Query: 509 QPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 Q N + G + ++ + G+++P F+P+ + L VL+ + +A Sbjct: 496 QLQVNHENKPIGAEALIRWVHPQRGMISPAHFIPVAEESALILNIGDWVLDEACRQIAVW 555 Query: 567 --PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VN+ Q + ++I ++ I P + LE+TE A + + Sbjct: 556 STNAKMCDLVLAVNISAQQFKQAHFVDQVIAAIHKHGIDPSRLKLELTESVALDDITDVI 615 Query: 625 YNIEQLHKF-GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 L + G +++DDFGTG+++ LKRL D IKID FV+DI T+ DA++V++I Sbjct: 616 AKKNLLRQKVGVTLSLDDFGTGFSSLSYLKRLPLDQIKIDQSFVRDITTDKSDAVMVKTI 675 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D+A+ SL+V+AE VET+ Q A L + QGYL +P P+ Sbjct: 676 IDMAQNFSLNVIAEGVETEAQLAFLKHHECKAYQGYLFSKPLPIE 720 >UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Bacillus sp. SG-1 RepID=A6CIZ8_9BACI Length = 988 Score = 630 bits (1625), Expect = e-179, Method: Composition-based stats. Identities = 101/563 (17%), Positives = 205/563 (36%), Gaps = 26/563 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I + L W + + + + I GY F Sbjct: 264 DITEQKIIEDKLAETERQVLKISNSLDVGIWSMDVKKNQYIFVSK-GFETICGYSAEDFK 322 Query: 249 IIFTLGVGKL----RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISF 301 + + F A+ T + + + Sbjct: 323 QGLLQWEDLIYCEDLHLFEQRKEALHTGKVPKQQYRIVHKNGNTKWVQDELITTFNTKGD 382 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 V + ++ + + + A D LT LPN R EQ ++ Sbjct: 383 LVRIEGILSDITEQKEAEEKVNYIAHHDYLTDLPNRRKFEQELQKFIEQSKMANQEFGVM 442 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + + I LL + +N+ + ++ G E +++ + + Sbjct: 443 YIDMDGFKRVNDTLGHAIGDKLLVEISTRLLDCVPQNDFVARIGGDEFSVLIDKMHSLEQ 502 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + L + + + Q +L + ++ Sbjct: 503 STTIAKKIVAALEVPYKIHGYELFVTASVGVAAYPQDGHDAQTILQKADKALYRAKEMGK 562 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLK 527 ++ + K L N +R A+ +L + QP + + G + ++ Sbjct: 563 N-NYQIYNSSMNIEAYKLYSLENDLRRAVKNKELYFHYQPKVDAQTEKLVGAEALIRWEH 621 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQ 586 + G ++P +F+PL + +L + +++ + S+N+ P ++ Sbjct: 622 PEWGQVSPAEFIPLAEENDLIFKVTSWTFQTICTQIKNWTDRNLPLVPISINVSPKIFIK 681 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +I + ++ P+ + LEITE+ N ES IE+L + G +I++DDFGTGY Sbjct: 682 NEWQEELIYIINNSNVDPRLIELEITEQALIKNEESFSAGIEKLKQLGVKISLDDFGTGY 741 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+ + D +KID FV DI+ I ++I ++A ++V+AE VET+ QQ+ Sbjct: 742 SSLLYLKKFKLDTVKIDKSFVDDILKGK--PTITKAIINMAHEFDMTVIAEGVETRAQQS 799 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K +QGYL +P D Sbjct: 800 FLQKQDCDQIQGYLYSKPILPED 822 >UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIE6_9GAMM Length = 711 Score = 630 bits (1625), Expect = e-179, Method: Composition-based stats. Identities = 94/524 (17%), Positives = 193/524 (36%), Gaps = 19/524 (3%) Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 ++ + + + V ++ + + + Q+F Sbjct: 182 AIEAIGTKDTWRGFYDHPRPVMANLVLQGALNDDIEQHYGKKFKPSELIPGAFEAQDFFP 241 Query: 284 GVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + L F A L+ + ++ + ++ QA D LT LPN Sbjct: 242 KMHDGRWLYFTAAPLLDHQGNTIGAIETLQDITEQKEQEKKILHQAHFDSLTDLPNRFLA 301 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + +D+ + ++ G + + + L +++ ++ Sbjct: 302 LDRLNLLTKEARRTRKKLAVLFIDLDDFKKVNDTLGHALGDKLLIQASQRLKSVIRSSDT 361 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E +++++ + ++ + L + L + + + E Sbjct: 362 IGRLGGDEFIVIINNLDEALDVRPIAEKLLDNFRDVFKVESRELLLTTSIGISIYPDDGE 421 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 LL S A E ++ +++ + + +AL + + L Q Sbjct: 422 EPNVLLRNADSAMYHSKNQGRN-AYHFFTEDMNAGVQRRLQIEEQMHSALGRNEFSLRYQ 480 Query: 510 PIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P+ + G + +L G ++P++F+P+ Q L VLE LK Sbjct: 481 PVLDLKNNRIAGAEALLRWHNPVLGNISPEEFIPIAEQTGLIVPIGYFVLEQSLKAARKW 540 Query: 567 PCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +VNL PL + +I L + + A+ LEITE N Sbjct: 541 STTYSNEFTIAVNLSPLQFKDPKLIVKIKELLASHRLEGNALSLEITEGVLLGNQIKVQE 600 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++L G +I++DDFGTGY++ L+ + +KID F++D + ++ + Sbjct: 601 AFQELSDSGIQISMDDFGTGYSSLNYLREYKFQTLKIDRSFMQDFALDKSAPALINATIA 660 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A A + V+AE VE Q+Q L + G + QGYL+ +P D Sbjct: 661 MAHALDVEVIAEGVEEQEQLDYLIRKGCNFAQGYLLSKPLTEQD 704 >UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YPN8_9CYAN Length = 1177 Score = 629 bits (1624), Expect = e-179, Method: Composition-based stats. Identities = 103/589 (17%), Positives = 206/589 (34%), Gaps = 34/589 (5%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL- 230 + ++ + R +V + + E + + A + + L Sbjct: 580 VLAILVFLMSIPKAEDRRLVEFISSVATQLGTVFERKQAEAKYRNIFKNAVEGIFQMNLE 639 Query: 231 ----CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC----LLNYNQNFL 282 I GY P + V L + + + TL + N+ Sbjct: 640 GLYTSANPALANILGYSSPQVLLNKKTKVKNLYFRSEQYSKFIQTLNKQGKVSNFESQVY 699 Query: 283 QGVETEYSLAFILAVLIS----FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + + S + + + + A D LT L N Sbjct: 700 RQDGRLIWILQNARAIRSSKGKQVIYYEGSIIDITNLKKTEEKLRYSASHDALTNLWNRS 759 Query: 339 ALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 + + + L +D + ++ G M + I + L + Sbjct: 760 FFIERLKKSITRLHKQSNYLFAVLFLDLDGFKIINDCLGHGMGDLLLIEISKRLKISLHS 819 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDG 446 L +L G E ++L Q + + + ++ + +G + Sbjct: 820 GNILCRLGGDEFTILLENISDINEAQEIASRVLKILNKPFTLKGHQVFIGTSIGIVKGTR 879 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 +L ++ A+ + + +++ + +R AL+Q + L Sbjct: 880 EYHLPPEILRDADTAMYRAKKKGKGCAV-LFDAGMRTDALRRLQIQTDLRFALEQEEFQL 938 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QPI + G++ +L G ++P +F+P+ + + VL + L Sbjct: 939 YYQPIIELSTGKIAGFEALLRWEHPQQGFISPGEFIPVAEETGIIVPLGEWVLREACRQL 998 Query: 564 ATHPCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 T K SVNL +++ R+ ++ + H+ + + LEITE ++ Sbjct: 999 HTWKEKFSLSKLLMMSVNLSSQQFT-VDLSQRVDQILQETHVLGRELKLEITETAIMADP 1057 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + ++ + +L + I IDDFGTGY + L + DI+KID FV + IV Sbjct: 1058 QLAIATLNELKQREIMICIDDFGTGYCSLGYLHQFPVDILKIDRSFVNKMQVG-DKREIV 1116 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 R I +LA++ + +AE +ET++Q L L +Y QGY +P + Sbjct: 1117 RVIVELAESLRMDAIAEGIETEEQYIQLQNLHCKYGQGYYFAKPLHPNE 1165 Score = 47.7 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 41/197 (20%), Gaps = 12/197 (6%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 + L I F ++ L VLI L + I+ A+ Sbjct: 262 GGLLLATGKIKLYASIYRQFITVSGAIVILIGLGTTGIVLILRPLTDQMQTEIIERQKAE 321 Query: 198 ILWRRDIAPSLG-KEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 I R + + L L + GY + L Sbjct: 322 IALRHEKDFNQTLFHANPAFLIVLDPEGKV---KLMNDTMLNALGYTLEEVVGTDYLATF 378 Query: 257 KLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSLAFILAVLI----SFSVCLLYM 308 R+ L W + + L + + + + L Sbjct: 379 VPRHNKDALPWVFELMIHRQLPIRTEEKVLMKNGKKIIVEWYGRAVFNPETDEYEYFLGA 438 Query: 309 VRIYHRSEWLNRRWHLQ 325 + L Sbjct: 439 GLDITERKRTEEELQLL 455 >UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21G77_SACD2 Length = 878 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 105/570 (18%), Positives = 207/570 (36%), Gaps = 29/570 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY 242 R + A + +R L+ LA + +L + IAG Sbjct: 289 RHHILIMRDTTEIEIARAQHEDEVERFRILADLAPVGILQANSDWSGIYANDRWCEIAGR 348 Query: 243 LVPVFFIIFTLGV---GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + + L L A+S FL+ + + I Sbjct: 349 SMSDILELGWLSAIHPDHFHNVIEPLRTAISEGKEFKRECLFLKPNSEQTWVELHARPQI 408 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------- 349 + + + A DPLT L N + E Sbjct: 409 STNGDITGFIATILDSTFRHEAEDKLRELAEHDPLTGLANRAMFQHRLEHGLSRTHRHGS 468 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + CL +D + ++ G + + + L ++E + + ++ G E +++L G + Sbjct: 469 LALLCLDLDGFKNVNDTLGHDSGDELLIEVAKRLTKCVREEDTVARVGGDEFMILLEGLK 528 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD-GNQETLQPLLGQLSWLAEQS 465 + + N + + G++ + L+ Q ++ Sbjct: 529 DAQIAAEVSEKILNSLEPPCSINRQEVFISTSIGITFATKGDKNDSKSLMKQADMALYRA 588 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEI 522 + + +++ L N++ AL + + ++ Q + + G++ + Sbjct: 589 KHEGRN-NYQYYSPDLERASQERLYLGNSLHHALQRTEFQVFYQFKSSLSTHKVTGFEAV 647 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNL 579 L G + PD+F+P++ + L + + A + +VN+ Sbjct: 648 LRWEHPRRGQLQPDQFIPILDESGLIVPVSRWLTHTSFMQHAKWKAKGLIEKDAKIAVNV 707 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P L + + I P +VI+EITE ++E + + L + G I++ Sbjct: 708 SPRLLRDPYFIRGLANSIQDSKIDPTSVIIEITETALLEHSEQTTDALNGLKRIGVAISL 767 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTG+++ LKR D IKID FV++++ ++ D IV+++ LAK+ L+VVAE V Sbjct: 768 DDFGTGFSSLTHLKRYPIDQIKIDRSFVQNLLKDSGDKAIVKAVIVLAKSLKLTVVAEGV 827 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E + L L QG+ + +PQP + Sbjct: 828 EDKATLDYLASLNCDEYQGFYLNKPQPAEE 857 >UniRef50_B3E7H1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E7H1_GEOLS Length = 933 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 106/682 (15%), Positives = 206/682 (30%), Gaps = 59/682 (8%) Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFF 147 V++ S + + T + R L+ + + Sbjct: 254 VLIASMQRLNTVNWVLAASYPETDAYAPV--RTARTWFIIATLLGMAVAVLLVLFMMRLL 311 Query: 148 DFPLK-ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 PL +++ + + L + + + + + + Sbjct: 312 TRPLAQLASHVAELPEKRGAERFIHL--------PVNGEIGNLTGAFNSMVEEIDQSTQA 363 Query: 207 SLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 E+R ++ + GY F +L + Sbjct: 364 LRNSEQRYRIVTEFTNDFTYWRRPDGSFEFISPACLEVTGYSREELFAQPSLMEEMIHPG 423 Query: 262 FLNLTWAVSTLCLLNY-------NQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRI 311 + ++ + + ++ + L Sbjct: 424 DREMFDRMAAESGEEINCNNEELEYRIITKGGNTRWVRHTCRPIVDENGVFLGRRGCRSD 483 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGK-----SFCCLRIDNLEF 362 + L + L D LT LPN Q ID + Sbjct: 484 ITEHKQLADQVSHMVLHDLLTGLPNRSLFADRLFLATAQRERGDHDLTVVLFFGIDRFKL 543 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + L L+ N+ L + G +L G E+ M + Sbjct: 544 INDTLGHETGDRLLIMVAERLRKLLHPNDTLCRFGGDVFAFILPGRESRHEAVTMSYRVL 603 Query: 423 SR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + + + + + L + + Sbjct: 604 ASLADPFNPSGQQVTLSGSIGIAISPQDGTDAETLQKNAETAMYDAKRSGKN-SFRFYAR 662 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 ++ Q + + L N++ L GD L+ QP N E + +L + G++ PD Sbjct: 663 EMNAQAAEMLRLDNSMPQGLVNGDFYLHYQPQLNLEDNSVVAVEALLRWRHPELGMIPPD 722 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIR 595 +F+PL + + VL + A D R +VN+ + + + Sbjct: 723 RFIPLAEESGFIIKLGEWVLRTACAQCAAWQQDGPAPLRIAVNVSGCQFNEPDFVDMVST 782 Query: 596 LFKRYHISPQAVILEITEEQA--------FSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 +SP+ SN + ++ ++ L G +AIDDFGTGY+ Sbjct: 783 ALSSSGLSPEY--------LELELTESLLISNEQQALQKLQLLKSMGIYLAIDDFGTGYS 834 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK D +KID F+ DI+T+ DA I +I + + L V+AE VET++Q Sbjct: 835 SLAYLKHFPLDRLKIDKSFINDILTDPDDAAITEAIIAMGHSLKLKVIAEGVETREQLLF 894 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G +QGY + +P D Sbjct: 895 LEDRGCDEMQGYYLSKPLSEHD 916 >UniRef50_C6BS66 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS66_DESAD Length = 1040 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 96/552 (17%), Positives = 207/552 (37%), Gaps = 26/552 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + R L + ++ L + T + + GY Sbjct: 470 AERKIFRHKSRFMQLFESSPQAIALTDSKGNVVDTNRAFNKLFGYSTEEMAPCCENLSPT 529 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRS 315 + ++ + + + + Sbjct: 530 NTGKIRANLKKILGGETYRTEDMRRHKNGRLIPVSILGYPFLYNEEISGTFIIYDDISQR 589 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRH 366 + RR Q+L D LT LPN + E+ E + L ID + ++ Sbjct: 590 KEYERRLSYQSLHDSLTGLPNRTFFLERLEETLDMSRKIPERTFAVLMLDIDMFKRINDS 649 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NS 423 G + + + + ++ + + ++ G E +++ T + ++ + Sbjct: 650 LGHQAGDELLIEVGKRIKCCLRPVDTVARMGGDEFAVLIEDFSTPQMVIQIIRDIRNEIR 709 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + ++ + + + E + ++ ++ + + Sbjct: 710 KPMSISSREVVISSSIGIVFKTSSYEHPEHIIRDADISMYKAKEQGVNK-FKVFNKTMHE 768 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLP 540 + + +L+ IR + + + Y QP+ + + G++ ++ + G +TPD+ +P Sbjct: 769 KALQSLLIETEIRQGIPENEFFPYFQPVYSMQNRNLAGFEALVRWNHPERGFLTPDQIIP 828 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLF 597 + + L D +L ++++ +VNL P L + ++A I + Sbjct: 829 VAEETGLIVELDRIILFEACRFMSAWIRLYPNANDLFLTVNLSPSQLSKPDLAEAIETIV 888 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + I + LEITE +S N++++ + G R+A+DDFGTGY++ +L+R A Sbjct: 889 QETKIPADNLKLEITESAIMERNAASSLNLKKIGEMGIRLAVDDFGTGYSSLAQLQRFPA 948 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +KID FV + ++ IVR++ L + S+ V+AE VET++Q LL +G Y+Q Sbjct: 949 STVKIDRSFVSHMASDHESLEIVRAVNALGHSLSMDVIAEGVETREQLILLKDIGCDYVQ 1008 Query: 718 GYLIGRPQPLAD 729 GY +PQ D Sbjct: 1009 GYYFDKPQTNED 1020 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 93/430 (21%), Positives = 170/430 (39%), Gaps = 17/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQEAGKSFCCLRIDNLEFMSRHY 367 E R AL DPLT LPN L G + + +D+ + ++ Sbjct: 440 ERELAQGRLTHHALHDPLTGLPNRVLLLDRLEVALAQRSRGGVAVAFVDLDHFKLINDSL 499 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G I + L +++ + + + G E +++ E ++ + L + Sbjct: 500 GHAAGDTVITAAATRLRAVVRPGDTVARFGGDEFVVLAESVVDERDVEGLAERLAGALAE 559 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + G LL ++ + + ++ Sbjct: 560 PFDLAGDEVFVTASIGIAVSSGTGGDAHGLLRDADAAMYRAKEAGRAR-HEVFDSVMRAG 618 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 +++ ++N + AL++ +L+ QP + G + +L + + G++ P +F+P+ Sbjct: 619 AIRRLEIVNDLHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGLIPPLEFIPV 678 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + L VL + + T SVNL L Q +A + + Sbjct: 679 AEETGLINDLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRLAEEVAAALE 738 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++LEITE ++ ++++ +E L + G R+AIDDFGTGY++ L+R D Sbjct: 739 DSGFPADQLVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSLTYLQRFPID 798 Query: 659 IIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 I+KID FV + + N ++ + R+I LAK L VAE VE + L L Q Sbjct: 799 ILKIDKSFVDGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVRELQSLHCDIGQ 858 Query: 718 GYLIGRPQPL 727 GY RP Sbjct: 859 GYFFARPLDA 868 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 10/139 (7%), Positives = 33/139 (23%), Gaps = 14/139 (10%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-------------PYENDFIAGYLVPV 246 + + E + ++ A+ +++ Y + + G + + Sbjct: 136 RNQTESALHQLEMKYRAVTESASDAIVSADARGLIVSWNRGGEAMFGYAAEDVIGKPLTI 195 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + LT + + + TE+ + L+ Sbjct: 196 LMPERYRDAHERGMGRFLLTGEPRVIGSGAVEVHAQRADGTEFPVELSLSHWAEGEGRFF 255 Query: 307 -YMVRIYHRSEWLNRRWHL 324 ++R + Sbjct: 256 TGILRDITERKRAEAALAR 274 >UniRef50_A1SWE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SWE1_PSYIN Length = 703 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 105/500 (21%), Positives = 200/500 (40%), Gaps = 31/500 (6%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRS 315 Y +L + + F + + VL L+ +++ Sbjct: 200 YVLTSLQALIEKKIPYDIEYRFRRPDGKVIWIWDRGQVLEYDDQGKPKLLVGIMQDITEK 259 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGK----SFCCLRIDNLEFMSRHY 367 ++ L A D LT+LPN L E + L +DN + ++ Y Sbjct: 260 KFNQSEIELMAFYDTLTMLPNRALLNDRLNLAIEHSKRFEKYGAVLFLDLDNFKILNDSY 319 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNIL- 421 G + + + + ++++++ + + G E ++VL+ ++E Q + + Sbjct: 320 GHQAGDDLLVIVAQRIQSVIRKDDTVARFGGDEFVIVLNELDSEPVKAAIKAQRLAQSIC 379 Query: 422 --NSRQIHW------NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 ++I+ + + F G + LL Q+ + + Sbjct: 380 HSIKQKINIKISNMAADIDYFITASVGITIFYGQSKVPSELLQLADLALYQAKKNGRDDS 439 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGG 531 + ++ + L +R +L Q D +LY QP + + + ++ + G Sbjct: 440 -AMFDPVMQEKLDYSTCLDKELRQSLKQKDFVLYYQPQYDAKQNLVSAEALIRWNHPELG 498 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNI 589 ++ P F+ + + NL VL + L + SVN+ + QK+ Sbjct: 499 LVNPGDFIKVAEESNLILPIGDWVLSEACQQLKKWQSDPQYQHLSLSVNISAKQIWQKDF 558 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I R+ I+ + LEITE + + + L FG ++DDFGTGY++ Sbjct: 559 VAGIKRIVSDSDINVSKLKLEITESILLRDINGTAEKLNDLVAFGLTFSLDDFGTGYSSL 618 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK L D +KID F++D+ N +D ++V+SI DL K ++VVAE VET+ +L Sbjct: 619 GYLKNLPIDELKIDQSFIRDLFDNKMDLIMVKSIIDLGKNFGINVVAEGVETEAHFEILK 678 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G + QGY RP P+++ Sbjct: 679 EFGCKIYQGYYFSRPVPVSE 698 >UniRef50_A3QBK2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella loihica PV-4 RepID=A3QBK2_SHELP Length = 816 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 96/576 (16%), Positives = 206/576 (35%), Gaps = 19/576 (3%) Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 +L+ + R + + + + + ++ + L Sbjct: 236 GHVAGMLLTLTDITSIKRAKSQLDTENRRLKIMLNAIGDAVIATDSEAMITFMNPIAERL 295 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 D I ++ V + + P + + N T + Sbjct: 296 TGWVCRDAIGLHIEQVMDLCDAKTKYRSPNPVTIAIKEKRNVA-MALNCQLNSLDGTTFQ 354 Query: 291 LAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 + A + + + + S ++ + A D LT LPN L Sbjct: 355 IEDSAAPITDSEGKVTGGIIVFHDCSESVAMSLKMSHLANHDQLTDLPNRILLHDRINHA 414 Query: 348 --------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + ID+ ++++ G I+ + + L L+ N L ++ G Sbjct: 415 CAVADSYDKSVALMLIDIDHFKYLNDSLGHSYGDQVIKQVAKRLQSLIDPNATLGRIGGD 474 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +L+L ++ + + + + + + + + L+ Sbjct: 475 EFVLLLPSLTATSQVDSIATDIVRSLNTPFRIDGQEYTLSVSVGISIYPSDALRAEELMT 534 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE- 515 + ++ E + + TK+ L+ +RTA+D + +Y QP + + Sbjct: 535 HVDAAMYRAKDLGRNR-FCYFSEDLEQELTKRHELVTLLRTAIDTEAIEVYYQPKVDLKT 593 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G + + G +++P F+PL + L + +L+ + Sbjct: 594 KEIIGAEALARLYDPSGKLISPLDFIPLAEETGLIHQLGEIILKQSCMAAKAWQKRGRPL 653 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 + +VN+ + ++ + + + LE+TE + + ++ + L Sbjct: 654 QIAVNIAAKQFTNPEFCDSVAKVLELTGLDSSFLELEVTESSLMYDFDEALNVLNTLSSL 713 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G IAIDDFGTGY++ LK + +KID FVKD++ + IV+++ LAK+ L Sbjct: 714 GLSIAIDDFGTGYSSLSYLKFFPVNTLKIDQSFVKDMLGDEQSLDIVKAVIHLAKSLKLK 773 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++AE +E +Q L L + QGY+ +P PL + Sbjct: 774 LIAEGIEDAEQLQKLVALECEQGQGYMFSKPLPLKE 809 >UniRef50_A0YZ09 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YZ09_9CYAN Length = 776 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 95/578 (16%), Positives = 193/578 (33%), Gaps = 42/578 (7%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 + +R E + LS L+ + Y+ P F I+ Sbjct: 161 ALQQEIAERQRIEESLRESESKFRQLSEHIQEVFWLMGYDATSKQFTAIEYVSPAFATIW 220 Query: 252 TLG---------------VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---F 293 + L + + T + F Sbjct: 221 GKTCESLYENPWEWLSSIHSDDHERVEKAFTEKAILGSFDEEYRVVHPDGTVRWIRDRGF 280 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------- 345 + + + + + L D LT L N Q E Sbjct: 281 PVTDDKGEVYRVAGIAEDITNLKRAEAHLVRETLHDSLTGLANRTYFMQRLEMAIKKRNR 340 Query: 346 -QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +D+ + ++ G ++ + I R L +++ + + +L G E ++ Sbjct: 341 HNNYRFAVLFIDLDDFKRINDTLGHLIGDQLLMQISRILTGSVRDIDSVARLGGDEFTIL 400 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + + + ++ + + + + + N + ++ Sbjct: 401 VEDVQDWQDVLNITQRIQEQLTSAVQLEHHEIFTSTSIGIVFSTPNYQNGTEVVRDADIA 460 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE------ 515 ++ A + + + Q V L N +R A+ +L LY QPI + Sbjct: 461 MYRAKADGKG-CYEVFDRSMYDQVLHLVELENALRQAIANQELHLYYQPIVSLRDNSQDH 519 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG- 572 EG++ + G+++ +F+ + VL+ Sbjct: 520 LIIEGFEVLSRWHHPKKGLISASEFISIAEDTGQINEIGEWVLQQACIQFQQLRSHYPDV 579 Query: 573 --PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 FS+N+ L + ++ + + I P + LE+TE N + ++++ Sbjct: 580 TNLYFSINISGRQLRESSLLNLLDHTLQTTQIPPHCLKLELTESSLIENTTIAAKILKEI 639 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G I++DDFGTG+++ L + ++IKID FV+ + T + I+ SI LA+A Sbjct: 640 QQRGIEISLDDFGTGFSSLRYLHQFPLNVIKIDRSFVETLDLGTRERCIIHSIVTLARAL 699 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VAE +ET+QQ L L QGY +P P Sbjct: 700 GFATVAEGIETRQQLEKLRSLECDSGQGYFFSKPIPGE 737 >UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HUB1_LYSSC Length = 581 Score = 628 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 90/540 (16%), Positives = 197/540 (36%), Gaps = 28/540 (5%) Query: 217 LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + + +++ ++ +F+ GY +L + Sbjct: 27 IFENVSEGIMITDEYKKIVMVNPAFEFVTGYKRDDVVGKTPAVLQSGVHELPFYLEMWEQ 86 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + Y + + + + + Sbjct: 87 IRQEGIWQGEIWNRRKTGDVYPEWLTIVCVTNDEGKVTNYCGIFTDLSERKIVENELEKR 146 Query: 326 ALTDPLTLLPNFRALEQAPE----------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 LTD LT + N A + + + L +D + ++ G + Sbjct: 147 LLTDSLTEVSNRFAYIERMDNLLESTSAISHSVQHAVYFLDLDRFKQINDTLGHAVGDSI 206 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTG 432 + + + L L++ + + + G E ++ L+ + + S + + N Sbjct: 207 LIEVAKRLKQLLKNKDIIARYGGDEFVITLTNVKNVKEAAKFAEQIISNIEKPMMINGQE 266 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + + + L+ S + + + + +LL Sbjct: 267 VFISTSIGVSVYPVDGRNTEELINCADRAMTYSKKNGLN-GYSFYFDELQTDAQRVLLLD 325 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 + +R A+D + L+ QP N++ +G + ++ G ++P +F+P + L Sbjct: 326 SELRRAIDNREFELHFQPKICMDNEQIQGLEALVRWNNERLGFVSPGEFIPYAEETGLII 385 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 +LE + + ++N+ + Q N I + +RY++ + Sbjct: 386 PLSEVILEKACEAVIQMQKYGWKIPVAINISSIHFKQHNFLDSIQTILERYNMPANNFEI 445 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE ++A ++ + +L + GF+I+IDDFGTGY++ L R D +KID F++ Sbjct: 446 EVTERTVMNSANETVSKLVRLKQLGFKISIDDFGTGYSSLSYLVRFPLDCLKIDRSFIQH 505 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I + +V +I ++ + VVAE VE QQ +L K+ +QGY +P PL D Sbjct: 506 IGSLDEKQAVVDAIIQMSHRLKMKVVAEGVEQAQQVDILRKMNCDIIQGYYYSKPLPLND 565 >UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAR7_SULNB Length = 958 Score = 628 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 98/553 (17%), Positives = 207/553 (37%), Gaps = 27/553 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLG 254 ++A T+ +++ ++ + GY + + Sbjct: 392 AYIRQQKILQQAATVYENIGDGIVITDENKKIISINPAFSDLFGYTKEELVGKEPMIIMS 451 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRI 311 + + + + N+ + T + + + +AV+ + + + Sbjct: 452 LKEDKVFYGNMWHQLLTAGRWSGRVENVTKDGKVLPVWLTIAVVRNEKQDIQNYIAIYTN 511 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + + + A D LT LPN + E + + + + +D + + Sbjct: 512 LEEIIKMETKANYLAYHDSLTGLPNRSSFEMRINEILSVADIEKDKIAVLFIDLDRFKVI 571 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + + + + + L ++ G E ++++ + L Sbjct: 572 NDTLGHHIGDEMLIELAHRIQTQLDNDTLLARIGGDEFVVIMKLKMHKKEAGEQAEKLLD 631 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 I N L+ + + + ++ + + Sbjct: 632 VIREPIDIQNYHLNTTASIGIAIYPDDGKDKNEIVKHADSAMYHAKEKGKD-TFQFYTKQ 690 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 +S ++ L + A+++ +LLL+ QP E G + +L GI++P+K Sbjct: 691 LSLDVEARLNLEQELLHAIERKELLLHFQPQYALESRNIIGVEALLRWKNEQLGIVSPEK 750 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRL 596 F+ + + L V E K + S+N+ + +++I R+ + Sbjct: 751 FIGIAEETGLIVSIGYFVFEEACKTYMHWQKEGIDIDSISINMSSIQFREEDIFERLQEI 810 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 R I + +EITE + ++ +E L G +I+IDDFGTGY++ LKRL Sbjct: 811 ILRIGIPAHKIEIEITERFIMEYSTINLTILEDLRNIGCKISIDDFGTGYSSMSYLKRLA 870 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D IKID F+ D+ ++ DAM+ ++I L+K+ V+AE +ET +Q+A L K G Sbjct: 871 LDTIKIDKSFITDLPHDSHDAMVSKAIIALSKSLGYQVIAEGIETPEQEAFLKKNGCDIG 930 Query: 717 QGYLIGRPQPLAD 729 QG+ +P D Sbjct: 931 QGFYFAKPMTSED 943 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 628 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 118/638 (18%), Positives = 226/638 (35%), Gaps = 35/638 (5%) Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 RW + + + + I+ + + + Sbjct: 572 WRWVLARGAARRGPGGRLNRVAGALADITDHKQGDAIAGILFHIANAINETRDLDELFLS 631 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 + + F+ + + + +S A S L + Sbjct: 632 IHTALRRHVQAPNFFIALINEPEDRLDFAYFADERDARYNPVEH---ISDPAVQSPTLEV 688 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + T + + + + + L P + + + + +Y + Sbjct: 689 IRTGRQVHLHSDDIEAR-PVFGSRPAAWLGTPLRSRGKVIGAMVVQHYE------DSEFF 741 Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG 349 S ++ + + + AL DPLT LPN L E+ Sbjct: 742 SARDAELMVPVAEQVAVAI-----ERKQGEEMLTHLALHDPLTGLPNRALLLDRIERAIQ 796 Query: 350 ---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + L +D +F++ +G + + + R + P+++ + + +L G E Sbjct: 797 RRRRNDSYRFAVLMLDLDRFKFINDSHGHTTGDNLLVEVARRMRPVVRAGDTVARLGGDE 856 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 L+L ++ R+ + L + R + + +T LL Sbjct: 857 FALLLEDVDSPRRIVQITRRLLAALERPVRMGAKVVRTSASIGMVLRTQGYDTADALLRD 916 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNK- 514 Q+ A + + T + + L + A+ + L L QP+ + Sbjct: 917 ADIAMYQAKAQGKGR-FRVFNQSMHRHTMEMMTLEGDLSMAMRRKQLYLEYQPVLAVDGA 975 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--- 571 G++ ++ G + P +F+P+ + L R VLE LA Sbjct: 976 RLLGFEALVRWRHPTEGAVPPARFIPMAEETGLILRIGQWVLEQAAATLARWRATLPGAH 1035 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 SVNL Q N+ GR+ R+ + P+A+ LEITE + + ++ +E L Sbjct: 1036 DLYVSVNLSARQASQPNLTGRVARILSDTGLPPEALKLEITETAIMKDPDGALQRLEALR 1095 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G I IDDFGTGY++ L+R D +K+D FV + + + IVR++ L ++ Sbjct: 1096 RLGVGIGIDDFGTGYSSLAYLQRFPVDTLKVDRSFVSAVAGDAENREIVRTVVTLGRSLG 1155 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VET +Q A++ +LG +QGY RP + Sbjct: 1156 LHVVAEGVETAEQFAIVAELGCHSVQGYHFSRPV-AEE 1192 >UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGP3_OLICO Length = 825 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 133/746 (17%), Positives = 263/746 (35%), Gaps = 35/746 (4%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRG 63 L+ +++ F + + + S + + M + + I+G R Sbjct: 53 AGLVCGCGVWSTHFIGMLAYSPGVPITFDFTMTMVSFAVAVVMMTAGFVAA---IYGERT 109 Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR-YGLTSRYVW 122 ++ G + + L + S V + +L G + L + Sbjct: 110 WSSLV-GGVIVGIAISVMHHLGIVALRMSADIVWMPDLLVLSAVCGIVFSTLSLFTVRQG 168 Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 + G+ + ++ I +D +LS+ A ++ ++ Sbjct: 169 TAITHSGIAAALLATATLSDHIIAVSAIGLIPDINTVSDEAGLSPIVLSISVASMMVAIV 228 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-------LLLLCTPYE 235 L I + + R+I + + L + L + + E Sbjct: 229 IACLIGAISDRRSRRHMNERNIQLNAAIQNIMQGLCMFGPDNCLQLWNDKYVSMYRIAPE 288 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + + + +F G F + S + S+A+ Sbjct: 289 DIRVGATVEELFAARKKAGTIVKELDFYSTRLWDSVKNRESARWVLELVDGRTISVAYQA 348 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + + R A D LT L N A Q+ Sbjct: 349 M----ENGGWVGTHEDITEQRKSEARIQYLAQHDSLTGLFNRVAFNDHVRKVWQKAAAQK 404 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L ID ++ YG +R R L + + +L G E ++V S Sbjct: 405 HPFTILSLDIDRFSEINDTYGHSTGDAFLREAARRLQAACG-SAFIARLGGDEFMIVSSE 463 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 E R + + + + + G + + E ++ L+ + Sbjct: 464 GEQPARAGDICTRVLTAFEMMFNIDGHAIHSGCTVGVSIYPQDGEDIETLISNAGVALYR 523 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEI 522 + ++ E + Q ++ ++L+ + L+ L L+ QP + G++ + Sbjct: 524 AKKEERG-SIRFFEPEMDRQLREKRVMLHDLDLVLENKQLELHFQPQADPDGTPFGFEAL 582 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 + + G++ P F+PL + D +L + A+ P ++N+ P+ Sbjct: 583 VRWRHPEKGLVPPGVFVPLAEETGAIVAIDEWILRKACQEAASWPK---PLSIAINVSPM 639 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + ++ G I + ++P+ + +EITE + + + ++ G R+A+DDF Sbjct: 640 SFQHNDLPGLIHSILLETGLNPKRLEIEITEGVLVQDFSRACSILRRIKNLGVRVAMDDF 699 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L+ D IKID FV I N + I+R+I L +A +L V+AE VET+ Sbjct: 700 GTGYSSLSYLQSFPFDKIKIDQAFVAQINKNVQSSAIIRAIISLGEALNLGVIAEGVETE 759 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ L G +QGYLIGRPQP+A Sbjct: 760 LQRDFLADAGCFEMQGYLIGRPQPIA 785 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 98/438 (22%), Positives = 176/438 (40%), Gaps = 16/438 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + E R + A +D LT LPN + E + + +D Sbjct: 311 ALAQEVREREQAQERLNELAYSDSLTHLPNRTLFQDRLHQAMEYAKRHERLIALLFIDLD 370 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + + ++ G ++ I R +++E + L +L G E ++L+ + V Sbjct: 371 DFKRVNDSLGHAAGDRLLQEIARRFGRVLRETDTLARLGGDEFTVILTDIQRPEDAVTFV 430 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L + M + + LL Q+ + D Sbjct: 431 RKLLDTLRAPFMLGEQSITMSASIGITLYPSDDTAEADLLKDADTAMYQAKSRGKN-TFD 489 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 ++ ++ + +R ALD LL+ QPI + +G + ++ G+ Sbjct: 490 FYAPELTQSVRARLTMEGDLRAALDTNQFLLHYQPIVSLNGAGVQGLEALVRWQHPVRGL 549 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAG 591 + PD+F+P+ L V+++ LA ++NL P+ + + Sbjct: 550 VPPDEFIPVAEDSGLIHEIGDWVIDAACAQLAQWDARGLSHLTLAINLSPVQFRRDGLVS 609 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI R +++ I+ + + LEITE ++ L G + IDDFGTGY+ Sbjct: 610 RIARRLRQHSIASERLHLEITESLLMEQNRHVAETLQTLDAMGIGLCIDDFGTGYSALNY 669 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+ +K+D FV+D++ +VR+I +A A L VVAE VE + Q LL ++ Sbjct: 670 LRHFPIRQLKVDRSFVEDMLHAEDTRALVRAIVLMAHALRLEVVAEGVEEKSQLELLREM 729 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGYL+ RP P A+ Sbjct: 730 GCDQVQGYLLSRPLPAAE 747 >UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XP68_PSEMY Length = 1254 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 127/588 (21%), Positives = 215/588 (36%), Gaps = 35/588 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------ 228 +++ L R +L D + E R TL A ++LL Sbjct: 659 GQVVFTRLSLRAVRGGAGRQTLFLLLVEDTSARREAEARYHTLVEHAPEAILLFSPEGGI 718 Query: 229 --------LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 L D + + + G R +L A++ + Sbjct: 719 VECNENALQLLRYRREDLLGKTIQSISPPRQADGSLSSRTGREHLQRAIA-GDTPVFEWT 777 Query: 281 FLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + L + + + V + R A +D LT LPN R L Sbjct: 778 HRDSAGRQLPCEVRLVRMPGEELLIRASVLDISERQRYQREIERLAYSDELTGLPNRRLL 837 Query: 341 EQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + + +D+ + ++ G ++ + + L ++ + Sbjct: 838 LDRLQHAMDRENREGSLGALLFIDLDHFKTVNDSLGHLIGDALLCEVTTRLARELRTEDT 897 Query: 393 LYQLPGSELLLVLSGPETE-----GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 L +L G E +++L +E + L L + Sbjct: 898 LARLGGDEFVVLLEALGSEPQAVAEHAAAVGEKLLRGLQGSCLIEGHELAISASIGIALH 957 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + +L Q ++ AL + +++ L +R A+ + L Sbjct: 958 PLGLQRAADILKQADTAMYRAKHAGRN-ALHFFAPEMQAAIDQRLQLQGELRQAIARQQL 1016 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP + G + +L L + G ++PD+F+PL + L VLE Sbjct: 1017 QLVFQPQLVLADDTVAGAEVLLRWLHPERGEISPDQFIPLAEETGLIQDIGQWVLEQSCA 1076 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 LA +VNL P L Q R+ +R+ + QA+ LEITE + + Sbjct: 1077 TLARWQAQWPQLVLAVNLSPRELRQAGCVARVEDCLRRHGVPAQALELEITEGVLLEDVD 1136 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + N++QL G R AIDDFGTGY++ LKRL D +KID FV D+ + M+V+ Sbjct: 1137 RCIGNMQQLKAQGVRFAIDDFGTGYSSLTYLKRLPLDRLKIDRSFVADLDGDASGRMLVQ 1196 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I +A+ L VAE +E Q ALL + G QGYL G+P A+ Sbjct: 1197 TILMIARNLDLECVAEGIEQPSQLALLREQGCALGQGYLFGKPMVEAE 1244 Score = 86.2 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 97/318 (30%), Gaps = 13/318 (4%) Query: 9 KNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVL 68 + ++ L + L L +IS ++ + L ++PL + L + +G R + + Sbjct: 7 HRLPRWSW--WLPLPLFHLGTWISLATRLNDG-VALCYLPLVLGLVLCLWWGPRVLPALY 63 Query: 69 C-GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFW 127 + LW + + +T V +LR L R Sbjct: 64 LNALLSVPLWGLPWQWAPLYAL--PETVAVALGWWLLRRHSFDPALGSLADLL---RFLA 118 Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 G++ P + + L++ + A + D ++L + L + + Sbjct: 119 FGVLAPAALVALGLQANLWLTG-LQLGEHWAQASLAVWLNDAINLLA---LATPLLVFGS 174 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 ++ + + D L L+ L+ + + + + Sbjct: 175 PLLRARGWLPESTAADAQALSISRSWRGWLLAFGIFLALMALVGSLPLLVALPFLGIGML 234 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 + Y + + A L LL + F L + +L+ ++ + Sbjct: 235 ALALRYAFAGALYGAVLVFAATLPLPLLRGDPGFAMLDLPRSQLQLAVLLLMGAALLVGR 294 Query: 308 MVRIYHRSEWLNRRWHLQ 325 + ++ + R Q Sbjct: 295 ALGDLRQALSRSARMQQQ 312 Score = 79.3 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 32/354 (9%), Positives = 85/354 (24%), Gaps = 33/354 (9%) Query: 5 HNLIKNIKIF---------TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMP------- 48 + + + L ++ ++P A++ W+ Sbjct: 87 ETVAVALGWWLLRRHSFDPALGSLADLLRFLAFGVLAPAALVALGLQANLWLTGLQLGEH 146 Query: 49 -----LCVMLSILFIFGWRGVVPVLCG--MFCTNLWNFHLSFLQTAVMLGSQ-----TFV 96 L V L+ ++ G + W + + S+ Sbjct: 147 WAQASLAVWLNDAINLLALATPLLVFGSPLLRARGWLPESTAADAQALSISRSWRGWLLA 206 Query: 97 VLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTF 156 A++ L + L + ++ + + PL Sbjct: 207 FGIFLALMALVGSLPLLVALPFLGIGMLALALRYAFAGALYGAVLVFAATLPLPLLRGDP 266 Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 + L++ + ++ L + + + + ++ +L E Sbjct: 267 GFAMLDLPRSQLQLAVLLLMGAALLVGRALGDLRQALSRSARMQQQLARANLAMEASPLG 326 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLC 273 ++ A L L+ I GY F + + L A+ Sbjct: 327 VTIADARQPDLPLVYCNAAFTQITGYSADETLGRNCRFLVADDHAQLELQPLRSALREGR 386 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSV--CLLYMVRIYHRSEWLNRRWHLQ 325 + + + +LA + + + + L + Q Sbjct: 387 SGHAVVRNYRKDGRPFWNEVVLAPMRDERGISHFVGLQQDVTERVELAAQVEQQ 440 Score = 45.0 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 41/379 (10%), Positives = 85/379 (22%), Gaps = 62/379 (16%) Query: 6 NLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVV 65 ++ ++ + + LAF + + L+ L + L + I + + L + Sbjct: 195 SISRSWRGWLLAFGIFLALMALVGSLPLLVALPFLGIGMLALALRYAFAGALYGAVLVFA 254 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL 125 L F + L + + + ++ A + R LG + S + Q+L Sbjct: 255 ATLPLPLLRGDPGFAMLDLPRSQLQLAVLLLMGAALLVGR-ALGDLRQALSRSARMQQQL 313 Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLK--------ISTFFGDADAIFTVVDLLSLFTAVL 177 L D PL I+ + D L++ A L Sbjct: 314 ARANLAMEASPLGVTIADARQPDLPLVYCNAAFTQITGYSADETLGRNCRFLVADDHAQL 373 Query: 178 IYNML-----------------------------------------FYYLTRMIVSPHFA 196 L F L + + Sbjct: 374 ELQPLRSALREGRSGHAVVRNYRKDGRPFWNEVVLAPMRDERGISHFVGLQQDVTERVEL 433 Query: 197 QILWRRDIAPSLGKEKRA----------FTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 + A L + + L S+ C I Sbjct: 434 AAQVEQQRAQLLRQNHLFSQTEDIANLGGWVFELGDSSMFWSDGCYRIVERDIHLGPPSF 493 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE--TEYSLAFILAVLISFSVC 304 + L A+ L ++ + V Sbjct: 494 EQALHYYDAPSQTLIIETLQAALGGLDEVDVELRLAARLGGRLVRVRGMAERDDDGSLVR 553 Query: 305 LLYMVRIYHRSEWLNRRWH 323 + +V+ + + Sbjct: 554 VYGVVQDISERKRTESQLR 572 >UniRef50_C4XGB8 Putative response regulator receiver protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGB8_DESMR Length = 801 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 109/541 (20%), Positives = 199/541 (36%), Gaps = 34/541 (6%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 L + C D + + G+ + P + L+ Sbjct: 255 IDLGLSAEGFCVIDAEDRLRFLNASAARMFGLPGLPEPGTPLSDALPQELAASLVRDASR 314 Query: 281 FLQGVE--------------TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + E ++ L +V + L + A Sbjct: 315 VIAWNEPVKKETTFAIGGQDKTLLVSLFPMGLDESRRLAGGIVTDITDRKQLESQLAHMA 374 Query: 327 LTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 DPLT LPN Q + L +D + ++ G + + Sbjct: 375 FHDPLTGLPNRSLCLDRIRQALERSKRRDNYQYAVIFLDLDRFKIVNDSLGHHVGDRLLE 434 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 S+ R L ++ + + +L G E ++VL + + ++ + S + + Sbjct: 435 SVARRLRDCVRSLDTVARLGGDEFVVVLEETGSYREVVRIIKRIRDAMSEVFPLSGHDVH 494 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + E + LL + ++ + + + L + Sbjct: 495 VSASMGIVVSPAIYEKPEELLRNANIALHRAKDEGRNR-FKVFNTRMLEDAIRLMDLESD 553 Query: 495 IRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL +G+ L QPI ++ G++ ++ + GI P +F+P+ L Sbjct: 554 LRAALKRGEFYLDYQPILALRDRRVTGFEALVRWRRPGKGIAPPGEFIPVCEDTGLIVPL 613 Query: 552 DLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 L VL + +A+ SVNL L Q ++ + R+ + + P+A+ Sbjct: 614 GLWVLTEACRTMASWQARFPETAGMSMSVNLSAKQLSQPSLVEDVERILRDTGMDPRALK 673 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE N E S+ +++L G R+++DDFGTGY++ L+R D +K+D FV Sbjct: 674 LEITETVIMDNPEVSILRLKRLKALGVRLSVDDFGTGYSSLSYLQRFPIDTLKVDRAFVS 733 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D+ T+ + IV ++ LA + L VVAE VE + Q +L + QG+L RP Sbjct: 734 DLDTS-ENRKIVGAVVALAHSLGLDVVAEGVELETQSDVLTGFACEAGQGFLFSRPVCKE 792 Query: 729 D 729 D Sbjct: 793 D 793 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 116/693 (16%), Positives = 229/693 (33%), Gaps = 27/693 (3%) Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 W VV V G H +++ T ++ + +S Y Sbjct: 67 WAEVVHVAAGSVLLAGLCPHKGCRSLWLLIAVTTVSLMGWVVWASIHIAPMAAIIPSSLY 126 Query: 121 VWQRLFWLGLVT-------PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 + + LV P + L+ + + + +L+ Sbjct: 127 IGAAMLAAALVFWRRARRIPGNGYSLVALLFALWGLHKLDYPWLAAVPQAVPYGFMLTQV 186 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 ++ + L R + + + G+ A + + C Sbjct: 187 LSIGLGVALLIAADRESRARENEGRRRSQALLHLQGEAMAATANAIFITDRAGRIEWCNK 246 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + + + A+ N + T Y + Sbjct: 247 AFSQLTGWAETEAMGRGARRLLMGAERD-RRMDEALKRGENWRGELNLRRRDGTLYVVDQ 305 Query: 294 ILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--- 347 + + + + R + D LT LPN + ++ Sbjct: 306 NVTPIRDDRGRISHYVVVQEDVTERRRAEERIRFLSNHDALTALPNRLLFREQIQRAIGR 365 Query: 348 -----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 G + L +D+ + G H + +I L+ + E L ++ G E Sbjct: 366 AKTERHGLAVLILDLDDFSHYNDVLGHDGGDHLLLAITERLMSTARGIESLARVGGDEFG 425 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 +L + + + L R N + +G + + LL Sbjct: 426 FLLLTTDGGESVVELAGSLTKAMRRPFDINGHDVQVGAAIGITLYPDDGADADTLLKNAD 485 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 ++ + + + + L + +R A+ + +L L+ QPI + + Sbjct: 486 MAMYRAIEDNPN-GYRFFAPTMDAELALRRRLESDLRKAIQRDELELHYQPIVDTQSRRI 544 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRF 575 ++ +L D G ++P +F+P+ + VL + + Sbjct: 545 ISFEALLRWNHADDGWISPVEFIPMAEGNGMIGPIGEWVLRRACQQMRDWDRMGIPPVPV 604 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ L L ++++ + ++ + + LE+TE +A+++ + G Sbjct: 605 AVNMSALQLKRQDVPMLVRKMLTEAGVPSHRLELELTETTVMEDADAAQRIFADIAGLGV 664 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 R+A+DDFGTGY++ RLKR +KID FV D+ + DA I R+I + A L VV Sbjct: 665 RLAVDDFGTGYSSLARLKRFPVGKLKIDRSFVGDLAEDEGDAAIARAIISMGHAMGLKVV 724 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET +Q A+L + G +QG+L R P Sbjct: 725 AEGVETPEQLAILAEAGCDAIQGFLFSRAVPAD 757 >UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXT2_DESAC Length = 868 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 107/589 (18%), Positives = 215/589 (36%), Gaps = 29/589 (4%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 L + LI + +I + Q+ + + + + L L Sbjct: 267 VLPRQWLRALISGAVLLLFLLIITALLRWQVRRKTEELRRFKQRFEYLQKASPVVLFNLA 326 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGK----------LRYPFLNLTWAVSTLCLLNY 277 L E +++ + +F ++ + + Sbjct: 327 LPTGRAPEVLWVSDNITRLFGFTPEQTYQPGWWQSIIHPGDLQQLEANMRSMPKIGHGSV 386 Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 T + L L + + ++ S + DPLT L Sbjct: 387 EYRLYDNDGTLRYVREELQFLPATATSPAQVVGSWNDITTSREQQDQLSFLTHYDPLTQL 446 Query: 335 PNFRALE----QAPEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN L A + + L +D+ + ++ +G +R L L Sbjct: 447 PNRTLLHLQLQDALAHIETGQDQLAILNLDLDHFKKINETFGFDFGDKILRQTAGRLKHL 506 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGR 443 ++ + + ++ E ++++ G + + R ++ + L + Sbjct: 507 LRLEDSIARMGADEFVIIIQGENIAELASSISRRILHRLGTPLNIEDQELIVTTSVGISL 566 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F + + LL + L +S + +++ + +R A+++ + Sbjct: 567 FPEDGADPETLLKNAEIARYAAKRQGRNR-LHFFSSQLSDNVRENLVMESALRNAIERKE 625 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L+L+ QP + + G + ++ + + G++ P F+PL + L L VLE Sbjct: 626 LVLHYQPQLDLNSGDLVGVEALVRWQRPEIGLVPPGLFIPLAEEIGLINDIGLWVLEEAC 685 Query: 561 KWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + R +VNL + ++ +++++ + + Q + LE+TE Sbjct: 686 RQTIDWDRQGYHVPRMAVNLAVQQIESGHLPQQVLQILQYTGLPAQRLELEVTESAIMIE 745 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + + + + G R+AIDDFGTGY++ LKRL D +KID FV DI TN D +I Sbjct: 746 PKKAADALLEFQSMGIRLAIDDFGTGYSSLAYLKRLPLDRLKIDRSFVMDIGTNAGDDII 805 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 R+I +L+ + + VAE +E Q L + G + QGYL +P P Sbjct: 806 SRAIINLSNSLGMDTVAEGIENTDQLEFLRREGCEIGQGYLFSKPLPAD 854 >UniRef50_A1SBS3 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1SBS3_SHEAM Length = 709 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 113/567 (19%), Positives = 196/567 (34%), Gaps = 36/567 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALS-----VLLLLLCTPYENDFIAGYLVPVFFIIF 251 + E+R + A + + + + G Sbjct: 124 ISALKHAEEALKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQMIGREPDELEPTE 183 Query: 252 TLGVGKLRYPFLN-------LTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISF 301 L V L + S + + + IL Sbjct: 184 DLWVKLLHPDDYQKVMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPVLCRGVILRGADGT 243 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + + R + A D LT L N L + + + Sbjct: 244 PLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCERSKQIGALL 303 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +DN + ++ G + ++ + LL ++ E + +L G E ++V+ + R Sbjct: 304 IIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVIVMENLGIDER 363 Query: 414 LQHM--------VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + V L + L F + L+ LL Q Q+ Sbjct: 364 GAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLEELLKQADVAMYQA 423 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEIL 523 AL + + ++V L N +R + + + L+ QP + G + ++ Sbjct: 424 KEAGKN-ALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVDACGRLCGGEVLI 482 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMP 581 G++ P++F+PL Q +L VL + L SVN+ Sbjct: 483 RWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQISLSVNVSV 542 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + N R++ + +P ++LE+TE N E + + L G R ++DD Sbjct: 543 NQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRVRGVRFSVDD 602 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR +KID FV++I N DA+I I LAK L V+AE VET Sbjct: 603 FGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGLGVLAEGVET 662 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 + Q L Y QGYL G+P + Sbjct: 663 EDQLNFLLAHDCSYFQGYLFGKPCAIE 689 >UniRef50_B2UJT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UJT5_RALPJ Length = 652 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 104/539 (19%), Positives = 185/539 (34%), Gaps = 36/539 (6%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVF--FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + + D + G +P + + +L LN Sbjct: 92 VSYANPSAARLLGLPLDELVGRPLPTVVHAAVDEFETSIHETDWPDLDVLAEGQPQLNQI 151 Query: 279 QNFLQGVETEYSLAFILAVLISFSVC-----------------LLYMVRIYHRSEWLNRR 321 ++ L + +L + + +R Sbjct: 152 FGLHCLDGRTVWVSSNWTPLYTEGGHSTTAAPGAARQGARPYSVLVSLVDITQIREAQQR 211 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRV 373 A D LT L N ALE E + S L +D + ++ G Sbjct: 212 IRHLATHDTLTGLLNRSALEDRLEHALALGRRNRSRVSVMFLDLDRFKNVNDTLGHQFGD 271 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNN 430 +R + L +E + + +L G E +++L + G + + + S H Sbjct: 272 MLLREVAARLQACAREADTVARLGGDEFVVMLESLDAMGT-RRVAERILSAIGAPFHIEG 330 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 L +G + + LL + + + + + +++ Sbjct: 331 QELYLGVSIGIAVAPRDGDDPHTLLRKADAAMYLAKERGRN-NFQTFTSDLDDRVSRRFR 389 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + + +R A D+ + QP + G + ++ D G M P +F+ + L Sbjct: 390 IESGLRRASDRNEFYADYQPRVDVRSGRIVGVEALIRWNSADFGRMMPGQFIQDAEETGL 449 Query: 548 SARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 D +L + LA R S+NL ++ + R + A Sbjct: 450 IVEIDRWILRAACDQLARWRRIGLPHLRMSINLSGQAFSSGKLSDMVRRALSASGLPGDA 509 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 V LE+TE + S + +L G +A+DDFGTGY++ L R D +KID F Sbjct: 510 VELEMTEGILIRDDPSLHALLTELRAMGVSLALDDFGTGYSSLSYLHRFPIDTLKIDRSF 569 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 V+D+ A I R+I +A+A + VAE VE+ Q L ++G QGYL+ RP Sbjct: 570 VQDLPHVAERAAITRAIIMMAQAMGMRTVAEGVESTGQLDFLREVGCDEFQGYLLTRPL 628 >UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCU3_9GAMM Length = 723 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 91/585 (15%), Positives = 189/585 (32%), Gaps = 34/585 (5%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL----------- 226 + + ++ + + L + + EKR L +L Sbjct: 123 VREPILQAKLQVFLELANHRHLIYQQLTDLERLEKRNQLLLKSIGEGILGLSTDGQVTFS 182 Query: 227 ---LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 E + + + F Sbjct: 183 NPVAQQTLGMSEQELEGRSFSDIVYHGDAEQPLVTWEYLPARLACEQGQAYHERIGVFWD 242 Query: 284 GVETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + + ++ + + A D LT L N A Sbjct: 243 RAGQLLPVEYKATPMMVDDDLAGIVIAFQDITERRRTEEQLARLAQYDALTGLVNRNAFN 302 Query: 342 --------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 ++ E + + +D + ++ ++G + ++ + L ++ + + Sbjct: 303 GLLKKALSRSARHEQPLALLFIDLDQFKTINDNHGHEIGDSLLQEVAMRLTDCVRNGDII 362 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E +++L + + + + +G + + T Sbjct: 363 GRLGGDEFVIMLESLQATKDAARVSQSVLDALEAPFTIRGHQIFIGASIGIAVYPDSALT 422 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL +S + + + + L +R A Q + +Y QP Sbjct: 423 ARELLRCADIAMYRSKEEGRNR-YRFFTDEMQESVREALQLEIDLRRAYRQQEFDIYLQP 481 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + ++ + DG + PD F+P + L V + + Sbjct: 482 KICMATESVIGAEILIRWPRPDGSFLPPDVFIPKAEEMGLIHDIGEWVFRETCDTIRSWQ 541 Query: 568 CDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 F++N+ L ++A I + K I P + +E+TE + ++ Sbjct: 542 QQNRIPLDFTFAINISMRQLHTGHLAEDIAAIVKEVGIDPNCLEVEVTESIMMQDPRVTI 601 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + LH+ +I+IDDFGTGY++ L++L D IKID FV+ + ++ IV +I Sbjct: 602 DALNALHQQKIKISIDDFGTGYSSLSHLRQLPIDAIKIDKSFVQALESDGQADAIVNTII 661 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L + V+AE +ET+ + L G QGY +P D Sbjct: 662 SLGHNLDMRVIAEGIETEANRQALTAAGCDVAQGYFYAKPMCRED 706 >UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN4_CHRVO Length = 679 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 97/432 (22%), Positives = 171/432 (39%), Gaps = 19/432 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFM 363 R A DPLT LPN ++ + + + +D + + Sbjct: 232 IQERRRAEERLDHLAHHDPLTGLPNRLLFQKRLSRALSVPDLPPYKLAMLFIDLDRFKDV 291 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + ++ L ++ + L +L G E + VL E + L + Sbjct: 292 NDTLGHYIGDQLLNAVAARLADSIRAEDMLARLGGDEFICVLESIENRDMAADVAGKLLA 351 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + N L + + + LL + Sbjct: 352 LFRQPFCINGNDLYLSASIGISFAGNDGADVDTLLRHADIAMYSAKNAGRNRC-QHYSPQ 410 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 +S ++V+L +R ALD ++ ++ QP + + G + + G++ P + Sbjct: 411 MSEDAEQRVVLERQLRQALDNDEITVHYQPQVDAVTGKLVGAEALARWRHPILGMVPPAR 470 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + L Q+LE L+ LA+ SVNL L +++ + RL Sbjct: 471 FIPVAEECGLIVALGEQILEKSLRQLASWHEAGFPLPSVSVNLSARQLERQDFPQHVARL 530 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 KRY + P+ + LEITE + E ++ + +L G R++IDDFGTGY++ L++L Sbjct: 531 LKRYRLEPRHLELEITESVIMA-TEDAVNILAELRAQGIRLSIDDFGTGYSSLSYLRQLP 589 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 ++K+D F+ I IV +I L+ + L VAE VE Q L G + Sbjct: 590 VQVLKVDRSFILGIG--KGGEAIVHAIMALSSSLGLETVAEGVEEASQLEFLRSAGCHII 647 Query: 717 QGYLIGRPQPLA 728 QG+L P P Sbjct: 648 QGFLYAAPLPAE 659 >UniRef50_B0CBA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=66 Tax=cellular organisms RepID=B0CBA7_ACAM1 Length = 705 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 99/615 (16%), Positives = 199/615 (32%), Gaps = 34/615 (5%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + A T + + T+ L+ + Y + Sbjct: 78 VALGHRIPIILLTGQEDREIDLAAMTAGATDYLVKGMITSALLERSIRYAINHTRTLVAL 137 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV-PVFFIIFTLG 254 + + ++ + + + + + F I Sbjct: 138 QEREEQYNLVAQASNDGLWDWNLQTHQVYYSPRWAAIIGQAEVTLQPSIQEWFDRIHPED 197 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRI 311 + R L ++ ++ + V + Sbjct: 198 KERFRIDLRRHLR--RETTAFECQYRMLHRDQSYRWVSSRGMAVFGPKNRVVRMAGSHTD 255 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEF 362 + AL D LT LP+ + + L D + Sbjct: 256 LT---------NHVALYDHLTGLPSRALFLDQLHRTLTRVNRQTNYLFAVLFLDCDRFKV 306 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ G + + + + L ++ + + +L G E ++L + + + + + L Sbjct: 307 INDSLGHAIGDQLLIEVAQRLTTALRPGDVIARLGGDEFAILLENIAGQDQAEQVASRLN 366 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + + + LL ++ A E Sbjct: 367 RELEKAFELQGHTVYISASIGIALNSDHSPQAENLLRDADNAMYRAKALGKSR-YVVFEA 425 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 + + + + +R A+ + LY QPI + + + ++ G+++P Sbjct: 426 AMRDRVQALLRVETDLRAAIANQEFQLYYQPIISLKTHEIVSLEALIRWQHPQRGLISPQ 485 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQKNIAGRI 593 +F+P+ + L VLE + L SVNL Q ++ +I Sbjct: 486 EFIPVAEETGLILAIGQWVLEESCQQLWQWHQTLTEIPPLSISVNLSRKQFSQASLGKQI 545 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + +S + + LEITE N I QL G ++ IDDFGTGY++ L Sbjct: 546 QSILSETGVSARHLKLEITETMIMENEVMVSELISQLRALGLQLQIDDFGTGYSSLSFLH 605 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 D +KID F++ +VT+T + IVR++ LA ++ +AE VETQ Q L + Sbjct: 606 NFPLDTLKIDRSFIEGLVTDTEKSEIVRTMITLAHNLGMTAIAEGVETQAQLQWLQQHHC 665 Query: 714 QYLQGYLIGRPQPLA 728 +QGYL+ +P A Sbjct: 666 DCVQGYLLSKPLSAA 680 >UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y7_9GAMM Length = 1123 Score = 627 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 102/652 (15%), Positives = 219/652 (33%), Gaps = 36/652 (5%) Query: 103 ILRWQLGTRWRYGLTSRYVWQR-----LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF 157 + G R + R L L+ + + + Sbjct: 461 VTFMLAGRPMRLIFNPTNSFIRSASTNLTQFALIGGFLLTGLFAFLFLSITGRTHRISTE 520 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 + + + + + + + + +K + Sbjct: 521 VTLRTEELSEATKRAQDSEMRIRDVLKEMQLTEQKLLLSDVAFNSTSEAMMITDKSKKII 580 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 +A + + I Y F++ L + + A+ + Sbjct: 581 VVNSA----FSDITGYDGTEVIGRYP---SFLVSGLTKSDFQQLSESFAAAMKAYGIWRG 633 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 +T + ++ + + + + + + A D LT L Sbjct: 634 EIQCRHKDKTMFPAYVSMSAVYDTDGNICNMVGVFSDISEVKEAQAKIERHANYDILTDL 693 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN R L +D + ++ G ++ + + Sbjct: 694 PNRRLFTDRLQQAILRCGRHNEKLCLMFLDLDRFKDVNDTLGHEFGDQLLKQMAVRIQAC 753 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGR 443 ++E + + +L G E ++LS + + ++ L S I L + Sbjct: 754 VREVDTVARLGGDEFTIILSEFDGKSHAVNIAQKLISEIEKPITVQEQTLRVTTSVGITF 813 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + L+ + A + + +LN + A+++G+ Sbjct: 814 YPDDAIDSGMLIQNADRAMYAAKDMG-GSAFKFYTTELELSWLSRTFILNELEAAIEKGE 872 Query: 504 LLLYAQPIRNKEGE----GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + +Y QP+ E + ++ + G+++P FLP + + + D V + Sbjct: 873 IEVYYQPLIPANTETACQSAEALVRWQHPERGLISPADFLPQAERMGMIEKIDDFVFSQV 932 Query: 560 LKWLATHPCDKK-GPRFSVNLMPLTL--LQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + T + SVN + + + + I+ + LEITE Sbjct: 933 CQQIKTWQANGIGDVHVSVNRSAHNFGNQRGRL--DWLAYIREQGINAGLITLEITESVL 990 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 S + +++L + G +IA+DDFGTGY++ LK + D +KID F++D+ + D Sbjct: 991 MRRHAESGHLLKKLRQAGVQIAVDDFGTGYSSLSYLKEMDIDYLKIDRSFIRDLEADDND 1050 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I+ +IT +A+ + V+AE VET Q+ +L K+G +LQGY +P P+ Sbjct: 1051 RAIIEAITGMARHLGIEVIAEGVETLSQKEILEKIGCHWLQGYFFAKPMPVD 1102 >UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A017_PELCD Length = 847 Score = 627 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 108/546 (19%), Positives = 194/546 (35%), Gaps = 26/546 (4%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 L +E+ +L+ A +++ L P + + F Sbjct: 293 ALLAREQDFRSLAENAPDAIVRYDRQLRRLYINPVLERLLGQDKATLLGKPFENHAPVDM 352 Query: 260 YPFLNLTWAVSTLCLLNY-NQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRS 315 + + L + T + + + +VR Sbjct: 353 TAYQDALEKTFQTGLQQVTEVQYPLPDGTLGWFHARFEPEFAEDATVKSVMGIVRDITEL 412 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHY 367 A TD LT LPN E+ ++ A + L +D+ + ++ Sbjct: 413 VEQRELAQHLAFTDMLTGLPNRALFEKRFKEAAAEAKSTDCPFALLMLDLDHFKDVNDSL 472 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---R 424 G +R + L + E + + ++ G E ++L+ + +++ S + Sbjct: 473 GHNCGDELLRQVTARLSHCVNECDTIARMGGDEFAILLAESRGSDEAGQVADLILSTLAQ 532 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + L + F + L L + ++ ++ Sbjct: 533 PFFIESQELFISGSIGIAFFPHDSANLDELFTYADTAMYSAKHKGRN-NFQCYDQELTRH 591 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 + ++ L ++R A +L LY QP + G + +L G++TPD+F+ + Sbjct: 592 VSAKLSLGASLRYACVNHELQLYYQPKVQLKDGRVVGVEALLRWWHPVLGMLTPDRFISI 651 Query: 542 IAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L VL++ + + +VNL LQ ++A I + K Sbjct: 652 AEETGLIVEIGEWVLKTACQAAVDFNRNATAPFKVAVNLSCRQFLQNDLAATIEAILKTT 711 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + EITE + +E L G IAIDDFGTGY+ L R D++ Sbjct: 712 GCRGEWLECEITESLMIEDNPQVAKTLEALRSLGITIAIDDFGTGYSALNYLSRFPIDVL 771 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+ I T+ +V+ L + +VAE VET + A L KLG QGYL Sbjct: 772 KIDRSFINHIDTDPCKVGLVKVFIALGTNLEMQIVAEGVETVSESASLQKLGCGLAQGYL 831 Query: 721 IGRPQP 726 G+PQP Sbjct: 832 FGKPQP 837 >UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax=Enterobacteriaceae RepID=C9XYY6_CROTZ Length = 827 Score = 627 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 111/594 (18%), Positives = 212/594 (35%), Gaps = 38/594 (6%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW---------RRDIAPSLGKEKRAFTLS 218 DL+ + +LI+ M F L I + ++ E+R ++ Sbjct: 223 DLIVVILPLLIFLMCFTGLVAGIAMRNALTKARLNDENAFLLEQNRLALAASERRFRDVA 282 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + + + V + I ++ + + + Sbjct: 283 EATTDWIWETDDDLRF-TWLSERFPVITGYRIADWLGRRVTEFIQEDSATLEAWFHQPGH 341 Query: 279 --------QNFLQGVETEYSLAFILAVLISFSVC--LLYMVRIYHRSEWLNRRWHLQALT 328 +L + + + + R +L Sbjct: 342 GGHRAMTHCRYLSAQGHQRYCNLVAKPIATAEGGLSFRGTATDVTLEVEAQARVQYLSLH 401 Query: 329 DPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN +++ E +E + L +D + ++ +G + + + Sbjct: 402 DELTGLPNRVRMKEFLEGKLQSRPTREHPLAMISLDLDKFKPVNDLFGHGVGDELLHQVS 461 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGY 437 L +++ + + + G E +L++ E + L+ + + + + + +G Sbjct: 462 ARLRACLRDFDLVARQGGDEFILIIPDIERKEALEQLCERILAEINRPFSVQDHEILIGA 521 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + LL ++ + + ++ Q ++ + N++R Sbjct: 522 SMGIALAPQDAVNATDLLRFSDIALYKAKSSGRN-GWVFYDAHMAEQIVQRREMENSLRE 580 Query: 498 ALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A+ L QP + + + +L G++ PD+F+PL + L Sbjct: 581 AIRDRQFQLVYQPRYDMNAEKIVAVEALLRWHHPTLGLLMPDQFIPLAEETGLIIAISDW 640 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 VL + + D G SVN+ + + R+ ++P+ + LE+TE Sbjct: 641 VLNAACRDA---QRDMPGLAISVNISAVEFRTPGLVERVQEALNATGLAPERLELEVTEN 697 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 SN E S+ + L G R+ IDDFGTGY++ L+ D IK+D FV + + Sbjct: 698 ATLSNPEQSLELMNGLKALGVRLLIDDFGTGYSSLSYLRTFPFDGIKLDKSFVAGMPHSD 757 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV +I L KA SLS+ AE VETQ+Q A L QGYL+ RP PL Sbjct: 758 NANSIVENIIGLGKAFSLSITAEGVETQEQLAQLKMYQCDETQGYLMCRPLPLE 811 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 106/515 (20%), Positives = 208/515 (40%), Gaps = 24/515 (4%) Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + + IA ++ L P L A + N + + E Sbjct: 161 IAAVRSQGLIIAAVAGSGGILLALFISHSLTVPLNQLIKATHRITTGNLSYRIHLKNKDE 220 Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--- 345 + F+LA + L + + N + D LT L N + Q E Sbjct: 221 F---FLLAKEFNQMSDWLE--ETLKKYQENNAKLQHDLFHDNLTGLANRVYILQEIEAEI 275 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 Q+ + L D + ++ G + + +I + L +++++ +L G Sbjct: 276 KEKKANQDHCFAVLFLDCDRFKVINDSLGHDVGDEVLINIAQRLNLCIRKHDIAARLGGD 335 Query: 400 ELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++++ ++ + + + S + N L + N E LL Sbjct: 336 EFVILIKNLSDIKQVTQIADRILKQMSEPLILENQQLVITMSIGVVVSQENYENADDLLR 395 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 + + ++ Q +++ + +++R AL++ + LY QPI + Sbjct: 396 DADITMYHAKQQGKAQ-YAIFKPIMHTQALERLEVESSLRKALEKQEFYLYYQPIISFKT 454 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-- 571 + G++ +L G ++P F+P+ + L VL+ ++ Sbjct: 455 SQLIGFEALLRWHHPTQGWISPATFIPIAEETGLIVSLGQWVLQEACHQISIWQSHFPFS 514 Query: 572 -GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + SVN+ L Q + ++ ++ + I + LEITE +N ES+ + ++ L Sbjct: 515 EPLKVSVNISSFQLNQMDFVEQVKKVLEESKIKASQLNLEITETVIMNNIESTSFKLQCL 574 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 K G +I+IDDFGTGY++ L++L DI+KID FV+ + +N + I+ +I L Sbjct: 575 QKLGVKISIDDFGTGYSSLNYLQQLPIDILKIDRSFVRRLESNPSEFQIIEAIIKLGNIL 634 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + +AE +ET +Q L+ LGV Y QG++ +P Sbjct: 635 GMETLAEGIETSEQYNLIQSLGVDYAQGFIFSKPL 669 >UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPW4_9GAMM Length = 837 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 97/566 (17%), Positives = 203/566 (35%), Gaps = 21/566 (3%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-CTPYENDFIAG 241 Y+ R+ H +K ++ L + I G Sbjct: 260 MDYVYRLKELLHERDRALALSQHNLKLADKVIEASMEAIVVTDLQARIQRVNPAFTEITG 319 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + + ++ + T Y + + Sbjct: 320 YEEWEVLGKNPNLLSSGRHDALFYQKMWASLQETGTWQGEIWNKRKDGTIYPEWLTITAV 379 Query: 299 ISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + R A D LT LPN + E Sbjct: 380 EDEAGQICQYASIFSDLTEIKKSEARIKRLAYFDELTRLPNRKLFNDRLHLSLGYAQEHG 439 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ +GL +R + R + ++ E + + + G ++L+ Sbjct: 440 HKAALAFLDLDFFQRVNDRFGLDAGDQVLREVGRRIENVLCEGDTVARFGGDSFNMILTD 499 Query: 408 PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 E + + + L + I + +++ F + + L +Q Sbjct: 500 VEDDQAVSEYLTRLLEVVNQPIMVAGSDINLTVSIGVSFFPSDATDAEDLFQCAEAAVKQ 559 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEI 522 + + + + + A++ LY QP + + G + + Sbjct: 560 AKDFGRN-SYRFFSSEQHRLVQSRYRMSGDLHRAIETDQFQLYYQPKVDLQRQTVGAEAL 618 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 + + G + P +F+PL + VL ++ + ++N+ Sbjct: 619 IRWSHPELGFIPPGEFIPLAEDLGFIDQIGHYVLCEAVRQAKEWYDQGLSVQVAINVSAK 678 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + ++++A ++++ ++Y P + +E+TE + + I++L G IAIDDF Sbjct: 679 QMQRRDMAEEVLQVVEQYSCPPHLLAVELTETSFLHCLDETRATIKKLRDAGISIAIDDF 738 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTG+++ ++ + D++KID F+ +I + +D IV SI ++++A L VVAE +ET+ Sbjct: 739 GTGFSSLSYIRNIDMDVLKIDRSFLINIENSDVDRTIVSSIIEMSQAMGLQVVAEGIETE 798 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q A+L L +QGYLI RP P Sbjct: 799 TQFAMLKALNCDQIQGYLIARPMPAE 824 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 108/552 (19%), Positives = 214/552 (38%), Gaps = 26/552 (4%) Query: 203 DIAPSLGKEKRAFTL---SWLAALSVLLLL-----LCTPYENDFIAGYLVPVF---FIIF 251 D+ E+R + A +VL+L + I+GY + F Sbjct: 436 DMTERYEAEERQRLITHFFDHANDAVLILDAERQVVTLNKAVTTISGYSLDDLKGRPPRF 495 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YM 308 L + + L+ A++ + ++ + + ++ + + + ++ Sbjct: 496 MLEGYQDKVSLDELSLALNEQGVWRGEMKAVRKDGSLLPIYCNISSIRNDAGKVVNWAVF 555 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAPEQEAGKSFCCLRIDNLEFMS 364 V + R D LT LPN + + + + +D L ++ Sbjct: 556 VTDLSERKAAEARIESLTHVDQLTELPNRQGFSRIMGEWLAAARKGALILIDLDQLSRVN 615 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 +G +R I L ++++ + L +L G + ++L+ + + L Sbjct: 616 DAFGHAAGDAMLRRISVRLRKILRDGDFLGRLGGDQFGVLLAQGIRPVVAEVVARKLLDA 675 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 ++ + + + A + + LL + A + Sbjct: 676 IAQPVMIEGSDIVTTASAGICLLGSDGHDVASLLRNADNALHHAKDSGQN-AFRFFSADM 734 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + + +++ L + +R AL + +LLL+ QP + E G++ +L + G+++P F Sbjct: 735 NVRMAERLRLESDLRWALSRNELLLHYQPQVDINSGEIIGFESLLRWQHPELGMVSPVNF 794 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLF 597 +PL + L VLE + P+ +VNL + +I + + Sbjct: 795 IPLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKVVAVNLSAVQFHGADIVALVSQSL 854 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + + + LEITE + E + +++L G ++IDDFGTGY++ LKR Sbjct: 855 QNSGLEARYLELEITESVIIEDPERVIRIMDELKMLGVGLSIDDFGTGYSSLSYLKRFPI 914 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D IKID FV+D+ NT DA I+R + +A+ V+AE VET +Q L Q Sbjct: 915 DKIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVIAEGVETVEQLEFLRSHHCDEYQ 974 Query: 718 GYLIGRPQPLAD 729 G+ P + Sbjct: 975 GFYCSPGVPAGE 986 >UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alphaproteobacteria RepID=B7KRA3_METC4 Length = 954 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 122/741 (16%), Positives = 242/741 (32%), Gaps = 57/741 (7%) Query: 41 YIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCA 100 IF + + + + + + V PV + ++ + +L A Sbjct: 204 SIFATSLAIVLSGIVALLLLRQIVRPVADASTVASRIAAGELTVRVPEGGDDEFGALLRA 263 Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG-- 158 A++R + + + R Q L + I + G + + G Sbjct: 264 MAVMRDNIAAMMQEEVAQRRSAQSLLADAVQGSIEGIVVVDAGGRIVLANARAAALLGID 323 Query: 159 -------------DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA--------- 196 + ++ + T + R+ SP Sbjct: 324 QAEPGHRPLSDTRGSAVADALLAMPGHATLTAETHTADGRWLRISRSPTREGGFVAVCSD 383 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVPVFFIIFTL 253 L + + + L Y F + V + + Sbjct: 384 VSLLKEQEDQLKRSNAQLDAALSNMLQGLCLYDAEGGLLVYNRRFCDMFGVDAAALRPGM 443 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET-------EYSLAFILAVLISFSVCLL 306 + + + + + LL + LQ + L + + Sbjct: 444 SIRDVARLVEASSDSGRAIDLLVEQEALLQRGLSASLCCPIRTDCIVALKQQPTAEGGWI 503 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRI 357 + R A D LT L N + E+ AG + CL + Sbjct: 504 ATYEDVTQRYEAEARIITMARKDALTGLANRMVFGERLEEAAARLDEGAGAGFATLCLDL 563 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET----EGR 413 D + ++ G + +RS+ L +++ + + +L G E +V +G + Sbjct: 564 DRFKEVNDTLGHPIGDGLLRSVAERLQGCLRDTDLVARLGGDEFAIVQAGVQAGTHARRD 623 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + L + + + + +G + + + LL ++ A Sbjct: 624 ASALAKRLIAAFQQPFLLDGHTVTVGLSIGISLAPEHGTSPEKLLKSADLALYRAKATGR 683 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 +E + + K+ L + ++ A+ G+ L QPI + +L Sbjct: 684 G-CWAFFDEEMDVELRKRRALESDLKKAVGNGEFELVFQPIVKLDRQRIASCEALLRWRH 742 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 + G ++P F+PL + VL AT P R +VN+ Sbjct: 743 PERGYVSPADFIPLAEETGTIGEIGEWVLRKACSEAATWPS---NIRVAVNVSAAQFKNA 799 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ + + LEITE +++ +++ + L + G R+A+DDFGTG++ Sbjct: 800 AVVRAVMDALAASGLPAHRLELEITESVLLNDSVTTLATLHTLKRLGVRVAMDDFGTGFS 859 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+ D IKID FV+++ +IVRS+ L ++ ++ AE +ET+ Q Sbjct: 860 SLSYLQSFPFDKIKIDQSFVRNLAAPGNSRLIVRSVVGLGRSLGITTTAEGIETEAQLEQ 919 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G QGYL RP P A Sbjct: 920 LRLEGCDEGQGYLFSRPVPSA 940 >UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V122_9PROT Length = 995 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 109/722 (15%), Positives = 227/722 (31%), Gaps = 78/722 (10%) Query: 57 FIFGWRGVVPVLCGMFCTNLW----NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRW 112 + WR + + GM + + + V+ A + Sbjct: 291 VLAAWRYLPELRWGMVVKIDADEVFAPLYQQRRNLLGILFVLTVLGGLVAFFLGRQLVIR 350 Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 +S L + + F+ + F + L Sbjct: 351 IKRFSSTADEIARGDLSRRVEESGSDEIGTLAQNFNRMTENLQFSYRSLEGRVDERTREL 410 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 + + + AQ R E T + ++ Sbjct: 411 QVSNEQLQEEIIEREHIEKALRDAQEYLRIAATTFETHEAILITDAR-------ANIIRV 463 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 GY F + ++ + + + Y Sbjct: 464 NQAFQDTTGYCAEEVLGKNPRFLSSGCQDSAFYVEMWQQLVANGTWSGELWDRHKDGHIY 523 Query: 290 SLAFILAV---LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + ++ + + + + A D LT Q P Sbjct: 524 PKNLTITAVKNILGETTEYVSIFSDISERKRAEEEIRNLAFYDVLT---------QLPNR 574 Query: 345 ---------------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 + + L +D + ++ G + + + ++E Sbjct: 575 RLLLDRLHLALSVSARSGSYGAVLFLDMDRFKRLNDTLGHGCGDLLLIEVAERIRFCVRE 634 Query: 390 NEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 + + + G E +++L E + + + S Sbjct: 635 VDTVARFGGDEFVILLEEVGKNADEASKKAALIAEKIRAALSVPYKIKEHEYHSSPSIGV 694 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL-- 499 + GN ++ LL ++ A+ + ++ +++ L + A+ Sbjct: 695 NLYCGNGNAVEDLLKHADMAMYEAKESGRN-AVRFFDPVMQHSVSERASLEADLHRAVPD 753 Query: 500 -----------DQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 D G + +L + G+++P +F+PL + L Sbjct: 754 QQLQLYYQIQVDSNQ-----------RSLGAEALLRWIHPTRGMVSPAQFIPLAEESILI 802 Query: 549 ARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VL++ + LA + +VN+ Q++ ++ R+ + + + Sbjct: 803 LELGDWVLDAACRQLAIWSEADLMRHLTLAVNVSGKQFKQRDFVEKVARILQVHQVDASR 862 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LE+TE ++ + ++ L R+++DDFGTGY++ LK+L D IKID F Sbjct: 863 LKLELTESVVLNDVTDVISKMQALKALRVRLSMDDFGTGYSSLSYLKQLPLDQIKIDQSF 922 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V+D+ + DA++V++I D+AK L+V+AE VET+ Q+ LL +LG QGYL +P P Sbjct: 923 VRDMTFDQNDAVMVQTIIDMAKNFGLNVIAEGVETEAQKLLLEQLGCLNYQGYLFSKPLP 982 Query: 727 LA 728 +A Sbjct: 983 IA 984 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 110/560 (19%), Positives = 211/560 (37%), Gaps = 27/560 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAG--Y 242 ++S + E+R ++ +V L + + + G Sbjct: 244 VISIARDITAQNITENLLIESEQRYKSIFQYNVDAVTTLNTAGELYYSNPAAEQLFGCDR 303 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV--LIS 300 + + + + R PF + + + L + Sbjct: 304 SELIKEPFSSFIIAEEREPFHEKMTMTLEGTPHQHETAITNTRGEKRYVHLTLIPTFINK 363 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSF 352 + + + S+ + A D LT LPN +Q S Sbjct: 364 EVTGVHCIAKDITESKQSEEKISFLAYHDTLTTLPNQYKFQQDLNTLIARSSIKPKPFSI 423 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D +F++ + G + + + + L+ E+ KLY+ G E ++ E Sbjct: 424 FTIDLDRFKFINDYLGYDLGNELLTKVGTRISELLSEDAKLYRYGGDEFTIIHLDATPEE 483 Query: 413 RLQ---HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 LQ + + + S + + + + L L+ + + Sbjct: 484 SLQLGNKIASAI-SMAFDISGFDAFITVSIGISHHPDHGKDLNTLIKKSDNAMYFAKKMG 542 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARL 526 + E ++ +TK + L + + AL++ + LL+ QP + G + ++ Sbjct: 543 RN-NVQMFNEEINTLSTKNLKLESLLYKALERDEFLLHYQPQYDAKTNRISGVEALIRWD 601 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL 585 + G+++P F+PL + L V+ + + SVNL Sbjct: 602 NEELGMISPADFIPLAEETGLIVPIGEWVMRTACHQNKAWQDEGLPPMVMSVNLSIRQFY 661 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q ++ I ++ + ++P+ + LEITE A +A+S++ ++QL + G RIAIDDFGTG Sbjct: 662 QPDLPQVIGKILEESGMAPELLELEITESMAM-HADSAISILKQLKQLGVRIAIDDFGTG 720 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 +++ LK+ D +KID FV DI + + IV++I LA +L VVAE VE QQ Sbjct: 721 FSSLNHLKKFPLDHLKIDRSFVDDICLGSEEQDIVKTIIMLAHNLNLRVVAEGVENDLQQ 780 Query: 706 ALLHKLGVQYLQGYLIGRPQ 725 L QG+ +P Sbjct: 781 QFLKDHRCDVFQGFHFSKPV 800 >UniRef50_B9Z392 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z392_9NEIS Length = 709 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 110/576 (19%), Positives = 206/576 (35%), Gaps = 33/576 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--------------L 228 + + + E+ +L + + Sbjct: 124 LMHRVELALQRRSLARANLAMAQQLHTSERMHRSLVEASPDLIFTLDERFCFTFANERTH 183 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 L + + L+ + + V + + + Sbjct: 184 GLIGYSPQELLGQSLLDLVLPVDAERVRYVLEHRTGQRAIEFRIASRGGEIAERHFEASL 243 Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 +A L S L + R + R A D LT LPN Sbjct: 244 VPVAL---DLPQLSSRLYGVARDVTDKKHAEHRMAYLAYHDLLTGLPNRALFRDRLGLAI 300 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + + + +D + + +G + ++ + + L +++E + L +L G E Sbjct: 301 MQAKRKGRQVAVLFVDLDRFKLANDTFGHIKGDELLKQVGQRLQCVLRECDTLARLGGDE 360 Query: 401 LLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++L + + L + + + + F + + ++ LL Sbjct: 361 FTILLPDLSGKEDAALLAGKLVKEVAAPFSIDGDDVFLTVSIGIAVFPDDGDDIETLLRH 420 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NK 514 Q A ++ ++++ + N +R AL+ LY QP ++ Sbjct: 421 ADIAMYQVKAQGKN-GFGFFLPVMDAAASQRLRMENEVRRALELEQFELYYQPQVEFDSR 479 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP- 573 G + ++ G++ P FL +I + L V+E + L Sbjct: 480 RIIGCEALIRWPHPTRGLVPPGAFLGVIEEIGLMKPLTYWVIERACQTLREWKLAGLELS 539 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R SVN+ P L+ + +I RY I Q+ +EITE ++ ++ + L + Sbjct: 540 RMSVNVPPEVLVDDDFYDYLIATVDRYGIRRQSFEIEITENAFIADQQAMSLKLAGLAEE 599 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R+AIDDFGT Y++ L+ L +KID FV++I D+ IVR+I +A +L+ Sbjct: 600 GIRVAIDDFGTQYSSLSYLRHLPVTTLKIDQSFVREIEAGKEDSPIVRAIVAIAAGLNLN 659 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +VAE VET+ Q L LG +QGYL G+P P +D Sbjct: 660 LVAEGVETEVQADYLGSLGAVEMQGYLFGKPMPASD 695 >UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EJ7_DECAR Length = 695 Score = 626 bits (1616), Expect = e-177, Method: Composition-based stats. Identities = 103/565 (18%), Positives = 200/565 (35%), Gaps = 21/565 (3%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + +T ++ + + + + A L + Sbjct: 128 AAISGLVTSELIHRNTIDAFEGQLVEVDVLSSYIPILGKEHAVEGAFELYQNVTPFVTQL 187 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 L V + + FL + A L + E +A L Sbjct: 188 NRNLWWVTAAVVLVFAALYLMQFLVVRRAQGILEDQEGRIKAAR-DTLEIQVAARTEELK 246 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + L + + A DPLT L N R + + Sbjct: 247 RTNSQLEG---EISERRQAQSKLNYLAYHDPLTGLANRRCFIERLEESLSEGERHGEKLA 303 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + + S+ L ++ + L +L G E + ++ +E Sbjct: 304 VLYIDLDQFKQVNDSLGHGVGDELLVSVAARLSEHVRLIDMLARLGGDEFICLMEAARSE 363 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 ++ + + + + L + + ++ L+ ++ Sbjct: 364 DEVELLAREIIAAFEYPFKLGDHELFLTASVGISLCPSDGNSVLDLMRNADTAMYRAKML 423 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 ++ + +++ + N +R ALD G+L ++ QP + + G + ++ Sbjct: 424 GRG-NFHFYTAEMTREAQERIQMENLLRRALDNGELSVHLQPQVDSRSGQLVGAEALVRW 482 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTL 584 + G + P +F+PL L VL + SVNL L Sbjct: 483 NSPELGQVMPIRFIPLAEDSGLIIGLGNWVLRETCRQFMQWRMSGFELPQVSVNLSVKQL 542 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + ++ + P + LE+TE + + +E+L G +A+DDFGT Sbjct: 543 ERPEFIDVLDKILDETGMDPTLLKLELTESVVMA-VGDAFTPLERLRDLGISLALDDFGT 601 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK L +KID FV+ I N+ D I+R+I +LA++ VVAE VET +Q Sbjct: 602 GYSSLSYLKMLPVQQLKIDRSFVEGIGRNSGDEAIIRTIMELARSLGFEVVAEGVETVEQ 661 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L LG + LQG+L G+ + Sbjct: 662 ANFLADLGCEQLQGFLHGQAVSPVE 686 >UniRef50_B3E7G7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E7G7_GEOLS Length = 860 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 106/591 (17%), Positives = 198/591 (33%), Gaps = 21/591 (3%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 + L + +F L R V A + + L Sbjct: 255 AGYLMPRWIWWTLGGVAGGALLLGIFALLLRREVRRKTADLNHEVEERRKLFAAVEQSAN 314 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 S + + ++ P+ V + + +L +S Sbjct: 315 SVVITDTEGVIEYVNPHFCMVTGYRSEEVIGQKPSLLKSGHQSAELYADLWKTISAGREW 374 Query: 276 NYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + + Y +A + + + + QA D LT Sbjct: 375 RGEFRNKRKNGSLYWDLCSIAPIRNEAGEITNFVAIKEDITSRKAQEEILTWQAGHDTLT 434 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 L N LE Q S + IDNL+F++ +G + I L Sbjct: 435 GLYNRYFLENHLTAEIKRMDRQHQTLSLLLIDIDNLKFVNDTFGHDFGDRLLVQIAERLK 494 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 + + G+E LV E +VN + S + + + Sbjct: 495 QAACPLSIVGRFLGNEFALVPPLAEGREHAVTLVNRIKQQMSELFVMDGAEVVITVSIGV 554 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + E LL ++ + + +++L + A + Sbjct: 555 VVFPDDGEDADTLLRNAEAAMYEAKRQGRN-TIVWYTTDFHKRAQYRLMLAARLHRAFEN 613 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 D L QP + G + +L D ++P +F+P++ + L VL Sbjct: 614 SDFTLQYQPQISTQDNTVIGVEALLRWTPADLPPVSPMEFIPILEETGLIVPVGTWVLYQ 673 Query: 559 LLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 A R SVN+ + + ++ + + + P + LE+TE Sbjct: 674 ACHQAAAWQRAGLPRMRLSVNISAVQFQRGDLGETVRMVLAETGLDPALLCLELTESMLM 733 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 + S +++L G R+A+DDFGTGY++ L RL +K+D FV+ + D Sbjct: 734 IDTAQSQQKLQELRDLGVRLALDDFGTGYSSLAYLSRLPVQELKVDQSFVRRLHDTPSDT 793 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +V ++ +A+ L+++AE VE+++Q++ L G +QG+L RP P Sbjct: 794 AVVNTVIAMAQELGLTLIAEGVESEEQKSHLIGRGCTIIQGFLFCRPLPPD 844 >UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6G1_9GAMM Length = 702 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 85/471 (18%), Positives = 186/471 (39%), Gaps = 23/471 (4%) Query: 277 YNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + ++ + ++ + +L ++R + + + QA D LT LP Sbjct: 210 FERTHTHIKGYDFPVEISISYIEFEEKTYVLAVMRDISQRKADEKLIWQQANYDHLTGLP 269 Query: 336 NFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R L EQ + + L +D + ++ +G ++ + + L + Sbjct: 270 NRRLLLDRLEQLIHRIHHTNSSLALFYLDLDRFKEVNDKFGHAKGDLLLQDVAKRLTQCV 329 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRL-----QHMVNILNS---RQIHWNNTGLDMGYGA 439 ++++ + +L G E ++++ E E + + + + + R +N + + Sbjct: 330 RKSDTVARLGGDEFTIIIAELEDEDKANKITVERIAQAILNALNRPFKLDNEQVYISASI 389 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + LL + + + ++ L+ + A+ Sbjct: 390 GITFYPEDANFSDVLLNAADQAMYAAKKQGKN-CFQYFSFSMQEEALSRLQLVKELHLAI 448 Query: 500 DQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 ++ + L QPI + + ++ G++ P++F+P + L V Sbjct: 449 EKQEFHLVYQPIIALKTGLISKAEALIRWQHPTRGLVYPNEFIPTAEETGLICEIGDWVF 508 Query: 557 ESLLKWLATHP-CDKKGPRFSVNLMPLT-LLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 + + + +A + ++N P+ L G + Y + +A+ +EITE Sbjct: 509 KQVAQQVAKWRIKLDPNFQLNINTSPIEYLKSNAFLGNWVEYLNAYSVPGEALAIEITER 568 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + + G +A+DDFG GY++ +K+ D +KID FVK+I T+ Sbjct: 569 ILMDSHSFIPKKLVNFQSLGIDVALDDFGMGYSSLSYIKKFDIDFLKIDRSFVKNITTSV 628 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 D ++ +I +A + VVAE +ET+ Q+ L +G Y QG+L P Sbjct: 629 NDKIVCEAIVAMAHKLGIKVVAEGIETEAQRRCLKDIGCDYGQGFLFSVPL 679 >UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IZR7_NOSP7 Length = 664 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 163/441 (36%), Gaps = 20/441 (4%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRID 358 ++ + + A D LT L N A + + +D Sbjct: 214 LLTEITERKRAESQLLHLAFYDILTGLANRAAFMNRLSHAINYSKRHSNYLFAVLFIDLD 273 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + + + L ++ + +L G E ++L G + + + Sbjct: 274 RFKVINDSLGHLNGDQLLLATASRLQVCVRSIDTAARLGGDEFTILLEGIQDVSDVITVA 333 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + + + + + +L Q+ Sbjct: 334 ERIQQELALPFELEGQEVFITASIGIALSSTLDYKHPEEVLRDADTAMYQAKVQGRAR-Y 392 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + ++ L +R A+++ + +Y QPI + G++ +L + G Sbjct: 393 KLFNSDMYANALAKLQLETDLRRAIERLEFRVYYQPIVSLTKGSILGFEALLRWQHPERG 452 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKN 588 ++ P F+ L + L VL + + + SVNL Q + Sbjct: 453 LLNPADFISLAEETGLIFSIGKWVLHEACRQMQAWRMCHDSNLLEKISVNLSLKQFSQPD 512 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + +I ++ + + LEITE +N + QL + G +++IDDFGTGY++ Sbjct: 513 LIEQIGQILHSTGLDADTLTLEITESVIVANGDKVTATFLQLREMGIKLSIDDFGTGYSS 572 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 RL ++KID F+ + N + I+ I LA + V+AE VET++Q A L Sbjct: 573 LSRLYNFPISVLKIDRSFISLMSANKKNLEIIEIIATLAHKLGVDVLAEGVETKEQLAFL 632 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 KL +Y QG+ P ++ Sbjct: 633 RKLKCEYGQGHFFSVPLNSSE 653 >UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30T73_SULDN Length = 707 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 106/474 (22%), Positives = 191/474 (40%), Gaps = 20/474 (4%) Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 L + + Y++ + + V + M R ++ + H A D Sbjct: 230 LWRDELWDRKKDGSLYAIEQTIICVRDKNQDIVNYIGMSRDITEAKNKEEKIHQLAFYDF 289 Query: 331 LTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN + +Q E + L +DN ++++ G + + I Sbjct: 290 LTKLPNAKLFQQEVEAYIKSTHYNNETFAILFLDLDNFKWVNDSLGHQIGDLLLIEIAAK 349 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGA 439 L ++ ++ + +L G E +++ E + + N + I N +++ + Sbjct: 350 LKEIISQDSIISRLGGDEFVILAP-YENLLTISQLANTILCSVKDPIKVQNREVNVSWSI 408 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + N E LL +S +M++ ++ L +R A+ Sbjct: 409 GISLYPQNGENYNDLLKNADAAMYESKNRGKN-TFRYFNDMMNQDAMYRLELDTKLRYAI 467 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 L QP + + G + ++ + D G + PDKF+P+ + + V+ Sbjct: 468 TNNSFFLNYQPKYSFEHGKTIGVEALIRWIDKDLGFIAPDKFIPIAEESSYINEIGSWVM 527 Query: 557 ESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + L L S+N+ L ++ L K I P V EITE Sbjct: 528 KQALNDLKIINSKLSSPISISINVSGKQLEHESFYDEARTLLKESGIEPSLVEFEITETS 587 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N + + ++++ G +I+IDDFGTGY++ LK+L D +KID F+K++ + Sbjct: 588 IMQNIDHVVDILKKIKMLGVKISIDDFGTGYSSMSYLKKLPIDTLKIDREFIKELEIDED 647 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV +I LAK+ L+ VAE VE ++Q+ +L L QGYL RP L D Sbjct: 648 SKSIVNAIIALAKSFKLTTVAEGVENEEQKLILDGLNCDMTQGYLYSRPLSLDD 701 >UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEH3_9GAMM Length = 700 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 116/615 (18%), Positives = 231/615 (37%), Gaps = 23/615 (3%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT----AVLIYNMLFYYLTRMI 190 L S D P I++ A+ +++ + A+ R Sbjct: 65 AAAALSTLKASGIDLPFIIASGAVTAEDAVSLLKEGAHDFMDKGALARLVPAIERELREA 124 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + + S E+ ++ + + + + + + Sbjct: 125 DVREQRRQAEAQVEVLSQALEQCPASVVITSPDGNIEYVNSYFEKASGYSASDAKGRSLG 184 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLY 307 FTL + + L+ V+ + ++ + + L++ + Sbjct: 185 FTLQKEEHEHLMSELSQLVTEGQRWSGEMRSIRADGEMFWEYVKASPLMNEDKSVSHYIV 244 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + ++ QA D LT L N L + + + + + +D+ Sbjct: 245 VKEDITVQRDYEQQLLRQAHYDDLTGLANRVLLVEKLTQALQNAQQNNSQLAVLGIDLDD 304 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ + L ++ + + ++ G E +LVL + M Sbjct: 305 FKNVNDSVGHSIGDTLLKQAAQRLSSCIRSGDIVARMGGDEFVLVLPLLSDAKNAELMAQ 364 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + S+ + + + + +L QS Sbjct: 365 RIVQKFSKPFNIAGRQYSVTCSIGISVYPDDTSDAHMMLRNADLAMYQSKDQGRDQ-YQF 423 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIM 533 E ++ + +++ L +R +D G+L L QPI N + G++ ++ + DG ++ Sbjct: 424 FTEDINRRLVERLDLEEKLRNVVDNGELALQYQPIFNLETQKIAGFEALVRWPQADGSVI 483 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGR 592 PD F+P + + D VL S + A ++N+ PL L Sbjct: 484 MPDSFIPAAENIGVIQKIDEWVLASACRETAPFLLSGDDNLCLAINISPLQLEDPGYVAF 543 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 ++ + + P+ + LEITE S+AE++ NI+ L + G R+++DDFGTGY++ L Sbjct: 544 VMAQLEANQLEPRHLELEITERVLVSDAETTDRNIKALTELGIRMSVDDFGTGYSSLGYL 603 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KR +KID FV D+ + +V +I +AK + V+AE +ET+ QQ LLH+LG Sbjct: 604 KRYPLHTLKIDRSFVADMDVDDSARRLVETIILMAKGLQMDVIAEGIETESQQVLLHELG 663 Query: 713 VQYLQGYLIGRPQPL 727 QGY + RP L Sbjct: 664 CSQAQGYFLSRPVSL 678 >UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococcus capsulatus RepID=Q60BK5_METCA Length = 594 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 101/528 (19%), Positives = 196/528 (37%), Gaps = 35/528 (6%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPF-LNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + + PV I V + +P+ +L S ++ ++ + L+ Sbjct: 59 SAAAVVDDAMRPVGLIDRYSLVEQFLHPYSRDLYHKHSIAAFMDPEPVIVEADSSIDDLS 118 Query: 293 FILAV----------LISFSVCLLYM------VRIYHRSEWLNRRWHLQALTDPLTLLPN 336 I+ +++ L + + + A DPLT LPN Sbjct: 119 RIIIDAGMRHMVSGFIVTEDGLYLGIGSGHDLFEEVANRKQN--HLYHLAHYDPLTSLPN 176 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L + + +D + ++ G ++ + ++ Sbjct: 177 RLLLNDRLKRACLRGQRGGYRIALLFIDLDRFKLVNDTLGHAAGDQLLQGVAGRFAACVR 236 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFD 445 + + + +L G E ++L + + L R N + F Sbjct: 237 KVDTVARLGGDEFTVLLEPVQGPDEALAVAAKLAQSLERPFLIQNHEITTSASIGVVLFP 296 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + T++ L+ + + E ++ ++V L + + AL++G+ Sbjct: 297 EHDATVEGLMRKADAAMYCAKREGRNR-FALFTEEMNSTVVERVTLESYLNAALEKGEFC 355 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 + QP + G + +L G + P KF+P+ L L LE+ Sbjct: 356 CHFQPQMATADDRIVGVEALLRWTNPVLGRVPPLKFIPVAEDTGLILPLGLWALETACAQ 415 Query: 563 LATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 R +VN+ PL + ++ + +R I + + LE+TE ++AE Sbjct: 416 QVRWLSQGLPPLRMAVNISPLQFRNREFCDQVRAIVQRTGIRAEHLELELTESAVMADAE 475 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 SS+ + +L G R+AIDDFGTGY++ L++ D +KID FV I + +IV+ Sbjct: 476 SSVGILRELRDSGIRLAIDDFGTGYSSLSYLRKFPLDRLKIDRSFVSGIDRIPANELIVK 535 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I L + L V+AE VET ++ + + G QG+ + P D Sbjct: 536 AIVALGGSLGLDVIAEGVETPEELECIERCGCSEYQGFRLSEPLTAED 583 >UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IP89_XANP2 Length = 758 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 109/563 (19%), Positives = 200/563 (35%), Gaps = 21/563 (3%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 +TR++ + + L A L + ++ I GY Sbjct: 175 GAVTRVVGMITDVTAQKQSERHLRLAAAVFASAHDGLVVTDLNAVVSAVNPAFSQITGYC 234 Query: 244 VP--VFFIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + T+ G+ F W A+++ + + + + + Sbjct: 235 EAEILGRSMRTMHSGRHDREFYRGMWGALTSTGSWHGEIWNRRKNGEIFLQQLSIRTVFD 294 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQEAGKSF 352 + + R + A DPLT LPN L + Sbjct: 295 EKGKPQNYVGAFQDITRIKHSEFELDRIAHYDPLTDLPNRTLLASLLDLAVSRAGKTCAV 354 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L ID + ++ G + +++ + + + L E +++L E Sbjct: 355 LFLDIDRFKTVNDSLGHIAGDAVLKAAADRIRAALDADATLGHYGADEFVVILEEIEGPQ 414 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + L +R N + +G + + LL + ++ A Sbjct: 415 DAALAASRLIDELARPFTINGGEIYLGASVGISLHPLDADDAAQLLQHANTALAEAKAQG 474 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + ++ ++ + +R L + + L QP+ + G + ++ Sbjct: 475 RG-IYSFYTQALTRSARVRMEMEADLRRGLVREEFRLNFQPVVDLANGRIAGAEALVRWQ 533 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLL 585 G++ P++F+PL + L VLE + +A +VNL P Sbjct: 534 SPVHGLVLPNRFIPLAEETGLIEPLGDWVLEEACQQMAKWTAAGADLDFIAVNLSPRQFQ 593 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + + RI + +R + + +EITE F + + + G RIA+DDFGTG Sbjct: 594 RGTLCERIEEVLRRTGLPAARLEVEITENVLFGAVA-AERKLRDMRDSGVRIALDDFGTG 652 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR +KID FV D+ DA I +I +A+A L VVAE +E +Q Sbjct: 653 YSSLAYLKRFPISKLKIDRSFVHDLPR-AADAEIATAIISIARALGLDVVAEGIEAPEQC 711 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 A L + G + QGYL GRP Sbjct: 712 AFLKERGCGFGQGYLFGRPVTSE 734 Score = 45.8 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 30/148 (20%), Gaps = 19/148 (12%) Query: 206 PSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 E+R + + V L +P D + I T Sbjct: 69 ALRESEERFDLAARGSDQGVFDIHVGRSLYLSPRARDILGIAPKAPVDIRRTFRQMLRGA 128 Query: 261 PFLNLTWAVSTLCLL----NYNQNFLQGVE---TEYSLAFILAVLISFSVCLLYMVRIYH 313 + L + + + ++ M+ Sbjct: 129 DRRKVAAVRKDLVRGGSDVDLDIRISRPDGASRDVRWRGLATRDGDGAVTRVVGMITDVT 188 Query: 314 RSEWLNRRWHLQA-----LTDPL--TLL 334 + R L A D L T L Sbjct: 189 AQKQSERHLRLAAAVFASAHDGLVVTDL 216 >UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZY8_9NEIS Length = 718 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 96/562 (17%), Positives = 185/562 (32%), Gaps = 33/562 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFFIIFTL 253 R+ + L V L C +I + Sbjct: 148 RRQAEHAVEEQLNFTSQLIETIPSPVFYKDEAGRYLGCNEAFEHYIGLPREELIGKSVFD 207 Query: 254 GVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYM 308 + + Y T ++ F A L+ + Sbjct: 208 ISPRHLAERYHAADQALFDAPGTQTYEAEVQSTDGTLKNVVFYKATFNKSGGQLGGLVGV 267 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNL 360 + + + QA D LT LPN R + +Q + + + +D Sbjct: 268 ILDITDRKRSEKTIWHQANYDLLTELPNRRLFLERLQQGIEHAKGSGSALALMFIDLDRF 327 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + + + ++E + +L G E ++L ++ + Sbjct: 328 KEVNDMLGHKVGDQLLSQAGQRIADCVRETGLVARLGGDEFTVILENLSQPTPIEQVAQS 387 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + S+ + + + + + LL + A Sbjct: 388 IIETLSKPFQLGPDVAYVSASIGVTLYPKDAQDMDTLLINADQAMYHAKALGKNR-FCYF 446 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + +++ L + +R+A+ QG L +Y QPI + + ++ G ++ Sbjct: 447 VPSIQAIFAERLQLGHDLRSAMAQGQLDVYYQPIVDLATGHIVKAEALVRWHHPRRGWIS 506 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPC------DKKGPRFSVNLMPLTLLQK 587 P +F+P+ L V + S+N P Sbjct: 507 PAQFIPIAEDIGLINGIGDWVFRRAAGMAKRLWESGCSGTPAGAPLQISINKSPRQFFTG 566 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I + + + + +EITE ++Q + G ++++DDFGTGY+ Sbjct: 567 HAHETWIDHLQEIGLPAECIAIEITEGLLLDERPDVTSKLQQFRRAGVQVSLDDFGTGYS 626 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 LKRL D +KID FV+D+ + D I +I ++ L VVAE VET++Q+ L Sbjct: 627 AMAYLKRLDIDYLKIDQSFVRDMTSTPSDRAITEAIIAMSHKLGLRVVAEGVETREQRDL 686 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G + QGY R P + Sbjct: 687 LSAAGCDFGQGYWFSRALPEDE 708 >UniRef50_Q1Q7M3 Similar to ScrC (Sensory box/GGDEF family protein) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7M3_9BACT Length = 736 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 82/440 (18%), Positives = 167/440 (37%), Gaps = 16/440 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCL 355 + + + H QA D LT LPN + E+ + + + L Sbjct: 276 GVYAIAHDITERKEAKEYIHFQACHDLLTKLPNRTSFEKRGRLAISKARQNDCIVAVLFL 335 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + ++S+ + L +++ + L + E +L+L + Sbjct: 336 DLDRFKIINDSLGHAVGDQLLQSVTQRLESCLRKCDILSRFGADEFMLLLPEINAPENAR 395 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + F + ET++ L+ Q+ Sbjct: 396 QVALKITDIMHTPFVIGDQEIFGDVSIGISFFPEHGETIEQLIQNAEIAMYQAKCRGK-K 454 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + ++ + ++ + +R AL + + QP + G++ ++ + Sbjct: 455 GIQFFDKGMKTSGPHRLAMERDLRRALKNNEFEIVYQPQITINTGKVIGFEALVRWNHPE 514 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN 588 G + P +F+P+ + L VL + R S+N+ PL + + Sbjct: 515 KGKIRPSEFIPVAEETRLIEDLGEWVLHHACCEVREWIKKGHDTIRLSINISPLQIENPH 574 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + +E+TE ++ E + LHK +AIDDFG GY++ Sbjct: 575 FVENFVHMLGICQFPGKNMEIELTESILMTDLEHMAQILNHLHKHSITVAIDDFGIGYSS 634 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 +++L +KID F++ I T ++ +V +I + K L VAE VET Q L Sbjct: 635 LSYIQKLPIHTLKIDQSFMQSIQNETDESCLVNAIIAMGKGLHLCTVAEGVETMTQIKYL 694 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 G +QGY G P+ Sbjct: 695 QNQGCDAVQGYYFGEPRSGE 714 >UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG75_THIDA Length = 954 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 111/568 (19%), Positives = 203/568 (35%), Gaps = 32/568 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFT-LSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + S + D A + + ++ + Sbjct: 371 LASRQLGETKDSLDRAQRIAQMGNWDWYIAENRLFWSEGIYRLFGLRQGQFEASYEAFLV 430 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI---LAVLISFSVCL 305 ++ + + L + ++ + + L + + Sbjct: 431 RVYPSDRAAVDAAVQRALNTGAPYAL---DHRIVRPDGSVRVVHETGEVLLDALGKPSRM 487 Query: 306 LYMVRIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQAPE--------QEAGK 350 + V+ + A DPLT LPN L Sbjct: 488 IGTVQDVTHWREAEQALREKDAHLEHVAYHDPLTDLPNRALLLDRLRAAVSRNGRTGGRL 547 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G + +++ L L ++ + L +L G E +L+L G Sbjct: 548 AVVFIDLDRFKTINDSLGHAVGDAVLQAAASRLRSLTRDGDTLARLGGDEFVLLLDGLRD 607 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + R +H + L + + + + LL +S Sbjct: 608 NAAAGAVAEKIITALERMLHVGSYPLHISASIGISLYPEDGRDAEALLRHADAAMYKSKE 667 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 E ++ + +++ L + +R A D L ++ QP+ G + +L Sbjct: 668 RGRN-TFHFYEHGITERAMRRLQLESRLRRAFDDRTLQVHYQPLVRLDTGHICGAEALLR 726 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMP 581 + G + PD F+ L L V+ + L + VNL Sbjct: 727 WNDPEAGAIPPDHFIALAEDTGLIVPIGEWVVGEACEALKRWETEILLPADFALHVNLSG 786 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 LLQK++ R+ F R +SP V+LE+TE + + + + L +FG IAIDD Sbjct: 787 KQLLQKDLPTRLSDAFTRAGVSPARVVLELTESSIMESEATGVAVMTALREFGVEIAIDD 846 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG+++ RLK L +KID F++DI ++ DA IV++I L+ L V+AE VE Sbjct: 847 FGTGHSSLSRLKLLPISELKIDRSFIRDIAVDSDDAAIVQAILALSAKLGLGVIAEGVEH 906 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q+A L + G QGY RP P + Sbjct: 907 AEQEAFLMQHGCLRAQGYRYARPMPEDE 934 >UniRef50_Q8DHT6 Tll1859 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DHT6_THEEB Length = 712 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 99/562 (17%), Positives = 194/562 (34%), Gaps = 36/562 (6%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-------------YENDFIAGYLVPV 246 + A L R L+ + L T Y++D I ++ Sbjct: 142 MKLTQAALLETSDRYALLTRSINDGIWDWNLTTNETFYSSRWKSILGYQDDEIGNHIDDW 201 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISFSV 303 I +++ + + + +L + + Sbjct: 202 LKRIHPQDGDRVK--LNLMLHIRGQTPHFHQEFRIQHRNGAYRWVLARGLVLRDVHGNAT 259 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCC 354 + + + L D LT L N L EQ A + Sbjct: 260 RVAGSLTDLTEHRLGEAQLLHDGLHDWLTGLANRTLLFDRIEQAARHGRRRPDYKLAILF 319 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + ID + ++ G + + L +++ ++ + ++ G E +++L Sbjct: 320 IDIDRFKVINDSLGHSSGDLILIELANRLTRIVRADDTVARIGGDEFVILLDDISDNNDA 379 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + N+ + + + E + L ++ Sbjct: 380 LAVCDRIHSELDKPFVVNDQPIALRVSIGVALRSAHIEKAENYLRNADIAMYRAKLAGGN 439 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 E + ++ L +R A+++ + L QPI + G++ ++ Sbjct: 440 R-YQVFSEDMHLMARDRLSLEIGLRQAIERDEFTLLYQPIYRLRDNALYGFEALIRWQHP 498 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLLQ 586 G + PD+F+PL + L V+ + L +VNL L+ Sbjct: 499 TQGFLLPDRFIPLAEETGLILPIGDWVIWRACRDLQYWHEQFPQCQLSVNVNLSNRQLMH 558 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + +++ ++ I P + LE+TE + + +L G ++++DDFGTGY Sbjct: 559 PALPEQVLAALEQTQIPPHCLHLEMTESVGIDQPDQVRETLCKLKAQGIKLSLDDFGTGY 618 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L L DI+K+D FVK I +++ +I LAK +L VVAE VE Q Sbjct: 619 SSLRYLTHLPIDILKVDRSFVKLITETEQRPLVIDAIVSLAKGLALEVVAEGVEHPYQVT 678 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L +LG Y+QGY RP Sbjct: 679 RLRELGCDYVQGYYFSRPLTTE 700 >UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=A8H0J8_SHEPA Length = 839 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 90/558 (16%), Positives = 185/558 (33%), Gaps = 20/558 (3%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + + + S E + ++ E + Sbjct: 272 RNIASHKAAKDQLELASRVFENSVEGVIITDVDGAIIDAHGAYSEITGYTKEELLGQNPR 331 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLY 307 + F + + + + + + ++ + + Sbjct: 332 VLNSGRHKKAFFTEMWNDLLSKGKWHGEIWNRRKSGAIFPQMLNISAVYDIEHQIRFFVA 391 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDN 359 + + A DPLT LPN AL EQ + +D Sbjct: 392 VFNDISAQKQSEAELAKVAFHDPLTKLPNRMALNTGLEQELKQASHSNTRLGLVYIDVDL 451 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV- 418 + ++ YG + + + R + + +L E L+L ++ L + Sbjct: 452 FKQINESYGHPVGDEVLLEVSRRFSQSLGDLVTAARLGSDEFALLLPNIDSNDALLQQIN 511 Query: 419 --NILNSRQIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + + + LL ++ Sbjct: 512 NLRKVFDQPFILGEHGQARLTSSMGVAIYPDDAQDPSGLLVNAEIAMHRAKQDGRNNC-A 570 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGI 532 E ++ ++ ++ L + + A++ L L QP + G++ +L G Sbjct: 571 FYTESLNQESVAKLKLQSALHDAIELNALYLVYQPKISFVTGDVVGFEALLRWDDPAFGA 630 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAG 591 ++P F+PL + L VL+ + R +VN+ + + + Sbjct: 631 VSPAVFIPLAEKIGLIQDIGRWVLKRACEQGQRWREQGVNFGRIAVNVAGQQIQRSSFVD 690 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + K+ + + LE+TE S E ++ +L G ++IDDFGTGY++ Sbjct: 691 EVAETLKQTGLPASCLELEVTESYMMSEPELVSQDLAKLGLMGVELSIDDFGTGYSSLSY 750 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK+L +KID F+ + +T + I ++I + A +L VVAE VETQ Q L Sbjct: 751 LKKLPIHKLKIDQSFIAGLPLDTHNTAIAKAIIAMGHALNLKVVAEGVETQAQADFLKDN 810 Query: 712 GVQYLQGYLIGRPQPLAD 729 + QGY +P+ + + Sbjct: 811 LCDHAQGYFYSKPKLVEE 828 >UniRef50_A4X020 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4X020_RHOS5 Length = 875 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 128/746 (17%), Positives = 244/746 (32%), Gaps = 47/746 (6%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLA---WMPLCVMLSILFIF---GWRGV 64 + I+ F + L+ S L ++ +L W + + IF G R Sbjct: 137 LLIYCALFIACLFLLHFDIKHSVLGPAQTAVAYLYPALWFSVLAFGILSLIFFDHGKRSF 196 Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 L + +++ + + + L + Sbjct: 197 PLFLLVIGIAAEAVADFWYVRAIMNGTYTPGGMTLLLWLSTTGLVALAAAEHLALIRRAG 256 Query: 125 LFWLGLV----TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 L L I +V + F +S FG +L L A + Sbjct: 257 LTQSALRRRTDAGIAQAALPGIVIAIFMLSGSLSGAFGRNWEYVAFSSVLGLIFAAVAAL 316 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP------- 233 + +I S + +R + + +V++ Sbjct: 317 REYA----VIRSHEALRTEAEESREEVSLSRRRLAAVLESTSDAVVVFDRSMRVEYFNEN 372 Query: 234 --YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + + + F + A S + Y+ L Sbjct: 373 AVSALEGVGAPGLGASF-TEIFPETSFPGALVRFRSAQSRQEPMEYDALLSGPD---RWL 428 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----E 347 + R R A DP+T L N + ++ E Sbjct: 429 SINGYPSNGGLSIF---FRDVTEQRTARERMAHLAHHDPMTGLANRMKFSEELQRCVSLE 485 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 S + +DN + M+ G + + I R L LM+ +L G E +++ G Sbjct: 486 TPVSVLLIDLDNFKDMNDTLGHPLGDAVLVEIGRRLQQLMRPGNLAARLGGDEFAMLIFG 545 Query: 408 PETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + L + + +R I N + + + L+ + Sbjct: 546 QQDRIALGAIAERVLARISAPIALPNQTVRVTASMGIAM--DDVANRAELVRTADIALYE 603 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + + + + + ++ ++ + AL + +++ QP+ + G++ Sbjct: 604 AKRDNRG-TYRFFDGAMEIRLRERTAIIADLTAALGNNEFVVHYQPLYELASHRICGFEA 662 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 +L G+++P+ F+P+ L + VL + A P R +VNL P Sbjct: 663 LLRWTHPVRGLVSPEVFIPIAEDTGLIHQIGAWVLRTACTAAADWPA---DVRIAVNLSP 719 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + R+ + + P + LE+TE ++ S++ QL++ G RIA+DD Sbjct: 720 RQFRDLGLPTMVARVLEETGLRPNRLELEVTEAALLDDSGSNLDIFAQLNRMGIRIALDD 779 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY+ L++ +KID F+ + + IV +I +A A S+ V AE VET Sbjct: 780 FGTGYSALSYLQKFPFAKLKIDRSFITGLPDSESSMAIVSAICSMAHALSIRVTAEGVET 839 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPL 727 + Q L +QGYLI RP P Sbjct: 840 RDQFDWLQTR-CNEIQGYLISRPVPA 864 >UniRef50_D2UCH8 Hypothetical two-component system sensor protein n=1 Tax=Xanthomonas albilineans RepID=D2UCH8_XANAL Length = 716 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 102/608 (16%), Positives = 187/608 (30%), Gaps = 28/608 (4%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + GD + V + + R I S A + Sbjct: 104 HLEGLTAIYLAEYRVDLTGDGVWRWARVRGRVVDYDAVGNPRRLAGTARDITSHRQADLE 163 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 R + L + I GY + Sbjct: 164 RRIAAEVLRSMSEAVAVLDE------ERRFISVNPAFTRITGYSEREVLGQPMTLIDHAP 217 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRIYHRSE 316 + + E + + ++ + Sbjct: 218 NVPPPPMLDQGR--HWRGDAWKRRKDGHEILCHMRRNTVVDADGRQSFQVVVLEDITEQK 275 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + A D LT LPN L + Q + L +D + ++ G Sbjct: 276 RAEQELRYLANYDTLTSLPNRALLSERLARAIVRARRQAGAVAVLFLDLDRFKDINDSQG 335 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + +R++ L + + +L G E +V+ ++ + + + + Sbjct: 336 HPVGDQVLRAVAERLQQAVGPQHTVARLAGDEFTVVVEDIVSQDEAESVAARVLAAFEPP 395 Query: 426 IHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + ++ + + F + LL Q+ A + Sbjct: 396 LRLDDRREVAVSTSIGISLFPQHALLPSELLKHADTAMYQAKAAGR-RNAQVYSASMDEA 454 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 T + L +T+R +L L QP + + +L D G ++P +F+PL Sbjct: 455 TRHRATLASTLRKIPLDQELKLVYQPRYSLREQRVVSVEALLRWHSADFGPVSPSQFIPL 514 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L + VL L S+N+ + L + N+ + ++ Sbjct: 515 AEETGLILQIGEWVLRQACSALRDWRQMGLTDLCMSINVSAIQLERSNLPELMAQILAET 574 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + V LE+TE S S + + G +AIDDFGTGY++ LKRL + + Sbjct: 575 GVPAANVELELTESVVMSQVGKSAEILHACRELGLTLAIDDFGTGYSSLAYLKRLPINTL 634 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+ D+ + DA I +I + + L VVAE VE Q L + G +QG+L Sbjct: 635 KIDQAFISDLSLDPDDASITSTIIAMGHSLDLKVVAEGVEQPSQLMFLREHGCDEIQGHL 694 Query: 721 IGRPQPLA 728 + Sbjct: 695 VAPALEPD 702 >UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Proteobacteria RepID=Q21RL1_RHOFD Length = 853 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 111/563 (19%), Positives = 195/563 (34%), Gaps = 49/563 (8%) Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTPYEND-----------FIAGYLVPVFFIIFTL 253 E R T+ + + + Y+ Sbjct: 298 RHLRASEDRLATILNSVDAYIYIKDMELRYQYANRKVCELFDRPLAQVVGSTDSEFFDAT 357 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY-SLAFILAVLISFSVCLLYMVRIY 312 V +LR + + +++ E Y S+ L L + Sbjct: 358 TVERLRINDKRVIDNGERVEADEVSRSLDGSREQTYLSIKLPLRQPDGSIYALCGISTDI 417 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 + H A DPLTLLPN R L + Q+ + + +DN + ++ Sbjct: 418 TEHKRSEDAIHQLAFYDPLTLLPNRRFLMERLQQTLKANERQQQCGALLFIDVDNFKDLN 477 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ-----HMVN 419 G M +R + L + + L + E +L+L + H+ Sbjct: 478 DTLGHAMGDELLRQMAVRLSTCTRAEDTLARQGSDEFVLLLCDLSPDLDAALEQTRHVAQ 537 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + F + L Q ++ A AL Sbjct: 538 KILQHIAEPYLLETRHYQSTVSIGIAMFGDTPTSRDELFKQADLAMYRAKAEGRN-ALCF 596 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMT 534 + Q T + + + AL + + +LY QP + + G + ++ G++ Sbjct: 597 FNPAMQAQVTARTAIEADLHQALARSEFVLYYQPQVNIDGQQFGVEALVRWQHPQRGLVP 656 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGR 592 P +F+P+ L +L + + L ++ +VN+ Q + Sbjct: 657 PLEFIPIAESTGLILPLGRWILSTACRQLVAWAASPEQAHWSIAVNVSARQFRQSDFVQT 716 Query: 593 IIRLFKRYHISPQAVILEITEEQA--------FSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + ++ + +PQ + E + + L G R ++DDFGT Sbjct: 717 VEQVLRDTGANPQR--------LELELTESLLVDDVEVVIARMSALKALGVRFSLDDFGT 768 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL D +KID FV+D+ + DA IV++I L A +L V+AE VET +Q Sbjct: 769 GYSSLSMLKRLPLDQLKIDRSFVRDLRHDPQDANIVKAIVTLGFAMNLQVIAEGVETAEQ 828 Query: 705 QALLHKLGVQYLQGYLIGRPQPL 727 + L LG + QGYL GRP P Sbjct: 829 RDALVNLGCTHFQGYLFGRPAPA 851 >UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GYS2_SHEPA Length = 1072 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 97/631 (15%), Positives = 226/631 (35%), Gaps = 35/631 (5%) Query: 126 FWLGLVTPIGIKCSMYLVG--SFFDFPLKISTFFGDADAIF--TVVDLLSLFTAVLIYNM 181 ++ L + +YLVG D + D + + ++L Sbjct: 427 LYISLFAGLLFFYIVYLVGRNIANDLIDSVRGIVDDVEKLAKDPSLELALEVKGKDELTQ 486 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + + +M+ ++ + A + + I G Sbjct: 487 IALAVNQMVSERMKSRRALHQASAVFRHSAEGIIVTDANN------HIELVNPAFTKITG 540 Query: 242 YLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + + L ++S+ + Y + + Sbjct: 541 YTLDDVKGKSPSILSSAHHQEDFYQQLWRSLSSKNSWEGEIWNKRKGGKIYPEYLKITAV 600 Query: 299 IS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------E 347 + ++ + + ++ + + D LT LPN +Q Sbjct: 601 KNSKNKTIQHIGLFLDISNNKQYEQDIWYKTNFDSLTKLPNRHLFSSRLQQAIDSAHNTN 660 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + + +D +F++ +G ++ L ++ ++ + ++ G E +++ Sbjct: 661 SQVAIFFIDLDRFKFINELHGHAAGNKVLKQSATRLEAVLGPDDSIARIGGDEFVVISPQ 720 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 G + + L ++ ++N + + + + ++ LL Q Sbjct: 721 TGNVG-AEQLAQKLSDTLAKPYLFDNKETIISSSFGIAFYPEDGQDIEMLLHNSETAMYQ 779 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + ++ + +++ L +R A+ Q + L QP+ + E + Sbjct: 780 AKRDGRAH-YQYFSPEMNVEMLERMHLEQRLRKAVKQSEFYLEYQPVIDMHSGEVTSVEA 838 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 ++ D G+++P F+P+ + L +L+ L LA + ++N+ Sbjct: 839 LVRWQDPDYGVISPQAFIPIAEEAGLIEPLGEWILQQALSDLAQWHAQGLMLKMAINVSA 898 Query: 582 LTL---LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + + ++ I+ + + +EITE + + +E + + G I Sbjct: 899 RQCIHSRDISFFDILKQTLAKHDIAAENLHIEITESMLIEDKPQCLQTLESIKQLGVDIY 958 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY+ L + +IKID F+ + + N DA ++++I +A++ + +VAE Sbjct: 959 LDDFGTGYSALSYLTQCPISVIKIDKSFIDNALDNPSDAKLIKAIVMMAQSLEMPLVAEG 1018 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET +Q L LG Y QGYL+ +P A+ Sbjct: 1019 VETVEQWHFLRNLGCDYAQGYLMSKPLAKAE 1049 >UniRef50_C7MR68 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Actinomycetales RepID=C7MR68_SACVD Length = 919 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 110/616 (17%), Positives = 218/616 (35%), Gaps = 34/616 (5%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF-AQILWRRDIA 205 +S G T+V + A R+ SP +L D Sbjct: 302 QALGRPVSELVGVTLDPATIVAEGGVVEAEHRKADGSALTVRVSASPMDDGYVLMCADET 361 Query: 206 PSLGKEKRAFTLSWLAALSVLL-------------LLLCTPYENDFIAGYLVPVFFIIFT 252 E+R T+ V++ + + G +F + Sbjct: 362 ARRTVERRYRTVVTALDEGVVVIDENELVGSANPAAGRILGLPVEAMIGCSPALFPLYDE 421 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMV 309 G + + + + L+ L S ++ Sbjct: 422 SGARVPPSEYPSALTRRTGHASHGRVLRARRPDGQWVWLSMSCRPLDSDKTPPHEVVVSF 481 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKSFCCLRIDNLEFM 363 + R A DPLT L N + Q E+ + +D + + Sbjct: 482 TDITERRAIGERLEHDATHDPLTNLANRTLILQRLEEMLRRSGGRPVCVLFIDLDKFKVI 541 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + G + +R L +++ + + +L G E +V S + ++Q ++ + Sbjct: 542 NDSLGHGIGDEVLRIAGERLKNCVRQGDLVGRLGGDEFAIVASDMAHDSQIQALIGRIRR 601 Query: 422 -NSRQIHWNNTGLDMGYGAAW-GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + L + ++ + + LL Q+ + + Sbjct: 602 ALTEPVVVEGRRLRIDASIGVVTTHADDERSAEDLLRDADVAMYQAKTRGRGR-YEFFDV 660 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPD 536 + + +Q+ L +R ++ G L + QP+ + + +L G ++P Sbjct: 661 ELRERVQRQLRLEQDLRESVRGGQLWVAYQPVVDLRTQQRVAVEGLLRWDHPVHGRISPG 720 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+PL + +L +L + + LA+ + +VN+ L ++ + Sbjct: 721 EFIPLAEESDLINLIGGHMLRTATRELASRRRHSGVRTQLAVNVSARQLDDGSVVSAVNE 780 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + P + LEITE E++ + L G R+AIDDFGTGY++ +L +L Sbjct: 781 ALRATGLPPGELCLEITESALMQEPEAAADVLTALRDLGVRLAIDDFGTGYSSLAQLWKL 840 Query: 656 QADIIKIDGVFVKDI--VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 D +KID FV + + I++ I +A + L+VVAE E ++Q A+L +LG Sbjct: 841 PLDTLKIDRSFVAGLDGPNHPDAEAIIKGIITMAHSMGLTVVAEGTENERQIAILRELGC 900 Query: 714 QYLQGYLIGRPQPLAD 729 QG+ +G+P P + Sbjct: 901 DQAQGFHLGKPAPAHE 916 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 13/164 (7%), Positives = 29/164 (17%), Gaps = 11/164 (6%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC- 231 F A N + R++ + R L L+ + + Sbjct: 104 FLARAQGNAATGKVERLVG-IATDVTERFNNTRELDDLADRYRLLVELSPEGICVHQDGK 162 Query: 232 ------TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQ 283 A + I L ++ Sbjct: 163 LVYINPAAARFVKAASPTQLLGRPITDFVRPAAVPELLRRISSLREPGEATEPTEVRLRT 222 Query: 284 GVETEYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQA 326 + + + ++R + QA Sbjct: 223 LDGGSLCIESVSVRITWRGKPAYQVIMRDITAQKAAQAALRYQA 266 >UniRef50_B8CTT8 Sensory box/GGDEF/EAL domain protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTT8_SHEPW Length = 710 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 97/469 (20%), Positives = 189/469 (40%), Gaps = 18/469 (3%) Query: 278 NQNFLQGVETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 +F + + + + + L + + QA D LT LP Sbjct: 207 EDHFWRADGSSFPVEYWSHPMTLNDNKMGAVISFHDNSERLESEALIRHQAHYDALTDLP 266 Query: 336 NFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + EQ + L +D+ + ++ G + + L+ Sbjct: 267 NRFLALRRLEQLVDASARSGKMLAVIFLDLDDFKKINDSLGHEAGDQLLITAADRLMKAT 326 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 ++ + + +L G E +++L G + Q + L + + +N L + + Sbjct: 327 RKEDTVGRLGGDEFIILLDGLSSANDAQPLAENLIGGFRKPFYIDNRQLILTASIGIAIY 386 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + +T LL + + ++ + ++++ + I AL++G+L Sbjct: 387 PNDGKTPSELLRNADSAMYHTKSIGRN-TYSYFTHAMNKEVSRRLAIEEQIHGALERGEL 445 Query: 505 LLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 ++ Q + G + +L GI++P +F+P+ Q + +L L+ Sbjct: 446 QVHYQIQLDIRDGSIMGAEALLRWDNPVLGIVSPAEFIPIAEQTGVIEPMGEFILHRALE 505 Query: 562 WLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 T R ++NL P N+ I + + P+ + LEITE S Sbjct: 506 TALTWQQTFNDEFRVAINLSPRQFRNPNLVQLINDCVNQLGMKPKDLELEITEGVLLSGH 565 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 ++ + L K GF I++DDFGTGY++ L+ I+KID F+KD+ T+ ++ Sbjct: 566 AYTLDALMALSKAGFCISMDDFGTGYSSLSYLRTYPFQILKIDRSFIKDMNTDDTSKELI 625 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + ++A A + V+AE VETQ+Q L + Y QG+LI +P L + Sbjct: 626 IATIEMAHALGIRVIAEGVETQEQFDELSFMMCDYAQGFLISKPVVLDE 674 >UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNV7_THASP Length = 884 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 107/582 (18%), Positives = 211/582 (36%), Gaps = 39/582 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV------LLLLLCTP 233 ML + L + + R + + +R+ L A+ + +++ + Sbjct: 294 AMLLWALFLGVTGLAAWLLY--RLVDANDRANERSRILLQNASDGIHITDAEGIVIEASD 351 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSL 291 + V + P + + ++ + + + + Y + Sbjct: 352 AFCRMLGRSRSEVIGMRAGSWDACHPEPDMRALISELFASSEVHTFETAHRRKDGSVYPV 411 Query: 292 AFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 L L R + A D LT LPN R L + Sbjct: 412 EVTAFPLEVDGRTVLFNSARDISARKSAEAEVRKLAYFDALTGLPNRRLLMERLERAQAS 471 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 Q + + +DN + ++ G + + L+ +++++ + +L G E + Sbjct: 472 CARQGTVGALLFIDLDNFKAVNDTVGHQEGDRLLVQVAAILVRCVRKDDTVARLGGDEFI 531 Query: 403 LVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL-QP 453 ++L E + + + + + ++ ++ F + Sbjct: 532 VMLEELGGEGREAAEQAAAVGSKILAALNQRFQLGSSEHRTSVSIGVSLFGELADEPVDE 591 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 L + ++ A+ + + + + + AL+Q +L+ QP Sbjct: 592 PLRRADMAMYRAKLGGRN-AVCFFDPSMLADVRARADVEAGLWIALEQRQFVLHYQPQVA 650 Query: 513 -NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-----H 566 + G + ++ G++ P +F+PL + L VLE+ LA Sbjct: 651 ADGAVLGVEALVRWHHPVRGLVPPGEFIPLAEECGLILPLGRWVLEAACAQLAAWADDPW 710 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 +VN+ L ++ ++ +R P + LE+TE ++ + Sbjct: 711 RSR---LVIAVNVSARQFLHEDFVAGVVAALERSGADPGRLDLELTESSLVTDVDKVSEK 767 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 +E L G ++DDFGTGY++ LKRL D +KID FV+DI+ + DA I R I L Sbjct: 768 MEALKALGVGFSLDDFGTGYSSLAYLKRLPLDQLKIDRSFVRDILVDPNDAAIARMIIVL 827 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A L V+AE VE ++Q+ L + G QGYL PQP+ Sbjct: 828 ADNLGLRVIAEGVECEEQRDFLARNGCSSYQGYLFSAPQPID 869 >UniRef50_Q1NX89 PAS:GGDEF:EAL:Response regulator receiver n=4 Tax=Deltaproteobacteria RepID=Q1NX89_9DELT Length = 730 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 110/596 (18%), Positives = 206/596 (34%), Gaps = 53/596 (8%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--LCTPYENDFIAGY 242 + + R E ++ +V+++ L N Sbjct: 125 AALERVREKKQLRQNIREGEERLQRSEGFLHSVLESLGDAVVVIGRDLRIITANRGYRQQ 184 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTW-----------AVSTLCLLNYNQNFLQGVETEYSL 291 I ++ + + W A+ N + Sbjct: 185 SGRGEEEIIGQHCYRISHGYSRPCWLEEDCVCAVIQAIKEGRPANSIHIHRDKEGVPLYV 244 Query: 292 AFILAVLISFSVCL---LYMVRIYHRSEWLNRR-------WHLQALTDPLTLLPNFRALE 341 L + + + +R + L + A D LT LPN R L+ Sbjct: 245 ETNAYPLRDQNGHIYAAVETIRDITEIKELEQEKRAKEAEIERLAFYDFLTDLPNRRLLQ 304 Query: 342 QAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 EQ + L +DN + ++ G ++ R L ++E++ + Sbjct: 305 DRLEQAFAASERSGQYGAVIFLDLDNFKNVNDTRGHRTGDLILQMTARRLRDTVREDDTV 364 Query: 394 YQLPGSELLLVLSGPETEGR-----LQHMVNIL---NSRQIHW---------NNTGLDMG 436 +L G E +++LS T+ + + + +R + +G Sbjct: 365 ARLGGDEFVILLSNLATQSETAISRVGRVAEKIRLALARPFQLTKPQQGSSLESGEFHLG 424 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F G++ + + L ++ A + + + L +R Sbjct: 425 ASLGIALFRGHENSAEELFKYADTAMYRAKEAGRNTA-RFFDPAMQTALEENESLERDLR 483 Query: 497 TALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A+ Q LY QP + G + +L G ++P F+PL + L Sbjct: 484 RAVVQEQFELYYQPQVDAAGRLLGAEALLRWYHSARGPVSPLSFIPLSEENGLILPIGRW 543 Query: 555 VLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL+ + LAT R ++N+ Q + + + P+ + LE+T Sbjct: 544 VLQEACRQLATWSQSFPVGDFRLAINVSARQFHQPGFVDEVQEIIAAARVEPRQIKLELT 603 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E ++ + ++ + QL G A+DDFGTGY++ +LK+L + +KID FV+D+ T Sbjct: 604 ETLVLTDLDDTIKKMRQLQAAGLGFAMDDFGTGYSSLAKLKQLPLEQLKIDRAFVRDLET 663 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + DA I +I + + +VAE VE+ +Q +L G QGY P P A Sbjct: 664 DPHDAAIAATIIAMGRTLGFEIVAEGVESAEQLQILQSQGCGIFQGYYFTPPLPAA 719 >UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Methylobacterium RepID=B1ZEQ0_METPB Length = 716 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 106/574 (18%), Positives = 207/574 (36%), Gaps = 39/574 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVP 245 + H ++ A + +R + + + ++ + +P Sbjct: 120 DVTEQHRTRLALVEAHAELSEQNRRFDAALENMTHGLCMFDAEQRLLVWNRRYLEIFGLP 179 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN------------FLQGVETEYSLAF 293 + +G + + L L + ++ L+ + +A Sbjct: 180 EGALHVGMGQRAIIEVLVALGRYKRGLTVDAVSEGTRTSLTDEGPKAVLRELADGRVIAV 239 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ-------APEQ 346 + + R A D LT LPN L + A Sbjct: 240 THRPMA-EGGGWVATFEDITERRRNEARIIHMARHDGLTDLPNRTRLREIGAERVEALRT 298 Query: 347 E--AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + CL +D + ++ +G + +R++ L ++ ++ + +L G E + Sbjct: 299 GADGQLAVLCLDLDRFKPVNDSFGHAVGDALLRAVAGRLRGHVRGHDVVARLGGDEFAV- 357 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQE---TLQPLLGQL 458 LS E + L + + +++G + ++ LL + Sbjct: 358 LSHVEDAAGAMGLAERLIEIVAAPYRLDGITVEIGMSVGIALAGAEDDLPRDIECLLKEA 417 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---E 515 ++ A E + +++ L +R AL Q L+ QP+ + Sbjct: 418 DIALYEAKTGGRGTA-RLFEPQMDATLRERLGLERELREALAQSRFELHYQPLVDLSDNR 476 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF 575 G + ++ + G++ P F+PL + L VL + A P Sbjct: 477 ITGMEALVRWRHPERGLVNPAVFIPLAEETGLIVPIGEWVLSQACRDAAAWPDA---ISV 533 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ PL L + ++ + + LEITE + E ++ + L + G Sbjct: 534 AVNVSPLQLRNRGFVQSVLGALATSGLKASRLELEITESVLLDDTEVNLETLHSLRRLGV 593 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 RI++DDFGTGY++ L+R D IKID FV D + I+R+I L + ++ + Sbjct: 594 RISMDDFGTGYSSISYLRRFPFDKIKIDRSFVPDSAGQSDAGAIIRAIVSLGASLGITTL 653 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+ Q A + G Q +QGYL P+P+ + Sbjct: 654 VEGVETEPQLATIRAEGAQEVQGYLFSPPRPVHE 687 >UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLE3_9GAMM Length = 821 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 100/559 (17%), Positives = 194/559 (34%), Gaps = 30/559 (5%) Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIA--GYLVPVFFIIF 251 + E + +L A ++ L ++ T + + + + Sbjct: 234 RLNESVLELSRSESFSRSLMENAGDAMFLCKSDTSIVRTNRQAELTLKIDSNKIIGRSLA 293 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-LAVLISFSVCLLYMVR 310 +S + + + + + + + V + + +L M R Sbjct: 294 DFSESFTVAELEKRFDELSDDQVSTFEDLQIDSTGSAFPIEARGIKVHLEEQLYILIMAR 353 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEF 362 + ++ + A D LT + N R + + +D + Sbjct: 354 DITARKAAEKQVYELAFFDTLTGMANRRLFMDRLSSSLVLHQTNGKYGAVLYMDLDRFKT 413 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHM 417 ++ G +++I + ++ + G E +++L H+ Sbjct: 414 INDSLGHGAGDLLLKAISGRINSIIPTGATSARFGGDEFVILLPEAGIDKESCIEAAAHL 473 Query: 418 VNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + ++ L F +L + + A Sbjct: 474 AEDIIQQFTDPFLVDSHSLYCTISVGIALFPEQNSNSGDILRRADTALYRVKAKSRN-GF 532 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGI 532 + + +++ + + A++ G+L L+ QP E G + +L + G+ Sbjct: 533 QFYDPEMQSSAQERLNVEKGLHQAIEHGELELWYQPQIGAKGECIGAEALLRWNHPERGL 592 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNI 589 + P F+ + VL + L R +VN+ PL +Q + Sbjct: 593 VFPGDFIQIAEDSGQIVEIGNWVLAQGVSQLKGWMERGLPSTFRRLAVNVSPLQFMQVDF 652 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R+ L I + LEITE +N E + ++ L K G AIDDFGTGY++ Sbjct: 653 VDRVSTLLDESGIPGFMLELEITENMLLNNFEIASQKMKLLKKKGVSFAIDDFGTGYSSL 712 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 + L+ L DI+KID FV D+ ++ A IV+ I A L V+AE VET ++ L Sbjct: 713 KYLRHLPLDILKIDRSFVTDLRPHSEQAAIVQVIIATADRLDLVVIAEGVETTEECNTLS 772 Query: 710 KLGVQYLQGYLIGRPQPLA 728 +LG QGYL +P Sbjct: 773 QLGCNCFQGYLFSKPVQAE 791 >UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=Q478L4_DECAR Length = 1665 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 98/576 (17%), Positives = 199/576 (34%), Gaps = 23/576 (3%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + +++ I A+ + + + + +L + Sbjct: 947 VVNGYWDGQPALIGISQDISERLMAEERQQLAASVFDNAHEG---IMITDPKGNILEVNA 1003 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 T E + + + + + + Sbjct: 1004 TFTELTGYSRAEALGNTPDMLKSGHHDPAFYEEMWQKIRDDGYWRGEIWNRKKSGEIFVE 1063 Query: 292 AFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 ++ + + + + + +R A D LT LPN L Sbjct: 1064 QLTISSVRNRDGALSNFVAIFSDITLLKQHQQRLEHLAHFDALTQLPNRMLLSDRMQLAK 1123 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + C L +DN + ++ YG + + + + L ++ + + +L G E Sbjct: 1124 AQAERSGKTLAVCYLDLDNFKPINDRYGHSVGDFLLIEVAQRLKTCVRAGDTVARLGGDE 1183 Query: 401 LLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +L+++ + H + + S+ + + + + + LL Sbjct: 1184 FVLLITNLDDLNECDHAMTRVISALSQPFRVSAQFVTVSASIGVTLYPHDGSDSDTLLRH 1243 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-- 515 + + + + + IR L G+ LY QP N Sbjct: 1244 ADQSMYAAKQEGRNR-YHLFDPENDRRARLRREEIGQIREGLANGEFKLYYQPKVNMREG 1302 Query: 516 -GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGP 573 G + ++ + G++ PD FLP + L+ V++ LK + Sbjct: 1303 SFIGAEALIRWQHPERGLLLPDSFLPALEGSELAIDIGDWVIQEALKQIDAWHRTQGIDL 1362 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 S+N+ + L + R+ L Y +++P + LE+ E A + +++ + Sbjct: 1363 SVSINIAGIHLQHPGFSRRLGELLAAYPNVTPGQIELEVLETAALEDIQTTAELFAECRN 1422 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G A+DDFGTGY++ +RL AD++KID F+++++ +T D IV + L A Sbjct: 1423 LGVTFALDDFGTGYSSLTYFRRLPADMLKIDQSFIRNMLDDTDDLAIVEGVIGLTHAFKR 1482 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VET + +L LG QG+ I RP P Sbjct: 1483 QVIAEGVETVEHGLVLLLLGCDMAQGFGIARPMPPE 1518 Score = 45.4 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 43/171 (25%), Gaps = 11/171 (6%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSVL 226 +L L + + + L L + A R + + +R L V Sbjct: 234 NLAGLLSEHTLMSPLKLGLIDDALIDRQALARAREAMLDETARNERYQRALLDNFPFLVW 293 Query: 227 L-----LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 L LL AG + L +L + AV Sbjct: 294 LKDTESRLLTANRAMAKAAGSDSVIGKTDRELWPPELASAYRADDLAVMASRQNKIVVEP 353 Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNR--RWHLQAL 327 + A +I+ LL V R + + QAL Sbjct: 354 IIVDGQTVWHETYKAPVIADDGTLLGTVGFARDISERKRAEEAMQLRNQAL 404 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 102/424 (24%), Positives = 186/424 (43%), Gaps = 16/424 (3%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 A DPLT LPN L + + + +D + ++ G + Sbjct: 527 EELKKMAYFDPLTGLPNRTLLRDRIESAIHFANRNGSKVAILFIDLDYFKTVNDTLGHDV 586 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW 428 + + + L + +E + + + G E + V+ + + + S Sbjct: 587 GDRILVQVAKRLSSVFRETDTVARFGGDEFVAVIPDVRDLKDVVQVAERILSLFSTPFEA 646 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N + + + N E L+ ++ E ++ + + Sbjct: 647 NGEDIYLSASVGIAVYPDNGENPTELIKNADMAMYRAKEEGK-SNFSFFTEEMNSKAVEI 705 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + + N + AL++G+ LLY QPI + G + +L D G+++P KF+P++ + Sbjct: 706 LSVKNKLHKALERGEFLLYYQPIYSLGDNSIVGLEALLRWRDPDRGLVSPAKFMPILEEL 765 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L V+ K G SVN+ P + +N R++++ + + + Sbjct: 766 GLVKEVGRWVMGEAFKKSREWGDR-YGIYVSVNISPRQFMDRNFVKRVLQIASDTNANNE 824 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 V+LEITE N E S+ +++L GF++A+DDFGTGY++ LKRL DIIK+D Sbjct: 825 HVVLEITETSLMRNPEESVSILKRLRAKGFKVAVDDFGTGYSSLAYLKRLPIDIIKVDMT 884 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F + +V + +D IV ++ L+K+ L +AE VET++Q +L +LG QGYL G+P Sbjct: 885 FTQGMVKSNVDRSIVMAVIGLSKSLGLKSLAEGVETREQVNILRELGCDLAQGYLFGKPM 944 Query: 726 PLAD 729 + Sbjct: 945 KEEE 948 >UniRef50_Q2N9U3 Sensory box/GGDEF family protein n=3 Tax=Sphingomonadales RepID=Q2N9U3_ERYLH Length = 909 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 124/718 (17%), Positives = 235/718 (32%), Gaps = 51/718 (7%) Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 + + ++P++ + + L S+L A + S F + + L + TR + Sbjct: 76 WTFMALLPLVAAVVGSLLTQALPSYLAIAAFVSSALFFGIASKVSLWERSFTREVLSAAA 135 Query: 119 RY------------VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 + L+ L PI + + L + Sbjct: 136 AAVAVTVVPSLLYGLALGLWVLLGDLPIAAGVMGVISFNAISATLLTGRPRPMYACLAAS 195 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 L+L +F + Q R+ A ++R + Sbjct: 196 WAPLALMEGNPTNVTMFAVFAAGLAILSRYQAKIDRERAERRQTDERILNRAIDILRDYE 255 Query: 227 LLLLCTPYEND---FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-- 281 +E D + PV + T + P L F Sbjct: 256 ETGNGWFWETDRRGLLTYVSGPVANRLGTKAKRLIGRPITELFDLAHDNREGERTIAFHL 315 Query: 282 ------------LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQA 326 G+E E + + A Sbjct: 316 SARSAFQELPVKAAGIEEERWWSISGRPIFDSFQNFCGFRGSGTDLTEKRRSQEHASRLA 375 Query: 327 LTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT L N + Q+ E+ + L +D + ++ G ++ Sbjct: 376 HFDSLTGLANRHQMSQSLEKILASPKVANRECAVFLLDLDRFKHVNDTLGHPAGDALLKQ 435 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDM 435 + L + ++ +L G E ++L G + +L ++ + S+ + + Sbjct: 436 VAERLESTVGNMGRVGRLGGDEFKVILPGRVPKDKLSYLAAGIIRSLSQPYSIEGQRVVI 495 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G N E+ + ++ + + ++ L + Sbjct: 496 GVSIGIAISPENGESSEDVIRNADLALYAAKDGGRGR-FHFYSNDLHSAAEERSQLERDL 554 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ +G L L+ QP+ + G++ +L G ++P KF+P+ L Sbjct: 555 REAISEGQLELHYQPVVQTATERIAGFEALLRWKHPQHGYISPAKFIPIAEDTGLIQAIG 614 Query: 553 LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 + + LA+ P R +VN+ PL + + I + ++P + LEIT Sbjct: 615 EWAIRTACHDLASWPK---SIRCAVNVSPLQFSNEQLPTIITSALAQAGVAPTRLELEIT 671 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E ++ E + L G R+A+DDFGTGY++ LK + IKID FV+ Sbjct: 672 ESVFLNDDEGTDAMFAALSGIGVRLALDDFGTGYSSLGYLKTAPFNKIKIDQSFVRGATV 731 Query: 673 -NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + I+ SIT LA+ + AE VET + L+ G ++QGY+ +P A+ Sbjct: 732 PGSRNGAIIASITSLAQELGMDTTAEGVETLDELDLVRMHGCSHIQGYIYEKPLNKAE 789 >UniRef50_UPI0001850D38 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850D38 Length = 446 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 86/432 (19%), Positives = 173/432 (40%), Gaps = 15/432 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAGKSFCCLRIDNLEFMS 364 + A DPLT + N + + + + +D + ++ Sbjct: 2 IVELLKVQTDLEYLAHFDPLTNVYNRNYFIDKFKDFVFYADDKDEMALLFIDLDRFKIIN 61 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + ++ + L+ + +E + +L G E ++++ + + + Sbjct: 62 DMLGHLEGDTVLKGVAERLMNVCKEENVIGRLGGDEFIILVPKIRHMDDVLILAQNIINT 121 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 S + F + + +Q L+ + ++ + Sbjct: 122 LSLPYKLKGGEYYITASVGISVFPQDGDDIQTLIKNADIAMYSAKERGKN-NYQFFDDAI 180 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + +V + +R A+++ +L L+ QP N + EG + ++ + G ++P F Sbjct: 181 KEKIVSKVQIEQELRHAIERNELELHYQPQVNIQTGKIEGVEALIRWMSPTLGFVSPATF 240 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + +LE+ K SVN+ + + + + Sbjct: 241 IPIAEDSGMIMEIGNWILETAAKQAKVWHDMGYSELTMSVNISMIQFMNPTLIQSVNHAL 300 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + ++P + LEITE A S E + +L + A+DDFGTGY++ LK L Sbjct: 301 NKSSLNPSFLKLEITETVAMSEPELVREILLRLKELNIEFALDDFGTGYSSLNYLKNLPV 360 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 DI+KID F++DI + D IVR++ ++A + + V+AE VET Q + L ++ LQ Sbjct: 361 DILKIDRSFIQDIDIDKNDFTIVRALIEVAHSLGMLVIAEGVETTSQLSKLGEVNCDMLQ 420 Query: 718 GYLIGRPQPLAD 729 GY+ RP P + Sbjct: 421 GYVFSRPLPANE 432 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 100/520 (19%), Positives = 187/520 (35%), Gaps = 21/520 (4%) Query: 228 LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 ++ I GY + +L++ A++T + Sbjct: 547 HIIMVNRAFSEITGYTQAEVLGQNPRILKSERQSPEFYLDMWTALTTSGHWAGEMWNRKK 606 Query: 285 VETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 T Y ++ L + + ++ R + D LT LPN L+ Sbjct: 607 DGTVYPEWMAISALRDSQGLTTHYVASFSDLSTAKAAESRIQWLSQFDTLTGLPNRTLLQ 666 Query: 342 QA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + + ID+ ++ G + + + R L ++E + + Sbjct: 667 DRTALALSMVQRAREPLTMLLVAIDHFGAVNDTLGHQLGDELLVEMARRLSDSVREQDTV 726 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E +LVL G G +L SR L + F N Sbjct: 727 SRMGGKEFVLVLPGTPAMGAAHLATELLWKLSRPCSLGMHELTLTASIGIASFPDNGADF 786 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L + ++ + + Q L+ +R A+ L L QP Sbjct: 787 DTLFKAVEIAMHRAQLKGRD-TYQFYSDDMYEQVLAHDRLIKALRQAIVLDQLQLVYQPQ 845 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + G + +L + G ++P +F+PL + L VL + + Sbjct: 846 VDLQTGQICGVEALLRWQHPELGAVSPGQFIPLAEESGLIIGIGEWVLRRACQDIRRWLD 905 Query: 569 DKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 ++N PL N+ ++ I P + +E+TE + + + Sbjct: 906 HGIKVPHVAINASPLQFRDNNLVLQVKAALTESQIDPALIYIEVTESALMDDVPRNEAML 965 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + L G ++++DDFGTGY++ LKR D +KID FV+DI T+ D+++V+ I +A Sbjct: 966 KALKDLGIKLSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQSDSLLVKVIVSMA 1025 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + V+AE VET+ Q ++ +QGY +P Sbjct: 1026 HGLGMKVIAEGVETEAQCEIMRTSICDEIQGYFFCKPISA 1065 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 12/148 (8%), Positives = 31/148 (20%), Gaps = 17/148 (11%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV--------------LLLLLCT 232 R+I + + RR E+R L+ A+ + + L Sbjct: 373 VRLIADAVWRIVRQRRAETALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPSVEKLRG 432 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + + L + + A + Sbjct: 433 FTSAEVMQQTLAQTLCPSSIPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTE 492 Query: 293 FILAVLISFSV---CLLYMVRIYHRSEW 317 + + ++ + R + Sbjct: 493 ISTNGMRNEQGDFVGIVGVSRNITERKA 520 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 21/216 (9%), Positives = 48/216 (22%), Gaps = 4/216 (1%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 L + + L LV + ++L + + A + +++ Sbjct: 13 LAGTSLIRAAGRLVLVYAVFAGLWIWLSDELLAWLVSDPAEIVQASIFKGWLFVVATSLL 72 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 + + + L + T + A LL Sbjct: 73 LYGLLRRLLRQSLVASMREQEAQAENHRSQQLLTALIDSSTDAIFAKDLAGRYLLFNHET 132 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA--VSTLCLLNYNQNFLQGVETEYSLAF 293 + T + + ++ +Y + LA Sbjct: 133 TRVMGTTPERALGHDDTALFPPEQAELIRANDQRVLALNRTTSYEETLETVDGERVFLAT 192 Query: 294 --ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 L + L + R + R L+A Sbjct: 193 KGPLRDSNGQVIGLFGISRDITDRKRDETRLTLEAR 228 >UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6D2_PELCD Length = 976 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 86/432 (19%), Positives = 163/432 (37%), Gaps = 16/432 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFM 363 ++ A D LT L N L++ + + C L +D + + Sbjct: 518 ISEQNKAQKKIAYLAHYDQLTGLANRSLLKERFDYAVRHAMRSGSQVALCLLDLDGFKAI 577 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + + + L ++ + ++ G E +++ + + +V S Sbjct: 578 NDLQGHHVGDQLLCEVAKRLQTSIRSTDMAARIGGDEFVILFTDMQKTSVATTLVQKAMS 637 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + F + L + + + Sbjct: 638 CFTSAYDLQEHTHTITASMGVAIFPEDGHDFPTLFKHADAAMYFAKESGRN-GVQFFRQE 696 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 + + ++ + +R AL + L L+ QPI G + ++ G++ PD+ Sbjct: 697 IGQRVQNRLTMETELRQALQEDQLELHYQPIWQLTEKCIVGLEALVRWRHPQKGLLPPDR 756 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + NL VL + + + + SVN+ L + + RL Sbjct: 757 FIPIAEESNLIQALGQWVLNAACRDMRSWRNQGFESLPVSVNISARQLFHDDFTSSLARL 816 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 K Y + P+ + LE+TE + + L G + +DDFGTGY++ L R Sbjct: 817 LKEYALPPEQLELEVTETIFLQKDTTVEKVMNHLKNIGVGLVLDDFGTGYSSLSYLNRFH 876 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F+ I DA++ +I +A++ + VVAE VET Q+ L + G Sbjct: 877 IDKLKIDRSFMAHICQKEQDAILTATIIRMAQSLGMQVVAEGVETAGQELFLMEQGCDLA 936 Query: 717 QGYLIGRPQPLA 728 QGY +PQP+ Sbjct: 937 QGYFYYKPQPIE 948 >UniRef50_Q39XT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39XT2_GEOMG Length = 820 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 106/658 (16%), Positives = 200/658 (30%), Gaps = 65/658 (9%) Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI----FTVVDL 169 R + + + + G D + ++D Sbjct: 177 AAKAEVRQAIRTAQFTIAVASLVALVLAIGGGSLVAASISRPIALLRDGVEQVGQGLLDT 236 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 TA L RM F + + + + + Sbjct: 237 RVEVTARNEIGTLAVAFNRMTGELQFTKNEIVTARNFLDNVIQSMADALVILSTDWTI-- 294 Query: 230 LCTPYENDFIAGYLV-PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + I GY + F V L + +L Sbjct: 295 ISVNPALCTILGYGENELLGSPFGRIVAGGAEERELLREMAERGQVPERELIYLARDGAA 354 Query: 289 YSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 ++ AV+ V ++ + + A DPLT LPN + Sbjct: 355 IPVSVSGAVMRSPTGEVVGIVCIAHDISERKRSEEEIRRLAFYDPLTRLPNRSLFQDKLA 414 Query: 346 QEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 Q + L +D + ++ G + ++ L ++ E L +L Sbjct: 415 QAIRRSRTDGDMIALLFLDLDRFKDINDTLGHAYGDQLLLAVAARLGDNLRPTEFLARLG 474 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E + +++G + + + + + ++ L + G+ + L Sbjct: 475 GDEFVFLVTGLRDKRSVGSLAHSILELLNTPFEIDDKELFISTSIGIALSPGDGDDGDTL 534 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-- 512 L + A E ++ + ++ L ++ A + L QP Sbjct: 535 LTHADMALYAAKEQGRN-AFSFFSEELNREARERRHLEGSLHRAFANDEFFLEYQPQIEL 593 Query: 513 -NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK- 570 + ++ ++ + G++ P++F+P+ + L R VL + Sbjct: 594 RSGRIFSFEALVRWQHPEDGLIYPNRFIPVAEETGLIRRLGEWVLRTACLQCRQWQQPGL 653 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA-------------- 616 R +VN+ Q + R Sbjct: 654 PPVRVAVNVSGHQFNQPGFIDMVDR-------------------VLEETELDPELLELEL 694 Query: 617 -----FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 + A+ S+ + L G +AIDDFGTGY++ LK D +KID FV+DIV Sbjct: 695 TESSLMAGAQESIMTLIDLKVRGIHLAIDDFGTGYSSLSYLKHFPLDRLKIDRSFVRDIV 754 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP-QPLA 728 + D IV +I +A + L V+AE VE + + LL + G +QG+ P P A Sbjct: 755 KDLDDRAIVEAIIAMAHSLGLRVLAEGVEHEDELELLKERGCDEVQGFYFAHPLLPAA 812 >UniRef50_C5BN58 Predicted signal transduction protein, with PAS, HAMP, GGDEF and EAL domainsl n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BN58_TERTT Length = 807 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 123/633 (19%), Positives = 235/633 (37%), Gaps = 28/633 (4%) Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 Q + + ++++ F L S+ D T ++ + A + N Sbjct: 161 QAFLRFSITLAFALTIALFV-AYFVGGRLVGSSLVPLRDLFNTSQEVAASPYANIRANKK 219 Query: 183 F-YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYEN 236 + ++ + D A + E R L+ A + + L ++ T Sbjct: 220 SNDEIGDLVDVFNQILDTLETDNAALMESESRFRVLAEHAPIGIFLRNRKLIMEYTNDRW 279 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFIL 295 I G K + ++ + + + +L L Sbjct: 280 CEITGLTPSQANAFTNNIDPKDAALYESVQDKARSQHTPQVIEYTYTTPQGSRRTLMEHL 339 Query: 296 AVLISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------- 345 A L + + + + A DPLT LPN R E Sbjct: 340 APLNNLQGFQGFVGSLLDVTELKTAQMELEKLAFYDPLTDLPNRRFFRGHLELTIAAAKK 399 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D+ + ++ +G + I + L + + ++ G E +L++ Sbjct: 400 YDKRLAVMMTDLDDFKKINDTFGHDAGDQLLMQIGKRLKAASASIDVVSRMGGDEFMLLV 459 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 ++ +L H N + ++ N +++G F + T + L+ Sbjct: 460 KNIDSSSQLDHKANNILRALREKMEINGQQVEVGGSIGIAVFPNDAITYEELIRYADIAL 519 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 + + + + + ++ L +R ALD+ L +Y QPI + E Sbjct: 520 YNAKSMGGN-TVSYYSSDLDKRIKDKMRLEQKLRVALDKRLLEVYIQPIYDAATREMIKG 578 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFS 576 + ++ + + G ++P+ F+ L + L VLE + +L H + Sbjct: 579 EALVRWMDPEEGFISPEVFVSLAEESGLIYDLGSLVLEKVCAYLHEHEGKLHLLGMRTIA 638 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL + I FK+Y I P+ + E+TE + + ++ + + G Sbjct: 639 VNLSARQFFASQLVTYIEATFKQYQIDPKQIEFELTESMVMDDVDQAIDIMRAIRNLGCS 698 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTGY++ LK+ + +KID F+KDI + D I +I +A L+VVA Sbjct: 699 LSIDDFGTGYSSLSYLKQFPINTLKIDRSFIKDIPEDKNDVEIAYTIIAMAHNLGLTVVA 758 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q LL YLQGY RP P++D Sbjct: 759 EGVETKEQWQLLRDKNCDYLQGYYFARPMPMSD 791 >UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SC92_CHRVI Length = 1124 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 96/520 (18%), Positives = 195/520 (37%), Gaps = 20/520 (3%) Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + + I L + F FL+ + + + + Sbjct: 437 IAEMFGYAIRELIGLPLQELIPPAFRRAHVLHVERFLHGSAYDRRMSE-RSELSGYRKDG 495 Query: 287 TEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 + + + L+ + ++ + A+ DPLT LPN + + Sbjct: 496 SIFPVEISLSKIQVDGRWVMVATILDVTERRLAEEELVWHAIHDPLTGLPNRTMIHERLE 555 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 +Q + + +D + ++ +G ++++ + L+ ++ + + +L Sbjct: 556 RALRRSKQQGQSVALLFIDLDGFKLVNDSHGHQAGDELLKTVAQRLVDHVRPGDTIGRLG 615 Query: 398 GSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +++ E+ + ++ + L + + L G + L Sbjct: 616 GDEFVVLCDHVESPAAVANLADRLNDLLREPVTLSGRRLFASASIGLAIGHGTTHSADDL 675 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L Q+ E + Q +++ ++N +R A+++ + + QPI Sbjct: 676 LRNADAAMYQAKEQGRD-GWRFFSEEIHEQARRRLDIINGLRQAIERDEFQVRFQPILCA 734 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK- 570 + G + +L GG ++P F+P+ V Sbjct: 735 QSQIIRGAELLLRWF-PSGGEVSPAHFIPIAEMSGSIVPIGKWVFRQACLAERQWRDRFG 793 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + P SVN+ L + + R+ P+ ++LE+TE S+ ++ + Q Sbjct: 794 VEAPYVSVNVSARQLNDEALVEEFRRMLAETGADPERILLELTETSLMSDVIFNLSVLNQ 853 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G R+A+DDFGTGY++ +L RL +KID FV + IV ++ +A+A Sbjct: 854 LAGLGLRVAVDDFGTGYSSLAQLLRLPLSKLKIDREFVDGLDKRHDSRAIVHAVCSMARA 913 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L V+AE VE Q L LG Y+QG+ RP P + Sbjct: 914 MNLKVIAEGVENASQFGYLRDLGCDYVQGFHFYRPLPPEE 953 >UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4J8_OXAFO Length = 1077 Score = 623 bits (1607), Expect = e-177, Method: Composition-based stats. Identities = 97/568 (17%), Positives = 199/568 (35%), Gaps = 29/568 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY 242 R+I A+ + RR K + A + ++ ++L+ +L + I GY Sbjct: 500 RLIGVLGIARDITRRKEDE--EKLQLAALVYKNSSEAILITNAKNEILAVNPAFERITGY 557 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + + + + A+ + Y + V+ Sbjct: 558 TPAEIMGKDPKILSSGRQDKAFYKAMWDALGKKGFWRGELWNRKKNGEVYLAWLTINVVY 617 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 + + + + QA D LT LPN R L +Q Sbjct: 618 NEDGSVRYYVELSNDFTEKKEAEDMIWRQANFDFLTGLPNRRMLLDRLQQEIVKVNQSGK 677 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +DN + ++ G M + + L ++E + + +L G E ++L+ Sbjct: 678 KLALLFLDLDNFKDVNDTLGHDMGDLLLVDVAGRLNECVREIDTVSRLGGDEFAVILTEL 737 Query: 409 ETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + ++ + + + + ++ L + Sbjct: 738 SDLRIAETVTQCMLRSLAQPYRLDGEIAYLSASIGMTVYPDDGTGIETLQKNADQALYAA 797 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 + + ++ L N +R A+++ + QPI + + + Sbjct: 798 KQAGRNR-MSYFTASMQAAAQNRIRLANDMRIAVEEHQFEMLYQPIVELGTGKIHKAEAL 856 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 + GI++P +F+ + + L + + + + S N+ P Sbjct: 857 IRWHHPLRGIVSPAEFISIAEETGLILTISDWAFREVAREVGRWRERYYPGFQISFNISP 916 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 K R ++++EITE + + + + H+ G IA+DD Sbjct: 917 ALFQSKTDYSDWFDELARLKAPGSSIVMEITEGVLLVSNWQVIAQLTEFHRHGMEIALDD 976 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK+ + D +KID FVK+I D + ++ +A + V+AE V+ Sbjct: 977 FGTGYSSLSYLKKFEIDYLKIDQAFVKNIENEPKDMALCEAMIVMAHKLDMKVIAEGVQN 1036 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q+ LL G Y QGYL P A+ Sbjct: 1037 ERQRWLLAGAGCDYGQGYLFSEPLAAAE 1064 >UniRef50_A8GZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GZQ7_SHEPA Length = 696 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 102/548 (18%), Positives = 202/548 (36%), Gaps = 24/548 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 + + AA+++ + + + GY P ++ + Sbjct: 124 QEEMQTNDPLLKAVLESAAVAIYAIDDKGKCIFANPICAQLLGYTSPE-QLLNFNMHELI 182 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSE 316 + F + + + + + L + Sbjct: 183 YQNHSCTEATLPLSNGEVKEDIFWRADGSSFPVDYKSQPLVLQHNRNGAVISFYDNSERL 242 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYG 368 QA D LT LPN + EQ + L +D+ + ++ G Sbjct: 243 EAEALIRHQAHYDTLTELPNRFLALKRLEQLVEASERSGQMIAVIFLDLDDFKKINDSLG 302 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 + S + LL + + + +L G E +++L G + Q + L + Sbjct: 303 HEAGDQLLISASKRLLNATRSEDTVGRLGGDEFIILLDGLSSASDAQPLAENLIGGFRKP 362 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + +N L + + + ET LL + + ++ + Sbjct: 363 FYIDNRQLVLTASIGIAIYPNDGETSSELLRNADSAMYHTKSIGRN-TYSYFTHAMNKEV 421 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++++ + I AL++G+L + Q + G + +L G ++P +F+P+ Sbjct: 422 SRRLAIEEQIHGALERGELQAHFQIQLDIRDGSIMGAEALLRWNNPTLGNVSPAEFIPIA 481 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 Q + +L+ L+ T R ++NL P N+ I ++ Sbjct: 482 EQTGVIEPMGEFILKCALEAARTWQKLFNDKFRVAINLSPRQFRNPNLVQLITDQVYKFG 541 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P + LEITE S ++ ++QL GF I++DDFGTGY++ L+ I+K Sbjct: 542 MRPDDLELEITEGVLLSGHAYTLDALKQLSNAGFCISMDDFGTGYSSLSYLRTYPFQILK 601 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ D+ + ++ + ++A A + V+AE VETQ+Q L + Y QG+LI Sbjct: 602 IDRSFISDMNKDGKSNELIIATIEMAHALGIRVIAEGVETQEQLDELSFMMCDYAQGFLI 661 Query: 722 GRPQPLAD 729 + PL + Sbjct: 662 SKAVPLTE 669 >UniRef50_A6CKI1 Sensory box/GGDEF family protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CKI1_9BACI Length = 778 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 127/748 (16%), Positives = 250/748 (33%), Gaps = 38/748 (5%) Query: 13 IFTLAFTLTVVLIQLSRFISP---LAIIHSSYIFLAWMPLCVMLSILFI------FGWRG 63 I +L F + L +S + FL + V +I I F Sbjct: 13 IASLVFGAIIYFSYLYGNMSGIEANVGVLLGIGFLIFNTWAVNTTINTICLREISFFKLI 72 Query: 64 VVPVLCGMFCTNLWNFHLSFLQT-AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW 122 ++ + + + + + + + L T Sbjct: 73 FSSIIFASCISLVNMIDIWSEMVEHDLKMNILLFISANILLAGNVLATIRFIRQIRSLER 132 Query: 123 QRLFW---LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 FW + + + S I F IF V L + ++I Sbjct: 133 VGFFWILFGSFAIGMAFASIRFTLFSSITLFSTIDLFTNRNIPIFEWVYLNNTLLPLMIN 192 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPY 234 F + +V F++I + + ++R TL A+++ L +L Sbjct: 193 I--FALVFLELVPGLFSEIHSKEQQELIIENKRRYETLFDNQAVAIFTLDPKGKILKLNN 250 Query: 235 ENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + GY + L F + + + Sbjct: 251 AVQQLTGYPIDQLKKGSSFAELIHESKEDEFSSYIMEAVKGSSQMFETKISTSEGKYIDV 310 Query: 292 AFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA- 348 L + + + + + A D LT LPN + +Q Sbjct: 311 QITLIPIFVKEKLANINILAKDITEVIQTREQIQHLAYHDSLTGLPNRFQFVKELQQRIE 370 Query: 349 ----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + C L +D + ++ G + + ++E+ K+ ++ G E + Sbjct: 371 TSKLPAAVCFLDLDRFKVINDVLGHQTGDRLLLQLSERFTSFVKEDVKVARMGGDEFTFL 430 Query: 405 LSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + L++ + L L + + + +T++ L+ Sbjct: 431 FPEIPSMAELENKIEELMALIQTPFQIEKQELFVTGSMGISIYPNDSDTVEDLMKYADVA 490 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 +S + + +++K++ L IR A+ + + + QP + G Sbjct: 491 MYRSKEKGKN-TFEFYHQQNDEESSKKLALEKDIRKAMKEKEFEIVYQPQVKVSTGKIFG 549 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + +L G++TP+KF+ L + L VL + + + + SV Sbjct: 550 VEALLRWNHPAEGLITPNKFISLAEENGLIHELGEWVLRESCRQVNQWHNEGYSDLQLSV 609 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L +N + R+ S + LEITE A + E + QL G I Sbjct: 610 NISLKQLYHQNFISTVKRVIDEEGFSTSLLDLEITESMAMKDIEYAKLIFNQLRALGISI 669 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFGTGY++ +K D +KIDG F++D+ + A+I+++I + + +L +AE Sbjct: 670 SIDDFGTGYSSLNHIKNFPIDRVKIDGSFIRDVPGSAEAAIIIKTIIAMTRNLNLLSIAE 729 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQ 725 VET++Q L ++ +QGY P Sbjct: 730 HVETKEQYEFLQEINCDEIQGYYCSEPL 757 >UniRef50_A0YWR3 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YWR3_9CYAN Length = 624 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 102/520 (19%), Positives = 198/520 (38%), Gaps = 25/520 (4%) Query: 229 LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 ++ + GY P G + L A++ + + Sbjct: 89 IVYINAAFTKLTGYSSPEIMGQTPQILQGPRTDYHVLKRLKQALTRGQVFEGEAINYRQD 148 Query: 286 ETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 +E+ + + + L + R + ++ + DPLT L N L Q Sbjct: 149 GSEFQNHCYIEPIFNNQGQIIYYLSIHREIIPQNPVQTQFSTRNNLDPLTGLANRSLLLQ 208 Query: 343 APEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 +Q + + L +D + ++ G H + +I + L ++ + + Sbjct: 209 RLQQSIDQAQQHPDYLFAVLLLDLDRFKLINDSLGHQAGDHLLTTIGQRLESCIRPTDMV 268 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G + +++L ++ + + ++ + N + + + + Sbjct: 269 ARLGGDQFVILLDQVRDLLKVSQVAERIQQYLNKPLTLKNQEVFISASLGIVLSSPSYDH 328 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + ++ +Q+ A ++ + +++ L N +R A+D L ++ QP Sbjct: 329 PEDIIRDADTALQQAKAGGKA-CYTVFDQTMHRHALERLQLENDLRRAIDHHQLQVHYQP 387 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 I G++ +L + G++ P+ F+P+ + L VL + Sbjct: 388 IIAMDTGRITGFEALLRWYHPERGMIPPNYFIPIAEETGLIQVIGQWVLREACQRAKLWQ 447 Query: 568 C---DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 SVNL L N+ + + P+ + LEITE AE+ + Sbjct: 448 LTFPQSPSLFMSVNLSIHQLTYPNLVEIVSDILTETGCDPRYLKLEITESAIAQKAETVI 507 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +EQL G ++ IDDFGTGY++ RL +K+D FV I + A I +I Sbjct: 508 PILEQLTALGIQLCIDDFGTGYSSLSRLYYFPITTLKVDRSFVAAISQSNGTAKIASAII 567 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +LA + L V+AE VET+QQ +L G Q QGY +P Sbjct: 568 NLAHSLGLEVIAEGVETEQQLTILRSWGCQLAQGYHWAKP 607 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 97/433 (22%), Positives = 172/433 (39%), Gaps = 19/433 (4%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQEA-----GKSFCCLRIDNLEFMSR 365 E ++ AL DPLT LPN + ++ + L +D + ++ Sbjct: 155 LEKAQQKLSYDALHDPLTGLPNRSLFLERVGRSLQRAQEEKDYSFAVLSLDLDRFKVVNE 214 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + +I RTL L+ + + +L G E ++L + + Sbjct: 215 SDGHRVGDRLLVAISRTLETLVGSTDTVARLGGDEFAILLEKIADVNEAIRTTQTIKKQF 274 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + +L ++ + +E + Sbjct: 275 VSPFQLTEREIFTSPSIGLTFSSPKYKHPEEILRDADIAMARAKQKGRGR-YEVFDEEMH 333 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFL 539 Q K + L +R A++ + L+Y QPI + G++ ++ G ++P +F+ Sbjct: 334 TQALKLLNLETDLRRAIENQEFLVYYQPIMALEKTKIVGFEALIRWQHPKKGFISPGEFI 393 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRL 596 P+ + L VL+ + L T SVNL L + I I Sbjct: 394 PIAEETGLIIPIGQIVLKEACQQLKTWQEKLPKAKNLTISVNLSSQQLKEPEILQHIDHS 453 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P+++ LEITE NA+ + + QL + +I++DDFGTGY++ L R Sbjct: 454 LNVTGLQPESLKLEITESLLMENADVATTLLRQLKERKIQISLDDFGTGYSSLSYLHRFP 513 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV I + I++SI LA + VVAE +ET++Q L L ++ Sbjct: 514 VDTLKIDRSFVNCIGKPEENLTIIQSIMALAHNLDMDVVAEGIETEKQLTFLKFLECEFG 573 Query: 717 QGYLIGRPQPLAD 729 QGY +P P + Sbjct: 574 QGYFFSKPLPSHE 586 >UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNH0_9PROT Length = 760 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 118/668 (17%), Positives = 243/668 (36%), Gaps = 35/668 (5%) Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 L + ++ + I + Y + L +++ K Sbjct: 89 LHALATSLIISVGIFVLLPENKPFYQAFLTMIVAGLSAGTVMSLSIYKDLARNYLIILLA 148 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 P I+ + + + L++LF +LI I+ + +L + Sbjct: 149 PFAIAMYKFGTEMHILMSLLITLFLMLLI--TFSKKHHEKIIELITSNMLVQDSEKELKL 206 Query: 210 KEKRAFTLSWLAALSV------LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 E ++ + V L++ ++ + + + + L + P L Sbjct: 207 SESNFSSIFKEVPIGVFTYDKNLIITEANRSISELLNAPIHKLVNMDMKLLRDQSIRPQL 266 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNR 320 + T + N + + E + + + L +V ++ Sbjct: 267 DATLSGERGYYEGEYHNLIS--DEEIWIKMQAVPMYDIDNQIKGGLGIVEDITGRIQADK 324 Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 + QA D LT L N L + + IDN + ++ G + Sbjct: 325 KIRQQAFYDHLTGLANRLTLNDRLEQQIARLARHNRFGAILFIDIDNFKTINDSLGHHIG 384 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET--------EGRLQHMVNILNSR 424 +++ + +M++ + + +L G E +++LS + ++ L Sbjct: 385 DTLLKTFAQRASSIMRKEDTVARLGGDEFVILLSDLSDNKNHALEYSHNVARKLHKLMKE 444 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 I L + +E + +L ++ E+ +S + Sbjct: 445 PIEVEEHSLYVTLSIGITTISEEEEDINVILKHADIAMYKAKQQGRNTT-CFFEQGMSKK 503 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 Q++L + +R AL LY QPI + + ++ G++ PD F+P Sbjct: 504 IEDQLILGSELREALKHNQFELYYQPIVETKSSIITSCEALIRWNHPTRGLIYPDDFIPY 563 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L V++ K S+N+ Q + +I++ + Y Sbjct: 564 AEESGLIISIGDWVIQRACIDYKKINHKIKN--ISINISSKQFNQDDFVTKILKATQEYS 621 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++P A+ LE+TE A N ++ + L GF IA+DDFGTGY++ LK L D +K Sbjct: 622 VNPSALKLELTESVALDNLLATTDKMNLLKSHGFTIAMDDFGTGYSSLSYLKNLPFDFLK 681 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F++ ++ N DA +V++I ++K V+AE VE ++ L L +Y QG+++ Sbjct: 682 IDRSFIQHVLDNEDDASLVKTILTISKQFKFEVIAEGVEEKEHVEFLKDLDCEYYQGFVV 741 Query: 722 GRPQPLAD 729 + P+ + Sbjct: 742 SKALPVNE 749 >UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=9 Tax=Alphaproteobacteria RepID=B1M3H8_METRJ Length = 829 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 95/538 (17%), Positives = 188/538 (34%), Gaps = 20/538 (3%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 +E L + + ++ + V + + + Sbjct: 279 IKAREASFRLLFENNPVPMWVVA-DARDRFLAVNDAAVAHYGYSREQFLSRAPADLAIAA 337 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + L L + + ++ + +L R Sbjct: 338 EEATELGLPAAGSLHRRADGSAIEVSLFQRAMPFEGRQAVLEAAIDMTERRRAEARIAHM 397 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN CL +D + ++ G + +R Sbjct: 398 AHHDALTGLPNRVLFRDRLGEAIARHARDGEEAVLLCLDLDKFKIVNDTLGHPVGDALLR 457 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLD 434 + +++++ + +L G E +++ G + ++ + + Sbjct: 458 EAAERIAGCLRKDDLVARLGGDEFAILVRGMDLPALADGLIARVIAELGRPFRLEGQDCH 517 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 +G + + L+ ++ A E + + N Sbjct: 518 IGTSIGVACLPRDGTDPETLMKNADLALYRAKAEG-GSTFRCFEPEMDAWVQARRRRENE 576 Query: 495 IRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R A +G L QP+ + ++ +L + G ++P +F+PL + L Sbjct: 577 LREAFARGQFSLVYQPLMDARSDRILAFEALLRWHHPEHGPVSPAEFVPLAEETGLIVPI 636 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+++ AT P R +VNL P+ + + + + P+ + LEI Sbjct: 637 GAWVMQTAFAEAATWPET---IRLAVNLSPIQFRNRTLVETVRGALAATGLDPRRLELEI 693 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE +++ +++ + L G RIA+DDFGTGY++ L+ D IK+D FV + Sbjct: 694 TESVLLADSAANLATLHALRDMGIRIAMDDFGTGYSSLSYLRSFPFDKIKLDRSFVSQVG 753 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 NT IVR++ L + ++ AE VET +Q A+L G +QG+L R P + Sbjct: 754 ENTHCTAIVRAVASLGTSLGIATTAEGVETPEQLAMLRAEGYDEVQGFLFSRAVPGPE 811 >UniRef50_UPI0001C42794 probable signaling protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42794 Length = 634 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 88/428 (20%), Positives = 174/428 (40%), Gaps = 18/428 (4%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 +R QA D LT LPN +E+ + + + L +D + ++ G Sbjct: 194 QARKRIEHQAYHDALTGLPNRYHIEEYLKRSIEYAKVNNSSLTLLYLDLDRFKLVNDLLG 253 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 + ++ + L + EN + + G E L+VL E ++ + + S Sbjct: 254 HQVGDLLLKEVAEKLSQTICENGMIGRQGGDEFLIVLEDM-NEEEVRAIAGRILDCLSYP 312 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + F + ++ ++ + S Sbjct: 313 FVYAGKEFFISPSIGISMFPKDGNDIESMMKNADTAMYMAKERGKN-NFQFYSSEPSSLL 371 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ LL N +RTAL + +L QP + E G++ ++ + G+++P++F+P+ Sbjct: 372 SRRHLLENKLRTALKNKEFILNYQPQVHLNSHELRGFEALIRWNNPELGLISPEEFIPIA 431 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + + VL+ + S+N+ ++ + K Sbjct: 432 EETGIITDIGTWVLKEACRQNKAWQEQGFVRVPVSINVSSQQFRDPEFVWNVLNVLKESK 491 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + PQ + +E+TE + ++ ++ + ++G ++AIDDFGTGY++ L +L DI+K Sbjct: 492 LHPQYLEIELTESTT-HHFVHTVEKLQLIKQYGIKVAIDDFGTGYSSLSALDQLPIDILK 550 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+K I+TN A I ++I DL ++AE +E Q L++ QG+L Sbjct: 551 IDRSFIKHILTNPNKAAIAKTIIDLGHNLDFKIIAEGIEEPSQADFLNEHQCHIGQGFLF 610 Query: 722 GRPQPLAD 729 P D Sbjct: 611 HPPLNPTD 618 >UniRef50_B9Z647 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z647_9NEIS Length = 1072 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 101/562 (17%), Positives = 214/562 (38%), Gaps = 26/562 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 + I + + R + ++ + I GY Sbjct: 483 QDITAQQVIDLELRVRQRAIEASVNAVLITDNRRPDNPIIY---VNPAFERITGYARATV 539 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SF 301 F G + + A+ + + + +A + Sbjct: 540 IGRNCRFLQGRDTAQPELTAIRRALENRHEGKALLRNYRKDGSMFWNELRVAPVRDSQGE 599 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 + ++ ++ QA D LT LPN L+ Q + Sbjct: 600 VSHYIGVLNDVTEAKRYQEELERQANFDTLTGLPNRNLLQDRLGQGIAVARSKDERFAVA 659 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +DN ++++ G + + + R + + + +L G + +L+L G +T + Sbjct: 660 LLDLDNFKYVNDSLGHTLGDALLIEVARRIESSVPALATVSRLGGDDFVLLLPGVKTAEQ 719 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 L + + ++ + + T L + + + ++ LL Q+ A Sbjct: 720 LDLALKNVTDQLNQPVELSGTELFLSASIGCCFYPDDGSSVDELLSNADTAMYQAKALGK 779 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 + ++ + ++V L +R A+ Q +L +Y QP + G++ +L + Sbjct: 780 SQ-VRCFALHMNDRVQRRVELEGALRRAIAQDELTMYYQPQLDLQSDRLCGFEALLRWRR 838 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQ 586 + +++P +F+P+ + L D V+ ++ + + + P ++N+ L+L + Sbjct: 839 GER-LISPLEFIPIAEETGLIREIDRYVIRAVFRQVEEWRAEGLDPGEVAINISALSLQE 897 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 I I + P A+ LE+TE N +++ + +L + +IDDFGTGY Sbjct: 898 AGIVPYIAAEMASRRLPPDAIKLEVTESLLMKNVDTAQQVMSELKALHLKWSIDDFGTGY 957 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 + L+R D +KID F+ D+ N +A + R+I +A++ ++V+AE VE ++Q Sbjct: 958 SALSYLRRYPFDQLKIDKSFIDDVNVNPENASMTRAIISMARSLRIAVIAEGVENREQLG 1017 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L + G +QGY P Sbjct: 1018 FLVEAGCDQIQGYYYSPPLTAE 1039 >UniRef50_C6E953 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=C6E953_GEOSM Length = 953 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 97/581 (16%), Positives = 215/581 (37%), Gaps = 21/581 (3%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + L+S + N L + I + R A + + A++ Sbjct: 363 LEGLVSAELIEINGNPYLLTLFKDISERKRLEEDRARLAAIVESSDDAIMAVDREGAITS 422 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + V + F++ ++ + + + + Sbjct: 423 WNAGAEKMFGYCAQDMKGVHLSFLVSPEKKEQVTCLNDGIRSDGAVT---HCEVVHVTRG 479 Query: 286 ETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 ++ ++ ++ + S ++ + R + QA D LT LPN + Sbjct: 480 GSQIYVSLTMSPIKSADGGIVGTSCIARDVTERTRMEEIIKHQAQHDTLTDLPNRKLFGD 539 Query: 343 --------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 A + + +D+ + ++ G ++++ + L ++E++ + Sbjct: 540 FLNLELAQARRNRKSLAVLFMDLDHFKKVNDSLGHAAGDRLLQAVAQRLKRCVRESDTVA 599 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E +++ + +V + L + F + ++ Sbjct: 600 RISGDEFNVLMPDLTQTDDVGIVVGKIMGVFRTPFVLEGAELKVTTSVGVSMFPDDGDSA 659 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 Q LL + + + ++ +T + + +R A+ + +L L QP+ Sbjct: 660 QELLQKADGAMYVAKQTPGN-SYQFYNGEINARTVARQNMERRLREAVSKDELDLVYQPL 718 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + E G + +L + G++ P +FLP+ + VL + + + Sbjct: 719 LSLESGEIVGAEALLRWHHPEHGLLLPAQFLPVAEETGAIVPIGEWVLFNACRQMRLWQS 778 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 +VNL Q N +R + + P ++ L++TE+ N S+ N+ Sbjct: 779 QGFDLSVAVNLSNREFHQPNFIDLAMRALSQSGLDPASLELDVTEKAIMDNPAFSLRNMR 838 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +L G ++DDFG G ++ R+K L +KID F++DI+T D +V ++ ++ Sbjct: 839 RLTDIGVAFSVDDFGVGASSLSRIKELPIAKVKIDRSFIRDILTEPNDLDVVSAVICMSH 898 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + V A VE+ +Q AL+ G +QG LI RP P + Sbjct: 899 SLKMRVNAVGVESAEQLALVGSFGCDEVQGDLISRPLPPHE 939 Score = 45.4 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 15/193 (7%), Positives = 39/193 (20%), Gaps = 7/193 (3%) Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 I + + +L + + ML ++ + Sbjct: 85 ATIVAVTAHSETSYLLSAIEIGMDHYVLKPVNYPELFHVLDRIAEKIMLKRLVSEQVERI 144 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-PYENDFIAGYLVPVFFIIFT 252 + + + L E + +A + ++ Sbjct: 145 RRREQQLSQAER--ITHLGSWEWNLESGETVWSDELYRILGLEPESVAATFESLLRMVHP 202 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC--LLYMVR 310 + L S L + Y L+ + L + S ++ Sbjct: 203 ADRETMEKAVQQLRETGSALGIQYY--RLLRADGETRIVRGQLESVRDGSGRQTVIGACH 260 Query: 311 IYHRSEWLNRRWH 323 +W Sbjct: 261 DVTELKWAEAALR 273 >UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5L4_9RHOB Length = 854 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 111/633 (17%), Positives = 218/633 (34%), Gaps = 26/633 (4%) Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 ++ + +G+ + L +F F + + +L + + Sbjct: 207 LFSDINRDHTAAFLGVLALVILAATFVVFRMGLRAERLQTIYEMARKHQAALQHKNVELS 266 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE-NDFI 239 + + R + +A L + +L + Sbjct: 267 AEISHRQIVEHDLKTKSEELDRTNENLKIAATAFESQEGMAVLDMGGRILRVNAALARLM 326 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + +F + L L A+ C + SL F L+ + Sbjct: 327 GCEPNSLLGRLFEEMIVDEEAGGLGLNTALREGCPWKGDVRTKAVSAAGASLWFTLSPVM 386 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEA 348 ++ R+ A D LT LPN + Sbjct: 387 SDKGLPTSMIGTFYDVSDRRKAERQIKRLAFYDQLTGLPNRHLATDRTIQAMRTNAQSGE 446 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G + ++++ + + + + + G E +++L Sbjct: 447 FGALLFIDLDQFKRLNDTLGHDVGDKLLKAVADRISRRLGGDSTVARFGGDEFVVLLPTL 506 Query: 409 ETEGR---------LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 +T +V + + + F ET +L + Sbjct: 507 KTVIERDAALLAEHAAELVLRIFKQPFQLEGYEHNCSTSIGIALFSAPLETFDDILKRAD 566 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGE 517 ++ + + + ++V L +RTA+D+G+ + QP N Sbjct: 567 IAMYEAKGAGGN-VIRFFDPEMQRVVREEVSLDADLRTAVDRGEFEFHLQPQINRFGTVV 625 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRF 575 G + +L G+++P F+P+ + L VL+ K L+ Sbjct: 626 GAEVLLRWPHPVRGLVSPGVFIPIAEKSGLIVPLGNWVLDCAAKVLSNWAAKELFSDINL 685 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 S+N+ L ++ ++ +R+ P+ + LEITE +N + ++ + L + Sbjct: 686 SINVSANQLHSEDFVETVLGAIERHGARPRRLKLEITESLLVNNLDDAIRKMTALQQHEI 745 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++DDFGTGY++ LK+L D +KID FV D+ N DA I I L + L V+ Sbjct: 746 LFSLDDFGTGYSSLSYLKQLPLDQLKIDRSFVSDLPQNKNDAAIAEMIVALGRTLGLHVI 805 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET++Q+ L +G QGYL G P PL Sbjct: 806 AEGVETEEQKGFLEGIGCDQFQGYLFGVPMPLD 838 >UniRef50_Q2W5V0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W5V0_MAGSA Length = 820 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 100/568 (17%), Positives = 177/568 (31%), Gaps = 20/568 (3%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + R+ Q L + ++ ++ Sbjct: 244 RMGGDSVRVTSIRDLTQSKKAEASVRLLSQAVEQSPVAVAVVGGDGMVQYVNSAHASLTG 303 Query: 241 GYLVPVFF-IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 V + L GK + + L + T + + Sbjct: 304 HSSSAVVGKPLSALYPGKAGAMLGDFWRTLLGQGELQGELQVNRQDGTWQWQQVHGSKVA 363 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 L + + RR QAL D LT LPN + Sbjct: 364 TPGEEGTHYLLQIEDVTLRKDQERRLQHQALFDGLTDLPNRVHALDRLAREIDMARDHGR 423 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + +D + ++ G + L + + + G E L+++ Sbjct: 424 KVGLLFVDLDGFKAINDSLGHEYGDELLVLAAERLRQAAGDGGVVARFGGDEFLVIMGDM 483 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E + + S+ + L + + T Q LL Q+ Sbjct: 484 EDGAAAGEVAAAIVDRFSQPFTISRRDLISTASIGLALYPEDGRTQQTLLRNADIAMYQA 543 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 ++ + ++ + +R A+ L QP+ G + + Sbjct: 544 KLAGRNR-FCFFTSRMNEEAEARLRMEGELRRAVGTDQFHLVYQPLVAVATGRAVGVEAL 602 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMP 581 L + G + PD+F+P + VLE+ + D R +N+ P Sbjct: 603 LRWSNPELGNVPPDRFIPQAETCGVIVAIGRMVLETACRDARRWVEDGHADLRLCINVSP 662 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 G + +SP + LEITE + + L G +++IDD Sbjct: 663 RQFQDAGFLGDVRAALAGSGLSPANLELEITEGLLLTERGDVDTLLRTLTDMGVKLSIDD 722 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+R D +KID F+ ++ ++V +I +A L V+AE VET Sbjct: 723 FGTGYSSLSYLERFPFDTLKIDRSFMIGMLERQERKVLVETIVAMASGLGLEVIAEGVET 782 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q A L + QGYL RP P D Sbjct: 783 AEQMAHLAAINCDIAQGYLFSRPVPAGD 810 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 12/128 (9%), Positives = 34/128 (26%), Gaps = 4/128 (3%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLC--TPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + E R LS +A ++ + F + ++ + Sbjct: 144 QTRKTLGDSEDRFRRLSDVATEAICIHFQGKIIDMNKAFETLFAYSRDELLTMWAWDVID 203 Query: 260 YPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEW 317 ++L + V+ Y ++ + + + + +R +S+ Sbjct: 204 PRDISLAKSMVAQQYEAPYEVRGIRKDGSVFPMEIHSKHSRMGGDSVRVTSIRDLTQSKK 263 Query: 318 LNRRWHLQ 325 L Sbjct: 264 AEASVRLL 271 >UniRef50_A4VKH7 Sensory box/GGDEF family protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKH7_PSEU5 Length = 708 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 118/558 (21%), Positives = 206/558 (36%), Gaps = 28/558 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY---ENDFIAGYLVPVFFIIFTL 253 R + E R ++ A+ + Y Y + Sbjct: 137 ITAQRAVLEALEQAELRYRSIFENASEGIFQSTRDGRYLAANPALARIYGYDSASELVAD 196 Query: 254 GVGKLRYPFLNLTWAVSTLCL-------LNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 R ++ + L LN+ + T ++ V+ + + Sbjct: 197 LADIERRLYVQPGRREAFCQLMEQHGEVLNFESEVYRRDCTRIWISENAHVVRGPNGEFI 256 Query: 307 ---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 V+ + ++ QA D LT LPN L EQ ++ + Sbjct: 257 CYEGTVQDISERKHYQQQLERQANHDLLTGLPNRILLNDRIEQGLARAARLGYYLTLVFI 316 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +DN +F++ G + ++SI L ++ ++ + ++ G E +LVL + Sbjct: 317 DLDNFKFINDGLGHVAGDELLKSIAARLAGSLRGSDTVARVGGDEFVLVLGDHYRISTVI 376 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ + R + +G F + E Q LL + Sbjct: 377 SLLERVLNEIRRPVTLAGREFQVGASLGVAMFPDDGEDAQTLLKHADIAMYAAKKRGRN- 435 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDG 530 ++ +++ L +RTAL++ + ++ QP + G++ + D Sbjct: 436 NFQFFTHDLNRIADERLNLEAAMRTALERDEFAVHYQPKVDAQRRIVGFEALARWTHADL 495 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNI 589 G++ PD+F+P+ + L L VL + +VNL PL L ++ Sbjct: 496 GVIGPDRFVPVAEESGLIMPLTLAVLRRAFSDARRWNAGRQVPLLVAVNLSPLLFLGDDV 555 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R++ + +SP V LEITE + ++ + GFR+A+DDFGTGY+ Sbjct: 556 VERVMAVLDEVGLSPLLVELEITETVFLGDGSRAVSILADFKARGFRLAMDDFGTGYSAL 615 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+R DIIKID V + AMI R+ L K+ +VVAE VE Q L Sbjct: 616 GYLRRFPLDIIKIDRSLVTGLEQEDEVAMIARAAISLGKSLHKTVVAEGVENAAQFEFLR 675 Query: 710 KLGVQYLQGYLIGRPQPL 727 G QGYL+ RP P Sbjct: 676 HNGCDEFQGYLLSRPLPA 693 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 95/439 (21%), Positives = 175/439 (39%), Gaps = 29/439 (6%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 R A D LT LPN R + + + L +DN + ++ G Sbjct: 303 RTKNRLRKMAYYDALTSLPNRRLFTEQLSLLLKLAQRNKQTLALLFLDLDNFKRINDSLG 362 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLY------------QLPGSELLLVLSGPETEGRLQH 416 +R + + L +++++ + +L G E +VL+ + + Sbjct: 363 HSAGDLLLREVGQRLSKCVRDSDVVAHYADPTAKIDVSRLGGDEFTVVLNDLDAPESVGV 422 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L S + + L + + ++ LL + A Sbjct: 423 VAERLILALSEPMLIDGHELVITPSIGIAIAPEHANEVEGLLRCSDTAMYHAKASGK-ST 481 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 E + ++ L N +R A+D +L+L+ QP + + G + +L + + Sbjct: 482 YLVYESSMEEAGLDRLTLENDLRKAMDNDELVLFYQPQVDTRSGKVVGAEALLRWMHPEQ 541 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNI 589 G++ P KF+PL + L V+ K + T +VN+ L + Sbjct: 542 GLIPPFKFIPLAEEMGLIGEMGDWVIREACKQVQTFAKKGVSLPKVAVNVSALQFT-PSF 600 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R+ + + P + LE+TE + +S+ + +L G ++IDDFGTGY++ Sbjct: 601 TRRVKSILDELAVDPATLELELTEGVVMGDTNASVQALAELKDLGVSLSIDDFGTGYSSL 660 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L R D +KID FV + + A +VR+I +A++ L +VAE VET +Q + Sbjct: 661 SYLSRFPLDELKIDRSFVIEANNSEQGASLVRAIIAMAQSLGLELVAEGVETDEQYEFMT 720 Query: 710 KLGVQYLQGYLIGRPQPLA 728 G +QGY+ +P P Sbjct: 721 TAGAHVIQGYMFSQPVPAE 739 >UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJP5_9GAMM Length = 1092 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 99/543 (18%), Positives = 190/543 (34%), Gaps = 31/543 (5%) Query: 216 TLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTW 267 + V++ +L + GY + + N+ Sbjct: 536 VVFENTREGVVITDATAHILSVNRAFTELMGYTQDEVVGRTPKMFQSGRHDQAFYANMRR 595 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHL 324 + T + + + + + + R + Sbjct: 596 QLETEGHWQGEIWNRRKTGEIFPELQSITAVRDDQGRLTHYVSVFADISRLKASEAELDF 655 Query: 325 QALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A DPLT LPN R L + + + +D + ++ G + Sbjct: 656 LAHHDPLTELPNRRLLRARLAQAIALMRRRNGLLAILIIDVDRFKDINDSRGHAAGDRLL 715 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW-NNTG 432 + + L + + + +L E ++ + + + + Sbjct: 716 KIVADRLQAGQRGTDTVARLASDEFAVLADNLAHVDDAALVAEDILREVGRPVDLGDGVE 775 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 ++ F + + LL Q ++ + + +++ L Sbjct: 776 FEIAATIGIAVFPDHGADAETLLQQAGTALSRAKEDGRG-GYRYYSDAFTEAARERIDLN 834 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R A++Q L ++ QP + G + +L + G ++P +F+P+ Q L Sbjct: 835 ARLRRAIEQDSLEVHYQPQYRVSDGVLIGAEALLRWTDPELGPVSPGRFIPVAEQTGLIV 894 Query: 550 RFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VL +L R +VN+ L + I ++ L + + + + Sbjct: 895 ELGDWVLRRVLAQGQAWRDAGYPAVRLAVNVSALQFQRVAIDHQVADLLEGHGYPAKYLE 954 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE S+ E + +++L + G A+DDFGTGY++ +LKR D +K+D FV Sbjct: 955 LEITESALMSDPERARRILQRLRERGVSFAVDDFGTGYSSMAQLKRFPVDTLKVDKSFVD 1014 Query: 669 DI---VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + + D I R+I L LSV+AE VET++Q L +LG + QGYL RP Sbjct: 1015 GLAAGAHDADDRSIARAIVALGHGLGLSVLAEGVETREQLGALRELGCDHYQGYLASRPL 1074 Query: 726 PLA 728 P Sbjct: 1075 PAE 1077 >UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 Tax=Yersinia RepID=A7FEI0_YERP3 Length = 855 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 97/572 (16%), Positives = 202/572 (35%), Gaps = 29/572 (5%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 ++ +I R A E+R ++ A+ + Sbjct: 277 IIGLTAWLVIRRAISGAKATDRSRAALAASEERFRHVAESASDWLWETDAELQVTY-LSP 335 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--------NQNFLQGVETEYSLA 292 +L+ + + L ++ T + + ++ Sbjct: 336 RFLIISGWSVDHWLGRHLDSLLNCDITSLRTWLQHTHLTDSRNELQCTYFSAKGSKRVCR 395 Query: 293 FILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--- 347 +I V R +R +L D LT LPN + + E + Sbjct: 396 IHAKPIIQQGEIVGFRGTASDLTREIEAEKRIEHLSLHDALTGLPNRTLMTEFLENKLHN 455 Query: 348 -----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + +D + ++ ++G + + + L +++ + + + G E + Sbjct: 456 LAAVEHPLVILNVNLDKFKPVNDNFGHVTGDQVLYQVAERLRSCLRDKDLVSRQGGDEFI 515 Query: 403 LVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L++S + ++ + + N + +G + + LL Sbjct: 516 LIISDLSSSYEIELLCARVITRIQMPYVINEQEIYLGASIGITLAPQDSMQAEELLRFAD 575 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 ++ ++ + +++ L +R A+ + + LY QP + + Sbjct: 576 IAMCEAKNSARNR-WRFYASEMNDRLMQRIELEKFLRLAVKKSEFCLYYQPRYRTDDMQL 634 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G + ++ G++ PD+F+ L + L L + T P S Sbjct: 635 IGAEALVRWNHPVLGLLMPDQFIALAEETGLITAISDWTLLQACQDAMTWPT---SLIVS 691 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + + + R+ + + + LEITE +A+ ++ + L G R Sbjct: 692 VNISAIEFRGQCLIERVRQALLVTGLPSHRLELEITERIMIEDADGALKIMTALKTLGIR 751 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTGY++ L R D +KID F+ + + IV I +L A S++V+A Sbjct: 752 LSIDDFGTGYSSLNYLHRFPFDGLKIDKSFIDKLTESHEGQSIVEGIINLGHAISMTVIA 811 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET +Q L L +QGY + +P P+ Sbjct: 812 EGVETAEQLTYLQSLHCDEVQGYFLAKPMPVE 843 >UniRef50_Q5P4J2 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4J2_AZOSE Length = 948 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 110/619 (17%), Positives = 208/619 (33%), Gaps = 23/619 (3%) Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 LV P +GS P S F ++ + T I L ++ Sbjct: 318 ALVHPRLDIGRAIGLGSLVLLPPLASGFVLARTQLWIP---PAAATIGFIIGYLGWFAVD 374 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYENDFIAGYLVPV 246 + S + + A T+ L + T + Sbjct: 375 LRRSRRGLRHARQDADATLRSIADAVVTVDDDCRIVLMNPVAERLTGLPLAGAQQRRLGE 434 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 FT ++ + L + T +L ++ + + + Sbjct: 435 LLDTFTEQRAQIDETLGVCLQQ-RRMIRLPEPIAWRMPDGTVCALRLTISPIGERAEGAV 493 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRID 358 + R +A D LT LPN L + + +D Sbjct: 494 LAFNDVTEALAATSRLEHEATHDTLTGLPNRALLLDRLHHALAQADRRCTMIALLFVDLD 553 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + + L ++ + + + G E ++++ + + + + Sbjct: 554 RFKRINDSLGHHAGDRVLEIVAERLTAAVRGGDTVARWGGDEFVVLMENLDDQPAVAAIA 613 Query: 419 NI---LNSRQIHWN-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + L R + T L + G + LL ++ + Sbjct: 614 HKMIELLERDVEAEPGTNLALSCSIGIGVGPRDSADAGTLLLMADRAMYRAKRQGGG-SY 672 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 ++ + ++ + + +R AL + L+ QP + G + ++ + DG Sbjct: 673 TFYSPEMNTWSRDRLKMESALRAALQNREFELHYQPQIDIRSGRLVGLEALIRWRRADGE 732 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIA 590 ++ PD F+P + L V+ A + +VN+ N+ Sbjct: 733 LIRPDAFIPAAEESGLIRGIGDWVIREATSQAARWKSEGLLPVPLAVNVSAQQCSDMNVV 792 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + ++P + +E+TE A +AE + + + G +A+DDFGTGY++ Sbjct: 793 DTIRSALEDSGVAPAMLKIELTESTAMHDAERVAELLSSIDRLGVGVAVDDFGTGYSSLS 852 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR +KID FV DI ++ DA IVR LA + ++VVAE VETQ Q L + Sbjct: 853 LLKRFPISELKIDKSFVHDITSDADDAAIVRGTIALAHSLGMTVVAEGVETQAQLRFLAR 912 Query: 711 LGVQYLQGYLIGRPQPLAD 729 QG L P P + Sbjct: 913 HRCNIAQGLLSSPPLPADE 931 >UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q7Q8_SULNB Length = 656 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 118/628 (18%), Positives = 239/628 (38%), Gaps = 32/628 (5%) Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 L+ +++ +K TFF + + L ++ Sbjct: 25 FSLLNSAIAVILIFISFLTISMIVKEETFFASF-----LCVYIFLSIGLVYLLRKSKDNY 79 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 ++++ L A S+ + +L + L +V + Sbjct: 80 QIVIPVFTIISLILLLTAISIFPNEHERVAWFLVIIIFSFFLGGRQLGVAMTLMSIVGII 139 Query: 248 FI--IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV-LISFSVC 304 I +G+ + + + ++ + Y + + Y L L + + Sbjct: 140 SIDYFVDMGLSFYSLMLIIVIILIGSVLVDLYEKRDKTAKKRLYKLNNSLELRIKEEIEK 199 Query: 305 LLYMVR----IYHR----SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + + A D LT LPN Sbjct: 200 RILIYEKSNLDLKESSKKLKQQKDAYKKLAYYDILTKLPNRVLFYDRLKHSIDKSKRNNT 259 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +DN + ++ G + + ++ + L +++++ L +L G E L+L Sbjct: 260 KLAVLFLDLDNFKEINDSLGHHVGDNVLKILATRLQKRLRKSDTLARLGGDEFTLLLEDL 319 Query: 409 ETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E + + + S+ I L + + + + + LL + Sbjct: 320 EDLSNIGEISQSLIQVISKPIKIKEHTLYVTVSLGISIYPDDGQDTESLLKCADAAMYSA 379 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 L ++ ++ + +++ +IR ALD + ++Y QP+ + + G + + Sbjct: 380 KNEGCNL-FHFYKQEMTVKALERITFETSIRHALDNDEFIVYYQPLIDIRTNQLIGLEAL 438 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMP 581 L + G+++PDKF+ + ++ + +VLE + L P R +VNL Sbjct: 439 LRWQHSEKGLLSPDKFIHIAETSSIIIQIGERVLEDVAAQLEIWHEKGFNPERIAVNLSV 498 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + I + ++ P+ + LEITE ++ + Q+ G + IDD Sbjct: 499 KQLRHHGLISIISDILEKTKFRPKWLELEITESYTMQKPVQAIRLLNQIKDLGVDLTIDD 558 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK++ + +KID F+KDI N D +V +I +AK+ +L VVAE VET Sbjct: 559 FGTGYSSLSYLKKIPVNKLKIDRAFIKDITENKDDKALVSAILSMAKSMNLDVVAEGVET 618 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q+ L LG +QGYL +P ++D Sbjct: 619 EEQRQCLEALGCYKIQGYLFSKPMSVSD 646 >UniRef50_Q984Y8 Mll7787 protein n=2 Tax=Mesorhizobium RepID=Q984Y8_RHILO Length = 724 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 112/563 (19%), Positives = 193/563 (34%), Gaps = 40/563 (7%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT---PYENDFIAGYLVPVFFIIFTL 253 RR + +R + +L+ F+ Y V Sbjct: 157 ITEQRRAEQDLKEQHRRFDAALANMSQGLLMYDADGKMIVRNRRFLELYNVTAADFPLGT 216 Query: 254 GVGKLRYPFLNL--------------TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 L + T A + ++ +L + + Sbjct: 217 THRDALEKLLEIGIYQQIDVDSEVAKTEACLVVAKMHSAYRYLT-DGRT--VLVTRQPMS 273 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------QEAGKSFC 353 + R A D LT LPN + + + Sbjct: 274 G--GGWVVTFDDVTERRRTEERMIHLAHHDTLTGLPNRSMFRERLDLALEDAAAPPLAIF 331 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLSGPETEG 412 L +D + ++ +G ++S+ L + E + + + G E +++ + Sbjct: 332 SLDLDRFKAINDTWGHPAGDWLLKSVAERLQRCLHNETDVVARFGGDEFVVMQFNSKGIA 391 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + ++Q + + +G F + LL ++ + Sbjct: 392 DAEKLAKRIVEAIAKQFRDKSRDMHIGISLGIAVFPQDGRDADTLLKNADTALYRAKSEG 451 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 L E + + L + AL + + L QPI N E G + ++ Sbjct: 452 RNL-YRFFEPAMDAIVQARRALEVDLDAALPRQEFDLDFQPIMNIASGEIIGAEALMRWH 510 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 G + PD F+P+ + L L A+ P G R +VN+ + L Sbjct: 511 SPARGTVAPDAFIPVAEETGLIVPLGEWALRKACAAAASWP---PGLRIAVNVSAVQLKS 567 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 A +I + + LEITE +++ + + QL G RIA+DDFGTGY Sbjct: 568 GGFARSVISALAFSGVPAGQLELEITETVLMDESKAVLKTLRQLRDLGIRIALDDFGTGY 627 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+R D IKID F++D+ N A IVR+I L + V AE VET+ Q Sbjct: 628 SSLAYLRRFPVDKIKIDRSFIRDMG-NRDTAAIVRTIIGLGNELGIVVTAEGVETEVQLD 686 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 +L G + QGYLIG P AD Sbjct: 687 MLRDNGCEEAQGYLIGVPSKAAD 709 >UniRef50_D2L6G6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6G6_9DELT Length = 814 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 109/577 (18%), Positives = 209/577 (36%), Gaps = 24/577 (4%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRD--IAPSLGKEKRAFTLSWLAALSVLLLLL 230 + L ++ + + R D + F + L ++ Sbjct: 224 LALSMAPLRLSGAAHALLEARPASLAGCRPDHPETDLSLSAEGFFVIDADGRLRLVNAAC 283 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + + +P+ + + L + + + G + Sbjct: 284 TRVFGLCSVPEPGLPLEAALPSELATSLARDASRVIAWNEPVKKEMTTT--ICGTDKTLL 341 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-- 348 L+ + S +V + L + A DPLT LPN Q Sbjct: 342 LSLFPMGIDEASRLAGGLVSDITDRKHLENQLAHMAFHDPLTGLPNRSLCLDRIRQAIER 401 Query: 349 -------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + L +D + ++ G M + + R L ++ + + +L G E Sbjct: 402 SKRRENYQYAVIFLDLDRFKVINDSLGHHMGDRLLEGVSRRLRDCVRGLDTVARLGGDEF 461 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +++L + + +V + S + + + + + LL Sbjct: 462 VVLLEETGSNREIIRIVKRIRTAISDIFVLCDHDIHVTCSMGIVISPALYDKPEELLRNA 521 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 + ++ + + + L N +R AL +G+ L QPI ++ Sbjct: 522 NIALHRAKGEGRNR-FKVFNTRMLEDAIRLMDLENDLRLALKRGEFFLDYQPILALRDRR 580 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---G 572 G++ ++ + G+ +P +F+P+ L L VL + +A Sbjct: 581 LTGFEALVRWRRPGKGVASPMEFIPVAEDTGLIVPLGLWVLGEACQTMAAWQKRFPGAEH 640 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 SVNL L Q + + R+ + + P+ + LEITE N E S+ +++L + Sbjct: 641 LSMSVNLSAKQLAQPTMVEEVERILRATGLDPRTLKLEITESVIMDNPEVSILRLKRLKE 700 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G R+++DDFGTGY++ L+R D +K+D FV DI + + IV ++ LA + L Sbjct: 701 LGVRLSVDDFGTGYSSLSYLQRFPIDTLKVDRAFVSDIEAS-ENRKIVGAVVALAHSLGL 759 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE VE + Q +L + QG+L RP D Sbjct: 760 DVVAEGVELETQSDVLEGFNCEAGQGFLFSRPVCGED 796 >UniRef50_A4BJS0 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BJS0_9GAMM Length = 857 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 110/529 (20%), Positives = 196/529 (37%), Gaps = 26/529 (4%) Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 L A L ++ + +F + L + + L + Sbjct: 315 LLANQAFLKSYRLSPDDYLKPEHYNVIFDSLSPATRQLLEEADQEAVESNQAVLLPEISW 374 Query: 280 NFLQGVETEYSLAFI-LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 SL L++ +L + + A D LT LPN Sbjct: 375 RL--PDGHHLSLEMRKLSIQYKGQPAILSVGVDITERKLHQEHIQHLAYHDALTDLPNRH 432 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + + + +DN + ++ G + + + L +E Sbjct: 433 LFLDRLDQALLRTQRSKQYGALIFVDLDNFKTINDTKGHLAGDAVLADVAERLKHAFREV 492 Query: 391 EKLYQLPGSELLLVLSGP-ETEGRLQHMVN----ILNS---RQIHWNNTGLDMGYGAAWG 442 + + +L G E ++ ++ TE + + L R L + Sbjct: 493 DTVARLGGDEFVICMTDLGRTEQEAYDIAHDRSVKLMDAMKRPFQTQGDQLIVSASLGLA 552 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F + T LL ++ + +E ++ + + + L R AL + Sbjct: 553 FFHDHSLTASELLSHADMAMYRAKETGKNRII-LFQEEMAEASERLLELKEDSRNALRRD 611 Query: 503 DLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L QP + G + +L G+++P +F+PL+ + +V+E Sbjct: 612 EFHLVFQPQVDARDRKILGAEALLRWTHPSRGMVSPGEFIPLLEDGEMMPLVGQKVIELA 671 Query: 560 LKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 LA + R S+N+ P Q + + + + + + LEITE Sbjct: 672 AAQLADWRKEGLIREDFRLSLNVSPQQFRQADFVSTVRTVLDEHDLPAYLIDLEITEGMI 731 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N + ++ +++L + G +IDDFGTGY+N LKRL D++K+D FV+DI + D Sbjct: 732 IDNIDHTVAAMKELREMGIHFSIDDFGTGYSNLNYLKRLPLDVLKVDQSFVRDIEHDAND 791 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 IVR+I +A L+ VAE VET+ Q LL +LG Q QGYL P Sbjct: 792 TAIVRTIIAMADQLKLNTVAEGVETEDQLTLLRELGCQVFQGYLYSPPL 840 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 115/584 (19%), Positives = 201/584 (34%), Gaps = 23/584 (3%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + +SL + F + I S A++ A + + Sbjct: 713 LWINLTVSLVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEG---IFVTDLK 769 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 +L + + V + R ++ L V T+ + Sbjct: 770 GSILAVNPAFSQITLYEAAEVLGRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRR 829 Query: 284 GVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + ++ + + + R + ++H A DPLT LPN L Sbjct: 830 RDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLL 889 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + L +D + ++ G +R++ L + + Sbjct: 890 RSRLDHAIERARRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGT 949 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQ 448 L +L G E + V+ + + + + + +G F + Sbjct: 950 LARLGGDEFVAVIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDG 1009 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + LL Q ++ + + ++ L +R AL+QGD LL+ Sbjct: 1010 DNPDTLLQHADTALGQVKGAGGGAYGFY-TRTLTERISARLGLEAGLRHALEQGDFLLHY 1068 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP+ E EG + ++ DG ++ PD+F+PL L VL + + Sbjct: 1069 QPLIALGTGEVEGVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQR 1128 Query: 566 HPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL P I + R+ ++ + + LEITE ++ Sbjct: 1129 WRSQGMPLTVLAVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAE 1188 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L G R+AIDDFGTGY++ L+R D IKID FV+DI + I +I Sbjct: 1189 AQMTGLKHLGVRLAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATII 1248 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + L V+AE VET Q L + QGYL RP A Sbjct: 1249 AMGRTLKLHVLAEGVETTDQLDFLSRKQCDSAQGYLFSRPITAA 1292 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 13/151 (8%), Positives = 37/151 (24%), Gaps = 12/151 (7%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDF 238 + ++ RR E R AA+ + L ++ Sbjct: 599 FSRLELLARADGLIADHRRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCD 658 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC----LLNYNQNFLQGVETEYSLAFI 294 I GY + + +L + L + +++ + Sbjct: 659 IVGYPPDELLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLT 718 Query: 295 LAVLIS---FSVCLLYMVRIYHRSEWLNRRW 322 ++++ + +V + + Sbjct: 719 VSLVRDIHNAPAYFISVVENIQSRKEAELQL 749 >UniRef50_A1TMD5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TMD5_ACIAC Length = 687 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 116/672 (17%), Positives = 222/672 (33%), Gaps = 25/672 (3%) Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 +++ L ++V L + R L R + + Sbjct: 5 AVDVAWRSLFAGLREALWLVDAQ--SLDVVMCNRAAAELAGRPREAMEGRPVHLLANTPE 62 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI--YNMLFYYLTRMIVSPHF 195 + I ++ G ++V + AV L Sbjct: 63 DLAFWSQDLAGLRAGIHSYSGMLRPDGSLVPVDRRVAAVESPEGMPLLVLGMLDRSEQAS 122 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE-----NDFIAGYLVPVFFII 250 Q R ++ A + + + D + Sbjct: 123 IQDELERLLSELRATLDSAADGMLVCDMGGRVRAFNQRLAWLWNMPDDLLVRRDDAAVEA 182 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 + ++ T + + + +Y R Sbjct: 183 HMAAQVTDADAYRARLLGIAQFPEEETLDILHLRTGTVIERRSVPQMSHGRPMGRVYSFR 242 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEF 362 +R A +D LT LPN L + A Q G + + +D + Sbjct: 243 DLTLQHAAQKRIEQLAYSDVLTGLPNRLLLSRCVASALETARAQGGGFAILFIDLDRFKI 302 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + ++ + + L +++N+ L +L G E +L L + + + Sbjct: 303 INDSLGHLFGDRVLQLVAQRLRGCLRQNDMLCRLGGDEFVLHLDE-GDASMAEAVACRIL 361 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + G + + ETL L+ Q + + Sbjct: 362 EEMRQPFMLDGMGFSIQCSIGIALHPRDGETLDDLIKQADTAMYRVKERGRG-SYGFYHP 420 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 ++ ++ L + +R ALD+GD ++ QP + G + +L G ++P Sbjct: 421 QMNADMLSRMQLEHAMRQALDRGDFAVHYQPQVEMASGRVVGAEALLRWNDPGLGAVSPG 480 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + VLE ++ A +VN+ L Q R++ L Sbjct: 481 VFIPLAEESGYIVTLGAWVLEQAIREAAEWMRAGTPLVVAVNVSALEFRQSGFVERLVAL 540 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + + + LE+TE +A+ + L + G ++IDDFGTGY++ LK+L+ Sbjct: 541 LRSHGLPASLLELELTETILLQDAQEMAQRLAALAELGVGLSIDDFGTGYSSLAYLKKLR 600 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID FV+ + + D I+ +I + +A + VVAE VET QQ+ L L Y Sbjct: 601 IHKLKIDQSFVRGLPDDESDRAIIEAIVHIGRALRIRVVAEGVETPQQREALQALQCHYF 660 Query: 717 QGYLIGRPQPLA 728 QG+L+ P Sbjct: 661 QGFLVAPGLPAE 672 >UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNA1_9PROT Length = 650 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 111/619 (17%), Positives = 226/619 (36%), Gaps = 45/619 (7%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM---------------IVSPHF 195 + ++ ++ L A + L R+ +V + Sbjct: 25 ISGHFIVLLLSSLLFWNNIPPLIIAFGFISHLLILSRRLYLRNEYNKVRESLVDLVDINS 84 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 +RR + L + + LS+ L AG L + Sbjct: 85 WLSKYRRCM--FLSGLAFGLMIFFFDNLSIEYHFLILCISVGLSAGGLYTLGESFSIYAF 142 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 + L W V + L V Y+L+ + ++ Sbjct: 143 YVITMLGSALVWIVQQDADVYRIGTILIIVAIYYNLS-SGRRYANNFKQIILEQHSVSEY 201 Query: 316 EWLNRR-----------WHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 QA D LT LPN + + + Sbjct: 202 IKKQEEMQNELLEQKDILEHQATHDALTGLPNRILFNDRLEQSIQKAKRNDTQIALFFID 261 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D+ + ++ G + ++ + L +++ + L +L G E +++ + + Sbjct: 262 LDHFKEINDSLGHHIGDEVLKVVATRLNLVIRLEDTLARLGGDEFTIIMEDIKNIQYVIF 321 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + I NN L + F + L LL ++ + Sbjct: 322 FSQKILKVLLEPISVNNQNLYLSSSIGISLFPQDSTDLNNLLKYADTAMYKAKSEGRN-N 380 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDG 530 + ++ ++V+++ +++ A+ + + +++ QP + + G + ++ Sbjct: 381 FQFYSKEMTELAFERVIMVASLKQAIIKKEFVVHYQPQIDAKNKKLVGMEALVRWEHPTL 440 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNI 589 G+++P KF+PL L D+ V+E + ++ D P S+NL L Sbjct: 441 GLVSPAKFIPLAEDTGLIVDIDILVMEIAMMQVSEWRRDGLNPGILSLNLAIKQLNHDTF 500 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + +Y + + LEITE + + ++++ + G +IAIDDFGTGY++ Sbjct: 501 IIILKHNMSKYDFKSEWLELEITENDVMRKPKDAAVKLKEISELGIKIAIDDFGTGYSSL 560 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+L D +KID F++DI + D IV+++ ++K+ +L V+AE VET++Q+ + Sbjct: 561 SYLKKLPIDKLKIDQSFIRDIPGSEDDNAIVKAVIAISKSLNLDVIAEGVETKEQRDFVL 620 Query: 710 KLGVQYLQGYLIGRPQPLA 728 + G +QGY RP P Sbjct: 621 ENGCSKIQGYYYSRPLPAE 639 >UniRef50_B8KPF2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPF2_9GAMM Length = 609 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 96/448 (21%), Positives = 176/448 (39%), Gaps = 35/448 (7%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRH 366 + R A DPLT LPN R+ + + + + +DN + ++ Sbjct: 138 LKRQEDRLRYLAYFDPLTSLPNRRSFNEQLNRILKRSQRLNTFSALLFIDLDNFKRINDS 197 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKL------------------YQLPGSELLLVLSGP 408 G + I + L+ ++E++ + +L G E +VL+ Sbjct: 198 IGHGRGDRLLVEISKRLINELREDDAISYYSDSSAEEEHDGNTEIARLGGDEFTVVLADV 257 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 ++ + + S I + + + E + L+ + Sbjct: 258 LHTDDVERIALRIMKTLSEPIPLQTHNPVVTPSIGIAMYPQDGEDAESLVRNADTAMYAA 317 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 A E ++ ++ + + L +R A+ L L QP + + Sbjct: 318 KADGRA-CFRFYNEEMNARSVEHLKLEEDLREAMRTDQLELRYQPQVETVTGAVVSLEAL 376 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMP 581 + + G+++P F+P+ VL+ + + R VN+ P Sbjct: 377 VRWKHPERGMISPADFIPVAESTGQIIELGEWVLKEVARHCVYWDSIGLASFRVCVNISP 436 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L Q ++ I R + P + LE+TE ++ ES++ + QL G +A+DD Sbjct: 437 LQFNQPDLLHYIKGFLGRSGLDPHRLELELTESAIMTDGESNILKLSQLKSLGLDLAVDD 496 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+R + +KID FV D+ + A IV +I LAK ++ +AE +ET Sbjct: 497 FGTGYSSLSYLRRFPINTLKIDQSFVADM-NSADGAAIVDAIIALAKTLNMRSIAEGIET 555 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q A L K GV +QG+ RP D Sbjct: 556 EEQLAYLAKRGVDLMQGFYFARPLYPED 583 >UniRef50_A8URG3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URG3_9AQUI Length = 570 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 87/470 (18%), Positives = 171/470 (36%), Gaps = 17/470 (3%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + + + ++ L + + + + L A D LT Sbjct: 88 GVWRGEVWGVSRGGSPFTAETTL--VKADEENYIAIFLDSTDKRSLEASLRSLAYYDALT 145 Query: 333 LLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN L Q + IDN + ++ G + +++ L Sbjct: 146 GLPNRALLYDHLSQFLFQAKNENKKLAVVFFDIDNFKLINDTLGHEVGDSLLKAFAHRLT 205 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI-LNS--RQIHWNNTGLDMGYGAAW 441 N + + E ++VL ++ +V+ +NS + + A Sbjct: 206 SHFPPNTMVARFGSDEFVVVLESIAGIDDVEEVVSGFINSVTTPFFIEGQKIYVTVTAGI 265 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + Q LL + + ++ + +++ L +R AL++ Sbjct: 266 SLYPIDGGDPQTLLRNADIAMHHAKELGK-SSFKFFTNELNLKVSERFTLQAELRDALER 324 Query: 502 GDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + +LY QP G + ++ D G++ P +F+ + + +L VL Sbjct: 325 EEFVLYYQPQFELRTNTIVGVEALIRWHHPDRGVILPGRFMHVAEETDLIVPLGYWVLRR 384 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + + +VN+ + +++ ++ + P + +EITE Sbjct: 385 ACEDGRRLVENGFPLKVAVNISAKQISEEDFLEKLRDILNATGFDPNLLEVEITESVLMK 444 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N + + + +L K G IAIDDFGT Y++ LK D +KID F+ D++++ D Sbjct: 445 NKQQAARVLRELKKMGISIAIDDFGTSYSSLNYLKYFPVDKLKIDRSFIGDVISDPNDVA 504 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I +I +A L AE VET++Q L QG+ P L Sbjct: 505 IATTIIAIAHNLGLKATAEGVETEEQLIFLKLWQCDEAQGFYFSPPITLD 554 >UniRef50_C1I4R6 Diguanylate cyclase/phosphodiesterase domain 2 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4R6_9CLOT Length = 960 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 99/575 (17%), Positives = 197/575 (34%), Gaps = 30/575 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYEND 237 + L + + E+R A + + + Sbjct: 380 YDELNVVYEELAATEESLEMQYNEVQASEERYKLAVDGANDIIWEYDFRNKEHYLSNKFE 439 Query: 238 FIAGYLVPVFFIIFT-----LGVGKLRYPFLNLTWAVSTLCLLNY-NQNFLQGVETEYSL 291 + GY + + + L ++ Y + + Sbjct: 440 GLLGYTIYNSENLIDTFKKIILKEDLGKVLSLFEEHLNRKSSYFYVECRVVDRFNNIKWV 499 Query: 292 AFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA 348 LI + + + + A D LT LPN + E Sbjct: 500 FIRGKALIDSENNPVKISGSISDITERKKAEEKIETLAFYDQLTGLPNKHMFLDKIDDEL 559 Query: 349 GKSF--------CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + + IDN + ++ G ++ I + + L+ +E + +L G E Sbjct: 560 LRGLKNEYIGVAFLIDIDNFKNINDTLGHDYGDEFLKCIAKEFIKLLDNDEFICKLDGDE 619 Query: 401 LLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 L+++ + + M N + + + LL Sbjct: 620 FLILMLDVNGKAEAEEMANKILELFKNPFKVKEKNIFTSVSIGISIIPNDARNKSELLKN 679 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NK 514 ++ + E ++ ++ L++ +R A+ + + L QP + Sbjct: 680 SDIAMYKAKENGKNR-YLFYRESMAKDIVRKSQLIDGLRNAICKSEFELLYQPQINMNDS 738 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GP 573 + G + +L G ++P +F+PL Q L VL++ Sbjct: 739 KVIGAEALLRWRSNSFGNVSPIEFIPLAEQSELIISIGKWVLKNACIKNKEWIDKGITPM 798 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ + L Q N + + + + + +EITE +N E ++ + + Sbjct: 799 TIAVNVSVIQLYQSNFLNTVRDILDESGLPAEYLEIEITESIVMNNIEENLKVLNDIKDL 858 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +IA+DDFGTGY++ L+ L D +K+D F+ +I + D +IV I LA ++ Sbjct: 859 GVKIALDDFGTGYSSLSYLRLLPIDKLKLDKSFIDNIHISENDRVIVECIIKLAHEMNIL 918 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VE ++Q +L+K+G +QGY +P Sbjct: 919 VVAEGVEIKEQFDILYKMGCDRIQGYYFSKPISPD 953 >UniRef50_Q4ZXA9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZXA9_PSEU2 Length = 748 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 117/703 (16%), Positives = 224/703 (31%), Gaps = 73/703 (10%) Query: 95 FVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL--K 152 A ++ G + WL +V+ G + Sbjct: 30 ASCTAALLMVSSATGWEQLVSCGQSLLKADEAWLRMVSSYGDVVLVGQDSPANAIQTNSP 89 Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR--MIVSPHFAQILWR-----RDIA 205 +T A F L ++ + M+ R + + + Sbjct: 90 GTTLIYVAIRGFRHELLGAMLLSNSDGAMVLSAAQRYALQAQAVHIRTYLQPGRDPEANN 149 Query: 206 PSLGKEKRAFTL---SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL---- 258 P + +R L A ++L+ Y P F I ++ Sbjct: 150 PLVTSFERLRLLESVVINANDAILITEAEPIDLPGPRIVYCNPAFLAITGFTEEEVIGRT 209 Query: 259 ----------RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 R + A+S + + +++ + + + + Sbjct: 210 PRILQCEDTSRATLDIIREALSHWRPVEVELLNTRKDGSQFWVELSIVPVANEKGWFTHW 269 Query: 306 LYMVRIYHRSEWLN---------------------------RRWHLQALTDPLTLLPNF- 337 + + R + A D LT L N Sbjct: 270 VSVQRDITERKESQQLAQRARLEWEEKLALQSRLEERERMSEELTYIAFHDELTSLFNRA 329 Query: 338 -------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 A E + + L +D + ++ G + ++ + L ++ N Sbjct: 330 YLMNELTTAFETRKSRYERATVLFLDLDGFKVVNDSMGHLAGDQLLKGVANRLQTCVRSN 389 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGN 447 + L ++ G E ++L G + M + S+ I + + + Sbjct: 390 DVLARIGGDEFAILLMGKDQPETAVKMAERIVSQLNTAIQIEGQDIFISCSIGIVSAGES 449 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL + + +++ N +R AL+ D L++ Sbjct: 450 HTKPEELLRDADVAMYSAKKQGRGR-WSIFNTSMREAAIDTLMIQNALRQALEDKDFLVF 508 Query: 508 AQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + G + ++ GI++PD F+P+ + V+ + Sbjct: 509 YQPIYSGNCEHLVGVEALVRWNHATMGIISPDAFIPIAEDLGIIHELGAWVMHKACSEVQ 568 Query: 565 THPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + R +VN+ L R+ R+ + + +E+TE ++ Sbjct: 569 AWRKEFSHLDLRLNVNVSGKELSHPGFVDRVTRIIASTGLPATQLQIEVTESVFLYQPDA 628 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + Q+ + G R+A+DDFGTGY++ + R D +KID FV ++T IV S Sbjct: 629 IAEILRQIRQLGVRVALDDFGTGYSSLGYIDRYPIDAVKIDRSFVSRMMTYERSEAIVSS 688 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I L +A +L + AE VET +Q LL K+G Y QGYL+ RP Sbjct: 689 ILSLGRALNLDITAEGVETAEQYNLLRKMGCPYFQGYLLNRPM 731 >UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MED7_DIAST Length = 894 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 113/621 (18%), Positives = 216/621 (34%), Gaps = 31/621 (4%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 + + + DA + ++ L++ ++ Sbjct: 257 AMVVARPLIYPDLWATVSLPRDAALAGWRQEAQTVLFGALLFAATVVAAGSVVALYLRRM 316 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 RR +A S +A + + + F + V I + + Sbjct: 317 HSARRVVARSKATLDQALEAMVSGFVLLDAQRCVVQWNLRFEEMFPWLVSTIGEGVPFRR 376 Query: 258 LR------YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL----AFILAVLISFSVCLLY 307 + + Q E L + + ++ Sbjct: 377 VLETTVHYHLPGASAEEKRAWVEERLQQQCTPRGGVEQLLPNGHYVQITERATADGGVVI 436 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + A D LT LPN R L + + +D+ Sbjct: 437 IYHDVTDLRLATAEVEHLAFYDQLTGLPNRRLLLDQLGDASASAVRTGTHGAVLFIDLDH 496 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GRL 414 + ++ G + + ++ + R L ++ + + +L G E +++L+G TE ++ Sbjct: 497 FKTLNDTLGHEIGDYLLQQVARRLESGVRVGDIVARLGGDEFVVLLAGLATEAERAREQV 556 Query: 415 QHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + L ++ F +T +L Q Q A Sbjct: 557 RAVAEKVVQLLAQPYPIAGQSYHGSCSVGAALFGSVLQTAAEVLKQADIAMYQVKAQ-RG 615 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYD 529 A+ + + + + L + ++ AL +G LL+ QP + G + +L + Sbjct: 616 NAVCFFDPRMQVALSARARLESDLQDALREGQFLLHLQPQFTRDGAVVGVEALLRWQHPE 675 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQK 587 G++ P +F+ + L VL S + LA + SVN+ Sbjct: 676 RGLVLPAEFIGVAEDSELIVPLGRWVLASACELLARWQASPRLRELSLSVNVSARQFRSP 735 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ +L R + LE+TE + E S+ + QL G R A+DDFGTGY+ Sbjct: 736 DFVEQLSQLLLRSGAPAHRLELELTESLVLEDVEDSIAKMHQLRTKGVRFAVDDFGTGYS 795 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L RL +KID FV + + D ++V++I +A+ L VVAE VET++Q++ Sbjct: 796 SLAYLTRLPLHRLKIDRTFVHHLGESRSDDVVVQTILGMARNLDLEVVAEGVETEEQRSF 855 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G QGYL+ P P+ Sbjct: 856 LALHGCDVYQGYLLAHPMPVE 876 >UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Piscirickettsiaceae RepID=Q31EA2_THICR Length = 1289 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 114/553 (20%), Positives = 202/553 (36%), Gaps = 27/553 (4%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIF--TLG 254 D + + A ++ A +++ +L I GY + L Sbjct: 719 SDKRQAEERLNLAASVFTHAREGIMITDKHARILDVNKGFTQITGYEREEVLGLNPNILN 778 Query: 255 VGKLRYPFLNLTWAVS-TLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVR 310 G F NL W + T Y + + + L + Sbjct: 779 SGCQSKEFYNLMWKTLFEEGHWSGEIWNRNKNGTVYPQMITITAIKNSDGMTQNYLALFT 838 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + R+ A D LT LPN L + + + +D + Sbjct: 839 DITSLKEQQRQLEHIAHYDALTQLPNRSLLADRLQQAIFASQRHNSLLAVLFIDLDGFKK 898 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ +G + + + + +++E + L ++ G E ++VL + + ++ L Sbjct: 899 VNDLHGHDAGDELLVELSKRMKNILREEDTLARIGGDEFIVVLVNLDAPSDCEMILRRLL 958 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S + + + + + L+ Q+ + Sbjct: 959 ESTSESVDIEGEVVSVSASIGVTFYPKDNVDADLLMRHADQAMYQAKQSGKNR-YHYFDV 1017 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 + Q + N I+ AL++G+ LY QP N G + ++ G++ P Sbjct: 1018 QMDSMLQSQSAIQNEIQDALNKGEFELYYQPKVNLAQNIVIGVEALIRWNHPKKGLLVPI 1077 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 +FLP I S D V+E+ LK ++ SVN+ L QKN + RL Sbjct: 1078 EFLPFIENHPFSVELDQWVMETALKQMSEWRAQSLEMSISVNVSAYFLQQKNFIQILERL 1137 Query: 597 FKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 +Y + ++ +E+ E A N + + G A+DDFGTGY++ L+ L Sbjct: 1138 LSQYSDLPKFSLEIEVLETTALENISNISDLVHICRDMGVNFALDDFGTGYSSLMYLRHL 1197 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 A IKID FV+D++ + D I+ I LA + V+AE VET L +G + Sbjct: 1198 PARTIKIDKSFVRDMLVDMDDRAIIDGILKLASVFNREVIAEGVETVAHFEALLDMGCEQ 1257 Query: 716 LQGYLIGRPQPLA 728 +QGY I RP P Sbjct: 1258 VQGYGIARPMPAD 1270 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 15/173 (8%), Positives = 43/173 (24%), Gaps = 20/173 (11%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 L L AV +L +L I Q ++ + ++ +A + ++ Sbjct: 174 LILVLAVFTQAILILFLFYDISRRKQLQAELKQVATTLTNIMDSSTEVAVIATDTEGVIT 233 Query: 230 --------LCTPYENDFIAGYLVPVFFIIFTLGVG--KLRYPFLNLTWAVSTLCL----- 274 L + + F + +L Sbjct: 234 EFNSGAEKLLGYSAQELVGKETPLKFHSEKEIQARAQRLSEALKRPVKGFQVFTEKLKED 293 Query: 275 --LNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRW 322 ++ + + ++ I+ ++ + V L + + + Sbjct: 294 SPQDHEWTYARKDGVLVPVSLIVTPILDENHQKVGYLGVAQDVTELRRSQQAL 346 Score = 43.4 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 12/141 (8%), Positives = 31/141 (21%), Gaps = 14/141 (9%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLG 254 +R + E+R T+ + + + L ++ + G Sbjct: 592 RKRSEDLLVENEERLRTIFEILPIGITLTDREGQIVECNSASEVLLGIPREEHLARKYDA 651 Query: 255 VGKLRYPFL---------NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 Y +++ + + L L + + Sbjct: 652 KEWTIYRADGTAMPSEEYAAVRSLTNQETIKNQVMKVCHSGDCTWLNVSATPLNHPNYGV 711 Query: 306 LYMVRIYHRSEWLNRRWHLQA 326 + R +L A Sbjct: 712 VVTYIDISDKRQAEERLNLAA 732 Score = 43.4 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 13/151 (8%), Positives = 33/151 (21%), Gaps = 10/151 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + F +L R + + + W + ++L Sbjct: 451 VVSFLFLARDVTARVQQSKELVEKDERLELILSASKIGQWDWDIESNVMLWDERSCTML- 509 Query: 240 AGYLVPVFFIIFTLGVGKLR----YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA--- 292 GY F + + L Y L + + G + + Sbjct: 510 -GYPPEAFKMDYDKWASLLHPDDAYVMKRLKAHLEKGEAYSVEYRIRSGDDDWVWVESQG 568 Query: 293 -FILAVLISFSVCLLYMVRIYHRSEWLNRRW 322 I + + ++ + + Sbjct: 569 QTIESDAKGRPIRMVGIYMDITDRKRSEDLL 599 >UniRef50_B2J1V8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B2J1V8_NOSP7 Length = 720 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 97/580 (16%), Positives = 200/580 (34%), Gaps = 45/580 (7%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + ++ + + + + D + + Sbjct: 124 AQVRAERKQAQKLLQTLASNIPGMIYSFVQYSDGSIAFDYISFGCLDLLELTPDQILENA 183 Query: 251 FTLGVGKLRYPF----LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVC 304 + + TL +Y + + + + Sbjct: 184 SLCFAQIHPDDYPGCYAAANESAQTLKPFSYEWRLVTPSGKLKWVQASARPECRENGDIV 243 Query: 305 LLYMVRIY--------------HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----- 345 ++ + +L DPLT LPN L + E Sbjct: 244 WYGVLLDVNERQVALREQQAALRERKQAQELIIHNSLHDPLTDLPNRTLLIERLELAINR 303 Query: 346 ----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + L +D + ++ G + +++I L ++E + + ++ G E Sbjct: 304 AKRLETYRYAVLFLDLDRFKVINDSLGHLAGDQLLKNIAHKLKTHLREVDLVARIGGDEF 363 Query: 402 LLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +++L + + + + N+ + + LL Sbjct: 364 VILLEDISDIEKAIQITERMLIDFQTPLMLNDAEVVISTSIGIVLGTNEYSQASDLLRDA 423 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN----- 513 ++ A + + + Q ++ + IR A+++ + ++Y QPI + Sbjct: 424 DIAMYKAKAQRRN-SYKIFDVKMHTQAVNRLTIETDIRKAIEREEFVIYYQPIVDILGDG 482 Query: 514 ----KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-- 567 G++ +L G++ P +F+ + + L + D +L + LA Sbjct: 483 QSKAGRLIGFEALLRWQHPTRGLVLPKEFVSIAEETGLIVQIDRWMLYKACQHLADWKVK 542 Query: 568 -CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 + ++NL + Q N+ I ++ + + + LEITE N ++ Sbjct: 543 FATHFPIKVNINLSVQDIRQGNLIEYIDQILAQIGLEGDCITLEITESMLIENISQTIDL 602 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + QL +I+IDDFGTGY++ L RL AD +KID FV + + +V +I L Sbjct: 603 LSQLKSRKIKISIDDFGTGYSSLNYLHRLPADNLKIDRSFVSQMQQGNRNYQVVSTIIAL 662 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + L+VVAE +ET QQ L +LG ++ QGYL +P Sbjct: 663 SNQLGLAVVAEGIETPQQLQWLQELGCEFGQGYLFSKPLS 702 >UniRef50_A6X5M4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rhizobiales RepID=A6X5M4_OCHA4 Length = 786 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 112/737 (15%), Positives = 247/737 (33%), Gaps = 39/737 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 L + ++ F + ++ + S+ I + L V F Sbjct: 50 LAISALAGGLGVWATHFVAMLAYRGTVAIEFDFTITVLSAAIAVLGFWLSVRFLNGKAFK 109 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 + + + + + +S ++ A + +L I L + + + + Sbjct: 110 YVLIAAISATLSIAAMHFTGMSAIRAAADVHYDLPPILIGSIISILLLLAAFWF-VMNTA 168 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 W R+ L V I C+++ + T + L+ AV+ Sbjct: 169 GWMRVL-LPTVGGILAVCTLHFTAVASTELVPNPTLPAADPLGIGRLWLIGAIAAVVSIV 227 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 L + + R + G + ++ + + + Sbjct: 228 ALTTII----------AVFVDRYMTDLKGFANATLDGLAVVRDGGIVEMNARFSDLMRRS 277 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + L + A+ E + LA Sbjct: 278 EKALVGVAPDTLLLAADGLPVCASRPEAIEAAPRFPN-------DERIFELAVHTIEYQG 330 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQEAGKSFCC 354 +L + R R+ A D LT LPN E+ + Sbjct: 331 RPCEVLAV-RDLTEKRTAQRQIEHMARHDTLTDLPNRMFFEERLANAVARRSREPFAVLA 389 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ +G ++++ L + + ++ G E +++ G Sbjct: 390 LDLDRFKAVNDIFGHAEGDRVLKTVSSILKRSINGIDTAARIGGDEFIILQVGVPQPKGA 449 Query: 415 QHMVNILNSRQIHWNNTGL----DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + +G + + + + + ++ Sbjct: 450 RKLSEKILDT-FRSELNTVLDPTAVGVSIGVAVYPNDGKDAEAIRHAADIALYRAKTEGR 508 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + + + ++ + +R A+ +G + + QP+ + GY+ ++ Sbjct: 509 GM-VAFYSPEMDREIRERRQMEADLRHAMVRGQISIAYQPLFATADGSCTGYEALVRWNH 567 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 + G + P+ F+P+ + + VL + A +VNL P+ Sbjct: 568 PERGQIPPEVFVPIAEETGVIVPLGEWVLREACRTAAGWEK---HLTIAVNLSPVQFRLI 624 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ + + + + P + LE+TE + +++ + ++ K G RI +DDFGTGY+ Sbjct: 625 NLPDTVSSVLAQTGLDPTRLELEVTEAALMKDRLTTLELLRRMKKLGVRIVMDDFGTGYS 684 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+ D IKID F+ + T+ IVR+I L ++ L VVAE +ET Q + Sbjct: 685 SLSNLQSFPFDKIKIDRSFITSMETDVSARAIVRAIVGLGRSLDLPVVAEGIETFDQHRM 744 Query: 708 LHKLGVQYLQGYLIGRP 724 + + G + +QG+L GRP Sbjct: 745 VIEEGCEQVQGFLFGRP 761 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 114/586 (19%), Positives = 212/586 (36%), Gaps = 43/586 (7%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA---LSVLLLLL 230 I L L++ + + L + Sbjct: 235 LGQTISAPLLKKALGTGKGEELVPTLYQEADSLLATRRLHEGLLLIGILPKEELLEESQR 294 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + G +V + F + + P L AV + N Sbjct: 295 LGNSVGWIVLGTIVLLIFALLISMNVLMVRPLKQLMGAVREIGRGNLAPT---------- 344 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----- 345 +A + + L + E R A D LT LPN + Sbjct: 345 IALSTSDELGKLG--LSFQEMAGNLEKSRVRVERLAYHDSLTGLPNRFRAHETLRCMISL 402 Query: 346 ---QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK---------- 392 + + L +DN + ++ G + + + L +++ + Sbjct: 403 AHRESRRMAVLFLDLDNFKRVNDTLGHQVGDQLLMEMAIRLQVVLRAEDVIHQEVSQNTL 462 Query: 393 --LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 L +L G E +++LS + + + + ++N + G F + Sbjct: 463 DVLARLGGDEFVVLLSNVSSSRDAAKVASRILDIMKLPFYFNENEIYSGCSIGISLFPSD 522 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L+ + Q+ + + + + L +R AL +L+LY Sbjct: 523 GSDVDDLIKRADAAMYQAKSQGRN-NFQFYSASYNLAALEHISLEGRLRRALKNNELVLY 581 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + G + +L GI+ PD+F+P+ + L VL + L+ Sbjct: 582 YQPLVQARTGKIVGLEALLRWNDPLDGIIPPDRFIPVAEESGLILPLGEWVLREAGRQLS 641 Query: 565 THPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 T SVN+ + L ++++ + ++ K + P + LEITE Sbjct: 642 TWHAAGFTDACVSVNVSAIQLQRQDLVTIVDQVLKDNGLRPWQLELEITETALMRIRPEV 701 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++ + + G I++DDFGTGY++ L+ L +KID FV+D++ + DA IV ++ Sbjct: 702 IGDLNAMRRKGVTISLDDFGTGYSSLSLLQELPIGKLKIDKSFVRDMLVDPKDAAIVSAV 761 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AK+ L AE VET +Q A L + G LQGYL+ RP P+A+ Sbjct: 762 LFIAKSLGLQSTAEGVETPEQAARLAEEGCDQLQGYLLCRPLPVAE 807 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 111/553 (20%), Positives = 199/553 (35%), Gaps = 26/553 (4%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 R +L E+ T+ + + Sbjct: 447 RLRQLALAVEQSPNTIVITDTDGRIEYVNEAFVRTTGYTAAEAIGQNPRLLNAGKTSAAT 506 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWL 318 + +L + + + Y+ +A + + + Sbjct: 507 YADLWATLGRGEVWRGEFINTRKDGGTYTELATIAPIKQADGSVSHYVAIKEDITGRREA 566 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQE-----AGKS---FCCLRIDNLEFMSRHYGLM 370 R A D LT LPN + + L ID+ + ++ G Sbjct: 567 EARIRQLAYYDTLTGLPNRSLMWDRLRHAIAASARSGASGMLMLLDIDHFKLLNDTQGHE 626 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNILNS-- 423 + +R + + L ++E + + ++ + +V+ + + + L+ Sbjct: 627 VGDALLREVAQRLRGALREEDTVARVGDDDFAIVVENLGADRDEAIGRAEKIAEHLHRCV 686 Query: 424 -RQIHWN--NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + +G F G +L Q ++ L + E Sbjct: 687 TAPCELGLASGPYHVGASLGLTLFRGRNAAADAVLKQAEVAVARAKDDGRNL-IRFFSEA 745 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKF 538 + + L +R AL LY QP + G + ++ +G +++P F Sbjct: 746 MQAVVAARAELELKLRAALACNGFRLYYQPQLDRNGRVIGAEALIRCFDAEGEMISPAAF 805 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 +PL + L VLE+ L G S+N+ Q + G++ Sbjct: 806 IPLAEETGLIVPIGEWVLETACAQLRAWQRTPSTAGLSLSINVSARQFHQPDFVGKVAAA 865 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +R+ I P + +E+TE + E+++ + Q+ G R A+DDFGTGY++ LKRL Sbjct: 866 IERHRIRPGGLEIELTESVVIGDIETTVLRMRQIKALGVRFALDDFGTGYSSLSYLKRLP 925 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID +FV+D+ +T IVR+I L+++ L VVAE VET Q LL G + Sbjct: 926 FDQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLDLKVVAEGVETAAQHELLLTRGCELF 985 Query: 717 QGYLIGRPQPLAD 729 QGYL GRP P+ D Sbjct: 986 QGYLFGRPVPIED 998 >UniRef50_Q2NCL2 Sensory box/GGDEF family protein n=2 Tax=Erythrobacter RepID=Q2NCL2_ERYLH Length = 783 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 111/705 (15%), Positives = 234/705 (33%), Gaps = 38/705 (5%) Query: 53 LSILFIFGWRGVVPVLCGMFCTNLWNFH----LSFLQTAVMLGSQTFVVLCACAILRWQL 108 L+ L + GW + + +F + W + Q + ++ + L Sbjct: 68 LAWLTVLGWAIGLALTLSIFTSQDWLLRKADGRTLSQREAFRHASGSALVAIAWAAQPVL 127 Query: 109 GTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY----LVGSFFDFPLKISTFFGDADAIF 164 W YG + + L + + + + ++ I F Sbjct: 128 H--WLYGTPTSMLQAWLIVMVVTLGSSLALAAAPLGAIIYIATTSMTAIVVFGLAGQYPP 185 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA-- 222 V LL + + R + E+ W Sbjct: 186 AVAALLYMLVILWGVYQRAEAFLRQSAAEAGMNERNEVVSLLLREFEENEADWLWQIDTQ 245 Query: 223 ----LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 E G G+ +L + + Sbjct: 246 RKVRSVSPRFAFALGLEPGEADGMPFLQLIAGDAWKTGQFPTSLHDLAERLKRKESFSNL 305 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + ++ + + + + A D LT LP Sbjct: 306 LVKVSIDGVTRWWELSGTPMLDEEGKYVGYRGVGSDVTEQRESSEKIAYLARYDTLTELP 365 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + ++ + + +F + +D + ++ G + + L ++ Sbjct: 366 NRLMVNESLGEAMKYAKQWRSRCAFMMIDLDRFKAVNDSLGHQTGDELLAEVSGRLKSIL 425 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 ENE +L G E +V+ + + + + S+ N+ L +G Sbjct: 426 SENEMCGRLGGDEFAIVIRDVKDRDYVDTVARRVIEHLSQPYEVNHHMLYVGASVGSAIA 485 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + +++ L+ ++ E + ++ L ++R ALD+ + Sbjct: 486 PRDGRSVEELMRNADLALYRAKDLGGGEHFQ-YEPSLHKSAEERRQLEFSLRMALDRQEF 544 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP+ + ++ +L + G ++P KF+PL L VLE Sbjct: 545 ELAYQPVVDANDETIISFEALLRWNSAEHGFVSPAKFIPLAEDTRLIVPIGSWVLEQACI 604 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 A P + +VN+ P L++ + ++R + + LE+TE +A Sbjct: 605 EAANWPD---PVKVNVNVSPEQLVEPDFVATVVRALSTSGLPANRLELEVTESIFVRDAL 661 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT-NTLDAMIV 680 + ++++ G ++A+DDFGTGY++ L++L IK+D +FV+ + I+ Sbjct: 662 VAGKALKEVMHLGCQVALDDFGTGYSSLGYLRQLSFSTIKVDRMFVQGAAQGSKESLAII 721 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 R++ +A + ++ AE VE+ ++ L+ +LG +QGY GRP Sbjct: 722 RAVVAMADSLDMTTTAEGVESFEEAELIRELGCTKIQGYYFGRPM 766 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 84/432 (19%), Positives = 167/432 (38%), Gaps = 18/432 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + N A D LT LPN A + +D + Sbjct: 168 ITQRKQAN--LFYLAHFDQLTKLPNRVLFMDRLAMTLAEASRTNAQVGLLFIDLDKFKHF 225 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + ++ L +E + + +L G E +++ + L + + Sbjct: 226 NDSMGHAFGDQLLIALAGILARCSREMDTVARLSGDEFTIIVDSISGQKDLDILCWRILD 285 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + E L+ + ++ + Sbjct: 286 ALKLPQQIMGREIFISASIGTAIYPLDDEDANNLMIKADAAMYEAKRNGRN-TYRHYAAG 344 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + + ++ L +R A+++ + LY QP + + G + ++ G++TP Sbjct: 345 MQLYSLDRMSLETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWHHPQRGLLTPIH 404 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 F+ + + L V+ + + R SVN+ + Q + + + Sbjct: 405 FIEIAEETGLIVAIGQWVISEACRQHQAWLQEGFQPMRISVNISAMQFYQSDFCDMVEHI 464 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 K I+P + E+TE +A++ + + QL + G ++AIDDFGTGY+N L++ Sbjct: 465 LKETRINPAYLEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTGYSNLSYLRKFP 524 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +K+D F+K I ++ IV++I LA++ SL +VAE VET + G ++ Sbjct: 525 IDRLKVDQSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVELHWAESSGCTFV 584 Query: 717 QGYLIGRPQPLA 728 QGY +P P Sbjct: 585 QGYRFSQPLPAE 596 >UniRef50_C4XMU6 GGDEF domain protein n=2 Tax=Desulfovibrio RepID=C4XMU6_DESMR Length = 601 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 99/568 (17%), Positives = 192/568 (33%), Gaps = 28/568 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 R ++ + A L + R + + + D A Sbjct: 25 PFAKTSLRAMLPDIQNLLESLPSHAALLDGDGRIRFANASCLELL--------RDLDPSA 76 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVLI 299 P L + AV L Y + G ++ A L Sbjct: 77 AVGSPFADSCVKLLPETVSAAVREGLAAVLDGRLPRYEMDLPCGPSGSQIWRALCFTPLR 136 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------K 350 + + + R + L A D LT L N +Q Sbjct: 137 GPTSGAVATLTDISRQKQLEEHILHDAFHDTLTGLFNRALFINRLDQAIKRLRRNPDALY 196 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + +++ +G + + I L ++E + L + G E +++ Sbjct: 197 AVLYLDMDRFKLVNKTFGHVTGDRLLMVIANRLQKQLRELDTLARFGGDEFAILIEDISG 256 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 M + ++ + + E +L S Sbjct: 257 LDEASTMAENVLRQLAQPFRLKKQEIFVTCSLGVVVGSAAYEHPDQVLRDADNAMYSSKE 316 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 H + + T +++ + +R A++ G++ ++ QPI + + G + + Sbjct: 317 HGGDH-YTVFDAGMRVLTQRRMEMELALRQAMESGEITVHYQPIVSLATGDVTGLEALAR 375 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMP 581 G + P +F+P+ + L +L + L + SVN+ Sbjct: 376 WQHPRQGFIPPSEFIPIAEESGLINELGALILRQSCRRLVELGRENPEGEKLSVSVNISG 435 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + + + I V LE+TE +A+ ++ I+ L G ++ IDD Sbjct: 436 RQFKRPDFVQEVAGILAETGIDASRVKLELTESVLMDDADEAVRAIKNLKALGVKVVIDD 495 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ ++R D +K+D FV ++ + IVR+I +A L VVAE VE Sbjct: 496 FGTGYSSLSYIQRFPFDSLKVDRSFVGNMNEAEQNMEIVRAIIAMAHKLGLEVVAEGVEL 555 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +A L +L + QG+ R P + Sbjct: 556 AEHKAALSELRCESAQGFFFSRAVPGEE 583 >UniRef50_A2SCH7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Methylibium petroleiphilum PM1 RepID=A2SCH7_METPP Length = 806 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 113/664 (17%), Positives = 228/664 (34%), Gaps = 24/664 (3%) Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVG 144 Q ++ S ++ C A + L Y LT Q + L + IG + Sbjct: 133 QLRLLADSVPALIACYDAREQRCLFANRPYALTFGRDEQSILGLPIAEVIGEAALRRIRP 192 Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 ++ + + + +L L V R Sbjct: 193 QLDTVLVEQRAVAYERQLVRADGRTQWVEVHLLPQLATDGRLIAFFVLI-SDISRHRLAE 251 Query: 205 APSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 E+R +A ++ + + GY + Sbjct: 252 QAVRESEERLGKFMQASAEGIVFHKGGVITDANAPIGMLVGYGLDELM-GRRTLDFVAPD 310 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA-VLISFSVCLLYMVRIYHRSEWLN 319 + +S+ Y + + FI+ ++ + +VR Sbjct: 311 QVSKVAAVMSSGQETTYESALIDKSGRRIPVEFIVRTMMRGDERLRMTIVRDLRDRHAAQ 370 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMM 371 H A D LT LPN A +Q + + +D+ + ++ G + Sbjct: 371 AHIHHLAHHDALTGLPNRLAFMAEIDQLMARAAASREALALLFIDLDHFKRVNDSLGHLA 430 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 ++++ + + +++ ++ + + G E ++++ G + + L + + Sbjct: 431 GDELLKTVAQRIGAVLRASDVVARFGGDEFMVLIGGGPRLEDVADVARKLLAAIEVPLDA 490 Query: 429 N-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + F G+ T L+ ++ A + ++ Sbjct: 491 EVGRSISVTPSIGIAMFPGDGITPAELIKHADTAMYRAKARGRA-TYQFFDPTLASNAYA 549 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++L + AL++G+ +L+ QP + G + ++ + G++ PD+F+PL Q Sbjct: 550 ALVLEGELAQALERGEFVLHFQPQVRAGDGVLVGAEALIRWQHPERGLLLPDQFIPLAEQ 609 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL + D +VNL + + + + + Sbjct: 610 QRLMLPIGTWVLHEAARAARRWHDDGLCAVPVAVNLSAVQFQAPDFVSTVAQALAGAGLP 669 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + + LE+TE + QL G R+++DDFGTGY++ LK L D +KID Sbjct: 670 GRLLELELTERMLMDELPEVSGRLAQLKALGIRLSVDDFGTGYSSLGHLKSLPIDKMKID 729 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV D+ I R+I +A++ ++V+AE VET+ Q+A L + LQG I Sbjct: 730 RSFVVDLPEARGSVAIARAIIQMARSLGITVIAEGVETEAQRAFLAREQCDELQGEAISP 789 Query: 724 PQPL 727 L Sbjct: 790 SLSL 793 >UniRef50_Q21VJ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VJ9_RHOFD Length = 735 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 103/576 (17%), Positives = 198/576 (34%), Gaps = 47/576 (8%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 Q R E++ L + ++ L F+ + + Sbjct: 153 RRLQAENRHIAWQLESSERKYRYLVDSSPD--IIYTLDHEGRFTFVNDRVQQLLGFSREE 210 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-------- 305 +G+ + + + N + L Sbjct: 211 LIGEHYSVLIQEDDVLRANYVFN-EGRGDYRLSRNVELRLKSRHAKGEVRTFTHELMTIS 269 Query: 306 --------------------LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 + R + + QA D LT LPN + Sbjct: 270 FNASDTSQEPDSTQQELFGTYGVARDITDRKRADELITYQAYHDILTDLPNRVLFKDRLG 329 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 +A + + +D + ++ G ++ ++ L ++ + L +L Sbjct: 330 LAVLQAKRNDASLALMFIDLDRFKLVNDTLGHVIGDKLLQQAAIRLKACLRSGDTLARLG 389 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E VL + + + + + G+ E+ L Sbjct: 390 GDEFTAVLPELSDRQDAVLIAEKFLECLRQPFQLAGQSVHISASIGIAIYPGDGESTDEL 449 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 + A + + + +++ L +++R AL++G+L +Y QP + Sbjct: 450 IRNSDIAMYHMKAEGKN-GHSFFDRSMLDASCQKIELEHSLRLALERGELEMYYQPQVDV 508 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK- 570 G + ++ + G + FLP + L +LE++ L Sbjct: 509 RTQKIVGAEALMRWNHPERGFLGAGDFLPFAEENGLIIPITDWMLEAICLDLLDWNAAGG 568 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + R S+NL P L + + ++ +HI+ + +E+TE N ++++ + +L Sbjct: 569 EPVRLSLNLSPQYLDRGDFFDKLKNALTLHHINASQIEVEVTENICIHNPQTAIEQLNKL 628 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G +AIDDFGTGY++ L R IKID FV I + +V +I +AK Sbjct: 629 CQLGVSVAIDDFGTGYSSLSYLHRFPIHTIKIDRSFVMKIQNDNSQCPVVLAIISIAKGL 688 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 SL++VAE VETQ Q+ L + G +QGYL +P Sbjct: 689 SLNLVAEGVETQVQERYLERSGCNTMQGYLYHKPLS 724 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 118/647 (18%), Positives = 218/647 (33%), Gaps = 34/647 (5%) Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 L L L + + P+ ++ G + F +++ + Sbjct: 37 ALRGEVWDVALLSCSLAELPAAEAIVLFREHAPRMPVILTIERGAQEFPFELLENGACDF 96 Query: 175 AVLIY-NMLFYYLTRMIVSPHFAQILWR-----RDIAPSLGKEKRAFTLSWLAALSVLLL 228 L + R + ++ + I R F L+ L Sbjct: 97 VFKSNPARLLAVIERECANVKLSREEQQVLVSPERIEQIDQGVARFFQLASNTPECYWLT 156 Query: 229 LLCTPYENDFIAGY-------LVPVFFIIFTLGVGKLRYPFLNLTWAVS--TLCLLNYNQ 279 T AGY + ++ + AV L L+ Sbjct: 157 DAATQRVTYVSAGYEKILGRHVEALYADSHDWLNYVHPEDQDRVLAAVRTYRLGGLDAKF 216 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + + L + ++ + + A D LT LPN Sbjct: 217 RVRRPGDVQCWLHARNFPVRDEEGNIVSVGGVATDITSLLADQWKSPYFAHFDALTALPN 276 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 ++ S + ID +++ G +R + L ++ Sbjct: 277 QLMFYDQVKRMIALSKRKDLPLSLMVVDIDRFRQLNQTLGHASGDELLRQVAGRLSGSLR 336 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFD 445 E++ L +L ++L + + + + + G + Sbjct: 337 ESDILGRLGTDVFGILLPDVADTHQASIVARRIIDTMIMPVRVAGQDVFATAGVGIVFYP 396 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ + + + ++ L +R A + + + Sbjct: 397 QDGNDVHELVTNAGIAGRHAKNLGRN-SYQYYFPGMHEGARDRMFLEIDLRHATLRNEFV 455 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + G + +L + GI++PD+F+PL+ + L + VLE + Sbjct: 456 LYYQPKASCADGRITGVEALLRWQHPERGIVSPDQFIPLLEETGLIVQVGRWVLEEACRQ 515 Query: 563 LATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 SVNL L + + + ++ ++ + LEITE NA+ Sbjct: 516 AVEWQAAGLNIPSVSVNLSARQLQAETLLTDVAATLEKTGLNAACLDLEITESMLMDNAD 575 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 ++ + L K G I++DDFGTGY++ LKR D IK+D FV+DI ++ DA I R Sbjct: 576 MAIQTLSALKKMGVTISLDDFGTGYSSLAYLKRFPLDAIKVDRSFVQDIAADSDDASITR 635 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +A L VVAE VET +Q ALL +QGY RP P + Sbjct: 636 AVITMAHHLKLKVVAEGVETPEQLALLISHQCDVIQGYFFSRPMPAS 682 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 106/598 (17%), Positives = 213/598 (35%), Gaps = 29/598 (4%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 +V + TA + + + + + + LS Sbjct: 19 VFQFALLVFIAFSGTAAQYGLQSRWDVVLSLGLGAALMLPCQWLNHRGHHEAAAGMVLSV 78 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 ++ + + GY V + L + V L L N Sbjct: 79 ATLSLFSIMWFSDGLRDSSLLGYPVILIGAGQLLKPRHFWMLLTFMLGCVVMLGLGTLNG 138 Query: 280 NF--LQGVETEYSLAFILAVLI-----------SFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + L +++L+ L+ + R + A Sbjct: 139 WRTGITSGTELDRLTDSVSILLINGFLIWFLTYDMQNALVRLRAQIARFHASEKNLTYLA 198 Query: 327 LTDPLTLLPNFRA----LEQAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN L +A ++ + + +DN + ++ G + Sbjct: 199 QHDGLTRLPNRILGNELLTEAMRVAAEEKNLVAMLFVDLDNFKDVNDSLGHSAGDDFLVQ 258 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDM 435 + + L +++++ + + G E L+ L+G + + + + + + Sbjct: 259 VAQRLRESVRQSDIVCRQGGDEFLIGLTGLQHPDAVAKVSQDILQKMQAPFQLRGIEVLA 318 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + + L+ + E + T+ + L++++ Sbjct: 319 SCSIGIALYPQHGNSFDELMRHADLAMYHAKEAGRN-TFRFFSEDIRSSVTESLHLISSL 377 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ Q + +L+ QP+ + G + ++ G+++P F+ L + L Sbjct: 378 RQAVTQEEFVLHYQPVYDLHSGRLLGAEALVRWQNPKLGMVSPGLFITLAEKSGLIVDIG 437 Query: 553 LQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + + SVNL P+ + N+ I + + + P+ + LE+ Sbjct: 438 QWVLTEACRQMQAWRQQGATDLFVSVNLSPVQFSRGNVEAVIAQALRETGLDPRQLELEV 497 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + E + + ++ G R++IDDFGTGY+N L+R +KID FV+ ++ Sbjct: 498 TESTLIHDTEKFITTLGRIQHSGIRMSIDDFGTGYSNLSYLQRFPVHKLKIDQSFVRRLM 557 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D +V +I LAK+ L+V AE VE + + L ++G QGYL RP P D Sbjct: 558 QGQKDVAMVSAIIHLAKSLQLTVTAEGVENEATREALTRMGCDQAQGYLFARPMPAKD 615 >UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M8T6_METRJ Length = 776 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 111/739 (15%), Positives = 221/739 (29%), Gaps = 44/739 (5%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVML-----SILFIFGWRGVVPVLCGMFCTNLWNFHL 81 + P A + + +I G++ + + Sbjct: 26 VDGLYQPFASLAVGAASGTIVATAAAFWSDDWAITLTAFAVGLIGLTRVLLARVYLTKGP 85 Query: 82 SFLQTA------VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 +G+ + + + + G+ Sbjct: 86 EKYDRHEIWETYFSVGAFAYAASLGILSFLITTRSSNLALQVITPTFTIGYAAGISGRNA 145 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + + + D + +LSL A + +IVS Sbjct: 146 GRPLLAIAQVVLSAMPLSAGLLVSGDGERASLGILSLLFA-YGMIDITLSTREIIVSALV 204 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---YENDFIAGYLVPVFFIIFT 252 A + + + + + + F++ +P I T Sbjct: 205 TTREKEALAAKFQAQANLFDIALRNMSHGLCMFDARGRLQVWNDQFLSISGIPSSRI-HT 263 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--------- 303 + Y + + F S +L + V Sbjct: 264 NSTARSLYKLSRAIVDERSAGRGSTLSTFAAASNALRSGNLVLILPDDRVVSLMQRRTAE 323 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAP----EQEAGKSFCC 354 + + R A D LT L N + + +A + + Sbjct: 324 KGYVIIFEDITERRRNEARIQQMASYDDLTGLLNRSSFKAKVSEALKASARSKGDFAVHL 383 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D+ + ++ G ++ + L + + + +L G E ++V + Sbjct: 384 LDLDHFKVINDTLGHPAGDRLLQMVADRLRGIGALSGSVARLGGDEFVIVQQSVTSPAVA 443 Query: 415 QHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + T + +G + LL Sbjct: 444 EDLARRVLQELERPFDIDGTHVTVGASIGIAIAPFHANDEDRLLKCADIALYAIKGAGR- 502 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + + T + L + +R AL G+L L+ QPI + + +L Sbjct: 503 SGFKIFQHEMEAATRARHALESDLRAALTNGELELHYQPIVDSSTGAIVSCEALLRWHHP 562 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G + P F+P+ L + VL + P +VN+ P Sbjct: 563 VSGYIPPSDFIPVAEDTGLIVQLGNWVLNEACREARKWPST---VSVAVNMSPRQFGDPQ 619 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +A +I R + + LEITE + I +L + G R++IDDFGTGY++ Sbjct: 620 LAFHVIGALNRSGLPAHRLELEITESVTLGATHKIVETINKLRQLGIRLSIDDFGTGYSS 679 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+ D +KID FV D+ I+R+I + ++ +++V E VET+ Q ++L Sbjct: 680 LSSLRNFAFDKLKIDRSFVSDLDRKAESTAIIRAIVGMGRSIGMAIVVEGVETETQLSIL 739 Query: 709 HKLGVQYLQGYLIGRPQPL 727 G +QGY+ RP Sbjct: 740 RTEGCDLIQGYVFSRPVAA 758 >UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7B5_ALHEH Length = 735 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 97/566 (17%), Positives = 200/566 (35%), Gaps = 26/566 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIA 240 + + + D E+R +L +V + L I Sbjct: 154 IQRAAGLVALAVERQLDRRALQEAEQRYRSLFTEHPDAVFQVDLEGRLRAANRSATRLIG 213 Query: 241 GYLVPVF-FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + + R AV +Y ++ L + Sbjct: 214 LPESELLGRHYHAFVFSEDRRRSDAAFEAVCRGKAQHYEVQARTANGSKVELEITNLPII 273 Query: 299 -ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 V + + R + R A D +T LPN R E Sbjct: 274 VDDRVVGIYGIARDVTLRKQYEARLAYYASHDTITGLPNRREFESRLRHDFYLCRQHNDL 333 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D+ + ++ G + + R L L+ ++ L + G E +++L G Sbjct: 334 LAVLYIDLDDFKPVNDSLGHAFGDQLLVAAARRLERLLGPSDTLSRFGGDEFVMLLPGLS 393 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E + + + R + + + ++ + ++ + +Q+ Sbjct: 394 GEAEALAVADRVLTLFKRSHSLGRHEVHISASIGIALNHRDVKSPEEMVQFANRAMQQAK 453 Query: 467 AHHHVLALDSREEMVSGQTT-KQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEI 522 + + + + L ++ A+ L+L+ QP+ + + + Sbjct: 454 QQGRN-TWRRYAGELGTRAQGEDISLRRDLQEAIAGDQLMLHYQPVVDAATGYLHSVEAL 512 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMP 581 + + G++ P F+PL Q +L + +A + +VN+ P Sbjct: 513 VRWQHPERGLIPPGVFIPLAEQTGQIIDIGHWILHRACRDMADLKARTGRTLPVAVNISP 572 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + + ++ + + + LE+TE ++ E+++ + L G AIDD Sbjct: 573 LQFRRPGFLDNLAQVLSESGLPAETLELELTEGVLMADTEATIDTLAALRSLGVHAAIDD 632 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG+++ L+ L D +K+D F++D+ + A IV+ + +A L+VVAE +ET Sbjct: 633 FGTGFSSLSYLRYLPIDKVKLDRSFIQDVTNSRNTAAIVQGVITMAHHLELAVVAEGIET 692 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPL 727 + Q+ L G LQG+ RP PL Sbjct: 693 EAQRRDLQDRGCDLLQGFFFARPMPL 718 >UniRef50_B3PKS7 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKS7_CELJU Length = 940 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 110/559 (19%), Positives = 208/559 (37%), Gaps = 27/559 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF--- 248 + + + + + A +L+ ++ I GY Sbjct: 358 LAALAIETTRAENRLQLTACVFSHAREGILITDAQGNIIEVNTTFTDITGYTRDDVIGKN 417 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCL 305 F L ++ + Y + ++ + Sbjct: 418 PRLLQSNKHDAVFFERLWHSLVNEGAWCGEIWNKRKNGDLYVASMTISAVKDSRGQITHF 477 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + + R+ A D LT LPN L + + + Sbjct: 478 VDLFNDITHIKEHQRQLEHIAHYDALTHLPNRVLLADRMKQALLHSQRSGLSLAVMYIDL 537 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ YG + + +I +++E++ L ++ G E ++VL+ E Q + Sbjct: 538 DGFKAINDQYGHDLGDQLLVAISSRFKSVLRESDTLARIGGDEFVVVLNELEQPAAYQPV 597 Query: 418 VNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 ++ L + + + L + + + + L+ + Sbjct: 598 LDRLLATAADPLILRDQALRITASIGITLYPSDTADAEQLIRHADQAMYLAKQRGKN-GW 656 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + T Q L IR AL+Q + +L+ QP N G + ++ G Sbjct: 657 HLFDVDRDVATKHQYESLERIRLALEQREFILHYQPKVNMKTGALVGAEALIRWQHPTRG 716 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 +++P +FLPLI + + V+++ L + + SVNL L L Q A Sbjct: 717 MISPGEFLPLIEEHPIGLDVGEWVIDTALSQIEHWQREGLALPVSVNLCALQLQQGRFAQ 776 Query: 592 RIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 R+ L + + ++P + LEI E A ++ + + G R A+DDFGTGY++ Sbjct: 777 RLSELLQAHPDVAPGQLELEIVETSALADMTDVANTMRACNALGVRFAVDDFGTGYSSLT 836 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL A+ +KID F++D++ + D IV+ + LA+A V+AE VE+ +L Sbjct: 837 YLKRLPAETLKIDQSFIRDMLDDPDDFAIVKGVISLAQAFHRQVIAEGVESVAHGEMLIP 896 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG + QGY I RP + Sbjct: 897 LGCELAQGYGIARPMLAGE 915 >UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protein n=4 Tax=Legionella pneumophila RepID=Q5ZZI1_LEGPH Length = 985 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 90/581 (15%), Positives = 210/581 (36%), Gaps = 30/581 (5%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA---LSVL 226 + L L + R I ++ R+ ++ Sbjct: 404 VRLAVFNATGEKLVLAIVRDITLQKRSEATIRKLTRALEQSPVLVIITDKTGTIEYVNAK 463 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGV 285 ++ + + + G + G+ + W ++ + Sbjct: 464 VIEQTGYRKEELVGGNTRIL-------RSGQTPHEIYKTMWEHLANGEEWHGELLNKNKS 516 Query: 286 ETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--- 339 + ++ I++ + + L ++ + + QA D LT LPN Sbjct: 517 GEHFWVSAIISPIRNDNEEITHYLAVMEDVTQKKSYEEMLKHQATFDNLTNLPNRLYAVN 576 Query: 340 -LEQAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 LE+A + L +D + ++ G + ++++ L ++++ + + Sbjct: 577 KLERAISKSHINNQKLAVLFLDLDEFKQINDSLGHAIGDLLLKALSERFLSMIRQTDTIA 636 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E +++L + + + + S+ + L + + + + Sbjct: 637 RLGGDEFMMILENIMQDKDAESIAKKCREICSQPFVIESQELLVSTSIGIAIYPEHGKDA 696 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ QS + + + + + A + +L + QPI Sbjct: 697 KTLMRNADTAMYQSKIRGKN-NWTVFQNTMIEGANNHIRIKTELHQAFTRNELYICYQPI 755 Query: 512 RNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP- 567 + + +L G + PD+ +PL + + +L+ + Sbjct: 756 IELKENKVVAAEALLRWQNTTLGQINPDQIIPLAEETGMIIPLGYWILDKVCTQAKEWEF 815 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + +VN+ L L QK+ ++ + KR +S ++I E+TE +++ + + Sbjct: 816 ITGSKIKVAVNISTLQLKQKDFIHKVQLILKRTKLSADSLIFEVTESAFIDDSKFILSQL 875 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G ++DDFG GY+ + +K +KID VF++ + TN + ++ SI +A Sbjct: 876 NKLSDMGIHFSLDDFGVGYSFLQYIKSYPFKNLKIDRVFIQGVNTNHNELSLINSIITMA 935 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + LSV+AE +ET +Q L+ + +QG+ +P Sbjct: 936 RNLKLSVIAEGIETAEQLELMRSMNCDMVQGWYFSKPLSGD 976 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 40/165 (24%), Gaps = 10/165 (6%) Query: 171 SLFTAVLIYNMLFYYLT-RMIVSPHFAQILWRRDIA--PSLGKEKRAFTLSWLAALSVLL 227 S + A I + R+ Q + + E+R L A + + Sbjct: 273 SYWVAQTIIVPVMDDELGRITQHIAIKQDITEQVHRFNQLKISEERYRNLMNAVADGIFI 332 Query: 228 L-----LLCTPYENDFIAGYLVPVFFIIFTLGVGK-LRYPFLNLTWAVSTLCLLNYNQNF 281 L Y + + LN W +N Sbjct: 333 HNLQGAFLEVNEAACLSLNYSREELINSYVWDIEVGFSQESLNQLWENVQKGPINTEGMH 392 Query: 282 LQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQ 325 + T + + LAV + L+ +VR + Sbjct: 393 RRKDGTTFPVDVRLAVFNATGEKLVLAIVRDITLQKRSEATIRKL 437 >UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=10 Tax=Bradyrhizobiaceae RepID=Q07VI3_RHOP5 Length = 750 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 114/554 (20%), Positives = 201/554 (36%), Gaps = 32/554 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA------GYLVPVFFIIFTL 253 R DI +E L + +++ L + D GY F + Sbjct: 181 LRIDITELKQREASFRLLFDANPVPMIVCALDSERIIDVNDAAVKHYGYSPADFRSL--- 237 Query: 254 GVGKLRYPFLNLTWAVSTLCLL--NYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMV 309 +G L+ + W ++ T LA L LL ++ Sbjct: 238 TIGDLQAFEADRPWTGDHSNDECTARTWKHVRADGTLIDLAVYSRQLTYAGQPAALLALM 297 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 + R D LT LPN +L + + L IDN + Sbjct: 298 -DITERKRAEMRLAFMTQHDSLTGLPNRNSLRKKLDQMLVSSRRSTEKIALHFLGIDNFK 356 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + +RSI R L ++E + + +L E ++ SG + + + L Sbjct: 357 AVNDSLGHAVGDKLLRSISRRLRSTLREEDVIGRLNSDEFAILQSGVQNPEDVVLLAKRL 416 Query: 422 NS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L + + + + L ++ + E Sbjct: 417 LHAIGEPFILEGHSLVVSASMGIAMVPTDGDDSEKLFMSADMALSKAKNEARG-SYSFFE 475 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + + + + +R A+ L + QP+ + G + ++ + G+++P Sbjct: 476 PGMDARAQTRRKIEFELRQAIQHDVLRPHYQPLIGLNSGRITGCEALVRWPHPERGLVSP 535 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ + L QVL A P R ++NL PL N+ ++ Sbjct: 536 AEFIPVAEETGLINPLGTQVLRRACLDAAAWPD---DVRIAINLSPLQFRVGNLLSVVMD 592 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 K+ +SP+ + LEITE + + + L G RI++DDFGTGY++ L+ Sbjct: 593 ALKQSGLSPKRLELEITETLLLEKSSQVIATLHALRALGARISMDDFGTGYSSLSYLRSF 652 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IKID FV+ + N IVRSI L +++ AE VET+ + L G Sbjct: 653 PFDKIKIDQSFVRGVCDNRELQAIVRSIISLGMGLGVTITAEGVETEAELNWLRAEGCHE 712 Query: 716 LQGYLIGRPQPLAD 729 QG+L +P A+ Sbjct: 713 AQGFLFSPARPDAE 726 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 104/633 (16%), Positives = 205/633 (32%), Gaps = 37/633 (5%) Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY 185 + I+ + L K D + L + Sbjct: 320 LRFFVGLDAAIEAGLSLTRIADQPRDKHREVLDDCFRALARDGDIRLADGRWLRVSRSAT 379 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---------------LL 230 ++ + + R + + L + Sbjct: 380 RQGGFIAVCSDISVLKEQERRLTQTNLRLDAALDTMSQGLCLYDGQSRLMVVNRRYSEIY 439 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ-GVETEY 289 P + V G L + +F + Sbjct: 440 GLPPGAVVPGMTALEVLSASLAAGNHPGCDLEALLRQQRDAFSNGAWQTHFQELSNGRIV 499 Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---- 345 ++ A + R A D LT LPN A+ Q + Sbjct: 500 AIDRREAA----DGGFVATYEDVTERRRAEARIAFMAHHDMLTGLPNRVAVGQQIDVAVA 555 Query: 346 ---QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 ++ G + + +D+ ++ G + + ++ L ++E + + +L E + Sbjct: 556 QAGRDQGFAVFAIDLDDFRPVNETLGHGIGDELLVAVANRLTACVREIDCVARLGADEFI 615 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 +V G + + + + + +G + LL Sbjct: 616 VVQRGVDRPEDAAILARRIIEVVGAPYSLTHHTISVGLTIGITLAPSDGSNADKLLKNAE 675 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EG 516 ++ A E + + + ++ +R AL + +Y QPI + Sbjct: 676 VALDRGKTEARG-AFRFFEPAMDARLIARRIMERDLRDALAREAFEVYYQPIYSLETDRI 734 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G++ +L G ++P +F+P+ + L VL + A P + + + Sbjct: 735 CGFEALLRWNHPVRGFVSPAEFIPIAEELGLIVPLGEWVLRRACEEAARWPDE---LKVA 791 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + ++ + +R + + + LEITE +N ++ + L G R Sbjct: 792 VNVSAVQFTSASLVTAVREALRRTGLPGRRLELEITETVLVANPGATTAILHSLRALGVR 851 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY++ L+ D IKID FV+D+ IVR++ L + ++ A Sbjct: 852 VAMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRDLCVKDGTDFIVRAVIGLGASLGMTTTA 911 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+ Q A L G +QGYL RP P+++ Sbjct: 912 EGVETEAQLAHLRAEGCDEVQGYLFSRPVPVSE 944 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 97/437 (22%), Positives = 186/437 (42%), Gaps = 16/437 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + + + D LT LPN ++ + + +D Sbjct: 268 ALQSEVASRQEVEQTLSHVITHDALTGLPNRSFFQEDLAQAILRAQRANKYLAVMLVDLD 327 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ + ++ + L++ + + G E +++L PE+ + + Sbjct: 328 QFKKINDTLTHSAGDQLVVALTKRFNTLLENEISIARAGGDEFMMLLENPESVDEVIAIA 387 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 N + + + N+ + + + + + L+ ++ A Sbjct: 388 NRIMACMKQPFTLNDEEVFITCSIGIAVYPEGGVSAEDLIRNADAALYRAKAAGRN-GYH 446 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGI 532 + + K++ L +R A+++ +L L QP N + G + +L + + G Sbjct: 447 FYTTGMHAEALKRLELDRWLREAIERNELSLAFQPKVNLKTRDYTGAEVLLRWYRPEQGF 506 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAG 591 ++P +F+PL + L + V+ + L+ R ++NL + L K + Sbjct: 507 ISPAEFIPLAEETGLIKELGMWVVRRACQQLSEWRGTPLSHIRLAINLSAIQLEDKELVH 566 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 +I L + + + P+ + E+TEE N ES+M ++ +L K GFR++IDDFG GY++ Sbjct: 567 KIDNLLREFDVPPRQLEFELTEEVFIQNIESNMAHLNELIKMGFRLSIDDFGVGYSSLAY 626 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK IKID FV + TN D +I+ ++ +A +LSVVAE VET+ Q A L K Sbjct: 627 LKHFPISCIKIDRSFVSQLETNADDRVIINAVIAMAHNLNLSVVAEGVETEAQAAYLQKQ 686 Query: 712 GVQYLQGYLIGRPQPLA 728 G QGYL +P P Sbjct: 687 GCDEAQGYLFAKPLPPD 703 >UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QR24_9BACI Length = 842 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 129/753 (17%), Positives = 268/753 (35%), Gaps = 45/753 (5%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 +VV + + + + L + + F R + Sbjct: 80 LWYSVVFLIVGIIDLLHTLSYKGMPGLIVVESSPQKATWFWVAARLTQACMLFFIIFFPD 139 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY--GLTSRYVWQRLFWLGLVTPIG 135 S + + + S +V++ + I+R++ G + + L ++ ++ Sbjct: 140 RQVQSRQKKTMFIFSVLYVLVISYIIIRYEQKLPILVVDGKGTTNLKNFLEYIIILFYAS 199 Query: 136 IKCSMYLVG------SFFDFPLKISTFFGDADAIFT---VVDLLSLFTAVLIYNMLFYYL 186 + + D L V DL + + Y++ Sbjct: 200 TAYMLLCSYKKQPKKAHLDLILAFVFLILSEFLFTLYKNVYDLQNFLGHLYKGISYIYFM 259 Query: 187 TRM-IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIA 240 + I + ++ +EK T++ V++L + E + + Sbjct: 260 KGIYIATIKEPYDAQKKAEEELKKREKYLKTITSSLGEGVIVLDKDKKITFINQEAERLL 319 Query: 241 GY------LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYSLA 292 GY +F I + + L F++ T +A Sbjct: 320 GYQKNELLGKALFQKIHCGSEHQCDSLRECPLCQTAELKKAYRVEEDFFVRKDGTLLPIA 379 Query: 293 FILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 ++ +I + ++ + R + + + QA D LT LPN R L + Sbjct: 380 YVSTPMIDDNGEVIGSVIVFRDITERKKYDEKIKYQAYHDALTDLPNRRYLIEKLKNELK 439 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 E + + L +DN + ++ +G +M ++++ + L ++ + + +L G E Sbjct: 440 KAEEHNSRIAILYLDLDNFKNINDSFGHVMGDLLLKNVAQRLT-MIHPDCFIARLGGDEF 498 Query: 402 LLVLS--GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++LS E + LN + I N + + + + + L+ Sbjct: 499 AVLLSGNDFNIEEIACKTIQSLN-QPIKLENKEVFITTSVGISVYPKDGDDEMTLIRHAD 557 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 + + Q ++ + +RTA+++ ++ L QPI + K+ Sbjct: 558 MAMYDAKKKGKNQ-FSFYTAELEQQKIRKSKIEQLLRTAIERKEVSLCYQPIIDTVSKQI 616 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRF 575 G + + + G + ++F+ + + +L++ L+ L Sbjct: 617 IGLEALARWNHPEIGDIPANEFIAVAEENGQIVSLGKHILKTALQHLKQLHEIGFDYLYV 676 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 SVNL L I +L ++ + + +EITE A S+ + ++NI++L G Sbjct: 677 SVNLSLRQLRHHEFTALISQLLQKNKLQASHLEIEITEHIALSDEKCVIHNIQELKDIGV 736 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 RIAIDDFG G ++ L+ D +KID F+ D+ TN A + ++ A +L VV Sbjct: 737 RIAIDDFGVGCSSIGYLRTFSVDTLKIDKSFIFDVATNPNTAQLTSALITFAHNLNLQVV 796 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE+ +Q L + +QGYL P Sbjct: 797 AEGVESAEQLCFLEQHHCNKIQGYLFSPPVSFE 829 >UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBP4_CHRVI Length = 648 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 108/581 (18%), Positives = 213/581 (36%), Gaps = 41/581 (7%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRA-----FTLSWLAALSVLLLLLCTPYENDFIAGYL 243 +I + Q + ++R S+ L + L++ Sbjct: 59 LIENLRIYQAELEIQNEELVQSQQRIQEALARFSSFFNTLPIAELVIDRQGLIHEANLAA 118 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----------NQNFLQGVETEY---S 290 +F + T + + + + + F E ++ Sbjct: 119 QQLFHLRGTQFHQHFFVRLIAESDQATVVSAWDSLHADAAIVIPEVRFRAKGEADFIGDL 178 Query: 291 LAFILAVLISFSVCLLYMVRIYHR-------SEWLNRRWHLQALTDPLTLLPNFRALEQA 343 +A L ++ + + + R A D LT LPN + Sbjct: 179 HIASIASLAEGALHYVCAIIDRTEAVRQRQRLREASERLDYLAHHDALTGLPNRAYFQSR 238 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 EQ + + L +D + ++ G + + + L +++ + + + Sbjct: 239 LEQCLQRAKRYQRRFALLFLDLDRFKEVNDTLGHHVGDALLCRVAEILSAQIRDVDTIAR 298 Query: 396 LPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E +++L + H V+ + SR + + + + L+ Sbjct: 299 LGGDEFVIILEDISEPRFIMHFVDRVMDDFSRPLRLEGREFFVTVSVGISLYPDDGLDLE 358 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ + Q+ E +S +++ L + +R A+ + + LY QP Sbjct: 359 TLVRRADIAMYQTKKSGRN-GFSFFEPTMSAGAIERLHLEHDLRLAMQREEFELYYQPQV 417 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + E G + + G++ P F+P+ L L++LE + + Sbjct: 418 DLITGELMGVEALCRWRHPQLGVLLPGLFIPMAEDLGLIDELGLRILELGCRQMVAWDAS 477 Query: 570 KKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 R +VNL L + + ++ + +R + P+ + LE+TE + +AE ++ + Sbjct: 478 GLNVPRLAVNLSVRELERLQLPAQVAEILERTGLDPRRLELEVTESKLMRHAEMAILALN 537 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L G +AIDDFGTGY++ LKRL + +KID F++ + + D I R+I LA Sbjct: 538 ALRALGVTLAIDDFGTGYSSLSYLKRLPLNRLKIDRSFIEGLTHDVNDDSIARAIIALAH 597 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE +E ++Q L G QGYL RP + Sbjct: 598 TLGLEVLAEGIEAREQANFLFGEGCLQGQGYLYSRPMIAEE 638 >UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6X9_KANKD Length = 855 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 105/595 (17%), Positives = 213/595 (35%), Gaps = 29/595 (4%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 ++ ++ L VL+ + ++ R L Sbjct: 259 PRLPKLWKWALIIGLGMIVLMLCINGILRWQVRKRTRLLVETNVRFNHLLKASPV---VL 315 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV---GKLRYPFLNLTWAVSTLCL 274 L V + + GY + + R L+ + Sbjct: 316 YQLKQDGVGYKPVWVSKNVKRLFGYEPEQLYSHDWWIGVLYEEDRQKTLDQFKEIFITGH 375 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + + + ++ + ++ + DPL Sbjct: 376 MVHEYRVRDAEGNTRYIRDERQLIPQSNHSENEIVGTWSDLTDVYEREDELKFLSHYDPL 435 Query: 332 TLLPNFRALE----------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 T LPN + LE + + + ID + ++ + I I Sbjct: 436 THLPNRQKLEERIEESIERSDEL--KECFAILSIDIDRFKKINETLSYQVGDAVIARIAE 493 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYG 438 L ++ ++ L ++ G + + V++ ++ + + R + + L + Sbjct: 494 RLKHILNVDDVLARVGGDDFVFVINDKVDVKKVSSIARKVLKRFAVPLRIDEHELMVTAS 553 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F + LL + + + + +S + ++L + +R A Sbjct: 554 IGIAMFPEDGRDPDTLLKNAEIARYSAKDKGRN-SFEFFNDQLSEGMHENLMLESALRMA 612 Query: 499 LDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ +L+L+ QP+ + G + ++ G++ P KF+PL + + L V Sbjct: 613 VERNELVLHYQPLVSFNDFTVVGVEALIRWQHPIQGLIPPYKFIPLAEETGIIGDIGLWV 672 Query: 556 LESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + + R SVN+ + + ++ + K ++ + + LE+TE Sbjct: 673 LREACRQMVEWDKAGLNVARASVNISVQQIETGLLPKQVESVLKETGLAAERLYLELTES 732 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + + + + + K G ++A+DDFGTGY++ LKRL D +KID F+KDI +T Sbjct: 733 TIMQDPQQASLAMTEFQKMGVKLAVDDFGTGYSSMAYLKRLPLDRLKIDRSFIKDIGADT 792 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D +I ++I LAK+ L VAE VE + Q L LG QGYL +P P + Sbjct: 793 NDEVICKAIVQLAKSLGLETVAEGVEEESQAEFLKGLGCDVAQGYLYSKPVPALE 847 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 109/607 (17%), Positives = 210/607 (34%), Gaps = 26/607 (4%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 L + + + +AD + + A+ I +LF +MI +F + Sbjct: 25 AALTIAIVAVLFCAAALYRNADPVLEWTSSMIAVLAIAITAILFARNGQMIGFRNFHTPI 84 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + + ++V D + L P+ R Sbjct: 85 VETLLQSEAVPLAILDRDGVIMEMNVASSNTLGYIRQDLLGKPLAPLLEPGS-------R 137 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEW 317 + N N L I + + + + + + + Sbjct: 138 NSLQEMLDHALQGKSEQRNINITHRSGFPLELQIISSPMMREDEVIGTVIVSQDLSDRKR 197 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGL 369 R A D +T LPN E + C L +D + ++ +G Sbjct: 198 NIERIRYMAYYDDMTGLPNRTLFHIRMNESLAFAREHDRMIGLCYLDLDRFKLVNASFGR 257 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQI 426 + + L + E + ++ G E L+L E+E +L + Sbjct: 258 EFGDMLLLQVAERLTRAIGEQGIVARMEGDEFALLLQDIESEEQLMELSRGMLHAIDEPF 317 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 L + ++ LL + + + E S + Sbjct: 318 ELKGFPLHITGSLGAVTSLVKEDDGYSLLKKADIALVKVKESGKNDCM-LYSESWSNSSF 376 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 +++ L + + A+ + + +L QP + G + ++ G++ P +F+P+ Sbjct: 377 ERLTLQHEMYRAIQRKEFILLYQPQYDLVSGMMVGVEALVRWRHPAKGMIPPGEFIPIAE 436 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + + + VLE + SVNL +Q+++A ++ + ++ + Sbjct: 437 ESGMIVQIGDWVLEEACRQNKAWQDAGLPPMPVSVNLSIRQFVQQDLASKVASVLEKTGL 496 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 P+ + LEITE + + +L G I++DDFGTGY+++ LK D +KI Sbjct: 497 KPEYLDLEITESMTM-DTGHVSRCLLELTDMGVGISVDDFGTGYSSFHYLKNFPIDRLKI 555 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+DI + DA IV +I +A ++ V+AE VE +Q L K +QGY Sbjct: 556 DRSFVRDIQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRKHNCDEMQGYFWS 615 Query: 723 RPQPLAD 729 P D Sbjct: 616 PPVSSTD 622 >UniRef50_C3X4C3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4C3_OXAFO Length = 905 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 98/538 (18%), Positives = 190/538 (35%), Gaps = 26/538 (4%) Query: 217 LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF------IIFTLGVGKLRYPFLNL 265 L + + + + + G + + ++ Sbjct: 361 LFENNRDGIFIADQDRRITVVNRQFSRMTGLTQEKIMGNKPWYLQADIADSTCYSQLCDV 420 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + +N + +E + I+ + + + + ++E+L Sbjct: 421 IACTDHEEMAAFEKNRQEKIEPTHLTVKIVRDMDDRIISYIGTLLDISQNEFLEDHTRYM 480 Query: 326 ALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 D LT LPN L Q + L +D + ++ G M ++ Sbjct: 481 IEHDFLTGLPNRILLLDRLGQTLIAAERNRRRAAVMFLDLDRFKHINDTLGHAMGDRLLQ 540 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 + L +++N+ + + G E +++L+ + + N + S+ N + Sbjct: 541 QVAFRLTKCVRKNDTVSRQGGDEFVILLNDIGNADDVALVANNIMHALSQNYQIENYEMS 600 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + + + + LL + A ++ ++ L N Sbjct: 601 ITPSIGIALYPEDGKDIDTLLKNADTAMYHAKEGGRN-AYQFFNAQMNLHLVERTRLEND 659 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 ++ AL L QPI + G + L + GI+ P +FL + L Sbjct: 660 LKAALQNSGFFLEYQPIVDTQSGHMTGVEAFLRWNHPEFGILMPPRFLGVAEDTGLIGPI 719 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ + K S+NL + L QKN+ I K ++P + L+I Sbjct: 720 GEWVIRTACKQAGEWRDQGFPKTVSINLSSIQLKQKNLLSTIRNALKENGLAPDFLELQI 779 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N ++ + +L G RI +D+FG G ++ LK+ IKID VF+ + Sbjct: 780 TEGSIMENVKTVSDLLHELRAMGIRIVLDNFGNGCSSISHLKKAPIGKIKIDPVFIHALG 839 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T + DA + +I +AK L V A VET Q L ++G QGYL+ + Sbjct: 840 TGSEDADVAGAIVAMAKNLRLKVSAGGVETDLQALRLKEIGCDEYQGYLVSPSLSAGE 897 >UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacillus RepID=B9IRT3_BACCQ Length = 909 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 123/739 (16%), Positives = 254/739 (34%), Gaps = 43/739 (5%) Query: 13 IFTLAFT-LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 T T L LI ++ PL+++ L S L ++ Sbjct: 171 QLTYPMTDLLFFLIGINLLFKPLSLLPKKVGALLG-------SALILY-----ATTDAIY 218 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + S + +V AC + + + + L L Sbjct: 219 AYIKYFTPEYSMFTITPLYQVTLVLVAIACIL--HTKEPERQEQVLLTPKFGEAIRLSLP 276 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT-AVLIYNMLFYYLTRMI 190 + ++++ + P+ + + L+ +L+ M F Sbjct: 277 YISVVMLIVFILVEYVFAPIIVIGLMITFSFVLIRHSLVRKQNKILLLAQMQFNSELEKQ 336 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP----- 245 + ++ +++ ++ +L + L L + AG + Sbjct: 337 IELRTEDLVEQKNE--LYHNQQMFKSLYEHHPDPIFTLDLYGNFLKVNNAGTTLLGYQTN 394 Query: 246 --VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISF 301 + ++L + +N V ++ Y L + Sbjct: 395 ELLNQPYYSLTYEEDLEEIVNAFHRVKKGKSISLEIRAYHKNRDIYYLHVTAVPIFLKDH 454 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 + M++ S+ + + A D LT L N RA Q EQ + Sbjct: 455 ISGVYLMIKDITESKQQQEQINFLAYHDTLTELANRRAFHQYVEQAIARSKISKMPFAVM 514 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G + + ++ + L + N KL +L G E +++ + Sbjct: 515 FLDLDRFKVINDTLGHRVGDLLLIAVAKRLESIATPNMKLARLAGDEFTILIENYKKRPD 574 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 ++ + + + + N L + + E +L ++ Sbjct: 575 VKKIADTIVAAMNEPFEIENQHLQISPSIGIAIYPEAGEDPLSILQHADMAMYEAKNKGK 634 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 + + + + ++ + + AL + L QP + K+ G + +L Sbjct: 635 NGS-SLYTKELYKKMERKARIEKDLPLALVNEEFYLVYQPQIDITTKKIIGAEALLRWKH 693 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQ 586 G + P +F+P++ + VL + L + SVNL Q Sbjct: 694 PLLGDIPPCEFIPIVEETPQVIPLGHWVLNESCRQLKIWHTFGYKDLKISVNLSAKEFQQ 753 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N+ I+++ + P+ V LE+TE A + + ++ ++QL ++G + +IDDFGTGY Sbjct: 754 NNLIENILQIITDVKVDPKDVTLELTERIAMIDEKETLSKLKQLKEYGIQTSIDDFGTGY 813 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L D +K+ F + + IV +I LA +LSVVAE +ET++Q Sbjct: 814 SSLAYLSIFPIDTLKVPREFTQLADHRPEERAIVSTILSLANTLNLSVVAEGIETEKQLK 873 Query: 707 LLHKLGVQYLQGYLIGRPQ 725 L K +Y+QGY +P Sbjct: 874 FLQKNNCKYMQGYYFSKPL 892 >UniRef50_Q5P826 Response regulator receiver protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P826_AZOSE Length = 638 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 99/584 (16%), Positives = 202/584 (34%), Gaps = 20/584 (3%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + ++ R ++ FA IL ++ G E + Sbjct: 23 AALLETAAERLRFTIMTARSGEEALRQLLEHEFATILLDVNMPGLDGFETARLIHGRPRS 82 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 ++ ++ L ++ + + LC Sbjct: 83 AAIPIIFLTAHRSDELDRIKGYEAGAADYLFTP-LVPQVLQAKVGVFVELCRQRRELEHK 141 Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + + + L + + AL D LT N R+L Sbjct: 142 AALLADLNRELQVQRLEDLERANAALQTEVAERRGAEKLARELALRDTLTGFFNRRSLND 201 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 Q + L +D + ++ G ++ + L ++E + L Sbjct: 202 RLARAISVAGHQNDRLALLFLDLDRFKRVNDSLGHDKGDELLKQVAARLRCAVREADTLA 261 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E +++L + + ++ + + + + + + Sbjct: 262 RFGGDEFVVLLENLHDRDDAAQVAIKICAALAQPFELGASTVKVSASVGVSLYPDDGASA 321 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ ++ + E ++ + +++ + ++ AL+ + LY QP Sbjct: 322 SVLMKNADLAMYEAKQMGRN-GHEFYREELNRRLLERIRHEHELQQALENDEFELYYQPK 380 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 N G + +L G ++ ++F+ L + + L + + Sbjct: 381 VNVVEGTIAGMEALLRWHHPQLGFLSAEQFMGLAEEAGMLVPLGEWALRAACRQARQWQD 440 Query: 569 DK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + R +VN+ L + + RL + +SP + LEITE + + + Sbjct: 441 AGWLEETVRIAVNVAEPQLYSA-LPDTLARLLDEHGLSPAHIELEITETLLMRDVDHAAS 499 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + Q+ G IA+DDFGTGY++ LK L I+KID FV+D+ + IV +I Sbjct: 500 VLAQIGATGVSIAVDDFGTGYSSLAILKALPIHILKIDQSFVRDLPHDRDTHAIVTAIVQ 559 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A A L+V+AE VE + Q L +LG QGYL +P P ++ Sbjct: 560 MAHALGLNVIAEGVENEAQLGALRRLGCDEYQGYLYSKPIPASE 603 >UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1V4_BACS4 Length = 840 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 104/559 (18%), Positives = 206/559 (36%), Gaps = 24/559 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I A + + + W +S ++ C+ L + Sbjct: 268 DITEQKEANQRLVDNEKQARIIFNNLDEIIWSIDISSRKVIFCSNGFEQLFGYCLDDLID 327 Query: 249 IIFTL---GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + +S L + + +I Sbjct: 328 ERQLWQKVIHEEDIKGIPEKLITLSQGNQLKFECRVQHTSAEVRWIEIKALPIIDDLGDF 387 Query: 306 L---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCC 354 + ++R + L+ + H A D LT LPN R+ A + ++ S Sbjct: 388 IRVDGIIRDITEKKKLDAKMHHIAHHDHLTNLPNRRSFDIKLHELIHHAKKTKSIFSVFY 447 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L ID + ++ G ++ I L ++ ++ + + G E ++L TE + Sbjct: 448 LDIDRFKHVNDMLGHNYGDDLLKEISYRLKQVL-QSHFIARTSGDEFAVLLHDV-TEEEV 505 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + H + + + + E LL + Sbjct: 506 IVFAHNIVNVMRQAFHISEVESYVTASIGIAFYPKDGENAVTLLKNADTALSFAKIDGKD 565 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ + L +R AL++ + L QP + K+ G + ++ Sbjct: 566 -NYKHYIPEMNEDSHNIYFLEKDMRLALEKEEFYLEYQPKIDVKTKKVIGCEALIRWTHP 624 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 GI++P +F+P+ + +L V++ + K L + S+N+ LL+ Sbjct: 625 KRGIVSPAQFIPIAEESDLICDIGNWVIKKVCKQLKKWHLEGINTVPVSINISAQHLLKT 684 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ I K H+SP + LEITE +S I L K G ++++DDFG GY+ Sbjct: 685 SLLDTIFTALKANHVSPSLLELEITETSLIQPNQSVFSTIRSLKKLGVKLSLDDFGVGYS 744 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + +++ D +KID F+ + T DA+I+ SI ++A L+++AE VET++Q Sbjct: 745 SLTHIRKFPLDTLKIDKSFISKVPTEKDDAVIISSIIEMAHGLGLTILAEGVETEEQLLF 804 Query: 708 LHKLGVQYLQGYLIGRPQP 726 L + ++QG+L +P Sbjct: 805 LEEKNCDHIQGFLFSKPIS 823 Score = 43.4 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 15/154 (9%), Positives = 36/154 (23%), Gaps = 10/154 (6%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW----LAALSVLLLLLCTPYENDFI 239 Y + R I + + A SW + + D Sbjct: 134 YGVIRDISQLRIYEKNLSFIERSLNNAQYIANIGSWDYDPHNDKLYWSKQMFRIFGLDEK 193 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + + + + + A+ NY + + + +I Sbjct: 194 TNTAPSMEQYLKYVHHDDRLRDIVAIQDAMEKKKSFNYESRIFRKDGMKRIVKIQGNPII 253 Query: 300 SFSVCLLYMV---RIYHRSEWLNRRW---HLQAL 327 ++ ++ + N+R QA Sbjct: 254 DNEGNVVKIIGNTHDITEQKEANQRLVDNEKQAR 287 >UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative n=2 Tax=Cyanobacteria RepID=B0CC32_ACAM1 Length = 886 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 104/591 (17%), Positives = 208/591 (35%), Gaps = 34/591 (5%) Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQ-----ILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + A Y + I + Q + + P + + + S Sbjct: 281 GVVQATAAYLAKQAGGLQQINARRQIQFSIKGQRYFLQVTPLQDQHGLDWLSVLVIPESS 340 Query: 226 LLLLLCTPYENDFIAGYLVPVFFI-IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 + + + +L I + + P L + A + ++Q Sbjct: 341 FMAQIDANTRTTLLLCFLALGCAIYLGVCTASWIARPILRFSQASQAISSGQFDQTVAVK 400 Query: 285 VETEYSLAFIL---------AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 E + A L + + + ++ AL DPLT P Sbjct: 401 GFKEIGVLQQSFNRMAEKLQATFSDLEAANLALTKEVAERQRAEEQFKHLALHDPLTGFP 460 Query: 336 NFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N + E+ + + +D + ++ G + + +I L L Sbjct: 461 NRAFFMEQLERAVKQTQRHSQYLFAVLFIDLDRFKIVNDSLGHEVGDQLLGAIAHQLHSL 520 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGR 443 ++ + + +L G E +++L E + + + S I +N + + Sbjct: 521 VRATDIVARLGGDEFVILLEPIEEVNDAVRVADRIVQELSAPIDLSNRQVFISASVGIAL 580 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + +L ++ + E + Q ++ L N +R A+ Sbjct: 581 SSPDYSQATDILRDADIAMYRAKNRGKA-CFEIFNERMYTQALDRLQLENDLRQAIANQQ 639 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L ++ QPI N + G++ + G + P +F+P+ + L +L+S Sbjct: 640 LQVFYQPIVNIQTGKLSGFEALGRWPHPQRGFIPPTEFIPIAEETGLIIPLGEWILQSAC 699 Query: 561 KWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + +AT SVN+ L N+ ++ R ++ ++ + LE+TE Sbjct: 700 QQMATWLQTYPSAVKYTISVNMSIKQLKDPNLLTKVDRALEQSGLNRHQLSLELTESILM 759 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 N + QL + G +++IDDFGTGY++ L + IKID F+ I + Sbjct: 760 ENVIELKVILNQLKERGIQLSIDDFGTGYSSLSYLHLFPFNTIKIDQSFITRIGAQGENQ 819 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I+ +I +LA ++ ++E VE++QQ L KL Q QG +P Sbjct: 820 EIIETIINLASQLNMDAISEGVESKQQLNYLKKLLCQKAQGNYFSQPLSSD 870 >UniRef50_B3PF41 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF41_CELJU Length = 805 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 132/740 (17%), Positives = 249/740 (33%), Gaps = 66/740 (8%) Query: 39 SSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVL 98 S+ L + C++L ++F+ G R + ++ G + + L T L + ++ Sbjct: 65 SAIHPLLVVWGCLLLGLIFL-GARPWLILIRGHWRNQVSERSLRRAVTHAGLLGFLWGIV 123 Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 + + + + P LVG + L + Sbjct: 124 PLICAIHSNAANTLIISVVCVGMLCAGGFALATVPKAAILFCLLVGIGSELSLLFNPLLQ 183 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 D ++ S A +I + + R++ AQ + + + L Sbjct: 184 RWDLALLLLVYCSTVIAAVITSARTFGA-RLMAEAEAAQQQQLVSLLLHDFETHASDWLW 242 Query: 219 WLAALSVL------LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 L A L L L + +F + G+G L + Sbjct: 243 ELDANGQLRDPSPRLASLLGRSLEELHEIPFTTLFQMHPEDGLG--GEALSLLRERLRQG 300 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTD 329 + +Q L+ L+ + +R + A D Sbjct: 301 QAFRHLVVPVQAHNKACWWQLSAKPLLDRRGHLIGWRGVGSDVTEQRNAHREMNRLANFD 360 Query: 330 PLTLLPNFRALEQAPEQEAGKSFCCLRI---D-----------NLEFMSRHYGLMMRVHC 375 LT L N +Q + D N + ++ G + Sbjct: 361 ALTGLANRYQFNNRLQQAKTS------LRAEDKLFALLFLDLDNFKTVNDSLGHGVGDKV 414 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTG 432 ++++ + L +++++ L +L G E L+ G + + + L + Sbjct: 415 LQAVAKRLQKAIRKDDLLARLGGDEFALISWGEDAVSQAGQIAQRLLRCFHEPCQIDGLN 474 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L +G + + + LL + + E + +++ LL Sbjct: 475 LQIGCSIGIVLAPEHADQPETLLKNADMALYAAKSAGRN-TFQFYERGMGDSAQRRLNLL 533 Query: 493 NTIRTALD------------------QG-----DLLLYAQPIR---NKEGEGYDEILARL 526 N +R AL+ Q + L+ QP + G++ + Sbjct: 534 NDMRRALESVPCIKPLCTYVDPHFRWQDQPLLPEFELHYQPQISLADGRITGFEVLTRWH 593 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + G + P +F+PL + N+ + VL + + P G R +VN+ Sbjct: 594 HPERGTIPPVEFIPLAEESNMIIPLGIWVLVEACRTASHWPA---GWRLAVNISASQFSH 650 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ + R + ++P + LEITE +A S+ + +L G R+A+DDFGTGY Sbjct: 651 GSLVPVVKRALQLSGLAPTRLELEITESLLIQDAHSTRQILGELRTLGVRVALDDFGTGY 710 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 + L+ D +KID FV + + IV I LA A L VAE +E+ Q+ A Sbjct: 711 CSLAYLRSFPLDQLKIDRSFVTALQQDASARAIVSGIIQLANALDLETVAEGIESPQEAA 770 Query: 707 LLHKLGVQYLQGYLIGRPQP 726 +L G + QGYL P P Sbjct: 771 MLRDTGCRLGQGYLYAAPVP 790 >UniRef50_C6P3U3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3U3_9PROT Length = 600 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 95/438 (21%), Positives = 179/438 (40%), Gaps = 41/438 (9%) Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 + A D LT LPN + + L +D + ++ +G + Sbjct: 159 QIKRIAHYDSLTALPNRLLFLDRLDQEVARANRDDQMVAVLSLDLDRFKKVNESFGHPVG 218 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR----QIHW 428 ++++ + L ++ + + ++ E +VL+G + + + I Sbjct: 219 DQLLQTVAKKLSSQIRACDTVARIADDEFAIVLTGVKATHAAGEVAQKILDSFAHSPISI 278 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 +++ + + + + LL Q+ ++ + ++ Sbjct: 279 SDSEVFITLSIGISIYPVDGVNTTALLKSADTALHQAKREGRN-NFQYYTVQMNATSWQR 337 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L +R AL + + L+ QP + + G + +L + G++TP +F+PL+ + Sbjct: 338 LKLETELRQALARNEFELHYQPKVDMDCNKIVGMEALLRWQSAERGLVTPAEFIPLLEET 397 Query: 546 NLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL K +VNL L Q + AG ++++ + + + P Sbjct: 398 GLILPVGEWVLREACKQARAWQDAGIPDVHIAVNLSSLQFRQPDFAGSVLKIMQEHGLDP 457 Query: 605 QAVILEITEEQAF-------------SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 A N ++ + LH+ G R +IDDFGTGY++ Sbjct: 458 -----------AMNGIELELTESLLLDNVARTIDTLNTLHEAGIRFSIDDFGTGYSSLSY 506 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR +KID FV+D+ +N D IV +I L ++ LSV+AE VET +Q A L ++ Sbjct: 507 LKRFPISSLKIDQSFVQDLSSNRDDESIVSAIIALGRSLGLSVIAEGVETAEQSAQLRRM 566 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGYL RP P+A+ Sbjct: 567 GCDGMQGYLFSRPVPVAE 584 >UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F6T4_ACIAD Length = 676 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 118/623 (18%), Positives = 237/623 (38%), Gaps = 33/623 (5%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN-MLFYYLTRMIVSPHF 195 C + + + T + ++F A + + Sbjct: 54 WCKHIQPLLAPALEGHAAQISWQSPFLDTFISYKTVFVAPQYSIDQRIDGILISVFELTE 113 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 + ++ E + + +++ + N+ ++ + Sbjct: 114 QLSIHQQLEKILKDFENYKLAIDAHSIVAITDNRGVITHVNEKFCDISQYEYYELVGTTH 173 Query: 256 GKL------RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 + R F + ++ + Y + + L + Sbjct: 174 KIINSGFHPRSFFKQMWKTIAQGNIWKGEICNRTKQGKLYWVDTTIVPLKDNDGLLKNYI 233 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + + AL D LT LPN R ++ E + + + +D Sbjct: 234 SIRTDITQLKSSEDHAKYMALYDELTGLPNRRYVKDRLKKVIELSKESQHHSAILMMDLD 293 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-------- 410 N + ++ G + ++ + + ++E E + +L G ELL++LS Sbjct: 294 NFKTVNDTLGHDYGDNLLKMVANRVKKCVRETETIARLGGDELLIILSNLSENEEIAQAQ 353 Query: 411 -EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + N + + + N + F+ LL Q+ A+ Sbjct: 354 AQAIAERISNSIY-QPFNLENQVIQTSVSIGIFVFNDASIPQNELLKYADMALYQAKANG 412 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLK 527 + + + ++ + LL+ +R AL + + LY QPI ++ + GY+ +L + Sbjct: 413 KN-CICTFDPLMEQNVISRASLLSDLRQALIRDEFELYYQPIVDQHKKIIGYEALLRWIH 471 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLL 585 G++ P +F+ + +L +VL + L D SVN+ Sbjct: 472 PVRGLILPGEFIEQAEKSDLIHLIGNRVLMMACQQLYQWSQNTDSAHWTLSVNISVQQFR 531 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + + II++ + +P + LE+TE +++ +SS+ +++L + G R ++DDFGTG Sbjct: 532 KSDFEENIIQIIQDSKANPYRLRLELTESMFYTDMQSSIEKMKKLIEIGVRFSMDDFGTG 591 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK L D +KID FVK++V N+ D IV +I +LA L+VVAE VET++Q Sbjct: 592 YSSLNYLKLLPLDQLKIDRSFVKNMVDNSRDIAIVNTIINLAHILDLNVVAEGVETEEQF 651 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L + QGYL GRP P+ Sbjct: 652 ICLTQNQCFTFQGYLFGRPLPID 674 >UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UHK4_RALPJ Length = 1183 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 105/568 (18%), Positives = 191/568 (33%), Gaps = 25/568 (4%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + + + I + R ++ + + Sbjct: 608 VVALFGTMQDITDRRESDEQLRLLRRVVESVPSGITVADAQQPDFPIVY---VNPGFERM 664 Query: 240 AGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY F + + A+ + + + F+L+ Sbjct: 665 TGYRAEEILGRNARFLHSSEPGQPALNEVRTALRDESEIRVLLRNFRKDGHAFLNNFLLS 724 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + E R A D LT LPN L Sbjct: 725 PVRDAKGAVTHYVGIQDDVTEQEMTRTRLAQHATIDSLTGLPNRTLLADRVQQSVEMAAR 784 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 Q + + ID + ++ G ++ +R + L + + + G LV+ Sbjct: 785 QRSRFYVALVNIDRFKVVNDSLGHLLGDEVLRRVAERLRDAADTVDTVARFGGDVFALVI 844 Query: 406 SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 S + G L + + + + + + L+ + Sbjct: 845 SHAGSRGV--DFGFDLFAEPVRVEGHEVFVTASIGVAEYPAHGADADSLIRHAEMAMYYA 902 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + L+ + + ++ L + IR L+QG L QP + G + + Sbjct: 903 KQNGRNR-LEFFAPEMDIGVSYRLNLEHQIRATLEQGQFRLLYQPQIDTKTGRVCGLEAL 961 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLM 580 + + G++ P F+P+ + L VL + A +VN+ Sbjct: 962 IRWIHPTRGLLPPAAFIPVAEESGLIVEIGNWVLTEAARQRAEWHKRGLADDLTLAVNVS 1021 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 PL + + +++L ++Y + + LE+TE E ++ ++ + + G RIAID Sbjct: 1022 PLQFKRGTVLPTLLKLQRQYGLGSGFLELEVTESMLMEGTERTIEDLTAIRQLGVRIAID 1081 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKRL D+IKID FVKDI ++ DA I ++ LA + V AE VE Sbjct: 1082 DFGTGYSSLAYLKRLPIDLIKIDRAFVKDIDRDSNDAAICTTVVVLAHNLGVKVCAEGVE 1141 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q A L LQGY P Sbjct: 1142 DAAQSAFLASHQCDVLQGYYFSEPLLPE 1169 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 13/142 (9%), Positives = 26/142 (18%), Gaps = 5/142 (3%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL--CTPYENDFIAGYLVPV 246 I + R A E+ A SW + G Sbjct: 490 DISQRSAIEQELRSSEANLRVAEQIALLGSWRWDVLRDSTTWSSGMYVLTGMPPGAPPAF 549 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL---AVLISFSV 303 + AV+ + ++ + V Sbjct: 550 AQQAQFFTADSYNRLREAASRAVTEGEAYSLELEMIRRDGEHRWVLSRGNIERNDRDEVV 609 Query: 304 CLLYMVRIYHRSEWLNRRWHLQ 325 L ++ + + L Sbjct: 610 ALFGTMQDITDRRESDEQLRLL 631 >UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31MH3_SYNE7 Length = 1238 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 104/561 (18%), Positives = 213/561 (37%), Gaps = 22/561 (3%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF- 248 + + E ++ A + ++ + I G+ Sbjct: 666 MQDISAIVAANEQLRLWLRAIESTGNSIIIADAQQPDMPIIYVNPAFEKITGFSAAEVIG 725 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 F G+ + + A+ + + + LA + Sbjct: 726 RNFRFLQGLETQQAELEEMRRALEEGTYCEVTLRSYRKDGSLFWNQISLAPVRDQKGHLT 785 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 ++ S+ QA D LT LPN +Q + + + Sbjct: 786 HMVASQTDVSESKAFEEMLLQQATHDALTGLPNRLLFLDRLDQAAARARGGGSPIAVLFI 845 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL- 414 +DN + ++ + ++ L +QE+E + +L E +++L + + + Sbjct: 846 DLDNFKAINDGFSHSEGDAVLQIAAGRLQQCIQEHETVARLSSDEFVILLIDLDVQSKAR 905 Query: 415 --QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 M+ L ++ +++ F + ++ LL + L Sbjct: 906 VKAAMIQSLMAKPFEVMGNPIELTASIGVATFPHDGQSGSELLQAADLAVCAAKQQGKNL 965 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 S E + Q ++ + +R AL L LY QP + G++ ++ + Sbjct: 966 -WCSFSEAMREQLRSRIDIEKDLRQALIDNSLELYFQPQVDLVTHRLLGFETLVRWNHPE 1024 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKN 588 G++ P +F+P+ + +L L V+ + L + S N+ +++N Sbjct: 1025 RGLVAPGEFIPIAEESDLIDAIGLWVMRAAGLTLRRWIDHEGFTGSLSFNISARQFIRQN 1084 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 I ++ + + + I P + +E+TE + E + +++ GF++A+DDFGTGY++ Sbjct: 1085 IFLKLFDVLQEFQIPPHQLEIELTESSLIESPERFVQWLQEARSMGFQVALDDFGTGYSS 1144 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL + +KID F++D+ + D IV++I +AK L +AE VE +Q A L Sbjct: 1145 LGYLKRLPINALKIDRSFIRDLPHDHDDQAIVQAIVAMAKVLKLRTIAEGVERLEQAAFL 1204 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +G +QG+ G P P A+ Sbjct: 1205 EAIGCDAVQGFFYGPPLPEAE 1225 >UniRef50_Q72EZ6 Sensory box/GGDEF domain/EAL domain protein n=3 Tax=Desulfovibrio vulgaris RepID=Q72EZ6_DESVH Length = 1072 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 100/570 (17%), Positives = 195/570 (34%), Gaps = 26/570 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS--VLLLLLCTPYEN 236 R I S + + A+ T + Sbjct: 483 GERTLLVALRDISSRIHTEHRLNLFELVFRNALEGILITDASGAILAVNPAFTTITGWNE 542 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 G R + L ++ + Y ++ Sbjct: 543 RDAVGR-----NPRILKSNRHDRGFYERLWHSLHERGAWEGEIWNRRINGENYPEWLSIS 597 Query: 297 VLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------- 345 + + + + + + Q + D LT LPN L + Sbjct: 598 AIRDESGATTNYVALFHDISDLKAKEAQIRYQGMHDALTGLPNRALLLERLAGELKEGQG 657 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + IDN + ++ G I + L L++ + L +L G E ++++ Sbjct: 658 TGRLCGLLYIDIDNFKTINDSLGHEAGDKFIAEVAEHLTLLIRPEDTLSRLGGDEYVILV 717 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + P E + + + S+ I + L +G + + LL Sbjct: 718 ANPGEEREVVLVAERILHHFSQPIALLDRELHVGLSIGIAIHPADGKGPDELLTNADLAM 777 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 ++ A + + + ++ L +R AL G+++ + QP + G Sbjct: 778 YRAKAQGKN-TYERFSPHLHDRIRSRMELEGRLRHALRHGEIVPHFQPRVDLATGRIVGA 836 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + + DG ++P +F+P+ L +L S L + + +VN Sbjct: 837 EALARWTLPDGTRISPGEFIPVAEDLGLIFDLGEHMLRSSLAFTRALMDEGLPDITMAVN 896 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L + ++ GR++ + + P+ + LEITE S+ ++ +++L G +A Sbjct: 897 LSLVQCRHADLVGRVLAALRDTGVPPERLELEITESAIMSDVTRTLRRLDRLAALGITLA 956 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LK + +KID FV+D+ I ++ +A+ L V+AE Sbjct: 957 VDDFGTGYSSLYHLKHMPLHTLKIDQSFVRDLPHVAGSRTIALTMLAMARNLDLDVIAEG 1016 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q L G + +QG+L P Sbjct: 1017 VETGAQMHFLRDHGCRVVQGFLFSPAVPGD 1046 >UniRef50_C7RB28 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB28_KANKD Length = 861 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 103/568 (18%), Positives = 194/568 (34%), Gaps = 42/568 (7%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + RR A K + + L ++ E Y F + Sbjct: 290 RKQIRRKTADLADKTDQIKQIINLVPH--MIYATNANGELILANRYAADFFGLHLKELDN 347 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC------------ 304 A + L L+ L + Sbjct: 348 INIEQLR--LKAPTASDLFEDEDYLLRKDAVAVEKQLKLNDSNGKATYLTISKVPFVGRY 405 Query: 305 -----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKS 351 ++ + ++ ++ A D LT LPN L + Sbjct: 406 SRLPAVVTVGVDVTETKQFEQQIQHMAQHDSLTGLPNRLLLNDRINQSLALSLRHHHNGA 465 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G M + + + L ++ + + +L G E ++ LS Sbjct: 466 LLFIDLDFFKNINDSLGHMTGDKLLIEVAKRLEDNVRSGDTVARLGGDEFIIQLSELSDV 525 Query: 412 G-----RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + L ++ N L + + + ++ + ++ + Sbjct: 526 EAEAELDAITVAKKLIQTLTQEFQINGQSLHITASIGVLVYPRDADSHELIMQRADTAMY 585 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + A + + ++ L + + A+ + L QP + + + Sbjct: 586 HAKAKGRN-GYAVFKSDMEAVIMRRQTLESDLHRAIYNHEFFLLYQPQIDANTGKLLCVE 644 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNL 579 ++ GI++P +F+P+ + VLE + + + P SVNL Sbjct: 645 ALIRWNHPVEGIISPLEFIPIAEDNGTIVQIGNWVLEKACQQIKLWIKEYGYSPAVSVNL 704 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + L Q ++ I L ++ I + + LE+TE + S+ ++ L K G RI+I Sbjct: 705 SAIQLSQGDLVSTISSLLEQEKIPAELLELEVTETLILHEEKRSIDLLKSLKKLGIRISI 764 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK+L D +KID FV DI + I+++I ++K L V AE V Sbjct: 765 DDFGTGYSSLNHLKKLPLDKLKIDRTFVSDIPGDPDSETIIKTIIKMSKELGLEVTAEGV 824 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ETQ+Q L QGY RP Sbjct: 825 ETQEQLEFLKGERCPQFQGYYFDRPISP 852 >UniRef50_A1K633 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K633_AZOSB Length = 790 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 114/630 (18%), Positives = 210/630 (33%), Gaps = 61/630 (9%) Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV--LIYNMLFYYLTRMIVSPHFAQILWR 201 F + S D + + + + L + I + R Sbjct: 159 AVFQRSMQQASAQRAALDRLGSTSTAMIVLLGAFGLGLVAMLLRQQGSIKALEERDRELR 218 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF--IAGYLVPVFFIIFTLGVGKLR 259 R A +R ++ + C +F + L +F I + Sbjct: 219 RGEAVQRELRERLEKIADNVPGVIYQFRCCPDGHIEFPYASRGLHTMFGITPEVAARDGS 278 Query: 260 YPFLNL------------TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL- 306 + + TL + ++ L Sbjct: 279 AVLAAIHPDDREVVAGAIRRSAETLQPWVCEYRIERAGGGYRWMSVFATPQRERDGATLW 338 Query: 307 -YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRI 357 + A DPLT LPN R L + + + Sbjct: 339 HGHCHDVSSYKAAEDEIRHLAFYDPLTGLPNRRLLMDRLRHALATHARSRHHGALLFIDL 398 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEG 412 DN + ++ G +R + L ++E + + +L G E +++L + Sbjct: 399 DNFKTLNDTQGHQYGDMLLRQVAARLSACVREADTVARLGGDEFVVMLEDLDRDKGAAAR 458 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + + + FD + LL + Q+ Sbjct: 459 QAESAGEKILAALNDAYQLDGREAHSTPSIGITLFDAADAEIAELLKRADLAMYQAKEAG 518 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLK 527 L + ++ L + +R +L QG+ L QP + G + ++ Sbjct: 519 RN-TLRFFDPVMQATVDAHSALESELRRSLRQGNFALLFQPQLDRDGRMTGAEALVRWHH 577 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLL 585 + G+++P F+PL + L VLE+ LA + +VN+ Sbjct: 578 PEQGLVSPAAFIPLAERTGLILPLGRWVLENACDKLAEWAADPETAHLTLAVNVSVREFR 637 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFS-----------NAESSMYNIEQLHKFG 634 ++ R+ +R ++P + E ++ +++L + G Sbjct: 638 HPGFCDQVERVLQRTGVAPGR-----------LKLELTESLLLEDVEDAIERMDRLKRLG 686 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++DDFGTGY++ LKRL D +KID FV+D++T+ DA+I R+I L ++ L V Sbjct: 687 VGFSLDDFGTGYSSLAYLKRLPLDQLKIDRSFVRDVMTDPNDAIIARTIIALGQSLGLDV 746 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +AE VET +Q L + G Q QGYL GRP Sbjct: 747 LAEGVETAEQHDFLLRHGCQSFQGYLFGRP 776 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 615 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 88/584 (15%), Positives = 183/584 (31%), Gaps = 30/584 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL--SWLAALSVLLLLLCT 232 L L R+ A + +E+ +++ Sbjct: 225 GALFPVSLVSTPLRVNDRITGAVTAFHDISDRKKVEERLLLAAKVIETTTEGIMITDAGG 284 Query: 233 -----PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 GY + + A+ + Sbjct: 285 VIESVNPAFCRSTGYSESEAIGNSPRILKSGRHDGEFYRKMWKALLETGQWQGEIWNRRK 344 Query: 285 VETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 Y+ ++ + + + + R QA D LT LPN Sbjct: 345 SGELYAAWLTISAIKDSHGRTTQYAAIFSDITEDKRNQERIKHQAYHDALTDLPNRLLFI 404 Query: 342 QAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 Q + L +D + ++ YG + ++ + L +++++ + Sbjct: 405 DRLTQAIAQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLLLQGVAGRLRRAVRDSDTV 464 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT-GLDMGYGAAWGRFDGNQE 449 +L G E ++L + + + + + + + + E Sbjct: 465 ARLGGDEFTILLPQIGSVEDAAKVAQKILASLRQPWSFEGIPSFCITTSIGIAVCPTDGE 524 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L+ ++ A ++ +++ + +R ALDQG+ +LY Q Sbjct: 525 EAETLMHNADAAMYRAKAQGRNH-YQLYTPELNAWAFERLAMETRLRRALDQGEFVLYYQ 583 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + ++ D G+++P +FL L L LE Sbjct: 584 PKVEAATGNWCAVEALIRWQHPDLGLVSPTEFLRLAEDTGLIVPIGEWCLEEACVRNKAW 643 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R +VNL N+ + + ++ + P + LEI+EE A+ + Sbjct: 644 QDAGLPPVRMAVNLSARQFQHPNLLAAVEKALQKSGLPPAWLELEISEEVILRFADLAPI 703 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L G + +D +G + L++L D +KI V D+ V+++ Sbjct: 704 VLGDLKSLGLSLTMDQYGKRDSRITLLQKLPIDRVKIAASQVIDLSACHDARKSVKALIA 763 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA++ L V A+ V T++Q L G +QG+L P + Sbjct: 764 LARSLDLHVAADGVGTREQCDFLTAAGCDEIQGHLFSDPLSAEE 807 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 13/150 (8%), Positives = 40/150 (26%), Gaps = 16/150 (10%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYL 243 ++ + + +E + ++ +++L L E + + G+ Sbjct: 114 VLRQRVRRLLQAQHTEKALKARETQLSAVASALGEGLIVLDAEGRLTFMNPEAERLLGWS 173 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL---------LNYNQNFLQGVETEYSLAFI 294 +P + R P + L L + + F + + ++ + Sbjct: 174 LPELLGKKIHSIIHNRRPEGDPIAEADCLVLKTIGAGETYRSDEEYFTRKDGALFPVSLV 233 Query: 295 LAVLI--SFSVCLLYMVRIYHRSEWLNRRW 322 L + + + R Sbjct: 234 STPLRVNDRITGAVTAFHDISDRKKVEERL 263 >UniRef50_Q2G9J7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Sphingomonadales RepID=Q2G9J7_NOVAD Length = 769 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 110/739 (14%), Positives = 244/739 (33%), Gaps = 34/739 (4%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT----NL 76 + L+R + H+ L + + GW ++ + + Sbjct: 19 GLQYSSLARLTFARLMAHAVAALLVLQTFGGRVHPALLVGWMALLVSVLISGARFDRSLV 78 Query: 77 WNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI 136 + + + + + + L + + +W L L + Sbjct: 79 DADRRRVSRQEMHRQTISSLFVALAWALPMLVFGPFGDAAGRMTLWTVLAMLMTGMAVTF 138 Query: 137 KCSMY--LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 ++ S ++ F + + V + + + + V+ Sbjct: 139 AAMPMATVLFSGVVGVSAVAAFLFEGEYTAAAVSTVFVVIVSVGAVEVARTFLGARVAEA 198 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFF 248 E+ W + + + + + G + Sbjct: 199 GMAEKSEVVSLLLREFEEGDADWLWQVDANRRIRSVSPRFAFALGADPEDLEGKPLIQVI 258 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY- 307 G +L + + + + + + + Sbjct: 259 AGPAWEDGHFHSSLHDLAERLKRRESFSNLLVRATLHGSHRWWELSASPKVDDNGTFVGF 318 Query: 308 --MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRI 357 + + A D LT LPN L +A + +F + + Sbjct: 319 RGVGSDVTEQRESAEKIAYLARYDTLTGLPNRLMLTEALGDAMGYSEKWRSNCAFLMIDL 378 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G ++ + + + ++++ E +L G E +V+ R+ + Sbjct: 379 DRFKAVNDTLGHLVGDQLLAMVSDRMTRIIKDGEVCGRLGGDEFAVVVRDVADSQRIAEL 438 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + S+ ++ L +G + T++ LL ++ + Sbjct: 439 ADAIIATLSQPYEVDHHMLYVGASVGSAIGPRDGATVETLLRNADLALYRAKDEGGG-SH 497 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGG 531 + E + ++ L ++R AL++ + L QP+ + ++ +L + G Sbjct: 498 CTYEPALHAHAEERRKLEFSLRHALERSEFGLVFQPVVDATSEAVVSFEALLRWNSEEHG 557 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 ++P KF+PL L VL + P + +VN+ LL A Sbjct: 558 SVSPAKFIPLAEDTRLIVPIGEWVLRMACQEAMNWP---PHVKIAVNVSGEQLLDPYFAE 614 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ + P + +E+TE +A + +E L G +A+DDFGTGY++ Sbjct: 615 TVVGALAASGLPPHRLEIEVTESIFVRDATVAQMTLENLMGIGCGVALDDFGTGYSSLGY 674 Query: 652 LKRLQADIIKIDGVFVKDIV-TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L++++ IK+D FV+ N IVR++ +A + +S AE VET+ + + + Sbjct: 675 LRKMRFSTIKVDRSFVQGAAKDNPESLAIVRAVVAMADSLDMSTTAEGVETEAELETIRR 734 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG + +QGY GRP AD Sbjct: 735 LGCKKIQGYYFGRPMSAAD 753 >UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VE11_DESVV Length = 997 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 105/570 (18%), Positives = 204/570 (35%), Gaps = 34/570 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIA 240 L R R E+R + A + +LL + Sbjct: 404 LRRANAQLLLENAERRSVEQALRRAEQRYRGIFENAVEGIFQIAPDGMLLRGNPAMAEMF 463 Query: 241 GYL----VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY + + + + T + + + E L Sbjct: 464 GYSDIESLREVGSMAEAMFAEATSSDVFFHQLEMTGNVSGFEFRARHREDRELWLRVNAR 523 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------- 344 + ++ + S ++ QA DPLT LPN Sbjct: 524 RVADAHDATLFYEGFLTDITISHRSRQQLAHQAYHDPLTGLPNRLLFLDHLQLAMQRAAR 583 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 +A + L +D + ++ G + +R + TL +++ + + + G E ++ Sbjct: 584 RADAMFTVLYLDLDRFKIINDSLGHGIGDALLREVACTLRRCVRDVDTVARFGGDEFAIL 643 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + + ++ ++ + + T + +L Sbjct: 644 LEDTGNCAGAVRIARRIRESLAQPVNIAGHEVFTTASIGIVLQTRDYLTPEDILRDADTA 703 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEG 518 ++ + T + + L +R A+++G+L L PI + E G Sbjct: 704 MYRAKEMGKSR-FKVFNARMREDTLRLMALETDLRFAVERGELSLRYHPIVDLEDGSLHG 762 Query: 519 YDEILARLKYDGGI--MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RF 575 ++ +L G ++P +F+P+ L A V+E + + +A Sbjct: 763 FESLLRWR---RGNEDVSPAEFIPVAEDAGLIADIGAFVIEDVCRQVAAWQDTACDCGIV 819 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 VN+ L++ A + + +R+ I+ + E+TE + ++ + QL + G Sbjct: 820 HVNISGRQLMRPGFAQMVDEILRRHGIAGSCLRFEVTESVLVRHGTLAVSVMHQLRELGI 879 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 R+ +DDFGTGY++ L+RL + +KID FV + + +VR I L L VV Sbjct: 880 RLCLDDFGTGYSSLGYLRRLPVESLKIDRSFVWGMEKDEAGRALVRGILTLGLHLGLEVV 939 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 AE VET++Q LL +G +Y QG+L +P Sbjct: 940 AEGVETEEQAVLLRDMGCRYGQGFLYAKPL 969 Score = 44.6 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 20/214 (9%), Positives = 54/214 (25%), Gaps = 18/214 (8%) Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFG---DADAIFTVVDLLSLFTAVLIYNMLFY 184 L LV + + PL T + A V++ S + ++ + Sbjct: 174 LALVFFCVAAFASWFFLQSISRPLAALTDYARKVAAHEFPAPVEVKSRDEIGTLARVMGF 233 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAG 241 + + +R + +L++ L F + Sbjct: 234 MAADLARFVGGLEAEVKRSTGELRTALGELSAIVGGMGEGLLVVSAEGLVLRSNEAFASL 293 Query: 242 Y---------LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYS 290 + + + LR + +++ + F+ G Sbjct: 294 FCLEPFGCPVALDALLPLSGQDDSGLRGVLEDALQSMARGEAARHSGEYPFICGDGVRRW 353 Query: 291 LAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + I C++ +V+ + Sbjct: 354 VGCTIEPVTIGGKPCIVCLVQDVTARNEAQQALR 387 >UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Q7_DECAR Length = 930 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 109/599 (18%), Positives = 198/599 (33%), Gaps = 27/599 (4%) Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS-PHFAQILWRRDIAPSLGK 210 + +L VL+ ML L R I A+ A Sbjct: 314 ASLGVSAEQVEKRAWKELSISGLLVLLAFMLAGILIRQIQRGRRVAEHQLNLAEAVFANS 373 Query: 211 EKRAF--TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 + L + Y I G F + Sbjct: 374 VESILVTDADQRIVEVNPAFLRISGYSRSEIIGQ-----HPRILKSGRHDAAFFARMWQE 428 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQ 325 ++ + Y +AV+ V M+ + + + Sbjct: 429 LNANDTWEGEVWNRRKNGEIYPALLSIAVVRSQDGKVVNYTGMIFDLSQQKTVEALLDQL 488 Query: 326 ALTDPLTLLPNF----RALEQAP----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 D LT LPN ALEQ + S L +D + ++ G + + Sbjct: 489 RTFDGLTALPNRESWLSALEQQLANAKRNSSRFSILQLDLDRFKAINDSMGYSVGDQVLI 548 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 + +++ + + +L G+ ++L+ + + L +R Sbjct: 549 EAAERVKVSLRKYDIVARLGGNRFSILLNEIVDPQTIGGICEKLLTAFARPFQMGGINAH 608 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + F + + L+ + A L ++ T L Sbjct: 609 ISASIGVAIFPNDGLDSKTLMMAAESALYSAKADGRNL-YKYYSHEMNEMGTHLFKLERM 667 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R ALD+ + + QP N E G + +L + G ++ +F+P+ + L Sbjct: 668 LRVALDRNEFSVVYQPQVNAKNGELVGVEALLRWHNPELGNVSAVQFIPVAEETGLIVSI 727 Query: 552 DLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 V+ + T + +VNL + ++ + + + + + LE Sbjct: 728 GEWVMRAACHQARTWQTELGFEIPVAVNLSARQFRRNDLLASVQTILDETGLPNRLLELE 787 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE + ++ + L+ G + A+DDFGTGY++ LK + +KID FV+D+ Sbjct: 788 ITEGSLIVDPIGAIDIMRGLNCLGIKTALDDFGTGYSSLAYLKAFPLNRLKIDRAFVRDL 847 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 N D I +I L ++ V+AE VET+ Q+ L G Q QGYL G+P D Sbjct: 848 PDNESDCAISNTIIALGLNLNMEVLAEGVETEAQRDFLAAAGCQVFQGYLFGKPMSGED 906 >UniRef50_Q2I6K9 Multidomain signal-transduction protein n=1 Tax=uncultured delta proteobacterium DeepAnt-32C6 RepID=Q2I6K9_9DELT Length = 955 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 102/621 (16%), Positives = 206/621 (33%), Gaps = 35/621 (5%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 + G L + DA+ +L L F L Sbjct: 304 LIAGGRPTGRLDLWVKAECRDAVTLSAELTPWIALALENARSFTALEAHRTLLQDKVHAL 363 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVL-------LLLLCTPYENDFIAGYLVPVFFIIFTL 253 + ++R + + ++ T ++ + L V I Sbjct: 364 EQAEEALRQSKERYELAVRGSNDGIWDWSLDSGVVHYSTRWKQ-MLGCELTDVKETIPEW 422 Query: 254 GVGKLRYPFLNLTWAV-----STLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 + + + L + + + Sbjct: 423 FDRIHPDDLVRVKRLLNKHLSGELPHFEAEHRMRHRDGKYSWMLTRGEAVRHPDGTPYRI 482 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLR 356 + + A D L L N + E+ + + Sbjct: 483 AGSQSDITARKIAEDQLRHDAYHDVLCGLANRALFMERLERAIKRLNRRDDYLYAVLFVD 542 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + + + L ++E + L +L G E ++L + Q Sbjct: 543 LDRFKNINDGLGHLAGDSLLIELSTRLSGYVRETDTLARLGGDEFAVLLEDICSPLDAQR 602 Query: 417 MVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + + + +L + Sbjct: 603 AAQRFQEALTTPFQLKGQEVFVTASIGIALGNRSYSGAEEVLRDADTALFYAKDGGRAR- 661 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDG 530 ++ + + + ++ L N +R ++D+GD L PI + E G++ ++ + +D Sbjct: 662 HETFQRGMHLRAQARLQLENDLRRSVDRGDFHLVFHPIVDVESCEIAGFEALVRWMHHDR 721 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQK 587 G ++P+ F+ + + L V+E + +A P S+N+ P L + Sbjct: 722 GQVSPEDFIGVCEETGLIIPLGKLVIEGACEAIAEWRQRHPELSPPTISINVSPRQLSAE 781 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + +R+ ++PQ + LEITE + +SS+ ++ L G + IDDFGTGY+ Sbjct: 782 GLVDDVRHALERWKLAPQLLTLEITESALLDDIDSSIQVLKDLKDLGVGLQIDDFGTGYS 841 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L +L D +KID F++D+ ++T IV +I LA + L V AE VE Q Sbjct: 842 SLSYLSQLPIDALKIDRSFLRDMTSDTNQFNIVSAIITLAHSLDLEVTAEGVEHVAQLDE 901 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L +L + QGY P Sbjct: 902 LRRLRCNHAQGYYFTTPISSD 922 >UniRef50_C4ZNG3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNG3_THASP Length = 905 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 113/689 (16%), Positives = 215/689 (31%), Gaps = 51/689 (7%) Query: 86 TAVMLGSQTFVVLCACAILRWQLGTRW--RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 +A +G A W R L S + R V L Sbjct: 214 SAAWIGLLNTAGDGIRAAAHHGSHLPWVERLALLSPHATARTPVEIAVARGTTYLQNSLQ 273 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLL-SLFTAVLIYNM---------LFYYLTRMIVSP 193 P+ A + + + + + +T M Sbjct: 274 DDPALAPIHDELEAAGLRAAIAIPLVQDGRMSGCFVLYAGERGFFDEEMTGLITEMAEDV 333 Query: 194 HFAQILWRRDIAPSLGKEKRAFT--LSWLAALSVLLL--------LLCTPYENDFIAGYL 243 FA + R+ +E +A +++ L+ + I GY Sbjct: 334 AFALANFEREARRQRAEEAARLLGRAVEASANGIMITDARQPGNPLIHVNKAFERITGYS 393 Query: 244 VPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI- 299 F +G L+ + AV + + + LA + Sbjct: 394 AAEALGRNPGFLVGADPLQRGLAEVRAAVKAQREAEVVLRSHRKDGSPFWNELSLAPVRD 453 Query: 300 --SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRI 357 + ++ Q DP+T L N L Q + R Sbjct: 454 SAGTVTHFVGVINDISERIAYEEALERQNNEDPVTGLANRNLLRDRVGQAIAFA----RQ 509 Query: 358 D------------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 D N + ++ G ++ I + + + + ++ G E +++L Sbjct: 510 DGRALVLLLLDLDNFKRINDSLGHDAGDQALKEIAGRIRDCVDACDTVARIGGDEFVVLL 569 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + + + + + + F + + + LL Sbjct: 570 TDLAGAQAASLVAGRILRAIGQPLIVLGREIKISASIGASVFPDDDDGFEALLRNADAAM 629 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGY 519 ++ A ++ + +++ + +R A+ Q +L+ QP+ Sbjct: 630 YRAKDAGRN-AFHFYTADMNAEAVRKLEMEGRLRQAIAQDGFVLHYQPVHEAAGARMVAA 688 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + ++ +G I P +F+PL + + VL + + + + +VNL Sbjct: 689 EALVRMRDENGTITPPGEFIPLAEETGMILALGRWVLLAACREARRWLDLGREMQVAVNL 748 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + +A I + + + LEITE + + + L +++ Sbjct: 749 SARQFNDEGLAAHIRHCLAAAGLPARLLKLEITESMVMRDVGQAARVLSTLKALDVSVSV 808 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTG+++ L+R D +KID FV+D + A IVR I LA + L VAE V Sbjct: 809 DDFGTGHSSLACLRRFPLDQLKIDRSFVQDAAQDEDSAAIVRGIIALAGSLRLQTVAEGV 868 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET +Q L G LQGY RP Sbjct: 869 ETAEQVGFLRSAGCDLLQGYYFSRPLEAD 897 >UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BL35_9GAMM Length = 970 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 98/554 (17%), Positives = 195/554 (35%), Gaps = 29/554 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 + + G +A ++ A +++ + I GY Sbjct: 286 EKKAAEGSLLQAASVFEHANEGIMITDPEGTIQNANLAFSRITGYSRNEVIGQNPRIFSS 345 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRI 311 F + ++S + ++ ++ + + + + Sbjct: 346 GHHDDQYFAEMWKSLSEKGNWTNEIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLFSD 405 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + ++ A D LT LPN L + + +D + + Sbjct: 406 ITALKKQQQQLEKIAHYDALTGLPNRVLLSDRLQQAILQAKRHKRLLAVAFFDLDGFKEV 465 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + +G + + + ++E + L +L G E ++VL + ++ L Sbjct: 466 NDTHGHSIGDKLLIELAERSKQALREGDSLARLGGDEFVVVLQDLHSSEESLPVLERLLK 525 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S+ I N+T + + + ++ L+ Q + + Sbjct: 526 AISKPIFMNHTEICVSASIGITFYPQADEIDADQLIRQADQAMYVAKQSGKNR-YHIFDT 584 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 + I +AL+ + LY QP N + G + ++ + G++ P Sbjct: 585 EHDRSVRGHHDQVLRIHSALNNREFELYYQPKVNMRTGQVVGAEALIRWNHPENGLVMPG 644 Query: 537 KFLP-LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 FLP + L VLE + + SVN+ L L + R+ + Sbjct: 645 DFLPVIAGDAGLVVEVGDWVLEQAMTQIDQWHQQGLDVPVSVNVDALHLQLPDFVDRLQQ 704 Query: 596 LFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + P + LE+ E A ++ I + G A+DDFGTGY++ LK+ Sbjct: 705 MLAAHPGVLPGDLELEVLETSALNDINRVSTIINECRDIGISFALDDFGTGYSSLTYLKQ 764 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L A ++KID FV D++ + D I+ + LA A +AE VE+ Q +L +G + Sbjct: 765 LPAHLLKIDRSFVCDMLDDLEDLSILEGVLGLANAFRCQTIAEGVESVAQGEMLLMMGCE 824 Query: 715 YLQGYLIGRPQPLA 728 QGY+I +P Sbjct: 825 LAQGYVIAKPMQAH 838 Score = 42.3 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 12/166 (7%), Positives = 28/166 (16%), Gaps = 13/166 (7%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 L+ + + ++ L I + +W + L Sbjct: 135 LWGGITLQAIIILGLVFSIHRGLKLRDELSSQRQSLRNIIWGTDVGTWEWNVRTGEAHLN 194 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL-------NYNQNFLQG 284 T + GY + I +P + Sbjct: 195 TRWAATL--GYTLDELQPISIETWWMYVHPDDVERSREALHKHFSGESDAYQCEVRMRHK 252 Query: 285 VETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + V+ + + A Sbjct: 253 EGHWVWVLDRGKVVAWSESGKPEWVSGTHTEITEKKAAEGSLLQAA 298 >UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VBK7_DESVV Length = 1413 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 122/604 (20%), Positives = 216/604 (35%), Gaps = 36/604 (5%) Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 L+IS I + + + F+ V ++ + Sbjct: 804 ISAILLQISNAVNVTHDIEGLFSTIHDILRSYVAAENFFIAL---VDEKLDRLEFPYHTD 860 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 R ++S LA+ L ++ T + L+ +I V L P Sbjct: 861 EKDPSLPRLESISSLASPPPTLEVIRTGRQLLLSYEDLLGRAYIGTIASV-WLGTPLRVR 919 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + L +Y+ + + + + + Sbjct: 920 GKVIGAMVLQHYSDPDAFSDSDARLMTSLADQIAVAI-----------ERKQNEEQLTYL 968 Query: 326 ALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 AL D LT LPN L + EQ + + +D + ++ +G + + Sbjct: 969 ALHDSLTGLPNRTLLLERIEQARLRSLRGKGRSFAVMMIDLDRFKIINDSHGHAVGDRLL 1028 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 + + + P+++ + + +L G E ++L T + H+ + R N L Sbjct: 1029 QMVSAAVRPVLRPADTVARLGGDEFAILLEDVATPREVVHVARRVIKAVERPARVANKLL 1088 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + LL Q+ + Q + L N Sbjct: 1089 RTSASVGIVLRTDGYGSADELLRDADIAMYQAKEQGRGR-FRVFNRTMHQQAMDAMNLEN 1147 Query: 494 TIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 + AL G L QP+ + G++ ++ G++ P F+P+ + + R Sbjct: 1148 DLGAALRWGQFELDYQPVFDTRSRALLGFEALVRWRHPLRGLIPPTAFIPVAEETGIITR 1207 Query: 551 FDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 VLE+ L LA +VN+ L Q + G + ++ + + Sbjct: 1208 LGHWVLETALTALARWRLQIPGIDDLYVAVNMSALQFAQPTLPGSVRDALQKTGLPASCL 1267 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 +EITE + +++ I L G I IDDFGTGY++ L+R D +K+D FV Sbjct: 1268 KVEITETAIMQDPTTALQRISALRDLGVGIGIDDFGTGYSSLAYLQRFPVDTLKVDRSFV 1327 Query: 668 KD--IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + IVR++ LA + SL+VVAE VET++Q A L LG +QGYL+ RP Sbjct: 1328 SQSTTPEGEGNREIVRAVVVLAHSLSLAVVAEGVETEEQFAFLAGLGCDAVQGYLLSRPV 1387 Query: 726 PLAD 729 P AD Sbjct: 1388 PEAD 1391 >UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAA4_KANKD Length = 1128 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 98/495 (19%), Positives = 191/495 (38%), Gaps = 20/495 (4%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 I F + ++ + + Y+ ++ + + Sbjct: 616 PIEFSAEQDPDKTFKMIWRQLARGDAWRGELVSRRKDGSHYTEFAMIYPVRNNKGKIINY 675 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + + + H + D LT L LE+ +Q + + L + Sbjct: 676 VAHKEDITLKKIAEEKIHQLSNYDQLTGLLKREMLEERLQQLLDDSFKQKQAMTVMWLDL 735 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 DN + ++ G + + + L + + + ++ G VL E + Sbjct: 736 DNFKTINDSLGHQVGDLILIEVANRLRFELGKQSIISRIAGDTFAAVLP-LTNEHSAALI 794 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + RQI +N+ L + + ++ L+ ++ Sbjct: 795 AKNVLEVVQRQIKFNSHILSISPSIGLAISPNDGQSADKLIMCAETAMYRAKHDGRN-TF 853 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + + + + + L ++ AL L QP + G + +L + G Sbjct: 854 RFFAQEMQEHSLRSLQLSIALKEALTNDQFHLVYQPQMSLSNNSMVGAEALLRWEHPEWG 913 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIA 590 ++P +F+PL Q L + V++ + + + +VNL L Q ++ Sbjct: 914 TVSPAEFIPLAEQSGLIVQIGEWVIQQVAQQQKSWLERGLPEVIIAVNLSALQFHQPDLV 973 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I L ++ + P+ + +E+TE A + E + I+ L + GF+++IDDFGTGY++ Sbjct: 974 ETITSLVRKAGVVPENIEVELTEAVALKDPEVAGTTIDALSRAGFKVSIDDFGTGYSSMS 1033 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ +KID F+KDIVT+ D IV +I +A + + +AE VETQ+Q L K Sbjct: 1034 YLKKFAVHKLKIDQSFIKDIVTDIDDQAIVTAIIQMAHSLHKTTIAEGVETQEQLDFLRK 1093 Query: 711 LGVQYLQGYLIGRPQ 725 G + +QGY RP Sbjct: 1094 KGCEEMQGYWYSRPL 1108 Score = 42.3 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 29/302 (9%), Positives = 71/302 (23%), Gaps = 14/302 (4%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCV--MLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFL 84 ++ +++ I + + +A + L L+ L + W + + G+F F S Sbjct: 115 INFWLAARFTIAFAILLVATITLNFERKLAKLSRYFWLALTLMTVGLFHFWFLYFPDSVP 174 Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVG 144 T + T + + +L + + LV Sbjct: 175 DTYSNVEGLTQFKVISEYLLIGLYLVAAFLFINQLNNIREFGANWLVAAAITMAMSEFFF 234 Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 + + + G IF L I + F ++++ + Sbjct: 235 TLYANVSDLYNLIGHIYKIFAFSFLYRALFVEAIQSP-FMKMSQLQSKLSATLNALPDLL 293 Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN 264 K S L + I + G++ Sbjct: 294 IEVDAKGNYLDIHSANPELLLRREEKLIGSNIKEIMDKENAKRCMQAIETAGQIGRSQGT 353 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + + + L + R + + + Sbjct: 354 RIELQVPSGVRTFELSISRKKGHL-----------DQPSTFLILSRDITSTINIEQHIAH 402 Query: 325 QA 326 +A Sbjct: 403 EA 404 >UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q6I3_CATAD Length = 750 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 99/576 (17%), Positives = 199/576 (34%), Gaps = 31/576 (5%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIA 240 + ++R I + + R A L + + L T + Sbjct: 168 FGISRDITARTTTEAQLRAKTAELDRIGTELRALIESSPDPMCRFDRQLRYTYANPAALR 227 Query: 241 GYLVPVFFIIFTL-----GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 VP ++ K + V + + ++ L T L Sbjct: 228 VAGVPESELVGRTNREAGHQEKFVREWEQTLRRVLRTGVGDEVEHDLVLAGTRRFFHTRL 287 Query: 296 AVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------ 346 + ++ ++ + + QA+ DPLT L N L +Q Sbjct: 288 VPERDATGTVVSVLTVSHDLTDRKRIEDALAEQAVRDPLTHLANRALLVDRIDQALAKMR 347 Query: 347 --EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN-EKLYQLPGSELLL 403 + L +D + ++ G + + L +++ + + + G E ++ Sbjct: 348 VQGGRLAVLFLDLDRFKVVNDSLGHAAGDALLVATAARLRSAVRQGSDLVARFGGDEFVI 407 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + + + + S + + + T LL Sbjct: 408 LCEHVQGRKDAADVARRVTRALSAPFERDGQPIHISASIGIAVTSDPMTTADELLRDADA 467 Query: 461 LAEQSCAHHHVL-ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---G 516 + A +H + ++ V + ++ L +R A+++ + L +P+ N Sbjct: 468 AMFRVKARNHGSGSYIFFDDSVREEAVSRLWLEGELRRAIEEKEFRLVYEPVYNLRDRQI 527 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK----KG 572 G + ++ + G++ P F+ + +L VL LA + Sbjct: 528 IGMEALIRWQHPERGLLPPSTFIEIAEDCDLIVPIGRWVLHEACGQLAVWNRRRDPGKPP 587 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VNL P L + + + + + P+ + LE+TE + + + Q+ Sbjct: 588 LTMAVNLSPRQLNDEGLVAEVANALRGSGLEPEQLTLEVTETAVHEAPQFAQAVLSQVSD 647 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +IA+DDFGTGY++ L+R+ A+ +KID FV + D IV ++ +A A + Sbjct: 648 LGVQIALDDFGTGYSSLGHLRRIPANALKIDRAFVNGLEHKGGDTAIVTAVVTMAHALGM 707 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V E +E++ Q L LG QGYL P A Sbjct: 708 ITVGEGIESEAQYEYLRALGCDQGQGYLFAEPVSAA 743 >UniRef50_B9ZLS8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLS8_9GAMM Length = 1301 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 112/576 (19%), Positives = 207/576 (35%), Gaps = 37/576 (6%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFI 239 ++ R++ + A + RR + R + +L+ L I Sbjct: 717 HMARIVAANLGAALERRRALTGLR----RLAAVFQSTRDGILITDLSARIVAVNPAFTEI 772 Query: 240 AGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 +G+ F + + + + + L Sbjct: 773 SGFSEHDALGRNPRFLKSGRHDAEFYREMWATLGATGHWQGEVWNRRYTGETHPQWLSLD 832 Query: 297 VLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPE 345 V+ ++ + A D LT LPN RALE+A Sbjct: 833 VVRDEGGEPQYYAGVLTDLSALKRSQNELEYLAQHDSLTDLPNRSQLQTLLGRALERARA 892 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + G + CL +D + ++ G + + + R L +++ + L +L G E L VL Sbjct: 893 ERRGLAVLCLDLDRFKTLNDSLGHSVGDRVLLEVARRLADVLESPDLLGRLGGDEFLAVL 952 Query: 406 SGPETEGRLQHMVNILN---SRQIHWN-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 +T + L R + + + RF + +T+ L+ Sbjct: 953 ESADTHELAEERARALLEVLQRPFVLDDGQVVYVNASIGVSRFPADGDTVVDLIQHADAA 1012 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL--DQGDLLLYAQPIR---NKEG 516 + A E ++ +++ L N +R AL + +L ++ QP + Sbjct: 1013 MYHAKALGR-ETWSFYTEDLTQAAAERLDLENRLRHALNQENDELAVHFQPQVRLVDGRF 1071 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRF 575 G + ++ G + PD+F+P+ + L VL + Sbjct: 1072 TGVEALVRWRTGSGESIRPDRFIPIAEETGLVVPLGEWVLREACRQGRELLDQVSPDLVM 1131 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 SVNL P+ L + N+ ++ + + + EITE + ++ ++ L G Sbjct: 1132 SVNLSPVQLRRGNLVEQVRAILGETGFPARQLEFEITETGLMQQGDQAVTRLKALKSLGV 1191 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD---IVTNTLDAMIVRSITDLAKAKSL 692 R+AIDDFGTGY++ L+ D++KID FV + D +I +I +A+ L Sbjct: 1192 RVAIDDFGTGYSSLAVLQTFPLDVLKIDRSFVDGVDRMDEEGTDRLIASTIIAMARNLQL 1251 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VE + Q L + G ++ QGYL P Sbjct: 1252 EVIAEGVENEAQARFLIEHGCEFGQGYLYSPALPPE 1287 >UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZMU9_PSEU2 Length = 972 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 93/432 (21%), Positives = 178/432 (41%), Gaps = 17/432 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSR 365 ++ A D LT LPN L + S + +D + ++ Sbjct: 521 ERYDAKKKLTYLAENDSLTHLPNRWFLSNYLREIISRKTSAPDAVSVIFIDLDRFKAVND 580 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGRLQHMVNIL--- 421 G + + R L + EN + +L G E +V++ +E ++ + + Sbjct: 581 TMGHSVGDQLLIQAGRRLKDCIGENSVVARLGGDEFSIVVTHSVYSESLIKSLATHVVEA 640 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + + + + +L Q+ + Sbjct: 641 LGKPFNLGGQDIFVSASVGIANYPFDGRDTGVILKNADTAMYQAKKSGRN-NFKFYNARM 699 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 + T+++ +R AL++ + +L+ QP + G + +L + G+++P F Sbjct: 700 NESLTRRLQTETLLRGALERDEFILHFQPKVSLTDGRISGLEALLRWNHPEQGMVSPADF 759 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLF 597 +P++ L + V+ + + L + ++NL L K +A + + Sbjct: 760 IPILEDTGLIIPVGVWVIRKVCETLKRWEENHIRLVPIAINLSVRQLQVKGLAETVKHIV 819 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + Y I+P + E+TE + ES++ + + +G +++DDFGTGY++ LKR Sbjct: 820 EAYGINPALLEFELTESMLMIDPESAVEILRDIKSYGISLSVDDFGTGYSSLAYLKRFPL 879 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID F+KDI +N DA I R++ LA L+V+AE VET Q LL G +Q Sbjct: 880 DALKIDRAFIKDITSNHEDAAITRAVIVLAHELGLNVIAEGVETVDQLELLVTYGCDQMQ 939 Query: 718 GYLIGRPQPLAD 729 GYL +P + Sbjct: 940 GYLFSKPVISDE 951 Score = 42.3 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 19/222 (8%), Positives = 48/222 (21%), Gaps = 16/222 (7%) Query: 112 WRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS 171 R + + L+ L + + + + F +K S + Sbjct: 141 MRLSFNAERIAAELYSLVIQATLFAGFFLLISLMLMGFMIKRSLAHLGKLHSYEAEIASG 200 Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 A + + + + L E TL + ++C Sbjct: 201 AVAAEAMLVADAPMEIQEAIKAVN-RTAASMRNHFGLRIESLMNTLVQHKNALDEVSIVC 259 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC-----------LLNYNQN 280 + I Y+ F +L ++ W + + N Sbjct: 260 EVSASGRIT-YVNERFVTSSQHSRAELLELTIDEVWTGMSSANEPWLWAPENKVWNGEVR 318 Query: 281 FLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLN 319 E + ++ + + + Sbjct: 319 LSGRTGKEAWHQRTVIPILDDLGGVEKYICIDIDITDRKEFE 360 >UniRef50_C7QU84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=C7QU84_CYAP0 Length = 726 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 117/614 (19%), Positives = 216/614 (35%), Gaps = 31/614 (5%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + L A T + + M + R Sbjct: 93 IPFILVTGSLGEEAAVECMKAGVTDYIVKDRLFQLPTILMRSLEEFALRREQQRVMEERR 152 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY------LVPVFFII 250 + EKR L A+ +L++ L + + GY F +I Sbjct: 153 QAEIALRASEKRFRALIENASDIILIVAPDSQLTYASPSVERVLGYDASSLTGQRFFDLI 212 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS-FSVCLLYMV 309 G++ F + + LL + Q A + + Sbjct: 213 HPDEQGEIIGFFDKIKETSNLSQLLPDFRVRTQKDTWVILEAIAKNLQEDPAVGGFVVNC 272 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNL 360 + A D LT L N AL + +E + L +D Sbjct: 273 HDITERHQTAEQLRYDASHDKLTGLANRSALLKQLKRAIEQKKRRKEDHFALLFLDLDRF 332 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G +M ++ + + L +E + L + G E + L + + + Sbjct: 333 KVINDGLGHLMGDQLLKEMAKRLQRCHREGDLLARFGGDEFVFFLKEIRQQEQAIVVAER 392 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + N+ + + + ++ + +L + A Sbjct: 393 IHQALREPFILNHQEVFISASIGITLSADHYDSPEQMLRDADTAMYWAKARGQG-GHTIF 451 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMT 534 + KQ+ L + +R A+ + +L++Y QPI + + G + ++ + ++ Sbjct: 452 APTMHLSALKQLHLESDLRQAIQRQELVVYYQPIFSLDTQKIVGAEALVRWQPPEKPLIP 511 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAG 591 P+ F+PL + L D VL+S + L + K SVNL P Q N+ Sbjct: 512 PNDFIPLAEETGLILEIDHWVLKSACQQLYQWQQEFKTLAPQFISVNLSPKQFSQPNLTE 571 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 +I + K ++ Q + +EITE N+ S + + QL + +I +DDFGTGY++ Sbjct: 572 KIAQTIKETGLAEQCLKIEITETVFLENSTSVLEILCQLQQLNIQICLDDFGTGYSSLSY 631 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L + + +K+D FV + + IVR + LA L ++AE +E +Q LLH L Sbjct: 632 LHQFPLNSLKLDRTFVSRLGKTNKNDTIVRIVATLANELDLELIAEGIEEIEQIQLLHYL 691 Query: 712 GVQYLQGYLIGRPQ 725 G Q+ QGY P Sbjct: 692 GYQWGQGYCFSPPV 705 >UniRef50_C6MGV8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGV8_9PROT Length = 813 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 110/549 (20%), Positives = 201/549 (36%), Gaps = 28/549 (5%) Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVG 256 + + +A T+ + +++L + C + Y + F Sbjct: 248 RLAKDRLAQAATVFECSTEGIIILNKNKLVDCANNAFYSMTQYQERNLKNKELPFLTHRS 307 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + +L +V T + + + + ++ + + M+ Sbjct: 308 LNGNIYEDLWHSVETHGCWRGEIKAFKRNKEIMYIWLTIGLIPVETGMEKQFVVMISDIT 367 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + A D LT LPN + + + +DN + ++ Sbjct: 368 KIRETQEQLAHFAYYDSLTNLPNRILIMDRLNQAIAKAARDSSLLGILFIDLDNFKRIND 427 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + I + +L ++++++ L +L G E + V E+ L + + Sbjct: 428 TLGHKHGDSMLCLISQRILSVLRQSDTLGRLSGDEYIAVAGNVESYDALIRIAGKILDCI 487 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S+ + +N + + + E L+ ++ + ++ Sbjct: 488 SKPVVLSNMEIIPSCSIGISVYPHHSENPDHLVQMADTAMYEAKKNGRN-NYAFYHPGLT 546 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFL 539 + + + AL + LLY QP NKE G + ++ G++ P + + Sbjct: 547 QRAAHHLTRERELHHALINDEFLLYFQPQFSLINKEIIGVEALIRWKHPKRGLLLPAEII 606 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ L VL+ K L D R SVN+ L N+ I +L Sbjct: 607 PVAETSRLIIDIGNWVLKEACKQLHQWRTDGLDNLRMSVNVSIRQLADNNLQKFIAKLLH 666 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 +Y + ++ LEITE N + +EQL K G I+IDDFGTGY+ LK L Sbjct: 667 QYSLPAHSLELEITESCL-QNELIYISCLEQLKKLGILISIDDFGTGYSCLSSLKNLPIH 725 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FVK I + D I ++ LA+ +L V AE +ET Q L G LQG Sbjct: 726 RLKIDQSFVKGIPLDKNDCAIATAVLALAQKLNLQVTAEGIETYDQITFLLGHGCNELQG 785 Query: 719 YLIGRPQPL 727 Y + +P Sbjct: 786 YWLSKPVSP 794 >UniRef50_C0GP21 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GP21_9DELT Length = 721 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 94/559 (16%), Positives = 207/559 (37%), Gaps = 31/559 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL----LLLCTPYENDFIAGYLVPVFFI 249 + L + EK+ TL + ++LL L T +F + Sbjct: 142 QELEELVEKRTRQLQESEKKYRTLFETSKSAMLLVDTESGLLTMANKEFCDLIGYTRQEV 201 Query: 250 IFTLGVGKLRYPFL--------NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 +L +P + + + + L E + L + +A + + Sbjct: 202 ENSLHFLNFVHPDDHERARKYFDTSRQDAGTAPAEFEIKGLTREEKKLHLYYKVAAIPEW 261 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSF 352 + ++ + + + + LT LPN + +Q + Sbjct: 262 NSLVISIF-DLTDKRRVEEELRQRTFYNSLTGLPNSELFKNRLKKSIQTRQEDQGYFFAV 320 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D + ++ G I + + L +++ + + G + L++ + Sbjct: 321 IFIDLDRFKLVNDSLGHQKGDELISLMAKRLERGVKKRDTVAHFGGDDFGLLIEAEDLPE 380 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + + + + ++ + Sbjct: 381 AALR-AEKIKDQFVEPFEIAGNEIYTTCSMGIVVSSQDYSEPEEIFRDADTALHRAKSTG 439 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 + + Q + + L +R A+ Q + +LY QPI + G++ ++ + Sbjct: 440 PG-NYVVFDPQMHAQVSDLLQLETELRKAIQQKEFVLYYQPIYNLADLRITGFEALIRWI 498 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + G++ P+ F+P+ + L +L++ + + ++NL + Sbjct: 499 HPEKGMVPPNVFIPIAEETELINPLGEWILDTACRQARKWNKGGRELTMNINLSGVQFKD 558 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 KN+ + F++ ISP + LE+TE +AE S+ + ++ K G R++IDDFGTGY Sbjct: 559 KNLINVLENTFRKNSISPLHINLELTESVVMGDAEESINTLNKIKKLGARLSIDDFGTGY 618 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L++ D +KID F+ + T +VR+I + ++ + VAE +ET +Q Sbjct: 619 SSLNYLQKFPIDNLKIDRSFINTMET-QSGQELVRAILAMTQSLGIKAVAEGIETWEQVK 677 Query: 707 LLHKLGVQYLQGYLIGRPQ 725 LL +L QGY +P Sbjct: 678 LLQELNCNLGQGYHFSKPL 696 >UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Photobacterium profundum RepID=Q1YXX2_PHOPR Length = 725 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 105/429 (24%), Positives = 187/429 (43%), Gaps = 16/429 (3%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHY 367 + A D LT L N R L + EQ + C +D+ + ++ Sbjct: 289 KQKTHELEKFAFYDYLTGLANRRLLNEHLEQVIQQTECCGNSAALLCFDLDDFKRINDSQ 348 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 G + ++ I L ++ +N+ + +L G E ++LS + + L S Sbjct: 349 GHDIGDCVLQQISHRLNSVVNKNDIVARLGGDEFTVLLSASYSASDAGRIAGQLIEVISE 408 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 I NN L + + + LL + + + + Sbjct: 409 PIFLNNKELSVSASVGITMIPSDGNDVSTLLRNADMAMYSAKKSGK-RNYHFFNKALQKK 467 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 +V + ++ TA+ + +L+ QP+ N + Y+ ++ G++ P++F+ + Sbjct: 468 ALDKVSIEESLDTAISKKQFVLHYQPVFNFYSNKLCCYEALIRWNHPREGLLYPERFIGI 527 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + V++ + + H K R +VNL P ++ I R+ + Sbjct: 528 AEESGKIKNIGYWVIQEVCNVIKMHQLHIGKRHRIAVNLSPRQFNDPDLLENIRRIIRNV 587 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 I + + +EITE N ES++Y + Q + G +AIDDFGTGY++ LKRL D + Sbjct: 588 GIDARFLEIEITESTLMENVESAIYTLRQFKELGITVAIDDFGTGYSSLAMLKRLPVDKL 647 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FVKD+ +N D IV+++ +A +SV+AE +ETQ+Q LL + G + QGYL Sbjct: 648 KIDRSFVKDLDSNNSDQKIVQALISMAHTLQISVIAEGIETQEQFNLLQQYGCDFGQGYL 707 Query: 721 IGRPQPLAD 729 RP P+ + Sbjct: 708 FSRPVPITE 716 >UniRef50_B8G486 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Chloroflexus RepID=B8G486_CHLAD Length = 699 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 120/626 (19%), Positives = 225/626 (35%), Gaps = 40/626 (6%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 L + D PL + G D V L + ++ I+ + Sbjct: 64 LLTHANDDLPLPVVLMTGYGDEQVAVAALKAGALDYIVKTPDSLRDLPRIIERALRERRL 123 Query: 201 R----RDIAPSLGKEKRAFTLSWLAALSVLLLLL-------------CTPYENDFIAGYL 243 + E+ + ++ ++ ++ Y D + Sbjct: 124 LVERRQAEQALRQSERLFRAMIERSSDAISIVDRAGRVRYASPSTRHLIGYAVDGMLAVP 183 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF-- 301 + F +I ++R F L + + + + + Sbjct: 184 INGFAVIHPTDRERVRQLFNKLIQHSG--SSVTADFRVRHAKGGWRWIEATASNWLDDPA 241 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQ-EAGKSF 352 ++ R + + R L D LT LPN +A++++ + Sbjct: 242 VQGVIVNYRDITERKLMELRLQHGMLHDSLTGLPNRLLLNDRLLQAIKRSHRNLHYQFAL 301 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D+ +F++ +G + + +I L ++ + +L G E +++L + Sbjct: 302 LFLDLDHFKFINDSFGHPLGDRLLVAIASRLSSCLRTVDTCARLGGDEFVILLDDIASPT 361 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 +V + + + N +L Q+ Sbjct: 362 DAIRIVERILRQVSLPFEIDGRLFHTSVSIGIVFGANNYTDPSQMLRDADIAMYQAKMAG 421 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 E + ++ L + +R A+ + +Y QPI + G++ ++ Sbjct: 422 KGR-YRIFEPAMREAAQIRLDLEHELRRAVANHEFCVYYQPIIHLPSGRLVGFEALVRWR 480 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLT 583 GI+ P FL + + L+ QVLE + + L SVNL Sbjct: 481 HPTRGILLPAAFLHVAEEAGLNDSIGWQVLEQVCQQLVVWRRLNPRAAALSVSVNLSARQ 540 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 ++Q N+ R+++L +Y + P A+ LE+TE + + +L + G +IAIDDFG Sbjct: 541 VMQPNLYDRLMQLLAQYQVPPTALKLELTESTFMEYSHDVAALLNRLREQGIQIAIDDFG 600 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 GY++ L +L D IKID F+ + + IV +I +LA +L VVAE VETQ Sbjct: 601 VGYSSLSYLVQLPIDQIKIDRNFIVQLESKQHSQAIVNTIVNLAHNLNLEVVAEGVETQG 660 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q + +G QY QGYLIG P + Sbjct: 661 QLDWIRAVGCQYGQGYLIGLPLTADE 686 >UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE71_9SPHN Length = 749 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 125/715 (17%), Positives = 231/715 (32%), Gaps = 36/715 (5%) Query: 42 IFLAWMPLCVMLSILFIFGWR------GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTF 95 +A + + + ++ + + + T + Sbjct: 29 SAVAGITISAAFASATMYSSGHHLEVIAWFVAVAAIGLARVLLLRPGLRGTGEISAIAKC 88 Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 L A+ + + + + F + ++ + S G+ Sbjct: 89 KSLVILALANGVVWGLGGFAAATVATPGQFFMISILLSGMMGASAMSYGAIAMPVPAFVV 148 Query: 156 FFGDADAIFTVVDLLS-LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 G V + L T + L R S + I R + + Sbjct: 149 PAGLGFLAVWVAFPDAPLATGSIATIAYVAVLIRGAFSNERSFIAKLRAEERATDSAETV 208 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 L L + + G+ FL+L S Sbjct: 209 RLLMNDFTEQASDWLWEIDGGLRIVN-PSDRFIHVAGREGLQLSGKAFLDLFDETSERRQ 267 Query: 275 LNYNQNFLQ----------GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 L + A + + R + Sbjct: 268 LESELRNRRVFRKLTLPLTISGKRRWWALSARP-CEANGGFRGVASDVTAQREAEARINH 326 Query: 325 QALTDPLTLLPNFRALEQAPEQE-------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT L N + + L +D + ++ G + +R Sbjct: 327 MAHYDALTNLANRYLFNASLDHALNRLLDRHRICVLYLDLDQFKGINDTLGHAVGDALLR 386 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 + + L + + +L G E ++L + + + + + + Sbjct: 387 EVGKRLENTLNGRGLVARLGGDEFAVLLQDENLDHVAMTIAHRIMENLRDPYVIEGSEIC 446 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 +G D + L+ ++ + E + + L Sbjct: 447 IGTSIGVAFADPQGPSASDLMKHADLALYRAKELGRGKVV-VFESALVEFALARRELEMD 505 Query: 495 IRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +RTAL GDL L+ QP+ + + GY+ ++ + G++ PD+F+PL Q L Sbjct: 506 LRTALTDGDLRLHFQPLMDLQTNKILGYEALVRWHHPERGLILPDEFIPLAEQTGLIVEL 565 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ P + S+NL P L + ++ I+P + LEI Sbjct: 566 GEWVIREAAATARLLPGE---LTISINLSPAQLRSSQLLATVVSAVAHAGIAPSRLELEI 622 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE ++E M + +L FG RIA+DDFGTGY+++ L+R + IKID FV ++ Sbjct: 623 TEGVFLEDSEDCMRILRELRTFGVRIALDDFGTGYSSFGYLRRFPFNTIKIDRSFVAELR 682 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + IVR+I+DLA +SV AE +E Q ++L LG + QG+L+G+P P Sbjct: 683 ESDDCRRIVRAISDLAHGMGMSVTAEGIEDVSQLSMLRDLGCEVGQGFLLGKPMP 737 >UniRef50_Q0A8D0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8D0_ALHEH Length = 1017 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 97/589 (16%), Positives = 205/589 (34%), Gaps = 41/589 (6%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 ++S A F + I A+ R + ++ Sbjct: 412 VISPLRAADGTITHFVAVREDITESKRAESAIRLRERALESTANGILISDLRLRDNPIVY 471 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGV 285 + I GY + + + A+ + + + Sbjct: 472 ---VNPAFERITGYPRDEVVGRNGRFLVRDDKDQPGLEEIRSALRSRREAHAVIRNYRKD 528 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 T + +A + ++ ++ + + D LT LPN L Sbjct: 529 GTLFWNELFVAPVREDDGAVHYMVSVINDVTERKRYQAELEQRTHYDALTGLPNRNLLVD 588 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + +D + ++ G +R++ L ++ + + Sbjct: 589 RLHQALLYARRSGRHVALLNVDLDRFQIINESLGHAAGDQLLRTVADRLTAALRGFDTVA 648 Query: 395 QLPGSELLLVLSGPETEGRLQHMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E +VL+ + + + I + + + F + + Sbjct: 649 RMGGDEFNIVLTELRNTRDAELLAGELQEALAPSISVTGQDVFLSVSVGYTVFPDDGDGP 708 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ + S ++ + + E + ++ L + ++ A+++G+L L+ QP Sbjct: 709 EDLIRRASVAMHEAKRQGGGVIIR-YSERSEPRQINRLTLESDLQRAIERGELRLHLQPQ 767 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L G+++P +F+PL + L VLE++ LA Sbjct: 768 VDLDTGAMSGAEALLRWEHPRHGLVSPMQFIPLAEEVGLIIPMGRWVLETVATQLAHWQQ 827 Query: 569 DKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ--------AFSN 619 ++N+ L + + ++ + + ++P N Sbjct: 828 QGLPVVPVALNISARQFLHAELVEDVRQILEGHGVAPSL--------LELELTESLMARN 879 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 E ++ + +L G R+A+DDFGTGY++ LKR D +KID FV+ + + DA I Sbjct: 880 PEVAVQILRELKAMGLRLALDDFGTGYSSLAHLKRFPIDTLKIDQSFVRHVNEDGDDAAI 939 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + +A + L+VVAE VE + Q L + Y QGY RP L Sbjct: 940 INATIRMAHSLGLNVVAEGVEREDQLEHLKRQRCDYAQGYFFSRPLSLE 988 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 22/231 (9%), Positives = 45/231 (19%), Gaps = 10/231 (4%) Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF 157 A A LR T R R I + G + P+ Sbjct: 219 GPAGAALRSGQTTVLRELAQRRSPRPWRIEAVRCGFSAICALPLVAGRGGEGPVFGVLVI 278 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 D + + + + R+ + R+ + + Sbjct: 279 HSRDPSALDAAAVRVLDNLAANLSHGVWAQRLRGRQRRMRSELRKHARATENSP-----V 333 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP--FLNLTWAVSTLCLL 275 S L + + P V + P + L V Sbjct: 334 SVLITDAEARIEYVNPSFTRLTGYAPEEVIGRDPRMLGSGHTPPEVYRELWETVRAGRTW 393 Query: 276 NYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWH 323 + +++ L + + S+ Sbjct: 394 QGTVQNRRKDGQLIWERQVISPLRAADGTITHFVAVREDITESKRAESAIR 444 >UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Chloroflexus RepID=B8G9I9_CHLAD Length = 1101 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 126/676 (18%), Positives = 232/676 (34%), Gaps = 36/676 (5%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 T L ++ G T V + R+ L + W+ L Sbjct: 427 LTGYATNELIGRSLRILHGPATDSVTLNRLWEAMERQQPARFALLYYTRAGKPIWVDL-- 484 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + Y + F A F D ++ +L + + L R++ Sbjct: 485 SLSPVTDEYGKATHFIAL--HRDISAQKLAAFLEHDRSAILALLLQHAPVTAMLNRLV-- 540 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 L R L + + + L P IA + ++ Sbjct: 541 -----TLIERQRPNWLVWAELDGHPAAASKPLAGEADLIGPRLRQMIARHNQKAPIVLDL 595 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIY 312 + + L + + ++ +L+ + L + Sbjct: 596 HTHWDQLRHLSVSSGWIWPLAKAHGALAIFH--QQTDWVSESDQMLLRVATEL---FNLI 650 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 LN + + Q D LT LPN L++ E+ + + +D + ++ Sbjct: 651 ADHANLNAQLNYQVRYDTLTGLPNRNLLQERIDLALRDARERRHIVALLFIDLDGFKQVN 710 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR 424 G + ++ + + + + L ++ G E LL++ L Sbjct: 711 DSLGHPIGDRFLKHVSQAFAACARPQDTLGRMGGDEFLLLMPDLPDARLADIAAQRLLDA 770 Query: 425 ---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + L + F + + LL ++ Sbjct: 771 LQTPFLHDGHELRLTASIGISLFPRDGVDVVTLLKNADSAMHRAKEL-KRSGFLHYRPEH 829 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 S + ++ L +R AL++ +L +Y QP + G + ++ G + P +F Sbjct: 830 SRRAHTRLALEAQLRRALERHELAVYYQPQYDLVSEGITGVEALVRWHHPQRGPIAPGEF 889 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + +L VL + R SVN+ LL+ + + Sbjct: 890 VPIAEESDLIIEIGSWVLREACRQAMAWQQAGYPLLRISVNVSARQLLRPEFVAEVAAVL 949 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + Q + LEITE + + I+QL G RIA+DDFGTGY++ L++L+ Sbjct: 950 HATGLPAQYLELEITEGVMLDDPIYAARQIDQLRHMGVRIALDDFGTGYSSLAYLRQLRL 1009 Query: 658 DIIKIDGVFVKDIVTNT----LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 D +KID FV+ I ++R+I +LA + L+VVAE VET +Q+A L +G Sbjct: 1010 DALKIDQAFVRAIDEQQNVVTNSRALLRAIINLAHSLGLAVVAEGVETDEQRAALLSMGC 1069 Query: 714 QYLQGYLIGRPQPLAD 729 LQGYLI +P P + Sbjct: 1070 DVLQGYLISQPLPADE 1085 Score = 43.1 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 38/149 (25%), Gaps = 11/149 (7%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC---------TPYENDFIA 240 I+ + E R L LA L +++ L + Sbjct: 124 IILSGYDVTALLAADYALRNNEFRYRQLLELAPLLIIISTLPEGIIRYCNPAGARIFGVD 183 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVLI 299 PV + G+ A+ LL + + + ++ Sbjct: 184 DPAEPVNQPLTEFLSGEDHDLMRKRRQALRNGQLLQPARYHIYARDQIVRVIEVQGTLIE 243 Query: 300 S-FSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + +L + R+ +L+A Sbjct: 244 GPGEIQVLTIGYDVTDRVEAERQLNLRAR 272 >UniRef50_B6BNN5 Ggef/eal/pas/pac-domain containing protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNN5_9PROT Length = 835 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 102/559 (18%), Positives = 198/559 (35%), Gaps = 19/559 (3%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + + ++ + A SW L L N F + + + Sbjct: 272 DLDESRKREEELQKKETAMNEAQSIARVGSWSIDLKTNTLSWSNECYNIFGIEHGTQMNY 331 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-- 306 +F + K L W + ++ + + +I ++ Sbjct: 332 ELFVEMIHKDDKENALLAWDEALKGAKFEIEHRVIVGSETKWVREKAKFVIDEDGTIVSG 391 Query: 307 -YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRI 357 V+ + + A D LT N L + + L + Sbjct: 392 IGTVQDITERKQYENKLERLANFDTLTGFANRTFLFSYLQKVVHRCKRNNKIAALLVLDM 451 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ YG + + I + L ++ + + +L G + ++L Sbjct: 452 DHFKDINDSYGHDIGDELLALIAKRLSTRIRGGDFIARLDGDKFAIILEDINNSDDAAMF 511 Query: 418 VNILNSR---QIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + +NT + + A N ET + L+ + Sbjct: 512 AKEIMEEVEKPFYLSNTSEVHICSTAGIVIAPENAETAEELIQFADTALYKGKKDKRG-G 570 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + + ++ K + L +R A++ + LY QP +K G + ++ Sbjct: 571 ISYYSDELTELAKKHIELATRLRRAIEHSEFELYYQPQVHIKSKRIVGAEALIRWNDPIH 630 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G+++P+ F+PL + L V+ + SVN+ L +NI Sbjct: 631 GLISPNDFIPLAEETGLIGAIGEWVIRDACRQGKLWIDKGYNLSISVNVSANQLRHQNIT 690 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I K + +++E+TE E ++ + + G R+AIDDFGTGY++Y Sbjct: 691 RLIDSTLKETGFTADKLVIELTESAVMQREEEAVAMLHAIRAKGIRLAIDDFGTGYSSYS 750 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR DI+KID F+ ++ D IV++I + A ++AE E +Q L + Sbjct: 751 YLKRFPIDILKIDKSFIDEVPFENDDMAIVKAIIAMGSALGYKILAEGTEHIEQIDFLEE 810 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G QY QGY +P ++ Sbjct: 811 HGCQYYQGYYKSKPLKTSE 829 >UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V32_COLP3 Length = 682 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 97/571 (16%), Positives = 198/571 (34%), Gaps = 27/571 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFI 239 Y + + + + L K + ++++ + I Sbjct: 89 YFRQQTQNSAQILLFIQESNYAELTKTSIIEQIFDHTNEAIIVTDNQGLIQTVNKSFSNI 148 Query: 240 AGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY + +Y + + + Y ++ Sbjct: 149 TGYSEEEVIGKTPAILNSGKQDKYFYKKFWQQIIDQGSWQGEIWNKRKNGEVYPEWLNIS 208 Query: 297 VLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + + H A D LT LPN L + E Sbjct: 209 SIRNKESQISNYICQFTDITNRKKSEEELHFHAYHDSLTSLPNRHLLFEKLNHLCVLHQE 268 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 Q + +D + ++ G + ++S+ +++N+ + + G E ++V+ Sbjct: 269 QPTYFAVLFCDLDRFKMINDSLGHDVGDELLKSVANRFEAKLRDNDIIARTGGDEFIVVI 328 Query: 406 SGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G + L + + S +F + E ++ L+ Sbjct: 329 EGEKALKNLDKICLQILSLFEVPFQTKYGEFKTTISIGVSQFPSDSEDVRELISFADVAM 388 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 + + +++ L + I A+++ ++ QP N E G Sbjct: 389 YKIKKSGGNH-YSFFDVKEKALIQQRLELESEITQAIEKDQFAVWYQPQVNTQTHEVYGV 447 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVN 578 + ++ + G++ PD F+P+ VL++ + L + ++N Sbjct: 448 ECLIRWNHPEQGLIPPDLFIPIAEANGSIKELGYFVLKTACQQLRQWRIKNIFTGVMAIN 507 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + ++ ++ + + +++ LE+TE + + L + G ++A Sbjct: 508 VSLRQFERNDLLAQVKKTLVDEMLPAESIELEVTESLFSEDNNYHTPILCALRELGVKVA 567 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ +RLK L D +KID FV +I D IV + L+K + V+AE Sbjct: 568 IDDFGTGYSSLQRLKSLPIDNVKIDKCFVDNIEHCPEDVAIVMATILLSKTFKVDVIAEG 627 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +ETQ+Q L LG QGYL RP D Sbjct: 628 IETQEQADKLSDLGCFNQQGYLYSRPLKAHD 658 >UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT05_CHRVO Length = 825 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 103/563 (18%), Positives = 194/563 (34%), Gaps = 23/563 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--LLLCTPYENDFIAGYLVP 245 R IV RR + + A+ ++ P Sbjct: 238 RRIVGVLQDITGQRRTEERLRQAATVFDSTAEGIAILDARRKVVSVNPAFTQQTGYSPEE 297 Query: 246 VFFIIFTLGVGKLRYPFLNLT--WAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---IS 300 + + F+ + + L N N+L ++ ++++ Sbjct: 298 AMAWPDIDPLYQTPNNFIQPSSPASPEERKLWQGNVNYLHKNGKVLNIWESISIVPGPDG 357 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + + + A DPLT L N R L+ ++ + Sbjct: 358 GVANYVLVFSDISSVLAAQEQLDYLAKHDPLTNLCNRRMLQDRMEYELAQAMRRQKMMAV 417 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D+ + ++ G + +I L ++ ++ + +L G E +VL E+ G Sbjct: 418 LLIDLDHFKTINDSLGHGHGDQLLATIATRLQGSVRASDTVARLGGDEFCIVLGDIESPG 477 Query: 413 RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + M L + + + + + LL + Sbjct: 478 DVDLMGQKLLQRLAEPVRLEQMVCYVTGSIGISMAPTDGMGVDELLRNADQAMYGAKHAG 537 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + ++ + + + AL+QG L QPI + + +L Sbjct: 538 RNR-YCFFAPAMQKAAEVRLQISSGLHLALEQGQFRLEFQPIVDLSCGRIRKAEALLRWH 596 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 G++ P F+P+ + L A+ V + L ++ + R ++N+ L Sbjct: 597 HPQHGVINPAVFIPIAEECGLIAKICEWVYDQALDFIRAWRDMLRDDLRIAINVSALHFR 656 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 R + R + +A++LEITE ++ G +IA+DDFGTG Sbjct: 657 DLRNPVRWLDKLTRAGVPGEALMLEITESLLLDADHKVQEALDLYRAAGIQIALDDFGTG 716 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y+ LKR + D +KID FV I D + +I +A L+V+AE VET Q Sbjct: 717 YSALSYLKRYRLDYLKIDQAFVGQIAEEPRDHALCEAIVVMAHKLGLNVIAEGVETPAQA 776 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 A+L ++ QG+L RP P Sbjct: 777 AILQACRCEHAQGFLYSRPLPAE 799 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 13/153 (8%), Positives = 31/153 (20%), Gaps = 2/153 (1%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 L + R + + L R A + + + L P + Sbjct: 114 ATLQMAMVRFGIQRRADEQLGRMGKAMQAAELDVWEWRVETDQMQMFSLTGSEPLASGLA 173 Query: 240 AGYLVPVFFI-IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + F + + L + + + E Sbjct: 174 GNESIRHFIEQVDARDAAAVSDAISLARDHGQALDIQFRARTGAEQDERWLRARARCFDD 233 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQAL-TDP 330 ++ +++ R A D Sbjct: 234 GEPGRRIVGVLQDITGQRRTEERLRQAATVFDS 266 >UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=Q6LQD7_PHOPR Length = 1053 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 94/485 (19%), Positives = 183/485 (37%), Gaps = 18/485 (3%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWL 318 ++ + +N + T ++ + + + Sbjct: 551 IKHIRQQLKAGRTINRVITRKKSDNTVCYEDETISPIRNDTGKISHYISTGKDITERVLF 610 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLM 370 + H A D LT LPN L Q EQ + +D + ++ G Sbjct: 611 ESKLHKLAHYDLLTELPNRLLLLQHIEQAITNAEEMKTSVVVFNIDLDYFKKINDSLGHD 670 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH 427 + + +I + + +++ + L +L G E +++ + + + + + + Sbjct: 671 VGDKVLITIAKRITRSLRDEDVLARLGGDEFAILIQSDTSSQSIATLAERIINNICASLS 730 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 L + + N LL + + ++ + Sbjct: 731 IEEKSLSITASMGIAVYPENSVDSDALLKNSDIALYHAKDQGRNR-YCFFTPQMGIESVQ 789 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L + +R +L + QP N + G + +L +G I +P +P++ Sbjct: 790 RLQLESDLRKSLGTDQYTFFYQPKVNAKTHKVCGIEALLRWKNEEGQIQSPLGIIPILEN 849 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L ++ + LA + F++N+ LL +I + + +P Sbjct: 850 SGLIVNVGETLINQACEQLAIWQSNGLDLHFALNISARQLLHSDIVDTVYKAVTMSGCNP 909 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE ++ + + + +L G +IAIDDFGTGY++ L R I+K+D Sbjct: 910 HYLELEITESVVMADVKLAFDKLIKLEALGVKIAIDDFGTGYSSLAYLSRFPIHILKVDR 969 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+D+ N I RSI +LA + VVAE VE + Q L +GV+ QGY G+P Sbjct: 970 EFVQDLPMNKDSVTITRSIIELAHNLGMLVVAEGVENEGQIKFLTGIGVEEFQGYYFGKP 1029 Query: 725 QPLAD 729 P+ + Sbjct: 1030 MPIDE 1034 >UniRef50_A7BZ46 Diguanylate cyclase/phosphodiesterase n=2 Tax=Beggiatoa sp. PS RepID=A7BZ46_9GAMM Length = 565 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 95/509 (18%), Positives = 170/509 (33%), Gaps = 59/509 (11%) Query: 274 LLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + ++ + + + M+ + + + A D Sbjct: 41 VQDFEYQAYCRDRRIVWVKETVRAVRDNNGQISYYEGMLEDITQRKLTEEKLRYDATHDQ 100 Query: 331 LTLLPNFRALEQAP-------------------------EQEAG---------------- 349 LT L N A + Sbjct: 101 LTGLFNRTAFTDELTKTLIRLKAEWKTENGYQDSESDVERENEKEVETDNETASFPLSPF 160 Query: 350 -----KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +D + ++ G ++ + I L M EN+ + +L G E L+ Sbjct: 161 SFPRYFAALFIDLDRFKIVNDSMGHLVGDELLTEIASRLDKEMTENDIVARLGGDEFALI 220 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ + + S+ + ET +L Sbjct: 221 FKHIPDLAGLEQRTHQIQQQLSQPYFLKDETFKTTASIGIALSKPEYETADEVLRDADTA 280 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 ++ + + + + + +R A++Q LY QPI + G Sbjct: 281 MYEAKRQGGGK-FVIFQPGMHTRVVNLLRMERDLRQAIEQQQFCLYYQPIIESATGKTIG 339 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRF 575 + ++ + + G++ PD F+PL + L L V E+ L Sbjct: 340 LEALVRWIHPEQGLIPPDLFIPLAEETGLIKELGLWVFETACFQLRQWQTQFIHHADLGM 399 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 ++N+ P+ L Q N + + ++ I +EITE N E +M + L K G Sbjct: 400 NINVSPIQLKQPNFVHLVSDILEKTGIKSDTCRVEITENAMIQNPEGAMAILHDLKKLGV 459 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 + IDDFGTGY++ L++ D +KID F++ I + A I +I L +A L VV Sbjct: 460 LLYIDDFGTGYSSLSYLQQFPIDALKIDKSFIQKIDASVKSAQIAHAIIALGEAFGLKVV 519 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRP 724 AE VE A+L +LQGY RP Sbjct: 520 AEGVENNFHIAMLKATHCHHLQGYYFSRP 548 >UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43017 Length = 573 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 110/559 (19%), Positives = 208/559 (37%), Gaps = 24/559 (4%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL---LLLCTPYENDFIAGYLVPVFF 248 + + A EK +L + +L+ C + Sbjct: 7 ERVDNTMKFDETQAGFSDLEKEYMSLFEHSPYLLLVINAAGECVRVNEAGLHMNEWTRKE 66 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET---EYSLAFILAVLISFSVCL 305 II + L + W +++++ T Y+ + + + Sbjct: 67 IINQK-IEHLTDIYDEKAWDEVMSGNVSHSEKAGSVDYTHSYVYTWIPTIIEHKAAGAVV 125 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRI 357 L M + + A DPLT LPN R E + + + + Sbjct: 126 LGMKKSAAECSEQQDEVYRLANEDPLTNLPNRRCFMNYLENKLLHAASSKEKLAVLFIDL 185 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D ++++ G + ++ I L + E + +L G E ++V++ + + + Sbjct: 186 DRFKYVNDTLGHLFGDRVLKHIAERLQAHLPEKSMIARLGGDEFVVVMTDVKEKEEPVSL 245 Query: 418 VN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + + N + LL ++ A L Sbjct: 246 TEDLLTIIREPLIMDGFEFTLTGSVGIALSPENGIDAEALLTSADAAMYRAKAKGSDR-L 304 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 + V + ++ + N +R A+D+G+ LY QP + + G + ++ G Sbjct: 305 EVYNRDVYQEFSRYFHVENDLRKAIDRGEFALYYQPQFCLESGDVCGEEVLVRWKHPIEG 364 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIA 590 ++P +F+ + + L +L + A + SVNL LQ NI Sbjct: 365 TISPGEFISIAEETGLIIPIGEWILREACRQKAKWINEGYPKVPMSVNLSLKQFLQHNIV 424 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I ++ K + P+ + LEITE + + ++ + QL K G RI++DDFGTGY++ + Sbjct: 425 HTIEKILKETKLPPEYLDLEITESVTV-DLDRTLDILNQLIKVGVRISLDDFGTGYSSLQ 483 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 + +L +KID FVK I I+ I L ++ L V+AE VET++Q L K Sbjct: 484 YVGQLPVHELKIDQSFVKKIGKGKEGEAIISMIIHLGRSLELKVIAEGVETKEQLDFLQK 543 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G +QGY +P + Sbjct: 544 QGCDLVQGYYYAKPLSTEE 562 >UniRef50_B1XK84 Two-component response regulator (ABC transporter) / (GGDEF domain protein) n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XK84_SYNP2 Length = 868 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 114/613 (18%), Positives = 227/613 (37%), Gaps = 47/613 (7%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 + + F + L + F ++++Y + ++ + + + RR+ + E Sbjct: 245 AIAQWLEPPETFNWLSLQNFFFSLIVYLPFLFLGWFILRNYSLKKEIKRRNQIETNLLES 304 Query: 213 RAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG----------KLRYPF 262 + + +S+ + +E ++ Y + I + + Y Sbjct: 305 QQRYANLANTVSIGIFRTNLRHECIYVNDYYCKLLAIQPEEALHKGWLEKVYPDDIDYVR 364 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLN 319 +++ L F + + + + + + Sbjct: 365 EQWLKSITNQELFTLEYRFQRSDGSILWVYGQGTAELDSKGEPQGYVATITDISTRIKME 424 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYGLM 370 ++ AL D LT L N L + + L +DN + ++ G + Sbjct: 425 QQLKHDALHDRLTGLANRNLLIERLNLALKRYKRYPIHEFAALFLDLDNFKVVNDSLGHV 484 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIH 427 + + + L +++ + +L G E +++L H+ + + + Sbjct: 485 VGDELLIEVAHLLKSFIRDTDVAARLGGDEFVILLEEIHGVEDAVHIADRILNALNMPFQ 544 Query: 428 WNNTGLDMGYGAAW--------GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 +N D E+ Q LL ++ + + Sbjct: 545 ISNY--------GVFITTSIGIIIGDSRHESAQDLLRDADIAMYRAKQNGKSQ-YAIFDP 595 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 + Q +++ L IR+A+++ +LY QPI N E EG++ ++ G+++P Sbjct: 596 QMHLQAMQRLQLEGEIRSAIEEKQFVLYYQPIINLEQGNIEGFEALIRWQHPQRGLLSPY 655 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIR 595 +F+ + + L +L++ + L K + VNL L + + R Sbjct: 656 EFIDVAEETGLIIPLGEWILDAACRQLFEWQQAFKTPLKVHVNLSVKQLQDS-LLFSLDR 714 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 L +RY + P + LEITE N + + + Q+ G I++DDFGTGY+ L +L Sbjct: 715 LLERYPVFPNTLGLEITESMLIQNIDITCRLLNQIRLKGVFISVDDFGTGYSCLSYLHQL 774 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV N + +I SI L+K+ + VAE +ET+QQ L Q+ Sbjct: 775 PIDALKIDRSFVNISELNDRNRVIAESILALSKSIGIKTVAEGIETKQQYQWLKSQDCQF 834 Query: 716 LQGYLIGRPQPLA 728 QGYL RP L Sbjct: 835 GQGYLFSRPVSLD 847 >UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodopseudomonas palustris RepID=Q07J13_RHOP5 Length = 891 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 116/699 (16%), Positives = 231/699 (33%), Gaps = 35/699 (5%) Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 +FG G + + T + R+ GT R Sbjct: 182 GLFGANGEFVGVIARTVPLESYERFFASVALGETAAVTMFHTDGTFLTRYPEGTMTR--- 238 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMY-------LVGSFFDFPLKISTFFG-DADAIFTVVD 168 + L P I L S I D++ Sbjct: 239 -GENLRASLLEPHFAAPAAIVRLTSPFDGEERLGASHKLAQAPIIVVASRGVDSVLADWR 297 Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 ++ A + T M + + +++R + L Sbjct: 298 QQTVALASAALAAIAVIATLMFLLGRHLRRREDDTQRQLRLEKQRLRLAINNMTQGLTLF 357 Query: 229 ---LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 ++ Y + + + + ++ F + + + + Sbjct: 358 DAEARLVVCNQRYLEIYGLTTEMVPPGITLREMIQYFRDRGGDRDVIERFLCSGDDFSRG 417 Query: 286 ETEYSL---AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 E ++ + ++ + + R A D LT LPN + Q Sbjct: 418 SHEVTIGDKSLLITREPVEGGGWVTTHEDITERKRAEARIAYLAHNDELTDLPNRSSFRQ 477 Query: 343 APEQEA-------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + + ID+ + ++ G ++ + I L + ++ + + Sbjct: 478 HVQSALANLGDGFNVALLYVDIDDFKGINDTLGHVVGDLLLHHIASDLKRAVGKDGFVAR 537 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNSRQIHW---NNTGLDMGYGAAWGRFDGNQETLQ 452 L G E +V++ E + + + S + L + +TL Sbjct: 538 LGGDEFAVVVTNIEAMDEVTALTERVQSALYEFHDCGEHRLSADASIGIAIAPQDGKTLD 597 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ + + + + + LL ++ A+ + ++ QP+ Sbjct: 598 DLVSNADLALYAAKSEGR-RTYRFFKPEMEVALKARHLLGADLKRAVVEHQFDVHFQPLV 656 Query: 513 NKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G + +L G+++P +F+P+ + L VL + AT P Sbjct: 657 DLRSDQVVGCEALLRWRHPTRGMVSPAEFVPVAEEIGLIDELGEWVLAESCREAATWPA- 715 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ P+ ++ ++ + + Q + LEITE + ++++ + + Sbjct: 716 --HMTVAVNVSPIQFRRRTFPLKVAAALGQSGLPAQRLELEITEAVLIRDDDAALAILHE 773 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G +IA+DDFGTGY++ L R D IKID FV + A IV+++ +A A Sbjct: 774 LRALGVKIALDDFGTGYSSLSYLHRFPFDKIKIDRSFVATLAEEKASATIVQAVVSIAAA 833 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AE VET QQ+ LL + G Q +QGYL P P A Sbjct: 834 GDKITLAEGVETIQQRDLLKQFGCQQMQGYLFSPPVPAA 872 >UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=Q12PF1_SHEDO Length = 888 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 100/573 (17%), Positives = 201/573 (35%), Gaps = 24/573 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 L +I + +L + T+ + + Sbjct: 304 AVTAEGELVGVIGVTRNIAKHKAAEEQLNLAATVFSNTVEGVVITDRKGFITEVNSAFTK 363 Query: 239 IAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 I GY + + F L + + Y + Sbjct: 364 ITGYELDEVKGKNPNVLSSGHHDQLFFEKLWNTLLIQGRWQGEIWNRRKNGEVYPQEITI 423 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + + + + + +L DPLT LPN Sbjct: 424 SAVYDDNDTIAYFVAVFTDVSEQRNTQAKLDKLSLHDPLTQLPNRAQFMSRIDNAIYYAK 483 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 ++ + + +D + ++ G + + + L ++ L +L G E + Sbjct: 484 QEGTQLAVVFIDVDFFKHINDSLGHVAGDTILVELANRLSSILHPGAVLSRLGGDEFS-L 542 Query: 405 LSGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 L+ + L +VN + S N + + + + + LL Sbjct: 543 LTNMASTDNLIAIVNRIFSVFEAPFSCSNGQSIRLTASMGLALYPSDGKDNDGLLRNADA 602 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGE 517 ++ E ++ ++ + + L + + L L QP + E Sbjct: 603 AMHRAKQDGRN-NYAFYTEAMTQESVRLLQLQSALHEGLKMQRFSLVYQPKVDLHSLETM 661 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 G++ +L G ++P F+P+ + L + VL++ + K R + Sbjct: 662 GFEALLRWNDPILGSVSPAVFIPIAEKTGLINEIGMWVLKTACEQGVRWLSQGKLFNRIA 721 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ L L + + + ++ + Q + LE+TE N ++ +++L + G Sbjct: 722 VNVASLQLQRNSFVDDVQQVLLDTGLPAQHLELEVTESCMLQNPAEAIIELKRLREMGIT 781 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY++ LK+L D +KID F+K+IV + +A I +++ L A +L +VA Sbjct: 782 LAMDDFGTGYSSLSYLKKLPLDKLKIDRSFIKNIVQDANNAAIAKAVIALGHALNLQIVA 841 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L + QGY P+P + Sbjct: 842 EGVETKEQAEFLRLNDCEQAQGYYFSHPKPSHE 874 >UniRef50_Q312J4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q312J4_DESDG Length = 904 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 129/741 (17%), Positives = 240/741 (32%), Gaps = 46/741 (6%) Query: 26 QLSRFISPLAIIHSSYIFLAW-MPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFL 84 + +P+ + H S + + ++ +F G+ G Sbjct: 157 PDGWWFAPVFVEHKSVVAVQVCTADAAQAPVVAVFDMHGLALRYAGQLGIGDSGSGFVLD 216 Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV-----------WQRLFWLGLVTP 133 + +L V G L SR V R + Sbjct: 217 ERGTVLFHAGSPVAGRNVFDGMHAGFPALEQLDSRMVQEPSGAGGYEYATRRSGGTVRKM 276 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + L TA L + ++ R + Sbjct: 277 VAWNTVELPPHRLVVGLAAAVQDINADMYALNRQQGLLAVTAFLFFALMALGFLREQRTR 336 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 L R + W A LL + I GY F L Sbjct: 337 ----ALRRSAELYRQLADTAYDIELWHDAEGKLLY---VSPSCERITGYPAADFMADAGL 389 Query: 254 GVGKLRY----PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLL 306 + F A L + L ++ + + + Sbjct: 390 LERVVHREDLPAFRMHMSAPGMLEGESLEYRLLHRTGKVRWVSVVAREIWTSDGICQGVR 449 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRI 357 VR S+ + + ++ D LT + N + G + L I Sbjct: 450 SSVRDVTESKLMEKELDYKSQHDELTGVANRSLCLARIRKAMVRTAPRPEVGFAVLFLDI 509 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + + L+ ++ + + + G E ++VL M Sbjct: 510 DRFKIINDSLGHEQGDMVLAEMAERLVASVRPCDTVARFGGDEFVIVLEELPGPREAVRM 569 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAA-WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 ++ + + + + G+ Q + + ++ A Sbjct: 570 ARLIKKRFKEPLLLEGHEMRITCSIGMIFEYGGDSVGAQAAVRNANIAMYRAKAAGRDK- 628 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 L + + L N +R+ L + + + QP++ + G++ ++ + Sbjct: 629 LKVFRPKMLAAAASVMTLENDMRSGLQRDEFFMEYQPVQRSDDGTLTGFEALIRWRHPEK 688 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQK 587 GI+ PD F+PL + L L L +A +VNL Q Sbjct: 689 GIIGPDHFIPLAEESGLIVDIGLSALRKSCCEMARWCRRYPGCEELFLAVNLSARQFSQP 748 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + + + + P+ + LEITE SNAE+++ + +L + G ++AIDDFGTGY+ Sbjct: 749 DLVTCVSGILQDSGLDPRQLKLEITESTIMSNAETALAMMHRLKQIGVQLAIDDFGTGYS 808 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L++L D +K+D +FV + IVRSI LA + L+ VAE VE +Q + Sbjct: 809 SLAYLQKLPVDTLKVDRMFVSAMEEQAGCLEIVRSIIVLANSLQLNTVAEGVENSRQLEM 868 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L LG Y+QG+ +P P+A Sbjct: 869 LRNLGCSYVQGFYFHKPLPVA 889 >UniRef50_Q1YF74 Possible signaling protein with EAL, GGDEF domains n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YF74_MOBAS Length = 808 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 115/740 (15%), Positives = 248/740 (33%), Gaps = 27/740 (3%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV 64 + + ++T F + + ++ +F+ + + + L+ + R Sbjct: 53 SAAVAGLGVWTTHFVAMLGFRP-DVVLGYDPMVTIVSVFVGILFVGLPLAATVLVHSRAA 111 Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 L + + H + + + ++ ++ + R + Sbjct: 112 RMALGAIAGLGVGAMHFTGMSALQGCLAAYDPLVTLISLFAGAGFFAAAMSMPPRGKQRL 171 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 +V + + + G + + + V L +L + + + Sbjct: 172 AVATLMVLGVCFLHFIAIAGLTLSAAPAAEVWIVEPVTLSAFVALAALMIFITAFILAVN 231 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDF 238 S A S + + L + ++ L N+ Sbjct: 232 GEKLDASSRAAAADAAEHLRVLSAALQNMSNGLVMVGPDGIITLHNERAYELLGIGPNEL 291 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 +G + F F G + + + + + + Sbjct: 292 RSGLALSSFLDNFGHKAGWDAARIDRVIDNHTVWMRRSTITRVEHHLADGRVIGVACCPM 351 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKSFCC 354 + + + A D LT LPN R+ + + + Sbjct: 352 AD--GGAILTYDDMTEARQVQATITHMAYHDALTGLPNRRSFQDELKARFDSAKPTTIVM 409 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G + + + L N+ +++L G EL ++ P + Sbjct: 410 IDLDRFKAVNDTLGHPVGDALLIQVADRLRACCNPNDLIFRLGGDELAIL---PGDDEHS 466 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + R + + +G D + + Q ++ + Sbjct: 467 DTLARRVVEGFERPFTADKHRISIGCSVGLATADDVDDPDLV-VRQADLALYKAKKNGRN 525 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 ++ E + K+ L + AL +G L QP+ N E G++ ++ Sbjct: 526 R-IERYESGMMEDAVKRRDLEMDMVRALKEGQFSLNYQPLFNLPTRELVGFEALIRWNHP 584 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G++ P +F+PL + L VL + + P + SVN+ P+ L + + Sbjct: 585 TLGLVPPVEFIPLAEETGLITEIGEWVLNEACREASHWPGE---LYVSVNVSPVQLHKTD 641 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++ R + ++ Q + LE+TE + + L G RIA+DDFGTGY++ Sbjct: 642 MLRQVTRALAEHGLTAQRLELELTETAMVDDGRRINATLTALRSLGVRIAMDDFGTGYSS 701 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+ D IKID F+ + ++R++T +AK S++ E VE+++Q A L Sbjct: 702 LAHLREFDLDRIKIDRSFIDSAPDDVSSLAVLRAVTMMAKDLSIATTGEGVESEEQLARL 761 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 LG QGYL+GRP Sbjct: 762 LDLGCGTAQGYLLGRPMTAE 781 >UniRef50_B0KTQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Pseudomonas RepID=B0KTQ2_PSEPG Length = 861 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 115/578 (19%), Positives = 206/578 (35%), Gaps = 39/578 (6%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCT 232 + L + R + + ++ E+R ++ A+ + L Sbjct: 273 VMLYLCRHALRSSRAVGLTLLHLQQSNQALEASEQRFRAVAESASDWIWETDRQQRLTYL 332 Query: 233 PYENDFIAGYLVP--VFFIIFTLGV--GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + GY V + + L P+L++ L N + Sbjct: 333 SQRFANVTGYPVDDWLGHPLNQLLACDTTPLSPWLDVLTTADPQQLANLRCTYRDPNGQN 392 Query: 289 YSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + ++ + R +L DPLT L N L + EQ Sbjct: 393 RYCRISARAIWHDGKALGFRGTASDITDEVDAHARIQHLSLHDPLTGLANRNKLARHLEQ 452 Query: 347 EAGKSFCCLRID------------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + D N + ++ G ++ + L ++ + + Sbjct: 453 ----ALLRGN-DSPPLTLLLLDLDNFKPINDSLGHAAGDAVLQEVATRLRDTTRDGDLVA 507 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E +LVL G + + L + I ++ L +G + Sbjct: 508 RLGGDEFILVLGGMDNRSEIDRFCARLIGLLQQPIIFDGQQLHIGASIGVAQTRTQGFDA 567 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ Q+ A ++ Q + L N +R AL + +L+ QP Sbjct: 568 GELIRCADIALYQAKADGKN-TWRYFAAEMNQQIQYRRQLENDLRRALRNQEFVLHYQPR 626 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L G++ PD F+PL Q ++ VL + P Sbjct: 627 YRLGDLRIVGVEALLRWQHPQEGLLGPDTFIPLAEQSDIIVALGRWVLREACRTAHDWPN 686 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 SVNL P L+ ++ + + Q + LEITE ++ E ++ + Sbjct: 687 ---DVLVSVNLSPAQFLRSDVVADVREILLDTAFPAQRLELEITENVMLNDIEGALGTML 743 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN-TLDAMIVRSITDLA 687 L + G R+ +DDFGTGY++ L+ D IKID F+ + N D +V++I +L Sbjct: 744 SLKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFISGLNNNGGSDRAVVQAIINLG 803 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +A L+V AE VE++QQ L K +QGY + RP Sbjct: 804 EAMGLTVTAEGVESEQQLKALEKDRCHEVQGYYMSRPL 841 >UniRef50_Q3SK35 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=2 Tax=Betaproteobacteria RepID=Q3SK35_THIDA Length = 730 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 132/719 (18%), Positives = 241/719 (33%), Gaps = 28/719 (3%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 ++ +P A++ P ++ G T+ F LS + Sbjct: 2 IAYLCAPHALVLQKEASHRLRPKVSRPRTRYVIGRLHSQRAAAHPASTSPLMFRLSRYYS 61 Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 L + VV+ R + + L I S Sbjct: 62 IASLVGISIVVVVLSWFYRQLAIETLLA-----HQTRSNVDLTRSYANAIWHRFDAFVSA 116 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 A L + ++ ++ + S QI + P Sbjct: 117 SGEWSAEDLRRRPEVASLHAATLAQMHGMNVVKVKVYNLSGTTVYSSEAGQIGEDKHDNP 176 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + S + + + IA YL I G G ++ F T Sbjct: 177 GFLSARAGKPASEIVFRDQFYAFEEVIADRNLIATYL-----PIHEHGNGPVKAVFEVYT 231 Query: 267 WAVSTLCLLNYNQN-FLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + Q + GV +L ++ LI + + + +R Q Sbjct: 232 DVTPLVAKMEATQTKIITGVVLALALLYLFLFLIVRRADQIITRQD-RERQDNEQRIRHQ 290 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN + + + L +D + ++ G +R Sbjct: 291 AFHDSLTGLPNRNSFLEHISEAIDRSKRSGNPGALLFLDLDRFKLVNDSLGHDAGDQLLR 350 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLD 434 + ++E + +++ G E +++L + + + + + Sbjct: 351 ITASRIQKCLRETDMAFRMSGDEFVVILESVDKGEHAALAAQRVMQEMAVPMSLSGCEVI 410 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + F G+ +Q LL + ++ + ++ +++ + Sbjct: 411 VNVSIGITTFAGDSADVQALLKEADSAMYRAKQVGQNH-YEFHTPDMNSAAHERLSMETD 469 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 ++ AL + +L+ QP + K + +L G++ P+ F+PL+ L Sbjct: 470 LQRALQNQEFVLHYQPKIDTATKAIVSVEALLRWNHPTRGLVLPNTFIPLLEDTGLINPV 529 Query: 552 DLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL R SVN+ + + R + + + LE Sbjct: 530 GEWVLLQAACQAQAWIDAGLEPIRMSVNISAKQFRSHILVETVRRTLGASQLESRYLELE 589 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE NAE S+ +++L G ++IDDFG+GY++ LK+ D +KID FV D+ Sbjct: 590 LTESMFIENAERSIQIMQELKCLGVSLSIDDFGSGYSSLAYLKQFPVDYLKIDRSFVTDL 649 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+N DA I +I LA + L +VAE VE Q Q L K G LQGYL GRP + Sbjct: 650 VSNKKDAAIAVAIAALAHSLDLKLVAEGVEDQAQVEFLEKQGCHELQGYLFGRPVSAEE 708 >UniRef50_Q1K260 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K260_DESAC Length = 774 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 125/737 (16%), Positives = 247/737 (33%), Gaps = 30/737 (4%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILF---IFGWRGVVPVLC 69 + L + V + + I + L + ++ I+ + + Sbjct: 33 RWQLISAIVVFCLVAEIMLVWSQSTFDLSILQYALLLGTLSTLNLYNLIYHYYYLKIARF 92 Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWL- 128 + + + L + L +R + L Sbjct: 93 AFIDHLHILLDIFVVTVLIHFTGGGNS---WLWPLYLVTTIEAAFLLENRRDVLGIGALN 149 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 GL + Y + + PL + + + + + L TA+ + R Sbjct: 150 GLFYAWALIAGHYNLLPYIYQPLDGTPALSETFLLLLWLWVTLLNTAIAFICTFLTHALR 209 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + + F + + D + + Sbjct: 210 RKTAEASTLARRLGNFLNHANDLIIQFRPDGTIDYANQASRSILNIDPDSNEINISSLID 269 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-- 306 + N T +T L+ N + L + +L Sbjct: 270 PTDRPRWQRQVLLLENGTSFPATELLMRTNS-----DQQAIILDSNVTLLEENDGQWTLW 324 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRID 358 + R R D LT L + + + +F + ID Sbjct: 325 GIFRDITARRQAEARLDQLTNFDQLTGLAHRSNFMERAEQVTLMAKRERKNTAFLIINID 384 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + ++++ + LL ++E + + +L G E +++L E+ + ++ Sbjct: 385 RFKLINDALGSAIGDEVLKAVSQRLLNQVREVDVVGRLNGDEFVIMLVNVESADIVHNLA 444 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + I N+ L + + + +T + LL Q + + Sbjct: 445 VKITQALTPMIAINSHELFLTTSTGIALYPQDGDTPEELLKQAEIALLSVKSTGRN-GIQ 503 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + + ++ LLN + AL Q +L+ QP N + + ++ + G Sbjct: 504 FFTDQIDLNQNSRLRLLNGLHLALQQQQFVLHYQPKVNIHTGQITSVEALIRWNHPEMGW 563 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P +F+PL + L VLE + R +VN L Q+++ Sbjct: 564 VMPTEFIPLAEESGLIGIIGRWVLEEACRQCLIWQQQGLPPIRMAVNFSGHQLQQESLLK 623 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I + K+ ++ Q + +EITE N E ++ ++ + K G IAIDDFGTGY++ Sbjct: 624 SITDVLKKTGLAAQWLEVEITETVIMQNPEVTINILQAIQKLGVHIAIDDFGTGYSSLAY 683 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR + +KID FV+DI + DA IV +I + L++VAE VET Q+ L + Sbjct: 684 LKRFPVNTLKIDRAFVRDIEQSDTDAAIVGAILKMGATLKLNIVAEGVETHGQRKFLEQH 743 Query: 712 GVQYLQGYLIGRPQPLA 728 +QG+L P Sbjct: 744 NCHEIQGFLYSPAVPPE 760 >UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS52_BACS4 Length = 607 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 115/550 (20%), Positives = 208/550 (37%), Gaps = 23/550 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFFIIFTLGV 255 + R AL VL+ D + + + + Sbjct: 42 QALDQQYEQLISRFKIALETTALIVLVNDTGAITYVSEEFCDLLDYSESELIGVNYLSLQ 101 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIY 312 + + +++ + ++ L+ L + LI S L M R Sbjct: 102 HRSFKERELFSNTLASQKITSFEMIPLKKSGNPLILKTQIMPLIKSNQESDIFLIMHRDV 161 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMS 364 R + + D LT LPN E+ + +D +F + Sbjct: 162 TRLKQAEKVIKELGAVDTLTGLPNRDKFERDVRSRIEMKHAEKFPFAILFFDLDRFKFYN 221 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 G I+SI +TL + + ++Y+ G E ++ P+++ +Q + + Sbjct: 222 DTLGHFTGDKLIQSISQTLSSIQHKKVQIYRYGGDEFSVLFHSPKSKEEVQELAQEILLA 281 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 H L + F T ++ Q + + + Sbjct: 282 FESPFHVKGNELYITASIGISYFPVIGVTYDQIIQQAEMAMHYAKELGKGD-FQWYQSSI 340 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKF 538 + +++L+ +R A++Q + LY P + + G + +L G ++P KF Sbjct: 341 RTEHDEKLLMEKRLRIAMEQENFELYYHPQIDLKENKVIGVEALLRWNDEQLGKVSPYKF 400 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ + L + VLE + R +N+ P + + ++ Sbjct: 401 IPIAEETGLINQIGDWVLEKACIQAKKWNNEGHELRIGINISPQQFQRPDFVSKVKNTLD 460 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + +SP+ + LEITE N + + + +L +FG I+IDDFGTGY++ L+R D Sbjct: 461 KTGLSPKLLDLEITENDLLYNRDECLKTLYRLKQFGVSISIDDFGTGYSSLSYLRRFPID 520 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+K++V NT D IV SI LA L V+AE VET + A L+KL +QG Sbjct: 521 TLKIDQSFIKEVVDNTNDQAIVTSIIQLAHNMKLRVIAEGVETSEMVAFLNKLSCDEMQG 580 Query: 719 YLIGRPQPLA 728 +L +P P Sbjct: 581 FLYSQPLPPE 590 >UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BRL9_DELAS Length = 881 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 121/705 (17%), Positives = 223/705 (31%), Gaps = 41/705 (5%) Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTF---------VVLCACAILRWQL 108 + W V ++ L + Q V R+ L Sbjct: 158 VRDWAQWGVVAVNGLAVSVLAETLQRSLRKANMQRQLLDSVISGTSDAVFVKDLRGRYLL 217 Query: 109 GTRWRYGLTSRYVWQRL----FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF 164 R L R + F L + + Sbjct: 218 VNRAAASLVGRQAEDIVGKDDFALFPFGIASAIRRKDQAVLRQEVATHEEQLTVEPGRTL 277 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL--SWLAA 222 ++ + + ++R I + + + + Sbjct: 278 DLLVTKGPVRNTAGHIAGLFGISRDITERKRFERELAQAAVVFDSSHQGIMVVDPGRRIT 337 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA-VSTLCLLNYNQNF 281 T Y ++ + G V G F WA + + Sbjct: 338 RVNPAFTRITGYASEDVIGKTPRVL------SSGLHGPEFYRQIWACIERDGFWHGEIWN 391 Query: 282 LQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + ++ ++ + + + D LT LPN R Sbjct: 392 RRKTGEIFAEMLSISAAQGAGGEIEHYIGVFTDISHIKAHEAELERVTHYDLLTGLPNRR 451 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L + + C L +D + ++ +G + + L +++ Sbjct: 452 LLIDRLNQAMLRTAREGRSLAVCFLDLDGFKEINDLHGAAAGDALLVGVAAHLKSVLRSE 511 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + L +L G E +L+LS + +++ + SR + + L + + + Sbjct: 512 DTLARLGGDEFVLLLSHIGSAEHCATILDRVLEAASRPVPVQDRVLSVTASLGVSLYPDD 571 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 Q LL + + + + L L +R AL++G+ LL+ Sbjct: 572 QADPDLLLRHADQAMCVAKQAGRNR-YQLFDPENDRKAHARRLQLGWLRQALEKGEFLLH 630 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP G + +L G+ P +FLP +A +L V+ + A Sbjct: 631 YQPKVELGGGRLVGAEALLRWHDPRQGLRAPGEFLPFVAGSDLERPLGDWVIGEAVAQAA 690 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESS 623 S+N+ LL ++ ++ R+ + P + LEI E A ++ E + Sbjct: 691 RWFGQGLDLCVSINVSANQLLDGGFHAKMAQVLARHPDLPPHLIELEILESAAIADMEQA 750 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + Q + G R A+DDFGTGY++ L++L +KID FV+D++ + D IV + Sbjct: 751 IQVMGQCRQLGIRFALDDFGTGYSSLTYLRKLPVQSLKIDQSFVRDMLADPDDLGIVEGV 810 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA L VAE VET + L +G QGY I RP P Sbjct: 811 IQLASTFQLESVAEGVETPKHARRLRDMGCHVAQGYGIARPMPAD 855 >UniRef50_C5T452 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T452_ACIDE Length = 1051 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 106/585 (18%), Positives = 197/585 (33%), Gaps = 61/585 (10%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVP 245 ++ ++ A G E R ++ + V L+ I GY Sbjct: 466 IAVVQDISARKQMEASLRGNELRQRSILQRLPVGVCLVQDDGRMTFRNARFVEICGYSQD 525 Query: 246 VFFIIFTLGVGKLRYP-----------FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 P + + + + + + Sbjct: 526 DLPTSEDWWRAVYPDPEYRERTRAAWAAACASAREGSGTIASGEYTIRCKNGQQRVVEIA 585 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 + L + + + A DPLT LPN R L Sbjct: 586 GVTMDD---GHLVTMVDLSQRKADEEEIRYLAFYDPLTRLPNRRLLMDRLQQALATSARH 642 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + L +DN + ++ G ++ + + L + E++ + + G E ++VL Sbjct: 643 QRSGALLLLDLDNFKTLNETRGHERGDLLLQQVAQRLRQCVHEDDTVARPGGDEFVVVLE 702 Query: 407 GPET--EGRLQH---MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 E + + + + F G +ET+ LL + Sbjct: 703 DLGDNPEEAAARSEEIGQKILAALREPYQLDAEVHHSSLSMGITIFSGMRETVDELLKRA 762 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKEGE 517 Q+ L + + + + + +R L QG LY QP + Sbjct: 763 DLAMYQAKGAGRD-TLRFYDPRMQAAVSARAAMELDMRVGLAQGQFELYYQPQIEHGRIT 821 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRF 575 G + +L G ++P +F+P+ + L VL++ + LA Sbjct: 822 GAEALLRWRHPQQGFISPAQFIPMAEESGLILPLGEWVLQAACRRLAQWSQQPGLAELDL 881 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS-----------NAESSM 624 +VN+ P Q +++ + E ++ Sbjct: 882 AVNVSPRQFHQGGFVPQVLAALAGSGADGHR-----------LKLELTEGLLLEDVEDTI 930 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + QL +G ++DDFGTGY++ LKRL D +KID FV+D++T+ DA I R++ Sbjct: 931 EKMGQLRGYGVGFSLDDFGTGYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIARTVV 990 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA + L V+AE VET+ Q+ L + QG+L+ P +A+ Sbjct: 991 ALATSLGLRVIAEGVETEAQREFLARSHCHAWQGFLLSPPLAVAE 1035 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 15/168 (8%), Positives = 45/168 (26%), Gaps = 13/168 (7%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 L+ T ++ +L + + A + E+R + AA+ V + Sbjct: 316 WLAGTTGAVVTLLLAALVVLLGRQRTRALKHAQVSDDARRQSEERFRAVFNQAAVGVAQI 375 Query: 229 ------LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST----LCLLNYN 278 + + I GY V + + +L + + Sbjct: 376 DTQTGRFVRVNQKYGDIVGYTVEQMGQLSFQAISHPADLVEDLARMERLKAGEITEYHME 435 Query: 279 QNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + ++ + + + +V+ + + Sbjct: 436 KRYFHRDGHTLWVDLAVSAMWAPGAQPDYHIAVVQDISARKQMEASLR 483 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 89/535 (16%), Positives = 180/535 (33%), Gaps = 32/535 (5%) Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL----GVGKLRYPFLNLTWAVSTL 272 L +V++ P F + G R + A++ Sbjct: 11 LLDSINDAVIIADGDGNP------LRSNPAFETLMGFTSKGGAEVSRLAAGMIYRAINPG 64 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + E A + + L +VR E D Sbjct: 65 AGGRWRGLVTCPDGRERPFEVTAAAINPSTDSADRYLCVVRPAIAEEAGAAGGSF--GYD 122 Query: 330 PLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN A + + +D ++ G + + R Sbjct: 123 TLTGLPNRDLFGDRIGQAVLQANRTGASVALMTMGLDRFTLVNDALGHGAGDRLLMEVAR 182 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYG 438 L ++E + +L G + LV++ + + + + + Sbjct: 183 RLKMCVRETDTAVRLDGDKFALVMA-IADTDDSVIVAEKALNAVKEPFALDGQEVVVTFS 241 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + ++ L+ + + ++ + ++ L +R A Sbjct: 242 IGISVYPLDADSSAQLVKHAENALHYAKVSGRNQ-YQFFSKDMNRKAKSRLELEGRMRRA 300 Query: 499 LDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L + +++ QP + G + ++ + + G++ P +F+P+ + V Sbjct: 301 LANQEFVVFYQPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQIEPIGTWV 360 Query: 556 LESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + SVN+ ++ + + + P+ + LEITE Sbjct: 361 LRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLELEITES 420 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 ++ ++++ ++ L G ++IDDFGTGY++ L R +KID F+ D+ TN Sbjct: 421 MLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADVDTNP 480 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A I R+I L++ +L VVAE E + L G +QG+ RP P + Sbjct: 481 KTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADE 535 >UniRef50_A4VMP6 Sensory box protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VMP6_PSEU5 Length = 855 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 98/564 (17%), Positives = 198/564 (35%), Gaps = 24/564 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + R++ + + E+R ++ A+ + + Sbjct: 285 HALRVMHLLDVSYARLASSRSALAESEERFRDVAEAASDWIWETDEQARLTF-LSNRFRQ 343 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ----NFLQGVETEYSLAFILAVL-- 298 L + + A+ ++ ++ E + Sbjct: 344 ITGHEPAQWLGRPLLELLITDSAALQNWLEAPHSAPLRSSYRAADGCERYCRLAARTIQH 403 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKS 351 + R + D LT LPN L EQ + + Sbjct: 404 DGKLLGYRGTASDVTEETRAQARVQYLSQHDALTGLPNRSRLRDYLEQNLASLRSGSTLT 463 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + + L ++ + + +L G E ++VL + Sbjct: 464 LLYIDLDRFKPVNDTLGHAAGDEVLIGVASRLRERTRDGDLVARLGGDEFVVVLHRMGED 523 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + N + S + + + +G + LL Q+ Sbjct: 524 NDIDRLCNRIIDALSAPFIYEDQQISIGASIGVALAPTDANQANELLRCADIALYQAKDA 583 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILAR 525 + + + +++ +R A+ + L ++ QP + G + ++ Sbjct: 584 GRG-TWRAYGREMDQRLHERLRREEELRVAITEQQLEVHYQPRYQSQGLYIIGAEALVRW 642 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 G++ P++F+PL + L VL + A P SVNL PL L Sbjct: 643 DHPQRGMLLPEQFIPLAEETGLIIPLGRWVLRQACQQAARWPG---DTVVSVNLSPLQLH 699 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + I + ++ + LE+TE ++++ ++++ G R+A+DDFGTG Sbjct: 700 DDRLLEEITQALADNGLAGNRLELEVTESALLRETQNTLELLKRIKALGVRLAVDDFGTG 759 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L+ D+IKID FV I + D IVR++ +L + + V AE VET++Q Sbjct: 760 YSSLTTLRHYPFDVIKIDNSFVAGIGQSIEDHSIVRALIELGRGLRMRVTAEGVETEEQL 819 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 LL G +QG+ + P P D Sbjct: 820 RLLTDDGCTEVQGFHMSHPLPAQD 843 >UniRef50_B7KTR4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Methylobacterium extorquens group RepID=B7KTR4_METC4 Length = 1003 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 105/560 (18%), Positives = 201/560 (35%), Gaps = 32/560 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFI-- 249 R+ A E +L A + V L + GY + Sbjct: 438 LTASRQSEAALRSAEADYQSLFQNAVIGVYRARLDGGIVQANRALARLHGYGDADLSLPE 497 Query: 250 ---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI---LAVLISFSV 303 + R+ ++ ++ + + Sbjct: 498 GGFSHDWYIEPGRHEAFLACLEREGHVEDFVSEVRRHAGGERIWVSETAWVVRDAAGRPI 557 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 V + A D LT LPN R ++ C Sbjct: 558 WFEGTVADATERKRAQALIEHMARHDALTGLPNRRLFQETLAREIDGARRDGGSVVVLCC 617 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ +G +R I L ++E + + +L G E ++L + R+ Sbjct: 618 DLDRFKAVNDTFGHPAGDALLRVIAGRLRATLREGDVVARLGGDEFAIILPSRGKQRRIA 677 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 L R + +G + + ++ L ++ Sbjct: 678 AFARRLIQAAGRPVDLGGRATTVGVSIGVAVWPKHGDSADTLFKNADIALYRAKDSGRN- 736 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 E ++ + LL +R ++ G L+ QPI + +G++ +L Sbjct: 737 TFRFYESGMALAVVTRNLLEIEMRESIRSGGFALHYQPIFALADGAPQGFEALLRWNHPL 796 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G ++P F+PL + L + L + A+ P R +VN+ + + + Sbjct: 797 RGPISPGAFIPLAEESGLITQLGAWALHEACREAASWPG---DLRVAVNVSAVQFRKTGL 853 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++R + + LEITE ++++ + ++ +L G RIA+DDFGTGY++ Sbjct: 854 EQSVMRALAASGLPAGRLELEITESVLMQDSDAVIGSLHRLRAMGVRIALDDFGTGYSSL 913 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L R D IKID F++DI + A +VR++ L + +++ AE VET++Q + Sbjct: 914 SYLCRFPFDKIKIDRAFIRDIDE-PVAAAVVRAVVGLGERLGMAITAEGVETEEQLVQVR 972 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G +QG+L+GRP P A+ Sbjct: 973 RKGCTEVQGFLLGRPLPAAE 992 Score = 41.9 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 18/212 (8%), Positives = 36/212 (16%), Gaps = 11/212 (5%) Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 R + + + L +S+ +V L Sbjct: 112 ARFYAGLAIRSGAGRVVGTLCLMDRVPRDDVSSDRVRVLQELALVAEAHLELDEARRASE 171 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYEN 236 R + R A E+ A W + Sbjct: 172 AAERRRAEAHLLEWEARQRALEAAHAMAEQIAAFGHWRIDAGTRTIAWSDGIARIFGRNA 231 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN--FLQGVETEYSLAFI 294 + L ++ S Y L+ +A Sbjct: 232 ERATLPLETHIGFYHPDDRERVWAAMDEALAGRSRTLGGGYEHRSRILRPDGEIRVVAVH 291 Query: 295 LAVLISFSVCLLYMV---RIYHRSEWLNRRWH 323 + L+ + +R Sbjct: 292 GIGEHDEAGRLVSIFGVCLDVTGMARSEQRLR 323 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 611 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 102/444 (22%), Positives = 181/444 (40%), Gaps = 30/444 (6%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + Q D LT LPN EQ +A + L +DN + + Sbjct: 199 ITERQSKE--LVHQYSHDLLTNLPNRILFVDRLEQSIGRRASRDAHLAVILLDLDNFKRV 256 Query: 364 SRHYGLMMRVHCIRSICRTLLPLM------------QENEKLYQLPGSELLLVLSGPETE 411 + G I+ + L + + L +L G E ++L ++ Sbjct: 257 NDSLGHKSGDLLIKQLGEDLRKVFLGNELARRYGIEASSITLSRLGGDEFGIILDEVDSL 316 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + +V L SR+ + + F + + L+ + Sbjct: 317 DLVVRIVQHLIEVISREHDIEGHQVFLTCSVGISVFPYDGDDADTLIKNADAAMYDAKQR 376 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + + ++ QT +Q++L N + AL + + ++ QP + + G + ++ Sbjct: 377 GRN-SFQFYTKDINSQTYRQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRW 435 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 + G+ P F+ + + + VL+ + + + D R S+NL Sbjct: 436 RHPEKGLQPPANFIAIAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQF 495 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q ++ + + I+P + LE+TE + + ++ + QL+ G R+AIDDFGT Sbjct: 496 RQSDLVEQCRNTIRSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGT 555 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK D +KID FV+DI + D IV +I LAK+ L VVAE VET++Q Sbjct: 556 GYSSLNNLKHFPIDTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQ 615 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L +LG + +QGY RP P Sbjct: 616 LGFLKRLGCEIVQGYFFSRPLPFE 639 >UniRef50_D1U5D9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5D9_9DELT Length = 711 Score = 611 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 101/570 (17%), Positives = 210/570 (36%), Gaps = 35/570 (6%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLS-----WLAALSVLLLLLCTPYENDFIAGYLVP 245 L E+R ++ W + + + + I GY Sbjct: 137 RRLEKVVAELEASREALLNSEQRYRMVADYNYDWESWIGPDGKAIYISPSCERITGYPPD 196 Query: 246 VFFIIFTLGVGKLRYPFLNL----TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 F L + +++ S+ + ++ I + Sbjct: 197 RFIEDPDLMQRIVHRDDIHIWHNYMADTSSGDDDGLDYRIHHRNARTKWVSLIKHAVADE 256 Query: 302 SVCLLYM---VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + L + VR + + ++ +L DPLT LPN L + Sbjct: 257 AGNPLGVRVSVRDVTHRKRMEQQLKHSSLHDPLTGLPNRALLLDRLSQAVERSARTDDYF 316 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + +D + ++ H+G +M + I L +++ + + + G + ++++ Sbjct: 317 GVLFINLDRFQAVNDHFGHVMGDRLLVEIGVRLSRVVRPVDSVARFGGDDFVVLIEEMPR 376 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAA--WGRFDGNQETLQPLLGQLSWLAEQS 465 + ++ MV I+ N T + R + + L+ ++ Sbjct: 377 KIDMRDMVRIIRDSFKEPFEVNGTDFPITASMGLEIARA---ESDPESLVHNAQLAMYKA 433 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 + + + + N ++ AL + + QPI + + G++ + Sbjct: 434 KESGKDR-YLVYDARMREGVVNVLAVENDLKRALRAHEFEAHFQPIVNLSDGQLYGFEAL 492 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNL 579 G+++P +F+P+ + L +LE L+ +VN+ Sbjct: 493 ARWNHPQRGLVSPGEFIPVAEETGLIVELGAHILEYACTTLSQWRSRYPGAGNLVMAVNI 552 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + + + + R + P + LEITE +A S + L G ++++ Sbjct: 553 SAKQFGEAKLVTSVKDILARSGLPPGLLKLEITETVVMLDAMESSVRLNLLKSLGVKLSV 612 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L++ D +KID FV+ + + I+R+I ++A + L VVAE + Sbjct: 613 DDFGTGYSSMSYLQKFPVDQLKIDLSFVRLMEKGPENIEIIRAIVNMAHSLRLRVVAEGI 672 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET++Q+ LL+ L Y QGYL +P P + Sbjct: 673 ETERQRDLLYSLQCDYGQGYLYSKPLPRDE 702 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 611 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 88/431 (20%), Positives = 176/431 (40%), Gaps = 20/431 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 R L + QA D LT LPN + A + + +D + ++ Sbjct: 415 RHHQLTAQLRHQAQHDALTGLPNRSLFTERLAEILEQSERSRASTALLFVDLDEFKGVND 474 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + ++++ LL + + + ++ G E LVL E + + + + Sbjct: 475 TVGHHVGDYVLQAVADRLLGCARRGDVVARVGGDEFTLVLPFAEEPHAIT-VARRVLNEL 533 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 +G Q LL ++ E ++ Sbjct: 534 TRPFVVQGRAFHLGASIGISVSPQAGRDGQTLLRHADLAMYRAKRE--KSGFAVFEAQLN 591 Query: 483 GQTTKQVLLLNTIRTALDQ--GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 Q ++ L + +R AL + +L L+ QP + + G + ++ G+++P + Sbjct: 592 QQAQLRLQLASDLREALREPGANLELHYQPQVRLHDGQVVGAEALVRWRHPHLGMVSPAQ 651 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + V+E + G R +VN+ L + + + Sbjct: 652 FIPVAEDTGMIVPLGTWVMEEACRQAVAWAAAGHGAMRVAVNVSALQFARPDFVDTVSAT 711 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + + +E+TE + + S+ +E+L G +A+DDFGTGY++ L+RL Sbjct: 712 LRATGLEAGRLEVELTESAVMEDVKESVERMERLRALGVSVAVDDFGTGYSSLSYLQRLP 771 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +++KID F++++ N +V++I LA+ +L VAE VET ++ L ++G +Y Sbjct: 772 LNVLKIDRTFIQNLGVNATSRSVVQAIVGLAQHLNLECVAEGVETPDEREALIEVGCRYA 831 Query: 717 QGYLIGRPQPL 727 QG+ +P P Sbjct: 832 QGFFFAKPLPA 842 >UniRef50_B1KF16 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KF16_SHEWM Length = 583 Score = 611 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 106/570 (18%), Positives = 197/570 (34%), Gaps = 28/570 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 +L R+I ++ + + L+ + + + Sbjct: 13 LLSQAQNRLIEHLQASEKRYEDLVGHLRDVVFHLDLALKWTFLNQAWHGMSGYSIENSLG 72 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 Y T L L ++ F + + Sbjct: 73 KYFAENLSSQDTQKCTAGFQALLT-----KQLTEMSEEITFNTADNDKRIFELSCRAVKD 127 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKS 351 + ++ + A D LT + N R L + Q + Sbjct: 128 ETGQFAGFAGIITDITERIVAENKITFMAYHDALTGVANRRLLMEHLAQELTKPCGHCSA 187 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLSGPET 410 + +DN + ++ HYG + + + L Q E + + ++ G E +L LS Sbjct: 188 LLYIDLDNFKQVNDHYGHTVGDLLLCEVSDVLSEYAQDEEDLVARMGGDEFILFLSNLGE 247 Query: 411 EGRLQ-----HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 L + + S + + + D + + Sbjct: 248 NSALVTQKLVQITEKIRVQLSEPVLLGKLKIQITSSIGVVTLDHATMSHSDIFKYADAAL 307 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGY 519 S + +E + ++ L + + A+ + LLY QP + E Sbjct: 308 YHSKNTGKNQ-VRFYDEELEQSERRRHQLEDELSQAITNEEFLLYYQPQVDAEGTTILKA 366 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVN 578 + +L GI+ PD+F+P + ++ L +LE + L K S+N Sbjct: 367 EVLLRWQHPRHGIVNPDEFIPHLEEYGLIIPVGKWILEESCRQLKVWHNAGKHELCLSIN 426 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + I ++ IS + + LE+TE A + S++ +++L + G RIA Sbjct: 427 VSANQFKHPDFIEFIEICLIKHQISGEQIELELTEGVAIHDIPSTIKKMDRLQELGIRIA 486 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LK L + +KID FV+ + + DA IV + +A L+VVAE Sbjct: 487 LDDFGTGYSSLSYLKHLPINTLKIDQSFVQGLPHDGYDAAIVETTMVMAHHLGLTVVAEG 546 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VE + Q A L K QG+L +P + Sbjct: 547 VENRVQLAFLKKQQCHLYQGFLFSQPLNVD 576 >UniRef50_Q7NXK6 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NXK6_CHRVO Length = 816 Score = 611 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 111/574 (19%), Positives = 211/574 (36%), Gaps = 24/574 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW------LAALSVLLLLLCT 232 F L + A+ R + + T Sbjct: 238 GQPGFLMLITDVTERKRAEQALRDEKERIRITLNSIGDAVIATDANGNITFLNPIAEDMT 297 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 +++ G V + G + + L + + N + L Sbjct: 298 GWQSREALGEPVEKIMPLRESSQGHAMFNPIRLVLSEQRSVGMAMNCALQRRDGQLLELE 357 Query: 293 FILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--- 346 + ++ + L + + + + + A D LT LPN L+ +Q Sbjct: 358 DSASPILDHAGKLTGAIIVFHDVSEARAMAVKMTHLAHHDALTNLPNRMLLQDRTQQALQ 417 Query: 347 -----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 L ID+ + ++ G + ++ + R L ++ + + + G E Sbjct: 418 QAAHSGDRLGLYILDIDHFKVINDSMGHSVGDQLLQRVARRLQAALRPCDTVSRQGGDEF 477 Query: 402 LLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++++ G + M + + S + D+ G + + + + L Sbjct: 478 IILVPGLGGIEQAGAMADKMLKAISEPYLLDGNRYDLSGSIGVGIYPDDSKNQEELYRHA 537 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG 518 ++ + + L IR +QG L+Y QP + G G Sbjct: 538 DAAMYRAKQEGRNR-YRFFSSEIEEALLTRQALERHIRMGAEQGGFLVYYQPKVDAGGGG 596 Query: 519 ---YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF 575 + +L I++P F+PL + L L VL + R Sbjct: 597 VVGLEALLRWRNDKDEIVSPSHFIPLAEETGLIVPLGLFVLRQACLDGKRWLDAGRRLRI 656 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ + +++ + + R+ K + + + LEITE + E +M + +L G Sbjct: 657 AVNVSAVQVMESDFCDAVRRVLKETGLPTELLELEITEGVLAQDVERTMSVLAELKSLGV 716 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 IAIDDFGTGY++ LK D++KID F+ D++ + A IV +I +A+ L +V Sbjct: 717 SIAIDDFGTGYSSLSYLKLFPLDVLKIDQSFIHDMLDDRHSAAIVAAIASMAQGMGLRLV 776 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VE ++Q L +LG + +QG+L GRP+P A+ Sbjct: 777 AEGVEREEQARELLRLGCRIMQGFLYGRPEPAAE 810 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 611 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 92/425 (21%), Positives = 172/425 (40%), Gaps = 15/425 (3%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 R A DPLT + N L++ + + L +DN + ++ Sbjct: 319 RHRAEARIGFLADHDPLTGMANRALLDRKLTFAMQTADSTRSEVALAFLDLDNFKLVNDS 378 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM--VNILNSR 424 G + ++ + + L + L ++ G E +++L + E L + + +R Sbjct: 379 LGHSVGDQLLKIVASRISELTSDQGSLARIGGDEFVIILEQMDLESCLDRLSAIREAVTR 438 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 I N+ L + + + T LL ++ + ++ Sbjct: 439 PIVLNDIELRVTCSIGVASYPSHGSTAGELLASADMAMYRAKELGRD-GIALFTSAMTAI 497 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 K++ + +R AL + + +L+ QP + + ++ G++ P F+ L Sbjct: 498 VRKKLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGLVYPGDFIAL 557 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +L VL++ + + R SVN+ +K + + Sbjct: 558 AEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIETVATALSES 617 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P + LEITE + S+ +++L G ++A+DDFGTGY++ LKR + Sbjct: 618 GLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSALKRFPLSRL 677 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+ DI + D I +I LA+ L V+AE VET++Q L + G +QGYL Sbjct: 678 KIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESGCNEIQGYL 737 Query: 721 IGRPQ 725 RP Sbjct: 738 FSRPV 742 >UniRef50_C3KQA4 Putative uncharacterized protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KQA4_RHISN Length = 1105 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 97/587 (16%), Positives = 202/587 (34%), Gaps = 35/587 (5%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + + + + R I A+ + +R + SV++ Sbjct: 486 VITAPVLGAFGEPIRMLAIWRDITEARKARDDAEAARLHAERLAERLSGVLESTMDSVVV 545 Query: 228 LLLCTPYENDFIAGYLVPVFFI------IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + +++ + + + + + + + + + Sbjct: 546 A--DRDWRIEYLNSKAMRLLQVDEQAVGLDLWRLFPVNDSSVFAVEYRKVMSEHSSTTFE 603 Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR-------RWHLQALTDPLTLL 334 E L A R + + H A D +T L Sbjct: 604 AYLEGLERWLEVHAAPTFEGISLF---FRDITERHKAEQERLLAHRQIHHMARHDAVTGL 660 Query: 335 PNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 PN + L +A E+ + + L +D + ++ YG +RS+ L + Sbjct: 661 PNRQFLREAFERLFEGTRARSKTAVLSLDLDGFKAVNDAYGHPTGDLLLRSVAERLRRCV 720 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRF 444 + + + +L G E +++ +G E + + + D+G Sbjct: 721 EGGDTVARLGGDEFVILRTGVRQEEEAIDLSQRIIDALGAPYELDGVQADIGVRVGIAFS 780 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + L+ ++ A + E + + + +R AL +L Sbjct: 781 PRDGRAADQLIKAADIALYRAKARGRGTYIQ-FEPGMDAHLQARQQMKVELRRALANDEL 839 Query: 505 LLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L+ QP+ N + ++ + G ++P F+PL + L +L Sbjct: 840 ELHYQPLVNLRTGLIATCEALVRWNHPEKGAISPVDFIPLAEETGLIVPLGEWILRRACA 899 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 P +VNL PL + + + K + + +E+TE ++ Sbjct: 900 EAVQWPQQ---VSVAVNLSPLQFRSRRLVSVVRDTLKESGLDASRLQIEVTESVLLDESD 956 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 +++ ++ + + G +IA+DDFGTGY++ L+ D IK+D F+ D+ T I+R Sbjct: 957 NNLRVLQDIRRLGVKIAMDDFGTGYSSLGYLRTFAFDKIKVDRGFISDLPTGKESLAIIR 1016 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + + ++ E VETQ Q ++H G QGYL RP A Sbjct: 1017 AVAGIGRTLGITTAVEGVETQTQLDVIHAEGFDEAQGYLFARPLTAA 1063 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 8/131 (6%), Positives = 30/131 (22%), Gaps = 11/131 (8%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLL--LCTPYENDFIAGYLVPVFFIIFTLGVGK 257 R+ + E R ++ A + + + + Y++ + G Sbjct: 259 RRKALEALKESEARFRAIADDAPVMIWVADENGASVYQSRVWLETTGQIAEQAQGFGWLD 318 Query: 258 LRYPFLNL------TWAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLYM 308 +P + A+ + + + + + + + + Sbjct: 319 AIHPDDRIDAEAAFNEALRLRTPVRTEYRLRRVDGSYAWVIDVGQPRFATDGGFLGYVGV 378 Query: 309 VRIYHRSEWLN 319 Sbjct: 379 GLDITERRQAE 389 >UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=14 Tax=Rhizobium/Agrobacterium group RepID=B5ZWQ7_RHILW Length = 794 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 113/738 (15%), Positives = 244/738 (33%), Gaps = 48/738 (6%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR-G 63 ++ F + + P++ + ++ + + R Sbjct: 53 SGFAFGTGVWATHFIAMLAYDGGT----PISYALDLTLLSFFLSVGGSWVAILAASQREA 108 Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 G L + + + A + G + +++ Sbjct: 109 RFSSTRGGALMALGIASMHLTGMQAIETQAVILYDSAMTLTAVVAG--MLLSSAAFHLFF 166 Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 L + + + + + F I+ A+ T+V + A+++ Sbjct: 167 NLKGMRRLLSASLVFVLAICTLHFMSMGSITLVPDPGKAVPTLVLDTRVLAAIVVVAATA 226 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW-LAALSVLLLLLCTPYENDFIAGY 242 L + + F Q + ++ L + ++ ++G Sbjct: 227 LILVAL--AVVFVQSHLTDLRGLANASQEGLLILREGRIIDVNERFQALSGWKLADLSG- 283 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--IS 300 + P LT + E ++ + + Sbjct: 284 ----------------KAPSDVLTAIQAPRENRPGETLLNTRTGREIAVDVNSSRIVYRG 327 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------F 352 +L + R + A D LT LPN + Q + Sbjct: 328 RDCEVLAV-RDLTERKQAEEMIEHLAHHDVLTDLPNRSLFDTRIRQALQVAERKNTEVAL 386 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 CL +D + ++ +G +R + L + E++ + +L G E ++ S + Sbjct: 387 FCLDLDRFKAVNDIFGHAEGDRILRKVAAILRRVAGESDTIARLGGDEFAIIQSDGQQPA 446 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 Q + + ++ +G + + T + L + Sbjct: 447 SAQKLAADIIDEFAAEMDTARDPTAVGVSLGIALYPRDGSTAEELCNNADTALYRVKHDG 506 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARL 526 A + + + + + +R A+ + L + QPI N + GY+ ++ Sbjct: 507 RGRA-CFFDAEMDEAARNRRQIESDLRHAIIRNQLHVSYQPILNAQSVEISGYEALMRWH 565 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + G+ PD F+P+ + + +L+ + A P +VN+ P+ + Sbjct: 566 RPGHGLTEPDIFIPVAEESGSIVQLGEWILQQACREAARWPQ---PLTIAVNVSPVQFML 622 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N+ R+ + ++P + LEITE + + M +++L K G I +DDFGTGY Sbjct: 623 PNLCERVEAVLDETGLAPDRLELEITEAALIRDRDRVMATLQRLRKLGVHIVMDDFGTGY 682 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+ D IK+D F + + IVR+I L + + VV E VET+ Q+ Sbjct: 683 SSLSNLRSFPFDKIKVDRSFTGVLEHDAAARSIVRAIIGLGHSLGMPVVTEGVETEMQRR 742 Query: 707 LLHKLGVQYLQGYLIGRP 724 ++ + G +QG L+G+P Sbjct: 743 IVVEEGCAQVQGLLLGKP 760 >UniRef50_Q0AMK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Maricaulis maris MCS10 RepID=Q0AMK4_MARMM Length = 809 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 119/753 (15%), Positives = 244/753 (32%), Gaps = 56/753 (7%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFI-FG 60 + + I+ F + S + I + + L +++S F Sbjct: 50 LLFAGFVTGTGIWGTHFVSMLAYE------SVVPIAFGLLETVISLALAIIVSACGWAFA 103 Query: 61 WRG--VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT- 117 R G + F+ M + F I L ++ + Sbjct: 104 IRSETRFAAPIGGALVGGGIAAMHFMGIEAMRTNAIFTWDAGLIIAAIVLAIQFSAAAST 163 Query: 118 ---SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 + + L L+ G+ ++ ++ + + Sbjct: 164 VAMGKSLKPSLIGGTLLLVCGVVSLHFISMGAMQLVPDMTVAEPE-----------GGLS 212 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 L+ + + ++ + + + R L+ + ++ Y Sbjct: 213 PKLLAVTVALGVVFVVSVGLATAAIDLHLGKRRMAEGARMRALAEATFEGIAVVRDGQMY 272 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ----NFLQGVETEYS 290 + + G + + VG + L L + + Sbjct: 273 D---MNGRFCEMLNLAREDLVGTPIMKLAVDPEDIRVLQLDQDDAPTTCRLRCRDRAPIT 329 Query: 291 LAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---- 345 + V+ ++ R E R A D LT LPN +A E Sbjct: 330 VQVRARVMDFDGQSSRIFTFRDVSSEERARARITHLAHHDTLTGLPNRLKFREALEAELS 389 Query: 346 ----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 ++ + +D + ++ +G + ++ LL + N +L G E Sbjct: 390 SAWDNDSQVALMFFDLDRFKEVNDVHGHATGDRLLVAVSERLLDALPRNAVAARLSGDEF 449 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++L ++ + + + + + L + F + E L+ Q Sbjct: 450 AVILPDVDSREDGLNTARRVVNNVGSPLSIGSLHLKVSASGGVTMFPLDGEDPDRLMNQA 509 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 ++ + + + ++ +L + A++ L L QP + Sbjct: 510 DLALYRAKGQGRNQ-VCDFDPKLGMMMQERRMLEADLALAIEDDLLTLNYQPQVRLGDGS 568 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF 575 G++ ++ G + P +F+ + + L + VLE+ + P R Sbjct: 569 IAGFEALVRWHDDRRGAVAPAEFVQIAEETGLILKMGEWVLETACREAVNWPN---DRRV 625 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ P Q N+ + R + P + +EITE + ++ + L G Sbjct: 626 AVNVSPAQFKQGNLVYSVQRALTNSGLDPARLEIEITEGVLIDDEARALKVLRGLKDLGV 685 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +AIDDFGTGY++ L+ D IKID F+ + + +IVR+ LA+ +++VV Sbjct: 686 GLAIDDFGTGYSSLSYLRAFPFDKIKIDRSFITGLQNDQEAQIIVRATIALARDLNIAVV 745 Query: 696 AEFVETQQQQALLHKLGVQ---YLQGYLIGRPQ 725 E VE + L LG Q LQGYL+ RP Sbjct: 746 VEGVE---EFDELGALGYQPDLVLQGYLLSRPL 775 >UniRef50_Q8DKE8 Tlr0911 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DKE8_THEEB Length = 1240 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 107/564 (18%), Positives = 196/564 (34%), Gaps = 26/564 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 I L + E + L L + AG + Sbjct: 675 IHRAELVSALHQEKERYRRVLEAQTELLYRCTPEGHLTFGNPAFFRYLAEAGMNCDFGDV 734 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVLISFSVC---L 305 I + F A+S ++ + Sbjct: 735 IRHPFDPVTQQRFQQHLQALSPAQPISTIECAVTLSGGQLAWFEWTTRAFFDHHGRCVEY 794 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLR 356 + R + + + AL D LT LPN L++ ++ + + Sbjct: 795 QCVGRDITCRKQMEEQLIHDALHDALTGLPNRTLLQERLKHCWRQYQRRRDRPFAVVFID 854 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 ID + ++ G + ++ + + ++++ + L +L G E +++ + + + Sbjct: 855 IDRFKRVNDSLGHQAGDQLLITLAQRMQTVVRQGDTLARLSGDEFVVLCEDLDPQQMVAQ 914 Query: 417 M------VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + + L + D + LL Q+ Sbjct: 915 VQAQVTDLERVIQEPLIIDGHLLSVSASIGVAFSDREATSAATLLRDADIAMYQAKKQGL 974 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + Q L + + A+ +L +Y QPI G + + Sbjct: 975 GQ-WCIFDPQMHTQAQSCFTLESQLHQAIANSELQVYFQPIVEMKTGAIVGLEALSRWFD 1033 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTL 584 + G ++P +F+ L Q L QVLE ++ + +N+ P L Sbjct: 1034 PEKGEISPSEFITLAEQAGLIVSLGRQVLERAIQEFSQWRQQDSRRQTMTLGINISPQQL 1093 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + N I+ +R + P + LEITE N E+++ E+L + G + IDDFGT Sbjct: 1094 VDANFVSDILAALRRAQLPPHLLHLEITETTMIRNLEATLQVAEELQQLGVALNIDDFGT 1153 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ RL +L +KID FV+ + + I+ ++ L K+ L VVAE VET Q Sbjct: 1154 GYSSLSRLHQLPIHALKIDRSFVQSLEESQAAQEIIGAVIALGKSLRLDVVAEGVETAVQ 1213 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 A L LG Y QGY P P+ Sbjct: 1214 AAQLMDLGCLYGQGYFFYPPLPID 1237 >UniRef50_A6EZP7 Two-component response regulator n=4 Tax=Marinobacter RepID=A6EZP7_9ALTE Length = 858 Score = 610 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 107/591 (18%), Positives = 207/591 (35%), Gaps = 31/591 (5%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 V + + ++ Y L R I + Sbjct: 263 PYFLEVTNFPVIIQGEIVGV---YGLCRDISDRKHQDADLHLLKRGIEANPNGMLMVDAR 319 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 + ++ + GY F G + + +N Sbjct: 320 SPDMPVVY---ANPAFTEMTGYSYDEVMGSNCRFLQGEETALEALETIRQGLHHQTEVNV 376 Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + T + ++ + + + + QA D LT L Sbjct: 377 ELINYRKDGTPFWNHLRISPVFGNDGLCTHFIGTQQDVTHQREQEAQITYQATHDLLTGL 436 Query: 335 PNFRALEQAPEQEA-------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 PN + ++ + L +D + ++ G + + +I R L L Sbjct: 437 PNGVSFQETLHDALILDGGRGALAVLYLDLDGFKPINDELGHHVGNQVLITIARRLADLT 496 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR- 443 + +L G E L+L G + + + ++ I + + + Sbjct: 497 APEATVARLVGDEFGLLLPGYTNRKEVTQLAERILVHLAKPIDVDGQMVHISASIGIACN 556 Query: 444 -FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + LL E++ + + ++ V L + + TAL++ Sbjct: 557 SAPLDA--PHELLQFADIARERAKRQGKN-TWQWHSGLKAERSQHSVKLRHDLHTALNEN 613 Query: 503 DLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 ++ QP+ + + ++ G+++P +F+PL Q L +L+ Sbjct: 614 QFEIHYQPLVDAVTGRMRSVEALVRWKHPTRGMISPGEFIPLAEQTGQIIPLGLWILKQA 673 Query: 560 LKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 +A + +G R +VN+ L ++ + R+ + PQ + LE+TE Sbjct: 674 CIEIADFNAQRERGLRVAVNISSLQFIRGGFLDDVRRVLAETGLPPQLLELEVTESVLLD 733 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 AE + +E L G R+A+DDFGTG+++ L+ L +K+D FV+ T+ A Sbjct: 734 GAEPVIELMETLKTLGVRVALDDFGTGFSSLSYLRDLPTHKVKLDRSFVEKTTTDHRIAA 793 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV+ + +A + VVAE +ET++QQ L + LQGYL +P PLAD Sbjct: 794 IVQGVITMAHHMDMIVVAEGIETREQQDDLARRHCDILQGYLFAQPMPLAD 844 >UniRef50_A8FY98 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FY98_SHESH Length = 951 Score = 610 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 103/519 (19%), Positives = 187/519 (36%), Gaps = 22/519 (4%) Query: 232 TPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 I GY + + + + + Sbjct: 413 VNDAFSAITGYARDEVIGQNPRVLQSGRHSPEFYREMWATLQADGHWTGEIWNKRKNDEI 472 Query: 289 YSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 Y ++ ++ + + + + + A D LT LPN L Sbjct: 473 YPEMLTISAVLDATGKVQNYVALFNDITAIKEHQEQLERIAHYDTLTNLPNRTLLADRLT 532 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 +++ + L +D + ++ YG + + I R L +++ + L ++ Sbjct: 533 QSMVQVRRRKSSLAVVFLDLDKFKDVNDAYGHDVGDKLLIVISRRLKEALRDIDTLARIG 592 Query: 398 GSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E + VL E + ++ L + L + + + L Sbjct: 593 GDEFVAVLMDIEKGEDCEPVLERLLEAASGSVTVEGIMLKVSASMGVAIYPQDGIDADQL 652 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L + + + + L ++R ALDQ + +LY QP N Sbjct: 653 LRHADQAMYVAKHEGKN-CYHLFDTAQNIAMQIRHDDLQSMRKALDQSEFVLYYQPKVNM 711 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + ++ L + G++ P++FLP I +S V+++ L +A Sbjct: 712 RTGAIIGAEALIRWLSPERGLVGPNEFLPAIENHVISIEVGEWVIDTALGQIAAWQELGL 771 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVN+ L L + L + + ++P ++ +E+ E + + Sbjct: 772 DIPVSVNVSALQLQHDGFVTCLAALLEAHPEVAPSSLEIEVLETSLIDDVMQVSATMLAC 831 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G A+DDFGTGY++ L+RL A +IKID FV D++T D IV + LAK+ Sbjct: 832 IELGVTFALDDFGTGYSSLTYLRRLPASLIKIDQTFVLDMLTTPDDLAIVEGVVSLAKSF 891 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET L + G + QGY I RP D Sbjct: 892 KHKVIAEGVETIAHGTTLLQTGCELAQGYGIARPMMAKD 930 Score = 61.5 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 29/261 (11%), Positives = 67/261 (25%), Gaps = 22/261 (8%) Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFF 147 + + +VV+ +L +L G SR V L L + I S+Y F Sbjct: 12 YWVLATLWVVIIGVYLL--KLRQLRAEGAVSRTVTVLLIILAIDAFRTIVESVYFGLYFN 69 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR----MIVSPHFAQILWRRD 203 I D + ++ + L ++ + R I A + Sbjct: 70 SLYGLIPKSIADLLSQPALLIIPKLINIFAGVLVILLLIKRWVPRDIHERKEALLALHAA 129 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF----IIFTLG 254 + S+ E ++ + + ++ + + GY + I Sbjct: 130 KSASVNNENLFNSIFNGVTDACIFADSNRNIVSINQGFELMMGYGIDELEGKTASIIYES 189 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI---LAVLISFSVCLLYMVRI 311 + + + Y N+ + + L + + +R Sbjct: 190 DEEYERQGRIHFNLAAKEKVTPYEANYRHKDGSIIVGETSRIVIRTLDDQILGYVGFIRD 249 Query: 312 YHRSEWLNRRWHL----QALT 328 + + Sbjct: 250 VTDRKKATTALQESTAMLSHH 270 >UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2C3_NITSB Length = 765 Score = 610 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 112/573 (19%), Positives = 222/573 (38%), Gaps = 21/573 (3%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK-RAFTLSWLAALSVLLLLLC-TPY 234 L + + +M+ + H ++ +K + S Sbjct: 184 LELIAITRAINKMLHAIHLYIQKIKQSEMHLAEAQKIANMSSWEYIKDSDTFFCSDQLYR 243 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + + + + + A F +Y I Sbjct: 244 ILGLNMKERLDWEHFLQMIDPQEKLRFIEEIEEAYQKGLKFETVVKFYTPKGEKYLKNVI 303 Query: 295 -LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APE 345 + + S ++ + ++ A DPLT LPN + + A Sbjct: 304 KVRKKHNRSTTIIGIAIDVTEEIKAKKQVEFLAYNDPLTSLPNRVSFQDILEKLSKIAQR 363 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + L IDN +F++ YG + + I L ++ ++ ++++ G E ++++ Sbjct: 364 SKERFALIFLDIDNFKFVNDTYGHEIGDKLLIDIATILKETLRSSDLIFRIGGDEFVVLI 423 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 ET+ L ++ + +++ + N + F + + ++ L Sbjct: 424 PKVETKDSLDIVLEKIKESVAKEYRYGNINFSVSCSLGIAIFPDDSDDIETLTRYADIAM 483 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD-QGDLLLYAQPIRN---KEGEG 518 ++ +E + +R AL + +L L+ QP + + G Sbjct: 484 YEAKKSGKNR-FVFFKEEMKKYLDHLQQTTQDLRKALKKEDELTLFFQPKIDIQNNKVIG 542 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFS 576 + ++ G++TP+ F+P+ + +L + D V++ + L + + S Sbjct: 543 AEALIRWNHPQKGLLTPNVFIPVAERSDLIEKIDEFVIKKSFRHLQEWSSDKELQNIVLS 602 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +N+ + + K Y+I P + LEITE + N ++ +E + + GF+ Sbjct: 603 LNISARQFRNPKFLDFLDKNLKLYNIDPSKLELEITETLSMENVSHTVNMLEAIKQIGFQ 662 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY++ LKRL D IKID F+ DI + D I + ITD+A ++A Sbjct: 663 VALDDFGTGYSSLNYLKRLPFDTIKIDKSFIDDIDKDPEDYQITKIITDIAYTFRKEIIA 722 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+QQ+ +L L Y QGYL +P PL + Sbjct: 723 EGVETKQQERILKDLKCFYAQGYLYAKPLPLNE 755 >UniRef50_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q13PE1_BURXL Length = 728 Score = 610 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 116/562 (20%), Positives = 213/562 (37%), Gaps = 20/562 (3%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIA 240 R + + ++ RR + R ++ + +++ L P + Sbjct: 148 LRDLAALVLDKLEIRRLEMARRTSQFRFEKIAGTSPDAIICADEQGLTTFWNPAAEKLLG 207 Query: 241 GYLVPVF-FIIFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVL 298 + I + + L A +L T + ++ Sbjct: 208 YRSDEILGRSIDLIAPEQFTARLYQLAAAGESLTEGRTVEMMVRAANGTMIPVELSGSMW 267 Query: 299 I-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----APEQEAGKSFC 353 ++R R A DPLT LPN L + A +E S Sbjct: 268 REDGRPRFGAILRDITERRQNEERLLRLAHIDPLTELPNRTMLREQVELALSKEMTASVM 327 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + ++ R L + + + ++ G E ++L G Sbjct: 328 MVDLDGFKDVNDSLGHSGGDAVLVNVARRLQACARSGDTVARMGGDEFAILLPGLPDAVE 387 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + S+ + + +++G F G+ T++ LL Q+ A Sbjct: 388 AGQIADSVIAAVSQLLTIDGQPVNIGASIGIAMFPGDGLTVRELLSSADLALYQAKAEGR 447 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + T + + AL + L+ QP + G + +L Sbjct: 448 -HCRRFFSADLREEATLRRAYQGELARALAHQEFELHYQPQVRLADSTLVGAEALLRWRH 506 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G++ P FLP I L+ R ++ + A R VNL Sbjct: 507 PQKGLLGPGAFLPAIEAGLLAPRIGDWIISMACEQAAQWRSLVPDFRVGVNLFGAQFRTG 566 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++A +++ + +++ P A+ LEITE + E + + +LH+ G IA DD+GTGYA Sbjct: 567 DLADKVLAALQAFNLPPAALELEITENIILRHDEHMLGPLRELHQRGVGIAFDDYGTGYA 626 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR +KID FV+ ++ + DA I+R+I L + L V+AE VET +Q A Sbjct: 627 SLSMLKRYPLSRLKIDQTFVRAMLESPPDAAIIRAILYLGHSFGLEVIAEGVETGEQAAR 686 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L K G + QG+L G+P P + Sbjct: 687 LRKKGCETAQGFLFGKPMPAEE 708 >UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W8B7_MAGSA Length = 682 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 107/513 (20%), Positives = 196/513 (38%), Gaps = 24/513 (4%) Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + A L F ++ + + +R+ + N + + L Sbjct: 147 LVRQRAGAAIVLSGAFLLVTAVLLAAVRHLVTGPLTRLRNSLHHNASVLMRE------PL 200 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 + + V ++ + H A D LT LPN R LE Sbjct: 201 VWSSRDELGEVVH--AYNQLLTEIDQRTEDIHQLANRDLLTGLPNRRLLEDRIGHAIALA 258 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 Q + IDN + ++ G +R I + +M+ + + + G E ++ Sbjct: 259 GRQNRSIALLFADIDNFKVVNDTLGHKQGDALLRIIADRIHDIMRGMDTVARWGGDEFVI 318 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 V+ + G + L + + L +G + + + L+ Sbjct: 319 VVESLNSAGEAASVAEKLIETIGVPVQLGSNLLRVGVSVGISMYPQDGADITTLIKNADM 378 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 ++ ++ ++ + +++ + +R A+ Q L L+ QP + Sbjct: 379 ALFEAKGRGRN-TFHFFDQAMNARALRRMDIEMALRQAIPQNQLELHYQPKIASASGALA 437 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 G + ++ + G++ PD+F+PL + +L VL + + + Sbjct: 438 GVEALVRWRRPGEGLVQPDEFIPLAEESDLIVAVGEWVLNEACRQIRDWEARGFGEVAVA 497 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL P L + I R+ + + P + +E+TE E + + +L GF Sbjct: 498 VNLSPRHFLHEKDVDGIFRIVDQSGVRPDLIEVEVTESTFMHEPEKVIGYLNRLRDRGFG 557 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IAIDDFG+GY++ L+RL +KID FV DI N +A I+R+I +A A L ++A Sbjct: 558 IAIDDFGSGYSSLSYLRRLPITTLKIDRAFVMDIEHNADNAEIIRAIIAMANAMGLGLIA 617 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VE + Q L +QGY RP P AD Sbjct: 618 EGVENRHQFEFLRHADCGVVQGYYFSRPLPPAD 650 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 110/567 (19%), Positives = 200/567 (35%), Gaps = 31/567 (5%) Query: 193 PHFAQILWRRDIAPSLGKEKRAF---TLSWLAALSVLLL-----LLCTPYENDFIAGYLV 244 D S ++R+ T+ V++ +L + + G+ Sbjct: 314 RLIRISGLLSDQTASREADERSRLASTVVDNTIEGVVVTDAHSRILSVNHAFTKLLGFSE 373 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS- 300 + + + ++ + + L+ + Sbjct: 374 AEMLGKTPRMFKSGRHDKAFYDAMWASMHATGHWQGEIWNRRKNGEVFPERMSLSAVKDA 433 Query: 301 --FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + M + ++ A D LT LPN + Sbjct: 434 NDKVTHYVCMFTDISAEKAREQQLEFLAHRDTLTGLPNRSQFTRMLGEAVELSQSTNRRM 493 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + ID + ++ YG + +R + + ++ + + +L G E+ +V Sbjct: 494 AVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGALRHGDIIGRLAGDEICVVAQSICG 553 Query: 411 EGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + L + + + + + A + + T LL + Sbjct: 554 RDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICLYPDHALTADDLLQGAHAAVYGAK 613 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 A A E ++ +++ L +R AL+ G + LY QP G + +L Sbjct: 614 ARGSN-AWCFFHENMTQAARERLALEARLRRALELGHMRLYYQPQIELATGRLVGAEALL 672 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPL 582 L + G+++P +F+P+ + L VL + +VN+ Sbjct: 673 RWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQQWRAAGLPDLAIAVNVSLH 732 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L +IAG + + LEITE E ++ + +L + G R+AIDDF Sbjct: 733 QFLLTDIAGATAEALNKSGFPASLLELEITESALAEKPEEALAVLNRLRELGLRLAIDDF 792 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D++KID F++DI + D I S+ L A L V+AE VETQ Sbjct: 793 GTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSVIALGHAMGLKVLAEGVETQ 852 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q + L + G Y QGY RP P D Sbjct: 853 EQLSFLQQKGCDYFQGYFCSRPLPAED 879 >UniRef50_C6MQF9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MQF9_9DELT Length = 705 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 97/576 (16%), Positives = 208/576 (36%), Gaps = 25/576 (4%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + + + + + L R +A E+R T+ + + L + Sbjct: 115 VNYPELFRILDRVGEKLTLRRLVARQVAALRASEQRFSTIFQATPDLLSIASLQDGRLVE 174 Query: 238 FIAGYLVPVFFIIFTLGVG---------KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 +L + F + P L + + E Sbjct: 175 VNEAFLRALGFDRQEVIGRTPEELGLWLDAGEPAALLQALAEKGAVRDLEVRLKAKNGQE 234 Query: 289 YSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----- 342 + + LL + + + L + QA DPLT LPN + Sbjct: 235 LEGLVSADSIEMEGNPFLLTLFKDISERKRLEQIIKHQAQHDPLTDLPNRKLFMDFLALE 294 Query: 343 ---APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 A + + L +D+ + ++ G ++++ + L ++E++ + ++ G Sbjct: 295 LAQARRNKKSLAVLFLDLDHFKQINDTLGHAAGDLLLQAVAQRLKRCVRESDTVARIGGD 354 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +++ + +V+ + + F + E+ + LL Sbjct: 355 EFNVLMPDLAQTDDVGTVVSKIMGVFGPPFRLEGIEVQASTSLGVSMFPDDGESCEELLQ 414 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 + + + + ++ +T + + +R A+ +G+L L QP+ N Sbjct: 415 KADGAMYVAKQSDGN-SYQFYNDEINARTVSRQNMEMRLRQAVSRGELELVYQPLLNLGT 473 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 + +L + G++ P +FL + + V+ + Sbjct: 474 GRISAAEALLRWHHPERGLLFPAQFLTVAEETGAIVPIGEWVIHQACTQMKEWQEQGLDL 533 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VNL N + ++P ++ ++I E NA + ++ +L + Sbjct: 534 SLAVNLSNREFHHPNFLEMTMTALSETGLAPGSLEMDIPERAIMDNASLPVKDMLRLTEA 593 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++DDFG G ++ +R+++L +KID F++DI+T D +V ++ ++ + L Sbjct: 594 GVAFSVDDFGIGSSSLQRIRQLPIAKLKIDRSFIRDILTEPGDLDVVSAMICMSHSLKLR 653 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V A VE Q AL+ G +QG LIGRP P A+ Sbjct: 654 VNAVGVEAPGQLALMEDYGCDEVQGDLIGRPLPAAE 689 >UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=A7HQX0_PARL1 Length = 991 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 118/740 (15%), Positives = 239/740 (32%), Gaps = 49/740 (6%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL-FIFGWRGVVPVLCGM 71 IF+L+ +V ++ + A+ FL L+++ G+ + + Sbjct: 267 IFSLSPWWDLVFRTIALALFGSAVFMLERFFLESERHSATLAMVSRWLGYAVLAGIPLAF 326 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + ++ +L VV+ L Q L + Sbjct: 327 LTASGAALYVRLFLAVALLAGAPLVVMA---------------ALRGVRPAQLLIPGAAL 371 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 I S + + + F G + + R Sbjct: 372 FAIAGFFSAFHAAGWVPGTFAGTVFAGGIFTTALTLFAFAAAYHAQGG--------RRRA 423 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL-SVLLLLLCTPYENDFIAGYLVPVFFII 250 + R A S + L + + + G V + Sbjct: 424 DIGTLRSEQRHAFALSGARMGVWDWDIAGDKLYVSPSVEAMLGLDAGTLDGNEVAWREHM 483 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLY 307 R + + +A + + ++ + Sbjct: 484 HPADRETYRNALNAYIERGTV--SFTLDFRMRHSDGVFRWVALNASCVAGPENYATRCIG 541 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRID 358 VR + R ++ D LT LPN + + + +D Sbjct: 542 TVRDISAQKHAEERLMHDSVHDSLTGLPNRALFMDRMSRAIRRRGLLERPRAALLLIDLD 601 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + +I R L L+ +++ + ++ G ++L+ Sbjct: 602 RFKTVNDSLGHSGGDALLIAIARRLESLVTQDDTVARIDGDAFAVLLTTRTEREDALAFA 661 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + I + + E + L + ++ ++ Sbjct: 662 EQASEFLRQPIEVAGHEVYPTCSVGVAICEDAHEHPEELFTEAEIAMYRAKRSGKAR-IE 720 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 E + +T + L +R A+++ ++ LY QPI + G++ ++ G+ Sbjct: 721 LFEPGMRSETDDHLTLETDLRHAIERREMELYYQPIMSLTDGGVRGFEALIRWNHPKEGL 780 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNI 589 + PD F+PL + + L + + LAT SVN+ LL+ ++ Sbjct: 781 LAPDNFVPLAEELGVITEIGRFALRAASEELATWQKLFPMERALTVSVNVSSRQLLRHDL 840 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + R+ R I + LE+TE N E + + ++ G +++DDFGTGY++ Sbjct: 841 IDDVKRVLNRIDIERGTLKLEVTESLVMENPEFAASMLTRIKALGAGLSLDDFGTGYSSL 900 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+R D +K+D FV + + +I+RS+ LA + VVAE E++ Q L Sbjct: 901 SYLQRFPFDTLKVDRSFVAGMSVDRETPLIIRSMVTLAHDLGMEVVAEGTESESQARDLA 960 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 +G Y QGY G+P A+ Sbjct: 961 DMGCDYGQGYYFGQPMRAAE 980 >UniRef50_B4VXK2 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VXK2_9CYAN Length = 884 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 94/562 (16%), Positives = 203/562 (36%), Gaps = 34/562 (6%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 F + R L ++ A S+ ++ + ++ ++ Sbjct: 288 ELDFLFAIGRDQNEHCLTHQETARLASFPLLTPNPIVEIDLAGRVRYLN---PEAMRLLP 344 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRI 311 L + +PFL ++ L + + + V + + + Sbjct: 345 ELLDSEAEHPFLAEMPSMIRLMQQQSSLRREVKIGEIVYEQVLHYVPEIECIRIYAL--D 402 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG----------------KSFCCL 355 + A D LT L N +Q + L Sbjct: 403 ITDRKRAEELLLFNAFYDRLTGLANRALFMDRLQQAGRRAQPSQGENRDSPSYRFAVVLL 462 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 ++ + ++ G + ++ + L ++ + + +L G E ++L G + Sbjct: 463 NLNRFKVVNESLGNHLGDQVLQEFGQRLQNCLRPTDTVARLGGDEFAILLEGIQGVCDAI 522 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGR---FDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + + + + M D + + +L + ++ + Sbjct: 523 QVADAIEQTLTLPFNLEGRDVFMTTSIGIALNTNRDRQVLSAENILRNANTAMHRARSQG 582 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARL 526 + + T ++ L +R A+++ + ++ QPI + + G++ +L Sbjct: 583 K-PGYAIFDNQMLSPTVDRLQLETDMRRAIERQEFQVHYQPIVSLLTHQITGFEALLRWQ 641 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLT 583 G++ P +F+P+ + L +L + L+ + +VNL Sbjct: 642 HPQRGLVFPAEFIPIAEETGLIIPMGWWILREACRQLSIWQQQFQSPQPLTMNVNLSCKQ 701 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q ++ +I ++ + +I+ ++ LEITE N E + +L K + IDDFG Sbjct: 702 FTQPDLLAQIDQILEETNIAVGSLKLEITESVVIDNPELVKDLLLELKKRQIHLCIDDFG 761 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ RL +KID F+ I ++ IV++I LA+ S+ VVAE +E + Sbjct: 762 TGYSSLSRLHNFPISTLKIDRSFISRIGALGENSEIVQAIITLARTMSMDVVAEGIELLE 821 Query: 704 QQALLHKLGVQYLQGYLIGRPQ 725 Q + L L Y QG+L +P Sbjct: 822 QVSPLVALQCHYGQGFLFSKPV 843 >UniRef50_A3YAL9 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YAL9_9GAMM Length = 1003 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 96/592 (16%), Positives = 210/592 (35%), Gaps = 46/592 (7%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEN 236 + Y ++ P F + E R ++ +L+ ++ Sbjct: 396 VSYSISSDYNRPCFVALARDISRRKKAESELRIAATAFETQDGILITDTQHKIVRVNTAF 455 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 I GY + R+ F + + + Sbjct: 456 QKITGYQEAEILDQNISLLRSGRHDEIFFQKIFACIDDCGYWEGEIWNRKKCGEIVPELT 515 Query: 294 ILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 ++ + + + +Y+++ ++ + + + D LT LPN + + + EQ Sbjct: 516 TISTVYNDLKIPINYVYIIKDISLTKQNEQLINQLSYYDSLTCLPNRKMISEKVEQLIKQ 575 Query: 347 -----------EA-----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + + +D+ + ++ G + ++ + L+ ++ Sbjct: 576 AQHQSLTVNTSGHYLPLIRHALLFIDLDHFKNINDSKGYSVGDKLLQEVAHRLIDTVRST 635 Query: 391 EKLYQLPGSELLLVLSGPE---TEGRLQHMVNIL-------NSRQIHWNNTGLDMGYGAA 440 + + + G E +L+L G + GR + + ++ N + Sbjct: 636 DIVARFGGDEFILLLEGVDVSLDAGRALYRAKKVSCLINDALAQVFEINGEHFYISSSVG 695 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 D + + + ++ + + + ++V L +R AL Sbjct: 696 ITEIDESVDEVFDAFKHAELAMYEAKSSGRNR-YCFYSPQMQEKILERVNLETAMRKALI 754 Query: 501 QGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + + LLY QP + G + ++ D GI++P +F+PL L V+ Sbjct: 755 KDEFLLYYQPQFDDLGVLRGVEALIRWHHPDKGIISPMQFIPLAEDSKLIIPIGEWVVRE 814 Query: 559 LLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 LA D + SVN+ + Q + + + S + + E+TE Sbjct: 815 ACNTLARWRDDPLLSQVKVSVNVSVIQFAQDDFVDLVRLILVETGASAKLLQFELTESML 874 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + + + ++ L G +++DDFGTGY++ L++L D +KID FV+++ Sbjct: 875 IDDKANILAKMQGLKALGVLLSLDDFGTGYSSLSYLQQLPFDQLKIDQSFVRNLNGQGDQ 934 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +IT + + L V+AE +E ++ L G QGY +G P PL+ Sbjct: 935 HPLALTITTMGHSLGLEVIAEGIEEKESLLKLQSFGCNLFQGYFMGHPMPLS 986 >UniRef50_A6FEH9 Sensory box protein n=1 Tax=Moritella sp. PE36 RepID=A6FEH9_9GAMM Length = 627 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 91/432 (21%), Positives = 174/432 (40%), Gaps = 21/432 (4%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYG 368 +H A D LT L N R L Q E + + + +D + ++ G Sbjct: 186 QSQEEFHRLAFFDSLTGLANRRLLNQTIETQYQLAKTNQVVGALLFIDLDFFKAINDSLG 245 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMVNILN- 422 + + + L + + + + +L G E +++L E + L Sbjct: 246 HAVGDGILVEVAERLKEIPRPEDFIARLGGDEFVILLPDLSENPMHAEQHANLLAEQLIE 305 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 S+ + L +G F + LL Q Q+ ++ + Sbjct: 306 RISQPYLYKGQALYIGASIGVTLFPSKDQHADDLLKQADTAMYQAKSNGRKKVY-FFDVK 364 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDK 537 + + K++ + N +++A+ + +L L+ QP +N + G + ++ ++P + Sbjct: 365 MQRKADKRLHIYNCLKSAIAKNELFLHYQPQHMVQNGDIIGVEALVRWHLGGKQQISPAE 424 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + +L + VL++ + SVN+ N ++ + Sbjct: 425 FIPIAEETDLIIDIGIWVLQAACRQFVEWQLQGVNVPQLSVNVSTRQFHDNNFVDSVLMV 484 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P + LEITE +AE ++ + L G A+DDFG GY++ LKRL Sbjct: 485 LDETGMDPMQLNLEITESVVIEHAEDAIRKMTDLKNIGVSFAVDDFGVGYSSLSYLKRLP 544 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 A+ +KID F++ I N D IV ++ +AK +V AE VE++QQ L + + Sbjct: 545 ANELKIDRSFIQGIPYNVSDMAIVEAVLAMAKHMGFNVTAEGVESRQQLEFLQRQQCSFY 604 Query: 717 QGYLIGRPQPLA 728 QG+ +P Sbjct: 605 QGFYASKPLTGE 616 >UniRef50_A0Q1B8 Diguanylate cyclase/phosphodiesterase domain 2 n=2 Tax=Clostridium RepID=A0Q1B8_CLONN Length = 961 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 100/469 (21%), Positives = 184/469 (39%), Gaps = 19/469 (4%) Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPL 331 ++ L E L +L + + ++ A D L Sbjct: 478 IDVECRILDEFNYENWFNIKGKALRDGEGNVLKIAGSITDITDRKEAIKKIEYLAYNDSL 537 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN A + + + L IDN + ++ G ++ + + + Sbjct: 538 TGLPNRVAYSRDIYGIIQNVKKDNKIGAIMFLDIDNFKNVNDTLGHDYGNELLKKVNKRI 597 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAA 440 ++ E+E+ Y+L G E ++V G E ++ + + + S+ N + Sbjct: 598 SNILTEDERFYRLGGDEFIIVQCGSYNEKDIELLADNILKLFSKSFIVKNEHIYTTVSLG 657 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F + LL + + +S ++ L +R A++ Sbjct: 658 ISFFPKDSCDQSVLLKYADTAMYSAKNLGKSK-YLIYNKEMSSNLIRRSQLEEGLRHAIE 716 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + +L L QP N E +G + +L G ++P +F+ + + L VL Sbjct: 717 RKELKLVFQPQVNANTGEIKGVEVLLRWNSEKFGFVSPSEFIVIAEKSGLINSIGEWVLR 776 Query: 558 SLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + K SVN+ + L Q + ++ + ++ + P+ + LEITE Sbjct: 777 ESCLKRKQWQIENLKDITISVNVSVIQLQQDDFIEKLKEILEKTKLPPECLELEITESVM 836 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + E+++ + + G +IA+DDFGTGY++ LK L + IK+D F+ I N D Sbjct: 837 MESKETNLDILNSIRDIGVKIALDDFGTGYSSLSYLKMLPINKIKLDKSFIDTIHINKND 896 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 IV I DLA L+V+AE VE +Q +L + +QGY +P Sbjct: 897 KFIVEGIIDLAHKIGLNVIAEGVELNEQLDVLCEANCDEIQGYYFSKPV 945 >UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodobacter sphaeroides RepID=Q3J1Y6_RHOS4 Length = 833 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 91/560 (16%), Positives = 181/560 (32%), Gaps = 35/560 (6%) Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFFIIFT 252 R + E R + A + + + + L + Sbjct: 253 ERRTTVEQLRESEARFRAFADDAPVMIWVTDTEGRNVFVSRSWLGATGQSLDEALGTGWI 312 Query: 253 LGVGKLRYPFLNLT--WAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLY 307 V A+ + + + + + Sbjct: 313 DAVHPDDRDATAAITREAMRRRIAYTNEFRIRRKDGGWCWVIDVGHPRLLADGTFIGYIG 372 Query: 308 MVRIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQ-------APEQEAGKSFC 353 + A D LT LPN + E + Sbjct: 373 CCVDISARRQAEDDRVMAQLQVFHMARHDMLTGLPNRHYFGDCYQEAVASLAPERSVAVL 432 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G + + + L ++ + + +L G E ++ + +E Sbjct: 433 MLDLDGFKTVNDTRGHPVGDQVLCEVANRLRTSVRSTDTVARLGGDEFAVIQTPIRSEQE 492 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + L S+ ++G G+ ++ + ++ + Sbjct: 493 ACDLARRLIAAISKPFDLEGAVPEVGASVGIAFARGHGDSAEEIMRYADVALYAAKQAGR 552 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 +E + + +R AL G+L ++ QP+ + + + ++ + Sbjct: 553 G-TFRVFDEATDTHLQSRQKMKAALRAALGLGELSVFYQPLIGLRDGQVTACEALMRWHR 611 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G +TPD+F+PL + L VL A P +VNL PL Sbjct: 612 KGAGWITPDQFIPLAEEAGLIGDMGDWVLHEACAQAARWPD---SVSVAVNLSPLQFHGG 668 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ + + P+ + LEITE + ++ ++ L G +I +DDFGTGY+ Sbjct: 669 ALVDQVASALRASGLPPERLQLEITESVLLDPTDRNIGVLQDLRALGAKIVMDDFGTGYS 728 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+ D IK+D F++D+ I++++ L ++ + E VETQ Q Sbjct: 729 SLGYLRSFPFDKIKVDRSFIRDLPDAREALAILKAVAGLGRSLDMRTTVEGVETQAQLDC 788 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 GV QGY RP P Sbjct: 789 AIAEGVDEAQGYFFSRPLPA 808 >UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=2 Tax=Proteobacteria RepID=B8INP3_METNO Length = 794 Score = 608 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 118/751 (15%), Positives = 232/751 (30%), Gaps = 56/751 (7%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRG 63 + I+ F + L + S + L + +++L R Sbjct: 53 AAVAGGSGIWATHFIAMLAFEPGLPSGYDIGLTVRSLAYAVVLTGLGLAVTLL----RRI 108 Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 G + + A + + LG + Sbjct: 109 PFTAGLGGLILGSGIAAMHYTGMAAFEIAGRIIWDPTLVAASLVLGALLGGAALPVALGP 168 Query: 124 RLFW----LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 L+ I ++ S + + + + I Sbjct: 169 HGVRSQTAGALLLLGAICSLHFIAMGALTIVPDPSIAISETAVPSRWLAVAVALASGAIL 228 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + L I +R +L+ A +++ + Sbjct: 229 LLAGGALALDIRDRRTIVES------------ERLRSLANAAVEGLVVCRDDIIVSANDS 276 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 G LV + P A++ + I+ + Sbjct: 277 FGRLVGIAATAVAESSLSRFLPDPATRLALTRQSEQLIETELRGAEGEMIPVEVIMRPVT 336 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGK 350 VR R A D LT L N + Q + Sbjct: 337 YGRRPHFAVAVRDLRARRQAEGRIQFLAHHDALTGLANRTSFTQRLDLELKLAEATGRKL 396 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + CL +D + ++ +G + ++ R + ++ E + + +L G E + L+ + Sbjct: 397 AVLCLDLDRFKEVNDLFGHAAGDAMLVNVARVVTGILGETQMMARLGGDEFAV-LAACDH 455 Query: 411 EGRLQHMVNILNSR----------QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 H+ + + + + + LL Sbjct: 456 AITAGHLAERILEALRSENADAAGPL--------VATSIGIALYPDDASERDVLLSHADT 507 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 ++ + E + Q + +L + +R A+ +G++ L QP E Sbjct: 508 ALYRAKSEGRG-TYRFFEHKMGVQVRDRRILEHELRHAVARGEMHLVYQPQTQVETGEVI 566 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 G++ +L + G ++P F+P+ + + VL + A+ P +V Sbjct: 567 GFEVLLRWHHPERGAVSPAVFIPIAEESGAILQIGEWVLRQACRDAASWPN---PLAVAV 623 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ + + + + + + + P + +EITE + ++ + Q+ G I Sbjct: 624 NVSAVQIHAPHFVQLVHEVLLQTGLKPDRLEIEITETALIRDPVRALSTLRQVKALGVHI 683 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 A+DDFGTGY++ L+ D IKID F++ + TN A IVRS+ L + L V+AE Sbjct: 684 AMDDFGTGYSSLSNLRSFPFDKIKIDPSFIRAVDTNEQTAAIVRSVLGLGRGLGLPVLAE 743 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET + L QGYL+GRP P+ Sbjct: 744 GVETDAELRFLAAENCDAAQGYLMGRPAPIE 774 >UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MBY4_DIAST Length = 790 Score = 608 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 111/566 (19%), Positives = 200/566 (35%), Gaps = 24/566 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-LLLLCTPYENDFIAGYLVP 245 + + H A+ ++ +L + GY Sbjct: 213 LQSLREVHAARDAQALSEQRWRLAATVVDNTIEGVVVTDADGRILSVNPAVTRLMGYTEE 272 Query: 246 VFFIIFT--LGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 G+ F W + + + L+ + Sbjct: 273 ELLGQNPRVFKSGRHGPAFYEAMWDTMRQTGHWQGEIWNRRKNGEVFPERMSLSAVRGAD 332 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKS 351 + M + ++R A DPLT LPN + + + Sbjct: 333 GAVTHYVCMFTDISEEKAQHQRLEFLAHCDPLTGLPNRAWFGEQLDSAVRQAQDSGEQMA 392 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ YG + +R I R + ++ + L +L G E+ ++ Sbjct: 393 LLLLNLDRFKDVNDSYGHAVGDEVLRHITRQVEQSLRPGDLLGRLAGDEIAVLARHLRHA 452 Query: 412 GRLQHMVNILNSRQ----IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + L + + + +G F + T + LL + A Sbjct: 453 DGAAAVARHLIAAASTPWCTPDGIQVVVGVSVGICMFPAHARTTEALLQGAHSSVYGAKA 512 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 A +E + +++ + +R AL QG L LY QP G + ++ Sbjct: 513 RGRG-AYCFFDESLIQAARERLEIEARLRVALAQGHLRLYYQPQVCIVTGRIMGAEALVR 571 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 L G+++P +F+P+ + V+ + + D R ++NL P Sbjct: 572 WLDPQEGMISPARFIPVAETSGVIGPLGQWVMRAACEQGQRWRADGLPEIRLAINLSPRQ 631 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 ++A K + + LE+TE + +++L + G R+A+DDFG Sbjct: 632 FQLTDVAACAAEALKASGFPARCLELELTESVLAERPDEIRAVLQRLQQLGVRMAVDDFG 691 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR D++KID F++DI + D I +I + + LSV+AE VET Q Sbjct: 692 TGYSSLAHLKRFPIDVLKIDQGFIRDIPRSADDMAISAAIVAMGHSLGLSVLAEGVETPQ 751 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L + G QGYL RP P + Sbjct: 752 QLAFLRERGCDAYQGYLCSRPLPAEE 777 >UniRef50_A2SJS2 Sensory box/response regulator n=3 Tax=Bacteria RepID=A2SJS2_METPP Length = 754 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 98/619 (15%), Positives = 210/619 (33%), Gaps = 39/619 (6%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 L + + + + S ++ + Sbjct: 92 VLMLTGLDDDASITRAYEAGATDFFVKSTQWSLLAGRLRYLLRSSRTRLELERSKSKLAR 151 Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 R + W S LL + G + + +I + + L Sbjct: 152 AQDLARMGSFDWRRDRSGLLFSVEGLRVFGLGPGDHLGMRSLIRMVPAEHRQGCLSLLRD 211 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHL 324 ++ +L + + + +V+ + Sbjct: 212 TLARSTVLATDFPVQLIDGRQRVVHVEAEPEFNEHGNLTGYTGIVQDVTDRRVAEDKIRH 271 Query: 325 QALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT LPN R L EQA + +D + ++ G + Sbjct: 272 LANFDALTGLPNRRQLIWRAERAMEQAKRLNHQVGLLLIDLDRFKVINDTLGHGAGDELL 331 Query: 377 RSICRTLLPLMQENEKL-------------------YQLPGSELLLVLSGPETEGRLQHM 417 + R L ++ ++++ +L G E + +L + + + + Sbjct: 332 MEVSRRLRSCVRHSDQVVETGIDSVGLRAHRSLEAVGRLGGDEFVALLPEVDADQDAERV 391 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + I + F + ++ +L + A A Sbjct: 392 ALRILEVMREPIFVGGQECFVTASVGIALFPRDGASVADVLRNADVAMYSAKAAGRNAA- 450 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 ++G+ +++ L + + A+++ +L+L+ QP + G + ++ + +G Sbjct: 451 SLYRPHLAGKGREKLELESALHKAIEREELVLHYQPKIDVRTARMVGAEALMRWKR-NGV 509 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIA 590 ++ P F+PL + L + + +VNL + ++ Sbjct: 510 LVPPGDFIPLAEETGLIVPMSEWAIREATRQARLWQQHHGIDTSIAVNLPSRLFERTDLV 569 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + + ++ + LEITE + ++ + + +L++ G I+IDDFGTGY++ Sbjct: 570 THIQQAAAAHGVTHSCIELEITETGLMKDLQNVIPALHRLNEIGVEISIDDFGTGYSSLA 629 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L L +KID FV+D+ + +V +I LA++ + V+AE VE +Q +LH+ Sbjct: 630 YLTTLPISELKIDRSFVRDLGVTLQSSAVVTAIIALARSLGIRVIAEGVENLRQMEVLHR 689 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG +QG+L + P D Sbjct: 690 LGCSTMQGFLFSKALPPED 708 >UniRef50_B1WWM4 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=B1WWM4_CYAA5 Length = 967 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 100/565 (17%), Positives = 209/565 (36%), Gaps = 28/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + F+Q + + I + ++ L Sbjct: 386 LKKLRFSQANYHQLINNLQAGVIIYDPRGNMMMANLAASELLDISSESLSLYSSPEARVT 445 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-----SFSVC 304 L ++T L+ + S+ ++ + Sbjct: 446 FVDESGATLPPQEHPCQQVLTTQVPLHNYVMGIHRQRPLDSIWTLVNAFPAFDDQNHLTQ 505 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCL 355 ++ ++ + + +AL D LT LPN L + + + + Sbjct: 506 VVVLLLDITDRKLAEEQLRYRALHDALTGLPNRTLLTERLDHAIQRVKRYPDSLFAVLFI 565 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G ++ + I TL ++ ++ + +L G E +++L + + Sbjct: 566 DLDRFKVINDSLGHLVGDQLLIYIANTLKRHVRSSDTVARLGGDEFVILLENLTSPHEVV 625 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ + + I N L T + +L ++ + L Sbjct: 626 QVIERIEKDIKKPIQLMNKTLFTSASIGIALSSPEYGTGEDILRDADNAMYRAK--GNNL 683 Query: 473 A-LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + + + L ++R AL+Q +L+ QPI + E G++ ++ + Sbjct: 684 TSYELFNVEMRQTMLEVFELETSLRQALEQQQFILHYQPIVSATSLELLGFEALVRWVHP 743 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLL 585 + G+++P KF+PL + L + + +A D + + S+N+ Sbjct: 744 EKGLISPGKFIPLAEETGLIIPLSEWIFQEACSQMAQWCADFRMASSLKMSINIAAYHFQ 803 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 +I ++ + + + LEITE N + + + QL + I++DDFGTG Sbjct: 804 SPQFLEKIDQILTETQLLGKNLKLEITESLLIKNTDRFLSLVPQLQQRQIEISLDDFGTG 863 Query: 646 YANYERLKRLQADIIKIDGVFVKDIV--TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 Y++ LKR + +KID FV + N D I+ +I +A++ + VVAE VET + Sbjct: 864 YSSLNYLKRFPINTLKIDKSFVDGLDYQKNQADVSIIEAIIHIAQSLGMDVVAEGVETDR 923 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ L +LG + +QGYL+ P Sbjct: 924 QRQQLQQLGCEAIQGYLMSPPLTSE 948 >UniRef50_Q2BJL1 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJL1_9GAMM Length = 984 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 109/560 (19%), Positives = 206/560 (36%), Gaps = 36/560 (6%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 RDI S E+ LS S + D I Y+ P+F + Sbjct: 419 RDITQSRRDEEHIRLLSSTVEQS---TNEVIITDTDGIIVYVNPMFTENTGYLPEEAIGR 475 Query: 262 FLNLTWAVSTLCL--------------LNYNQNFLQGVETEYSLAFILAVLISFSV---C 304 ++ + + ++ + ++ + + Sbjct: 476 KSSIVQSGEMSAEFYRNLWETIKKDNCWKGEIINRKKSGEKFWQSMSISPIHDETGAISH 535 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLR 356 L + + + R+ QA D LT LPN A++ A + + Sbjct: 536 YLSLKSDITKQKEAERQLRYQAEHDLLTKLPNRPVLLAEMDSAIDDARNNHCFSAVLFMD 595 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +DN + ++ G + ++ + + L + + + +L G E ++ G +++ Sbjct: 596 LDNFKDVNDTLGHLSGDFLLQLVAKRLEQCISITDVIARLGGDEFAIIQRGIKSKHEPSV 655 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + ++ L +G + LL ++ A Sbjct: 656 LAEKVINAITTPFRVDDHLLHIGISIGITLIPEDGLETGMLLSNADMAMYEAKAISGSH- 714 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + + ++ L+ + + A++ +L L QP G + +L + Sbjct: 715 YKFFDHDLQLSIQRKRLIESHLHNAINNNELNLLLQPKIEIHTGHIVGAEALLRWHSTEI 774 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNI 589 G ++P +F+P+ + VL L+ + +VNL + L N+ Sbjct: 775 GQVSPAEFIPIAEKSGQIIELGNWVLNQALQLIKDWCQKGYKIPKIAVNLSAVQLKDVNL 834 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I + + Y + + + LEITE A S+ E S + + +A+DDFGTGY++ Sbjct: 835 VQDIKKALEHYQVHSEYLELEITETAAMSDPEFSNSQLSAIKAMNITLAMDDFGTGYSSL 894 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L L D +KID FV DI + I+ SI L K + +V+AE VE +Q LL Sbjct: 895 SYLASLPIDRVKIDRSFVSDIQHSNEARGIIESIIHLGKILNKTVIAEGVEETEQLELLK 954 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 +LG QGYLI RP ++ Sbjct: 955 RLGCHEAQGYLISRPVASSE 974 >UniRef50_A4C531 Sensory box protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C531_9GAMM Length = 725 Score = 607 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 83/558 (14%), Positives = 181/558 (32%), Gaps = 33/558 (5%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 ++R + + +L Y F + Sbjct: 154 LSQQQLKDNQQRYELALKSSGAGIWDWDILNDVVHYSAKFSDLLGFDNLLFGTSWSSWTD 213 Query: 259 R-YPFLNLTWAVSTLCL-------LNYNQNFLQGVETEYSLAFILAVLISF---SVCLLY 307 + +P + N + + + L ++ Sbjct: 214 QIHPDDLDIFETQLQNHLDDADKPFNIECRLISQKKKVLWFTVVGEALRDEHGYPTRMVG 273 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + + QA D LT LPN + + + + +D+ Sbjct: 274 SMVDITLKHQSQQMIWQQANFDHLTGLPNRNMFTERLKQEISESKRYQQKFALFFIDLDH 333 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + L +++E++ + ++ G E ++ + + Sbjct: 334 FKEVNDTLGHGAGDQLLIEVAERLQLILRESDTIGRIGGDEFTALIPHINQTCDIDSLAQ 393 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + + + + F + E + LL +S + Sbjct: 394 KLIQTIELPFYIDGESIFISASIGITLFPDHSEKIDELLKFADQAMYRSKENGRKR-FSY 452 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 + Q L + A+ + + QPI +++ + ++ + G++ Sbjct: 453 FTFAMQEQADHTRNLTQELHLAIIEQHFHVVYQPIMALPSRKITKAEALVRWDHPELGLI 512 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLL--QKNIA 590 +P F+PL + + V + K + S+N P+ N Sbjct: 513 SPADFIPLAERSGVIIEIGNWVFYNAAKQALKWQQEIDPSFEISINRSPVQFQNPDPNAD 572 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + L K + + + +EITE + + + G I++DDFGTGY++ Sbjct: 573 QKWVELLKNLGLI-KGICIEITEGLLLDDTQGIKDKLLYFQNNGMDISLDDFGTGYSSLS 631 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L + + +KID F+ D+ N + + +I +A L V+AE VE+Q+Q L + Sbjct: 632 YLTKFDINFLKIDRAFINDLEHNQNNQALCEAIIVMAHKLGLKVIAEGVESQRQLDFLAQ 691 Query: 711 LGVQYLQGYLIGRPQPLA 728 ++QGY I +P A Sbjct: 692 AQCDFVQGYFISKPISAA 709 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 607 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 114/636 (17%), Positives = 216/636 (33%), Gaps = 50/636 (7%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 M L + L S + + + V + L L R + Sbjct: 1 MSLYVTTPRPRLGHSMVRANMAGAGAALTIAGFLLIVFQFIALHAALVRDVHVQARIVGA 60 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + TL L A L +A Y + LR Sbjct: 61 NSVAALLFNDRRAAEETLGALEASPSLRAAGIFSALRKPLALYQHGDAAPVRAPDAAMLR 120 Query: 260 YPFLNLTWAVSTLCLLNYNQNFL-----QGVETE-------YSLAFILAVLISFSVCLLY 307 ++ + + + + + + +E Y++ + + + + L Sbjct: 121 ESAVSTLTTLEVVEPVESERRVIGYVVVRSSLSELYMQLLGYAVLTVSVGIGAMGLAYLV 180 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------QEAGKSFCCLRIDNL 360 + R+ A D +T LPN A + + Q L +DN Sbjct: 181 IARMRRAVLQAEAHLDYLAHIDSVTELPNRHAFNERLQVSLKRAGQTGAVGLLLLDLDNF 240 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQE---NEKLYQLPGSELLLVLS--------GPE 409 + ++ G +R + R L ++++ L ++ G E ++ E Sbjct: 241 KVVNDTLGHNNGDRLLRQVARRLNDVIEQANLRAVLCRIGGDEFAVIAELSGRAQIAETE 300 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + + + + + +Q L + Sbjct: 301 AATLADGLAKRILAALGAPFSLDLHQIYVTASVGVSLYPHDARDVQVLTRNADTAMYHAK 360 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-----NKE------ 515 H A S + Q +++ + +R ALD+ +LLL QP + Sbjct: 361 NHGKNAA-ASFTSEMDQQARRRLRVEADLRRALDREELLLAYQPQVRLSTDDAHDAVISR 419 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKG 572 G + ++ + G++ P +F+ + + L L VL + + D Sbjct: 420 ANVYGVEALVRWRHPEIGLIGPGEFIAVAEETGLIVPLGLWVLRTACQQAVRWMREDGVT 479 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VNL + ++ + + + P + LEITE + E+++ +E LH Sbjct: 480 LRVAVNLSARQTRDPALVENVMDVLRETGMPPHQLELEITESVLMEDIEANIALLESLHA 539 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++IDDFGTGY++ L+R +KID FV+ + + I ++ +A + + Sbjct: 540 AGISLSIDDFGTGYSSLAYLQRFPIQKLKIDRSFVQRMPGDGE--AIAGAVIAMAHSLRM 597 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VE +Q ALL G QGYL RPQ Sbjct: 598 QVVAEGVEDPEQLALLRDAGCDLGQGYLFSRPQQAD 633 >UniRef50_A6W0I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0I4_MARMS Length = 806 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 109/562 (19%), Positives = 206/562 (36%), Gaps = 31/562 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFFIIF 251 ++ + + AA +LL + L + + Sbjct: 230 KRLNTALSDLERSDSHTKAMIEHAADGILLLDENYQITLVNAAAEHMLKMKSEDLNSKSL 289 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS-VCLLYMVR 310 + +P + + + E + LA L ++R Sbjct: 290 DVLHSPSSWPEFFNILESLEVNSPTTVETIYRMQGIELPVEIRLAKYKVQDKTETLLLIR 349 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----------EQEAGKSFCCLRIDNL 360 + R H A D +T LPN + L + + + +D Sbjct: 350 DVSERKETEARIHHLAYYDSVTNLPNRQYLADKLYKAIKTKQKNTTSSYSAVVFMDLDRF 409 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----EGRLQ 415 + ++ G + + + L L +EN ++ G E +L+ E + Sbjct: 410 KTINDSLGHNVGDQLLCCVATQLSSLTEENIVFARMGGDEFAFLLTHVGDDKEKVEKAIN 469 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 V + + + + + FDGN+ + + +L Q ++ Sbjct: 470 GFVESVMYACQQVKKAGHHEVHITASLGATIFDGNEGSAEAILKQADTALYRAKESGRN- 528 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDG 530 + + + ++ + + A + LY QP N E G + ++ Sbjct: 529 TFALYKPEMQAVSDARLEMEKALHHATEFKLFELYYQPQTNDKNELIGAEALIRWKDEKK 588 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQK 587 G ++P +F+P+ + L VL L +AT + R S+N+ P+ Q Sbjct: 589 GFISPAEFIPVAEEIGLIVEIGHWVLNEALSQVATWLKEGKWQLSWRMSINVSPIQFQQA 648 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + +++ + P V LEITE ++ S + + + G ++IDDFGTGY+ Sbjct: 649 GFLPMLKTQLEKHDVPPSCVDLEITENMLLNDLSSCLKKMNAIKALGVHLSIDDFGTGYS 708 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + + LK L D +KID FV+D++T+ D IV ++ +AKA ++SV+AE VET Sbjct: 709 SLKYLKSLPIDRLKIDQSFVRDLLTDKSDEAIVHAVIAMAKALNISVLAEGVETLLHYNR 768 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L ++ Y QGY G P P + Sbjct: 769 LREIDCFYYQGYYFGHPVPPNE 790 >UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Magnetospirillum RepID=Q2W7L5_MAGSA Length = 916 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 115/651 (17%), Positives = 233/651 (35%), Gaps = 33/651 (5%) Query: 109 GTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF-TVV 167 G R+ + + G V + + VG++ DA+ V Sbjct: 254 GRRFVVVVEQPLLSALKLPGGAVVIVTLVLLFGGVGAWVLVRYSRRAILAPIDALAEAVR 313 Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 D+ + + + + ++ + + E++ + A+ ++++ Sbjct: 314 DVEAGDMSRRAPVESSDEIGALAMAFNSMTGRVAGLLNDLGESEEKFRLVMESASDALVV 373 Query: 228 -------------LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV-STLC 273 Y+ I G V + + L + + + Sbjct: 374 IDAEGKIVSWNGAATRMFGYQPAEIMGRNVSLLMPEHL--RERHDQILARLRAKIDARIR 431 Query: 274 LLNYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 Q ++ T + + LA + ++R + A D LT Sbjct: 432 TDPREQPAMRQDGTLFPVEVTLAGFSFKGNRFYSGIMRDISARKEAESNIRFLARHDALT 491 Query: 333 LLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 L N L + ++ + +DN + ++ G + + L Sbjct: 492 GLANRVVLRERLDEILPQTGARQMHCLLFIDLDNFKLVNDVLGHSFGDRLLVEVAGRLRS 551 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWG 442 + + + + G E +L+ T R + + + + +++G Sbjct: 552 IEGGHNIVCRHGGDEFILLAPDIRTRERAAELAERVLAVMGDAFAIDAQAIEVGCSIGIS 611 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + L+ + ++ L + Q ++ L ++R L G Sbjct: 612 VAPDDGTDAETLIRKADIAMYKAKEKGR-LGYQFFTAAMDHQMVERRELEKSLRRGLRDG 670 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 ++ ++ QP + G++ + + G++ P +F+PL + L VL Sbjct: 671 EIFIHLQPKVRLGDGGVTGFEALARWQSAEHGLVPPVRFIPLAEECGLVGAIGDVVLRRT 730 Query: 560 LKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 L+ LA + +VNL + L +AG I L + + + P + LE+TE Sbjct: 731 LETLAGWRAAGRKVLPVAVNLSAVQLGNPALAGEIGALLREFDLPPSLLELELTESMLMG 790 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + + +L G R++IDDFGTGY++ LKR D++KID FV D+ + Sbjct: 791 DVDQVRAILFRLKDQGIRLSIDDFGTGYSSLSYLKRFPVDVLKIDRSFVTDLPGDPEGEA 850 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +I +AKA SL V+AE VET+ Q L + G Y QG+ RP P+ + Sbjct: 851 LCLAIIHMAKALSLDVIAEGVETEAQSLFLARHGCDYAQGFHFARPVPVDE 901 >UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8I8_9ALTE Length = 1020 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 118/570 (20%), Positives = 210/570 (36%), Gaps = 34/570 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV--LLLLLCTPYENDFIA 240 F L R I + R T L + E+D + Sbjct: 454 FLTLVRDITEDKVLEAELRIASTAFETHLGIIITDENSIILRANKAFSRITGYAEHDVLG 513 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + L V L+ Y+ + + Sbjct: 514 KTPNVLQSGLQDATFYHY------LWARVRESGSWEGEIWNLRKDGEAYAEWLTITAICG 567 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 S + + + R H A D LT L N LE+ Q Sbjct: 568 KSGVVQNYVGTFHDITKRKKAEREAHRLAFYDSLTGLANKALLEERLSEVCKANTRQNTH 627 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + ++ L ++ G +++I L +++E++ L ++ G E ++LS Sbjct: 628 AALLYVDVEQLRSVNDARGYEFGDLVLKAIAEQLGTMVRESDTLARIGGDEFAILLSNLN 687 Query: 410 TEGRLQH-----MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + + + + R I + + DG + L + Sbjct: 688 PSQDVAARVTEGVADKVLDAFTRPIEVLQQKIQVNISIGITLIDGRSSPVDQQLQRAEQA 747 Query: 462 AEQSCAHHHVLA---LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEG 516 +Q+ + + + + Q + VL+ +R AL + L+LY QP + Sbjct: 748 TQQAKEQAKLRGEKRISFFDPEIQAQVVQHVLMEEELRNALAEEQLVLYYQPQIRNPNQL 807 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPR 574 GY+ +L GI++P F+P+ Q L ++E + LA + Sbjct: 808 LGYEVLLRWRHPKRGIVSPAVFIPIAEQSRLILPIGRWIIEQACEKLAAWQSEPTTSELS 867 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ + N ++ ++ ++ P+ + LE+TE ++ E + +L G Sbjct: 868 LAVNVSIIQFQSNNFVEQVGQILEKTGAPPRLLKLEVTESLLMNDPERITEMMNRLRSMG 927 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 R ++DDFGTGY++ L +L D IKID F+ ++ N + IV SI LAK +L V Sbjct: 928 VRFSLDDFGTGYSSMSYLNQLPLDQIKIDQSFINEVANNLASSAIVESIIGLAKGLNLEV 987 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +AE VET++Q+ L G Q QGYL GRP Sbjct: 988 IAEGVETEEQRNWLANHGCQNFQGYLFGRP 1017 >UniRef50_A0YGV9 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGV9_9GAMM Length = 760 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 131/746 (17%), Positives = 247/746 (33%), Gaps = 42/746 (5%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNF 79 L + IS ++ + W + + I+ VV + Sbjct: 14 LDGLFKLYPISISSTYLLVLVNCYALWSVVP-TVHIVLWLSVATVVSIYRYSLFAIRTRN 72 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 ++ + L L + ++ + Sbjct: 73 STRLSPERWLIHNDVTSALSGMYWGYGLLYLVPPDSIAHMLIFVIAVTGLVSGASSSLSL 132 Query: 140 MYL----VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 P+ I + D + + L + + L + Sbjct: 133 SPRSFLLYMISCLMPMSILLYGMSDDYGWLLFGLCYFYIYFMWQTCLTIGENARLGIVQT 192 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT---PYENDFIAGYLVPVFFII-- 250 + R+ + + + L ++ + + + P I+ Sbjct: 193 --VSLRQQKEELIASGRLLDLHFMGSPLGLIDWDEDLKIKRWNPAAASIFGYPESEILNQ 250 Query: 251 --FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY- 307 L + + L N + S + L S LL Sbjct: 251 KPDFLLTDNAGRDYFKILRQGKQA--LANTVNSRKRDGGAVSCEWASTPLEDGSGTLLGY 308 Query: 308 --MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRI 357 V + ++ QA D +T LPN R + QE + + + Sbjct: 309 TSFVTDISKRLEHEQQITHQAFYDAVTDLPNRRYFYERLRQEMSRVQRGPNHSAVLFIDL 368 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET------- 410 D+ + ++ G + ++ L ++++E L +L G E +L+L + Sbjct: 369 DHFKNINDSLGHALGDELLKQFAMRLQNRLRQHEVLARLGGDEFVLLLEELDPDLDKSQA 428 Query: 411 -EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 G++ + L N + FD +L Q +S Sbjct: 429 IAGQVAKALQTLIQEPFVLENNPYTLTCSIGITLFDKTDFNESEILKQADLALYRSKHRG 488 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 E+ +S Q + ++LLN +R A+ + L QP + E +G + +L Sbjct: 489 RN-CYSFFEQEMSEQALRHLILLNNVREAIGSEEFSLVFQPQVDIHTAELKGAETLLRWN 547 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLT 583 + G ++P +F+P++ L VL+ + L R ++N+ P Sbjct: 548 NSELGRVSPAEFIPILESSTLIVEVGHWVLDHSFEQLKEWQLAALWHEPMRLAINISPRQ 607 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 LL + ++ L ++ +SP + EITE + E +++ G +IDDFG Sbjct: 608 LLDPDFIEQVTALLNKHELSPSLIEFEITENVLVQDVEKVGVILDKFASMGISFSIDDFG 667 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+L D++KID F+ + D +IVRSI + L+ VAE VET++ Sbjct: 668 TGYSSLSYLKQLPIDVLKIDKSFIDHCTSEGNDQVIVRSILSICTELGLTSVAEGVETEE 727 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 QQ L +G LQGYL RP + Sbjct: 728 QQKKLQAMGCDLLQGYLYSRPVRADE 753 >UniRef50_A1TQ27 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=5 Tax=Comamonadaceae RepID=A1TQ27_ACIAC Length = 962 Score = 606 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 128/700 (18%), Positives = 222/700 (31%), Gaps = 38/700 (5%) Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 I GW + + L A A + +R Sbjct: 262 IRGWVAAPFRVAAVAGALLGELDPGVSLRIQDG----LAGGGADADVGELYNSRDAAEPA 317 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 +RL + I + P D A+ + L A Sbjct: 318 PHLSGERL----RAARVLIVGGRPWTLTMEPLPAFDHRLGRDNYALIAWLGALFSVLAGW 373 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 M R + R G + L + + +D Sbjct: 374 FIAMQATGHQRALALAQSMTSELRTARDNLEGILQAVPDLLVELDAGGRIHYHRS-ARSD 432 Query: 238 FIAGYLVP-----VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 A + ++ + +L + + E S+A Sbjct: 433 LSAEPSQAFEGRMLAEVLPPGVASEFMQALREAESQGVSLGRQYHQDTAMGQRWFELSVA 492 Query: 293 -----FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ- 346 A + + + R H A D LT LPN R L + + Sbjct: 493 RRLGVDSAAGQGGGASRYVALARDITARRDAEAAMHRMAYYDALTGLPNRRLLFEQLQDA 552 Query: 347 -------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +DN + ++ G + + R L L+Q + ++ G Sbjct: 553 LDQARSGGRIGALFFIDLDNFKQLNDARGHAAGDRLLVQVARRLERLLQGFGSVVRIGGD 612 Query: 400 ELLLVLSGPET-----EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E ++++ M L +T + F ET+ Sbjct: 613 EFVVLIPRIANGMQAGVDAAGAMAARLREGMEAPYDLGSTYYSVTASTGVTLFPKAGETV 672 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL + ++ + + E + +++ L + A+ L ++ P Sbjct: 673 EDLLREADTAMYRAKSSG-AHRVRFFEADMQAAAQERLSLEQDLAQAIADDALEIHIHPQ 731 Query: 512 RN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G + +L G ++P +F+ + + L R +V+ LA Sbjct: 732 VDRDGAVCGGELLLRWRHPAHGNVSPARFVAIAEESGLILRLGARVIRRACDALAQLHAA 791 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 SVN+ Q++ + +ILE+TE N + + + + Sbjct: 792 GLDMTISVNVSARQFRQEDFVAYVRDALAYSGAPASRLILEVTETLLVENWQDTARRMAE 851 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L +FG R +IDDFGTGY++ LKRL +KID FV+D N DA IVR+I +A+ Sbjct: 852 LVRFGVRFSIDDFGTGYSSLAYLKRLPLYELKIDRSFVQDAPVNPNDAAIVRAILSMAQH 911 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VET+ Q L + G +QGYL P PL + Sbjct: 912 LRLRVVAEGVETETQAEFLARHGCDAMQGYLYAHPLPLKE 951 >UniRef50_Q46PR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=3 Tax=Cupriavidus RepID=Q46PR7_RALEJ Length = 1076 Score = 606 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 102/518 (19%), Positives = 188/518 (36%), Gaps = 19/518 (3%) Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 Y + +A L + + L + +++ + Sbjct: 525 GAGIRYADLHVADELAERARDLTRELGETIAPGLPALVAKARLGLVDEREWTWVRKGGSR 584 Query: 289 YSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA-- 343 + L L + ++ AL D LT LPN L + Sbjct: 585 VPVQVTLRELPAEDGQPRQYQAIACDLTERHRVDEYIRHLALHDALTGLPNRAELTERCE 644 Query: 344 ------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + L +D+ + ++ G + +R+I L +++ + + ++ Sbjct: 645 AVLLHARRHGERVALLLLDLDHFKHINDSLGHPVGDDVLRTIADRLKAAVRQGDLVARMG 704 Query: 398 GSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +VL G + + + + S + L + F + E+L L Sbjct: 705 GDEFAVVLGGLRHDTEAELAASKILARVSEALEIGGQRLRVTPSLGIAMFPADGESLTDL 764 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 L + L ++ + ++ + +R A+D+ + L QPI + Sbjct: 765 LKSADAALYAAKQGGRAQ-LRRFASEMAEASLARLTIEGLLRRAVDEQEFTLRYQPIVDT 823 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-K 570 G + ++A + G+M P +F+P+ Q L L + + Sbjct: 824 STLAVTGVEALMAWHTPERGMMQPSEFIPIAEQCGLIGALGEWALATACSDIQALRTALG 883 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + +VN+ PL L Q + R ++ + P ++ +E+TE E+++ +L Sbjct: 884 RDIEVAVNISPLQLRQPGFPDLVARTLQQAGLPPGSLTIEVTEGILVEGGETTIDTFLRL 943 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G +++IDDFGTGY+ L RL +KID FV D+ D ++ +I L Sbjct: 944 RELGVQLSIDDFGTGYSGLHYLTRLPISRLKIDKSFVDDVARPGHDQVVAAAIIALGHQL 1003 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE VET Q L G LQGYL R Sbjct: 1004 HLKVVAEGVETMAQFEFLRAQGCDALQGYLFCRAVGPD 1041 >UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5U6_ALHEH Length = 802 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 113/518 (21%), Positives = 196/518 (37%), Gaps = 22/518 (4%) Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV-ET 287 + G + +F + L + W +L G+ Sbjct: 275 GGYVGWSAPLSYGGVHELFQRLGEPPYEHWGGLDLRVVWEQHPAIVLALMLIVTGGMAGA 334 Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ- 346 + L + R + R A DPLT LPN L EQ Sbjct: 335 VIKYRRLNRSLAVEVDQRRMVER---QLRQHQARLTHLANHDPLTDLPNRLLLTTRLEQA 391 Query: 347 -------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D + ++ G + +R + L + E + +L G Sbjct: 392 VARATGSGQRVAVLFLDLDRFKNINDSLGHAVGDDLLRILAERLRSQV-EANTVARLGGD 450 Query: 400 ELLLVLSGPETEGRLQHMVNILN---SRQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLL 455 E +++L G + L + L +G F N + L+ Sbjct: 451 EFIVLLDGISDLELVDQQARELLELVAESFSVGGWRSLQVGGSIGISLFPDNAQDASELI 510 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q + A + ++ ++++ +R AL+ L ++ QP + Sbjct: 511 TQADAAMYLAKAEGRN-TYRYYNQSLTAAASERLETETRLRRALELDHLEVFYQPQLDIT 569 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 G + ++ + G++ PD+F+P+ + L R QVLE +A D Sbjct: 570 TGALTGVEALVRWRDPEQGLIPPDRFIPVAEETGLIDRLGQQVLERACLQVAAWDRDGLP 629 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL + + +I +R ++P+ ++LEITE + AE ++ + L Sbjct: 630 ALDVAVNLSAHQIGDPRLCAKIRHALERSGLAPRRLVLEITESTLMTQAEGALGTLAGLK 689 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G ++AIDDFGTGY++ LKR D +K+D FV+D+ + DA + ++I +A Sbjct: 690 GLGVQVAIDDFGTGYSSLAYLKRFAIDWLKVDRCFVQDLPEDRNDAELTQTIVYMAHNLG 749 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VETQ Q L LG QG+L P P + Sbjct: 750 LRVLAEGVETQAQLDFLTHLGCDGWQGFLCSPPLPPQE 787 >UniRef50_B8I783 Diguanylate cyclase/phosphodiesterase n=2 Tax=Clostridium RepID=B8I783_CLOCE Length = 856 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 92/426 (21%), Positives = 180/426 (42%), Gaps = 14/426 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQA------PEQEAGKSFCCLRIDNLEFMSRHYGLM 370 +++ AL D LT LPN R+L + + +DN ++++ G Sbjct: 425 QSEEKYNFMALHDVLTGLPNRRSLLEDSSRFLGINTGKKTVLLFIDMDNFKYINDTMGHE 484 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIH 427 I + L +++ LY+L G E +L++ E + + ++ + + Sbjct: 485 FGDELINKAGQRLKTALKDLGTLYRLGGDEFILLIYNIENQFEAEDFMSQVLQSFKDEFE 544 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N+ L + + + + ++ L+ ++ + + ++ Sbjct: 545 IGNSVLHITFSIGAALYPDHGNNIEDLIKCADIAMYKAKEQGKNR-YVLYDRDMDKAFSE 603 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ + + TA+D + +Y QP + + G + +L + G ++P KF+ + Sbjct: 604 RMTIEKLLHTAMDNNEFEVYYQPQFDLQSQKITGLEALLRWKSSELGNVSPIKFIKVAED 663 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 +L VL ++ G SVN+ + +LQ +II + + ++ Sbjct: 664 THLIIPLGEWVLNQACAFVKELHEKGLQGLTVSVNISTIQILQSGFTRKIIDIINSHKLN 723 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + LEITE + + + +L K G RIA+DDFG GY++ LK+L +KID Sbjct: 724 PECLELEITETILIESFTTVFRKLNKLKKMGIRIALDDFGKGYSSLNYLKQLPISTLKID 783 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 F+ + + I R I L K+ ++++AE VE +Q L K +QGYL + Sbjct: 784 KSFIDSVSIDEEGRTITRHIITLGKSLGMTIIAEGVEFNEQLEYLKKYHCDRIQGYLFSK 843 Query: 724 PQPLAD 729 P P D Sbjct: 844 PLPGED 849 >UniRef50_Q1K008 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K008_DESAC Length = 995 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 96/578 (16%), Positives = 198/578 (34%), Gaps = 29/578 (5%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 R I R A + + + C Sbjct: 404 IVIDYRGEPCVLTAVRDISERREKDQRLRELSAVVDHSNDAVMIMDDSGNVLAVNKTFCD 463 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 ++GY +F R + +L + Sbjct: 464 ------LSGYSEEDLLNRLPLFLRAERHDRVFYTDLVKQLRDEGRWEGEIWIRHHRGHSL 517 Query: 290 SLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + + + + + + + + A TDPLT N +Q Sbjct: 518 PQWLRIETVEEPENKTTRYVAVSADLSEEKAWEEKMLQLAQTDPLTGSANRVLFRDRLQQ 577 Query: 347 EAGKS---------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 ++ L +D + ++ G + + + L + + + + +L Sbjct: 578 AIKRAQSRKGMEVQVFSLDLDYFKRINDSLGHVAGDRMLIEVAARLKRVSRGQDTISRLS 637 Query: 398 GSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++++ E M + S + + L + + G+ + L Sbjct: 638 GDEFAILVTCLNDEVDATRMAQKMLQAISEPMMIDGAELIITASIGVALYPGDGDDDVTL 697 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 + Q+ + ++ + + + + + +R AL+ +L LY QP + Sbjct: 698 MANADNAMHQAKRQGRSR-MCYFSAELADKAQEYLTIESKLRRALENSELQLYYQPQVDL 756 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDK 570 + + +L + G ++PD+ +P+ + L ++E + + H Sbjct: 757 ATGDIVAAEALLRWHSDELGWVSPDRMIPVAEEGGLIIALGRWIIEECCRTIRGYHRSSG 816 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 +VN+ L+ ++ + + Y I P + LE+TE + ++ ++ L Sbjct: 817 NWFPIAVNVSARQFLEPGFTDELVEIVRFYDIPPSLLELELTESMMLDDVGKAIETMKAL 876 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 GF+IA+DDFGTGY + LK+ +K+D FV D+ + DA I ++ + Sbjct: 877 SFKGFKIALDDFGTGYTSLAYLKQFPVSKLKLDRAFVTDVHRDVNDAAIAEALVTFTRVM 936 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LS+VAE +E Q L+ +G ++ QGYL RP P Sbjct: 937 GLSLVAEGIEESVQHECLNLMGFRFGQGYLFSRPLPKD 974 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 15/153 (9%), Positives = 36/153 (23%), Gaps = 8/153 (5%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYE 235 L + I + +Q+ + TL + + + LL Sbjct: 282 TLIQLVILDITEQYHSQLKLKELQEELERSLDEYRTLFDYSVDGLTVRNLNGELLLCNKS 341 Query: 236 NDFIAGYLVPVFFIIF--TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + + G L + + + + + + + Sbjct: 342 YEEMLGRTFAELNHQHFTKLCDPQEKSALSEKYREALEGKSILFEFTYEHKDGHHFPVEI 401 Query: 294 ILAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQ 325 V+ C+L VR ++R Sbjct: 402 RSIVIDYRGEPCVLTAVRDISERREKDQRLREL 434 >UniRef50_A4JQX8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JQX8_BURVG Length = 913 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 111/554 (20%), Positives = 203/554 (36%), Gaps = 19/554 (3%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + A++ R A ++ + I GY Sbjct: 352 DVTERKNAELALRLRSRALDAIGNGVLITRVEAGEEIV---EYANPAFETITGYTSAQVV 408 Query: 249 IIFTLGVGKLRY---PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 G+ + F + A++ + + + +A + Sbjct: 409 GRDHAGLARAGQQGLLFEQMAQALAAGSAGARLLRSRRADGSAFWGQLYVAPVRDDLTYH 468 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQAPEQEAGKSFCCLRIDNLE 361 + ++ + QA D LT LPN +EQA + + + +D L+ Sbjct: 469 ICVISDLTELIDSRDQLVRQARRDALTGLPNRATLRELIEQAVAERRAFALLFMDVDRLK 528 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G +R + + L + E+ + + G E + +L P+ RL ++ + Sbjct: 529 DINDSLGHGAGDRLLREVAQRLSGCVGEDGTVTRYGGDEFVAMLGRPDDGDRLAALLRRI 588 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 R + + + + + + LL Q+ A ++ + Sbjct: 589 ARALERPVQIGDAQSRVQLSIGVACYPADGLDAETLLKHADLAMYQAKARGRN-TVELFK 647 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 + +++ L + +R AL+ L QP + G + +L + G ++P Sbjct: 648 PSFAEAAERRIALSHRLRAALEHDGFELAYQPQIDVRTSRVSGVEALLRWHDAEMGTVSP 707 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+PL L + VL S+ R SVN+ P L + + R Sbjct: 708 AIFIPLAEDIGLIGQLGEWVLRSVCGQAKRWADTLPALRVSVNVSPRQLASGDFCSVVRR 767 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + LEITE + ++ + L++ G IAIDDFGTGY++ L+ Sbjct: 768 VLDASGLPAHQLELEITEGALVA--PGALPALRALNEIGVLIAIDDFGTGYSSLSYLRTF 825 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 AD +KID FV+ I T+ D I+R+I LA++ VVAE VE Q + L G Sbjct: 826 HADRLKIDMSFVRGIGTHCADEAIIRAILALARSLHFEVVAEGVERPDQLSFLVAEGCPI 885 Query: 716 LQGYLIGRPQPLAD 729 +QGY R P A+ Sbjct: 886 VQGYHFCRAVPAAE 899 >UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains n=1 Tax=Idiomarina loihiensis RepID=Q5QUC0_IDILO Length = 829 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 130/764 (17%), Positives = 264/764 (34%), Gaps = 40/764 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL---IQLSR--FISPLAIIHSSYIFLAWMPLCVMLS-- 54 + +I + ++++ F + + +S ++ ++++ + M + + LS Sbjct: 62 LIVSAVISGVGVWSMHFIGMLAFELHLPMSHSVLLTLISVVPAIVGSFIAMKIQMSLSSV 121 Query: 55 -ILFIFGWRGVVPVLC----GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLG 109 I G + GM + V+ + + Sbjct: 122 RATLIAGTVLGAGIGLMHYTGMAAMEMSAHLRYDPLWFVLSVFVAVSLGIIALLAYRHYK 181 Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 R R Q + + I ++ + F F V Sbjct: 182 KSERTSWFRRRSAQIVVAAIIALAISGMHYTAMIAANFYPTRAPDAVFSGHGNWLAYVVG 241 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 + ++ + R+ AQ+ + + + + Sbjct: 242 IGSCLTAIMAIIASQIDRRLQQQQKLAQMSAEQLYEVISAIDDGLLLFDEHNRVLLANQA 301 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 +D + + + N+ +++ N + T + Sbjct: 302 FTRLTGDDLERIKGSKLNIEDYI---ERSDKLLENIKNSLARRVAWQGKVNVRKRSGTTF 358 Query: 290 SLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + ++ + + V + R A D LT L N R+L + Sbjct: 359 PVRLSISKVRYNQQKERHFVATVTDISAEVESSERIRYLAYNDALTGLANRRSLLDHLQD 418 Query: 347 --------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + ID + ++ G M ++ + L + N L +L Sbjct: 419 QLATYKEAGQNGALILCDIDKFKILNNTLGSDMGDLLLKRVAERLQSSTKANSFLARLSA 478 Query: 399 SELLLVLSGPETEGRL---QHMVNIL------NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 +E +VL+G E + Q ++ + + N+ + A FD ++ Sbjct: 479 NEFAVVLTGLERGNSVNIKQQLLTRIYQLLDQLQQPYQLNSYTHLCSFSAGASLFDDSES 538 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L+ Q S + + + +K+V L +R A+ Q + LY Q Sbjct: 539 NAETLMTQSGLALSHSKRKGTGE-VSLFRQEFADAVSKRVKLEEQLRNAIKQNEFELYLQ 597 Query: 510 PIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 P N + G + ++ + DG ++P F+PL + L + E + L Sbjct: 598 PQVNIESKPTGAEALIRWKQSDGRFVSPADFIPLAEETGLIVPLGYWITERACQILQQWQ 657 Query: 568 C--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +K + S+N+ Q ++ L ++Y I P + LE+TE + S Sbjct: 658 QSPEKAKMQLSINVSAKQFQQPEFVEQVQLLVEKYEIRPHRLKLELTESLLMDDISSVTN 717 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 I+QL + G A+DDFGTGY++ L ++ D +KID FV++++ + A IV +I Sbjct: 718 KIKQLKRLGIEFALDDFGTGYSSLSYLMQIPFDTLKIDVSFVRNMLDSMEKAQIVYTIIQ 777 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L ++ L++VAE VET++Q L +L QGYL +P P ++ Sbjct: 778 LGESLKLNIVAEGVETEEQFNYLARLNCDTFQGYLFSKPVPESE 821 >UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBN5_METSD Length = 782 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 128/763 (16%), Positives = 267/763 (34%), Gaps = 60/763 (7%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV--VPVLCGMFCTNLW 77 L + + ++ + I ++P L L W + Sbjct: 11 LMMSGSAKGVLFGAVTVVMLAIIGSFFVPQP-WLPWLDNLHWTVSSGASFILTWIGYRQA 69 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 + +LG ++ V C ++ +G W + + + + Sbjct: 70 YPEQREPRRWFLLGIGSYFVGQLCWDIQSAIG--WNPFPAPADFFYLMLGPCCILGLLSA 127 Query: 138 CSMYL-------------VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 ++L V + L + + G + L+ +F + + + Sbjct: 128 LKLHLSHAKLTAAKLDMAVMTIAVIGLILLIYLGRQSDSNALQLLVLVFYPAGLLSAACF 187 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 L +V ++ W + + + W + + + + + F A L+ Sbjct: 188 ALL--LVPFLRLRLQWGWLLLLGGLALEGGIWMQWNLNVIDQVNIDGSLLNHVFSASDLL 245 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLC-----LLNYNQNFLQGVETEYSLAFILA--- 296 + + + ++ + + L+ + + ++T +A +A Sbjct: 246 LGLGAMHWMATSSSNHTYIRICQGIQRAIPLMAMLIAISTIYFMMMDTTTPIAKSIALGS 305 Query: 297 -------VLISFSVCLLYMVRIYHRSEWLNR---RWHLQALTDPLTLLPNFRALEQAP-- 344 ++ S+ L R+ + + R+ A D LT LPN + Sbjct: 306 CLSIIALAMVRQSILLAESERLLTAEQLIEEGQMRYQHLAHHDILTGLPNRLLFQDRLTH 365 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + ID+ + ++ G ++ + +I L ++E + +L G Sbjct: 366 ALALSARNNNRVGMLFIDIDHFKNINDSLGHVIGDELLVAIVERLKLRIREQDTFARLGG 425 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNT-GLDMGYGAAWGRFDGNQETLQPL 454 E +L++ + + + L H + + + + + L Sbjct: 426 DEFVLLIEQLQNASEAATIASNLLEALKTPFHLSGNCEVVISASIGISVCPEDTQDATQL 485 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-- 512 + ++ E ++ + ++++ + +R A+ +L+ QPI Sbjct: 486 IRNADSAMYRAKDTGRNR-YQFYTEELTQRAQERLMTESRLRQAIRDKAFVLHYQPIYTK 544 Query: 513 --NK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + ++ + DG ++ PD F+P + L VL+ LA Sbjct: 545 GEDGGAPSIFSCECLIRWQQDDGSLIYPDLFIPCAEETGLIIPIGEWVLDHACAQLAEWD 604 Query: 568 CDKKG--PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +VN+ N + + KR+ I+P +I+EITE + ++ Sbjct: 605 ARLPDNTLSMAVNISARHFCDANFVMTVHEVLKRHAIAPARLIIEITENAVMDRMDIAIP 664 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +E L + G RIA+DDFGTG+++ +LK L +KID FVKDI +T D + SI Sbjct: 665 TLETLVRTGVRIALDDFGTGHSSLAKLKTLPIHALKIDREFVKDIPDSTDDMQLAASIIR 724 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+ L VAE VETQ+Q L + G QGYL+ RP Sbjct: 725 MAQGLHLQTVAEGVETQEQYDFLAQAGCDKFQGYLLSRPVTAE 767 >UniRef50_A1WC44 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A1WC44_ACISJ Length = 737 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 105/550 (19%), Positives = 198/550 (36%), Gaps = 26/550 (4%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP-VFFIIFTLGVGKLRY 260 E+R + + + + +V + + Sbjct: 178 EAERAVRQSEERMRKFAIATEEGLAFHRDGRILDANEALQRMVGYSLAELVGQSIFDFAL 237 Query: 261 PFLNLTWA--VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSEW 317 P Y + + + + +VR + Sbjct: 238 PEYRALAVEYTRRGSEKPYELAMRHKDGRVIPIEVVGKTMPQQEGDYRVVVVRDITARKQ 297 Query: 318 LNRRW----HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + L D LT LPN R L E++ + + +D+ + ++ Sbjct: 298 AQEQAQVQARFLVLHDTLTQLPNRRHLMMQLARMASAAQERQTRAAVLFIDLDHFKTVNE 357 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN----IL 421 G + + R L ++ + + ++ G + +++L + + + Sbjct: 358 LLGNQAGDQLLIEMARRLQDGVKATDFVARVGGDQFIVLLPDLANRAAAAEVADALLARV 417 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + T L + F + + LL + + + E + Sbjct: 418 RAE-FAIGGTPLSLSPSIGISVFPDDGYSPDELLRRADAAMHHTKESGRGTRM-FYEPGM 475 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 GQ T+ + + +R A+ QG L+ QP + G++ ++ G++ PD+F Sbjct: 476 EGQPTELLQQEHLLREAVFQGAFALHYQPQVRVADGRLVGFEALVRWRHPVRGLVGPDEF 535 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLF 597 +PL L VL + L + +VNL + Q+++ G I ++ Sbjct: 536 IPLAESRGLITPIGRWVLREACRQLKAWHDEGLPRVPVAVNLSAIEFRQRDVVGEIAQVL 595 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + ++PQ + +EITE A+ + ++ L G + +DDFGTGY++ LKR Sbjct: 596 QSAGLAPQYLEVEITESALMQQADHTRTTLQALQALGVAVTVDDFGTGYSSLAYLKRYPL 655 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D IK+D FV D ++ D IV +I LA + L VAE VET +Q ALL +LG + Q Sbjct: 656 DKIKVDRSFVTDTPADSEDVAIVTAIIQLAHSLQLQPVAEGVETAEQLALLQRLGCELAQ 715 Query: 718 GYLIGRPQPL 727 G+ I P Sbjct: 716 GFGIAPPMDA 725 >UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Arthrospira RepID=B5VW83_SPIMA Length = 655 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 87/420 (20%), Positives = 161/420 (38%), Gaps = 19/420 (4%) Query: 324 LQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 ++ D LT L N + ++ E L +D + ++ G + Sbjct: 183 YKSTHDGLTDLYNRSYFMRELDEVVERAKEDPEYQFVVLLLDVDRFKIINDSLGHQVGDR 242 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNT 431 + + L + + +L G E ++ ++ + + I Sbjct: 243 LLEGVGERLRECIPPWHTVARLGGDEFAILFDDLNNLTQISQTAQNIQYHLQQPIILGEQ 302 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + + + +L Q+ + + + ++ L Sbjct: 303 EVFSTVSIGIAISNVSYSNGKEILRDADTALSQAKSKGKA-CHVIFNPTMHREAWDRMQL 361 Query: 492 LNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 N +R A+++ +L L+ QPI + E G + ++ G ++P +F+P+ + L Sbjct: 362 ENDLRHAIERQELQLHYQPIISLETLEIIGCEALIRWEHPKRGWVSPSQFIPIAEETGLI 421 Query: 549 ARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 VL S + L K P SVNL L + ++ + + P Sbjct: 422 QPIGEWVLRSACETLHRWQLMFPQGKQPFMSVNLSTYQLTNPQLVNKVQTILEETGCDPC 481 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE AE + + +L + G ++ IDDFGTGY++ RL +KID Sbjct: 482 RLKLELTESTIAEYAEVVVPQMRELSELGIKLCIDDFGTGYSSLSRLYHFPIHTLKIDRS 541 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F++ I + I +I +LA L V+AE VET +Q A+L G Q QGYL + Sbjct: 542 FIEGIDESQDQLKIAYAIVNLAHTLGLEVIAEGVETPEQMAVLQAWGCQLCQGYLFSKAV 601 >UniRef50_Q1NS23 PAS:GGDEF:EAL:Response regulator receiver n=4 Tax=Deltaproteobacteria RepID=Q1NS23_9DELT Length = 989 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 111/583 (19%), Positives = 209/583 (35%), Gaps = 31/583 (5%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF---TLSWLAALSVLLLLL--- 230 LI + Y + + + E+R + V++ L Sbjct: 249 LIRRPGYLYGLPATLEQVAQLRQLQDEQRALRASEERHRLQVAALNASRDGVVITDLEPK 308 Query: 231 --CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 I GY R + ++ + + Sbjct: 309 IISVNPAFTTITGYHEKEVRGKSPSLLKSGHHDRAFYQSMWAQLKQQGFWQGEVWNRRKD 368 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE- 341 Y ++ + + + + R A D LT LPN LE Sbjct: 369 GEVYPELLSISTVYDEAGEPSHYVGVKTDLTNLRRSEERLQHLAHHDHLTGLPNRLLLEA 428 Query: 342 -------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 +A +++ + L D ++ G + ++ + L +++ + L Sbjct: 429 LLEHALERAQREQSRLAVLVLNCDRFRTINESVGYAAGDELLVAVVKRLQSILRAEDTLA 488 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGNQET 450 +L G E LVL G ++ + L + + + + + + +T Sbjct: 489 RLAGDEFALVLEGLGDYREVEFTLQRLWQALEQPFALPDGYEVYIQASVGISFYPQDDDT 548 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL + Q+ ++ ++ + + L +R AL Q + LLY QP Sbjct: 549 VAGLLVRADGAVNQAKDGGGNRCY-YATSTLNEESRRGLELEAALRRALQQREFLLYYQP 607 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 G + ++ + G++ P +F+P + L V++ + L Sbjct: 608 KVALAGGRITGAEALIRWQRPGHGLVAPGEFIPAAERSGLIVAMGAWVIDEGCRQLRRWR 667 Query: 568 CDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 + R +VN+ + + + + ++ + LE+TE S E+++ Sbjct: 668 EEGLGDLRLAVNVSASQFRAPGLVTALKQALAEHRVAAGQLTLELTESMLMSEPEAAIAR 727 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 +E+L G +A+DDFGTGY+++ L R D +KID FV+ IV++ A I SI + Sbjct: 728 MEELKTLGVELALDDFGTGYSSFANLSRFPIDQLKIDRSFVEGIVSSPDAATIAASIIAM 787 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A L VVAE VE Q Q L + G +QG+L +P P AD Sbjct: 788 AHQMRLKVVAEGVENQPQANYLRRNGCDEIQGFLFSKPLPAAD 830 >UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Tax=Chromobacterium violaceum RepID=Q7NXP8_CHRVO Length = 712 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 109/572 (19%), Positives = 207/572 (36%), Gaps = 30/572 (5%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF-------- 238 + L E+R L A ++++ + T D Sbjct: 122 LDLARLKKRLSKLVEEKTESLRLSEQRFRALIEQAPEAIMVYNMDTGRFVDANRQAEKLT 181 Query: 239 ------IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + G + + + + + + + + Sbjct: 182 GRSLQTLVGISPAALYAPEQPDGLPVAESVSMHSEQAQKGDIPPFERIVQRPDGSAIPCE 241 Query: 293 FILAVLISFSVCLLYM-VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------ 345 L+ L S + LL + + + A D LT L N L + Sbjct: 242 VRLSKLPSETGNLLRVSYIDISSRVAAQEKINRLAYFDTLTGLHNQSGLLEQLSALYSLS 301 Query: 346 -QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 Q+ G + + + + +F++ YG + + + + L + + +L G E + Sbjct: 302 WQQPGFAVLLIELGDFKFINDVYGNRIGDLLLCHVAQRLQQAIGPHGHAARLGGVEFAAL 361 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+G + + + S + L + + + L+ + Sbjct: 362 LTGVAGAAEAEAIACRMLDAVSEPFPVDEMMLSVTASIGISLGPEHGADGRELMARADMA 421 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 ++ + EE + Q ++V L ++R A+D G+L+L+ QP + G Sbjct: 422 LYRAKEKS-ARRVQVYEEELGQQMRERVELEKSLRHAIDHGELVLHYQPQIELSTRRVVG 480 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSV 577 + ++ G++ P +F+P+ Q L VL + L + R +V Sbjct: 481 VEALVRWQHPQKGMIPPMRFIPIAEQSGLILPLGRWVLREACRQLKVWQDKGRDDLRMAV 540 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL + + + K +SP+ + LEITE + + S+ +E+ G Sbjct: 541 NLSVAQFTDHELPDFVADVLKETGVSPRHLELEITESCTMLSPQQSIGMMERFRAMGIHS 600 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFGTG++ L R D +KID F+++I + + +I LA L VVAE Sbjct: 601 SIDDFGTGHSALAYLTRFPVDTLKIDQSFIRNISNDEKGTALCDTIAYLAHRMGLQVVAE 660 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VETQQQ L + V +QGYL+ +P P + Sbjct: 661 GVETQQQLTFLSSIHVDVVQGYLLCKPLPAVE 692 >UniRef50_Q3A254 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A254_PELCD Length = 874 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 103/646 (15%), Positives = 223/646 (34%), Gaps = 26/646 (4%) Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 + + L +V I+ + F I T Sbjct: 206 FGRLHSGPSWPSWSEQSTAAPEILLRVVDATRIRARVLFRDIFGVPAAVIGTNLSRDIYA 265 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + ++ +L+ +++ +I +RD + ++ Sbjct: 266 QGLQSIIYFHIWLLVVSLMAGVCILVIWDRLAGSRQRQRDSEHLFQHLFQFSADAFFLCE 325 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + + + + ++ L+ T +ST + F Sbjct: 326 EQGRFVDVNHQSCAVLGFDRQKLLSLSWSDITDAAIGNLLSRTQRLSTAAPVPMEATFTG 385 Query: 284 GVETEY--SLAFILAVLISFSVCLLYMVRIYHRSEWL-------NRRWHLQALTDPLTLL 334 + ++ + + + + R + R + A D LT L Sbjct: 386 NRGRTFVGDVSVTHLEIQDQVLFFVLV-RDITERKAADTMLRKQKARLNYLAYHDVLTGL 444 Query: 335 PNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN + +A +++ + +D + ++ G + + R + + Sbjct: 445 PNRLKAIELLQTYIGRANQRDTMVAVLIFDLDRFKNLNESLGHETGDEILMEVARRIQEM 504 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 +++ + + + G E L++L ++H+ L ++ + + Sbjct: 505 LRDTDVVARFGGDEFLVLLEHVADSTGVKHVAEKLLEAIAQPLRIGEQQFYLTGSIGISL 564 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + E Q +L + ++ + +++ L +R AL+ Sbjct: 565 YPKHGENAQTILKAADSAMYFAKEQGRN-TYRFFIPSINVEVEERLYLETDLRQALNLEQ 623 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 +L+ QP N + E + +L GI+ P +F+PL L VL+ Sbjct: 624 FMLFYQPEFNLHTGKVECLETLLRWQHPKRGIVGPGEFIPLAEDTGLIVPIGEWVLQEAC 683 Query: 561 KWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + + R +VN+ Q + R+ K+Y ++ + + LEITE + Sbjct: 684 RQVIAWREQGLPSIRVAVNISARQFRQSGFIEMVFRVLKQYGLAAEWLELEITESFVIQS 743 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 AE ++ + L + G +A+DDFG GY++ L++ +K+D FVK++V + D I Sbjct: 744 AEHALNMFKVLRQSGISLAVDDFGQGYSSLSYLRKFPFTKLKMDRAFVKNVVNDPHDEAI 803 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +I + + VVAE +ET++Q L LG QGY + P Sbjct: 804 AAAIIAMGDSLGQEVVAEGIETREQLDTLRTLGCPCGQGYYLALPM 849 >UniRef50_C6QG37 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QG37_9RHIZ Length = 625 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 98/483 (20%), Positives = 184/483 (38%), Gaps = 21/483 (4%) Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 W + L + F + ++ + + ++ H Sbjct: 128 QRAWIERHVAALARGETFTHTQHLKSGRIVLVTNKPLEGGGWVDIQEDITERRQAEQKIH 187 Query: 324 LQALTDPLTLLPNFRALEQAPEQEAG-------KSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A DPLT + N +A ++ + + +D + ++ G + + Sbjct: 188 WLARHDPLTEIANRLQFHEALDEALRNLAPSQTLALHWIDLDGFKTVNDTLGHPVGDALL 247 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLS--GPETEGRLQHMVNILNSR---QIHWNNT 431 +S+ ++L +++N+ + +L G E ++ S + + M L Sbjct: 248 KSVAKSLKRAVRKNDIVARLGGDEFAVLQSASRVVRKADAERMAQRLLKEICKPHDLGGQ 307 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + +T + LL ++ A +A + ++ + L Sbjct: 308 QVSCSASIGIAFAPLHGQTAEQLLKAADLALYKAKAGGKGIAF-FYDPDIADDANSRYEL 366 Query: 492 LNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 + +R ALDQ L LY QP+ + E ++ +L G++ P F+P+ + L Sbjct: 367 QSDLRGALDQNQLELYYQPLVDTENRDVIAFEALLRWHHPLRGMIAPADFIPIAEETGLI 426 Query: 549 ARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 L + P R SVNL P+ + N+ ++ + ++P + Sbjct: 427 VEIGEWALIRACQEAVKWPDT---IRVSVNLSPIQFERGNLYQAVVNALRISGLAPHRLE 483 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE + ++ + L G RIA+DDFGT YA+ L+ D IKID FV+ Sbjct: 484 LEITEGVLLRDEINTRAILHNLRTLGARIALDDFGTAYASLSYLRSFPFDKIKIDRSFVR 543 Query: 669 DI--VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 D+ I++++ L K +S VAE +ET Q + G LQG+ P P Sbjct: 544 DLDVGKRKDCEAIIQAVAGLGKQMQISTVAEGIETLDQAQTVTAAGCNELQGFYFSHPVP 603 Query: 727 LAD 729 +D Sbjct: 604 GSD 606 >UniRef50_A0YED8 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YED8_9GAMM Length = 642 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 105/573 (18%), Positives = 206/573 (35%), Gaps = 45/573 (7%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + + + + R F L L+ ++ T ++ I + ++ Sbjct: 68 IELEMQKEALLASREQAEISQSRYFNLYNLSPVA-----YSTLSDSGLIIQSNLTTSVLL 122 Query: 251 FTLGVGKLRYPFLN-----------------LTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + P T+ + T+ + Sbjct: 123 GISTNALYQQPLAQYFIKEDQDKFYLFCKAIQRHKNDTISPCECELQIRRADGTQLWVNL 182 Query: 294 IL--AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 L ++ + A DPLT LPN R L Sbjct: 183 TGIYTQSEDNKPELQIVLNNVTDTHNNIDEIRRLAFFDPLTGLPNRRLLFDRLAHAVTTS 242 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +DN + ++ G + ++ + L M+E++ L +L G E ++ Sbjct: 243 ARTNLYGAVMLLDLDNFKILNDSMGHGIGDLLLQKVSLRLKMCMREDDTLARLGGDEFVI 302 Query: 404 VLSGPETEG-----RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 +L ++ + + + + + + F G+ + LL Sbjct: 303 LLENLSSDEKKAAAQAEVVTQKILVSLVEDYNLQGFVHNSTASIGIVMFKGDDLSFGDLL 362 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q+ A + ++ ++ L N +R L Q + +L Q N Sbjct: 363 KNADVAMYQAKAASRN-TFRFFDPVMQAIAERRTQLENALRQGLVQEEFVLNYQIQTNSN 421 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KK 571 + G + ++ + + ++ +F+ L + ++ VLE+ LA Sbjct: 422 GKTTGVESLVRWINPEYATVSTGEFIALAEETDIIFLLGQWVLETACAQLAAWSQHPTMS 481 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 SVN+ L + + G + ++ +P +ILE+TE + S++ ++++ Sbjct: 482 SWSMSVNVSALQFKKSSFVGNVETALEKSDANPNLLILELTESMLVDDVPSTIEKMKRIK 541 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G R ++DDFGTG+++ LKRL D +KID FV D++ + DA I +I L + Sbjct: 542 SLGVRFSLDDFGTGFSSLAYLKRLPLDQLKIDQSFVHDLIVGSDDAAICETIITLGISLG 601 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 + V+AE VET Q L ++G + QGY GRP Sbjct: 602 ICVIAEGVETADQYECLMEMGCKSFQGYYFGRP 634 >UniRef50_A1K8Z7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K8Z7_AZOSB Length = 691 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 93/434 (21%), Positives = 171/434 (39%), Gaps = 16/434 (3%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLE 361 R+ R R + A D LT LPN + A A L +D + Sbjct: 242 RLIDRLRDERSRAYQLASHDHLTGLPNRLLFTELANSHLSRARRSHAPFVMMFLDLDRFK 301 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + ++ + L ++E + + +L G E +L+L+ + + L Sbjct: 302 RINDTLGHRVGDLLLQEVALRLRQTVRETDIVARLGGDEFVLLLTELDALDDASRVARKL 361 Query: 422 NS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + + ++M + ++ ++ ++ + Sbjct: 362 IEAIGQPMVLDGHEIEMRPSVGIAIHPRDGMDVEAMMRNADSAMYEAKRSGSGR-FHYYD 420 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTP 535 ++ +++ Q+ L R A+ + +L+ QP + ++ + G++ P Sbjct: 421 PSLNSRSSLQLDLNGRFRRAILGNEFVLHYQPRVTLNGFRVTSLEALIRWQHPERGLVPP 480 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRII 594 +F+ Q L V+ + +A + ++N+ P L + I Sbjct: 481 GEFIEYAEQEGLVVELGNWVVREACRQIAAWIAEGLEIVPVAINVSPKQLRDHSFVEVIR 540 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 Y I P + +EITE + E +E L G +IA+DD+GTG+++ LK+ Sbjct: 541 ESVAHYGIRPALLEIEITERCVVEDFERPRAALETLSALGLKIALDDYGTGFSSLSYLKQ 600 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L DIIKID F+ DI DA IV S L L+V+AE VET++Q L G Sbjct: 601 LPIDIIKIDRSFISDIRNARHDAAIVASTIALGHNLGLTVIAEGVETREQVIYLRTAGCD 660 Query: 715 YLQGYLIGRPQPLA 728 +QGY +P P Sbjct: 661 EVQGYYFQKPAPPD 674 >UniRef50_Q1QZB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZB7_CHRSD Length = 831 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 129/773 (16%), Positives = 259/773 (33%), Gaps = 61/773 (7%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFI-- 58 + + + ++++ FT + L + L + S + + + + Sbjct: 57 LLAGAAMMGLGVWSMHFTGMLALRLPLPMHYDAGLTLLSLVPAMLGSGYALRIMAMPRPR 116 Query: 59 FGWRGVVPVLCGMFCTNLWNFHL----SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY 114 + V V+ GM + + ++ +G ++ A + + RY Sbjct: 117 LSYSLVGGVVLGMGIGIMHYLGMEAIRMPVEVRYDIGLFVMSLVVAIGLGAAAMLIHRRY 176 Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 R + I S+ + G + A V S Sbjct: 177 ARQRRLNRLD----HRLVSIAACISLAISGMHYTAMSATYYLPTPTPAPQHAVTPASWLG 232 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 + ++ L + F +R S+ ++ + + LL + Sbjct: 233 VSVSGIVIL--LLMVAGLWVFIDRRLQRHQRQSVMSREQLMEVIAAINDAFLLFDHRGRI 290 Query: 230 LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + + GY + + + ++ V + Sbjct: 291 VLSNRTFSTLTGYTPDEIRNQPLSILEHSHESARTYRDIQRCVVEHGHWQGEIEARRKNG 350 Query: 287 TEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + + + + + + + H A D LT LPN + L Sbjct: 351 EAFPVRVSVNRVDYSQGNVHHFVATLHDLSAHREAQAKIHRLAHHDTLTGLPNRQTLYAR 410 Query: 344 PE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + Q G + L IDN + ++ G + + + R L + L + Sbjct: 411 LDALQAACRAQGPGGALIMLDIDNFKALNDSRGNAVGDTLLLHVARRLKRFARHEHDLAR 470 Query: 396 LPGSELLLVLSGPETE-GRLQHMVNILNSRQ-------IHWNNTGLDMGYGAAWGRFDGN 447 L G+E L+++ + ++ ++ + RF Sbjct: 471 LGGNEFALIVTDLPSAHDDADEALSRHLDTVRQAIGGVYDLDDFTHTTTHSLGGVRFGDG 530 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L+ + S + + + + +V + +R AL L L+ Sbjct: 531 DVSADELVKRASLAMSHAKQEGGNAS-RAFRPEMEQALQVRVCMEAELRQALATDQLQLF 589 Query: 508 AQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G+++P F+PL + L + VL++ + LAT Sbjct: 590 YQPQVDTRGTIIGAEALIRWQHPERGMISPGDFIPLAEETGLIEQIGGWVLDTACQQLAT 649 Query: 566 H--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF------ 617 + S+N+ Q + R++ R+ E Sbjct: 650 WSRHDATSHLQLSINVSVRQFQQADFVSRVLDTIARHRAPA--------ERLTLELTESL 701 Query: 618 --SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 +N E + + +L + G ++DDFGTGY++ LKRL + +KID FV+D++ + Sbjct: 702 LLANVEGVIDKMTRLKQHGLNFSLDDFGTGYSSLAYLKRLPFNTLKIDVSFVRDVLVDAN 761 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DA IV++I LA + L VAE VE Q Q+ L +LG Y QGY GRP P+ Sbjct: 762 DAAIVKTIVALADSLQLKSVAEGVEMQAQREFLERLGCHYHQGYYFGRPSPID 814 >UniRef50_A6Q9W1 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9W1_SULNB Length = 866 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 104/487 (21%), Positives = 188/487 (38%), Gaps = 22/487 (4%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLN 319 + ++S + + EY ++ ++ + + + Sbjct: 252 AEIWRSISEKDYWSGEIINRRKNGEEYMEMLTISAILDDQGKPKNYVALFTDITTKKEHQ 311 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 ++ A D LT LPN L + ID + ++ YG Sbjct: 312 KQLEHIAHYDVLTSLPNRVLLADRLSQALHSSRRNNLVLGVAFIDIDGFKEINDTYGHNT 371 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 + ++ + ++ N+ L ++ G E ++V + + M+ L S I Sbjct: 372 GDDLLITLSSRMKGALRNNDTLARIGGDEFIVVFTDLKKPEDCHPMLERLLQVTSAPIIL 431 Query: 429 NNTGLDMGYGAAWGRF-DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 NN + + + L+ Q Q+ + Sbjct: 432 NNKSMSVSASIGLSIAAPDKEIDADQLIRQADQAMYQAKQSGKNR-YSVFDIEKDSAVNI 490 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + LN I A+D + +LY QP N E G + ++ D G++ P +FLP+I Sbjct: 491 KRERLNQISKAMDNREFVLYYQPKVNMTTGEVIGVEALIRWEHPDHGLLLPGEFLPIIE- 549 Query: 545 FNLS-ARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH-I 602 N+ + V+E+ L + T SVN+ L L Q + R+ L + + Sbjct: 550 NNMISIKLGDWVIETALSQIETWQRQGLDISISVNINALQLQQIDFVSRLEELLSMHATV 609 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 P + LE+ E + + + G R A+DDFGTGY++ L+RL A +IKI Sbjct: 610 DPSLLELEVLETSVIDDITQVSNVMHRCIDLGVRFALDDFGTGYSSLTYLRRLPAHLIKI 669 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D +FV+D++ + D I+ + L+KA V+AE VET + L ++G + QGY I Sbjct: 670 DQIFVRDMLIDPDDQAIIEGVIGLSKAFGRKVIAEGVETIEHAKALLQIGCELGQGYGIA 729 Query: 723 RPQPLAD 729 + +D Sbjct: 730 KAMKASD 736 >UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desulfovibrio RepID=C4XGC1_DESMR Length = 725 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 107/567 (18%), Positives = 201/567 (35%), Gaps = 35/567 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY---ENDFIAGYLVPV 246 + + + EKR L + LLL C ++DF P Sbjct: 145 LRTAVEVALFKHHTEQELRRSEKRYRELFSAMLNAFLLLRHCPGSSQGQDDFEILGANPA 204 Query: 247 FFIIFTLGVGKL-RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----- 300 F +L ++ + + + L+ L Sbjct: 205 FERATSLSNDEIVGHTLRQTLPGIEPF--WIDTLAAVAATGRPVRFENYLSDLNMYFLAQ 262 Query: 301 ----FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQE 347 + + + R + D LT LPN Sbjct: 263 AYSPQPGQVAVALEDVTERKRGEERLRYRTFHDALTGLPNRALCLDRIARAIERAKRRSN 322 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G ++ +R + L +++ + + ++ G E +++L Sbjct: 323 YIYALLFLDLDRFKLVNDSLGHLVGDGLLRRVADRLRREVRQLDTVARVGGDEFVVLLEE 382 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + G +V + + + + + E + LL + Sbjct: 383 IASPGDALRIVKAVRERLRVPFVVDGRQIYVTASLGVVLGPADYERPEELLQNAAIAMNA 442 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDE 521 + + + + + + + + L +R L + + +L+ QPI + G + Sbjct: 443 ARSAGCGR-VRVFDWSMRERAERVMDLETNLREGLVRDEFVLHYQPILDLATRRLRGVEA 501 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVN 578 ++ + DG ++ P +F+P Q L VL + LA +VN Sbjct: 502 LVRWRRVDGELVPPGEFIPAAEQSGLIIPLGAVVLTEACRALARWRAGSLGDSPFFMAVN 561 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L Q ++ +++ +R ++P + LEITE + ES+M + L + G I Sbjct: 562 LSARQFTQPDLVKQVVTALRREAMAPADLKLEITESVLMEHPESAMLKLRGLRELGVSIG 621 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ L+R D +K+D FV + + +IVRS+ LA VVAE Sbjct: 622 IDDFGTGYSSLSYLQRFPIDTLKVDRAFVSGMEE-QGNRVIVRSVVSLAHNLGYDVVAEG 680 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQ 725 +ET Q L +LG QG+L RP Sbjct: 681 IETAAQLDDLSRLGCDMGQGFLFARPM 707 >UniRef50_B6R1T0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1T0_9RHOB Length = 972 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 108/645 (16%), Positives = 217/645 (33%), Gaps = 38/645 (5%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL----------KISTFFGDADAIFTV 166 TS ++RL LG + I V PL F + + Sbjct: 301 TSSQTFERLIVLGFTACLIIFIVALFVSRKMSQPLQRIADALSDVAGGNFDVRVEGTRRM 360 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 ++ + AV + + ++ R+ + + + + Sbjct: 361 DEVGEIARAVKVLQASARERDSLRLNIQRKNKELRKQEQELVKQNTLFDAALNNMSHGLC 420 Query: 227 LL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS-----TLCLLN 276 + L+ D I I T P Sbjct: 421 MFDTQKRLIVFNQRFDDIFACEQGEGKIGMTWDEMVQCMPLAQEFLEAEGENSVAQQHWP 480 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + ++ + + + + ++ A D LT LPN Sbjct: 481 STVRSTFTLTLQSEQVILMTLEPQDGGGWVAIFEDITDRQRISDHLSYLATHDALTKLPN 540 Query: 337 FRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 + + + Q+ + +D + ++ G + + + + L + Sbjct: 541 RLLMNERLQEMKQAALEQDEHFGILWMDLDEFKTINDSLGHAVGDKLLVHVAKILREKVT 600 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 E + +L G E ++ P + +L+ + + + + + F Sbjct: 601 NKEMVARLGGDEFAILSKLPASREQLEQLAKEVLKVVASPCFLEGHEIVVAASVGIAMFS 660 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ Q+ E+ ++ + ++ L+ + A +L Sbjct: 661 REHQNVDELIRFADLALYQAKNDGRN-TFRFFEDDMAAKIKQRQTLITDLYKATANRELE 719 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 +Y QP N E G++ +L G ++P +F+PL + L VL+ Sbjct: 720 VYFQPQVNLATGEISGFEALLRWNHPRYGFISPFEFIPLAEETGLILEIGAWVLDEACSL 779 Query: 563 LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 A P +VNL P + + + + + R + P + LE+TE ++ Sbjct: 780 AAGWPKR---VNLAVNLSPRQIYCEQLLPVVDDVLARTGLDPGRLELEVTETVLLADHLR 836 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + +L K G +I++DDFGTGY++ L+R D IK+D FV + + IV S Sbjct: 837 VRQTLAKLQKSGVKISMDDFGTGYSSLSTLRRFPFDRIKVDRSFVMSMSKDEDAYFIVNS 896 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + DLA + ++ AE VE+++ L + G QGY G+P P Sbjct: 897 VIDLANSLGIATTAEGVESKEIAEQLKREGCTEAQGYYFGKPAPP 941 >UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 Tax=Proteobacteria RepID=A6V697_PSEA7 Length = 858 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 117/723 (16%), Positives = 237/723 (32%), Gaps = 32/723 (4%) Query: 24 LIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSF 83 L +S ++ + + + L V + Sbjct: 122 YAMLEGELSGRSLADALNADTGDILRAARQAALDEAAISRYVDFGGAPAILVASAIKPTS 181 Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 + L + +V +L L Y L L + Sbjct: 182 DHAPIDLAKASVLVFLD------RLTPEKLAKLGGDYGIANLHLLAGGAAGDKESLALEG 235 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 + + + + A L++ L + Q + +R Sbjct: 236 TPHRLAWVSSRPGSAMLRETALPLLGIFVVAAGLLFW-LSRSALLNAHAVDRQQKVLKRS 294 Query: 204 IAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVP--VFFIIFTLGVG 256 E+R +++ A+ + + + GY + + L Sbjct: 295 NQALQASEERFKSIAEAASDWIWEVDARFVFTYLSTRFREVTGYQPAAWIGRRLDELLGS 354 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRIYHRS 315 L + +F + + + + V Sbjct: 355 DTVNIVKWLEGLPDVGTPSSLVCSFRDELGQARIGKLTATAIRNGAGDGYRGTVADITDE 414 Query: 316 EWLNRRWHLQALTDPLTLLPNFR----ALEQAPEQE---AGKSFCCLRIDNLEFMSRHYG 368 + + + D LT LPN LE+ ++ + + L +D + ++ YG Sbjct: 415 VEAHAKIQHLSQHDALTGLPNRNKLFGFLERQLAEKAGKSPLAVLMLDLDRFKPINDQYG 474 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 + +I L ++ + + +L G E ++V + ++ L R+ Sbjct: 475 HPAGDAVLHAIAERLRASTRDLDMVARLGGDEFVVVSVHVTSRLEVEKFCIRLIEVINRE 534 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 I + +G + + + LL ++ A E + Sbjct: 535 ILHDEQVFHVGASIGVALASEHGDDPRALLRCADVAMYEAKAAGRN-TWRFYSEAMDFHL 593 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ +R AL +G+ LY QP + ++ G++ PD+F+ L Sbjct: 594 AEKKQREAELRAALQRGEFELYYQPRYRTEEGSIASAEALIRWHHPRRGMIGPDEFIGLA 653 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + +L + VL A+ P + SVN+ P + +I ++ + H+ Sbjct: 654 EESDLIVQIGNWVLRQACSSAASWPGE---VMVSVNVSPAQFISGDIVWQVREALRLAHL 710 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + + LE+TE ++ + ++ + L + G R+ +DDFGTGY++ L+ D IKI Sbjct: 711 DARRLELEVTENVMLNDVDGALRTMTALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKI 770 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F+ ++ D IV++I +L A +L V AE VET+ Q +L LQG+L+ Sbjct: 771 DKRFIANMEKTGRDRSIVQAIINLGNALNLRVTAEGVETEGQMRILRDEKCHELQGFLLS 830 Query: 723 RPQ 725 RP Sbjct: 831 RPV 833 >UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BZW1_DELAS Length = 1120 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 126/754 (16%), Positives = 238/754 (31%), Gaps = 52/754 (6%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN 78 + I +S +S +F M + V+L+ L WR + ++ Sbjct: 321 LWRLNFIPVSTALSWTERAQPLVLFALGMLVSVLLASLAAAWWRRHPSSWAQLRASSRSM 380 Query: 79 FHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC 138 A+ + VV A R +T Q L + Sbjct: 381 RESDARFQALFEQAAVGVVQIDAANGNVLHVNRRYCDITGHEAQQLCQRPLL---ALVAA 437 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 L SL L + L + + +++ Sbjct: 438 ETVEGDRLLLQELAAGQRRALQIERQLRRSDGSLVWVELHISALGHGPSLRLMALVQDIS 497 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVPVFFIIFTLGV 255 R + + L + +L + +F+ + G Sbjct: 498 ARRHLQQMQRDGSRHLRMVIQRLPLGLAMLQEDGRFAYWNEEFMRLAGHGATAGMDGDGW 557 Query: 256 GKLRYPFLNLTWAVSTLCLLNY-----------------------NQNFLQGVETEYSLA 292 + P + + S++ Sbjct: 558 WRNMCPDEARRQRMQRRFEAAQARARVAQSPHGSESDSCGTLNSEEYQLIGSDGCARSVS 617 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------ 346 +L L +++ + + A D LT LPN R L +Q Sbjct: 618 IGGMLLDE---GCLLILQDQSQRKTAEEEIRRLAFYDALTGLPNRRLLVDRLQQALASSR 674 Query: 347 --EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +DN + + GL + +R I L + L + G + +++ Sbjct: 675 RRGRCGAVMLLDVDNFKAFNDSLGLELGDVLLRMIAERLAQSLGREATLARHSGDDFVVL 734 Query: 405 LSGP--ETEGRLQHMVNILNSRQIHWN------NTGLDMGYGAAWGRFDGNQETLQPLLG 456 L ++ + + + + F + + +L Sbjct: 735 LEDLGKDSMHAASKLEGEVQRMRSLLLQPLQLSGQSCHITLSIGASLFGEQELSADEVLR 794 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKE 515 + Q+ L + + + + +R L + +LY QP N Sbjct: 795 RAEMAMYQAKGMGRN-TLQFFDPQLQAVLRSRTAMEQEMREGLVRSQFVLYYQPQVANGR 853 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGP 573 G + +L G++ P F+ L + L + VL + LA + Sbjct: 854 IVGAEGLLRWNHPREGLVPPSLFVSLAEETGLIQQLGEWVLGEACRQLAQWAAEPDMACL 913 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ P Q ++++ K + +P+ + LE+TE ++ + + + L Sbjct: 914 MLAVNVSPRQFHQARFVEQVLQALKEHGANPRLLKLELTESLLLADVDDTAAKMATLKAH 973 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++DDFGTGY++ LKRL D +KID FV+D++++ DA I R+I L + L Sbjct: 974 GVGFSLDDFGTGYSSLAYLKRLPLDQLKIDRSFVRDVLSDPNDAAIARTIVALGTSLGLQ 1033 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 V+AE VET+ Q+ L QGYL+ P P+ Sbjct: 1034 VIAEGVETEAQRQFLEDQHCHAWQGYLLSPPVPV 1067 >UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 Tax=Comamonas testosteroni RepID=D0IZ49_COMTE Length = 1115 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 105/531 (19%), Positives = 199/531 (37%), Gaps = 23/531 (4%) Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 W + + + V ++ + L S + Sbjct: 565 WWERMFPDAAERERVIQRWEVAKAQARRTLQLRQSERVDDVQAQWDELATEASACTVSAQ 624 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 +A + + L +++ + + A D LT LPN Sbjct: 625 TLMLSGVDGLRRPVAVSAVL---QAEGCLMVLQDQSQRMAAEQEVRRLAFYDALTGLPNR 681 Query: 338 RALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 R L +Q + L IDN + + YGL ++S+ + + L+ Sbjct: 682 RLLADRLQQALAVAQRKAHFGGVVLLDIDNFKAFNETYGLDQGDLLLQSMSQRIRGLLPS 741 Query: 390 NEKLYQLPGSELLLVLSGP--ETEGRLQHMVNIL------NSRQIHWNNTGLDMGYGAAW 441 + + G + +L++ ++ + I + Sbjct: 742 GATIARQGGDDFVLLIEDLGSDSVAAAARLEQQADQWLSRLREPIEIGGIPRSITVSMGL 801 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + T + + + Q+ + ++ + + ++ L +R L Sbjct: 802 SLFGEPELTGEEVQRRAEMAMYQAKSQGRNVS-CFFDPQLQSALQERRTLEQDMRAGLQA 860 Query: 502 GDLLLYAQPIRN-KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 G+ L+ QP + G + +L + G + P F+PL + + VL++ Sbjct: 861 GEFELFYQPQVEMGKVIGAEGLLRWKHPEKGFVPPAHFIPLAEETGVILPLGDWVLQAAC 920 Query: 561 KWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + LA SVN+ P Q ++++ + + + LE+TE S Sbjct: 921 QQLAKWAKHPRYAQLVLSVNVSPKQFHQSGFVEQVLKALAEHGADARRLKLELTEGMLVS 980 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + ++ + +L +G ++DDFGTGY++ LKRL D +KID FV+D++T+ DA Sbjct: 981 DVDDTIAKMMRLKSYGIGFSLDDFGTGYSSLSYLKRLPLDQLKIDRSFVRDVLTDPNDAA 1040 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I R+I LAK+ SL V+AE VETQ Q L + QGYL+ P P+++ Sbjct: 1041 IARTIVALAKSLSLHVIAEGVETQAQCRFLEGIRCYAWQGYLMSPPVPVSE 1091 >UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Methylobacterium RepID=B1ZGT4_METPB Length = 574 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 113/534 (21%), Positives = 188/534 (35%), Gaps = 30/534 (5%) Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + LA ++V LLLL F + G+ L A +L Sbjct: 32 FAAALAEMAVPLLLLDAAGTITFANACAAALLACPAPAGL-PLPALLAACGAAEPEGGIL 90 Query: 276 NYNQNFLQGVETEYSL---AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + V + +L A+ S A +PLT Sbjct: 91 PEALRAARPVRSRLTLGDRLVEAALAPLSSGGFALTFEDVTELLRGAA----LARQEPLT 146 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 L N L +A + L +D + ++ G + +R + L Sbjct: 147 GLCNRVGLHDRLDAALAEAARTDAPLAVLMLDLDRFKAVNDTLGHPVGDALLRKVAERLR 206 Query: 385 PLMQENEKLYQLPGSELLLVL----SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 + + + +L G E ++ SG E + + L R + L++G Sbjct: 207 KATRSGDVVARLGGDEFAIIQGGPSSGAEQPQAAEALARRLVDLVGRTYVVDGHMLNVGV 266 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + LL ++ A E ++ Q + L +R Sbjct: 267 SVGVALSPADGRNADDLLKHADLALYRAKAEGRG-THRFFEPAMNAQMQARRSLEIDLRR 325 Query: 498 ALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL L QP + G++ +L + G ++P F+PL + L Sbjct: 326 ALALKQFDLAFQPQIQLETGQIVGFEALLRWNHPERGPVSPALFIPLAEEIGLIVGIGEW 385 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + + A +VNL P+ + ++ + + + P + LEITE Sbjct: 386 ALRTACREAAGWTQ---PASIAVNLSPVQFRGGRLVETVMHVLAQTGLDPARLELEITEG 442 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 N +S + + L G +I++DDFGTGY++ L++ D IKID FV+ + N Sbjct: 443 ALLENTDSVLDVLNGLRALGVKISMDDFGTGYSSLSYLQKFPFDKIKIDQSFVRGMEGNA 502 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IVR+I L + + AE VET Q + G +QGYL GRP P A Sbjct: 503 ECGAIVRAIARLGASLGMRTTAEGVETATQLDAIRAEGCTEVQGYLTGRPMPAA 556 >UniRef50_Q3IEF5 Putative uncharacterized protein n=3 Tax=Alteromonadales RepID=Q3IEF5_PSEHT Length = 751 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 97/550 (17%), Positives = 192/550 (34%), Gaps = 25/550 (4%) Query: 202 RDIAPSLGKEKR---AFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTL 253 RDI+ E+R ++ + L+ + G + + Sbjct: 178 RDISQLKLTEERLNLFAKCVESLTDALAIYDKNFKLVDINPSFLTLFGGVREQYLKKDFN 237 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVR 310 G + + V L + + + + + + Sbjct: 238 LPGYDKSYINTIKKTVYQRDSLQQEVKLRNSAHVLLPIEISIDEIRNDQNQITNYVVVYS 297 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----EAGKSFCCLRIDNLEFMSRH 366 + + H + D T LPN ++ + + +DN + ++ Sbjct: 298 DLTERKKAESQLHNLSNRDRTTNLPNRNLFFTDLQKLGQLNSHHALLVFDLDNFKKINDS 357 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G + + + L L +EN+ Y+L G E LV+S + + Sbjct: 358 LGHQLGDSLLAKLAMRLNKLTRENDVFYRLGGDEFALVMSDTNDIYTITRTAKQFLAAIA 417 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 L + F + T + LL + + + ++ Sbjct: 418 TPFKMAGHELAITSSVGIVLFPEDGNTPELLLKNADTAMYHAKKKG--NSYLFFNDTMNR 475 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 + K++ + N +R L + +Y QP N + G + ++ + GI++P F+P Sbjct: 476 EAVKRLQIENLMRFGLKENHFAVYYQPKMNIHTGKLVGMEALVRFITPKKGIISPGVFIP 535 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + VL + + R +VNL ++ RI + ++ Sbjct: 536 IAEETGQIIEIGEVVLNKACRDVKEWLDAGLFNGRVAVNLSAKQFSLPDLTTRIDVILQK 595 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + + LEITE + + ++ + L G +A+DDFGTGY++ LK+ + Sbjct: 596 NALPSYFLELEITEGTVMDDPKDAIAIMCSLSARGIHLAMDDFGTGYSSLAYLKQFPLNT 655 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +K+D F+ D+ N +V SI +A L VVAE VE Q +L +L + +QGY Sbjct: 656 LKVDKAFIDDM-KNERGRNMVDSIVTIAHNLDLHVVAEGVEQASQIEILKQLNCETVQGY 714 Query: 720 LIGRPQPLAD 729 +P + Sbjct: 715 YYSKPLSKDE 724 >UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclassified Gammaproteobacteria RepID=A4ABI7_9GAMM Length = 654 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 123/581 (21%), Positives = 225/581 (38%), Gaps = 32/581 (5%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 L + R+ + + ++ A + + L+ L+ + Sbjct: 62 AATLTIAIYRISSTLRYKKMSEEAREASARRWYREMMLGVLLSGLAWGAAGYLLYDPRNM 121 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + L+ G F+ + LL + L +E L ++AVL Sbjct: 122 LNQSLLAFVIAGMCAGSIVSLSAFIEASATFLATSLLPFTLRLLVEGSSETGLMAVMAVL 181 Query: 299 ---------ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 ++ ++ + + + QAL D LT LPN R L+ Sbjct: 182 YLIMMTAFARRVNLTVIGGLEMTYLRSKAEDTIERQALFDELTGLPNRRLLQDRLGQALA 241 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + L +D + ++ G + I R L ++E + +L G E Sbjct: 242 RAKRNNTQAALMFLDLDFFKRVNDSLGHSAGDELLVEIGRRLSDFLREADTAARLGGDEF 301 Query: 402 LLVLSGPE--TEGRLQHMVNI------LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 +L+L+ E +E + + I+ + + + + Sbjct: 302 VLLLTDIEGGSEHVVSVVRRRGETLRQAVEAPINIKGNEVHITVSIGVSLLPDDTNDVDD 361 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD-LLLYAQPIR 512 LL ++ L + ++++ + +R ALD + L LY QP Sbjct: 362 LLKHADTAMYRAKDDGRN-TLRFFVPEMQASLSQRMDMERQLRGALDADEGLELYLQPQY 420 Query: 513 NKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 E G + ++ Y+G + PD F+P+ L R V+E+ + A + Sbjct: 421 TDEEAICGAELLIRWQ-YEGSFVPPDVFIPVAEDSGLIYRLGDWVIENACRIGAGLKDEL 479 Query: 571 KG--PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + ++N+ P QKN + +I +R+ + + LE+TE + + ++ + Sbjct: 480 RDREFSLAINVSPRQFRQKNFSEKIFEAMERHELPRGLIELELTEGLLIEDVDDTVSKML 539 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L + G R +IDDFGTGY++ LK L D +K+D FV+D++T+ DA IVR+I +A+ Sbjct: 540 SLREQGVRFSIDDFGTGYSSLRYLKSLPLDTLKVDQSFVRDVLTDPGDASIVRAIVSMAR 599 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET++ + L QGYL RP PL D Sbjct: 600 TLELEVIAEGVETKEVRDFLISANCLRFQGYLYSRPLPLDD 640 >UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXD5_MARAV Length = 709 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 96/585 (16%), Positives = 207/585 (35%), Gaps = 32/585 (5%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA---FTLSW 219 + V + F + I ++ R + + L+ Sbjct: 102 PYWVHTYCTPVDGADGVEPGFVVIQTNISDRKNSERGLRIAASVFDRSHEAIVITDHLNH 161 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 + ++ + + + R + ++ ++ Sbjct: 162 IIDVNPAFSRITGYSRQEVLG------LNPSILSSGRHSREYYRSMWQSIEKTDHWRGEV 215 Query: 280 NFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + EY ++ + + + + A D LT LPN Sbjct: 216 WNRRKNGEEYVELLSISRVHLEEPGKHYYVAAFSDITALKNHAKELDRAANYDDLTGLPN 275 Query: 337 FRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 + LE+ Q+ + C L +D + ++ G +R + L ++ Sbjct: 276 RQLLEERLRSAKAHADRQKRSLAICYLDLDGFKGINDELGHDFGDEALRMVAERLTRSLR 335 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 + + ++ G E +L++ G + + + + S + +++ + Sbjct: 336 SGDTVARIGGDEFVLLIQGDHS----EPLYQRILTSVSEPFELADKEVNLTASLGVTLYP 391 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ + + ++ L I AL+ + Sbjct: 392 EDDTDAEGLVRHADQAMYAAKEKGRNQ-FHIFDPGQYAFRKERRNQLMEISRALENEEFE 450 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + + ++ ++ + G++ P FLP +A +L VL+ + Sbjct: 451 LYFQPQLRMADCQVIAFEALIRWNHPEKGLIAPGAFLPAVANSHLEIPLGQWVLKEAIHQ 510 Query: 563 LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAE 621 + + S+N+ L+ + + + + +SP + LE+ E A + + Sbjct: 511 MNRWREAGEALAVSINISAPHLMDRKFVDYLEGYLQSHPEVSPGQITLEVLESTALEDTK 570 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + + + G ++A+DDFGTG+++ L+ L D+IKID FV++++T+ D IV Sbjct: 571 RASNVLARCQSLGLQVALDDFGTGFSSLTYLRTLPVDVIKIDQSFVRNMLTDANDRAIVE 630 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 S+ LA+ V+AE VET A L +G +QGY I RP P Sbjct: 631 SVIFLAQRFDHPVLAEGVETMDHAAALRDMGCNLVQGYGIARPMP 675 >UniRef50_A5IAE9 Sensory box protein, GGDEF family protein, LssE n=5 Tax=Legionella pneumophila RepID=A5IAE9_LEGPC Length = 741 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 102/563 (18%), Positives = 197/563 (34%), Gaps = 31/563 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---CTPYENDFIAGYLVPVFFIIF 251 F L ++ +L++ L Y + F+ + +P I Sbjct: 171 FLNQLVEERTESLQQSFSLLRATIESSSDGILVVDLQGKIVDYNSQFVKLWNIPESIIKK 230 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYN----------QNFLQGVETEYSLAFILAVLISF 301 +L Q + + Sbjct: 231 ETSEPQLIQYMSTQLLNSEQHAQHVKEFSIHIDDSSMQIYHFRNGKVVECCSKPHRVGLQ 290 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 +V ++ R L + QA D LT LPN L + + Sbjct: 291 TVGRVWSFRDITEQTRLKEKLEYQATHDALTNLPNRLLLIDRIEHAISGYARHKMKFAIL 350 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 +D + ++ + ++ L L+++ + L +L G E +++ +E + Sbjct: 351 FFDLDRFKMINDSLSHEAGDQLLCAVAERLRSLVRKEDTLARLGGDEFVMLFQSFNSEEQ 410 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + H +++ + + +T+ LL Q+ Sbjct: 411 IAGVAQKILKSFQKPFHIAERDINIHVSIGISVYPTDGKTVNTLLSNADMAMYQAKFRGG 470 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 E ++ +T +Q L ++ A+ + L QP E + ++ Sbjct: 471 NQ-FSFYTEKLNKKTNQQFQLELDLQKAIVHHEFFLLYQPQFTVNTHEIRSMEALIRWNH 529 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQ 586 GI+ P F+P L VL K + R + N+ L Q Sbjct: 530 PQKGIILPLDFIPTAESSGLIVPIGEWVLRETCKQIGAWRTMGLPEIRVACNVASKQLRQ 589 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ + L K Y + P + LEITE + I++L G I +DDFGTG Sbjct: 590 RDFPAMVEDLLKEYSVEPHCLELEITENVIID--KEIQRTIKKLKSLGVLIILDDFGTGN 647 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK++ D +KID F+++I + D I+ +I +A++ + +++AE VETQ Q Sbjct: 648 SSLNLLKQVAVDSLKIDQSFIQNISKSPGDEAIIDAIIAIAQSMNFNIIAEGVETQNQLK 707 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K +QG+L+ +P P + Sbjct: 708 FLKKRRCNDIQGFLMSKPIPPEE 730 >UniRef50_B8DMV5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Desulfovibrio vulgaris RepID=B8DMV5_DESVM Length = 663 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 103/555 (18%), Positives = 190/555 (34%), Gaps = 49/555 (8%) Query: 210 KEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV 269 + A SW A ++ + I GY + F G + +P W Sbjct: 112 ADHLADWESWEDADGKVVFVT---PACQRITGYSLESFRANARFIEG-IMHPEDLPLWRK 167 Query: 270 STLCLL------NYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNR 320 + E LA L + + R + + Sbjct: 168 HREMVASGAEMVEVEVRVRTQDGRERWLACTSRRLHDAEGTSQGVRFSGRDVTDRKIMLT 227 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMM 371 + QA DPLT LPN ++ + L +D + ++ G Sbjct: 228 QMKHQAWHDPLTGLPNRALCLDRIDRSLHRARRGVDNVCAVAFLDLDRFKVVNDSMGNSA 287 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 +R + R L + + + +L E +L+L +E V + + Sbjct: 288 GDQVLREVARRLAENTRTIDTVSRLGSDEFILLLDEVRSEEEALITVQRICTSLEPPLEV 347 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + +L + H + + + Q Sbjct: 348 AGRQIRISASVGVVM-NRGGGNADEMLRNANIAMHHVKEHGGD-GMAVFQPSMLEQAMNL 405 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L + ALD + L QPI ++ G++ ++ D GI+ P +F+P+ Sbjct: 406 MQLEIDLHRALDNNEFFLVYQPIMSLHDRRLTGFEALVRWNHPDRGIVGPSEFIPVSEST 465 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPR---FSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + VL + LA + R VNL L Q + ++ + + + Sbjct: 466 GQIHQVGHWVLAEACRALAAWREQQPSMRSVIMHVNLSARQLSQPGLVEQVAAVLRETGL 525 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + + LE+TE N + + + +L + G R+ IDDFGTGY++ L++ D +K+ Sbjct: 526 PARCLKLEVTETMLMENPDYANLVLRRLKEIGVRLCIDDFGTGYSSLSYLQQFPIDTLKV 585 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLS--------VVAEFVETQQQQALLHKLGVQ 714 D FV + IV+++ LA + L ++Q+ +L +L + Sbjct: 586 DQSFVARMCREPGHFKIVQAVVALAHSLGLDVVAEGVEE--------EEQRIMLSELSCE 637 Query: 715 YLQGYLIGRPQPLAD 729 QGYL RP P D Sbjct: 638 GGQGYLFSRPVPGED 652 >UniRef50_A3YH84 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YH84_9GAMM Length = 1052 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 96/487 (19%), Positives = 195/487 (40%), Gaps = 19/487 (3%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSE 316 + +++ + + ++ + I ++ + + + + Sbjct: 539 QAYRSMSVDLKNVGKWQGEMEYITLSQQSQPGWVIATSVLDENGQISHFVASFSDISKLK 598 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + A D LT LPN L Q +Q+ + L +D + ++ G Sbjct: 599 RSQHKLQHLAHHDALTGLPNRTFLTQKLSGMISNARKQDKQLAVAFLDLDRFKNINDTLG 658 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + +R I + + ++ENE + ++ G E +L+L + L + L Sbjct: 659 HLFGDKLLRVIAQRMYNQLKENEVVARIGGDEFILILDPSDGLEALSARLEALNQKIQEM 718 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 ++ + + + + + + L + + +S Q Sbjct: 719 VYIDGKEIMTCASIGVSLYPEDGTSSELLFQHADTALYSAKEAGRAM-HKLYASSLSIQA 777 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ + + + AL+ ++ L QPI + ++ + +L G + PDKF+P+ Sbjct: 778 KERLDIESHLAKALEYKEMSLVYQPIYDFKQQKFVKVEALLRWNTPKLGQVPPDKFIPIA 837 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + VLE+ + +A R +VN+ + + ++NI + + Sbjct: 838 EETGGILTIGNWVLETACRTMAQWQQASCQIQRIAVNVSRIQIARQNIFETVKEILILTQ 897 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 PQ + +E+TE + ++ + + QL +FG I+IDDFGTG ++ LK L +K Sbjct: 898 CKPQWIEIEVTESAIMNLSKEGLKQLTQLKEFGVSISIDDFGTGQSSLSSLKTLPVSTLK 957 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D+ N D I R I ++K ++ VAE VET +Q +L +G QGYL Sbjct: 958 IDKSFVQDMPENENDVEIARLILQMSKVLNVRSVAEGVETTEQAQVLKSMGCDLCQGYLF 1017 Query: 722 GRPQPLA 728 +P Sbjct: 1018 SKPLSEE 1024 >UniRef50_C6XCZ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ3_METSD Length = 776 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 114/758 (15%), Positives = 235/758 (31%), Gaps = 96/758 (12%) Query: 14 FTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFC 73 + + + L ++ A+ P F W + LCG+ Sbjct: 58 LAVCLAWMTFFLIVYGLRKALVWVYKRTPVHAYPPG-------FWLNWFRALSGLCGIAW 110 Query: 74 TNLWNFHLSFLQ-TAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS---RYVWQRLFWLG 129 F + +C A++ + Y R FW G Sbjct: 111 GLSGIFLFYPHDTAHQAFLTLALAGVCGGAVMAYATDKPTAYAFAGGLILLGLPRFFWGG 170 Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 + + ++ L + S + V+ +++ + I M Sbjct: 171 NHFSMLMAVNLLLFILYVTI---ASFKLANRLRENIVLRIMAHESQEAINAMA------- 220 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 ++ + + SW AA + ++ + ++ + Sbjct: 221 ----QRQKLHIDHTPLAVIEWDVNFRVTSWNAA----AEHIFGYPPSEAMGRHMSFIVPP 272 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY-- 307 + + + ++ + ++ + + + ++ Sbjct: 273 DGQMMAQDIMSKLTH------EAGGQHWQHDNVRRDGRVIHCEWFNTAIKNDQNRIIGFA 326 Query: 308 -MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 +++ + A D LT LPN R L + Q + +D Sbjct: 327 SLIQDETAYKKAQDEIERLAYFDALTNLPNRRLLMERLSQALNNSRSSHRIGGLMFIDLD 386 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ--- 415 N + ++ G ++ + LL ++ ++ + ++ G E +L+L + Sbjct: 387 NFKTLNDSRGHAFGDLLLKEVAARLLRAVRNHDTVARIGGDEFVLLLEDIGRDESAAIQT 446 Query: 416 --HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + S N F ++ +L + ++ Sbjct: 447 ASQIAEKILADISLPFDLGNYKHQCSASIGICMFYRQGMHVEEVLKRADAAMYETKRAGR 506 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKY 528 +E + + L N +R AL G LY QP + G + +L Sbjct: 507 N-NYRFFDESMLPVIDSRASLKNDLRFALSLGQFELYYQPQVDGELRTTGAEVLLRWHHP 565 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQ 586 + G++ P +F+PL + + VL+ L R SVN+ + Q Sbjct: 566 ERGMVPPGEFIPLAEESGMIIPIGNWVLQQACMQLGKWSHHAKTSQLRLSVNVSAMQFGQ 625 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG--- 643 + ++ + + ++LE+TE N + + ++ L G +++DDFG Sbjct: 626 ADFVEQVRHALLESGCNEKLLVLELTESLVIQNIDDIVSKMQALKSIGVSLSMDDFGLGY 685 Query: 644 --------------TGYANYERLKRLQADIIKIDGVFVKDIVTNT---LDAMIVRSITDL 686 KID FV++I N A+IV++I + Sbjct: 686 SSLSLLLRLPLDSL-----------------KIDQSFVREIQDNAPKNDSAVIVQTIVAM 728 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 K L V+AE +E QQA L ++G QGYL GRP Sbjct: 729 GKNLGLDVIAEGIEEPYQQAFLEQVGCHAYQGYLYGRP 766 >UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=Bacteria RepID=B4SHZ4_STRM5 Length = 710 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 132/679 (19%), Positives = 247/679 (36%), Gaps = 42/679 (6%) Query: 89 MLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFD 148 L + + +V + + R W G +GI ++ FD Sbjct: 9 WLVAISLLVAVMASYTALAMAGRTVTAPGKGAAWWWRLGGGFAMGLGIWSMHFIGMLAFD 68 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF--------YYLTRMIVSPHFAQILW 200 P+ + + S+F L+ L ++ + Sbjct: 69 LPIPLGYDLPITLLSLALAIASSVFALWLVSLRTLPHPRLAGGALLMGTGIAGMHYVGMA 128 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + P + + S + A++ L + + LG+ + Sbjct: 129 AMRMQPGIDYDPGWLLFSLMVAVAASWTALYVAFRLRAQRTRVGDRLAAAGLLGLAIVGM 188 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRI--------- 311 + + A + ++ ++ + +V L+ Sbjct: 189 HYTGMAAARFPEGSICGAAVGDGLQSEWLAMLVVVLTVAILAVVLVVSWLDQRVEAQLLR 248 Query: 312 ------YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + AL DPLT LPN L++ + + + + + Sbjct: 249 LRNSLLSTSLTDAQQELTQAALHDPLTRLPNRLLLQRRIVQALAEAEQGGSRFAVMFMDL 308 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ YG + ++ L++ N+ L +L G E +LV+ E + L + Sbjct: 309 DGFKQVNDAYGHQAGDALLVAVAERTRQLLRPNDMLARLGGDEFVLVVR-IEHDEDLPTL 367 Query: 418 VNILNSR----QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + L + + + + L+ Q+ A Sbjct: 368 ARRILQAVGSGPL-LADNELQVTASIGVAICPDHAASERQLMAFADAAMYQAKESGRN-A 425 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + ++ +Q LL +R A+ L L QP ++ G + ++ + Sbjct: 426 FVLFADWMNDSAEQQFRLLADLRRAIGSEQLFLNYQPKIRVATQKVAGAEALIRWRHPEH 485 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNI 589 G++ PD+F+ L + L+ L SVNL P+ ++ Sbjct: 486 GLIPPDRFIRLAERSGAINDIGRWALDQACLQLRRWHDAGHEGWSMSVNLSPVQFSSPHL 545 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + + +RY+I+P+ ++LEITE + ++S+ ++ L G I+IDDFGTGY++ Sbjct: 546 LQDVREVIERYNIAPRHLVLEITESTVMRDTDTSLRLLQALSALGVGISIDDFGTGYSSL 605 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL A IKID FV+D+ + D +IV +I L A + +VAE VET Q+A L Sbjct: 606 LYLKRLPATEIKIDHAFVRDLEHSAEDVVIVSAIVALGHALDMDIVAEGVETAAQRAYLE 665 Query: 710 KLGVQYLQGYLIGRPQPLA 728 +LG YLQGYL+GRP A Sbjct: 666 RLGCDYLQGYLLGRPVDAA 684 Score = 58.1 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 25/299 (8%), Positives = 73/299 (24%), Gaps = 19/299 (6%) Query: 3 VEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW 61 + + I+++ F + + + + S + +A + L L Sbjct: 46 LGGGFAMGLGIWSMHFIGMLAFDLPIPLGYDLPITLLSLALAIASSVFALWLVSLR---T 102 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRW--QLGTRWRYGLTSR 119 + G + ++ A M + + W + Sbjct: 103 LPHPRLAGGALLMGTGIAGMHYVGMAAMRMQPGIDYDPGWLLFSLMVAVAASWTALYVAF 162 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIS--------TFFGDADAIFTVVDLLS 171 + + +G + +VG + GD + L+ Sbjct: 163 RLRAQRTRVGDRLAAAGLLGLAIVGMHYTGMAAARFPEGSICGAAVGDGLQSEWLAMLVV 222 Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS-----VL 226 + T ++ +L V ++ ++ + L+ +L Sbjct: 223 VLTVAILAVVLVVSWLDQRVEAQLLRLRNSLLSTSLTDAQQELTQAALHDPLTRLPNRLL 282 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 L + G + G ++ + + + + + L+ Sbjct: 283 LQRRIVQALAEAEQGGSRFAVMFMDLDGFKQVNDAYGHQAGDALLVAVAERTRQLLRPN 341 >UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=cellular organisms RepID=A9BW89_DELAS Length = 947 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 98/430 (22%), Positives = 171/430 (39%), Gaps = 15/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 E RR A D LT LPN L EQ + + +D + ++ Sbjct: 493 EREQARRRIRQLAFYDGLTTLPNRSLLLAQAEQALSVASHEGHELAVVFIDLDRFKQVND 552 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM--VNILNS 423 G + S+ + + ++ + +L G E ++VL + + + Sbjct: 553 SLGHPAGDRLLCSVAQRIQAELRTGDIAGRLSGDEFVIVLPHCGGAQAAEVIERLQSALG 612 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 ++ L F + ++ LL + Q+ + L ++ Sbjct: 613 EPCMIDDVSLASTASCGIAVFPADGRDMETLLHRADMAMYQAKSGGRGL-YSFFSPEMNR 671 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 ++++L +R AL G L L+ QP + G + + + G ++P +F+P Sbjct: 672 LAQERLVLETALRDALRSGGLRLHYQPQLDLKDGRLYGVEALARWSHAEFGEISPARFIP 731 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L L + L SVNL P + ++ I + Sbjct: 732 LAEECGLIGELGTWALREACRQLGEWRSRGIDVPAMSVNLSPTSFHNLDLPRMIADTLEH 791 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + PQ + LEITE +M ++ +H G R+++DDFGTGY++ L+RL Sbjct: 792 NALKPQDLTLEITESLLLDTNPGTMRTLQAVHSQGVRLSMDDFGTGYSSLSYLRRLPVSE 851 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +K+D FV D+ + + +I + ++ L+VVAE VET Q +L + G QGY Sbjct: 852 LKLDRSFVADLENDEAAQALSNAILGIGRSLHLTVVAEGVETAAQNTILREQGYPVAQGY 911 Query: 720 LIGRPQPLAD 729 L RP P AD Sbjct: 912 LFSRPLPAAD 921 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 13/135 (9%), Positives = 27/135 (20%), Gaps = 14/135 (10%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV--PVFFIIFTLGVGKLRYP 261 +A L+ L+ + I GY + L P Sbjct: 89 QQALWSTLDKAMALAEFTPEGRLM---RANANYEAILGYPTSGAEGLLHSDLCTQAHADP 145 Query: 262 FLNLTWAVS--TLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRS- 315 W ++ + + L A ++ +L + Sbjct: 146 DAYGRWRQRWGAGETISRVGEHRRRDGSTCWLEATYAPVLDTQGALSHVLCIATDITARV 205 Query: 316 ---EWLNRRWHLQAL 327 +L Sbjct: 206 QADRRRQEHLRRLSL 220 >UniRef50_A5VGA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGA6_SPHWW Length = 813 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 117/758 (15%), Positives = 233/758 (30%), Gaps = 46/758 (6%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW 61 L + I+ F + I + + + L + + Sbjct: 50 LTMAGLTAGLGIWATHFIAMLGYDP---GIVMGYHVQQTVVSLLVVLAGATAGLFIATRA 106 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVV----LCACAILRWQLGTRWRYGLT 117 + L + +L A + + A A+ Sbjct: 107 PHWLGSLLAASVMGGGVTAMHYLGMAALEMPALIRWKADYVAASAVFAIVPLVLALPLAL 166 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + + + + + F + + L A Sbjct: 167 RGRSLAKGAAAAGLITAAVVLLHFTGMTAITLIPSRGEFSPLSMMSPRAMSLWIFLAASC 226 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---Y 234 + + + R + G + + + L + Sbjct: 227 TIALTAAAAITSRRTGIKLRRQERENQLRVQGMKAQLDLALENMHQGLCLYDGDGRLLLW 286 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRY----------PFLNLTWAVSTLCLLNYNQNFLQG 284 F+ Y + + + VG++ + + + Sbjct: 287 NQRFLDLYGLGSDALQCGMTVGQVIRTGIANHLPVTEVEQRAAEIERNLNQALSASGDAP 346 Query: 285 VETEYS-LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 +EY + + + + R AL D LT LPN R Sbjct: 347 AISEYPGVVVSVRSRALPDGGWVSTFDDITQQRRSEERIRHLALHDGLTGLPNRRRFNDV 406 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + +DN + ++ G ++ + L ++ENE + + Sbjct: 407 VDRDLDVTARAGSRLGLVVVDLDNFKDINDSRGHSAGDQALKMVAAALKDAVRENEHVAR 466 Query: 396 LPGSELLLVL---SGPETEGRLQHM---VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 L G E + E + + + +N+ N L + + + + Sbjct: 467 LGGDEFAAAILYREDYELADFVTRLSTGLAAINAG----NAHDLSVHASLGIATYPADSQ 522 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L ++ + E+ + Q ++ L +R A +G++ + Q Sbjct: 523 DREQLCNHADLAMYRAKGTVGER-ICYYEKGMDEQARERRQLAADLRGAAARGEMTILYQ 581 Query: 510 PIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P R+ GY+ +L G++ PD F+P+ + VL + A Sbjct: 582 PQRSLKDDRVNGYEALLRWTHPKRGLVPPDIFIPVAEETGEILALGEWVLRQACEEAARW 641 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 G ++NL + L Q ++ + + ++P+ + LEITE ++ +++ Sbjct: 642 ---GDGLTVAINLSAVQLSQASLPESVAQTLLETGLAPRRLELEITETAIIADKPRALHI 698 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + +L G IAIDDFGTGY++ + L D IKID FV I+R++ L Sbjct: 699 LRRLKAMGIAIAIDDFGTGYSSLDTLNSFPFDKIKIDKSFVIGSEERPQARAIIRAVLAL 758 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 + + V+AE VET LL G +QGYL GRP Sbjct: 759 GHSLGVPVLAEGVETSGHVDLLVAEGCDQVQGYLFGRP 796 >UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73380_SYNY3 Length = 732 Score = 603 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 170/435 (39%), Gaps = 18/435 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEF 362 + + QAL D LT L N L Q E + + + +D+ + Sbjct: 290 IKLRKASQNQLSYQALHDTLTGLANRALLLQRLEFAGHQIKNNPKSRFALLFIDLDHFKL 349 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ +G + + I L ++E + +L G E ++ L + + + Sbjct: 350 INDSWGHSVGDALLIKIAEKLQINLRETDLAVRLGGDEFVIFLESITEIKQAIDVAERIL 409 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + L + + + L+ Q+ + + Sbjct: 410 IHLRLPVQIQAKELFVKASIGIVIGSIHYYEPERLIRDADIAMYQAKNNGRNQ-YAVFDP 468 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPD 536 + +++ L + R AL+Q L LY QPI + +G++ ++ + G + P+ Sbjct: 469 SMHQTILERLSLEHDFRKALEQETLELYYQPIISLVNDRLQGFEALIRWQHPEKGYINPE 528 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLLQKNIAGRII 594 + + + + L +++ + +A S+NL P + + I Sbjct: 529 QLIAIAEETGLIIILGQWIMQQACQQIAQWREITNDDKIYVSINLSPNQICRPLFVEEIE 588 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + A++LEITE + E ++++ G +I+IDDFGTGY++ L R Sbjct: 589 NILQTTKLDGDALVLEITEGVLIQHLEIVAECLKKIKSHGIKISIDDFGTGYSSLSYLYR 648 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L + +KID F+ I ++ IV++I L + VAE VET Q LL K+G Sbjct: 649 LPVNYLKIDRSFINQITEDSPSQSIVKTIITLGDLLDIQTVAEGVETNDQLNLLKKMGCG 708 Query: 715 YLQGYLIGRPQPLAD 729 QGY P + + Sbjct: 709 LGQGYFWSEPMTVRE 723 >UniRef50_Q21YJ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21YJ3_RHOFD Length = 765 Score = 603 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 135/665 (20%), Positives = 236/665 (35%), Gaps = 31/665 (4%) Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 + Q +++ A+L Q + + L G V + L Sbjct: 91 ASRQMHGTVQQNLMVRHLALLDAQAHVLASSDVDGVALDSWLPA-GFVAQALAQPMSELS 149 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 S S + D + + L + VS +I R Sbjct: 150 ISAPVVNFASSERVIYFGRPIKLADNSRVLAVAEVQVSLLNAILSQGVSISGLEITLERG 209 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 L E L W LS L + T + A L I+ Sbjct: 210 DGQLLSSEPAQEQL-WGTQLSPPLGQVGTQKQVLRGAARLSGQAAIVLAQPTLYRDIFIA 268 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW---LNR 320 + L +NF+ GV ++L + + + L Y+ R+ + Sbjct: 269 ASIPIDAVLANWREQRNFILGVSLLFALMILAS----GGLALWYLERLAQARQAIASSKA 324 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMR 372 A DPLT LPN R L + + L +D+ + ++ G + Sbjct: 325 EIEQLAFFDPLTNLPNRRLLMDRLQHALSANARSGRCGALLFLDLDHFKTLNDTLGHEVG 384 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-RLQHMVNIL-------NSR 424 ++ + + L ++E + + +L G E +++L + + ++ Sbjct: 385 DLLLQQVAQRLKTCLREQDTVARLGGDEFVVMLEDLAEHSLEAAALARRIGEKILASLNQ 444 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQ-ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 F+ T LL Q Q A L + + Sbjct: 445 PYVLMTQTYRSTCSVGAALFEATTPITAADLLKQADIAMYQVKARGRND-LCFFDPQMQA 503 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPL 541 T L + ++ AL +G+ LY QP + G + ++ L G++ P +F+ + Sbjct: 504 SITAHAQLEDDLQAALVRGEFALYYQPQYQLQEGVVGAEALIRWLHPLRGLVPPVEFIAV 563 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + L + L VL + + LA D + +VN+ Q + ++ + Sbjct: 564 AEESELINQIGLWVLRTACQQLARWQGDPRACDLHLAVNVSARQFRQPDFVAQVSTVVHE 623 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 I P + LE+TE N ++ + +L G R ++DDFGTG ++ L RL + Sbjct: 624 SGIKPHLLKLELTESLVLDNVMDTIAKMNELKDLGVRFSMDDFGTGQSSLSYLTRLPLNQ 683 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV++I D +IV++I +A++ LSV+AE VET QQ L G QGY Sbjct: 684 LKIDQSFVRNIGLQATDDVIVQTIIGMARSLGLSVIAEGVETPAQQEFLALHGCTLYQGY 743 Query: 720 LIGRP 724 L G+P Sbjct: 744 LFGKP 748 >UniRef50_C6WT76 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT76_METML Length = 865 Score = 603 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 124/664 (18%), Positives = 235/664 (35%), Gaps = 39/664 (5%) Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM---YLVGSFFDFPLKIST 155 I+ + Q + + ++ P+ I SM + GSFF L Sbjct: 192 LLAWIILFVCVELIIVSAVPDLNKQFILSMFVILPMLIWASMSFGLVGGSFFVIILSSIA 251 Query: 156 FFGDADA-------------IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 + + +++L +L+ + L ++ R Sbjct: 252 VWVTSQGSGNFYSHDLSEGVFSLWTFMVALVVTMLLISALQSERNLAHMTIQKNDKKLRS 311 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 I + + L + + + D + + + + Sbjct: 312 VIDGAFDAIVTIDSAGLLVEFNPAAERIFGYKKEDVLGKSMPDLIIPARYRNAHHAGHQQ 371 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRR 321 +T V+ + ++ +E+ + L L ++ L+ VR + + Sbjct: 372 YKMT-GVTHIFNQRIELVGMRADGSEFPIELTLTALKDNNLSLVTGFVRDISEQKRARQE 430 Query: 322 WHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 A D LT LPN R L + + + +D + ++ G + Sbjct: 431 IENFAYYDALTSLPNRRLLADRYQHAMSIAQRAKTYCALLFIDLDKFKVLNDTKGHDVGD 490 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GRLQHMVNILNSR---Q 425 + + + ++ + + +L G E +++L + ++ + L + Sbjct: 491 QLLIEVAHRIQHTVRAGDTVARLSGDEFVVILESLDQNASIAYQQVSEIAQKLLAELNRN 550 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + F+ N T + L S +++ Sbjct: 551 YYLSLFEFATSASIGVTLFNDNALTFEDHLRHADTAMYLSKDSGGN-TYRFYDQLTQESI 609 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 K L + AL +L L QPI N K+ + +L G ++P +F+P+ Sbjct: 610 EKNFALEAALGLALANQELYLNYQPIVNVAKQVVAAEVLLRWSHPTLGNVSPVEFIPIAE 669 Query: 544 QFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + NL + VLE + L T + SVN+ L N + + R Sbjct: 670 KSNLIIKIGHWVLEQACEQLKTWEASPVLGQIKLSVNISAKQFLYINFVQELREILARTG 729 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I+P + LE+TE N + ++ I L + G RIA+DDFG G+++ LK+L IK Sbjct: 730 INPSLLKLELTETAVIDNMDDVIHKIGILRQMGVRIALDDFGIGHSSLVYLKKLPVTQIK 789 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV D++T++ DA I++ + + K +VAE VE +Q LL + G Y QGY Sbjct: 790 IDQSFVHDVLTDSNDAAIIQMVLAVGKTIHCDIVAEGVEQVEQFELLREFGCDYFQGYYF 849 Query: 722 GRPQ 725 RP Sbjct: 850 SRPV 853 >UniRef50_B9MF12 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Comamonadaceae RepID=B9MF12_DIAST Length = 630 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 108/559 (19%), Positives = 208/559 (37%), Gaps = 19/559 (3%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + I S + A G L + + + Y N + G + Sbjct: 58 FLQRIGSLRAGTLERAAMDAAPDGIVLADRQGRILMVNAPM--ETISGYTNAQLCGQSID 115 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + + + + + + + + ++ + L + + Sbjct: 116 LLVPVHARPEHGQHMQRYHQSPSRRPMGMGR-DLWLQRRDGSQVPVDIALGHSSAHGGTV 174 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLR 356 + VR L R H QA D LT L N Q EQ + L Sbjct: 175 VAFVRDVSDLRRLEARMHYQATHDTLTGLLNRWKFGQRLEQAIAEQAAAQSPPFALLLLD 234 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D+ + ++ YG ++ + R L + + L +L G E ++L G + + Sbjct: 235 LDDFKAINDGYGHAAGDQVLQEVARRLRGALGTGDILARLGGDEFTVLLPGVACATQAEC 294 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L L+ G + LL + Sbjct: 295 VAARLMQALCVPCRVQGFELNFGASMGIALCPQDAGDAATLLRYADMAMYHAKHRGRA-N 353 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + + +++ L + ++ AL G L L+ QP G + +L Sbjct: 354 FAFYAPSMGRKMAEKIQLHDRLKLALAYGGLTLHYQPQVEVATNRMVGVEALLRWHDPQL 413 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G ++P++F+P+ L V+ + + +A R +VNL L Q ++ Sbjct: 414 GEVSPERFVPVAEATGLILELGAWVMAAACRQIAAWERQGMRLRVAVNLSAQQLRQTDLV 473 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ R + +H+ P+ + LE+TE +A ++ E + + +L G +A+DDFGTG+++ Sbjct: 474 EQVARNLRTHHVPPELLELEVTESEALADPEQACQVLNELRALGVAVALDDFGTGHSSLA 533 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL IK+D F++++ + D +VR++ LA L VV E VET++Q L + Sbjct: 534 YLKRLPVSHIKVDREFMRNVPASGGDTTLVRAVVALAHTMGLRVVVEGVETREQLQFLRE 593 Query: 711 LGVQYLQGYLIGRPQPLAD 729 + QG+L + D Sbjct: 594 MQCACYQGWLFAKALSPDD 612 >UniRef50_Q0KC83 Predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains n=3 Tax=cellular organisms RepID=Q0KC83_RALEH Length = 1124 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 101/525 (19%), Positives = 173/525 (32%), Gaps = 23/525 (4%) Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 WLA + A + + L Sbjct: 583 WLAERPAGPAGAAVLPAPQWYASRSAMARHPQARWLDAGGIRTVFAFPLSRGHVSLGVVE 642 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + + + + + L A D LT LPN Sbjct: 643 LYSRSKRSPDTHALAMASGIANQTGHFLL-------RRQAEENLRFIANHDALTGLPNRL 695 Query: 339 AL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 +A + +D + ++ G +R + L ++E Sbjct: 696 MFKAEFEQALTRARASGQALHVIFVDLDEFKVVNDTIGHNAGDIVLREMADRLRGSLEEV 755 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGN 447 E + + G E +++L L + + + N + L M F + Sbjct: 756 ELITRFGGDEFVVLLDPKGDSTILDRTIARIQAALAPGFVVNESELRMTASIGISSFPED 815 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 Q LL + +S +++ + + + AL+Q + +LY Sbjct: 816 GSDWQTLLKHADLAMYGAKQLGKN-GYQFYCRGMSASLQRRIDMESHLHRALEQDEFILY 874 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + + ++ + G++ P F+P Q L + A Sbjct: 875 YQPRIALASGACTAVEALIRWRHPELGLVMPGDFIPFAEQSGAIVEIGAWALREACRQNA 934 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 R SVNL K++ II ++ + + LE+TE +AE + Sbjct: 935 AWRAQGLPPVRVSVNLSARQFADKSLRLTIIDALRQAGLPGNLLELELTESMVMRDAEQA 994 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + +L + G R+AIDDFGTGY++ L R D +KIDG FV+ I + D I ++ Sbjct: 995 SSWLSRLKRTGVRLAIDDFGTGYSSLAYLSRFPIDTVKIDGSFVRYIPESRSDTQITSAV 1054 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L L VVAE VE + Q L + G +QGY P P A Sbjct: 1055 IGLGHRLGLEVVAEGVENEVQLEFLRREGCDEVQGYYFSHPLPPA 1099 Score = 44.2 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 45/190 (23%), Gaps = 8/190 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL---TRMIVSPHFAQILWRRD 203 F G + +V + L +VL+ + + R + R Sbjct: 340 IAFAADAKAISGPQRYLPGLVVISGLIISVLLGWLAYALSSSRARAVAVADQMTHSLRDS 399 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCT-PYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 A ++ A W L + + G + + G Sbjct: 400 QAALAEAQQIAHLGDWRIDLDQDIAHFSQEMARLLGLRGDKPTPEALFQAIDAGHRAVLR 459 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNR- 320 + A+ + + L I + +L + + + Sbjct: 460 ERMRTALQDRQPFEFECPYRSRRGRRGWLHLIGHAHGAPDSAVLRGTAQDISQRRSAEQA 519 Query: 321 --RWHLQALT 328 + H AL Sbjct: 520 RTQEHQIALH 529 >UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1L5_DESAC Length = 1018 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 112/552 (20%), Positives = 204/552 (36%), Gaps = 27/552 (4%) Query: 202 RDIAPSLGKEKRAFTL---SWLAALSVLLLLLC-----TPYENDFIAGYLVPVFF---II 250 RD+ +L E+R + A ++++ C I+GY Sbjct: 442 RDVTEALAAERRLKLITKVFENTAEAIIVTDRCNQIIEVNQAFISISGYSRGEVLGQNPR 501 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLY 307 F + + + EY + + Sbjct: 502 LLQSDHHDGAFFAQMWKQLIDTGHWEGEVWNRRKNGEEYVSWVTIDTIRDHDGSIKNFFS 561 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-------GKSFCCLRIDNL 360 + + + R+ H A D LT LPN + Q E+ + L ++ Sbjct: 562 ISSDISQIKEAERQLHQLAYFDTLTGLPNRVSFAQKLEEHLTTCDEACNLAVMVLDLNAF 621 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G ++ ++ L ++ + ++ G E +L L + Sbjct: 622 KLINESLGPVLADKLLQMFSERLTLCSYDDSFVARIGGDEFAFILRKQRVRSLLDELFEC 681 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + ET+ LL + + E++ Sbjct: 682 V-EAPFVIGAQRVSLTTSVGIAVAPDDGETVSELLKNANIALYSIKDIRRN-SFSYYEQV 739 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 +S + +++ L +R A+D G+ LY QP N + G + +L G++ PD+ Sbjct: 740 MSDRVIERMSLAEMLREAVDNGEFELYYQPKINLKDGMVVGAEALLRW-HSRDGMVPPDR 798 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+P+ Q L VL + + VNL P + + + Sbjct: 799 FIPIAEQTGLILPIGEWVLLQACEQAHIWRQEYPEFHMGVNLSPAQFDLDYLPRLVADIL 858 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 K + +A+ LEITE + ++++ + L G I+IDDFGTGY++ L RL Sbjct: 859 KEAQLPAEALELEITEGMIIEDIDNTVQILRSLRDLGVEISIDDFGTGYSSLSYLTRLPL 918 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 DI+KID F+ ++ + +V SI LA++ +L V AE VET+ LLH Y+Q Sbjct: 919 DILKIDRSFMFEVPDSRDSTNVVLSILALARSLNLKVTAEGVETEDHVTLLHDHRCTYIQ 978 Query: 718 GYLIGRPQPLAD 729 GY RP P+A+ Sbjct: 979 GYFCSRPLPVAE 990 >UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AF7_DECAR Length = 1094 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 94/447 (21%), Positives = 163/447 (36%), Gaps = 21/447 (4%) Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSF 352 L MV I + + QA D LT LPN G + Sbjct: 635 RQAHHLAMVAI--ERNRIEAKLKYQASFDALTGLPNRSLFYIRLRDEMLRAARTGHGGAL 692 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D + ++ G + + ++ ++ + +L G E ++VL Sbjct: 693 LFIDLDRFKEVNDSLGHESGDSLLVEAAERIRAQVRASDLVARLGGDEFVVVLPDVRAPE 752 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 L + + + + + + E LL + Sbjct: 753 HLGLLAQAIVDALVVPFVLDGHQAYVSASVGIACYPQDAEDADILLSCADKAMYVAKELG 812 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 E + ++ L + +R+AL G LLL+ QPI + + +L Sbjct: 813 RN-GFCFFTESMQTSADYRLKLSHDLRSALADGQLLLHYQPIVEVESGRVVKAEALLRWR 871 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK----GPRFSVNLMPL 582 G++ PD+F+ L + L V + + SVN+ P Sbjct: 872 HPQRGMVPPDQFIHLAEETGLIHAIGDWVFQQAALTARDWAARMPAGAADCQISVNMSPR 931 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 ++ + K + P+ + LEITE + G +I++DDF Sbjct: 932 QFVKDGSEAGWLDYLKSIGLDPRYIGLEITEGLLLDERLHVAERLAAFRASGIQISLDDF 991 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY+ LK+ D +KID FV+D+V+++ D I +++ +A L VAE VET Sbjct: 992 GTGYSAMAYLKKYPIDYLKIDRTFVRDLVSDSGDRAIAQAMIFMASQLGLKTVAEGVETA 1051 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q+ LL G +QGY RP P + Sbjct: 1052 EQRDLLQSFGCDLIQGYYYARPLPRDE 1078 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 72/304 (23%), Gaps = 7/304 (2%) Query: 17 AFTLTVVLIQLSRFISPLAI-IHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 TL LI + ++ AI H FLA P L G++ T Sbjct: 60 HATLLAWLIGMQAIVAGRAIQAHRLKGFLASAPGRERLHAWIRHFSYGLLLAGLHWGGTA 119 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + A+ L V + +IL L + + + Sbjct: 120 FLFMSPENVSAAMFLLLVLTGVAASASILHTSLPATAVPFIALVLIPVAVRMYAFENVGS 179 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 L + ++I +D L A I + + Sbjct: 180 YASVAVLGFLLLLWAAARRGHRMLWNSIAVGLDNERLQHA--IMADKLAAEGALRAAAQE 237 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 Q ++ + + R +A + + + I + Sbjct: 238 YQEVFAHITDGLILIDVRDDASFRVAGANAAMAQIVGVPVESAIGKTFGELVEPELASQA 297 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 ++L + + S+ ++ ++ + R Sbjct: 298 EANYRRCVDLGDPIHYESEFRRSGVVRHFD----SMLVPMSDGAGRVFRVIGIHRDITER 353 Query: 316 EWLN 319 + L Sbjct: 354 KQLE 357 >UniRef50_Q1NLX3 GGDEF:EAL n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NLX3_9DELT Length = 775 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 96/429 (22%), Positives = 176/429 (41%), Gaps = 16/429 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSR 365 E + QA D LT LPN + Q + L +DN + ++ Sbjct: 332 EVEQAMEQLRHQATHDLLTGLPNRELFQDRLRQATRRAAKEERPVAVLQLDLDNFKAVNN 391 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 ++G +R I R L + ++ + +L G E +++L + M + + Sbjct: 392 NFGHAAGDEVLRFIARRLQQALADDCTVGRLSGDEFVILLPNIKECRESAEMARQILAAL 451 Query: 425 --QIHWNNTG-LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + +T + +G F + + + LL + Q+ + Sbjct: 452 ETPVSTPHTPNITVGGSVGIACFPDDGKDDKTLLRHVEMAMYQAKKAGRG-TYAFYAREL 510 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 + + ++L + ++TAL + L L+ QP + G + +L + G + PD+F Sbjct: 511 NQRHQDDLVLHHKLKTALAENQLELHYQPKVAMNDGRIIGVEALLRWHDKELGQVGPDRF 570 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ L VL + + LA + + +VNL P Q ++ R+ + Sbjct: 571 IPMAEATGLIVPLGDWVLNTACRQLAAWYAAGRELKMAVNLSPQQFRQPDLVNRLANILA 630 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + LEITE A N ++ + L G +A+DDFGTG+++ LK L Sbjct: 631 ATGAPAHLLELEITETAAMENFAATSRQLHNLSDLGLTLALDDFGTGHSSLAYLKSLPIS 690 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ D+ + +IVR++ +A + L VAE VE+++Q L + QG Sbjct: 691 QLKIDRSFISDLTFEENNRIIVRAVLSMAASMELETVAEGVESEEQLDFLRQHHCTSYQG 750 Query: 719 YLIGRPQPL 727 +L R P Sbjct: 751 WLFARALPA 759 >UniRef50_Q31JB1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JB1_THICR Length = 697 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 102/577 (17%), Positives = 210/577 (36%), Gaps = 28/577 (4%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLLL 229 L+ + Y + ++ + A L K + L Sbjct: 118 INWSLLSQRVKYAINSSLIEDQLRTSQSQLMYAQKLAKLGYWEWDTKADQVTGTGSAFEL 177 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 P + D + + + A + + L + Sbjct: 178 FGIPNQADVTLEQFFSNIIPKDLPLIQQ------AIADASQGYNDIQVSFRVLHHDNSLS 231 Query: 290 SLA---FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + + + + R Q+ D LT L N + Sbjct: 232 HVDCLGEVSFDEHGDISRITGSAQDISRLHKAETLIDYQSSHDKLTDLANRSFFNKNLAN 291 Query: 347 -------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + L ID + ++ + G +R++ + L + +E++ + +L Sbjct: 292 FIKEANPKKYSATVILDIDRFKKINDNLGQENGDALLRTVAQRLKKVTREDDFVARLGSD 351 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +++ E L ++ + S+ + + L + + + + + L+ Sbjct: 352 EFAILIKNTEDAQELNLSLSRIFHDISKAFNVKDQELFITFSIGISIINQDGDQASELIA 411 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK-- 514 + Q+ + ++ ++ +Q++L N +R ALD+ ++ +Y QP + Sbjct: 412 HANIARSQAKLKGGNQ-FLFYQAEMNAESKEQLMLENDLRKALDRNEIEVYYQPQIDGHS 470 Query: 515 -EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG- 572 + G + ++ GI++P F+P+ + VLE+ +K + Sbjct: 471 LKPYGAEALVRWKHPTEGIISPGIFIPMAESNGMIVDIGRFVLENAIKEAEKWHAEGFDE 530 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VNL N+ + + + + + + LEITE A SNA+ ++ ++ L Sbjct: 531 MRIAVNLSGRQFSSSNLIKEVQEVLQNTTLPAKYLDLEITESLAMSNADHNISILKGLKA 590 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++IDDFGTGY++ L D IKID F+ ++ + IVR+I +A + SL Sbjct: 591 MGVSLSIDDFGTGYSSLAYLHSFPIDAIKIDRSFIDNL-ESQEGQAIVRTILAMADSLSL 649 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE +E + L QG++ G+P P D Sbjct: 650 KVVAEGIEEEFHVTFLQNKNCDIFQGFMFGKPMPAGD 686 >UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Sphingomonas RepID=A5VDE7_SPHWW Length = 887 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 117/724 (16%), Positives = 226/724 (31%), Gaps = 40/724 (5%) Query: 29 RFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAV 88 ++ + + ++ PL ML + Sbjct: 70 LWLLGRPALGGAGFWMIAAPLLAMLVAG--------GAIRLVARRGKGATAPERMHGFVA 121 Query: 89 MLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFD 148 +LG + R+ L + L LV ++ L Sbjct: 122 LLGLVQGFGWSVWLLASATGLAPSRWALAAVAHGGLLVVTTLVFAPVPTAALALWLCLAI 181 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 + + ++ + + I + R + A Sbjct: 182 AATVALGPWAVLALLVPLLAVAVVMLG-GISERSYVASRRWLARAAVALKA----SLLLG 236 Query: 209 GKEKRAFTLSWLAALSVLLLLLC--TPYENDFIAGYLV---PVFFIIFTLGVGKLRYPFL 263 E+ W L+ + A L+ ++ G G Sbjct: 237 EFEESGRGWFWETDDRGLISYISPQIAAALGLAADRLLGTPMTGLVLHEAGDGAGSGAGE 296 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNR 320 L + + L Sbjct: 297 RTLGFHLATRLAFSEIAVRAAGDDVRWWSLSGRPAFDEYGNFLGFRGSGTDLTEMRRSEA 356 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMR 372 A D LT LPN + + ++ + L +D + ++ G + Sbjct: 357 EVKRLASYDSLTGLPNRILMRRTLDESLRDIAGRPKRAALFMLDLDRFKMVNDTLGHPVG 416 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN 429 +R + L ++Q++ ++ +L G E +VL G RL + + + S+ + Sbjct: 417 DALLRQVAVRLQRVVQQDGQVGRLGGDEFNVVLPGIVERNRLATLASAIIQQLSQPYLID 476 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 + +G + T L+ + A E + + Sbjct: 477 GAHVSIGASIGIAIAPDDGATADALVRNADLALYAAKADGKG-VHRFYEPEMHASAKDRR 535 Query: 490 LLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 LL +R + + L L QP+ + ++ ++ G ++P F+P+ + Sbjct: 536 LLEMDLRGVMSESGLHLVYQPVVDAGSEAIVCFEALVRWDHPTRGAVSPSDFIPVAEEIG 595 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 L + VL + A P R +VN+ P+ ++ G ++ + P Sbjct: 596 LIPQIGEWVLRTACLEAANWPD---PVRVAVNISPIQFANPSLPGIVLSALAAAQLPPHR 652 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE ++ ++ +L G R A+DDFGTGY++ LK+ + IKID F Sbjct: 653 LELEITEGVFLNDDAATDAMFARLKAIGVRFALDDFGTGYSSLGYLKKAPFNKIKIDQSF 712 Query: 667 VKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 V+ +A I+R+I LA++ + AE ET + AL+ LG ++QGY+ GRP Sbjct: 713 VRGAAVPGNRNAAIIRAIVALAESLEMETTAEGAETPDELALIRSLGCSHIQGYIFGRPM 772 Query: 726 PLAD 729 + Sbjct: 773 LSDE 776 >UniRef50_Q1YPY3 PAS:GGDEF protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPY3_9GAMM Length = 873 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 108/551 (19%), Positives = 208/551 (37%), Gaps = 40/551 (7%) Query: 210 KEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYL---VPVFFIIFTLGVGKLRYP 261 +E R +++ + ++++ L I GY + + Sbjct: 326 EELRISAITFNSQDAIIITDADLRTLRVNQRVVDITGYSSADLIGLRPSLLSSTVQGEQF 385 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWL 318 + ++ + T + + L + + ++ ++ Sbjct: 386 YGDMWRTLETEGSWEGEVWDTRKNGDVFPLLVTVKTIHDAKSRITHYVFSFSDITTTKRD 445 Query: 319 NRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLM 370 H A PLT LPN RAL + + + +DN + ++ G Sbjct: 446 ADAIHKLAFFAPLTHLPNRRALIDTVSQALNSSQRHIKSLALLSIDLDNFKNINDTLGHQ 505 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET--------EGRLQHMVNILN 422 + + + L ++ ++ + ++ G E ++VL ++ + + + Sbjct: 506 LGDKILIETAQRLRRCVRSDDAVARIGGDEFVVVLENLDSNIESAKVEVEVVTTKILAVL 565 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 ++ + + G D Q ++ L Q QS + + + Sbjct: 566 NQSYRVDEQDIHSGASIGVALTDNGQILIEELFKQADIALYQSKRSGRNQ-MCFFDLAME 624 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLP 540 T Q L N + +A+ LY Q + + G + ++ GI++P F+P Sbjct: 625 ETVTLQAQLANALHSAVQLQQFELYYQVQVDSQQRPVGAEALIRWEHPQLGIVSPSDFIP 684 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 L +L VLE+ L G +VN+ P Q N +++ Sbjct: 685 LAEASDLILSIGQWVLETACAQLKRWQSQLHTSGLSVAVNISPRQFHQCNFVETVLQAIA 744 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 +ISP + LE+TE N ++ + QL + G A+DDFGTGY++ Sbjct: 745 SCNISPSLLKLELTETVILDNTSETIEKMHQLQRAGVEFALDDFGTGYSSLS-------- 796 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +K+D FV++I D +IV++I +AK+ ++ V+AE VET+ Q L LG QG Sbjct: 797 QLKMDQSFVRNIGIKEGDDIIVQTIIAMAKSLAIKVIAEGVETEAQHEFLDALGCPLFQG 856 Query: 719 YLIGRPQPLAD 729 YL G+P P+A+ Sbjct: 857 YLFGKPVPIAE 867 >UniRef50_B5ZH00 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZH00_GLUDA Length = 698 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 121/592 (20%), Positives = 211/592 (35%), Gaps = 20/592 (3%) Query: 154 STFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR 213 + G D + + VD T L ++ R SP + A + Sbjct: 96 ALAAGATDFLSSPVDHTEFLTRARNLLQLGWHQKR-ARSPVQLEQELENSRAAQAEILRG 154 Query: 214 AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 + +V L+ T E ++I + G + + L Sbjct: 155 SRDRLLQVIDTVPALVSATDAEGNYIFVNRFHARVMGAGQGRNDAASQLRDRQVLETGLP 214 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR---IYHRSEWLNRRWHLQALTDP 330 Y ++ E L + + Y++ + R H A D Sbjct: 215 TARYEESIADRYGMERILLTSKIPFYDDASGMRYVLTTSLDITDRKKAERELHHLAYYDQ 274 Query: 331 LTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LP+ L Q +F + +D + ++ G + +R + Sbjct: 275 LTGLPSRSKLETEMQVLLRQRGADGPPFAFVLMDLDRFKGINDTQGHTIGDLLLRKVALR 334 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGA 439 L + + +L G E +V HM + +R + +G A Sbjct: 335 LRTALPRAGIIARLGGDEFAIV-HDVIDAADAAHMAERIVGIFARPFTLGDRVTSVGASA 393 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F T + LL + ++ +E + L +R A+ Sbjct: 394 GVTLFPARGATFETLLKRADLAMYRAKNEGRCR-YAFFDEEMEQAFAATTELEQALRRAV 452 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 + + +L+ QP + G + ++ ++ G ++ P FLPL + L A + L Sbjct: 453 ENEEFVLHYQPQIDLASGTLCGVEALIRWVQPGGDLVHPGCFLPLAEETGLIAPMTVWSL 512 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + A D R +VNL + Q ++ ++ + P + LE+TE Sbjct: 513 REACRQAARWQSDGIHIRVAVNLSGVLFRQHDVHRLVVDATTEAGLDPSFLELELTETAV 572 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N ES+ + L + G +AIDDFGTGYA+ L RL +KID VF++D+ ++ Sbjct: 573 IENPESAGRQLAALQQMGVSVAIDDFGTGYASLVYLTRLPIHRLKIDRVFIQDLGSSPGS 632 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV++I L K + V+AE +E Q Q L + Q QG+ G P P A Sbjct: 633 RAIVKAIIALGKNLGIRVIAEGIERQDQLRWLEEQDCQEAQGFYFGYPVPPA 684 >UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V294_9PROT Length = 1157 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 100/601 (16%), Positives = 198/601 (32%), Gaps = 60/601 (9%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL--WRRDIAPSLGKEKRAFTLSWLAA--L 223 + L L A ++ +I + R +E T + + Sbjct: 559 NWLFLLLAATGSMLIIAVSVVVIYLRDSLRAAADLRVSATAFDAQEGMFVTDAEGVIQRV 618 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + L ++ I + + +++ + Sbjct: 619 NNAFTQLTGYSASEVIGQT------PRLLSSGQHDAVFYALMWQSINETGKWAGEIWNRR 672 Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y + + S + S+ L A D LT Sbjct: 673 KNGEIYPEYLAITAVKDESGVVNNYVATFNDISDSKAATNEIQLLAFYDALTG----LPN 728 Query: 341 E------------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 + + + +DN + ++ G + +R + L ++ Sbjct: 729 RRLLLDRLLQALASSVRSNRMGALLLIDLDNFKTLNETMGHDIGDLLLRQVAERLTACVR 788 Query: 389 ENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 + + +L G E +++L ++ + + + Sbjct: 789 NGDTVARLGGDEFIVMLEEIGAQTVDSVTHTTTIAEKILNSLNLPYRLEKHECHSTPSIG 848 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F G Q++ L+ Q+ Q+ L + + + + L +R AL Sbjct: 849 ATLFSGTQQSADELMKQVDIAMYQAKQAGRN-GLRFFDSKMQDAISARASLEADLRVALI 907 Query: 501 QGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + L+ Q N G + ++ + G+++P +F+PL + L VL++ Sbjct: 908 NSEFQLHYQIQVNSLGAALGAEVLIRWMHPQRGMVSPAQFIPLAEESGLILPVGEWVLKT 967 Query: 559 LLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 L + +VN+ Q + + + +P Sbjct: 968 ACHQLKVWQDNALTRELTLAVNVSSKQFRQAEFVELVKKTLQSSGANP---------SLL 1018 Query: 617 FS---------NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 N + + + +L G +IDDFGTGY++ + +KRL D +KID FV Sbjct: 1019 KLELTESLLLENIDEIIAKMNELKLMGIHFSIDDFGTGYSSLQYIKRLPLDQLKIDQSFV 1078 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +DI+ + DA IV++I ++ A L+V+AE VET++Q+A L G QGYL +P PL Sbjct: 1079 RDIMDDNNDAAIVQTIIAMSDALGLNVIAEGVETREQRAFLDSHGCHTFQGYLFSKPIPL 1138 Query: 728 A 728 Sbjct: 1139 E 1139 Score = 55.8 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 18/208 (8%), Positives = 53/208 (25%), Gaps = 8/208 (3%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLS------ 54 +L + I+ + F + + S + S + L + L Sbjct: 61 LAGGSLCLGVGIWAMHFIGMLAFNLPCSSSYDARLTLLSMVPGILASMLALSLISRHDIS 120 Query: 55 -ILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 + + G + + M + + + + +++ + Sbjct: 121 NLKLVAGGVLLGSGIGAMHYAGMAAMRIDGMIRYDVRLFLISILVAVVLAILALWINFRL 180 Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 S + F+ L+ + + Y + F + A + + L Sbjct: 181 NARRSVWSRWSAFFSALIMGLAVSGMHYTAMAAAYFIRVETPAGSSAGMSPNFLTGIVLA 240 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + LI + + ++ Sbjct: 241 ASGLIIIVTIVATFVRKSNLLSLGRAYK 268 >UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X759_METSD Length = 765 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 84/441 (19%), Positives = 166/441 (37%), Gaps = 30/441 (6%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + QA D LT LPN + + + L +DN + ++ G Sbjct: 311 ASQKLIWKQANYDFLTGLPNRPMFHKQLAEEIHKSLQHQQPLVLMFLDLDNFKQINDQLG 370 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + + + + ++ L +L G E +VLS + + +++ + + + Sbjct: 371 HSIGDKLLVETGARIAAVARDCTLLARLGGDEFTIVLSNVQNQQQVEWLCERILRQVSLP 430 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 N + + F + ++ L+ ++ + Sbjct: 431 FTIENHVVYVTTSIGIASFPEHSRDVETLMKYADQAMYEAKRLGRNR-YQFFSPSMQELA 489 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ + N +R AL++ +L++Y QPI + E + ++ G++ P +F+P+ Sbjct: 490 AHKLQVSNDLRHALNRHELVMYYQPIVDLATNEIHKAEALVRWQHPTRGLVPPFEFIPVA 549 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG---------------PRFSVNLMPLTLLQK 587 + + R V + T + + S+N+ PL Sbjct: 550 EETGMINRMGDWVFRQSARDTVTLVQESLASRSAPPEGNVVDATIFQVSINVSPLQFQSS 609 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + + +EITE ++ + Q G +IDDFGTGY+ Sbjct: 610 QELQTWQAYLDQIGLPAECLAIEITEGLLLEASDQVKATLTQFRDAGIATSIDDFGTGYS 669 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ D +KID FV+++ D ++ I D+A + V+AE VET+ Q L Sbjct: 670 SLAYLKKFHIDFVKIDRSFVQNLGAGNDDMVLCEVIVDMAHRLGMRVIAEGVETEAQLEL 729 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L + G + QGYL P Sbjct: 730 LKRAGCDFAQGYLFSPALPFD 750 >UniRef50_C7RKP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKP6_9PROT Length = 640 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 117/598 (19%), Positives = 208/598 (34%), Gaps = 40/598 (6%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + L + R A RR A + +AA + Sbjct: 4 SVTFLSAPRVGQAPRLVSRARKTAERRQADQALRRSEA-LKASILASLACGIVAADPQGV 62 Query: 228 LLLCTP-------YENDFIAGYLVPVFFIIFTLGVGKLRYP------------FLNLTWA 268 + C P Y D + G L PV F G P L A Sbjct: 63 ITACNPCAEAILGYRADELIGKLTPVIFRDSGDPAGPNDRPSQPPHRTGDAGLDAQLARA 122 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 S + L+ + ++ + ++ + R + Sbjct: 123 GSGSTAGERDTTCLRKDGQQIAVRLATIPMHDPDGLVSGYVHTLVDITRHKEAEDGIQRL 182 Query: 326 ALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 DPLT L N L+ Q + L +D + ++ G + + Sbjct: 183 VHADPLTGLANRILLDARVRQDLSRAHRAREPLALIFLDVDRFKNVNDTLGHRIGDELLI 242 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 + L ++++ + L +L G E +LVL + +G ++ L + L Sbjct: 243 QVAARLDSIVRDEDTLCRLGGDEFVLVLPNTDADG-AANVAEKLLKITAPSYRLEQHVLT 301 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 A + + +++ L ++ A A + + + + N Sbjct: 302 CTVSAGIAMYPTDGDSVASLSTSADAAMYRAKARGGN-AYSFFTAEMQERLARTRQIRNE 360 Query: 495 IRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R A+ G+L L QP G + +L G+++P +F+P+ LS Sbjct: 361 LRRAIANGELHLQYQPRFAMAARRPVGAEALLRWQHRQLGMVSPLEFVPIAEGSGLSLAL 420 Query: 552 DLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + ++ + R +VNL Q N++ R+ R+ + P + LE Sbjct: 421 GEWVLRTAIRHMRGWQNRSLPPMRVAVNLSAAQFRQTNLSERVARILDEEGLPPPFLELE 480 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE N +++ + +L G +++D+FGTG ++ L+RL+ D +KID V + Sbjct: 481 LTENLVMDNPLAAIATVNKLRTLGVGVSLDNFGTGRSSMSDLRRLRVDRLKIDRSLVTGL 540 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T+ A IV + LA L VA VE+ Q A L G QG L+G P Sbjct: 541 PTDPDAAAIVAATLSLAHDLGLPTVAGGVESAAQMAFLRARGCDEAQGNLLGPPVVAE 598 >UniRef50_A0LBX0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0LBX0_MAGSM Length = 1134 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 99/584 (16%), Positives = 199/584 (34%), Gaps = 57/584 (9%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + Q+ + + EK + + +L + V Sbjct: 553 LQQEVAEHQLTQAKLFLVNQVFEKARQAIVITDHNNKILDVNPAYEALTGFQKQQVVGHD 612 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 + + ++ + + + Y + ++ Sbjct: 613 PAVGKSGRHDPAFYARMWRSLLSENHWEGEVWDRRSDGSIYPKYLSIDRVLDRQGSVLNY 672 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + M + + + DPLT LPN + + + Sbjct: 673 VAMFQDLTEQKATEEELERLSHYDPLTGLPNRALFRNRLEHEFLVARRHNRSVALVLINL 732 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ--------------ENEKLYQLPGSELLL 403 D + ++ +G + + + + L L++ +++ L +L G E + Sbjct: 733 DRFKQINDSFGFTVGDRLLAMVAKRLEQLVRKTDLIARQENRQERDSDTLSRLGGDEFSI 792 Query: 404 VLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L+ + L + +G + N E+L ++ Sbjct: 793 ILAELRAAEDAAIVARRTVALLEEPYDIEGQEVFLGGSLGVSIYPENAESLNGMIQCAER 852 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 ++ E ++ + +QV L +R A+ Q L+ QP E E Sbjct: 853 ALVKAKEGGRN-TFRFYSEEMNRHSAEQVRLETELRRAVMQERFQLHYQPKLEIATGEIE 911 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFS 576 G + ++ + DG + +PD F+PL + L +L+ + + + R + Sbjct: 912 GVEALVRWPRRDGRMFSPDAFIPLAEETGLIVPLGRWILKQACADVVAINAQRVRPLRVA 971 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE------------EQAFSNAESSM 624 VNL Q+++ ++ + + + ++ Sbjct: 972 VNLSAKQFQQEDLEQMVLEALEETG------------LETQLLELELTESMMMGDVDEAI 1019 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L G ++IDDFGTGY++ LKR D +KID FV+D+ ++ DA IV ++ Sbjct: 1020 NTMSILKGLGLTLSIDDFGTGYSSLSYLKRFPVDALKIDQSFVRDLERDSEDAAIVHAVC 1079 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +L ++ + VVAE +ETQ Q L +L QGY I RP PLA Sbjct: 1080 NLGESLGMKVVAEGIETQLQMDFLRQLNCDTGQGYFIARPMPLA 1123 >UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction protein n=3 Tax=Alteromonadales RepID=B4RZW0_ALTMD Length = 794 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 98/430 (22%), Positives = 181/430 (42%), Gaps = 19/430 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 E + QA D LT LPN + + + L +DN + ++ Sbjct: 356 ERERASELIWKQANFDTLTGLPNRNLMLDHLQLALKTADREGDRVAVAFLDLDNFKDIND 415 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + + + ++ N+ + +L G E +++L+ ET + +V + Sbjct: 416 TLGHDVGDQLLIECAERIKQCLRANDTVSRLGGDEFVVILNSIETLSSIDIVVQKILDVI 475 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + N + + + ++ LL + + + + Sbjct: 476 LKPYLINVERVHTSASLGVTLYPDDARDIKGLLKNADQAMYGAKDLGKN-SYKYYTQDMQ 534 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 K++ LLN +R A+ +L + QPI + + + +L + G + PD+F+ Sbjct: 535 AVAVKRITLLNDLRYAIQNDELFIEYQPITSFKDGKAIKAEALLRWQHPEKGRIAPDEFI 594 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT-LLQK-NIAGRIIRL 596 PL + L V E + K + + + +N P Q+ +I + RL Sbjct: 595 PLAEESGLIIEISNWVFEEVCKNVKRWQTHYCRELQICINTSPSQYFQQETSITDWLTRL 654 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +I+ ++++LE+TE + + Q + G IA+DDFGTGY++ LK+L Sbjct: 655 LDE-NIAARSILLEVTENLLMEADTNVSKKLFQFRQAGVDIALDDFGTGYSSISYLKKLP 713 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FVK + + D ++ +I +AK + VVAE VETQ+Q +L+ +G + Sbjct: 714 TDYLKIDKSFVKTMTDVSNDKVLCEAIIVMAKKLGIKVVAEGVETQEQYDILNNMGCDFG 773 Query: 717 QGYLIGRPQP 726 QGY I RP Sbjct: 774 QGYFIARPMS 783 >UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinococcus radiodurans RepID=Q9RX49_DEIRA Length = 805 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 100/554 (18%), Positives = 184/554 (33%), Gaps = 57/554 (10%) Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + P ++I G+ + ++ A + + + L+ Sbjct: 225 AAIGNPQIREWIMGHTDAEYVAERGFPPELATERGRHMDEAARERKTVQFEERMLRPDGE 284 Query: 288 EYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNR------------------------ 320 L + L Sbjct: 285 PVYQLRNYTPLFDENGELLLYLGHGVDVTELRRTQEALRELNAQLEERVEARTAELEALS 344 Query: 321 -RWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLM 370 + AL D LT LPN Q + L +D + ++ G Sbjct: 345 RQLQHDALHDSLTGLPNRALFSDRLSQAIARSKLPGGPQYAVLFLDVDRFKGINDTLGHP 404 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIH 427 + + R L ++ + + +L G E ++L ++ + + + R + Sbjct: 405 TGDAMLVEMARRLRACLRATDTVARLGGDEFTILLEPLQSTEQAAQVAARIQDALRRPMQ 464 Query: 428 WNN----------TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + M + ++ +L ++ Sbjct: 465 MPAAGPGGLPGGWHQVTMSASLGIVHSQPDYDSAMAVLRDADIAMYRAKDGGRAK-YRVF 523 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + + + +R AL +L + QP+ + EG++ ++ + G++ Sbjct: 524 TPEMREHILHVNRMEHELRRALAADELRVRYQPVLDLDRGRIEGFEALVRWQHPERGLLG 583 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIAG 591 PD F P+ + L D VL + L SVN L ++ Sbjct: 584 PDDFTPIAEESGLLPDIDRWVLARACRELVQWQRLYPHDPPLHLSVNFCSQHLAAPDVHE 643 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 R+ L +R P + LEITE S N+E+L + G R+ +DDFGTGY++ Sbjct: 644 RVKELLQRTGFDPGRLNLEITESSLLSQTGDVQRNMERLRQLGVRLHLDDFGTGYSSLSY 703 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+ D++KID FV+ ++ N +A +VR+I +AK +L VVAE +E +Q A L L Sbjct: 704 LQLYPIDVLKIDRSFVQGMLDNDSNAELVRTIVAMAKNLNLKVVAEGIEDPRQLAALRGL 763 Query: 712 GVQYLQGYLIGRPQ 725 G QG+L Sbjct: 764 GCDAGQGFLFSPAL 777 >UniRef50_Q1YK72 Putative sensory protein, diguanylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YK72_MOBAS Length = 632 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 109/596 (18%), Positives = 209/596 (35%), Gaps = 24/596 (4%) Query: 150 PLKISTFFGDADAIFTVVDLL-SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 P + + T++ L+ S+ A + + FYY + A+ + + Sbjct: 5 PTERAVIAPSMLRFTTILALIVSVLVAFVPPALHFYYGLQYAEGSLAAEARLNSRLVSQI 64 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 + ++ + V I + + Sbjct: 65 VGRNPQMWQFETLRIDEIIAFTDATVTKTLLNAEGGEVSRIGAAALPWPTVSTTHPVYDS 124 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + Q+ + +L F++ + V R A Sbjct: 125 GAVAGRIVITQSLF-ALARTSALLFLVCAAGALGVFFALRTLPLRLLRRAADRASFLASH 183 Query: 329 DPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN + Q+ + CL +D+ + ++ G +R + Sbjct: 184 DPLTQLPNRSLFNEWLVRSVADVDRQDGSMAVLCLDLDHFKEVNDLLGHAAGDELLRQVT 243 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 + ++ + L +L G E ++ + L S+ + +G Sbjct: 244 ERMTATLRRYDILARLGGDEFAIIQKHFAQPAGSARLAERLIEELSKPFDLKGNEVLIGV 303 Query: 438 GAAWGRF--DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + Q LL Q ++ E+ ++ + + + + Sbjct: 304 SIGVALRRDPED-RDGQDLLRQADMAMYRAKGEGRG-TFRYFEDAMNDRLVARKKVELAL 361 Query: 496 RTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ + +L L+ QP + + +G + ++ + + GI+ P+ F+ L + L Sbjct: 362 RHAIARNELQLHYQPQIDMKTNSVKGVEALIRWYRGEDGIVQPNDFIQLAEETGLIIPIG 421 Query: 553 LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 V+ + F+VN+ P+ N+ + + P + +EIT Sbjct: 422 EWVIREACRQAGDW----PELTFAVNVSPVQFRHGNLVETVRSALAEAGVEPHRLEIEIT 477 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E S+ + ++ + L G RIA+DDFGTGY++ L+R D IKID F D+ T Sbjct: 478 ENVLLSHTDETIETLRALQAMGVRIAMDDFGTGYSSLSYLRRFPFDKIKIDRSFTSDLGT 537 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV ++ +L A + AE VET +Q LL G +QG+L RP P A Sbjct: 538 CFDADSIVAAVINLGAAMGMVSNAEGVETLEQAELLRAQGCNEVQGFLYSRPVPSA 593 >UniRef50_C9RXJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C9RXJ9_GEOSY Length = 947 Score = 601 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 103/626 (16%), Positives = 210/626 (33%), Gaps = 30/626 (4%) Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF--YYLTRM 189 + + A A ++ + + + L+ + + Sbjct: 314 VAAAFGQAALFPAVEVLVKDAYTAVRPAAFAAISLAETAASAESGLLSPWSSPPEGMMTL 373 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLV 244 + R E+R +L V L + + GY Sbjct: 374 AQLMSTSSRDMERLHVRLQMSEQRYKSLFEHNTDIVYSTDLHGRLTSVNPAFEQVLGYTK 433 Query: 245 PVFFIIFTL--GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--IS 300 +L + + YN + Sbjct: 434 EEILYTNSLKYIHPNDIPRVTRYFYRALRGNIQTYNLEIPTKSGERLLFQMKNIPIIVDG 493 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQAP----EQEAGKSF 352 V + + R + + A D T LPN + ++ + Sbjct: 494 KKVGIYGIGRNITEQKKAEEKISYLAYYDIDTNLPNRTKWMELFSEQLDKAKQKRRKMAV 553 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS----GP 408 + +D ++++ G +R + + ++ + +L + G + L+ Sbjct: 554 ALIDLDRFKWINDSVGHYAGDDILRQLVERIRRVLPPSAELGRFHGDKFCLLFPLKTEAQ 613 Query: 409 ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 +V + +R I + + F + E LL + Sbjct: 614 AATEAALRIVREV-ARPIVYEGKEFFVTASVGLAMFPDDGEDEHALLRHADMAVNMAKKG 672 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 ++ ++ + ++ + +R A+++ +L L QPI + + + ++ Sbjct: 673 GGNR-VERYCAQMNEEAMHRLEMGGHLRRAIEENELFLCYQPIVDVHTGAVKATEALIRW 731 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS--VNLMPLT 583 G++ PD+F+PL + L VL++ + R + VN+ P+ Sbjct: 732 RHPKLGLVRPDEFIPLAEETGLIHEIGRWVLKTACRQTKQWQEITGNNRLAIFVNVSPVQ 791 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + + K+ +SP + LE+TE S+M +++L K G IA+DDFG Sbjct: 792 FQHERFVDNVKQALKQSRLSPSCLHLELTEHSMLRYLSSTMRTMDELRKLGVGIAVDDFG 851 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 +GY+++ LKRL A I+KID F++ + N D IV+++ + L +AE VET + Sbjct: 852 SGYSSFHYLKRLPATILKIDRAFIEQLHANASDEAIVKAMITMGHGLGLETIAEGVETPE 911 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L L Y QGY+ P + Sbjct: 912 QLNRLRDLQCTYAQGYVFCPPLLAEE 937 >UniRef50_B5W9L6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Arthrospira RepID=B5W9L6_SPIMA Length = 1190 Score = 601 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 102/569 (17%), Positives = 193/569 (33%), Gaps = 38/569 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGY-- 242 +V + + + E++ + A + + L I GY Sbjct: 605 LVKLVSSVAMQLGSVFQRKQAEEKYRDIFENALEGIFQIDLQGKYISANPALAQILGYDS 664 Query: 243 ----LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 LV I + F+NL ++ N+ + + + Sbjct: 665 QQQLLVRGSQIKNVYADPETYNRFINLLQTRGSVS--NFEAQVYRRDGEAIWIWQNARAI 722 Query: 299 ----ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------- 346 + + + + + A D LT L N + Sbjct: 723 YSDRHNRVLYYEGSIMEITHLKETEAKLRHSASHDSLTDLWNRAFFLDKLDDSIRKCKTL 782 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D +F++ G + + + + L + ++ L +L G E ++L Sbjct: 783 DNYQFAILFLDLDGFQFINDSLGHAIGDQLLIEVSKRLTDSV-DSHILARLGGDEFTILL 841 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + I + G + N ++ +L Sbjct: 842 ENIRDIQEAIDVAERIQESLKLPIFLEKNQIFTGASIGIVEGNSNYQSSPEVLRDADTAM 901 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 ++ + + +++ L +R AL + L QPI G+ Sbjct: 902 YRAKRQGKG-CYVVFDSTMRTNALRRLYLQTQLRLALQEQQFELNYQPIIELSTGTIAGF 960 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFS 576 + +L G+++P +F+P+ + L VL L+ S Sbjct: 961 EALLRWDHPQEGLISPAEFIPIAEEAGLIVDIGEWVLRQACFQLSEWKEKFAVYSNLMMS 1020 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL +++ RI ++ ++ + LEITE ++ E ++ ++QL + + Sbjct: 1021 VNLSSQQFTN-DLSRRISKILVETGVAGSELKLEITETAIMNDPELAIATLQQLKQQQIK 1079 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I IDDFGTGY + L + DI+KID FV I IVR I LA++ + +A Sbjct: 1080 ICIDDFGTGYCSLGYLHKFPVDILKIDRSFVSQIPEGEDKREIVRVIVALAESLKMDAIA 1139 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 E +ET +Q L +Y QGY RP Sbjct: 1140 EGIETAEQLHHLQNFKCKYGQGYFFFRPL 1168 Score = 42.7 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 10/175 (5%), Positives = 38/175 (21%), Gaps = 13/175 (7%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 ++ + ++ L + + + A + ++ TL Sbjct: 288 ILLLSGTMMLFIMVGTACLVVIIRPLTNQISQEIWERHKAEAELIKEKNFTQTLLEANPA 347 Query: 224 SVLLLLL-----CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY- 277 ++L + GY + + + W + Sbjct: 348 FFIVLDVEGKVKFMNPSMLNTLGYKQEEVEGMNYSATFVPKEEGKSAPWVFELMINRRLP 407 Query: 278 ---NQNFLQGVETEYSLAFILAVLISFSV----CLLYMVRIYHRSEWLNRRWHLQ 325 + + + E + + + + + + + L Sbjct: 408 IRTEETMITKDDREIIVEWYGRAVFNKETDEYEYFVGAGLDITDRKRADEELQLL 462 >UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VEL8_DESVV Length = 926 Score = 601 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 107/572 (18%), Positives = 195/572 (34%), Gaps = 30/572 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFI 239 L ++ I+ RR E R + +A + L+ L+ + + Sbjct: 340 LLLELVSGHVAGAIIERRKAFALQESEARFRAIFEHSAAGICLVGRDGLLMDANPAFEEL 399 Query: 240 AGYLVP--VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN--FLQGVETEYS---LA 292 G V K + + + FL+ + + Sbjct: 400 LGLTRAEVVGCRFDAFLPVKAASELDSTCRSSFAEGRDTVSLRLPFLRVDGEQRWGRQIV 459 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQEA 348 + + +L V + R A D LT LPN + Sbjct: 460 TAVRDVAGDVAFVLAQVEDITEQQQTEARLTRMAFHDALTGLPNRVLFLDRVETALRRAR 519 Query: 349 G-----KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G +R R L P ++E + + + G E + Sbjct: 520 RHETYHFAVLFLDLDRFKVVNDSLGHKAGDELLRQFARRLEPCLREVDTMARFGGDEFAI 579 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L +++ L + + G + + +L Sbjct: 580 LLDDMSDVDESVNIIERLQAALRQPFLVQGMEVYTGASIGAVLRARDYTQAEDILRDADI 639 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 ++ E + + N +R ALD ++ LY QPI Sbjct: 640 AMYRAKDSGKGR-FVVFESSAAPGAQDILRRENELRRALDGDEIELYFQPIVALRTGRIT 698 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 G + ++ + G++ P F+PL + NL D+ V + + + Sbjct: 699 GLEALVRWQHPEQGLLAPGTFIPLAEESNLICDLDMHVFRKGCLAVVALQEAFEGPLAVN 758 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +N+ + + + I + + PQ V LEITE + E + +L G Sbjct: 759 INISARSFRRLRMVQDITDILRETGCPPQMVKLEITENLLLTGLE-VTDKLWRLKDLGLS 817 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 + +DDFGTGY++ L++ DI+KID F+ + IV SI +L + L VVA Sbjct: 818 LVLDDFGTGYSSLNYLRQFPMDILKIDRSFISRVHEERAARGIVESIANLGRTLGLGVVA 877 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E +E +Q +L ++G + QGY RPQP Sbjct: 878 EGIEVSEQAEILLEVGCPHGQGYFYSRPQPFD 909 >UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FF8_SACD2 Length = 581 Score = 601 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 94/417 (22%), Positives = 174/417 (41%), Gaps = 16/417 (3%) Query: 328 TDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 DPLT L N L + + L ID + ++ G+ + I Sbjct: 145 FDPLTGLANRAQLYEQLRRAIDYGRVHRECVTVMMLNIDRFKNINDSLGVGAGDDVLIQI 204 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMG 436 L ++++N+ + +L E +L+L + + + + + + + ++ + Sbjct: 205 SEILRNVLRDNDTVARLGSDEFILLLDKVDNPHHITKIADKILNAIGQPLNICGHEITCT 264 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 +F + +++ LL ++ + +S +T +L+ N +R Sbjct: 265 ASLGVSQFPIHGDSIDLLLKHADEAMARAKSEGKNR-YKIYTAQMSERTVDALLMENDLR 323 Query: 497 TALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL+Q + +L+ QP + G + ++ G+++P F+PL + L Sbjct: 324 RALEQDEFILFYQPQVHLRTGKIIGLEALIRWQHKTKGVISPLDFIPLAEETGLIEEVGA 383 Query: 554 QVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + + +VNL Q + A ++ + + PQ + LEIT Sbjct: 384 WVLAHACERFHHWLKQGLSLGKVAVNLSARQFRQAHFAETVVEALNKSKLPPQYLELEIT 443 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + + + + L+K G IAIDDFGTGY++ LK+ + +KID F+ D+ + Sbjct: 444 ESLTMQDTDEVLQTLGYLNKLGLSIAIDDFGTGYSSLSYLKKFPVNKLKIDRTFIHDVGS 503 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D I +SI DLA S+ VVAE VE Q L+ G +QGY +P + Sbjct: 504 ELDDGAIAKSIIDLAHNMSMLVVAEGVERLGQSRWLYDQGCDQVQGYYFCKPLSENE 560 >UniRef50_D0J677 Diguanylate cyclase/phosphodiesterase n=2 Tax=Comamonas testosteroni RepID=D0J677_COMTE Length = 829 Score = 601 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 111/591 (18%), Positives = 209/591 (35%), Gaps = 21/591 (3%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 + + ++ L + + R+ + + Sbjct: 206 APETSEVLQLLSGRVLERRSVPQLSRGVAIGRIYSYRDITVESSSATELRLAARVFESSL 265 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI--IFTLGVGKLRYPFLNLTWAVSTLCL 274 A + +++ P + G V +F G + Sbjct: 266 DGIFIADANGVIVQVNPAGGQLLHGKAVLGLAAWTLFESEGGPVSDLLELAAARWDVGSF 325 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPL 331 N Q ++ L L+ +R ++ A +D L Sbjct: 326 WEGNLWLKQSEGQRCAVWLSWVALRDGYGRLVQSIGFMRDMTMQRSAQKQIEQLAYSDAL 385 Query: 332 TLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN +L + + + S L +D + ++ G ++ + + L Sbjct: 386 TGLPNRLSLSRHVQAAITAARFTQQPFSILFLDLDRFKIINDSLGHDFGDRVLKLVAQRL 445 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 L++ + L + G E +L L EG + + + + G + Sbjct: 446 SGLLRPADVLCRQGGDEFVLYLHDCTGEG-ASAVAARILDEMRQPFMLDGLGFSVQCSIG 504 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 +F + TL L+ Q + + +S ++ L + +R ALD Sbjct: 505 AAQFPADGLTLDELIRQADIAMYRVKERGRG-NFSFYQPQMSAGLLSRMKLEHAMRQALD 563 Query: 501 QGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 +G + ++ QP + + +L + G+++P F+PL + D VLE Sbjct: 564 KGHMAVHFQPQVHIRSGRIVAAEALLRWTDPELGVISPAAFIPLAEESGYVVALDAWVLE 623 Query: 558 SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 ++ A + SVN+ L Q + R+ + + + Q + LE+TE Sbjct: 624 QSVQEAARWLAMDMPVKVSVNVSALEFRQPDFVDRLKYVLEASGLPAQWLELELTESILL 683 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 A+ + Q+ + G + IDDFGTGY++ LK+L IKID FV+ + + D Sbjct: 684 QEAQEMALRVHQIAELGVGLVIDDFGTGYSSLAYLKKLPISKIKIDQSFVRGLPHDAGDK 743 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV +I + +A + +VAE VETQ+Q + +L Y QGYL P Sbjct: 744 AIVGAIISMGQALGVELVAEGVETQEQCQAIEQLQGDYFQGYLCSPALPAE 794 >UniRef50_C1AC92 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC92_GEMAT Length = 556 Score = 601 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 106/540 (19%), Positives = 194/540 (35%), Gaps = 32/540 (5%) Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPV---FFIIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 + ++ + + A +L+ I+ + L L T Sbjct: 3 HSPEAIAVHRNGRLVYANEAAAHLIGARQGADILRRRASDFVHPDDLALVQQRLTSGPAR 62 Query: 277 YNQNFLQGVETEYSLA-FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + + +++ + + + R + L R A D LT L Sbjct: 63 VQYRLRRLDDGIREVEAVSVSIAFEGTPAMQTLFRDVTERKELEARLLHGAFHDALTGLA 122 Query: 336 NFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N E + L +D+ + ++ G +R++ ++ Sbjct: 123 NRALFRDRLEHALQVAGRDPDHRIAVLFLDLDDFKGVNDSLGHDAGDQLLRTVSERIMAE 182 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGR 443 ++ ++ + + G E ++L TE +VN + R + + + Sbjct: 183 VRASDTVARFGGDEFAVLLERLPTESEALTIVNRIKVALRRPLMLEGRLMSVATSVGVA- 241 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL---D 500 + + + LL ++ E + +++ L IR A + Sbjct: 242 YATPADDVDTLLRNADVAMYEAKEAGKAR-HAVFEPSMYAAIVQRLQLEADIRMAAGAPE 300 Query: 501 QGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + L L QPI + G + +L G +TP F+P+ + VLE Sbjct: 301 RSGLFLAYQPIVDLRTGAVRGLEALLRWDHPTRGTVTPSVFVPVAEHTGVIVPLGRWVLE 360 Query: 558 SLLKWLATHPCD------KKG--PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 L + P SVN+ L +++ + + +R ++ L Sbjct: 361 QACTQLMAWRTQWWRERRQPDSVPSVSVNISGRQLAEEDFVDEVAAILQRTGAPAGSITL 420 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE N ESS+ + L G R+AIDDFGTGY++ L++ D++KID FV+ Sbjct: 421 EITESVIMRNTESSLRTLSALKALGLRLAIDDFGTGYSSLSYLQKFPVDVLKIDRAFVEG 480 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + DA + R+I L L VAE VET QQ L +G QGYL +P+ + Sbjct: 481 VAQGGSDAALARTIVTLGTTLGLRTVAEGVETSSQQEALEAMGCVDGQGYLFSPARPVDE 540 >UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M823_METRJ Length = 785 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 113/734 (15%), Positives = 235/734 (32%), Gaps = 23/734 (3%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 ++ + ++T F + + I S+ + + + L + L+ LF Sbjct: 50 LAGTAVVAGLGVWTTHFVAMLGYRPDMVLGFDDTTTIFSALVAILVVGLPLALARLF-PS 108 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 WR H V+ A GL R Sbjct: 109 WRIRTLAGAAAGFGIGAMHHAGMA-ALEGCQQTHSPVMNVLAAGIGACSLALVCGLPRRL 167 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + + + + G+ + + + + + + Sbjct: 168 ATPWVVCALFTLAVTGTHFVAIAGTTLVPIQGYRGLPNENIVLSILTTGGAAVLFLGAFL 227 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF-I 239 + R ++ + L L D + Sbjct: 228 TILAARRFDAQERAH--SSILRTALDNMSNGLLYLDPAERVRLYNRRYLEIYHIPVDVDL 285 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 G + + G V + ++ +E L + + Sbjct: 286 TGMTIDQIIDLVGYRHGWTAERREAARRRVDDWRSVKNSKQIDYPLEDGRVLQVEIRPIE 345 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE----AGKSFCCL 355 + + RR A DPLT L N RAL E + + Sbjct: 346 DGGN--VVTFDDVTKEREAQRRIAELAFCDPLTKLANRRALSARLEHDFTPKRVVKLLLI 403 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL--SGPETEGR 413 +D + ++ YG ++ + + L + + + +L G E+ +++ + Sbjct: 404 DLDRFKQVNDTYGHVVGDQLLIQVANRLRTIAGPDGFVARLGGDEMAVLVYGDQTQAMAV 463 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 ++ + ++ + +G + + L+ +S Sbjct: 464 ATAVIEA-LALPYGIDDLTVSIGCSIGLCC-TDDAQDAIELMQFSDIALYESKRQGRGRT 521 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDG 530 + +V L +R A+++G++ L QP+ + GY+ ++ Sbjct: 522 SC-YTPDMLRTVADRVQLETDMRAAIERGEMYLAFQPVIALVDDRIIGYEALIRWDHPKL 580 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G ++P +F+PL + VL+ + A P +VN+ P+ + Sbjct: 581 GAVSPARFIPLAEETGQIIPIGAWVLQEACRQAARLPN---DVYVAVNVSPVQFRSPQLL 637 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + R + + + +E+TE + + + + G +A+DDFGTGY++ Sbjct: 638 SDLTQALARSGLPAERLEIELTETAIVEDGPRIAKILAAIRRLGVTVAMDDFGTGYSSLA 697 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+ D IK+D FV T+ +++ I +AKA + + AE VET Q AL+ + Sbjct: 698 HLRDFPLDRIKVDRSFVATAETDRHSLAVLKGIMHIAKALDVVLQAEGVETPSQLALMRE 757 Query: 711 LGVQYLQGYLIGRP 724 +G +QGYLIGRP Sbjct: 758 IGCDAIQGYLIGRP 771 >UniRef50_Q8DHG0 Tlr1999 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DHG0_THEEB Length = 790 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 111/512 (21%), Positives = 204/512 (39%), Gaps = 29/512 (5%) Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 D +A Y V ++ + G+L + + ++ + T+ ++A + Sbjct: 277 DLLAHYQVKANLVVPIVVEGRLWGLLI-CHQCAHPRNWQDSEIELIKQISTQLAIAIL-- 333 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QE 347 + R + + + QA D LT LPN E + Sbjct: 334 ----QAELYQKAQREIQERKEVEAQLLYQARHDHLTHLPNRWLFEDQVRLSLNHAAAHSD 389 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + CL +D + ++ G + +++ + L + + + +L E ++L+ Sbjct: 390 FHYAVLCLDLDRFKTLNDSLGHAIGDLLLQAFAKRLTRCVSPQDVVARLGSDEFAVLLND 449 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + Q + L + ++ L D + ++ + LL Sbjct: 450 IQGIEQAQAIAQRLRERLNHPFEIDHYTLYTTVSIGLVMGDAHYKSTEELLRDADMAMYY 509 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDE 521 + + H +D + M+ Q ++ L +R A+DQGD LY QPI N G++ Sbjct: 510 AKSKGHNR-IDIFDPMMLQQVRDRLHLEVELRQAIDQGDFALYYQPIINLRSQSPRGFEA 568 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-----FS 576 ++ K D +++P F+P+ + L VL S + L R S Sbjct: 569 LVRWQKED-TLISPTVFIPVAEETGLIFELSRWVLRSACEQLQQWQKRYPKLRSLGFTVS 627 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +NL + I + + +H++ Q + +EITE + +S+ + +L G R Sbjct: 628 INLSANQFSLPTLVAEIEQALEHHHLAGQFLKIEITESTLMHHLDSACEILTKLKAMGVR 687 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I IDDFGTGY++ L+ L D IKID F+ + + D +VR+I LA+ L +A Sbjct: 688 INIDDFGTGYSSLSYLRNLPLDGIKIDRSFISQMDRSQEDLELVRTILVLARNLHLDCIA 747 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E +E+ Q LL L + QGYL P Sbjct: 748 EGIESTTQLQLLRSLRCPFGQGYLFAPPLTAD 779 >UniRef50_C7R9T3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9T3_KANKD Length = 810 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 106/557 (19%), Positives = 205/557 (36%), Gaps = 36/557 (6%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVF------FII 250 + K+K TL + +L+ + GY I Sbjct: 242 KTEQALRRKDKYYRTLVENSYDCILMYDRNMNVTYISPSVTRVTGYTEEDLIGKTLEMFI 301 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYM 308 F + + L ++ + + L + + Sbjct: 302 FEEDREEAEANLRYVAENPGALSVV--ERRINHKDGHILWIESRLVNHLGDPDIQGVTVN 359 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNL 360 + + ++ H A DPLT LPN L + + E+ + + +D Sbjct: 360 FHVITERKQAEQKIHNLANYDPLTQLPNRYLLRKRLLKGLADSVKNESKLALMYIDLDRF 419 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + ++++ +T+ ++ ++ L ++ G E +VL +E +++ Sbjct: 420 KEINDTLGHSVGDALLQTVAKTIHKCLRSSDTLARVGGDEFTIVLPET-SEKEARYIAER 478 Query: 421 LNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + ++ + G F + + + L + Sbjct: 479 ILQQFRTPFKADSHTVQTGASIGISIFPDHSKKAEDLFRFADIAMYSAKKE-RNQ-YQLY 536 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 E S + ++ + ++TA+ L LY QP + + + + D G ++ Sbjct: 537 ELRHSERENRRRSVEKKLKTAIANDHLRLYYQPRVDIKSGAIKSVEALCRWYDPDHGDIS 596 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 P F+P+ + L QV + K L + ++NL L N+ + Sbjct: 597 PSVFIPIAEESTLVHELSQQVTDLACKQLVSWRNMGIDTTVALNLSIKDLRNFNLLNQFA 656 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + Y I A+ +EITE A ++ +++ + Q G +++IDDFG GY++ L + Sbjct: 657 DTMRTYDIPGSALEVEITESAAMTDVVNTVKVLNQFKDLGIKLSIDDFGKGYSSLAYLSQ 716 Query: 655 LQADIIKIDGVFVKDIVTNTLDAM----IVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L D +KID FV + + D M I+RSI LA++ L V E VET QQ ++L Sbjct: 717 LPVDNLKIDMYFVSQLSSQKQDRMINVNIIRSIISLAQSLDLHTVGEGVETIQQMSILQS 776 Query: 711 LGVQYLQGYLIGRPQPL 727 LG QG L RP Sbjct: 777 LGCDMGQGMLFCRPMSA 793 >UniRef50_Q139W0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q139W0_RHOPS Length = 801 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 123/750 (16%), Positives = 254/750 (33%), Gaps = 39/750 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW 61 + ++ + I++ F + + F + +A + + +++ L + Sbjct: 50 LLTAGVVTGVGIWSTHFIAMLAYLPGFDFD------FDFSLTIASLIVAAVMATLGL-SV 102 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 + + S F L ++ L + + + Sbjct: 103 AAYGEARWTTVVGGGLVGAGIAAMHFMGVTSLNFATLWDWDLVAVALLFGLSLSVGAVAL 162 Query: 122 WQR------LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD-ADAIFTVVDLLSLFT 174 QR L + + I ++ D I + + T+ +++ T Sbjct: 163 AQRGETLRSLAGAAGLLALAIGSHHFIAMGAMDVLRPIQIYDATGRISPLTLCLTIAVVT 222 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV---LLLLLC 231 + L L + A+ + D+A + L + Sbjct: 223 GAIAVAALLVALVDRRSNRRVAERSMQLDVALNNMGRGLCMFDVGGRVQLFNSQYLEMYN 282 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + L + + +G + + + + + + Sbjct: 283 LRASDIRSGDDLDRLLHLKTAVGTSPSDVDAHCGHLSAAIAERIPADWMTALPDGRKIHV 342 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 + + + R A D LT LPN A ++ E+ Sbjct: 343 TYQPIA----NGGWVITHEDCTERVQNRARIDFLAHHDALTQLPNRIAFDRHLEEAILRA 398 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + C+ +D + ++ YG +R + R L + + ++ G E ++ Sbjct: 399 KATRSSFAAICVDLDRFKEINDVYGHGAGDAFLRDVARRLTAA-GDGAFVARIGGDEFVI 457 Query: 404 VLSGPETEGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 V+ + + + + G + N + + L+ Sbjct: 458 VVEKGVQPRAAEELCGRIVRAFDLDFQLKGGAVKGGCSIGVAIYPDNGSSAEELIANADA 517 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEG 518 + A + E + ++ +L + A++ + QP + E G Sbjct: 518 ALYRVKADQRG-SFRFFETTLDASLREKRMLHKELIEAVEAEQFEPFFQPQVTASGEVVG 576 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 ++ + + G++ P +F+ L + L + D Q+L + + A+ +VN Sbjct: 577 FEVLGRWRHPNRGLVMPARFIALAEETGLISGIDEQILRAACREAASWDR---PLSIAVN 633 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P+ + ++A I+ + +SP + +EITE + +M + ++ G +A Sbjct: 634 LSPIDFRRGDVASMILSILFETGLSPGRLNVEITEGVLMQDDGRAMSQLRRIRDLGAHLA 693 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFG+GY++ L+ D IKIDG FV + +N IVR+I L + LSV+AE Sbjct: 694 MDDFGSGYSSLSYLQAFPFDKIKIDGTFVAQLGSNPQSRAIVRAIIGLGHSLGLSVIAEG 753 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q LL LG QGYLIG P P A Sbjct: 754 VETNAQFELLVALGCDEFQGYLIGHPAPAA 783 >UniRef50_Q1NTC4 PAS:GGDEF:EAL:Response regulator receiver n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NTC4_9DELT Length = 833 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 112/588 (19%), Positives = 206/588 (35%), Gaps = 29/588 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA---FTLSWL 220 + F A R + H R A + + + Sbjct: 239 LALEAGADDFLAKGGDGPTLRRALRYAIIRHRRDSDMRLAAAVIKHTREGITISRSDGTI 298 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 ++ + D I + R ++ + A+ + Sbjct: 299 IEVNDAFCRITGYRREDVIGQ------NPRLLQSGRQDREFYVEMWRALGEEGFWSGEIW 352 Query: 281 FLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 Y ++ + + + + + +R A D LT LPN Sbjct: 353 NKNKEGRIYPQLLTISAVPDGTGKPGHYVAIFSDISELKEQQQRLERIAHYDTLTGLPNR 412 Query: 338 RALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L ++ + L +D + ++ +G + +R++ + ++E Sbjct: 413 DLLADRLNHAMIQTIRRQTRLAVAYLDLDGFKAINDTHGHDVGDFLLRTLAGRMQQTLRE 472 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 ++ L +L G E + + ++ L + + + T L + F Sbjct: 473 SDTLGRLGGDEFVAIFQDLPDNETCLPLLQRLLNAAAMPVSYQETILQVSASLGVTFFPQ 532 Query: 447 NQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 +++ LL Q Q+ + + LL I+ AL+ + + Sbjct: 533 SEKIDADQLLRQADQAMYQAKQTGKNR-YHLFDAVQEVAMRGHHELLGRIKRALNDQEFI 591 Query: 506 LYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP N G + ++ + G++ P FLP I L+ VL + L Sbjct: 592 LYYQPKVNMRSGVVVGLEALIRWQHPELGLLAPAYFLPAIEDHPLAVAVGDWVLATALAQ 651 Query: 563 LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAE 621 LA SVN+ L Q + ++ + R+ + + LE+ E A ++ + Sbjct: 652 LAAWRRAGISLPLSVNISARQLQQDDFVAKLEQQMARWPEVPADQLELEVVESSALADID 711 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 I Q G A+DDFGTGY++ LKRL A +KID FV D++ + D I+ Sbjct: 712 QVSKIITQCRAMGVGFALDDFGTGYSSLTYLKRLPARTLKIDRSFVADMLDDPDDLAILE 771 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + LA+A + VAE VE+ L KLG + QGY +P P+A+ Sbjct: 772 GVLGLARAFNRQTVAEGVESAAHADSLLKLGCEVAQGYWFAKPMPMAE 819 >UniRef50_C5SQE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQE4_9CAUL Length = 622 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 96/568 (16%), Positives = 193/568 (33%), Gaps = 35/568 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------------LLLCTPYEN 236 M A R+ + +R + L L + Sbjct: 49 MTDELETANEKLRQSLRDLRENGQRFQATIETLPHGICLYDRDGHICEYNRAYLTFFDVD 108 Query: 237 DFIAGYLVPVFFIIFTLGVGKLR--YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + + + G + L ++ + ++ ++ Sbjct: 109 KANNARGLSLVQALEAAGRRMSASNARLMQLLEYLAIPKTGHSEGEYVWPSGRTVRVSRT 168 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------E 347 L ++ S A D LT L N ++ Sbjct: 169 GV----EGGGYLDVIADITESHLARATIERMANFDALTELANRNLFQKRLADLVARASAR 224 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + L +D + ++ YG + + + R L+ +++ + +L G E ++L Sbjct: 225 SMAAILSLDLDRFKAVNDLYGHGVGDALLAKVARRLVDVLRPGDLAARLGGDEFAVLLEK 284 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + L S + + +G D L+ Sbjct: 285 VSAHHDAHQVAKRLVSHLSAPYEIDGLEIVIGASVGIEFIDDPHAAPIDLMRHADQALYA 344 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + + + + ++ + +R A + L QPI + GY+ Sbjct: 345 AKRSGRND-IAVYDAKLHETYLERQQIEADLRKAAQSREFFLVYQPIFCVKSARVCGYEA 403 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 +L GI++P++F+P+ + + V+ K A P +VN+ P Sbjct: 404 LLRWQSPVRGIVSPNEFIPVAEETGIIEEIGSWVIRKACKDAAALPE---HTTIAVNVSP 460 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + + R + I+P + +EITE +A ++ + L G RI++DD Sbjct: 461 VQFRSRAFVSVVTRALQDSRINPNRLEIEITEGVMIGDAGEALKILRALKALGVRISLDD 520 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY+++ + D IKID FV+D+ + I+R+++ + + + AE VET Sbjct: 521 FGTGYSSFSYISAFPFDKIKIDQSFVRDLGQRSESLAIIRAVSGMCSSLGIVSTAEGVET 580 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +QQ +L +QGYL G+P L + Sbjct: 581 EQQFEILRTEHCDTMQGYLFGKPVALNE 608 >UniRef50_Q0A846 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A846_ALHEH Length = 1052 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 98/521 (18%), Positives = 183/521 (35%), Gaps = 24/521 (4%) Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVET 287 + I GY + P + + A++ + + Sbjct: 521 YVNPAFERITGYTAEEAVGQTPRIIQSGLMPSSWYREMWAALNRGEPWWGEFHNRRKTGE 580 Query: 288 EYS---LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + F L + + + + RR A D +T LPN Sbjct: 581 LFWEAGVVFPLRDDQGGITHYIAIKQDVTERKDAERRLEYHATHDTVTGLPNRALAMDRL 640 Query: 345 EQEAG----------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 E + L + ++ G + I L + ++ L Sbjct: 641 ETAVRRLAHRRGRGSGALLVLDLSQFRKINESLGHASGDELLCRIAERLQGALGPHDTLC 700 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E L++L T + + + L + + + + M F + Sbjct: 701 RPGGDEFLVILPELRTARQAEQVAKALLATLKAPLVLADQEIFMDARVGVTLFPEDGTDS 760 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL Q+ + + + + + L +R AL+Q L L QP+ Sbjct: 761 STLLRNAYAALSQAKQVARGD-FRFFKPEANERAHRWLALEGRLRRALEQETLHLVFQPL 819 Query: 512 RNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G++ +L + G ++P +F+P+ + L VL + A Sbjct: 820 VDARTLRPTGFETLLRWTLEEHGPVSPGEFIPMAEETGLIIPMGEWVLRKACQQAARWRA 879 Query: 569 D-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R +VN+ P+ + + + +R + + + LEITE + ++ Sbjct: 880 QTGHCYRMAVNVSPIQITGSDFVATVRTSLRRTGLPAECLELEITERMLLGGQRRVLQSL 939 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + L G +++DDFGTGY+ L+++ ++KID FV+ ++ SI +A Sbjct: 940 QALRDLGVGLSLDDFGTGYSALSYLRQMPFSVLKIDRSFVQGAAAGPRGEQLLCSIIGMA 999 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L VVAE VET+ Q ALL + G LQGY RP Sbjct: 1000 QGLGLRVVAEGVETEAQVALLQREGCDLLQGYHFARPMAAE 1040 >UniRef50_C1F295 Cyclic diguanylate phosphodiesterase/diguanylate cyclase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F295_ACIC5 Length = 806 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 120/727 (16%), Positives = 239/727 (32%), Gaps = 50/727 (6%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 L + + +S +A+ + + ++ L + I ++ + Sbjct: 98 AYLCLTVYGVSTVPVLVAVALVGQLCMIYVSLRYWGADRGI----VRGNMVIALLIMLWI 153 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 + + Q + + + A W+ R G+ + Sbjct: 154 VYEIRAGQAILGVYGTLTEIFAINAWFYWRDFRRASAGV-----------------LTAV 196 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 + F L ++ ++ + ++ F F + ++ A Sbjct: 197 LGLLAWALVFPAALVVAAWWPHLHVSSELWNIPKYFVE-------FGMILTLLEEEIQAA 249 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 D + L L + GY F + + + Sbjct: 250 NRTSEDYRVLFENNPSPMWIY----DLETLRFLRVNDAAQHVYGYSEEEFRQMTLMDIRP 305 Query: 258 LRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHR 314 L + + + + + + + + +V Sbjct: 306 QEEVPRMLEDVGLEREEMVFSGPWTHVYKDGRQSKVEVAAHTIHFNGRMARFCLVVNVTE 365 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 E L+++ QA D LT LPN L+ Q+ +F C+ +D + ++ + Sbjct: 366 REELHQQLLYQAHHDLLTGLPNRLLLKDRMQQTLTRASRQDRRVAFVCIDLDRFKQINDN 425 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---S 423 YG ++ C++ + L ++ + + + G E + VL ++ + L Sbjct: 426 YGHLVGDQCLKLVAERLRRRLRGEDTIARSGGEEFVAVLGELKSRQDAYRVAEDLLYVFH 485 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 L++ + + L +S + +S Sbjct: 486 EPFLVEGYRLELPASIGVALYPDDGTDASDLWRNADIAMYRSKKSGGNR-FTFVSDEISS 544 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 + L +RTAL +G +Y QP + G + +L G++ PD+F+P+ Sbjct: 545 AAAEANDLELMMRTALKEGGFEVYYQPQYLEDGTLCGMEALLRLHHPRSGMILPDRFIPV 604 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 L VLE + + R +VN+ PL + + G + R+ R Sbjct: 605 AEDSGLIMPIGNWVLEEVARQFMAWSQAGLPQVRIAVNVSPLQFMHSDFLGHVQRVLARS 664 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + + LE+TE N E + +L G ++DDFGTGY++ L +L + Sbjct: 665 GMPAELLELEVTETTVMRNIEEIARQMRELAALGVHFSVDDFGTGYSSLRHLHQLPIKTL 724 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 K+D FV+ I IV++I LA + + VVAE VE + Q +L L QGYL Sbjct: 725 KVDRSFVERITETNGTYSIVQAILSLAHSLGMQVVAEGVERKDQFEVLKALQCDVFQGYL 784 Query: 721 IGRPQPL 727 P Sbjct: 785 FSYPLEA 791 >UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Clostridiaceae RepID=A8MM18_ALKOO Length = 703 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 105/553 (18%), Positives = 200/553 (36%), Gaps = 30/553 (5%) Query: 206 PSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + +R + A + + ++ + GY F Sbjct: 140 ALMVSNQRYSLVVEGANDGLWDWDLINETYFFSLKHKGVFGYAPEELENTFEAWKSLFHP 199 Query: 261 -----PFLNLTWAVSTLCLLNYN--QNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRI 311 + + Y + + ++ + Sbjct: 200 EDLKEALEKVAAYLENPKEGIYENIYRIRCKNGEYRWILSRGKAVWEDGKAIRIAGSHTD 259 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFM 363 + L + H A D LT L N L++ E ++ + L IDN + + Sbjct: 260 ITEQQNLQNKLHTMAYYDTLTGLYNKEMLKEEMEKLLREAETEKKKMALIYLDIDNFKHI 319 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + G + I I L ++ + +L G E +VL +T + + Sbjct: 320 NDILGHEIGDKMITYIANILSHQVKAPNLVARLGGDEFAVVLGEIKTIEDVLQEIEKFSS 379 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 R + N + + + +TL L+ + + Sbjct: 380 YLRRPWNLNKQEFFISTSIGVALYPDHGKTLATLMQNADTAMFHIKENGRD-GVGIYAPY 438 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 ++ +T + + + +R + + +Y QP + + G + ++ L G + P+ Sbjct: 439 MTEKTLDYIQMSSQLRYGIHNEEFTVYYQPQIDLKTNEVIGTEALIRWLHPKKGFIPPND 498 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+P + V +++++ + + SVNL L + I ++ Sbjct: 499 FIPFAETTGYITEIEKWVFKTVVEQKVKWQKEGYDNFKVSVNLSSKMLTHPQLLAYIKKI 558 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 Y+IS + +E+TE N E + ++QL + IA+DDFGTGY++ L++L Sbjct: 559 LDEYNISGDYIEMEVTETAIIDNLEKATDVLKQLKELNITIALDDFGTGYSSLTYLQKLP 618 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 DI+KID F+K+I +A I++ + DLA + L VVAE VET+ Q L K + Sbjct: 619 IDILKIDRDFIKNIQDINDEAHILKLVIDLAHSLGLKVVAEGVETEAQLDYLRKNHCDIV 678 Query: 717 QGYLIGRPQPLAD 729 QGY +P P AD Sbjct: 679 QGYYFSKPLPEAD 691 >UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89S23_BRAJA Length = 618 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 105/578 (18%), Positives = 207/578 (35%), Gaps = 32/578 (5%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------ 227 L+ + L + T+ ++V Sbjct: 26 LGELVSAAYEANERDRHRVIDASAHTHDEVEQDLLRTREFLDTIVENIPIAVFAKCAKDS 85 Query: 228 -LLLCTPYENDFIAGYLVPVF-----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQ 279 +L D+ + I + + + L + Sbjct: 86 RYILLNRAGEDYYGLPREQMLGRTPEEIFPADVARVVNEQDRRVVDTGEPMFLEGHLLEV 145 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 S ++ ++ ++ R A D LT LPN A Sbjct: 146 GVNGHDRVVNSRKLLIRDGNGTPQYVVGVIEDVTEQLASQARISHLAHHDALTDLPNRSA 205 Query: 340 LE----QAPEQEA----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + E + L +D + ++ +G + + L + Sbjct: 206 FNAELDERLELAQEALTSFAVLSLDLDRFKEVNDVFGHPVGD-MLMRAAADRLAAEADGA 264 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ G E ++++ + + L +++ ++ +G + + Sbjct: 265 FVARIGGDEFMILMPDNARREDMLTLAERLVEVIGKELEIDDYLSQVGVSVGIAVYPDDG 324 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL ++ + E + + LL + +R AL+Q L++ Sbjct: 325 VDAATLLANADSALYRAKREGRAR-VRFFESETDQELRDRRLLQHDLRQALEQNQFLVHF 383 Query: 509 QPI--RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 QP + E G++ +L G + PD+F+PL + L + VL + A+ Sbjct: 384 QPQARMDGEVIGFEALLRWNHPTRGFVPPDRFIPLAEENGLIVQIGEWVLREACREAASW 443 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 P + +VNL P+ + ++ I ++ ++P + +EITE + ++ Sbjct: 444 PR---PLQVAVNLSPVQVQAGDLERSIHQILLETGLAPTRLEVEITEGVLIGDFTRALNL 500 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + +L G RIA+DDFGTGY++ L+ D IKID F+ ++ A IVR++ L Sbjct: 501 LRRLKALGIRIAMDDFGTGYSSLSYLQSFPFDKIKIDRSFISNLEATPQSAEIVRAVLSL 560 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 A A ++ V+AE VET+ Q+A L + + +QGYL+GRP Sbjct: 561 AHALNIPVIAEGVETEAQRAFLAREACEEMQGYLVGRP 598 >UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMJ7_9PROT Length = 829 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 96/483 (19%), Positives = 195/483 (40%), Gaps = 28/483 (5%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 P + + + NY + E M + Sbjct: 346 PLKKILNGIEIISKGNYENRIDITSKDELGAISS---------QFNNMADEIAKR---ET 393 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMR 372 + A DPLT +PN + E+ + L +D+ + ++ G + Sbjct: 394 QLDELAHVDPLTKIPNRVMFIETLEKSISRAKRLNTKLAVFFLDLDDFKNVNDTLGHYVG 453 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWN 429 + I + L +M+E++ + ++ G E +++ E+ + + + ++ Sbjct: 454 DKLLIEIAKNLSIVMRESDTISRIGGDEFNILIEDLESLSHIGEIAEKFIKQMTIPLYIE 513 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 N + + + + E LL ++ + + + +K++ Sbjct: 514 NNAITISGSIGISIYPDDGEDTTTLLKNADLAMYKAKDNGRNQ-YSFFSKELEVSLSKRI 572 Query: 490 LLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 +L ++ A+++ + LY QP + + + ++ + G ++PD F+PL Sbjct: 573 NMLKELKEAVNRDEFRLYYQPKFSLIDGSIKSAEALIRWDSKEFGFVSPDDFIPLSEDSG 632 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 + V++ + A+ G SVN+ + + +I + + ISP+ Sbjct: 633 EIVKIGAWVIKQACEDFASWSELGLGITQVSVNVSNVQFTRDDIVKVLSDNIIKSGISPE 692 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 ++ +EITE ++E ++ + + K G +A+DDFGTGY++ LKRL + +KID Sbjct: 693 SIEVEITESYMQEDSERALQILHDVRKIGVDLAVDDFGTGYSSMSYLKRLPINRLKIDRS 752 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F+ DI + D I R I LAK L++ AE +ET +Q L ++GV QGY+ +P Sbjct: 753 FIGDIPHDVDDVEITRIIVALAKTMGLAITAEGIETLEQMHFLQEMGVDEGQGYICSKPL 812 Query: 726 PLA 728 P Sbjct: 813 PYE 815 >UniRef50_B1XWM7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWM7_LEPCP Length = 751 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 101/625 (16%), Positives = 192/625 (30%), Gaps = 45/625 (7%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY-YLTRMIVSPHFAQIL 199 + V + PL + + + L ++ +L R + Sbjct: 86 FHVHGLWLLPLPMLVTGLALALWQLWIPTVGLSIGLVTGWLLTRNQELRSARMALQHERG 145 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 ++ + G+ V F L Sbjct: 146 QADATLQAITDSVITVDTGARVQYLNPSAERLAGHSLAEARGHAVGTLFQWDEPDAQTLE 205 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--------------------- 298 + + E + I + + Sbjct: 206 QALAECLQERRVVQVG-LALRLKAPQG-ERQVQIIASPVFERQIESGLSGDRLDRPLRRA 263 Query: 299 -----ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------ 347 + + + + +A D LT LPN L + Sbjct: 264 PADHDRDRVTGAVLALSDVTEALRAADKLQHEATHDALTGLPNRALLSDRLQHAVLGAQA 323 Query: 348 --AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D + ++ G ++ + L + ++ L + G E +++L Sbjct: 324 GQRSVAVLFIDLDRFKRINDSLGHRHGDAVLKEVASRLQQCCRAHDTLARWGGDEFVVLL 383 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + + + + + G + + LL Sbjct: 384 EDVPSRDAVAARAAQMIDSVTLEFAIDQVEVACGCSIGIAMAPQDGVAVDALLAMADTAM 443 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 + + + + T + + L +R L+ +L+ QP N + G Sbjct: 444 YRGKSRGGKR-FEFYASEMPSWTREWLALETRLRHGLETQSFVLHYQPQVNLKTGQLVGL 502 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + +L + DG + P +FLP+ + L V+ + LA SVN Sbjct: 503 EALLRWRQPDGELWLPGRFLPVTEETGLILPIGEWVIREATQQLARWRDQGLPLVPVSVN 562 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L + + + I + LE+TE A ++ + +L G ++A Sbjct: 563 VSTRQCLDRRLVQVVAEALLCSGIDAGLLKLEVTESTAMADLGHLRGLLVELRALGVQVA 622 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTG+++ LK Q D IKID FV+DI + A IVR+ LA L VVAE Sbjct: 623 MDDFGTGFSSLSHLKHFQIDQIKIDPSFVRDISRDANGAAIVRATIALAHGLGLPVVAEG 682 Query: 699 VETQQQQALLHKLGVQYLQGYLIGR 723 VE+++Q A L QG+L R Sbjct: 683 VESEEQMAFLSAHHCDIAQGFLYAR 707 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 91/517 (17%), Positives = 186/517 (35%), Gaps = 20/517 (3%) Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 F I +L P + + + N + + Sbjct: 6 AHRIIRVNPAFTTLTGYSAERITGSLASELYLLPEGMEREVLKKEAVWSGNVSIKKENGE 65 Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 L + I ++ + D T LP+ + QE Sbjct: 66 ILQGLQTTVSTTVEDGGLARYIHIIKPADAATQE----GSYDQNTNLPDRNMFQHILAQE 121 Query: 348 A--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + ID+ + ++ +G + + + L++ N+ + L G+ Sbjct: 122 QENAKRKHFQLGVLYIDIDHFKVINDSFGYLKGNLLLGQVAERFKALLRGNDLIASLGGN 181 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 +++L+G + L +N + M F G+ + + LL Sbjct: 182 RFVVLLTGLAHPEDATIVTLKLMQALESGFCIDNHEVVMTISTGIAIFPGDGDDSEALLQ 241 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 A + ++ + + +R A+++G+ +L+ QP N Sbjct: 242 SAEQSMYSVKADGGN-NYQFFKASTQSSAINRLNMESEMRKAIERGEFVLHYQPQINATS 300 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 G + ++ + G++ P F+ + + + V+ + Sbjct: 301 GHVVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIGEWVMYEACRQNKAWHDAGLAE 360 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 + +VNL + + ++ K+ ++P + LEITE + E+++ +E++ Sbjct: 361 LKVAVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEITESVIMKDIEATIALLEEIAS 420 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +AIDDFGTGY++ LKR D +KID F+ D++++ D IV +I L+ L Sbjct: 421 MGLSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVISSEDDGKIVEAIIGLSHNLKL 480 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V+ E VE +Q A L + +QGY +P P + Sbjct: 481 NVICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADE 517 >UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWY3_RHORT Length = 683 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 111/654 (16%), Positives = 216/654 (33%), Gaps = 27/654 (4%) Query: 102 AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI-GIKCSMYLVGSFFDFPLKISTFFGDA 160 +L + W L + +L ++ A Sbjct: 26 GAGGRRLCGSVVLSAGKILSVDKTLWQALGLSAESLSGLPFLSFLEDPSREVLAARLRLA 85 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + + L + + + IL + L Sbjct: 86 GPPWDLRTALRVDGRAIPVVLRGDGAADRTTDTPLQVILITLAPQEGEVEPVSQSALFDH 145 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV-------GKLRYPFLNLTWAVSTLC 273 L V+L A + + LG G L W Sbjct: 146 IPLGVMLSDGLGRIAYANPAFLAEDIAAVRALLGATPQALATGYLHEGLARTLWEDLLCG 205 Query: 274 L-LNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE-WLNRRWHLQALTDPL 331 + + + L + ++ + + + Q D L Sbjct: 206 RVWRNDVDLPTADGQRTHSRLTIIPLRRDDGAVDRLMTVIEPRSPATDSQAWQQVNHDTL 265 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN + + + + +D+ + ++ G ++ + L Sbjct: 266 TGLPNRVLFQDRLLTALASARRRNDQLAVLFVDLDHFKTVNDSLGHSFGDQLLQQVATRL 325 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNN-TGLDMGYGA 439 +++++ L ++ G E + L+G + + N + R + +G Sbjct: 326 SQCLRDSDTLARMGGDEFTIALTGDGHQRDYAMIANRILETLRRPFTLEGGHEVLIGSSI 385 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + E + LL ++ A A E ++ + + L N +R A+ Sbjct: 386 GITLFPNDAEDVDTLLRNADTAMYRAKASGRN-AFQFFTEEMNREIQSHLDLENALRRAV 444 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 DL ++ QP+ + + ++ D G + P +F+P+ + L VL Sbjct: 445 RAMDLTIHYQPVVDSATLAVVSAEALVRWPLADKGFIPPSRFIPVAEELGLIDEIGGWVL 504 Query: 557 ESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + K R SVN+ L + A R+ + + + LEITE Sbjct: 505 WNACTQAKVWQAQGAKAFRVSVNVSWRQLRNPDFALRVREALEGTGLGAAFLELEITEGM 564 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + + + L + G +AID+FG+G+++ + L++ I+K+D V D++T+ Sbjct: 565 VLRDPQGIAPALMALSEMGVALAIDNFGSGHSSIKCLRQFPFSILKLDRSCVADVLTSHE 624 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA++V + +A+ L+VVAE VET Q L + +QGYL GRP P D Sbjct: 625 DAVLVETAAIMARRLGLTVVAEGVETHAQLEFLREHYCDLIQGYLFGRPLPPED 678 >UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GAF n=1 Tax=Deinococcus deserti VCD115 RepID=C1D398_DEIDV Length = 960 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 106/627 (16%), Positives = 220/627 (35%), Gaps = 38/627 (6%) Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 P+ + + + + + G D ++ + L L R+ Sbjct: 339 FYAPLNVWLRLKIYAHSTGLTVLMQNITGKKAEEQAQGDRNAILEMTVQGKPLSEILHRV 398 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 D ++ +R + A + L D V Sbjct: 399 ----ATMVEAQVPDYVCAVLLRQRGRLAVYAAPSLPPEVRLALNGAPDHDGICGPAVLNG 454 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-------------LA 296 + P V L + + L + + Sbjct: 455 EVLMVEDLTTDPAYADWQMVLLPHQLRACVSLPVKDGGQSVLGAMTLFAKSPGVLPPEVL 514 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 ++ + L + L + QAL D LT L N + E++ ++ Sbjct: 515 RVLDKARHLTAVAV---EHHHLTEQLKYQALHDALTGLANRQLFEESLQRALDAAQHVGG 571 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +DN + ++ G +R I L +Q + + ++ G E ++L Sbjct: 572 ELAVLFIDVDNFKSVNDSLGHEAGDQVLREIASRLKGCVQHGDTVARISGDEFTVILP-F 630 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 +E + + S +H + + + + L + Sbjct: 631 ASESDALEVARQITEVLSDPMHVVDRQIKVSASIGITLTPEGGSDPEMLHRTADLAMYHA 690 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 + ++ ++ + ++ L + +R A + D L+ QP+ + + G + + Sbjct: 691 KS--RKMSFAVFRSEMNRRAYERFQLTSFLRQAAEHNDFELHYQPLIRLFDGQLTGVEAL 748 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 + + G ++P++F+PL + L VL+ + R +VN+ Sbjct: 749 VRWQHEELGAVSPERFIPLAEETGLIESIGAWVLKEACRQGVLWQAQGHSQLRVAVNVSA 808 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L ++N + R + + + LE+TE E S++ + QL G I++DD Sbjct: 809 LQFERRNFVETVARCLEETGFPAEQLELELTERVIMRQVEESVWRMRQLRDLGVWISVDD 868 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L RL +I+KID FV + + +V++I LA++ L +AE +ET Sbjct: 869 FGTGYSSLSYLPRLPINILKIDRSFVTGLSETSPTFPVVQAILSLARSLHLEAIAEGIET 928 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ ++L LG QG+ GR +P + Sbjct: 929 NEELSVLKHLGCDLGQGHFFGRAKPAS 955 >UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF4_JANMA Length = 914 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 109/605 (18%), Positives = 206/605 (34%), Gaps = 20/605 (3%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 +VG D L T D + LF +I ++ L + + Sbjct: 299 AIVGMSQDSVLARYTVHRDTIRNAAIAITTFLFVFAVIAVVMSLRLAWKSHRLDAVRNTY 358 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R + V ++ G V +R Sbjct: 359 RIATEFGNEGYYIWSAIQDRNGYLVDFEIIDCNERGATFFGTSKEKLLNTQLSTVEFIRG 418 Query: 261 PFLNLTWAVST-LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 L + Y +F + + + L R + Sbjct: 419 YLYTLMQQSRIAMEKGFYEDDFEMQAHNQGWIHKRMLRCED---GLAVTFRDVSDRKAHE 475 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 H A D LT LPN L E++ + + +D+ + ++ G Sbjct: 476 EELHRLATKDTLTNLPNRYWLMNHLPKALNEANEKQDSLAVLFIDLDDFKNINDTLGHSS 535 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW 428 ++ + L +++ + + +L G E L+L + + + N + + Sbjct: 536 GDSLLQVVASRLESVLRPGDSVVRLGGDEFTLLLESLPLQEDISLIANRIMQTFNQPFEI 595 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 L + R+ + + LL + A + ++ + + + Sbjct: 596 QQKMLTISASMGISRYPFDGRDAETLLKNADIAMYSAKADGKNK-VRVYDKKLYEEIELR 654 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 V + A+ + ++Y QP G + ++ + G++ PD F+PL Sbjct: 655 VDGERQLARAIQEDHFIVYYQPRVEAQTGRMVGMEALVRWAHPERGLIAPDHFIPLAEST 714 Query: 546 NLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 + V+E + +A SVN+ + N++ I +Y + P Sbjct: 715 GMILPLGRLVMEKVFCQIAAWQFQKLAVVPVSVNVSARQFDEGNVSEFIASCLNKYAVDP 774 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + +E+TE N E I + G +I +DDFGTGY++ L + D++K+D Sbjct: 775 RFIEIELTESAMMGNFEQVRGEISSISALGIQIHVDDFGTGYSSLSLLYKFNMDVLKVDR 834 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F I + SI +AK + VVAE VET +Q +L +LG +QGYL+ +P Sbjct: 835 AFTSQICNGKGGEIFFSSIVSMAKVLKMRVVAEGVETIEQLRVLQQLGCDEIQGYLVSKP 894 Query: 725 QPLAD 729 P +D Sbjct: 895 IPSSD 899 >UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC21_CELJU Length = 1306 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 103/431 (23%), Positives = 178/431 (41%), Gaps = 22/431 (5%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLM 370 + + A DPLT LPN R L + + +D+ + ++ G Sbjct: 858 QEQIYRLAFFDPLTRLPNRRMLMDRLRLIIAQSARTSQQGALLFIDLDHFKLLNDTRGHH 917 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNSR- 424 + + + + +++ + +L G E ++V + +H L+ Sbjct: 918 IGDQLLVQVAERISSIIRTTDLAARLGGDEFVVVFDNLGTDPDKAALEAKHRAEQLHELI 977 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + F+ N ++ LL Q+ + + + Sbjct: 978 NLPYPLQQSVYHCTISIGVNLFNANNTSIDDLLRHADVAMYQAKDGGRN-TIRFFDPHMQ 1036 Query: 483 GQTTKQVLLLNTIRTALDQG-DLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFL 539 + K+ + +R+A + G L Y Q N E G + +L + G + P F+ Sbjct: 1037 SRLEKRAEIEADLRSAHESGTQLTPYYQAQVNHTGEVLGAELLLRWIHPRKGTIAPGDFI 1096 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 P+ Q L QV+ K L +VN+ P+ Q + +I Sbjct: 1097 PVAEQTGLIVAIGRQVIRMACKQLQCWQQQPGFGHLTLAVNVSPIQFNQSSFVEDVISCV 1156 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 Y ++P + LE+TE N E S+ +++L +FG A+DDFG GY++ LK+L Sbjct: 1157 LDYDVNPNHLKLELTESSLLKNVEHSIEKMQRLQEFGISFAMDDFGIGYSSLSYLKKLPL 1216 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV+DI + DA+IVR+I +A +L+V+AE VET+ Q+ L + G Q Sbjct: 1217 DQLKIDRTFVRDITIDPNDAIIVRTIIAMAANMNLNVIAEGVETELQKQFLEQNGCLLFQ 1276 Query: 718 GYLIGRPQPLA 728 GY G+P PL Sbjct: 1277 GYYFGKPMPLD 1287 Score = 70.0 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 69/248 (27%), Gaps = 21/248 (8%) Query: 14 FTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFC 73 + L + + ++ ++ + I L W+P + ++ + + W V Sbjct: 18 WPLQLAVALAY-GITGWLGLNIPLSDGNITLFWLPTGIAVAAFYRYSWTLWPGVFLAALI 76 Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 +L + LG+ +L C +LR R + LG++ Sbjct: 77 VSLSTGLPWLNSGLIALGNTLAPLL-TCYLLRRTDSNITRLTPRDSIGFLLFSALGMIVS 135 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 L+ F + + + V + L Sbjct: 136 AATGSLSLLLLGREVFSVAQGF----------LNWWMGDSLGVFLAAPLL---------V 176 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 +F+ RR +A +AAL L L + I ++ FI Sbjct: 177 NFSLGECRRALAQPRELILIILASLVVAALCFPLNNLTSHSPAGVIHLPILFTSFICMAW 236 Query: 254 GVGKLRYP 261 + P Sbjct: 237 AGLRFGLP 244 Score = 44.6 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 36/349 (10%), Positives = 75/349 (21%), Gaps = 30/349 (8%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT 74 L ++ LS + + + FL W + S+ +V G Sbjct: 129 ALGMIVSAATGSLSLLLLGREVFSVAQGFLNWW---MGDSLGVFLAAPLLVNFSLGECRR 185 Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF---WLGLV 131 L +++ + VV C L + ++ W GL Sbjct: 186 ALAQPRE-----LILIILASLVVAALCFPLNNLTSHSPAGVIHLPILFTSFICMAWAGLR 240 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV---LIYNMLFYYLTR 188 + L I + + + L+ M+ T+ Sbjct: 241 FGLPGASLSTLGFGLVALVSTIQGLGPLSFDSTQLSAWMIWIYGFCMTLLGLMITSAHTQ 300 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV-LLLLLCTPYENDFIAGYLVPV- 246 + + H E + L + L + + + Sbjct: 301 LRTASHQLDETSHEQAQQKKHLEAIIHAIPDLLIETNREGHCLWANGPTHWHGLHSHELP 360 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-- 304 + L + + L +A Sbjct: 361 GRELRELLPSDAWQTWSQAIHEADDWGISQGKSIHLIQGTQSLWYELSIAKSSGQRPHED 420 Query: 305 -LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSF 352 + +VR + + QA L N + E + Sbjct: 421 RFVCLVRDITKRVNI-----YQA------DLANEQRFRNIFEATRNIAV 458 >UniRef50_C5SBC3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBC3_CHRVI Length = 1147 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 115/720 (15%), Positives = 235/720 (32%), Gaps = 48/720 (6%) Query: 45 AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAIL 104 PL ML+ + + +C + + LS + T V + L Sbjct: 428 RGQPLRDMLTAIVAYIEEIAPHAICSIHLLDPETQTLSTAAALRLPEFYTRAVEGSRVGL 487 Query: 105 RWQLGTRWRYGLTSRYVWQRLFWLGLVTP--IGIKCSMYLVGSFFDFPLKISTFFGDADA 162 +G+ +T + V + L P + M + I G Sbjct: 488 G--VGSCGTAAVTGQRV---VIADLLSHPDWSAYRDLMLQTPLRACWSQPIIGHAGQVLG 542 Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + + + + I R + E++A L Sbjct: 543 TVAIYATRVMEPS-----PADLEMIESAAELAAIVIERDRAENATRQAEEKARLLLESTT 597 Query: 223 LSVL--------------LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY--PFLNLT 266 + + I + P+ G+ P L Sbjct: 598 EGIFGLDLEGRVTFINPAAANMLGYEPETLIGQPVHPLIHHSRANGLPLPPECCPILATL 657 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHL 324 ++ + + + + + + + Sbjct: 658 QQGQDC--HATSEVLWRRDGSCFPAEYWATPVRRDHRIEGAVVTFHDISARQRAEAEIQH 715 Query: 325 QALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT LPN ++ + + L +D+ + ++ G + + Sbjct: 716 LAFHDSLTGLPNRLLFKEELGQALAALRRDDQRFALHMLDLDHFKDVNDSLGHPVGDELL 775 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGL 433 R++ L + + + L + G E L+ S G + + + + + Sbjct: 776 RAVAERLTAITRGTDVLARFGGDEFALLQSKIGEIGDAAALATKIIEAFGQAFWIDGNRI 835 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 D+ D + ++ + ++ + ++ Q +++ + Sbjct: 836 DINTSIGILIADQACHDVDDIITRADVALYKAKEAGRG-THAFFADSMTQQLRREMEIAR 894 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 + A+ +L + QP + G + ++ G+ P FLP+ + L Sbjct: 895 ELIQAIQNDELFIDYQPQFDLDSGRLVGMEALVRWHHPREGVRQPAAFLPVTEKRGLIRP 954 Query: 551 FDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL++ + R +VNL + + I+ + ++ P+ + L Sbjct: 955 LSDWVLKAACCQIRDWSDRGLEFGRVAVNLCAQQVGDPDFGDNILAVLEQTGARPEHLEL 1014 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E TE + + +I +L + G AIDDFGTG+++ + L++ + D IKID F++D Sbjct: 1015 EFTETVLIAADARTQADIARLSELGIHFAIDDFGTGFSSMQYLRKFRTDKIKIDREFIQD 1074 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + DA IV++ L A L +AE VET++Q L + G + +QGYL GRPQ D Sbjct: 1075 VTQDAGDAEIVKATIALGTALGLITIAEGVETEEQAEFLRRHGCRQVQGYLYGRPQSPED 1134 >UniRef50_Q47VW2 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47VW2_COLP3 Length = 831 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 103/562 (18%), Positives = 209/562 (37%), Gaps = 32/562 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 Y ++ + ++ ++ L E + + L V L+ + + G +V Sbjct: 270 YSELVLRRRETVLLTYQEMMSLHLEGETKKPQDDIHSWLGVPLIY------SGQLLGVMV 323 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + T + ++ VS +F + L L Sbjct: 324 LQSYYYKTTYNQQDAELLNFVSNHVSAAIKRRELADFERRSHELLEQQVKLRTLALEDE- 382 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCL 355 + + A D LT LPN + L Sbjct: 383 -------ITHRKQAEKLLKHTAAHDSLTGLPNRMVFLDLLNHAIACAKRKDDFSFAVLFL 435 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G ++ I R LL ++++ + + +L G E ++++ ++ Sbjct: 436 DLDRFKVVNDSLGHHAGDVLLKIIARELLAIVRKVDTVARLGGDEFVILIEDLKSNNEAF 495 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + +N + G + +L + + Sbjct: 496 EVAQRITAFLQQPFTIDNQLVYTGTSIGISFSNIRYTDADTMLRDADTAMYHAKDNGRGR 555 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + ++ + + + L IR A+ + + Y QPI N++ +G++ + Sbjct: 556 -YEVFDDSMHQKVQNALSLEADIREAITWQEFIPYFQPIIKLDNQKLKGFEALARWQSTK 614 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSVNLMPLTLLQK 587 G + P+ F+PL + +L D+Q++E + L + S NL Sbjct: 615 RGFVYPNDFIPLAEETDLIKEIDIQIIEKSCQQLKCWHDELGCDDLYVSCNLFSKQFFST 674 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ I ++ KR ++P + +E+TE NAE + N++ L G +I +DDFGTGY+ Sbjct: 675 SLPQDIEKVLKRTGLAPHHLRVELTERALLENAEIVLTNMQALKNMGVKILLDDFGTGYS 734 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L R D++KID F+ ++ + + I+R+I DLA +S V E +E+ L Sbjct: 735 SLGYLHRFPIDVLKIDRSFISNVDEHNNNRAIIRTIVDLANNLQMSTVGEGIESLADAEL 794 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L ++ Y QGY +P D Sbjct: 795 LQQMDCVYGQGYYFAKPMSSQD 816 >UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=8 Tax=Chroococcales RepID=B7K4E5_CYAP8 Length = 840 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 100/564 (17%), Positives = 207/564 (36%), Gaps = 25/564 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYL 243 I F ++ A + R A +LL ++ + GY Sbjct: 265 IRLYLFDITKYKTREAKLTTGKDRYRLFVEQATEGILLVNCETQYIIEANQAYCHLLGYT 324 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYSLAFIL-AVLIS 300 + + + ++ + T + + S++ + Sbjct: 325 TAEIIGLSLHQLIAIDKAIIDQELSCVTSETPYFIKESIHRHKDGSLISVSGKINRTTYQ 384 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 ++R + + QAL DPLT LPN + Q + + Sbjct: 385 GQEIFCLVIRDIRDRKQAEEQLQYQALHDPLTNLPNRESFNQKLVLALDHAQRYQHLMAV 444 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + ID+ ++ G + + S + L ++ + + + E +L+L + Sbjct: 445 MFVDIDSFTNINNTLGPSIGDRLLDSFGKRLSSCVRTGDTVARWGSDEFVLLLPQIKNTE 504 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + ++ L + + + E + LL ++ Sbjct: 505 DTVKLAQRIFDNLQVPFILDDHRLPVKCSIGIAVYPQDGEAGETLLKNAGTALGRTKEQG 564 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARL 526 +S + + L + + L++ L+ QP N + G + +L Sbjct: 565 RNH-YQFYNPNLSSEAALLLRLESLLHQGLEKKQFFLHYQPQINLKTKKVVGMEALLRWE 623 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL 585 GI+ P KF+PL + +L VL++ + + D VNL + Sbjct: 624 HPSLGIINPQKFIPLAEKTDLILHLGKWVLQTACEQNISWQKDGLPPISIGVNLSAREVQ 683 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q N+A + R+ + PQ + LE+TE + + ++ L G RIA+DDFGTG Sbjct: 684 QPNLAEVVARVLNDTGLDPQWLELELTEMSLRQHLTQARKSLRDLKNLGVRIALDDFGTG 743 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 +++ L++ +K+ F++D+ + + I+ + ++K ++ +VAE VET++Q Sbjct: 744 FSSLGYLQQFSFRTLKLHQAFIRDLRGTSEELGIISAALAISKGFNMRIVAEGVETEEQL 803 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 +L L + +QGY RP P+ + Sbjct: 804 KILSNLNCEEIQGYCFSRPLPVKE 827 >UniRef50_Q2RNE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodospirillaceae RepID=Q2RNE1_RHORT Length = 951 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 111/585 (18%), Positives = 207/585 (35%), Gaps = 27/585 (4%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL---GKEKRAFTLSWLAALSVL 226 L+L +F + R I + A L A VL Sbjct: 354 LALSEVRTEGRRIFIAVIRDITQRKETEGALAATRARLQTIADNVPGLVFQRELTAEGVL 413 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF----LNLTWAVSTLCLLNYNQNFL 282 L + ++ + + L + S L + + Sbjct: 414 RFLFVSNGVHEVLGITPEALLADGELFLGAMDPDVRAAFRETLRQSASRLEPMEEDIKLR 473 Query: 283 QGVETEYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 E L ++ + + + A DPLT L N Sbjct: 474 GRDGEERWLRGWSRPSRREDGSVVWDGVTLDVTDRKRAEDKLTFLAYYDPLTGLGNRSLF 533 Query: 341 EQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 ++ + + +D ++ G M + ++ R L ++ Sbjct: 534 IDRFDRARRFAESIQAWVAVLSIGLDRFGMVNATIGHTMGDKVLIAVTRRLQQSLEAGSI 593 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 + + G L++L+G L+ +V + I D+G + Sbjct: 594 VCRAGGDRFLVLLTGLTDRADLREVVATIQDAFVPPIEVEGQQFDIGLTIGGALHPEDGR 653 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L+ ++ A + + + + + +R L++ + + Y Q Sbjct: 654 EAETLIMHADAALHRAK--GGGGAFQMFTPEMGARAAHLLTIQHKLRRGLERHEFVAYFQ 711 Query: 510 PIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + + + G++ P KF+ + ++ L QVL+ +WL+T Sbjct: 712 PQVDLRSGLITGCEALARWNSPEDGLVPPGKFIGVAEEYGLIDAICGQVLDDSCRWLSTW 771 Query: 567 PCDKKG-PRFSVNLMPLTLLQK-NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VN+ + + + ++ + P+ + LE+TE A S+ E+++ Sbjct: 772 RARGLPQVPVAVNISGRQFQNARQLVAMVDQALRQSGVDPRLLELELTESSAMSDPENAI 831 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L + G AIDDFGTGY++ LKR +KID FV D+ T+ DA IV++I Sbjct: 832 AVVNLLRERGVSCAIDDFGTGYSSLSVLKRFPIGKLKIDRSFVMDVTTDPNDAAIVQAII 891 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A A +L VVAE VET A L ++ +QG+L RP P D Sbjct: 892 AMAHALNLRVVAEGVETLDHLAFLREVHCDAVQGFLFARPLPGED 936 >UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7N9_AZOSB Length = 889 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 109/750 (14%), Positives = 236/750 (31%), Gaps = 38/750 (5%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT 74 +V + + + S + ++ + + ++ + L G+ T Sbjct: 131 GRHIRARLVDPAQTSALDLRVMHASLRAAGVRVESVLLADMNGRYAFQRDLDRLIGLLLT 190 Query: 75 NLWNFHLSFLQTAVMLG--SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 + + A + + +V + + + R + + Sbjct: 191 AMMLVVIGLRYRASVRQRHALLRLVDSEARLRAFAYAMPDTAFILDREGRYIEVFGMGRS 250 Query: 133 PIGIKCSMYLVGSFFD--FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 + + FD + F G T +++ ++ + ++ R+ Sbjct: 251 LTPYGHERMVGATVFDYFPRPQAENFVGVVRDALTRGEVVRYEYSLRLAGGTRWFEARVA 310 Query: 191 ----VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAG 241 + + + + + V++ L I G Sbjct: 311 PVDSMQRVVWVSRDVTERRRAEERIRLHAVALEGTRDGVMVTDLHGRIQSVNRAFTSITG 370 Query: 242 YLVPVFFIIF--TLGVGKLRYPFLNLTWAVSTLCL-LNYNQNFLQGVETEYSLAFILAVL 298 Y L G+ F W+ + ++ + Sbjct: 371 YSEEEAIGKTPGLLKSGRHDPSFYRGIWSALLSGGYWQGEIWNRRRNGEVAPHWMSISAV 430 Query: 299 ISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + R A D LT LPN + Sbjct: 431 GEQGHPYEHYVAVFTDISQLRQFEERVSHLANYDLLTDLPNRLRMSDCLETAIAAARRSH 490 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + +D + ++ G + + + L ++ + L + G E LLVL Sbjct: 491 TQVGVMLVDLDRFKNVNDALGHALGDELLAGVAERLRKHLRHGDTLGRYGGDEFLLVLEQ 550 Query: 408 PETEGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 G + + + L + + + +T L+ Sbjct: 551 LRDAGEAAAVARTMNSALDQPFLMRGGQELYIKASIGISLYPEDGDTAAELIKDADAAMY 610 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 ++ +E ++ +++ L + +R ALD+ +Y QP+ + E G + Sbjct: 611 EAKRLGRN-TFRYYQEDLTRTANERLALESRLRRALDESMFEMYYQPLVALNSGEVLGAE 669 Query: 521 EILARLKYDGGI-MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVN 578 ++ DGG + P F+P++ + + A V + + + ++N Sbjct: 670 ALVRLR-PDGGPRIGPADFIPVLEESGMIAELGRWVQREVCRQGRAWLDAGYDFQLLTLN 728 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L + + + + + + + +EITE ++ + +L G R++ Sbjct: 729 LSAEEVRRGGVVDNLREVLAETGFPAEKLEVEITESGLMQRGSEALDFLYELKGLGVRLS 788 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LK + +KID F+ DI + D + +I LA+ L V+AE Sbjct: 789 IDDFGTGYSSLSYLKLFPVNKLKIDRGFITDIPEDQNDVQLTTTIIALARNLGLDVLAEG 848 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET+ Q+ L + G QGYL P A Sbjct: 849 VETEAQRTFLAEKGCDAYQGYLCSPPVEAA 878 >UniRef50_Q0A9N6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9N6_ALHEH Length = 696 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 103/591 (17%), Positives = 196/591 (33%), Gaps = 28/591 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 V+ + + + A+ R A ++ A SW++ Sbjct: 91 PVPVLVNAAPLYGEEGRIAGAVVSFQDVRERQVAREALERREAELAEAQQIAHLGSWVSD 150 Query: 223 LS------VLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 + G + ++R + Sbjct: 151 FVRNEIRWSDEVYRIFGLTPGEWGGTEAAFMEAVHPEDRARVRQAIDESMRPNGPP--YD 208 Query: 277 YNQNFLQGVETEYSLA---FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + + + + + + +V RR + D LT Sbjct: 209 IEHRIQRPDGSVRIVHQKGTVAFDADGRPLRMAGVVHDITEMREAERRLQYLSHHDVLTE 268 Query: 334 LPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN + Q + + +D ++ G ++ + R L Sbjct: 269 LPNRTLFQIRLRQAISEAQAEKGCFALVHIGLDRFRSVNEGVGHHAGDQVLQQVARRLEA 328 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWG 442 ++ E L +L G E ++L+G + + V+ L + + A Sbjct: 329 CLRPGETLARLGGDEFAVLLAGAGDDAEVAAGVDRLLAPLQELFRVGEDEFYVPGSAGVA 388 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + + L+ + ++ L ++ + +V L + +R A+D+ Sbjct: 389 LYPHDCSSPGELMQRAEAAMHRAKQEESTR-LAYYSAEMNQRARARVALESRLRRAVDRM 447 Query: 503 D-LLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + L QP G + +L + +G + +P F+P++ Q L ++ Sbjct: 448 EGFYLDYQPRVETATGRIIGLEALLRWREGEGPVHSPATFVPVLEQTGLIMELGEWIVGE 507 Query: 559 LLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + + +VNL + G I + P + LE+TE Sbjct: 508 ACRQARAWRQAGLPPVQLAVNLAAPQFRDPAMPGIIEGALGEAGLPPGNLELEVTESMLM 567 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 S + + Q G R+A+DDFGTGY++ L+R D++KID FV D+ + A Sbjct: 568 REVTSVIDTLGQFRDMGVRVAMDDFGTGYSSLAYLRRFPIDVLKIDRSFVNDLYADESGA 627 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I+R+I LA + VAE VE +Q A L + G +QGYL RP Sbjct: 628 AIIRTILSLADNLGMESVAEGVERPEQHAFLCREGCHAVQGYLFSRPASPE 678 >UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMB6_LYSSC Length = 782 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 99/537 (18%), Positives = 202/537 (37%), Gaps = 35/537 (6%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + ++ + L + + F+ + + + I+ ++ V + P L Sbjct: 251 LTNAKTGWRIIAEIDQLKIAQSVKPIFNVTLFVLLFAICLTSILISVIVRSITKPLQVLV 310 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 A + + + + + + E+ L ++ A Sbjct: 311 DASVKVSEGDLSGHVIIKSQDEF------QKLGDAYNHMI-------------DSLSKFA 351 Query: 327 LTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 DPLT LPN R EQ + S + +DN + ++ G ++ Sbjct: 352 FYDPLTNLPNRRQFVFTLEQAITQASSEQSKFSIIFIDVDNFKQVNDTLGHSAGDELLQK 411 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDM 435 + L + + +L G E +++L L+ M++ L + + + Sbjct: 412 VAEQLQSSIGSEGVVARLGGDEFVILLEHRADHAYLEKMLSSLRDSFVQPFTIHGQITFV 471 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + T + LL ++ + ++ K+ + I Sbjct: 472 QMSLGIASYPIDGVTQEELLKHADIAMYKAKESGGN-NHRFFDNKMNELVIKKNQIEQMI 530 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL + ++ ++ QP + G++ ++ + G ++P+ F+P+ + + D Sbjct: 531 RLALARNEINVHYQPQIEPATGKLRGFEALVRWKSPELGFVSPEDFIPIAEKTGFITQID 590 Query: 553 LQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ SVN+ L L + + ++ + + P+ + +EI Sbjct: 591 EWVMYQACLKNVELQHQFGYPFLMSVNISALQLERTDFVDKVQLILNETKLKPEYLEIEI 650 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + ESS+ + +L G +IA DDFGTGY++ L L +KID ++++ Sbjct: 651 TESILVESFESSICILRKLENLGVKIAQDDFGTGYSSLNYLSLLPIHTLKIDRSLIQNMT 710 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + T + I+ SI LA VVAE VET++Q LL + ++QGY RP Sbjct: 711 SATAEKTIIESIIQLAHKLGHDVVAEGVETKEQYILLKEWNCDFVQGYYFSRPVSED 767 >UniRef50_B5W2K6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5W2K6_SPIMA Length = 612 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 89/499 (17%), Positives = 182/499 (36%), Gaps = 23/499 (4%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCL 305 G R + + + + +E+ + + + Sbjct: 96 PRILQGEKTDRTILERMKLDLKDGGVFYGQTINYRKDGSEFVNEWHIEPIYNDRQQITHY 155 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QEAGKSFCCLR 356 L + R + + R +A D LT L N + Q+ + Sbjct: 156 LAIQRDVTERQNQHNRLIYEANHDSLTGLYNRGYFITELQKAIDRTQNCQDYLFGLLFMD 215 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ +G + I L ++ + L + G E +++ + + Sbjct: 216 VDRFKLINDSFGHQAGDQLLIEIGDRLQSCIRPQDILSRWGGDEFAIIIDDIQDLSEISQ 275 Query: 417 MVNILNS---RQIHWNNTGL--DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + N + + I L +L ++ Sbjct: 276 LTNKIQQTIKKPIILGEDHLETVTSLSIGIALSSMGYNCSADMLRDADTALYRAKDRGKG 335 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + + + + +Q+ L +R AL + +LLL QPI + G + +L Sbjct: 336 -SYAIFTQAMHHRVRQQLQLETDLRYALKREELLLNYQPIISMKTNRIVGCEVLLRWEHG 394 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQ 586 G+++P++F+P+ + L + V+E C P SVNL L+ Sbjct: 395 TLGLISPEQFIPMAEETGLIVKMGDWVIEQACIQAKQWECIYQDAPPFLSVNLSTKQLIN 454 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + I +I + + SP+ + E+TE + E ++ + ++ G R+ IDDFGTG+ Sbjct: 455 QGIVEKIKEILEATKCSPELIRFELTETAIAESTEVAVTTLRKIKDLGIRLCIDDFGTGH 514 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ RL D +KID F++ + + I +I LA++ + +AE +E +Q Sbjct: 515 SSLSRLSCFPIDTLKIDRSFIQGMSASEHQTKIAYAIVKLAQSLGMETIAEGIENLEQFC 574 Query: 707 LLHKLGVQYLQGYLIGRPQ 725 L G + QG+L+ +P Sbjct: 575 QLKSWGCELAQGFLMAQPI 593 >UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7J2_BACCO Length = 559 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 102/477 (21%), Positives = 186/477 (38%), Gaps = 21/477 (4%) Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT- 328 T N +F+ + L LA + ++ + R R Sbjct: 80 QTALEDNKAVDFIHHSDARRILHTSLAGMNGG-EWVIAITRDVTALLDGERMLPDARTYQ 138 Query: 329 -DPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 DPLT L N AL ++ + + +D ++ + G + ++ I Sbjct: 139 LDPLTGLWNRHALLDRLNRKTAEAKKGAPHPAVLYIDLDRFKYFNDILGQHVGDEILKRI 198 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMG 436 L L + ++Y+ G E +++ +G + ++ M + + + Sbjct: 199 AIRLKQLPFSDYEVYRQGGDEFIVLTAGC-SREEVKQMAEQILALFYDPFKIEGEDYFLT 257 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F + E + L+ + + + +L+ +R Sbjct: 258 PSVGISLFPEDGEDGETLIKHADTALFKVKERGKGH-FLFYSKKMDADFHNYILMEAHLR 316 Query: 497 TALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 A+++ +L ++ QP + + ++ +L G + P KF+PL + L Sbjct: 317 RAIEKNELAVHYQPQVQLDTGKIKSFEALLRWRNPKFGNVPPLKFIPLAEETGLITSIGA 376 Query: 554 QVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 V++ + +A G R +VN+ P L +AG I R ++Y + + +EIT Sbjct: 377 WVIDHVCAQIAQWRQKGWAGFRVAVNISPKQFLDPGLAGLIGRTLEKYKLPASVLEIEIT 436 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + + + L + G I++DDFGTGY++ LK+ DI+KID FV+++ Sbjct: 437 EGA-MEDKGHILKVLSSLKEMGLTISVDDFGTGYSSLNYLKKFPVDILKIDQSFVRELEN 495 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + DA I ++I LA L VVAE VE Q Q L Q QGY RP P + Sbjct: 496 SQKDAAITKTIIHLAHQLGLEVVAEGVEEQGQVEFLQSARCQKAQGYFFSRPVPAEE 552 >UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NWP7_AZOSE Length = 728 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 110/554 (19%), Positives = 207/554 (37%), Gaps = 29/554 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF---IIFTLG 254 + + + ++ + + + ++L I GY Sbjct: 143 ERKRTDEALRLWASVFANSREGIAITDRNGIILDVNEAFVRITGYGREEVIGQNPRILQS 202 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRI 311 + + ++ + Y ++ + + + Sbjct: 203 GRHDSAFYAGMWESLYKASNWCGEIWNRRKDGEIYPQWLNISAVRDEESEVSHYISVFMD 262 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFM 363 + + +R L A DPLT L N L + + L +D + + Sbjct: 263 LSQIKSNEKRLELLAYFDPLTGLANRTLLADHMRMAIARSRRESTLFALGYLDLDGFKPV 322 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + +G + ++ I + + +++ ++ + +L G E ++++ G H L + Sbjct: 323 NDQFGHEVGDQFLQEIAKRIKSVVRGDDTVARLGGDEFVILVQGLRKPEECHHTFERLLA 382 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 I N L F ++ LL Q+ + + Sbjct: 383 KLEEPIQLNGHHLTATGSIGVTLFPCDEADPDTLLRHADHAMYQAKEAGKNR-IHLYDTE 441 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 + Q L+ I AL + + LL+ QP + G + ++ D G++ P Sbjct: 442 FDVEVRVQRELVERIEHALSEREFLLFYQPKVDLRRGRVIGVEALIRWQDPDRGLLPPSA 501 Query: 538 FLPLIAQFNLSAR-FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 FLP I Q +L ++ D VL + L SVN+ L+L + + +L Sbjct: 502 FLPQI-QNHLVSQKIDQWVLSEAVAQLMLWHAIGLDLSISVNVSGLSLQTHDFMNTLAKL 560 Query: 597 FKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + I+ + +E+ E A + E I + G R A+DDFGTGYA+ LK L Sbjct: 561 LAAHPEINRSRLEIEVLETVALDDIEHISGIISRRQAEGIRFALDDFGTGYASLRYLKHL 620 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 AD++KID FV+D++ + D +IV + L++A VVAE VET + L +LG + Sbjct: 621 PADVLKIDQSFVRDMLNDEEDRVIVEGVIGLSRAFKREVVAEGVETLEHYLCLMELGCDF 680 Query: 716 LQGYLIGRPQPLAD 729 QG+ I RP P ++ Sbjct: 681 AQGFGIARPMPASE 694 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 10/138 (7%), Positives = 27/138 (19%), Gaps = 12/138 (8%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFIIFT 252 + E+ + + +L+ + I GY ++ Sbjct: 15 KTIQTRRIEMQADEEMYRLIVNEISDGILVLDADFVARFANPAMLRILGYSPDELDGVWA 74 Query: 253 ----LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL--- 305 + F T NY + + + Sbjct: 75 GDLVWSEAEDLGRFAEETEKRRRGESGNYELRWRRKDGSARWSRISATARFDPDGQFDGS 134 Query: 306 LYMVRIYHRSEWLNRRWH 323 L + + + + Sbjct: 135 LIVFQDITERKRTDEALR 152 >UniRef50_Q21WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WZ5_RHOFD Length = 1353 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 115/654 (17%), Positives = 215/654 (32%), Gaps = 27/654 (4%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM---YLVGSFFDFPLKISTFF 157 AIL + + ++ LV + + V + + + Sbjct: 670 AAILVHRELRIIYLNPAAIAMFGARTAQELVGKALLDLIHPDSHQVATARVRHITNTGHA 729 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 + + + + Y I + + Sbjct: 730 APLIDEKYLRLDGTPIDVEVQSTSIIYEGLAAIRTAFRDISERKLAHDKLQLAANVFSHA 789 Query: 218 SWLAALSVL-LLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLC 273 A++ ++ I GY + + + + + Sbjct: 790 REGIAITDARATIIDVNEAFCRITGYSRDEVLGQNPRVLGSGRQDKAFYAAMWHDLGEQG 849 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + Y ++ + + + + A D Sbjct: 850 HWYGEIWNRRKNGELYPEMLTISAVRTDQGQVQNYVALFSDISAIKAHQHELEHIAHFDA 909 Query: 331 LTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L +Q + L +D + ++ +G + ++ Sbjct: 910 LTNLPNRVLLADRLQQAMAQAQRRGQMLALAYLDLDGFKAINDRHGHEAGDLLLMTVATR 969 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGA 439 + ++E + L ++ G E + VL M++ L + + + L + Sbjct: 970 MKQTLREGDTLARIGGDEFVAVLLDLSDSKASAPMLSRLLAAAAEPVRLGDLALQVSASL 1029 Query: 440 AWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + ++ LL Q Q+ + L IR A Sbjct: 1030 GVTFYPQVDEMEADQLLRQADQAMYQAKLAGKNR-YHFFDAAQDRSARGHHESLERIRQA 1088 Query: 499 LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 LD+ + +LY QP N G + ++ + G++ P FLP+I L+ V Sbjct: 1089 LDRREFVLYYQPKVNMRTGAVIGAEALIRWQHPEKGLLAPALFLPVIEDHPLAVDIGEWV 1148 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK-RYHISPQAVILEITEE 614 + + L D SVN+ L Q + R+ L + + P + +E+ E Sbjct: 1149 IATALIQNELWQADGLDMPISVNVGARQLQQADFVPRLRELLAAQPGVKPFQLEIEVLET 1208 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 A + +IE+ + G A+DDFGTGY++ LKRLQ D++KID FV+D++ + Sbjct: 1209 SALEDWVGVSQSIEECREMGVLFALDDFGTGYSSLTYLKRLQVDLLKIDQSFVRDMLDDP 1268 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D I++ + LA A +V+AE VET LL +LG QG+ I RP P Sbjct: 1269 DDMAILQGVIGLAGAFRRNVIAEGVETIAHGTLLLQLGCDLGQGFGIARPMPAD 1322 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 30/289 (10%), Positives = 75/289 (25%), Gaps = 16/289 (5%) Query: 48 PLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT--------AVMLGSQTFVVLC 99 PL ++L L + +LC + + HL A + G + Sbjct: 503 PLPLILEALVRGVEQLNPTMLCSILLLSGDGQHLGQGVAPSLPDFYNAAIDGIEIGAGAG 562 Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 +C + + + WQR L +G S ++ S +++ Sbjct: 563 SCGTSAFTAERVIVSDIATHVYWQRYKELAARADLGACWSQPILSSLGQVLGTFASYHHT 622 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 + ++ + ++ +R I S L Sbjct: 623 THTPTSAE--IASVERFARIAAIVIEGQAAAKKMRDSEERFRTLIEESPAAILVHRELRI 680 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 + + + + + L+ + N A + ++ Sbjct: 681 IYLNPAAIAMFGARTAQELVGKALLDLIHPDSHQVATARVRHITNTGHAAPLI-----DE 735 Query: 280 NFLQGVETEYSLAF-ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 +L+ T + +++ + R + + + L A Sbjct: 736 KYLRLDGTPIDVEVQSTSIIYEGLAAIRTAFRDISERKLAHDKLQLAAN 784 >UniRef50_A1SWA5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Alteromonadales RepID=A1SWA5_PSYIN Length = 724 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 104/493 (21%), Positives = 188/493 (38%), Gaps = 32/493 (6%) Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFI--LAVLISFSVCLLYMVRIYHRSEWLNRR 321 L A++ + + + + +V L + + + R+ Sbjct: 210 ALDEAINNGIGYDLELQTYTTKGRKIDVRTTCIVTQEDGVAVRLTGIFQDISEQKANQRK 269 Query: 322 WHLQ--------------ALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDN 359 A DPLT LPN L + + + +D Sbjct: 270 LEKSNLDLANANSALKLSAHYDPLTGLPNRILLADRIQQAVAKSLRNDKYVAVAFIDLDG 329 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ +G + ++ + + L +++E + L + G E + V+ +V Sbjct: 330 FKAVNDSHGHTIGDELLKKVAKRLKHVLREGDTLSRFGGDEFVAVIDNLSDPRESDLIVL 389 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + S + L + + + + LL + + Sbjct: 390 RMLESVSSTLVVEKKLLKISASIGVTFYPLDSAGPEQLLRHADQAMYMAKQQGKNRSY-V 448 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIM 533 + L I AL + LY QP + G + ++ D G++ Sbjct: 449 FDIEQDVAIKHHNEALKRIAQALKNNEFALYYQPKTDLRSNRVVGVEALIRWNHPDRGVL 508 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 P FLP + L V+++ L+ SVN+ PL L + Sbjct: 509 APAMFLPAVEHDILDIEIGKWVIKTALQQSQNWLSSGTDIPISVNISPLHLQHAEFVSEL 568 Query: 594 IRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 R+ +Y +I+ ++ EI E A + E +++ ++ G R +IDDFGTGY++ L Sbjct: 569 KRMLDQYPNINAGSLEFEILESSALKDIELVSKVMKECNQLGVRFSIDDFGTGYSSLTYL 628 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KRL A+ +KID FV+D++ +T D I++ I +LAK +L V+AE VET Q LL LG Sbjct: 629 KRLPAETLKIDQSFVRDMLIDTDDKAIIQGIIELAKVFNLKVIAEGVETPQHGELLLSLG 688 Query: 713 VQYLQGYLIGRPQ 725 ++QGY I +P Sbjct: 689 CYFVQGYGIAKPM 701 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 105/573 (18%), Positives = 196/573 (34%), Gaps = 35/573 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT------PYENDFIAGYL 243 + ++ + + + VL++ G + Sbjct: 372 LFLIVHDITAQQKARQQLRKEYEFFQMVIDNMVDPVLVMDTSRHIKKANRAAMFLADGKI 431 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAV---STLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + P + + + L E + A Sbjct: 432 DETAEVCCYEAFHRGSLPCDYQSQSCPMHTVLKTGKPASVIKHLDEKNKTYEIQAAPYFD 491 Query: 301 FSVCLLYM---VRIYHRS-------EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK 350 +L + R + R+ + D T LPN L Q + Sbjct: 492 DMGNILGVIESFRDITKRLEVENSLVEHERKIYDLTHYDSATGLPNRSVLIDRLNQAIYR 551 Query: 351 SFC--------CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + L +D + ++ G + ++ I + L L ++ L + GS+ Sbjct: 552 ALFNNSSLALLSLTLDRFKKINETMGHHVGDCLLQEIAQRLKKLTCDHSSLAKDSGSQFF 611 Query: 403 LVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L++ G + + + + + + N L + + E LL + Sbjct: 612 LLIEG-DPKEVVFDFADEVLTEVKQSFFANGQELIPSGSIGIAFYPDHAENATELLARAD 670 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---G 516 S A+ + + + + ++ AL+ L L+ QP + + Sbjct: 671 VAMRLSKDDMGGGAVMVYDPKYGEVAPQSLRMEADLKHALENNQLHLHYQPQFDLKNAGL 730 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RF 575 G + ++ G ++P +F+PL + L VL + + Sbjct: 731 VGVEALIRWNHPTEGPVSPGEFIPLAEETGLIHPLGRWVLREACRQAKFWQNNFARIVPV 790 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ L L + N + + I PQ + LEITE E SM + + GF Sbjct: 791 AVNVSSLQLKKNNFVHVLEECLNEFQIDPQLIELEITESAVMDRLEKSMELLNAIKGLGF 850 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +AIDDFGTGY++ LK+ +KID FV D+ T+ DA I+ +I +A + L + Sbjct: 851 NLAIDDFGTGYSSLSYLKKFPFSKLKIDRSFVMDLETDENDAAIITAIISMATSLGLKTI 910 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET +Q+ L G +QG+L+ RP Sbjct: 911 AEGVETVEQKHFLTDHGCDEVQGFLLSRPLSAD 943 >UniRef50_Q1N484 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Bermanella marisrubri RepID=Q1N484_9GAMM Length = 1215 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 101/538 (18%), Positives = 199/538 (36%), Gaps = 28/538 (5%) Query: 217 LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWA 268 + A+ +L+ ++ I GY + + ++ Sbjct: 647 VFEHASEGILITDIDGEIIDVNKAFTQITGYSKEDVVGKNPRILSSGKYEQETYEDIFST 706 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQ 325 + + +++ ++ + S + + + + Sbjct: 707 LENIGQWKGEIWNKDKKGNLFAVLESISTVYDDSGKPRNYIALFNDITNIKSHQEQLENL 766 Query: 326 ALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN L +Q + + +D + ++ YG + + Sbjct: 767 ANYDSLTQLPNRTLLTDRMQQAMALAKREGHLLVVIFIDLDGFKPVNDRYGHDVGDRLLI 826 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLD 434 + + + L++ + L +L G E + +L + + ++ + S + + L Sbjct: 827 AFSKRVSLLLRSTDTLGRLAGDEFVTLLPNVQQFENCEPLLERILSAVEKPFIIDEHQLK 886 Query: 435 MGYGAAWGRFDGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + ++ LL Q + + L Sbjct: 887 ISASMGVTVYPQAEDLDADQLLRQSDQAMYLAKQDGKNR-YHLFDATQHQLMRDHHENLV 945 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 I+ A+ + +L+ QP N E G + ++ D G++ P FLPL+ + Sbjct: 946 RIQEAIKNKEFILHYQPKVNLRSGEVIGVEALIRWQHRDKGLLPPGSFLPLLDNHPAMIQ 1005 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVIL 609 F V+ L ++ S+N+ P+ L + + + ++P + L Sbjct: 1006 FGKWVMHEALNQISVWQKQNLNLNVSINIDPMHLQSPDFISDLESALHNFPDVNPSFLEL 1065 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EI E A + I + H G ++DDFGTGY++ LKRL ++KID FV+D Sbjct: 1066 EIVETAAIEDINVVSDTINRCHDLGVHFSLDDFGTGYSSLTYLKRLPIHVLKIDQSFVRD 1125 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 I+++ D IV+ + LAK+ + + +AE VETQ+ LL +LG + QGY I RP Sbjct: 1126 ILSDPDDLAIVQGVLGLAKSFNRTAIAEGVETQKHGELLLQLGCELAQGYGISRPIEA 1183 >UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8L0_MAGSM Length = 714 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 101/613 (16%), Positives = 210/613 (34%), Gaps = 30/613 (4%) Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 P +A F ++ + I R+ + L + Sbjct: 89 TLVHPYDAPNKPVSVEAYFLLMTHGDDAGQLWIAFHSMEETRRLQERLENTEALLAQSKD 148 Query: 206 PSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF-----IIFTLGV 255 + TL VLL + I+GY + Sbjct: 149 QLTYYARLVTTLYDNTQEGVLLLDDQGTVQAVNNAYTIISGYHWEELLGKSVCLCHGGLC 208 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIY 312 + + + Y + ++ + + +VR Sbjct: 209 EESNAELQTILSHTRCDGSWEVQWQNSRRNGEFYLEQIRVTMIEDLNGTPQSYVVVVRDL 268 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMS 364 + + + D LT LPN EQ + L +D ++ Sbjct: 269 SYQDSSIKGARTASHEDALTGLPNRSLFADRLEQVLTHAKRSGEKVAVILLGLDGFRKIN 328 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + + + ++ + + ++ E + + + ++ + Sbjct: 329 DSLGHQIGDQILTIMAQRFQTNLRGGDTVARMGSDEFGFIARDLISTQSILSVLGKIKRT 388 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 S I ++ L G + L+ ++ A + + Sbjct: 389 LSAPIKIADSELVFTAGIGISVTPDDSLETDTLIRYADAALGRAKAGGGN-IFTFFTQTM 447 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK----EGEGYDEILARLKYDGGIMTPDK 537 +K++ L +R A++Q +L L+ Q + + G++ ++ + +G I++P Sbjct: 448 EQNASKRLHLEGRLRKAIEQEELTLFYQAKISCEDSPKISGFEALVRWITPEGDIISPGD 507 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + L V++ + +A S NL P +Q + + + Sbjct: 508 FIPIAEETGLIIPLGSWVIDRTCRDIAHLQALGFPPVVVSANLSPRQFVQDGLLQVVQQA 567 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++ I P + LEITE + + + ++ L G IA+DDFGTGY++ LKR Sbjct: 568 LVQHGIDPCWLELEITESSVMGSVDQATELLKSLVALGVHIALDDFGTGYSSLAYLKRFP 627 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +K+D FV+ + + D I+++I LA+ L VVAE VE + Q+ + + G + Sbjct: 628 FHTLKVDRAFVQTVEKDRADQAILQAIVSLARNLELQVVAEGVENEGQRDFITQAGCHSI 687 Query: 717 QGYLIGRPQPLAD 729 QG+ +P PL++ Sbjct: 688 QGFYYSKPLPLSE 700 >UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0K3_9PROT Length = 1561 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 98/557 (17%), Positives = 203/557 (36%), Gaps = 29/557 (5%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF-- 248 +Q++ ++K A+ +++ ++ + + GY Sbjct: 989 SQVIIVTARRELDEQKKLTTKFFDAASEGLMITDSHQNIIKVNHAFVRMTGYDEADVIGK 1048 Query: 249 -IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC--- 304 + + ++ + T Y + L Sbjct: 1049 NPSLLSSGKHEDTFYSAMWQEINQHGWWQGELWNRRKDGTHYLEWLTIHTLRDEHGHLTN 1108 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLR 356 + + + RR D LT LPN +A + + Sbjct: 1109 YIAIFSDITLIKAAQRRLEYMVAHDELTSLPNRNELRGRMAQTFARAQRHGGTFALMFID 1168 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +DN + ++ + G ++ + L ++ + + ++ G E ++L +E ++ + Sbjct: 1169 LDNFKNVNDNLGHDYGDVLLQQVAERLGLCVRTEDTVARIGGDEFNVLLDDV-SETQIAN 1227 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + S+ + + + + E ++ L Q+ + Sbjct: 1228 TAQRILDHVSKPYLIKEQQVFVSASIGIAVYPKDAEDIETLTKNADSAMYQAKDKGKD-S 1286 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + + ++ + N + A+D +L L QP N E G + +L Sbjct: 1287 YQFFTSDLKEKINHRIEIGNALHKAIDANELKLVYQPEFNLQTGELIGAEALLRWHSSLF 1346 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR--FSVNLMPLTLLQKN 588 GI+ PD+F+P+ + +L V+E + L VN+ P L ++ Sbjct: 1347 GIVGPDEFIPIAEESDLILELGEWVIEQAARQLNLWRKADTPLPGTLFVNVAPRQLARQP 1406 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I R +++ + ++ +EITE +++E + ++ IAIDDFGTGY++ Sbjct: 1407 LLAIITRQLQKHRLPSGSLGIEITERTLVNSSEDISVKLHKIELEEIPIAIDDFGTGYSS 1466 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK +KI F+ I T+ D I +I ++ A L +AE +ET+ Q +L Sbjct: 1467 LSYLKSFPISFLKIPNQFIDGITTDESDKGIATAIHGVSVALKLQTIAEGIETEDQLIML 1526 Query: 709 HKLGVQYLQGYLIGRPQ 725 ++G Q QGYL+GRP Sbjct: 1527 REMGCQSGQGYLLGRPV 1543 >UniRef50_Q07MF6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07MF6_RHOP5 Length = 802 Score = 597 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 123/746 (16%), Positives = 240/746 (32%), Gaps = 33/746 (4%) Query: 6 NLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVV 65 + + F + S S + + LA + + ++ I R Sbjct: 54 AISSGFGTWATHFIAMLAYHP-STHASYHLGLTLLSLALAILIIGAGAAVALIGPSRWYA 112 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL 125 + G L + + M + + L + + + R Sbjct: 113 GI--GGAVIGLGIAAMHYCGILAMQAPLLLIWSQETVLASIVLAVAF--SIPGAIIGARR 168 Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF---GDADAIFTVVDLLSLFTAVLIYNML 182 LG + + + ++ F I+ A L+L A +L Sbjct: 169 DELGYMLLASLLFAASVLSLHFTAMSAITALPDPDQTAVGPALTAPSLALVIAGAAAAIL 228 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 L + F + R+ + + E L A L + I Sbjct: 229 GGCLIAALTDRRFRAVNARQKLLLDIAIENMPQALCMFDAEGNSTLFNSHYADLMGIPAD 288 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYS---LAFILAV 297 + ++ + K A+ S + ++ + ++ L Sbjct: 289 RLNGMNLLDQFELRKSHGKLAGDPRAIYESIMAQISAGRPIVKTDNLIVPGRVLRITEQP 348 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAGK 350 L + + R A D LT LPN + +E G Sbjct: 349 LPG--TGWVTTIEDVTEWRKTQERIAHLARHDALTDLPNRTTFREEIDRVLRYTRREVGA 406 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV-LSGPE 409 + + +D+ + ++ G + + + R L +++ + + +L G E ++ +S E Sbjct: 407 AVLYIDLDHFKEINDSLGHPIGDELLIEVARRLADCIRDGDLVARLGGDEFAVIQISHHE 466 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E + + S + +G + L+ + ++ Sbjct: 467 PESDAAALAMRIVSIISTPYELQGHHVSIGASVGIALAPTDASEPDELIKKADLALYRAK 526 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 A + E + + LL +R AL + + L QPIR+ + ++ +L Sbjct: 527 AEGRG-SYRFFELDMDASAQTRRLLTTELRLALARNEFALLYQPIRDVESDQIICFEALL 585 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 + G + P++FL L L VL++ A SVNL P Sbjct: 586 RWEHPERGEILPEQFLALAESSGLIVPIGDWVLQTACADAAQWHS---DVGVSVNLSPSQ 642 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + ++P + LE+TE + +M ++ L G +++D FG Sbjct: 643 FRHPRLVPSVAAALTASGLAPHRLELEVTETALLQQRKPAMAALKALRALGVGVSMDHFG 702 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 GYA+ L D IKIDG F+++I + + ++T L K + A VET Sbjct: 703 AGYASLSSLSSFPFDRIKIDGSFIQEIEQSGDAFAALTAVTGLGKRLGRTTAATGVETVH 762 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A+L G +QG LI P+ + Sbjct: 763 QLAMLRATGCAEIQGLLISPPRSAHE 788 >UniRef50_A9WJ06 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WJ06_CHLAA Length = 845 Score = 597 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 97/591 (16%), Positives = 197/591 (33%), Gaps = 61/591 (10%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 ++ ++ L R + + + C ++ Y + Sbjct: 251 QIALARRRVLELIARQYDLRTITRELLHLIGEQVPDLIYAA--CVVRSSNLFVSYSTSLP 308 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF--------------------LQGVET 287 + + L + + L+ Sbjct: 309 EEAIKHLDAWAGEVLASELRPQQRMLSLRVDPSRWPVVDYILQAYAVSETWMMALRTNRD 368 Query: 288 EYSLAFILA----VLISFSVCLLYMVRIYH----RSEWLNRRWHLQALTDPLTLLPNFRA 339 S + L + L+ + QA D LT LPN Sbjct: 369 VDSWLLVCRQQNNPLTAEEQLLIEQFEQLSLIALEQHATLHKLAYQAHHDALTGLPNRLL 428 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 E +Q + + +D + ++ G + + R ++ + Sbjct: 429 FEDRLQQAIEHARRANTMVAVLFIDLDRFKHVNDTLGHTTGDMLLIQVARRFEACIRATD 488 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E LLVLS + ++ H+V L + N + + + + Sbjct: 489 TIARHGGDEFLLVLSDITSPQQVTHVVRRLHEALDQPFFVNGHEIFVSASIGASLYPIDG 548 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L ++ H + + ++ + +++ + N +R A+++ +LLLY Sbjct: 549 TDVIALQRAADVAMYRAKQLLHN-SFQFFDAAITDVSIERLQIENLLRRAIERHELLLYY 607 Query: 509 QPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 QP + + G + +L + G+++P +F+P+ + L VL + + + Sbjct: 608 QPKVDRTGQLVGLEALLRWQHPELGMVSPARFIPIAEETGLIVPIGRWVLREVARQVTQW 667 Query: 567 PCDKK--------GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 D Q + A + + + + LE+TE Sbjct: 668 WRDGLKVVPVAVNVSVI-------QFTQADFAQTVADTVAQTALPFSWLELELTESMLMG 720 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL--D 676 + + +L + G +AIDDFGTGY++ L RL +++KID FV + + + Sbjct: 721 QIDDLRRQLGELRQLGVTLAIDDFGTGYSSLSYLHRLPINVLKIDRSFVARLDQDDAGVE 780 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++ +I L + +VAE VET Q+ +L G QGY I RP P Sbjct: 781 RSLITTIITLGHHLGVQIVAEGVETAGQRQILFDAGCDVFQGYHISRPLPA 831 >UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5T0_9GAMM Length = 1410 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 106/567 (18%), Positives = 206/567 (36%), Gaps = 29/567 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + I A+ + + + A +L+ I GY Sbjct: 715 VILYDISERKKAEERLKMSGRVFNQAHEG---ILITDAKGLLV---DVNPAFSEITGYSR 768 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--- 298 R F + ++ L+ ++ ++ L Sbjct: 769 EEVIGKNPSILQSDKHSRVFFQEMWTSLEEKGHWQGEIWNLKKNGQLFAELLTISTLVDE 828 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGK 350 ++ L + +S+ L A D LT LPN + Sbjct: 829 RGETLHYLGLFSDITQSKEQQHALELMAHYDMLTQLPNRTLFADRFHQAIAHSKRNHSLL 888 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ YG + + + + + +++++ +L G E +L+L+ + Sbjct: 889 AVVFLDLDGFKPVNDRYGHDVGDQLLIEVAQRIKASIRQDDTASRLGGDEFVLLLNDISS 948 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + ++N + + + + + + LL Q+ Sbjct: 949 VDHCERLINRIRHAIELPYQLDEDTISLSASLGITIYPLDDADADTLLRHADQAMYQAKL 1008 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + Q ++Q I+ AL L+L+ QP N + G + ++ Sbjct: 1009 AGRQR-HHIFDALHDQQISQQQNQYKAIQDALKADQLVLHYQPKVNMGTGQIIGVEALIR 1067 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G++ P +FLP I L V+E +++ + D S+N+ L Sbjct: 1068 WNHPEHGLVLPGRFLPAIQGTELEIHVGNWVIEHVMQQVEAWLRDGIEMEISINISSHHL 1127 Query: 585 LQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHK-FGFRIAIDDF 642 K ++ + R+ H+ + LEI E S+ I G RI++DDF Sbjct: 1128 QWKGFFEQLDHVLGRHPHVPANLLQLEILESSVLSDINKISSIINTCRNVLGIRISLDDF 1187 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L+ L D++KID FV+DI+ + D I+ + L +A V+AE VET Sbjct: 1188 GTGYSSLTHLRHLPVDVVKIDQSFVRDIIDDPNDYTIIDGVIGLTQAFHHQVIAEGVETI 1247 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +L +G + QGY+I +P P D Sbjct: 1248 EHGLMLMTMGCELAQGYVIAKPMPAKD 1274 Score = 43.1 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 12/165 (7%), Positives = 38/165 (23%), Gaps = 17/165 (10%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LL 230 + + + + + + R+ E R + + + +L + Sbjct: 567 LATLIKISSAVMVLFLLFAYWIYRLRKSGRALAQSETRLREVLNASPVPQGILNEVGQVT 626 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKL----RYPFLNLTWAVSTLCLLNY-------NQ 279 GY + + + W + LN Sbjct: 627 YLNQAFITTFGYTLADIPTVNDWWQKAFPEKTHRETIQAEWQLHIEDSLNRSDTLKPVES 686 Query: 280 NFLQGVETEYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRWH 323 + + + ++ + S + L ++ + R Sbjct: 687 DVVCKNGDKKTVICNATHVASATDKHTLVILYDISERKKAEERLK 731 >UniRef50_C6XK75 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XK75_HIRBI Length = 785 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 118/737 (16%), Positives = 232/737 (31%), Gaps = 47/737 (6%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNF 79 + + ++ F + ++ FL+ + L + F W V W Sbjct: 31 AFLGMAPVAAF-----GLTATGAFLSILHHNSSLGPIM-FSWAYSAGV-LAYVMIRSWQL 83 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 + + + A + G L + + L LV + + Sbjct: 84 SIQQPDKNFHTSQKFKKIGFWAAGIGSVWGL-----LIAVLIMHDQTNLALVGAVAVGML 138 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA--- 196 P+ F A F LS A L+ LF ++ Sbjct: 139 SMGSFVLAVLPVASLVFMLGILAGFGAGAALSGDVAFLVIVPLFLIFMVVMQRYAAWTFR 198 Query: 197 ----QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 Q L R ++ S + L + V Sbjct: 199 NFVLQRLDRNAVSESKEVISLLLHDFESQSSDWLWDTDENMLLGRVSQRFAEAVKRPAEV 258 Query: 253 LGVGKLRYPFL-----NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVC 304 L + F L ++ + + Sbjct: 259 LNSECFLHFFEEDSKEQLQELFLNQRSFRDFVVPIRIEGELRWWSISASPKRNCEGEFTG 318 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLR 356 + + ++ A D LT + N E Q + C+ Sbjct: 319 YRGVCSDVTQERTAEKKIAYMAHFDALTGVHNRANFSTELEKAVERMHTQGKPFALHCID 378 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL-- 414 +DN + ++ G ++ + L + + + + +L G E +++ G Sbjct: 379 LDNFKTVNDTMGHPAGDSLLKIVAHRLSMSISDGDIVGRLGGDEFMVLQMGCNDAEEAML 438 Query: 415 --QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + L + + L + + ET + ++ + Sbjct: 439 TSDMITDALL-EPVSLMGSVLPVSGSVGTSFAPRDGETSKEIMQHADLALYAAKQDGRGC 497 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 E + ++ L +R AL + +L ++ QP+ + +GY+ +L + + Sbjct: 498 N-RMFEPKMDLDAKRRTQLEIGLRRALQENELEMHYQPLMDVRSGTIKGYESLLRWRRGE 556 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 ++ P +F+ + L ++ + + AT P ++NL P + ++ Sbjct: 557 NDVLLPTEFIEIAEDTGLIVPLGEWIIRTAIAEAATWPE---NISVAINLSPTQMKNPSL 613 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +I + P V EITE +E ++ + L G +IA+DDFGTG+++ Sbjct: 614 ISTVISALANNAMDPARVEFEITESVLLEESEVNIKTLHVLRDLGVKIALDDFGTGFSSL 673 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+ D IKID FV ++ T I+R++ LA+ + AE +E Q LL Sbjct: 674 NYLRAFPFDKIKIDKCFVTEMETRDDCRAIIRAVMGLARDLGMKTTAEGIENQTHVDLLK 733 Query: 710 KLGVQYLQGYLIGRPQP 726 G Y+QG+L RP P Sbjct: 734 AEGCDYMQGFLFSRPIP 750 >UniRef50_C6WUZ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUZ4_METML Length = 834 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 88/579 (15%), Positives = 195/579 (33%), Gaps = 22/579 (3%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 V L + + ++ + ++ + R ++ Sbjct: 248 VQLDGQVIGTVGFARDISEKQHLVSEVTKQRNAYQSLVQNLPTTIIRYDLDGKRIFVNSR 307 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + + G L + + + + Sbjct: 308 CFETYNIEVPYELNKTPLEWWSPYIVNVTG--AEFMTQLMEVMQFNVQKTLEIHSMHEDK 365 Query: 287 TEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + + + R+ A D LT LPN Q Sbjct: 366 VAVH-QLRIVPEFDEVHQVCGALTIATDITEVAEYRRKIESMAFHDQLTGLPNRTLFSQQ 424 Query: 344 PE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + L +D + ++ G + + + R + + ++ + Sbjct: 425 LSVAIDQAKTNNSQFALIILDLDQFKSINDTMGHAIGDKLLIEVARRITNSLDQHCTCAR 484 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E ++++ + ++++ N+L ++ + + + F + E + Sbjct: 485 LGGDEFIILVESVPSREHVEYVSNVLLNQIMQVYVIDGSEYFISASIGIAYFPDDSEDMD 544 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL + + ++ ++ + +R A++ ++ L QPI Sbjct: 545 DLLKYADSAMYHAKKGGRNR-YHTYSPAITESIQHRLNVETELRRAIENDEIYLEYQPIV 603 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + + +G + + GI++P F+ + + + ++ K Sbjct: 604 DMTSNQVKGLESLCRWHSRKLGIVSPMVFIQIAEETGMIVELGQWIMREAFKAARLLNAQ 663 Query: 570 K-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 SVNL + ++ ++ L K +P + EITE + +S + + Sbjct: 664 LKHPVSVSVNLSARQFFEVDLIHQVRHLLKEQQCNPAWIKFEITESLLLESNQSVLNALN 723 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 + G ++++DDFGTG + L + +KID FVK+I +N DA++V++I L Sbjct: 724 AFNDLGIKVSLDDFGTGQSALAYLSKFPIHQVKIDYSFVKEITSNPNDALLVKAIIALTA 783 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + ++AE VET Q LL G +Y QGYL +P L Sbjct: 784 TLNKELIAEGVETSAQATLLQSYGCRYAQGYLYSKPISL 822 >UniRef50_Q12T53 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Shewanella RepID=Q12T53_SHEDO Length = 941 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 101/575 (17%), Positives = 200/575 (34%), Gaps = 41/575 (7%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 +I+ E R L + E +++ + + Sbjct: 350 SLREKLEIIVSERTVQLKNSENRYRGLVESLQDEYIFYQHDIQGEIQYVSPSITHILGHK 409 Query: 251 FTLGVGKLRYPFLN----------LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 G + + + + + + ++ + + + Sbjct: 410 ALNFRGSYNKYLTSNKNNLAIPELILRCIKGEHVPPFEIEIMDIKGAYHTFEVLERPMYN 469 Query: 301 FSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 + + + R+ + + D LT L N + Q Sbjct: 470 EQNECIGCEGIAHDITERKQHQRKLYRLSHFDKLTNLANRYLFTLSLGQAITSAKALNQT 529 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L + + ++ + G ++ L + + L + G + ++L Sbjct: 530 FALLFLDLTRFKIINDNLGHSAGDKLLQQAALRLTEQLNSQDILARFGGDKFCILLPE-S 588 Query: 410 TEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E + + + + ++ +G F N + LL Q + Sbjct: 589 DEKQAEAVALTLIKILAQPFEVYEQSFILGCRIGISLFPTNGHDPETLLKQADAALYVAK 648 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ---GD-LLL--YAQ-----PIRNKE 515 E + +++ L +R AL + + L Q P + Sbjct: 649 K--RPAGFAFCSEEQAVYNQRRLKLEQGLRLALSKSSFDESFELSAVYQSLNQLP--DAG 704 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-R 574 G++ ++ + + G ++P +F+P+ + L +L + + L R Sbjct: 705 LAGFEALIRWVHPELGPISPMEFIPIAEETGLIFELSRWMLTKVCRQLKEWHQLGFDFKR 764 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVNL L L+ N+A II L + P+ + +EITE + E S+ ++QL G Sbjct: 765 VSVNLSALDLININLAEEIINLIEEAGAEPRWLKIEITETALMAAPEQSISTLQQLVGNG 824 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +AIDDFGTGY++ LK L A +KID F+++I+T+ D +V+++ +A + V Sbjct: 825 IHVAIDDFGTGYSSLAYLKSLPATSLKIDQSFIRNIMTSIEDQAVVKAVISMAHSLGKKV 884 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VETQ+Q L QGYL +P D Sbjct: 885 TAEGVETQEQLDFLITRHCDLAQGYLFAKPLIAQD 919 >UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKT0_9GAMM Length = 812 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 112/571 (19%), Positives = 220/571 (38%), Gaps = 33/571 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYL 243 + + I R + E L +L ++L C +F + + Sbjct: 231 VETVQQLLIENRENHHALERSENSLKQLINRVPQLILAVNSEGIVLFCNRKFAEFYSCRI 290 Query: 244 VPV--FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL--QGVETEYSLAFILAVLI 299 V ++ V + +V +F+ + + A + Sbjct: 291 DEVAGLSLLQLHNVDHEVEELNQIRRSVEVNQTEEAVTDFIWSSQTGKKLHFSITAAPFV 350 Query: 300 SFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK-------- 350 FS L++ + + A D LT LPN L EQ Sbjct: 351 YFSEPATLFVATDISEQKMVQDHISYMANHDTLTGLPNRALLNDRLEQALAASRRSGDLN 410 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D+ + ++ G + ++ + L+ ++ + + +L G E +++L ++ Sbjct: 411 ALMFIDLDHFKNINDSLGHGVGDLLLKKVAEILINEVRSCDTVARLGGDEFVILLQAFQS 470 Query: 411 E-----GRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + ++ + + + S+ I L +G F +TL L+ Sbjct: 471 DVDQVTQDVERVCHKLLTILSQPIEVKQHQLRIGASIGVVLFPMADKTLDDLMRFADTAM 530 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYD 520 + + + +S KQ + + + A+++ ++ QP+ + E G++ Sbjct: 531 YHAKENGRN-GFAFYHQAMSLAVEKQQNMESELHQAIEEEQFCVHYQPLVSVGGEIIGFE 589 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSV 577 +L + G+M P +F+P + L +L + + SV Sbjct: 590 ALLRWQHPEKGLMPPAEFIPSLEVSGLIVPVSNWLLGHCSRQIVKWKETGFWQPDWYVSV 649 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ PL Q ++ + + + LEITE A N E ++ ++ + + G I Sbjct: 650 NISPLQFYQADMVPTMQQAISEGGAHLTDICLEITETVAIENIEFAVNRLKVIRELGMMI 709 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 A+DDFGTGY++ LK L DI+KID FV+++ + IV ++T++A+A L VVAE Sbjct: 710 ALDDFGTGYSSLSYLKDLPIDIVKIDRSFVQELGQKSKSQSIVEAVTNIARAYELKVVAE 769 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +E+ Q L H +G QG+ I RPQ Sbjct: 770 GIESHDQLMLAHNIGCDIFQGFFIERPQVAE 800 >UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CC56_ACAM1 Length = 787 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 100/443 (22%), Positives = 180/443 (40%), Gaps = 33/443 (7%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------------------KSFCCLRI 357 + +AL D LT LP+ + +++ + L + Sbjct: 327 HRTAEQLKQKALFDNLTGLPSRDYFYEQLQRKLQQVQRQQLEGYSRQAELCHFAILFLDV 386 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + +I + L ++ + L +L G E ++L G + + Sbjct: 387 DHFKLVNDSLGHSVGDQLLVAIAQQLKESLRPQDLLARLGGDEFAILLDGVVNHQQAHKI 446 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + ++ + N + + + LL ++ AH Sbjct: 447 VQRIQRSLAKPLKLNQQEVFTSVSIGITHSTSLYQHPEELLRDADTAMYRAKAHGRG-GY 505 Query: 475 DSREEMVSGQTTKQVLLLNTIR---TALDQGD--LLLYAQPIRNKE---GEGYDEILARL 526 +E + Q ++ L N++R A++QG LL QPI G++ +L Sbjct: 506 VVFDETMHKQVRSRLWLGNSLRYAVKAIEQGQNPFLLQYQPIFCLRQQRLIGFEALLRWH 565 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLL 585 G+++P+KF+P+ + L VL++ + LA + S+N+ L Sbjct: 566 HPQQGLISPEKFIPVAEETGLIIPLGQWVLKAACQQLAVWEQEFSVPLTMSINVSSQQFL 625 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q N + L + + ++ + LEITE + +EQL G +++DDFGTG Sbjct: 626 QPNFVQSVESLMQSHQLAGHHLKLEITETVLMESTHYVTDRLEQLQNLGISLSLDDFGTG 685 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L L + +KID FV I IV++I LA ++VVAE +ET +Q Sbjct: 686 YSSLNYLYNLPINTLKIDRSFVWGIGQGQD--QIVKTIIALAHGLEMNVVAEGIETIEQM 743 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 LH LG + QGY RP Sbjct: 744 QYLHTLGCELGQGYWFARPLQPE 766 >UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UAD7_METS4 Length = 1034 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 110/584 (18%), Positives = 208/584 (35%), Gaps = 24/584 (4%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 + DL + ++ + R +LG ++ Sbjct: 437 TALKAALEDLAAANARAGQAMAEVQAQNTALLERDRSLRTQNRLFDAALGNMSHGLLMAD 496 Query: 220 LAALSVL----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 A ++ L L G + V F R + + Sbjct: 497 AAGRLIVANRRLAELLGTAPETLAPGESMEVIFAEIGARCSLGRRALARMRALQRDIATR 556 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 F + +L+ + + + + R A DPLT LP Sbjct: 557 EGAGTFKISGQDGRTLSITQRPMADGGS--VAIYEDVTEQQQAEDRIRFLAQHDPLTRLP 614 Query: 336 NFRALEQAPEQEAGK------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 N + + + L +D + ++ G + + ++ L + E Sbjct: 615 NRVLFRERLDAMMRADAPDATALLYLDLDAFKNVNDTLGHPVGDALLAAVGARLGACVGE 674 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDG 446 + +L G E + E E Q + + ++ + +G Sbjct: 675 GGVVARLGGDEFAVAC--AEGEAAAQALATRIIAQLSAPYALAGRTVQVGASVGIAVSGP 732 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 LL ++ LA E+ ++ + +++ L + + A+ G L+L Sbjct: 733 EARDADTLLRHADMALYEAKGRGRGLA-CVFEKSIAARLHERLALQSDLAEAVPGGQLVL 791 Query: 507 YAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 QP+ + G++ ++ G ++P +F+P+ Q VL+ + Sbjct: 792 AYQPVFDLAGGRVSGFEALVRWNHPVRGFVSPAQFIPIAEQTGQIEAIGAFVLDRACRDA 851 Query: 564 ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 A P G R +VNL P+ L ++I RI ++P + LEITE ++E Sbjct: 852 AALP---PGIRVAVNLSPVQLRAEDIVERIATALAESGLAPARLELEITETALMEDSERM 908 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + +E++ G RI +DDFGTGY++ L+ IKID FV+++ T IV +I Sbjct: 909 VQLLERIRALGVRIVLDDFGTGYSSLSYLRTFPFHKIKIDQSFVREMTTRANSLAIVSAI 968 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 LA ++ AE +ET + K+G + QGY +G+P+P+ Sbjct: 969 VGLADELGMATTAEGIETADHLDFVRKVGCREAQGYFLGKPKPI 1012 >UniRef50_Q3A5U6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5U6_PELCD Length = 628 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 89/437 (20%), Positives = 174/437 (39%), Gaps = 25/437 (5%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + R H A D LT LPN ++ ++ + + +++ + ++ Sbjct: 165 RQIQGRLHRLAYFDNLTGLPNRTQFLESLNKTLAIAQRKQKQAALLFIDLNDFKRINDTL 224 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKL---------YQLPGSELLLVLSGPETEGRLQHMV 418 G M + + + L ++E++ L +L G E ++L E+E + + Sbjct: 225 GHSMGDKLLEIVAKRLAGCIRESDLLGSTCEGSKTARLGGDEFTVLLPEVESEQFVATVA 284 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + +R + + + F + + + L+ + Sbjct: 285 KRIFHCLTRPADLDKHQVMVTPSIGIALFPNDGKDAETLMKCADMAMYFAKNREP-ENYR 343 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 +E ++ + K++ + +R AL + +L L QP + G + +L + G Sbjct: 344 FYQESMNTEALKRLAIETQLRHALQRQELSLVYQPQFDLNTGAVSGLEALLRWDNQELGQ 403 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAG 591 + P +F+ + + + V+ + + T R SVN+ P + + Sbjct: 404 IPPKEFILIAEETGIIYDLGHWVMCTACNQVKTWHNMDIELPRISVNVSPKEFIHPDFLS 463 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + + P + +EITE + E + +E+L + G +IAIDDFG GY++ R Sbjct: 464 NVKTALDESGLEPGGLQIEITETLLMEHYEGTAKILEELSRMGVQIAIDDFGKGYSSLNR 523 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L L D +KID FV I + ++++I +A A +L V+AE VET+ Q L Sbjct: 524 LHTLTIDCLKIDRSFVNGISVGFKEQSVIKAIISMASAMNLKVIAEGVETENQFTFLKDK 583 Query: 712 GVQYLQGYLIGRPQPLA 728 Q QGY + P Sbjct: 584 HCQEAQGYRLSLPLTTE 600 >UniRef50_Q48MD9 Sensory box protein/response regulator n=5 Tax=Pseudomonas syringae group RepID=Q48MD9_PSE14 Length = 705 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 95/555 (17%), Positives = 206/555 (37%), Gaps = 26/555 (4%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + +R T+ + ++ L+ T +F + + L Sbjct: 139 LEDQLQQRTIDLERFRTVMDASEDAIFLINRNTMSLIEFNRRACQLLGYTAEELAHKTPA 198 Query: 260 YPFLNLTWAVSTL---------CLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMV 309 + + + + ++ +V Sbjct: 199 ELGETSMENLEVVYDQIIAGKGPSEPLETQIRDKSGRDVEVEIHRQAYRTGEDWVIVGIV 258 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLE 361 R R + ++R D LT LPN + + + + +D + Sbjct: 259 RDITRRKESDQRLLTMTHYDALTGLPNRDLFFTSLQMGVTQAAISRWKLAALTVNLDGFK 318 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ +G ++ + + R L + ++ L ++ G + L+L + + + ++ + Sbjct: 319 NINETWGHVLGDEVLLEVSRRLSECLNASDTLGRVDGDQFALILMLRDGQADTRQTLDRI 378 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + M + + E + L+ + Sbjct: 379 RNALRVPFQLEGQSIVMTASIGIALYPEDGEDSRELIKHAYTAMNSAKKIGPD-TYRFYT 437 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 ++ + ++ L +R A+ + + QP + G + +L + ++P Sbjct: 438 AQMNADVSARLDLEAALRDAVQKQAFEIVYQPKLNLTDNRVCGLEALLRWPRPGQSGISP 497 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRII 594 F+P++ L V++S+ +A G + +VN+ + ++ I Sbjct: 498 AVFVPVLESLGLIGEVGNWVVDSVCAQIARWQRSGLGSFQVAVNISGQQIYSSSLVADIR 557 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + +++ ++PQ + +E+TE N ++ + L G I+IDDFGTGY++ L+R Sbjct: 558 QALEKHKVAPQWLEVELTESSLMENTSHTIATLGALRANGVSISIDDFGTGYSSLAYLRR 617 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +KID F++++ +N DA I R+I +LA + L V+AE VET +Q A L + Sbjct: 618 FPIDKLKIDIAFIREVTSNPQDAAIARAIIELAHSLDLKVIAEGVETPEQLAFLRENHCD 677 Query: 715 YLQGYLIGRPQPLAD 729 +QGYLI +P PL + Sbjct: 678 QIQGYLISKPLPLGE 692 >UniRef50_B1ZLG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Alphaproteobacteria RepID=B1ZLG9_METPB Length = 700 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 101/535 (18%), Positives = 185/535 (34%), Gaps = 33/535 (6%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + E R + +L + ++ V + +L Sbjct: 154 LIDGEGRVVLANERMHE--ILAVPGCDPLVGAAIRAVLSEALSEDAALVFVADHLRPDLG 211 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 S + + + + + + + R+ A Sbjct: 212 LDSSAVSEIVHRERI-----------LSVTTRRLAAGGWVSTFVDVTERRQFERQIQHLA 260 Query: 327 LTDPLTLLPNFRALEQAP------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT L N L QA E + + +D + ++ +G ++ + Sbjct: 261 QHDLLTDLANRATLHQALTETLASETWESCAVLYIDLDRFKPINDTFGHAAGDQLLQEVA 320 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 R L ++ + + +L G E L+L P L + + + +G Sbjct: 321 RRLRRTVRAQDVIARLGGDEFALILR-PADPQHLAGTAQQILEALNQPYAVRRLPIRIGA 379 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 LL ++ + + L + Sbjct: 380 SIGIAAAPLTGRDPDLLLRNADLALYEAKKEGRNR-YSFYNPSMGDTAAARASLEADLNR 438 Query: 498 ALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL+Q + +L+ QPI G++ +L + DG ++P F+P + L Sbjct: 439 ALEQREFVLHYQPIVRARTGATIGFEALLRWRRPDGVAISPADFVPAAEEAGLMPEIGAW 498 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 +L + A P +VN+ L + R + P + +EITE Sbjct: 499 ILAEACREAAAWPA---HLTVAVNVSATQLRSALFIDAVERALAASGLPPHRLEVEITET 555 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 N E ++ +++L G IA+DDFGTGY++ + +KID FV+ + + Sbjct: 556 AVLQNRELALSLLQRLRAMGVMIALDDFGTGYSSLSFVHTFPLTRLKIDRSFVQGLGRDP 615 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL-HKLGVQYLQGYLIGRP-QPL 727 IVR+I L+++ L+V AE VET++Q LL + G+ QGYL+GRP P Sbjct: 616 QSTAIVRAIIGLSRSLRLAVTAEGVETEEQHRLLARERGLDL-QGYLLGRPDLPA 669 Score = 43.1 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 12/134 (8%), Positives = 28/134 (20%), Gaps = 7/134 (5%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 P A I++R + + L Y + I G+ F+ Sbjct: 5 RPDDADIMYRLLVQGVTDYAIYMLSTDGLVVNWNAGAQRANGYTAEEIIGHSFAGFYTRE 64 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---M 308 G L+ + + ++ + + + Sbjct: 65 DRAAGLPGRNLETARREGR----FEAEGWRLRKDGSRFWAHVVIDAIHDDEGRFIGFAKI 120 Query: 309 VRIYHRSEWLNRRW 322 R + Sbjct: 121 TRDNTEKRASAVKL 134 >UniRef50_A8FVX9 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVX9_SHESH Length = 817 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 94/437 (21%), Positives = 169/437 (38%), Gaps = 26/437 (5%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 N + A DPLT LPN + + + +DN + ++ G Sbjct: 366 KSNEKIRELAFNDPLTGLPNRFMFTKHLNLSLESAKCDRGQLAVMFIDLDNFKHINDSLG 425 Query: 369 LMMRVHCIRSICRTLLPLMQ---------ENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + I L ++ +++ + +L G E + L + + + Sbjct: 426 HQSGDQLLHEIGDRLHRNLRSKDFCEHFSDSDMVARLGGDEFTVFLGELPSINIAEKVAK 485 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + S+ I + + + N T Q L+ + Sbjct: 486 RILEIISQPILLSGKSYYISASIGIACYPQNGVTTQELIKNADIAMYHAKKKGKG-GYQH 544 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 + +S Q + ++ + A++ LY QPI + + ++ + G + Sbjct: 545 FSDNLSRQNDEFSVIEQKMHEAVENERFELYFQPIVDSNTHRIVSLEALIRWYDVEFGFI 604 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGR 592 PDKF+PL + L V+ + L + ++N+ + L A Sbjct: 605 PPDKFIPLAEKNGLITVIGDWVIREACRQLKIWQDSGIVDIQLAINVSAIQLNNPKFAQE 664 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + K I P + +E+TE + + +E L G R+A+DDFGTGY++ L Sbjct: 665 LYQTIKNSGIIPGTLYIELTETTIINGEQEIFVTLEWLRSKGIRVALDDFGTGYSSLSYL 724 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + L DI+KID F++DI + + +I+ ++ +A A VVAE VE + A L K G Sbjct: 725 RNLPIDILKIDQSFIRDI-NDKNNNVILSAVIVMAHALGFKVVAEGVEERGHLAFLVKEG 783 Query: 713 VQYLQGYLIGRPQPLAD 729 LQGY+ RPQ D Sbjct: 784 CDLLQGYMFSRPQTADD 800 >UniRef50_Q2BQB2 Sensory box protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQB2_9GAMM Length = 677 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 91/431 (21%), Positives = 175/431 (40%), Gaps = 16/431 (3%) Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMS 364 E A D LT L N A ++ + + + +D + ++ Sbjct: 229 SELEQQKNSLRQIAEHDSLTGLANREAFLKSLNEVIIHCSTNKRRAAVFFIDLDKFKQIN 288 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + +++++ L ++ G E +++ + L Sbjct: 289 DSMGHSAGDAVLIEMAHRFTSTLRKSDSLARIGGDEFTVIIDPLYESKDAAELAKKLIAS 348 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + L + + + T Q L+ Q+ ++ Sbjct: 349 LEEPYEYEDQTLYLNTSIGIAVYPEDGTTPQELMKNADSAMYQAKKAGGN-TFHFYNRLM 407 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKF 538 + T ++ L + +R+A+ Q L +Y QP + + G + + + + G++ P F Sbjct: 408 NQDTLAKIQLESELRSAIQQDQLTVYYQPQFDLKTRKLVGVEALARWIHPEKGLIPPCTF 467 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +PL + L + +L + +A + +VNL L +AG I + Sbjct: 468 IPLAEEKGLIHQVGSIILTKACQQMAQWNGEREAQIALAVNLSAKQLNTPELAGSISDIL 527 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 ++ Q + LEITE S+ E +++ +EQL G R+A+DDFGTGY++ LK+L Sbjct: 528 HTTGLNAQHLELEITESCVLSDPEDAIHKLEQLKALGIRLAMDDFGTGYSSLAYLKKLPL 587 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV + N DA I +++ L + +L+V+AE +E + Q +L + G Q Sbjct: 588 DKLKIDKSFVDGLEINPEDAAICQAVIALGHSLNLTVIAEGLEHEVQATILAEQGCDQAQ 647 Query: 718 GYLIGRPQPLA 728 GY +P Sbjct: 648 GYFFAKPISAE 658 >UniRef50_B1WWC9 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=B1WWC9_CYAA5 Length = 661 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 91/564 (16%), Positives = 192/564 (34%), Gaps = 30/564 (5%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + + + + W +L + + Sbjct: 82 EELRLNEQALQLNQERLHSILGSIDDVVWSIVPQTSQILYLNHATETVYGRPIADFLDNL 141 Query: 251 FTLGVGKLRYPFLNLTWAVSTL---CLLNYNQNFLQGVETEYSLAFILAVLISFSVC--- 304 + + L + + L + + + ++ Sbjct: 142 NLWQEIIYADDQQRVEESQQLLYKTGIQDIEYRILWPNDEIHWIRVRSRLIKDDQGNPIR 201 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCL 355 + + + + + AL D LT LPN L EQ + L Sbjct: 202 IDGLTTEITEYKQIKDQLLHDALHDNLTGLPNRTLLMDRIEQGLKRCQRDKNRRFALLFL 261 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + ++ + L +L G E +++L Sbjct: 262 DLDGFKLINDSLGHLTGDQLLIILSHRFSRCLRAEDTLSRLGGDEFVILLENLSNIDEAI 321 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ-----ETLQPLLGQLSWLAEQSCA 467 + + + I N + + + + LL ++ A Sbjct: 322 AIADRIHNILKEPILLQNEEIFISVSIGIVLGGEQSVYNNLDQVAELLRDADTAMYRAKA 381 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 + + + K++ + N ++ A+++ + ++Y QPI + +G++ ++ Sbjct: 382 KGPGTS-KVFKPSMHTHVMKRLQVANELQRAIERQEFIVYYQPIISLDSDRIDGFEALVR 440 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMP 581 + G++ P F+P+ + + D VL L SVNL Sbjct: 441 WQHQEKGLIAPTDFIPIAEETEAILKIDQWVLRHACTQLGLWQQQFPNLGSLTMSVNLSS 500 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L ++ + + + ++ +EITE +++S+ +EQ+ + + +DD Sbjct: 501 KHLAHPSLIEVLDEILAETGLGGSSLKVEITESFVMEQSKTSLDILEQIKQRKIELCLDD 560 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L +I+KID F+K +V I+++I DLA ++ VVAE VET Sbjct: 561 FGTGYSSLSYLDCFSFNILKIDRSFIKRLVAEQDRCEIIKAIVDLAITLNMQVVAEGVET 620 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQ 725 Q+ L L Y QGY P Sbjct: 621 NVQRKRLKALNCGYGQGYGFFPPL 644 >UniRef50_A9CI56 GGDEF family protein n=5 Tax=Rhizobiales RepID=A9CI56_AGRT5 Length = 694 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 113/658 (17%), Positives = 232/658 (35%), Gaps = 33/658 (5%) Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 + VV+C T LF G+ I + ++ + Sbjct: 17 TAAAVVVCMLGSFVTMRLFSKARLATGLQKVNWLFLAGVNGGAAIWTTHFVAMLGYVAAG 76 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM----IVSPHFAQILWRRDIAPS 207 + + + ++ + + I + I+ A + + A + Sbjct: 77 DV-GYDPYLTGLSLLIAITTTTAGFGISAYGGRSVLVEAGGTILGLGIAAMHYTGMAAYN 135 Query: 208 LGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 + +A+L + + + + Y F I+ + Sbjct: 136 VQGMIFWDQAYVIASLVLGSVLGAIAVNRIARPLNRFCQYSAVAFLILAIASMHYTGMAS 195 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRW 322 ++ + + N + G ++A L +L + ++ R+ Sbjct: 196 MSFAFDPRIIIPENLLPPAIMGGG---AIAVTLLLLALGLSTYVI---DAQSTQQAVARY 249 Query: 323 HLQALTDPLTLLPNFRALEQAPEQEAGK-------SFCCLRIDNLEFMSRHYGLMMRVHC 375 +L DPLT +PN A + + + + +D + ++ +G Sbjct: 250 RHLSLHDPLTGIPNRAAFIEHLNRRTRHISMGAHTALLSIDLDRFKEINDVHGHAAGDAV 309 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTG 432 +R+I +++ E L ++ G E + + T L + + WN Sbjct: 310 LRAIADRASSVLKAGEFLARMGGDEFVAMTHSYYTRADGAEFAQRLIEQISKPVEWNGQT 369 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 +G + L+ Q ++ + + ++ + + L Sbjct: 370 FSVGASVGISVRNTGSIDADTLMAQADVAMYRAKSA-TSDTICFYDKSMDEAARARNALA 428 Query: 493 NTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R+ L + LY Q + G++ +L + G+++P +F+P+ Q Sbjct: 429 IAMRSGLANNEFELYYQQQNDTKSGSIVGFEALLRWKHPERGMVSPVEFIPIAEQTGFIV 488 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL A +VN+ P L + ++ R+ ++P+ + L Sbjct: 489 ELGEWVLREACAQAARWKK---SLAIAVNVAPQQLADNDFPDKVERILAETGLAPERLEL 545 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE ++ ++ I +L G +IA+DD+GTGY++ L+ D IKID F+ Sbjct: 546 EITEGSIIADHRHALVTIRKLKSLGVKIAMDDYGTGYSSLSTLQSFPFDKIKIDRAFIDG 605 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + TN IVRS LA + ++ V+AE VET+ L + G +QG+ G+P PL Sbjct: 606 LSTNVQSEAIVRSTLILAHSLNIPVLAEGVETKAHIEFLRREGCLQVQGFFFGKPGPL 663 Score = 46.1 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 18/203 (8%), Positives = 42/203 (20%), Gaps = 1/203 (0%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLS-RFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + I+T F + + P S I + +S Sbjct: 50 LFLAGVNGGAAIWTTHFVAMLGYVAAGDVGYDPYLTGLSLLIAITTTTAGFGISAYGGRS 109 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 ++ + + A +L LG + Sbjct: 110 VLVEAGGTILGLGIAAMHYTGMAAYNVQGMIFWDQAYVIASLVLGSVLGAIAVNRIARPL 169 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + + I Y + F + ++ ++ +L+ Sbjct: 170 NRFCQYSAVAFLILAIASMHYTGMASMSFAFDPRIIIPENLLPPAIMGGGAIAVTLLLLA 229 Query: 181 MLFYYLTRMIVSPHFAQILWRRD 203 + S A +R Sbjct: 230 LGLSTYVIDAQSTQQAVARYRHL 252 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 107/568 (18%), Positives = 201/568 (35%), Gaps = 35/568 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-------LLLCTPYENDFIAGY 242 +++ R +K + +S+++ LL + Sbjct: 320 LIALFDDATERRSLSQELESTKKFLELIVDNIPVSLIVESAGDGRYLLANRSAEIILNRK 379 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLT--WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI- 299 + + A+ +L L VL Sbjct: 380 REDATGLTTADIFNPREARLIMARDEAAIKKRGVLTEEHPISTKDGLRLFLTRRATVLGD 439 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 L+ R A D LT LPN A QA Q Sbjct: 440 GGEPQYLIKTYEDVTDRRQTESRMAHMAYHDGLTDLPNRAAFLQALSQMIEACADTGEEF 499 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + + L+ ++ +G + + + R + + + + +L G E L++ G + Sbjct: 500 AVLNVDLKGLKDVNDVFGHAIGDKLLIEVARRVHTVAR-GGVVARLSGDEFGLIIDG-KQ 557 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + L + + + F N LL ++ A Sbjct: 558 PETGRALAEQLAAAIAVEFQIEGKSIRTALTTGISVFPHNGPDPASLLANAGAALFRAKA 617 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI------RN-KEGEGYD 520 ++ E + Q + +L + A+ G+L LY QP + E G++ Sbjct: 618 RSRG-SITFYEPEMDQQIRDRRVLHQELSVAIKNGELSLYFQPQASSGRTVDCSEIIGFE 676 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 + G + P F+PL + + +L + A+ P + +VNL Sbjct: 677 ALARWHHPVRGFVPPSDFIPLAEESGMIVEMGEWILREACREAASWPK---PLQVAVNLS 733 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P + ++ + + +SP + LEITE + + + + +L G R+++D Sbjct: 734 PAQFVHGDLVALVHSILLETGLSPGRLELEITEGVLIEDFDRGVALLRRLKALGVRVSMD 793 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFG+GY++ L+ D IKID FV ++ N A I+R++ L ++S+VAE VE Sbjct: 794 DFGSGYSSLSYLQAFPFDKIKIDRAFVMNLGRNPQSAAIIRAVIGLGHGMNMSIVAEGVE 853 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T +Q L + G +QGYL+G+P P+ Sbjct: 854 TPEQLGFLAEQGCDSVQGYLLGKPLPID 881 >UniRef50_A6SXB0 Signal transduction protein n=2 Tax=Oxalobacteraceae RepID=A6SXB0_JANMA Length = 898 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 83/477 (17%), Positives = 177/477 (37%), Gaps = 20/477 (4%) Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + + ++ ++ ++ + L +R + R A D Sbjct: 410 AMDTGFFEDDYQVPADSPVDAEWLKRKFVRSENGLAITLRDISEPKRHEREMSRLATEDG 469 Query: 331 LTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN A + + +D+ + ++ G + ++ + Sbjct: 470 LTALPNRHWFMSYLPKALENARANATMLAILFIDLDDFKNVNDTLGHSAGDQLLCTVAKR 529 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN----NTGLDM 435 L +++ ++K+ ++ G E ++L +E H+ + + + + + Sbjct: 530 LRSVLRPSDKVIRIGGDEFTVILEAIHSEEEAAHIAHAINQALREPFEISRDTTSQKNRI 589 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G F + + ++ L+ + + + ++ + Sbjct: 590 GGSIGISIFPRDGQDVETLVKNADIAMYAAKTGSKGQ-FRFYDHTLYEDIKMRLNTEQEL 648 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 + A+ + L+Y QP + G + ++ G++ P+ F+ L + L Sbjct: 649 QQAIKEDQFLIYYQPRVQTQTGKLLGIEALIRWQHPTRGLVLPNDFIGLAEESGLINPIG 708 Query: 553 LQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V++ + LA+ SVN+ P + + I ++ I + +E+ Sbjct: 709 ELVVDKVCAQLASWLKQGVEAVPVSVNVSPHQFNEGKVKKSIAASLAKHGIPASLLEIEL 768 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N + ++ G ++ +DDFGTGY++ L+RL DI+KID F + Sbjct: 769 TESAMMRNIGDIFDELTAINAMGIKVHVDDFGTGYSSLSLLQRLDMDILKIDQAFTSQLG 828 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +I +AKA + VVAE VET +Q +L L +QGY + P P Sbjct: 829 RGKDGEIFFTAIVSMAKALGMRVVAEGVETLEQLHILQTLSCDEVQGYYVAWPLPAD 885 >UniRef50_C0N5Y8 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5Y8_9GAMM Length = 1085 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 109/579 (18%), Positives = 209/579 (36%), Gaps = 24/579 (4%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS-VLLLLLCT 232 A+L + L ++ + + + + ++ + Sbjct: 357 VALLSTSFLQDTFDSELLLVVYDITVRKEAEEQLRFSSRVFNQAQEGIIITDTSGTITDV 416 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 I G+ F + ++ + Y Sbjct: 417 NPAFCEITGFSREEVLGKGPDILNSGKHSPEFFSKMWQSIIEHGYWQGEVWNRRKNGELY 476 Query: 290 SLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + ++ + S + + +++ + A D LT LPN Sbjct: 477 AELLTISAITDDDGQSRHFVGLFSDITQTKQQQETLEMMAHYDVLTKLPNRVLFADRFSQ 536 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 E + C L +DN + ++ YG + + + L +++ + + + G Sbjct: 537 AMAHSNRTETMLAICFLDLDNFKPVNDTYGHEVGDQLLIEVAVRLRKNVRDEDTISRFGG 596 Query: 399 SELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++ E++ + M+ + ++ + N+T +D+ + + L LL Sbjct: 597 DEFAILFRDIESQSECEFMLRRIHESLAQPYNVNDTRIDISASSGVTFYPQENADLDTLL 656 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q+ + Q ++ L IR L+Q L+ QP N Sbjct: 657 RHADQTMYQAKLAGRN-TYKLFNPAKNRQNIEKQQWLQQIRLGLEQDQFRLFYQPKVNMR 715 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 E G + ++ + G+++P FLPLI + V+ S ++ L + K Sbjct: 716 TGEVFGMEALIRWVHPKKGLLSPIHFLPLIEGSEIEIDVGNWVMRSAMQQLQVWHDEGKE 775 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLH 631 SVN+ L L + + + I + + LEI E A + + I+ Sbjct: 776 IEVSVNVASLHLQSAHFIDDVEAALATHADIDSRYLQLEIVETSALGDIGAISKVIKLCR 835 Query: 632 KF-GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G IA+DDFGTGY++ L+ L A IKID FV+D++ + D IV ++ LA+A Sbjct: 836 DLLGVSIALDDFGTGYSSLTHLRHLTASTIKIDQTFVRDMLDDPQDYTIVDGVSGLAEAF 895 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET + +L G + QGY I +P P + Sbjct: 896 NRQVIAEGVETTESGLMLLMSGCERAQGYGIAKPMPAEE 934 >UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n=2 Tax=Clostridium RepID=A0PXI0_CLONN Length = 591 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 92/472 (19%), Positives = 177/472 (37%), Gaps = 21/472 (4%) Query: 275 LNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + YSL+ + + + + + R + D L Sbjct: 106 WTGELEYRSKSGRMYSLSILGKSIISQRDLQTYYIVIFEDVTKLKESERDINYLKKYDIL 165 Query: 332 TLLPNFRALEQ-------APE-QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LP + E L +D+ +F++ G + +R + R L Sbjct: 166 TQLPQKELFVKNLKDEIIRLEGTGKLVGVVTLGLDDFKFINEAMGHLSGDRLLRDVTRRL 225 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 + + L ++ G E ++L+ E +++ +N + + N+ + + Sbjct: 226 K-TLDKKCFLARITGDEFGIILTECEDIKDIENRINHIQQLFCKAFVINDQEVFVTASIG 284 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + L+ + + + +S K++ ++ ++ A++ Sbjct: 285 ISIYPLDALNANELIMNATSAQNFVKKNGKND-YKIYSKDISKNAYKRIEMIALLKHAVE 343 Query: 501 QGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 +L+ QP + E G + ++ G++ PDKF+PL + L V+ Sbjct: 344 NNQFVLHYQPQVSLESGSVMGVEALIRWNHPKLGLVYPDKFIPLAEKTGLIIPMGEWVIR 403 Query: 558 SLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + SVNL L ++++ I+ K + P+ + +EITE Sbjct: 404 EACRQNKIWHDSGFEELVVSVNLSALQFEKEDLVDVIVDALKTSGLDPKFLEVEITEGIL 463 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N + ++ + L + G +IAIDDFGTGY++ LK D +KID F+ I + Sbjct: 464 MVNTDKAIQTLNDLKEIGVKIAIDDFGTGYSSLSYLKEFPIDRLKIDRSFIMGIPK-EDN 522 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I I +LAK+ L+VVAE ET L +QGY +P Sbjct: 523 GAIANIIIELAKSLHLNVVAEGTETLDHIKFLKVRKCDTIQGYYFSKPVSGE 574 >UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MI55_ALKOO Length = 737 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 94/425 (22%), Positives = 181/425 (42%), Gaps = 16/425 (3%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + H A D +T LPN L + +Q+ L +D + ++ G M Sbjct: 304 EKVHNLAYYDGITKLPNRVYLLKILGECIDSANDQKNRFGILNLDLDRFKHINDTLGHHM 363 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 ++ + + +++ N + G E ++++ + + L + N + + Sbjct: 364 GDEILKLVGERIGRILKPNNFFARFGGDEFIILVKHIQEDKELIDLANQIIKEMDQPFML 423 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N+ L + + ETL L+ + ++ +S + + Sbjct: 424 NSHRLFLTTSIGISIYPEGGETLNDLMKNSDIAMYAAKGKGGNQYY-IYDKSLSEKQMEA 482 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 ++L+N +R A+D +L L+ QPI N G + +L + G++ P+ F+PL + Sbjct: 483 LILINQLRNAVDHDELTLFYQPIMNTSTGNIVGVEALLRWYQPGHGMIGPNTFIPLAEET 542 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 +L V ++ + R +N+ +K I++ K + P Sbjct: 543 DLIISIGKWVFRNVCAQIKDWIHRGYDVKRVYINVSAKQFQEKGFLESILQALKEAELPP 602 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + +EITE + + ++ I++L G I+IDDFGTGY+N+ LK + D IKID Sbjct: 603 KYIGIEITETVIIQDIDHTIELIKKLKDIGISISIDDFGTGYSNFNYLKEMGVDEIKIDR 662 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F+ + N+ I ++I LA ++V AE VET++Q L + +QG+ RP Sbjct: 663 SFIAETTKNSKKRAITKTIILLAHQLDIAVTAEGVETKEQLEFLRESSCSKIQGFYYSRP 722 Query: 725 QPLAD 729 P + Sbjct: 723 VPPEE 727 >UniRef50_C5V1X8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1X8_9PROT Length = 714 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 101/446 (22%), Positives = 186/446 (41%), Gaps = 42/446 (9%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSR 365 ++ + A D LT LPN L +Q + + +D + ++ Sbjct: 272 ELRQAAKKINELAFFDQLTGLPNRVLLLDRLKQAMSASTQNRCHIALLLIDLDKFKTINE 331 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNI 420 G M ++ + L ++ + + +L G E +++ + T +++ Sbjct: 332 TLGHDMGDQLLKQVAERLSHCVRSGDTVARLGGDEFVVMSANLNTHEALAATQAENIGEK 391 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + R H++ F G Q ++ LL Q +S AL Sbjct: 392 ILAALNRTYHFDAIPHHSTPSIGVTLFCGEQTDVEILLKQAELAMYKSKEAGRN-ALHFF 450 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKEGEGYDEILARLKYDGGIMTPD 536 ++ + + T+ + N +R A+ Q +L+ QP +++ G + ++ K DG +++P Sbjct: 451 DQDMETKVTRYANMENDLRVAVQQQQFILHYQPQIADQQLTGVEALVRWQKPDGSMVSPA 510 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRII 594 F+P+ + L L VLE+ + LA ++ +VN+ Q + +++ Sbjct: 511 DFIPMAEETGLILPLGLWVLETACRQLAIWANQPERAHLTIAVNVSAHQFRQADFVDQVL 570 Query: 595 RLFKRYHISPQAVILEITEEQAFS-----------NAESSMYNIEQLHKFGFRIAIDDFG 643 + K +P N E + + L G ++DDFG Sbjct: 571 EVIKNSGANPHR-----------LKLELTESLLLTNVEEIIEKMIALKLTGVSFSLDDFG 619 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL D +KID FV+D++ + DA I R+I LA++ SL V+AE VET+ Sbjct: 620 TGYSSLSYLKRLPLDQLKIDQSFVRDVLIDPNDAAIARTIITLAQSLSLGVIAEGVETEA 679 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+A L QGYL +P + D Sbjct: 680 QRAFLASADCHAYQGYLFSKPLRIDD 705 >UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH Length = 816 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 92/616 (14%), Positives = 206/616 (33%), Gaps = 48/616 (7%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLS-LFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + P+ ++ + D + VD+ + A + S + Sbjct: 201 FRAAVNGTAPIHLTLGYLGPDQLRGWVDIHADHVAATDHQGRRITGVIHDATSRCNQEDK 260 Query: 200 WRRDIAPSLGKEKRAFTLS---WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 R+ + + + +++ + E + + + + Sbjct: 261 LRQANVVFETAAEGIIIMDGQRQIISVNPAFSSMTQYEEAEIVGKSPEAIMHPRRHTDID 320 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYH 313 + L + A + L+ ++ ++ + + + Sbjct: 321 YPWHTLLPGSHA------WHGEMMCLRKDGGYFTSWQHVSAVHDSRHNTTNYVIAFSDIS 374 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSR 365 + + A DPLT L N L + A + + +D + ++ Sbjct: 375 AIRKAEAQLNHLAYHDPLTELGNRNLLQERLELELKTAQLNHQQLALLFIDLDGFKLIND 434 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G ++ + + +++ N+ +L G E L+++ E L+ + L + Sbjct: 435 TLGHRAGDELLKLLAERIRRVLRHNDVAARLGGDEFLVLIPFFERPQELERLAEQLLACL 494 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + + + + + L+ ++ ++ Sbjct: 495 REPVELGHERVAVSASIGIALYPEHATSPDTLVSAADSAMYEAKNRGRN-GYLFYTPDMT 553 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFL 539 QT +++ + + A++Q L + QP + + G + +L G++ P +F+ Sbjct: 554 EQTRERMSMEQGLFKAIEQHQLCVLYQPMTELASNRMSGLEALLRWQHPSEGMIGPTRFI 613 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L + V+ + + R S+N+ + R+ + Sbjct: 614 PVAEECGLIEQIGEWVMRTACQQGQAWLAAGLAVPRLSINVSVREMRSAGYVERVAAILA 673 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL--- 655 P+ + +E+TE + S+ +L G +IAIDDFGTG Sbjct: 674 ETGFPPEKLEIEVTES-IIQRVDQSLQLFRRLKALGVQIAIDDFGTG---------FSSL 723 Query: 656 ------QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 D IKID FV+ + + + R+I +LA + + V AE +ETQ Q+ L Sbjct: 724 SLLKSLPIDRIKIDRTFVQALPDDKHSRELCRTIINLADSLGMMVTAEGIETQAQRQFLQ 783 Query: 710 KLGVQYLQGYLIGRPQ 725 L Q QGYL P Sbjct: 784 SLHCQEGQGYLFSHPL 799 >UniRef50_A4TYP2 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYP2_9PROT Length = 953 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 106/694 (15%), Positives = 204/694 (29%), Gaps = 39/694 (5%) Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + W S+L IL Q + + Sbjct: 255 WTIENWPDGKSYLTGYARAKGTMGSPGLGWIILIHQPVDEAFADAVLFRNQVMIVGFLVA 314 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + L + PL D V + + ++L L R++ Sbjct: 315 VGAAAWLWLALGRTI--RPLTRIAEIADRIQKGEAVAQIPIIDGRSEAHILSVSLNRLVS 372 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV----LLLLLCTPYENDFIAGYLVPVF 247 + +R L L+ D + F Sbjct: 373 TLADRNADLAAANTALEDDIRRREALEQELRLAATYYEASAEGIVVTVADGTIASVNDAF 432 Query: 248 FIIFTLGVGKLRYPFLNLTWAV--------------STLCLLNYNQNFLQGVETEYSLAF 293 I ++ +L + + + Sbjct: 433 CRITGYQRHEVLGKTTSLLKSGVQDDEFYADMWQLLRDTGHWEGEIWNRRKDGRTFPEYL 492 Query: 294 ILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQA 343 + + + + + + D LT LP + +A Sbjct: 493 TINAVRRDGEITHYVAQFSDLSDRKAAEEKIVQLSTHDTLTGLPKRIVAMERLSGLISEA 552 Query: 344 PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + +D L ++ G + + L L+Q + L +L G E L+ Sbjct: 553 RRDGRLVALIYVNLDGLNRVNDALGHHGGDRVLVETAQRLRQLLQPADALARLGGDEFLI 612 Query: 404 VLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + S + + + S+ + + + + E L+ Sbjct: 613 ISSRFMVMAEAEALARQILDACSQAFFVDEKDTYLTARIGIAFYPRDGEDPLELIRNSHA 672 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL-DQGDLLLYAQPIRN---KEG 516 + ++ + + + L +R A+ ++ QP+ N Sbjct: 673 ASVRAKEQGGN-IYRIFTRDMDDEAVARHALDAELRQAMNSDDQFKVFYQPLVNAQSGRI 731 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRF 575 G + ++ G++ PD+F+PL L ++L + A Sbjct: 732 IGAEALVRWFNPTRGLVPPDRFIPLAESNGLIVPMGRKILATACADGARFRKHIGSDFFM 791 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ + + + P + +EITE N + + L + Sbjct: 792 AVNVAAAQCADPGFLETVSKCLSDAKLPPHCLEVEITERTVVGNNPTITAFMTALREAES 851 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +++IDDFGTGY+ L++ +KID FV I D +V +I +A A L V+ Sbjct: 852 KLSIDDFGTGYSALSYLRQYPFTTLKIDRSFVMGIGDVEQDDALVLAIIHMAHALGLEVI 911 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VET +QQ L G + LQGYL+G+P P + Sbjct: 912 AEGVETTEQQEFLRDAGCETLQGYLLGKPMPADE 945 >UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1N8_SHEAM Length = 817 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 123/665 (18%), Positives = 221/665 (33%), Gaps = 49/665 (7%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 L + L + ++ W G + V + S Sbjct: 149 LIYLEYDLSGAYSRAISELQQRFLQIWGG---GALLILMFLTVFHYVGVRPLRSLLRLAR 205 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + + + + Y ++ +R + E+R Sbjct: 206 LKQAEPLAQTVPMASSEVAKLQQYMY--------QTELKLKRTLKQLRDSEQRWLFAVEG 257 Query: 221 AALSV-----LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV------ 269 + + L + GY ++ G+L Sbjct: 258 SQTGIWDWQISSGELFLSDRWKEMLGYGPTELKNEYSSWEGRLHPDDKARVLERLQSYLK 317 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVL----ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + V+ ++ R + Q Sbjct: 318 GEADVYESRHRLKHRQGHYIWVLDRGMVVEWQEDGRPARVIGSQRDVSEDMRNQQAIAHQ 377 Query: 326 ALTDPLTLLPNFRALEQAP---EQEAGK------SFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT L N RA+ A +Q + + +DN + ++ G + Sbjct: 378 ANHDSLTNLANRRAVMDALFEFQQAGPGSMLRLGALLLIDLDNFKLVNDALGHHHGDRLL 437 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGP-ETEGRLQHMVNIL-------NSRQIHW 428 L N + +L G E +++ + H L +R Sbjct: 438 IQAAARLSGFFSGNALVARLGGDEFAIMVLDLATDTEQAAHQAMQLGAELKQQIARSFQL 497 Query: 429 NNTGLDMGYGAAWGRFDGNQ-ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 ++ +++ FD + LL + + + + T+ Sbjct: 498 SDQQINVTASVGVCLFDNHHPVEPAQLLKHADMAMYAAKDGGRNGC-ALYSDELEDKATE 556 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L N +R A+++ L L QPI + E + + + G ++P +F+P+ Sbjct: 557 NLWLQNELRHAIEREQLSLVFQPIFNHDGELVCCEALCRWHHPERGPISPAQFIPVAEDS 616 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL + + L +VN+ Q + R++ L K + +SP Sbjct: 617 GLIIGIGQWVLLEVCRTLKAMSEKGTPMPAVAVNISARHFNQIDFVERLLALLKAHQVSP 676 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE SN + +++L GF IAIDDFGTGY++ L+ L +K+D Sbjct: 677 AQIELELTEYALLSNLNAISERMQRLRSAGFSIAIDDFGTGYSSLSYLQSLPLSRLKLDA 736 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV I T + IVR+I D+A + L VVAE VET+ QQA L L + QGYL+G+P Sbjct: 737 AFVGRIGTEAGN-AIVRAIVDMAHSLMLKVVAEGVETEAQQAYLSSLECDFFQGYLLGKP 795 Query: 725 QPLAD 729 P ++ Sbjct: 796 MPASE 800 >UniRef50_Q2N9U4 Sensory box/GGDEF family protein n=5 Tax=Sphingomonadales RepID=Q2N9U4_ERYLH Length = 740 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 95/544 (17%), Positives = 194/544 (35%), Gaps = 32/544 (5%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL---GVGKLRYPFL 263 + E + LS A ++ I L +F + G + P Sbjct: 48 ATDSESKLIYLSENA------AAQFGCSADELIGKPLSELFILERGEEEKGEQSPQRPLP 101 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNR 320 L A +T+ L + + + + + + + + Sbjct: 102 FLLRARNTISDLPVRISIGESDDRKIWWSISGKPQLDGNGDLLGYRGSAKDITAVRQNQL 161 Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 A D LT L N + + + + L +D + ++ G Sbjct: 162 EVGRMAQYDSLTGLANRHRMTKRLTTTLTAYKAAKRSCALMMLDLDRFKQVNDTLGHPAG 221 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWN 429 ++ + + L ++ N ++ +L G E ++L E GRL + + S+ + Sbjct: 222 DELLKQVGQRLERIIGGNGEIGRLGGDEFQVILPDIEDRGRLGEVAARVIQMISQPYSID 281 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 +G + + L+G + + + Sbjct: 282 GARAIIGTSVGIAIAPYDGIDTEELVGAADLALYAAKGGGRGQ-YRFYSSELKDGARHRR 340 Query: 490 LLLNTIRTALDQGD-LLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + +R AL L ++ QP+ + + ++ ++ + G ++P F+P+ Sbjct: 341 EIEEDLRDALSMDQGLEMHYQPLVDAKTHRVKCFEALIRWNHPERGWISPGDFIPVAEDT 400 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 N VL + ++ P +VN+ + N+ + + K + P+ Sbjct: 401 NQIGDLGEWVLRRVCTDASSWPG---DISVAVNVSAVQFGDPNLPQIVCKALKDSGLDPR 457 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE + ++ L K G +A+DDFGTGY++ LK D IKID Sbjct: 458 RLELELTESVFIGDPNATHDMFVALKKLGVALALDDFGTGYSSLGYLKNAPFDKIKIDQS 517 Query: 666 FVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+ + ++ I+ +I LA A +++ VAE VE + L+ + G Y+QG++ + Sbjct: 518 FVRGSTENDNNNSAIITAIVSLAGALNMTTVAEGVEAMDELELVRERGATYIQGFIFSKA 577 Query: 725 QPLA 728 P Sbjct: 578 IPQD 581 >UniRef50_A7K1J3 Sensory box/GGDEF family protein ScrC (Involved in swarmer cell regulation) n=13 Tax=Vibrionaceae RepID=A7K1J3_VIBSE Length = 776 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 87/433 (20%), Positives = 168/433 (38%), Gaps = 17/433 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 R + + QA D LT LPN + + + +D+ + + Sbjct: 335 IERRKASEKELAFQAKYDTLTNLPNRSYGSERLALELIRASRSGSKVLVMFIDLDHFKQI 394 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + ++ + L + ++ + L ++ G E LLV+ + + + + S Sbjct: 395 NDSMGHFVGDEILKLSAQRLHQVARKTDLLARIGGDEFLLVIPDLPDNDTAKRVASSVLS 454 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 WNN + F + + + LL + A Sbjct: 455 AFNDPFVWNNHEFFLSSSVGMSVFPDDGDNAEQLLACADMAMYRVKQDGRD-AFCFYNHN 513 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 ++ + + L N +R A+ L LY QPI + + G + ++ G + P++ Sbjct: 514 MNQDLQRYLDLENRLRNAISSQLLELYYQPIIELSSGKIVGAEALMRWNDEKYGFVNPEE 573 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ-KNIAGRIIRL 596 F+ + + L + ++ + A SVN + + I + Sbjct: 574 FISIAEKNGLIHQIGEFAIQQACRQAAQWQS-LTPLFVSVNFSSVQFRYCDRLLAFIKKS 632 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + +E+TE F++ + + L G ++ IDDFGTGY+ L++ Sbjct: 633 LEESGLPSDKFDIEVTESLLFNHDSELLDMLNNLRALGTKLTIDDFGTGYSALSYLQKFP 692 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F++++ N D +V I +AKA +L +VAE +E Q+ L L ++ Sbjct: 693 FDRLKIDRSFMQNMFENDSDRELVNVIIAMAKALNLKIVAEGIEEQRHVDYLKGLNCEFG 752 Query: 717 QGYLIGRPQPLAD 729 QG+ RP P D Sbjct: 753 QGFHYSRPLPAKD 765 >UniRef50_A0L6C9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L6C9_MAGSM Length = 555 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 91/542 (16%), Positives = 187/542 (34%), Gaps = 33/542 (6%) Query: 217 LSWLAALSVLLLL--LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 L A +++ + + + P W + Sbjct: 10 LLHHLADGIIIHEQDMILYANEIARIMLGTEIHTDLTQSLFSLRIDPTCREAWLHNGANH 69 Query: 275 LNYNQNFLQGVETEYS-------LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + + + L+ +R + R QA Sbjct: 70 SHEADRVKLVDLKLLPEAKPFTHVEALTIPFQGNERLLVTTLRDISEKKRQEERIRHQAN 129 Query: 328 TDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN + + + +D ++++ G +R Sbjct: 130 YDALTGLPNRGLFLDRLKLELARAKRTDVRVAVMFIDLDRFKWVNDTLGHAAGDDLLREA 189 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMG 436 + LL ++++ + ++ G E ++L + + + + + + Sbjct: 190 SKRLLSCHRQSDTVARMGGDEFTVILPDMARGPHAERVAAQILEQLAAPFTLEGQEVTIS 249 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F + + L LL ++ + A + + ++ L + Sbjct: 250 GSVGVTIFPDDADNLDDLLKNADTAMYRAKSQGRN-AYRFYTPDMHAEAMARMALERELS 308 Query: 497 TALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 +A++ +L L QPI + G + +L G ++P+ F+P+ + L A+ Sbjct: 309 SAVEDQELALCYQPIVDLNTNRIAGAEALLRWNHPTLGAVSPEVFIPIAEEMGLIAQITE 368 Query: 554 QVLESLLKWLATHPCDK---KGPRFSVNLMP---LTLLQKNIAGRIIRLFKRYHISPQAV 607 + K SVNL L + +I + + P A+ Sbjct: 369 WAVREACTQACQWRSQYGTAKDFFISVNLTCTRCRELSTDD---KIPSILAETQLPPHAL 425 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 +LE+TE + +M + L + G R+ +DDFGTG ++ L+ L +KID FV Sbjct: 426 VLEVTETILGEDPPKAMAMLNHLKQIGVRLWLDDFGTGSSSLSVLRNLPVCGVKIDRTFV 485 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 D + + ++V +I ++ ++ + ++ E VET+ Q+ L GVQ QGY G+P Sbjct: 486 PDALNDKEAEVLVTTIINMGRSLNRILIGEGVETEAQRLYLEGKGVQLAQGYFFGKPCSA 545 Query: 728 AD 729 A+ Sbjct: 546 AE 547 >UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Shewanella RepID=B1KIP0_SHEWM Length = 796 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 174/438 (39%), Gaps = 17/438 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRI 357 + ++ + + + QA D LT L N Q + L + Sbjct: 344 VLLLEEVDKRKASENKLAYQATHDELTGLANRTHSMSRLAQSIESAQVNNTKVLVMFLDL 403 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 DN + ++ G ++ + LL ++ + + + G E L+++ + + + Sbjct: 404 DNFKQVNDTVGHHAGDELLKLTSKRLLNSVRNTDTVARFGGDEFLIIIPELPHQNMAKML 463 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + + + + +T LL + ++ Sbjct: 464 ASSILTLFEQAFKIEGQEFFVSTSIGMSIYPQDGDTAATLLKKADTSLYRAKDAGRN-GF 522 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGG 531 + ++ +++ L + A+ D+ +Y QPI + + G + ++ + G Sbjct: 523 SFYNDSMNQDIQRKLTLNVRLHQAISLDDIEIYYQPILDLASRKIIGAEALMRWTDSELG 582 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL-QKNIA 590 +++PD+F+PL + L + VL+ A+ + ++N + + + Sbjct: 583 VVSPDEFIPLAEKNGLIHKLGDIVLQRACSQAASWQSI-TPLKMAINFSSVQFRYSEQLQ 641 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 RI+ + + + + +E+TE M + L + G ++IDDFGTGY+ Sbjct: 642 ARIVEVLAQTGLPADKLDMEVTESLLIDQESGLMTMLAYLKQLGIEMSIDDFGTGYSALS 701 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L++ +KID F+ + ++ D +V +I +AK+ + VVAE +E +QQ L Sbjct: 702 YLQKFSFSKLKIDRAFINKMASSKSDKALVTAILAMAKSLEMKVVAEGIEDEQQAQFLQS 761 Query: 711 LGVQYLQGYLIGRPQPLA 728 G ++ QGYL RP Sbjct: 762 HGCEFGQGYLFSRPVTAE 779 >UniRef50_Q7UTZ4 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UTZ4_RHOBA Length = 614 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 95/525 (18%), Positives = 191/525 (36%), Gaps = 22/525 (4%) Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 L + + + I + + + +W + L + Sbjct: 79 NDRYSLAFVDMRMPPGMDGLQTIGELWKIDPELQIVICTAYSDHSWEHAVSVLGHTENLL 138 Query: 282 LQG----VETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN-RRWHLQALTDPLTLLPN 336 + +A L + R + AL D LT L N Sbjct: 139 ILKKPFDDVEVLQIAVALTCKWDSARAAGLKHRELEELVRVRTAELERVALHDGLTGLAN 198 Query: 337 FRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + + +D + ++ G IR + + L ++ Sbjct: 199 RIKFNDRLRDSLANANSQPPAVLLIDLDQFKLINDTLGHPAGDELIRIVGQRLSAVVGAA 258 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 + +L G E +VL T+ ++ + + + S + + + Sbjct: 259 GLVARLGGDEFAVVLDHNPTQRTIESIADGIQSSVAEPVLLDGVPFSVTASIGICGSPDE 318 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 L+ ++ A A E+ + Q ++ ++ +R A+ + +L+ Sbjct: 319 NCDADELIRNADIAMYRAKADGRDCA-RYFEKGMDQQLRQRQMMEANLRAAIANDEFVLH 377 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + K+ ++ +L + G++ P F+PL + L + VL K Sbjct: 378 FQPLLDPNTKKVCSFEALLRWEHPERGLVPPLDFIPLAEETGLIRQIGDWVLLEACKEAC 437 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 P R +VN+ + + + ++ I+ + + +EITE + ++ Sbjct: 438 NWPE---HIRVAVNVSAIQFRGGTLPKSVSDAIEQSGIAGERLEIEITESVLMGESLDAL 494 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L G RIA+DDFGTGY++ L+R + D +K+D FV+++ IV +I Sbjct: 495 DQLHALRAQGVRIALDDFGTGYSSLSYLRRFRFDKLKMDRSFVQNLNQ-ADAMAIVSTIA 553 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L K ++ AE +ET+QQ + + G +QGYL GRP P + Sbjct: 554 NLGKCLGMATTAEGIETEQQMRCVMEHGFTEVQGYLYGRPIPSTE 598 >UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15V87_PSEA6 Length = 1524 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 94/487 (19%), Positives = 187/487 (38%), Gaps = 21/487 (4%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-----SFSVCLLYMVRIYHRSE 316 F + ++ + E + + + + L ++ + Sbjct: 1029 FWSKLESLEASEDWRGEDQIMLQNEEVRDVLVYIKAVACINDVTDIDSYLIILSDISEHK 1088 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + A D LT LPN L + + +D + ++ G Sbjct: 1089 KAQQALIKLANFDALTGLPNRALLLDRVDHAIYQAQRSASTLGLFFIDLDKFKQVNDSLG 1148 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 ++ I LL L+++ + + +L G E ++++ T L H+ + + Sbjct: 1149 HNAGDTLLQEISARLLNLLRKEDTIARLGGDEFVVLIENVHTIDDLTHLASQIIEIIDTP 1208 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + N + + + + + Q LL + + ++ Sbjct: 1209 VQLENHLVSVSSSIGIALYPDDAQDAQELLQNADIAMYHAKENGRSH-FQFFTAKMNVLA 1267 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ L + ++ A L Y QPI + + G++ ++ G ++P +F+P+ Sbjct: 1268 QQRLALESDLKYAHSHQQLENYYQPIIDISRNKIAGFELLMRWFTDT-GKVSPGRFIPVA 1326 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L LQ +E L + SVNL +I + Sbjct: 1327 EELGLIESMTLQAMERALPMFKHWQANGFDGYLSVNLSARHFESLQSIKDVIAFLASNAL 1386 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + V EITE + + ++ ++ L + GF IA+DDFGTGY++ + LK +IK+ Sbjct: 1387 PVEMVRFEITESALMKDYQKAIIYMKHLREAGFSIALDDFGTGYSSLKYLKEFPLSVIKV 1446 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV DI N + ++ +I +A++ + VAE +ET++Q A + Q+LQG+ Sbjct: 1447 DKSFVDDIGINKNNEALIETILRMAQSLDMYCVAEGIETKEQVAFFKEHDCQFLQGFYFS 1506 Query: 723 RPQPLAD 729 RP LAD Sbjct: 1507 RPVALAD 1513 >UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Halorhodospira halophila SL1 RepID=A1WT40_HALHL Length = 836 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 102/568 (17%), Positives = 199/568 (35%), Gaps = 27/568 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF--TLSWLAALSVLLLLLCTPYENDF 238 R + + RR + + T Y Sbjct: 247 PAHLLNLRDVTERKHIETELRRAAIVFEEAHEAILVTDAEQRVITANPAFTEMTGYTEQE 306 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + G + + F + + A++ T ++ + + Sbjct: 307 VLGKDLALLRSGF-----HDESFYTAIDDALAKQGYWTGEMWNRCRDGTTFATLVTVRAI 361 Query: 299 ---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA------- 348 L ++ R + + +DPLT LPN + Q Sbjct: 362 YDDAGHLTHYLAVLADISRLKEYQSQLERIMHSDPLTGLPNRLVFQDRLHQALVANQKQT 421 Query: 349 -GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +++L+ ++ G + ++ + L + E + +L G E ++L G Sbjct: 422 GFFAVLSLDLNDLKAINYSLGHAVGDAILQQLAERLRNALCEEHTVARLGGDEFGVLLLG 481 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + L + + + + L Q + Q Sbjct: 482 VRDASEVAAITEDLSKGLDEPFQIADRAIPIAASIGIAVYPEQDAGAADLFQQANAAMHQ 541 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDE 521 + ++ E ++ Q ++V L + +R AL+QG L L+ QP + G + Sbjct: 542 AKREG--VSYRFFSEDLTEQARERVQLGSELREALNQGALELHYQPQIDLSSGAWVGLEA 599 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLM 580 ++ G ++P++F+P+ + L VLE + R VN Sbjct: 600 LIRWHHPVQGWISPERFIPVAERIGLVTTLGAWVLEQACRQGRIWLDAGFEFGRLGVNFA 659 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L ++A R++ R + + + +E+TE + ++ L G +A+D Sbjct: 660 APELSAPDLAERVLAALDRARLPARYLEIEVTERLLVDPDPEVIQQLQLLRNHGVTVALD 719 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY+ L+ L D +KID FV + + I ++I L + +++AE VE Sbjct: 720 DFGTGYSALSYLRDLPVDRLKIDRSFVDGLPDDERTLAIAQAIAGLGRNLGFTIIAEGVE 779 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T Q+ L +G + QG+L GRP P+A Sbjct: 780 TPAQREALIGIGCPWAQGFLFGRPAPVA 807 >UniRef50_Q3A5Q2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5Q2_PELCD Length = 734 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 112/576 (19%), Positives = 205/576 (35%), Gaps = 33/576 (5%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL-----AALSVLLLLLCTPY 234 +L Y + M+ S + L SL + + +L Sbjct: 117 LLLRYRVMHMLRSARLCEDLRVSQARISLAQRIAHLGHWHFNFKTKDFVCSDAVLSLLDR 176 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 +D + I +++ N NY N S I Sbjct: 177 RDDISVHNPESLLRNIHPDDKPRVQAALENAI-GNRQPYQENYRINVQGEERRINSQGEI 235 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQE 347 + +++ ++ A D LT L + + E Sbjct: 236 QTNGNGEPEAITGIIQDVTDIYHAEQKIFRLAHFDALTGLAKRKFFMEKLAEAVFLTEHG 295 Query: 348 A-GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-----------ENEKLYQ 395 + L +D + ++ + G + +R + + + +Q E+ + + Sbjct: 296 HGQLAVMILDLDRFKRINENLGHVPGDQILRKMAKRIQRSLQQCHVLYPSSLTEDHCIAR 355 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 G+E ++L + ++ + L ++ ++N + + F + Q Sbjct: 356 FGGNEFAILLPEVQDTHQVNRIAGHLLKDIAQPFTFDNCEVLITTSIGICLFPEGSDDQQ 415 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 ++ Q+ + + T +++L N +R AL + +LY QP Sbjct: 416 DIIRNADIALRQAKSQGRD-TFRLYHPSMGKPTQDRLILENDLRNALKNDEFVLYFQPQV 474 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + + G + ++ G+ P FLPL + L D VL +A Sbjct: 475 DIRSGQLLGAETLIRWQHPQQGLKLPGAFLPLALESGLIIEIDQWVLRQACAQIARWQAA 534 Query: 570 KKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 R SVN+ Q+ +A I + ++ I A+ +E+TE N ++ + Sbjct: 535 GYDKLRLSVNVSGQLFAQEGVAALISDIVRQSGIPTGALEIELTENTLMQNNAQTISTLT 594 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L + G IAIDDFGTGY++ LK D +KID F++D+ D I R+I L + Sbjct: 595 DLKQLGTNIAIDDFGTGYSSLSYLKNFPIDTLKIDRSFIRDLENAPGDIAITRTIIALGE 654 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 L+ + E +ET QQ+ LL LG QGYL RP Sbjct: 655 NLGLTTICEGIETHQQKDLLVDLGCYIGQGYLFARP 690 >UniRef50_A9KPL6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KPL6_CLOPH Length = 547 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 91/429 (21%), Positives = 175/429 (40%), Gaps = 15/429 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAGKSFCCLRIDNLEFMSRH 366 + A +D LT LPN A + Q + IDN + ++ Sbjct: 106 ELKKSKEIVKRMAYSDYLTSLPNRLAFVELLDGIMATIRQNEIVGILDIDIDNFKDINDT 165 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILNS 423 G + + L L++EN+ L ++ G E +++ L+ + + + Sbjct: 166 LGHSYGDEMLIDVMHRLEELIKENDYLSRIGGDEFAILIQNLTDLSELEERILEVQQIFA 225 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + +T Q L+ ++ ++ ++ ++ Sbjct: 226 TPFRVATREFFITVSIGVAIAPKDGKTTQSLVKNMNSAMYEAKERGKN-NFCYYDDSINL 284 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLP 540 + +++ + + +R A+++ ++Y QP N G++ + + GI+ P F+P Sbjct: 285 KMMQKLEMQSELRKAIEENQFVVYYQPQINLVNDRVVGFEALARWQHPEKGIIAPIDFIP 344 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + ++L L + + +VNL K+ + + + Sbjct: 345 LAEDNGMIVAIGKKMLYESCMQLRSLQESGYRDIVIAVNLSARQFKDKDFLPMVYEILEE 404 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + + EITE A + E S+ I +L + G A+DDFGTGY++ LKRL + Sbjct: 405 TKADARGLEFEITETVALDDLEFSISTISKLKEIGITFALDDFGTGYSSLNYLKRLPVNN 464 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F+ I+ N D IV ++ DLAK ++ V+AE VE +Q+ L ++ QGY Sbjct: 465 LKIDKSFLDTILENNSDQKIVHTMIDLAKHLNIEVIAEGVELSEQEKFLKEINCGKAQGY 524 Query: 720 LIGRPQPLA 728 G+P P Sbjct: 525 YYGKPVPKE 533 >UniRef50_B8FI78 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI78_DESAA Length = 858 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 102/564 (18%), Positives = 207/564 (36%), Gaps = 32/564 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + + ++ R A + R + L+ L T ND + L Sbjct: 298 MISLAKDGKLVSAVYSRLPAGFIRAVGRQRICPE-SGLAAAAYLGETILVNDASSNPLWD 356 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVLISFSVC 304 F + Y L+ L +++ Y + + E + +L + L S ++ Sbjct: 357 NFRSLAQEHGLHACYAAPILSGKGQLLGVISLYYKESVDPAEEDLALLKAVTDLASVAI- 415 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 L QA D LT L N AL + E+ E + + Sbjct: 416 ---------EKVRLTETLVYQARHDDLTGLANRGALREWLERSLNAAKRYEEMLALLYID 466 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL-- 414 +D + ++ G ++ ++ + LL ++++++ L ++ G E +L S E++ Sbjct: 467 LDRFKQVNDSLGHVVGDQLLKEVVSRLLRIVRDSDILARMGGDEFVLAASRLESKEDALG 526 Query: 415 -QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + L + F + + L+ + Sbjct: 527 MGRRIRQIFREPYRIQDHELYLDASIGISFFPEDAQDAGKLIRHADTAMYYAKIRGGNR- 585 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 L E + +++ + N +R A++ + L+ QP +K G++ ++ + Sbjct: 586 LAEFEPQMKMAVLERLEIENDLRKAIENKEFELFYQPQYELASKRLIGFEALIRWNHPEL 645 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNI 589 G + P KF+PL + L V+ A G + SVN+ + + Sbjct: 646 GRIPPLKFIPLAEETGLIIPIGEWVVHEACAQNARWAKAGYGSFKVSVNVSSVQFADEGF 705 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ + + + +E+TE + +S + + G AIDDFGTGY++ Sbjct: 706 LDVLVSALNKSGMESHHLEIELTESILVKDVKSIANMLSGVKSLGATTAIDDFGTGYSSM 765 Query: 650 ERLKRLQADIIKIDGVFVKDIVTN----TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 L L D +KID FV + + ++ I +++ L+V+AE + +QQ Sbjct: 766 SYLHDLPIDCLKIDRSFVINTGDDTFASERKRNLLSKIVEMSHDLGLTVIAEGFDNKQQF 825 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L K+G QG+ +G P + Sbjct: 826 DYLVKIGCDVGQGFYLGVPMSAPE 849 >UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DIH6_THEEB Length = 1292 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 100/564 (17%), Positives = 183/564 (32%), Gaps = 36/564 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFF--- 248 + E+R L+ + + LL L + + G+ Sbjct: 723 ITERKATELALRESEERYRLLAENTSDIICLLDCQGSCLYVSPSYETLLGWPTETLIGEH 782 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + +++ + L ++ + Sbjct: 783 FTQLCHPEERSRVKQELQQMIEQRQ---FWPITYQVCTARGDVLWLETLVKPRYDSQGHV 839 Query: 306 L---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFC 353 R + + H A D LT LPN + + Sbjct: 840 QQLQTTSRDVTSRVQVQMQLHHDAYHDSLTGLPNRLYFMEQLAAAISQAQTNPQFHYAVL 899 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 +D + ++ G + + + L L+ + + G E +++L+ R Sbjct: 900 FFDLDRFKVINDSLGHGVGDQVLIAFATWLRRLVGNQYTVARFGGDEFVILLTHVPHPQR 959 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + L + + + + ET +L + Sbjct: 960 AIALCEELIHSLQQPLRVGERQIFLSTSIGVVFAQNEYETGMAVLRDADTAMYAAKRQSG 1019 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 + + Q +++ L + +R AL+QG L L QP+ + G + ++ Sbjct: 1020 RR-YAVFDTQMYEQVLERLHLEHDLRQALNQGGLQLLYQPVVHLQSQRLVGMEALVRWQH 1078 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTL 584 + G+++P F+P+ L D L L T SVN+ TL Sbjct: 1079 PERGLVSPAHFIPIAEDTGLIVALDQWALAQACWQLWTWRQQYSTAANLVLSVNVSAKTL 1138 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + +RY + ++LE+TE + +E L I+IDDFGT Sbjct: 1139 QDPTFLQHLDTIRQRYPLPKGQLLLELTERIGIELGSEMLSLLESLRHRHVEISIDDFGT 1198 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+ L L +K+D FV + N + I+R I L+K V+AE +ET +Q Sbjct: 1199 GYSCLSYLHSLPIQHLKVDRSFVSQLEENERNLQIIRMILLLSKQLGYRVIAEGIETPKQ 1258 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 +L +LG QGYL RP P Sbjct: 1259 LQILQELGCDEGQGYLFARPLPPE 1282 Score = 47.7 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 21/214 (9%), Positives = 43/214 (20%), Gaps = 21/214 (9%) Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 P +V L + + + T +DL L + L + Sbjct: 400 AFPGAWLLIPLIVADRVWGSLTLFNYPEPHEWSRTEIDLARAVATQLEVAIYQATLYQ-- 457 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL---------LCTPYENDFIAG 241 RR A E+ + ++ + + + G Sbjct: 458 -QAQQELAERRRIEATLRQSEECFRLTATNVPGAIFRYIQYPDGRNRVFYLNPMCERLWG 516 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTW-----AVSTLCLLNYNQNFLQGV-ETEYSLAFIL 295 + TW + TL + L Sbjct: 517 VPAEAAAEDGEHLWQLVHPEDREATWQSVLRSAETLTPWFAQWRIIHPTTGEIRWLEGAG 576 Query: 296 AVLISFSVCLLY--MVRIYHRSEWLNRRW-HLQA 326 +++ ++ R QA Sbjct: 577 QPTRDADGAVVWHTVILDVTDRHLAEARLKEQQA 610 Score = 42.3 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 10/196 (5%), Positives = 32/196 (16%), Gaps = 8/196 (4%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 S+ ++ T ++++ + + H Sbjct: 540 ATWQSVLRSAETLTPWFAQWRIIHPTTGEIRWLEGAGQPTRDADGAVVWHTVILDVTDRH 599 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 A+ + A R + + +P + + Sbjct: 600 LAEARLKEQQAQL-ELAARVSNIGFYFCDLHTGTFYVSPSYKAQLGYPATTQEVNLEDWE 658 Query: 255 VGKLRYPFLNLTWAVSTLCLLN----YNQNFLQGVETEYS---LAFILAVLISFSVCLLY 307 A + T A ++ ++ Sbjct: 659 ERLHPEDRDRALAAYRQFLRGEAHYSIDLRLRHCNGTYRWFHSEAVLIHDEQGQPSKVVG 718 Query: 308 MVRIYHRSEWLNRRWH 323 + Sbjct: 719 TNVDITERKATELALR 734 >UniRef50_A3J9Q2 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J9Q2_9ALTE Length = 1020 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 104/565 (18%), Positives = 206/565 (36%), Gaps = 29/565 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYL 243 +I H L ++D + + + T + +V++ I GY Sbjct: 446 LIEELHQRNSLRQQDQDGNDQQPVTSQTFLDQTSEAVVIAGADGRIQSVNRSFCEITGYT 505 Query: 244 VPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + L +S + Y ++++ + Sbjct: 506 SKEAIGGSPSILKSGIHTTHFYEALGLCLSENDRWKGEIWNRRKNGEVYPQLGSISIIRN 565 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAG 349 + + +++ DPLT LPN + + + + Sbjct: 566 DDGSIRNYVAVFSDVSKTKEAENNLFFAQNHDPLTGLPNRQYCLDKVSHVIAERAQTVHE 625 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L ID + ++ G +R++ R L +N L + E +LVL Sbjct: 626 VAVVFLDIDRFKLLNDARGHHTGDSFLRAVARRLAEACPKNGLLCRWGADEFVLVLEQVT 685 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 R+ +V L ++ + L + + Q L+ + Sbjct: 686 NRDRIAVIVQTLFNALAKPLKLEGHELIPSACVGISFYPEDAADAQGLMQAAETALYLAK 745 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 +++ +++ + ++ + + +R A+ +L L QP + G + ++ Sbjct: 746 ERGP-SSIELFTPLLAERLQRKFEVASELRRAVQNDELTLNYQPQVDCKTAALLGVEALV 804 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPL 582 G+M+P F+PL + L VLE + +A +VN+ P Sbjct: 805 RWQHPVNGLMSPATFIPLAEELGLIGLLGDWVLEKAMAQMARWRDQGHPIPQVAVNIAPQ 864 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L+ A I L ++ + + LEITE + + ++ L G +AIDDF Sbjct: 865 QLV-PGFADHIRDLLAKHQLPASMLELEITEGAL-ERDDRIIGLLQALRDMGVLLAIDDF 922 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ +K L +KID VF+ D+ + + I+R++ L + V+AE VET+ Sbjct: 923 GTGYSSLAHIKHLPVTCLKIDKVFIDDLPDDAYNVAIIRTVLALGHSLGFRVLAEGVETE 982 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 +Q L + G+ +QGY G+P Sbjct: 983 EQFLFLVEQGIDTIQGYYFGKPMEA 1007 >UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSS6_9CLOT Length = 916 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 98/551 (17%), Positives = 199/551 (36%), Gaps = 29/551 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGK 257 + + + A +L+ ++ + I+GY Sbjct: 357 QLNEELSISDRIISTAMEGILITDSSGNIIKVNNSFERISGYKGEELIGKNPRVLKSGHH 416 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHR 314 + +LN+ + T + Y + L + + + Sbjct: 417 NKSFYLNMWNDLLTYGYWEGEIWNRKKNGELYPKWMSITCLKKQGGIIENYIAISTDITK 476 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRH 366 + + A D LT +PN + E + + +D + ++ Sbjct: 477 IKKTEDKLQSLAYYDLLTGIPNRTLFYERLENALIRANNNKGSVALLFMDLDGFKVINDS 536 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G ++ + + + ++ + +L G E ++L + + + Sbjct: 537 LGHAAGDLLLKEVAARIESSISRSDTVSRLGGDEFTVILENVNNHEDAKAAAESIIGKIL 596 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + +G ++ T++ L+ + + + + Sbjct: 597 LPYSILGREITLGVSIGIALSPYDESTVEGLVRKADAAMYDAKESGKGK-YSFSSDEIER 655 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR-----NKEGEGYDEILARLKYDGGIMTPDKF 538 + + + + + ALD + LY QP + G + ++ DG I TPDKF Sbjct: 656 RNHEILEMQIKLNKALDNNEFNLYLQPQIIFAENEFKIIGAEALIRWKTIDGKIFTPDKF 715 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ + +LE + + + + S+N+ N+ +I LFK Sbjct: 716 IPVSETNRMIIPIGNWILEEIFRIDKVLKDNGINIKLSINISSKQFENGNLVSKIKELFK 775 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 +++EITE + ES++ ++ ++ K G I+IDDFGTG+++ L RL D Sbjct: 776 ENDSQNIDLVIEITESFLLQDTESAIQSLLEIKKLGIEISIDDFGTGFSSLSYLARLPVD 835 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ DI+ +T + +I +AK +L VAE VET++Q L G LQG Sbjct: 836 YLKIDKSFIDDIL-STNHKNLTSNIISMAKTLNLKTVAEGVETEEQANRLMDEGCDELQG 894 Query: 719 YLIGRPQPLAD 729 Y +P + D Sbjct: 895 YYFSKPLIIDD 905 >UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TT69_ALKMQ Length = 1242 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 106/609 (17%), Positives = 215/609 (35%), Gaps = 30/609 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 FD +I G I+ VV++ L Y + + I + Sbjct: 473 FDMEFRIIRPDGSVRHIYQVVEMTFDLEGHLTYRR---GIIQDITERKALVKKMQGIQEN 529 Query: 207 SLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYL--VPVFFIIFTLGVGKLR 259 +KR L ++ + + + I GY + + Sbjct: 530 INHIQKRFQVLIRDSSDVFEIVSPDGTIEYISPAVEKILGYQPKEMEGRNLMEFAWEIEK 589 Query: 260 YPFLNL--TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--CLLYMVRIYHRS 315 + + + + + + + ++ R Sbjct: 590 PKLEKMFKVALSEPNKNIKREISAETKLGKRIYVELTMNNQLEEPSIKGIVLNWRDVTER 649 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHY 367 ++ + A D +T LPN E +A E+ + L ID+ ++++ Sbjct: 650 VEAQKKMNHIATHDQMTQLPNRLHFEKKIEYQCQEAKEKGTTFAVMMLDIDDFKYINDAL 709 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 G+ I R L + E + + G + +++ + +++ + S Sbjct: 710 GMGFGDQLITQAARRLKDFLGETRCICRYSGDQFGILIYNLKDIEAYKNIAMKIIDLFSS 769 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + + + Q L+ + ++ + + + Sbjct: 770 SFKIDPYEIYITMSVGVAIYPDDGQETQSLIKHGNIALFRAKEAGKNR-YEMYSPKMDVK 828 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 K L N +R A+ + +Y QP N + G + ++ G+++P +F+ L Sbjct: 829 NYKAFTLKNDLRRAIKNNEFKVYYQPQVNLQTSEIIGAEALIRWEHPTWGLVSPKEFISL 888 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +L + + D + SVN + QK+I I + Sbjct: 889 AEETGFIITLGNWILRQVCETYQKWLKDGLPAIKVSVNYSGIQFFQKDIVENIKNTIHEF 948 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P +++EITE + ++ +I+ L + G ++AIDDFG G+++ L DI+ Sbjct: 949 QLDPHFLVMEITETVLMNQSQQVSADIQSLQELGIKVAIDDFGAGFSSLTYLNSFNVDIL 1008 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+K I + I+ ++ +LAK + +VAE VET Q + L KL QG+L Sbjct: 1009 KIDRFFIKGIPLDETSNRIIEAVINLAKDLRIRLVAEGVETWDQLSYLRKLNCTVGQGFL 1068 Query: 721 IGRPQPLAD 729 RP P D Sbjct: 1069 YSRPVPQED 1077 >UniRef50_A2SIL3 Signal transduction protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SIL3_METPP Length = 965 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 107/672 (15%), Positives = 217/672 (32%), Gaps = 17/672 (2%) Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 + + + LG F L + + + Sbjct: 6 AALTLVAASPTPPGPEYALREVLDRLGPSVFAGLLDADGVLRYANQAALQAIGATPEQVL 65 Query: 125 LFWLGLVT---PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 + + S F + + + + Sbjct: 66 GLRFETTPWWQGCKLSQRRLQQALASASRGEASRFDVRLAIRGDTLAMDFSLLPLYGPDG 125 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 +L + R+ E+ L + + Sbjct: 126 RVAWLIPSAHDVSERERARRQLRLTRHAVEQAHDALFLVGPDGAYRDANAAACRLLGLTR 185 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + + + + + + + N E + ++++ S Sbjct: 186 KQL-LRLRVHDIDTQVNETSWPQRWHEMCERGSSRFETNVRHHDGHEIPVDVSVSLVTSD 244 Query: 302 SVCLLYM-VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKSFCCLR 356 ++ V RR D LT LPN + L + + A + L Sbjct: 245 GETFAHVCVDDLRDRRAAERRIQQLLQFDELTGLPNRQRLFEHLGATLQTSATTAVLVLE 304 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS--GPETEGRL 414 +D + ++ G + +R + + ++ + + + G E ++V+ Sbjct: 305 LDRFKRINDGLGPQIGDAVLREVAGRIAATVRSVDLVARRGGDEFVIVMPAPSVPAPHVA 364 Query: 415 QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 Q ++ + +R + + + G + + LL + + EQ+ + Sbjct: 365 QTLLETI-ARPMTIEGHEIHLTCGIGIAMAPADGDRADTLLRRANAALEQAKRLGRNQ-V 422 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + +Q+ L +R AL L+ QP + G + +L G Sbjct: 423 NVYAGAPHDDDPEQMALETALRHALRDEQFELHYQPQVDLAQGRIVGVEALLRWQHPTLG 482 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIA 590 ++PD+F+P+ + L VL ++ A R +VNL LLQ ++A Sbjct: 483 RISPDRFIPIAEETGLIVPIGDWVLRHAIEQAAAWQRARLPPLRMAVNLSARQLLQPDLA 542 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 RI L + P+ +E+TE N + ++ ++ L G +++DDFGTGY++ Sbjct: 543 RRIEGLLAATGLDPRRFGVEVTESMLIGNFDQAVQHLRALRALGVEVSLDDFGTGYSSLS 602 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+RL D++KID V D+ D I R+I +A + V+AE VE++ Q ALL Sbjct: 603 YLRRLPVDVVKIDRSLVPDVTAPAEDVSITRAIITMAHQLQMKVLAEGVESEGQAALLAA 662 Query: 711 LGVQYLQGYLIG 722 +QG+ Sbjct: 663 NQCDQMQGWWFS 674 >UniRef50_Q1GVY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphingopyxis alaskensis RepID=Q1GVY5_SPHAL Length = 878 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 117/739 (15%), Positives = 246/739 (33%), Gaps = 31/739 (4%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVML---SILFIFGWRGVVPVLCGMFCT 74 F ++ + + + + +F + S+ + + Sbjct: 27 FVAQLLRVATLWHYVLIGRLLAFAVFSVLPGVAGFFDQPSLWLTMASGLMCDAALTVMGQ 86 Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 + + A + + ++ + + + + + + Sbjct: 87 AMRRPRPALAARARQVAMLSAALVALGTLFNAAAMFAAIAMPDGGRHFDAFTAIQIGSLL 146 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 ++ +V F F G L L+ M+ + + Sbjct: 147 VAASAVSIVRPLFFSFSGAVAFGGALGVASWPFALAGAVFLALLIVMMREDVRHQRRATA 206 Query: 195 FAQILWRRDIAPS---LGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 A+ E+ W L+ + + Sbjct: 207 AARRAISEQQRALNLMRDFERAGRGWFWETDRDGQLVYISPTVAARLGRPLAELIGRPFT 266 Query: 252 TLGVGKLRY---PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL--- 305 + ++ L +++S+ E + + + Sbjct: 267 DIIRKRIGNDESEERTLGFSLSSRTPFKELTVQAAAPGEERWWSISGHPISNALGHFQGF 326 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQAPEQE----AGKSFCCLRI 357 + R + A D LT L N R LE+A + + + Sbjct: 327 RGSGTDLTDQKRSEREINQLARYDTLTGLANRRHITDLLERALRTHIGQPQPCALLLMDL 386 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + ++ + L ++ + ++ +L G E +VL ++ + Sbjct: 387 DRFKAVNDTLGHPVGDQLLQQVAGRLTQIVGDKGQVGRLGGDEFQIVLPQLNHPEKIAGI 446 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 N + ++ + +G DG + L+ + Sbjct: 447 ANAIILSLAKPFAIEGEQVRIGSSIGIAVSDGEGVSASALVRNADLALYAAKDAGRG-VY 505 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGG 531 + + Q +++ + + +R AL + +L L QPI + G++ ++ G Sbjct: 506 RFYADAMHNQASERKAIEDALRDALAKDELRLLYQPIVDVATERISGFEALIRWNHATAG 565 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 ++P+KF+P+ + NL ++ + +AT G R +VN+ P + + Sbjct: 566 TISPEKFIPIAEESNLIVPIGEWIIRTACAAIATL---GSGYRVAVNVSPRQFANEALPA 622 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I+ I P+ + LEITE + ++ +L + G R+A+DDFGTGY+ Sbjct: 623 TILSAVSGAGIRPEQLELEITEGVFLDESAENLAMFRKLKRTGVRLALDDFGTGYSALGY 682 Query: 652 LKRLQADIIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ D IKID FV ++++A I+ SI LA A + AE VET AL+ Sbjct: 683 LKKAPFDKIKIDQSFVLGAADKSSMNAAIIASIVGLASALDMETTAEGVETHDDLALVRS 742 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG ++QGY+ G+P LA+ Sbjct: 743 LGCSHVQGYIYGQPMQLAE 761 >UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacillus cereus group RepID=Q81HZ8_BACCR Length = 567 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 101/490 (20%), Positives = 204/490 (41%), Gaps = 25/490 (5%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWL 318 F +L + + T Y + + ++ + + + Sbjct: 72 FQDLWKRILNGKVWTGEIRNRAKDGTYYWVKTTIVPFLNEKGEPYQFIAIRNDISSRKEA 131 Query: 319 NRRWH-------LQALTDPLTLLPNFRAL----EQAPEQEAGKSFCCLRIDNLEFMSRHY 367 R A D LT LPN L + + +D + ++ Sbjct: 132 EHRLRLSESRYRELAYHDALTSLPNRLQLITTVNELIADKKEFGMIYFDLDRFKLVNDTL 191 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---R 424 G M+ + + L ++ E + L +L G E ++L+ + + + + S Sbjct: 192 GHMIGDLLLSEVASRLHYVLGEKDVLARLGGDEF-VLLTKNHRQDDMSQLATSVLSCFQA 250 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + + ++ LL + A + + + Sbjct: 251 PFMLEGHEVYISASLGLCSYPQDGQDVETLLKNSDLAMYSAKEQGRNAA-CFFTDELRAK 309 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPL 541 +++ + ++ A+ +L + QPI + + G + ++ + D G ++P +F+P+ Sbjct: 310 INRRMKVEFALQKAIRDEELDVALQPIIDLKTKRYSGIEALVRCMTED-GPISPSEFIPV 368 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L + VLE + T P ++G + SVNL L+QK + + KR Sbjct: 369 AEESGLIIKLGDWVLEKSCRLFKTLPNYQEGLKLSVNLSIQQLMQKRFILSVRSILKRTG 428 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 P +ILEITE A + + + +++L G IA+DDFGTGY++ LK+L DI+K Sbjct: 429 FPPNRLILEITESIAVRHFDYIIATLQELRNMGVLIALDDFGTGYSSLYYLKQLPLDIVK 488 Query: 662 IDGVFVKDIVTNTL--DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 ID F+++ + + IV+S+ ++A + +L+VVAE VET +Q++LL + Y+QG+ Sbjct: 489 IDRNFIREFHYDHAQPERTIVKSVIEIAHSLNLAVVAEGVETVEQESLLQSMSCDYVQGF 548 Query: 720 LIGRPQPLAD 729 +P + + Sbjct: 549 YYAKPLSVGE 558 >UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Burkholderiales RepID=D0J3T4_COMTE Length = 728 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 131/712 (18%), Positives = 240/712 (33%), Gaps = 64/712 (8%) Query: 41 YIFLAWMPLCVMLSILFIFG-----WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTF 95 +F +++ L + + G W + ++ G + + + + LG Sbjct: 30 AVFASFVTLGLARRMRMASGRIGRIWWAIGAMVMGTGVWAMHFIGMQAFELPITLGYSGA 89 Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 + L + + + Y W L+ GI YL + + I+ Sbjct: 90 LTLASWVAAVAASALAFGVATRAEYRWPHFLGASLLMGGGICAMHYLGMLAIEMSIPIAW 149 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 + A + L S L + R+ A Sbjct: 150 DWPLVAASALIAVLASATALTLFRALFSLSGKRL--WLFQTLAALVMGFAICGMHYTGMS 207 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 S+ + L + E I + I +L Sbjct: 208 AASFASGSVCLSAEALSGPELTTIIIITTVMLLIAAMFSTLLDARLQSTAFKLNQSLQEA 267 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 N + + N +A DPLT LP Sbjct: 268 NA------------------------------------KLQLANTELRQRAFADPLTNLP 291 Query: 336 NFRALEQAP-------------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 N E + + +D + ++ +G + S Sbjct: 292 NRLLFEDRLIHALLRLERANRSRTKERLGILFVDLDGFKPINDSFGHAAGDQILVSAAER 351 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGA 439 L+ + ++ + ++ G E L++L + + N + S+ N L + Sbjct: 352 LMAEARSSDTVARVGGDEFLVLLEDTQDVAACMAVANRILKALSQPFRLGNKELQITCSI 411 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + L+ + + E + ++Q+ L N +R A+ Sbjct: 412 GIVAFPDHG-DRDHLIANADAAMYAAKRNGGN-GFAVFEPHMGSDASEQLELQNDLRHAI 469 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +G + L+ QP + G + +L + G++ PD F+PL +F + V+ Sbjct: 470 QRGQMELHYQPKIDSERGNIIGVEALLRWAHPERGMIAPDIFIPLAERFGIINSLGNWVI 529 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 E + LA R ++NL L + +A RI + R+ + ++ EITE A Sbjct: 530 EEACRQLALWRDMGLQMRVAINLSVHQLRESGLADRITQTLLRHDVQASQLLCEITESVA 589 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + +++ IE+L G ++IDDFGTGY++ L++L A +KID F++D+ T Sbjct: 590 MEDTQATQRAIEELRDIGIFLSIDDFGTGYSSLNYLRQLPAQQLKIDRSFIRDLETEEDA 649 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +V ++ LA A L VVAE VET Q+ +L + LQGY RP P Sbjct: 650 RAVVHAVVRLAHALGLRVVAEGVETAGQRDILIDMQCDELQGYFYARPMPAD 701 Score = 67.7 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 82/318 (25%), Gaps = 11/318 (3%) Query: 5 HNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL------- 56 ++ ++ + F + ++ S + S +A L ++ Sbjct: 59 GAMVMGTGVWAMHFIGMQAFELPITLGYSGALTLASWVAAVAASALAFGVATRAEYRWPH 118 Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 F+ + +C M + +S ++ A R + L Sbjct: 119 FLGASLLMGGGICAMHYLGMLAIEMSIPIAWDWPLVAASALIAVLASATALTLFRALFSL 178 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 + + +W LV I Y S F +A + + ++ + T + Sbjct: 179 SGKRLWLFQTLAALVMGFAICGMHYTGMSAASFASGSVCLSAEALSGPELTTIIIITTVM 238 Query: 177 LIYNMLFYYLT--RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 L+ +F L R+ + + A ++ L+ L L Sbjct: 239 LLIAAMFSTLLDARLQSTAFKLNQSLQEANAKLQLANTELRQRAFADPLTNLPNRLLFED 298 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 L +G L + +Q + E + A Sbjct: 299 RLIHALLRLERANRSRTKERLGILFVDLDGFKPINDSFGHAAGDQILVSAAERLMAEARS 358 Query: 295 L-AVLISFSVCLLYMVRI 311 V L ++ Sbjct: 359 SDTVARVGGDEFLVLLED 376 >UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTV0_CHRVO Length = 1390 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 107/552 (19%), Positives = 210/552 (38%), Gaps = 26/552 (4%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + + + + + + V+ I GY + Sbjct: 821 VFEQTQKEAAAVFDSSYEGILMVNPDGVI---TKVNNAFSRITGYSAEEAIGQKPSLLAS 877 Query: 258 LRYPF---LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRI 311 + P L +V + Y+ ++V+ + + Sbjct: 878 GKQPISFYEELWNSVKGHDFWRGELWNRRKSGELYAELLSISVVRDEQGQVQHYIGIFSD 937 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + + A DPLT +PN R L Q + C L +D + + Sbjct: 938 ITQLKQHEAELDRVAHYDPLTGVPNRRLLSDRLRQAIVRANRSGRSCAVCFLDLDGFKAV 997 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + YG + + ++ L +++ ++ L +L G E +++LS + +++ + Sbjct: 998 NDKYGHAVGDQLLVTVSNNLKSILRGDDTLARLGGDEFVVLLSEVGSPEECMLVLDRVLA 1057 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 SR + + + + + + LL + + Sbjct: 1058 TASRPMPVGDAEVGVTASIGVSLYPQDNVDPDTLLRHADQAMYLAKDAGKNR-YQLFDPE 1116 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 + + L +R AL + L+ QP+ + E + ++ G++ P + Sbjct: 1117 NDRKAQEHRQFLELLRQALVHDEFALFYQPVVDLQSGEIISVEALIRWRHPRRGLLAPAE 1176 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 FLP ++ L A F L VL++ L ++ + S N+ LL+ + + ++ + Sbjct: 1177 FLPHLSGNELEAAFGLWVLDAALSQVSRWAEAGFHIKISTNVSTNYLLRTDFSQQLSTVL 1236 Query: 598 KRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 RY ++ P + LEI E + + E ++ +++ + G A+DDFGTG+A+ L+RL Sbjct: 1237 GRYPNVPPWHLELEIVESAS-GDVEQTIRVLQRCRELGVHFALDDFGTGHASLTHLRRLP 1295 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV D++ + D IV + +LA + +AE VET + ALL LG Y Sbjct: 1296 VDTLKIDNSFVHDMIGSQDDRRIVEGVIELASIFARKAIAEGVETMEHAALLRSLGCHYA 1355 Query: 717 QGYLIGRPQPLA 728 QG+ I RP Sbjct: 1356 QGFGIARPMEAD 1367 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 25/317 (7%), Positives = 71/317 (22%), Gaps = 10/317 (3%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L + L L+ ++ +PL + + F+ ++ + + Sbjct: 11 LLAVSSYALFALAWIFFSDQLLAGLDAS-RVVPLSIAKGVFFVLVTSILLLLALRAVPSR 69 Query: 76 LWNFHLSFLQTAVMLG----SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 L++L ++ A L ++ + + L ++ Sbjct: 70 EGGAQLAWLGNLANGMRSERWTNWLAYPAVLALVAGALALRQFLMGPELGAHPMLILFML 129 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 I C + L + + L++ L ++ Sbjct: 130 PIILGACMGGIGPGLLATVLSVLAVDLMVEPHLHAAQTPWHSKVQLLFLALNGLAVSLLC 189 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF--I 249 + L + + + LL F+ V Sbjct: 190 EMLRQALERVALHRALLDAVVSSTSDAVFVKDVQGRYLLVNQAALAFVGKTSGEVIGKDD 249 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 R + + + + + ++ + + L Sbjct: 250 RDVFDEETARELIIQDRLIMQSGRVQTHEEHLALQNGERMVFLVTKGPVYNHEGLLGGLF 309 Query: 307 YMVRIYHRSEWLNRRWH 323 + R R + + Sbjct: 310 GISRDITRQKQAENQLR 326 Score = 45.4 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 10/142 (7%), Positives = 26/142 (18%), Gaps = 7/142 (4%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 R++ + R D L + + + + G+ Sbjct: 561 GAAVRLVGNLSDITERKRADEDLRLVLNEAGDAIWVTDVDGYFIF---ANPAACRLTGHS 617 Query: 244 VPVFFI--IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + I L + ++ L S+ + Sbjct: 618 LDDLREMHIHDLVAPECLGLLAEHLAKINNGAFLRSEWKLRLKKSGTVSVDLTSGKMKD- 676 Query: 302 SVCLLYMVRIYHRSEWLNRRWH 323 + R + Sbjct: 677 -GRYIAFGRDLTEQHRAEQELR 697 Score = 44.2 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 8/154 (5%), Positives = 27/154 (17%), Gaps = 10/154 (6%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 + Y + I + + + + W + + + Sbjct: 432 AIVSLYGTMQDITERKRMAMQVKASESRLQLVAEATSDGFW-DWDLRSGKVYRSSRYYEV 490 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL-----NYNQNFLQGVETEYSLAF 293 + A+ + + E L Sbjct: 491 TGTQPEDDSGDFRFFRQMVHPADLPYVLQAIEAHRRGKTPRIEIDFRLARQDEGVRWLQA 550 Query: 294 ILAVL----ISFSVCLLYMVRIYHRSEWLNRRWH 323 + +V L+ + + + Sbjct: 551 RGRAVEWDERGAAVRLVGNLSDITERKRADEDLR 584 Score = 43.8 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 39/151 (25%), Gaps = 14/151 (9%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF--IA 240 + ++R I A+ R A ++ A SW S L+ + + + Sbjct: 308 LFGISRDITRQKQAENQLRDSEAMLQQAQQLAGIGSW----SWDLVDDRQSWSPEAYRLF 363 Query: 241 GYLVPVFFIIFTLGVGKL-RYPFLNLTWAVSTLCL----LNYNQNFLQGVETEYSLAFIL 295 G + + L+ AV L + L+ L Sbjct: 364 GLTEKSGPPGYPAMRRYFDADGWAQLSEAVERCKLVGMGYECDVELLRADGESRWLTMRG 423 Query: 296 AVLISFSVCLL---YMVRIYHRSEWLNRRWH 323 ++ ++ + + + Sbjct: 424 EARRDEEGAIVSLYGTMQDITERKRMAMQVK 454 Score = 43.1 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 12/148 (8%), Positives = 28/148 (18%), Gaps = 12/148 (8%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + R + H A+ R + W L + +E+ GY Sbjct: 679 YIAFGRDLTEQHRAEQELRDRERQLARVIAGSDQGFWDWNLETNRFQVSPRWESML--GY 736 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILA 296 I + + T + + Sbjct: 737 GPGEMHITADSWYEHVHPEDVERTRDSIQRNLSGEMKSHEVEIRCRTRGGDWRWILSRGR 796 Query: 297 VL----ISFSVCLLYMVRIYHRSEWLNR 320 V+ + + + + Sbjct: 797 VVERNDRGEPLSMSGTHTDITERKVFEQ 824 >UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E09_THICR Length = 665 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 89/424 (20%), Positives = 186/424 (43%), Gaps = 17/424 (4%) Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 + QA TD L+ L N L + + + +DN + ++ G + Sbjct: 232 ELYRQARTDNLSGLANRNHLNERINWLISEYSRTGQEFAVLFMDLDNFKTVNDMLGHEVG 291 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWN 429 + ++++ + ++++ + + ++ G E ++VL+ ++ L H++N + S + Sbjct: 292 DNLLKNVSTIIQEVLRDYDIIARVGGDEFVIVLNYYQSNFELTHVINRILDRISEVHMVD 351 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 + + + F + + + L+ ++ E + Q ++ Sbjct: 352 SHPVKVSASIGIVCFPKDGDNISTLMKNADIAMYEAKNSGKNR-FKFFTESLHKQVIGEI 410 Query: 490 LLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 L ++ AL + LY QP + G + ++ G++ P+ F+P + Sbjct: 411 QLEQDMQRALKNNEFELYFQPKICVNDGSVVGAEALVRWNDPKKGLVPPNDFIPAAEKTG 470 Query: 547 LSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L VL++ ++ T + S+NL P+ LL ++ L + + P Sbjct: 471 LMVPLGHWVLKTAIQQQVTWKEQGLADLQISINLSPVQLLDTLFDRKLQALINQSGVDPT 530 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + +E+TE Q N E +++++ + K G I++DDFGTGY++ LK+ D +KID Sbjct: 531 KLDIEMTESQFMENTEQNLHSLSTMRKQGINISLDDFGTGYSSLAYLKKFPIDTLKIDKT 590 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F+ D T A+ + +I +A +L+VVAE +E + Q L + G + QGY P Sbjct: 591 FIDDYAT-ESGAIFIETIVKIAHTLNLNVVAEGIEQEAQLNYLVQTGCETYQGYYCSAPL 649 Query: 726 PLAD 729 P+++ Sbjct: 650 PVSE 653 >UniRef50_Q2RWS9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWS9_RHORT Length = 1061 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 92/607 (15%), Positives = 196/607 (32%), Gaps = 44/607 (7%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYN--MLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 + + L A+L+ I ++ R+ Sbjct: 457 RAAMGNRPRLSVALSRLFGHADALLLPTNPRASVITFVDITERKASEAALRKLSRAVEQS 516 Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF--FIIFTLGVGKLRYPFLNLTWA 268 S + + + P V + + Sbjct: 517 P-----ASVIITDARGTIEYVNPQFEKSTGYRSWEVIGANPRILKSGHIAEATYAEMWKT 571 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 ++ + + T Y L+ + + LL + + R Q Sbjct: 572 LNEGREWRGELHNRRKDGTLYWEYASLSPVKDRRGRTTHLLAVKEDITARKETENRLIRQ 631 Query: 326 ALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN ++ + + +D+ + ++ G + + Sbjct: 632 ANFDELTDLPNRSLCYSRLKEAIVEAEATASIVGVLFIDLDHFKNVNDSLGHAVGDKLLT 691 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 ++ + L + + + L + G E L++L + + + + + Sbjct: 692 AVAQRLREVARPGDTLSRQGGDEFLMLLPDLNGSEAGHGVAQAILTALAPPFSIDGREIY 751 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 M F + + LL + A+ + + +++ + Sbjct: 752 MAASIGITFFPRDGRSAAELLRNADSAMYTAKESGRN-AICFFSPEMEIRAAQRLAIEGA 810 Query: 495 IRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL +L + QP+ + G + +L G ++P +F+ + + L Sbjct: 811 LRQALAHEELRVAYQPLVRTSDARPIGAEALLRWTSPTLGEVSPTEFIKVAEETGLIVPI 870 Query: 552 DLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL+ + A + G + +VN+ ++AG + KR+ Sbjct: 871 GAWVLDQAVAEAARLRAEGYGAFQIAVNVSVRQFRGGDLAGLVSDTLKRHDFPAA----- 925 Query: 611 ITEEQAFS-------NAESSMYN-IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + ++ ++ L G R+++DDFGTGY+ LK DI+K+ Sbjct: 926 ---GLELELTESLLLDVTPAITTTLQSLSALGVRLSLDDFGTGYSALSYLKTFPFDILKV 982 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F++DI + + R+I +A+ L+ + E VET++Q A +QG+L G Sbjct: 983 DRSFIRDISSAPDSGALARAIIAMARGLGLATIVEGVETEEQCAFARAEDCDIMQGFLFG 1042 Query: 723 RPQPLAD 729 + AD Sbjct: 1043 KAMTPAD 1049 >UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein (Fragment) n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHA2_9CELL Length = 721 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 91/562 (16%), Positives = 190/562 (33%), Gaps = 37/562 (6%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLL-------------CTPYENDFIAGYLVPVFF 248 R + E+R + A + L Y + I G Sbjct: 145 RAVEALRVSEERYALAAEAANDGMWDWDLETGAVYYSARWKALLGYRDHEIEGTSHEWLS 204 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISFSVCL 305 + G + + + + + + + L Sbjct: 205 RVHPADRGAVDRALAHHLD--GRDPAMEVEYRLRTADGSYRWMITSALSVRDADGTATRL 262 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLR 356 + + + L + A D LT LPN + Q + + L Sbjct: 263 VGSMTDVTERKQLEDQLRHDAHYDLLTGLPNRALFLERLNQSILRTRRHPDYRFAVIFLD 322 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + + + L ++ + + + G E L++ + L Sbjct: 323 LDGFKVVNDSLGHQVGDELLIEVAARLSSEVRATDTVSRFGGDEFALLVDDVKDVAGLPD 382 Query: 417 MVNILNSRQIHW---NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +V L S + + A +T L ++ A Sbjct: 383 VVRRLLSVVSVPVVLEDRTRTVSAAAGIAVSASGYDTADEYLRDADTAMYRAKAEGPGAV 442 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + + + + ++ + + + + + + L+ QPI ++ G + ++ Sbjct: 443 V-LFDTAMHARAMARLQMESALDQGIAEDEFELFYQPIVRMDTRQIVGMEALIRWRHPQR 501 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQK 587 G++ P+ FLP+ + + + + G SVNL Sbjct: 502 GLVAPNDFLPVAEATGHTRPIGQWTIGEACRQIREWLDVVPGFEACTVSVNLSNRQFWDP 561 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + RY + +++ E+TE N + ++ + QL + G + +DDFGTG++ Sbjct: 562 DLRPTLRSALDRYAVPTSSIVFEVTEGVIMDNQDVAVSFLHQLREEGVELHVDDFGTGHS 621 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L L +KID FV+ + T+ +V + + L V+AE +ET+++ A Sbjct: 622 SLSSLHELPVGALKIDRSFVQRMQTSPRSHELVGLMVTMGTRFGLDVIAEGIETEEEAAA 681 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L +LG Y QGYL RP P + Sbjct: 682 LSRLGCPYAQGYLFSRPLPATE 703 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 101/446 (22%), Positives = 181/446 (40%), Gaps = 18/446 (4%) Query: 300 SFSVCLLYMVRIY-HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 L + + A D LT L N L ++ + + Sbjct: 215 DELGRLALSFHNLWQARAAAESQLNQLAYFDTLTGLANRSLLLKSLNETLKESQSEQYPG 274 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +D + ++ G + + +R+I + L +Q E ++ G E +++ Sbjct: 275 VLFYLDLDRFKTINDSLGHTIGDNLMRTIAKRLEAWLQPGEIAARIGGDEFAILIPKLNK 334 Query: 411 EGRLQHMVN--ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 E L S ++ L F + +L Q ++ Sbjct: 335 EDAANKAKQLLTLISNPYSIDDHQLYCTVSIGISTFADKGISSIDVLRQADTALYRAKVA 394 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARL 526 E + Q + + + AL +G L LY QP N + G + ++ Sbjct: 395 GRNK-YMFYEPEMQAQVESFLEIEKGLHEALHKGQLELYYQPQVNAQQQIIGVEALIRWN 453 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP----RFSVNLMPL 582 + G++ P F+P+ + + ++E A ++ P R ++N+ PL Sbjct: 454 HPEKGVLPPGVFMPIAEETGQILQIGDWIIEQACFQYAQWKKEQVLPETFHRLAINISPL 513 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + I K+ +I+ + + LEITE N ES++ + +L + +I+IDDF Sbjct: 514 QFSKNAFVEHITHALKQANITGEHIELEITESLLLENVESAINKMAELKELDLKISIDDF 573 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK L D++KID FV + + D IV +I +A+ SL V+AE VET+ Sbjct: 574 GTGYSSLRYLKHLAVDVLKIDRSFVTQLHLDQSDQAIVSTIIMIAERLSLEVIAEGVETE 633 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ L +LG + QGYL G+P P+ Sbjct: 634 EEFNTLVELGCEQFQGYLFGKPLPVE 659 >UniRef50_A5EN18 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=3 Tax=Bradyrhizobium RepID=A5EN18_BRASB Length = 833 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 120/561 (21%), Positives = 221/561 (39%), Gaps = 26/561 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 MI P +A+ R +A + + L + + +A L+P Sbjct: 228 MIGIPVYAKGTSRTTVADRRRNLTGFIIGVFDLPML-LQAVRTNNPNSSALAINLLPPER 286 Query: 249 IIFTLGVGKLRYPFLNLTWAVS-TLCLLNYNQNFLQGVETE-----YSLAFILAVLIS-- 300 +I GV R+P W+ + + ++ +LAF A + + Sbjct: 287 VINASGVDPQRWPADPNIWSTTLRIGDADWVFQAAPAGGALMTTHNRALAFYAAGIATTL 346 Query: 301 -FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-----EAGKSFCC 354 F+V L+ R + NRR A TD LT L N + E+ + Sbjct: 347 FFAVYLVLSSRNARQLALANRRVLELAQTDALTGLANRAFFLEEMERINDEKGGRFTVFL 406 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR- 413 L +D + ++ G + + + L ++E + L +L G E L+ +G + Sbjct: 407 LDLDRFKNVNDSLGHGAGDELLVQVAQRLRSQLREEDVLARLGGDEFALIQAGFSDQRAS 466 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + +++G + + LL + +S + Sbjct: 467 ATELAQRITRLIAEPFQISGQRVEIGTSIGISLAPQHGRDQEHLLKKADLALYRSKSAGR 526 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLK 527 ++++S + + L +R A+ Q ++ QP + E G + ++ Sbjct: 527 -SCYTMYDDVMSAELEARNTLEGDLRDAIAQCQFEVHYQPFYDAETRQRRGVEALVRWRH 585 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G++ PDKF+PL L ++ + P + +VNL P+ Q Sbjct: 586 PVKGLVPPDKFIPLAEATGLIVPLGEWIIGRACDDATSWPD---DIKVAVNLSPVQFKQA 642 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I R + P+ + +EITE A + I++L G +A+DDFGTGY+ Sbjct: 643 ELFDVIQSALARSGLDPKRLEIEITESVLLERAAENESFIDKLKGIGISLALDDFGTGYS 702 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L + IKID F+ ++ A ++ S+ LA+ + + AE VET++Q Sbjct: 703 SLRSLTAFPFNKIKIDKSFIANLSVREESAAVISSVVTLARGLGIQITAEGVETEEQLRH 762 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L LGV + QGYL+GRP P+ Sbjct: 763 LCTLGVNFAQGYLLGRPMPVE 783 >UniRef50_B3PCW8 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCW8_CELJU Length = 850 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 101/497 (20%), Positives = 197/497 (39%), Gaps = 18/497 (3%) Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + G + + + + +G + + ++ + + + Sbjct: 338 LGQPLSESGSTNYLFDLDTFIANGYQMVDHDITRQDERGKKFYFQISCTGIIEDGYLRRI 397 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRI 357 + + + Q+L D LT LPN EQ ++ + + + Sbjct: 398 WGTTKDVTTRKRYEDKLRHQSLHDSLTGLPNREKLYQDMASCFEQRTAEQIS-ALMLIDL 456 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN-EKLYQLPGSELLLVLSGPETEGRLQH 416 D + ++ G + ++ I L M E + +L G E + L + + Sbjct: 457 DRFKEINDTLGHNVGDRLLQMIGPRLAAEMAEVPGTVARLGGDEFAVFLPRIRSTHQAVV 516 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + +++ M + L+ + + +L Sbjct: 517 FGHRILDALAQEYDLEVFCTQMSASIGIAIAPYQAQDHHALMRYADIAMYYAKSQ--MLG 574 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 L + K++ +++ + A+ + L LY QP G++ ++ + + Sbjct: 575 LSIYSPDYDPHSPKRLAMMSELGRAIRENQLCLYYQPKVVLDECRCYGFEALIRWIHPEL 634 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G + PD F+P+ +L VLE+ ++ +VNL L+ +NI Sbjct: 635 GFVPPDDFIPIAEFTSLIHPLTAWVLENSIEQCRHWQLQGLNLSVAVNLSARNLMDENIP 694 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + RL +Y + + LEITE S+ ++ ++ LH+ G ++IDDFGTGY++ Sbjct: 695 KLVERLLNKYQLPAARLELEITESSIMSDPNRALRILQHLHELGVHLSIDDFGTGYSSLA 754 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL +KID FV++++ + D +IV S LA L+VVAE VE ++ LH Sbjct: 755 YLKRLPVQTLKIDNSFVRNMLGDLQDELIVNSTIHLAHNLGLTVVAEGVENEELMKRLHD 814 Query: 711 LGVQYLQGYLIGRPQPL 727 +G +QGY IGRP + Sbjct: 815 MGCDEVQGYFIGRPMTV 831 >UniRef50_C4ZM14 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM14_THASP Length = 712 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 111/579 (19%), Positives = 201/579 (34%), Gaps = 25/579 (4%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-LLC 231 + R + A+ R A + L ++ L +L Sbjct: 111 LARLAPALARGLAEARGRRARRHAEDGLRAREAHLRIWGEVVEGLHEGIVVTNLAGDILD 170 Query: 232 TPYENDFIAGYLVPV---FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + I G+ + + A+ T + Sbjct: 171 CNPAFERITGHARAEVLGLNPRVLKSGRHDAAFYAGMWDALVTRGSWVGEVWNRRKSGEI 230 Query: 289 YSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 Y L + + M R + R DPLT N + + + Sbjct: 231 YPERLALRAVRGADGLPTHYVGMFSDISREKQDQARLDYLTHHDPLTGFANRQLFMERLQ 290 Query: 346 QE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 Q + L +D ++ G ++ + + ++ L +L Sbjct: 291 QAVERAAAGEGKAAVLLLDLDRFRRVNESLGQDAGDRLLQVMAERIAGCLKRRSSLARLG 350 Query: 398 GSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 E L++++ L + + +R + N L M + + L Sbjct: 351 SDEFLVLITEFTDADALAALARRILDEIARPVTVNGQLLHMSASLGISVHPQDGADAEHL 410 Query: 455 LGQLSWLAEQSC-AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 L ++ H L + + + + + + +R AL +G+L LY QPI Sbjct: 411 LQAAEAA--RAQIRHGLGNRLHFFTAGMDTRARRWIEVESELRHALARGELQLYYQPIVC 468 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + + +L G ++P +F+P+ + L LE+ + + Sbjct: 469 VRDGRVRTVEALLRWNSPALGWVSPAEFIPVAEESELIVAIGDWALETACRQVRHWQDTG 528 Query: 571 KG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 R +VN+ L + R+ + +R I P + LE+TE S++E +E Sbjct: 529 LPAVRVAVNVSAHQLAGGRLPERVREVLERTGIDPGQLELELTESAMMSDSEHGARQVEA 588 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 + + G +A+DDFGTGY++ L R +KID FV + + ++IV + LA+ Sbjct: 589 ISRMGVSVALDDFGTGYSSLAYLSRFALTKLKIDRSFVDGLSRDPKSSIIVDATLGLARG 648 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE VET++Q+ALL G LQGYL P A Sbjct: 649 LGLRVVAEGVETEEQRALLAAAGCDALQGYLFSPPVAPA 687 >UniRef50_C7RC12 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RC12_KANKD Length = 629 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 95/558 (17%), Positives = 198/558 (35%), Gaps = 22/558 (3%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKR-AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF- 247 + + + I + + + + T + + + Sbjct: 64 LTELEEVKSELEQSIRKLRVTMDAGYDGIVQVNSDGIPTAYNDTVLKMLNLTARELQSLS 123 Query: 248 ---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 K +N + N + L + Sbjct: 124 YRKICQHLFKNIKNPEVVINQLRKALMKQDDSGNILVEHNDGRFFECKAKALELDGQTQG 183 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLR 356 L++ ++ + R A D LT LPN + E + L Sbjct: 184 LVWTIKDITDLKLKEREARYLAYHDELTNLPNRTLFFERLEHALDLAKRKEELLAVIFLD 243 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ +G ++ + + +L ++E++ +L G E +++L E + + Sbjct: 244 LDEFKTVNDTFGHAQGDLLLQKVAKRILVALREHDTFARLGGDEFVIMLEDVEDREAIVN 303 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +++ + I + + + + + Q LL + S H Sbjct: 304 VLDRVKHALDTPITLGTNQVYITPSLGVAIYPEDGDDAQDLLKKADMAMYNSKKHGKN-T 362 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + +T ++ + +R AL + L QP +K G + ++ + Sbjct: 363 YSFYSNHLEQYSTYRLSMRTALRRALRNSEFFLEYQPKFSLSDKRMMGVEALIRWNNKE- 421 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNI 589 +M+P++FL + V+E + +A D K S+N+ P + Sbjct: 422 TLMSPNEFLNEAESNGMIIPISQWVIEQACRDIAHWKGDSKACCPVSINISPRYFQHGCL 481 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + R+ I + +EITE+ + E+++ + +L+ G +I+IDDFGTGY+++ Sbjct: 482 VDDLKACVNRFKIDASCIEIEITEQAFIPDIENAIKRMHELNDIGVKISIDDFGTGYSSF 541 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L +L +KID F++ + + + +V I +A LSVVAE VE + LL Sbjct: 542 NYLMKLPVQQLKIDTSFIRSLEESEIQHSLVAEIIKIAHLFGLSVVAEGVEHEHIADLLM 601 Query: 710 KLGVQYLQGYLIGRPQPL 727 QG+ +G P P Sbjct: 602 SYDCDLAQGFWLGSPIPA 619 >UniRef50_C9YG65 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YG65_9BURK Length = 823 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 109/585 (18%), Positives = 200/585 (34%), Gaps = 26/585 (4%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + + L L+ + + ++ R +A A + L Sbjct: 225 LPWVGGLLILALMAVIYAGLHAQKLMKQILEDSRQRVSLAERNRSVLNAVDDAILGIDLN 284 Query: 226 LLLLLCTPYENDFIAGYLVPVF-FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 + P ++ + + I L + P L + L + + Sbjct: 285 GTVTFANPSASNLLLLTSDDILTLEIKDLLPLEYSGPLLASLNSGQRWSSL--SSTLIDS 342 Query: 285 VETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + V+ ++ + R ++ + +L+A D LT PN Sbjct: 343 NGRRFPAEVSCTVVRYNDKIRGGVIGI-RDISERKFFEDQLYLKANFDTLTGAPNRNYFA 401 Query: 342 QAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + S + I+ + ++ G ++ L+ + + Sbjct: 402 EYVGNCLMVMGSDQSGSLMLVDIEGFKKINDSMGHDTGDLLLKYAYERLVATVGPANMVA 461 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 + E + L G + + + + S + + G F + T Sbjct: 462 RFGNDEFAVCLGGCKNQAEAAEIAQKVLNAFSESFNVLGHVVWAGASIGISVFPTDGSTP 521 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL + ++ + + T + L +R AL Q +L L+ QPI Sbjct: 522 NDLLRRAEMAMYKAKSLGKDE-FSFYSAELDVDTQGRRTLEVDLRRALAQNELELFYQPI 580 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + +L G+++PD F+PL + L + VLE + LA Sbjct: 581 VTMGSAAVSHVEALLRWRDPQKGLISPDTFIPLAEETGLIVEMGVWVLEESCRQLAAWHK 640 Query: 569 DKKGPRF--SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 ++N+ + + I RY + V EITE + + Sbjct: 641 AGLDAHVGVAINVSGRQVPRGLSLACITETLSRYGLDGSQVSFEITESVLLDGSGTVAEW 700 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV---TNTLDAMIVRSI 683 + + G R+ IDDFGTGY++ LK LQA +KID FV + N D +V +I Sbjct: 701 LSGVRNLGIRLMIDDFGTGYSSLSYLKHLQAAALKIDKSFVWGVAGESENKEDQSLVLAI 760 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A + L V+AE VET +Q L + + QGYL GRP P Sbjct: 761 ISMAHSLGLPVIAEGVETNEQADWLLRNQCDFAQGYLYGRPLPAE 805 >UniRef50_C1CZG3 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZG3_DEIDV Length = 805 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 96/552 (17%), Positives = 200/552 (36%), Gaps = 17/552 (3%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + + L ++ L + I GYL + Sbjct: 233 VGNQEHVVNLRSAYGRALHALDRHDEAAFQLETALGVARERELRALERNILGYLSELCAS 292 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV 309 +L Y + + + ++ + + + + + + Sbjct: 293 REDW---RLAYAYSRQHQELQRVLHTQDSERRSRVLSVQMQVEMLKREAERERQRNAELS 349 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALE-QAPEQ-----EAGKSFCCLRIDNLEFM 363 + E + +A D LT L N + +A + +D + + Sbjct: 350 QANTALEQAQQHLAYRATHDALTGLHNRAHFQAEAERHLADLSGGELGMLFIDLDRFKQV 409 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + + + L +++ + + +L G E L+L G + + + + Sbjct: 410 NDTLGHDVGDELLDQVGQRLRNVVRTGDLVARLGGDEFTLLLPGLRDASDAERVARKVLA 469 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + L + + + + ++ A+ + Sbjct: 470 SLAQPFQVGGHKLHITGSIGVAVAPQDGMDITTMQKHADVAMYRAKHDGKN-AVRTYSAG 528 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 + +T ++ L +R AL G+ +L+ Q + GY+ ++ G++ P + Sbjct: 529 MGDETAARMDLERDLREALRNGEFVLHYQGQFDVASGALSGYEALVRWQHPVHGMIAPGR 588 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+P+ L VL + D++G SVN+ P+ + A + Sbjct: 589 FIPVAEDSGLIGPLGTWVLREACRQARAWRADERGLTMSVNVSPVQFDTADFARLVQEAL 648 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + I P+ ++LE+TE + S+ +++L G RIA+DDFGTG + L+ + Sbjct: 649 EEAGIRPECLMLELTESTVLRDVASATQQLQRLRALGVRIALDDFGTGQSALSLLRHIPI 708 Query: 658 DIIKIDGVFVKDI-VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F+ T+ + +R + L +A+ L+VVAE VE + QALL ++G Sbjct: 709 DQLKIDRSFLPGPDDTDESAQVFLRLLVMLGQARRLNVVAEGVENAEHQALLREMGCPTA 768 Query: 717 QGYLIGRPQPLA 728 QG+ + RP P Sbjct: 769 QGFYLSRPLPAH 780 >UniRef50_Q2RVK9 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RVK9_RHORT Length = 917 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 109/606 (17%), Positives = 208/606 (34%), Gaps = 34/606 (5%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR---MIVSPHFAQILWRRDIAPSLGKEKR 213 + + I + L L +L+++ R + + + + Sbjct: 290 WYETRNISLLFVAFFLSLFYLSLFILYFFWRRQKEDATRLRESNEQTQTVLRTLRESDNA 349 Query: 214 AFTLSWLAALSVLLLLLCTP---YENDFIAGYLVPVFFIIFTLGVGKLRYPFLN------ 264 + LS +L L + A + + L YP Sbjct: 350 LAAACEVGGLSTFILDLSANLWMRSPEQEAIFGLDGRHPRTRDAWHALIYPEDRGGVLDY 409 Query: 265 -LTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLN 319 + ++ + + + L+ ++ + Sbjct: 410 FAERDALDTGEFDIQYRIIRPSDGAVRWIHGAGKLERAEDLSVRRLVGAIKDVTEIKEDL 469 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 R A D LT LPN L ++ + C L +D+ + ++ +G + Sbjct: 470 DRTEFLAYHDSLTNLPNRLLLADRMGQALALAVRRQDLLAVCYLDLDSFKPINDTWGHSV 529 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 + + R L + + + +L G E +++L G + E ++ +V + + Sbjct: 530 GDALLIEVARRLQQNARAEDTVARLGGDEFVVLLCGFKAEAEVERVVRRMMDSIATPYSV 589 Query: 429 NNTGLDMGYGAAWGRFDGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + F + E L+ ++ + + + Sbjct: 590 GGRQVTLTVSMGITTFPRDAEQEADALIRHADQAMYEAKRQGRNR-IHYFDAEKDRLHKE 648 Query: 488 QVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + N + AL+ + L+ QP + + G + ++ + G++ P FLP I Sbjct: 649 RQTYYNRMVAALEANEFQLHYQPTIDLVSGVFSGVEALIRWRHPERGLLLPGAFLPDIED 708 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HIS 603 +L+ +L L+ VNL L Q + R + + + Sbjct: 709 TDLTVPLGEWILREALRQKERWQDMGLSLTVGVNLFGYHLQQDSFVARFAAILAEFPAVH 768 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ V LEI E A + + + +FG A+DDFGTGY++ +RL +KID Sbjct: 769 PEEVTLEIVETTAMRDLAAISEKMWDCKRFGVDFALDDFGTGYSSLTYFRRLPVTHLKID 828 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV DI+ N D +V+SI ++ A VVAE ET A L + G + QG+ I R Sbjct: 829 RSFVTDILENAQDQAMVQSIVAMSHALGRKVVAEGAETLAHCAALGRYGCDFAQGFGIAR 888 Query: 724 PQPLAD 729 P P D Sbjct: 889 PMPGED 894 >UniRef50_A7BRN3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BRN3_9GAMM Length = 581 Score = 591 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 99/498 (19%), Positives = 186/498 (37%), Gaps = 35/498 (7%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEW 317 + + + L F L + ++ +L R Sbjct: 65 QLKMAIASAGQGNFAHCEVKIQKHNGQLTILDFSLTPVKNVHGKTIWILAEGRDLSEHRV 124 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPE---------QEAGKSFCCLRIDNLEFMSRHYG 368 L +R L D LT LPN + + Q+ + L +D + + G Sbjct: 125 LEQRLTDMNLHDQLTGLPNRQLFMDYLDKALMRTKQHQKTTFAVLFLDLDRFKVTNISLG 184 Query: 369 LMMRVHCIRSICRTLLPLMQ--------------ENEKLYQLPGSELLLVLSGPETEGRL 414 M + + + L + + L + G E L++L Sbjct: 185 HDMGDWLLMEVAQRLQNCLNNFRGKSFCFTKTFASKDILARAGGDEFLILLENISDITEA 244 Query: 415 QHMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + N + ++ + + + +Q+ LL ++ A Sbjct: 245 NRLAVTINKVLAKPFLIDRYKIMTSASIGI-VYRTSQQEGMELLRDADAAMYRAKALGK- 302 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKY 528 + + ++ + + A+ + +L+ QP + + G + ++ Sbjct: 303 SGYAIFSPGMREEAISRLQIEMDLHQAIVNKNFVLFYQPQTELYSNQLVGIESLIRFHHP 362 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + G++ P +FLP++ + +L++ + L T R +VNL P K Sbjct: 363 ENGLILPMEFLPVLEDTGIIIPIGEWILQTACQQLKTWLEAGLLIERVAVNLSPYQFRSK 422 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ R+ + I+P+++ LEITE + +S++ ++ G R+ IDDFG GYA Sbjct: 423 NLLKRVADALENSGIAPESLELEITESLLLKDIDSAIKTLKSFKDMGIRVIIDDFGMGYA 482 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + + +KR AD IKID F+ I+++ DA I + D+A A L+VVAE VET +Q+ Sbjct: 483 SLDYIKRFPADGIKIDNSFINGIISSPEDATITVATIDMAHALGLTVVAEGVETVEQRDF 542 Query: 708 LHKLGVQYLQGYLIGRPQ 725 L G QG P Sbjct: 543 LRDHGCDLAQGLFYAAPM 560 >UniRef50_C6DFX5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=Enterobacteriaceae RepID=C6DFX5_PECCP Length = 722 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 108/563 (19%), Positives = 209/563 (37%), Gaps = 21/563 (3%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAG 241 + + S ++ RR + R ++ + ++L ++ + + Sbjct: 148 LQDLASLVMDKLEMRRLELARRASQVRFENIANTSPDTILCVNEKGMITFWNTAAEHMLE 207 Query: 242 YLVPVF--FIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y I T+ +L S + + N + + +++ Sbjct: 208 YTDEEIIGRSINTIVPDAFVVQLNHLVADRDSLMKGVTLELNVQAKSGSLVPVELSVSMW 267 Query: 299 ISFS-VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL----EQAPEQEAGKSFC 353 + ++R R L A DPLT L N L E A + E Sbjct: 268 EDNDNISYGAILRDITERRRNEERLFLLAHLDPLTGLANRTLLTSNLETALKNEPAVCIM 327 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + + + + + ++ + + ++ G E L+ G + Sbjct: 328 MVDLDGFKDVNDSLGHSSGDNILVHVAKKIKATVRSGDVVARMGGDEFALLFPGLNDKKV 387 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + S+ + ++ +++ + T+Q LL Q+ + Sbjct: 388 AGKIAEQIIHEISQAMIIDDHQINISASIGAVLYPEYGLTVQDLLTSADLALYQAKSEGR 447 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + A +Q + ++ QP E G + +L Sbjct: 448 N-CYRFFTRELLEVFQAKHAFQLEFVRAYEQHEFEMFYQPQVKLATNEIVGAEALLRWRH 506 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQ 586 + G+++P FL + + R ++E+ + A + R S+NL Sbjct: 507 PERGLLSPAAFLTALENGPWAERVGDWIVETACRQAAEWCRESDRYFRISINLFSAQFRT 566 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +A +I+ + R + P ++ LEITE E+ + ++ L G IA DD+GTGY Sbjct: 567 GMLAQKIMDILARTGLQPSSLELEITENIILRYDENMLQPLKALRDAGIGIAFDDYGTGY 626 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 A+ LK +KID FV+ + + DA IVR+I L K+ L V+AE VET +Q Sbjct: 627 ASLSMLKNYPVTRLKIDQTFVRTMCESPPDAAIVRAILYLGKSFGLGVIAEGVETLEQSE 686 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L G + QGYL G P P + Sbjct: 687 RLRGKGCEEAQGYLFGHPMPAEE 709 >UniRef50_A1WTF5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTF5_HALHL Length = 823 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 106/613 (17%), Positives = 210/613 (34%), Gaps = 23/613 (3%) Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + + LV + + L + + LF + R++V Sbjct: 182 AGGQVVSMLALVRDLTELNRAHQRVSQLVRLYAALSATSQLIVRLPERSALFQEVCRIVV 241 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-LLLLCTPYENDFIAGYLVPVFFII 250 ++ W + + A ++ L + + + G + Sbjct: 242 RHTDLRLAWIGLVDAETRQVVPQAWEGDQAGVAYLETIRVSADPASAEGRGPVGRAINED 301 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF--LQGVETEYSLAFILAVLISFSVC---- 304 + W + L+ + A F Sbjct: 302 RPVVFEDFLGAREAAPWRAAATQAGFGAVAAFPLRHGGEPVGALAVYAPEAGFFSEEIRS 361 Query: 305 -LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE-------AGKSFCCLR 356 L+ + + + + A D T LPN L Q + + Sbjct: 362 LLVELAEDVGFALDHSAQLQYLAEHDLTTGLPNRSWLLGRVAQGIRRASDSERFAVAFVD 421 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G +R + L +++ +++ + G E L++L E+ ++ Sbjct: 422 LDRFKVVNDSLGHDAGDQLLRQVAERLGEMVRSGDEVGRHGGDEFLMLLHDLESTEQVAQ 481 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +V + + + + + + + G+ ++ ++ Sbjct: 482 LVQRVLNRFRKPLRIDGREVAVTPSVGLSVYPGDAADADGMVRAADTAMHRAKDEGGNR- 540 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 E ++ + ++V L +R A + +L L+ QP + G + +L D Sbjct: 541 YRFFTEEMNREVRQRVELEAMLRNAEQRNELELWYQPQVALSTGQVVGVEALLRWHHPDR 600 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G ++P +F+P+ + L V+ A ++NL L + Sbjct: 601 GWISPGEFIPVAEESGLIGAIGEWVIGRACDQAAEWRGRGVLQVPVAINLSAAQLRGTGL 660 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I R R + +A+ LE+TE F + + I +L G ++A+DDFGTGY+N Sbjct: 661 PAVIQRALGRRSLPAEALQLEMTESLFFEDDVNVRTAIAELQSRGLQLAVDDFGTGYSNL 720 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL IKID F+ + D +I R+I +A+ L +AE VE +Q LL Sbjct: 721 GYLKRLPLAKIKIDQSFIHGVPEEPEDCVITRAIIHMAQGLGLRAIAEGVERPEQLELLR 780 Query: 710 KLGVQYLQGYLIG 722 +LG +QGYL Sbjct: 781 QLGCDEVQGYLFS 793 >UniRef50_Q31DJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DJ5_THICR Length = 963 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 90/548 (16%), Positives = 193/548 (35%), Gaps = 27/548 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGV 255 S + ++ A +L+ + + + I GY Sbjct: 403 RQESERFQMLTRSVFDNAGEGILVTDIHNRFVVVNKKFEEITGYSQEEVLGKNPSILSSG 462 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIY 312 + + + +S + T Y + + + ++ Sbjct: 463 QQSTLFYQAMWQELSEKDTWQGEIWNRKKDGTMYPEWLTINAVKDKQGRLLHYVGLMNDL 522 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMS 364 + + + + D LT LPN + +Q + + I + ++ Sbjct: 523 SQQKATEQEITRLSFYDILTGLPNISLFKNRLQQSIQMSVHEANQVALLIVDIARFKMIN 582 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G ++ + + L L+ + + +L L+++ + + + H + Sbjct: 583 DAIGYEHGDQLLKGVAQRLTQLLDAEDSVARLGADNFLILMESFQNKQDVSHFAEEIMNA 642 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 S + + +T L+ ++ + Sbjct: 643 FSLPFEVEGHEHVLDIKIGVALSSIDGDTALDLMKSADEALFEAKKL-PHSGYVYHSSEL 701 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 + T++ +R A+D +L+ Y QP + G + ++ + + G+++P KF Sbjct: 702 AATTSEYFFYEKALRQAIDNQELVAYYQPQIVLETNQVVGAEALVRWIHPEMGVISPAKF 761 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLF 597 + + L ++L + R SVN+ + L+ + ++ Sbjct: 762 IGIAESTGLIIPLGREILLQACQQWLAWQQQGLTLERISVNVSTVQLMHSGFVQSVAQVL 821 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + P+ + LE+TE N + + + L G +++DDFGTG+++ LK+L Sbjct: 822 EETGLDPKHLELEVTESFLLQNEQEGIAVLHALKALGLSLSMDDFGTGFSSLSYLKKLPL 881 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID F++ + + D IV +I + A + V+AE VET+ Q LHK G Q Q Sbjct: 882 DQLKIDQSFIRSLPHDKEDLAIVDAIIAVGLAVGVEVIAEGVETEAQMEYLHKKGCQLGQ 941 Query: 718 GYLIGRPQ 725 GY RP Sbjct: 942 GYGFSRPI 949 >UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT Length = 595 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 85/434 (19%), Positives = 173/434 (39%), Gaps = 19/434 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMS 364 + + + A D LT L N + E++ + + +D + ++ Sbjct: 154 DLKQIQEKLSFHARQDTLTHLVNRSVFLERIDLALKRFHEEEDYLFAVFVIDLDRFKMIN 213 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + + R L L+ + + + ++ G E ++L + + Sbjct: 214 DSDGHQVGDLLLVEVSRILESLVSQADTVARVGGDEFAILLDPIRDVNEALKLAQNIKEA 273 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + + + + +L ++ + + + Sbjct: 274 LTTSFFIQGRQVFISSSIGLTFSESSYNSALEILRDADIAMGKAKQKGRGK-YEIFNQEM 332 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 Q + L +R +++ + +Y QPI N + G++ ++ D G ++P +F Sbjct: 333 HTQALNLLTLETDLRYGIEKQEFEVYYQPIMNLNPIKLVGFEALIRWQHPDKGFISPGEF 392 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIR 595 +P+ L VLE + + + T + + +VNL I I Sbjct: 393 IPVAENTGLIIPIGKIVLEKVCQQIQTWKKKFQQITILKIAVNLSSKQFKNAYILQEIDE 452 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + +R ++ + LEITE +++ ++ ++QL + I +DDFGTGY++ L R Sbjct: 453 VMERTGLTSNNLKLEITETSLIDHSQETIKLLKQLKQRNLEICLDDFGTGYSSLSYLHRF 512 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID F+ I + I++SI LA ++VVAE +ET++Q L KL + Sbjct: 513 PVDTLKIDRSFINCIGQPEENLEIIQSIIHLAHNLGMNVVAEGIETEEQLIYLQKLNCDF 572 Query: 716 LQGYLIGRPQPLAD 729 QGYL RP + Sbjct: 573 GQGYLFNRPLTAQE 586 >UniRef50_A1VFP9 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=5 Tax=Desulfovibrio vulgaris RepID=A1VFP9_DESVV Length = 951 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 113/642 (17%), Positives = 212/642 (33%), Gaps = 28/642 (4%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 R + LF L ++ + + V + ++ D + + L Sbjct: 290 REASEQGHKALMLFSLVILVGTALVAATAQVLFQKHVGRRAASLAADIERVRISGFRSPL 349 Query: 173 FT-AVLIYNMLFYYLTRMIVSPHFA-------QILWRRDIAPSLGKEKRAFTLSWLAALS 224 + + + R+I A + +R + S +A Sbjct: 350 PADGDDEIAAIGHAINRLIRDREQAAHTLQENEAFFRLLYEQAPDAMLLLLDESIASAND 409 Query: 225 VLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 LL D ++ L+ F G+ + F + L + F++ Sbjct: 410 AAARLLGVADRKDLLSHPLIEFFPPAQEGGIPSV-EGFARQVENTTPLGNRRFEWIFMRS 468 Query: 285 VETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 +E L+ ++ +L R + + A D LT L N Sbjct: 469 GGSEVPCEVTLSPVMQRGRRMLHLTARDISERKRNEAQITHLAFHDSLTGLANRVLFLDR 528 Query: 344 PEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + +D + ++ G + I + ++E + + Sbjct: 529 LAHAIATCRRAPDRNFAVLFIDLDRFKVINDSLGHAAGDGLLSIIASAIAANIRETDTVA 588 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E +++ P + M + + + L + + Sbjct: 589 RISGDEFTVLVHEPPSPRFAIKMARRILERIKQPLTIEGFELVISASMGIVIGNSGYTDP 648 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 +L ++ L + Q + L N +R A+D GDL + QPI Sbjct: 649 HQVLRDADIAMYKAKRAGKDK-LRVFGSRMHEQALHAMRLENDLRQAIDNGDLSCHYQPI 707 Query: 512 RNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 N E EG++ + G + P F+P+ +L + A+ Sbjct: 708 VNLESGALEGFEALARWQHPTLGNIPPSTFIPIAEDTGRIIPLGRAMLHKACAFAASIRG 767 Query: 569 DKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 P VNL P L + + + + P+ ++LEITE N + Sbjct: 768 TLPQGDPVIHVNLSPRQFLSRQLLREVEAALDATGLPPELLVLEITESLLMENPRVAKSI 827 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L + G R+++DDFGTGY++ L+ D +KID F++ + IVR+I L Sbjct: 828 MAGLKEIGVRLSLDDFGTGYSSLGSLQDYPLDSVKIDRSFIRAMNDGRDAEHIVRAILKL 887 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L + E VET Q A L G +QG+L +P P Sbjct: 888 VSHLRLEAICEGVETTMQAANLMAFGATRMQGFLFAKPMPSE 929 >UniRef50_C8X1L9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1L9_DESRD Length = 936 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 103/552 (18%), Positives = 200/552 (36%), Gaps = 31/552 (5%) Query: 207 SLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLG---VGKL 258 E R L A + L+ +C + GY P F G Sbjct: 342 LEKSEARYRNLFANALEGMYLIGTDDSVICVNQAFADLLGYASPKDFETSNRGKKFSRIY 401 Query: 259 RYPFLNLTWAVSTLCLL---NYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIY 312 P +N + + + ++ ++ +L + Sbjct: 402 ETPTVNKNKFNALWTKGKIMHLETQVRRKNGELIWISENTKIVKDDHKNILYLQGTIIDI 461 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFM 363 + R QAL D T LPN + E+ +D + Sbjct: 462 TERKKSEERLLHQALYDHRTNLPNRSYFVEKIEKGLKRVGQEPGFSFGLLYFDLDGFGTI 521 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + +G + + + + + E + L + E ++ T ++Q + + Sbjct: 522 NDSFGYFVGDRLLLEVSHRIRTAIDETDTLARFSSDEFCVMSEN-RTSAQIQDLAENIRQ 580 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + ++ + +L + Q+ Sbjct: 581 KLEQVFFLDGQEITLTTSIGILEYNVTYTRAEDMLRDIELAMLQAKKRGKNR-WVIFSSD 639 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + + +++ L+ +R ALD+ +L+L QPI + E + ++ + G ++P K Sbjct: 640 MYQRKSERTLMEKDLRRALDREELVLNYQPIIKLDSGELNSLEALIRWKHPEHGFISPGK 699 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+PL Q L VL+ + + K +VNL L + + I ++ Sbjct: 700 FIPLAEQTGLIEPIGKWVLKEACRQVKIWRESNKSLIMNVNLSSKQLEKAGLERNIYQIL 759 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + ++ P + LE+TE A S ES++ +++L G R++IDDFGTGY++ L+R Sbjct: 760 QDINLDPACLNLEVTESAAMSKLESNVRTLKRLKFMGIRLSIDDFGTGYSSLAHLQRFPL 819 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID F+ + IV +I +LA L +VAE +ET Q ++ Y Q Sbjct: 820 DELKIDRSFIISLKAGKACHRIVHAIVELALGLKLKMVAEGIETNSQLNMVKTFNCHYGQ 879 Query: 718 GYLIGRPQPLAD 729 G+L + + Sbjct: 880 GFLFSKAMAANE 891 >UniRef50_Q9HYT3 Uncharacterized signaling protein PA3311 n=9 Tax=Pseudomonas RepID=Y3311_PSEAE Length = 783 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 126/681 (18%), Positives = 231/681 (33%), Gaps = 47/681 (6%) Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 L + F+V C + R L+ +WQ + GI + ++ F Sbjct: 85 LVALAFLVACLAGYTALDMVERVGNSLSHPRLWQWI--GAFCLGSGIWATHFVAMLAFHA 142 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL----------TRMIVSPHFAQIL 199 P+ + + S T + F L + + Sbjct: 143 PIALRYDLPITGLSLLIAVAASYLTMYMTARPRFGLLPCLLAACCIGLGIAAMHYTGMAA 202 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 R A ++ + L A Y L Sbjct: 203 MRSVATQYYQPSLFALSVLIAIGAAFTALAAVPYLRGRRSARYRYMKLIASLLLAGAIAA 262 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEY-SLAFILAVLISFSVCLLYMVRIYHRSEWL 318 F + V ++ + L +LA I+ Sbjct: 263 MHFTGMAALVLSVPAGTPLELQASADSLRLGWLTGVLASAIAACGIWAAWSEKQRERRLS 322 Query: 319 N---------------RRWHLQALTDPLTLLPNFRALEQ---------APEQEAGKSFCC 354 A D LT L N A + G + Sbjct: 323 ENSRVNALLNQLDHAHASLRQMARYDSLTGLQNRTAFNEVFVQHLENCRLR-GKGLAVMF 381 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D+ + ++ G ++ + + ++++++ + + G E + L+ + Sbjct: 382 LDLDHFKRINDSLGHDSGDQLLKIVSERIRSVLRDSDVVARFAGDEFCV-LADLTQDHEA 440 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + L I + L M + + E + LL QS A Sbjct: 441 HILSQRLMQKMKEPIALDGRTLVMTASVGVSLYPNDGEQCEELLKNAGLALHQSKACGRN 500 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 A + + T+++ + +R AL L L+ QPI + E + ++ Sbjct: 501 NA-QFFSRQLLVRATQELQMEEELRQALRDDQLELHYQPILALADGEVHQLEALVRWRHP 559 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 G++ PD+F+ L + + D VL + L + R +VN L + Sbjct: 560 TQGLLGPDRFIGLAEANGMIDQLDDWVLRRACRDLRSLHLAGHERLRVAVNCCASNLGRA 619 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + ++ ++ + LE+TE+ N + ++ +E+L + G ++IDDFGTGY+ Sbjct: 620 SLVDEVRHALEQAGLAACFLELEVTEDALMYNIDQTIPLLERLRELGVSLSIDDFGTGYS 679 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+RL D +K+D F+ DI + D I ++I +A+ L VVAE VET QQ A Sbjct: 680 SLAYLRRLPLDALKVDRSFIMDIPASQRDMEIAQAIIAMAQKLHLKVVAEGVETPQQLAF 739 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L + + +QGYL RP PLA Sbjct: 740 LRENHCELVQGYLFSRPLPLA 760 >UniRef50_A4XFJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFJ6_CALS8 Length = 1015 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 103/573 (17%), Positives = 206/573 (35%), Gaps = 37/573 (6%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-------LLCTPYENDFIAGYLV 244 + + +E+R + + + ++ F + Sbjct: 433 ELVNTLEILNKQTELLKEEEERYKFIVENISDCIWEFDVAEKRIEFYGNLKDYFETDKIN 492 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-----YNQNFLQGVETEYSLAFILAVL- 298 P + + + L Y ++ + V Sbjct: 493 PKID-YYAWLELYHPDDIKAVMEKIQRAFELRDEKIEYEARIKDKNGNYKWVSVHIKVFY 551 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 L+ + Y + R A D LT LPN + E + Sbjct: 552 DNRGKPEKLIGINIDYSAKKEYEDRIKYLAYYDDLTNLPNRKLFENKLSELIKKAAQTGK 611 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK---LYQLPGSELLLVL 405 + + IDN + ++ YG + C+R+I + + ++ E ++ G E ++L Sbjct: 612 IGAVILIDIDNFKDINDLYGHEVGDECLRTISQKIAEYLKGLEVQNYFSRVGGDEFAIIL 671 Query: 406 SGPETEGRLQHMV---NILNSRQIHWNNTG--LDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +G E + + + + +I L + + + +L + Sbjct: 672 NGLEKKDFVIEVCTEIQKIFENEIFLEKIERGLYTTISMGISFYPDDGRDTKEILRNVDM 731 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GE 517 + + + + ++ + +R A++ + +LY QP+ N E Sbjct: 732 ALSLAKENGKND-FQIFMPFLLLKNLNKIEIEKNLRKAIENDEFVLYYQPVVNLENMEIH 790 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 + ++ G+++P +F+P+ + L R V+E LK L + Sbjct: 791 SVEALIRWFLPHKGMVSPLEFIPVAEESGLIVRIGEMVIEKALKDLKDWERKGINDIHIA 850 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +NL K + +L ++Y + P V EITE A N + S+ + L + G + Sbjct: 851 INLSARQFKTKYFENTVAKLLEKYSVDPVKVSFEITETGAVENFDVSLKILGFLCQMGIK 910 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IDDFGTGY++ L++L +KID F+ +++ + IV I +A L VVA Sbjct: 911 FLIDDFGTGYSSLIYLRKLPISGVKIDKSFISELMFSKESRAIVEGIILMAHKLGLKVVA 970 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E +E +Q +L ++G + QGYL +P P + Sbjct: 971 EGIENNKQLEILKEIGCDFGQGYLFSKPVPKEE 1003 >UniRef50_C3MGT7 Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain n=1 Tax=Rhizobium sp. NGR234 RepID=C3MGT7_RHISN Length = 928 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 119/749 (15%), Positives = 247/749 (32%), Gaps = 37/749 (4%) Query: 7 LIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW-RGVV 65 + I L FT ++ + I I ++ + + F+ Sbjct: 178 AAMTLGIVVLHFTAMGA---VTMEVEFATGIQEGMIQPHFLAFVLAGTAFFLLSAVLIAA 234 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL 125 + + + +++ + W G G T+ + + Sbjct: 235 GFARHAEILAVASEKEFSRFVGSVKDYAIYMLDVDGRVASWNAGAEANKGYTAEEIVGKN 294 Query: 126 FWLGLVTP--IGIKCSMYLVGSFFDFPLKISTFFGDADAI-FTVVDLLSLFTAVLIYNML 182 F + L + + + D F ++ + Sbjct: 295 FACFYSPEDQAANLPARALRIALEAGQYETEGWRYRKDGTRFWAHVVIDTIVGEDGGHAG 354 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYEND 237 F + + I + L + LL+ L + Sbjct: 355 FIKIAKDITKRKEDADRIAEVSKNLDIALENMTQGICLFDHADRLLISNRRCLEIFELPE 414 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ------NFLQGVETEYSL 291 +AG+ + ++ + P + + + +F++ + S+ Sbjct: 415 SLAGFGLTFREVLDRMCARTYPDPAVAEAKSEAAYRKHRLEIAGKGGGDFVEKLSNGRSI 474 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 L + + A D LT LPN ++E Sbjct: 475 LVKHRTLPD--GGWVSTYEDITERLDSEEQISFLARHDSLTGLPNRLQFNSHLDEELDAA 532 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + +D + ++ +G + +I + + +QE E + + G E Sbjct: 533 VWFSRKVAVIGIDLDKFKEVNDLHGHAAGDFVLVTIAQRMKEHLQEGEFVARFGGDEFAA 592 Query: 404 V--LSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 V + ++ + + L G + + ET L+ Sbjct: 593 VKRFEDLSEVHDFLRRIETCLQEEMRFGDFELKSGGSMGVAIYPQDAETADTLINNADLA 652 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEG 518 ++ A + E + + L N + A+++ +L L+ Q + G Sbjct: 653 MYRAKAA-LNQTICFYEVSMDEAARGRRALANDLWEAVERSELALHYQVQKSVTTGDVIG 711 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 Y+ +L + G++ P++F+PL + VL + A+ + + +VN Sbjct: 712 YEVLLRWNHPERGLVPPNEFIPLAEECGAILPIGEWVLRQACREAASWDAEY---KIAVN 768 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P+ L ++ + + + + + LEITE + E ++ + + G IA Sbjct: 769 LSPVQLANGDVVSLVHSILVETGLDAKRLELEITESTIIDDKERALLTLRAIKALGVTIA 828 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ E L+ D IK+D F+ ++ + I+R+I L + + V+AE Sbjct: 829 IDDFGTGYSSLETLRAFPFDKIKLDKSFMSEVEGSPQAKAIIRAILALGHSLQVPVLAEG 888 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VETQ+Q +L G QGYL+GRP P+ Sbjct: 889 VETQKQLDILQAEGCDEAQGYLLGRPAPI 917 Score = 78.5 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 25/328 (7%), Positives = 73/328 (22%), Gaps = 16/328 (4%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV 64 + I+ F + + + + + +A + L+I R Sbjct: 53 AGIASGFGIWATHFIAMLAYDP-GVVLGYHTSLTTLSLVVAILLTTTALAIATYAKGRPA 111 Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTF-VVLCACAILRWQLGTRWRYGLTSRYVWQ 123 + + + H + + G + L ++L L R + Sbjct: 112 WLLGGLVLGAGVGCMHFLGMAALELPGFIRWDRTLVVASVLAGVLFEMVAIFAIKRDQSK 171 Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKIS-----TFFGDADAIFTVVDLLSLFTAVLI 178 +GI + ++ + F + + ++ Sbjct: 172 AQLAATAAMTLGIVVLHFTAMGAVTMEVEFATGIQEGMIQPHFLAFVLAGTAFFLLSAVL 231 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 F ++ ++ + R + + A Y + Sbjct: 232 IAAGFARHAEILA--VASEKEFSRFVGSVKDYAIYMLDVDGRVASWNAGAEANKGYTAEE 289 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 I G F+ A + T + ++ + Sbjct: 290 IVGKNFACFYSPEDQAANLPARALRIALEAGQ----YETEGWRYRKDGTRFWAHVVIDTI 345 Query: 299 ISFSV---CLLYMVRIYHRSEWLNRRWH 323 + + + + + + R Sbjct: 346 VGEDGGHAGFIKIAKDITKRKEDADRIA 373 >UniRef50_B0C8G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8G1_ACAM1 Length = 911 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 109/568 (19%), Positives = 202/568 (35%), Gaps = 19/568 (3%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL--LLL 229 L + ++ R+ + A +L + L + L L + ++ + Sbjct: 326 LSILTTLAELMGSTFERIRLQDEAAAVLRDSEEQVRLFIDGSPLLLLALDSQGMIHRVSH 385 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + + F I+ +L + + + LQ T Sbjct: 386 FGASQLGYLVDHLIGSPFSILHPDDQTAEIQAYLQTLSNLEIGEIYSREAQMLQADGTLI 445 Query: 290 SLAFILAVLISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-- 345 + LL + L + H A D LT LPN E Sbjct: 446 WARQNARRVHDHRGIPQLLLACEDISKVRSLTDQLHFMAHHDALTALPNHTLFRHTLEAL 505 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 Q + + +D + ++ + + + + L + ++ + +L G Sbjct: 506 IAKTADQPTPFAMLFIDLDGFKKVNDSLSHAIGNELLCQVAQRLQGAVTSSDTVARLGGD 565 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +++L + M + + H N + +G + +T L+ Sbjct: 566 EFVVLLPRAASPDAAAKMAQAILQQLRTPFHVQNHEIFIGGSIGISLYPAQGKTSSELMK 625 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--K 514 Q ++ A +S +++ + + +RTA+++ +L L QP Sbjct: 626 QADLAMYRAKAQGRN-NYQFYSAQLSATLQRKLAIEHALRTAIEKDELNLVFQPQVGPEG 684 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 + G + ++ GI+ P F+P+ + +L A VL+ L LA Sbjct: 685 QILGLEALVRWHHPTLGIVPPSTFIPIAEESHLIAALTDWVLDHSLAILAPLNSAYPHLY 744 Query: 575 FSVNLMPLTLLQK-NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ L + R+ R + A+ LEITE E + L Sbjct: 745 VAVNISAQEFLAPCTLVKRVRRALTAAKLPGSALELEITESVFLHPGEVPSQLLTALKNE 804 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G RIAIDDFGTG+++ L L D +KID FV DI + I++ I +A + ++ Sbjct: 805 GVRIAIDDFGTGFSSLAYLLNLSFDTLKIDRTFVSDIDIDPAKEGIMKGILTIANSLGVT 864 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLI 721 VAE +E+ Q L +LG + QGY Sbjct: 865 FVAEGIESSSQLHCLQRLGCSHYQGYYF 892 >UniRef50_Q0AAF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAF1_ALHEH Length = 1023 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 105/568 (18%), Positives = 198/568 (34%), Gaps = 34/568 (5%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R I + R A T + + I GY Sbjct: 464 VRDITEARTTEAELRIAAAAFETHLGMMITDAE-------GRIQRVNDTFCRITGYQQAE 516 Query: 247 FF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---S 300 + + V + + + + Sbjct: 517 VLGQTPRLLSSGRHDERFYQRMWAQVREHGSWEGEIWNRRKNGEIFPEWQTITAVRDDSG 576 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + + + R+ H A D LT LPN R L + + Sbjct: 577 EITHYVATLHDISDRKEAERQVHRLAFYDTLTGLPNRRLLLERLAHCLRGNHRSRRQGAL 636 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D+ + ++ +G ++++ L ++E++ L +L + L++L+ E Sbjct: 637 LYLDLDHFKAVNDAHGHGTGDRLLQALSGRLSNSIRESDTLARLNADDFLVLLTDLAEET 696 Query: 413 RLQHMVN--------ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + F ++ + + + Q Sbjct: 697 QAAARGAEAAAEALIKQLEAPLVMDGEPIHLHASIGITLFRNHETKPEVAVQEAEQAMHQ 756 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEI 522 + A+ + ++ ++V L +R A+ G L L+ QP + + GY+ + Sbjct: 757 AKQSGRN-AICFFDPLMQADMLRRVHLERGLRRAVHDGGLTLHFQPQVGPDGDILGYEAL 815 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLM 580 L + G + P F+P+ Q L +L++ + LA + SVN+ Sbjct: 816 LRWPHPEQGPIGPGVFIPIAEQSRLIIPLGRWLLQAAARQLAAWARDPATRALTLSVNIS 875 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + ++ + + + + LE+TE + +E+L G ++D Sbjct: 876 SVQFRHDDLVAAVREALETTGAPAERLKLEVTESLLMEEPDQVCATMERLRALGVHFSLD 935 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ L+RL D +KID FV+ + IV SI LA++ SL V+AE VE Sbjct: 936 DFGTGFSSLAYLQRLPLDELKIDQSFVQSLEQAPAADAIVGSIIGLARSLSLHVIAEGVE 995 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T+ Q+ L G QGYL G P PLA Sbjct: 996 TETQRTRLAAHGCHRYQGYLFGAPAPLA 1023 Score = 44.6 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 12/151 (7%), Positives = 31/151 (20%), Gaps = 10/151 (6%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-------E 235 + + + + +E R L + + + Sbjct: 328 YLHRRSLERALRLEVRGREATQEALQSREARLRALVDAMPDLLFMFDREGRFIHIHADEP 387 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + + T+ L P + ++ L TE + ++ Sbjct: 388 EKLLLPAEQALGKHFRTVLPEPLSTPLKDALARLAAGEDPVQYDYTLTLGGTERTFTTVV 447 Query: 296 AVLISFSVCLLYM---VRIYHRSEWLNRRWH 323 + L VR + Sbjct: 448 RPVRGADNQYLGALAQVRDITEARTTEAELR 478 >UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase n=11 Tax=Clostridium RepID=A7GAB5_CLOBL Length = 892 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 98/525 (18%), Positives = 206/525 (39%), Gaps = 23/525 (4%) Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + + + + I G + F L ++ L Sbjct: 369 IIDFRVVEINNYFSELLNTDKENIIGENISSFIPSILNENPILIKSIKKISSVGGKETLE 428 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 L+ F V ++ ++ + A D LT L Sbjct: 429 EIYIEELRK-------WFSAVVYSMEVDYFALLLTDITENKKDKEKILGLAYYDSLTGLS 481 Query: 336 NFRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 N + + + + + + +D+ + ++ G + + + + L+ Sbjct: 482 NRKKIIETINKTINSYENEKFAVLFIDLDHFKSINDTLGHDVGDYVLEKVSARFKMLLSP 541 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDG 446 K+ +L G E +++ + + + + + I + L +G + Sbjct: 542 KNKIGRLGGDEF-IIVQNITSISDAEKLACKICTTLNHSIKYKEDDLFIGASIGISIYPE 600 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + L+ + + + ++ + ++L N +R AL++ +LL+ Sbjct: 601 DGKDTSTLMKNADAAMYAAKKNG-GYKYEVYSRSMNERALDDLILENRLRRALEKNELLV 659 Query: 507 YAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QPI + + + ++ + I++P++F+PL A D VL Sbjct: 660 YFQPIYHLKTSKIIAMESLVRWKFDNK-IISPNQFIPLAKNIGEIANIDNWVLNKACSQC 718 Query: 564 ATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 K SVN+ + KN ++ + + + P + LEITE++A + + Sbjct: 719 NLWQKQNNKPLYVSVNISFKQMKDKNFVDNVLNILRTTKLEPSYLCLEITEDEAMEDVDL 778 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 S+ +E L + G +I++DDFGTGY++ + +L D IKID +K+I + IV+S Sbjct: 779 SIKTLEALKRHGIKISLDDFGTGYSSLSYVTKLPIDNIKIDKSIIKNIHKDNKSLQIVKS 838 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 I ++K+ +++VAE VET +Q +L +LG ++QG+ I P P+ Sbjct: 839 IILMSKSLDINIVAEGVETIEQLEILQELGCDFIQGFYISEPLPI 883 >UniRef50_Q2SNY4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY4_HAHCH Length = 994 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 107/567 (18%), Positives = 195/567 (34%), Gaps = 23/567 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 +TRMI S RD L K T + AL L I GY Sbjct: 406 LGRITRMIGSRRDISKEKSRDEQLLLAKSVFDHTPQGVFALDTEFRFLTVNNAFSQITGY 465 Query: 243 LVPVFFIIFTLGVGKL---RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + R F + + + Y + + Sbjct: 466 ETEEVIGSSLEDFSQAPNKRQVFSRIRDELFLRGRWQGELYEKRKSGEFYCQWLQITSII 525 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + + + H D LT L N + EQ Sbjct: 526 NTEGATTHYAGLFSDLTERKQADEKLHYLLNYDELTGLANRMLFRERLDKILRKVREQGL 585 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D ++ G ++ + + L +L E ++ Sbjct: 586 SINMLLLNVDRFRQVNESLGQDRGDELLKQVATRISQTASHAHTLARLGSDEFAILTP-A 644 Query: 409 ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 ++ ++ L + + + + N +Q L+ Q + Q+ Sbjct: 645 KSRSQISRFCEQLLDELKAPFNIDGHEFYVSTSIGVTQAPDNGWEIQTLMQQANMAVRQA 704 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + M+ + ++ + +R A+ + ++ QP + G + + Sbjct: 705 KYLGGN-TYEFYSRMLRSMSRMRLDVETELRRAIQNQQMEVFFQPKLSLDSGRITGVEAL 763 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 G++ P F+P+ + L Q+L + A + + SVNL Sbjct: 764 ARWRHPQRGLIAPSDFVPMAEESGLITELGEQMLGAACAQAAAWSREGLDNIQVSVNLSA 823 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L Q N+ + ++ + + P + LE+TE N + + + +L + G RI +DD Sbjct: 824 HQLRQSNLPQMVRKVLQDTELPPHLLDLELTESTLMENMSRTQFMLSRLREMGVRITVDD 883 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR + +KID +F+KD N DA I R++ L K+ +L V+AE VE Sbjct: 884 FGTGYSSLSYLKRFPLNALKIDRMFIKDAHHNADDAAITRAVIMLGKSLNLEVIAEGVEH 943 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L + G +QGYLI P Sbjct: 944 EGHLQFLRESGCHTVQGYLIAEPLGAE 970 >UniRef50_A6C049 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C049_9PLAN Length = 572 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 92/553 (16%), Positives = 202/553 (36%), Gaps = 25/553 (4%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 ++ +A +L I+GY + + Sbjct: 4 IHSELIYLQAFRDAVDEAGIVAINDTKGRILDVNDNFCQISGYTREELIGSDHRILRSDQ 63 Query: 260 YP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + F + + Y + + + + L + Sbjct: 64 HSNEFFREMYRTIRRGKTWRGEICNKAKNGRLYWVNTTIVPMFNDQGKIDGYLALRIDIS 123 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------QEAGKSFCCLRIDNLEFMSRHY 367 + L +R A DPLT LPN ++ ++ + + + D + ++ Sbjct: 124 EQKRLMQRLQHLAHHDPLTGLPNRVSILESIQKVIDRKSGKHFALLFMDFDRFKLINDSL 183 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKL--YQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + + +I L ++ ++ + +L G E +++L + + N L Sbjct: 184 GHDVGDKLLEAIADRLRKTVRASDTIQAARLGGDEFVVLLENLHSPDDAILVGNRLLETL 243 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 SR + + ET +L ++ A + + ++ Sbjct: 244 SRPYILGGYTIYSSASIGIVTSEHRSETASEMLSDADLAMYEAKAAKQDRPI-VFDRVLR 302 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + K++ + N +R + + +L L+ QPI + E G + ++ + G++ PD+F+ Sbjct: 303 DKAQKRLYIENQLRDVISRDELKLFYQPIIDLESGELRGVEALIRWFHPECGMIPPDEFI 362 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPR--FSVNLMPLTLLQKNIAGRIIRL 596 + + ++ V++ + LA VN+ L + + Sbjct: 363 SVAEEMDMIIPVGNFVVDEACRQLAAWRKTLGPQAPENLHVNVSRKQLEHPTLVSIVAEA 422 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +++ I + + LE+TE + E+S+ + L K G ++ +DDFGTGY++ L Sbjct: 423 LEKHEIPAKCLHLEVTESIIMHDREASIETLNDLKKLGVKLDVDDFGTGYSSLSCLCDFP 482 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D++K+D F+K + +++ ++ LA+ L V+ E +E +Q LL LG + Sbjct: 483 IDVLKLDREFIKRSDRDRE-VLLIHALIILAEKLGLEVIGEGIENIEQLQLLQGLGCRLG 541 Query: 717 QGYLIGRPQPLAD 729 QGY +P + Sbjct: 542 QGYFYSKPICGDE 554 >UniRef50_A5PAA5 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAA5_9SPHN Length = 783 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 118/664 (17%), Positives = 217/664 (32%), Gaps = 26/664 (3%) Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM 140 + +GS + V+ + G+ + + P Sbjct: 88 WRRILILQAIGSTIWFVVFPYLAPYAEGLEIAVLGIIGTAILCGTLLVHRNAPQAALFHT 147 Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA-VLIYNMLFYYLTRMIVSPHFAQIL 199 + + +G ++ + F R + Sbjct: 148 LTMAPSLAVAAVMIGGWGAWPSLILIASFAVALIGETRTQERYFVGAARAEIERRENNAT 207 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 R + + +E+ + L + + + + + G+ R Sbjct: 208 VR--MLLNDYEEQSSDWLWTVGPRGNMRDVTERLGAALSTDPDHLEGMPFLDLFVAGEER 265 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 S L + + R + Sbjct: 266 DALATRLLERSPFRDLIVRLRVK---GDVRYWRISARPRDD--GRMSGVARDVTAGRLIE 320 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMM 371 R A D LT L N + + + + L +D+ + ++ G ++ Sbjct: 321 ERVAFMAHYDNLTGLANRYLFNERLRSLAGEQASRGSNIALFYLDLDDFKAINDTRGHLV 380 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW 428 +R + L ++ + + +L G E +++ +G L + S Sbjct: 381 GDRMLREVGTRLEQEVRSEDLVARLGGDEFAVLIETRAGDGLLIERAHRFLSVVRAPYEI 440 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + R + L+ + + L E + ++ Sbjct: 441 EGHSYRVSTSVGVARCTDGDCDAEELMRRADLALYAAKEKGRD-NLALFEPALDRIARER 499 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 +R AL +G + ++ Q I + E G + +L GI+ P FL + + Sbjct: 500 RETEIDLREALTRGQMRMHYQAIVDLDTGETTGLEALLRWYHPQRGIIPPGDFLTIAEET 559 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 + V+ L A P R ++NL P + N+ + + +I+P+ Sbjct: 560 GMITSLGEWVIRQTLSDAAALPG---NFRIAINLSPTQVKNPNLVATVAQAIHATNIAPE 616 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 V LEITE + + +L + G RIA+DDFGTGY++ L+R D IKID Sbjct: 617 RVELEITEHVLMDQGAAGHVTLLRLRELGIRIALDDFGTGYSSLGYLRRFPFDRIKIDRT 676 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV D+ ++ IV +IT LA A + AE +E Q+Q LL KLGVQ QG+LIGRP Sbjct: 677 FVTDVASDLGSQAIVSTITRLADALGMDTTAEGIEDQRQLDLLRKLGVQEAQGFLIGRPV 736 Query: 726 PLAD 729 P + Sbjct: 737 PPEE 740 >UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Dickeya dadantii Ech703 RepID=C6C4P4_DICDC Length = 678 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 129/665 (19%), Positives = 235/665 (35%), Gaps = 31/665 (4%) Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 L ++ A R L G +GI ++ Sbjct: 9 LMIAISWLVAFIASFVALDMAGKVAYCEKRVALFWLTAAGTAMGMGIWAMHFIGMLAMHL 68 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF---AQILWRRDIAP 206 P+ +S V SL + L + R++++ + Sbjct: 69 PITVSHNLNLTAVSLLVAIFSSLISLHLTASAPQLTRARLVLAAQTFGGGVVCMHYTGVA 128 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 ++ W A+S+ + + + + + + Sbjct: 129 AIAVADGIHWNGWWVAVSIPVAFVASGIAMWLAFSLRLRQRLFARLAAALVIGAAIAAIQ 188 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRI-------YHR-SEWL 318 + + + + + E S+ L+ L+ + Sbjct: 189 YIGFSPLAHYHGDSV---NQRELSVWVSAISLLILGAMLVISMLDAQWRASRLTDSLRQA 245 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 N + A+ D LT LPN LE+ + + + +D + ++ +G Sbjct: 246 NDQLARLAMHDALTGLPNRMQLERELESCLHHARQHRQTFALMYMDLDGFKIVNDAWGHY 305 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIH 427 + + + L + L ++ G E +L++ E + + + L + H Sbjct: 306 LGDQLLAGVTTRLREYLGPGMTLARIGGDEFVLLMRDCG-EEQAAALADKLVQAIEQPFH 364 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + L + F + T L S Sbjct: 365 QSGYTLRVTLSVGISLFPRDGATSHDLRLNADTAMYSIKQTGRN-GWIFYSPSFSHHGNH 423 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 Q LL + AL L+ QP N G++ ++ G++ PDKFLP+ + Sbjct: 424 QPELLQALPKALALNQFRLWYQPKYRPPNGPIHGFEALIRWQHPQKGLLLPDKFLPMAEK 483 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L V+ + L + ++N+ P+ Q N+ I +Y I Sbjct: 484 TGLIIAIGEWVINEACRQLQVWHQQGQVHWTVAINISPVQFDQHNLVSVISDALAKYQIP 543 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + LEITE A N E S+ + +L + G +++IDDFGTGY+N L+RL A +KID Sbjct: 544 PYMLTLEITESVAMRNLEKSLNILHELDRLGVKVSIDDFGTGYSNLLSLRRLPARELKID 603 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FVKD++ + +A++V +I ++A++ +L VVAE VET +QQ LL +LG LQG+L+ Sbjct: 604 RTFVKDLLLHNKNAVVVTTIIEMARSMNLEVVAEGVETPEQQELLTRLGCYSLQGFLLAP 663 Query: 724 PQPLA 728 P P Sbjct: 664 PMPPD 668 Score = 60.8 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 28/299 (9%), Positives = 67/299 (22%), Gaps = 9/299 (3%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL---F 57 + I+ + F + + + ++ + S + + + + L+ Sbjct: 44 LTAAGTAMGMGIWAMHFIGMLAMHLPITVSHNLNLTAVSLLVAIFSSLISLHLTASAPQL 103 Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 + G + ++ + A + + V + + G + Sbjct: 104 TRARLVLAAQTFGGGVVCMHYTGVAAIAVADGIHWNGWWVAVSIPVAFVASGIAMWLAFS 163 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 R + L IG + F + V + L + Sbjct: 164 LRLRQRLFARLAAALVIGAAIAAIQYIGFSPLAHYHGDSVNQRELSVWVSAISLLILGAM 223 Query: 178 IYNMLFYY---LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 + + +R+ S A R S L Sbjct: 224 LVISMLDAQWRASRLTDSLRQANDQLARLAMHDALTGLPNRMQLERELES-CLHHARQHR 282 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + + + F I+ L L L + E+ L Sbjct: 283 QTFALMYMDLDGFKIVNDAWGHYLGDQLLAGVTTRLREYLGPG-MTLARIGGDEFVLLM 340 >UniRef50_Q2SKH9 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKH9_HAHCH Length = 999 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 100/652 (15%), Positives = 207/652 (31%), Gaps = 44/652 (6%) Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 + L L+ + + +++ T +L Sbjct: 328 ARLVLRTALWIGGLVLIAGTVGIFLLVTFNNRLKNRVELHTHQLREANQALYEQTQTLME 387 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQI----LWRRDIAPSLGKEKRAFTL---SWLAALSVLL 227 L + L + A + +IA +E L + V++ Sbjct: 388 KEQALYKLNHALEARVEERTEALAQANQELKLEIAEREQRELSLRLLSKAVESSRSGVII 447 Query: 228 L---LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY----PFLNLTWAVSTLCLLNYNQN 280 + N F+A + + + ++ + Sbjct: 448 TNADGIIVYVNNAFLAMTGYDRMQVFDKHISSLEERVCFPRLDQINFRELPEPMIRDELH 507 Query: 281 FLQGVETEYSLAFIL--------------AVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 ++ + + + A Sbjct: 508 CYDASRNQHWAQISIFPIYEQAARNYGVFRPAPEKVSHYVVTCEDITLLKKSKDEMEQLA 567 Query: 327 LTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT L + + ++ + + ID+ + ++ +YG +++ Sbjct: 568 FYDHLTGLESRLLFKLRLENAITRAVRDKSMIALMFIDIDHFKEINDNYGHDAGDEVLKT 627 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDM 435 + + +++N+ + ++ G E ++LS + + + +R + + Sbjct: 628 VAARIKQNVRKNDTVARISGDEFTVILSDIRGHVDARRVAQGIRRTLNRPFKFAGKEYIV 687 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G + L LL Q+ + + ++ + K+ L + Sbjct: 688 GASIGISIAPDDGVELDELLKNADTAMYQAKRNGRND-IQFFSHSMNEEAKKKQTLEAEM 746 Query: 496 RTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 L + L QP+ + + G + +L G++ PD F+PL + L Sbjct: 747 IQGLSKKQFRLDYQPVIDLETKKLVGLEALLRWNHPSQGVIYPDHFIPLAEETGLIVELG 806 Query: 553 LQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ ++ ++N+ L K + I R+ P + LE+ Sbjct: 807 KWVINEVISATRELRKMGFSDVGVAINVSARQLRDKGLIADIGRIVAANRNEPCNIQLEL 866 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE E S +I L+K GF I +DDFG GY++ LK+L D IKID FV +++ Sbjct: 867 TEATIIEELEQSNRSINDLNKLGFGITVDDFGAGYSSMSNLKQLPIDCIKIDKSFVHNML 926 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 DA IV+++ +A L+VVA VE +Q L + QG+ + Sbjct: 927 RKGDDAEIVKAMISMAHNLKLNVVAVGVEDAEQVKFLKENKCFLAQGFYFSK 978 >UniRef50_B8DQX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQX2_DESVM Length = 936 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 125/699 (17%), Positives = 227/699 (32%), Gaps = 33/699 (4%) Query: 60 GWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSR 119 G +H + T V A R + W + + + Sbjct: 224 SPGTFPGAFTGGAADGPEVYHHVLPVERGGISICTVSVGLALDGYRAEQRAAWWH-IGAL 282 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 L L + + ++ G I T +L L A Sbjct: 283 TAMAVLVALATALLLSRTVTRTVLRLSGWVRSIGPGNMGQRIRIDTGDELEGLANAFNGM 342 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDI-APSLGKEKRAFTLSW---LAALSVLLLL-----L 230 L R + H RD A + + A + + + Sbjct: 343 LDLLEASQRELNEAHRELERRVRDRTAQLCDANAKLHLMGEVFTHAVEGIFITDSAGTVV 402 Query: 231 CTPYENDFIAG-YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + I G + + ++ + + Sbjct: 403 AVNPAFERITGVDAQSMVGRLSPALGMVPVNGTRSVWDEMLEHGSWIGETRGPHRDGWQI 462 Query: 290 SLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQ 342 L + + + + + + + QA D LT LPN + L Sbjct: 463 PQWLSLVSIRDETGVILNCVGVFSDITDIKQKEAQITHQANHDDLTGLPNRKHIFELLHD 522 Query: 343 APEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 A + + + +D +F++ Y + + R L ++ + L +L G Sbjct: 523 AIARASVRGQKLAVVFIDMDGFKFINDSYDHATGDQLLCDVARRLRAALRPGDMLGRLGG 582 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E + + G +G L ++ L + + G + + + ++ LL Sbjct: 583 DEFVAAVGGISDKGHLDGIMRRLFETFAEPFEYGGMGFSVTASFGVSVYPDDGDSANALL 642 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 + ++ A+ E + T++ + I+ A+ + L QPI + Sbjct: 643 SRADIAMYRAKDMGKN-AIAVFCEEQCLEFTRRYRMDQEIKAAIAGREFRLVYQPIADAR 701 Query: 514 -KEGEGYDEILARLKYDGGIM--TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + +L + G + P F+P+ N V+E A + Sbjct: 702 TLRVRKVEALLRWERD--GAVVAPPSVFIPVAESSNAIREITRLVVEMACVQHAAWRLEG 759 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 +VN+ L I Y + P A+ +EITE N E + L Sbjct: 760 LTLPVAVNISSRCLNSDETISHIAACLNAYDVPPDALEVEITETSLMQNYERGNAMLCTL 819 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G R+++DDFGTGY++ + L R+ +KID FV++++ IV +I LA++ Sbjct: 820 RDLGVRVSLDDFGTGYSSLQYLARMPIHALKIDRTFVQELLEEGGSLEIVETILGLARSL 879 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+ VAE VET Q + L +GV YLQGY +GRP P D Sbjct: 880 RLATVAEGVETAAQLSALRGMGVDYLQGYCLGRPLPADD 918 >UniRef50_A4Y0T1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Pseudomonas RepID=A4Y0T1_PSEMY Length = 765 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 107/597 (17%), Positives = 195/597 (32%), Gaps = 39/597 (6%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHF-----AQILWRRDIAPSLGKEKRAFTLSWLAAL 223 L + A+L + +I F E R A Sbjct: 145 LDGMLEALLEPSPASDCFASLIKKVFFDIGLALDSYGAAQRKALQDSEARYARAMRGAND 204 Query: 224 SVL---LLLLCTPYENDFIAGYLVP---VFFIIFTLGVGKLRYPFLNLTWAV-----STL 272 + L + + + + + L A+ Sbjct: 205 GLWEWQLEQDQLYLSERWTSMLGLDRDSLAPTSRSWFSRVHGDDLPGLRQAIDNHLRGLS 264 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 L++ + + + + + + H A DP Sbjct: 265 PTLHHEYRIRRRDGSYLWVLVRGVAETCSGGVRRIAGSQSDISQRRAAQEQLHHAARHDP 324 Query: 331 LTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT L N L + +Q + + +D + ++ G + + + Sbjct: 325 LTGLANRARLGELLQQALQRQQRPGAREAALLFIDLDRFKLINDSLGHQIGDRVLVEVAE 384 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYG 438 L ++ + L + G E + +L G + + + + L + Sbjct: 385 RLSHCLRPGDHLARFGGDEFVALLDDLACMGDAERVAQRMLDSLHPPLRLQEQTLAVTAS 444 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 L PL ++ + + Q +Q+ L N + A Sbjct: 445 IGIAALQERGHPLDPL-QAADLALYRAKSAGKAQ-FARYSSELQQQAQRQLELQNALAQA 502 Query: 499 LDQGDLLLYAQPI--RN-KEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 G+L L QPI + + G + +L ++P +F+P + + Sbjct: 503 CSCGELRLVYQPICRLDQGQPVLMGVEALLRWQHDGRE-ISPLEFIPCLEESGEILAVGD 561 Query: 554 QVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + + R SVNL L Q + A R+ + + + +++LEIT Sbjct: 562 WVLRQACTQVRAWQLAGQTQLRCSVNLSSRQLQQGDFAARVADVLRETGLPAASLVLEIT 621 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E Q ++ ++ + +L G ++A+DDFGTGY++ LKR IIK+D F+ Sbjct: 622 ESQLMQDSAQNLACLRELASLGVQLALDDFGTGYSSLGYLKRFPLHIIKVDKSFIAGTPQ 681 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + I R+I L + L+VVAE VE Q Q L + G Y QGY RP+ D Sbjct: 682 DAESLAISRAIIGLGHSLGLTVVAEGVEQQAQIDFLGREGCLYAQGYWFSRPRSPDD 738 >UniRef50_B7ITK1 Sensory box/ggdef family n=144 Tax=Bacillus cereus group RepID=B7ITK1_BACC2 Length = 914 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 90/569 (15%), Positives = 195/569 (34%), Gaps = 25/569 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPY 234 L + ++ K+++ +L + + L Sbjct: 324 RLQAFNAQLEEKVTLRTSDLVHKSEALSQKQQKFKSLYEYHPDPIFTIDLNGIFLNVNKA 383 Query: 235 ENDFIAGYLVPVFFII-FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + + + F++ + + ++ V + + Y L Sbjct: 384 GSVLLGAPTDELLGETCFSIILDEDKHKLALALEKVKQQESASLQLSSQYKDGFTYFLYV 443 Query: 294 ILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 + + MV+ + A D +T + N + ++ Sbjct: 444 TIIPIIIDGQISGSYIMVKDITALKKQQEEIKYLAFHDTVTKIGNRAFFHKKLKRVIKNA 503 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +D + ++ G + + + + + + L ++ G E + Sbjct: 504 KIAGSEFALLYLDLDRFKAINDTLGHSSGDYILEEVAKRFQSCLPSHTHLSRIGGDEFTI 563 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 ++ E L + N L + + L + + + LL + Sbjct: 564 IIENYTDEDYLFQLCNQLFECMKKSFIIHEHKLTLSLSIGIAIYPHSGIDTATLLKNANV 623 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 + A +L +++++ + +++ L + AL +L L QP + + Sbjct: 624 AMYDAKAKELN-SLSIYDDVIAKKIERRLRLEKDLPNALQNEELFLLYQPQVDSESNKII 682 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 G + ++ + GI++P +F+P+ + LE K + + Sbjct: 683 GAEALIRWNHPELGIISPYEFIPIAEETLQIISIGKWTLEQACKQMKRWHGLGYSHLKIG 742 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q++ I + ++ LE+TE A + ++ + L G Sbjct: 743 VNLSAKEFEQEDFVRSISSTLTNTGLPASSLDLELTERIAMMDERETLIKLRTLKSLGIH 802 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I+IDDFGTGY++ L D +KI F+ T I+++I LA +SV+A Sbjct: 803 ISIDDFGTGYSSLAYLPLYPIDTLKIPREFITMSETCDDGMEIIKTIITLANTLGMSVIA 862 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 E VET++ L K Q++QGY +P Sbjct: 863 EGVETKEHVNFLQKNKCQFIQGYYYSKPI 891 >UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B535_SULD5 Length = 1196 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 104/585 (17%), Positives = 222/585 (37%), Gaps = 37/585 (6%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG-------KEKRAFTLSWLAALSVLL--- 227 L L + + +L + I L K + + + + Sbjct: 604 TVMTLNASLEKKVQERTSELLLLNQTIQEQLDIKKEQEEKLEIFAKIFSNTIEGIAITNL 663 Query: 228 --LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFL 282 ++L + Y + ++P + + V + Sbjct: 664 EGIVLQINDAFSAMTHYAPHEVLGQDIRLLRSYKHPDSLYKEIWDTVFSNTAWQGELWNK 723 Query: 283 QGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T Y I+ +++ + +++ + + H QA DPLT L N Sbjct: 724 RKDGTLYPALLIIHPILNREGHISYIVFIQHDISVLKHNEEKLHQQAYYDPLTKLANRTL 783 Query: 340 LEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + S L +D + ++ G + + + + + L +++ Sbjct: 784 AYDRLQHAITNAKSRRRLVSVLFLDLDKFKNINDTLGHDIGDLLLIEVAKRIQALCSQSD 843 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E L++L + + S+ + + + + Sbjct: 844 TVCRLGGDEFLVILEDITHYETAISVAKGIIAALSQPFYLEGRTISTSTSIGITYYPNDG 903 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 +T++ LL +S + + + +S + V L ++ A+++ + ++ Sbjct: 904 DTMKTLLKNADIAMYRSKTNGRG-SYEIFTTALSDFIKESVKLEERLKKAVEKHEFFMHY 962 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMT-PDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + + G + ++ G+ PD FL ++ + + A + S+ ++ Sbjct: 963 QPIYDLQKKEIIGLEALMRWN--YKGVTYFPDTFLSVMEETKMIAEASSNLFISVFHFIK 1020 Query: 565 THPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + S+N+ P+ +I + + Q V LE+TE N E Sbjct: 1021 KLNEALGRELFVSINISPVQFSVAPFQESLIHALEASTLRAQLVCLEVTESLFLENIEEV 1080 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + L +GF IA+DDFG+GY++ + LK L + +K+D +FV+D+ + D I +S+ Sbjct: 1081 SQKLAALKTYGFCIALDDFGSGYSSLQYLKVLPLNKLKLDRIFVQDLPDSQSDIAITQSV 1140 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L K +++V+ E VET++Q L ++G +Y+QGYLI +P P Sbjct: 1141 LALGKNFNVNVIVEGVETEEQCKFLEQIGCRYIQGYLISKPMPEE 1185 >UniRef50_Q7NSJ7 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NSJ7_CHRVO Length = 662 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 108/542 (19%), Positives = 184/542 (33%), Gaps = 24/542 (4%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP--FLN 264 + L SVL+ L + + + + Sbjct: 120 LSADPASLRSTEALLHTSVLITLYDGNGGALYRNPASRERVAVAGEGWRQHFVHDNDWQQ 179 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRR 321 L V+ LL + R Sbjct: 180 LRQGVAACGEARLLARVNTREG-MRWHEVAARACRDAVTGQDALLVSEVDITDLKHAEAR 238 Query: 322 WHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 A D LT LPN L+QA + + +D + ++ G Sbjct: 239 ASFLANHDVLTGLPNRNGIRSELLPHLQQALRNGRQVALMFIDLDRFKNVNDSLGHACGD 298 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNN 430 + + L+ L+ +EK +L G E L++LS P+ R + + + + Sbjct: 299 ELLIRMAGRLVGLLGHDEKAARLGGDEFLVMLSAPQVAERAEALARRILQALSVPMRLEG 358 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + + +G + L+ ++ + L + ++ Q+ Sbjct: 359 MDVGVSASIGISVCEGRELDLEQMMRHADLAMYAAKDAGRN-NLMFFTPALEARSQAQLA 417 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L N IR LD G+ + Y QP + G + + G++ PD F+P+ + Sbjct: 418 LENDIRRGLDCGEFIAYFQPRVDIASGRVVGAEALARWRHPQRGLLMPDSFIPMCEDCGM 477 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 Q+L + SVNL + + G++ ++ P + Sbjct: 478 VMELGRQILLQAARQQRQWRDRGLDLLVSVNLSACQFVDPGLPGQVEQILADSGCQPDRL 537 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE + E +M ++ + G RIA+DDFGTGY+N L+R +KID F+ Sbjct: 538 ELEITESVLLGHDEQTMSTLQAMRALGVRIAVDDFGTGYSNLAYLQRYPLTSLKIDRSFI 597 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 D+ I IT L + L++VAE VET+ Q A L + G Q QGYL Sbjct: 598 ADLDDKP---AIAELITTLCRMMGLNMVAEGVETEAQLAWLAERGCQEYQGYLCSPALSA 654 Query: 728 AD 729 + Sbjct: 655 QE 656 >UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TM92_ACIAC Length = 724 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 137/728 (18%), Positives = 248/728 (34%), Gaps = 65/728 (8%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG-------WRGVVPVLCGMFCTNLWNF 79 + P+ + S I + + + L+ W V+ G + Sbjct: 1 MPSHYDPMVVAASFAIAVLASYVTLDLARRVHVSQRHIGLVWWAAGSVVMGTGIWAMHFL 60 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 + Q + LG + L + R+ ++ + + GI Sbjct: 61 GMQAFQLPIALGFSGGLTLLSWLAAVLASALALGMASLPRFGRWQILFGAVCMGSGISGM 120 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 Y+ + I V+ LS+ A +I + Sbjct: 121 HYIGMKAMKMSIDIVWDP--------VLVALSVAVAFFASATALRIFQWLIHVRQDRRRA 172 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 W + A + + + + Y A + + G Sbjct: 173 WYQAAAALI----------------MGIAICGMHYTGMAAASFPEGSICLSADGLGGPGL 216 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 + L+ + L L + T L L + N Sbjct: 217 TAMVLLSSGMLLLSTLFTAVLDARLQSTARQLNASLQESNARLT-------------EAN 263 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQ-------------EAGKSFCCLRIDNLEFMSRH 366 + QA DPLTLLPN E + +D + ++ Sbjct: 264 AQLQKQAFADPLTLLPNRLLFEDRLSHALLRLDRMRRRDAGQRLGVMFVDLDGFKPINDS 323 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--- 423 +G +RS L +E++ + ++ G E LL+L + N L + Sbjct: 324 FGHAAGDAILRSAAERLRLQARESDTVARVGGDEFLLLLENVNDPADCLAVANRLLNSLG 383 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + + + + E L+ + E + Sbjct: 384 QPFEVAGKTVQIACSVGIVVYPDHGER-DKLVANADAAMYAAKRAGGN-GYAMFESHMDS 441 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 T Q+ L + +R A+ +G+L L+ QP + G + +L G ++P +F+P Sbjct: 442 DATAQLSLQHDLRQAIARGELSLHYQPKIDARRGRINGVEALLRWRHPLRGNVSPAEFIP 501 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +F L A+ V+E + +A D R ++NL L + +A RI +R+ Sbjct: 502 VAERFGLIAQLGNWVIEEACRQMAAWSWDGLRMRVAINLSAYQLRESGLADRIRDALQRH 561 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + ++ EITE A + ++ IE+L + G ++IDDFGTGY++ L+ L A + Sbjct: 562 GVPASHLLCEITESVAMEDTRATQRAIEELGRIGVYLSIDDFGTGYSSLHYLRSLPARQL 621 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+D+ +V ++ LA A L VVAE VET+ Q+ +L + LQG+ Sbjct: 622 KIDRSFVRDLEEQEDARAVVDAVVRLAHALGLRVVAEGVETEGQRDILAAMHCDELQGFY 681 Query: 721 IGRPQPLA 728 RP P Sbjct: 682 FARPMPAD 689 >UniRef50_C8XC86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XC86_NAKMY Length = 1039 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 98/561 (17%), Positives = 194/561 (34%), Gaps = 24/561 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 RM Q + I ++G A + +++ + ++ + Sbjct: 460 RMAARRQAHQARFLDAILENIGSAVVACDAQGQVNLINLCTREMFNLPPAPWMPPPGIEQ 519 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + G+ + L+ ++ + + F + + L +L Sbjct: 520 PPVYHADGITPIPPDERPLSRSLRGELVRDVETVFGEPGADRRIVLSSAHRLQDEDGAVL 579 Query: 307 Y---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 ++ + QAL DPLT L N L Q + L Sbjct: 580 GAVLVMHDVTERRRVESALIRQALHDPLTDLANRALLGDRLDQAIARQQRQPEPFALLLL 639 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + ++ L + + + +L G E ++L L Sbjct: 640 DLDGFKLVNDSLGHQAGDQVLITVATRLRTSLWAEDTVARLGGDEFAVLLERTCDSQALA 699 Query: 416 HMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +L R + + + G+ +T + +L + Sbjct: 700 IAEQLLGVLRRPVQVHAHTITPDASVGVALSTGD-DTAESMLRNADLAMYAAKDAGKG-V 757 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDG 530 + + +++++ +R A+D+ ++ QPI + + G++ +L Sbjct: 758 VQVYRASMHESVLQRLIMDAELRLAIDEQQFSVHYQPIISLISGQLRGFEALLRWQHPVR 817 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQK 587 G + P F+PL L VL A SVNL + + Sbjct: 818 GDIPPSSFIPLAESSGLIVPLGGWVLREACSQAARWRRLFPPTRSLTMSVNLSVRQIQEP 877 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ + P + LEITE + + +LH G ++AIDDFGTGY+ Sbjct: 878 TLVATVLEALTDAGLEPGDLQLEITESTL-DQRNLILGVLHELHDKGIKLAIDDFGTGYS 936 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + RL L D +KID F+ +++ + A +V + +A + + AE +E+ Q + Sbjct: 937 SLSRLHTLPVDRVKIDRSFI-ELLAGSNPAPLVAATVAMAHSLGMQTTAEGIESADQLPM 995 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G QGY +GRP Sbjct: 996 LRMYGCDDGQGYYLGRPMSAE 1016 >UniRef50_UPI0001C3140A diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3140A Length = 1090 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 95/554 (17%), Positives = 187/554 (33%), Gaps = 27/554 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R I + + + + + + + G +V + Sbjct: 530 RAVIGALEEGLLIYGADGRVLSCNAAAVRIFGVDSEEELLGTVVAQGSPRVRMTYEDGSE 589 Query: 261 PFLNLTWAVSTLCLL-----NYNQNFLQGVETEYSLAFILAVL----ISFSVCLLYMVRI 311 + A L E L S + Sbjct: 590 VTRTNSTAGRALETGLPQPERVVHFERDDDGWELWATVTSHPLLREGESRPYGAVSAFTD 649 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + A D LT LPN L++ + + +D+ + + Sbjct: 650 VTERRRAQEQIAFLAYHDSLTRLPNRALLDEHLALALARARRAGESVALLYVDLDDFKAV 709 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMV 418 + G ++ I L +++ ++ L + G E L++L+ + + V Sbjct: 710 NDSLGHAAGDELLKRIAVRLRAVVRSSDLLARQGGDEFLILLTDLDKDPRLSAEAAAKQV 769 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 H + ++G + + L+ + + S Sbjct: 770 ETALIEPFHLADAEFEVGASIGISIYPDDAADADTLMRHADAAMYEVKQAGRG-GIASYG 828 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 S +T ++ L + +R AL + D +++ QPI ++ ++ + G++ P Sbjct: 829 GD-SRKTLARLSLTSKLRRALQREDFVVHYQPIVAPATGALHAFEALVRWQDAERGVVGP 887 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 ++F+PL L VL + + VN+ P L + + + Sbjct: 888 NEFIPLAEDAGLIEAIGGWVLNEVCRQQRAWHDAGMESHVHVNVSPRQLRRPDFPSTVRD 947 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + ++P + LEITE A +AE + + LH G R+AIDDFG G+++ RL+ + Sbjct: 948 ALEEQRLTPSMLTLEITESAAMLDAERANPIVRALHDLGVRLAIDDFGAGHSSLARLRDV 1007 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +KID F++ + + A ++ +I +L A + VAE V T Q+ L Sbjct: 1008 PVQTLKIDQSFLRGVPDDRQAAAMITAIIELGTALGMVTVAEGVTTDAQRRFLVDGDCPL 1067 Query: 716 LQGYLIGRPQPLAD 729 QG+ RP D Sbjct: 1068 AQGFHFARPLTADD 1081 >UniRef50_UPI0001AEC71A response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC71A Length = 701 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 103/562 (18%), Positives = 210/562 (37%), Gaps = 19/562 (3%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 L R+ + + + ++ + L E + + + Sbjct: 130 KLARVNHELEAEKKQLAITLKSIADGVISINAAGDVTFINPVAQRLTGYSETEALGKPID 189 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 V + +L P L + + ++YN + + + + +I Sbjct: 190 EVMNLRDASTNERLLNPALYALEVMRPVA-MSYNATLVSRHNQVFRVEDTASPIIDEDGH 248 Query: 305 L---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 L + + + + + + D LT LPN L + + Sbjct: 249 LSGAVIVFQDVSEAIEMAVKMTHLTNHDQLTGLPNRVLLHDRVVQAITRCFTSKQSIALL 308 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + IDN ++++ G + + I SI + L ++ E+ L ++ G E +L+ + Sbjct: 309 LIDIDNFKYLNDSLGHQVGDYIIASIAKRLAKVVGESATLARVGGDEFACLLTEIGSGYS 368 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + I + + + + + ++ +S + Sbjct: 369 ADSIAMACLQAGREPIDIDGKAHQLSLSIGISLYPQDAVNAEEMMRHADSAMYRSKSKGK 428 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + +V + +R A++ L +Y QP + + ++ Sbjct: 429 D-TFSFFSKDLQHAMHHRVEMEVKLRNAIENDSLAIYLQPKYNFDDSAVLSAESLVRMFD 487 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 +G ++ PD+F+PL + L + QVL+ +++A + + +VN+ L Sbjct: 488 ENGKVIGPDEFIPLAEETGLIHQLGKQVLQKSCEFVARCNELGQDFKVAVNVAAKQLSNP 547 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 A + + I+ ++ LE+TE + E + + L G IA+DDFGTGY+ Sbjct: 548 GFAKEVAEIINEAGIAASSIELEVTESALMHDFEQTRDILNDLASLGVTIALDDFGTGYS 607 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L++ +++KID FV D+ IV +I LA + L++VAE +ETQ A Sbjct: 608 SLSYLRQFPLNVLKIDRSFVIDMDKEQQAHDIVTAIVHLALSLELTIVAEGIETQSHFAA 667 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L LG QGY + RP +AD Sbjct: 668 LKALGCHLGQGYFMCRPMAMAD 689 >UniRef50_Q15PZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PZ4_PSEA6 Length = 590 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 94/461 (20%), Positives = 174/461 (37%), Gaps = 30/461 (6%) Query: 297 VLISFSVCLLYMVRI-YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 ++ V + + + H A D LT LPN + L Q + Sbjct: 114 PILGERVKYILRASQAFADLVTQQQELHQLAFYDSLTGLPNRQYLMQDLKRFLAMAKRNK 173 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ------------ 395 + + +D + ++ G +R + L +++++ + Sbjct: 174 YQAAMLFIDLDRFKRINDTMGHSYGDKLLRKVAHRLQANLRDSDTFARVAAEKNKEAPQL 233 Query: 396 --LPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 G E + LS + + S + + F + E Sbjct: 234 SSFGGDEFTIFLSRLNDPNEAMLVAERVIRSFSTPFQLEQYEVVVTPSIGISTFPNDGED 293 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL + ++ ++ + ++ L +R AL +++ + QP Sbjct: 294 AETLLKNADTAMYFAKQSGR-CCYKFYQDSMNSKAAARLQLEQDLRQALKSNEIVPFYQP 352 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 G + ++ L GGI+ PD+F+P+ + L VLE Sbjct: 353 QVCAKTGRIVGVEALVRWLPLKGGIIPPDEFIPIAEETGLINELGRLVLEQGCYQAKQWL 412 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R ++N+ Q + + ++ + + P + LE+TE S+AE ++ + Sbjct: 413 DSGHSVRMAINVSAHQFRQLDFTQTVAKVLAQSQLPPSLLELELTESVIMSDAEENIARL 472 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G +A+DDFGTGY++ LKR DI+KID F+ D+ + D IV +I LA Sbjct: 473 VELKSLGVSLAVDDFGTGYSSLSYLKRFPIDILKIDRSFMCDVNSAPDDVAIVEAILALA 532 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +L V+AE +E Q +L LQGYL RP Sbjct: 533 ESLTLGVIAEGIEYCSQITILKNTSNLLLQGYLFSRPVAAD 573 >UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKZ2_PSEU5 Length = 886 Score = 588 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 113/582 (19%), Positives = 202/582 (34%), Gaps = 48/582 (8%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL-AALSVLLLLLCTPYENDFI 239 +L+R I ++ R ++ T + + Y Sbjct: 303 RAVVWLSRDITDRVNTELERRIAAIAFESQQGMLITDAQNRILRVNGAFSRISGYSAAEA 362 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 G + G+ F W+ + + + + ++ + Sbjct: 363 IGQTTALL------ASGRHGPDFYRSMWSSIEATGVWEGEIWNRRKSGEIFPEWLTISAV 416 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + R H A DPLT LPN R L Sbjct: 417 RNVHGEVTHYVAAFTDITDRKAAEERIHNLAFYDPLTGLPNRRLLLDRLHQAMAVSRRSN 476 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +DN + ++ +G +R L ++ ++ + +L G E +++L Sbjct: 477 QLGALMFIDLDNFKNINDLHGHQTGDQVLRVAAERLHAEVRASDMVARLGGDEFVVMLEN 536 Query: 408 PET-----EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + +H+ L R N GL F G + L+ + Sbjct: 537 LGDDPLRAAAQAEHIGMKLLNSLDRSYRLNELGLYSSASIGVVLFGGEACSSDELMKRAD 596 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGE 517 ++ AL + + +++ L IR L G+ +L QP N Sbjct: 597 MSMYEAKISGKN-ALRFFDPRMQLAVQERLRLEAGIRQGLKNGEFVLSFQPQLEQNAGVI 655 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRF 575 G + ++ G+++P F+ L DLQVL+ LA Sbjct: 656 GAEALVRWQHPQRGLLSPAAFIAQAEHAGLIHALDLQVLQQACGQLARWAATPAFADLTL 715 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF--------SNAESSMYNI 627 SVNL L Q + +++ L +R +P N ++ + Sbjct: 716 SVNLSAHLLYQDHFVEKLLDLLERSGANPAR--------LKLELTETLLLDNMPEAIARM 767 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L + G R +IDDFGTGY++ L++L D +KID F++ + + IVR+I LA Sbjct: 768 TRLKQHGIRFSIDDFGTGYSSMSYLQQLPLDELKIDQTFIRRLPDDASSLTIVRAICALA 827 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VE+ Q+++L G QGYL G+P P + Sbjct: 828 SGLGLEVIAEGVESGAQRSVLLGNGCHRFQGYLFGKPMPAME 869 >UniRef50_Q2W603 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W603_MAGSA Length = 962 Score = 588 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 104/668 (15%), Positives = 213/668 (31%), Gaps = 42/668 (6%) Query: 102 AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDAD 161 R + ++ + + I ++L PL+ + +A Sbjct: 282 GWAVIATIPTSVAFAPIRRLEFEIYQDAALASVIIAVLLWLFVRRQLRPLEHAAGMLNAM 341 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 A + + + + R + S Sbjct: 342 ATGSRPLSPLPVEGGPEIRQMLDSFNKFHERIKAQKQSLRDNAEQLQLAASVFDGTSEAI 401 Query: 222 ALSVL-LLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 A++ L++ + GY + + + +++ + Sbjct: 402 AITDAEGLIVSVNKPFCRLTGYELEELVGRNPNILKSGRHDSDFYAEMWRSITATGNWSG 461 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + Y ++ + + + + + QA D LT L Sbjct: 462 EVWNRRKNGEVYPERLTISTIYDAKGQIQRRVAIASDITEQKKAEEIIWHQANHDLLTGL 521 Query: 335 PNFRALEQAPEQEAGKS---------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 PN R ++ ++ + +D + ++ G + + + R + Sbjct: 522 PNRRRFLDLLRKDLARADSLPDMVVGVLLIDLDRFKEVNDTLGHAIGDQLLLEVARRIRS 581 Query: 386 LMQENEKLYQLPGSELLL-VLSGPETE--GRLQHMVNILNSRQIHWNNTGLDMGYGAAWG 442 + E + + L E ++ ++ T + ++ + + L + Sbjct: 582 CLSEKDVIGHLGADEFIVSMIDDLSTTRLEAAVAAIRMVIAEPFRSGSDTLHLTASIGIT 641 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + ++ LL + ++ + E + ++ L N +R AL +G Sbjct: 642 AYPTDGGDMEELLRNVDQAVREAKNGGRDRS-CCFTESMREAGQTRLQLANDLREALSEG 700 Query: 503 DLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 +Y QPI + + +L + G ++P F+P+ + L V Sbjct: 701 QFEVYYQPIIDMPSRAIVKAEALLRWRHPERGFVSPTIFIPIAEETGLICDIGNWVFRQA 760 Query: 560 LKWLATHPC---------------DKKG----PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +VN P + Sbjct: 761 AATARRLCDSCRYVVGGICRKDDIAGPSTPCRFQIAVNKSPRQFFSGFSHLEWAEHLREL 820 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 +ISPQ + +E+TE M + + G +IA+DDFGTGY+ LKR D I Sbjct: 821 NISPQCISIEVTEGLLLGQHAEVMERLTKFRAAGMQIALDDFGTGYSAMSYLKRFDIDYI 880 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+D+ ++ D I +I +A + VVAE +ET++Q ALL G + QGYL Sbjct: 881 KIDQSFVRDMTVDSSDRAIAEAIIAMAHRLGMKVVAEGIETEEQYALLAAAGCDFGQGYL 940 Query: 721 IGRPQPLA 728 +P P+ Sbjct: 941 FAKPMPVD 948 >UniRef50_A9BVR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BVR1_DELAS Length = 828 Score = 588 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 107/551 (19%), Positives = 199/551 (36%), Gaps = 27/551 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCT------PYENDFIAGYLV--PVFFIIFTLG 254 A + + A + + + + P + G V +F Sbjct: 241 AEAQTQAGLELAARVFESSLDGIFIADGYMDVARTNPACERLLGGMPVQGRTVESLFEAS 300 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRI 311 G+ + Q ++ L + ++ +R Sbjct: 301 EGQADTLGDLARIQWHQGGFWEGDLWLRQAGGARCAVRLSWVPLRNAQGDVVQSIGFMRD 360 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFM 363 + +R A +D LT LPN L + + + + +D + + Sbjct: 361 LTQQRVAQQRIEQLAYSDALTGLPNRLNLTERVDAAIEAARAGGTVFSILFIDLDRFKII 420 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G ++ + + L M+ + L +L G E +L L G + + Sbjct: 421 NDSLGHQFGDRVLKLVAQRLSDCMRPVDILCRLGGDEFVLYLQGCNA-ELAASVARRILQ 479 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + G + ++ + TL L+ Q + + Sbjct: 480 EMERPFLLDGLGFSVQCSIGVAQYPADGLTLDELIRQADTAMYRVKERGRGH-FSFYQPQ 538 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 +S ++ L + +R AL+ G + +Y QP + + +L + G+++P Sbjct: 539 MSAGLLSRMKLEHAMRQALEHGRMAVYFQPQVHIDSDRIVAAEALLRWTDPEFGVVSPGV 598 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+PL + V+E ++ A + SVN+ L Q R+ L Sbjct: 599 FIPLAEESGYIVTLGAWVMEQAVQEAARWQQQGMPIKVSVNVSALEFRQSGFVERVTELL 658 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + Y ++PQ + LE+TE +A+ + Q+ G + IDDFGTGY+N LK+L Sbjct: 659 RSYGLTPQLLELELTESILLQDAQDMALRVCQIADLGVGMVIDDFGTGYSNLAYLKKLPI 718 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 IKID FV+ + ++ D IV +I L A + +VAE VET +Q +H++ Y Q Sbjct: 719 SKIKIDQSFVRGLPSDEGDQAIVGAIISLGLALGVEIVAEGVETHEQLTAIHRMQGHYFQ 778 Query: 718 GYLIGRPQPLA 728 G+L P Sbjct: 779 GFLCAPGLPRE 789 >UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZJQ2_THASP Length = 1050 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 119/570 (20%), Positives = 213/570 (37%), Gaps = 28/570 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL---SWLAALSVLLL-----LLCTPYEN 236 + R + DI E+R + ++L+ ++ Sbjct: 454 AVRRDADGRALLLTGAQIDIDRRKENEERLRLAASVFSSSYEAILITDVDNRIVDVNPAF 513 Query: 237 DFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 I GY + R + + A+ + +E++ Sbjct: 514 CRITGYSREESLGRDPGMLASGRQGREFYRAMWQAIEEHDHWQGELWNRRKDGSEFAEVL 573 Query: 294 ILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 ++ + + L M R + + A DPLT PN R L+ Q Sbjct: 574 SISRVRDARGRVIHHLAMFSDISRLKKHEEELNRIAYFDPLTGAPNRRLLDDRLRQAIAH 633 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + C + +D + ++ G + I L +++ ++ + +L G E + Sbjct: 634 SRRTGKPLAVCVIDLDGFKPVNDQLGHEAGDQVLIGIVDRLGAILRASDTVARLGGDEFV 693 Query: 403 LVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 L+L E E L+ ++ + I + + + F + LL Sbjct: 694 LLLEDIEGERVLERVLEAI-RTPIALASQQVCVSASIGVTLFPEDDADPDTLLRHADQAM 752 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGY 519 ++ + + V Q + L + AL + + +L+ QP + G Sbjct: 753 YRAKQRGRN-CIQFFDASVEEQQRVRKERLERLDQALRRQEFVLHFQPQVDMVDGRPLGM 811 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + +L + G++ P +FLP + L R V++ L L SVN+ Sbjct: 812 EALLRWQHPERGLLAPGEFLPDLEGTELETRLGQWVVDHALGALERCRAAGLDIGVSVNV 871 Query: 580 MPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 P L+Q + +R+ I P+ + LEI E A + +M +E H+ G RIA Sbjct: 872 GPGPLMQAGFVASVRSALERHPDIPPERLELEILESTALDDMVLAMDVLEACHRLGVRIA 931 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGYA+ ++L D +KID FV D++ + IV ++ LA+ V+AE Sbjct: 932 LDDFGTGYASLRHFRQLPFDRLKIDRSFVLDMLEDGEARAIVGAVVQLARTFGREVIAEG 991 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET A L LG + QG+ I RP P+ Sbjct: 992 VETPAHAAALLALGCRLGQGFGIARPMPVE 1021 >UniRef50_B5ZD56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZD56_GLUDA Length = 710 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 109/662 (16%), Positives = 221/662 (33%), Gaps = 26/662 (3%) Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFF 147 +ML + ++ Q G ++ L+ + + + F Sbjct: 40 LMLVAVVDEGGAPIGLVERQAFFAKVSGQFGHALFAGRPVALLMDDRPVIVDAAVSSTDF 99 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL--WRRDIA 205 + V L T + + + + + + + R+ Sbjct: 100 TSMTITAQSSDVLRGYIVVAGGRYLGTGTALDLINASHSNAVASAANLHETAEELRKANR 159 Query: 206 PSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 L + T+ ++++ L+ + + G Sbjct: 160 KILRDKLFMDTIVENIPSALVVRSVRDDRLVLINRAAELMTGRERSELVEHTAADAFTET 219 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISFSVCLLYMVRIYHRSE 316 L T ++A +A + L + Sbjct: 220 EIGHALVHPEGTRREGVSESLLRNRAGDMRAVATRYVTIADERGDARWELCVADDVTERR 279 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMR 372 ++ A DPLT L N + C+ +D + ++ YG Sbjct: 280 QARQQVERLAHYDPLTGLANRALFGARLDGVCVAGHEAILLCIDLDYFKTVNDLYGHAAG 339 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN 429 +R + L + ++ + +L G E ++ + L H + SR + Sbjct: 340 DALLRLVADRLRACSRPDDLIARLGGDEFAIIWPNVPEKEELAHRAGEIVETISRPYVID 399 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 + +G + + + L ++ A S + +S + + Sbjct: 400 GQHVAIGASIGSASYPADAGSSDLLRQHADIALYKAKALGRN-CFHSFDAGLSYEMRNKA 458 Query: 490 LLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 L + +R A+ + L+ QP+ + + + ++ G++ PD+F+ L + Sbjct: 459 RLGDELRAAIGSSQICLHFQPLYTMPDNQIAACEALVRWNHPVRGMIPPDQFIGLAEENG 518 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 L VL + + P + +VN+ P+ + + P Sbjct: 519 LIHELGEWVLRAACREAVCWP---PHVKVAVNVSPVQFRNSRFMAIVQSALMEAGLVPHR 575 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + +EITE N+ + + QL G + +DDFGTGY+ L+ IKID F Sbjct: 576 LEVEITENIFVQNSAVNRDILRQLADMGCSVVLDDFGTGYSALSYLRLFSFQKIKIDRSF 635 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 VK++ + I+++I LA++ + AE VETQ+Q A LH +G QG+L+GRP+P Sbjct: 636 VKELPEKSASG-IIQAIVSLAQSMDIPTTAEGVETQEQWARLHAMGCSEAQGFLLGRPEP 694 Query: 727 LA 728 +A Sbjct: 695 VA 696 >UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6G7_9BACL Length = 700 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 124/688 (18%), Positives = 241/688 (35%), Gaps = 39/688 (5%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 V+ + + L ++ T ++ + + C + + + + T + Q Sbjct: 15 VIGLAAMIGVVQLSAWNGYPPGTDAVVQTLHLLAGLMCLAVSFAIFAQGWILFTDKLSKQ 74 Query: 124 RLFWLGLVTPIGI--KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY-- 179 RL+ L + IGI L G + S + + + + Sbjct: 75 RLYTAVLFSMIGILDILYTVLYGDISLLGFEPSGNLATWFLVISHLLGAFGMLRIFAATD 134 Query: 180 --------NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 +F + ++ F ++ + E L L LL+ Sbjct: 135 QQVSGQQKVTMFVSAVLVTLAGLFVLNRYQDRLPTLFETELLQLVLQAGIPLLYLLVAAA 194 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 Y + + + +L + + L Q ++ Sbjct: 195 VLYRHRA--ERPPAMMTVTRSLLFMAMGHVLLTCPPGHVEGLTQAAGQWYMGISYYIVLK 252 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 + L + + A D LT LPN R +++ ++ Sbjct: 253 GVYRLTIEEPLRGKLLV----------EAQMKHMAYHDDLTGLPNLRQMKEQLDELLGFT 302 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 A + ID + ++ G + + L L + +Y++ E +V S Sbjct: 303 RACIGVAVINIDRFKAINDSLGYSAGDKVLTELGSRLAVLEGPQQWVYRMGEDEFAVVFS 362 Query: 407 GPETEGRLQHMVNILNSR--Q-IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + L + + ++T + F + +++ L+ Sbjct: 363 ELPDAAAAEDRAKQLLASVDPGVLIDDTEYHISLSMGLSVFPNDADSVNELIQFADMAVH 422 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 + + + +T +V L N +R AL++ + L QP + G + Sbjct: 423 HAKEQG--VEFLRYHAAMKQRTQAKVELENDMRKALEREEFFLEFQPQIRLDTGKMVGME 480 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNL 579 ++ G++ P +F+PL + L VL++ ++ D SVNL Sbjct: 481 ALVRWNHPKRGLIPPSEFIPLAEESGLIVPLGEWVLKTACQYNKKWQMDGFEPVCVSVNL 540 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q N+A + + + + PQ + LE+TE + E+++ + +L + G I+I Sbjct: 541 SMRQFRQYNLAEHVNAILREVGLDPQYLELEVTESMT-YDIETALDQLHRLKRLGIHISI 599 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK L D +KID FVK+++ + DA IV +IT +A L V AE V Sbjct: 600 DDFGTGYSSLYYLKSLPIDRLKIDRAFVKEVMYDGNDAAIVSTITTMAHHLKLKVTAEGV 659 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPL 727 E ++Q L + QGYL +P Sbjct: 660 ENEEQLEFLKRQRCHEGQGYLFSKPVSA 687 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 109/471 (23%), Positives = 184/471 (39%), Gaps = 33/471 (7%) Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN--- 336 +GV + LA ++ + ++ + + R QA D +T LPN Sbjct: 374 EIQRGVREWSTDELKLAEVLGLHLYMIVIQQRLTRL------IRHQASYDVITQLPNGII 427 Query: 337 ---FR--ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 AL A Q L ++ + ++ G + + + L + + Sbjct: 428 FNHRLSLALVDAVNQGNMLGVVILDLNQFKRINDSLGHGVGDFLLTKVRDRLQNAL---D 484 Query: 392 K-------LYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAW 441 L + G+ +++LS + L + + + +G Sbjct: 485 TYSIFNPLLARWHGARFIILLSKLSYSDESVMVCQKLLNDFQEPFYVQSQAIYLGASLGI 544 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + +T + LL ++ S +++L +R A+++ Sbjct: 545 ALAPYDGDTAEILLKNAESAMYEAKKQGKN-TYQIYRPG-SDHDKNKLILEADLRKAIER 602 Query: 502 GDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + +L+ QP + + G + ++ G+++P F+PL + L VL + Sbjct: 603 NEFVLHYQPQIDLNTRKLIGVEALIRWQHPSLGMVSPALFIPLAEETGLICPLGEWVLRT 662 Query: 559 LLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + +VNL L Q +I RI + K ++P + LEITE Sbjct: 663 ACHQYRIWQKAGFPKIQMAVNLSAFQLQQDDIVARIAMILKETGMTPSDLELEITETTVM 722 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 N E +EQL + G +IAIDDFGTGY++ LK L D +KID FV+DI ++ DA Sbjct: 723 ENLEQMTAILEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVDTLKIDKSFVQDITLDSNDA 782 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + I L KA L V+AE VET Q L L QGYLI RP Sbjct: 783 KLCQGIIMLGKAFELDVLAEGVETFTQLEFLRSLNCDRAQGYLISRPLAPD 833 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 20/181 (11%), Positives = 54/181 (29%), Gaps = 16/181 (8%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALE-------QAP-EQEAGKSFCCLRIDNLEFMSR 365 + E N + D LT + N + + + S +D+ + + Sbjct: 1084 QLESANLELKKLSCLDGLTQVANRHRFDMYLDQEWRRLMRSQQFLSLILCDVDHFKGYND 1143 Query: 366 HYGLMMRVHCIRSICRTLLPLM-QENEKLYQLPGSELLLVLSGPETEGR---LQHMVNIL 421 YG + C++ + + + + + + + + G E ++L G + + + Sbjct: 1144 TYGHLAGDQCLQQVAQVIKNAVGRPADLVARYGGEEFAIILPDTPLRGALYVAEQIRQQV 1203 Query: 422 NSRQIHWNNTGLD-MGYGAAWGRF-DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 I + + + F + + L+ Q+ A+ Sbjct: 1204 QYLTIPHPQSTHQWVTLSSGVASFIPSAALSPKALINAADEALYQAKANGRNQV--VFSP 1261 Query: 480 M 480 Sbjct: 1262 S 1262 >UniRef50_Q0AIM6 Diguanylate cyclase/phosphodiesterase n=35 Tax=Betaproteobacteria RepID=Q0AIM6_NITEC Length = 706 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 124/677 (18%), Positives = 234/677 (34%), Gaps = 43/677 (6%) Query: 89 MLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFD 148 L + VV + L R + L IGI ++ F Sbjct: 8 WLVGLSLVVAMLASYTALDLSGHISVLTRPRLRYTWLAGGAAAMGIGIWSMHFVGMLSFS 67 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI--------------VSPH 194 P + F + LLS ++ +I Sbjct: 68 LPTPLGYDFVTTGYSLVIAMLLSYSVLYVVTQTKLTISRLLIGGTLMGFGISGMHYTGMA 127 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 ++ P L ++ A + +L + +A + F + + Sbjct: 128 AMEMQPAIHYDPLLFVTSIVIAIAAANAALWIAYILSDADQVHLVAKRIGASFLMGIAIT 187 Query: 255 VGKLR------YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM 308 +P + + + + + + L+ + + L Sbjct: 188 GMHYTGMAAAYFPPGSTSSTANDIDSQWLATTIILLTFLILIITLTLSRYDARANFLTGS 247 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNL 360 V LN + A D LT LPN L + + + +D Sbjct: 248 VS------RLNDQIVRMATFDALTDLPNRWTLIERMERAIEISRRDGNMFAILFMDLDGF 301 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G +++ LL ++ ++ + +L G E + +L T M + Sbjct: 302 KIINDSLGHSTGDEVLKAFALRLLHCVRGSDTVARLGGDEFVALLENIATTDDASEMADS 361 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + S + + NN L + F + +T++ LL ++ Sbjct: 362 ILSRMRQGLWANNQPLQVMPSIGITLFPQDGDTVEKLLKNADAAMYEAKRGGR-STYRFF 420 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 E ++ T+ + + + AL G LY QP N E G + +L + G+++ Sbjct: 421 ETSMNEAATRALQIQRVLHEALKVGYFSLYFQPKFRGSNSELVGAEALLRLRHPEFGLLS 480 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ + V+ + L D + ++NL P L Q ++ + Sbjct: 481 PMEFIPIAERSGQIIPIGYWVVRETCQQLRRWKEDGLPAIKVAINLSPRQLEQPDLITMM 540 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + + I + ++ EITE A +A + I + + F IAIDDFGTGY++ L+ Sbjct: 541 LDIVQSEQIPCEQIMFEITETVAMQDAPKTTDMIHKFQENNFEIAIDDFGTGYSSLAYLQ 600 Query: 654 RLQADIIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 R +A +KID F + + IV +I LA + VVAE VET Q L + Sbjct: 601 RFRAKQLKIDRFFTSGMDECGPEGSAIVSAIIKLAHTLGMDVVAEGVETDSQLTKLKSMM 660 Query: 713 VQYLQGYLIGRPQPLAD 729 +QG+L+G+P + Sbjct: 661 CDEVQGFLLGKPVTADE 677 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 98/420 (23%), Positives = 173/420 (41%), Gaps = 20/420 (4%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMM 371 + D +T LPN L +Q ++ + ID + ++ +G Sbjct: 133 QELAYLTHFDKVTDLPNRLLLTDRLQQAMFQADSYQGIVSILYMDIDRFKQVNDSFGHAG 192 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---ETEGRLQHMVNILNSRQIHW 428 +R + + + + + + + G E +++L G + G + L+S + Sbjct: 193 GDEVLRRVAERIGACVGKADTVSRWGGDEFIVLLPGQSAGDAAGVASAISRALHSLIVLG 252 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + L + + + L+ Sbjct: 253 GSRELFVSCSIGIAEYPHKGGDIDALINSARSAMSAIKEQGGN-NYRHFVAGGDQAFDDG 311 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L ++R AL Q LY QP + G + +L G++ PD+F+PL + Sbjct: 312 LELETSLRQALGQKQFRLYYQPQIDIVSGRVLGLEALLRWHHPTQGMIAPDRFIPLAEKT 371 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L VL +AT + G + +VNL QK++ I R+ + P Sbjct: 372 GLIIPIGEWVLREACSQVAT----QHGLKVAVNLSARQFHQKDLVAMIRRILDETGMPPV 427 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LEITE + E ++ +EQL+ G +++DDFGTGY++ LKR D++KID Sbjct: 428 NLELEITESALIYDVELAIATMEQLNDLGVSVSLDDFGTGYSSLSYLKRFPIDMLKIDKS 487 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F+ ++ T+ +IV++I +A + L V+AE VET+ Q +L + G QGYLI RP Sbjct: 488 FIDEVTTDPDSNVIVKTIIVMAHSLGLKVIAEGVETK-QLTMLREHGCDQAQGYLIARPL 546 >UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax sp. JS42 RepID=A1W268_ACISJ Length = 1108 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 105/571 (18%), Positives = 201/571 (35%), Gaps = 25/571 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT----LSWLAALSVLLLLLCTPYEN 236 + + + RR A + + + ++ + E Sbjct: 525 PRDAQALQTVADALWKHTAQRRQEAVIHRLSEALDQSPSPVVITDIDASIVYVNKAFSEV 584 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 V R + ++ + + Y+ L Sbjct: 585 SGYGAQEVLGRNPRVLQSGLTPRTTYADMWTKLPRGLPWQGELINRRKNGQVYTENASLY 644 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------- 346 + + + + R + D LT L N +A ++ Q Sbjct: 645 PVRDVFGEVTHYVAHMEDITQRREAEERIRALSNYDTLTGLLNKKAFDEQLTQAIDRADA 704 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 S +DN + ++ G + + L + + + + G ++ Sbjct: 705 SHERVSVLWFDLDNFKLVNETLGHAAGDELLLEMGNRLRACLAPHIPVARYSGDAFTAIV 764 Query: 406 SGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + + ++ + + + + A + + T L Sbjct: 765 P-LADQAAVALLAQDALAQLQTTLQIHGHAVSVSASAGIAVYPDDARTASTLASAAEVAM 823 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 + L + T + + L ++ A +G+L L QP R + G Sbjct: 824 YRVKQDGRN-GLRFFAPEMQAHTQRSLELAAGLKDAAHRGELFLVFQPQRTLGSGALAGA 882 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + +L G+++P +F+P+ Q D V+E + + L +VN Sbjct: 883 EALLRWRHPRWGLVSPAEFIPIAEQSGSIVAIDFWVVEQVAQQLRAWDAAGLPPLVVAVN 942 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + + ++R+ +R ISPQ + +E+TE A N E + I +LH+ GFR+A Sbjct: 943 VSAAQFARPHFVEELVRILQRMDISPQRIEVELTEAVALKNPEQAETTIRRLHEVGFRVA 1002 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LKR D +KID FV+++ D IV +I +A + ++ +AE Sbjct: 1003 LDDFGTGYSSMSYLKRYAIDKLKIDQSFVRELAHQASDQAIVTAIIKMAHSLRMATIAEG 1062 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQ-PLA 728 VET +Q ALL G +QGY RP P A Sbjct: 1063 VETAEQAALLQACGCDEMQGYWYSRPLEPAA 1093 >UniRef50_Q07HD2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Alphaproteobacteria RepID=Q07HD2_RHOP5 Length = 1223 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 104/559 (18%), Positives = 202/559 (36%), Gaps = 24/559 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVP 245 I + + + + + +L F Y + Sbjct: 653 DITDRIRVKTELAQQAERLARTNMQFDAALTNMSQGLAMLDSQGRLVLTNKRFQEMYGLD 712 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL----AFILAVLISF 301 + L ++ L A ++ Y + V++ L + + Sbjct: 713 EEQLKPGTPAEDLVERYVPLFAASKSMVKG-YLARLSKDVDSVIPLLDGRIIRIRRAQTS 771 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----APEQ-EAGKSFCCLR 356 + E R+ A D LT L N L + A E + S + Sbjct: 772 DGGWVATHEDITAQERSARQISYLAFHDGLTELANRAELNKQGHLALESSDRPISVLLID 831 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-GRLQ 415 +D + ++ +G ++ + + L + + ++ G E ++ + + Sbjct: 832 LDRFKAVNDTFGHAAGDRLLQLVAIRMRALAGPKDLVARVGGDEFAILQAPCPDQREAAI 891 Query: 416 HMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + +G L+ Q + + Sbjct: 892 ALASRTIEVLRQPFDLGGKQASIGASIGIAVRSPQTVRFDDLIHQADLALYEIKSGGRND 951 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 L E+ + + +++ L N +R A+ G + L+ QPI + G + ++ Sbjct: 952 CL-LYEDSLGARAHERLELENDLREAIAGGQMELHYQPIVRLTDLRVCGMEALVRWRHPV 1010 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G+++PD F+PL + L + V+ A+ P + +VN+ P + + + Sbjct: 1011 RGLLSPDLFIPLAEETGLIVQLGEFVVNQACHDAASWPD---HVKVAVNISPTHIKGRGL 1067 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 G + ++ + + LE+TE E + + QL G +A+DDFGTG+++ Sbjct: 1068 LGTVTLALLNSQLATERLELEVTETVLMERDEDMLAELHQLRALGISVALDDFGTGFSSL 1127 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+ D IKID FV +I + A IV ++T LA+ + AE VET+QQ +L Sbjct: 1128 SHLRMFSFDKIKIDRSFVAEITERSDSAAIVCAVTGLARTLDIVTTAEGVETEQQMQILR 1187 Query: 710 KLGVQYLQGYLIGRPQPLA 728 G LQGYL GRP+P Sbjct: 1188 AAGCTQLQGYLFGRPKPAD 1206 Score = 43.4 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 7/102 (6%), Positives = 27/102 (26%), Gaps = 6/102 (5%) Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGV 285 +L + I+GY + +P F ++ ++ + + Sbjct: 58 ILHANDKFCEISGYSRDELLGQDHRLLKSGVHPDELFRDMYRVIAGGGVWHGEFCNRAKS 117 Query: 286 ETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHL 324 Y + + + ++ + + + + Sbjct: 118 GRLYWVDTTIVPRLDGRGKVVGYTSIRVDITQRKTMEEALRR 159 >UniRef50_Q7UUK0 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UUK0_RHOBA Length = 739 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 100/577 (17%), Positives = 204/577 (35%), Gaps = 48/577 (8%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLS---------WLAALSVLLLLLCTPYENDFI 239 + ++ Q+ + + E+R + W L L Sbjct: 163 VTIARISTQLQLKSALQRLRQSEERYALTARGTNDGMWDWNLVTGELYLSPRWRSMVGLD 222 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 P L + R A ++ + + L Sbjct: 223 GVSWTPHGSEWMDLIHHEDRRRVQLDLEAHLCGETDHFETELRMQDGHQTYRWMLCRGLA 282 Query: 300 SFSVC-----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------- 346 + + + D LT LPN ++ Sbjct: 283 VKDSHGTAYRIAGSLTDITEGKVA----------DALTGLPNRMLFNDRVQRCVDHQARN 332 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE-KLYQLPGSELLLV 404 + + + +D+ + ++ H+G + SI L +++++ + ++ G E ++ Sbjct: 333 PQNRFAVIFMDVDDFKLVNDHFGHDAGDDFLVSIASRLDTSLRKSDAIIARMGGDEFAVL 392 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETL------QPLL 455 L + L+ + + + + + E+ + LL Sbjct: 393 LENIRHVDEAVAVAMRLHDKMRAPFPVGDREILTRASMGIVVSEFDPESSVPQATGEELL 452 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 + + L + + + ++ L + +R +L++ +L L QP+ Sbjct: 453 VRADTAMYFAKNQS-ELPYAIFNDDMLAENMLRLELGSQLRHSLERDELALLYQPMVQLC 511 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KK 571 + + G++ +L + G ++P+ F+P+ L VL + + + Sbjct: 512 DGKTAGFEALLRWEHPEHGTVSPNTFIPIAESNGLIIEIGKWVLRKACQQAMQWQEEFGR 571 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 SVN+ L + + + P+ + LE+TE + ES++ + QL Sbjct: 572 PIMISVNVSVRQLSSTGFVEAVTETLEETKLQPECLKLEVTESFLMQDPESTIELLHQLR 631 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G I IDDFGTGY++ L R+ DI+K+D FV+ + + +A ++RSI LAK+ Sbjct: 632 RIGLTIGIDDFGTGYSSLSYLHRMPLDILKVDRSFVESMFDSEKNASLIRSILALAKSLE 691 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+VVAE VET Q L LG ++QG+ +P Sbjct: 692 LNVVAEGVETLAQLQRLQDLGCHFVQGFYFSQPVKPE 728 >UniRef50_Q3SJE6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJE6_THIDA Length = 758 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 118/652 (18%), Positives = 214/652 (32%), Gaps = 43/652 (6%) Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 ++ A++ + + L + I+ + F + Sbjct: 107 SLIANWAMIFRRADVAIDSLPQLKRRRVALVRGSVQAKALIRLAEQFDAPFKPVYVDDFP 166 Query: 156 FFGDADAIF--TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR 213 A + LF + R L R Sbjct: 167 AVVRALQERRADAGSVNRLFAVEYANQPGVVETAIVFSPVSVHYAAPRSADPALLDALDR 226 Query: 214 AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 SV + G L P + G G L + + Sbjct: 227 HLAELKADTDSVY-YTSLKRWLAAAPDGRLPPWLPWLIGGGGGALLLALAFVVLLRHKVG 285 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + + E + + E R + A D LT Sbjct: 286 RQTGELQ-RRADQLELEVE---------------------QREQAQRHLNRLAYFDGLTR 323 Query: 334 LPNFRALE----QAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN A QA + + +D L+ ++ G ++ I L Sbjct: 324 LPNREAFRLTLSQALRTLNGSGGRLALLFVDVDRLKNVNDGLGHRAGDMLLQQIAGRLQS 383 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWG 442 +++ ++ L + G E ++++S + + + L + + T + G Sbjct: 384 VLRGHDHLSRFGGDEFVVIVSEIVRDTDAERVAGRLLAALAAPVDIGGTQVYTGASIGIA 443 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + E+L LL Q+ + + +++ L +R AL++ Sbjct: 444 LYPEDAESLDGLLKHADTAMYQAKEQGGNR-YVFYHAQQTERAVERLTLDTRLRQALERN 502 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 +L+L+ QPI + G + ++ + G++ P F+P L VLE+ Sbjct: 503 ELVLHYQPIVELASGRIVGGEALVRWEDPERGLVMPSAFIPAAEDTGLIVALSDWVLEAC 562 Query: 560 LKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 L + SVN+ +++ + R R + P + LEITE Sbjct: 563 CTQLRAWQQQGRAADDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVM 622 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + ++ L G R+A+DDFGTGY++ L +L +KID FV+ I + + Sbjct: 623 LVMTDEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSE 682 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV +I LA+ + VVAE +ET QQ A L G ++ QG L+ PQ Sbjct: 683 TQIVTTILALARGLGMEVVAEGIETAQQYAFLRDRGCEFGQGNLMSTPQAAD 734 >UniRef50_C5D169 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Variovorax paradoxus S110 RepID=C5D169_VARPS Length = 723 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 106/708 (14%), Positives = 217/708 (30%), Gaps = 72/708 (10%) Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM 140 + L+ + LG +VL + L + + + L + Sbjct: 1 MRSLRVEIALGFGVVIVLMLALGASFYLSEQRSAAAIDKLLSSDNRMADLSLRSSLAMYK 60 Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 A L ++ +L L + P F + Sbjct: 61 ARDAENELLLSADRLGVAQASER----SLPAMQNHLLDMREYLASLRILSTDPKFRDQVD 116 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R + ++ ++ + A + + T + Sbjct: 117 RIETQTRQYEDGFLAFIARHGKEGLPESADALRQGYLATAVAIESSVEALHTEATKRALQ 176 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM-----VRIYHRS 315 ++ A L + + + + + L+ + Sbjct: 177 TRSDVERAARFSRWAVIALVALAILLSAAAATVVSRRITGSIARLVAFSGRVAAGDFSAR 236 Query: 316 ------------------------------EWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 E QA DPLT LPN LE Sbjct: 237 TPQGHADEFGILASAMNQMAESIENSNALLESSADTLKHQATHDPLTGLPNRALLEDRLR 296 Query: 346 QEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 Q + + +D + ++ G ++ + + ++ + + + Sbjct: 297 QAISYADRYGRLMTVVFINLDGFKRINDSLGRKGGDELLKVMAERMARCLRSVDTVVRTG 356 Query: 398 GSELLLVL-SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++L P + + L ++ + + + + + Sbjct: 357 GDEFVIILYDQPGDGTDIAPALRKLLETIAQPARIGSQAVQLTGSMGVATYPADGADADA 416 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL + A + +SG ++ L +R A+ + + L QP + Sbjct: 417 LLVNADAAMSHAKASGRN-NFEFYAAEMSGAIRDELALREGLRHAVARSEFHLAYQPQLD 475 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 G + ++ + G+++P +F+PL + L VL + Sbjct: 476 MESGRVTGVEALIRWQHPERGLVSPAQFIPLAEETGLIVPIGEWVLRTACFQNKAWQDAG 535 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ--------AFSNAE 621 SVN+ ++ + ++ + + P+ + + Sbjct: 536 LPPFIVSVNVSARQFRERTLIAQVALALRDSGLEPRL--------LELELTESLVMEDLD 587 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 ++ +++ L G +++IDDFGTGY++ LKR +KID FV+DI + D I + Sbjct: 588 KALQSMKALRAMGVQLSIDDFGTGYSSLSALKRFPIARLKIDQSFVRDIPGDEEDKAIAK 647 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I L +L V+AE VET+QQ L G +QGYL RP P A+ Sbjct: 648 TIIALGHELNLKVIAEGVETEQQLEFLRAHGCDEMQGYLFSRPVPPAE 695 >UniRef50_A4ADN7 Sensory box EAL/GGDEF family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4ADN7_9GAMM Length = 796 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 105/565 (18%), Positives = 208/565 (36%), Gaps = 57/565 (10%) Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 +++ ++ L L T + I ++ +F+++ ++ P L + Sbjct: 199 VEISSTALWSLTLPTVALSSGIGLVVLFLFWLLTRSITRRITAPLGMLAQVADDIASGKQ 258 Query: 278 NQNFL-QGVETEYSLAFILAVLI----------SFSVCLLYMVRI-----YHRSEW---- 317 + +G +A +L +I +L M R + Sbjct: 259 TEPLRIRGSGEVRDIAEVLNGIITGLHSYTRQMDTDRKMLSMKVDERTEQLSRRKEELDS 318 Query: 318 LNRR-------WHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 ++ A D LT LPN + + + IDN + Sbjct: 319 AEQKVTETRSKLRHAAYFDNLTSLPNRKLFTEQLTLLLRLAQRGNQNVGLLHVDIDNFKR 378 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKL-------------YQLPGSELLLVLSGPE 409 ++ G +R + L +++++ L +L G E +VL+ E Sbjct: 379 INDSLGATAGDQLLREVSERLAAGVRDSDVLHRGTDDESSLMDLSRLGGDEFTVVLNHIE 438 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + L + + + + + ++ LL + + Sbjct: 439 SIDMAKRVADRLASSIAEPYLIDRQEVIVSSSIGIALAPDHAADVETLLRAANTAMVNAK 498 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 + ++ + +++ L N +R A++ LLL+ QP + G + ++ Sbjct: 499 KRGRNRVV-IYDDSMESANRERLQLENDLRRAVELDQLLLHYQPQVDALDGRVTGAESLV 557 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPL 582 G++ P K++P+ + L VL L SVN+ L Sbjct: 558 RWNHPKQGLIPPFKWIPIAEEMGLIEDVGEWVLRRACADLVELRAQGHSLPKVSVNVSAL 617 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + + + + P+++ +E+TE SN ES + ++ L G R++IDDF Sbjct: 618 QFHDE-FVATVSSALQDSGLPPESLEVELTEGIMVSNQESVVSMVQNLKDLGIRLSIDDF 676 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L R D +KID FV + + D +VR+I +AK+ L +V E VE Sbjct: 677 GTGYSSLSYLTRFPLDELKIDRSFVLGLAKGSQDVELVRAIIAMAKSLGLEIVVEGVERM 736 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 + GV +QG+L +P PL Sbjct: 737 EDLEFFLGQGVSVIQGFLFSQPVPL 761 >UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXR7_HALHL Length = 749 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 117/641 (18%), Positives = 206/641 (32%), Gaps = 32/641 (4%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 Q L V + + P + A+ V + S Sbjct: 102 LLAPGGDLTGQLLSDFVAVDAQDALYLHWRALTAARAPQAVELTLAWAEGASCAVRMESS 161 Query: 173 FTAVLIYNM-LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + F I ++ R E + + Sbjct: 162 VEPTADRSPCRFRCALMDITERRRSEEQLRIAARVF---EDAGDAIVVTDPDG---HVQT 215 Query: 232 TPYENDFIAGYLVPVFF----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 I GY ++ + Sbjct: 216 INNAFTRITGYTEGEALGNTVCALLDSGRHSEAFHKEKQESLDRSGYWQGEIWHRRKGGE 275 Query: 288 EYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 Y + + + + + + + + R A DPLT LPN + Sbjct: 276 LYPEWLTINRIDDATGQPQHFVAVFSDITQLKDAHSRSEYLANHDPLTGLPNRSLFQDRL 335 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 E L +D+ + ++ G + + + L L+++ + + ++ Sbjct: 336 QQAIAQTQRHEGQVGLMFLDLDHFKTINDTLGHEVGDELLVQVAERLGELVRDVDTVARI 395 Query: 397 PGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +VL+ + + L + L A + + E + Sbjct: 396 GGDEFTVVLTDC-DPEEVGSIAQRLVEGLGGTFVVDGRELQATPSAGLALYPRDGEDVHT 454 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L ++ L E + + K L +R AL QG+L L QP + Sbjct: 455 LCKAADMAMYRAKEDGRNR-LRLCESGLHQRLLKDTALEEALRRALTQGELRLVYQPQFD 513 Query: 514 ----KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 G + +L G ++P +F+P+ + +L D +V E L + L T Sbjct: 514 ASDPGRVVGAEALLRWHDPASGPISPGRFIPIAERSDLILELDRRVEELLCEQLNTWSAG 573 Query: 570 K-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 S N+ + Q + R+ R+ RY ++ + + +E E A I Sbjct: 574 HAPPAPISFNVSAKSFRQGHWTKRLFRILSRYGVAAEQLQVEFAEGTLSERAGVVPEEIR 633 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +LH+ G +AIDDFGTG+ + LK+L +KID FV + + IVR+ +A+ Sbjct: 634 RLHEGGIALAIDDFGTGFTSLVNLKQLPLAELKIDQSFVAGLGQDEDAEAIVRASLAVAE 693 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A L VAE VETQ+Q L + G Q +QG L+ P D Sbjct: 694 AMGLRTVAEGVETQRQLTWLQEQGCQRIQGSLLSAPLEAED 734 >UniRef50_A0YUF3 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YUF3_9CYAN Length = 923 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 94/580 (16%), Positives = 193/580 (33%), Gaps = 47/580 (8%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGY 242 ++ ++ E R + + + + GY Sbjct: 334 QLEQRIQQRTSSLKQLDQALKISEDRWKLALQGSNDGIWDWNVQTNEIFFSPRAKEMLGY 393 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY-------NQNFLQGVETEYSLAFIL 295 K +P + L+ + Sbjct: 394 EEDNETTNHLAEWEKQIHPHDRKRVLKAIWDHLDQQTEYYSTEYRIRCKDGQYKWVLHRG 453 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------- 345 L I + ++ + + + A D LT LPN Sbjct: 454 QALWNEIGDPIRMVGSQTDLSEQKQVETQLFYYAYHDSLTCLPNRAFFMDRLHLALEQVR 513 Query: 346 --QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 E + + +D + ++ G + + + L + ++ L +L G E + Sbjct: 514 QYSEHLFAILFIDLDRFKLVNDGLGHLAGDELLIRVGHKLQQCISVHDTLARLGGDEFAI 573 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR-----FDGNQETLQPLL 455 +L + + + + + + + + + + + +L Sbjct: 574 LLDPIQGISDSIIVAERILAILQQPFILEDQTVSITASIGITFSHYYTANHSYKHSTDIL 633 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 + H + + T ++ L N +R A++ L +Y QPI Sbjct: 634 RDADIAMYHAKHHSTSK-YAIFDSKMQMDTLIRLRLENDLRAAIESSQLKVYYQPIVCLK 692 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-- 570 + + ++ ++ G+++P +F+P+ + L VL + + L Sbjct: 693 TGKIKSFEALVRLPDPKKGLISPGEFIPIAEETGLIIPLGEWVLRAACQQLRQWQIQGWI 752 Query: 571 -----KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + QK I + ++ + +SP + LE+TE + E Sbjct: 753 DVNVSVSVNVA----GQQFSQKKIVNLVQQILQETELSPANLRLEVTESAIAEHLEWVAR 808 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + QL + G +I IDDFGTGY++ +RL+R D +KID FV + + + ++ V +I + Sbjct: 809 RLSQLRQMGVQILIDDFGTGYSSLDRLQRFPIDTLKIDRSFVAKMTSQSSNSKFVEAIAN 868 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 A + SVVAE +ET +QQ L+ +G +Y QG L Sbjct: 869 FAHSLGFSVVAEGIETVEQQQLIQYIGCEYGQGNLFSPAV 908 >UniRef50_D2LTE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LTE4_BACS4 Length = 716 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 102/458 (22%), Positives = 176/458 (38%), Gaps = 20/458 (4%) Query: 291 LAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 L + +I + + ++ + + A D LT LPN R LE+ Sbjct: 250 LHASITPIIHCNEVIEVIATINDITELKNSELAVKNMAYHDALTGLPNRRILEEDLMYRL 309 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK----LYQL 396 Q+ S + +D ++++ G + I L L +N LY L Sbjct: 310 VDAKTQQKKASLIIVDLDKFKYINDTLGHNVGDRFIMMAAERLQTLTFDNHVEYFRLYHL 369 Query: 397 PGSELL-LVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 G E +++ E + + L ++ N F + + L+ Sbjct: 370 GGDEFAWIIIGPDEHVCIVTRQILTLFDEPFYYRNGEFHQKASIGVSVFPEHATNPEELM 429 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL-DQGDLLLYAQPIRN- 513 + + +VL+ + +R A+ L+ QP+ + Sbjct: 430 KAADMALLSAKHAGGN-TFRKFNSQMKNVFVSKVLMEDDLRQAIIANNQFELFYQPVMDV 488 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 ++ + ++ G++ P F+P+ + L V+ + L + Sbjct: 489 KQQKINSCEALIRWYHPKKGLINPADFIPIAEETGLIIPLGEWVIRQACRDLKRWEESQI 548 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 SVN+ L Q + R+ + + P + LEITE N S+ +++L Sbjct: 549 HLNISVNISAYQLKQSDFVERLTTIVSDERVLPNRIQLEITENGLMENTTDSINTLQKLK 608 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + GF IAIDDFG GY++ LK+ + +KID FVKDI ++ D+ IV S+ L K Sbjct: 609 QIGFTIAIDDFGIGYSSLSYLKQFPVNCLKIDRSFVKDIPSDNSDSAIVSSVVKLGKDLG 668 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VE Q+ L + YLQGY +P D Sbjct: 669 LLVVAEGVEGQEASDYLSSIECPYLQGYYYSKPIKFED 706 Score = 43.1 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 8/130 (6%), Positives = 26/130 (20%), Gaps = 6/130 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF--TLGVGKL 258 + + L ++ ++GY + G Sbjct: 31 HSMLIQLEELLRAFDHSCILVLTDSSGSIIEVNDTYCQVSGYSRDELVGNTHRLVHSGYH 90 Query: 259 RYPFLNLTWAVSTLC-LLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHR 314 F + W + + + + Y + + + L + Sbjct: 91 TQEFYHKLWQTIMNGDIWSGEIKNRKKDGSIYWVKATIYPIYNKEGKIDMFLSIRLDITE 150 Query: 315 SEWLNRRWHL 324 + + Sbjct: 151 GKIYEEKLRQ 160 >UniRef50_D1CDW9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDW9_THET1 Length = 718 Score = 586 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 118/576 (20%), Positives = 227/576 (39%), Gaps = 23/576 (3%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 L S +LI ++ R+ + A+I +A E+ T + + Sbjct: 139 RLPSNLILMLIQDVSLTESLRVQLEIEHAKIEIAERVANLGLWERDTSTGQEVWSDQTFK 198 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + P + YL+ + V ++ L + + L + Sbjct: 199 IYGLKPGSLEPSYEYLLRIVHPDDRDRVDSAYR------DSIKALSAYDVSYRILLPDSS 252 Query: 288 EYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + ++ LL V+ + QAL DPLT LPN L Q E Sbjct: 253 IRVVHSKAQIVKGADSHLLLTGTVQDVTEQKVNEESLLRQALHDPLTGLPNRVMLGQQLE 312 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + L +DN + ++ + G + ++ R L ++ + + G Sbjct: 313 KLLASNRSRSIAVLFLDLDNFKAVNDNLGHQAGDSLLVAVARRLSANLRPTDFAARFGGD 372 Query: 400 ELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +V++ ++ + + + S+ + ++++ LL Sbjct: 373 EFTVVVTKVKSIDYVVSIAKRIIESISQPFDIAGERVYTSTSIGIALCSSSEDSASSLLR 432 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 + +S + ++ + + ++ + L +RTA+ +++ QPI + Sbjct: 433 KADIALYKSKSLGRG-TYVIFDQSMEQEASEILELERNLRTAIQNDQFIVHYQPIVDAAT 491 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKG 572 + E + +L + GI++PDKF+P+ + L VL + A Sbjct: 492 GKVEMIEALLRWNSPN-GILSPDKFIPIAEEVGLINTLGELVLNKACEQTAYLKATTGAK 550 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 S+N+ L Q + + + +Y + P+ V LEITE E ++++ Sbjct: 551 FITSINVSAKQLRQPHFTNNLESMLHKYDLQPKDVQLEITENALVEEVECITNALKEIKT 610 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G RIAIDDFGTGY++ L++L D+IKID FVK + + I+ +I LA + L Sbjct: 611 LGIRIAIDDFGTGYSSLSYLRKLPIDLIKIDQSFVKMLPNDEEHRAIIYTIISLACSLDL 670 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++AE VE + Q+ +L +G +++QG LI P L Sbjct: 671 EIIAEGVEEKSQREILLSMGCKFIQGNLISHPVDLE 706 >UniRef50_B1YEJ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YEJ2_EXIS2 Length = 878 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 117/688 (17%), Positives = 232/688 (33%), Gaps = 28/688 (4%) Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 + R + L + L T V + ++ + +G Sbjct: 196 WYERRRLFQFLFAGLLLQVGADTLFVYMTTVSGDNAIRLIDPLFILGLLMIGVSGHIVSP 255 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 R + +G YL+ + +A + + Sbjct: 256 VDSKEDRQSKQRIKVQVGKLFLPYLLVILLFLTMAFYARRDEALNGL-------MIGCAV 308 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 ++ MI+S E+R +L + + L + Sbjct: 309 TILLILVRQILMILSHQELIQEIHEKADELEVSEERYKSLFTYHPDA--VYSLDLKGRIE 366 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE---TEYSLAFI 294 + VGK F + + Q ++ I Sbjct: 367 SANPSFEKLTEQHAEELVGKTYRQFTTWQQTSTDKATAQQFETIFQKSGGPDVLLNVTNI 426 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------E 347 + V + + + + A D LT N E+ + Sbjct: 427 PIRVRDRFVGMYGIGQDITTIRENELKIRRLAYYDHLTGAINRTYFEEVLHHLIETEQAD 486 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 C + +D+ + ++ +G + + + + L + ++ + + G E ++L Sbjct: 487 ETIVLCFIDLDDFKLVNDSFGHHVGDQLLIQVAKRLQEAAEPDDLVARQGGDEFTVILRN 546 Query: 408 PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA-WGRFDGNQETLQPLLGQLSWLAE 463 ++ + + L R L +++ + LL Q Sbjct: 547 VTSDDQARCRTARLLDDLKRTYAIEGIELISNPSIGAVSCRRTSEKHVVTLLKQADLAMY 606 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYD 520 Q+ ++ E ++ + + ++ L + + A++ L+L+ QP + + G + Sbjct: 607 QAK-TGGGKSIIFF-EDIAEKASYRLRLESELPIAIETNQLILHYQPQVDTVTYKMVGVE 664 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ + G++TP+ F+P+ + + R VL D + +N+ Sbjct: 665 GLIRWNHPELGMITPNDFIPMAEEAGMIIRLGEWVLREGFLQAKQWQDDGLNLKVGLNVS 724 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 +IRL + + P + LEITE A + E ++ + +L GF I+ID Sbjct: 725 MQQFHHPTFVLTLIRLIEETKVDPTRIDLEITEVSAVEDIEETVLTMNRLKDLGFTISID 784 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ RL D +KI FV+ I T ++ SI LAK+ L V+AE VE Sbjct: 785 DFGTGYSSLSRLADFPIDTLKIPREFVEKIQPATTGYSMISSIIHLAKSLHLEVIAEGVE 844 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T +Q +L++L +QGY GRP P Sbjct: 845 TLEQVNVLNRLECSRMQGYYFGRPMPAE 872 >UniRef50_A4TXR0 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXR0_9PROT Length = 823 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 114/628 (18%), Positives = 214/628 (34%), Gaps = 24/628 (3%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + + L + + D S V + + F Sbjct: 178 VIRANAHAAALFGHGPEALLGKPLPILVPDLPADAGETVGLRRDGGSFPIQVRVGALHFG 237 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + +VS + L E + +L + GY + Sbjct: 238 DESYRVVSIQDLTARKVAEAESRLHGEIFTHAQEGVLVTDTSGTILSANPAFCRMTGYEL 297 Query: 245 PVF--FIIFTLGVGKLRYPFLNLTWAV-STLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 L G+ F W V + + ++ + Sbjct: 298 DELVGSPSGFLRSGRHPDDFYGDMWEVLHRDGHWSGEICNRRRDGDVIPQWVSISAVRDA 357 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + A D LT LPN L Sbjct: 358 NGSVGNYVGVYMDISALKRHEEALRHMAHHDALTGLPNRLLLADRLDVALAKARRTGKMV 417 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G + + R LL + ++ + +L G E +LV+ + Sbjct: 418 AVAYVDLDGFKPVNDRLGHHVGDSVLIQAGRRLLDSVAADDTVARLGGDEYVLVMQDMDD 477 Query: 411 EGRLQHMVNILN---SRQIHW--NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + ++ + + + + ++ + + + + LL Q+ Sbjct: 478 DQQCRQRLSQVLTAMAEPMRFLDEDSAISITASIGAALYPNDDSDPDTLLRHADRAMYQA 537 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEI 522 L + + Q T + + ++R AL+ G +L+ QP N G + + Sbjct: 538 KQEGRNR-LAMFDPQLDLQGTLRRNTMKSVRLALEDGQFVLFYQPKVNMRLGTVVGAEAL 596 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 + L + G++ P +FLPLI +L V S L +A SVN+ Sbjct: 597 IRWLHPERGLLPPAEFLPLIEDDSLDLAIGEWVTRSSLAQMAAWKRAGAVIPVSVNVAAS 656 Query: 583 TLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 LL + AGR+ + + + P+ + LE+ E A + + +E G +A+DD Sbjct: 657 HLLSNDFAGRLEEILAEFPDVPPRMLQLEVVETAALEDIGRAREVLEACRALGVSVALDD 716 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+ L D +KID FV ++ + D IVR + LA V+AE +E Sbjct: 717 FGTGYSSLTYLRHLPIDTLKIDRSFVLNLPDDMDDLTIVRGVIVLAAGFGRDVLAEGIEK 776 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +L +LG + QGY I P P D Sbjct: 777 TEHGDMLLELGCELGQGYRIAPPMPAGD 804 >UniRef50_Q315P5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q315P5_DESDG Length = 595 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 115/567 (20%), Positives = 194/567 (34%), Gaps = 32/567 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFF 248 A KE+ L +A + + C I GY + Sbjct: 14 RSGAAQGCALAAALWEKEQLFRVLLEYSADCEIWIDACGVVRFVSPSFASITGYTPECLY 73 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTL-----CLLNYNQNFLQGVETEYSLAF---ILAVLIS 300 + L A + + E + + Sbjct: 74 RNPDYLAAIMVQSDLPAFRAQERILAERGGSFDVEVRIRTASGRECWVLCICRSITDDEG 133 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---QEAGKS------ 351 R R L + QA DPLT LPN + + + Sbjct: 134 RPQGRRLTCRDVTRRRLLAMQLQHQAGHDPLTGLPNRSLFLEKLDARVNGGRAARDGGAS 193 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G +R + L ++ N+ L +L G E L+L+G Sbjct: 194 VVMIDVDRFKQINDVLGHEAGDGVLRVVADRLRGILGGNDALCRLGGDEFCLLLAGGGRA 253 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + V + R + L + Q + ++ + + Sbjct: 254 EEVLARVQQIQQRLMDSVDTGGRRLHLTVSVGVATHRPGQNAPEDMMRNGGIALQHAKRA 313 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 L+ + + L + AL L QP+ + + + Sbjct: 314 GGG-GLEVFSDWMLESALNHARLEMELHHALKDNAFHLEFQPLVDLHSGRPVRVEALARW 372 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR---FSVNLMPL 582 G ++P F+P++ + R VLE+ A R SVNL Sbjct: 373 DHPQRGAVSPADFIPVLEETGQILRLGSWVLENACMAAARWQRRHPELRSVGVSVNLSAR 432 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L Q + ++ + R + P ++ LE+TE N E S + +L G +AIDDF Sbjct: 433 QLAQPALVDQVAAVLSRSGLEPASLKLEVTETMLMDNPELSNLVLRRLKDLGVFLAIDDF 492 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L+ D +KID FV + ++ IV+++T LA + L VVAE VE Q Sbjct: 493 GTGYSSLAYLQSFPIDTLKIDKSFVMGMTSDPGKFNIVKAVTALAHSLGLDVVAEGVEEQ 552 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q+ +LH +G +Y QG+L RP P D Sbjct: 553 EQRIMLHAVGCEYAQGFLFARPVPEKD 579 >UniRef50_C1F8P8 PAS domain S-box/GGDEF/EAL domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8P8_ACIC5 Length = 763 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 121/711 (17%), Positives = 239/711 (33%), Gaps = 36/711 (5%) Query: 50 CVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTF---------VVLCA 100 ++L + + L + T W F + + L L Sbjct: 22 AMILCAVMFGVSASLYSALVIIGITQPWLMWPLFAASCISLSVTLLHAQENRRRRDRLLR 81 Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTF-FGD 159 A+ + + L L + + Y + + F Sbjct: 82 IAVAVVTATLAGIDFFFNPPLDGGLLALLSAIYLADGLAYYRRFRRISSGVCTTLLGFAA 141 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 ++ V LL + + + L ++ V+ L ++ + +R TL Sbjct: 142 WGLVWPVASLLGHYAPHFQAPPVLWNLPKLFVAIGMILTLLEQETLRMAREAERNRTLYD 201 Query: 220 LAALSVL---LLLLCTPYENDFIAGYLVPVFFIIFTLGVGK-LRYPFLNLTWAVSTLCLL 275 + + + + + P W L Sbjct: 202 KSQCGLFLTNMSGTLLDCNDALARMSSRGSSQAMIGTSAVACYADPAERDLWIRDILRDG 261 Query: 276 NYNQN---FLQGVETEYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + ++ T + L + + + ++R+ QA D Sbjct: 262 SIENRELHLIRPDGTAWIALMNAKLRRDLRGQPMEIEGALLDVTEHRRMHRQLLWQARHD 321 Query: 330 PLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 PLT L N ++E A +Q + + C+ +D ++++ ++G + +R+ + Sbjct: 322 PLTGLANRASMEDAVQQALAGADANGSQVAMICMDLDQFKWINDNHGHTIGDGFLRAFAQ 381 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYG 438 L + + L ++ G E LL+L +E + + + + L Sbjct: 382 RLKTAVTAPDLLGRVGGDEFLLLLRNVSSEQDAAERLERVLKTLDKPLEVEGHTLRPSVS 441 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 A + + L ++ + + L + Sbjct: 442 AGVAIYPCDSAHAADLRRHADHALYRAKEMGRDQ-YQFYSRN-RKKIDDDIALERLLHRG 499 Query: 499 LDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 L + +L+ QP + G + +L + G++ P FL + + L V+ Sbjct: 500 LKENWFVLHYQPQMFADGGFFGVEALLRFQHPERGLLQPADFLSIAERNGLLHPLGEWVI 559 Query: 557 ESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 E + +VN+ + + + + R+ R + P+ + LEITE Sbjct: 560 EEACRQHREWQSQGLPMLTMTVNVSAVQFNRPDFCESVERILLRQQMPPEYLELEITESL 619 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 ++ E S+ +++L + G RIA+DDFGTGY++ L RL D++KID F++ + Sbjct: 620 VMNDCEDSVAQMKRLKELGIRIAVDDFGTGYSSLSYLHRLPIDVLKIDRSFIEKLQEPHG 679 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 IV +I LA + L VVAE +E Q+ LL LG LQGYL + P Sbjct: 680 TLPIVEAIISLANSLHLQVVAEGIEHDFQRQLLRHLGAHRLQGYLYSQAIP 730 >UniRef50_UPI0001698B39 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B39 Length = 622 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 102/500 (20%), Positives = 197/500 (39%), Gaps = 17/500 (3%) Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + II G+ L A + + + + + + + Sbjct: 116 SMLLIITVAGMIVSGLLLARLMSADVQRMIKAMVELAKGNTGVQVPASVMASRELKAMGQ 175 Query: 305 LLYMVRI-YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 L + R + R+ A D LT LPN + G + L Sbjct: 176 ALIVFRDSLIKLADSQERYQQLAQHDTLTGLPNRLLFHDRLNHALNRANRSKIGLALLFL 235 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ +G M + + + LL ++E + + +L G E +++L G + Sbjct: 236 DLDRFKQINDAFGHPMGDRLLALVAKDLLEALREEDTIARLGGDEFVVILEGVHGRDHVI 295 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ L + R+ ++ + +G + + E + L+ Q+ A Sbjct: 296 NVAEKLLAVIGRERSLDSLQMHIGVSIGISLYPEDGEDVTTLVRNADAAMYQAKAKGRN- 354 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 M++ L +R A++Q LL QP + + G + +L + Sbjct: 355 GYAFYTPMLTEVLEASFELERAMRQAVEQEQFLLLYQPQVDVESGDIVGVEVLLRWQHPE 414 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G+M P++F+ L + L ++ L+ + D R S+N+ L Sbjct: 415 LGLMLPEQFISLAEESGLILPLGRWLVRQALQQASQWQLDGLRPVRLSINISNHQLADVQ 474 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 A + L ++ + P + LE+TE N E + ++E + G +IAIDDFGTGY++ Sbjct: 475 FASELGELLGQFGLDPGLIELEVTENSCAENLEILIEHLESIKALGVQIAIDDFGTGYSS 534 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK+ D +K+D F+ D++ + + IVR++ L ++ L V++E VE + A L Sbjct: 535 LSYLKQFPVDTLKVDRTFIHDLIGSMENQAIVRAMIVLGRSLGLQVISEGVEQSAELAWL 594 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 G QG+L +P Sbjct: 595 RAEGCDTYQGFLHSQPMSAE 614 >UniRef50_B9R6G6 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R6G6_9RHOB Length = 1020 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 110/615 (17%), Positives = 208/615 (33%), Gaps = 28/615 (4%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + + I F L + L Y + + I A Sbjct: 387 RAMTEAAFTALLVGDGIDGFENRYVCACGAAKYLRWSARSDVDRQLIYAVAQNITEQKKA 446 Query: 197 QILWRRDIAPSLGKEKRAF--TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 + + ++ ++ T YE D I G Sbjct: 447 ENALKLAANVFTHSDEGIIITDINGAIVDINEAFTDITGYERDEILG-----NNPSILSS 501 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRI 311 + + + + + ++ ++ + + + + Sbjct: 502 GKHDADFYQTMWSKLRKDGVWQGEIWNKRKDGDVFAERLTISAIEDESGNTTNYIGLFVD 561 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFM 363 + + R+ A D LT LPN L A + + +D + + Sbjct: 562 ITKMKAHERQLEHLARYDRLTGLPNRVLLADNMQQAMARARRHGHTLAIAFIDLDGFKAV 621 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + YG + S+ L +++ + L ++ G E + +++ E +N + Sbjct: 622 NDTYGHAAGDELLVSVAHRLTKVLRTEDTLARIGGDEFVAIITDLPDEKSCVSTLNRILD 681 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S++ + + +E L Q ++ + Sbjct: 682 AASKEFKLGAATASVSASIGVTFYPQTEEIDGDQLERQADQAMYEAKISGRNQ-YKFFDP 740 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + T+ + + AL L+ QP KE GY+ ++ + G++ P Sbjct: 741 EQDRRLTEYYAQVADAKKALKTDAFRLHYQPKIRLATKEVIGYEALIRWQHPEKGLLMPG 800 Query: 537 KFLPLIAQF-NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 FLP I + +++ VL++ L+ + SVN+ L L + + + Sbjct: 801 AFLPPIERHPDVAIELGNWVLDNALEQIERWNEVGLDTTVSVNVSALQLTSSDFEETLNK 860 Query: 596 LFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +++ P + +EI E A S+ E I R A+DDFGTGY++ LK+ Sbjct: 861 HLQKHPAAEPCQLEIEILETDALSDIERVSKIIRNCRLSSVRFALDDFGTGYSSLAYLKQ 920 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +KID FV D + N D +++ I L + ++ V+AE VET LLH G + Sbjct: 921 LPIDTLKIDQGFVHDSLNNAQDQELLKLIISLGRVYNIDVLAEGVETPAHAELLHTYGCR 980 Query: 715 YLQGYLIGRPQPLAD 729 Y QGY RP P D Sbjct: 981 YAQGYAFARPMPADD 995 >UniRef50_B1HMM5 Sensory box/GGDEF family protein n=2 Tax=Bacillaceae RepID=B1HMM5_LYSSC Length = 573 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 93/497 (18%), Positives = 177/497 (35%), Gaps = 45/497 (9%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWL 318 F + + + N + Y + + + + + + + Sbjct: 78 FREMWRTIGNGDMWNGEVCNRAKDGSLYWVKTTIFPFLDERGKPYQYIAIRVDITAQKDI 137 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 ++ A D LT LPN R LEQ + + ++ + ++ G + Sbjct: 138 -KKITHIAYHDELTGLPNRRKLEQRLENEFHQSRRSGEKFALFFIDVNRFKHINDGLGHI 196 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 + + + L + + Y+ E +++L+ R++ M + + Sbjct: 197 IGDMFLVEMSNRLRNIDYTSNSFYRHNSDEFVMILNDVN---RIEEMAKEIIGVFNESFV 253 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 +N F + T++ LL + + + + K Sbjct: 254 VDNYEFYASISIGISIFPDHANTVEELLKNADIAMYAAKST-RGNQYRLYRDNMDEANDK 312 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 +LL + AL L L+ QP + + G + +L + G + PD+F+P + Sbjct: 313 WLLLETKLHQALKNDLLELHYQPKIDLKTDTIIGMEALLRWYDPELGHIPPDRFIPFAEE 372 Query: 545 FNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L + VL R +VN+ P+ + + + I Sbjct: 373 CGLINDIGVWVLGKASAQAKLWNESHNLRLRVAVNISPIHISTSGFVEMVKDVIAETGID 432 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 PQ + +EITE E + I QL G I++DDFGTGY++ LK+ D++KID Sbjct: 433 PQLLEIEITEMSMLDYTEDLINTINQLRALGITISLDDFGTGYSSLNYLKKFPVDVLKID 492 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ-----------QALLHKLG 712 FV+DIV ++ ++ LA A +L Q +L + G Sbjct: 493 RAFVRDIVPEKSGIAMISAMISLAHALNL-----------QVVAEGVEEEAELNVLREHG 541 Query: 713 VQYLQGYLIGRPQPLAD 729 +Y+QGY +P + D Sbjct: 542 CEYVQGYYFSKPLSVED 558 >UniRef50_B1Y3L9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3L9_LEPCP Length = 704 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 104/596 (17%), Positives = 201/596 (33%), Gaps = 37/596 (6%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL--- 226 L+L + + + L+R + E R A V Sbjct: 94 LALALGAADFITKPFSPPVVHARVANVLRLYRDNAENLQRNEARWIFAVEGAEQGVWDWD 153 Query: 227 --LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNYN 278 + + + G ++ Sbjct: 154 LREHSVTLSQQWRILLGDDEGAGDTSVDAWRARVHPDDAAAVQRRLDRHRRGISSGYESE 213 Query: 279 QNFLQGVETEYSLAFILAVL----ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 G + + V+ + ++ + R + + A DP+T L Sbjct: 214 HRMRCGDGSYVWVLEGGRVVQHDEAGRPMRMIGTLSDISRRKEAEAQAFSLAFYDPVTEL 273 Query: 335 PNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN R L + + + C + +D+ + ++ +G + +R + L Sbjct: 274 PNRRRLVELLRFSLVGDQLGQGSATLCLVDLDHFKLVNDAHGHDVGDQLLRQVAVRLKAC 333 Query: 387 MQENEKLYQLPGSELLLVLSGPE--------TEGRLQHMVNILNSRQIHWNNTGLDMGYG 438 +++ + + +L G E ++L + + + + Sbjct: 334 VRQQDIVARLGGDEFAVLLMHERRSAVSPAAAAEAAGAKLLAVLAEPYAIGDHLHHCSAS 393 Query: 439 AAWGRFDGN-QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 D + E + LL ++ L + + + L +RT Sbjct: 394 MGVVAVDADKAEQAEQLLKWADIALYEAKRAGRG-CLRFFDPAMQAAVEARSALEAELRT 452 Query: 498 ALDQGDLLLYAQPIRNKEG--EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 AL L Q G + ++ G++ P +F+ L + L + Sbjct: 453 ALACRQFQLVYQLQVGDRSAALGAEALVRWHHPQRGVIGPTEFIALAEETGLIVPLGRVL 512 Query: 556 LESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 LE + + L D ++N+ L + + ++ R + + LE+TE Sbjct: 513 LEQVCEQLCAWERDADLDDLTVALNISARELHEPDFVDFVLATLARTGAPVRRLKLELTE 572 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + + + +L G ++DDFGTG+++ LKRL D +KID FV+DI+ + Sbjct: 573 SALVGDVDDIAARMHRLRDHGVGFSLDDFGTGFSSLSYLKRLPFDQLKIDRSFVRDILED 632 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+DA + R+I LA + LSVVAE VE Q +L + G + QG+L G P P A+ Sbjct: 633 TVDARLSRAIVALAASLGLSVVAEGVELAAQGDMLREFGCRQFQGFLYGVPMPAAE 688 >UniRef50_A3YI96 Sensory box/GGDEF family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YI96_9GAMM Length = 806 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 101/559 (18%), Positives = 210/559 (37%), Gaps = 34/559 (6%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---CTPYENDFIAGYLVPVFFIIFTLGVG 256 + + + + A ++ L + T + + + + Sbjct: 232 LESTLKALERSDAHSKAIISQAGDAIFLSDMEGQITLVNKAAVKMVGIDEQELTHSNLRS 291 Query: 257 KLRYP----FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF-ILAVLISFSVCLLYMVRI 311 F L + + ++ ++ S+ +L + R Sbjct: 292 LHAEETWVSFYQDLVKQPLDTPLTIETLYRHSSGAVTPIEIRLIKYVLQESIEVLILARD 351 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFM 363 + + + A D LT LPN + + E ++ + L +D + + Sbjct: 352 ISARKEAEDKINHLAYFDSLTHLPNRHWIMERLESSMEISRERKVKGAVLFLDLDRFKNI 411 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEK-LYQLPGSELLLVLSGPETE-----GRLQHM 417 + G + ++ + ++ E + + +L G E + + E + ++ Sbjct: 412 NDSLGHDVGDLLLQVVANDFK-VLAEGDICVARLGGDEFVFLFPFLEGDLDYINEKVAFF 470 Query: 418 VNILNSRQIH----WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + + + FDG +E + LL Q ++ Sbjct: 471 AQQIV-QSFNKSKFVGSHEMHISVSIGITLFDGFEENVGVLLKQADTALYKAKDAGRN-T 528 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKEGEGYDEILARLKYDGG 531 + + T ++ L + A+ + LY QP E G + ++ D G Sbjct: 529 YRFYKAEMQVLTDDRLKLEKALHRAITHNEFELYYQPQNNVKGELLGAEALIRWHDGDNG 588 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQKN 588 + P +F+PL + L V+E+ L+ S+N+ P+ Sbjct: 589 FIPPAQFIPLAEEIGLIIELGEWVMENAFYQLSQWLKRDLWKPDWTLSINVSPIQFQHPE 648 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + RL +Y+I + +EITE ++ ++S +E + G +++IDDFGTGY++ Sbjct: 649 FLINLERLLLKYNIPATLIDIEITENMLLTDLQASRLKMEHIRSLGMKLSIDDFGTGYSS 708 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 + LK L + +KID FV+D++ ++ D IV ++ ++ A + V+AE VETQ+ L Sbjct: 709 LQYLKTLPIERLKIDQSFVRDLLIDSGDEAIVGAVIAMSGALDIEVLAEGVETQEHLLRL 768 Query: 709 HKLGVQYLQGYLIGRPQPL 727 ++G QGYL GRP Sbjct: 769 EEMGCLNYQGYLFGRPVSA 787 >UniRef50_C5T6Q1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6Q1_ACIDE Length = 760 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 126/732 (17%), Positives = 244/732 (33%), Gaps = 36/732 (4%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFH 80 VL +P + +F + + +++ + G V+ G+ N Sbjct: 10 AAVLRPRRGARTP--WLDHHALFSRFRIGTRLAAMMVLAGLVAVLLAASGIRGLADANES 67 Query: 81 LSFLQTAVMLGSQTFVVLCACAIL-RWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC- 138 L + M +T + + + QL T L Sbjct: 68 LHMVYEGRMKPVRTLGQISHLMLANQHQLQIALGQTATGAGPSAITLDPQLALKASEAIE 127 Query: 139 --SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + + ++ + A + + + A Sbjct: 128 RNVHTIDRLWDEYASGPLSAQERTLAARFATRRNQYLEQAVSPVLDALRTLNYQDTRRLA 187 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 S + +A + + L+ ++ LGV Sbjct: 188 TGARTLYERASPDIQALVDLQFEMAHAAYAAGVQRYNKTRWMAVNALLASMAVLTVLGVM 247 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE 316 + + AV + + + S L+ + + + Sbjct: 248 LI-RSIVQPLQAVKQVFQHISDGKLDSA--------IEVRGHDEISQLLIALREMQAKLG 298 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + H A DPLT LPN R L++ + ++ L +DN + ++ G Sbjct: 299 ANEKAIHHLAYYDPLTNLPNRRLLKECIQAALAASNRDDHHRALLLLDLDNFKTINDTLG 358 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH-----MVNILNS 423 + + + L +Q + ++ G E ++++ + + + L + Sbjct: 359 HELGDAFLMDTAQRLRHAVQAPHFVARIGGDEFVVLVDRLPADEAAALEQVNLLADQLLA 418 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 F + T++ LL + Q+ + Sbjct: 419 AVAGPCLLAGQWHHGSASIGICLFRHHNATIKDLLKRADAAMYQAKNAGRN-NHCLFDPA 477 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKF 538 + Q + L +RTA+ +G + L+ Q N + G + +L G + P +F Sbjct: 478 MQAQLETRTALEAALRTAVARGQMELHFQVQVNGAMQATGAEVLLRWNHPTHGPVPPAQF 537 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 +P+ L VL+ L + +VN+ + ++ Sbjct: 538 IPIAEASGLIHSIGAWVLQRACAQLKAWDGQAHTRHLELAVNVSAQQFRHPDFVAQVCDA 597 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 R +P ++LE+TE + ++ + L + G R A+DDFGTGY++ LK+L Sbjct: 598 LDRAGANPGLLVLELTESLVLHDIADTVQKMLALRRHGVRFALDDFGTGYSSLSHLKQLP 657 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +K+DG FV+DIVT+ DA+IV++I +A+ L V+AE VE + Q+ +L L Sbjct: 658 LHHLKVDGCFVRDIVTDPSDAVIVQTIIGMARNLGLCVIAEGVEAEAQRQVLLDLQCPVY 717 Query: 717 QGYLIGRPQPLA 728 QGYL RP PLA Sbjct: 718 QGYLFSRPLPLA 729 >UniRef50_B9MQD5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQD5_ANATD Length = 1016 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 98/572 (17%), Positives = 206/572 (36%), Gaps = 35/572 (6%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC---------TPYENDFIAGY 242 + + + ++++ L + + + + D Sbjct: 434 ELMNTLDILNKQSEMLMEEKEKYKFLVENVSDCIWEIDFNEKKIEFYGKLKDQFDIDVIK 493 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL--NYNQNFLQGVETEYSLAFILAVL-- 298 F R L + ++ + +L Sbjct: 494 SKNDFSAWLEFFHEDDRATVFKKLQDAILLHEEKVEFESRIRDKHGNWRWISSHVQILYN 553 Query: 299 -ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAG 349 ++ + + + R A D LT LPN + E E ++ Sbjct: 554 EEDKPEKIIAVNIDWTAKKEYEHRIEYIAYYDALTNLPNRKLFEDRLESLIKKAEDEKTQ 613 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE---NEKLYQLPGSELLLVLS 406 + + IDN + ++ YG + ++ + +L + N ++ G E ++L Sbjct: 614 GAVVLIDIDNFKDINDLYGHEAGDEYLIAVTKKILEYLNSIKLNTFFARVGGDEFAVILD 673 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTG--LDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 G + + + L +I+ + + + +++ + + Sbjct: 674 GLAKKEEVIEVCTKLLGIFESEIYIQKIEGCIFTSASIGVSFYPDDGRSVKEIFRNVDMA 733 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 + + + + K++ + +++ A++ LY QP+ + E Sbjct: 734 LSSAKENGKND-FQIFMPFMLMKNFKKIEIEKSLKKAIEADQFELYYQPVINLKDMEIHS 792 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSV 577 + +L + + GI++P +F+P+ L + V+E L ++ Sbjct: 793 VEALLRWVSPEKGIISPLEFIPVAEDSGLIVKIGEMVIEKAFSDLKNWEKKGISYLHMAI 852 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L K I + +RY ++PQ + EITE A N + S+ + L + G + Sbjct: 853 NISARQLKTKFFEKMIQKQIERYGVNPQKISFEITETGAVENFDVSLKILSFLCQLGIKF 912 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 IDDFGTGY++ L+RL +KID F+ +I + IV I +A L V+AE Sbjct: 913 LIDDFGTGYSSLIYLRRLPIGGVKIDRSFISEIELSKESRAIVEGIILMAHKLDLKVIAE 972 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET+++ +L ++G + QGYL +P P + Sbjct: 973 GVETKRELEILKEIGCDFAQGYLFSKPVPKTE 1004 Score = 45.0 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 10/167 (5%), Positives = 45/167 (26%), Gaps = 9/167 (5%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL-SW 219 + + L+ + A + + + R + A + + +A + L Sbjct: 261 ILLSALYLLIIILFAASVIIFVMTRINRGLERGKQAYEKYAQLLAENANAIVLTLNLKGE 320 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 + + + + + V +F + F ++ L ++ Sbjct: 321 IIYFNKFAEQITGYKSEEVVGKKWVDIFIPSHR--REYIENLFKRIS---EVKILNDHEN 375 Query: 280 NFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWH 323 + + + ++ + + ++ + + + Sbjct: 376 EIVTKNGDTRWILWNNTLIENPYLNEPLIISTGLDITQIKRTQQLLE 422 >UniRef50_A3ITH6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Response Regulator Receiver modulation n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ITH6_9CHRO Length = 635 Score = 585 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 84/432 (19%), Positives = 172/432 (39%), Gaps = 26/432 (6%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---------FCCLRIDNLEFMSRHYGL 369 + A D LT L N +QE + + +D + ++ G Sbjct: 187 EAQLKHDAFHDKLTGLINRELFVNLLKQEMKTASVNSDYLYGVLFIDLDGFKMVNDSLGH 246 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQI 426 ++ ++ + + L ++ ++ + + G E ++L + + + + S+ Sbjct: 247 LIGDDLLKVVSQRLKTCVRSSDAVARFGGDEFAILLKNLKELSLAEVIAQRILKTLSQPF 306 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + NN + +G +L Q+ + Sbjct: 307 YLNNNEVAIGASIGMTFNIFKYNQATEILRDADIAMYQAKRQGKGH-YQCFNPDMQALVF 365 Query: 487 KQVLLLNTIRTALDQ-------GDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 ++ L ++ A++ LY QPI + + G++ +L G ++P Sbjct: 366 ARLQLERELKKAVENIKNNEFSQQFSLYYQPIVHLKTRKINGFEALLRWQHPTEGWISPQ 425 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRI 593 KF+P+ + L +L+ + + ++ R ++N+ + Q N +I Sbjct: 426 KFIPIAEETQLINPLGWWILKQVCQQMSYWTKQFPNHDSLRVNINVSAIQFKQDNFVEQI 485 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + H+ P+++ LEITE + S+ +++L G + IDDFG GY+ RL+ Sbjct: 486 GLIIQESHLPPESLKLEITESYTLNTENYSLEKLQKLKDMGIHLCIDDFGVGYSCLNRLQ 545 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L + +KID F++ + + V++I LA + + VVAE +ET+ Q L +LG Sbjct: 546 ELPVNTLKIDRSFLQKLNQCNPNLQFVKAILMLASSLEIEVVAEGIETKTQLQYLQELGC 605 Query: 714 QYLQGYLIGRPQ 725 QGYL +P Sbjct: 606 LLGQGYLFSKPI 617 >UniRef50_C8QI11 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pantoea sp. At-9b RepID=C8QI11_9ENTR Length = 732 Score = 585 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 94/428 (21%), Positives = 165/428 (38%), Gaps = 20/428 (4%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + A D LT LPN +E + + + +D + ++ YG Sbjct: 305 ASEAQAQHLAFHDVLTGLPNRSMVEDRLSQALAMAARYDHRVALLLIDLDRFKTINDTYG 364 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 I + L +++ ++ + ++ G E ++V+ + G++Q + + S Sbjct: 365 HHAGDELIIQVGHRLTSIVRASDTVGRIGGDEFIIVMPDVDNIGQVQSLAKRIISALSEP 424 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + +G + Q L+ + ++ E ++ Sbjct: 425 YQLFGSEAWIGASIGLALAPKDGLDRQELMRKADIALYEAKNSGRGQ-FRQFERVMDESL 483 Query: 486 TKQVLLLNTIRTALDQ-GDLLLYAQPI--RNK-EGEGYDEILARLKYDGGIMTPDKFLPL 541 + + +R AL L ++ QP+ + +G + +L + G + P +F+ + Sbjct: 484 RTRQQIAADLRQALLHFDGLAVWYQPLMEISGQRVDGVEALLRWQHPERGEVPPGEFIAI 543 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL K P +VN+ P+ R+I + + Sbjct: 544 AEETGLIIPLGEWVLREACKTSLRLPQ----LIVAVNVSPVQFRASGFVERMIEIVQSEG 599 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 PQ + LEITE + + NI L GFRIA+DDFGTGY++ L D IK Sbjct: 600 ADPQRLELEITEGVLIEDEHEARNNIIALRSAGFRIALDDFGTGYSSLNYLSTFPVDKIK 659 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F + + A I+ S+ L A L V AE VET+ Q + L G LQGYL Sbjct: 660 IDRSFTQSLGVAQNSAAIIESVVRLGHAMGLMVTAEGVETEGQMSALADAGCNQLQGYLF 719 Query: 722 GRPQPLAD 729 + P + Sbjct: 720 SQAVPFEE 727 >UniRef50_B9ZM87 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM87_9GAMM Length = 685 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 90/459 (19%), Positives = 171/459 (37%), Gaps = 46/459 (10%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMS 364 R A DPLT LPN R E + + +D + ++ Sbjct: 213 ERNRHAERLIHHASHDPLTGLPNRRLFHDRLEHAIARYAREPESLFAVLFVDLDRFKLVN 272 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQ---------------ENEKLYQLPGSELLLVLSGPE 409 G + + + LL ++ ++ L +L G E ++L G Sbjct: 273 DSLGHTAGDELLAQVGKRLLTALRQNDTVSRPGGNQNTRPDDTLARLGGDEFTILLEGLH 332 Query: 410 TEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFD-----------GNQET-LQPL 454 + + + + + + T + L Sbjct: 333 EPVDALRVAERLQAILHQPFSIAGQTVYVTVSIGIATRPYGQACPVVSPDQDGPTCAEDL 392 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-- 512 + + ++ + + + + Q + + L ++R ++++ +++ QPI Sbjct: 393 MREADMAMYRAKSLGKARC-EFCDPGMQSQALESLRLETSLRESVERNAFVVHYQPIMSL 451 Query: 513 -NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCD 569 + G++ ++ + +G ++ PD+F+P+ L D+QVL + L Sbjct: 452 ADNRITGFEALVRWER-EGELLPPDRFIPIAEDAGLVHLIDMQVLYTACSQLQAWNAQRS 510 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 S NL L + + + + P+ + LEITE N + + ++ Sbjct: 511 GPPLTISTNLSARQLTRPELVDEVATILCGTDTPPEQLRLEITETATLGNLDELIATLKG 570 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G +A+DDFGTGY++ L RL DI+KID FV + + +V+++ ++A+ Sbjct: 571 LKALGVSLAMDDFGTGYSSLSYLHRLPLDILKIDRAFVAGLDRDEYSQRLVQTVINMARN 630 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VAE VE+ A L LG QGY RP P Sbjct: 631 LGLEAVAEGVESNTHAATLRALGCTRAQGYYYSRPVPAD 669 >UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2C5_DESAC Length = 777 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 125/751 (16%), Positives = 255/751 (33%), Gaps = 43/751 (5%) Query: 4 EHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRG 63 +I NI+ L F A+I ++ F A + + + G Sbjct: 24 RAEVIINIRWLLLIFAAV-----------GSALIIAAIPFGADLNATHVAVLCL--GLIV 70 Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLG-SQTFVVLCACAILRWQLGTRWRYGLTSRYVW 122 + CG+ + N H ++ + + L + + + Sbjct: 71 LTLYNCGLHLLSRTNRHPLWIDRGQLTADTVLVSTLIFFSGAEHSWLWPLYVVIALEATF 130 Query: 123 ----QRLFWLGLVTPIGIKCSMYLVGSFFDFP---LKISTFFGDADAI-FTVVDLLSLFT 174 R + + ++ GS+ + P L + G I ++ L + F Sbjct: 131 LLRHPREVVVISSLGAALFAAILCAGSYGNVPQFNLHLLDNIGPQHTIDRVLLWLWACFL 190 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 + + + + +Q R+ E + A + L Sbjct: 191 GCSATLIGSSFNSALTNE---SQETLSRENQLQRFMESAQDLIFAFDAD-NRIHYLNGAA 246 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 P + L +L + E + Sbjct: 247 RQRLDVDISGPALHVDQILDESELPRWNSKTCLLTVGTPFEPTSFRLRSAAGHELPVDCR 306 Query: 295 LA-VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------AP--E 345 ++ ++ + R +R + + D LT L N + + Sbjct: 307 ISTAADGGTILHWVVCRDLSTQLENEKRLYNLSNFDQLTGLTNRQEFSEQATNAMRLTKR 366 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + + ID+L+ ++ + +R L ++E + + +L G++ + Sbjct: 367 LQQQMAVALISIDHLKVINETLTSEVGDSLLREFSVRLSQGVRETDLVGRLSGNQFAVAF 426 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + ++ ++ L S+ + + + + A + G+ +++ LL + + Sbjct: 427 TNIDDIQSIEQVMTKLRKKLSQPMTIGDQEMFVTSSAGLSIYPGDALSVEALLKKANSAR 486 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 AH + ++ ++N + AL + +L L QP N E Sbjct: 487 YYVRAHGGNK-HQFYAPEMDEDIKNRLEMINGLHNALVRDELQLSYQPKVNLAEGEFHSV 545 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + +L G ++P F+P+ + + L VL + R +VN Sbjct: 546 EVLLRWSHPTLGQVSPSDFIPMAEESGMIGELTLWVLRQACLQVHAWQKQGLPPIRVAVN 605 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L + + L + PQ + +EITE + +++ + +L K G +A Sbjct: 606 VSGHQLQSSDFITALTDLLNETGLDPQWLEIEITESVLMQSPTAAIATLNKLRKLGIHLA 665 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR +KID F+KDI + A I SI ++ K+ L+V+AE Sbjct: 666 IDDFGTGYSSLAYLKRFPVHSLKIDRSFIKDIEQSERYATITSSIIEMGKSLHLTVIAEG 725 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q A L + +QG+L P + Sbjct: 726 VETLGQMAFLKEQNCDEIQGFLYSMPVNADE 756 >UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L914_MAGSM Length = 1264 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 101/564 (17%), Positives = 202/564 (35%), Gaps = 25/564 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-CTPYENDFIAGYL---V 244 M+V RR + + + + ++GY V Sbjct: 671 MVVVIVEDVTQRRRSEEALRLAATVYESTNESVVIFNGEGRVEQVNQAFCRLSGYTAREV 730 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SF 301 + L + F + A++ + + S L+++ Sbjct: 731 RGLELRHLLSARYEKSQFDEMAQALALTGHWSGEVMGQRKQGALASERLSLSLVRRPDGS 790 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + + + QA DPLT LPN R + + Sbjct: 791 TQNTIAVFTDLTEQKAQEELIWRQANFDPLTSLPNRRLFQDRLHQALAQADRSAGRVALF 850 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G ++ + ++ ++ + +L G E ++L + Sbjct: 851 FLDLDRFKPINDTMGHQAGDELLQKCAERINAAVRSSDTVARLGGDEFTVILPNIQNGQD 910 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 L + + + + ++ + + + + L+ Q+ H Sbjct: 911 LSRIAEGIIKTLTEPFYLKAGEANISTSVGVAVYPDDSQDDEGLMRAADAALYQAKDHGR 970 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + E ++ Q +++ L +R L G+L L QP + G + ++ Sbjct: 971 N-NVQFFTESLNQQILERIALEKGLRRGLGAGELFLVYQPQVEVSSGRLSGAEALVRWRL 1029 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLL- 585 G ++ PD+F+P+ + L + V+ ++ + PR S+N P Sbjct: 1030 PTGEVVMPDRFIPMAEESGLIVQVGEVVVSLAVQQIRAWLDAGFEPPRISINASPKQFHL 1089 Query: 586 -QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + ++ Y ISP + +EI E +N E S + L K G + +DDFGT Sbjct: 1090 DGGGLTSILMSTCDAYQISPSRLAVEIVESGLMANPERSGEILAGLAKLGVEVELDDFGT 1149 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ RL RLQ +K+D F+ I + + ++V ++ +A+ + V+AE VE +Q Sbjct: 1150 GYSSLARLSRLQIQALKLDRRFLVGIPEDPQNRILVTAMVQMARGMGIEVIAEGVEDLRQ 1209 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L LG QG+ I RP Sbjct: 1210 MGFLQDLGCHRAQGFGIARPMEPE 1233 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 33/405 (8%), Positives = 90/405 (22%), Gaps = 89/405 (21%) Query: 4 EHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR- 62 ++ + + + L +V+ + +P ++ I + +PL + +++ FGW Sbjct: 162 GSTVVHAVGGW-FSLALLLVIGPRTGRFNPDGSVNP--ITASNLPLTTLGALILWFGWIG 218 Query: 63 ---------------GVVPVLCGMFCTNLWNFHLSF-----LQTAVMLGSQTFVVLCACA 102 V+ G ++ S+ + ++ A Sbjct: 219 FNGGSTLSLDARIGPVVLATCLGAVGGSMGALLWSWWREGRPSVLSAINGTLAGLVAVTA 278 Query: 103 ILRWQ-----LGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF 157 LG + + + G+ +G G + + + Sbjct: 279 GAHALSPLAALGAGLLAAPVALLMENWMLRHGIDDAVGAVPVHLGAGVWGTLAVALLGDL 338 Query: 158 -----GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE- 211 G + L + A L+ ++ + + R+I ++ ++ E Sbjct: 339 HKLGTGLSRLEQLWAQLQGVLAAALVAFVIPWLVLRVINRRFPMRVTPEQEWQGLNISEH 398 Query: 212 ----------------------------------------------------KRAFTLSW 219 + + Sbjct: 399 GTQTELSSFLGVLRAQAEGGDLSLRAEVDPFSEVGLIADRYNHVMDAMEAAVAKTRAVFQ 458 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 A ++L++ + VF + L+ Sbjct: 459 TAGDAILIIDPHSGQITAHNPM-AEAVFGRSSAAFAHLTLSDLVVGVTPQRFWLGLHEEG 517 Query: 280 NFLQGVETEYSLAFIL-AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + L + L+ R + Sbjct: 518 EGRLPDGHTFPLELAITRASHGDGEMLIGTFRDIRARKQAELAIK 562 Score = 43.4 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 19/212 (8%), Positives = 48/212 (22%), Gaps = 13/212 (6%) Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 + + + + G + + F L + Sbjct: 483 AVFGRSSAAFAHLTLSDLVVGVTPQRFWLGLHEEGEGRLPDGHTFPLELAITRASHGDGE 542 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLV- 244 M++ ++ E R TL AAL + L+ + + Sbjct: 543 MLIGTFRDIRARKQAELAIKASEARFRTLFASAALGMALIDAKQRVVDANPALMQMLELS 602 Query: 245 ---PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ---GVETEYSLAFILAVL 298 + L + + AV N +++ + Sbjct: 603 HHRDALPPLAQLAHPQDQQEVAARLDAVIEGRSPQENCEVRCLCEARHLTIWTRMVISPI 662 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + + + ++ +V + L A Sbjct: 663 VLESNLTPMVVVIVEDVTQRRRSEEALRLAAT 694 >UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q0HLF7_SHESM Length = 684 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 89/428 (20%), Positives = 177/428 (41%), Gaps = 20/428 (4%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 + A DPLT LPN L + ++ + + +D + ++ G Sbjct: 240 QTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFALMFIDLDRFKNINDSLG 299 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + + I R L ++ + + +L G E +++ + + V+ L + Sbjct: 300 HALGDQFLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPDQAADFVDKLLVQLNVP 359 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 I N + + + + + L+ + A ++ ++ + Sbjct: 360 IQLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQ-WAFFKQQMTERA 418 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ ++ AL + LLY QP + + G + ++ K +++P F+P+ Sbjct: 419 AVRLRTEASLHDALKNNEFLLYFQPKLDLQTGKITGCEALIRWQKDGR-LISPISFIPVA 477 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + + V+E + L ++N+ ++ I ++ RY Sbjct: 478 EETGIIIPIGRWVIEQSCRVLREWQKKYNFAIPIAINVASQQFADASLVSDIKQMALRYQ 537 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I P+ + +EITE ++ E ++ +EQL GF IA+DDFGTGY++ L+ L +K Sbjct: 538 IQPELLEIEITETSLMNDIELAINKLEQLKSAGFGIAVDDFGTGYSSLSYLRHLPITTMK 597 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV D+ ++ I +I L K +L++VAE +E +QQ L + Q QG+ Sbjct: 598 IDRCFVSDLPEDS---AIASTILMLGKQLNLTIVAEGIENEQQLDWLKRNQCQIGQGFYF 654 Query: 722 GRPQPLAD 729 +P P A+ Sbjct: 655 SQPLPQAE 662 >UniRef50_Q2SLT6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLT6_HAHCH Length = 928 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 115/598 (19%), Positives = 229/598 (38%), Gaps = 28/598 (4%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR-MIVSPHFAQILWRRDIAPSLGKE 211 I T + + S + +I M +IV + + Sbjct: 312 IRTNIDETSWHLLLSVKQSTIRSAIIEQMTPEMALAGLIVLFAALIQRYFLTAGQLESSQ 371 Query: 212 KRAFTLSWL-AALSVLL------LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN 264 +R + A+ ++L ++ P DF + I + L Sbjct: 372 RRYRQMFEHCDAVQIILDPTNNKVIDANPAACDFFGFSSEMMGNISASRLFLSENNEMLG 431 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWH 323 W S L +G + ++ + + L +V + + Sbjct: 432 ENWLPS-LQSGKTVIAARRGDNRSSLVEMYVSDIKDKASSYLYLIVHDITDRKRSEEQIR 490 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 LQA DPLT LPN L + ++A + + +D + ++ + G + Sbjct: 491 LQAYYDPLTRLPNRSYLFEHLNSLIASHKREQARLAVLFIDLDRFKQVNDNLGHGVGDKL 550 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTG 432 ++ + L ++E++ L +L G E +VL E H+ +L + + Sbjct: 551 LQQVSTRLKSRLRESDMLARLGGDEFTVVLPHLREETDAIHVAKMLLQQLADSFSVGDYE 610 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L +G F + E L+ ++ + EE ++ +++L Sbjct: 611 LHIGASIGVTLFPKDGEDASTLIKNADIAMYKAKDNGRNQ-YRFFEERMNEAVASRLMLE 669 Query: 493 NTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 IR A L QPI + G + +L L G + P +F+ + + Sbjct: 670 GDIREATQNEQFHLEFQPIIDLKNMRLAGAEALLRWLHPRFGELHPREFMSIAEETGNIV 729 Query: 550 RFDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 + +L++ L A + P +VN+ L+ R + ++ + P + Sbjct: 730 QISEWLLQNALNLAAEWQYSRPAGQQPFIAVNMSRRQLISSQHIKRWRDIIRQSEVPPSS 789 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 ++LE+TE + E S + +LH+ G R+++DD+G G ++ LK L ++K+DG+ Sbjct: 790 LVLELTEHNLLNEFEESRRCLIELHQMGVRLSLDDYGHGASSLTLLKDLPISMLKLDGLL 849 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 ++++ T + +++ ++ + +A + +VAE VET QQ A+L + G Y QGYL P Sbjct: 850 IRNLGRQTKEEVLMDALVKMGRAMDMKIVAEGVETPQQLAVLRESGCDYGQGYLFSPP 907 >UniRef50_B2JE89 Diguanylate cyclase/phosphodiesterase n=58 Tax=Burkholderia RepID=B2JE89_BURP8 Length = 791 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 89/424 (20%), Positives = 164/424 (38%), Gaps = 15/424 (3%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQE-------AGKSFCCLRIDNLEFMSRHYGLMM 371 R D LT L N + Q+ E + + +DN + ++ G Sbjct: 328 EREMTHLVEFDLLTGLRNRYSTLQSLRHEVGQPVNVGHLAILFIDLDNFKTVNDTLGHNA 387 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 ++ L + + L ++ G E ++V+ G + E R + + ++ Sbjct: 388 GDIVLQMTASRLADAVADAGALSRIGGDEFVVVIKGDDVEKRAVTLAEAIIDVFAKPFEV 447 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + E+ LL + + +S + Sbjct: 448 RGSSFVLHASIGIALYSVANESEIDLLKKADLAMYSAKDAGKN-CYQFYSPHLSHRADHL 506 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + +R AL L L QP + G++ ++ G++ ++F+P+ Sbjct: 507 MKWEQQLRVALADQQLFLAYQPKIDLARRCITGFEALVRWNHPQHGLIPANEFIPVAEST 566 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L V+ + + LA +VN+ + + ++ I + I+ Sbjct: 567 GLIVPIGDFVIRTACRQLAQWQQQGYDTLSLAVNISAVQFWRGDLYETISHAIEETGIAA 626 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LEITE + I L + G RIA+DDFGTGY++ L R D +K+D Sbjct: 627 RRLELEITETAMMEYPDLVSEKIFALKRLGVRIALDDFGTGYSSLSYLNRFSVDTLKVDR 686 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+ I + ++V +I +LA++ L+VV E ET++Q A L LG QG+L RP Sbjct: 687 SFVQAIPGDRSVCVMVTAIVNLARSLGLTVVVEGTETEEQIAWLAALGHIEAQGFLFSRP 746 Query: 725 QPLA 728 P Sbjct: 747 VPAE 750 >UniRef50_D2LY77 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LY77_BACS4 Length = 886 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 87/431 (20%), Positives = 185/431 (42%), Gaps = 18/431 (4%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSR 365 + + A D LT LPN + ++ E + + ++ + ++ Sbjct: 451 LQKSEEKLQKLAYYDMLTGLPNRQHFQKYLESLLQSEANKKAPTIAVMFVDLNQFKQIND 510 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM---VNILN 422 G + ++ + L+ L +E K+++L G E ++VL+ + ++ + L Sbjct: 511 TLGHKVGDELLKLVSNKLMKLEKEKIKVFRLGGDEFVIVLTE-ADKKEVKRFGGKLQRLF 569 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + I NN L + + + +TL L+ + + ++ + Sbjct: 570 AEPIILNNMSLYVTASFGVSMYPKDGDTLDRLVRFADMAMYNAKEKGRN-YIQFFDQSMK 628 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFL 539 ++++++ N +R AL++ L+ QP N + G + ++ + G ++P KF+ Sbjct: 629 ADFSERMMINNGLREALERNQFELHYQPKVNAKTDEMSGMEALMRWHHPELGNVSPGKFI 688 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L + D L K +VN+ ++ + R Sbjct: 689 PIAEESGLILKIDEWGLLQACKQNKQWQDAGLKKVPVAVNISAKHFYHGYLSEMVKRALT 748 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + Q + +EITE + ++ + L + G +++IDDFG G+++ +L +L Sbjct: 749 ISGLEAQYLQIEITESVFIKKMDDVIHTLNGLQEMGVKVSIDDFGNGFSSLNQLLKLPIS 808 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +K+D F+++I N A +V+ I +LA + L+VV E VET+ + ALL + LQG Sbjct: 809 EVKLDREFIRNIGENEKQASMVKVIIELAHSLQLNVVGEGVETEDELALLQQYHCDELQG 868 Query: 719 YLIGRPQPLAD 729 +L +P ++ Sbjct: 869 FLFSKPVQASE 879 >UniRef50_B3E3Z2 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E3Z2_GEOLS Length = 651 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 103/440 (23%), Positives = 188/440 (42%), Gaps = 19/440 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRI 357 + +R+ E N R H A D LT LPN L A + + L + Sbjct: 177 IETIRLRTAHEHANARIHRLAFFDTLTGLPNRNHLAGLLADSIAAAKQNNNQLALFLLDL 236 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ YG + + + L L+ ++ + + G + +++ T +++++ Sbjct: 237 DYIREINETYGHETGDWILVQVAQKLCGLVDDSALVARFGGDDFIIIYEQ-STVHKVRNL 295 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + ++ + + + +T LL + + Sbjct: 296 AKHILAAIKQPFLFDARSFSISGSIGIAFYPDDADTPTDLLSRADLAMSKVKGAGGG--Y 353 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + +S T+++ L+ + AL +G+L LY QP G + +L G Sbjct: 354 CLYKRDMSHLLTRKLELVQRLECALAEGNLHLYYQPKVELYAGMMVGAEALLRWQDPVLG 413 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR--FSVNLMPLTLLQKNI 589 ++P +F+P+ L + VL++ + + + R +VN+ Sbjct: 414 WVSPAEFIPVAEGRGLMPQIGEWVLKTACQHIKSWKSKGLNCRGKIAVNVSAQQFGDPYF 473 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R+ R+ + + P + LE+TE + E ++ L GF IAIDDFGTGY++ Sbjct: 474 LERVARVLEETGVLPSNIELELTESCLMDDPERMSEIMKSLRGMGFSIAIDDFGTGYSSL 533 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKR D +KID FVK+++ + D I+ +I +AK L VAE VET++Q+ L Sbjct: 534 AYLKRFPIDTLKIDQTFVKNMLDDNNDKAIISTILAIAKQMGLMTVAEGVETEEQRCALQ 593 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 KLG QGY RP+P+ D Sbjct: 594 KLGCVLAQGYYFCRPEPMDD 613 >UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QP03_9BACI Length = 802 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 105/536 (19%), Positives = 202/536 (37%), Gaps = 17/536 (3%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + E+ + +++ + + +V I F G + Sbjct: 258 QVREQLQQSEELYRKVIEFLPDPIIIQADGVIHYMNPAGLEMVKAERIDFVKGKRLSDFL 317 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 + L G + E + + S L ++R + ++ Sbjct: 318 EKREQQENEWVLTS------LCGEQKEVDVKAMSIDYYGQSAQFL-IIRDLSEQKSKEKK 370 Query: 322 WHLQALTDPLTLLPNFRALEQAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DP+T+LPN L + ++ + + ++ +F++ G ++ Sbjct: 371 IEFMAQYDPITVLPNRNYLREKLNELLLRDVSIAVLLVDVNRFQFINDFLGHSNGDELLK 430 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR--LQHMVNILNSRQIHWNNTGLDM 435 + R L + E L ++ E +V + + E L ++ L + L++ Sbjct: 431 EVARRLKKIQSEQVFLSRIGDDEFAVVYTYNKKEEVNWLLKKLDRLLNEPYFIAGEKLNV 490 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 +++ LL + + + + + K++ L N + Sbjct: 491 TINIGVSYAHDADRSVETLLSNAGKAVYYAKTNGVHRVVQ-YQSKLHDIFVKRIRLENDL 549 Query: 496 RTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 +TAL+ + LY QP N + + ++ G+++P +F+P+ + N+ R Sbjct: 550 QTALENNEFSLYYQPKVNVQSGTVSVEALIRWKHPQLGMVSPAEFIPIAEETNMIERIGK 609 Query: 554 QVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL+ L T + +VNL + ++ + + + P + + EIT Sbjct: 610 WVLQQSCDDLKTLHKSGFSALKMAVNLSARQFMDSSLKATVSNILTSADVPPSSFVFEIT 669 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + ++ L + G IAIDDFG Y++ L R D +KID F++D Sbjct: 670 ETTIMKEPNEVIRILQALKEQGIMIAIDDFGVSYSSLNYLNRFPIDAVKIDRSFIRDFHE 729 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 N A IV +I LA +LSV AE VET++Q L + G +QGY RP PL Sbjct: 730 NRKGAEIVEAIISLAHRLNLSVTAEGVETEEQVRFLLEKGCDEMQGYYFSRPVPLE 785 >UniRef50_B2JAQ1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2JAQ1_NOSP7 Length = 720 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 90/434 (20%), Positives = 174/434 (40%), Gaps = 18/434 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEF 362 + + + D LT LPN Q EQ + L +D Sbjct: 268 IDKRQQAEAQLLHVVFHDSLTGLPNRTLFIQRLEQGIERVKKQPSVGLALLYLDLDRFGV 327 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + R L ++ + +L E ++L + + +L Sbjct: 328 VNNSLGYTSGDQLLIAFARRLEICVRSQDIFARLEADEFGILLEDIQALSDVIGFAQLLQ 387 Query: 423 SR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + + + E Q L+G + ++ + + + Sbjct: 388 EKLKMPFYLGSQEVFISASIGIASTTVGYEQAQILVGNANIAMHRAKSLGKA-SYKVFDT 446 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 + +T K + L + + A++ + L QPI + G++ ++ G++ P Sbjct: 447 PMFMETNKLLQLESDLERAVENQEFRLAYQPIVSLSTNNLIGFEALIRWQHPRRGLVFPG 506 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLLQKNIAGRII 594 +F+ + + + VL + L SVN+ L Q N+ I Sbjct: 507 EFISVAEETGMIVDISYWVLREACRQLYVWQQKFLNDQLAISVNISSKQLSQSNLNQEIR 566 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++ + ++ + + LE+TE N++S++ + QL + G ++ +DDFGTGY++ L Sbjct: 567 QILEETNLDARNLKLELTETTIVENSQSTIEKLWQLKEMGVQLHVDDFGTGYSSLSYLHH 626 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 ++KID F+ I TN+ +A IV +I LA + V AE +ET +Q LL KL + Sbjct: 627 FPISVLKIDRSFINRIDTNSKNAEIVSTIITLAHNLGIDVTAEGIETLEQLELLQKLQCK 686 Query: 715 YLQGYLIGRPQPLA 728 Y QGYL +P + Sbjct: 687 YGQGYLFSKPVKAS 700 >UniRef50_Q5P652 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P652_AZOSE Length = 1020 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 101/571 (17%), Positives = 202/571 (35%), Gaps = 27/571 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--LLLCTPYENDFIAGY 242 + ++ S + + E+R L A +V + + Y Sbjct: 439 AVLEVLASAAGTALARQLASDRLRQSEERFRVLVEETAQAVWEGDAAGALVVHSPSWSAY 498 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLT------WAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 F + G +P AV+ + + + A Sbjct: 499 TGQTFEEMAGFGWLDAIHPDDRARVEREWRAAVAGRRVFDTELRLRHYLGEWRWANVRAA 558 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------- 346 L + M + +R H AL D LT LPN R + + E Sbjct: 559 PLVGADGEVEKWVGMNIDITDRKEAEQRAHEAALHDSLTALPNRRLIFEYAEHLLAAAGR 618 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + +F + ++ + ++ YG ++ + L +++ + + +L G E +++L Sbjct: 619 KHSQGAFLFIDLNRFKPVNDLYGHEAGDRLLQEVACRLKAGVRKEDIIGRLGGDEFIVLL 678 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 E ++ + S+ + + + F + T+ L+ Sbjct: 679 PYLEQTQEAMNIAQYIVESVSQPFMIRDAEVSVSPSIGISLFPQHGMTVDGLIRAADLAM 738 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGY 519 Q+ A E + + + ++ AL + L+ QP+ + G Sbjct: 739 YQAKHCSRG-AYCVYEPNLEHRDDVSTSVEGRLKQALAKNTFALHYQPVIDLRTGAVRGA 797 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVN 578 + +L D + P F+P+ L V + + ++N Sbjct: 798 EALLRFAGEDCEALGPGLFIPVAESSGLIGAIGEWVTAEACRQHIAWAAEGLEPVPIAIN 857 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + P+ Q+ R+ + + ++P +++LEITE NA+ + + + G ++ Sbjct: 858 VSPVQFRQRRFVQRLADILRDGGMNPASLLLEITESAVMDNADDAAGILAAVRALGVKVV 917 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +D FGTG ++ L L D +KID FV+ I ++ +V ++ L + L VVAE Sbjct: 918 LDGFGTGCSSLAHLGSLPLDKLKIDRSFVEGIGQDSTSRAVVEAVIALGRTLGLEVVAEG 977 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +E+ A L G QGY +GRP P + Sbjct: 978 IESGDVLAYLEAHGCDQGQGYFLGRPLPRDE 1008 >UniRef50_B1J9N2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pseudomonas RepID=B1J9N2_PSEPW Length = 533 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 95/426 (22%), Positives = 177/426 (41%), Gaps = 12/426 (2%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----QEAGKSFCCLRIDNLEFMSRHYGL 369 + A D +T LPN +Q Q G + L ID + ++ G Sbjct: 93 ELRSSQAQLERLAHYDTITGLPNRVLFQQQLADAILQGDGLAVLMLDIDGFKQVNDSLGH 152 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE--GRLQHMVNILNSRQIH 427 M ++ L + +++ +L G E + +L G + + ++ H++ R Sbjct: 153 AMGDLLLQQATARFLQELASADRVCRLGGDEFVFMLRGTQGQVSHQVAHLL-RCLQRPFD 211 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N + + R + E + LL + A ++ + + Sbjct: 212 LNGSTALVTGSIGLARCPQHGEDVGSLLRHADTAMYAAKESGRN-AWRPYHTDMTARLQQ 270 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L +R AL + L+ QP + +G + +L G+++P +F+PL + Sbjct: 271 RLELERNLRRALQANEFELWYQPKVDLFSGCLQGVEALLRWRDPVHGLVSPAEFIPLAER 330 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L +VL +A + + ++N+ L + + + + + + + ++ Sbjct: 331 TGLIIPLGERVLALACAQMAAWRDEDRIPGPMAINVAALQIERSDYVSSLAQALECHGLA 390 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + +EITE + + + + QL G A+DDFGTGY++ L+ L D +KID Sbjct: 391 PSLLEVEITESLLMESQQQACEVLAQLQAMGVTTAVDDFGTGYSSLAYLRALPIDHLKID 450 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 F+KD+ + + R+I DL A + AE +ETQ+Q L G QGYL+ R Sbjct: 451 RAFIKDLPDDDDAVAVARAIIDLGHALGFRITAEGIETQEQYDFLRNAGCDQGQGYLLAR 510 Query: 724 PQPLAD 729 P P AD Sbjct: 511 PMPAAD 516 >UniRef50_C9Y997 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y997_9BURK Length = 774 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 119/720 (16%), Positives = 231/720 (32%), Gaps = 19/720 (2%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFH 80 + I + I S+ L W + + + + WR + + Sbjct: 46 MLANIASAGLILWTFSPDISWELLLWFAGILTVCLFALRSWRRSLGRQFTQASPGTIHKA 105 Query: 81 LSFLQTAVMLGSQT-FVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 + + + + G+ + S Sbjct: 106 TWHAIVLGGVWAFIPVFWFPGASDSQQLTIATLLTGMIGAGGFVLNPLPLASVAYVTVFS 165 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + + + + +++ + L+ TA L ++ +L Sbjct: 166 ASALAALWRSGNPAYSGVAALVSVYAPLVTLAALTAWRKSMALINAESQSQQQEQTISVL 225 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + L +S L L E + + I G Sbjct: 226 LSDFEQNAGDALWETDAAGRLVHISPKLCELLQVSEEKVSGNTWMSILVPIDASGAVT-- 283 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 + L + G L +V Sbjct: 284 --LSEALASGKPFKELQISFKSPSGNRHIQLNGKALQNDEGAFSGWRGVVSDVTEKVQST 341 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQE----AGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A TD LT L N L + ++ + + +D + ++ +G + Sbjct: 342 NLLRQLAHTDSLTGLTNRFKLREFLTEKVAGKHPLALLSIDLDRFKAINDRHGHSVGDDV 401 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTG 432 +R I + L + + +L G E +VL P + + L + + Sbjct: 402 LRLIAQRLRQQLGPQTMIARLGGDEFAVVLVEPGDIQQAPTLGRRVVHLLQEPLDISVRR 461 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L +G G+ TL L+ Q + + + ++ L Sbjct: 462 LTVGGSVGLTISRGDVVTLDELMVQADIALYAAKDAGRGQCVA-YTPELGAVNQRRATLE 520 Query: 493 NTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R AL Q +L LY QP + + G + ++ G ++P +F+P+ Q + A Sbjct: 521 YGLRKALHQQELQLYWQPKVDLKTWKIVGAETLMRWRHPVLGWISPGEFIPIAEQSGMIA 580 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 L + H G + SVN+ + L + + + ++P + L Sbjct: 581 ALGSWALLEACRM---HSSALAGLKVSVNVSSMQLRDDSFLSVLQDAMDEFQVNPGQLEL 637 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE +A+ ++ + + K G ++A+DDFGTGY++ L+ D +KID FV + Sbjct: 638 ELTESVFLESADHALAMLHAIKKTGVKLAMDDFGTGYSSLSYLRSFPFDTLKIDRAFVIE 697 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V +V IT LA+ + V E VET QQ + + G +QGY++ +P PL + Sbjct: 698 LVEKKDAEAVVHMITGLAQTLGMRTVCEGVETPQQLEAIQRAGCDEVQGYIVAKPMPLQE 757 >UniRef50_B6AQB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Leptospirillum sp. Group II RepID=B6AQB4_9BACT Length = 878 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 94/566 (16%), Positives = 207/566 (36%), Gaps = 34/566 (6%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 ++ +L +R L + + + + + + F + Sbjct: 303 LLTRIAEAMSYALDDFERGQDLFLTSLVFDAVPEGIFITDVEGRITRVNEAFCRLSGFSF 362 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQN--------------FLQGVETEYSLAFILAVLIS- 300 G+L + A +L + ++ + Y + + ++ Sbjct: 363 GELLGREADTLTAGLEKGILCASIRDAIDQRGTVEGIFELIRKDASSYMVEATITLVEEP 422 Query: 301 --FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 S ++ +++ R+ A D LT L N AL + + Sbjct: 423 GRDSRHVVLLLKDVTAKMERERQIWRLANIDDLTGLLNRTALIERLANEMEKSRRNQGAM 482 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L D+ + ++ G ++ I L ++ + + +L G E ++V+S E+ Sbjct: 483 ALLFLDFDDFKGINDTLGHSAGDSFLKVIGHRLSGSVRPTDIVARLGGDEFVVVVS-LES 541 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + ++ + + + + + + E+++ LL + Q+ Sbjct: 542 DEKILSFAQKILDILGAPVSIQSQTVQTSVSVGIATYPRDAESVEDLLRKADIAMYQAKN 601 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + + ++T L +G L+ QP + + G + + Sbjct: 602 KGKN-TWQFFNVEMEERIRLRFEQEQMLKTGLQEGAFFLHFQPQIDVFRRRLVGVEALAR 660 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 GG + P F+PL + F V++ + + + R VN+ Sbjct: 661 WPVPSGGTIGPASFIPLAEETGTILAFGEWVIQEAFRVIQFWSASGRPRIRVGVNVSSRQ 720 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + R+ + + E+TE + E++ + L + G RIAIDDFG Sbjct: 721 FWSPTFWTFLREILSRHAELTRWLTFELTETVLMRDPETAGEQLSWLKELGIRIAIDDFG 780 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L R D IK+ FV + + D +V++I + K+ L++V E ET++ Sbjct: 781 TGYSSLSYLSRFPVDEIKVSQEFVMRMAKSPRDLKLVKTIIQMGKSLRLNLVGEGAETEE 840 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 + +L LG +QG+ + RP P+++ Sbjct: 841 EVRMLEGLGCHVIQGFALSRPLPVSE 866 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 781 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 771 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 766 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 761 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 759 0.0 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 757 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 756 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 756 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 755 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 754 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 753 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 752 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 749 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 749 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 747 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 746 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 744 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 744 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 743 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 741 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 740 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 740 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 739 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 739 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 739 0.0 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 739 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 739 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 738 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 738 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 736 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 735 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 735 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 734 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 734 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 732 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 732 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 732 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 732 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 732 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 730 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 730 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 730 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 730 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 729 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 728 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 727 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 727 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 727 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 726 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 725 0.0 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 725 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 725 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 725 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 724 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 724 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 723 0.0 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 723 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 723 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 723 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 722 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 722 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 722 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 722 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 722 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 722 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 722 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 722 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 721 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 720 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 720 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 718 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 718 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 717 0.0 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 717 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 717 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 717 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 715 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 715 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 715 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 714 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 714 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 714 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 713 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 712 0.0 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 712 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 710 0.0 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 710 0.0 UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 710 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 709 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 709 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 708 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 707 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 707 0.0 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 707 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 706 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 704 0.0 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 704 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 703 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 703 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 702 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 702 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 701 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 701 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 701 0.0 UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 700 0.0 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 700 0.0 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 699 0.0 UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 699 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 699 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_P72843 Regulatory components of sensory transduction sy... 699 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 699 0.0 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 698 0.0 UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/P... 698 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 698 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 698 0.0 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 697 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 697 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 697 0.0 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 697 0.0 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 696 0.0 UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinom... 696 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 696 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 695 0.0 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 695 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 694 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 694 0.0 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 692 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 692 0.0 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 692 0.0 UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_A0YBW6 Predicted signal transduction protein containing... 691 0.0 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 691 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 691 0.0 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 691 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 690 0.0 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 690 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 690 0.0 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 690 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 690 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YK... 689 0.0 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas m... 689 0.0 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 688 0.0 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 688 0.0 UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 687 0.0 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 687 0.0 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 687 0.0 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 687 0.0 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 686 0.0 UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica ... 686 0.0 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 686 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 685 0.0 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 685 0.0 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 685 0.0 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 685 0.0 UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanoth... 685 0.0 UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 ... 684 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 684 0.0 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 684 0.0 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 684 0.0 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 684 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 684 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 684 0.0 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotole... 683 0.0 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 683 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 682 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 682 0.0 UniRef50_B4RTU5 Sensory box protein n=2 Tax=Alteromonadales RepI... 682 0.0 UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 681 0.0 UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax... 681 0.0 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 681 0.0 UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya... 681 0.0 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 681 0.0 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q2SG37 Predicted signal transduction protein containing... 680 0.0 UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 680 0.0 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 679 0.0 UniRef50_A6CIW9 Sensory box protein/GGDEF domain protein n=1 Tax... 679 0.0 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 679 0.0 UniRef50_B3E9P2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 678 0.0 UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 678 0.0 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 678 0.0 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum... 678 0.0 UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 677 0.0 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 676 0.0 UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 676 0.0 UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (... 675 0.0 UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 675 0.0 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 675 0.0 UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylo... 675 0.0 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 674 0.0 UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 674 0.0 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Ch... 674 0.0 UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 673 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 673 0.0 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 673 0.0 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 673 0.0 UniRef50_C6X941 Response regulator receiver modulated diguanylat... 673 0.0 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 673 0.0 UniRef50_Q2BJI5 Regulatory component of sensory transduction sys... 673 0.0 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 672 0.0 UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 672 0.0 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 672 0.0 UniRef50_Q2BRN8 Signal transduction protein containing membrane,... 672 0.0 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 671 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_A6LW88 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 671 0.0 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 671 0.0 UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudov... 671 0.0 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 671 0.0 UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales b... 671 0.0 UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax... 671 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_C1SL51 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 671 0.0 UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_B4W5F5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 670 0.0 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitrati... 670 0.0 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillu... 670 0.0 UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 670 0.0 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 669 0.0 UniRef50_Q3IEE0 Putative orphan protein; putative conserved doma... 669 0.0 UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_Q1N453 Predicted signal transduction protein containing... 668 0.0 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 668 0.0 UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum s... 668 0.0 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 668 0.0 UniRef50_Q2S9L1 Predicted signal transduction protein containing... 668 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 668 0.0 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 668 0.0 UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 668 0.0 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 668 0.0 UniRef50_C8WTB0 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 668 0.0 UniRef50_A1WX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 668 0.0 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 667 0.0 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacilla... 667 0.0 UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 666 0.0 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 666 0.0 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 666 0.0 UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 666 0.0 UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase wit... 665 0.0 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 665 0.0 UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 665 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 665 0.0 UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_Q1H236 Response regulator receiver modulated diguanylat... 664 0.0 UniRef50_A1ATR3 Response regulator receiver modulated diguanylat... 663 0.0 UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/P... 663 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B8GQW3 Signal transduction protein containing a membran... 663 0.0 UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_Q5ZVT3 Inner membrane protein PLUS sensory box protein ... 663 0.0 UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (... 663 0.0 UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter... 663 0.0 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 663 0.0 UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_C3XA65 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 662 0.0 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 662 0.0 UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 662 0.0 UniRef50_C6BM04 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacte... 662 0.0 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 662 0.0 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_C4WM42 Diguanylate cyclase (GGDEF) domain-containing pr... 662 0.0 UniRef50_D1B584 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 662 0.0 UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 662 0.0 UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillu... 661 0.0 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Ta... 661 0.0 UniRef50_Q483V3 Sensory box/GGDEF/EAL domain protein n=5 Tax=Alt... 661 0.0 UniRef50_Q220B0 Response regulator receiver modulated diguanylat... 661 0.0 UniRef50_C1DD31 Predicted signal transduction protein containing... 661 0.0 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 660 0.0 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_Q07ZQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_Q2SPM3 Predicted signal transduction protein containing... 660 0.0 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 660 0.0 UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (... 659 0.0 UniRef50_Q2VYM7 Predicted signal transduction protein containing... 659 0.0 UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ol... 659 0.0 UniRef50_A1U2T3 Response regulator receiver modulated diguanylat... 659 0.0 UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/P... 659 0.0 UniRef50_Q3JAB6 Response regulator receiver modulated diguanylat... 659 0.0 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 659 0.0 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 659 0.0 UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 659 0.0 UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_A3WPN1 Signaling protein with a ligand-binding sensor d... 658 0.0 UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_B2J301 Response regulator receiver modulated diguanylat... 658 0.0 UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax... 658 0.0 UniRef50_UPI00016AFAA6 predicted signal transduction protein con... 657 0.0 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 657 0.0 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_B3E7G7 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 657 0.0 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_A8UUX8 Preprotein translocase ATPase subunit n=1 Tax=Hy... 656 0.0 UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepI... 656 0.0 UniRef50_B8GNC0 Signal transduction protein containing a membran... 656 0.0 UniRef50_A5IG24 Sensory box protein/GGDEF/EAL domains n=6 Tax=Le... 656 0.0 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 656 0.0 UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0... 656 0.0 UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 655 0.0 UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 T... 655 0.0 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 655 0.0 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 655 0.0 UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Ta... 655 0.0 UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=B... 654 0.0 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 654 0.0 UniRef50_B6R9S7 Response regulator receiver modulated diguanylat... 654 0.0 UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protei... 654 0.0 UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacte... 654 0.0 UniRef50_D1REK0 Putative response regulator, PAS/GGDEF/EAL domai... 654 0.0 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 654 0.0 UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria ... 654 0.0 UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulate... 654 0.0 UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_D1U433 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuni... 653 0.0 UniRef50_D2UCH8 Hypothetical two-component system sensor protein... 653 0.0 UniRef50_C4KD26 Response regulator receiver modulated diguanylat... 653 0.0 UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 653 0.0 UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 653 0.0 UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter... 653 0.0 UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q21ZG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_D1RFR0 Response regulator/GGDEF domain/EAL domain prote... 653 0.0 UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_B0SAR7 Signal transduction protein n=2 Tax=Leptospira b... 652 0.0 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 652 0.0 UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax... 652 0.0 UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_Q2RTE0 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acineto... 651 0.0 UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_C6BS66 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_A8FY98 Signal transduction protein containing a membran... 651 0.0 UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylat... 651 0.0 UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (... 651 0.0 UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwell... 651 0.0 UniRef50_Q07XP4 Response regulator receiver modulated diguanylat... 650 0.0 UniRef50_C6BSB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_C4KCC9 Response regulator receiver modulated diguanylat... 650 0.0 UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 649 0.0 UniRef50_C6N027 Putative uncharacterized protein n=1 Tax=Legione... 649 0.0 UniRef50_B3PKS7 Diguanylate cyclase/phosphodiesterase domain 2 (... 649 0.0 UniRef50_A5UVR9 Response regulator receiver modulated diguanylat... 649 0.0 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_A0YPT5 Serine/Threonine protein kinase and Signal Trans... 649 0.0 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 649 0.0 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 648 0.0 UniRef50_C6MV72 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 648 0.0 UniRef50_Q2BQ91 Multisensor diguanylate cyclase/phophodiesterase... 648 0.0 UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 ... 648 0.0 UniRef50_C6XE67 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 648 0.0 UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_A6W3H5 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_C6WYR4 Response regulator receiver modulated diguanylat... 647 0.0 UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_Q1JVN0 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_Q72EZ6 Sensory box/GGDEF domain/EAL domain protein n=3 ... 647 0.0 UniRef50_A6X5M4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rh... 647 0.0 UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 647 0.0 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 647 0.0 UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_A5V028 Response regulator receiver modulated diguanylat... 647 0.0 UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 647 0.0 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_Q21IJ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 646 0.0 UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenz... 646 0.0 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 646 0.0 UniRef50_Q2SDR7 Predicted signal transduction protein containing... 645 0.0 UniRef50_B3E7H1 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase wit... 645 0.0 UniRef50_A3YAL9 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 645 0.0 UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_A1SBS3 Signal transduction protein containing a membran... 645 0.0 UniRef50_Q8DHT6 Tll1859 protein n=1 Tax=Thermosynechococcus elon... 645 0.0 UniRef50_A0YWR3 Putative uncharacterized protein n=1 Tax=Lyngbya... 645 0.0 UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya... 645 0.0 UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylo... 645 0.0 UniRef50_Q1QZB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine ... 644 0.0 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 644 0.0 UniRef50_A6Q9W1 Putative uncharacterized protein n=1 Tax=Sulfuro... 644 0.0 UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Ta... 644 0.0 UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with respo... 644 0.0 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 643 0.0 UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseu... 643 0.0 UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 643 0.0 UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax... 643 0.0 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 643 0.0 UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q2BJL1 Signal transduction protein containing membrane,... 643 0.0 UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q07VY4 Response regulator receiver modulated diguanylat... 643 0.0 UniRef50_C6X7M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_B9Z647 Response regulator receiver modulated diguanylat... 642 0.0 UniRef50_UPI0001C42794 probable signaling protein n=1 Tax=Bacill... 642 0.0 UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF s... 642 0.0 UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 642 0.0 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 642 0.0 UniRef50_C0QA93 Signal transduction family protein (GGDEF domain... 642 0.0 UniRef50_Q4ZXA9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 642 0.0 UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 642 0.0 UniRef50_A1SWE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacill... 641 0.0 UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF a... 641 0.0 UniRef50_Q39XT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 641 0.0 UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 641 0.0 UniRef50_A8URG3 Signal transduction protein containing a membran... 641 0.0 UniRef50_B9ZLS8 Response regulator receiver modulated diguanylat... 641 0.0 UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/P... 641 0.0 UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 640 0.0 UniRef50_A0YZ09 Putative uncharacterized protein n=1 Tax=Lyngbya... 640 0.0 UniRef50_Q1NS23 PAS:GGDEF:EAL:Response regulator receiver n=4 Ta... 640 0.0 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 640 0.0 UniRef50_C5BN58 Predicted signal transduction protein, with PAS,... 640 0.0 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 640 0.0 UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_Q1NX89 PAS:GGDEF:EAL:Response regulator receiver n=4 Ta... 640 0.0 UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extra... 640 0.0 UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 640 0.0 UniRef50_A3QBK2 Response regulator receiver modulated diguanylat... 639 0.0 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 639 0.0 UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas ... 639 0.0 UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='N... 639 0.0 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 639 0.0 UniRef50_C6P797 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_A3ESX6 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Su... 639 0.0 UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 639 0.0 UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 639 0.0 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thioo... 638 0.0 UniRef50_C6MGV8 Response regulator receiver modulated diguanylat... 638 0.0 UniRef50_B0CBA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 ... 638 0.0 UniRef50_A6CKI1 Sensory box/GGDEF family protein n=1 Tax=Bacillu... 638 0.0 UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/P... 638 0.0 UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 637 0.0 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 637 0.0 UniRef50_C1I4R6 Diguanylate cyclase/phosphodiesterase domain 2 n... 637 0.0 UniRef50_Q21WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_Q0A8D0 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_A6EZP7 Two-component response regulator n=4 Tax=Marinob... 636 0.0 UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 0.0 UniRef50_A3JAM8 Response regulator receiver modulated diguanylat... 636 e-180 UniRef50_C6WW34 Response regulator receiver modulated diguanylat... 636 e-180 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 636 e-180 UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 636 e-180 UniRef50_C7QU84 Response regulator receiver modulated diguanylat... 635 e-180 UniRef50_Q1NTC4 PAS:GGDEF:EAL:Response regulator receiver n=3 Ta... 635 e-180 UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromatic... 635 e-180 UniRef50_B2J1V8 Response regulator receiver modulated diguanylat... 635 e-180 UniRef50_Q2NCL2 Sensory box/GGDEF family protein n=2 Tax=Erythro... 635 e-180 UniRef50_A8GZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_C0N5Y8 Putative uncharacterized protein n=1 Tax=Methylo... 635 e-180 UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Co... 635 e-180 UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 ... 635 e-180 UniRef50_A0YGV9 Putative uncharacterized protein n=1 Tax=marine ... 635 e-180 UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_Q21VJ9 Response regulator receiver modulated diguanylat... 635 e-180 UniRef50_Q1Q7M3 Similar to ScrC (Sensory box/GGDEF family protei... 635 e-180 UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL ... 634 e-180 UniRef50_Q2I6K9 Multidomain signal-transduction protein n=1 Tax=... 634 e-180 UniRef50_Q2W5V0 Predicted signal transduction protein containing... 634 e-180 UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photoba... 634 e-180 UniRef50_B8CTT8 Sensory box/GGDEF/EAL domain protein n=1 Tax=She... 634 e-180 UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_A4X020 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 633 e-180 UniRef50_Q1K008 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Nep... 633 e-180 UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/P... 633 e-180 UniRef50_A4TYP2 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 633 e-179 UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/P... 632 e-179 UniRef50_Q2W603 Predicted signal transduction protein containing... 632 e-179 UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain prot... 632 e-179 UniRef50_B1XK84 Two-component response regulator (ABC transporte... 632 e-179 UniRef50_A0LBX0 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_Q1N484 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 631 e-179 UniRef50_Q2G9J7 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 631 e-179 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 631 e-179 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_Q1YPY3 PAS:GGDEF protein n=1 Tax=gamma proteobacterium ... 631 e-179 UniRef50_C6E953 Response regulator receiver modulated diguanylat... 631 e-179 UniRef50_C3X4C3 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_B9Z392 Response regulator receiver modulated diguanylat... 631 e-179 UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS... 631 e-179 UniRef50_Q984Y8 Mll7787 protein n=2 Tax=Mesorhizobium RepID=Q984... 631 e-179 UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_A2SCH7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Me... 630 e-179 UniRef50_C0GP21 Response regulator receiver modulated diguanylat... 630 e-179 UniRef50_Q1K260 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_Q31DJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_B8G486 Response regulator receiver modulated diguanylat... 630 e-179 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 630 e-179 UniRef50_UPI0001850D38 diguanylate cyclase/phosphodiesterase wit... 630 e-179 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 629 e-178 UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromob... 629 e-178 UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 629 e-178 UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 629 e-178 UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1... 628 e-178 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 628 e-178 UniRef50_B6BNN5 Ggef/eal/pas/pac-domain containing protein n=1 T... 628 e-178 UniRef50_A4VKH7 Sensory box/GGDEF family protein n=1 Tax=Pseudom... 628 e-178 UniRef50_Q0AMK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 628 e-178 UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromob... 628 e-178 UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythro... 628 e-178 UniRef50_C7MR68 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 628 e-178 UniRef50_Q3IEF5 Putative uncharacterized protein n=3 Tax=Alterom... 628 e-178 UniRef50_A3YH84 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 628 e-178 UniRef50_A1TMD5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 627 e-178 UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (... 627 e-178 UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromob... 626 e-178 UniRef50_B1KF16 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-178 UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-178 UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 626 e-178 UniRef50_B9R6G6 Putative uncharacterized protein n=1 Tax=Labrenz... 626 e-178 UniRef50_D1U5D9 Response regulator receiver modulated diguanylat... 626 e-177 UniRef50_C7RB28 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-177 UniRef50_C4ZNG3 Response regulator receiver modulated diguanylat... 626 e-177 UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-177 UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodi... 625 e-177 UniRef50_Q2S7Q5 Predicted signal transduction protein containing... 625 e-177 UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi ... 625 e-177 UniRef50_Q2N9U3 Sensory box/GGDEF family protein n=3 Tax=Sphingo... 625 e-177 UniRef50_Q3IG16 Putative uncharacterized protein n=2 Tax=Alterom... 625 e-177 UniRef50_B2UJT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_A4C531 Sensory box protein n=1 Tax=Pseudoalteromonas tu... 625 e-177 UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 625 e-177 UniRef50_Q312J4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 625 e-177 UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/P... 625 e-177 UniRef50_C4XGB8 Putative response regulator receiver protein n=1... 624 e-177 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 624 e-177 UniRef50_A4BJS0 Predicted signal transduction protein containing... 623 e-177 UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacill... 623 e-177 UniRef50_B0KTQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax... 623 e-177 UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_Q0A846 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_B6R1T0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 623 e-177 UniRef50_C9RXJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 T... 623 e-177 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 623 e-176 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 623 e-176 UniRef50_Q0AAF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococc... 622 e-176 UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_Q2RWS9 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_A7BZ46 Diguanylate cyclase/phosphodiesterase n=2 Tax=Be... 622 e-176 UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_A4VMP6 Sensory box protein n=1 Tax=Pseudomonas stutzeri... 621 e-176 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 621 e-176 UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/P... 621 e-176 UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=N... 621 e-176 UniRef50_B8KPF2 Response regulator receiver modulated diguanylat... 621 e-176 UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 621 e-176 UniRef50_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 621 e-176 UniRef50_B3PF41 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 621 e-176 UniRef50_C4XMU6 GGDEF domain protein n=2 Tax=Desulfovibrio RepID... 621 e-176 UniRef50_Q8DKE8 Tlr0911 protein n=1 Tax=Thermosynechococcus elon... 621 e-176 UniRef50_A6C049 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 621 e-176 UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacill... 620 e-176 UniRef50_A3J9Q2 Putative uncharacterized protein n=1 Tax=Marinob... 620 e-176 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_C5T452 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_B7KTR4 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_Q1YF74 Possible signaling protein with EAL, GGDEF domai... 620 e-176 UniRef50_B5W9L6 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_Q7NXK6 Putative uncharacterized protein n=1 Tax=Chromob... 620 e-176 UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfuro... 620 e-176 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 619 e-176 UniRef50_B5W2K6 Diguanylate cyclase/phosphodiesterase with PAS/P... 619 e-175 UniRef50_A1K633 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 619 e-175 UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH 619 e-175 UniRef50_C7R9T3 Diguanylate cyclase/phosphodiesterase with PAS/P... 619 e-175 UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 618 e-175 UniRef50_B1WWM4 Putative uncharacterized protein n=2 Tax=Cyanoth... 618 e-175 UniRef50_A4TXR0 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 618 e-175 UniRef50_Q5P4J2 Putative uncharacterized protein n=1 Tax=Aromato... 618 e-175 UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 618 e-175 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 618 e-175 UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 618 e-175 UniRef50_B1HMM5 Sensory box/GGDEF family protein n=2 Tax=Bacilla... 618 e-175 UniRef50_A4JQX8 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Di... 618 e-175 UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative ... 618 e-175 UniRef50_D2L6G6 Response regulator receiver modulated diguanylat... 617 e-175 UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_A5IAE9 Sensory box protein, GGDEF family protein, LssE ... 617 e-175 UniRef50_C4ZM14 Response regulator receiver modulated diguanylat... 617 e-175 UniRef50_A6W0I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Ta... 617 e-175 UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acineto... 617 e-175 UniRef50_C3KQA4 Putative uncharacterized protein n=1 Tax=Rhizobi... 617 e-175 UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 617 e-175 UniRef50_Q139W0 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_C6XCZ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_A5VGA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sp... 616 e-175 UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Pho... 616 e-175 UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Ma... 616 e-175 UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 616 e-174 UniRef50_Q3A254 Periplasmic sensor diguanylate cyclase/phosphodi... 616 e-174 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 615 e-174 UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 615 e-174 UniRef50_C6MQF9 Response regulator receiver modulated diguanylat... 615 e-174 UniRef50_Q2SNY4 Predicted signal transduction protein containing... 615 e-174 UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_C6P3U3 Response regulator receiver modulated diguanylat... 615 e-174 UniRef50_C3MGT7 Putative diguanylate cyclase (GGDEF)/phosphodies... 615 e-174 UniRef50_A0Q1B8 Diguanylate cyclase/phosphodiesterase domain 2 n... 614 e-174 UniRef50_Q1JZ53 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_C1F295 Cyclic diguanylate phosphodiesterase/diguanylate... 614 e-174 UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_A3JAE8 Predicted signal transduction protein containing... 614 e-174 UniRef50_A1TQ27 Periplasmic sensor diguanylate cyclase/phosphodi... 614 e-174 UniRef50_C5V0J9 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_Q2SKH9 Predicted signal transduction protein containing... 613 e-174 UniRef50_C5SBC3 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-174 UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-174 UniRef50_A0YED8 Putative diguanylate cyclase/phosphodiesterase (... 613 e-174 UniRef50_A6F7T4 PAS:GGDEF n=1 Tax=Moritella sp. PE36 RepID=A6F7T... 613 e-174 UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elon... 613 e-174 UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-173 UniRef50_B1WWC9 Putative uncharacterized protein n=2 Tax=Cyanoth... 613 e-173 UniRef50_Q3SK35 Putative diguanylate cyclase/phosphodiesterase (... 613 e-173 UniRef50_C6QG37 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hy... 612 e-173 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_C6WT76 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_C6WUZ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_A1WC44 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 611 e-173 UniRef50_C8X1L9 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_B8DMV5 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_A4A7P9 Sensory box/GGDEF domain/EAL domain protein n=1 ... 611 e-173 UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n... 611 e-173 UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_A2SJS2 Sensory box/response regulator n=3 Tax=Bacteria ... 610 e-173 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 610 e-173 UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Ar... 610 e-173 UniRef50_B8DQX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_Q5P826 Response regulator receiver protein n=1 Tax=Arom... 610 e-173 UniRef50_A0YUF3 Putative uncharacterized protein n=1 Tax=Lyngbya... 610 e-173 UniRef50_C6XK75 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_B8I783 Diguanylate cyclase/phosphodiesterase n=2 Tax=Cl... 610 e-173 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 610 e-173 UniRef50_A6FEH9 Sensory box protein n=1 Tax=Moritella sp. PE36 R... 610 e-173 UniRef50_B7ITK1 Sensory box/ggdef family n=144 Tax=Bacillus cere... 610 e-173 UniRef50_Q07MF6 Diguanylate cyclase/phosphodiesterase with PAS/P... 609 e-172 UniRef50_Q2BQ13 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 609 e-172 UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp... 609 e-172 UniRef50_D0J677 Diguanylate cyclase/phosphodiesterase n=2 Tax=Co... 609 e-172 UniRef50_B4VXK2 Cyclic diguanylate phosphodiesterase (EAL) domai... 609 e-172 UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 609 e-172 UniRef50_Q46PR7 Diguanylate cyclase/phosphodiesterase with PAS/P... 609 e-172 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 608 e-172 UniRef50_B8HRL0 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 ... 608 e-172 UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 608 e-172 UniRef50_Q31JB1 Response regulator receiver modulated diguanylat... 608 e-172 UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desu... 607 e-172 UniRef50_C6HXD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 607 e-172 UniRef50_Q2RNE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 607 e-172 UniRef50_A2SIL3 Signal transduction protein n=1 Tax=Methylibium ... 607 e-172 UniRef50_Q0KC83 Predicted signal transduction protein containing... 607 e-172 UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinoco... 607 e-172 UniRef50_B9MQD5 Diguanylate cyclase/phosphodiesterase with PAS/P... 607 e-172 UniRef50_A4XFJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-172 UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 68... 606 e-172 UniRef50_Q48MD9 Sensory box protein/response regulator n=5 Tax=P... 606 e-172 UniRef50_Q1GVY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-172 UniRef50_C7RC12 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-172 UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=B... 606 e-171 UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 606 e-171 UniRef50_B9MF12 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-171 UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-171 UniRef50_Q12T53 Periplasmic sensor diguanylate cyclase/phosphodi... 606 e-171 UniRef50_C5SQE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-171 UniRef50_Q47VW2 GAF domain/GGDEF domain/EAL domain protein n=1 T... 606 e-171 UniRef50_A1SWA5 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-171 UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonen... 605 e-171 UniRef50_Q0A9N6 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 605 e-171 UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 T... 605 e-171 UniRef50_Q2RU51 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Ma... 604 e-171 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 604 e-171 UniRef50_B5ZH00 Response regulator receiver modulated diguanylat... 604 e-171 UniRef50_C6DFX5 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_Q0A564 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum... 603 e-171 UniRef50_C7R7Z7 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 603 e-171 UniRef50_B1YEJ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_C1AC92 Putative uncharacterized protein n=1 Tax=Gemmati... 603 e-171 UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction ... 603 e-170 UniRef50_A1VFP9 Periplasmic sensor diguanylate cyclase/phosphodi... 603 e-170 UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 603 e-170 UniRef50_C9NJG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 602 e-170 UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 602 e-170 UniRef50_Q7UUK0 Putative uncharacterized protein n=1 Tax=Rhodopi... 602 e-170 UniRef50_A5UZP0 Response regulator receiver modulated diguanylat... 602 e-170 UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodi... 602 e-170 UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 602 e-170 UniRef50_A9BVR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_A7BRN3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 602 e-170 UniRef50_Q8DHG0 Tlr1999 protein n=1 Tax=Thermosynechococcus elon... 601 e-170 UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_B8FTB0 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_A8FVX9 Signal transduction protein containing a membran... 601 e-170 UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 601 e-170 UniRef50_B5ZD56 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_B1XWM7 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_A9KPL6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Cl... 601 e-170 UniRef50_C7RKP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_B6JDG4 Ggdef domain n=1 Tax=Oligotropha carboxidovorans... 601 e-170 UniRef50_A1STY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_A8VZ02 Orn/Lys/Arg decarboxylase, major region n=1 Tax=... 600 e-170 UniRef50_Q3A5U6 Response regulator receiver modulated diguanylat... 600 e-170 UniRef50_B6AQB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_Q0AB93 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 600 e-170 UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_Q07HD2 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Sh... 600 e-170 UniRef50_A7K1J3 Sensory box/GGDEF family protein ScrC (Involved ... 600 e-170 UniRef50_A4A7X6 Sensory box/GGDEF family protein n=2 Tax=unclass... 600 e-170 UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 600 e-170 UniRef50_Q10V30 Response regulator receiver modulated diguanylat... 600 e-170 UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GA... 600 e-170 UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF d... 600 e-170 UniRef50_A4STK2 GGDEF/EAL domain protein n=2 Tax=Aeromonas RepID... 600 e-169 UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_A5PAA5 Sensory box/GGDEF family protein n=1 Tax=Erythro... 598 e-169 UniRef50_A1K8Z7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 598 e-169 UniRef50_A6SXB0 Signal transduction protein n=2 Tax=Oxalobactera... 598 e-169 UniRef50_B8KIB3 Putative uncharacterized protein n=1 Tax=gamma p... 598 e-169 UniRef50_B7L1R8 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus... 598 e-169 UniRef50_Q1NLX3 GGDEF:EAL n=2 Tax=delta proteobacterium MLMS-1 R... 598 e-169 UniRef50_Q2BQB2 Sensory box protein n=1 Tax=Neptuniibacter caesa... 598 e-169 UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT 598 e-169 UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinib... 598 e-169 UniRef50_Q21YJ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 598 e-169 UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 598 e-169 UniRef50_A9WJ06 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 598 e-169 UniRef50_Q1QHQ7 Diguanylate cyclase/phosphodiesterase n=13 Tax=B... 598 e-169 UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Me... 598 e-169 UniRef50_Q486I4 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 597 e-169 UniRef50_Q2RVK9 Putative diguanylate cyclase/phosphodiesterase (... 597 e-169 UniRef50_A3YI96 Sensory box/GGDEF family protein n=1 Tax=Marinom... 597 e-169 UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Bu... 597 e-169 UniRef50_Q2SLT6 Predicted signal transduction protein containing... 596 e-169 UniRef50_Q315P5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 596 e-169 UniRef50_C5V1X8 Response regulator receiver modulated diguanylat... 596 e-169 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 596 e-169 UniRef50_D2LTE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-169 UniRef50_C5BI93 Motility regulator n=1 Tax=Teredinibacter turner... 596 e-169 UniRef50_Q2N9U4 Sensory box/GGDEF family protein n=5 Tax=Sphingo... 596 e-168 UniRef50_B3PCW8 Sensory box/GGDEF domain/EAL domain protein n=1 ... 596 e-168 UniRef50_D0SWD2 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 596 e-168 UniRef50_C5D2S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-168 UniRef50_Q3A5Q2 Response regulator receiver modulated diguanylat... 596 e-168 UniRef50_B5ZG86 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_D1CDW9 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_Q1YK72 Putative sensory protein, diguanylate cyclase n=... 595 e-168 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 595 e-168 UniRef50_B0C8G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_A0L6C9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 595 e-168 UniRef50_UPI0001AEC71A response regulator receiver modulated dig... 595 e-168 UniRef50_B8FI78 Response regulator receiver modulated diguanylat... 594 e-168 UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase... 594 e-168 UniRef50_Q30VT6 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_Q2BIX1 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 594 e-168 UniRef50_A3JIW6 Two-component response regulator n=3 Tax=Marinob... 594 e-168 UniRef50_A0XY04 Sensory box/GGDEF/EAL domain protein n=1 Tax=Alt... 594 e-168 UniRef50_Q58AF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_Q15PZ4 Response regulator receiver modulated diguanylat... 593 e-168 UniRef50_C1F8P8 PAS domain S-box/GGDEF/EAL domain protein n=1 Ta... 593 e-168 UniRef50_Q1N3N5 Sensory box protein n=1 Tax=Bermanella marisrubr... 593 e-168 Sequences not found previously or not previously below threshold: >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 127/656 (19%), Positives = 231/656 (35%), Gaps = 31/656 (4%) Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 +R + Q ++ +G + +L+ P+ + + D Sbjct: 277 GLGWASLVRQDVNTAFAPARQLQQHIWLVGAALGLLFAWLGWLMAGRIARPISLISQAAD 336 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 A + L L + M+V+ + K + Sbjct: 337 KVAGGDLEYELPARLGEGEVAHLSTAIHDMVVNLTHEIKQRKEAEQGLRLSAK----VFE 392 Query: 220 LAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVST 271 ++++ ++ I GY + A+ Sbjct: 393 SNTEAIMITDAEQNIVMVNQAFTQITGYGADEVLGQRPKLLSSGRHGPEFYEAFWHALRA 452 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALT 328 L + + ++ L + + + R + A Sbjct: 453 NDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLDITERKKEEERINYLANY 512 Query: 329 DPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN L EQ + + +D + ++ G + ++ + Sbjct: 513 DVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVA 572 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 L ++ ++ + +L G E + +LS ++ + + + + L + Sbjct: 573 ARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITP 632 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + ET LL Q+ ++ + +++ L +R Sbjct: 633 SIGICIYPDDGETSVELLRNADLAMYQAKDDGRN-NFKFYSPDMNRKALERLKLETFLRV 691 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A+ Q L +Y QP + + G + +L + G ++P F+P+ + L Sbjct: 692 AIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIAEETGLINEIGDW 751 Query: 555 VLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL +VNL L Q N A R++ + + + ++LEITE Sbjct: 752 VLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAGLDAHYLVLEITE 811 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 S ES + +EQL G R+A+DDFGTGY++ RLK L D +KID FV+DIVT+ Sbjct: 812 SMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTD 871 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV + LA A +L V AE VETQ+Q + L + QGYL RP P ++ Sbjct: 872 PNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASE 927 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 771 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 109/657 (16%), Positives = 216/657 (32%), Gaps = 39/657 (5%) Query: 95 FVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIS 154 V LG + R R + D L+ Sbjct: 239 AAVEIFGWSAEEVLGKPYPVAPAERAAEHRKLRE----------LVLQGKRITDVELRRR 288 Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 G + + + + + + I + + Sbjct: 289 RKDGSPIDVSLSAAPICDGSGTPLGVIT---IISDISARKRNEQELVLLKRAMESSINGI 345 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVST 271 + ++ + I GY V F G + + L A Sbjct: 346 TITDATHPDNPII---YVNPAFERITGYGVDEVIDKNPRFLRGDDRDQAELKKLVQAFKE 402 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALT 328 + + + + +A + + ++ + QA Sbjct: 403 EREGCFVLRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQLVYQATH 462 Query: 329 DPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 DPLT LPN L+ + L +DN + ++ G + ++++ Sbjct: 463 DPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAV 522 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMG 436 L ++ + + +L G E ++VL + + + + + + + Sbjct: 523 ANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVT 582 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F + ET+ LL + ++ + +++ L ++ Sbjct: 583 ASIGIALFPTDGETVDALLKNADAAMYHAKEQGKN-NYQFYSAEMNIRVFERLSLETSLH 641 Query: 497 TALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 A+ + LL+ QP + G + ++ + G+++P KF+PL + L Sbjct: 642 RAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGE 701 Query: 554 QVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + R +VNL Q+N+ + + ++PQ + LE+T Sbjct: 702 WVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELT 761 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E AE S + +L G +AIDDFGTGY++ LKR +KID F++D+ Sbjct: 762 ESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTR 821 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + DA +V++I +A + +AE VE +Q L + + +QGY RP + Sbjct: 822 DPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEE 878 Score = 55.4 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 54/200 (27%), Gaps = 25/200 (12%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + +V F + + D + L +L +L +++ + R + S F Sbjct: 21 LLALLLIVFVIELFLMVLLPRTADGGTPLAISLLDALLLVILSAPIIWLSIVRPLRSVAF 80 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGY------LV 244 L L A ++ L + + GY Sbjct: 81 TASL-------------HTDLLLDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEATGR 127 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV- 303 + I+ GK L L ++ + + A L+ + V Sbjct: 128 SLGDILAIRSTGKDNPLLTPLVCCGEEHSRLTCEAEGIRSDGSRFPAALSLSRVQMKGVW 187 Query: 304 CLLYMVRIYHRSEWLNRRWH 323 L +VR S R Sbjct: 188 HFLGIVRDVTESRETGERLR 207 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 766 bits (1980), Expect = 0.0, Method: Composition-based stats. Identities = 105/709 (14%), Positives = 228/709 (32%), Gaps = 37/709 (5%) Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 I G ++ + + ++ A + + T + G+ Sbjct: 157 VILGHGVEHFLVLRPVRSAISRPMVTIPNDASLAQAVTQLRNARADAAIVLGEGDLPPGI 216 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 + RL P + + + ++ Sbjct: 217 ITERDVLRLIAGTGPIPATVGEVASRPLLTITEEDSLLAARAMLEQKHIRHIGITRMDGE 276 Query: 177 LIYNMLFYYLTR-----MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--- 228 L+ + F + + A + S A + + ++++ Sbjct: 277 LVGLLSFSDILATLQYEYVHRLDEALKERDAALLRSRKDLNLARKVIEASLDGIMIVDST 336 Query: 229 --LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + + GY + ++ + + Sbjct: 337 QKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETFYKHMYTVLEAQDYWQGEIWNRR 396 Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y + V+ + + + R A D LT LPN R Sbjct: 397 KNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRLF 456 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + L +D + ++ G + + + ++E + Sbjct: 457 TDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVREGDT 516 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++L + + + + + + ++ L + + + Sbjct: 517 VARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGT 576 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 T++ L+ ++ + ++ ++ +++ + +++R AL + + L Q Sbjct: 577 TVEALIKNADTAMYRAKDLGRN-SYQLYTAAMNARSFERLTMESSLRHALTREEFRLVYQ 635 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 + G + ++ + G+++P F+PL + + VL + + Sbjct: 636 VKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHW 695 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R +VN+ ++ ++ + R + + PQ + LE+TE + + Sbjct: 696 MDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELELTETVLMQRVDEVVA 755 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN-----TLDAMIV 680 ++ L G RI+IDDFGTGY++ LKR+ D +K+D FV DI A IV Sbjct: 756 VLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIV 815 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I +LA L +AE VET +Q L G +QGYLI RP D Sbjct: 816 STIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGED 864 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 109/587 (18%), Positives = 215/587 (36%), Gaps = 29/587 (4%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + +F + N R+++ + + + + ++ ++L Sbjct: 451 VIGVMFFYSNVLNAFTESSQRLLLELVEDIDFALEHFEK-EEQLQLSAQIFAQSSEGIML 509 Query: 228 -----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 ++ I GY R + + A+ T Sbjct: 510 LDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQHDRNFYATMWEAIETEGRWQGEV 569 Query: 280 NFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + Y ++ + + + R A DPLT LPN Sbjct: 570 WNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLPN 629 Query: 337 FRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L + + L +DN + ++ G + ++ + L+ ++ Sbjct: 630 RTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVR 689 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 E + + +L G E +LVL G ++ L +RQ + +++ + Sbjct: 690 EQDTISRLGGDEFVLVLPG-TDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYP 748 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + L ++ + ++ + + + N +R AL++ Sbjct: 749 TDGTDFDTLWRSADAAMYRAKQSGRND-YCFFTTEMQARSARTLQIDNALRRALERNQFS 807 Query: 506 LYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L QP + G++ ++ G PD+F+P+ VL++ ++ Sbjct: 808 LVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQ 867 Query: 563 LATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 L + SVNL + + ++ + + +SP+ + LE+TE A N Sbjct: 868 LRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPL 927 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 +++ I++L K G RI+IDDFGTGY++ LKR +KID FV+D+ +T D IV Sbjct: 928 AAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVS 987 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ LA + + VAE VET++Q L G +QGY + RP Sbjct: 988 AVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQAD 1034 Score = 44.6 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 7/99 (7%), Positives = 16/99 (16%), Gaps = 6/99 (6%) Query: 233 PYENDFIAGYLVPVFFIIFT-LGVGKLRYPFLNLTWAVSTLC--LLNYNQNFLQGVETEY 289 + I GY F ++ + F + Sbjct: 15 NDKLCEIFGYTPEEFGKKGWNELCDTPCAEENRGIESLKRGDIDEFREEKAFRRKNGRNA 74 Query: 290 SLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + L+ V + + Sbjct: 75 IAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRL 113 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 759 bits (1962), Expect = 0.0, Method: Composition-based stats. Identities = 101/566 (17%), Positives = 206/566 (36%), Gaps = 34/566 (6%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFI 249 ++ E+R + A V++ + G+ + Sbjct: 299 EDITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIG 358 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLC--LLNYNQNFLQGVETEYSLAFILAVL---ISFSVC 304 + P L + L L + + A Sbjct: 359 RNIDFLPVENVPENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQG 418 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----------------EA 348 + ++ + A D LT L N ++ E Sbjct: 419 SIITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGH 478 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D ++++ G + ++ + L +++++ +++L G E ++L+ Sbjct: 479 KWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDL 538 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + + +R + L + + + + ++ L+ + Sbjct: 539 TDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMYAA 598 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEIL 523 E ++ +T ++++L N +R AL L++Y QP+ + + G + +L Sbjct: 599 KEE--NQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVDSTNQIVGMEALL 656 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPL 582 + G+++P +F+PL + L VL + +VNL Sbjct: 657 RWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVR 716 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + ++ I ++ + + P + LE+TE + E ++ ++ L G +IDDF Sbjct: 717 QFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDF 776 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID FV D TN D I+++I +A+ + VAE VE + Sbjct: 777 GTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAK 836 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +QQ L G +QGY GRP P Sbjct: 837 EQQDFLIHHGCHMMQGYYFGRPMPAE 862 Score = 63.8 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 12/199 (6%), Positives = 36/199 (18%), Gaps = 23/199 (11%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI--------- 198 P + + L S ++ F + + + Sbjct: 114 IPPAHKLLYIQKPFHPQEIHQLASALSSKWRTEHEFQKVFEDLERRIEDRTVELMNMNEH 173 Query: 199 ------LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVF 247 + + ++ L + + L + GY V Sbjct: 174 LIEELLEEIDERKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEEL 233 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVC 304 + + L ++ T + + I+ Sbjct: 234 LGQDVSMFVPPEHRKPLTLERIKEWKGLIRESVNIRKDGTTFLVWLMSEIVKNAKGEPFA 293 Query: 305 LLYMVRIYHRSEWLNRRWH 323 ++ + Sbjct: 294 IVTSCEDITERKQAEEALR 312 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 757 bits (1955), Expect = 0.0, Method: Composition-based stats. Identities = 127/759 (16%), Positives = 263/759 (34%), Gaps = 40/759 (5%) Query: 1 MFVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSI---- 55 + + + I+ + F + L + ++ L + S + + L + + Sbjct: 45 LLCAGAVSMGLGIWAMYFVAMLALHLPIAVEYDHLIVFFSIVLAVLSSALTLWIVSEQSM 104 Query: 56 ---LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRW 112 + G + + GM T + ++ + L + + + + T Sbjct: 105 SKTRVVKGSVVIGTGIAGMHYTGMAAMMMNAVILYDWLWFTVSIFVAILFSMVALILTFQ 164 Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + R + GL+ I Y F + L++ Sbjct: 165 LRSVDPVEGLWRKIFAGLLMGASITGMHYTGMYATTFVAHEHMTIAVI--PYDDSGLIAT 222 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 ++ +L L + V FA R ++R +L V+ + Sbjct: 223 MIGIVSVLILVVTLASVYVDKQFAGKTLRVLE-----SDQRYKSLFEHNYDGVIFYSIDG 277 Query: 233 -----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + + T+ + N + Sbjct: 278 TQSVMNPAAMRLTKEQSLPLEKLKTMCISTDAELISTHFTNAVQGDARNCDITLTTREGC 337 Query: 288 EYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + L + + +VR + + + A D LT LPN R +EQ + Sbjct: 338 QLHLNMTHTPVFVDQQITGVFMIVRDITNKKEYEAKINYLAFHDSLTGLPNRRFVEQQLD 397 Query: 346 Q--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 Q + L +D+ + ++ G ++ L + + +Y+L Sbjct: 398 QVIMEAQKTDQQVYVLFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGKKGTVYRLG 457 Query: 398 GSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +++L+ TE + M N + + + L + R+ + + L Sbjct: 458 GDEFMVILTDV-TEREVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVL 516 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 + + + + ++ + N + AL + + LL+ QP + Sbjct: 517 MRNADAAMYAAKDKGKN-SFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSA 575 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + ++ + G++ PD+F+ + + L VL + K Sbjct: 576 KSGAIVGVEALIRWDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGL 635 Query: 572 -GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R +VNL L+++ I + + ++P+ + LEITE + + +++L Sbjct: 636 KPLRVAVNLSARQFLKQDFTQMIAEILHQTRLAPEYLELEITESSMI-DVHRATQALKEL 694 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G +AIDDFGTGY++ LK + +KID FV+D++ + IV +I +A Sbjct: 695 KQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHL 754 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET+++ A L + + +QGYL RP P D Sbjct: 755 QMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRPLPSED 793 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 756 bits (1954), Expect = 0.0, Method: Composition-based stats. Identities = 116/566 (20%), Positives = 221/566 (39%), Gaps = 34/566 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I + R +E T +L T I GY Sbjct: 324 DITKRKQFESELRVSATAFETQEGILITDENNV-------MLRTNAAFTAITGYTNKEAI 376 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 + + + A++T + + Y + + + Sbjct: 377 GQNPRLLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTVTAVKDRNGMV 436 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCC 354 + ++ + + + A DPLT LPN R L +Q + Sbjct: 437 TNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLF 496 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-----PE 409 + +DN + ++ YG M ++ + + L+ +++ + + + G E +++L G + Sbjct: 497 IDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPLD 556 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + + F+ Q+++ L+ Q Q+ Sbjct: 557 AASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAK 616 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILA 524 L + + K+ L +R A++ L+ Q + + G + ++ Sbjct: 617 KEGRN-VLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVDESRHPFGAEALIR 675 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPL 582 + G+++PD+F+PL + +L VLE+ + G SVN+ Sbjct: 676 WFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAK 735 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + ++ L ++Y I+P + LE+TE N E ++ + L + G + ++DDF Sbjct: 736 QFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDF 795 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ + LKRL D +KID FV+DI + D IVR+I +A + L V+AE VET+ Sbjct: 796 GTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETE 855 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +QQ L G + QGYL G+P P+ Sbjct: 856 EQQKHLSSKGCKNFQGYLFGKPVPIE 881 Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 19/209 (9%), Positives = 37/209 (17%), Gaps = 24/209 (11%) Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 L L + L S D L + F Sbjct: 6 RLALRLALIYAAFGLLWISLSDRFLASVITDSASLTKFQTYKGFCYVVITSALVYFLA-- 63 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN-----DFIAG 241 E+R A V T + I G Sbjct: 64 -------KQTMKQNFLTEEKLHDSEERWKFALEGAGDGVWDWNPQTDEAFFSKRWNEIIG 116 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL------CLLNYNQNFLQGVETEYSLA--- 292 Y F + V L + +V + + + + Sbjct: 117 YTEHEFPATGSAWVAHLHPDDKDRVLSVIQGYLTDSREIYDVEYRIRCKDGSWKWILARG 176 Query: 293 -FILAVLISFSVCLLYMVRIYHRSEWLNR 320 + + + ++ + + Sbjct: 177 MLVSRDVYGKPLRMIGTHSDITQRKVDEE 205 Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 17/165 (10%), Positives = 41/165 (24%), Gaps = 14/165 (8%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--- 228 L +L+ ++ RMI + H + D L ++ L + + V ++ Sbjct: 173 LARGMLVSRDVYGKPLRMIGT-HSDITQRKVDEELVLKNLEKWKKLFDILPIGVSIVNSK 231 Query: 229 --LLCTPYENDFIAGYLVPVFFIIFTLGVGK--------LRYPFLNLTWAVSTLCLLNYN 278 ++ + I G F +L + + Sbjct: 232 NGIVDFNPSLEAILGISKEGLLQGDYDNWEYLRTDNTHMDADEFPSLRAIKEQRVVKDVV 291 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + + A L S + + + + Sbjct: 292 IGVKKESGDIIWTSVSAAPLSYDSNSCVTVTTDITKRKQFESELR 336 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 108/617 (17%), Positives = 217/617 (35%), Gaps = 30/617 (4%) Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + + + + + + I +VD + L I + Sbjct: 328 SSALWAFLVGLLLSVVSAIYVQLIVDRSRRIQLLVD-----DRTAQLRTVNDDLIADIAA 382 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII-- 250 A+ + +A L I GY Sbjct: 383 RKHAEHELQLRERAIEASANAIIIARAVAPDYPL---EYVNPAFTRITGYSPEEALGRNI 439 Query: 251 -FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 F G + L + + + +A + + + Sbjct: 440 GFLWGKDWEQPGIEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPVKDDTGEVSHFV 499 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRID 358 + ++ Q D LT L N L Q + + +D Sbjct: 500 VALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDLD 559 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 +F++ G +++I L +++ + + ++ G E +L+L G +V Sbjct: 560 RFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDAGLSTGIV 619 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + ++ + + + + T + L+ ++ Sbjct: 620 QRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRN-NFQ 678 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 ++ + +++ L +R A+++G+ +L+ QP + + G + ++ + G+ Sbjct: 679 FYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGM 738 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAG 591 + P +F+ L + L V+ + G R SVNL Q+++ Sbjct: 739 IPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLE 798 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I + + PQ + +E+TE ++ + ++ + +L G +++IDDFGTGY++ Sbjct: 799 SIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSY 858 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR D++KID FV DI T+ DA IV SI LA + L+V+AE VET++Q A L + Sbjct: 859 LKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQH 918 Query: 712 GVQYLQGYLIGRPQPLA 728 +QGY RP Sbjct: 919 DCDQIQGYFFSRPITAD 935 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 755 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 109/565 (19%), Positives = 206/565 (36%), Gaps = 27/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLV 244 + +A + S + A + +++ I G+ Sbjct: 260 VHELQYALKERDEALNLSQQNLRLADKVFEATLEGIIITDAEGIIETVNPAFTRITGWRR 319 Query: 245 PVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + + +L ++ + Y+ + + Sbjct: 320 EEVVGKNPRILSSSQQPPEFYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGP 379 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + R H A DPLT LPN L + Q Sbjct: 380 DGTFTHYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRV 439 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D +F++ G + ++++ L ++ ++ + +L G E +VL Sbjct: 440 ALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRD 499 Query: 411 EGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + L R + + + + + + T + L ++ Sbjct: 500 LRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKE 559 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 ++ T ++ L + + AL + + L+ QP + G + +L Sbjct: 560 RGKN-NFQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLR 618 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 ++ G ++P F+P+ + NL + VLE + +VNL Sbjct: 619 WRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQ 678 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + Q +I + R+ + ++ + LEITE A N + ++ L G RIAIDDFG Sbjct: 679 MTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFG 738 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+L D++KID FV D+ + DA I +I + ++ +L VAE VE ++ Sbjct: 739 TGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREE 798 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 + L G QY QGYL RP P A Sbjct: 799 HRQFLLDHGCQYGQGYLFSRPVPAA 823 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 95/565 (16%), Positives = 207/565 (36%), Gaps = 29/565 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 I + + +L I+GY V Sbjct: 898 GFITDISQHKKTEAQIELASKVFEQSREGIMITDSN------QKILMVNEAFSEISGYSV 951 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 R + N+ ++ + + ++ + Sbjct: 952 EETLGKTPRMLASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDT 1011 Query: 302 SVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 S + + + + + A DPLT L N L Sbjct: 1012 SGNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPL 1071 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D+ + ++ G + + + + +L ++++ + + + G E ++VL Sbjct: 1072 ALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPD-TG 1130 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E H+ + S Q++ L + + + + LL Q+ Sbjct: 1131 ENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKN 1190 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + +++ + + + +R AL LY QP + G + ++ Sbjct: 1191 DGRN-VYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIR 1249 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 + G ++P +F+P+ Q VL + ++ + K + +VNL + Sbjct: 1250 WNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQ 1309 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +++ +++++ + +SP+ + LE+TE A +N E+ + +++L G +++IDDFG Sbjct: 1310 FRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFG 1369 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR + +KID F++D+ ++ D I+ +I L+KA L +AE VETQ Sbjct: 1370 TGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQA 1429 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q L + +QG+ + Sbjct: 1430 QLDFLQEKQCDEIQGFYYSKALTPE 1454 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 11/153 (7%), Positives = 31/153 (20%), Gaps = 18/153 (11%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFF 248 + ++ + + L V L + G Sbjct: 460 VQDVTELKHLAELNIEHQNQLNALVHTIPDLVWLKDTEGLYLACNPSFERFFGAKEADII 519 Query: 249 II---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV----LISF 301 + + N A++ + + L + Sbjct: 520 GKTDYDFVDKALADFFRENDCNAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQ 579 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + ++ + R + + + LT L Sbjct: 580 VIGVVGVARDISKRKEDEAQLER------LTKL 606 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 11/164 (6%), Positives = 35/164 (21%), Gaps = 8/164 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 ++++ L + S A ++ G + + + Sbjct: 754 LLLEMAIDIGFALNDFYHAKERKIIEASRQEALDRLQKIADRLPGVIYQFRLMPDGTSSF 813 Query: 225 VLLLLLCT---PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + + + VF +I V ++ + L Sbjct: 814 PFASDALYEIYRVKPEDVTEDSSKVFEVIHPEDVDDVQKSIEE---SAEHLTPWYQEYRV 870 Query: 282 LQGVETEYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRWH 323 + L+ +L + + + + Sbjct: 871 RFKNDDVRWLSGNAMPEKQPDGSILWHGFITDISQHKKTEAQIE 914 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 753 bits (1945), Expect = 0.0, Method: Composition-based stats. Identities = 109/588 (18%), Positives = 208/588 (35%), Gaps = 28/588 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 + + + + + + + I + + + Sbjct: 309 SRIWISENAHVVFGPQGEFICYEGTVQDISERKRTEAHLQLMAMVFSNSNEAIIVTDASN 368 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 ++ T + GY F ++ + Sbjct: 369 R------IIATNPAFTCLTGYQPDDVIGKNPRILSAGTTPTEVFSDMWTCLHREGAWQGE 422 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + Y ++++ + + + R A D LT L Sbjct: 423 LWDRKKNGEAYPKWLSISLVRDEDGQIRNHIGSFIDISELKATQERIRHLAHHDTLTNLA 482 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N +L + + + +D + ++ G + + + L + Sbjct: 483 NRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAV 542 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 +E++ + +L G E ++ L G + H+ + + S L + Sbjct: 543 RESDIVARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVY 602 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 G+ + LL + A+ E ++ TT+++ L + +R A+ + + Sbjct: 603 PGDGSEIGDLLKNADVAMYHAKANGRG-NYQFFTEDMNIATTERMCLESDLRLAITRREF 661 Query: 505 LLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LL+ QP + G + ++ G+++P F+P+ + + A VLE + Sbjct: 662 LLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACR 721 Query: 562 WLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L R S+NL L K + RI L +S + LE+TE + ++ Sbjct: 722 QLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASP 781 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + S+ ++ L G ++IDDFGTGY++ LK L +KID FVKDI ++ DA I Sbjct: 782 DESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADIC 841 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA L VVAE VET+ Q L +G + +QGYLI +P P Sbjct: 842 DVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPAD 889 Score = 74.2 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 16/151 (10%), Positives = 37/151 (24%), Gaps = 13/151 (8%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYL 243 +I + R + E+R + A+ + L + GY Sbjct: 201 VIEGFIEDISVRRTTLEALEAAEQRYRNIFEHASEGIFQSTRDGHYLAANPALAKLYGYD 260 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWA-----VSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + Y N +LN+ + + ++ V+ Sbjct: 261 NAQALMTDLADIERRLYVQPNRREEFLTLIEKNGAILNFESEVYRRDGSRIWISENAHVV 320 Query: 299 ISFSVCLL---YMVRIYHRSEWLNRRWHLQA 326 + V+ + L A Sbjct: 321 FGPQGEFICYEGTVQDISERKRTEAHLQLMA 351 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 752 bits (1942), Expect = 0.0, Method: Composition-based stats. Identities = 117/637 (18%), Positives = 229/637 (35%), Gaps = 31/637 (4%) Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + R++++ ++ +++ +S +AI L +L Sbjct: 269 APLKTNRIYFITVMAVGTSVTLLFVWFLMQRLTSPLSLITRHVEAIPDKSGLHNLINLER 328 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCT 232 L +I + + + + E L+ A + + L Sbjct: 329 K-----DELGTLINAFNSMILSLDQHQNALRESESNFRALADNANDGLQIITDSSHLAYV 383 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRY----PFLNLTWAVSTLCLLNYNQNFLQGVETE 288 I GY V + + + + + Sbjct: 384 NKRAAEIVGYSVEEMLLTTIETIIHPDHLQMIIERKAKTDAGEFVPKQFEIMLAHRNGSC 443 Query: 289 YSLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 + A I + L +VR + A D LT LPN L+ Sbjct: 444 VPVEVTTARTIWQGKQVELAIVRDITDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQG 503 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D + ++ G + + ++ L ++E + + ++ G Sbjct: 504 IVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLTECVRETDTVARIGGD 563 Query: 400 ELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++++S E L + + S+ + N+ + + + + +Q LL Sbjct: 564 EFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLK 623 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 ++ A ++ Q + ++L N++R AL++ + +++ QP + Sbjct: 624 NADLAMYKAKDQGKN-AFQYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQMDLKS 682 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 G + ++ D G++ P +F+P+ + L L++ Sbjct: 683 GRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMP 742 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VNL + QK I + K+ ++P + LE+TE S AE S + +L + Sbjct: 743 LRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKE 802 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +AIDDFGTGY++ LK + +KID F++D+ N D IV +I +A +L Sbjct: 803 MGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNL 862 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V AE VE Q L +QGYL+ P P A+ Sbjct: 863 KVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAE 899 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 749 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 117/698 (16%), Positives = 239/698 (34%), Gaps = 51/698 (7%) Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY 141 + ++ V LR + RL +V + Sbjct: 251 AASTRMSAFLAEVGTVEPMLERLRAHSDQTAVATRNTVQRLTRLTGWTIVATSLLAILAG 310 Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL-------------TR 188 + +FF + G D + + F L R Sbjct: 311 SMVAFFTSRSITRSVKGCMDFAGRLAGGDLAVRMEAGGDNEFGRLATALNCMADELQGHR 370 Query: 189 MIVSPHFAQ-----ILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL--------LLCT 232 ++ A+ +IA E+ ++ +++ ++ Sbjct: 371 LLQEERTAELAGANSALETEIAEHRDAEEALRQRQRAIDSSSNGIMITDALELDHPIIYV 430 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + I GY + + + A+ L + + + + Sbjct: 431 NPAFERITGYAASEVLGRNPRLLCSGDREQLGLEVIRVALCELREGHAELRNYRKDGSLF 490 Query: 290 SLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 A ++ ++ + +V + + Q+ D LT LPN L Sbjct: 491 WNALSVSPVLNAAGEVTNYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQ 550 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + + +D+ +F++ G M ++ R L ++ + + + G Sbjct: 551 ALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSECVRSIDTVARHGG 610 Query: 399 SELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++VLS + + R L + + + Q LL Sbjct: 611 DEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKDGSDAQVLL 670 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 ++ ++ ++ + +R AL++ + L++ QP + Sbjct: 671 KNADVAMYRAKQCGRN-NFQFYTGDLNDIVLARLTMEKYLRRALERDEFLVHYQPKVDLL 729 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-K 571 G + ++ + G ++P F+PL + L VL + D Sbjct: 730 SGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLP 789 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL P Q+++A + R+ + ++P+ + LE+ E + + ++ ++ L Sbjct: 790 PMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALK 849 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G ++ +DDFGTGY++ LKR D++KID FV+DI + A IVR++ LA + Sbjct: 850 ELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLN 909 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE +ET+ Q L L +QG+ RP P A+ Sbjct: 910 LRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAE 947 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 102/591 (17%), Positives = 211/591 (35%), Gaps = 30/591 (5%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 D V + + + + L I ++ ++ ++ Sbjct: 647 DGSIVWVRDIIRIESDAENKLCLHGLLIDITDSKQSESQLKKLSRAIEQSPV---SVVIT 703 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 + + + GY + L + +L +++ Sbjct: 704 DPEG---RIEYVNPKFTQLTGYTLEEVIAQNPRILKSGNLLPSVYDSLWKTITSGKEWYG 760 Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + + + + ++ L S + + + + +R A D LT L Sbjct: 761 ELENKRKDGSIFWESASISPLFDESGKIINFIGVKEDITQRKLNEKRLEYMATHDGLTGL 820 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N L + + L +D + ++ G ++ ++++ + L Sbjct: 821 ANRTLLYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQY 880 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 ++ + + +L G E +++L+ + + L + L + Sbjct: 881 VRSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICL 940 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + LL ++ A L ++ K + + N++R AL++ + Sbjct: 941 SETDNVDGTILLRNADIAMYKAKAEGCGLY--FYSHEMNEHLIKTLEMENSLRQALEKNE 998 Query: 504 LLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LY QP G + +L G++ P +F+PL + L + VL Sbjct: 999 FQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEAC 1058 Query: 561 KWLATHPCDK-KGPRFSVNLMPLTLLQ-KNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + +VN+ Q +N+ + +R + P + LE+TE Sbjct: 1059 RQSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMK 1118 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 +A ++ + ++ + G +++DDFGTGY++ L+ D +KID F+ DI ++ A Sbjct: 1119 DAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAA 1178 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I+ SI +A L VAE VE Q AL+ G Y+QGYL RP P D Sbjct: 1179 ILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPED 1229 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 14/147 (9%), Positives = 31/147 (21%), Gaps = 5/147 (3%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 I Q +++ + + + LS P Sbjct: 545 FLEDITEQLETQQTLQKNKKNIQQLAENTEAVLYEYNLSDNKWTYMAPQVERIFGYKPED 604 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN---YNQNFLQGVETEYSLAFILAVLISFS 302 F L +S L F + + + I+ + Sbjct: 605 WIDNQFWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVWVRDIIRIESDAE 664 Query: 303 V--CLLYMVRIYHRSEWLNRRWHLQAL 327 CL ++ S+ + + Sbjct: 665 NKLCLHGLLIDITDSKQSESQLKKLSR 691 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 114/568 (20%), Positives = 194/568 (34%), Gaps = 28/568 (4%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 F ++ I + R G + A +L + G Sbjct: 264 YFIHIVEDITERKNFEDNLRLSATVFEGSTEAIIITDARAN------ILRVNSAFTAMTG 317 Query: 242 YLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + + +S+ + + L + Sbjct: 318 YADHEVVGKNPRLLKSGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAV 377 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + R + R QA D LT LPN Sbjct: 378 RNSEDKITNYVGISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDR 437 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + ++ + + LL +E++ L + G E +++L Sbjct: 438 HEFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLES 497 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + + E +Q LL + Sbjct: 498 IRGAEDAAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYR 557 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + E +S +++ L +R AL + + +L+ QP N G + Sbjct: 558 AKDSGKND-YQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEA 616 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ D G++ P F+PL + VL + PR SVNL Sbjct: 617 LIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLS 676 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + N+ + R+ K +SP + LEITE N E ++ ++ L + G +AID Sbjct: 677 THQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAID 736 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR +KID FV+ I +N D I SI L K +L VVAE VE Sbjct: 737 DFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVE 796 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 TQ+Q +L QGYL +P Sbjct: 797 TQEQLTVLRNYQCDEAQGYLFSQPVDAD 824 Score = 68.5 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 14/202 (6%), Positives = 39/202 (19%), Gaps = 16/202 (7%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 + ++ VD ++ + M + + Sbjct: 90 STRHIPVIIVTGGALRHNEAVQKSFAAGAVDFVTKPINEVELFMRIHSALALYRERV--- 146 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFII-- 250 + E++ A + + LL + G+ Sbjct: 147 -IRHHKTRELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQERELIESSF 205 Query: 251 -FTLGVGKLRYPFLNLTWAVSTLCLLNY-NQNFLQGVETEYSLAFILAVLISFSV---CL 305 L +V + + L+ + + Sbjct: 206 PDLCVPENRDVHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTLSPMKDAAGVPKYF 265 Query: 306 LYMVRIYHRSEWLNRRWHLQAL 327 +++V + L A Sbjct: 266 IHIVEDITERKNFEDNLRLSAT 287 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 96/549 (17%), Positives = 193/549 (35%), Gaps = 27/549 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFF---IIFTLG 254 + + A + A +++ L I GY Sbjct: 554 ASKAAEADLRLARQVFDNTAEGIVITDPAFRVLEVNQAYQQITGYDKEEIIGKLPSVMQA 613 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRI 311 + + + + Y ++ + + + Sbjct: 614 GLHEAAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWLSISQVADAKGSVQNYVAVFTD 673 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFM 363 + + R A D LT LPN L++ +Q + + +D + + Sbjct: 674 ITQRKLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKII 733 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + G ++ + L ++E + + + G E ++++ L + + Sbjct: 734 NDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMA 793 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 ++ L + + + LL ++ Sbjct: 794 TLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESGKN-TFRFYAAE 852 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 + + + + L N +R A+++ + +L+ QP + G + ++ + G+++P + Sbjct: 853 ANTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQ 912 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L ++ + + R +VNL + + I Sbjct: 913 FIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADA 972 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++P + LEITE NAE + ++ H G + IDDFGTGY+++ LK Sbjct: 973 LTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFP 1032 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV+DI + D I ++I +A + + VVAE VETQ+Q A L K G + Sbjct: 1033 IDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQI 1092 Query: 717 QGYLIGRPQ 725 QG+L P Sbjct: 1093 QGFLFSEPL 1101 Score = 71.1 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 26/322 (8%), Positives = 75/322 (23%), Gaps = 28/322 (8%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILF------IFGWRGVVPVLCGMFC 73 LT+V + A+I+ + + + + F + P + Sbjct: 121 LTLVFFAVGISPLVSALINVLMLVVVGADTTALANSFTNSWLEDAFSYLLFTPAVLAF-- 178 Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGT----RWRYGLTSRYVWQRLFWLG 129 + + V ++ +L + ++ + W Sbjct: 179 --YHYEPIRWSWARVGEALILAGLVVFSCLLTMLGAMDKSMSQLMQPQAFMLFPLIMWAA 236 Query: 130 LVT--PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 L +++ + F A ++D L+ + L+ Sbjct: 237 LRFHQRGAALSVLFVAMTALWGGAHGLGTFAHDFAQSNLLDYWMYV---LVLSSTGVALS 293 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV--- 244 + ++ + + ++ A+ ++ I GY Sbjct: 294 GLNAGRIRSEARLKEQLDTYDALLHAQADVNEGVAIIHRGKIVYGNDALWRIGGYSPGDI 353 Query: 245 ----PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 F +I ++ + + Y L + A Sbjct: 354 PLGSDFFSLIHPSDRKRVSEIYQQRLQDMDVPT--RYEALGLGKNGRAIHIEIAAAQYRD 411 Query: 301 FSVCLLYMVRIYHRSEWLNRRW 322 S ++ ++ + Sbjct: 412 DSQRIVTLIIDISSRKKAEAEL 433 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/371 (9%), Positives = 90/371 (24%), Gaps = 51/371 (13%) Query: 2 FVEHNLIKNIKIFTLAFTLT-----VVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL 56 + L+ ++ + + PL + + L V+ Sbjct: 195 LILAGLVV-FSCLLTMLGAMDKSMSQLMQPQAFMLFPLIMWAALRFHQRGAALSVLFVA- 252 Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCAC--------------- 101 W G + N ++ V+ + + Sbjct: 253 MTALWGGAHGLGTFAHDFAQSNLLDYWMYVLVLSSTGVALSGLNAGRIRSEARLKEQLDT 312 Query: 102 --AILRWQLGTRWRYGLTSR--------YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 A+L Q + R +W+ + P+G + S Sbjct: 313 YDALLHAQADVNEGVAIIHRGKIVYGNDALWRIGGYSPGDIPLGSDFFSLIHPSDRKRVS 372 Query: 152 KISTFFGDADAIFTVVDLLSL-----FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 +I + T + L L + I + ++ IV+ ++ A Sbjct: 373 EIYQQRLQDMDVPTRYEALGLGKNGRAIHIEIAAAQYRDDSQRIVTLIIDISSRKKAEAE 432 Query: 207 SLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPV-----FFIIFTLGVG 256 + ++ L V + E + + GY + F + + Sbjct: 433 LVKSQQDYRELVESVQAIVWRAIPGGKFTFVSKEAEALLGYPLAQWTTDPGFWVDKIHPD 492 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRIY 312 + L +++ + + I+ V+ + L+ ++ Sbjct: 493 DRDWVVEYCRTESLKLQSFDFDYRMIAADGRVVWMKDIVKVIPNMSNTRPAELVGVMLDI 552 Query: 313 HRSEWLNRRWH 323 S+ Sbjct: 553 TASKAAEADLR 563 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 744 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 95/450 (21%), Positives = 180/450 (40%), Gaps = 16/450 (3%) Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 ++ + + + + + A D LT LPN Sbjct: 485 ASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRN 544 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + L +D+ + ++ G + ++ I + L+++ + + ++ G E ++L Sbjct: 545 KNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLH 604 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + N + + + + LL Sbjct: 605 NITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADAAMY 664 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 Q+ ++ QT ++ L N +R ALD+ + ++Y QP + G + Sbjct: 665 QAKEMGRN-NYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVE 723 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNL 579 ++ G+++P +F+P+ + L +L R +VNL Sbjct: 724 ALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNL 783 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 LQ ++ I + + + PQ + LEITE A + + + +L K G +AI Sbjct: 784 SARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAI 843 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL DI+KID F+ D+ T + D I+ +I L + VVAE V Sbjct: 844 DDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGV 903 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET++Q L + +QGYL +P P+ + Sbjct: 904 ETKEQLMFLRQQQCDLMQGYLFTKPLPVRE 933 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 744 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 123/680 (18%), Positives = 223/680 (32%), Gaps = 31/680 (4%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 + + + + L + + R + + Sbjct: 178 IHGSLIMGRFLGTDEIRRLADLNHLNLSILPLNAARQSSKSATILPPLSATRPIAVIPGS 237 Query: 133 PIGIKCSMYL--------VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 I + + + D KI + DA F L + L +L+ Sbjct: 238 GETITGYGLINDIHGKPALIARVDMRRKIYSQGVDAVQYFLFCFLGFCLISSLTGYILYA 297 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 L + +R I+ + S + L Y D + Sbjct: 298 KLLASRKERKDTEKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTL 357 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 GV + +S + + ++ Sbjct: 358 YDIMEDDRSGVDW------RINRILSEKVCFLGEHTVRAEDGSMVEVDLNANLVSYGEQQ 411 Query: 305 LLYMV-RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCL 355 ++ MV R + A D LT LPN Q + L Sbjct: 412 VICMVLRDISERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYL 471 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G ++ + L ++++ + + +L G E +++ T Sbjct: 472 DLDRFKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSL 531 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + + + + +T + LL + Sbjct: 532 LVAEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRN- 590 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 E ++ + ++++ + +R AL + + LL+ QP N G + ++ + Sbjct: 591 TYQFFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQ 650 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G++ PD F+PL + L VL + R SVN+ N Sbjct: 651 KGLILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDN 710 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + + + P + LEITE N E ++ + +L + G IAIDDFGTGY++ Sbjct: 711 LPDTIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSS 770 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL ADI+KID FV I N D +V +I +L L +VAE VE Q+Q L Sbjct: 771 LSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFL 830 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 + Q +QGY +P P Sbjct: 831 EERNCQEVQGYYFSKPLPAE 850 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 743 bits (1920), Expect = 0.0, Method: Composition-based stats. Identities = 102/570 (17%), Positives = 204/570 (35%), Gaps = 28/570 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAG 241 R ++ I W R I ++ + +++++ + G Sbjct: 120 LRAVIGQCMTSIKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTG 179 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + L +S + + Y + ++ + Sbjct: 180 YTSAETIGKKPHILKSGETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPI 239 Query: 299 IS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + A D LT LPN + Sbjct: 240 TNGNEQITHFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHN 299 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLS 406 + L +D + ++ G + +++ L + + + + + G E +++L Sbjct: 300 RLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLP 359 Query: 407 GPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + + L + F + + L+ Sbjct: 360 DIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDGRDTETLIKNADMAMY 419 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 ++ + Q +++ + N++R AL + + LY QP N + + Sbjct: 420 RAKEQGRSR-YHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLE 478 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNL 579 ++ + G++ P++F+PL L VL + T R +VN Sbjct: 479 ALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNF 538 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P Q + + ++ ++P + LE+TE N E ++ + +L G I+I Sbjct: 539 SPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISI 598 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ +K+L +KID FV DI TN DA I ++ +A++ L+V+AE V Sbjct: 599 DDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGV 658 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET +Q LL L +QGYL +P P+A+ Sbjct: 659 ETLEQMKLLDGLNCPEMQGYLFSKPLPVAE 688 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 101/604 (16%), Positives = 204/604 (33%), Gaps = 31/604 (5%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 + V ++L L ++ + L R I + R A Sbjct: 793 RIGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVILHTLWRDISERRVTETRLRLLAAAF 852 Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLN 264 + + + +L + GY + Sbjct: 853 EHSAE---AIMVSDRDN---RILEVNDAFCRLTGYAADEVRGSDPRLLSSGRTSAEEYRT 906 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRR 321 + A+++ + + Y ++ + + + + Sbjct: 907 MWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKAAEEK 966 Query: 322 WHLQALTDPLTLLPNFRALEQAPE----------QEAGKSFCCLRIDNLEFMSRHYGLMM 371 A D LT LPN L+ + + L +D + ++ G + Sbjct: 967 ISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHV 1026 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 + + L +++++ + +L G E ++VL+G + + + + SR Sbjct: 1027 GDALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADAL-AAERVAGKILKALSRAYQI 1085 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 L F + E+++ L+ + + + ++ + + Sbjct: 1086 EGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGRN-NVQFFTASMNEAASDR 1144 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 L + AL Q +L+ QP + + +L G++ P +F+PL Sbjct: 1145 RQLEEDLHLALQQKQFVLHYQPQVDAQRRVFAVEALLRWQHPHHGLVPPARFVPLAEDTG 1204 Query: 547 LSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VLE+ + + + +VN+ Q + + + +P Sbjct: 1205 LIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANP 1264 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE N ++ + + G ++DDFGTGY++ L RL D +KID Sbjct: 1265 ARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDR 1324 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV + N DA+I ++I + ++ L VVAE VET+ Q+ L G QG+L RP Sbjct: 1325 AFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRP 1384 Query: 725 QPLA 728 + Sbjct: 1385 LAVD 1388 Score = 73.8 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 9/163 (5%), Positives = 33/163 (20%), Gaps = 29/163 (17%) Query: 214 AFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNL 265 + +++++ + + GY + +L Sbjct: 597 LLQAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDTYRSL 656 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRW 322 + + + + + +A + L + ++ Sbjct: 657 WQTLLEGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADKLL 716 Query: 323 H--LQALTDPLTLLPNFRALEQAPEQEAGKSFC----CLRIDN 359 +A R E A + + + Sbjct: 717 QESEEAF---------RRLFEDA---KDPLLLLKDGSFIDCNR 747 Score = 64.2 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 30/149 (20%), Gaps = 14/149 (9%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-------------LLCTPYENDF 238 + R E+ L A +LLL L Sbjct: 701 AVKEDVTERLRADKLLQESEEAFRRLFEDAKDPLLLLKDGSFIDCNRATLELLGYGSKAQ 760 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + G L A + + + + + L + Sbjct: 761 LLGRDAADISPARQPDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTPI 820 Query: 299 ISFSVCLLYMV-RIYHRSEWLNRRWHLQA 326 +L+ + R R L A Sbjct: 821 TLRGEVILHTLWRDISERRVTETRLRLLA 849 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 12/178 (6%), Positives = 38/178 (21%), Gaps = 10/178 (5%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 L + + + ++ + L +I + + Sbjct: 407 HAVLPMLLPAGQWTGEIELRSLSGRTTPAIHTLFVVHNTADEPPVIATVLADISERKEME 466 Query: 205 APSLGKEKRAFTLSWLAALSVL----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + TL A + ++ ++ + I GY + Sbjct: 467 ERNRQLLAEMETLLGNALVGIVHLRQRCVVSCNRRLEEIFGYAPGELIGKSSQVFYPSIE 526 Query: 261 PFL----NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL--LYMVRIY 312 F V+ + + + + A + +++ Sbjct: 527 VFEKIGARAYAVVAENRNFSGELTLRRKDGSLFWGALTGRAIDPSQPHAGSIWVFADI 584 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 14/194 (7%), Positives = 38/194 (19%), Gaps = 14/194 (7%) Query: 146 FFDFPLKISTFFGDADAIFTVV--DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 +F + VV L + + + + + R Sbjct: 279 YFIIGISHDDALAGWRTRALVVGFSGCLLLALLAGLLLQIWRSEQREAKVVADLVERDRQ 338 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKL 258 + + + + L+ A + + L + ++ Sbjct: 339 LRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRRMIDMPQGAACSDYSFKQFYS 398 Query: 259 RYPFLNLTWA----VSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRI 311 R L A + L V+ + ++ Sbjct: 399 REEANRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIHTLFVVHNTADEPPVIATVLAD 458 Query: 312 YHRSEWLNRRWHLQ 325 + + R Sbjct: 459 ISERKEMEERNRQL 472 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats. Identities = 112/568 (19%), Positives = 209/568 (36%), Gaps = 28/568 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY 242 R ++ + + ++A T+ V++ +L I+GY Sbjct: 489 RELIDECACIAGLAVTRVRADTRLRQAATVFESTREGVIITDLEGRILDVNRAFTEISGY 548 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 P + + + ++ T + Y + + Sbjct: 549 SEPEVLGRNPSLLRSNRQDHAFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVA 608 Query: 300 SFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + ++ + + R DPLT LPN R ++ Q Sbjct: 609 DSQGRPSHYVGVMTDISQLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGG 668 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G + + R L ++E++ L +L G E L++L Sbjct: 669 RVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENL 728 Query: 409 ETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + L S + H N L +G + + T+ L+ Q Sbjct: 729 QRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQ 788 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + ++ +++ L + AL + +L+ Q + G + Sbjct: 789 AKEEGRN-TYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEA 847 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 ++ G++ PD+F+PL + L VL + +VNL Sbjct: 848 LVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLS 907 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L ++ R+ R+ + + + + LE+TE E ++ + L G R++ID Sbjct: 908 GRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSID 967 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKRL D +KID FV+DI ++ D I +I +A+ L+V+AE VE Sbjct: 968 DFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVE 1027 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T +Q L + G QGYL GRP P Sbjct: 1028 TPEQCDFLIRQGCTAGQGYLFGRPLPAE 1055 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats. Identities = 105/620 (16%), Positives = 215/620 (34%), Gaps = 24/620 (3%) Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + + + + + T + L + Sbjct: 279 GILSVFFATLISAGGVIIIFRYLTQRSLNTVLQMTEAAFRNTEPARYKPTLVSEFNILGH 338 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-LLLLCTPYENDFIAGYLVPVFF-- 248 S + L ++ L ++ + ++GY + Sbjct: 339 SIVDLDHQRKESEKQLLLSSSVFDNAVEGIVITNLDGIIEQVNPACEAMSGYRLKELIGE 398 Query: 249 -IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---C 304 + + ++ + Y L ++ + + Sbjct: 399 NPRIFRSDHHNSAFYQQMWQSLIEEGRWEGEVWNRRKNGEVYPLNVSISRCTNSAGIPSH 458 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 + + + + QA D LT LPN + + + + L Sbjct: 459 YVAIFHDISEIKRSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLD 518 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 IDN ++++ G ++ I LL ++ + +L G E ++++ E + Sbjct: 519 IDNFKYINDSLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITV 578 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + + F + +T + L+ ++ Sbjct: 579 LCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEAGKN-G 637 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDG 530 + +++ L + AL + + +L+ QP + E G + ++ K DG Sbjct: 638 YQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEALIRWQKPDG 697 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL-LQKN 588 ++ PD+F+P+ + L + D VL++ + + + SVNL + Sbjct: 698 QLVYPDEFIPIAEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFAKDQE 757 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + R+ + + + + + LE+TE S+ ES++ + QL G IAIDDFGTGY++ Sbjct: 758 LVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGTGYSS 817 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 +K A +KID FVKDI ++ D I SI L + ++ V+AE VE Q Q L Sbjct: 818 LSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEEQTQIDFL 877 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 + Q +QGY G+P Sbjct: 878 KQHRCQQVQGYFYGKPCAAE 897 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 739 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 108/587 (18%), Positives = 202/587 (34%), Gaps = 28/587 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 I+ + + T + M R I S + + Sbjct: 919 IWILDRGKVVETDAHMQPMRMTGTNRNITSRKLIENELVLSSQVLNSMNEAVVVA----- 973 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG--KLRYPFLNLTWAVSTLCLLNYNQN 280 + + I GY + + + + R F ++ + Sbjct: 974 -GLDYKIRSVNPAFSAITGYSERQITDKYLVHLAYKQQRELFNSIEQQLLRHKHWVGEIW 1032 Query: 281 FLQGVETEYSLAFILA---VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + + + + + + + + A D LT LPN Sbjct: 1033 IRNKQRKAILVWLEINQVIDIKGETSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNR 1092 Query: 338 RALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 + + L +D + ++ G + +++ + L ++E Sbjct: 1093 TLFQDRLNHAITQAHRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVRE 1152 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDG 446 + + +L G E ++L G + + + L + + Sbjct: 1153 GDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPN 1212 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + L+ + + ++ T+ VLL ++ A+ + +L L Sbjct: 1213 DADNADSLIKFADTAMYHAKSLGRN-NFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSL 1271 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 QP + G + +L + G ++P +F+PL + + + V+ + L Sbjct: 1272 VYQPKFSLRDGSLTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQL 1331 Query: 564 ATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 A +VNL L +I I + Q++ LE+TE N + Sbjct: 1332 AEWNALGFNNISMAVNLSARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQD 1390 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 S+ + +L G IAIDDFGTGY++ LKR D +KID FV+DI + DA I + Sbjct: 1391 SVSILSKLKALGLTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSA 1450 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I LA + L+VVAE VETQ Q L G +QG+L+ +P D Sbjct: 1451 IIALAHSLELNVVAEGVETQAQLNFLGLQGCDEVQGFLLSKPLSAKD 1497 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 6/139 (4%), Positives = 26/139 (18%), Gaps = 9/139 (6%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYE--NDFIAGYLVPVF 247 + R E+R W + + + + ++ + Sbjct: 818 RKQKRQQQREFETSIRASEERLKLALWASGDGMWDWNIKENKVYRTNMDASVSHWSSHNL 877 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----FSV 303 + ++ + + V+ + + Sbjct: 878 LHENMHPEDREKFKYELAEHLQGRTPFFEIEYRIEGAFGKWIWILDRGKVVETDAHMQPM 937 Query: 304 CLLYMVRIYHRSEWLNRRW 322 + R + + Sbjct: 938 RMTGTNRNITSRKLIENEL 956 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 739 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 107/582 (18%), Positives = 207/582 (35%), Gaps = 33/582 (5%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 V + + F + I ++ R A + + + + + Sbjct: 245 IRGVPLASGGFLSIYTDITDRKQSEEQLRIAAAAFESQ------TCMIITDANRV-IQRV 297 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 GY + + + + Y Sbjct: 298 NRAFIETTGYSAEEAVGQTPRLLQSGRHGADFYREMWETIHRTGAWQGEIWGRRKNGEVY 357 Query: 290 SLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 ++ + + + R + A D LT LPN L Sbjct: 358 PKWLSISAVVGTNGRVSHYIGTHNDITERKKAEERINALAFFDQLTGLPNRTLLLDRLKQ 417 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 ++ + + +DN + ++ G + ++ + L +++ + + +L G Sbjct: 418 TILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTVARLGG 477 Query: 399 SELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQET 450 E ++VL+ E + + + + + + F G Sbjct: 478 DEFVVVLANLNTNDKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIP 537 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + L+ Q ++ A A+ + + + + + + AL + LL+ Q Sbjct: 538 IDDLMKQADLSMYKAKAAGRN-AVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQA 596 Query: 511 IRNK-EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--P 567 G + +L G+++P +F+PL + L VLE+ LA Sbjct: 597 QMVGERLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGR 656 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + +VN+ Q + +++ + ++ +PQ + LE+TE N E + + Sbjct: 657 PEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKM 716 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L G ++DDFGTGY++ LKRL D +KID FV+D++T++ DA I R+I LA Sbjct: 717 AALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALA 776 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L V+AE VET+ Q+ L G QGY RP P+ D Sbjct: 777 NSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIED 818 Score = 63.1 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 33/147 (22%), Gaps = 17/147 (11%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--------------LCTPYENDFI 239 + L R E R + ++L+ L + + Sbjct: 3 QRYRRLVIRLEQALRTSEARLHSFFDATPDALLISDAHGTITMANQQVEKLLGYVAAELV 62 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + + F LR F A + + +E + L+ + Sbjct: 63 GKSIEDLVPNRFKASHPVLRSEFTASPRARRMGNGMA--VKARRKDGSECDVDVSLSRIE 120 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + +R + Q Sbjct: 121 TDEGMFFASALRDISERKRKEEELRRQ 147 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 15/171 (8%), Positives = 31/171 (18%), Gaps = 28/171 (16%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 +SL M F R I + RR T+ + L Sbjct: 114 VSLSRIETDEGMFFASALRDISERKRKEEELRRQ-------NGVLSTIFQSFPGGITLFD 166 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-------- 281 + + + A + Q Sbjct: 167 ADLRLVAFNDQFKALLDLPDVLFEQPEPDFETLIRYNAARGEYGPGDPEQQVAAIIARTK 226 Query: 282 ---------LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 ++ T + + + S L + + + Sbjct: 227 KFVPHKIERVRPDGT----SLSIRGVPLASGGFLSIYTDITDRKQSEEQLR 273 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 739 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 99/568 (17%), Positives = 199/568 (35%), Gaps = 27/568 (4%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 F R I ++ R + A + + + G Sbjct: 347 FFSVAARDISKRKQSEEKLRHLSQAVEQSPA---DVVITNAEGI---IQYVNPRFSQVTG 400 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + +L +S + + + I++ + Sbjct: 401 YASKEVIGKKPSILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPI 460 Query: 299 ISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + R QA D LT LPN Sbjct: 461 RDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYN 520 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D+ + ++ G ++ L+ ++E + + +L G E +L+L Sbjct: 521 RKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPD 580 Query: 408 PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + + F ++ L+ + Sbjct: 581 LTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYR 640 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 S ++ + + + + + +R A+++ ++ ++ QP+ + G + Sbjct: 641 SKREGKG-VFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEA 699 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 +L G ++P++F+PL + L VL + + A+ +VN+ Sbjct: 700 LLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISG 759 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 ++ + + + P + LE+TE + + ++ I++L G AIDD Sbjct: 760 KQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDD 819 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG+++ L+R D +KID F+KD+ N DA +V+SI +A + SL VV E VET Sbjct: 820 FGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVET 879 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ L G QG+L RP P D Sbjct: 880 HGQREFLRLSGCHIAQGWLYSRPIPGKD 907 Score = 64.2 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 18/251 (7%), Positives = 50/251 (19%), Gaps = 7/251 (2%) Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY 141 F + + V + + T + R + + Sbjct: 118 RFRRLVELAPDAILVHQGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPACHDLVAKR 177 Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 L L + V ++ + + R I + A+ + Sbjct: 178 LKLLARGEQLPLVEMRLVRLDGGQVEVESTMGMTTYGGHRAMQSVWRDISARKQAEAASQ 237 Query: 202 RDIAPSLGKEKRA-FTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGV 255 L + L ++ + D I G + + Sbjct: 238 AAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLSRLIPERYHAI 297 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM-VRIYHR 314 + + L+ E+ + + + + R + Sbjct: 298 NAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGRNFFSVAARDISK 357 Query: 315 SEWLNRRWHLQ 325 + + Sbjct: 358 RKQSEEKLRHL 368 Score = 58.1 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 12/135 (8%), Positives = 31/135 (22%), Gaps = 9/135 (6%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFII 250 R E+R L LA ++L+ ++ + + G P I Sbjct: 100 TDISERRNAEVRLRESEERFRRLVELAPDAILVHQGGTIVYANRQAQIMMGAPTPTDLIG 159 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLN----YNQNFLQGVETEYSLAFI-LAVLISFSVCL 305 ++ + + L ++ + + + Sbjct: 160 RSIIEIIDPACHDLVAKRLKLLARGEQLPLVEMRLVRLDGGQVEVESTMGMTTYGGHRAM 219 Query: 306 LYMVRIYHRSEWLNR 320 + R + Sbjct: 220 QSVWRDISARKQAEA 234 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 119/764 (15%), Positives = 242/764 (31%), Gaps = 47/764 (6%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + + I+++ F + L + + +I S + + + + Sbjct: 47 LMFGATTMGLGIWSMHFVGMLALTLPIKVLYDMEYVILSVILAIFVSSIALFTITKRNLH 106 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 R + M ++ + + T +V+ + I R Sbjct: 107 ARQLGIAGILMAAGISGMHYVGMAAMMIEITYDTRIVILSIMIAATASAAALWLLFYFRR 166 Query: 121 -----VWQRLFWLGLVTPIGIKCSMYLVG--SFFDFPLKISTFFGDADAIFTVVDLLSLF 173 + L+ I Y + F + + G ++ ++ L Sbjct: 167 DQSKYAYLYKLGSSLIMGAAIAGMHYTGMVAAHFYGTEQPTKQVGTQIEPESLAYIIVLA 226 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT- 232 T +LI LF + E +L ++ L Sbjct: 227 TFLLIGITLFGLFI---------NKRLSQKDTVIQESESWYRSLYKNNEYGIISLDTGGC 277 Query: 233 ----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL-----NYNQNFLQ 283 I G F + S N+ Sbjct: 278 IIKMNPAVTKIGGLREEEFINQHVSKIRMHIVEEQRELTKDSFAQSFAPNRNNFETTIFH 337 Query: 284 GVETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 L+ + + V +V+ + + A D LT LPN R Sbjct: 338 PNGNRVELSVLNVPVEIEGEVVGNHIIVKDITEENRVKEKIRYLAYHDELTDLPNRRKFN 397 Query: 342 QAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE-NEK 392 Q Q + + + ID + ++ G ++ + + + + Sbjct: 398 QVLHQSIEKSSQDSSSFAVMVIDIDRFKMINDSLGHSYGDIFLQGVSDRISKSAKGYHAT 457 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + ++ G E ++ + + + + ++ + F + Sbjct: 458 IARMGGDEFTILCETGADGREAASLADKIIEALKQPFTLKDSEFYISASIGTAIFPDHGT 517 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 LL + + Q + + + +R A+++ +L++Y Q Sbjct: 518 DAVALLKKADTAMYEVKKQGKN-GHLFYTTDFDAQLLENIEIERDLRKAIERKELVVYYQ 576 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + ++ G+++P F+P+ + L VL + + Sbjct: 577 PQFHSESNRMIGVEALVRWNHPTKGMLSPGVFIPIAEETGLIYEIGTWVLREACRQMKQW 636 Query: 567 PCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 SVNL Q+N+ I + + ++P + LEITE + S+ Sbjct: 637 HDKGGPLIPVSVNLSSHQFHQRNLVQYIKNILEETKLAPHFLELEITESMMM-DPAVSIS 695 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L+K G RI++DDFGTGY++ LK+ +KID F+ D+ N D IV +I Sbjct: 696 ILHELNKIGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRSFITDLSRNENDKAIVATIIS 755 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AK L V+AE +ET+ Q +L + + +QGY RP + Sbjct: 756 MAKHLKLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPLSANE 799 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 103/554 (18%), Positives = 201/554 (36%), Gaps = 30/554 (5%) Query: 205 APSLGKEKRAFT---LSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVG 256 E R + V++ + I G + Sbjct: 379 QRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGRHLSTLQ 438 Query: 257 KLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVR 310 + F + A+ + + Y L + + + + Sbjct: 439 TKQEKPISFQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVAIFS 498 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + +R + A D LT LPN + + +D +F Sbjct: 499 DITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKF 558 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + ++ + + ++ + + +L G E +++ + + + Sbjct: 559 INDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAISLITQKII 618 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S + + L + + + LL + Q+ Sbjct: 619 SACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKSCC-QFFTT 677 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 ++ T+Q+ L N +R AL + + LY QPI N + ++ + + G+++P+ Sbjct: 678 EINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVSVEALIRWVDPELGLISPN 737 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIR 595 F+PL + L VL++ R ++NL L Q + + R+ Sbjct: 738 TFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLSARQLEQTDFSERVSE 797 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + K+ + LE+TE + ESS+ + L K G R+++DDFGTGY+ LKR Sbjct: 798 ILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRF 857 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV+ I + DA I ++T +A + +V+A+ VET++Q L+++ V Sbjct: 858 PIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGVETREQLNFLNEIKVDE 917 Query: 716 LQGYLIGRPQPLAD 729 QGY I P P + Sbjct: 918 AQGYFISYPVPAEE 931 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 97/585 (16%), Positives = 203/585 (34%), Gaps = 27/585 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 ++ + L + F + AQ + E+ ++ A Sbjct: 744 LIIVRMRLVKIIWQEKNAFLASLVDVTDIQQAQEQLKILYQA---TEQSPVSVVITDAEG 800 Query: 225 VLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + + + I GY + + +++ + + Sbjct: 801 ---TIEYVNPKFEKITGYQRAEVIGQNPRILKSGETTTEEYKQIWKTITSGQEWHGEFHN 857 Query: 282 LQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + A ++ + + + + + QA D LT LPN Sbjct: 858 KKKNGELFWEAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRF 917 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 Q+ + + +D+ + ++ G ++ + + L ++++ Sbjct: 918 LAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKS 977 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E L++L + + + + S + + + + + Sbjct: 978 DTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDD 1037 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L+ ++ + ++ + +R AL + + L Sbjct: 1038 GNDVSVLMRNADAAMYLGKRGGRND-FKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLV 1096 Query: 508 AQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + G + +L + G ++PD+F+ + + L + V+ + + Sbjct: 1097 YQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVV 1156 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL P + + I I+ + LEITE+ + S Sbjct: 1157 NWQTQGSPIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSK 1216 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 IEQLH+ FR++IDDFGTGY+ L + + +KID F+ DI N +V++I Sbjct: 1217 GIIEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTII 1276 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L V+AE VET +Q +L G Y QGY RP + Sbjct: 1277 AMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEE 1321 Score = 64.6 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 11/151 (7%), Positives = 29/151 (19%), Gaps = 16/151 (10%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFII 250 + + L+ A + + L + I+G + + Sbjct: 416 DVSQQQGTEESLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGM 475 Query: 251 FTL---GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---C 304 F ++ T + + + Sbjct: 476 GWANYVHNDDRARVFNEWIKSIQTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVG 535 Query: 305 LLYMVRIYHRSEWLNRR-----WHLQALTDP 330 L + + +QA+ D Sbjct: 536 YLGTLTDITERKNAEEATNKINAQMQAIFDA 566 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 17/174 (9%), Positives = 37/174 (21%), Gaps = 27/174 (15%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRM----IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 +V + L + R+ ++ ++ E+R T+ Sbjct: 628 IVSIEYFLIIALQKRFFDARIVRLSPVETIAVVRDISDRKQTELALRESEERLKTIISTN 687 Query: 222 ALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 +L+L L + + G + Sbjct: 688 PNGLLILDLQGKVLFVNPAAEILFGRKQEDLMGQILGIPIIVNNY--------------- 732 Query: 277 YNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWH--LQAL 327 LQ + L +I L + + + QA Sbjct: 733 SEIEILQPSGKLIIVRMRLVKIIWQEKNAFLASLVDVTDIQQAQEQLKILYQAT 786 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 116/593 (19%), Positives = 209/593 (35%), Gaps = 38/593 (6%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + V + A + + I A+ R+ T+ Sbjct: 228 VRWVHERAEFRRAADGAALAGIGTVQDITDRKLAEQSLRQAA-----------TVFENTG 276 Query: 223 LSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCL 274 V++ ++ I GY + + V Sbjct: 277 EGVIIADAKNRIIAVNRAFTVITGYGPEEVIGRSPNLLRSGRHDAAYYDAMWRGVHEAGH 336 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + + L+V+ + + + R + R A D L Sbjct: 337 WQGEIWNRRKNGEIFPELLTLSVVRDHNGKVSHYVGVFSDISRMKETEARLQRLAHYDAL 396 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN L + L ID + ++ G + + I R L Sbjct: 397 TDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRL 456 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN-NTGLDMGYGA 439 ++ + L +L G E +++L + + + ++ + +G Sbjct: 457 RSRIRAEDTLARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASI 516 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + + L+ Q+ ++ +++ L +R L Sbjct: 517 GISLYPLDTDDATQLISNADAALYQAKEAGRN-VYRFYTADLTRAAHERLGLEAALRRGL 575 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 ++G+ +L+ QP+ E G + ++ G++ P +F+PL + L VL Sbjct: 576 ERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVL 635 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 ES + + +VNL ++ + + R + LEITE Sbjct: 636 ESACRQGREWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTV 695 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 +A+ ++ + L G R++IDDFGTGY++ LKR D +KID FV+DI + D Sbjct: 696 MEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDEND 755 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 MIV ++ +A L V+AE VET +Q A L LG + QGYL+GRPQ AD Sbjct: 756 RMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAAD 808 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 16/170 (9%), Positives = 35/170 (20%), Gaps = 9/170 (5%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 V L + F ++R + RR + A T SW Sbjct: 104 VLVDTLKTPFRDAASGRRGVVGISRDVTVFRETAEALRRSQENLERAQAVARTGSWYVD- 162 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + P + L + + L A + + + Sbjct: 163 --FVSGQMDWSAETCRLFGQAPGCVPSYELFLSVVHPEDQALVEAAWRQAVARGDYDLTH 220 Query: 284 G---VETEYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + ++ + V+ + + A Sbjct: 221 RVIVGGEVRWVHERAEFRRAADGAALAGIGTVQDITDRKLAEQSLRQAAT 270 Score = 43.0 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 4/125 (3%), Positives = 18/125 (14%), Gaps = 11/125 (8%) Query: 211 EKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFI---IFTLGVGKLRYPF 262 + L + V + G + Sbjct: 18 DSLLRALIDVIPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDLFDLSTADSYR 77 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLN 319 +++ + + + + ++ + R Sbjct: 78 GYDNAVLASGRSSRNEEWIVYPDGRRVLVDTLKTPFRDAASGRRGVVGISRDVTVFRETA 137 Query: 320 RRWHL 324 Sbjct: 138 EALRR 142 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 736 bits (1901), Expect = 0.0, Method: Composition-based stats. Identities = 120/755 (15%), Positives = 252/755 (33%), Gaps = 55/755 (7%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLC-----VMLSILFIFG---------WRGVV 65 + L+ +S A++ F+ L ++ +++++ G W Sbjct: 81 IAAALLAMSGLDGLHAMMPDGESFVWLHSLATAFGGLLFAMIWLPGHWFKPVMRHWPLNA 140 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW--- 122 ++ Q V+ + L + LT R+ Sbjct: 141 FLMAAAMGIYSILQPGQIPQMLASGQFTQAAVIMNIGGGLFLLLAAVKLFLTYRHSAKSE 200 Query: 123 --QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 F ++ I + + + G ++ VV + + Sbjct: 201 DLLFFFQCLILASAAITFMQSSIWDMPWWGWHMQRLAGYTLTLWLVVKTAKTIEGKTLLS 260 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 L + I A+ R E + A + ++ I Sbjct: 261 NRL--LKQQIEDRKQAENQLRIAATAFETHE----AIMITDAHANII---RVNQAFQNIT 311 Query: 241 GYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 GY + + + + + Y + Sbjct: 312 GYSPEDVIGKNPRVLSSGRQGSEFYAAMWKRLLGSGSWTGEIWDKRKNGEVYPKWLTITA 371 Query: 298 LISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK---- 350 + + + + + A D LT LPN R L Q Sbjct: 372 VKDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARS 431 Query: 351 ----SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + L +D + ++ G + + R + +++ + + ++ G E ++++ Sbjct: 432 NHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLIE 491 Query: 407 GPETEGR-----LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 T+ + + + + + + GN+E++ LL Sbjct: 492 EIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRHA 551 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEG 516 Q+ + + + + L +R A+ L LY Q + Sbjct: 552 DLAMYQAKESGRN-GVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQLTSDHRP 610 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPR 574 G + ++ + G+++P +F+P+ + +L VLE+ K L + Sbjct: 611 LGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLI 670 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++N+ + + + L + ++P + LE+TE S+ + + L G Sbjct: 671 LAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALG 730 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++A+DDFGTGY++ LK+L D IKID FV D+ T+ DA++V++I +LA ++V Sbjct: 731 VKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNV 790 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET+ Q L + G QG+L G+P P+ + Sbjct: 791 IAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDE 825 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 116/569 (20%), Positives = 211/569 (37%), Gaps = 29/569 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIA 240 ++ ++ E+R ++ A + L + Sbjct: 122 AWDILEGFIQDVTERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMY 181 Query: 241 GYLVPVFFIIFTLGVG-----KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 GY P I + + + N+ + ++ Sbjct: 182 GYDSPQALISTLRDIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENA 241 Query: 296 AVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK-- 350 + + LL V + QA D LT LPN L +Q Sbjct: 242 RSVYNSDGTLLFFEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSE 301 Query: 351 ------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D +F++ G + ++ + L ++E++ + + G E +L+ Sbjct: 302 RYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLL 361 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ E + H + + S+ N+ + + + LL Sbjct: 362 LTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSA 421 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEG 518 ++ ++ T ++ LLN +R A+ D +L+ QP + + G Sbjct: 422 MYKAKELGRN-NFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIG 480 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSV 577 + ++ G+++P F+PL + L VL + + SV Sbjct: 481 AEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISV 540 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL P L + +I + R+ + Q + LEITE ++ E S + QL G +I Sbjct: 541 NLSPRQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKI 600 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ LKR D +KID FV+DI T+ A IV++I L + +L+V+AE Sbjct: 601 SLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAE 660 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +ET+ Q L G QGYL+ +P P Sbjct: 661 GIETEDQFQFLLANGCDEGQGYLMSKPVP 689 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 5/95 (5%), Positives = 22/95 (23%), Gaps = 9/95 (9%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLN------LTWAVSTLCLLNYNQNFLQGVETEYSL 291 + GY + ++ +P + AV + ++ + + Sbjct: 50 ALTGYTEEDLLFNSRVSYDQITHPDDRRHVRDTILEAVRNNRRFDIEYRIVRADGSIRHV 109 Query: 292 AFILAVLISFSVCL---LYMVRIYHRSEWLNRRWH 323 + + ++ + + Sbjct: 110 WERGTNISHDNKAWDILEGFIQDVTERKQADEALR 144 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 127/687 (18%), Positives = 249/687 (36%), Gaps = 41/687 (5%) Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 +S+ L + + TR + RL G V + + Sbjct: 90 PVSWGTLPYRLQYLLRASRAFADLSLSESKTRALLSNLPDII-IRLHREGAVLDMQVGSY 148 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT----------RM 189 ++ +G + S A + + + + F + R+ Sbjct: 149 VFDMGEWLHSAEDGSYHLPSDIAALIGTRIDAALRGKGMQMLEFQWSRDPMCVRHWEARI 208 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL-----LLCTPYENDFIAG 241 + +L R+I +E + + + ++L+ ++ + I G Sbjct: 209 VPRDRQEVLLVVREITQRRQQENQLRLWAKVFEASNEAILITDANFRIISVNRAYETIMG 268 Query: 242 YLVPVFFIIFTLGVG---KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + TL VG + + NL + + E+ F + + Sbjct: 269 YREQDVLGVDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQV 328 Query: 299 ---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + + A D LT LPN L Q Sbjct: 329 TNSRGEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQG 388 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + +D + ++ G + ++ + L ++ + + +L G E +++ Sbjct: 389 EKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPR 448 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 TEG L + L + L + + + E L+ Sbjct: 449 VRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYL 508 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + ++ +T ++ L + +R+A+D GD L+ QP + + G + Sbjct: 509 AKEKGRN-NYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEA 567 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 ++ + G+++P +F+PL + L VL +K LA SVN+ Sbjct: 568 LIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNIS 627 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L Q + R+ + + + P A+ LE+TE + +S++ ++ L + GFRIAID Sbjct: 628 ALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAID 687 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ L+ L +++KID FV++++ IV SI LA+A +AE VE Sbjct: 688 DFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVE 747 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPL 727 T+ + +L G + +QGY RP P Sbjct: 748 TRAEFDVLQARGCRLMQGYFFARPMPP 774 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 734 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 116/697 (16%), Positives = 233/697 (33%), Gaps = 48/697 (6%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQL--------GTRWRYGLTSRYVW-Q 123 N ++++ + V A + G T + Sbjct: 449 AVNFGGMKMAWIGILDQVTGLVEPVASYGAGTEYLDNLHVSIDGHEPGGSGPTGIALRED 508 Query: 124 RLFWL------GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 R FW + + + Y G+ PL ++ + + Sbjct: 509 RPFWCQDFANDPVTAVWHERAAEYGWGASASIPLHCHGIVVGTLTLYA-EEKNAFDEPAR 567 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---- 233 + + A+ ++ L + + S+++ L Sbjct: 568 NLLLEMAMDISFALERFDAETERKKMSETLL----KLSLAVEQSPNSIVITDLDANIEYA 623 Query: 234 -YENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + GY + F + + ++ ++ + TEY Sbjct: 624 NSNFTKVTGYSLDEVLGKNPRFMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEY 683 Query: 290 SLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + +++ + + L + R D LT LPN L + Sbjct: 684 IESVLISPVSQVDGRVMNYLAIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKY 743 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + L +D+ + ++ G + + + + L +++ + + + G Sbjct: 744 ALSLAQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGG 803 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +L+L G E H+ L S+ + L + + E + L Sbjct: 804 DEFILILPG-TDENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLS 862 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 + + + + + L N +R AL +G L L+ QP Sbjct: 863 KNADTAMYRVKHDGRN-GFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQ 921 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-K 571 + G + +L + G ++P +F+P+ VL + +K L Sbjct: 922 DGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLP 981 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL Q N+ + + + + + LE+TE A + + ++ +++LH Sbjct: 982 PMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLH 1041 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G +++IDDFGTGY++ LKR + +KID FV DI + D IV +I ++A + Sbjct: 1042 TGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLG 1101 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +AE VET Q + L G +QGY +P P Sbjct: 1102 MQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAE 1138 Score = 43.8 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 9/140 (6%), Positives = 27/140 (19%), Gaps = 10/140 (7%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP------YENDFIAGYLVPVFFI 249 + R + + + L ND + Sbjct: 279 MRKQIRLRTQQLADSSSQLRATLDAIPDLLFEIGLDGHFYSYHSSRNDLLTAPATSFIGK 338 Query: 250 IFTLGVGKLRYPF-LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA---VLISFSVCL 305 + ++ + N L + E ++ + + Sbjct: 339 KIGDVLPPDAADICMSALQEANMTGRSNGKTYALSLPQGESWFELSISKKQDAKNQAPRF 398 Query: 306 LYMVRIYHRSEWLNRRWHLQ 325 + +VR + + Sbjct: 399 IVLVRDVTQRKVNETHILRL 418 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 105/563 (18%), Positives = 215/563 (38%), Gaps = 27/563 (4%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY-------LV 244 S ++ E++ ++ + + ++ L + + Sbjct: 138 SIRSDITARKQMEDELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPD 197 Query: 245 PVFFIIFTLGVGKLRYPFL-NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 +F V R F + A ST + ++ Sbjct: 198 EEIHNLFEWIVEDDRDIFAYAIQHAFSTRKEYMVECRINTQRNDVIWTESKINPIMDEEG 257 Query: 304 CL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + L + R + H A D LT LPN R Q ++ + Sbjct: 258 NVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAV 317 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D + ++ +G + + + L ++ + + +L G E ++ + Sbjct: 318 LFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRN 377 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + R + ++ + + + + LL + + Sbjct: 378 EATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRG 437 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARL 526 D + + ++ +++L+ N +R A++Q +Y QP + G + ++ + Sbjct: 438 KN-GYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWV 496 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + GI+ P++F+P+ + + +L+ K + SVNL + Q Sbjct: 497 HPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQ 556 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 K++ I + + +SP + LEITE E + ++Q+ G +I+IDDFGTGY Sbjct: 557 KDLVEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGTGY 615 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 +++ +K L D IKID F++DI N IV++I +A++ +++V+AE +E Q A Sbjct: 616 SSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVA 675 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L + G + QGYL +P P D Sbjct: 676 ALKENGCDHGQGYLFSKPLPTDD 698 Score = 71.9 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 8/138 (5%), Positives = 28/138 (20%), Gaps = 6/138 (4%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI--- 249 + + + LA ++L + I+ Y Sbjct: 18 LREKDGELNMVVNELADVKYALDQSTILAITDHKGIILRANEQFCRISKYERSELIGNDH 77 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 + F + + + + + Y + + + + L Sbjct: 78 RILNSGYHPKSFFKEMWSCIRSGQVWRGEIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYL 137 Query: 307 YMVRIYHRSEWLNRRWHL 324 + + + Sbjct: 138 SIRSDITARKQMEDELKR 155 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 732 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 115/592 (19%), Positives = 217/592 (36%), Gaps = 29/592 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 D L + ++ ++ S ++ E+R L A Sbjct: 356 LIRADGSRLPVIKTVSRVVLDGREHLLESFV-DISRRKQVENSLKESEERYRMLVENQAD 414 Query: 224 SVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPFLN---LTWAVSTLCLL 275 V+ + + G L V L + + + Sbjct: 415 LVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALLPVIMLPEQLATAAGMEQMICSDTSY 474 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + + L + + S ++ M R + A DP+T Sbjct: 475 YREYLSPTREGK-RWIGWALRCIFNQSGQAEAIIGMGRDITDRKTAESTIEQLAYHDPVT 533 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN L G + L +D + ++ G M +R + LL Sbjct: 534 GLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLL 593 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAW 441 ++ ++ + +L G E ++++S + + + +V + + ++ + Sbjct: 594 DCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGI 653 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + + LL Q+ ++ + T+++LL +T+R AL++ Sbjct: 654 SLFPRDGRDAEELLKNADMAMYQAKEAGRNTC-HFFSPELNMRATERLLLESTMRRALER 712 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + L QP + G + +L D G++ P+ F+P+ + L VL Sbjct: 713 EEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAE 772 Query: 559 LLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + + R +VN+ Q+N+ RI ++ + P + LE+TE Sbjct: 773 ACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILMETGLDPALLELELTESAVM 832 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 N E ++ + QL K G ++IDDFGTGY++ LK D +KID FVK + + DA Sbjct: 833 ENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDA 892 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +I LA + L+VVAE +E +Q +H+ +QGY + RP + Sbjct: 893 TIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEE 944 Score = 65.0 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 24/240 (10%), Positives = 66/240 (27%), Gaps = 17/240 (7%) Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 ++ + +R+ L Q L + P I L + ++ Sbjct: 165 IIQTVAVAADGAIHANFRFPLAETPCEQVLTNGLRIYPKAIPELFPLDHLALEMGVESYI 224 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYY-LTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 + + +++F+ I + ++ +++ R+ E R Sbjct: 225 GIPLVSSRRITLGPMAVFSRRPIRETHLAASMLQVFAVRAASELERRQAERVLKETEARL 284 Query: 215 FTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFFI----IFTLGVGKLRYPFLN 264 T+ +L++ ++ G F + R P + Sbjct: 285 KTIVDSVHTGILVIDPENHRIVDVNELAASSLGRTREEMIGTSCHRFICPNEEGRCPITD 344 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFIL-AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 L + N ++ ++ + + + V++ LL R + + Sbjct: 345 LQQELD-----NEERDLIRADGSRLPVIKTVSRVVLDGREHLLESFVDISRRKQVENSLK 399 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 103/606 (16%), Positives = 203/606 (33%), Gaps = 29/606 (4%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 + P I I V + +L + R I + R Sbjct: 314 ALLRQPYDIEHRILVNGEIRWVREKANLDFDAHGNAVYAIGTVRDITRYKQEEATLRLAA 373 Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYP 261 + + + + ++GY Sbjct: 374 RVFDSSGEAILITDENVRV------VAVNHSFVAMSGYRSEEVMGKNPRMLSSGRHDAEF 427 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWL 318 + + ++ Y + + + + R Sbjct: 428 YRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSITAVRDEHGKVVNYISIARDTTEQTEA 487 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + H A D LT LPN L + S L +D ++++ G Sbjct: 488 EKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGHS 547 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 + ++S+ + ++E + + +L G E +++L E + L + Sbjct: 548 VGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLRE-AGESAASVVAQKLLIALATPYD 606 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + + + L+ ++ ++ + Sbjct: 607 LDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRN-NFQFFVPEMNFRVDL 665 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + +R AL++G+L L QP + G + ++ G ++P +F+P+ + Sbjct: 666 LFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEE 725 Query: 545 FNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 VL + +A +VNL L Q ++A I + + Sbjct: 726 TGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLD 785 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + + LEITE + +++ + ++ G +++IDDFGTG+++ LK++ + +KID Sbjct: 786 ARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKID 845 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 F++DI T+ DA I+RSI L +L V+AE VETQ+Q L G +QGY R Sbjct: 846 QSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSR 905 Query: 724 PQPLAD 729 P D Sbjct: 906 PLLAED 911 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 109/584 (18%), Positives = 218/584 (37%), Gaps = 28/584 (4%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 L +++ RMI + H ++ + + + +L Sbjct: 377 LGRGMIVSRDDQGNPLRMIGT-HTDITERKKIEQQLRIAATAFESQEGIVVTNENFNILR 435 Query: 232 TPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 I GY + + N+ ++ + + Sbjct: 436 VNQAFIDITGYEAEEATGKKPNILKSGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEI 495 Query: 289 YSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 Y + + + + M ++ + R A DPLT LPN R Sbjct: 496 YPEHLTITAVKDADGQTTNYVGMFTDISVAKAASERIENLAFFDPLTNLPNRRLFSDRLT 555 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + L +D+ + ++ G ++ + L ++E + + +L Sbjct: 556 QALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARLG 615 Query: 398 GSELLLVLS-----GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQE 449 G E +L++ E +++ + + + ++ + F+G+QE Sbjct: 616 GDEFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPYQLQSHEYLSTPSIGISLFNGHQE 675 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + + LL Q+ L + ++ +V L ++ A++Q LY Q Sbjct: 676 SSEDLLKHADIAMYQAKKAGRN-TLRFFDPLMQETINMRVDLERELKKAIEQKQFELYYQ 734 Query: 510 PIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 N + G + ++ + GI++P +F+P+ + L + VL L Sbjct: 735 VQMNSAGQPSGAEALIRWRHPERGIISPIQFIPVAEETGLITQIGEWVLNQACLQLQAWQ 794 Query: 568 --CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 K ++N+ LQ + A ++ + +HI + LE+TE N E ++ Sbjct: 795 LDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLIDNIEYVIH 854 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L + G + ++DDFGTGY++ + LK L +KID FV+D+ T+ + IV +I Sbjct: 855 TMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTIIT 914 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + L+V+AE VET +Q LL+ G QGY P + + Sbjct: 915 MAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEPLSINE 958 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 120/701 (17%), Positives = 227/701 (32%), Gaps = 37/701 (5%) Query: 56 LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCA-CAILRWQLGTRWRY 114 + G +P G+ V G+ IL + TR Sbjct: 156 ALVKGGLHALPAAAGLGEATRRMREGGVDAVVVDYGAADASAPAGRYGILTERDVTRLVA 215 Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 T+ L LVT + + ++ + +V + + Sbjct: 216 QRTADRALGELASRPLVTCRADDSLYRVRMLLAERHIRHIGVLDGEGELVDLVSFKDILS 275 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 + H A ++ S A + + V++ + Sbjct: 276 G---------MELAYVHELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDAHARI 326 Query: 230 LCTPYENDFIAGYLVPV---FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L + GY + + + + + Sbjct: 327 LSVNPAFTRMTGYAPEEVVGLNPSVLNSGRQSPAFYARMWDGLLGDGQWQGEVWNRRKTG 386 Query: 287 TEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y + + + R + R A DPLT LPN R L+ Sbjct: 387 EVYPQLLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLLDDR 446 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + +D + ++ G + + I L +++++ + + Sbjct: 447 LQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVAR 506 Query: 396 LPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 + G E L+VL+ M + R ++ L + + + Sbjct: 507 MGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDAD 566 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ ++ + E ++ ++ +++ L + AL + +L LY QP+ Sbjct: 567 TLVKHADVAMYRAKDEGRN-SFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVM 625 Query: 513 ---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 E + +L D G+++P F+PL L VL S + Sbjct: 626 KAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEA 685 Query: 570 K-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 VN+ ++ A + + ++P + LE+TE + + ++ ++ Sbjct: 686 GGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLD 745 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L G +AIDDFGTGY++ LKR D +KID +FV+ I NT DA +V +I L Sbjct: 746 HLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGH 805 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L VVAE VET +L + G QG+ P P + Sbjct: 806 SLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEE 846 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 99/567 (17%), Positives = 201/567 (35%), Gaps = 28/567 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLV 244 I ++ E+R T+ + + + L GY Sbjct: 104 IQGFFRDITARKKTEKALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNE 163 Query: 245 PVFFIIFTLGVGKLRYPFLNL----TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + V L + L + + +++ + + Sbjct: 164 EELLQMKITDVTHPDDIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFD 223 Query: 301 FSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + +++ R + R A D LT L N +++ Sbjct: 224 ANGNPLYTVPVIQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSR 283 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + +R L ++EN+ + +L G E +++LS + Sbjct: 284 FALMFLDLDRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYK 343 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + L + + + S + + + + LL + Sbjct: 344 EDANLPRVADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAK 403 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEIL 523 ++ + ++ + +R AL+Q + + QP + + G + +L Sbjct: 404 ESGGD-TFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALL 462 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPL 582 G++ P +F+ L + NL V+ + + + R +N+ Sbjct: 463 RWQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGR 522 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 +Q + + RL +P+ + EITE + ++++ +E L K G +AIDDF Sbjct: 523 QFVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDF 582 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK L + +KID F+ D+ N D IV + +AK L V AE VET+ Sbjct: 583 GTGYSSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETE 642 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q + K +QG+ RP ++ Sbjct: 643 GQYGFVQKRECDEVQGFYFSRPLSPSE 669 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 6/121 (4%), Positives = 26/121 (21%), Gaps = 10/121 (8%) Query: 213 RAFTLSWLAALSVLLL-----LLCTPYENDFIAGYL---VPVFFIIFTLGVGKLRYPFLN 264 + L + + ++ ++ GY + L Sbjct: 2 QYADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHADFHCDCQDR 61 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRW 322 + +S + + + + +++ + R + + Sbjct: 62 IQRLMSGETVPRFEVEYKTRYGHKIIAEGSISLYKENGEPCGIQGFFRDITARKKTEKAL 121 Query: 323 H 323 Sbjct: 122 Q 122 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 98/538 (18%), Positives = 211/538 (39%), Gaps = 26/538 (4%) Query: 217 LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + + S+++ +L + + GY + + + Sbjct: 21 IFEYSNESIIITDAQNRILFVNPAFEIVTGYSAEEVIGKNPRILQSGMHDKQFYKKMWND 80 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQ 325 + + + Y ++V+ + M + + Sbjct: 81 IKQHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVEQLTRL 140 Query: 326 ALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 AL D LT +PN LE+ E + L +D + ++ G + ++ Sbjct: 141 ALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVGDMLLK 200 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 + L ++++ + + + G E +++L + +M + R +N+ + Sbjct: 201 ETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKRPFCFNHQEIY 260 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + + + L+ Q+ + + G + L Sbjct: 261 ISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRNQ-YALYHAGMHGNGKQLFQLETA 319 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL++G+ LY QP + K+ + ++ + G ++P F+PL + L Sbjct: 320 LRKALERGEFELYYQPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGLITPI 379 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 ++ + L + S+N+ P+ Q + ++ + + +++P+ + LE+ Sbjct: 380 SDWIMMQACEHLKQLQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVNPRLIELEL 439 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE +AE S+ + +L G IAIDDFGTG+++ L R DI+KID F K + Sbjct: 440 TESAVMPHAEQSVERLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKIDRSFTKQLS 499 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D+ IV++I +A + + VVAE VET++Q +L K ++QGY + +P +++ Sbjct: 500 RYQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSKPLSISE 557 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 730 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 107/597 (17%), Positives = 221/597 (37%), Gaps = 34/597 (5%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL-------GKEKRAFTLS 218 ++ ++ + F + R I S + R+ + K A + Sbjct: 108 MLWTITAVKDSEQKILWFNCIGRDITSHKETEEELRKAKDQLKITVDQQTEQLKLATAVF 167 Query: 219 WLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVS 270 ++ V + + I GY + + ++ Sbjct: 168 KHSSEGVTITDSNNNIRYINDAFTHITGYSEEEVIGQNPSILKSNRHKPSFYKGVWKSIK 227 Query: 271 TLCLLNYNQNFLQGVETEYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 T + + + + + V + + R ++ R+ QA Sbjct: 228 TNGMWEGEIWNRRKNGEVFPEWISIKAITDVKGEVVNYIAVFRDISEAKASQRKIQHQAY 287 Query: 328 TDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN L +++ + + +DN + ++ G ++ ++ Sbjct: 288 HDALTGLPNRTLLIDRIRKAIASSNDRKSCIALLFIDLDNFKNINDSLGYVIGDSVLQQA 347 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMG 436 + + E + + ++ G E +++L + + M + + ++ + + + Sbjct: 348 AARIREFIDEKDTVSRIGGDEFVIMLKDLQDKHDAAVMADTIINLFAQALTVESHQFTIT 407 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + + +T L+ ++ ++ +++ + N +R Sbjct: 408 PSIGIALYPEDGKTPYSLVRNADTAMNKAKQEGRNR-YHLFTPGLTESALRRISMENQLR 466 Query: 497 TALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 +Y QP N G + ++ ++ DG I++P +F+PL + L Sbjct: 467 QTASDNGFTVYYQPKVNLHDNTIVGMEALIRWIQPDGTIISPAEFIPLAEETGLIVPIGE 526 Query: 554 QVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 QVLE+ + SVNL Q+ + I+ + I P + LEIT Sbjct: 527 QVLEAACLDTVELNQRFGTNLKVSVNLSLRQFKQEQLMKNIMDIIAMTAICPSCLELEIT 586 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + E + +E++ K G ++IDDFGTGY++ LK + +KID FV + Sbjct: 587 ESTVMDDIEQTKTILEKMDKLGITLSIDDFGTGYSSLSHLKNMPMHTLKIDQSFVAGLPH 646 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 N D +V++I LA++ LS VAE +ET +Q + +LG + +QGY P PL + Sbjct: 647 NKSDQKLVKAIMSLARSFDLSTVAEGIETPEQYNYMRELGCEVMQGYYYSPPVPLEE 703 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 730 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 121/693 (17%), Positives = 231/693 (33%), Gaps = 37/693 (5%) Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAIL--------RWQLGTRWRYGLTSRYV 121 G+ N+ F L + L A+ L R L + V Sbjct: 169 GIVARNVMGFVLDAQPMRAAEMWERLDQLAIVALTLPPAQRERVVNLIAHGRIILDRKPV 228 Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 + L P G + + + + +T + V L L ++I + Sbjct: 229 LDTITRDILALPTGARAESVI--HAYVDGYQHATDRAHTYRVLLFVVALGLAGYLMIAIL 286 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEN 236 + + + + + + + + A+ + + ++ Sbjct: 287 RLQRTSLALAGANEHLEERIQTLRLTESELHLYANVFTNASEGMAITDAQARIVAVNPAF 346 Query: 237 DFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 I GY + + + + + + Y Sbjct: 347 TDITGYSIEEIHGRTPAVLASGRQDAAFYREMWATLGKRGQWQGEIWNRRRSGEIYPEWL 406 Query: 294 ILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 + + + + + R A D LT LPN L+ Sbjct: 407 SITAITEGDGGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAILK 466 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + L +D + ++ G + +R + + L ++E + + + G E + Sbjct: 467 ARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFV 526 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 +VL E + + + L + + G+ LL Sbjct: 527 IVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNAD 586 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 ++ A ++ + ++LL + +R ALD+ +L LY QP + Sbjct: 587 AAMYRAKADGRN-GFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCI 645 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRF 575 EG + +L D G++ P +F+P + L VL + L Sbjct: 646 EGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPV 705 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL ++I + + + + LE+TE + E ++ + +L G Sbjct: 706 AVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGV 765 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +AIDDFGTGY++ L++ + +KID FV DI + D I ++ LA L+V Sbjct: 766 TLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVT 825 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET QQ L + G LQG+L G+P+P Sbjct: 826 AEGVETAAQQHFLARHGCDQLQGFLFGQPEPAE 858 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 107/570 (18%), Positives = 201/570 (35%), Gaps = 29/570 (5%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 R I + R + + + +L I Sbjct: 55 AYLCATARDISGRRQTERQLRLAAQVFESSNE---AILISDPDN---RILTVNRAFGHIT 108 Query: 241 GYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 GY F + + + + + ++V Sbjct: 109 GYGEAEVRGSKASMLFSDRHEPAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISV 168 Query: 298 LISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG----- 349 L + + + R A D LT LPN + Q Sbjct: 169 LQDGQGEISHFVALFTDISERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQ 228 Query: 350 ---KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + +D+ + ++ G ++ + R L ++ + + + G E +L+L Sbjct: 229 HNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILP 288 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 G + + + L +G + +Q LL Sbjct: 289 SINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMY 348 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYD 520 + AH ++ Q +++L+ N +R A++Q L L QP + G + Sbjct: 349 HAKAHGRN-TFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCE 407 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNL 579 +L D G++ P +F+P+ L VL+ + + R +VN+ Sbjct: 408 ALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNV 467 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L++ + + +R+ + + LE+TE ++A+ + + + G R+AI Sbjct: 468 SAHQLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAI 527 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR D++KID F+ D+ + +A IV +I LA A + +AE V Sbjct: 528 DDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGV 587 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E + QQ L LG + +QGYL+G P + Sbjct: 588 ENENQQRFLQTLGCEAMQGYLLGSPL-AEE 616 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 99/606 (16%), Positives = 205/606 (33%), Gaps = 24/606 (3%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 V + + + + + ++ + R + Sbjct: 212 VRGAVGVSVPMQPYQAMEGQAIRIQAISHGAFWLVGVAGILLIGRRSAGRLTEKALADEE 271 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLR 259 + +L + GY Sbjct: 272 TRLAAHVFSNALEATLITDPKG---RILRINPMFTELTGYGEAEVVGGNPRIIRSNHHDA 328 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSE 316 + + A+ + + + + + + R Sbjct: 329 DFYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDITEQV 388 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 R A D LT LPN + + + L +D + ++ G Sbjct: 389 EAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKKVNDTMG 448 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 ++ + L ++ + + +L G E ++L + + + + Sbjct: 449 HRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKILASLHAP 508 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 I + + +G F + + LL Q+ A + ++ + Sbjct: 509 IFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGR-FNFYSAEMTKRE 567 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ L +R A+++G ++ QP +N G++ ++ G+++P F+PL Sbjct: 568 EHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPVDFIPLA 627 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + +L R D+ V+ + +VNL + + ++ ++ ++ + Sbjct: 628 EEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVRQVLEDTGF 687 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + + LEITE +++L G ++AIDDFGTGY++ LKRL + +KI Sbjct: 688 PAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKI 747 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+DI ++ D M+V SI +A + L VVAE +E + Q A+L +QGYLI Sbjct: 748 DRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIA 807 Query: 723 RPQPLA 728 +P P Sbjct: 808 KPMPAE 813 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 96/561 (17%), Positives = 196/561 (34%), Gaps = 31/561 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF 248 ++ ++ + ++L+ ++ + GY + Sbjct: 645 VQDITARKKQEDALR----LYASIFEHSGEAILIADQARHIIAVNPAFTNLTGYALDDIR 700 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 G + + ++ + T Y ++V+ Sbjct: 701 GEEPTILAGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVL 760 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + + + A DPLT L N +L+ ++ + Sbjct: 761 THYVASFTDITERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVF 820 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + + + R L +++++ + +L G E ++VL+ Sbjct: 821 LDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGA 880 Query: 415 QHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + L + L + + + L+ + + Sbjct: 881 ARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRD 940 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + ++ K++ + +R A++ G L+ QP N + ++ Sbjct: 941 -NVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHP 999 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 G+++P +F+P+ + L VL + L +VNL L Sbjct: 1000 REGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSP 1059 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + R + + + LEITE A + +S+ ++ L G ++IDDFGTGY+ Sbjct: 1060 ALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYS 1119 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK L D +K+D FV +I N D I + LA + L VVAE +ET+ Q+ L Sbjct: 1120 SLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRL 1179 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L ++QGYL P P Sbjct: 1180 LASHRCDFMQGYLFSAPLPAE 1200 Score = 45.0 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 13/180 (7%), Positives = 35/180 (19%), Gaps = 12/180 (6%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 + + S+ + + A+ + + ++ A Sbjct: 486 WVARDGGRRLIEWSNSVLHDAQGKVEFVVAVGNDVTDKMRAEAALKESESRLKEAQRIAQ 545 Query: 216 TLSWLAAL--SVLLLLLCTPYEND----FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV 269 SW L L+ + + + + +V Sbjct: 546 VGSWALDLVTGKLIWSDEMFRIFETDEAAFGQSYEAFLDALHPEDREHVNKAY---MHSV 602 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQA 326 + + L L + + V+ + L A Sbjct: 603 TNHTPYDLVHRLLLPDGRVKWLHGRGETRYGKNGDPIASCGTVQDITARKKQEDALRLYA 662 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 112/570 (19%), Positives = 189/570 (33%), Gaps = 29/570 (5%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 R I + R+ A + +L I+G Sbjct: 772 YLMGFFRDITERKQTEDALRQGAAVFESSHNG---IIITDLDG---HILAANQAYADISG 825 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + R + + + + Y ++ + Sbjct: 826 YTESELLGQNPRILNSGRQSRDFYRKMWANIKEAGSWQGELWNRRKNGEIYPTWLAVSAV 885 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + + A DPLT LPN L Sbjct: 886 RNDQGKATHYVGISSDLSQLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHH 945 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 L +D + ++ G + + ++ L M+ + L +L G E LLVL Sbjct: 946 NQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSEDLLARLGGDEFLLVLEH 1005 Query: 408 PETEGRLQHMVNILN---SRQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + L ++ + + +G F + ++ + L+ Sbjct: 1006 INEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMH 1065 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 Q+ E +S + + + L N +R A+ L +Y QP + G + Sbjct: 1066 QAKTLGRN-TYHFYTEDLSRASNEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAE 1124 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNL 579 ++ + G++ P +F+PL + L VL+ +VNL Sbjct: 1125 ALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNL 1184 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P L+ NIAG I ++ + LE+TE E + + L R+AI Sbjct: 1185 SPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAI 1244 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR DI+KID FV DI + D I +I + V+AE V Sbjct: 1245 DDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGV 1304 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET++Q L G QGYL P P + Sbjct: 1305 ETREQLEFLQARGCDLYQGYLTSPPIPAEE 1334 Score = 80.0 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 32/140 (22%), Gaps = 10/140 (7%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFF 248 ++ E R ++ A +LL + + GY Sbjct: 653 EDITERKQAETALRDSEDRFRSIFNNAIDGILLADSGTRKFIMGNSAIARMLGYSNEELL 712 Query: 249 IIFTLGVGKLRY---PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVC 304 + T + + V L+ N + + + + L V Sbjct: 713 QLGTEDIHPEQDKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKASPLRIGDKVY 772 Query: 305 LLYMVRIYHRSEWLNRRWHL 324 L+ R + Sbjct: 773 LMGFFRDITERKQTEDALRQ 792 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 22/224 (9%), Positives = 53/224 (23%), Gaps = 24/224 (10%) Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 Y R+ P + V L IF + + L V+ Sbjct: 338 YRGIRVLAATRPIPGTDWHLVAKVDRDEVMALPNEM-------IFWLGLVAILIVFVVTS 390 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--LLCTPYEND 237 ++ + R H ++ R + A++ + Sbjct: 391 AVML--IWRQQQRLHRMELANRSSEQD-KQLKLFYDLPFIGMAITSPATKRWVYANDRLC 447 Query: 238 FIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVS-TLCLLNYNQNFLQGVETEYSLAF 293 + GY I + V+ N + F++ + ++ Sbjct: 448 DMLGYSRDDLLKTAWIDLTHPDDVAGNLKEFERMVAGETDGFNIEKRFIRKDGSPITVNL 507 Query: 294 IL---AVLISFSVCLLYMVRIYHRSEWLNRRWH-----LQALTD 329 + ++ +V + + ++L D Sbjct: 508 DVKCTRRADGKPDLIVALVDDITQRKQTELALRAKEATYRSLFD 551 Score = 49.2 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 12/154 (7%), Positives = 27/154 (17%), Gaps = 27/154 (17%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-------------CTPYE 235 +IV+ ++ KE +L V + Sbjct: 521 LIVALVDDITQRKQTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPA 580 Query: 236 NDFIAG------YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 G V + F + C + + L Sbjct: 581 FGKTTGLKDVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEA-CHWEHYLSALGK----- 634 Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 F ++ + + + Sbjct: 635 --WFSFSIYSPAPGEFVVVSEDITERKQAETALR 666 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 91/586 (15%), Positives = 206/586 (35%), Gaps = 28/586 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP--SLGKEKRAFTLSWLA 221 + + + F + + I A+ + + + + Sbjct: 221 YWMNTTIVPFLDDRGVPYQYVSIRTDITDRIEAETALAEALQNDFRRTVQNLQNCVFKIV 280 Query: 222 AL--SVLLLLLCTPYENDFIAGYLVPVFF-IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + LC + + + + + ++ + + + Sbjct: 281 TDQRGNITYTLCEGKIAEELGLTSERMLRKTSYEIFPYEVAEQMESYFRRAFAGESVTFE 340 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 +Y + V ++ + + A D LT LPN Sbjct: 341 LKL---SGNDYYITLSPIEENGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRT 397 Query: 339 ALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + + + +D + ++ G + ++++ L+ +++ Sbjct: 398 LFHEKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKE 457 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E + L+G + + S I ++ + + + + Sbjct: 458 DSVSRLGGDEFAIFLTGVTHRE-AGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDD 516 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + ++ LL + E + K++ L +R ALD+ L+ Sbjct: 517 GDDIEALLKHADAAMYLAKEQGKN-NYQFFSEELHQVLAKKLQLERELRKALDEKQFTLH 575 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ D G++ P +F+P+ + L V+ + + Sbjct: 576 YQPKIHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTK 635 Query: 565 THPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ +Q N+ I + + ++PQ + LEITE A N + + Sbjct: 636 AWQEAGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYT 694 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +L G I+IDDFGTGY++ L + D +KID F++++ N + I+++I Sbjct: 695 IRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTI 752 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A ++V+AE VET + L + +QGY +P P + Sbjct: 753 IHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKE 798 Score = 76.9 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 12/166 (7%), Positives = 35/166 (21%), Gaps = 6/166 (3%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + + L F + + + I + + + + S +A Sbjct: 93 YWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLMEESLAKTMKDLHDIKNALDESSIVAIT 152 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 ++ + I+ Y V + F + + + Sbjct: 153 DDKGVITYVNDKFCEISRYEVDELVGNTHRVINSRYHSKSFFKLMWETIKQGRVWKGEVK 212 Query: 281 FLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 TEY + + + + + Sbjct: 213 NRAKDGTEYWMNTTIVPFLDDRGVPYQYVSIRTDITDRIEAETALA 258 Score = 66.5 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 10/102 (9%), Positives = 27/102 (26%), Gaps = 6/102 (5%) Query: 228 LLLCTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 ++ + ++ + R F +L +S + Sbjct: 29 IITYVNHNFCQLSKFNREELIGKSHNIVDSGFHPRNYFKSLWDTISRGKVWKGEMKNRGK 88 Query: 285 VETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 TEY L+ L ++ S + + + + + Sbjct: 89 DGTEYWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLMEESLA 130 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 728 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 103/567 (18%), Positives = 199/567 (35%), Gaps = 28/567 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 Y + R + + R+ + + T ++ I GY Sbjct: 458 LYSIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQ------GVITSVNPAFCTITGY 511 Query: 243 LVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 L F + ++ + Y + + Sbjct: 512 LAAEVIGRKSSMFKPERHEATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAVR 571 Query: 300 SFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + QA DPLT L N L+ Sbjct: 572 DTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHGC 631 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 L +D ++++ G + + + R L +++ + + +L G E +V+ Sbjct: 632 KVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHDL 691 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 L + + L + F + + +Q LL ++ Sbjct: 692 ADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYKA 751 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 A + +V L +R A++Q L+ QPI + G + + Sbjct: 752 KQAGKNRA-QPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEAL 810 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 + + G+++P +F+P+ + L VL +++ R ++N+ Sbjct: 811 IRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSG 870 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + + + L + + +++ EITE +E+ + + + G A+DD Sbjct: 871 VQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDD 930 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG+++ LKR DI+KID FV+D + DA +V +I ++A + L V AE VE+ Sbjct: 931 FGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVES 990 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q+ L LG YLQGYLIG+P Sbjct: 991 AEQREFLRALGCDYLQGYLIGKPLAAD 1017 Score = 92.7 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 13/220 (5%), Positives = 49/220 (22%), Gaps = 14/220 (6%) Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 R + + + + + L + L ++ ++ + Sbjct: 11 RRPLVVGIVVFLVAAMVSGVLVLGLGHPGDNLGLSLNAAVVLLFSLLLGGLANQMAQLRA 70 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF---TLSWLAALSVLLLLL---- 230 L + + R + + E++ T + S+++ Sbjct: 71 HRADLQRLVAARSAEVRAREAELDRAQSVAHVGEQQLRKLSTAIECSPASIVITDRSGTI 130 Query: 231 -CTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + GY + + + ++ + ++ Sbjct: 131 EYVNPQFERSTGYTAQEVVGKNPRILKSGNRSADEYAAMWATITHGHVWRGEFENVRKDG 190 Query: 287 TEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWH 323 Y +A + + + + R Sbjct: 191 AHYWERASIAPIRADDGMISGFVAVKEDITLQKRAERELR 230 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/254 (10%), Positives = 54/254 (21%), Gaps = 18/254 (7%) Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 + L FVV I + R + L + +K Sbjct: 233 EMKLAALIASLPDLMFVVDQNRCIAEFHAPDPGLLLTPPECFLGRPYARTLPPAVVVKLD 292 Query: 140 MYLVGSFFDFPL-KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 L ++ +S + F L R + Sbjct: 293 EALEEISATGGAKQVEYTLDLPRGRHHFSASVSRLAGSGLVPEGFIVLVRDLTERV---- 348 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGY-LVPVFFIIF 251 R + E R L + + +L++ ++ + GY V + + Sbjct: 349 ---RMEQALIESELRYRELFANSRVVMLVIDPVDGRIVEANAKACEYYGYDPVSLTRMKI 405 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVR 310 R P + + + + L +VR Sbjct: 406 EDINVPGREPLRFEMVQARKPDTFR--CCHRLAGGQLRDVEVASSPIEIAGRKLLYSIVR 463 Query: 311 IYHRSEWLNRRWHL 324 + R Sbjct: 464 DVTERKRFEERMRQ 477 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 727 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 92/592 (15%), Positives = 200/592 (33%), Gaps = 38/592 (6%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + + L + + + A+ + A Sbjct: 675 LLHIHALGIVSRDSRGVPSQMVGTLQDVTRRKMAEEGLVLA-----------KMIFDNAG 723 Query: 223 LSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCL 274 ++++ + I GY + + + + Sbjct: 724 EAIVITDAQGDITDVNPAYQRIMGYTRDEIVGQNPSILKSGRHDEQFYEQMWNEMLSEGH 783 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + + + + + + + + + A DPL Sbjct: 784 WQGEIWDRRKSGEIFPKWLTIDAIRDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPL 843 Query: 332 TLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN EQ + +D ++++ G + + + Sbjct: 844 TELPNRALFRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRI 903 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 ++ ++ + +L G E ++L G E + + + + +G Sbjct: 904 KHHLRTSDTVARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIG 963 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + E + L ++ ++ +++ L +R A++ Sbjct: 964 IAMHPDDGEDYETLTKHADTAMYRAKEEGRG-TYKFFTSDMNEINGRRLSLERALRQAVE 1022 Query: 501 QGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 L L+ QP + G + ++ + G+++P F+P+ + L V++ Sbjct: 1023 CNQLTLHYQPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQ 1082 Query: 558 SLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + ++NL + ++ R ++ ++P+ + +EITE A Sbjct: 1083 QACMDAKRLARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLA 1142 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + ++ I +L G +++IDDFGTGY++ LK+L + +KID F++D+ ++ D Sbjct: 1143 MGDVNRTIEQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDD 1202 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV SI +A A LSVVAE VE Q Q L + +QGY +P P Sbjct: 1203 TAIVSSILSMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFE 1254 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 727 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 130/766 (16%), Positives = 272/766 (35%), Gaps = 56/766 (7%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW 61 V + I+ + F + ++ H + L+ +P + + W Sbjct: 58 VVAGAFSLGLGIWAMHFIGMLAF-----HLNDDVTYHLGIVLLSIVP---AVVASGLAFW 109 Query: 62 RGVVP------VLCGMFCTNLWNFHLSFLQTAVMLGSQTF----VVLCACAILRWQLGTR 111 P ++ G F ++ + ++ M + V+ A AI+ + Sbjct: 110 IISHPETRPIQLVFGAFLISVGVVSMHYIGMEAMQMNAILTYDPVMWVASAIVAFVASLV 169 Query: 112 WRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS 171 Y L R W L + + I ++ + T A + + S Sbjct: 170 GLYILFYIPNVSRFHWRRLASSVLIGVAVS-GMHYVGMGAARFTPMEGAAKPVSDYAVDS 228 Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-- 229 A +I + M +S A + A S E + ++ A+ ++++ Sbjct: 229 TLLAYVIAASVMTLFILMYISLRTA----SQLEAQSEELELKFESIIESASDAIIVADHN 284 Query: 230 ------------LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 L ++ + +V + F + + + Sbjct: 285 RTILQWNQGATDLFGYTTDEMVGQSIVAIIPERFREAHERGMRRYEATGE--KRVIGQTV 342 Query: 278 NQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 L+ E + L + ++R + + + + DPLT LPN Sbjct: 343 ELIGLRKDGVEVPIEMSLGTWKTDKGIFFSSIIRDISERKRIEAQINDLVYLDPLTGLPN 402 Query: 337 FRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 R + Q + + +DN + ++ +G + ++ + + +Q+ Sbjct: 403 RRLFSDRLDALLGQSQSEQFALYYIDLDNFKVINDRFGHSIGDQFLKQVTTRIQSTIQKT 462 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGN 447 + L +L G E +++ ++ H L + N + G + Sbjct: 463 DTLARLGGDEFIILSPDTKS-NLAAHRAQELINVLHPPFELENEEVFTGASIGISLHPSD 521 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 +T + L+ ++ A ++ +++ L +R + +G+ ++ Sbjct: 522 GDTAEELIKNADIAMYRAKADGKN-GYQFFTNELNESVSRRSNLSMALRKGIGRGEFTVH 580 Query: 508 AQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP E G + ++ + G+++P +F+P+ + R VL + Sbjct: 581 YQPQIQLETEMVIGMEALVRWNHPELGMISPGEFIPIAEETGSIHRLGEFVLNEACRQNK 640 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 R +VN+ + QK++ + R + Q + LE+TE +A+ + Sbjct: 641 AWQDASIPPFRVAVNISAVQFAQKDLPEVVSRALAASGLEAQYLELELTESV-IQSADRA 699 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +L G ++IDDFGTGY++ LK D +KID F K+I ++ DA +V++I Sbjct: 700 IETMHELVALGVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTKNIESDEKDAALVKTI 759 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L+V+AE VET+ Q A L QGY RP P + Sbjct: 760 IRMAHELDLNVIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAEE 805 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 727 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 110/572 (19%), Positives = 216/572 (37%), Gaps = 34/572 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 +TR + + A+ R +E T + + +L I GY Sbjct: 439 LLGITRDVTASMHAKQQLRIAATAFESQEGMLVTDA-------VGAILRVNQAFTRITGY 491 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 Y + + + + Y + + Sbjct: 492 TADEVIGKNPRILNSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVK 551 Query: 300 SFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 + + S+ A DPLT LPN R L+ +Q Sbjct: 552 DAGGNVVNYVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGK 611 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +DN + ++ G + + + L ++E + + ++ G E +++L Sbjct: 612 SGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDL 671 Query: 409 ET-----EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + + + + + + D F+ N ++ LL Q Sbjct: 672 SDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADI 731 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEG 518 Q+ + + + + ++ L +R A+++ LY Q + G Sbjct: 732 AMYQAKKAGRN-TMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPLG 790 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFS 576 + +L + + G+M P +F+P+ + L VLE+ L D + S Sbjct: 791 AEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLS 850 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +N+ Q + ++ Y I P + LE+TE N ++++ + L K G Sbjct: 851 INVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVG 910 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++DDFGTGY++ + LKRL D +KID F+++I +++ D IV +I +A++ + V+A Sbjct: 911 FSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIA 970 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET++Q+ LL + G + QGYL +P P+ Sbjct: 971 EGVETEEQRQLLLRKGCNHFQGYLFSKPVPVE 1002 Score = 48.4 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 25/217 (11%), Positives = 53/217 (24%), Gaps = 18/217 (8%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 RLF ++ + + L + P+ A L L ++ Sbjct: 250 RLFQWRRLSDAPVVVVLGLSETALLKPVDAIIHKNRWQAGIATALLWLLTLGAILLLQRL 309 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 ++IV + EKR T+ + ++ E + Sbjct: 310 SSQQKLIVRHAQ---RLQATSNDLQESEKRLRTIFETEPECIKVVDR--NGELVEMNQAG 364 Query: 244 VPVFFIIFTLGVGK----------LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + + + + FL L V T + L Sbjct: 365 LAMLEAATLEEARQKKLIDYVAPEDQAAFLALHRRVMNGESAVLEFKITGLKGTLHHLET 424 Query: 294 ILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQAL 327 + + + L + R S ++ + A Sbjct: 425 HATPMPDANGNISLLLGITRDVTASMHAKQQLRIAAT 461 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 121/590 (20%), Positives = 222/590 (37%), Gaps = 29/590 (4%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 D V L L ++ I + + Sbjct: 638 DGQLVAVRLNGSLVTAANGEQLILFIVEDITEQERTVARVNLLAQVFQQSGEGITIMDAN 697 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 +++ I GY F R + A+ Sbjct: 698 D------IIVDVNSAFTQITGYSRDEIIGKNCRFLEAERTDRSIDAQVRAALEQTGFWQG 751 Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 ++ +++++ + + + R H A D LTLL Sbjct: 752 EVWDRHKEGFDFPKWLMMSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLL 811 Query: 335 PNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN +L+ E + + + +D+ + ++ G + + + R L + Sbjct: 812 PNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNI 871 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGR 443 M ++ + +L G E ++VLS + R+ + L ++ +N L Sbjct: 872 MGNDDIVARLGGDEFVVVLSDTDH-DRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISL 930 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F + ++++ L+ ++ A ++ T++ + +R A+ + Sbjct: 931 FPTDGDSVEALMKNADMAMYRAKAAGRN-NYQFFTAAMNTLVTERQQIETGLRQAIACNE 989 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LLLY QP + + G + ++ + G++ PD+F+P+ + ++ VLE+ L Sbjct: 990 LLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENAL 1049 Query: 561 KWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 LA G R +VNL L + I II + ++ + A+ LEITE A Sbjct: 1050 AQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQY 1109 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 E + + +L + G +AIDDFGTGY++ LK L D +K+D FVKDI ++ DA I Sbjct: 1110 PEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAI 1169 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +A L+VVAE VE + Q LL +G +QGY +P D Sbjct: 1170 SAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 Score = 61.9 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 21/210 (10%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF---YYLTRMIVSPH 194 + S+ GD ++ ++ LL+ T ++ M R+ Sbjct: 472 LMLADRHWHIVIYESYSSLMGDTFSLSLLMLLLAFITCAVVGGMTLVSSGERHRIAEKVA 531 Query: 195 FAQILWRRDIAP-------SLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIAG 241 + ++IA + E+R TL A + L L I G Sbjct: 532 EKTMALSKEIARSQTFQATLMESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITG 591 Query: 242 YLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + I + +RY L T Y +++ ++ +++ Sbjct: 592 YTLEELQAIDPWELTPIRYQSSETEQLERLKQTRRYGPYQKHYRHKDGQLVAVRLNGSLV 651 Query: 299 ISFSVC--LLYMVRIYHRSEWLNRRWHLQA 326 + + +L++V E R +L A Sbjct: 652 TAANGEQLILFIVEDITEQERTVARVNLLA 681 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 103/568 (18%), Positives = 211/568 (37%), Gaps = 33/568 (5%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-------------PYENDFI 239 + + + + +V+ + I Sbjct: 278 IRHLKKKISKAYRELRKQHEWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLGLSEEEI 337 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 G + K+ + ++ L + + + + +A + Sbjct: 338 LGKKLDKLLSGLVDKREKVYKIPIEEVVNRGSMIKLETDLSLVTPGGRRL-VEGTVAPIR 396 Query: 300 SFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + S ++ V + + + + DPLT LPN Sbjct: 397 NDSDVIIGTVVALKDITEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNE 456 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +DN + ++ G + ++ + + ++E + + ++ G E +++ Sbjct: 457 MCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQI 516 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + + + G + E Q + ++ Sbjct: 517 KDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRA 576 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 E ++ + +++ + N++R A+++ + +L+ QP + + G++ + Sbjct: 577 KELGRN-NYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEAL 635 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMP 581 L D G+M P +F+P+ L VLE+ + P SVNL Sbjct: 636 LRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSA 695 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + NI I R+ ++P+ + LEITE A + ++ + QL K G R+++DD Sbjct: 696 RQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDD 755 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L++L D +KID FV+DI N+ + I +++ LA L+VVAE VET Sbjct: 756 FGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVET 815 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q L K QGYL +P P + Sbjct: 816 KEQLLFLKKEKCDKAQGYLFSKPLPAEE 843 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 103/562 (18%), Positives = 202/562 (35%), Gaps = 28/562 (4%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFF- 248 + K+A + V++ L I GY Sbjct: 550 ALLTALAVQKVYAAESLKQAAAVFESTREGVVITDLQPRIVAINRAYAEITGYSEEQVLG 609 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSV 303 + + + +++ + Y ++ + + Sbjct: 610 KNPRIIKSGRHDKLFYQAMWASLTKAGYWRGEVWNRRRSGDIYPQWLTISTVFNDRNEPC 669 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + + + R A D LT LPN ++ + L Sbjct: 670 NYVGVFTDITQIKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYL 729 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + L ++E + L +L G E L+VL + Sbjct: 730 DLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPA 789 Query: 416 HMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + L + + + + F + ++ L+ + Sbjct: 790 MVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRN 849 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + +S ++++L +R AL G+ +L+ QP+ + + G + ++ Sbjct: 850 -TYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPP 908 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQK 587 D +++P KF+P+ + L VL + +VNL + Sbjct: 909 DKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSE 968 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ I ++ + + + LE+TE +AE S+ ++ L G R++IDDFGTGY+ Sbjct: 969 NLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYS 1028 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR D +KID FV + + D I +I +A+ L V+AE VE++QQ + Sbjct: 1029 SLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDI 1088 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L++ G Y QGYL RP P + Sbjct: 1089 LNQHGCDYYQGYLFHRPVPAQE 1110 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/195 (11%), Positives = 42/195 (21%), Gaps = 16/195 (8%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 L I I L L + + Y T I+ Q R+ Sbjct: 215 LPIVLVTDQGSEIAVARALHMGVDDYLTKHAGYLYETTAILEKVQHQAELARERISLKKT 274 Query: 211 EKRAFTLSWLAA--------LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 R L + + L+ + + GY + Sbjct: 275 SLRLSDLLAASPTILYNLRVVGTTFQLVWVSENIERLLGYTQEEVMAEGWWNLHVHPDDR 334 Query: 263 LNLTW---AVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSE 316 + + L Y+ L + L ++ + ++ + Sbjct: 335 EAALTHQSELLAVGQLTYDYRLLHRNGQSVWIHDELRLVRSINGKPLEVVGAWLDVSEHK 394 Query: 317 WLNRRWHLQALTDPL 331 QA L Sbjct: 395 RTE--LIRQAHQSAL 407 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 101/624 (16%), Positives = 204/624 (32%), Gaps = 31/624 (4%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV-SPH 194 + F + L R Sbjct: 107 VFLMRVAAMGRFIETQNAHREAEAHARQKELQAAEQLRRIEEQARQQLEQRVRERTLELT 166 Query: 195 FAQILWRRDIAPSLGKEKRAFTL---SWLAALSVLLL-----LLCTPYENDFIAGYLVPV 246 + ++A + E + + +++L +L I G+ Sbjct: 167 QSNERLSNEVAVRMRAESGLRLIHKVFENTSEAIILTDPQGMILDINPAFTEITGFSREE 226 Query: 247 FF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---S 300 + N+ ++ + Y + + Sbjct: 227 ALGHNPRSFKSDRHDATFYTNMWRKIAEEGFWQGEIWDRRKNGEIYPKRLTINAVRNQAG 286 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + + S+ + A D LT LPN + Sbjct: 287 EVENYIGIFSDISESKATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAV 346 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D + ++ G ++ + + L ++ + + ++ G E ++L+ Sbjct: 347 FFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILADISDNE 406 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + I + +G + N ++ L ++ Sbjct: 407 SVARVARKVLEELQKSISIKGHDIFVGASIGIALYPDNGNDVETLTKNADMAMYRAKESG 466 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARL 526 E ++ T++++ L + + A++ L +Y QP N + G + ++ Sbjct: 467 RG-NYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYYQPKLNMQSGIMVGMEALVRWP 525 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLL 585 + DG ++ P +F+P+ + L V+ + A R +VNL Sbjct: 526 QADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRETGMNLRVAVNLSAREFQ 585 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + I + + + +EITE + E+++ +EQ+ + G IA+DDFGTG Sbjct: 586 SPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAIATLEQISRLGIHIAMDDFGTG 645 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK+ +K+D FVKDI + D IV +I LAK +L VVAE VETQ+Q Sbjct: 646 YSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKVLNLKVVAEGVETQEQL 705 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 + L + QGY +P D Sbjct: 706 SFLRQNLCDECQGYSFSKPLSAVD 729 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 124/717 (17%), Positives = 244/717 (34%), Gaps = 44/717 (6%) Query: 38 HSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVV 97 + I + + L +F W + + G+ + S + Sbjct: 344 LAGKISATGLITLLALLSAVLFSWW-LNRWIKGLIAHYHRDLEHSLEELGERSRDLQLSR 402 Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF 157 L G + + L S PL T Sbjct: 403 FMTDHASDVVLLLDEDGAPRYLNAAAAALLGDDPAQRGPRLAALLPPSDQPLPLTYETVL 462 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 D ++ + + R + + ++ K + Sbjct: 463 DDVPFEVSLTSMQ-----------YQDHAYRSLRARDMSRRQQAEQQQRLAAK------I 505 Query: 218 SWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAV 269 ++ ++++ ++ I GY + + + + Sbjct: 506 FDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPSLLSSGRQPPAFYQKMWQQL 565 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQA 326 + + T Y +++L + + + + A Sbjct: 566 AQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHIRHMA 625 Query: 327 LTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN + Q + + L +D+ + ++ G ++ Sbjct: 626 EHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQ 685 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDM 435 + + L ++ ++ + + G E +L++ + + L R + L + Sbjct: 686 VAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQALAI 745 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 F N LQ LL + A ++ Q +++ L N + Sbjct: 746 STSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNR-YQFFTPELNAQVAERLTLENHL 804 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL++ L L QP N+ G + +L + G+++P +F+PL + L Sbjct: 805 RQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIG 864 Query: 553 LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL+ + A R +VN+ L Q ++ + R+ + + LE+T Sbjct: 865 RWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVT 924 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E +AE ++ +++ + G +A+DDFGTGY++ LKR D+IKID FV ++ Sbjct: 925 ESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPD 984 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 N DA IV +I LA+A + +AE VE+++Q L + G +QGYL GRPQ + Sbjct: 985 NRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGE 1041 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 98/565 (17%), Positives = 196/565 (34%), Gaps = 31/565 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLV 244 + + + K + +++ + + I GY Sbjct: 141 LQNRVQFLYKMMVAERQLMLTAK----VFENTTEGIVVTDSTACITNVNPSFEAITGYDR 196 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 I R + + + T + Y ++ + Sbjct: 197 GSVLGQNISILQSGRHDRRFYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTG 256 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 + + + R + + D LT LPN Q + Sbjct: 257 DGQTESYVGVFTDLTRIKESEENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIV 316 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G + + + L + L +L G E +VL Sbjct: 317 AVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKATLARLGGDEFGIVLPNMTQ 376 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + ++ I + +G + + E L+ + Sbjct: 377 NRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQ 436 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 ++ + ++LL + +R A+D+ + LL+ QP + G + ++ Sbjct: 437 SGRN-NFQFYRSELNTASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIR 495 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLT 583 + G+++P +F+PL + L L+ + R SVNL + Sbjct: 496 WQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQ 555 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + ++R + P + LE+TE A + E ++ + L +FG +AIDDFG Sbjct: 556 FRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFG 615 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TG+++ LK+ D +KID FV++ + DA I+R+ +LA + +L V+AE VE + Sbjct: 616 TGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLE 675 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q L + +QGY GRP Sbjct: 676 QLEFLAQESCDEIQGYFYGRPLSGD 700 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 98/613 (15%), Positives = 215/613 (35%), Gaps = 28/613 (4%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 + G + ++ + + ++ + I + Sbjct: 347 ALLAAGGDASRWVKLEFRLCLGSEEPRWFECCVLPIKDDHAEVVQYHGVLHDITERRKGE 406 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLG 254 R + L + + + I GY + Sbjct: 407 HDLRLAQVLFRTTNE---ALMISSRDN---KIEMVNPAFSRITGYQLDEVLGKGPDLLQS 460 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRI 311 + + A+ + Y +A + +V + Sbjct: 461 GRHDAPFYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIATVTNDKGETVQYVAAFSD 520 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + QA D LT LPN + + +D +F+ Sbjct: 521 ITKRKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRSQRSGQQVALLFIDLDRFKFV 580 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + G + +R + L ++E++ + +L G E ++L + + + Sbjct: 581 NDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTVILPELHGPEGVARLAQGMID 640 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + L + + + + + L+ ++ + + Sbjct: 641 KLEERYCIQDHELFISASIGITIYPEDADNMMDLVKNADVAMYRAKENGRG-SFCFYTAE 699 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 ++ + + +R AL++G ++ QP + G + ++ G I+ PD+ Sbjct: 700 MNADARQLHKIEQALRVALEEGQFWIHYQPYVQQSSGLITGVEALIRWRNSAGEIVYPDQ 759 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + L L VL S++ +A + FSVN+ + ++ G+I Sbjct: 760 FIPVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDITFSVNVSARQFQEGHLVGQIKAA 819 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + I+PQ+++LEITE + E ++ ++++ G R+A+DDFGTGY++ LK+ Sbjct: 820 LQENQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGVRVALDDFGTGYSSLGYLKQFP 879 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D++KID F+ I + D +V +I +A + + V+ E +E QQ ++ Y+ Sbjct: 880 IDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGEGIENDQQLQRVNLHACDYV 939 Query: 717 QGYLIGRPQPLAD 729 QG+ RP P + Sbjct: 940 QGFFYSRPMPYDE 952 Score = 55.7 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 17/238 (7%), Positives = 44/238 (18%), Gaps = 6/238 (2%) Query: 92 SQTFVVLCACAILR---WQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFD 148 + + I + + + L + IG + L + Sbjct: 173 FAPWGWMVGSGIYVDDVEHIFQDAASAFMAVILTALLVVWAISVKIGRSITRPLFQTRQA 232 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 + +L L A+ ++ F + + + Sbjct: 233 MLRLANGDLDVPLEDMDRSELGDLSQALRVFRDQFAINEGLRLEREESLKQAAEKREELA 292 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 + + T+ L I + + + L L Sbjct: 293 RIIEISHTVVLSWENDEEWSLSYVSENCYRILQSGLKSLVLKPLVNPEDLPQMEALLAAG 352 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWH 323 + G E + + V ++ Sbjct: 353 GDASRWVKLEFRLCLGSEEPRWFECCVLPIKDDHAEVVQYHGVLHDITERRKGEHDLR 410 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 120/695 (17%), Positives = 233/695 (33%), Gaps = 31/695 (4%) Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 F+ R V+ + + VM S+T + + Sbjct: 169 FLVAARPVLTSKYAGPVRGVLVLGRLLDKEEVMRLSETIHIPLEIHTADDATLPPDFAAV 228 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 L I + + L + + + T Sbjct: 229 RGELAQGAPVVLRRADSKMIAGYAAIPDIYGKPALLLRVDAPRSIYQEGKKAVTYFLTWF 288 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLL 230 + + F ++ + + E+R + ++LL ++ Sbjct: 289 AVVGVCFAFIINLFWRR------LLESLQQGRRSEERNRLVVERTNQAILLLEPGAGTII 342 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + G+ + L P + + + E Sbjct: 343 DANPATCVLLGFSRNELTGADIHAL--LSGPVQEVDSELERCLRETRELSLCHRDGAELV 400 Query: 291 LAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 + + + L M QA D LT LPN LE Sbjct: 401 VEAMATQVPHGDDQALCLMFHDITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVA 460 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +DN + ++ G +RS+ + ++ + +L G E Sbjct: 461 GARRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEF 520 Query: 402 LLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++VL+ + L + + + F + +T++ L+ + Sbjct: 521 VIVLTNLTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKA 580 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 + E ++ + ++ + +R AL++G++LL+ QP Sbjct: 581 DTAMYHIKESGRN-SFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGA 639 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PR 574 G + ++ D G+++P F+P+ L VL + R Sbjct: 640 VVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLR 699 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN+ + + R++R+ ++ +SP V LE+TE N + ++ + +L + G Sbjct: 700 VSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERG 759 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 I+IDDFGTGY++ LKR D++KID F+ D+V DA IV +I +A + V Sbjct: 760 ITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKV 819 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET +Q LL + + +QG+ RP P + Sbjct: 820 VAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEE 854 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 725 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 110/615 (17%), Positives = 211/615 (34%), Gaps = 29/615 (4%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH--FAQIL 199 + + L IS + ++ + + ++ Sbjct: 508 IDMAARIVNLAISKNQPFKLQHRDITPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNITG 567 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVG 256 + T + ++ I GY Sbjct: 568 RKLKEEQLRVAAAAFETHEAIMITDAHGTIIKVNQAFQRITGYSQEEVLGENPRILSAGR 627 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + + + ++TL + Y + + + + + Sbjct: 628 NEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYVAIFSDIT 687 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + A D LT LPN R L + L +D + ++ Sbjct: 688 QRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDRFKTLND 747 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNI 420 G + + + ++E + + +L G E ++++ +T + + Sbjct: 748 TMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRAEETSKHIAAIAEK 807 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + S + G +E+ LL Q+ A+ Sbjct: 808 IRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRN-AVRFF 866 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTP 535 + ++ +V L N +R AL L LY Q + G + ++ + G+++P Sbjct: 867 DPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAIGAEALVRWIHPIRGMVSP 926 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRI 593 F+P+ + +L VL++ LA +VN+ Q I Sbjct: 927 AHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQVGFVEHI 986 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 L + Y I PQ + LE+TE ++ + + L G R+++DDFGTGY++ LK Sbjct: 987 AELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSSLSYLK 1046 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L D +KID FV++I T+ DA++V++I +A+ L+V+AE VET+ Q A L + G Sbjct: 1047 NLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFLKQNGC 1106 Query: 714 QYLQGYLIGRPQPLA 728 QGY G+P P+ Sbjct: 1107 MCYQGYYFGKPAPIE 1121 Score = 65.8 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 8/177 (4%), Positives = 29/177 (16%), Gaps = 9/177 (5%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 + + + ++ + I + S Sbjct: 281 VVMGVYRPSKRDRVWLLVSAAPQLNPNNEVEQVVCTFVDITERKKMEERLELTQFASDYA 340 Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI--IFTLGVGKLRYPFLNLTWA 268 ++ A + G+ I L +L Sbjct: 341 PDCILWVNEQAR------ICYANEAALHCHGFSKEELLSMTIHDLDPDFPPDVWLAHWHE 394 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHL 324 + + + + + + + + R + Sbjct: 395 LQHKGGITIETRHRRRDGSIFPIEVSANFVKFGDKEYNIAYHRDITERKKSEAALRY 451 Score = 61.1 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 13/141 (9%), Positives = 31/141 (21%), Gaps = 11/141 (7%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFF 248 H ++ A E+R +S + + + + Y + + GY Sbjct: 436 HRDITERKKSEAALRYSEQRLRDVSEASGEYLWEIDINLGYTYVSNRSIEVKGYTPEQLL 495 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + + A+S + + L Sbjct: 496 GHAPAEFMPPEDIDMAARIVNLAISKNQPFKLQHRDITPSGAILWEEVSGVPFYDDAGHL 555 Query: 306 L---YMVRIYHRSEWLNRRWH 323 L R + + Sbjct: 556 LGLRGTGRNITGRKLKEEQLR 576 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 11/153 (7%), Positives = 36/153 (23%), Gaps = 12/153 (7%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS-------WLAALSVLLLLLCTPYE 235 + + R I A+ + + + + + + L L E Sbjct: 179 VFGIARDITERKRAEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSE 238 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ--NFLQGVETEYSLAF 293 + + + + +++T L++ + L Sbjct: 239 AQLLGKSSFDPDWNVIHEDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRPSKRDRVWLLV 298 Query: 294 ILAVLIS---FSVCLLYMVRIYHRSEWLNRRWH 323 A ++ ++ + + R Sbjct: 299 SAAPQLNPNNEVEQVVCTFVDITERKKMEERLE 331 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/132 (10%), Positives = 28/132 (21%), Gaps = 15/132 (11%) Query: 211 EKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFII---FTLGVGKLRYPF 262 E R TL V L + L + + G + + Sbjct: 73 EARLRTLFNTIKDLVWLKAPDGVYLACNPVVERMLGTAEAAIVGRTDYDFISREQADSFR 132 Query: 263 LNLTWAVSTLCLLNYNQNFLQGV-ETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWL 318 + A++T + + + L+ + R + Sbjct: 133 EHDRAAMNTGTVCINEGWLTFKDTGYCGLFETSKTPVYDDTGQLIGVFGIARDITERKRA 192 Query: 319 NRRW---HLQAL 327 QA Sbjct: 193 EAALKNSEQQAR 204 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 725 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 104/600 (17%), Positives = 221/600 (36%), Gaps = 25/600 (4%) Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 + G+ I V+D ++ + +L + R+ + Q + + Sbjct: 443 GAPLVAPSGETIGIIAVMDKKAMDIEEWVKPVLGLFANRVALELQR-QSTHKEMEMAASV 501 Query: 210 KEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLT 266 ++ A + + +L I GY ++ N Sbjct: 502 FKESAEAIVICDSED---KILRVNPAFYKITGYSQIEVVGQSPQLLQSDRPIQSMLHNRE 558 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 A+ + + + + + + + ++Y+ + + Sbjct: 559 AALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITERKLFEEHIY 618 Query: 324 LQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT LPN A E+A + + + +D+ + ++ G + Sbjct: 619 NLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDLL 678 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTG 432 ++ + +++ + + + G E ++LS T+ + L + ++ Sbjct: 679 LQQVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSE 738 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + G F N +++ L+ ++ + ++ +++ L Sbjct: 739 VVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRN-CFQFYTKEMNQYAQERLELE 797 Query: 493 NTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R AL++ + +L+ QP + G + ++ D G+++P +F+ + L Sbjct: 798 LDLRKALERDEFVLHYQPQFDPNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVP 857 Query: 551 FDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 V+++ SVNL L ++ + I+P + L Sbjct: 858 IGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLEL 917 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE N E ++ + + G ++IDDFGTGY++ LKR + +KID FV+ Sbjct: 918 ELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRG 977 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + D IV+SI +A A +L+V+AE VET +Q L + QGY RP AD Sbjct: 978 LPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAAD 1037 Score = 70.4 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 59/178 (33%), Gaps = 7/178 (3%) Query: 7 LIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVP 66 L +++ L TL+ V LS + + + W P + +S + IFG+R Sbjct: 6 LKHHLRYLALCATLSFVYY-LSGRLGLSLAFEQAGVSPVWPPTGIAISAVLIFGFRVWPG 64 Query: 67 VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 ++ G NL + LG+ ++ ++R + T Sbjct: 65 IMLGALLVNLSIALPFSAAILIALGNTLEAIVAGYLLIRCAERYPF----TQVNHTAWFI 120 Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + ++ P+ + S + G + + + D++ V + F Sbjct: 121 AIAVMAPMFSATIGLVSLSMHNLIEASE--LGIVWSTWWLGDIVGALVIVPLLLTWFR 176 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 127/764 (16%), Positives = 259/764 (33%), Gaps = 76/764 (9%) Query: 7 LIKNIKIFTL---AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRG 63 L I L L + +S +A + + F+ ++ L+ ++ G Sbjct: 74 LAMAIGQKALMVDPRHLHAFFPPVEHVLSGVATVIVAAAFMRYLTGDFFLARNYL-GIGI 132 Query: 64 VVPVLCGMFCTNLWN----------FHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 + + C + + W F ++ + +V + R + G Sbjct: 133 TLTLSCYIATFSWWADYITTNPASKFGQTWCDVLFHTIAALLLVFPTWHLFRHRTGWLRN 192 Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 I ++ L + + IFT + Sbjct: 193 I---------------------ICFALVCFFLTETLKLVDIAYGERYEYIFTPIRRSFNL 231 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 + + ++ + RR A + EKR TL + + L + Sbjct: 232 IGIYVLGYVY---------IREQESRRRRATAKVVESEKRYRTLVENVNMGISL--IDGN 280 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLN----------LTWAVSTLCLLNYNQNFLQ 283 GYL +F G+ Y A++T ++ + Sbjct: 281 NRIVMNNGYLEKMFRKNAEKLTGRFCYQEFENRDECCDNCLGVEAMTTGRAVSREVERIL 340 Query: 284 GVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 L + + + +V + + A D LT LPN + Sbjct: 341 DDGEPSGLRLSAFPVFNEQGKATKFIKVVEDITDRKRAEEKIRRLAYYDSLTGLPNRPLM 400 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + L +D + ++ G + ++ + L +E++ Sbjct: 401 MDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAARLSGCTRESDT 460 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 L +L G E +++ G + + + + + L + F + Sbjct: 461 LARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIGIVLFPSDGG 520 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL + + + ++ + ++ L +R AL G+ L Q Sbjct: 521 NGEMLLQRADMAMYAAKDRGGN-SYRFFSAEMNTRAVERHELEEDMRQALTNGEFFLMYQ 579 Query: 510 PIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P N + G + ++ G++ P +F+P+ + ++ VLE + A Sbjct: 580 PQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEACRQGAQW 639 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 D + VNL + I G + + ++ + + + +E+TE ++E+++ Sbjct: 640 QHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLM-DSETAVS 698 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + QL G R+AIDDFGTGY+++ LK D IKID F++DI + + I+ +I Sbjct: 699 TLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVA 758 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A++ V+AE VET++Q L + +QG+ RP D Sbjct: 759 VARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLPDD 802 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 107/584 (18%), Positives = 206/584 (35%), Gaps = 25/584 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 TV+ + L + I + RR E+ + + W+ Sbjct: 175 RTVLYTSLPLKSENGAITGAMALVQDITEKRKTDEVLRRFR---FSIEQASEAIFWINDE 231 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL--RYPFLNLTWAVSTLCLLNYNQNF 281 L + GY + + + + + + Sbjct: 232 GRFLF---VNDQACHSLGYSASELESLHLWDIDPDFPAERWAEQWERMKSDPKQVFETRH 288 Query: 282 LQGVETEYSLAFILAV-LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + + + + L + + VR + + Q+ D LT L N L Sbjct: 289 QRKDGRIFPVEVSASQCLFNNEENHVAFVRDITIRKKYEKELEHQSNHDALTGLANRVLL 348 Query: 341 EQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + +Q + L +D + ++ G + ++ L + + Sbjct: 349 DDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGDT 408 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQE 449 L +L G E +V++ + M + + N L + + + E Sbjct: 409 LSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGE 468 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL Q+ E + + K + L +R AL G +L+ Q Sbjct: 469 QSEDLLRHADAAMYQAKKQGGN-GFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQ 527 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + +G + ++ D G+++PD F+PL + L VL + Sbjct: 528 PKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAW 587 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + +VNL LQ + I + + I P + LE+TE + + Sbjct: 588 QAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAK 647 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L + GF +++DDFGTGY++ L+R D +KID F+ D+ ++ A + S+ Sbjct: 648 LLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIG 707 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + + +AE VET++Q A L +QGYL +P P D Sbjct: 708 IAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPAND 751 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 99/578 (17%), Positives = 206/578 (35%), Gaps = 31/578 (5%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL---------LCT 232 + + + K + ++ +++ L + Sbjct: 305 WLCSSHAAMAGRVYENRSLYLQLESRARKLQLYDRAIEESSNGIVICLADKTRDNPVIYA 364 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + GY F L + L + + + + Sbjct: 365 NRAFSIMTGYSHDEIIGLSPRFLLANDLAQPGLERLRNCMRHGGSARAILRNYRKDGSLF 424 Query: 290 SLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 LA + + + + QA D LT LPN L E Sbjct: 425 WNEVALAAVHNEHGEIAHFISVFNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEH 484 Query: 347 E--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + L +D + ++ G + I+ + + +++++ + +L G Sbjct: 485 AITKATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGG 544 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +++ + E + L + ++ N + F + + L Sbjct: 545 DEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELF 604 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 ++ ++ + +++ L ++R A+ L L+ QP + Sbjct: 605 RNADTAMYRAKDVGRN-GFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLA 663 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KK 571 + + ++ G+++P F+P+ + L V+E + LA + Sbjct: 664 SGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQ 723 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R ++N+ L + ++I+ + PQ++ +E+TE + ++ ++ L Sbjct: 724 DIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLR 783 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G R+A+DDFGTGY++ LKR DI+KID FV DI + IV++I +LA + Sbjct: 784 EMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLN 843 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++VVAE VET+ Q L G +QGY +P P + Sbjct: 844 MTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEE 881 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 105/583 (18%), Positives = 211/583 (36%), Gaps = 27/583 (4%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 V + R I +++ ++ + V Sbjct: 439 VWATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTHGIENSAS---AVVITDTQGV 495 Query: 226 LLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + + + G+ + F++L + + Sbjct: 496 ---IEYVNKKFIQLTGFSLEEAVGKNPRILKSEATPPEVFVDLWKTILSGREWRGELLNR 552 Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ L + V + + A DPLT LPN R Sbjct: 553 RKNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYFDPLTDLPNRRM 612 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + + L +D+ + ++ G ++ + ++++++ Sbjct: 613 LQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDD 672 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E L+L + + + L ++ + + + + F + Sbjct: 673 VVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDG 732 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++ L + E ++ + ++ L +R A ++ +L L+ Sbjct: 733 GDVKNLEKHADIALYHAKEEGKN-TFRFYLEELNSTISTRIALEQGLRYAKERQELELHY 791 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + +L D G+++P +F+PL Q L VL + Sbjct: 792 QPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQ 851 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +VNL + L + R+ + I P+ + LE+TE +N + + Sbjct: 852 WREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQ 911 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +E+L G I+IDDFGTGY++ LK I+KID FV+D+ N+ D I RS+ D Sbjct: 912 LLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVD 971 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + VAE VE+++Q +L ++G Y+QG++ RP Sbjct: 972 LANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQAD 1014 Score = 42.6 bits (100), Expect = 0.059, Method: Composition-based stats. Identities = 15/222 (6%), Positives = 43/222 (19%), Gaps = 26/222 (11%) Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + ++G + +S A + + T +I + L Sbjct: 257 LMALSTVQLAVLGMDRPLVIAVSRDLKQLHAGWHKHAVNQAITFSIIVALSISALIGFQG 316 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPV 246 R L ++ + +V ++ + ++G Sbjct: 317 YQREQLAKARAVEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEE 376 Query: 247 FFIIFTL---GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY-------------- 289 + L L + ++ V Sbjct: 377 MLGKGDHEYSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGKG 436 Query: 290 -SLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQAL 327 + L + + + +R + Sbjct: 437 AYVWATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTH 478 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 111/648 (17%), Positives = 219/648 (33%), Gaps = 32/648 (4%) Query: 103 ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI--GIKCSMYLVGSFFDFPLKISTFFGDA 160 + +L + R + + + + + F PL S Sbjct: 94 LTGARLLGQDRAQVIGMPLSGWVPNGAVAQLFHHLRRVLSEPGRVFDHLPLHTSLVRESP 153 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + + + + Sbjct: 154 IRHVRLESIAFTQYGSGRLCRT---ALVDLSDRKREEDRLNLIAQVFERSTDAIMITDS- 209 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 L ++ + GY R + + A+ + Sbjct: 210 -----LNRIVSVNRAFTTVTGYSADEVLGRNPKLLASGRHDRDFYREMWSAIERNGSWSG 264 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + + Y+ + + + S + + + R A DPLTLL Sbjct: 265 EISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIYAEITDQRAAASRIQFLAHYDPLTLL 324 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN L+ + + L +D + ++ G ++ H ++ + + L Sbjct: 325 PNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRLKAS 384 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 ++E++ + + G E +++L ++ + H+ + + I N L++ + Sbjct: 385 VREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVLNVSFSIGISV 444 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F + L+ +S A ++ +++ L N + A+++G+ Sbjct: 445 FPDDAMDPDTLIRNADIAMYRSKASGRNQ-FQFFTADMNAHALERLALENDLHRAVERGE 503 Query: 504 LLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP + G + +L G++TP +F+P+ + L VLE + Sbjct: 504 FRLMFQPQFEGSGSIIGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERACQ 563 Query: 562 WLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + SVN+ L QKN+ I RL +I P + LE+TE + Sbjct: 564 QVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDH 623 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 ++ + +L + G R+AIDDFGTGY++ L+ +KID FV+D+ I Sbjct: 624 VATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAIT 683 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I LAK ++ V+AE VET QQ + L QG+ +P Sbjct: 684 GAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPE 731 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 110/622 (17%), Positives = 208/622 (33%), Gaps = 34/622 (5%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + + + L I +I + Sbjct: 159 HWQHFLDLTRKADLHACWSLPFKDEHNDVLGIFAIYHHIACEPSPKDLELIREFA-SFTA 217 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFF---IIF 251 + + + T+ V++ L I GY Sbjct: 218 LAVQKVRATEALRLSATVFASIREGVVITDLEPRIVAVNRAYMRITGYSEEQVLGKNPKI 277 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--------ISFSV 303 + + + + + + Y + + S S Sbjct: 278 IKSGLHDKTFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDESNSC 337 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCL 355 + + + + + A DPLT LPN +E+A + Sbjct: 338 NYVGVFTDISQIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYI 397 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + + ++E + L +L G E LLVL G Sbjct: 398 DLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPA 457 Query: 416 HMVN---ILNSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + L + + + + F + L+ Q+ Sbjct: 458 FVAQSLINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRN 517 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKY 528 E +S +++++ N +R AL +L+L+ QP+ + G + ++ Sbjct: 518 -TYRYHTEALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPP 576 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 ++ P KF+P+ + L VL + K +VNL + Sbjct: 577 GKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSE 636 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ G + R+ + + + LE+TE + E S+ + +L G +AIDDFGTGY+ Sbjct: 637 NLVGMVQRILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYS 696 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR D +KID FV+D+ + D I +I +A+ L V+AE +E+++Q A Sbjct: 697 SLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAF 756 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + Y QGYL RP P + Sbjct: 757 LRQQDCDYYQGYLFHRPVPAIE 778 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 109/569 (19%), Positives = 214/569 (37%), Gaps = 30/569 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + I + + + ++ A ++ I GY Sbjct: 759 LVGVMLDITERKRMEARLLQAATVFDSSAEG---ITITAPDGNIIA---VNRAFTEITGY 812 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + R +L++ A+ T + + + ++ + Sbjct: 813 TEDEVIGRNPRMLQSGFQDRRFYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAVK 872 Query: 300 SFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + + QA DPLT LPN L E Sbjct: 873 DAQGKVAHYVGVFSDITELRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDET 932 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 G + + +D + ++ G + + + L LM+E++ + +L G E L+V+ Sbjct: 933 GLAVFFIDLDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDV 992 Query: 409 ETEGRLQHMVNILN----SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + H+ + + + +G F + + L+ + Sbjct: 993 GEPTAVSHIAEKILNVLQASPVTVE-HEFFVGASIGISVFPQDGADAETLMKNADVAMYR 1051 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + + + ++ + ++ + +R A+++G+L +Y QP + + G + Sbjct: 1052 AKERGRN-TYEFFTKDLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEA 1110 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 ++ L+ G++ P +F+ L + L V + AT SVN+ Sbjct: 1111 LVRWLRPQQGLVLPGEFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVS 1170 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + + I R + + + + LEITE S+AE+S+ ++ L G + ID Sbjct: 1171 GVEFARGRIQQTARRTLELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVID 1230 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKRL + +K+D FV+ + +T D I R++ L + L+V+AE VE Sbjct: 1231 DFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVE 1290 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ Q+ L G +QGYL GRP P D Sbjct: 1291 TEAQREFLTGEGCDEMQGYLRGRPMPFDD 1319 Score = 58.8 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 9/140 (6%), Positives = 24/140 (17%), Gaps = 10/140 (7%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT----PYENDFIAGYLVPVFF 248 R+ + + A + L + I GY Sbjct: 368 LFEDVTEKRQADRAMEALLREQALIFERAPTGIAFLRDRVIQRCNPSFERIFGYAPGQLL 427 Query: 249 IIFTLGVGKLRYPFL----NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFS 302 T + + + T ++L + + Sbjct: 428 GQSTRVCFASEAAWREAGERAYAVADESGKFIGELEYCRADGTPIWCQVTGSLLNPANPA 487 Query: 303 VCLLYMVRIYHRSEWLNRRW 322 +++ Sbjct: 488 EGYVWLFEDVTARRAAEEAL 507 Score = 58.8 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 18/218 (8%), Positives = 37/218 (16%), Gaps = 23/218 (10%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 S + D V + + + + + + Sbjct: 568 AVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRTIGESADSETWIWAYADVTAQRA 627 Query: 196 AQILWRRDIAPSLG-----------KEKRAFTLSWLAALSVL-----LLLLCTPYENDFI 239 A+ R+ + L V L + Sbjct: 628 AEQALRQSHLELEQRVADRTLELSQQLHFMRQLIEAIPGPVFYKSQEGRYLGCNQAFLEL 687 Query: 240 AGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 G ++ L Y L + F A Sbjct: 688 IGKSRDEVVGATVYDVAPADLADRYKAADDELLARLGSQVYEARVLDADGHYRDVIFHKA 747 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQAL-TDP 330 L+ ++ + + R A D Sbjct: 748 TYGKPGENGGGLVGVMLDITERKRMEARLLQAATVFDS 785 Score = 58.1 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 12/142 (8%), Positives = 31/142 (21%), Gaps = 10/142 (7%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFF 248 R + + A + + +L + I GYL Sbjct: 493 LFEDVTARRAAEEALVESLWEQQLIFDNAMIGISYHRNRMILRCNRRCEEIFGYLEGGLA 552 Query: 249 IIFTLGVGKLRYPFLNLTWAV----STLCLLNYNQNFLQGVETEYSLAFILAVLIS--FS 302 T + + + V ++ + + + T + I + S Sbjct: 553 GQPTRVLFASDEAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRTIGESADS 612 Query: 303 VCLLYMVRIYHRSEWLNRRWHL 324 ++ + Sbjct: 613 ETWIWAYADVTAQRAAEQALRQ 634 Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 15/192 (7%), Positives = 44/192 (22%), Gaps = 19/192 (9%) Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 D +++ G + + L + +T+ +++ + L R Sbjct: 82 IVDLETRLARRDGSTFVAHLIARAIDPAAPRLGTVWIVRDVTQEVLTRDTSARLLREQQL 141 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF--- 262 E L + + GY T + Sbjct: 142 IFENAETGIVILRERI-------IQRCNRRFAELLGYAADELVGQSTRLYYPSEEAWLET 194 Query: 263 -LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLN 319 A++ + + + F + + +++ + +++ Sbjct: 195 GRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGSMMNRANPDEGYVWLYEDVSEKRASA 254 Query: 320 RRWHLQALTDPL 331 D L Sbjct: 255 AAM------DAL 260 Score = 50.3 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 12/147 (8%), Positives = 26/147 (17%), Gaps = 14/147 (9%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT----PYENDFIAGYLVPVFF-- 248 R A + + A + + + + I GY Sbjct: 245 EDVSEKRASAAAMDALLREQTLIFEAAPIGIAFVRDRIIQRCNPSLERIFGYSPGQLIGQ 304 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL-ISFSV-C 304 F R + + + ++ Sbjct: 305 STRCFFASEEAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDG 364 Query: 305 LLYMVRIYHRSEWL----NRRWHLQAL 327 L+++ QAL Sbjct: 365 LVWLFEDVTEKRQADRAMEALLREQAL 391 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 127/717 (17%), Positives = 230/717 (32%), Gaps = 41/717 (5%) Query: 45 AWMPLCVMLSILFIFGWRGVVPVL------CGMFCTNLWNFHLSFLQTAVMLGSQTFVVL 98 W+ + S L G + L T + T + FV+ Sbjct: 452 RWLWTVLGGSALVFAGSAYFLLRLRRSNRMLEALNTQVQRSQNQLQATFDAIPDPLFVLG 511 Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 + + + + L C L + F Sbjct: 512 LDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPEAASICLSALREANEKGTSTGKQFEL 571 Query: 159 DADAIFTVVDL-LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 +L ++ + F L+R I A+ R +E T Sbjct: 572 QLAHGRAWFELSVARKSVGQRQEPRFIVLSRDITERKQAEEALRIAATAFESQEGMTVTD 631 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + A L I GY + + + ++ Sbjct: 632 AQGAV-------LRINRAFTEITGYSADEVVGHNPRLLQSGRHDKAFYAAMWESIRRTGS 684 Query: 275 LNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + Y + + + R + A D Sbjct: 685 WQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMDITRRKAAEDEIRNLAFFDLQ 744 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN R L + + +DN + ++ G ++ + + L Sbjct: 745 TGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRL 804 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMVNILNS---RQIHWNNTGLDM 435 + E + +L G E +++L + + + + + + + Sbjct: 805 ASCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQS 864 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 F QET + LL + Q+ A L + + T + L + Sbjct: 865 TASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRN-TLRFFDPEMQAVVTSRAALEAGL 923 Query: 496 RTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 R A+ + LLY Q + + G + +L + G++ P +F+ L L Sbjct: 924 RRAVTSDEFLLYYQAQVDGQGHLTGCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGR 983 Query: 554 QVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL++ LA + +VN+ Q + +++ + +PQ + LE+ Sbjct: 984 WVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLEL 1043 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + E + + L + G ++DDFGTGY++ LKRL D +KID FV++I+ Sbjct: 1044 TESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNIL 1103 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + DA I R + L + L+V+AE VE + Q+ L +LG QGYL RP PL Sbjct: 1104 IDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLD 1160 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 115/598 (19%), Positives = 209/598 (34%), Gaps = 37/598 (6%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI---LWRRDIAPSLGKEKRAFTLSWLAA 222 + L + + L R I+ + R E + + Sbjct: 147 LYQLEQAVQELDTVWIFSSLLVRQIIDMWHHEEQSERHRLAEQALWASETYLNAILHYSP 206 Query: 223 LSVLLLLLCTP---YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV-----STLCL 274 + + L + F + + W + + Sbjct: 207 ALISVKDLDGNVVLASDHFKHMADIDESGFVGKNVFDVFPRDIAQSMWDIDIATKTNQQT 266 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR---IYHRSEWLNR-------RWHL 324 + + + ++ + L + + + R + Sbjct: 267 YEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVCTIGTDISERKLAENALREQQSRLNY 326 Query: 325 QALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT LPN + + L ID + ++ G + Sbjct: 327 MAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILL 386 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 ++I L +++ + + +L G E ++VL G + + N L SR + + + Sbjct: 387 KAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSI 446 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 F + LL ++ + ++ +LL N Sbjct: 447 SATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKNNC-QFYTKGMNATAVNYLLLEN 505 Query: 494 TIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R A++Q L LY QP + + G + ++ + G+++P F+PL + L Sbjct: 506 DLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVP 565 Query: 551 FDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL K K + +VNL P QKN G++ + + + + + L Sbjct: 566 IGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFPGKVEAILQETGLEAKYLEL 625 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE A +A ++ + QL++ G +AIDDFGTGY++ L+R +KID F+ D Sbjct: 626 EITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHD 685 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 I + DA I ++I LA L VVAE VET+ Q L G +QG+L +P Sbjct: 686 IHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPMTA 743 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 132/647 (20%), Positives = 241/647 (37%), Gaps = 33/647 (5%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + R F + + + + ++G L S F I ++ Sbjct: 277 YADPRPNHDVCRNFGMKGLFMLPLVSMGEVLGQISVVNLGDSNFSYSEGQIQLSQSIVDA 336 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQI----LWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 + L + +I R I + + A + L Sbjct: 337 TASTLSNLLYMEKQEVIIEERTSEITFKNKELERVITELQQLSREKELILNSAGEGIFGL 396 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFL----- 282 L AG + + I L F + + L Sbjct: 397 DLDGNITFCNPAGASMLGYDIKNELIGKPSSMVFNGIEKGKKKQVASGCDEDWNLYDKTE 456 Query: 283 ---QGVETEYSLAFILAVLIS--FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + ++ + + ++++ + V + + + + + A D LT LPN Sbjct: 457 QFFRKDQSSFPVEYVISSIKEGTEIVGEVITFKDVTQRKQMEEEIKYHAYFDSLTDLPNR 516 Query: 338 RALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L+ Q + L +D +F++ G +R + L + + Sbjct: 517 VLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPK 576 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 + + + G E + L ++E + +VN + SR H + + M F Sbjct: 577 SATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPD 636 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 N +T + L+ +S + E + +T + + L N + AL+Q +L++ Sbjct: 637 NGDTTEILVKNADTAMYKSKEIS-GSSYHFFSEGMDTRTFESIKLENDLYKALEQEELVI 695 Query: 507 YAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QP N + EG + ++ + G++ PDKF+P+ + L VL+ + L Sbjct: 696 YYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQL 755 Query: 564 ATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 SVNL L Q ++ + + + +SP+ + LE+TE N ES Sbjct: 756 KKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTES 815 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ +++L G +AIDDFGTGY++ LK+L +KID FV+D+ + DA I + Sbjct: 816 TLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD--DAAITNT 873 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I LAK +L V+AE VET++Q L +QGY RP D Sbjct: 874 IITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAED 920 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 109/598 (18%), Positives = 208/598 (34%), Gaps = 28/598 (4%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 D ++ +V +LF M L I + G Sbjct: 535 RQDGSELWAIVSTNALFNPE-GDYMGTLGLITDITKRKRTEQALYDSEKRLEGILNSLQD 593 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL----TWAVSTL 272 + W A L + G + FF L + + L + Sbjct: 594 VIWSA-DPKTRQSLYLNPAIQLVYGRPMEDFFRDPHLWLCMVHPEDQELVSHHLKLLEDK 652 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTD 329 + ++ L ++ + + + + A D Sbjct: 653 GSTEVHYRIIRPDGETRWLHSRSRLVYDEQGKSLRIDGINSDITERKQAEEQLQYNATHD 712 Query: 330 PLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 LT LPN E + L +D + ++ G + +R I Sbjct: 713 TLTQLPNRLLFMDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIA 772 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 R L ++ ++ L +L G E ++L + + +R + + Sbjct: 773 RRLQKSLRADDTLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNT 832 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 +G E +L ++ A ++ + ++ L +R Sbjct: 833 SIGIALSNGEYEAASEILRDADTAMYRAKAGGKA-CYAIFDQQMHASAVSRLQLETDLRR 891 Query: 498 ALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A+++ + L+Y QPI + + G++ ++ G++ P +F+P+ + L Sbjct: 892 AIERQEFLVYYQPIISLQHDTLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEW 951 Query: 555 VLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 +LE + L + + SVNL L ++ G I R+ + I A+ +EI Sbjct: 952 ILEQAAQQLKIWQTQYRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEI 1011 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N + + + L + I +DDFGTGY++ L R + +KID FV + Sbjct: 1012 TESILMENVQVAADVLIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMR 1071 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 N ++ IVR+I LA + ++AE +ET+ Q A L +G + QGY +P ++ Sbjct: 1072 PNDENSEIVRAIVSLAHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSE 1129 Score = 65.8 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 32/139 (23%), Gaps = 15/139 (10%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + E++ + + + + ++ I GY V + L Sbjct: 447 QANQKLAESEEKYRKIVETTNEGIWISDHHNKITFVNHQMSEILGYTVDKMMGMSLLTFI 506 Query: 257 KLRYP--FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRI 311 ++ + +E L + L ++ Sbjct: 507 DAAQLSLVEKSGQKTEQSLPGTHDLKLRRQDGSELWAIVSTNALFNPEGDYMGTLGLITD 566 Query: 312 YHRSEWLNRRWHLQALTDP 330 + + QAL D Sbjct: 567 ITKRKRTE-----QALYDS 580 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 9/196 (4%), Positives = 41/196 (20%), Gaps = 44/196 (22%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY 242 ++ ++ + + A +++ L+ + + GY Sbjct: 85 QLKQEQQMRRMNIQPSHQELKRVNPHFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGY 144 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTL----CLLNYNQNFLQGVETEYSLAFILAVL 298 + + + W L + + +++ + ++V+ Sbjct: 145 TSQELIKLQLSKITHPEERLSDSQWLNQLLKNSCEAFSREKRYVKKDGSIIWGQVTVSVM 204 Query: 299 ISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCL 355 + ++ + L Sbjct: 205 KDQAKKPQYFIVIINAISDRQETE-------------------------RHRDRFFVMSL 239 Query: 356 RI------DN-LEFMS 364 + D + ++ Sbjct: 240 DLLCIAGFDGYFKTLN 255 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 12/161 (7%), Positives = 32/161 (19%), Gaps = 13/161 (8%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 +I +S+ F + I + L Sbjct: 193 SIIWGQVTVSVMKDQAKKPQYFIVIINAISDRQETERHRD------RFFVMSLDLLCIAG 246 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYN 278 + I GY + L +++ Sbjct: 247 FDG---YFKTLNPVFERILGYSSRELLAQPFIEFIHPDDRSTSLAELANLRQGKETIHFE 303 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 + + L++ A + + + + R + + Sbjct: 304 NRYRCRDGSYRWLSWTSAPYMEEKL-IYAVARDITEEKKIE 343 Score = 42.3 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 12/135 (8%), Positives = 31/135 (22%), Gaps = 9/135 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 +I + ++ E+R + + ++++ L +A + V Sbjct: 328 LIYAVARDITEEKKIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRS 387 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM 308 L ++ + N L Sbjct: 388 ETELLEHPFGLPIVVDKITEICIQPSRNTLIVAEMRSAEITWE---------GEKGYLIS 438 Query: 309 VRIYHRSEWLNRRWH 323 +R S N++ Sbjct: 439 LRNITDSYQANQKLA 453 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 97/611 (15%), Positives = 214/611 (35%), Gaps = 30/611 (4%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT---AVLIYNMLFYYLTRMIVSPHFAQI 198 L+G P+ ++ + T +++ + F + AQ Sbjct: 411 LMGQILGLPIIVNNYSEIEILQPTGKMVIARIRQVKILWEEKEAFLASLVDVTDLKGAQK 470 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGV 255 + E+ ++ A + + + + GY Sbjct: 471 QLKILKQA---TEQSPVSVIITDAEG---HIEYVNRKFEKLTGYTRQEVIGKNPRLLKSG 524 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIY 312 + + L +++ + + + + + ++ + + + + Sbjct: 525 KISQDQYKQLWRTLTSGQEWHGEFHNQKKNGELFWESASISPIKNEEGVITHFIAIKEDI 584 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 R + +R QA D LT LPN QE + + +D + ++ Sbjct: 585 TRRKAQDRILAYQANYDALTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKNVN 644 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS- 423 G ++ + L +++++ + +L G E L+++ + + + + S Sbjct: 645 DTLGHEYGDLLLKQVAERLKKCLRKSDTVARLGGDEFLIIIPNLKQPSHCKGIAKKILSS 704 Query: 424 --RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + + + + + L+ + Sbjct: 705 LEKPFNLLEEEAFISASIGITLYPDDGDDVNALMRNADTAMYLGKRGGRND-FKFYTLGM 763 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 + ++++ N + AL + ++ L QPI + G + +L G ++PD+F Sbjct: 764 NETNRTRIIIENLLHQALKKKEIYLVYQPIMELKTEKVIGAEALLRWNNPQLGQVSPDQF 823 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ + L + V+ + + +VNL P + I Sbjct: 824 IPIAEETGLINQLGAWVISQACQEVVQWKAQGTPISVAVNLSPRQFRDSKLLKIITDAIA 883 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 I+ + LEITE+ ++ S + QLH+ F ++IDDFGTGY+ L + + Sbjct: 884 VNGITNHDLELEITEKLLLEDSPGSQGILSQLHQMNFPLSIDDFGTGYSALSYLIKFPFN 943 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ D+ + +V++I ++ +L V+AE VET +Q L G Y QG Sbjct: 944 RLKIDRSFITDMTHSQKAMGLVKTIIAMSHGLNLQVIAEGVETSEQLNSLKSQGCDYAQG 1003 Query: 719 YLIGRPQPLAD 729 Y RP + Sbjct: 1004 YFFSRPLTGEE 1014 Score = 46.5 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 12/140 (8%), Positives = 28/140 (20%), Gaps = 21/140 (15%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLV 244 I++ + E+R T+ +L+L L + + G Sbjct: 349 IIAVIRDISARKHTELALRESEERLSTIISTNPNGLLILDREGKVLFVNPAAEILFGRPK 408 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-LAVLISFSV 303 + LQ + +L Sbjct: 409 KDLMGQILGLPIIVNNY---------------SEIEILQPTGKMVIARIRQVKILWEEKE 453 Query: 304 CLLYMVRIYHRSEWLNRRWH 323 L + + ++ Sbjct: 454 AFLASLVDVTDLKGAQKQLK 473 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 722 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 113/717 (15%), Positives = 225/717 (31%), Gaps = 46/717 (6%) Query: 55 ILFIFGWRGVVPVLC--GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRW 112 + + G V + ++ + S C Q Sbjct: 676 VRLLHGLAASAAVALENSALLAERRQVEQALRESEALKASVLASAACGIVATDPQGLITV 735 Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + + + + + +A V Sbjct: 736 FNPGAEAIFGYAAHEVVGKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCS 795 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL--------------- 217 R I A + R G + Sbjct: 796 GQVDERETAGVRKDGRRIT-IRLAVTVMRDAQGALAGYLGTIVDITAQKQAAAQLNLAAK 854 Query: 218 -SWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + + ++ I GY + + ++ + Sbjct: 855 VFEQGGEGIAITDAACNIVMINQAFTRITGYSEVEVLGRNPSLLASGRHDQAFYQSMWES 914 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSEWLNRRWHLQA 326 + +L + + Y +++ + + + + A Sbjct: 915 IESLGHWQGEIWNRRKDGSVYPEWLLISRVDGDGAPTHYIGTFIDITQHKEAEASIQRLA 974 Query: 327 LTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN LE+ + + +D + ++ G + + Sbjct: 975 HFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQ 1034 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--RQ-IHWNNTGLDM 435 + L +++ + + +L G E ++VL H+ L L Sbjct: 1035 VAERLRRAVRDEDTVSRLGGDEFIVVLPS-TDADGAAHVAAKLLEVMAPAYRIEQHELTC 1093 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 A + + E+ + L ++ A + ++ + + + N + Sbjct: 1094 SLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRN-AYCFFTAEMQERSARNLQIENDL 1152 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL+ G+L L+ QP ++ G + +L G+++P +F+P+ + L Sbjct: 1153 RRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIG 1212 Query: 553 LQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + + L + +VNL + Q ++ + R+ ++ Q + LE+ Sbjct: 1213 EWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELEL 1272 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE A N +++ +++L G R++IDDFGTGY++ LKR + +KID FV D+ Sbjct: 1273 TESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLA 1332 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + D IV + LA+ L +AE VE++ Q A L G QGYL RP A Sbjct: 1333 ADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPA 1389 Score = 63.1 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 27/291 (9%), Positives = 57/291 (19%), Gaps = 9/291 (3%) Query: 40 SYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFH-LSFLQTAVMLGSQTFVVL 98 F+ + L G + ++ + L + T + F + Sbjct: 249 GIPFVLSPHTRYLGYALLAGSLVGALLLIWVVTLRRLVRQRTATLEATLDAIPDPLFELG 308 Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTF-F 157 + RL L C L + F Sbjct: 309 LDGRYHDCHTPRADLLAAPPDALIGRLLTDVLPAAAAATCLSALREAQATGHSAGQQFEL 368 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 F ++ + F L R I A+ R + L Sbjct: 369 PLRGGNFWFELSVARKPTGVGREPRFVVLARDISERKRAEARLRMATEATQLVFWELDLL 428 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 S +L + + G + ++ L F + + ++ Sbjct: 429 SDQLRYDTSMLQVLGLDHGED-PGSTGALMELVHPDHRAALTESFRAAMASAEPV--FSF 485 Query: 278 NQNFLQGVETEYSLAFILA----VLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + L +V + + Sbjct: 486 EHQIVTHSGEGVWLQTRGRVAQRDAAGRAVLAVGTAMNITDRKRAEAALLR 536 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 722 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 101/565 (17%), Positives = 207/565 (36%), Gaps = 28/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLV 244 + + A + + + S+++ L GY + Sbjct: 726 ALERGAHLASLAIERAQTGAWLNKLSQAVEQSPNSIVITDLNANIEYANDAFVKTTGYTL 785 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 P + + +++ + + TEY ++ L Sbjct: 786 PEVMGKNPRILHSGKTTVETYAAMWTQLNSGQMWRGELINRRKDGTEYVELARISPLRHT 845 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGK 350 L + + + R A D LT LPN L+ Sbjct: 846 DGRVTNYLSIKEDITEQKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHL 905 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L ID+ + ++ G + + + + + L+++ + L + G E +LVL Sbjct: 906 AVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDEDTLSRFGGDEFILVLPD-TD 964 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 H+ + ++ + L + + + L ++ Sbjct: 965 ADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQ 1024 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + ++ +++LL N +R AL + L+ QP + + G + +L Sbjct: 1025 DGRN-NFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQPQISMQDGKIVGAEALLR 1083 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT 583 + G ++P +F+P+ + L VL + ++ + ++NL + Sbjct: 1084 WYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQ 1143 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q ++ ++++ +++P + LE+TE A N ++ + LH G R++IDDFG Sbjct: 1144 FRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFG 1203 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L++ + + +KID FV+D+ + IV +I LA + +AE VET Sbjct: 1204 TGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAG 1263 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q A L G +QGY RP +A Sbjct: 1264 QLAFLRLQGCNEVQGYYFSRPLTVA 1288 Score = 60.4 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 20/236 (8%), Positives = 50/236 (21%), Gaps = 21/236 (8%) Query: 116 LTSRYVWQRLFWLGLVTPIGIK---CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 LT R + V + ++ S L S +++ + VV + Sbjct: 178 LTERDMAGLFVNGAPVEGVSLREVMHSPVLTVSHQTPVFEMAGLMQASRYRHLVVVDDAG 237 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 ++ V E + + + L + Sbjct: 238 LVLGMVTLHKLMARIAATVMNEETLRRQESLEHSMHHAESQLRLIVKTIPDLIWLKDVEG 297 Query: 233 -----PYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 + G + + + + + A+ + Sbjct: 298 VYLSCNPMFERFFGAIEADIVGKTDYDFVSREQADFFRAHDRAAMLADKPSINEEWVTFA 357 Query: 285 V-ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 L + + + +L + ++ LT L N Sbjct: 358 DDGHRACLETTKSPMFNAVGQLIGVLGIAHDITERLAAAKKIER------LTQLYN 407 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 722 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 99/590 (16%), Positives = 221/590 (37%), Gaps = 28/590 (4%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 A + L + +R + H + R+ E+ ++ Sbjct: 207 AIGAKLFDVHMHLVADSVGQRDRVAIFSRDVTQSHQRRQQLRKLETAL---EQAPVSVMI 263 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 + + ++GY + + ++ +++ Sbjct: 264 TDSHG---AIEYVNRAFVLVSGYSEDEVLGRNPRLLKSGETVASLYRDMWHCLASGATWQ 320 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + + ++ + + + + + ++ QA D LT Sbjct: 321 GELCNRAKDGSLFWEYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTG 380 Query: 334 LPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN LE + L +D + ++ G + ++ + L Sbjct: 381 LPNRLLLEDRVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRH 440 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWG 442 ++ ++ + +L G E ++VL+ ++ L + + + + + +G Sbjct: 441 TLRRSDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIA 500 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + + L+ ++ + ++ + ++ L +R AL +G Sbjct: 501 IYPDDGDNFNALMKDADTAMYRAKQKGRN-TFCFYDSNMNDEALDRLKLEEALRRALVRG 559 Query: 503 DLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L+ QP + G + ++ + G ++P F+P+ + NL + VLE Sbjct: 560 EFQLFYQPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEES 619 Query: 560 LKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + +A G + +VN+ L + I L +Y + P + +E+TE + Sbjct: 620 CRQIAAWREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMA 679 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + ++ + +L + G ++++DDFGTGY++ LKRL IK+D FV+D+ + +A Sbjct: 680 EPDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAA 739 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV +I LA A +S+VAE VET+ ++ L G +QG+ +P P Sbjct: 740 IVSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPAD 789 Score = 43.8 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 9/118 (7%), Positives = 27/118 (22%), Gaps = 10/118 (8%) Query: 214 AFTLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 + + + V + L I G L + Sbjct: 10 FLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRHFADDDQRLEVVR 69 Query: 268 AVSTLCL-LNYNQNFLQGVETEYSLAFILA--VLISFSVCLLYMVRIYHRSEWLNRRW 322 + + + F + + + + L +V L ++ + + + Sbjct: 70 QLKEAGEIADADVKFFRVDGSSFWSVLTIRSATLNGEAVNLAWLY-DVSKRKQAEQAI 126 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 722 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 107/588 (18%), Positives = 196/588 (33%), Gaps = 32/588 (5%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + + L + R I A+ R Sbjct: 818 IELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTD------P 871 Query: 226 LLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 ++ + GY + ++ ++ Sbjct: 872 AGYIVQVNDSFSRLTGYSPADVLDQQPRLLTADRQEANQLKHVLASLQHSGSWEGEILQK 931 Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + + + RR H A D LT LPN Sbjct: 932 RKTGELYPSWVGITAVRDEEGDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTL 991 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + L +D + ++ G ++ + L + +++ Sbjct: 992 FQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDD 1051 Query: 392 KLYQLPGSELLLVLSGPETEG----RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 + ++ G E L+L R + ++ +R + Sbjct: 1052 TVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALS 1111 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + L L+ + + ++ + +++ L + +R AL+ G+ Sbjct: 1112 PQDGAELSLLMKNADTAMYHAKEMGKN-NFQFYQAEMNARALERLELESDLRRALELGEF 1170 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +L+ QP G + +L G++ P +F+P++ + L A+ +L K Sbjct: 1171 VLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACK 1230 Query: 562 WLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L + K SVNL + RI + I P + LE+TE S+ Sbjct: 1231 QLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDV 1290 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 +M + L + G IA+DDFGTGY++ LK+ D++KID FV + DA I Sbjct: 1291 AEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIA 1350 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 R+I +A + +L V+AE VE+Q Q L + G +QGYL GRP P Sbjct: 1351 RAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAE 1398 Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 13/205 (6%), Positives = 35/205 (17%), Gaps = 26/205 (12%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 + + R+I Sbjct: 654 VVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGVAK-DITFTVEANNAL 712 Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 +R L+ + + + GY + Sbjct: 713 RENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWALLNGLHQTATNPRQL 772 Query: 263 LNLTWAVSTLCLLNYN-----------------QNFLQGVETEYSLAFILAVL---ISFS 302 L + + + + L+ + + + ++ Sbjct: 773 GRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDCLRADGRKIPIELRIVLMWDEHDRF 832 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQAL 327 LL + R + R + A Sbjct: 833 EGLLGIARDISQQRRAERELRMAAT 857 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/198 (7%), Positives = 39/198 (19%), Gaps = 27/198 (13%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM---------IVSPHFAQILWRRD 203 V++L + + R+ + + Sbjct: 516 RLQVIEALIERRPVLELEATLRCGKSTPRHLWLQLRLPENPGEWHAVTLSLSDVTSRKEV 575 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIAGYLVPVFFIIFTLGVG- 256 + +EK ++ + L + + GY + Sbjct: 576 ELSLIEREKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQEELARMGENFWET 635 Query: 257 -------KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI----LAVLISFSVCL 305 + + NL V LL+ + + L Sbjct: 636 LLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARL 695 Query: 306 LYMVRIYHRSEWLNRRWH 323 + + + + N Sbjct: 696 IGVAKDITFTVEANNALR 713 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 107/574 (18%), Positives = 212/574 (36%), Gaps = 29/574 (5%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 L + + + +++ R+ + Sbjct: 283 LQLLETATHFLAIAIERKQSEVFMRKLSQAVEQSSNAIIITDLN------GTIEYANTTF 336 Query: 237 DFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 GY + R + ++ + + E Sbjct: 337 STNTGYALHDIIGKKPNMHKSGKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLV 396 Query: 294 ILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK 350 ++ + L + + R A D LT LPN L++ ++ Sbjct: 397 RVSPVREADGRITHYLAIEEDITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRL 456 Query: 351 S--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + L +D+ + ++ G + + + + L +++ ++ L +L G E + Sbjct: 457 AEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFV 516 Query: 403 LVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L+L G + + + + L++ + + + L Sbjct: 517 LLLPG-ANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNAD 575 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 ++ A S + + +T+ + +LN +R A+ Q L ++ QP + + Sbjct: 576 VAMYRAKQEGRN-AYRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDV 634 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRF 575 G + +L + G ++P +F+P+ + L + VL + Sbjct: 635 IGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLII 694 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL + + ++++ K PQ + LE+TE A + + ++ + LH+ G Sbjct: 695 AVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGV 754 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 R++IDDFGTGY++ LK+ +A +KID FV+DI T+ D IV +I +AK L + Sbjct: 755 RMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTI 814 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VET +QQA L + G QGY +P P AD Sbjct: 815 AEGVETAEQQAFLREEGCHEAQGYHYSKPLPAAD 848 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 118/701 (16%), Positives = 231/701 (32%), Gaps = 30/701 (4%) Query: 51 VMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGT 110 V+ + + W G++ + L H +L + V A Q Sbjct: 201 VVTATGYRMAWVGILAADGAIIPVGLTQEHQGYLDALKIPLQAGGVGTRAIN-TALQTRR 259 Query: 111 RWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL 170 + + W G + L + + + F ++ Sbjct: 260 PAVANYFANDMSP-TPWRAEAMRRGFYSKLVLPMGDDKDVIGVFNVYASEPDAFDAQEV- 317 Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 +L ++ + R A+ R + +A + Sbjct: 318 ALLVSLAQRVTVEIRAHRDRHGRQAAEAALRLRERAIECSAN---AVIISSAQVPEFAIE 374 Query: 231 CTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + I GY F L + + A++ + + Sbjct: 375 YVNPAFERITGYTAAEAIGRSSSFLLRNDHEQAGLYEIRAALAEKREGKAVLRNYRKNGS 434 Query: 288 EYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + +A + + + + H A D LT LPN L+ Sbjct: 435 LFWNDLYIAPVKDDEGKTTHFVAAMSDITPMKQYETTLHRLASHDVLTGLPNRALLQDRL 494 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + +D +F++ G ++ I L ++E++ + +L Sbjct: 495 ENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARL 554 Query: 397 PGSELLLVLSGPET--EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 G E +LVL G ++ + + + + + + + Sbjct: 555 GGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGADP 614 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL +S ++ Q +++ + +R A++ +L+L+ QP Sbjct: 615 TTLLAHADVAMYRSKELGRN-NFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQPQ 673 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + ++ G++ P F+ L + L VL++ + Sbjct: 674 VDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQD 733 Query: 569 DKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R +VNL Q ++ I + + + + +E+TE ++ E ++ + Sbjct: 734 MGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTL 793 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L G ++++DDFGTG+++ LKR D +KID FV+DI N DA IV SI LA Sbjct: 794 RDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLA 853 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+V+AE VET Q +L G +QGY +P P Sbjct: 854 HNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSD 894 Score = 43.0 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 18/175 (10%), Positives = 41/175 (23%), Gaps = 17/175 (9%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 +L L + L R + A L L +K + L + Sbjct: 11 ANLNLLQAGLYALASPLLNLLRRYATRRRAGFLADPATESLLAADKIVWVL--RIPDGQV 68 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN----LTWAVSTLCLLNYNQNFL 282 + T + + G F+ L + + L ++ Sbjct: 69 IYASKT---VEALYGSSPERFYANSRLWLENIAPADREPALELLGSILHEPQQTLRLRIN 125 Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHL-----QALTD 329 + + + + + S + + L +A+ D Sbjct: 126 RSDGSPRWIEYHARFIPDTDGRSGHVKLIGTDITTRHHLEIALARSNRALRAIHD 180 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 120/646 (18%), Positives = 221/646 (34%), Gaps = 44/646 (6%) Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL-LSLFTAVL 177 R L + + ++ + + L + Sbjct: 270 LAAANRNLVQALAILLAVWLLVFGGAWVLARGVMDRGLAEEMRIRELNEQLEQRVLERTA 329 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 L R I A+ R +E T + +L Sbjct: 330 RLESANQELNREIAERSRAEAELRIAAIAFDSQEGMMVTDAHGV-------ILRVNRAFV 382 Query: 238 FIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 GY + + V + Y + Sbjct: 383 EETGYSAEDVVGRKRTMLTSGREDAALDDAMWETVQRCGAWQGEVWDRRKNGEVYPVWLT 442 Query: 295 LAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 ++ + + + + + + H A DPLT LPN R L Sbjct: 443 ISAVKGQGGLVTHYVATHIDITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGS 502 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + +DN + ++ G + + + + L +++ + + +L G E ++ Sbjct: 503 TRSRNQGAIMFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVV 562 Query: 404 VLSGPET----EGRLQHMVNILNSR---QIHW---------NNTGLDMGYGAAWGRFDGN 447 ++ +++ + + + N F + Sbjct: 563 MVQDLAADSMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAH 622 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL Q Q+ A+ + + T +V L +R A++ G LY Sbjct: 623 STNVDELLKQADLAMYQAKDSGRN-AIRFFDPEMQAAITSRVALEADLREAVEAGQFQLY 681 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + +L G++ P +F+PL + L VLE+ LA Sbjct: 682 YQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLA 741 Query: 565 TH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 T + +VN+ + Q + +++ + +PQ + LE+TE SN E Sbjct: 742 TWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVED 801 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + L G ++DDFGTGY++ LKRL D +KID FV +++T+ DA I + Sbjct: 802 IIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKM 861 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I LA++ L+V+AE VET++Q+ L + G QGYL +P PLA Sbjct: 862 IVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLA 907 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 130/768 (16%), Positives = 264/768 (34%), Gaps = 54/768 (7%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYI---FLAWMPLCVMLSILFIFGWRGVVPVLC 69 I+ LA + ++ ++ L I+H + L + L L F R + P L Sbjct: 56 IWLLALFA--LFHGINEWLDLLNIVHGASPLLDALRGLILPFSFLPLLEFARRLLQPWLG 113 Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTF---------------VVLCACAILRWQLGTRWRY 114 L ++ + ++ + +L +LR+ Sbjct: 114 RWASPWLLIVPIAVVVLTALISQLDWLAISVASRYAIGLPGALLAGIGLLRYSRTDEPWA 173 Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF--TVVDLLSL 172 + L L + + S +F + + L +L Sbjct: 174 DHGRVRAALVVVGLALAIYGLLTGLIVPPLDIPLARSLNSQWFLEQTGVPVQLFRALCAL 233 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 I+ +L + H ++ + + + + AA +++ L Sbjct: 234 TAGAAIWYVLHTFEIGRERQLHQMASETQQALHQARQLGQEQQMILDAAADAIIGLDNRG 293 Query: 233 -----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN-------LTWAVSTLCLLN-YNQ 279 + GY + L L + + ++ Sbjct: 294 RVTFSNPAATALFGYSAEELQGEDLHALIHLCKEGEAHPREECGLWRLLRFGGQYHSGHE 353 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 T + + + ++ R + +A D LT L N Sbjct: 354 TLRHKDGTPLPVEMNGSAIDDEKGVVIGAVLTFRDISERLSYEQELERRAHYDELTGLAN 413 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L+ + L +D+ + ++ G + +I + L +++ Sbjct: 414 RVLLKARLQQTTAQAHRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQTVVR 473 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 E + + + G E ++VLS P+ + L + + + L F Sbjct: 474 EADTVARHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVSLFP 533 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + LL ++ L E ++ +K++ +L+ +R A+++ +L Sbjct: 534 RDGTDVDTLLRNADAAMYRAKHLGRN-NLQFYSEEMNLSLSKRLRMLSQLRQAVERNELC 592 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ QP + G + ++ + G+++P +F+PL + L VL + Sbjct: 593 LHYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQ 652 Query: 563 LATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 R SVNL + I + ++ ++P+ + LE+TE +N + Sbjct: 653 GVAWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIANPQ 712 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 S+ + + G R+A+DDFGTGY++ L+R D+IKID FV D + N +A IVR Sbjct: 713 QSVQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVR 772 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ +A+ +AE ET + L + G +QGY I RP P + Sbjct: 773 TVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGE 820 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 113/588 (19%), Positives = 207/588 (35%), Gaps = 29/588 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + + S + +TR I + ++ A Sbjct: 231 PTWLETIKSPVRDNDGNLIGILGMTRNITRRKMVETQLSLASKIFNNSQEGMVITDRNAN 290 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 ++ I GY + + L + T Sbjct: 291 ------IIDVNTAFTQITGYRSEEVIGKNPRILRSGHHDQGFYKQLWHQLETKGQWKGEF 344 Query: 280 NFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + Y ++ ++ + + + + A DPLT LPN Sbjct: 345 INRKKDGSIYPQLATISAVMDDKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPN 404 Query: 337 FRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L EQ + L ID+ + ++ G + + L ++ Sbjct: 405 RTHLLSLLEQHIETGHKNQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILH 464 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT-GLDMGYGAAWGRF 444 N + ++ G E +++L ++ L V + S + N L + + Sbjct: 465 LNAHVARIGGDEFVIILPDVHSDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALY 524 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + + LL + + ++ ++ V + + + A+++ L Sbjct: 525 PRDGQDSETLLKNADTAMYLAKKNGRN-GYAFYSPDLTDKSVSHVRIQSALHQAIEKQQL 583 Query: 505 LLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP N E G + +L + G++ P F+P+ + L VL + Sbjct: 584 RLEFQPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQ 643 Query: 562 WLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 R +VN+ L L Q N R+ + + Q + LEITE + Sbjct: 644 QGNAWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDP 703 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + ++ ++ QL + G I++DDFGTGY++ LK L + +KID FV D+ +N+ IV Sbjct: 704 QQAIASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIV 763 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I + K SL VVAE +ETQ+Q L + G Y QGYL RP Sbjct: 764 NAIIAMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAE 811 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 100/591 (16%), Positives = 226/591 (38%), Gaps = 37/591 (6%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + LL+ ++ + +L R H +R ++ + + A+ + Sbjct: 356 IFLLLATIFSLGFSLLFSGWLNRKFTEYHREIESKQRALSLASQ-------VFDNASEGI 408 Query: 226 LLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 ++ LL I GY F + ++ ++T Sbjct: 409 MVTGSDNRLLTVNDAFVDITGYSADEVVGKNPKFLQSGRHDETFYRSMWQMINTSGYWRG 468 Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + + + + + + + + + + + DPLT L Sbjct: 469 EIWNRRKNGEVFPQWLSIQAVTDSAGMARNYIASITDLTERKQVEEKLRYLSDFDPLTNL 528 Query: 335 PNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 PN R L +Q + + + +D+ + ++ G ++ + + + Sbjct: 529 PNRRLLGYRVDQTLSLSRRQPDQQFALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITE 588 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWG 442 L++E + + +L G E ++++ + ++ + ++ + N++ L + Sbjct: 589 LVREGDTVSRLGGDEFMILMPELHKLEQAANLAERILHNIAQPLE-NDSHLMITPSVGIA 647 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + ++ LL + ++ + ++++ + ++R A++ Sbjct: 648 VYPNDGDSFDKLLRNADAAVHFAKRQGRN-NYQFYTAEMNQRASERLQVEISLRKAVENQ 706 Query: 503 DLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L+ QP N G + ++ + G++ P++F+PL + L + VL Sbjct: 707 EFELFYQPQLNLRDGSLAGVEALIRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEA 766 Query: 560 LKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + A + SVN+ + + +SP+++++EITE Sbjct: 767 CRQGAEWAAKSTEPFTMSVNVSVRQFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQ 825 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + E ++ + +L + G ++++DDFGTGY++ LKR D +KID F+ D+ N DA Sbjct: 826 DEEKTLTLLHELKELGVQLSLDDFGTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAA 885 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +I D+A L VAE +E +Q L +G QGY +P P D Sbjct: 886 ITSAIIDVASHFGLVTVAEGIEKPEQAEFLASVGCIEGQGYYYEKPIPAND 936 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 109/565 (19%), Positives = 216/565 (38%), Gaps = 34/565 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF--- 248 ++ ++ E R + + + +L I+GY Sbjct: 207 ELFFQNAEKEKRVGELRVAATVFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQS 266 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 + + + + +++T + Y+ + + Sbjct: 267 PKLFNSGRQDKAFYKEMWNSINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNY 326 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + R S+ + + + A DPLT LPN R L + + L + Sbjct: 327 VATFRDITTSKAASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDL 386 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 DN + ++ G + ++ + L ++E + + +L G E +++L + ++ Sbjct: 387 DNFKTLNDTLGHDVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLENL-SLQAIEAA 445 Query: 418 VNIL---------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 ++ N F GN+ ++ LL Q QS A Sbjct: 446 NKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAA 505 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARL 526 + + + + +R A++ L+ Q + + G + ++ Sbjct: 506 GRN-TWHFFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVSSSGQTLGAEALIRWQ 564 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTL 584 + G ++P F+PL + L VL+S L + +VN+ L Sbjct: 565 HPERGQVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQL 624 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q++ ++ KR+ I+P + LE+TE N + + L K G ++DDFGT Sbjct: 625 HQEDFVEQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGT 684 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ + LK+L + IKID FV+D++T+ D IVR+I ++ + +SV+AE VET ++ Sbjct: 685 GYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEE 744 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L G + QGYL +P P+ + Sbjct: 745 RQYLLDNGCTHYQGYLFSKPVPINE 769 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 110/606 (18%), Positives = 195/606 (32%), Gaps = 25/606 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 + + + L + F I + + + Sbjct: 196 ASLLARALHPAPHSFERRRRDGTVLLIQGRPLPQGGFVTTYTDITARKRDKERLQLADKV 255 Query: 207 SLGKEKRAF--TLSWLAALSVLLLLLCTPYENDFIAG---YLVPVFFIIFTLGVGKLRYP 261 + L T G G G Sbjct: 256 FENSREAIVITDLGHRIVSVNPAYTEITGIAATAAQGTCFRPGSDDGDSGEEGEGAGGPD 315 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRIYHRSEW 317 + V + ++ Y ++ + + + + Sbjct: 316 SRTVWAIVGEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDITARKR 375 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGL 369 A D LT L N +L + L +D + ++ G Sbjct: 376 AEADIQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGH 435 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QI 426 + ++ + R L ++E + + +L G E ++VL G + H+ L ++ Sbjct: 436 PVGDELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPY 495 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + T L F + L+ + A + ++ T Sbjct: 496 CVDTTELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAK-FQFYTDEMNRAAT 554 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++ L +R A+ +G+ L+ QP + G + ++ G++ P +F+PL Sbjct: 555 ARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAE 614 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + + VL + R SVNL L +K + + + Sbjct: 615 ETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGL 674 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 P + LEITE N + ++ ++ L G RIAIDDFGTG+++ LK D +KI Sbjct: 675 RPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKI 734 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F+ DI + D MIV + LA LSV+AE VE+ Q A L +LG LQG+ Sbjct: 735 DRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFS 794 Query: 723 RPQPLA 728 RP Sbjct: 795 RPVTAD 800 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 719 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 122/746 (16%), Positives = 252/746 (33%), Gaps = 47/746 (6%) Query: 24 LIQLSRFISPLAIIHSSYIFLAWMPLCVMLSI--LFIFGWRGVVPVLCGMFCTNLWNFHL 81 + ++ F S + + +L PL I L I +P+ F + Sbjct: 1 MDVITSFFSTDGFMPHGHCYLWQPPLLWTYIISDLMIAVAYYSIPMALVYFVRKRPDLQF 60 Query: 82 SFLQTAVMLGSQ------TFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 +++ + + W + + V + W + + Sbjct: 61 NWIFVMFSIFIFACGTTHLLSLWTIWNPDYWADASMKAVTGVASLVTAIMLWRLMPQALR 120 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 I + L + ++ ++ D L + R++ Sbjct: 121 IPSTRQLEETVERLEHEVEERELAERSLAAFNDTLETLVQQRTAE--LEEINRLL---KL 175 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--------------LCTPYENDFIAG 241 L R +++RA V+ + + Sbjct: 176 EIDLRREAEQTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYLNPVAERMTGWSNAEAQGK 235 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 L+ VF I+ + P + L N+ + EY++ A + Sbjct: 236 PLLEVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHTA-LIGRHGNEYAIEDSAAPIRDQ 294 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------- 351 ++ + + + + A D LT LPN L Q + Sbjct: 295 DGNVLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALTIARRDQEFI 354 Query: 352 -FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +D+ + ++ G + ++ + R L ++ ++ + + G E +++L Sbjct: 355 ALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEFMILLPELTN 414 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + L + + + + F + E + L + + Sbjct: 415 YFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNADAAMYHAKS 474 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 ++ + + L + +R A+++ + +LY QP + + G + ++ Sbjct: 475 LGRN-NYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIR 533 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 G++ PD+F+P+ L L V+ + +VNL + Sbjct: 534 WQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQ 593 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L Q N + + + P + LE+TE A + + +L G ++A+DDFG Sbjct: 594 LRQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFG 653 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL + +KID F++DI T+ DA I+ +I ++ L+V+AE VE Sbjct: 654 TGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENIN 713 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L K G +QG++ RP P + Sbjct: 714 QLEFLKKEGCDQMQGFIASRPVPADE 739 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 719 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 107/604 (17%), Positives = 224/604 (37%), Gaps = 39/604 (6%) Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 F + D L+L + I A+ R + Sbjct: 731 HQYRFMHANGGYIWIEDQLTLTRDNNGKPLEIVGAWLDITDRLSAEEKLRLNAK------ 784 Query: 212 KRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFL 263 + + +++ ++ I GY + Sbjct: 785 -----VFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPHMLASEKLEESFYS 839 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNR 320 + ++ + + Y+ ++ + + + ++ + Sbjct: 840 AMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKISQHIGIISDISERKVAEE 899 Query: 321 RWHLQALTDPLTLLPNFRALEQA----PEQEAG----KSFCCLRIDNLEFMSRHYGLMMR 372 R + DPLT LPN L + + +D +F++ G + Sbjct: 900 RIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDRFKFINESLGPSIG 959 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWN 429 ++ + + M+ + + + G E +L+L H+ L ++ +++ Sbjct: 960 DQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPN-TDAEGAAHVAKKLLDIVAQPFNFH 1018 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 + + + + E+ + L ++ + Q + Sbjct: 1019 GQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRN-NFQFFARQMHEQAHDIL 1077 Query: 490 LLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 LL + +R+A++ + LLY QP + + G + ++ + G+++P F+P+ + Sbjct: 1078 LLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESG 1137 Query: 547 LSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L A VL + +K LA+ G +VNL + Q + G + ++ + + P Sbjct: 1138 LIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPS 1197 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE A ++E ++ + QL+ G R++IDDFGTGY++ LK+ + D +KID Sbjct: 1198 MLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQS 1257 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+ I ++ DA I+ +I +AK+ S +AE VET +Q L +QGY +P Sbjct: 1258 FVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPL 1317 Query: 726 PLAD 729 P + Sbjct: 1318 PSTE 1321 Score = 61.1 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 18/193 (9%), Positives = 49/193 (25%), Gaps = 17/193 (8%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + G+ + + + F + L++L + L F ++ S A+ ++ Sbjct: 298 VGGTKWTLFFQTTPAFETRILPYGKPMLVALLGSTLTILSAFLAWF-LLSSRQLAESRYQ 356 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + + A ++ + + + + L V T Sbjct: 357 KLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINNVTKHPEFNTNL 416 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 ++ + + + + L ++R + R Sbjct: 417 ISDI--------PTKDEWQYRRKDGSRFIAEVNCRKLD--KNYYFTIIRDLTERKLAENR 466 Query: 322 WHLQALTDPLTLL 334 LT L Sbjct: 467 ILH------LTQL 473 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 719 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 114/697 (16%), Positives = 232/697 (33%), Gaps = 36/697 (5%) Query: 60 GWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAIL--RWQLGTRWRYGLT 117 R + + + ++ + + L + + Sbjct: 253 HIRRIRDGKIAYSWLDPGRDTPRDKLMHFRSLPELGWIVASSSYLDEVYAPLRILGTIIV 312 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + L L L +G+ S L ++ SL + Sbjct: 313 VAVLLTLLLTLPLCYALGLSISRPLTVLMTRMRDADRGDLSVRADENARGEMGSL---SM 369 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCT 232 +N L R + A + + + Sbjct: 370 HFNRYMDRLVDFRDELRAEIDERTRAEQRLR----LYEKVFENALEGISITDKSGVMVAV 425 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 I G+ + + + + + Y Sbjct: 426 NPAFTTITGFTSEEVIGKNPRVLKSDMHGEEFYGEMWTTLKARGSWHGEIWNRRKNGESY 485 Query: 290 SLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 ++ + + + + + D LT LPN + Sbjct: 486 PEILSISSIRDDDGEIANYVAVFHDISDMKHKEEQLAHHLYHDGLTGLPNRVLVLDRLSM 545 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + L +DN + ++ +G ++++ L+ L ++ + + + G Sbjct: 546 ALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDTVARQGG 605 Query: 399 SELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E L+V+ E + + + + + + + + L+ Sbjct: 606 DEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDGQDPASLV 665 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 QS A + +S + +++ L + +R AL + + +Y QP + Sbjct: 666 KNADMAMYQSKAKGRNSYF-LFTQQMSERIAQRLTLESDMRRALKEREFTVYFQPKVDLA 724 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 E G + ++ +K DG I++P+ F+P+ + L VL++ K + Sbjct: 725 SGEVSGLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCS 784 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL P+ Q+++ ++ +R + + LEITE ++ +SS+ + +L Sbjct: 785 ALTVAVNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSVAQLNRLV 844 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G I+IDDFGTGY++ LK +KID F++DI + DA IV ++ +A+ Sbjct: 845 ELGITISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMG 904 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VVAE VET++Q LL G +QGY RP PL Sbjct: 905 IGVVAEGVETKEQLDLLATFGCATVQGYYYSRPLPLE 941 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 113/593 (19%), Positives = 202/593 (34%), Gaps = 33/593 (5%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++ + T + F R I + R E T + Sbjct: 435 SLMWLSASWVPITDSKGEFIGFRTSGRDITERKQVEAELRIAAVAFDSMEPMMITDA--- 491 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 +L GY F + + + Sbjct: 492 ----SATILRVNSAFTECTGYTAEEIVGQTPRVLRSGRHDDAFFQEMWEEIHSAGGWQGE 547 Query: 279 QNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + Y ++ + + + R A D LT LP Sbjct: 548 VWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTHHDITERKIAEERIKELAFFDALTRLP 607 Query: 336 NFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L Q + + +D+ + ++ G ++ + R L + Sbjct: 608 NRTLLLDRLRQAITASARNEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSV 667 Query: 388 QENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGA 439 E++ + ++ G E ++VL E + + + + + H Sbjct: 668 LESDTVARVGGDEFVVVLGNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASI 727 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F G+Q ++ LL Q +S A+ + + ++ L +R A+ Sbjct: 728 GATVFRGHQASIDELLKQADLAMYKSKERGRN-AVRFFDPDMQTVVVQRAALEAGLRNAI 786 Query: 500 DQGDLLLYAQPIRNK-EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + LL+ Q G + ++ GI+ P +F+PL + L VLE+ Sbjct: 787 EDNQFLLHYQAQVVGTRVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEA 846 Query: 559 LLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 LA +VN+ + + ++ + R P + LE+TE Sbjct: 847 ACAQLARWAARPDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVL 906 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N + + + L G A+DDFG GY++ LKRL D +KID FV+D++ ++ D Sbjct: 907 VDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSND 966 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A+I R+I LA++ L V+AE VET+ Q+ L G QGY RP P+ D Sbjct: 967 AVIARTIVALARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIED 1019 Score = 65.8 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 20/268 (7%), Positives = 54/268 (20%), Gaps = 21/268 (7%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVL----CACAILRWQLGTRWRYGLTSRYVWQRLFWL 128 + ++ + + + I + L + Sbjct: 211 VAQRRAHLVGWVYASFRMHDVIASLYGEQPPGLTIAIYDGVETSAAALLHKTPEA--PGH 268 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 VT + + + G + + F L T + +L Sbjct: 269 HRVTDMAANEYLVVGGHDWTLSMNAQDDFKARFGRNA--ALPIASTGTGLSLLLALLTWL 326 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYL 243 M+ A L E++ ++ + + GY Sbjct: 327 MMTGRGRAMRLASAMTKELRENEEKFRAIADCTVNWEIWWGTDGKPRWINSAVEAYIGYT 386 Query: 244 VPVFFIIFTLGV-----GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 V + + A+ L + ++ + L+ + Sbjct: 387 VDECMALPDFAGTVIYPADIPRVAPEFQKALQGLRGDDLEFRCVRKDGSLMWLSASWVPI 446 Query: 299 ISFSVCLLY---MVRIYHRSEWLNRRWH 323 + R + + Sbjct: 447 TDSKGEFIGFRTSGRDITERKQVEAELR 474 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 107/626 (17%), Positives = 220/626 (35%), Gaps = 20/626 (3%) Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 + WL ++ + +F + + DA + + +L Sbjct: 6 AINMIWLAILLAFVYWFLEPTIYAFVLQKGTFTDKWLHPDAEELRTRMSVVSLLLLFGVY 65 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYENDFI 239 L R Q ++ T+ + + + + D Sbjct: 66 AQTMLKRQQQIMESLQASKQKIRQIIDTANDAFITIDAEGSISDWNPMAEMIFGWPEDLA 125 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 G + + + + + L E+ ++ Sbjct: 126 IGKSMMDLIMNQAPRNALIDDIQEFINTGSAPFTQGQIVITALHRDGHEFPAEMSISPQA 185 Query: 300 SFSVCLLYMV-RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + R + + + A D LT L N + Sbjct: 186 VGASFIFNIFVRDISQRKADEEKLETLATRDELTGLINRFSYNHLLKKEVALAKRHMESL 245 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G + +R L ++E++ + ++ G E L+++ G + Sbjct: 246 AVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRESDTVARIGGDEFLIIMPGIKD 305 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + + +G + + + ++ L+ Q+ Sbjct: 306 VHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADTAMYQAKD 365 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 A + + K++ + +R A+++ L QP + G + +L Sbjct: 366 SGRN-AYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLR 424 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPL 582 + G ++P F+ LI NL VL+ K R +VN Sbjct: 425 WTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAAR 484 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q ++ + + ++ ++ + + LEITE A ++ E ++ ++ L + G IAIDDF Sbjct: 485 QFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDF 544 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTG+++ LKR DI+KID F+ +I DA IV +I+++A + + V+AE VET+ Sbjct: 545 GTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETK 604 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q L G +QGYL RP P Sbjct: 605 YQLEFLRGHGCDMIQGYLFSRPVPPE 630 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 104/575 (18%), Positives = 209/575 (36%), Gaps = 34/575 (5%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 ++ I + A+ R + T + + +L I Sbjct: 263 IWGLCGISTDITALKNAETSLRIAATAFESSDGILITDAGCS-------ILQVNSAFTTI 315 Query: 240 AGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY + + L V+T + Y ++ Sbjct: 316 TGYSAEDVVGKNPRILSSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITIS 375 Query: 297 VLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------- 346 + + + S+ + + A DPLT LPN L Q Sbjct: 376 EVKDKDGKVTNYVSVFTDISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSSR 435 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D+ + ++ G ++ L ++ + + + G E ++VL Sbjct: 436 TGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVVL 495 Query: 406 SGPE-TEGRLQHMVNIL-------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 + + + + F G++ ++ LL Q Sbjct: 496 EDLDRNATEAAAIAEQIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLLKQ 555 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KE 515 Q+ L + + + + + L + +R A+++ L LY Q + + Sbjct: 556 ADISMYQAKKAGRN-TLRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQR 614 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGP 573 G + ++ + + G ++P +F+P+ + L V+ + LA +KK Sbjct: 615 MVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHL 674 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ + + + I + LE+TE + + + + L Sbjct: 675 MIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKAL 734 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++++DDFGTGY++ LK+L D +KID FV+D+ + DA++V++I DLA ++ Sbjct: 735 GVKLSLDDFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRIN 794 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VET+ + +L G + QGYL GRP P+ Sbjct: 795 VIAEGVETELELDILKGYGCRLYQGYLFGRPVPIE 829 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 98/570 (17%), Positives = 189/570 (33%), Gaps = 27/570 (4%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + + A R A +L + I Sbjct: 388 VEYLLFSLVDVTDRQKATAQLRLIETAFQHTRDAVLITDARAR------ILRVNPAFETI 441 Query: 240 AGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY + A+ T + + ++ Sbjct: 442 TGYSAGEVVGRTPRMLQSGRHDGAFYRRFWRALETEGHWSGEIWNRHRDGHIFPAWQSVS 501 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + + + + + D LT LPN + Sbjct: 502 AVKGPDGSTTHYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAAR 561 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ G + + + + + + + + G E +++L Sbjct: 562 DRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVIL 621 Query: 406 SGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + ++ ++ L + + + + L+ Sbjct: 622 ADSDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMY 681 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 + + +S T+++ L N + AL G+ LY QP ++ G + Sbjct: 682 HAKSLGRN-TYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLE 740 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNL 579 ++ + G + P +F+PL + + R VLE + +VNL Sbjct: 741 ALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNL 800 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 PL L + + ++ L ++P + LE+TE + + +L + G R +I Sbjct: 801 SPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSI 860 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L R D +KID F++D+ A I R+I LAK L VVAE V Sbjct: 861 DDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGV 920 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET +Q L + G QG+ RP P + Sbjct: 921 ETAEQLEFLERAGCDGAQGFYFSRPVPADE 950 Score = 52.3 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 29/283 (10%), Positives = 59/283 (20%), Gaps = 46/283 (16%) Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 L V A+ L R R L V +G + G Sbjct: 1 MDYLILALGVAFVPIALAYGLLLKPKRAEAALRRSAFHLREAQQVANLGSWELDLVQGRL 60 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI-- 204 F D + + + R I +I+ R + Sbjct: 61 EWSDQVFRIFEIDPERFEASYEAFLALVHPDDRERVDAAYRRSIADRGSYEIVHRLLMPD 120 Query: 205 ---------------------------------APSLGKEKRAFTLSWLAALSVLLLLLC 231 + K R + +V++ L Sbjct: 121 GRVKHVRERCQTFYSEDGRPLRSVGTVWDVTSFHETEEKLHRLAAIVESTGDTVIVSDLQ 180 Query: 232 TPYE-----NDFIAGYLVPVFFIIFTLGVGKLRYPFLN---LTWAVSTLCLLNYNQNFLQ 283 + + GY + L L + ++ + L Sbjct: 181 GRIRTWNKGAERMWGYAAEEIIGQPVTVLPPLAKQGEPGQILRRVIDEHEVVRFESRGLH 240 Query: 284 GVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWH 323 ++ ++ ++ L + ++R E L Sbjct: 241 KDGRDFPISLTVSPLFDAENRLTGVSAIIRDITEMERLKATLQ 283 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 13/167 (7%), Positives = 38/167 (22%), Gaps = 12/167 (7%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA------ 222 + L A+ + + +++ P A+ RR ++ A SW Sbjct: 1 MDYLILALGVAFVPIALAYGLLLKPKRAEAALRRSAFHLREAQQVANLGSWELDLVQGRL 60 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + + + ++ ++ + +++ L Sbjct: 61 EWSDQVFRIFEIDPERFEASYEAFLALVHPDDRERVDAAYRR---SIADRGSYEIVHRLL 117 Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + + V + H A Sbjct: 118 MPDGRVKHVRERCQTFYSEDGRPLRSVGTVWDVTSFHETEEKLHRLA 164 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 105/589 (17%), Positives = 203/589 (34%), Gaps = 29/589 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 +I + L L + + I A + ++ Sbjct: 357 SIRWLHGLGKLEFDNDGLPVKMVGTVQDITEQKRASDSLLKLSLAVEQSPN---SIVITD 413 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + + GY + F + ++ + + Sbjct: 414 LDG---KIEYVNNMFIKVTGYSRDEVLGQNPRILKSGKTPQTTFKEMWAHLTRGDIWHGE 470 Query: 279 QNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + ++ Y + + + + + + A D LT LP Sbjct: 471 IINRRKDKSIYIESATITPVKQADGKITNYVAIKEDITEKKKAEAYTENLAYFDQLTGLP 530 Query: 336 NFRALEQ----APE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R L+ + L +DN + ++ G + + I + + + Sbjct: 531 NRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAI 590 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRF 444 +E + + +L G E +++ H+ L + L + + Sbjct: 591 REVDTVSRLGGDEFIMLFPN-TDANAAMHIATTLIQEISKASVVEHNELTITPSIGIAIY 649 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + LL + + ++ + L N +R AL + +L Sbjct: 650 PNDGNDFKTLLKNAETAMYRVKNDSRN-GFHFVTPEMQLSASRNLQLENALRHALKRNEL 708 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LY QP N + G + +L + G+++P +F+P+ VL + ++ Sbjct: 709 QLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIR 768 Query: 562 WLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 D +VNL + QKN+ I + + + + LE+TE + Sbjct: 769 QTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDP 828 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 ES + + H+ G R++IDDFGTGY++ LK+ + +KID F++DI + D IV Sbjct: 829 ESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIV 888 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I D+A L +AE VET +Q A L G +QGY +P P + Sbjct: 889 SAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVE 937 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 717 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 103/576 (17%), Positives = 207/576 (35%), Gaps = 31/576 (5%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLLL-----LCTPYE 235 + + + + ++ + + R + + ++++ + Sbjct: 228 ATVAQRTAALKTSNEQLKQQMIEREQAQHRLRLTAGVFENTSEAIIITDAANRVMEVNPA 287 Query: 236 NDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 I GY F + + + + Y Sbjct: 288 FVRITGYPADEVIGRDPGFMKSHRHTHEFYAEMWKKIWQTGQWQGEIWDRRHNGEIYPKW 347 Query: 293 FILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG 349 + + L+ + R + R A D LT LPN + + Sbjct: 348 LTINAVYDERGHLVNCIGIFSDISRLKATEERLEQLAFFDCLTKLPNRAHFQSRLDHALT 407 Query: 350 KS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D+ + ++ G + + + ++E + + ++ G E Sbjct: 408 AANRRQNKVGLIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDTVARMGGDEF 467 Query: 402 LLVLSGPETEGRL-QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++L+ ++ ++ + I + L +G + + L+ Sbjct: 468 TIILADLTDTAKVMTNVALTILESFTHPIVLEDKKLFIGCSLGMAIYPDDSGNAALLIKH 527 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--- 514 ++ ++ Q ++ L + +R A+D LY QP + Sbjct: 528 ADTAMYRAKESGRNR-YSFYTAEMNAQAQSRISLESELRYAIDHKAFELYYQPKVDAHSS 586 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GP 573 E G++ +L + G+++P++F+P+ + L A QV+E + L Sbjct: 587 EIVGFEALLRWIHPTEGVISPNQFIPIAEESGLIAAIGNQVVEMACQGLQRINRCTPKPL 646 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 ++NL L Q N+ + Y I + + LE+TE E S ++ LH+ Sbjct: 647 PVAINLSVRQLRQDNLVNYFSQTLANYGIEAEQLELEVTESFLAKPIEKSAALLQALHQL 706 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G++IAIDDFGTGY++ LK +KID FV ++ N IV++I +A A Sbjct: 707 GYKIAIDDFGTGYSSLSYLKNFPIHTLKIDRSFVMEVAHNQESRTIVQAIISMAHALGYD 766 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +VAE VET Q +L LG +QG+ RP PL + Sbjct: 767 LVAEGVETAAQVNVLQGLGCGIMQGFHYARPAPLHE 802 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 717 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 110/615 (17%), Positives = 225/615 (36%), Gaps = 41/615 (6%) Query: 154 STFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD----IAPSLG 209 F F L ++ VL+ +++ + R+ +D Sbjct: 190 RDLFAGLYDNFLSSLLAAILIYVLLLVVIYLLIKRIRHKDKEYLEKLEKDIEKKTREINK 249 Query: 210 KEKRAFTLSWLAALSVLLLLLCT-------------PYENDFIAGYLVPVFFIIFTLGVG 256 +++ TL ++ +L++ T + + F Sbjct: 250 QKETFETLFEKSSDGILIVDGSTFIECNEKMVEILKYDSKEKLLNMHYTSMVPKFQPDGR 309 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRS 315 + + +++ ++ L ++ ++ +VR Sbjct: 310 NSYEKSKEMVLLAKKYKGYQFECVYIRADGEKFLAEVTLTPIMLGKRHVIYTVVRDISDK 369 Query: 316 EWLNRRW-------HLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNL 360 + + H QA D LT LPN E + + +DN Sbjct: 370 KKAQQELLKQKDILHHQAHHDALTGLPNRTLFSDRLEHGLKLAERHLGKLALFFIDLDNF 429 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + + + L +++ + L +L G E +++ + ++ + Sbjct: 430 KQINDSLGHQIGDKVLVVVSKRLKAKIRQEDTLARLGGDEFTIIMENFKDVQQVSVLAQK 489 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + ++ +H L + + + + L+ ++ Sbjct: 490 IQKVLNQPMHIEGHTLYISCSIGISFYPQDTQNANDLVKYADAAMYKAKEEGRN-NFQFY 548 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMT 534 ++ ++V++ ++R A+ + +LY QP N G + ++ G++ Sbjct: 549 STEMTTLAYERVVMEASLRQAIKNEEFILYYQPQVNAQTSRMTGMEALIRWEHPHLGMIL 608 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGRI 593 PDKF+PL + L D V+ + +K + P S+NL L +N I Sbjct: 609 PDKFIPLAEESGLILEIDRWVMRTAMKQVREWYARGLDPGVLSLNLSMRQLKDENFIDVI 668 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 P+ + E+TE Q + ++ ++ ++ G IAIDDFGTGY++ LK Sbjct: 669 KEYLHMMSFEPEWLEFEVTEGQMMKRPDDAVASLGEIKSMGISIAIDDFGTGYSSLGYLK 728 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 RL +KID F+ I + +A IV++ LAK+ SLS++AE VE ++Q+ L G Sbjct: 729 RLPVSRLKIDQSFIHGIPEDRENAAIVKATIALAKSLSLSIIAEGVENEEQKEFLLFNGC 788 Query: 714 QYLQGYLIGRPQPLA 728 +QGY GRP Sbjct: 789 ISMQGYYYGRPMTAD 803 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 102/550 (18%), Positives = 196/550 (35%), Gaps = 27/550 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + S +E+ A + ++ +L + GY G+ Sbjct: 264 ERRASAEREQLAQKVYSHTPAGIIFTDDQHRILSINPATTEMTGYEPFELIGQTVFGLIS 323 Query: 258 LRYPFLN--LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRI 311 L +S + Q + + + + ++++ Sbjct: 324 LDEGISQKDFQEQISMRGSWSSELEVTQKNGSNFPAGARINRVDDPQSGLPAHYVWILAD 383 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + R A D LT LPN AL + + +D + + Sbjct: 384 ITERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFIDLDRFKII 443 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + G + +R + L L++E + + +L G E +++L + + + Sbjct: 444 NDTLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGKIIS 503 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 S I L F + +L + A Sbjct: 504 ALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRN-NYQFFAAD 562 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 ++ +++ + +R A+ + +L L QP + G + +L G+++P + Sbjct: 563 MNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPAR 622 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + + VL + +A R +VN+ L +++ + Sbjct: 623 FIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVANA 682 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + + LEITE N + +++ +E+L + G +AIDDFGTGY++ LK Sbjct: 683 LTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFP 742 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV DI + D I LA + L+V+AE VET+ Q LL G + Sbjct: 743 IDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEV 802 Query: 717 QGYLIGRPQP 726 QG+L +P Sbjct: 803 QGFLFSKPLT 812 Score = 44.6 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 7/148 (4%), Positives = 23/148 (15%), Gaps = 21/148 (14%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP--------------YENDFIA 240 + + + T+ +V L Sbjct: 133 TDITDRKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTAFPRLLDVPAELAKP 192 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFILAVL 298 G + F + + + ++ + + + Sbjct: 193 GVSMETLFRFNAMRGEYGPGDPEKIVATLMERAKNPSHHYFERTRPNGKTLEV----RGV 248 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + R A Sbjct: 249 PLAEGGFVTVYTDISERRASAER-EQLA 275 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 105/568 (18%), Positives = 205/568 (36%), Gaps = 30/568 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + R I A+ + ++ + + + G+ Sbjct: 284 GVIRDITGSKHAEEMICTLSLAVEQSPA---MIAVTDTDG---RIDYINPKFCKVTGFEP 337 Query: 245 PVFFIIFTLG-----VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + L L A+++ + + + + L+ + Sbjct: 338 EEVLGKNLIDIIQPGGESLSMADKTLWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIK 397 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 F L ++ + R H A D LT LPN ++ Sbjct: 398 SNEGFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQ 457 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + ID + ++ G ++ I L ++E + + + G E +L+L+ Sbjct: 458 MLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEI 517 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + ++ L + + G+ T + LL S Sbjct: 518 SRMEDANDVTQRILKKLKEPVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYIS 577 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 V + +Q+L +R AL+ +L+LY QP N G + + Sbjct: 578 KESGRD-NYHFYSSTVQEKAYEQLLEEMYLRRALENRELVLYYQPQVNIATGRLVGMEAL 636 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 L G+++P +F+PL D VL + K +VN+ Sbjct: 637 LRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISG 696 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 T ++N+ + + +SP A+ LEITE A N ++++Y + +L G +I IDD Sbjct: 697 HTFGRENLIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDD 756 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG+++ L + +KI F+ ++ + ++ IV+++ +AK+ L+V+AE VET Sbjct: 757 FGTGFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVET 816 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L L QGYL + + Sbjct: 817 DEQFEFLQGLQCDEFQGYLCSKAVTSEE 844 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 715 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 110/611 (18%), Positives = 215/611 (35%), Gaps = 38/611 (6%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 SF P+ + + I ++ + L M + + + + Sbjct: 372 SFVIIPIFVHAHWWGVIMIERDHAASTVTSQELGALMSIGRSFGVAIQRESSDHRLHQA- 430 Query: 205 APSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKL- 258 A + + + I GY + Sbjct: 431 ----------KIAFESTAEGIFITDDELRTIAINQGFTDITGYTEDDVLGNIPNVLEADL 480 Query: 259 --RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 P + A++ + +Y+ L + + + + Sbjct: 481 KKPEPHREIWKALTREGRWRGEFWNQRKNNEQYAEWVTLTAVNNEEGKVINYVGVFADIS 540 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSR 365 + R + DPLT LPN R + + + + + +D + ++ Sbjct: 541 EIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEIALLFVDLDRFKAIND 600 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G M + + + + +++++ + +L G E ++++ + + S Sbjct: 601 TLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLREREDAAKVAKKIISSL 660 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + L + + + + L+ Q +S Sbjct: 661 QNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKN-NHCFYSADLS 719 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 ++ L N +R AL + +Y Q + G + ++ + + G+++P KF+ Sbjct: 720 QNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFI 779 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L VL + SVN+ + + + N A + + Sbjct: 780 PLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILV 839 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + LEITE N E + +++ G R+AIDDFGTGY++ LKRL D Sbjct: 840 ETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLD 899 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 IKID FV+D+ N+ DA I +I +A++ +V+AE VET+QQ + L K+G Q QG Sbjct: 900 KIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQG 959 Query: 719 YLIGRPQPLAD 729 YL RP ++ Sbjct: 960 YLYSRPVTASE 970 Score = 42.6 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 12/154 (7%), Positives = 29/154 (18%), Gaps = 17/154 (11%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII---- 250 L + + L + + +G + + Sbjct: 107 QDVTERFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNGVNTQG 166 Query: 251 --FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL-------AFILAVLISF 301 + + L E L I L Sbjct: 167 KTDRELADLTHPNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKVPLFHD 226 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQ-ALTDPL 331 ++ + R + + + + A+ D L Sbjct: 227 DGSRHGIVTLGRDITDRKQVESQLRQRSAILDAL 260 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 715 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 95/585 (16%), Positives = 192/585 (32%), Gaps = 29/585 (4%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 ++ + + + A+ + A + Sbjct: 366 WMEEQGRGVSTDSTGLTIEGYIEDVTERIEAENRLNQAAAVFRSTGEGVAITDQN----- 420 Query: 226 LLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 ++ I G+ + N+ + Sbjct: 421 -GTIVDVNEAFTKITGFDRDEVIGKNTRILQSGKHDIAFYENMWEQIQKHGHWRGEVWNR 479 Query: 283 QGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 T Y ++ + + + + R A D LT LPN Sbjct: 480 AKSGTIYPEILTISAIDFKKGQQPSGYVGVFADITSLKETEARLDHLAHYDALTELPNRL 539 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + ++ + L +D + ++ G + + I L +++ Sbjct: 540 LFRERLIHSLLMSERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMG 599 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 + + ++ G E L+L + + +V + S + I N+ L + N Sbjct: 600 DTVGRISGDEFCLILEDIQDVTDVVPIVEKILSVFSQTIQINSHMLQISASIGVAISPDN 659 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 LL ++ ++ Q + + + +R AL+Q + Sbjct: 660 SNDADALLSFSDSAMYEAKEAGRN-TYKFYTAEMTQQALEHSFVQSALRDALEQSQFFVT 718 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ + G++ PD F+P+ L +L + + Sbjct: 719 YQPQLRIKDYSMVGVEALVRWQHPERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGV 778 Query: 565 THPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 ++ R VN+ L ++ +I K + + LE+TE + + + Sbjct: 779 QWLNEQVNFGRIYVNVSATQLHDESFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHA 838 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + + G +AIDDFGTGY++ LK+L D +KID F++DI + D I ++ Sbjct: 839 INVLSSFKEIGIELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAV 898 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + KA +L V+AE VE+Q Q L +QGYL P Sbjct: 899 IAMGKALNLEVIAEGVESQIQADFLLDKECTEVQGYLYAHPLTAD 943 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 6/134 (4%), Positives = 25/134 (18%), Gaps = 11/134 (8%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFT 252 E+R + + + ++ + G + Sbjct: 138 AIAEKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSEDLVGSNFLDL 197 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMV 309 + G N++ ++ + + + + + Sbjct: 198 IPEGDRPALISNISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFNRQGEIESYQSIG 257 Query: 310 RIYHRSEWLNRRWH 323 + R Sbjct: 258 EDITQRMIQERALE 271 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 715 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 112/554 (20%), Positives = 213/554 (38%), Gaps = 32/554 (5%) Query: 207 SLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVGKL 258 + + T+ + V++ ++ I GY Sbjct: 167 LIDQRDLLETVFESSYSGVMITDAKGNIVEVNPAFTRITGYQSEEVQGRNPHLLASGRHD 226 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRS 315 + + + + Y + + S + + + Sbjct: 227 HTFYREMWDDILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGIFSDVTKR 286 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHY 367 + + H A DPLT LPN R L + +Q + L +DN + ++ Sbjct: 287 KEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFKTLNDTK 346 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----EGRLQHMVNIL- 421 G + + + + L ++ + + +L G E ++VL + + + + Sbjct: 347 GHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAATQADLVAEKIR 406 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S+ N F G+Q++L+ +L Q+ A+ + Sbjct: 407 YALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAGRN-AIRFYDP 465 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDK 537 ++ + L +R +++ L LY Q + G + +L + G+++P + Sbjct: 466 VMQASIEARAELEEELRQVVERNQLRLYYQVQMDSSNRPLGAEVLLRWQHPERGLVSPAQ 525 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIR 595 F+P+ + L VL++ L D +VN+ + ++ R Sbjct: 526 FIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQFRSMDFVSQVQR 585 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + P + LE+TE N E ++ + +L G ++DDFGTGY++ + LKRL Sbjct: 586 TLAQSGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTGYSSLQYLKRL 645 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IKID FV+DI +++ DA IV++I +++ L+V+AE VET+ Q+ L G Sbjct: 646 PLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQREFLDLRGCHA 705 Query: 716 LQGYLIGRPQPLAD 729 QGYL GRP PLA+ Sbjct: 706 FQGYLFGRPAPLAE 719 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 715 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 114/568 (20%), Positives = 204/568 (35%), Gaps = 35/568 (6%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R I A L R +E T + +L + GY Sbjct: 466 RDISEARKADELMRIAAIAFETQEAMLVTDAKS-------QILRVNRAFTEVTGYSAAEA 518 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---F 301 + +L ++ L + Y ++ + Sbjct: 519 IGQTPALLKSGYHEDSFYKDLWTSLKENGLWRGEIWNRRKNGEIYPEWLTISAVRGQHGE 578 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + + + AL DPLT LPN R L + Q + Sbjct: 579 ITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRLLNERLSKALTSSGRQRRHAALL 638 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP----- 408 + +DN + ++ G + +R + L ++ N+ + +L G E +++L Sbjct: 639 FIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGDEFVILLEELSPNIH 698 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + +++H+ + + + F ET++ LL ++ Sbjct: 699 DATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETIESLLKSADMAMYKA 758 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEIL 523 A + + + + L +R A + +LY QP + G + ++ Sbjct: 759 KAAGKNRLF-FFDPAMQTEVEARAALERDLRQAQREKQFVLYLQPQVDQSGHVSGAEALI 817 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMP 581 G++ P +F + + L VLE K L D ++N+ Sbjct: 818 RWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNPDTAHLTLAINVSA 877 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH-KFGFRIAID 640 L + + R + LEITE + + ++ ++ L + G +++D Sbjct: 878 LQFRNPDFVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERMQVLKNQLGVGLSLD 937 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK+L D IKID FVKDI N DA I ++ L ++ SL+V+AE VE Sbjct: 938 DFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALGRSFSLNVIAEGVE 997 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T +Q+ L G QGYL GRP P+ Sbjct: 998 TIEQRDALIARGCLTFQGYLFGRPGPID 1025 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 9/156 (5%), Positives = 31/156 (19%), Gaps = 15/156 (9%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYEND 237 L+ +++ A R + +L V + + Sbjct: 324 VGGLSTLLILSMLAVAYLIRSKRLVGAALRERASLLDSLGEGVYGIDQNGQCTFINPKAL 383 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLT--------WAVSTLCLLNYNQNFLQGVETEY 289 + G+ P ++ + + F + Sbjct: 384 EMLGWTADEVIGSDQHARFHHHRPDGSIYPSADCPVYQTLRDGQRRQGEEWFFNKDGRGF 443 Query: 290 SLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + + + R + + Sbjct: 444 PVQYSVTPISRQEDKEGAVVTFRDISEARKADELMR 479 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 96/620 (15%), Positives = 214/620 (34%), Gaps = 43/620 (6%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 I+ + ++S + I+ + L L + I + Sbjct: 619 IRSMVQGGFRRGAAEAEVSLQGSSSREIYLLTSRLFLLGGE----DCLITVGIDISARRR 674 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFI- 249 A+ + + + S+++ ++ GY Sbjct: 675 AEATL-----------ELWGRVFECTSESIMITDAAQRIVSVNQAFCATTGYRAEEIIGQ 723 Query: 250 --IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---C 304 + F L + ++ + Sbjct: 724 SSLALRSDVHDGIYFRQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTN 783 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 + + + +R A D LT LPN + + + Sbjct: 784 YIALFTDISAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFID 843 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D+ + ++ G + + + L +++ + + +L G E +++L+ E +++ Sbjct: 844 LDHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDSHQIEE 903 Query: 417 MVNI----LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ L + L F + LL ++ Sbjct: 904 IMKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRN- 962 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 E ++ + +++ + ++R +++ +LLL+ QP + + G + +L D Sbjct: 963 NYHFYTEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPD 1022 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G+++P +F+P+ + L QV+ + + L+ S+N+ + + Sbjct: 1023 HGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRR 1082 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +++L + +SP + LE+TE +A ++ +E L GF +IDDFGTGY++ Sbjct: 1083 FVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSS 1142 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L R D +KID F++ ++ D I+++I L + V+AE VE + + L Sbjct: 1143 LNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRAL 1202 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 G +QGY + RP Sbjct: 1203 RAAGCDGIQGYFVARPLTPE 1222 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 106/576 (18%), Positives = 197/576 (34%), Gaps = 23/576 (3%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL-SVLLLLLCTPY 234 + + R + + Q L + E+ + A + ++ Sbjct: 498 LAELADDIAFGIRTLRARVEQQQLAATLELRNRAIEESTNAIVISHADRAADNPIIYVNP 557 Query: 235 ENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 GY F + + L AV Sbjct: 558 AFTVTTGYGADEVLGRNARFLIDNDWDQPAVERLREAVREGGDARVTLRTYHKDGQLLWN 617 Query: 292 AFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 LA + + + QA D LT L N L Sbjct: 618 EISLASIRDAQGEVSHFIAIFNDVTERVRYEAELEQQATHDALTGLANRNLLNDRMQRAI 677 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + L +D + ++ G ++ R L ++ + + +L G E Sbjct: 678 IRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRRGDTVARLGGDE 737 Query: 401 LLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++V+S E + + + + N + + + E LL Sbjct: 738 FMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPRDGEAAATLLKH 797 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NK 514 ++ ++ + +++ L N++R AL+ +L L+ QP + Sbjct: 798 ADVAMYRAKELGRNR-FQFYAPEMNERILERLELENSLRRALENDELELHYQPKVSLRDG 856 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-P 573 G + ++ G+++P F+PL + L V++ + L Sbjct: 857 RVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQI 916 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ + + + R + + P + +E+TE E +++ + +L Sbjct: 917 SVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNI 976 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G RI++DDFGTGY + LKR D IKID FV D+ T+ DA I I LA + + + Sbjct: 977 GVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQT 1036 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VE + Q L + G +QG+L RP P A+ Sbjct: 1037 VIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAE 1072 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 109/568 (19%), Positives = 210/568 (36%), Gaps = 25/568 (4%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + I A + R ++ + L+ I Sbjct: 455 VIGVLGSYTDITERKRADLALRLQSRALDASVNAI-LITEPSKEGNLI--EYVNPAFKRI 511 Query: 240 AGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY + + + A++ ++ + + +A Sbjct: 512 TGYDPQEVIGQDCRLLQRDDRDQEGIAAIRQALAANREVSAVLRNYRKDGALFWNQLYIA 571 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + ++ + QA D LT LPN L Sbjct: 572 PVPDADGQTTHHIAVINDVTALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQR 631 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 G + + +D + ++ G + + + L + ++ + + G E ++V+ Sbjct: 632 HHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGDEFVIVM 691 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + E L + + S + + T L +G F + + + L+ + Sbjct: 692 TDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAM 751 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 ++ + ++ ++ L +R AL + LL+ QP + + G Sbjct: 752 YRAKDMGRN-TFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGM 810 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + ++ + G++ P +F+P+ + L VL + + P R SVN Sbjct: 811 EALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVN 870 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L Q++IA ++++ + + PQ + LE+TE NAE ++ + +LH G +A Sbjct: 871 LSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLA 930 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D +KID FV DI ++ D I +I LA + +L V+AE Sbjct: 931 IDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEG 990 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQP 726 VET Q L + +QGY +P P Sbjct: 991 VETSTQLDFLKERACDEMQGYFFAKPLP 1018 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 95/551 (17%), Positives = 197/551 (35%), Gaps = 32/551 (5%) Query: 210 KEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG-----------VGKL 258 + + L+ T F+ L+ V Sbjct: 22 SMEAFLLAALADNSPDLIYAKDTRGRFIFLNKTLMAVMGAQDLQDVLGKTDFDFNTPDNA 81 Query: 259 RYPFLNLTWAVSTLCLL--NYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + + + + + L + L + + + L+ + R Sbjct: 82 QNYYQDDQTVIQSGQPLINREEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDIT 141 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + A D LT LPN + + + + +D + ++ Sbjct: 142 ERKQSEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNIND 201 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + ++ ++ ++ + +L G E +++L E+ + + + S Sbjct: 202 TLGHDAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAA 261 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + + + + E Q L+ ++ + Sbjct: 262 IQPLDVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKN-NYQFYSPDLK 320 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 ++ ++++L N +R AL++ + L+ Q RN + G + ++ + G ++P F+ Sbjct: 321 VRSLERLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFI 380 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L VL + +VNL N+ I + Sbjct: 381 PLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALR 440 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++P+ + +EITE +AE ++ + + G R+AIDDFG GY++ +KR D Sbjct: 441 ESGLAPELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPID 500 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +K+D F++DI N D I +I + K SL+V+AE VETQ+Q+ L QG Sbjct: 501 TLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQG 560 Query: 719 YLIGRPQPLAD 729 Y +P + Sbjct: 561 YYFSKPVSPEE 571 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 121/706 (17%), Positives = 233/706 (33%), Gaps = 61/706 (8%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 ++ W L + + + A L++ +FW G Sbjct: 12 VSSFWIELLFTVVIMSLALFIRLAIAPVDAGLQYVTFFPA-------ITLAAIFW-GCRA 63 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY------- 185 + ++F P +F + I +L+ L +L+ + Sbjct: 64 GLLAMAMGVGFATYFFIP-PFYSFENEGLKIMAWSNLVFLVDGLLVSFSIEAMHRYRKKS 122 Query: 186 -------------LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 ++ + R L + ++L Sbjct: 123 EVELAEIKLAHSQVSTLNSELDEMLHKQRETEQELLISATAFEAQDGIMITDSKGVILRV 182 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 I GY + + + + + Y Sbjct: 183 NQAFTDITGYSSEEAVGQTPRLLKSGRHDADFYAAMWQCIKNTGQWSGEIWDRRKNGEIY 242 Query: 290 SLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------- 337 + + V + + R H A DPLT LPN Sbjct: 243 PKWLTITEVKSFDGSVVHYVSSQVDITARKASEDRIHNLAFYDPLTQLPNRRLLLDRLRH 302 Query: 338 -RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + + +D + ++ G + ++ + L ++ + + +L Sbjct: 303 SVSFS--LRDGRHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDTVARL 360 Query: 397 PGSELLLVLSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 G E +++L G E + + + + ++ G FD + Sbjct: 361 GGDEFVVLLDGLAGNLHEAAAQAKQIGRKIIDTLNQSYDLAGHEYQSGASIGIALFDEHC 420 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 +T + LL Q Q+ L + + +V L + AL Q + Sbjct: 421 QTAEDLLKQADIAMYQAKKAGRN-TLRFFDPEMQASILARVALEKDFKDALLQEQFYICY 479 Query: 509 QPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 QP+ + G + ++ GI++P F+PL + L VL++ + L+ Sbjct: 480 QPVISREGRVAGAEALVRWRHSIRGIVSPADFIPLAEETGLIVPLGNWVLKTACRQLSDW 539 Query: 567 --PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 D + +VN+ L Q++ ++ L + +P+ + LE+TE S+AES + Sbjct: 540 SSRDDTRDLTIAVNVSARQLKQEDFVTTVMGLIEETGANPRRLKLELTESMLVSDAESII 599 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L + G A+DDFGTGY++ L RL D +K+D FV++I T +I + Sbjct: 600 VKMNLLKEAGITFALDDFGTGYSSLAYLSRLPLDQLKVDQSFVRNIETEDSAVVICAATI 659 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHK-LGVQYLQGYLIGRPQPLAD 729 +LA L VVAE VE + Q+ L +LQGYL +P + + Sbjct: 660 NLAHNLKLKVVAEGVENEAQRYFLSSVHQCDFLQGYLFSKPVAIDE 705 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 117/744 (15%), Positives = 225/744 (30%), Gaps = 51/744 (6%) Query: 29 RFISPLAIIHSSYIFLAWMPLCVMLSILFIF------------GWRGVVPVLCGMFCTNL 76 + + L W+ L + + GW V +F L Sbjct: 9 IRYALRLAAVYALFGLLWIFFSDRLVLAISWDQESLTAMQTYKGWFYVAVTAILVFFLVL 68 Query: 77 WNFHLSFLQTAVMLGSQ------TFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 + + V + + + G V R + + Sbjct: 69 RAEYRFRRTEERFRNLTETSNDWIWEVDTSGSYTYVSPQVKTLLGYRPDEVIGRTPFDFM 128 Query: 131 VTPIGIKC---SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 + + + ++T + F + + Sbjct: 129 PSGEAERVRDRFAAISAEQEAIINLVNTNLHRQGRRVILETSGVPFYDQHGTWQGYRGID 188 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R I + R+ E +L I GY Sbjct: 189 RDITVRQQLEEWLRQSAMVY---ENMWEGAVITDPAG---TILDVNPAFSRITGYAKDEV 242 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISF 301 + + ++ + + Y ++ + Sbjct: 243 IGKNPRILKSDRHEQAFYQHMWRELIEKGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQ 302 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + + + + + A DPLT LPN L + Sbjct: 303 TSYYVGVFTDLSQLKQSEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAERHQTKVGVY 362 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D ++ + + + L ++ ++ L + G E +L+ Sbjct: 363 FIDLDQFRVVNESLSYQAGDQLLVMVSKRFLSCLRVDDTLARPGGDEFVLIQEALADPQE 422 Query: 414 LQHMVNILNS---RQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 L + + + + +G F G+ T LL + + Sbjct: 423 ATETARELLASLDQPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAEAAMYHAKENG 482 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE----GEGYDEILAR 525 E ++ ++ + +R A++ +LLLY QP G + ++ Sbjct: 483 RNR-FSFYAEQMNADALARLQMEMALRQAVENRELLLYYQPQWQLADSPSVIGAEALIRW 541 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTL 584 +G ++ PD+F+PL + L V++ + L K R +VN+ Sbjct: 542 RNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRVAVNVSARQF 601 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 N+A + + +++ I LE+TE E + + + G IA+DDFGT Sbjct: 602 RAGNLAEVVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVGIALDDFGT 661 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L R ++KID FV+D+ + A+I SI LA L VVAE VET++Q Sbjct: 662 GYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQ 721 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 +A L G QG+L P P Sbjct: 722 RAYLQSRGCDLAQGFLFSPPLPAE 745 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 109/567 (19%), Positives = 203/567 (35%), Gaps = 34/567 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R V A+ R +E T S +L GY Sbjct: 351 RTHVRAQLAETDLRIAATAFESEESMIITDSRGI-------ILKVNQVFTATTGYTSEEA 403 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SF 301 + + + + Y + + Sbjct: 404 VGKTPSLLKTDRHSAEFYHEMWRQIKQTGKWQGEIWDKRKNGEIYPKLLNIYAVKSKNGV 463 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + + A D LT LPN R L + Sbjct: 464 VTHYVGSYTDLTERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGALL 523 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG--PETE 411 + +D + ++ G + ++ + L ++E + + ++ G E +++L E+ Sbjct: 524 FIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIESV 583 Query: 412 GRLQH---MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + F N ++ L Q Q+ Sbjct: 584 EAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMYQA 643 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEIL 523 L ++ + + + L +R AL L L+ Q + + G + +L Sbjct: 644 KKSGRNK-LRFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSAHQTIGAEVLL 702 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMP 581 + GI++P +F+P+ + L L VLE+ L ++N+ Sbjct: 703 RWIHPVNGIISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINVSA 762 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q A + + +R+ I+P + LE+TE +N + ++ + L +FG + ++DD Sbjct: 763 RQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDD 822 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ + LKRL +KID FV+D+ T D IVR+I +A + +L+V+AE VET Sbjct: 823 FGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVET 882 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 + Q+ +L K + QGYL G+P P+ Sbjct: 883 EIQRQILLKNQCSHFQGYLFGKPMPIE 909 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 102/610 (16%), Positives = 211/610 (34%), Gaps = 28/610 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 ++T + F L L ++F +L+ + + + + + Sbjct: 15 LLMLGSVATIHLASLYYFEGESLSWPILTTLSIAVIFAFLSLIQIRLNRQLAAKVKALHE 74 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGV----GK 257 K K+ + + S+++ + + GY F + Sbjct: 75 RDFKLKKLSSAVTNSGCSIIITDRLGRIEFVNNKFVNVTGYGQEEARGRFLDILNPKDMD 134 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHR 314 P + + + ++ A ++ + + + Sbjct: 135 AEKPQEQIWESDILYDGWEGEVLSRRRDGYDFWWAVTVSTVCDSDNTVTNYVISGVDVSE 194 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRH 366 + NR+ AL D LT L N R EQ + L +D + ++ Sbjct: 195 LKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDT 254 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--- 423 G ++++ + L ++ + + +L G E ++L+ + + + Sbjct: 255 LGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALK 314 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 I + + + L+ ++ H E ++ Sbjct: 315 EPIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRDR-YHFYTEELNA 373 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 KQ+L+ +R AL + L QP N + + ++ G++ PD F+ Sbjct: 374 HALKQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFIS 433 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + L VL++ + + +VNL + I Sbjct: 434 VAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNE 493 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P+ + LE+TE + ++ +++L + G +AIDDFG+GY++ LK+L + Sbjct: 494 TGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNA 553 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +K+D FV+DI ++ D I +I +A L VVAE VET +Q+ L + QGY Sbjct: 554 LKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGY 613 Query: 720 LIGRPQPLAD 729 +P D Sbjct: 614 FFSKPLSFED 623 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 109/579 (18%), Positives = 217/579 (37%), Gaps = 34/579 (5%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 L + +R I ++ + +E T + +L Sbjct: 552 LHGKPALFNSSRDITERKKIEVEIQIAATAFEAQEGMLITDADRN-------ILRVNRAF 604 Query: 237 DFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 I GY + + + + + Y Sbjct: 605 TDITGYSAEEVIGKNPRILSSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNGEVYPERL 664 Query: 294 ILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 + + + + + A DPLT LPN R L +Q Sbjct: 665 AITAVKDARGVVINYVASLSDITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALVA 724 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + L +DN + ++ G + ++ + + L ++E + + ++ G E + Sbjct: 725 SSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGGDEFV 784 Query: 403 LVLSG-----PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 ++L E + + + + S + H + FD + + L Sbjct: 785 VMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFEVHSTPSIGATLFDSRPQIIDDL 844 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 Q Q+ + + + + L +R ++++ + L+ Q + Sbjct: 845 FKQADIAMYQAKKAGRN-TMRFFDPQMQDTLNTRTALEADLRKSIERREFNLFYQIQVDE 903 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--K 570 G + ++ + G+++P +F+PL + +L L VL+ L T + Sbjct: 904 MNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLT 963 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + +VN+ Q + A ++ ++Y I P + LE+TE N E ++ + L Sbjct: 964 RNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMNAL 1023 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G + ++DDFGTGY++ + +K+L + +KID FV D+ + D IVR+I +AK+ Sbjct: 1024 KEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSL 1083 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VETQ+Q+ LL G + QGYL +P P+ + Sbjct: 1084 QLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIRE 1122 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 19/203 (9%), Positives = 48/203 (23%), Gaps = 13/203 (6%) Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 L + + V + D + + +A + VV + L L+ + L Sbjct: 257 RGELTAFRASRLYPFAVLTHIDRTRALQKWQAEAKTLLAVV-IPVLLAISLLAMAFYRRL 315 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 + A+ L R + + A ++ I GY Sbjct: 316 AQNEAQRREAERLQRINATVFDSSAEAIIITDLNAN------IISVNPAFTQITGYSPED 369 Query: 247 FF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + + L A+ + Y++ ++ + Sbjct: 370 VLGKNPRILSSGQQSKGFYRELWEALLRDNFWQGELVNRHKNGSLYNIHLSISASRDGTG 429 Query: 304 ---CLLYMVRIYHRSEWLNRRWH 323 + + + Sbjct: 430 QLQHFIGVTTDITERKQHESELR 452 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 10/164 (6%), Positives = 33/164 (20%), Gaps = 9/164 (5%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 + + + + ++ + + ++ L A+ + +L Sbjct: 417 IHLSISASRDGTGQLQHFIGVTTDITERKQHESELRMESEKNMVLLRNASDGIHILDPDG 476 Query: 233 P-----YENDFIAGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 + GY + + + + Sbjct: 477 NIIEASDSFCSMLGYQRNEMLGMNVCQWDADFSDPRIVKLFRDQFTNKGRTQFETRHRRK 536 Query: 285 VETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 T + L + L R + + + A Sbjct: 537 DGTVIDVEISGYPLQLHGKPALFNSSRDITERKKIEVEIQIAAT 580 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 105/553 (18%), Positives = 209/553 (37%), Gaps = 26/553 (4%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVF---FIIFTL 253 E+R L A + ++ + + GY + F ++ + Sbjct: 288 LLYEERQKSEERYRYLFQNANDPIFIIDRELKFINVNRRAMDLFGYGLDEFVAMNMVDLV 347 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRI 311 ++ L S L + N ++ + + + +++VR Sbjct: 348 PEEQIPRIQGELKKMESMEALDKLSTNIRTKWGYSLNVEISSSPFVERNNVMGSIHIVRD 407 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----QEAGK----SFCCLRIDNLEFM 363 S+ + QA D LT L N Q + L +D + + Sbjct: 408 VTESKKMEDEIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDLDRFKSI 467 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G ++ I L ++E + + ++ G E ++++ + N + S Sbjct: 468 NDSLGHAAGDKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAIANKILS 527 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + L + + + E + LL + Sbjct: 528 SMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRN-NYQFYNPA 586 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 ++ +T ++V + N +R AL++ +L++ QP + G + ++ L + G+++P Sbjct: 587 LNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLHPELGLLSPGH 646 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + D VLE+ + + +VN+ + ++ ++ R+ Sbjct: 647 FIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRRPDLVDQVRRV 706 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P+ + LEITE A + E ++ ++ L AIDDFGTGY++ LK+L Sbjct: 707 LNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSSLSCLKKLP 766 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID F+ + T+ D IV +I +A L V+AE VE Q LH+ + Sbjct: 767 IRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFLHQNHCDQM 826 Query: 717 QGYLIGRPQPLAD 729 QG+L RP P D Sbjct: 827 QGFLYSRPIPAED 839 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 103/575 (17%), Positives = 218/575 (37%), Gaps = 30/575 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEND 237 L + + + + A S+ + + A T+ + ++L ++ Sbjct: 705 LDELVQDV-AFALDVHEHEQQQAFSMKQLQLAATVFDNSREGIVLTDKNEKIVSVNRAFS 763 Query: 238 FIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 I GY R + N+ ++ + Y Sbjct: 764 DITGYRDDEVLGQTPRILKSNRHGRDFYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMS 823 Query: 295 LAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 ++ + + + +++ + + DPLT LPN +Q Sbjct: 824 MSAVCDDQQEVSHYIAVFTDISQAKESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHA 883 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + C +D+ + ++ +G ++ +R I L ++E++ L +L G E +L Sbjct: 884 ERKHHSFAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVL 943 Query: 404 VLSGPETEGRLQHMVNILN---SRQIHWN--NTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +L R+ M + + I + + + + + LL + Sbjct: 944 LLEDVADSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRA 1003 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 ++ H E ++ Q ++V L +R AL++ + +Y QP + + Sbjct: 1004 DSALYRAKQHGRAR-FAYYNEEMTEQAQERVQLSFHLRQALEKKEFAVYYQPQVDLGTGQ 1062 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPR 574 G + ++ + G++TPD+F+PL + +L + + Sbjct: 1063 IVGAEALMRWNSPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLT 1122 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VNL + +++IA R+ + + + LE+TE + ++ ++ L++ G Sbjct: 1123 LAVNLSAVQFAEEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELG 1182 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 R+A+DDFGTGY++ LK ++K+D F+ D+ + D +V +I + + Sbjct: 1183 VRLALDDFGTGYSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDL 1242 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET Q+ L +LG Y QGY P P + Sbjct: 1243 LAEGVETVAQRDCLAQLGCDYYQGYYCSPPVPACE 1277 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 111/557 (19%), Positives = 211/557 (37%), Gaps = 28/557 (5%) Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL---GV 255 + + + + +L I GY Sbjct: 347 AMQHMVENLKIAATVFESAEGMVVTDEKKHILRVNQAFTDITGYQPKDVLGHHIKVIRSG 406 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL----ISFSVCLLYMVRI 311 + + L + T + EY ++ + + + + Sbjct: 407 RHNQSFYDELELQLKTQGSWQGEIFNKRKNGEEYLQWTMITAVISDHEDEIINYVITLID 466 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + + A D LT LPN + L + + L +D+ + + Sbjct: 467 ITQRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTL 526 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH-----MV 418 + G + + + LL ++ + + ++ G E +++L +++ + + Sbjct: 527 NDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLC 586 Query: 419 NILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + S+ + +N F G + + LL Q+ Sbjct: 587 RKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRN-THR 645 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIM 533 + + + + N IR AL + + LY QP + + G + ++ G + Sbjct: 646 FFNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHPKQGTI 705 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAG 591 +P +F+P+ + L VL+ + LA ++N+ Q Sbjct: 706 SPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQ 765 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 +++ +RY +P + LE+TE + E ++ + QL K+G ++DDFGTGY++ Sbjct: 766 QVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNY 825 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL D +KID FV+D++TN+ DA I R+I LAK+ +L+V+AE VETQ+Q+ L Sbjct: 826 LKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASY 885 Query: 712 GVQYLQGYLIGRPQPLA 728 G QGYL RP PL Sbjct: 886 GCLDFQGYLFSRPVPLE 902 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 97/566 (17%), Positives = 194/566 (34%), Gaps = 24/566 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-LLLLCTPYENDFIAGYL 243 + R + S + K ++ ++ I GY Sbjct: 928 GVVRAVCSQSTDVTMKHHAEEQLRLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYS 987 Query: 244 VPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 F + + + ++ + Y + + Sbjct: 988 HQEVIGKNPRFLQSGKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRD 1047 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + + + RR A D LT +PN L Q+ Sbjct: 1048 ENGSVVNYVAIFSDISAIKSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTK 1107 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +DN + ++ G + ++ L +++++ L +L G E + VL+ Sbjct: 1108 LAVLFIDLDNFKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDV- 1166 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + ++ + + N+ L + F + + LL ++ Sbjct: 1167 SLEKVNSVAARIVDFLGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAK 1226 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 + + +++ L +R AL+ + QP + E G + +L Sbjct: 1227 ERGRNQ-YQFFADEMKVIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALL 1285 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPL 582 G ++P F+P+ L V +L+ +A R ++N+ Sbjct: 1286 RWRDPTLGEVSPAHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAH 1345 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L A ++ IS + + +E+TE + + G +++IDDF Sbjct: 1346 QLRDAGFAAKVGSWLDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDF 1405 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+L +KID FV I D I ++I D+++A + VVAE VE++ Sbjct: 1406 GTGYSSLSYLKKLPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESE 1465 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q +L + G +QGYL RP Sbjct: 1466 EQLGVLKEEGCDMVQGYLFHRPLSPE 1491 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 124/751 (16%), Positives = 241/751 (32%), Gaps = 46/751 (6%) Query: 6 NLIKNIKIFTLAFTLTVVLIQLSR-FISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV 64 ++ I+ F + + + S +A + + +S+ Sbjct: 54 AVVAGCGIWATHFIAMQAYGPGAGGAYNIPVTVLSLIFAIAVTFVGLSISV----SATRT 109 Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 +PV G + + + + LG + + V R Sbjct: 110 IPVALGGAVVGGGVAAMHYTGMMALEIPARIGWATDTVAVSIVLGIVFGSL--ALVVAGR 167 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + + ++ +V F + + I + + + + + Sbjct: 168 RDGVANALGATVLLTVAIVSHHFTAMGAVELTPDPSIVISGLSIPPASLSVLTASAAVAI 227 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT------------ 232 + + RR ++ T + + + Sbjct: 228 IAIALAAAVLD-----RRAKGELGRQQVVLDTALENMSQGLCMFDADGKIMLFNERYAAM 282 Query: 233 -PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + + G L+ V + + Sbjct: 283 LRRTDIALTGRLLVDVLREEQAKGQWQGDADEFFARLVIDAREGRTTSQVVNRLGR---- 338 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-- 349 + + + + A D LT LPN + EQ Sbjct: 339 SIRVVNQPMQGGGWVATFEDITEWLEAQAKISHMARHDALTGLPNRVLFHEQLEQGLRRT 398 Query: 350 -----KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + CL +D+ + ++ G + ++ + R L + E++ + +L G E +V Sbjct: 399 GSGDQLAVLCLDLDHFKDINDSLGHPIGDALLKEVGRRLKATVGESDTVARLGGDEFAVV 458 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 G E + + L S ++ + +G + LL Sbjct: 459 QIGRSEEAAARCLAGRLVEVISAPYEIDDHQIVIGVSIGISLSPQDGSNADELLKNADLA 518 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 ++ A E + + + LL +R AL + + Y QPIR+ Sbjct: 519 LYRAKADGRG-TYRFFETGMDARAQARRLLEMDLRAALQRDEFQPYYQPIRDVASGRVVV 577 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 ++ +L G++ P F+PL + L + VL S AT P +VN Sbjct: 578 FEALLRWNHPQRGLIAPINFIPLAEETGLIVQLGEFVLRSACTDAATWPD---DVDVAVN 634 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P+ N+ + + + + LEITE N+E+++ + +L G RI+ Sbjct: 635 LSPVQFRNPNLIASVTAALTVSGLPARRLELEITESVLLQNSEATLTTLHELRAMGVRIS 694 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L+ D IKID FV ++ T I+R++T L ++ + AE Sbjct: 695 LDDFGTGYSSLSYLRSFPFDKIKIDRSFVSELATREDSMAIIRAVTGLGRSLGIVTTAEG 754 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VE Q LL + G QGYL +P+P +D Sbjct: 755 VENDAQLELLRREGCTQAQGYLFSKPRPASD 785 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 129/735 (17%), Positives = 245/735 (33%), Gaps = 29/735 (3%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCG 70 + ++ + + F+SP I + V ++L F + G Sbjct: 1 MGVYCVMAGGFFYFSRFGLFLSPSQHILLLAA----LAAVVCYNLLLQFSRDRLA---RG 53 Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 N L + +V++ + + R VW GL Sbjct: 54 FRLLNFLQIILDLVLVSVLIHTSGGAASWFWPAYLFVTIEASFLIEDRREVWLVGGLGGL 113 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 + + + + P S D + +SL A + ++ M Sbjct: 114 LYGAVLVLEHLNIVPYVRMPFVGSELHHDHLYLLLTWLWVSLLNAAMAAIASYF----MT 169 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 V + + + + + + LL + + Sbjct: 170 VIRRETDAVREGEERLATFLDTANDLIHSVTPDGRLLYVNEAWQRTLGYSAEEADAVPFF 229 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY--M 308 L L VS L F + L+ + + Sbjct: 230 DILHPDSREQCCAELQRVVSGDALSPMEAVFTAKDGRSVIVEGSLSCAHGGDESSVIWSI 289 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNL 360 R + + + A D LT LPN +Q + L +D Sbjct: 290 CRDITERKHAEEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLDLDRF 349 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + H ++ + + ++E + + ++ G E ++L +T ++ M Sbjct: 350 KIINDTLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILVNVDTVEDVKRMGQK 409 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + + L + F + + L L+ + + Sbjct: 410 ILKTLAAPFNIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRN-NVQFY 468 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + K++LL ++R ALD + +Y QP + K + ++ G+++ Sbjct: 469 SPQMDANADKRLLLETSLRKALDNREFRVYYQPKVDIVSKRITAMEALIRWDHPILGLVS 528 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+PL + L VL + R +VNL QKN+ I Sbjct: 529 PGEFIPLAEETGLIIPIGEWVLRAACFQNCEWVRQGIPPMRVAVNLSGYQFQQKNLLETI 588 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + ++ + LEITE N + ++ + QL G I+IDDFG GY++ LK Sbjct: 589 RGILDETGLTADLLELEITESVIMQNPDFAVSVLNQLRDLGVHISIDDFGIGYSSLAHLK 648 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R + +KID FV+D+ N+ DA I +I + + +L V+AE VET+ Q + L Sbjct: 649 RFSVNTLKIDKSFVRDVEINSADAAIATAIIAMGNSLNLKVIAEGVETEGQLSFLSDNKC 708 Query: 714 QYLQGYLIGRPQPLA 728 +QGYL P P Sbjct: 709 DEVQGYLFSTPMPPE 723 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 102/602 (16%), Positives = 207/602 (34%), Gaps = 39/602 (6%) Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 A V + ++ F + I ++ R+ Sbjct: 482 RVRTAAGEYLWVENHVTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAA---------- 531 Query: 215 FTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLT 266 + +++ ++ + GY + + + Sbjct: 532 -IVFESTREGIVITDAERNIIKVNRALIDLFGYPENELLGQRPRIFHSGKHDGHFYQQML 590 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWH 323 A+ + + + + + + + + + R Sbjct: 591 QALDEHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYISIYTDISQLKDSEARLE 650 Query: 324 LQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 AL DPLT LPN L Q + + L +D+ + ++ +G Sbjct: 651 HMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDEL 710 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNN-T 431 + + L ++E++ + +L G E ++L + + + + + +N Sbjct: 711 LHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFLLSNAR 770 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + +G + + T + L+ Q ++ E + + ++ L Sbjct: 771 EVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRD-GYRYFSEELFLKAKARLEL 829 Query: 492 LNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 + A+ + ++ QP + + G + +L + G++ P +F+ + + L Sbjct: 830 EQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLI 889 Query: 549 ARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 VL + +VNL PL L ++ I + + Sbjct: 890 QNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHL 949 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LE+TE E ++ ++ L + G RIAIDDFGTGY++ LK+ D++KID FV Sbjct: 950 ELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFV 1009 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +DI D I +I + + L+V+AE VET+ Q L + G Y QGYL P P Sbjct: 1010 EDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPA 1069 Query: 728 AD 729 + Sbjct: 1070 EE 1071 Score = 52.7 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 11/167 (6%), Positives = 33/167 (19%), Gaps = 12/167 (7%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK-RAFTL---SWLAAL 223 ++ + +++ + A I + SW Sbjct: 369 EVRATLNDMVMDVTYALDMLLQAKERANALIALQNAAEVIDASPTILFRWQPNSSWKMEY 428 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS-TLCLLNYNQNFL 282 + +DFI G + L L+ + + + Sbjct: 429 VSSNVQRWGYQADDFINGK----LTMSDLLHPEDLQRVWAEVIHHIETRHKEYILECRVR 484 Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQA 326 + + ++ + + + A Sbjct: 485 TAAGEYLWVENHVTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAA 531 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 16/223 (7%), Positives = 48/223 (21%), Gaps = 8/223 (3%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 ++ ++ + + S + + D++ V L + T + Sbjct: 3 SATAQIPLRTATRIMLFYTVLSVAWFYFSGYSLSPSATKGAPPFDSLTFWVSLTTFITGI 62 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 + + + A + L L + L Sbjct: 63 TVGVFFLLVWRQHYMQHRQALSRRVAEKDRLLHHFFDLPLLGMAITTNANGSWLRFNDHL 122 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLN----LTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + + L + + + + F++ + Sbjct: 123 STLFNLSRDELAELNLLALTHPDDRPYDRQEWMRMQDGESQGYRREKRFVRPDGSMLFAL 182 Query: 293 FILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQAL-TDPL 331 + C++ ++ + R Q D L Sbjct: 183 VDTRCIRHPDGSIDCMINVIEDISARKNSELRLIRQNNLYDML 225 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 116/592 (19%), Positives = 221/592 (37%), Gaps = 34/592 (5%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + L I + R A +E T Sbjct: 422 AHLLEMTRVRLHDSANNVTGLIGLAADITERQKVESELRIAAAAFEAQEGMLITDRHNV- 480 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 ++ I GYL F + ++ ++ Sbjct: 481 ------IMRVNQAFTSITGYLAEEVLGKNPCFLASGRHDAGFYQSMWEGLNEKGKWEGEV 534 Query: 280 NFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + Y +++ + + R ++ A DPLTLLPN Sbjct: 535 WNRRKDGEIYPEYLLISAVKDIKNEVANYVATFRDITANKAAESEIKKLAFYDPLTLLPN 594 Query: 337 FRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 R L + + +DN + ++ G M ++ + L ++ Sbjct: 595 RRLLTDRLNHALASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIR 654 Query: 389 ENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 E++ L +L G E +++L + + + + + + + + Sbjct: 655 EDDTLARLGGDEFVVILENLSELAMDAATKAELIGEKILAALNQVYPLASQEYHGAASIG 714 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F G+ ++ L+ Q QS L + ++ L +R A+D Sbjct: 715 VTLFAGHALSIDELMKQADIAMYQSKKSGRN-TLRFFDLDTQKIINERAELEIELRKAVD 773 Query: 501 QGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + L L+ Q N + ++ + G+++P F+PL L VL++ Sbjct: 774 KKQLHLHYQIQLNSVGTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDT 833 Query: 559 LLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 L + ++ +VN+ QKN + +R+ I+P+ + LE+TE Sbjct: 834 ACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESML 893 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N E + + L + G + ++DDFGTGY++ + LKRL + +KID FV+++ +++ D Sbjct: 894 VENIEDIIVTMNALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSD 953 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IVR+I +A++ +L+V+AE VET++Q LL +G Y QGYL G+P P+ Sbjct: 954 RAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIE 1005 Score = 70.8 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 20/354 (5%), Positives = 78/354 (22%), Gaps = 30/354 (8%) Query: 31 ISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN---LWNFHLSFLQTA 87 ++ ++ +++ W + + + ++ V + Sbjct: 26 LTASMLLAIILVYIQWDVVSHDVLVGWLILLEAVQLARMALVVRYQRNATVAEEVISARL 85 Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYG---LTSRYVWQRLFWLGLVTPIGIKCSMYLVG 144 + V + L + + + + ++ Sbjct: 86 MRFRFGVLVSGVIWGGASFLLFPQENLPHQMFLIFMLAGLTTASVVSYSADLVSAVIFAL 145 Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 S + D + +++ + + + R ++ + Sbjct: 146 SIVTPLIARLLIVSDE---LAMAMAIAVLLYLGFLMVSLRLINRNLIENIRMRHEGELRE 202 Query: 205 APSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 A ++R L + + + ++ + G V + + Sbjct: 203 AAMNVSKERYRLLLAHSPVGIFHYDLNFVITYCNARFAELIGCPVAQVNGLDLYNLSDNA 262 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSE 316 + +A A ++ +V H + Sbjct: 263 VLPALTAALAGDRGYFEGQYQAVFNDG---WIAMTCAASCDARGNVIGGIAIVESIHERK 319 Query: 317 WLNRRWHLQAL--TDPLTLLPNFRALEQAPEQEAGKSFCCLRIDN-LEFMSRHY 367 + D + + + L +D ++F++ + Sbjct: 320 MAEMALA-LSNQKHDE-----ERKLFQTILDN-LPLGMWMLGVDGKIKFVNETF 366 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 99/553 (17%), Positives = 197/553 (35%), Gaps = 28/553 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 + + + A + ++ ++L+ ++ + + GY Sbjct: 368 EQKRAEESLRLAAMVYENSSEAILVTDADNLIIAVNPAFEQMTGYAAAEVLGKNPRIFKS 427 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRI 311 R + ++ A+ T + + EY + V+ + + + Sbjct: 428 GRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRDDDGAIYRHVALFTD 487 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + + QA D LT LPN + EQ + + +D + + Sbjct: 488 ITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGLSMALLLIDLDRFKEV 547 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + G + R + ++E++ + +L G E +++LS E + + + Sbjct: 548 NDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSELEDMASIDRVAQDILG 607 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + + L L + + + Sbjct: 608 SLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYVAKYAGRNR-FNYFTKD 666 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + ++ L N +R A+ G +Y QPI + + + ++ G+++P + Sbjct: 667 MQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAE 726 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L V ++ + + SVN P+ Sbjct: 727 FIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQISVNKSPVQFRHAESLS-WPEY 785 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++ H+S ++I+EITE + + G ++AIDDFGTGY++ LK Sbjct: 786 LEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAIDDFGTGYSSLSYLKEFD 845 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV+++ T D + +I +A V+AE VET Q LL G Y Sbjct: 846 IDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVETSTQHELLAAAGCDYG 905 Query: 717 QGYLIGRPQPLAD 729 QGYL RP P + Sbjct: 906 QGYLYSRPLPPEE 918 Score = 64.2 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 13/141 (9%), Positives = 29/141 (20%), Gaps = 8/141 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFF 248 + A L KE + AA L+ L ++GY Sbjct: 240 QRDITKRKLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREELI 299 Query: 249 IIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + + + L ++ + + + + Sbjct: 300 GMSIPELDAIDNSELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGRC 359 Query: 306 LYMVRIYHRSEWLNRRWHLQA 326 + L A Sbjct: 360 FVFSTDLTEQKRAEESLRLAA 380 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 8/139 (5%), Positives = 27/139 (19%), Gaps = 12/139 (8%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + A R + + + + T + + + GY Sbjct: 118 DVTEDKKAAAALRLQSQIVENAVEGIVLIKASDS-----TIQYTNRQFETLFGYAPGELI 172 Query: 249 IIFTL-----GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 G + + + + + T + + + Sbjct: 173 GKHISIINAPGNKSQMETAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPEL 232 Query: 304 C--LLYMVRIYHRSEWLNR 320 + R + + Sbjct: 233 GDLWIGYQRDITKRKLTEA 251 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 91/579 (15%), Positives = 199/579 (34%), Gaps = 28/579 (4%) Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 + + + + + ++ + + Sbjct: 511 RVVEISWEQETAYLASLTDVTDFKKTEDQLKMFSRACDQSPV---SIVITDSEGD---IQ 564 Query: 231 CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + + I GY + L +++ + + + Sbjct: 565 YVNPKFEEITGYKAGEVIGQNPRILKSGYTTEPEYDVLWRQITSGKQWSGEFHNKKKNGE 624 Query: 288 EYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + + + + + + QA D LT LPN + Sbjct: 625 LFWEHASICPMRDEEGYITHFIAVKEDITQQKHNEEILAHQANYDALTDLPNRTLIFDRL 684 Query: 345 EQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 Q + + + +D+ + ++ G + ++ L +++ + + +L Sbjct: 685 RQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRL 744 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E LL++ + + +++ N + + + + + + + Sbjct: 745 GGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQDGKNVST 804 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L+ + + ++ + ++++ N +R A+ + +L + QP + Sbjct: 805 LVRNADTAMYAAKQEGRN-VFAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVYQPFIH 863 Query: 514 K---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + ++ + G + PD+F+ + + L +L + +A Sbjct: 864 LNTSQIVGAEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVANWHQQG 923 Query: 571 KG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ P L N+ II +S + LEITE I+Q Sbjct: 924 NNGLWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQSLIKQ 983 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L+ R+AIDDFGTGY++ LKR ++KID F+ D+ + +V+++ +A Sbjct: 984 LNHLKIRLAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHG 1043 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE +ET Q L G Y QGYL +P P A Sbjct: 1044 LGLVVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPA 1082 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 7/122 (5%), Positives = 24/122 (19%), Gaps = 11/122 (9%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 A E R T+ + ++++ G+ Sbjct: 430 AEAALRESEARLRTIISTSTNGLVVVNRKGRALF----------INPAAEALFGRPASQL 479 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRR 321 + + + L+ + + + L + + + Sbjct: 480 EGELIGIPLVTKESTELEILRQDGQLKIVRMRVVEISWEQETAYLASLTDVTDFKKTEDQ 539 Query: 322 WH 323 Sbjct: 540 LK 541 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 710 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 118/594 (19%), Positives = 219/594 (36%), Gaps = 43/594 (7%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 VD S + I + ++ + +L Sbjct: 453 VDYSSHPIRSHGEMEGAVVVFEDISERRQKDEALKLAS-----------SVYQSSNDGIL 501 Query: 227 LL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + +L I GY + + + ++ Sbjct: 502 VTDEKNRILDVNPAFTRITGYTLEDVRGKDPGIFQSGKHDAQFYQQMWQSILDDGHWQGE 561 Query: 279 QNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 L+ ++ ++V+ + + + QA D LT LP Sbjct: 562 IWDLKKNGELHAKWLSISVIRRADGSIYRHVGQFSDITEKKRKDELIWEQANFDTLTNLP 621 Query: 336 NFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R Q + L +D + ++ +G M + + R L + Sbjct: 622 NRRLFADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCV 681 Query: 388 QENEKLYQLPGSELLLVLSGPETEG-----RLQHMVNIL---NSRQIHWNNTGLDMGYGA 439 +E + + ++ G E L++L+G +E R + + + R + T Sbjct: 682 REEDTVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSI 741 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F G+ + + LL + QS A A+ + + K+ L +R AL Sbjct: 742 GIVLFRGHSDDPERLLAHVDTAMYQSKAKGRN-AICFFDSSMQEILEKRGQLETALRGAL 800 Query: 500 DQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 ++ + LL+ Q + G + +L G ++P +F+P+ + L VLE Sbjct: 801 ERKEFLLHYQLQMDSSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLE 860 Query: 558 SLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + LA +VN+ + + ++ + ++ I P + LE+TE Sbjct: 861 TACAQLARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESL 920 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + S+ +E L G + ++DDFGTGY++ L RL D +KID FV+DI T+ Sbjct: 921 VLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQH 980 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV++I +A + + V+AE VET++Q+ L G Q QGYL +P P+ + Sbjct: 981 DAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEE 1034 Score = 58.1 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 16/164 (9%), Positives = 37/164 (22%), Gaps = 16/164 (9%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----L 230 L+ +L +VS F R+ + E+R + + + L Sbjct: 324 FLLLWLLGSVTLLTVVSLTFYFRSIRQSRSAVAASEQRLRLILGSVSNGIWGLDKDGNTT 383 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS---------TLCLLNYNQNF 281 + GY F YP A + ++ Sbjct: 384 FVNAAAADMLGYTPEELFDKPMHATIHHSYPDGTHYPAERCPMHATLVDGKPRMGIDEVL 443 Query: 282 LQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWH 323 + +E + + + + + + Sbjct: 444 WRKDGSELYVDYSSHPIRSHGEMEGAVVVFEDISERRQKDEALK 487 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 94/598 (15%), Positives = 203/598 (33%), Gaps = 35/598 (5%) Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 + D++ + + + I A+ Sbjct: 452 RMRAADGRTVWLQDIVRVIPDRFGKPQELFGVMLDITDRKAAEESLNLSKQ--------- 502 Query: 215 FTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV 269 + + ++L+ + GY + + + + V Sbjct: 503 --VFDNTSEAILIADRDRNILEVNQAYLDMTGYGREDCVGTYLALLDEPAGGGQLIGNLV 560 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQA 326 + Y ++ + + ++ + + R A Sbjct: 561 QQHGKWMGELLAQKRSGEYYPAWVSISTVHDNHGSLQNYVVVLTDISQRKQAEERLQFLA 620 Query: 327 LTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN L++ + + +D + ++ G ++ Sbjct: 621 THDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQE 680 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDM 435 + L +++ + + + G E ++++ + L ++ + ++ L + Sbjct: 681 VAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQQELYI 740 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + + LL ++ + + ++ L N++ Sbjct: 741 SASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKN-TFHFYSADGNANSVSRLTLENSL 799 Query: 496 RTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL++ + L Q + G + ++ + G+++P F+P+ + + Sbjct: 800 RRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIG 859 Query: 553 LQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL+ + + R VN+ + ++ I + ++P + LEI Sbjct: 860 EWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEI 919 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE NAE + ++ G + IDDFGTGY++ LK D +KID FV+DI Sbjct: 920 TESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIP 979 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ D I ++I +A + ++VVAE VETQ Q L G LQGY+ RP + D Sbjct: 980 QDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVED 1037 Score = 83.1 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 28/316 (8%), Positives = 76/316 (24%), Gaps = 17/316 (5%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN-LWNF 79 +V +S +S + +F + ++ L + + +L Sbjct: 61 VLVGAVISPLLSATSGALGLRLFGVVPDSDLHVTWLQWWMGDALGIILLTPAILACFHYE 120 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRW--QLGTRWRYGLTSRYVWQRLFWLGLVT--PIG 135 + + + ++ +L L + L + V+ + W L Sbjct: 121 PIRWTRAKLLEAVSLASMLLGLCFLAFNDLLSQAGELEAKAFLVFPLVIWAVLSFHQRGA 180 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 S+ +V + FF + + + L+ + L+ + V Sbjct: 181 AAASLLIVMTALWGGGGYHGFFSMEISNAALFNYWMF---ALVTVSIGVGLSGLHVGRLQ 237 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY-------LVPVFF 248 A R+ + + ++ I GY Sbjct: 238 ADERLRQQLGLYNALSNAQSDAGEGVMVIEDGKIIYANEAVRKIGGYDARDISMGSSFLS 297 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM 308 +I ++ + Y + + + A S ++ + Sbjct: 298 LIHPSDRERVAQHYKQRIR--GEYTPSRYEALAISKLGKPIPIEVAAANYRDGSERIVVL 355 Query: 309 VRIYHRSEWLNRRWHL 324 + + Sbjct: 356 IIDISSRKQAEEALLQ 371 Score = 66.5 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 34/333 (10%), Positives = 75/333 (22%), Gaps = 23/333 (6%) Query: 11 IKIFT-LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLC 69 + I+ L+F + + + + + + + + + LF + +V V Sbjct: 167 LVIWAVLSFHQRGA--AAASLLIVMTALWGGGGYHGFFSMEISNAALFNYWMFALVTVSI 224 Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 G+ + L L + + A + + + R Sbjct: 225 GVGLSGLHVGRLQADERLRQQLGLYNALSNAQSDAGEGVMVIEDGKIIYANEAVRKIGGY 284 Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL-------IYNML 182 I + S + D + +T +L + L + Sbjct: 285 DARDISMGSSFLSLIHPSDRERVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAAN 344 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYEND 237 + + IV ++ L L V E + Sbjct: 345 YRDGSERIVVLIIDISSRKQAEEALLQSRAEYRKLVESVKAVVWRATPEAAFTFVSQEAE 404 Query: 238 FIAGYLVPV-----FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + GY V F + L + L L Sbjct: 405 SLLGYPVREWTSNTSFWVDKLHPDDRPWVVDFCARETRQLKDHVLEYRMRAADGRTVWLQ 464 Query: 293 FILAVLISFSV---CLLYMVRIYHRSEWLNRRW 322 I+ V+ L ++ + Sbjct: 465 DIVRVIPDRFGKPQELFGVMLDITDRKAAEESL 497 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 125/633 (19%), Positives = 239/633 (37%), Gaps = 29/633 (4%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 R F + + + ++G L+ FF + ++ + L + Sbjct: 297 RNFGINGLVMFPLISMGEILGQISIVNLENKLFFYSETQLQLAQSIVDTTASALSNQLYM 356 Query: 184 YYLTRMIVSP----HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----Y 234 +I R +A + + A + L L Sbjct: 357 EKQEIIIEERTSEVRDKNKELERVVAELQQLSREKELILNSAGEGIFGLDLDRNITFCNP 416 Query: 235 ENDFIAGYLVP-VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + GY + N+T + N + F + + + + + Sbjct: 417 AGALMLGYETDRELIGQSVEIIMSGCEAEDNMTVSPFLNANFNSYEVFFRKDHSNFPVEY 476 Query: 294 ILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 + +++ V + + + + L + A D LT LPN L Q Sbjct: 477 VTSLIKEGDKVVGEVITFKDITQRKQLEEKIKYHAYFDSLTDLPNRVLLIDRLTQGLKYA 536 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G ++S+ + L + E+ + + G E + Sbjct: 537 KVNGEKLAVLYLDLDRFKLVNDSLGHSYGDLLLQSVAKRLSACVPEDATVSRQGGDEFTI 596 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 L + E + ++N + S+ + + + + F N +T + L+ Sbjct: 597 YLPNIKCENDILKVINCINASFSQPFNLIDNEIYIKTSIGISLFPKNGDTTETLIKNADT 656 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 +S + E + +T + + L N + AL++ +L+++ QP N + + Sbjct: 657 AMYKSKET-PGTSYHFFSEGMDTRTFESIKLENDLYKALERDELIIFYQPQINYKTNKIK 715 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 G + +L + G++TPD+F+PL + L VL+ K L S Sbjct: 716 GVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEWVLKEACKQLKEWHNQGYPLISMS 775 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q N+ I + +SP+ + LE+TE N E ++ + QL+ G Sbjct: 776 VNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLELTENLIVKNTEVTLKTMTQLNGLGVN 835 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ LK L +KID FV++++T+ A I +I LA+ L V+A Sbjct: 836 LAIDDFGTGYSSLGYLKNLPISTLKIDKSFVQEMLTD-DAAAITNTIITLAQNLKLEVIA 894 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L + +QGY +P + Sbjct: 895 EGVETKEQADYLLEQNCHLMQGYFFSKPMKAGE 927 >UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Shewanella RepID=A0KRF8_SHESA Length = 1077 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 112/636 (17%), Positives = 229/636 (36%), Gaps = 31/636 (4%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 + + LF I + ++ SF KI+ A + ++ + Sbjct: 426 SLSLLGLYLFSAIFTAAITLWLGRKIIRSFMVKITKIANDMQQMAADPQL-NINIDASGT 484 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 + + RMI A R A + + Sbjct: 485 DELARMAQAMNRMISERQKANHALSRAAAVFNYSAEGIMVTDADN------HIELINPAF 538 Query: 237 DFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 I GY + + + + A+ + Y Sbjct: 539 SQITGYSLEEVKGRSPSILSSNRHPHHYYTAMWEALHKEGKWEGEIWNKRKDGQVYPEYL 598 Query: 294 ILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--- 347 + V+ + ++ + + + + QA D LT LPN + + + E Sbjct: 599 AITVVRNEQGEIIQHIGLFMDISKRKQYEQDLWYQANFDTLTGLPNRKLFNERLQHEIQL 658 Query: 348 -----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + +D ++++ G ++ + + L + +N+ + ++ G E + Sbjct: 659 AQHDSRKLAILLIDLDQFKYINDVQGHATGDLLLQDVAKRLENIAGKNDFVARIGGDEFV 718 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L+L E ++HM + + + + N + + G + + + L Sbjct: 719 LILPRVTNEFAIEHMASRIIETLATPFNLNEREIQISASFGIGVYPEDGLDVSSLTRNTE 778 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 Q+ ++ ++ L +R A+ Q + L+ QPI + + Sbjct: 779 MAMYQAKDAGRN-NFKYFTSGMNQAMFARMELEQRLRRAVAQDEFTLFYQPIVDMKTGQI 837 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 + ++ D G++ PD+F+ + + L VL + L + Sbjct: 838 CSVEALIRWQDPDLGLIPPDQFIAIAEETGLIEPMGEWVLNQAMHDLRQWQHMGLNLNVA 897 Query: 577 VNLMPLTLLQK---NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +N+ + + F R+HI+P+ V +EITE +A + +E + Sbjct: 898 INVSSRQCINTRGIGFDQVLQECFNRHHINPRNVHIEITESMLMGDASHCLSTLESIRHL 957 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +I IDDFGTGY++ LK+ +IKID FV+ + N +A +V++I + ++ + Sbjct: 958 GSQIYIDDFGTGYSSLSYLKKFPISVIKIDRSFVEHALENCSNANLVKAIVMMGQSLEME 1017 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +VAE +ET+ Q L LG Y QGYL+ +P P + Sbjct: 1018 LVAEGIETEAQWQFLRDLGCHYAQGYLLSKPLPFDE 1053 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 98/588 (16%), Positives = 217/588 (36%), Gaps = 24/588 (4%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 +F + + ++ + + + Q + + +R L+ Sbjct: 318 VMAPLFRIATIEAVTAIMFLAAASIMMMLWWRRQQALYQASYYQQQLQHQMLSQRFDNLT 377 Query: 219 WLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL-TWAVSTL 272 A VLL+ ++ GY + L +L + Sbjct: 378 RFANDLVLLVDAQGQIIDANERALDTYGYPEDELKTFKLKDLCDLSQQECDLFWEQLKVE 437 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPL 331 + + + + + + + L+ ++R + + QA DPL Sbjct: 438 QGVRFETMQFRQDGSTFPVEINARWIDLDRGHLVQAIIRDISERKAAEDQLVHQAYHDPL 497 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN + + L +D + ++ G + + ++ + + Sbjct: 498 TGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLGHAVGDRILTTLAQRM 557 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 +++ + + + G E L++L + + L S+ + + + + Sbjct: 558 QETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQPVLIDGEEMCLTTSVG 617 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + L+ ++ ++ +++ L N +R AL Sbjct: 618 ISVAPEDSIEVDQLIRFADTAMYRAKEKGRN-NFQFYTPDMNAHAGRRLQLENNLRKALQ 676 Query: 501 QGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + ++++Y QP + G + +L + + G+++P+ F+PL + + LE Sbjct: 677 RQEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIGAWALE 736 Query: 558 SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + + + +VNL +N+ I ++ + ++ + + +E+TE Sbjct: 737 QACQQTVAWQKNHPELKIAVNLSARQFRNENLVDDIEQILNKTGLAARHLEMELTESLLM 796 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 + + ++ + +L K G +AIDDFGTGY++ L R D +KID FV + + Sbjct: 797 EDVDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMSLDNNG- 855 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I R+I L + LS++AE VE +Q+ LL +LG QGY RP Sbjct: 856 -IARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFSRPV 902 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 103/570 (18%), Positives = 199/570 (34%), Gaps = 28/570 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 M + I A+ R + + +++ I Sbjct: 313 MTALVVVHDISGRRTAERQARLFERVFRNALEG---ICITDPEGIIVA---VNPAFTTIT 366 Query: 241 GYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 GY + ++ A+ + Y ++ Sbjct: 367 GYPADDAVGQSPRLLKSHHHDSAFYEDMWRALVEEGRWEDEIWNRRRNGEVYPEWLSISA 426 Query: 298 LIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 + + + + + + QA D LT LPN L + Sbjct: 427 IPGPTGRTEYYVAVFHDITELKAKESQIQHQAHHDALTGLPNRALLRDRLGMAINGARRE 486 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + + +DN + ++ G M+ ++ + +++ + L ++ G E ++VL Sbjct: 487 DRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVRPQDTLARVGGDEFVVVLQ 546 Query: 407 GPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 E E + L +R + L +G F + + L+ Sbjct: 547 DVEGERDAAQVAERLLARFTDPVRVQEHELFVGASVGIALFPDDGDDPDTLVRNADIAMS 606 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 ++ ++ + +++ L + AL GD+ + QP + G + Sbjct: 607 RAKEQGK-RRYHLFTPAMNDRAVRRLSLEGDLHRALAAGDITAHYQPRVDLNTGLITGME 665 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNL 579 + ++ DG P +F+PL L +L +VNL Sbjct: 666 ALARWIRADGSQEHPAEFIPLAESTGLIVPLGEHMLRLACAKTRALCDAGHADLHVAVNL 725 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 +N+ G + + + P + LEITE ++ + ++ + QL + G +++ Sbjct: 726 SVHQFRHRNLVGMVADVLAETGLPPHLLELEITESTIVTDVDHTIRKLNQLAEMGIALSV 785 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ +LK L +KID F++DI + DA I +I +A L VVAE V Sbjct: 786 DDFGTGYSSLYQLKNLPLTSLKIDRSFIRDIPDDPNDAAIAATIITMADRLGLRVVAEGV 845 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET +Q L G +QG+L RP P + Sbjct: 846 ETPEQLNFLLLEGCHEVQGFLFSRPLPPDE 875 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 100/596 (16%), Positives = 207/596 (34%), Gaps = 26/596 (4%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 + + + I + E Sbjct: 215 VMSMPSGASYWLSTKFPLVGENSDSQHVGGIAIDITERMKVEQDLLLRTRAI---EACVN 271 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTL 272 + + + + L+ + I GY F G+ + L A+ Sbjct: 272 PIVIVDTATPGMPLIYVNGAFETITGYSSEEAIGRNCKFLQGMDTDQPELGKLRAAIREQ 331 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + + +A + + ++ + + QA Sbjct: 332 RPASVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHFVGVLYDVTQIKRYQEDLEHQANY 391 Query: 329 DPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT L N L + + S + +DN + ++ G I ++ Sbjct: 392 DTLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVG 451 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGY 437 L +++ + + ++ G E +L+L+ ++ + + + + + Sbjct: 452 SRLQTCVRDGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTC 511 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 RF + E + LL ++ + + ++ + +++ L + + Sbjct: 512 SMGVARFPEDGEDSESLLANADTAMYRAKSSGRN-NFQFYTKEMNATSGERLSLESDLWH 570 Query: 498 ALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL +L L QP + G + ++ G++ P F+P+ L + Sbjct: 571 ALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIW 630 Query: 555 VLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VLE+ + + R ++NL L +N + + + + P + LE+TE Sbjct: 631 VLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTE 690 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N E + + L+K G ++++DDFGTG+++ LKR D +KID F+ + ++ Sbjct: 691 SMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSD 750 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA+I ++I LA + V+AE VE + + L K G QGY I RP D Sbjct: 751 PGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDD 806 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 117/764 (15%), Positives = 247/764 (32%), Gaps = 61/764 (7%) Query: 15 TLAFTLTVVLIQLSRFISPL-AIIHSSYIFLAWMPLCVMLSILFIFGWRGVV-------- 65 L F L + +S A + L ++ + + R Sbjct: 175 ALGFVLAWFALISGHVVSGRRAPLLLGNFSLLMASAAIIFLLADTWDSRWWFYHFLRLAA 234 Query: 66 -PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 +L F + + + + L R Y + Sbjct: 235 LALLLSYFFALYLKDFRVLRENDARFQALVESIHAGVYRTQVTLERRLVYASAQMHQVAG 294 Query: 125 LFW-----LGLVTPIGIK---CSMYLVGSFFDFPLKISTFFGDADAIF-----TVVDLLS 171 L G+ + + + V D Sbjct: 295 LSMQQCQEGGVSLKSLVVPEDWPHVQEALEWSIKTHVPYEMQYRINHPQRGEMWVSDRGR 354 Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--- 228 + F I + + A+ ++++ Sbjct: 355 IIKDHQGQPCWFDGALLNIHEARETEQQLLLAKQ-----------VVQTASEAIVITNHK 403 Query: 229 --LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 ++ + I G++ T + + + + + Sbjct: 404 NQIMDVNPAYERITGFMRHEVLGRNPKITQSGRHDASFYATMWKHLVGEGHWSGEIWDRR 463 Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + ++ + + + + R + ++ DPLT LPN Sbjct: 464 RNGEIFPKWLAISAIRNRQGVISHFVGVFNDISRQKSTEQQLERLVFYDPLTQLPNRVLF 523 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 S + +D + ++ G + + + + L+ +++++ Sbjct: 524 RDRLIHEVGVAERSNKLMSLLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDT 583 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++L G E H+ + ++ L +G + + Sbjct: 584 VARLGGDEFAIILPGMERAEDAAHVAETIINQLQVPFSIEENELFVGASIGIAVHGQDGD 643 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 L ++ ++ Q K++++ +R A+D +L+L+ Q Sbjct: 644 DYDSLTMNADAAMFKAKESGKG-TYKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLHYQ 702 Query: 510 PIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + G + ++ + G++ P +F+PL + L VL + Sbjct: 703 PKVDAESRQIVGMEALVRWVHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQW 762 Query: 567 PCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + +VNL P + N+ ++ + ++ + LEITE A + ++++ Sbjct: 763 WDMGLPQVQVAVNLSPRQFQEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIE 822 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +++L G RI+IDDFGTGY++ LK+ +KID FV+D+ + A I+ SI Sbjct: 823 TVKKLKDLGVRISIDDFGTGYSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIIS 882 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AKA +L VVAE VET QQ L Q +QG+ + +P P +D Sbjct: 883 MAKAMALGVVAEGVETAQQMEFLRGQECQQVQGFFLSKPLPPSD 926 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 107/562 (19%), Positives = 209/562 (37%), Gaps = 29/562 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFI 249 + + E+R + + + I GY P I Sbjct: 145 QDITQRKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELI 204 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLN-----YNQNFLQGVETEYSLAFILAVLISFSVC 304 + + Y A TL L + + + ++ + + + Sbjct: 205 QSLNNIAQQLYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGK 264 Query: 305 LL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 LL V + N QA D LT LPN ++ + + Sbjct: 265 LLYFEGTVEDITERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQAISYADRTASKLAVV 324 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + + ++ R L +++++ + + G E +L+LS Sbjct: 325 FVDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVLLLSNIHGMDA 384 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 L + + S + + + +T + LL ++ Sbjct: 385 LSQTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAMYKAKQEGK 444 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLK 527 ++ +++ + +R AL + L+ QP N G + ++ Sbjct: 445 N-NFQFYTRELNSILVERLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEALIRWHN 503 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTLLQ 586 G+++P++F+P+ + +L + VLE +A SVN+ P Q Sbjct: 504 PRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVSPRQFQQ 563 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N+ G I R+ + + P + LEITE + + + L G ++AIDDFGTGY Sbjct: 564 SNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAIDDFGTGY 623 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK D +KID FV + ++T + I+++I L +++VAE VET++Q+ Sbjct: 624 SSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVETERQRD 683 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L +G +QG+L +P P Sbjct: 684 FLLSIGCDEMQGFLFSQPLPFD 705 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 10/140 (7%), Positives = 26/140 (18%), Gaps = 12/140 (8%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 + L + + A +L + + GY Sbjct: 22 IRNWLQHREHILDSLLKNMEGMAYCCLVDAHWTMLFISDG---CFDLTGYRPDELLHNGC 78 Query: 253 LGVGKLRYPFLNLT------WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 +L P A+S + + + Sbjct: 79 TSFEELTLPEDRARIRNTVDDALSRRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVE 138 Query: 304 CLLYMVRIYHRSEWLNRRWH 323 L ++ + + + Sbjct: 139 ALEGFIQDITQRKLNEQALQ 158 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 108/552 (19%), Positives = 196/552 (35%), Gaps = 26/552 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFT---LG 254 S + + A ++LL + + G L Sbjct: 279 AQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFAS 338 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRI 311 + V L + YS + + + + + Sbjct: 339 GLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITD 398 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + + QA D LT LPN + EQ L +D + + Sbjct: 399 ITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQI 458 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + YG ++ R L ++ ++ + +L G E +++LS E + ++ + Sbjct: 459 NDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILY 518 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 S T + F + ET LL + Sbjct: 519 SLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAK-QGGERRYAIFTPD 577 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKF 538 ++ ++ + + + +R AL + + L+ QP + G + ++ + G++ P F Sbjct: 578 MARRSLALLTMESDLRHALARDEFELHFQPKVRADLTLIGAEALIRWRHPEKGLINPGDF 637 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLF 597 +PL + L L + + + SVN+ P + + + ++ Sbjct: 638 IPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQIL 697 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + P+A+ LEITE + E ++ + L G ++IDDFGTGY++ LK Sbjct: 698 VETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPI 757 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV+D++ + DA IV +I LA+ SVVAE VE +Q L Q Q Sbjct: 758 DTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQ 817 Query: 718 GYLIGRPQPLAD 729 G+L RP P A+ Sbjct: 818 GFLYSRPLPPAE 829 Score = 70.8 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 26/264 (9%), Positives = 50/264 (18%), Gaps = 18/264 (6%) Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV-WQRLFWLGLVTPIGI 136 ++ +A + S + A+LR + L + +T Sbjct: 29 APSIAEGLSAALFQSVVEALPVGTALLRDGVIVHANATLAGQIGETIDTLIGSPLTSYLT 88 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 V + + + S L ++ L ++V Sbjct: 89 PADALAVQKVVEGAIALHGGVPVRRIAHIRHISGSERVYSLRFSPLDNGPHPLLVVITRD 148 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIF 251 E + + A + L I GY P I Sbjct: 149 MTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIAH 208 Query: 252 -------TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---F 301 G R F L + + + + Sbjct: 209 FTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVW--RCDGHTIWITENARCVRGPDNE 266 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQ 325 + V L Sbjct: 267 VLYYEGTVEDITAQRQSQETMRLL 290 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 111/563 (19%), Positives = 205/563 (36%), Gaps = 25/563 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 ++R + Q + + L A L D Sbjct: 490 ISRDVTEIKKTQQQFHQAKWSIDASLTPM-----LMADLQGRLTYANQAALDLWGYAGEE 544 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC- 304 + + + + + Q + + V+ + Sbjct: 545 EVLGKNIVEFQEDPQRTRIIMEILKARGVWRGEGRGKQKNGNGFDVELQAQVVKDQNGGP 604 Query: 305 --LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----QEAG----KSFCC 354 +L + A D LT LPN L+ E Q + Sbjct: 605 LSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARRLNKFVAVLL 664 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +DN + ++ G IRS+ L + + L + G E +L+L+ + Sbjct: 665 LDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLLTDLDDIQNT 724 Query: 415 QHMVNI----LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 L R + ++ + + + + LL + ++ + Sbjct: 725 TSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTAMYEAKKNGR 784 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 ++ Q ++ + +R+AL +G++ L QP + G + +L Sbjct: 785 N-GYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQS 843 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQ 586 + G ++P +F+PL + L VL+ + A + +VNL Q Sbjct: 844 PEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQ 903 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++A I ++ + +SP + LEITE N E+++ + +L K G + +IDDFGTGY Sbjct: 904 PDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGY 963 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+L D IKI FV+DI T+ D I+++ +AK+ + ++AE VE QQ A Sbjct: 964 SSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLA 1023 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L G +QGY +P P + Sbjct: 1024 FLLLHGCHAMQGYYFAKPMPAQE 1046 Score = 42.3 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 16/170 (9%), Positives = 40/170 (23%), Gaps = 11/170 (6%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 +L + V I ++ + + + +++ + E + A + Sbjct: 339 SELSAHKRQVTIALLIAGVFLCLSCTLTLMIMRYKKTLQALRQSEGTLKAMLESIADPIH 398 Query: 227 LLLLCTPY------ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 ++ LV P + A S + Sbjct: 399 MVDRDLNILWANDIAKQLFGKNLVGQKCYAALHRSPTPCDPMCHAIKAFSDGHAHSSENL 458 Query: 281 FLQGVETEYSLAFIL----AVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 F + E +L + R + +++ QA Sbjct: 459 FFDINDEERCFLVTANVASTDSQGQPSAVLTISRDVTEIKKTQQQF-HQA 507 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 121/607 (19%), Positives = 221/607 (36%), Gaps = 26/607 (4%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 ++ F AD + + + + I A+ Sbjct: 204 LAQGEAIQHVRQFPLADDVKLWLLTTFPVQDMDGNFNHIGGIGIDITEQRKAEEALLLRN 263 Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII---FTLGVGKLRYP 261 + L+ + + GY F G + + Sbjct: 264 HAIEASATPILIVDVTQPAMPLI---YVNRAFELVTGYSSQEAVGRNCRFLQGHDREQPE 320 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRIYHRSEW 317 + A+ C + + + +A + + + + Sbjct: 321 LEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPDPHGGEPRYFVGVQKDITEIRQ 380 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGL 369 QA D LT L N L++ +Q S + IDN + ++ G Sbjct: 381 YQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFKRVNDSMGH 440 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QI 426 IR + + L +++ + + +L G E +L+L+ + + +V + + Sbjct: 441 SAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVVQRIRNTIINPF 500 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 L + F + LL Q+ A + ++ + Sbjct: 501 IITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSN-NFRFYAKEMNAELG 559 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++ L N + AL+ L+L+ QP N + G + ++ G++ P +F+PL Sbjct: 560 HRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSE 619 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L + V+E+ R +VNL L QK++ I + + + Sbjct: 620 DDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGL 679 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 PQ + LEITE N E S+ + ++ G ++++DDFGTGY++ LKRL + +KI Sbjct: 680 DPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKI 739 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F+ DI T DA+I RSI LA + + V+AE VE+ Q A L + G +QGYL+ Sbjct: 740 DKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLS 799 Query: 723 RPQPLAD 729 RP+P + Sbjct: 800 RPRPFEE 806 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 707 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 111/617 (17%), Positives = 216/617 (35%), Gaps = 25/617 (4%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + + + + F AD L + ++ I Sbjct: 196 VLLEWRAAALGEATFQTEARFLRADGSIVWARLNAAAMLDGLHLRGHVQTVEDISERKIT 255 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAAL------SVLLLLLCTPYENDFIAGYLVPVFFII 250 + + + L L+ + T + + G + F I Sbjct: 256 EDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPREAAIGQPLSEVFRI 315 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LY 307 ++ L + L + + E ++ A + + + + Sbjct: 316 LNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAAPIHNRDGQVAGAVI 375 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + S + + A D LT LPN L + L +D Sbjct: 376 VFHDVSESRAMALKMAHLAQHDFLTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDY 435 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ + L+ +++ + + + G E +++L+ E + Sbjct: 436 FKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAE 495 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + L + + + ++ + A+ Sbjct: 496 KLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTVMKNADTAMYHAKANGRN-NYQF 554 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIM 533 ++ + +++ + +R AL QG+ +LY QP + G + ++ + G++ Sbjct: 555 FTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLV 614 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGR 592 P +F+P+ + L VL + + SVN+ + K+ Sbjct: 615 YPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEG 674 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + K + P + LE+TE +AESS +E L G ++AIDDFGTGY++ L Sbjct: 675 VALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYL 734 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KR + +KID FV DI + DA IV ++ + K VVAE VET++Q A L L Sbjct: 735 KRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLH 794 Query: 713 VQYLQGYLIGRPQPLAD 729 QG+L GRP P + Sbjct: 795 CDEGQGFLFGRPLPADE 811 Score = 66.5 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 23/212 (10%), Positives = 45/212 (21%), Gaps = 19/212 (8%) Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS--LFTAVLIYN 180 L L L GI + + + I + D + V + L+ Sbjct: 55 IVLLDLSLPDGQGIAVFEQVSRLAANALILILSSADDEEVARLAVQNGADDYLVKGLVDA 114 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYE 235 R ++ E R +S + L + + + T Sbjct: 115 HWLPRTLRYLIERKT-------TRQALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAA 167 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 I+G + L A FL+ + Sbjct: 168 YHKISGLNLEQTLGTNWSMAIHPDDRQRVLLEWRAAALGEATFQTEARFLRADGSIVWAR 227 Query: 293 FILAVLIS--FSVCLLYMVRIYHRSEWLNRRW 322 A ++ + V + Sbjct: 228 LNAAAMLDGLHLRGHVQTVEDISERKITEDAL 259 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 707 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 116/653 (17%), Positives = 217/653 (33%), Gaps = 23/653 (3%) Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 C + + + G R L + LFW + + + Sbjct: 205 CTAMVSQMRTGGSMRRTLRCQRPDGSLFWNDVTLSPIFNERGEISQCIAVLADATALKES 264 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYY-LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 + + L A L R I + R ++ A Sbjct: 265 EQALRRSRDALERQVEARTENLTEVVRQLRREIEERTRVESALRLSEQRLANAQRIARLG 324 Query: 218 --SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT-WAVSTLCL 274 W A L + P + + G R + Sbjct: 325 HWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYERFLEMIPGDDRQRLQEAIARCLEHGLP 384 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPL 331 + +E L ++ L + R A DP+ Sbjct: 385 YEIDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDITERHDYQNRLRHLANFDPV 444 Query: 332 TLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN + + + L +D + ++ G MM +R L Sbjct: 445 TGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAERL 504 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 L ++E + + + G E +++L E + + R Sbjct: 505 LGCVREGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIG 564 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + E + L+ + A ++ + +++LL N + AL+ Sbjct: 565 ISLYPEDDEHPEDLVRHADSAMYLAKAQG-GAGYRFYTPDMNTRAMERLLLQNQLHQALE 623 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 G ++ QP + G + ++ + G++ P +F+P+ L VL Sbjct: 624 LGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLR 683 Query: 558 SLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + + SVNL P ++ G + R+ + + + LEITE Sbjct: 684 TAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLI 743 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + E ++ + ++ + G R++IDDFGTG+++ LKRL +KID FV I ++ D Sbjct: 744 IVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDD 803 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A I ++ L + L V+AE VET++Q + L + G +QG+ I RP P + Sbjct: 804 AAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGE 856 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 9/126 (7%), Positives = 30/126 (23%), Gaps = 13/126 (10%) Query: 211 EKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF------IIFTLGVGKLR 259 E + V+L+ + I GY ++ + + Sbjct: 19 EGVLRAVLEEMVDGVVLINRLGIIREVNPAVTRIFGYERKEMLGANVSLLVPSPDRERHD 78 Query: 260 YPFLNLTWAVSTLCLLNY-NQNFLQGVETEYSLAFILAVLISFSVC-LLYMVRIYHRSEW 317 N + + + + + + ++ + + +VR Sbjct: 79 QYLRNYLQTGEGRIIGVGRTVHGQRKDGSLFPMELAVSEVKAGGEHLFAGIVRDISERHQ 138 Query: 318 LNRRWH 323 ++ Sbjct: 139 FHQTLA 144 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 111/591 (18%), Positives = 210/591 (35%), Gaps = 31/591 (5%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 + + D L + + I A L R + A E + Sbjct: 361 GVRWIRDELRAVRDEGGRVVRVAGVWIDITEQRQATELLRLNSAVI---ESTHDGVVLTD 417 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 ++ + GY F R +L++ A+ Sbjct: 418 LDGAIVA---VNRAFTEVTGYSRDEVVGQNPRFLQSGRHDRGFYLSMWAALKEAGHWQGE 474 Query: 279 QNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + L + + + + + + R A DPLT LP Sbjct: 475 LWNRRKNGELFPEWLTLNAVRNEVGHVTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDLP 534 Query: 336 NFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + E + L +D + ++ G +R++ L + Sbjct: 535 NRLLVLSRLEHALDGAQRRGCRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGAL 594 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGR 443 +E + L +L G E +++L E + L + N + + Sbjct: 595 REEDTLGRLGGDEFMVLLEHVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISF 654 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + + L+ ++ A E + T+++ L +R AL+ + Sbjct: 655 YPDDGDDFMTLVRNADAAMYRAKAQGRN-TYGFYTEDLIRSATERLALETRLRRALEHDE 713 Query: 504 LLLYAQPIR---NKEGEGYDEILARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESL 559 ++Y QP+ + G + ++ G +++P F+P+ + L VL Sbjct: 714 FVVYYQPVLGVKDGRLLGAEALVRWK-PQGEPMVSPAAFIPVAEETGLIVALGEWVLRDA 772 Query: 560 LKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + + +VNL +++++ + + + + LEITE Sbjct: 773 CRQVREWIDAGYAFGQVAVNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLE 832 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 E ++ +E+L + G +AIDDFGTGY++ LKR D +KID FV+DI ++ D Sbjct: 833 AGEHAVGLLERLKQQGVGLAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLA 892 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +I +A+A ++V AE VE + Q LL LG QGYL P P + Sbjct: 893 IASAIVAMARALDMAVQAEGVEGEAQLELLRGLGCGSYQGYLCSPPLPADE 943 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 92/545 (16%), Positives = 199/545 (36%), Gaps = 24/545 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIF---TLGV 255 + +A + + +L+ + I GY Sbjct: 248 ENAAKQGLFQAAAVFKNSGEGILISDEKGLIRDVNAAFSQITGYSRDEAIGQATSLLRSG 307 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 + + A+ + + ++ + + + + + Sbjct: 308 RHDAEFYKKMWHALKETGTWRGEIWNRRKSGAVFPELLTISKIDGQNSGFVAIFTDITQL 367 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHY 367 + + A DPLT LPN + + +Q + L ID+ + ++ Sbjct: 368 KETEEQLQKLAHYDPLTELPNRYLINERLQQSIRRAQRRSERLAVFFLDIDSFKNINDSL 427 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G + + L L+++++ + ++ G E L++L + ++ + + Sbjct: 428 GHLAGDKLLAMTANRLRELLRDDDTVGRIGGDEFLMLLEDINSPDVATNIAEKIIGALRK 487 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + +T + L+ + E ++ Sbjct: 488 PTILEGRSVSVSASVGISIYPDDGQTAETLMSNADAAMYSAKEQGRN-TFRFYSENLTRA 546 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 + VL+ + +R A + + L QP + G + +L G ++P +F+P Sbjct: 547 AFQNVLIDSALREAKSRNEFRLAFQPQIDIVTNSLLGLEVLLRWHHPTLGTVSPAQFIPQ 606 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L VLE + R +VN+ ++ ++ ++ + Sbjct: 607 AERTGLIRDIGQWVLEQACLQGNKWLAEGLPFGRLAVNVSAPQFRAEDFVDQVRQVLEYA 666 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P + LE+TE + E + N+++L G + AIDDFGTGY++ LK++ D + Sbjct: 667 NFPPNRLELELTESVLVQDTEQLIGNMDELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRL 726 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 K+D FV +I T+ D +I ++ L +A L V+AE +E ++Q L +G QG+L Sbjct: 727 KLDKSFVDNISTDDNDRIIAEAVVALGQAMGLEVIAEGIEYEEQARALRDIGCTQFQGFL 786 Query: 721 IGRPQ 725 G P Sbjct: 787 YGMPM 791 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 109/572 (19%), Positives = 208/572 (36%), Gaps = 29/572 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFI 239 L I++ +R E++ ++ A + + I Sbjct: 497 LLQTQIIAVIRNITKRKRAENELRQAEEKYRSIFENATEGIFQSSPSGSYISANPALARI 556 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWA-----VSTLCLLNYNQNFLQGVETEYSLAFI 294 GY P +G+ Y + + + ++ + + ++ Sbjct: 557 YGYDSPQELQHHLTDIGRQLYVNPDRRQQFVHSILEQGQVTDFESQVYRKDGSVIWISEN 616 Query: 295 LAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 + +L V + H QA D LT LPN + Q Sbjct: 617 ARAVRDRQGNILYFEGTVEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADA 676 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G + ++ + + LLP ++E + + + G E L Sbjct: 677 RRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTL 736 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L +T + L + L + + + E LL Sbjct: 737 LLPHVQTPADSVKIAERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNADA 796 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 ++ M++ + + + L + + AL+Q +L +Y QP N E Sbjct: 797 ALYRAKEEGRNGLYC-YTPMLNSRGHELLALESELHKALEQQELDVYYQPQINAATGEIL 855 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 + ++ G+++P F+ L + L VLE+ + Sbjct: 856 RLEALVRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGFPGLGTA 915 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q ++ ++ + ++ + LEITE A N + + +L + G Sbjct: 916 VNLSVRQFQQPHLVQQVAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHELDQMGVG 975 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IA+DDFG+GY++ L++ IKID F++++ + D IV+++ L + +LSVVA Sbjct: 976 IALDDFGSGYSSLNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLNLSVVA 1035 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VE+Q Q +L LG +QGY G P A Sbjct: 1036 EGVESQSQLKVLRSLGCDIIQGYFFGPPIAAA 1067 Score = 69.6 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 10/143 (6%), Positives = 30/143 (20%), Gaps = 13/143 (9%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFI 249 +R + E++ ++ A + + + GY P + Sbjct: 259 RDITDHKRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSPEELL 318 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLN-----YNQNFLQGVETEYSLAFILAVLISFSV- 303 +G+ Y L + + + + + + Sbjct: 319 AHLTDIGRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDGTGK 378 Query: 304 --CLLYMVRIYHRSEWLNRRWHL 324 V + + Sbjct: 379 LLYYEGTVENITDRKRTELQLLQ 401 Score = 58.8 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 37/148 (25%), Gaps = 15/148 (10%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLV 244 I +R A + E R +L ++ + +L L + GY Sbjct: 128 IEGFITDITPLKRAEAALIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLLGYHP 187 Query: 245 ------PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 F ++ +++ F T L F + L L Sbjct: 188 QNCEGKSAFGLVHPQDRKQVQQTFQQAIT--HTEFTLTVEYRFRHQDGSWRFLESTGRNL 245 Query: 299 ISF--SVCLLYMVRIYHRSEWLNRRWHL 324 ++ ++ R + Sbjct: 246 LADPAVAGIVVNTRDITDHKRTESALRQ 273 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 6/137 (4%), Positives = 24/137 (17%), Gaps = 10/137 (7%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF------ 248 + + + + + + + + GY Sbjct: 10 EDKEFLAYTSRFLRLIDSLPGIVFSGSNDAQWSMQYLSRG-CLALTGYSSDELAQKGGEA 68 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 L L+ A+++ E + ++ + Sbjct: 69 FNAITHPEDLPRVLATLSAAIASSEPYEVEYRIRTKSGEEKWVLEKGHRVLDEDQCTCGI 128 Query: 306 LYMVRIYHRSEWLNRRW 322 + + Sbjct: 129 EGFITDITPLKRAEAAL 145 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 9/164 (5%), Positives = 37/164 (22%), Gaps = 4/164 (2%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 +I + + + + I ++ + + + L + Sbjct: 361 SIIWITEHARAVRDGTGKLLYYEGTVENITDRKRTELQLLQTTSELKAIFQALPDLYFRV 420 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL-CLLNYNQN 280 +L D + + + + F + + ++ Sbjct: 421 DHDSTILDFKAGRRTDLYLEPEEFLGRRMTDVLPPPVATQFSGAIDRILSGEARVDLEYV 480 Query: 281 FLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + F +L ++ ++R + + Sbjct: 481 LPMPDGEQ---TFEARLLPLLQTQIIAVIRNITKRKRAENELRQ 521 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 105/593 (17%), Positives = 212/593 (35%), Gaps = 29/593 (4%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 +A + L + +TR I + + + Sbjct: 330 EAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKEVEEQLTLATNVFKNSVEG---VV 386 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + I GY+ + F L A+ Sbjct: 387 VTDRHGN---ITDVNGAFFEITGYVREELLGQNPRIFSSGRHDKAFFDKLWNALLANGKW 443 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 N + T + ++ + + + + + A DPLT Sbjct: 444 NGEIWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFADISAQKENEAQLTHLAYFDPLT 503 Query: 333 LLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN +Q + + +D + ++ +G + + + + L Sbjct: 504 HLPNRMKFMMQLKQEVRQAKRLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLR 563 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN-NTGLDMGYGAA 440 + + + L ++ G E + ++SG + +N L + + L + Sbjct: 564 SQVGDQDVLSRIGGDEFVALISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMG 623 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + LL ++ E ++ Q+ + + L + + A++ Sbjct: 624 VSLYPNDGTDADTLLRNADAAMYRAKNDGRN-NYAFYTESLTQQSFEHLKLQSALYGAIE 682 Query: 501 QGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 Q L L QP + + G++ +L G+++P F+P+ + L L VLE Sbjct: 683 QNALYLMYQPKLDLVSRKTVGFEALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLE 742 Query: 558 SLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + + K R +VN+ L + + + R+ + + + LE+TE Sbjct: 743 TACRQGMRWLREGKHFGRIAVNVAGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVM 802 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N + ++ ++++L G +++DDFGTGY++ LK+L +KID FV+DI +T + Sbjct: 803 MQNPDLAIRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNN 862 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +++ L A L ++AE VET++Q L + QGYL RPQ D Sbjct: 863 TAIAKAVIALGHALKLDIIAEGVETKEQADFLQQNQCDQAQGYLFSRPQLPED 915 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 120/665 (18%), Positives = 229/665 (34%), Gaps = 32/665 (4%) Query: 95 FVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIS 154 L + +R GL S L L L ++ FPL I Sbjct: 29 GAALPDARVSICATLAEYRAGLASDPPDIVLIDLNLPDGSALEALT-CPAEEGAFPLLIM 87 Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW--RRDIAPSLGKEK 212 T G+ + + +L V + + +L R+ E Sbjct: 88 TAHGNEEMAVAAMKAGALDYIVKSAQAFACMPQTVERALREWNLLRKHRQAELSLCESES 147 Query: 213 RAFTLSWLAA------LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG-----VGKLRYP 261 R + V + ++ GY L + Sbjct: 148 RFRRILQEIPSIAFKGYGVDGTVRYWNLASELFYGYSAGEAIGRNLLDLVIPEGMRAEEK 207 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLN 319 L A + Q L+ + ++ AV+ + L + + Sbjct: 208 RRMLRMAETGRADPPSEQCLLRRDGSRITVLSCHAVVRRPGEAPELYGLDIDISERKINE 267 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMM 371 + A D LT L N EQ + L +D + ++ G Sbjct: 268 EQLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGHSF 327 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 + ++ + L ++++ + + +L G E +L+L+ + + + + Sbjct: 328 GDRLLSAVAQRLDRVVRDTDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRI 387 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + M + + L+ ++ ++ + + Sbjct: 388 EGREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQEGGG-VFSFYAPEMNQRAMET 446 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + + + +R AL++G+ LY QP + G + ++ L G++ P F+PL + Sbjct: 447 MEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEET 506 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL+ + + + +VNL ++ G + + + P Sbjct: 507 GLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDP 566 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE ++ + +E+L G R+++DDFGTGY+++ L + +KID Sbjct: 567 HLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDR 626 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F+K IVT+ A I SI +A L +AE VET+ Q A L K G +QGYL+ RP Sbjct: 627 SFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRP 686 Query: 725 QPLAD 729 P ++ Sbjct: 687 LPASE 691 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 106/595 (17%), Positives = 210/595 (35%), Gaps = 29/595 (4%) Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 + + +L F + I + ++ + + + Sbjct: 284 RYRQRRGQLVWANLTAALMRDEGGRPEYFILVVEDISARKQSEEAQQLALTVFDSMLEGV 343 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG---KLRYPFLNLTWAVST 271 +L I Y V + + + + Sbjct: 344 IITDHH------RRILAVNAAFGEITRYPVEALLGRTPPLWRTAHQDAAFYRRIWRQLLA 397 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALT 328 + T + L ++ + +++ + + + A Sbjct: 398 SGRWEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQYVFVFNDISQLKDSQEQLERLAHY 457 Query: 329 DPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN E + + +D + ++ G + +I Sbjct: 458 DPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIA 517 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW-NNTGLDMG 436 + L +++ + L +L G E L+V+ ++ + + L + + +G Sbjct: 518 QRLHQRLRQEDTLARLGGDEFLVVIEEAP-VQQVASIAHALLKVVDQPFGFSGGGEAYVG 576 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + G+ + L+ + A A E ++ +++ + ++R Sbjct: 577 ASIGISLYPGDGRSASELIRNADAAMYLAKAQGSN-AYRFYTESLTRAANERLSMETSLR 635 Query: 497 TALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL + +L+ QP+ + G + ++ ++ P +F+PL + L Sbjct: 636 RALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGD 695 Query: 554 QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + +VNL P L+ ++ G++ + + + P + LE+TE Sbjct: 696 WVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTE 755 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 AE ++ + L + G +AIDDFGTGY++ LKR D +KID FV+D+ + Sbjct: 756 GALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRD 815 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + DA IV +I + + L +AE VET QQ A L +LG QGYL P P Sbjct: 816 SSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAE 870 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 704 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 124/772 (16%), Positives = 235/772 (30%), Gaps = 60/772 (7%) Query: 6 NLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW---- 61 L I + + + + LA W+ + F+ W Sbjct: 197 ALGAASGILLMMIVVALGFDAYAGSRVALAYAFYCVALQVWLVQNFGIGSAFVPFWPGPE 256 Query: 62 -------RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY 114 V V+ G+ C L L A + G LC G R Sbjct: 257 YFPILQAVSVAGVVLGIGCAVLEFLQLRGRVRAAIGGFVVLSALCFLGSAWHATGYRAGA 316 Query: 115 GLTSRYVWQ---RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS 171 + S L ++ +G+ + + + + Sbjct: 317 AVLSVLAVATMVLLVRGVFSGDASLRLFTLGLGATMVGGGVQAFSVVGSGLEVGRLAAFA 376 Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 L + I R + E + + W +L++ Sbjct: 377 FPLGSLCQAAFWLAAL---------IIRLRSEHRELHELEGKQAAIMWAMPDLILVIDRQ 427 Query: 232 T-------PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 PY F + + + L L Sbjct: 428 GICLDYKQPYATRFFVTGDELLGKDVSAVLPSATAGTIRQGIERALHQGDLQSVFLDLPV 487 Query: 285 VETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + +A ++ +VR + + A D LT LPN ++ + Sbjct: 488 EGSMHHYEARIAPH--GPDKVVVVVRDITLQKHSEEKIRRLAYFDTLTGLPNRQSFLERL 545 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ- 395 + L +D + ++ G ++++ L ++ + + Sbjct: 546 DRELLRARRTNHRMALLFLDLDGFKRINDTLGHSAGDCLLQTVADRLQEKLRAGAFIARP 605 Query: 396 -----------LPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 L G E +VL +T + + R + + Sbjct: 606 ALDESSLHFARLGGDEFTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEIAVTSSIGI 665 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + LL + + ++ +TT ++ L IR L++ Sbjct: 666 ALFPDDGADAATLLKHADTAMYYAKEQGRN-NWQLYDRTLTTRTTARLALEGDIRKGLER 724 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 G+ L+ QP + G + ++ G+++P +F+P+ + L VL + Sbjct: 725 GEFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTA 784 Query: 559 LLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + + R +VN+ L + + I+ + LE+TE Sbjct: 785 ACRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTESILM 844 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 + + +L G +IDDFGTGY++ +KR +KID FV + + DA Sbjct: 845 DPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDA 904 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +I +A++ +L VVAE VET++Q A L + LQGYL P P + Sbjct: 905 GITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDE 956 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 105/573 (18%), Positives = 205/573 (35%), Gaps = 25/573 (4%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 R I ++ R + + ++ Sbjct: 346 WEGQPADLLSLRDIAERKASEQQLRLLKESLEASFNGVVIVDAIEPDMPVI---YVNPAF 402 Query: 237 DFIAGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + I GY G + + +S ++ + + Sbjct: 403 ERITGYSEAEMLGRNCRILQGNERDSLQIEEIHRGLSQAENVHVVIRNFRKDGQPFWNDL 462 Query: 294 ILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--- 347 ++ + + + + A D LT LPN LE Q Sbjct: 463 YISPIFNAQGNVTHFIGVQNDITEQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKM 522 Query: 348 -----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + +D + ++ G + + + + ++ + + ++ G E + Sbjct: 523 ALRQKHSLAILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFI 582 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L + E + + + L + R H L + DG+ E L+ Q Sbjct: 583 ILLVDLKLENDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQAD 642 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 ++ ++ + ++V L N ++ A++ LY QP + + Sbjct: 643 LAMYKAKQEGRN-NYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQV 701 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRF 575 G + +L G ++P F+P+ VLE+ + L P Sbjct: 702 IGLEALLRWQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPSV 761 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ + + N + ++Y + + + +EITE F N E ++ +++L + G Sbjct: 762 AVNISTVQFRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGV 821 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 I+IDDFGTG+++ LK L D +KID FV++I T++ DA I + I +A L+VV Sbjct: 822 NISIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVV 881 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET+QQ L + QGY +P P Sbjct: 882 AEGVETEQQFKFLQQSNCDQYQGYYFAKPMPFE 914 Score = 49.2 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/169 (10%), Positives = 36/169 (21%), Gaps = 24/169 (14%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAG 241 +++ S +A E R L + + L G Sbjct: 118 QLLRSIRYAID-RNLATTRLAESESRYRLLFEANPEPMWVFAKQGLQFLAVNQAASQFFG 176 Query: 242 YLVPVFFIIFTLG--VGKLRYPFLNLTWAV---STLCLLNYNQNFLQGVETEYSLAFILA 296 Y F + L + + FL ++ + + ++ Sbjct: 177 YSQQEFLAMTVLDIQSEEEKTRFLQFFESLICNQIVDPAVGVWAYRHKQGHLVFADVLIH 236 Query: 297 VLI-SFSVCLLYMVRIYHRSEWLNRRWHL--QALTDPLTLLPNFRALEQ 342 C L + + H QA + L Sbjct: 237 DFEFDNQPCCLILAIDITEKQAARELAHQREQAF---------RKLLND 276 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 704 bits (1817), Expect = 0.0, Method: Composition-based stats. Identities = 104/574 (18%), Positives = 198/574 (34%), Gaps = 34/574 (5%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDF 238 + + + + E R A L +L+ ++ + Sbjct: 888 FAGRQARLVLVNDITEQLKAQQKLQESENRFRRAVIDAPLPILIHAEDGEIIQVNHAWTE 947 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST-----LCLLNYNQNFLQGVETEYSLAF 293 + GY I + + + F Sbjct: 948 LTGYTHEDIPTIADWTEKAYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGETRIWNF 1007 Query: 294 ILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG- 349 A L ++ M + + A+ D LT LPN L EQ Sbjct: 1008 SSAPLGRLADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRIEQAIKR 1067 Query: 350 --------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G + + +I L ++ + + + G E Sbjct: 1068 TQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVARFGGDEF 1127 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE-TLQPLLGQ 457 +++L + M + + F + E + LL Sbjct: 1128 VILLENLTSRTEATKMAQQITDELRSSFCLQGQDFFISVSIGIT-FPSSYEESASELLRN 1186 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 ++ + + Q T+ + L +R AL++ +L+++ QPI + Sbjct: 1187 ADIAMYRAKEKGRAR-YTIFDSKMHIQATRLLELETNLRLALEREELIVHYQPIVSLTTG 1245 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKG 572 + G++ ++ G+++P +F+P+ + L VL + + + Sbjct: 1246 KLLGFEALVRWEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQMKAWQKEFSGLD 1305 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R SVNL L ++ + + K+ + + + LEITE +N E + Q+ Sbjct: 1306 KIRVSVNLSGKQLEYPHLINCLESILKQTGLEGKNLKLEITESMLMNNKEVVSDLLLQIK 1365 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 +I+IDDFGTGY++ L L D +KID FV + + IV +I +LA Sbjct: 1366 GKNIQISIDDFGTGYSSLSYLHYLPVDTLKIDRSFVNRMTQLGENFEIVEAIINLAHHLQ 1425 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + VVAE VET+Q L +LG + QGY +P Sbjct: 1426 MDVVAEGVETEQHIKQLKQLGCESGQGYFFSKPL 1459 Score = 59.6 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 36/154 (23%), Gaps = 15/154 (9%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAG 241 I+S +R A ++R + S+ L T G Sbjct: 518 ILSILSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQTGEIYCDQSWWQKLG 577 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSLAFIL 295 Y + + ++ FL + A L ++ Sbjct: 578 YEPDHETMSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGDWVWMSARG 637 Query: 296 AVLISFSVC----LLYMVRIYHRSEWLNRRWHLQ 325 + + ++ R S+ + Q Sbjct: 638 KSVANDEEGNPLKIVGTHRDITESKEIEEELKQQ 671 Score = 58.1 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 12/215 (5%), Positives = 30/215 (13%), Gaps = 36/215 (16%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD---- 203 + + + F + R I + R Sbjct: 200 RVITHEHRVIISSGEMRWHQWTNRAIVDRQGKIIEFQAVGRDITELKQIETALRELNEEL 259 Query: 204 ---------------------IAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYEND 237 + E + L + L Sbjct: 260 EQRVEQRTLQLEAQIQERQAVEKALMESEAKYERLVERLPAVIYQFSPTKGKLYCSSYVK 319 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPF---LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 I GY + + + + + Sbjct: 320 SILGYSTDEIDLPWLWINSIHPEDLPKVKEMIQEFVQGKNFEIEYRVKDAQGQWHWILDR 379 Query: 295 --LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + + + ++ QA Sbjct: 380 SIGRQAADQEMMIEGVAIDITETKKTQMALQ-QAH 413 Score = 57.7 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 9/171 (5%), Positives = 36/171 (21%), Gaps = 13/171 (7%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW------ 219 + + + L+ M+ + R + ++ R + Sbjct: 87 LDLIGGIINGALLTMMIVVTVGRQLYLGQLNI--LKKIKQALKKSRSRYRAIVEEQTELI 144 Query: 220 --LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 L + Y + + + + NL ++ + Sbjct: 145 CRFRPDGTLTFVNEAYYRYFEKTPEYLLEKIFLPLIPFPDQQQVLDNLKSLNQQKRVITH 204 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQ 325 + + ++ ++ + R + + Sbjct: 205 EHRVIISSGEMRWHQWTNRAIVDRQGKIIEFQAVGRDITELKQIETALREL 255 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 10/140 (7%), Positives = 35/140 (25%), Gaps = 8/140 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLV 244 IV H + + + T+ + + + L E + I G+ + Sbjct: 651 IVGTHRDITESKEIEEELKQQGELLQTIVDYIPVMLAYIDPNYNFLWVNEEFERILGWSL 710 Query: 245 PVF-FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + + + + + T + A + + Sbjct: 711 EEIKNLNILAQLYPDPDERQYVMNYIQSAEEKWEDFKTRLRNGTT--IDTSWANVKLSNG 768 Query: 304 CLLYMVRIYHRSEWLNRRWH 323 ++ + + + + Sbjct: 769 AIIGIGQDITVRKHIEEALR 788 Score = 42.6 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 12/149 (8%), Positives = 28/149 (18%), Gaps = 14/149 (9%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYL 243 MI ++ + + L V+ + + I G+ Sbjct: 391 MIEGVAIDITETKKTQMALQQAHQCLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWK 450 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAV 297 + L+L A + +V Sbjct: 451 EEEVVGKGWQEWQFVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSV 510 Query: 298 LISFSVCLLYMVR---IYHRSEWLNRRWH 323 S +L ++ + Sbjct: 511 QYDQSGEILSILSLVLDVSEQKRAEAALQ 539 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 704 bits (1817), Expect = 0.0, Method: Composition-based stats. Identities = 111/572 (19%), Positives = 216/572 (37%), Gaps = 33/572 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLV 244 I A ++ S K A ++ A ++++ ++ I GY + Sbjct: 229 IGKLGLAFNQMSEALSNSERSMKLAASIYQSNADAIMVTDENNLIVDVNPAFTRITGYTL 288 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + ++ A+ + Y+ +++L Sbjct: 289 DEVRGKNPRIMQSGKHDNEFYRHMWQAILNEGHWQGEIWDKRKTGEIYAKLAHISILRRS 348 Query: 302 SVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + + QA D LT LPN R L E Sbjct: 349 DGGVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPNRRLLNDRLAHALAANKRNEDCG 408 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-- 408 + L +D + ++ G + + R + ++E + + ++ G E +++L Sbjct: 409 ALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVVLLENLGA 468 Query: 409 ---ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + H+ + S ++ N E+ + L+ Q Sbjct: 469 DIKDATQAAAHIAEKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAM 528 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYD 520 Q+ A+ + + L + +R A+ + L L+ Q + G + Sbjct: 529 YQAKEAGRN-AVRFFDPQMQQSVETIAALESDLRHAVHERQLQLFYQIQLDHTHHPVGAE 587 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVN 578 +L + G+++P +F+P + +L VL+ + +A + +VN Sbjct: 588 ALLRWIHPVRGMVSPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTRDLVLAVN 647 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK-FGFRI 637 + Q + ++ + +++ I P + LE+TE A + + + L G + Sbjct: 648 ISARQFKQPDFVEQVGAMIRKHAIQPARLKLELTESIALEELDVIITKMHALRNGLGISL 707 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ LKRL D IKID FV+D+ ++ DA++V++I D+A + V+AE Sbjct: 708 SLDDFGTGYSSLSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAE 767 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q LL + G QGYL GRP PL + Sbjct: 768 GVETAGQFFLLKQYGCLLFQGYLFGRPVPLRE 799 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 704 bits (1817), Expect = 0.0, Method: Composition-based stats. Identities = 125/685 (18%), Positives = 235/685 (34%), Gaps = 39/685 (5%) Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 L + G Q +C ++ T + +W+ L Sbjct: 554 AFARGIALRLPKRYLDKLKGLQIGPAAGSCGTAAYERRTVVVADIQQDLLWRNYRDLARR 613 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + SM ++ S + + + + ++ + + Sbjct: 614 FGLRACWSMPILSSNQQVLGTFAVYSREVRVPEQR---------EMELVSACSHIAGIAI 664 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-LLLCTPYENDFIAGYLVPVFF-- 248 H ++ + ++ + ++ + + GY Sbjct: 665 ERHHSEEQLKLLETSIARLNDIV-LIAEADSEGKQNPRIIFVNKAFERLMGYTAEEVLGK 723 Query: 249 -IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---C 304 F G + + + + E L + + + + Sbjct: 724 DPGFLDGPNTQMEELWRVKALLKQGESVRTELVNYRKNGEEIWLEMDILPIANSAGVFTH 783 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLR 356 + + R + R A D LT LPN L EQ + L Sbjct: 784 WVSVQRDITERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLD 843 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-----PETE 411 +DN + ++ +G + + + LL ++ + + +L G E ++V+ Sbjct: 844 LDNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAA 903 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF-DGNQETLQPLLGQLSWLAEQSCA 467 + + + S+ + F + Q T+ LL + ++ A Sbjct: 904 QEASLVADKILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKA 963 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILAR 525 + + TK+ + +R AL + ++ LY QP + G + ++ Sbjct: 964 AGRN-TFRFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQGSLLGAEALVRW 1022 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLT 583 G+++P F+ L + L VL + L + G SVN+ Sbjct: 1023 EHPQQGLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQ 1082 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L Q + R+ + K +PQ++ LE+TE N E + + L G ++DDFG Sbjct: 1083 LHQHDFIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFG 1142 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL +KID FV+D++ ++ DA IV++I L + VVAE VE+ + Sbjct: 1143 TGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWE 1202 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 QQ L K G QGYL GRPQP Sbjct: 1203 QQQFLEKHGCLEYQGYLFGRPQPAE 1227 Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 17/217 (7%), Positives = 45/217 (20%), Gaps = 16/217 (7%) Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 R W + + S F K + + + L + Sbjct: 289 LGRMSRARWDFIAHTFAELGLVEPGYSLDGFLWKDGDDATNPLVNWFMAGALFTGIVAGL 348 Query: 179 YNMLFYYLTRMIVSPHFAQ----ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 + + R + A R +++ A+ + + Sbjct: 349 VLLWNLQIRRRVRERTQALHEEVRQRRMVEMELQSSQEQVRLTFHSASAGIAMTSVDGQF 408 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL----NLTWAVSTLCLLNYNQNFLQGV 285 L I GY + + R + + + Sbjct: 409 LLVNPAFCEIVGYSEDELKKMHCRDLNDGRNELDAWKNRQWLLEGKIDRSVVEKRYTTKS 468 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLN 319 + +++ L+ +V + + Sbjct: 469 GRSVWVRISASLIKGPDGSPRNLIKVVENIEQQKRQE 505 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 100/570 (17%), Positives = 207/570 (36%), Gaps = 33/570 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 + RM+ + R + E + A + I GY Sbjct: 361 AVWRMVRDISEKRAAEERVQLAAKVFENTVEGIMITDAD---RRIRSVNRAFTEITGYTQ 417 Query: 245 PVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 + + +++ + Y + + Sbjct: 418 HEVLGQKTSILSSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLAINAVRNS 477 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRID 358 + + + + R A D LT LPN ++ E + D Sbjct: 478 LGEITHYVAIFSDLTERKAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVR----D 533 Query: 359 ------------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + ++ G ++ + +M E L + G E +++L Sbjct: 534 NQRLALLLLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIILLP 593 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 G + + I +N L + + + + L+ Sbjct: 594 VISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYPDDGRDYETLVRNADAAMY 653 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 + + + ++ + + + + + +R AL++ + +L+ QP + G + Sbjct: 654 HAKSSGRN-SYKFYTADLNARAREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAE 712 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNL 579 ++ G++ P +F+ + + + V+ + L ++NL Sbjct: 713 ALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINL 772 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L Q ++A ++ + + + A+ +E+TE +A++++ I+ + G R++I Sbjct: 773 SALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSI 832 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR +AD +KID FV+DI + D+ I R+I ++AK ++ VVAE V Sbjct: 833 DDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGV 892 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET +Q L + G ++QGYLI +P P D Sbjct: 893 ETMEQWQFLEQEGCDFVQGYLIAKPLPADD 922 Score = 62.3 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 22/227 (9%), Positives = 48/227 (21%), Gaps = 19/227 (8%) Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 + L ++ + I S +L D+ F L Sbjct: 157 LMILAAQLVLSIMLIMSILHSRFLSPMKLLTEQARLLAELKLDSPFEWSRRDELGRLGTH 216 Query: 179 YNMLFYYLTRMIVSPHF-------AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 L R++ R E + L W +++ L Sbjct: 217 LEWTRSELKRLVDELRAKTLALEADIARRREVEDALRRSENKYRELFWSNLDGIVISSLD 276 Query: 232 T-----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL----NYNQNFL 282 + Y + + L + + + +L Sbjct: 277 GQVIDANPAFLNLMCYSLDQLKQQNFWSLVAEESEALERFNLDNKVLRFGYCDEFEATYL 336 Query: 283 QGVETEYSLAFILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQA 326 + + ++ + + + VR R L A Sbjct: 337 NRFDNQVPVSVKTVAMRDAFGRINAVWRMVRDISEKRAAEERVQLAA 383 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 110/565 (19%), Positives = 216/565 (38%), Gaps = 25/565 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL-SVLLLLLCTPYENDFIAGYLVPV 246 R I ++ + + + + + + + + G+ Sbjct: 477 RDITERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEE 536 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 + F A+ + + ++ ++ ++ Sbjct: 537 VMGREVEMLYDNVAVFDEANRALLSSGEWRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQ 596 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + + + AL D LT LPN R L + + + Sbjct: 597 AIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLFI 656 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL------SGPE 409 +DN + ++ G M +R + L ++E++ + +L G E +++L E Sbjct: 657 DLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMGDFGEDHDE 716 Query: 410 TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 ++ + + S + + + + F+ +T LL + Q+ Sbjct: 717 ALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQAK 776 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-GEGYDEILAR 525 A A+ + + + +L + + + ++ + +L+ Q + G + ++ Sbjct: 777 ASGRN-AMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVDSRGIIGAEALVRW 835 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLT 583 G++ P +F+P + L VLE+ LA+ + SVN+ L Sbjct: 836 QHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSLQ 895 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q + ++I + R +PQ + LE+TE + + ++ + L G A+DDFG Sbjct: 896 FCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDFG 955 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 GY++ LKRL D +KID FV+D++T+ DA IVR+I LAK+ L+V+AE VET Sbjct: 956 IGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGVETGA 1015 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ L G QGYL RP PL Sbjct: 1016 QKDFLASHGCTAYQGYLFSRPLPLE 1040 Score = 43.4 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 22/279 (7%), Positives = 48/279 (17%), Gaps = 25/279 (8%) Query: 68 LCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF- 126 ++ LGS+ ++ + + Sbjct: 227 RRASLGGYVYAPFRMVDFVRATLGSELDILDLRIFDGKAMAEDSLLFDSVKHRSGPSPVP 286 Query: 127 ----WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN-M 181 + + F+ +K F V L ++ + VL N Sbjct: 287 KFKRVIPISLYGQTWALEASSRPAFEKAIKNYEALLVLLGGFVVSMLTAMVSFVLSGNKE 346 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 L + A + + R + + L + ++ Sbjct: 347 KAAALGHVNKKLLLAMEEQQATTRELSNAKLRTERILESITDA--FYTLDREWRFTYVNK 404 Query: 242 YLVPVFFI-IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY------SLAFI 294 + L F E+ Sbjct: 405 EAENLLQRNREDLLGRVCWEEFKETAGTTFDREYHRALMENRTVTFEEFYVPLDEWFEVH 464 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNR-------RWHLQA 326 R + + R QA Sbjct: 465 AYPSEEGLTVY---FRDITERKESEQARQEAHVRIRQQA 500 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 111/708 (15%), Positives = 220/708 (31%), Gaps = 41/708 (5%) Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 + + A G++ + G Sbjct: 281 HDAVVFGEMKMVWIGLLDERDGMVHPAAAYGDGTEYLDGIRIAFDSASPFGRGPSGSALR 340 Query: 119 RYVWQRLFWLGLVTPIGIKC---SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 + + + PL ++ + + A Sbjct: 341 LDKPVWCQDFANDPATSAWHERGARHGYRASAALPLHRGGKVFGVLNLYA-GECHAFDEA 399 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL------ 229 + + R A + E++ L+ + + Sbjct: 400 AQRLLVEMAMDIDFALDRFEQDAERARLAAAIVDSEEKYRELTESINDVIWTVDPETRCF 459 Query: 230 LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNY--------N 278 ++GY I L + + ++ + Sbjct: 460 SYVSPAMRRLSGYAPHELIDAPIERLLKPEYVAEMRERMALHLAEFHVGKRKSEDYSVEE 519 Query: 279 QNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + + ++ + R A D LT LP Sbjct: 520 VELGRRDGGTVWAEVVTTLGLNRRSGRVEFRAVARDISERRAAEAEIQRLAHYDQLTGLP 579 Query: 336 NFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N ++ + + +D+ + ++ G + + R L ++ Sbjct: 580 NRSLVKDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVL 639 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 + + + +L G E + +L + L ++ + ++ L + + Sbjct: 640 RGGDTVCRLGGDEFVFLLPD-TDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMY 698 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + L Q+ E + ++T+ +LL N +R ALD+G Sbjct: 699 PDDGTDFDTLSRNADAAMYQAKREGRN-GFRFFTEAMQARSTRTLLLANALRHALDRGQF 757 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L+ QP + G + +L + G ++P +F+P+ L A+ VL + Sbjct: 758 SLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVA 817 Query: 562 WLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + +VNL N+ + ++ + + P V LE+TE A + Sbjct: 818 QSRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDP 877 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 +S++ ++ L G R++IDDFGTGY++ LKR + +KID FV+DI + D IV Sbjct: 878 QSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIV 937 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I LA + + VAE VET Q L + G +QGY RP P Sbjct: 938 SAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAE 985 Score = 62.3 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 16/256 (6%), Positives = 40/256 (15%), Gaps = 13/256 (5%) Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 L+ A + + + L + ++ W G P Sbjct: 9 RRHAPGLARSAPARVRALASALSLAFVLGTASAPVCALPPAVFQTHLDPGGDWSGKGHPG 68 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 L + + + +L F + + Sbjct: 69 EGGLLGALAHVVGHDAAHALFSPVARNTLLGLAGTGALL---------FGGVLLLRARVR 119 Query: 195 FAQILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 L + L + E + + + Sbjct: 120 ARTRELEGVNRQLGATLDAIPDLLFEMDGEGRYLA-VHANREAQLQRPVEALLGRRVDEV 178 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA--VLISFSVCLLYMVRI 311 L + Q + +A + + R Sbjct: 179 LPAPAAQTCLAALAEAGRHGWSSGQQIEITIDNQPQWFELSVARKADDGGPAHFIVLSRD 238 Query: 312 YHRSEWLNRRWHLQAL 327 + Sbjct: 239 ITARRRAEASVQRLSR 254 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 113/549 (20%), Positives = 211/549 (38%), Gaps = 24/549 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 + +K A + AA +L+ ++ I GY + + Sbjct: 517 RVQADANQKLASKVFENAAEGILITGADYRIIAVNQAFTRITGYPPELVIGRVSRIFRDN 576 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRS 315 + + ++ + Y ++ + + + + Sbjct: 577 TSWSVAMLDGLARHGHWQGEMLDRRRSHEWYPAELSISAVRDDAGAITNYVGVFADITVR 636 Query: 316 EWLNRRWHLQALTDPLTLLPNFRAL----EQAPEQ----EAGKSFCCLRIDNLEFMSRHY 367 + R A DPLT LPN L E +Q + L +D + ++ + Sbjct: 637 KQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRFKLINDSF 696 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---R 424 G +R L ++ ++ +L G E L++S ++ L + + + + Sbjct: 697 GHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLVSHFASQATLSTLAEDILAVLAQ 756 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + L + + + + LL ++ ++ Q Sbjct: 757 PLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGKN-TYQFFAAEMNAQ 815 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPL 541 +++ L +R AL++G+ L+ QPI E + +L + G+++P +F+PL Sbjct: 816 AIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFIPL 875 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L V+ + LA C R ++NL Q+ + ++ Sbjct: 876 AEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQVAGALAEA 935 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 I+ + LE+TE N ++ + +L G R++IDDFGTGY++ LKR D + Sbjct: 936 GIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTL 995 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F++ + + +A I +I +A+ S SVVAE VET+ Q A L G Q LQGYL Sbjct: 996 KIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYL 1055 Query: 721 IGRPQPLAD 729 RP P A+ Sbjct: 1056 FSRPLPAAE 1064 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 16/169 (9%), Positives = 38/169 (22%), Gaps = 9/169 (5%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + T+ L F L I +R+ E R L Sbjct: 354 EQTLTLDGLPGDFLVTKFPLFDADGLPAGIGCIATDITQNKRERQAKQEAENRYHALIEQ 413 Query: 221 AALSVLLL----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL-- 274 + + + +L L + + GY V L Sbjct: 414 SLVGIYILQDECLAYVNDKLAEMLGYPGEELQGERIETVLAHEERQRLRQQITQRLSENI 473 Query: 275 --LNYNQNFLQGVETEYSLAFILAVLISFS-VCLLYMVRIYHRSEWLNR 320 ++++ ++ + + ++ +V + Sbjct: 474 SIMHFSARLVRKDGQLLDVEIHSRLFEYRGRSAIIGVVVDISDRVQADA 522 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/378 (9%), Positives = 75/378 (19%), Gaps = 68/378 (17%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHS----SYIFLAWMPLCVMLSILFIFGWRGVVPVLCG 70 + I F+ + + LAW L+ G + ++ G Sbjct: 28 ATSAPGPASFIPHGLFLLWAVRHPARSVWLWPLLAWGLASQWAGPLWAGGLALSLYLVAG 87 Query: 71 MFCTNLWNFHL----------------------------SFLQTAVMLGSQTFVVLCACA 102 + +Q +G L C Sbjct: 88 AARLAGIHHARLTLNSLSSLLRLLSSLLLAPAAAAALLLWGVQAFSGVGVPLVQALLQCG 147 Query: 103 ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP---IGIKCSMYLVGSFFDFPLKISTFFGD 159 L L +R + L+ + + ++++ G P+ + + Sbjct: 148 ALALALVLCVPAAFAGVEYSRRRYLELLLIALVTLALWVAVFVAGHVSLVPIHLLLYPCL 207 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFY--------------------YLTRMIVSPHFAQIL 199 A + +LI + + L Sbjct: 208 LWAACRAGIGGATLLGLLILVLATFLDGPSFQPVPLPANGIVLNLALVLSAQLVATQSEA 267 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFI---IF 251 R I R + + L L G Sbjct: 268 AARRIRQLQDSLARFEAWLRNSPNVMSLKDLEGRYLLVNRAYSRALGKAPAELIGKKSAD 327 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 L + R +S L Y Q L + + Sbjct: 328 FLPPEEARATAEQDRQVLSALESRQYEQTL-TLDGLPGDFLVTKFPLFDADGLPAGIGCI 386 Query: 309 VRIYHRSEWLNRRWHLQA 326 +++ R+ +A Sbjct: 387 ATDITQNKR-ERQAKQEA 403 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 104/566 (18%), Positives = 209/566 (36%), Gaps = 32/566 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLV 244 I+S + + A T+ +++ ++ + G+ Sbjct: 526 IISVIEDISSQKENEAILRQS----ATVFDNTREGIMITDKNAQIIRVNPAFAELFGFSQ 581 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS- 300 + + ++ +++T + L ++ + + Sbjct: 582 HELQGKTPVIFKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRND 641 Query: 301 --FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + + + A DPLT LPN L Sbjct: 642 KQQLTHYVSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNHHRI 701 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ +G + ++ + R L ++ ++ + +L G E +++ G Sbjct: 702 ALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIEGNPA 761 Query: 411 EGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 ++H + N + +G + + +T + LL Q ++ Sbjct: 762 LHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMYRAK 821 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 AH + ++ +++ L ++ AL +L LY QP + G + ++ Sbjct: 822 AHGR-SCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALV 880 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPL 582 G+++P +F+P+ + L + VL + +VN+ P+ Sbjct: 881 RWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPV 940 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 NI + K+ + LE+TE ++ ++ + L K+G R+AIDDF Sbjct: 941 QFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDF 1000 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D++KID FV DI D I +I +A L V+AE VET+ Sbjct: 1001 GTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETE 1060 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q L + G QGYL+ P P Sbjct: 1061 EQLTFLKEQGCDCYQGYLMSPPVPAD 1086 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/207 (7%), Positives = 48/207 (23%), Gaps = 11/207 (5%) Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFT-VVDLLSLFTAVLIYNMLFYYLTRMI 190 + Y+ + + + + + A +V ++L ++F Sbjct: 342 AEATDVVASYIPVRYSGWHILVQQDRAEIYAPLHNLVYWITLVVFFAGLLVIFVVSLLWR 401 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTL---SWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 + Q+ +R + K F L + ++ + GY Sbjct: 402 QQQYTNQLELQRQTSEKDRLLKHFFELPLFGMAITHGQTGHWIRFNHQLSDLLGYSHSEM 461 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVLISFSV 303 ++ + LC + + + + + Sbjct: 462 AEHTLLSLTANEYQEADIAAMYQMTQDLCDGYLCEKQLRRKDGQLIYVNVDTRCVRTADR 521 Query: 304 C---LLYMVRIYHRSEWLNRRWHLQAL 327 ++ ++ + A Sbjct: 522 NIAFIISVIEDISSQKENEAILRQSAT 548 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 117/747 (15%), Positives = 241/747 (32%), Gaps = 41/747 (5%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLC------ 69 ++ +L + Q + ++P ++ + L ++ ++L + R + + Sbjct: 232 MSRSLALPNGQWTLGLTPAQGWGAAGVLALRCALGLLFALLMAYLARLLFALKAHERGLA 291 Query: 70 ---GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAI-LRWQLGTRWRYGLTSRYVWQRL 125 + + T + F + G + + + + Sbjct: 292 DQVAQRISEIQATQQQLRATIDAIPDPLFEIDQDGRYCSVHSQRAELLMGPAEQLIGRNV 351 Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN-MLFY 184 + + + + D T +L + Sbjct: 352 TEVLPTLAALSVLDVLHEAQAQGWSVGRQIMLDLPDLGPTWFELSAARKPQAAGAKPRII 411 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 L+R I +Q + + ++ I GY Sbjct: 412 LLSRDITERKRSQEQLQLTAQVFDQSSEAIVIADASHR------IVRINRAFSRITGYQE 465 Query: 245 PVFFIIFTLGVGKL----RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + ++ + + Y ++ + Sbjct: 466 SEAVGQSVRLLTMAEAGPDCNADAVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRD 525 Query: 301 F-----SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQE 347 + + R R A DPLT LPN L + + Sbjct: 526 GDANGPITHSITLFRDISLQREAQERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQARG 585 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D+ + ++ G + + ++ R L L+ + + +L G E LL+L Sbjct: 586 GQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGPQDTVSRLGGDEFLLLLPA 645 Query: 408 PETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + +L ++ + L + E+ L + + Sbjct: 646 TSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSA 705 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + +T + + + N +R AL++ L+ QP + + G + + Sbjct: 706 KQSGRNR-YGFFTADLQARTARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEAL 764 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMP 581 L + G++ P +F+P+ VL + + + R SVNL Sbjct: 765 LRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSA 824 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + + R ++ + + + LE+TE A + +++ ++QLH G R+++DD Sbjct: 825 VQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDD 884 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR Q +KID FV+D+ + D IV +I +A+A + AE VET Sbjct: 885 FGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVET 944 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q L G QGYL RP P Sbjct: 945 DGQLQFLRAQGCDEGQGYLFSRPLPAD 971 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 94/564 (16%), Positives = 191/564 (33%), Gaps = 29/564 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R I + R + + A + ++ + + GY Sbjct: 486 RDITERQKREERMRLSSRFLEDTNE---AVVITDADARII---EVNRAFEKLTGYSRQEA 539 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISF 301 + + + T + + ++ + Sbjct: 540 IGQNPRILQSGHYDADFYREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISAVYDQRGR 599 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 + + ++ + D LT LPN +Q + Sbjct: 600 ITHYVGISNDLTATKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEHKVALL 659 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 +D + ++ G + + + + L + + + + G E L+L Sbjct: 660 IFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDEFYLLLGRLTDIDT 719 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + S+ + L + F + E ++ L+ + + Sbjct: 720 AVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAMYHAKKDGG 779 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKE-GEGYDEILARLK 527 + +E + ++ + N +R A++ + LY QP + G + ++ ++ Sbjct: 780 N-SFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQ 838 Query: 528 YDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL 585 + G ++P +F+PL + L VL + R +VNL + Sbjct: 839 PERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFK 898 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + I + + + + + LEITE + ++ + +L G +A+DDFGTG Sbjct: 899 QPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTG 958 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK D +KID FV+D+ T+ D ++ +I LA + + VVAE VE Q Sbjct: 959 YSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQV 1018 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 A L + G QGY RP P + Sbjct: 1019 AFLRQRGCDVFQGYHFSRPLPAKE 1042 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 21/222 (9%), Positives = 46/222 (20%), Gaps = 19/222 (8%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 +++ + ++ + LL L A L+ N++F+ + I S Sbjct: 15 WLLGFVLLQVLGVAVLVAVQDLSPTEPANRITLLWLLAAALVTNLIFWLILHQIQSHRRV 74 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLA--ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 Q + ++ A W L P + Sbjct: 75 QQELMVSSSQLRKAQQIAKMGHWEWKHDDQPLHWSAELYRIFGQDPESYTPDYQAFLATI 134 Query: 255 VGKLRYPFLNLTWAVSTLC-LLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVR 310 R + E + ++ ++ + Sbjct: 135 PEDDRRQVQEAVAHTQREGVPYDITHRIRLPNGREKIIHERGELIRDEQGRPVKMMGTAQ 194 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSF 352 + N L A E G + Sbjct: 195 DVTAQKQAEEELQ------------NRLRLL-ALNAEMGMAL 223 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 112/581 (19%), Positives = 226/581 (38%), Gaps = 27/581 (4%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 A+L + L R + ++ L ++ + ++ + +A V + Sbjct: 665 AAILGWFYDVTDLRRAQDALLLSEALAKQSLEELKYQKYALDKHAIVAVTDVKGRITYAN 724 Query: 234 YENDFIAGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + I+GY + + F + V+ + + + Y Sbjct: 725 DKFSEISGYSIEELLGQDHAILNSGYHPKGYFKEMYRTVANGQVWHDEICNRAKDGSLYW 784 Query: 291 LAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 + +A I + + + + + + AL DPLT LPN R L Sbjct: 785 VDTTIAPFIGDDGKPQSYISIRTDITQRKAAEDKSNYLALYDPLTNLPNRRLLLDRLTHA 844 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 G + L +D+ + ++ G + ++ + L ++E + + +L G Sbjct: 845 LASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVARLGGD 904 Query: 400 ELLLVLSGPETEG-----RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L G + + + + + + + + F N Sbjct: 905 EFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKNNLKS 964 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL Q Q+ AL + + +V + + +R ALD+ + L+ Q Sbjct: 965 DELLKQADIAMYQAKKLGRN-ALSFFDPKMQEGIQARVDMEHELRKALDKNEFQLFYQMQ 1023 Query: 512 R--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC- 568 + G + ++ + + G++ P++F+ + + V+++ L Sbjct: 1024 VGLSDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLKRWEQS 1083 Query: 569 -DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + SVN+ Q + ++ R+ I+P + LE+TE + E ++ + Sbjct: 1084 ERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHIEDAVAIM 1143 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L G R ++DDFGTGY++ + L+ L +KID FV+DI ++ + IVR+I +A Sbjct: 1144 NALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAMA 1203 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +L+V+AE VETQ QQ +L G + QGYL P P+ Sbjct: 1204 HTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPID 1244 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 13/163 (7%), Positives = 36/163 (22%), Gaps = 8/163 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 V + + + + ++ L R+ + + W A+ + Sbjct: 398 WVHERGTSDYDAAGNPTYSRGTVQDVTERQNSEALIRKTESYLTNILNSVEEVIWTAS-A 456 Query: 225 VLLLLLCTPYENDFIAGYLV----PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 + + + G + L AV + Sbjct: 457 PDFRVNHVNAAIEKLCGLSQQALIDDIEVWINLIHPDDCAQAKLAMKAVFEQSSVALEYR 516 Query: 281 FLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNR 320 + T ++ V+ S L+ ++ Sbjct: 517 IVLADGTVRWVSDSRHVVYGESGESAELVCVIHDVTAKRLAAD 559 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 21/252 (8%), Positives = 50/252 (19%), Gaps = 27/252 (10%) Query: 106 WQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFT 165 + + R W + L + YL ++ + + Sbjct: 200 FLMMDRRTLSAVEHAKWVATIFRILFILVAFWSIFYLWRAYRALHSTLGASADEVYQHIF 259 Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 V + + + + + + R+ L A Sbjct: 260 RVGAGDFSIPITVKPAQDNSVLAELAKMQSLLHAHDVERTHAEQSLHRSKALLVEAQH-- 317 Query: 226 LLLLLCTPYENDFIAGYLV--PVFFIIFTLGVGKLRYPFLNLTWAVST------------ 271 + + D++ G L+ + IF + + AV Sbjct: 318 --IAQVGSWSLDWLTGELIWSEEIYHIFETDQHQFHANYEAFLNAVHPCDREAVDCAFKA 375 Query: 272 ----LCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHL 324 L + + + V+ + Sbjct: 376 SVVSHTPYEITHRLLLADGSVKWVHERGTSDYDAAGNPTYSRGTVQDVTERQNSEALIRK 435 Query: 325 QALTDPLTLLPN 336 LT + N Sbjct: 436 TESY--LTNILN 445 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 113/670 (16%), Positives = 221/670 (32%), Gaps = 35/670 (5%) Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 L S + + + V+ R + P + ++ Sbjct: 710 LDSILRSLDDVVWSASLENQQFIYLNPATERVYGRPVSDFVDCPSLWQFVIHPDDRQRVE 769 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP----HFAQILWRRDIA 205 + + V L Y R I ++ A Sbjct: 770 RASNRMMHQGSKDLEYRVVRPDGEVRWLRDRARLIYDHRGIAIRMDGIATDMTKRKQAEA 829 Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFII----FTLGVG 256 L E++ LA + + + L GY + + Sbjct: 830 ALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDALGYTAQELLALTFTEISHPTE 889 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + + + + L L + + + + ++ + V Sbjct: 890 RALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAILKVVLVRDAQGQPLHYISQVVDIS 949 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMS 364 + + + A D LT LPN E + L +D + ++ Sbjct: 950 DRKRMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAGQRWDYLCAVIVLDLDRFKVIN 1009 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G ++ + +I L ++ ++ L +L G E ++L + + Sbjct: 1010 DSLGHLVGDRLLSAIAERLQGCLRPSDTLARLGGDEFTILLDDIPNTAAATDIAKSIHQT 1069 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + + LL ++ + + Sbjct: 1070 LESSFNLDGYEVFATASIGIALSGMGYHRAEDLLRDADTAMHRAKLQGTA-CYVMFDTAM 1128 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 SG+ Q+ L +R A+++ +L +Y QPI + + G++ ++ + G+++P F Sbjct: 1129 SGRALAQLRLETELRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQGMISPGAF 1188 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIR 595 +PL + L VL + L SVNL Q N+ +I + Sbjct: 1189 IPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQIAQ 1248 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + ++P + LEITE +++S+ +E+L ++ IDDFGTGY++ RL + Sbjct: 1249 IIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSSLSRLHQF 1308 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV + + IV++I LA + VVAE +ET Q A L +Y Sbjct: 1309 PIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRRCEY 1368 Query: 716 LQGYLIGRPQ 725 QGY +P Sbjct: 1369 GQGYFFSKPL 1378 Score = 72.3 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 13/150 (8%), Positives = 33/150 (22%), Gaps = 8/150 (5%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 F + I A+ R+ + + W A+L + + + Sbjct: 683 LTHFVGIQTDITKRKQAEEALRQSEEKLDSILRSLDDVVWSASLENQQFIYL-NPATERV 741 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSLAFIL 295 G V F +L + S + ++ L Sbjct: 742 YGRPVSDFVDCPSLWQFVIHPDDRQRVERASNRMMHQGSKDLEYRVVRPDGEVRWLRDRA 801 Query: 296 AVLISFSVCLL---YMVRIYHRSEWLNRRW 322 ++ + + + + Sbjct: 802 RLIYDHRGIAIRMDGIATDMTKRKQAEAAL 831 Score = 71.5 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 5/145 (3%), Positives = 28/145 (19%), Gaps = 9/145 (6%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + + + ++ + ++ + + GY Sbjct: 564 VLALAIGHQQSEANLYLMQRAIAASNNGVIITDPNQPDNPVI---YVNPAFESMTGYTAK 620 Query: 246 VFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F + L A+ + + + + ++ + Sbjct: 621 EVIGHNCRFWQEPDYNQAGVTKLATAIQEQRECHVILQNYRKDGSTFWNELYVSPVFDGD 680 Query: 303 V---CLLYMVRIYHRSEWLNRRWHL 324 + + + + Sbjct: 681 GYLTHFVGIQTDITKRKQAEEALRQ 705 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 111/565 (19%), Positives = 191/565 (33%), Gaps = 29/565 (5%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC---TPYEN--DFIAGYLVPVF 247 + GKE L L + + I G F Sbjct: 937 LSQTIAELHQVEEILRGKETHYRQALNLTNTGSWEFDLASEKVFWSEQVEIIWGMKPGTF 996 Query: 248 FIIFTLGVGKLRYPFLNLTWA-----VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F + +L + N + + + + I Sbjct: 997 RGEFDQVKAGIHPQDFDLWQQNVQACIEEGKEHNLEFRVVHPDGSIHWVQAIGNAEYDSQ 1056 Query: 303 VC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKS 351 L ++ + R + A D LT LPN L+ +Q + Sbjct: 1057 GHPIRLRGLIMDVTERKTSQERLNYMAHHDHLTDLPNRLLLKARLDQSIQQATRKRTKLA 1116 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G ++ + + L +++ ++ + ++ G E + VL E Sbjct: 1117 VVFIDLDRFKHINDSMGHAAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAVLEDIEDI 1176 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 +V L + M F + LL ++ Sbjct: 1177 QHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSLFPDDGMDTAILLRNADSAMYRAKEE 1236 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILAR 525 E ++ + VL N +R AL + + L QP + G + +L Sbjct: 1237 GRN-TYCFYAEEMTSAAFEYVLFENALRGALKRNEFYLVYQPQIDLSSHRWVGMEVLLRW 1295 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 + GI++P +F+P+ Q L VL T +VN+ + Sbjct: 1296 HHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYRACCQAKTWLDQGIDFGHIAVNVAAPQI 1355 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q N + + + LE+TE E + +E L G +AIDDFGT Sbjct: 1356 QQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDFGT 1415 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL + +KID FV+DI +T D I ++ L KA +L ++AE VE + Q Sbjct: 1416 GYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDMAISEAVIALGKALNLRIIAEGVEQEIQ 1475 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L + G QGYL +P P + Sbjct: 1476 ATFLREKGCHEAQGYLYSKPLPPEE 1500 >UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y83_COLP3 Length = 1071 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 108/634 (17%), Positives = 223/634 (35%), Gaps = 36/634 (5%) Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVV---DLLSLFTAV 176 L + ++YL + + A V + Sbjct: 426 QAIDSLVLYITTFILVFITTLYLSFLAVRRIVAKIKYISTAMTTMEVEHKFNQPLKVKGK 485 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL-GKEKRAFTLSWLAALSVLLLLLCTPYE 235 + + +M+ ++ R A E T + + Sbjct: 486 DEISDMVIAFNQMLAERIKSEGEQRISAAVFKYASEAIMITNAEN-------RIETVNPA 538 Query: 236 NDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 I+G+ + + + + ++ + Y Sbjct: 539 FCHISGFSIEEVLGKSPNILNSGKHDNHFYQKMWQSLEQDNSWQGEIWNKRKNGEIYPEF 598 Query: 293 FILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG 349 ++V+ + + + + + LQA D LT LPN + + Sbjct: 599 LAISVVRDQDKKPLQYISLFSDITKHKKYEEDIWLQANYDSLTGLPNRGLCVERLHNKLK 658 Query: 350 --------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D +F++ +G ++ L ++E + + + G E Sbjct: 659 GDKAEDSEVALLFIDLDRFKFVNDTWGHSSGDELLKLAAIRLRNCIREKDTVARFGGDEF 718 Query: 402 LLVLSGPETEGRLQHMVNILN---SRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +++L G ++ +V + S H NN + + + ++ LL Sbjct: 719 VVLLVGLSNRFAIERVVKNILTSLSMPFHLRNNNEAVVSASIGVTIGPVDGDNVELLLKN 778 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 Q+ A + ++ ++++ + +R A+ + + +L+ QP+ + Sbjct: 779 ADTAMYQAKAAGRN-TFQFFTKSMNETVSRRMHIEQALRQAIKRQEFVLHYQPVVSLDTG 837 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 E G + ++ D G++ PD F+ + + L V+E L + Sbjct: 838 EIIGAEALIRWQHPDKGLIYPDSFIEIAEEAGLIEPIGQWVIEQACTDLRYWHDLGLKIQ 897 Query: 575 FSVNLMPLTLLQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VN+ Q + I I + K +ISP ++ +EITE N+E M ++ + Sbjct: 898 VAVNVSSRQCKQTSQTPIKDIIKKALKVNNISPSSLKVEITESSLMDNSEEMMTTLQDIR 957 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G I +DDFGTGY++ LK D++KID F+ + + DA +V ++ + + S Sbjct: 958 SLGVAIYMDDFGTGYSSLSYLKHFPIDVMKIDRSFIAGSIDDKTDASLVEAVVLIGHSLS 1017 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 L +V E +ET+Q L LG Y QGY I +P Sbjct: 1018 LKLVGEGIETKQHYDYLRSLGCDYGQGYFISKPI 1051 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 101/609 (16%), Positives = 202/609 (33%), Gaps = 33/609 (5%) Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 G V + L ++R I + Sbjct: 294 IAAFPIPRGGRPFAVLSVYHQHIDAFDGESIALLDEMSRDIS-FSLDNFDREVQRKAAEQ 352 Query: 210 KEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYP 261 + A ++ ++ +++ ++ I GY + Sbjct: 353 SLQLAASIYENSSEGMMITDADNLIMAINPAFTRITGYAMEDVIGKNPGILKSGRHDMDF 412 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWL 318 + + + + Y + + + + + + + Sbjct: 413 YQAMWNEILGTGKWIGEIWDRRKSGEVYPKWLTINTVFNDDGKVHHRIALFTDISQKKES 472 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLM 370 QA D LT LPN+R EQE + L +D+ + ++ G Sbjct: 473 EELIWRQANFDHLTGLPNWRMFHDRLEQEIKKSRRVELPLAVVFLDLDHFKEVNDTMGHA 532 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 ++ L ++E++ + +L G E L+L + ++ + + S Sbjct: 533 TGDLLLKEAALRLSSCVRESDTVARLGGDEFALLLGELSDQDSIERVNECILNKFSAPFQ 592 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N + + + ++ LL + + + + Sbjct: 593 LGNELAYISVSIGVTIYPSDATEIEALLRNADQAMYAAKNSGRNRS-CYYTQAMQSVAQN 651 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L N + AL Q L QPI + ++ + G+++P F+P+ Q Sbjct: 652 RMSLSNDLHKALAQDQFRLVYQPIVELETGSIHKAEALIRWQHPNRGLVSPADFIPIAEQ 711 Query: 545 FNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQK---NIAGRIIRLFKRY 600 L + V + K + S+N P+ ++A K Sbjct: 712 SGLIIQIGDWVFRQAANQVKHWRGAYGKDIQISINKSPVQFKSDSNTHLA--WFEHLKEL 769 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 +S +EITE +++ + + G ++A+DDFGTGY++ LK+ D I Sbjct: 770 DLSGGCFAIEITESLLMDASDTIVSKLMAFGNIGMQVALDDFGTGYSSLSYLKKFDIDYI 829 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+++ ++ D + ++ +A + V+AE VET +Q+ LL G Y QGYL Sbjct: 830 KIDQSFVRNLAPDSSDLALCEAMIMMAHKLGIKVIAEGVETSEQRDLLRTAGCDYGQGYL 889 Query: 721 IGRPQPLAD 729 RP D Sbjct: 890 FSRPLSTED 898 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 105/576 (18%), Positives = 198/576 (34%), Gaps = 32/576 (5%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDF 238 Y + + + ++R A L +L+ ++ + Sbjct: 826 YAGRKARLVLAHDITERLKAEKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAWTE 885 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST-----LCLLNYNQNFLQGVETEYSLAF 293 ++GY + I + + + F Sbjct: 886 LSGYHLDELSTIADWTEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIWDF 945 Query: 294 ILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG- 349 A L ++ M + + L D LT LPN L EQ Sbjct: 946 SSAPLGKLADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKR 1005 Query: 350 --------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G ++ +++I L ++ + + + G E Sbjct: 1006 KQQQPNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEF 1065 Query: 402 LLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +++L M + ++T L+ Sbjct: 1066 VILLEDLTIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNA 1125 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---E 515 +S + ++ Q T+ + L +R AL++ + ++Y QPI + Sbjct: 1126 DIAMYRSKEAGRAR-YTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRN 1184 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---G 572 G++ ++ + + G+++P F+P+ + L VL + + Sbjct: 1185 LLGFEALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAEN 1244 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R SVNL L Q N+ RI + + + + LEITE +N E + Q+ Sbjct: 1245 LRVSVNLSGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKA 1304 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 +++IDDFGTGY++ L L D +KID FV + + IV +I LA + Sbjct: 1305 KKIQVSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQM 1364 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET+Q L +LG ++ QGY +P Sbjct: 1365 DVVAEGVETEQHLRQLQQLGCEFGQGYFFSKPLESE 1400 Score = 70.0 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 18/181 (9%), Positives = 45/181 (24%), Gaps = 13/181 (7%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 ++G+ + +TV L L + +LI +L L R I F ++ A E R Sbjct: 255 WYGEPENFWTVGRLFWLMSGLLITTILLMSLWRYISLRPFY--RLQQIEAALRASESRYR 312 Query: 216 TLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTW 267 + + + + N+ Sbjct: 313 GIVEDQSEFICRYRPGGTLTFVNQAYCRYFQKTPAAVLDNTFWDLIYSEDQPQVAQNIAS 372 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHL 324 ++ + + V++ ++ + R + + + Sbjct: 373 LTPENPMITHEHRVRLSSGEIRWNQWTNRVIMDEKRNIIEFQAVGRDITQLKQVEAALRQ 432 Query: 325 Q 325 Sbjct: 433 L 433 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 11/171 (6%), Positives = 30/171 (17%), Gaps = 15/171 (8%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 + + + +Q + + + E+R + ++ Sbjct: 439 QRVEQRTAELAAEIRERQEIETALIKSQAKYEQLVEKLSKSEERLQLALEGSGDTIWEWN 498 Query: 230 LCTPYEND------FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS-----TLCLLNYN 278 L T + I + A+ L Sbjct: 499 LGTGELYCDPNWIRRLGYDPREEAINIEWWRSKIDPETLSDHEAALENYLNGKTEYLALE 558 Query: 279 QNFLQGVETEYSLAFILAVLISFSVC----LLYMVRIYHRSEWLNRRWHLQ 325 + + +L R ++ Q Sbjct: 559 YKIQTLEGEWLWIGGRGKCIAYDQQRKPLKILGTHRDITETKQTQENLRQQ 609 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 12/149 (8%), Positives = 35/149 (23%), Gaps = 15/149 (10%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFF 248 H ++ +++ T+ + + L E + I G+ + Sbjct: 593 HRDITETKQTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGWSLENRQ 652 Query: 249 IIFTLGVGKLRYPFLN--LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 L + + L + S + L + A + + Sbjct: 653 KGDLLAEFEPESEYRQSVLNYIKSAQGKWR-DFKILVRDGRI--IDTSWANVKLSDGTSI 709 Query: 307 YMVRIYHRSEWLNRRWH-----LQALTDP 330 + + + + + D Sbjct: 710 AIGQDITERKRIEEILRESEEKYRLFFDA 738 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 110/550 (20%), Positives = 211/550 (38%), Gaps = 26/550 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLL----CTPYENDFIAGYLVPVFF----IIFTLG 254 +E + A + + +L + GY + + Sbjct: 24 SATAMTEQETMFRSTMEAAQVGIFVLQNQRFKYVNPFLVGMFGYSAEELLEQMGPLDLIL 83 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV-LISFSVCLLYMVRIYH 313 + + + + + NY L+ + + + + +I + V Sbjct: 84 PEQHAFVIEQMQLRAAGVLGHNYELTGLRKDGSTLPIMVLGSPSVIGGLPASVGTVLDIS 143 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + +R A D LT LPN R L + EQ ++ + L +D+ + ++ Sbjct: 144 AQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVND 203 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---N 422 G + + + R L +++ + L +L G E + + G T ++ + L Sbjct: 204 SLGHSVGDELLCEVARRLDSVVRRIDTLARLGGDEFIFAMPGFHTAAAVE-VARRLVEVF 262 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 SR L + + + L+ LL ++ A ++ Sbjct: 263 SRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRN-AFQFYSSEMN 321 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 T ++L+ + +R AL Q + +L+ QP+ N E G + ++ L + G++ PD+F+ Sbjct: 322 TTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFI 381 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + L VL + +VN+ P+ Q + Sbjct: 382 HVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALA 441 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + LE+TE +A+ +M + LH+ G +++DDFGTGY++ LKR Sbjct: 442 TSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVG 501 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV D+ T+ D I +I + ++ ++V+AE VE +Q ALL K+G QG Sbjct: 502 KLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQG 561 Query: 719 YLIGRPQPLA 728 Y RP Sbjct: 562 YYFSRPMSAD 571 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 104/593 (17%), Positives = 208/593 (35%), Gaps = 28/593 (4%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 +S+ + + L I S Q + + ++ Sbjct: 317 LVQPDGSLRYVEVSIVPIPWQQSKAYLALLTDITSLQQTQQRLKLLQEATENSPA---SI 373 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCL 274 +A + + + + GY F + +L ++ Sbjct: 374 LITSAEGI---IEYVNPAFELMTGYGADEVIGKNPRFLKSGLMSPSFYQDLWETITAGET 430 Query: 275 LNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + + ++ + + + + + QA D L Sbjct: 431 WRGELYNRRKTGELFWDRTSISPVKDLAGQIIHFVAVKEDITEQKRNRELLDHQANYDSL 490 Query: 332 TLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN Q S L +D + ++ G ++ I + L Sbjct: 491 TDLPNRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLGHSYGDCLLQEIAKRL 550 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAA 440 + + +L G E L++ + L+ + + S+ I L + Sbjct: 551 RYHLPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQPITIEAEELVITASIG 610 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + T + L+ + + ++ + ++ L +R AL+ Sbjct: 611 VACYPNDGVTPEVLMRNADTAMYSAKRNGGND-FQLFMPTMNAEAHARIQLETHLRHALE 669 Query: 501 QGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 Q L ++ QPI + + G + + + G + PD+F+P+ + L +V+E Sbjct: 670 QYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLIIPLGYRVIE 729 Query: 558 SLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + +A +VNL P L ++ +R++ P + LE+TE+ Sbjct: 730 QACQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHNFRPNYLKLEVTEQML 789 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N + ++ LH+ G +A+DDFGTGY+ L+R +K+D F++DI +T Sbjct: 790 LDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQSFLRDIPHSTES 849 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V++I +A + VAE VET +Q L +G +Y QGY RP P + Sbjct: 850 CALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPLPAVE 902 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 92/455 (20%), Positives = 182/455 (40%), Gaps = 17/455 (3%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---- 345 ++ ++ + R A D LT LPN R Sbjct: 160 AVLRNFRLMEDLRRHAAMLEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLA 219 Query: 346 ----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSE 400 + + L +D + ++ G + + ++ + L + E + + + G E Sbjct: 220 LAQRHKRPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDE 279 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++ LS + + + L + + + + L+ Sbjct: 280 FIINLSAISDVKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKN 339 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 ++ ++ + +++ L N +R AL++ + +L+ QP N Sbjct: 340 ADVAMYRAKEQGRNNC-QLFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHG 398 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-P 573 + + ++ G++ P +F+PL + L VL + + Sbjct: 399 QIACMEALVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTM 458 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 + +VNL P L Q +++ + R+ ++P +++E+TE +AE ++ +L + Sbjct: 459 QVAVNLSPRQLRQGDLSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRM 518 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G RI+IDDFGTGY++ LK+ +KID FV++I +N D I ++ +AK +L Sbjct: 519 GVRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLG 578 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET +Q +L L +Y+QG+L P P Sbjct: 579 VVAEGVETVEQMEVLRALNCRYMQGFLFSEPAPAE 613 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 118/605 (19%), Positives = 209/605 (34%), Gaps = 28/605 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 + + + L + + R+IV Sbjct: 141 SVRRRHRDNITEQHYVLPLIHRNGHRLSVELHSRLTEFRGERVIVGVGLDISARLETERT 200 Query: 207 SLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 T+ ++ +LL + I GY + Sbjct: 201 LQLA----ATVFENSSEGILLTDADGTLITVNPAFTRITGYTEEQALGRRSRMFRTDHVG 256 Query: 262 FL---NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSE 316 + +++ Y + L+ + + + R + Sbjct: 257 QATNMQMMQSLAEHGHWQGEMFDRHRDGRLYPVWLSLSAVYDEDRVSNYVGVFTDISRRK 316 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKSFCCLRIDNLEFMSRHYGLM 370 R A DPLT L N AL + E E + + +D + ++ +G Sbjct: 317 AAEDRLVFLASHDPLTRLLNRDALFRKLEDICLSGIEQSFAVLFIDLDRFKLINDSFGHA 376 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 + +R + L ++ N L + G E L+L + M N L S+ I Sbjct: 377 TGDNLLRIVAARLSFVVGSNALLARQGGDEFTLLLEDTGQRTAVIDMANRLLDELSQPIT 436 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N L + + + LL ++ + G + + Sbjct: 437 LENQELHITASIGIALAPEHGKDAATLLRHADTALYRAKDAGKN-TFAFFTHTLHGLSNQ 495 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L N +R AL + L L QP + + G + +L + G ++P F+PL + Sbjct: 496 RLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWHHPELGQVSPATFIPLAEE 555 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VLE+ + LA +VNL + + + ++ Sbjct: 556 TGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDPGLTHHLKAVLSDSGLA 615 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + + LE+TE +N +++ + +L + G R++IDDFGTGY++ +LKR D +KID Sbjct: 616 ARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDFGTGYSSLAQLKRFPLDTLKID 675 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV I + D I +I +AK SLSVVAE VET Q+ L + G + +QGY Sbjct: 676 RTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFLARCGSELIQGYFYSP 735 Query: 724 PQPLA 728 P Sbjct: 736 PLAAE 740 >UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZI3_COLP3 Length = 858 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 103/619 (16%), Positives = 214/619 (34%), Gaps = 33/619 (5%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 I L ++ +D ++ LS+ N++ + H Sbjct: 225 TINADHSLYSAYQQLISHNIRHLAVSDDNGAIIGTLSM------DNIMSDIELAYVEELH 278 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFI 249 + S A + + +++ ++ + GY Sbjct: 279 QIVQQRDIALRESKKHLLVAEKIIEASLDGIMITDEQGTIISVNPAFTRVTGYKEAEVLG 338 Query: 250 IF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-- 304 + + L + + + Y + + Sbjct: 339 LNSKILSSGRHTSDFYQQLWLCILEQGVWQGEIWNKRKNSEIYPQWLTIIEISEGVDNNK 398 Query: 305 -LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + +R A D LT LPN R + + + Sbjct: 399 VFAAIFSDISERKLAEKRIENLAFYDELTQLPNRRLFFDRVDMALAIAHRKNNKMALFFI 458 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ +YG + +RS + L +E + + ++ G E L+L+ + Sbjct: 459 DLDYFKEVNDNYGHRIGDLLLRSFAKRLTESSKEGDTVARIGGDEFTLLLTDMREVDHIC 518 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 N + + H L++ + + + L+ ++ Sbjct: 519 KACNRIVEKLRQPYHIEGHALNITTSIGIAVYPEDGTNEEELMKNADIAMYRAKDIGRN- 577 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYD 529 + ++ + ++ L+ + +R AL +L L Q + G + +L Sbjct: 578 SFQLFTPAMNAHSQERSLIQSHLRLALVHNELELNYQAQIHGVTGKVMGVEALLRWYNPI 637 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G ++P +F+P+ + A D VLE K R +VN+ L Q N Sbjct: 638 LGQVSPAQFIPMAEELGFIAEIDHWVLEHACKQRKLWLDQGLDCGRIAVNISALHFHQGN 697 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + + + + +EITE + + ++QL K G ++A+DDFGTG+++ Sbjct: 698 LVASVESVLAQSQLPAELLEVEITEGCFIKQMDKATSILKQLKKMGVKVALDDFGTGFSS 757 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L L D +KID F+ + N ++ I +I LA+ +L +VAE VET+ Q+ L Sbjct: 758 LSYLTSLPIDTLKIDASFIAKLPHNFRESQITSAIITLAQNLNLDIVAEGVETEAQKIFL 817 Query: 709 HKLGVQYLQGYLIGRPQPL 727 + G + +QGY +P Sbjct: 818 IERGCEIMQGYFYNKPVCA 836 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 113/638 (17%), Positives = 225/638 (35%), Gaps = 27/638 (4%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS--LF 173 L + LGL G++ + PL + T D ++ + Sbjct: 113 LADDQFDVMVLDLGLPDAQGLEAVRAARACTPNIPLVVLTGLDDGHLASLALEEGAQDYL 172 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW------LAALSVLL 227 I R + + + + + Sbjct: 173 LKGEINARGLRRALRYAIDRKAIEEKLFAEQESARVTLNSIADAVISADLSGNITFLNSV 232 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 T ++ + G + + + R + + N ++ + Sbjct: 233 AEKLTGWQQNEALGRPIADILKVVDEITREPRGSTVERPNQLHRSTKAPSNSILVRRDGS 292 Query: 288 EYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 E + A ++ + ++ + + + A D LT LPN R L+ Sbjct: 293 ELPIDESRAPILDRQGQIAGTVTVLHDVSVTRAMELKMAHLAQHDFLTDLPNRRVLDDRL 352 Query: 345 EQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 Q + + ID + ++ G M ++S+ L ++ ++ + + Sbjct: 353 RQAISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASDTVARQ 412 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++L+ T + + S L + + + + Sbjct: 413 GGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPNDADDAET 472 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L+ Q+ ++ + ++ L +++R AL++ + LL+ QP N Sbjct: 473 LIKHADIAMYQAKEKGRN-NYQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPKMN 531 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 G + ++ + G++ P F+ + L VL+ + + Sbjct: 532 LETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAG 591 Query: 571 K-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ + +K+ +I + + P+ + LE+TE AE ++ + Sbjct: 592 LNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHA 651 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G ++AIDDFGTGY++ L RL D +KID FV D+ T T +A IV +I + K+ Sbjct: 652 LKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKS 711 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +L+V+AE VETQ+Q ALL QGY RP + Sbjct: 712 LNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSV 749 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 109/630 (17%), Positives = 220/630 (34%), Gaps = 68/630 (10%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALS 224 + + N + I S A+ R + A + + Sbjct: 455 WMRITGRAIDPANPNDGSIWNYEDITSRKVAEDSLRESVMLQRAILNSAKLMILSTDSEG 514 Query: 225 VLLL------LLCTPYENDFIAGYLVPVFFIIFTLGVGK----------LRYPFLNLTWA 268 ++ + + + V FF+ + + L Sbjct: 515 RVISCNPATEQMLAYPSAELLGRTPVECFFLREEIQERRRALSSETGFDPASDIDVLLAR 574 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNR----- 320 V + F + ++ + ++ L L++ + Sbjct: 575 VRLGSVDQGQWTFQRKDGEKFIVELSISALHPEDKKAQGFLFVASDITERKRAEDALLRS 634 Query: 321 ---------------------------RWHLQALTDPLTLLPNFRALEQAP--------E 345 + A D LT L N L+Q + Sbjct: 635 RDELELRVKERTSELESEVLERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQ 694 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + + +D + ++ G + ++++ L ++ N+ + +L G E +++L Sbjct: 695 DDTKVAILFIDLDRFKTINDSLGHHIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIIL 754 Query: 406 SGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 E + + + I + L + + + T+ L+ Sbjct: 755 PLKANEALAGKLASKILDALRPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAM 814 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 Q+ A+ ++ + + +R A+D+ + ++ QP+ + Y Sbjct: 815 YQAKANGRN-TYCYFTAEMNAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSY 873 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVN 578 + ++ G++ P +F+ + + L VL L + + ++N Sbjct: 874 EALVRWRHPTKGLVGPAQFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALN 933 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P+ N+ I R+ + Y ++P + LEITE + E ++ ++ L GFR++ Sbjct: 934 LSPIQFNDPNLTEGICRILRDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLS 993 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D +KID F+ D+ N D IV +I LA + LSV+AE Sbjct: 994 IDDFGTGYSSLAYLKRFPVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEG 1053 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET++Q LL L + QGY + +P P Sbjct: 1054 VETKEQYDLLSALNCNFAQGYYMAKPMPAE 1083 Score = 62.3 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 15/194 (7%), Positives = 42/194 (21%), Gaps = 17/194 (8%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + P D D ++ ++ I A+ Sbjct: 54 VAGPILSAGKPFHQEIQLRHHDGHTFWADAVAYLFDPRHPAEGTIWIINDISERKQAERN 113 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIFTLGV 255 + ++ A++ ++ +L + I GY + T + Sbjct: 114 LHETVQELQ-------SIFNNASVGIVFTNRRTVLRCNRRFEEIVGYASDELHGMPTANL 166 Query: 256 GKLRYPFLNLTWA----VSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMV 309 L +S + + F + + S ++++ Sbjct: 167 YASAESHEELGRQSSPLLSAGKAFSATKQFRRKDGHLIWCQVFAKAIDPNDPSRGIVWIA 226 Query: 310 RIYHRSEWLNRRWH 323 + Sbjct: 227 ADVTEAVSTREALE 240 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 14/153 (9%), Positives = 38/153 (24%), Gaps = 11/153 (7%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYL 243 R IV + L +++ +++ ++ + G+ Sbjct: 220 RGIVWIAADVTEAVSTREALEKSSREMEALMANSSVGIVVTHDRKIVRYNQRFGKLFGFP 279 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTW----AVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + T G+ + L A+ + ++ + I V Sbjct: 280 GENGIGMDTAGLYRSAEEHTELNRRAAPALFQAKPFQTELYMRRQDGSDIWVNLIGYVAD 339 Query: 300 --SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 S+ + ++ + A D Sbjct: 340 PTDPSMGVFWIAEDRTAFKQAEEELKK-AYFDQ 371 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 9/194 (4%), Positives = 36/194 (18%), Gaps = 17/194 (8%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 F P + + D V+L+ +M +++ + A+ Sbjct: 304 RAAPALFQAKPFQTELYMRRQDGSDIWVNLIGYVADPTDPSMGVFWIAEDRTAFKQAEEE 363 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT----PYENDFIAGYLVPVFF----IIF 251 ++ + + + + + GY + Sbjct: 364 LKKAYFD-------QRLIFDNCVAGIAFVRNRVFQQCNRRFEELYGYGPGELTGKPTRVT 416 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMV 309 + + + + + + ++ Sbjct: 417 YFSDKAHAEIGTTAYEMLGRGETFVSEVVHRRQNGDPIWMRITGRAIDPANPNDGSIWNY 476 Query: 310 RIYHRSEWLNRRWH 323 + Sbjct: 477 EDITSRKVAEDSLR 490 Score = 44.6 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 9/115 (7%), Positives = 26/115 (22%), Gaps = 9/115 (7%) Query: 218 SWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA---VS 270 A + +L +L + I G+ + A +S Sbjct: 1 MNNAPVGILYTKNGEILRYNAKFSEIFGFDTEIIGKSARQLCPSDAAYEALGEVAGPILS 60 Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSEWLNRRWH 323 + + + + + ++++ + R H Sbjct: 61 AGKPFHQEIQLRHHDGHTFWADAVAYLFDPRHPAEGTIWIINDISERKQAERNLH 115 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 92/572 (16%), Positives = 198/572 (34%), Gaps = 29/572 (5%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 ++ R I A+ + ++ + + + I Sbjct: 264 VDCLLFVMRDITERRKAEKQLKILSQACEQSPA---SIVITDVQGN---ITYVNPKFEEI 317 Query: 240 AGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 +GY K + + + +++ + + + Y ++ Sbjct: 318 SGYKSAEVLGRNPRILKSGNKTQEDYELMWKTLASGRNWHGEFHNRRKNGELYWERASIS 377 Query: 297 VLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + + + + QA D LT LPN + Sbjct: 378 PISNQQGIVTHYVAVKEDITKEKQQAEALFHQAHYDHLTGLPNRILAKDRLQQAIESALR 437 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 Q+ L +DN + ++ G + + L +++ + + +L G E L++L Sbjct: 438 QKHIFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSERLQRALRQTDTVARLGGDEFLIIL 497 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 +L + L + ++ + F + LL Sbjct: 498 DQVSHSRKLMAIAQRLLRVMRQPVNLQGLEFFVHGSIGITVFPDDGFHADVLLRNADTAM 557 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 + + ++ +++ + + +R L + + + QPI + + G Sbjct: 558 YAAKLAGRNM-FRFFTPHMNQAAQQRMAIESELRQGLSRQEFQILYQPIVSLESGQIVGA 616 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSV 577 + ++ G + PD+F+P+ + L +L+++ A SV Sbjct: 617 EALMRWHNRLLGTVPPDQFIPIAEEVGLIVELGEWLLDNVCCQAAHWHSALGEQTFWVSV 676 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ P L + +RY + P+ + LEITE + N+ L + + Sbjct: 677 NVSPRQLKDSYFVAILQGFLQRYQVRPEWLELEITENLILEENGDLLKNLSDLEEENIAL 736 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ L++ + +KID FV+ + + +VR+I +A L V+AE Sbjct: 737 SLDDFGTGYSSLNYLRKFNFNSLKIDRSFVELLPHDNNTVGLVRAIIAMAHHLELKVIAE 796 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +ET +Q L G Y QGYL + + Sbjct: 797 GIETPEQWNFLRLQGCDYGQGYLFSPAIAVEE 828 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/215 (9%), Positives = 46/215 (21%), Gaps = 15/215 (6%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 RL I I L F ++++ L + Sbjct: 71 RLKAAPATAEIPIIFLSALTDQKSIVKGLELGAVDYIHKPFQQEEIITRLQLQLKLHQTN 130 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYEND 237 L + R A + E + + + ++ Sbjct: 131 QALLQKNQQLEEQIEKTARTQAALMQSEINFAVAFNQSPDPIFIYGRNSGCIMDVNQPFC 190 Query: 238 FIAGYLVPVFFIIFT-----LGVGKLRYPFLN---LTWAVSTLCLLNYNQNFLQGVETEY 289 G + + R FL L + N + Sbjct: 191 QFFGLTKQELVGVSRQQFYFWVDEQQRQSFLRDLLLWQKDGLVKFENREIEVYDQEKQVR 250 Query: 290 SLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWH 323 ++ + + CLL+++R ++ Sbjct: 251 TMLLSGEPMEFNRVDCLLFVMRDITERRKAEKQLK 285 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 125/746 (16%), Positives = 255/746 (34%), Gaps = 50/746 (6%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMF 72 I +++ + IQ + S L W L V+ S+L + Sbjct: 77 ITSISLAAILAYIQ--------RTVVPSSELLVWCLLMVLASLLRAALVYSPQTLRLDDA 128 Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 + V V + +L + + + Sbjct: 129 AAVQARLQKFRIGVVVAG-----AVWGSAGLLLFPAHHPQYVMFLIFTLAGMTAGGVISF 183 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + ++ GD + +++ + + + I Sbjct: 184 SADLVSAVAFSVLLSLPVAIRLFVTGDHLSE---AMGVAVLLYLGFMIASIRRINQNICE 240 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVF 247 +I E+R L + + L++ + V Sbjct: 241 NIILRIEAAAREGKVRESEERYRLLLSHLPVGIFHYNTDLVITYCNDRLAELLHNSVEHV 300 Query: 248 FIIFTLGVGK--LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + V + + +Y + + + Sbjct: 301 IGLDMKLVKDQAILPSLRKALEGERSNFEGHYLATYSDAEG---WAYITCTPFHDHNGQI 357 Query: 306 ---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + +V+ + + + A DPLT LPN R L + + Sbjct: 358 AGGIAIVQDITEHKAAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLF 417 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----E 409 + +DN + ++ G M +R + + L ++E + + +L G E +++L E Sbjct: 418 IDLDNFKALNDTLGHDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLE 477 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + + F G++ + LL + Q+ Sbjct: 478 AAAQTEAVGEKILAMLGLPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAK 537 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILA 524 + ++ + T +V L + ALD+ L+ Q + G + ++ Sbjct: 538 QAGRN-TVRFFDQQMQDAVTARVALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALIR 596 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPL 582 + + G++ PD+F+ + + +L V+++ L T +VN+ Sbjct: 597 WMHPERGLVPPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSAT 656 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + ++ +R+ I P+ + LE+TE N E ++ + L + G + ++DDF Sbjct: 657 QFHQLDFVFQVRATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDF 716 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ + LKRL D IKID FV+DI +++ D IV +I +A+ L V+AE VET+ Sbjct: 717 GTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETE 776 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q+ L G + QGYL G+P P+ Sbjct: 777 EQRQFLQDNGCTHFQGYLFGKPVPVE 802 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 121/624 (19%), Positives = 240/624 (38%), Gaps = 31/624 (4%) Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 I + + +++ + L F+ L LF L ++ Sbjct: 306 ATIPLLLGGEVIGLLNVARTEGERWAEESLRALQSLGHQFSVALGRARLFDSLESLVEQR 365 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--------LLCTPYENDFIAGYLVP 245 A + + + K + ++++ ++ + I+GY + Sbjct: 366 TSALKAEMAEKERAQEQLKLRNRAVDASVNAIIIADKSEPDNPIVYANPAFERISGYNLE 425 Query: 246 VF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---I 299 +F LG + N+ A+ + + T + +A + Sbjct: 426 DVTGRNFLFLLGNETSQLGVANIKRALKSNTEGYALLKNYRKDGTLFWSELKVAPVTDAK 485 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKS 351 + ++ S + + D LT LPN L +Q G + Sbjct: 486 GDVTHFVAILNDVTESIQYQAQLEYKTKYDNLTGLPNRNLLNDRIQQAIAYAARRNKGFA 545 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 +DN ++++ G + + +L ++E + L +L G E ++++ E + Sbjct: 546 LAVFDLDNFKYINDSMGHETGDQLLTEVAESLRSCLREGDTLARLGGDEFVILMHKEECD 605 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 L M+N + S+ + + + +F + E LL ++ Sbjct: 606 RPLGLMLNRIQQLVSQPRRLKDKEILVTPSIGVCQFPEDGEDASTLLKNADTAMYKAKER 665 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + S + ++ K+V + +R ++ G+L LY QP + G + ++ Sbjct: 666 GRNR-ICSYTQEMNESIQKRVQMEQDLRRGIENGELELYYQPQLDPHGGGAVGLEALVRW 724 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTL 584 K D ++ P +F+P+ + L D VL + L K+ SVNL P Sbjct: 725 RKGDR-MVPPLEFIPIAEETGLITEVDAWVLRAACLQLKMWRDQKQQMVPVSVNLSPRQF 783 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + ++ + +I P + +E+TE NAE ++ + QL G ++++DDFGT Sbjct: 784 QDAYCVELVRKVLQESNIEPGCLKIEVTESMVMHNAEEALRTMTQLKAMGVQLSMDDFGT 843 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK D +KID FV+++ + +A I+R+I L K + +VAE VET +Q Sbjct: 844 GYSSLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQ 903 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 + L + G +QGY P P+A Sbjct: 904 YSFLVRAGCDLIQGYFYSPPLPVA 927 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 104/580 (17%), Positives = 207/580 (35%), Gaps = 27/580 (4%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLC 231 + R + ++ + I E R L + + + + Sbjct: 531 SFTSSRQLEKTARQLAKEKHQRLRVQELIDNIDAAESRYQLLIENSLVGIFVYQHHRYTY 590 Query: 232 TPYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNL----TWAVSTLCLLNYNQNFLQGV 285 I GY V F++ L Y L+ Sbjct: 591 VNPRFAEIFGYTPEEIVDSAPQPQLVHPDDQLFVDANNLKILGGVNANHLRYEFVGLRKT 650 Query: 286 ETEYSLAFIL-AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + ++ + L+ + + + A DPLT L N Sbjct: 651 GQPIDVEILIGRGISEGQPALIGSLLDITERKEAEKTIEHLAFHDPLTGLANRLLFMDRI 710 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + L +D + ++ G ++ + + L ++E + + + Sbjct: 711 EQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTVSRF 770 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E ++LSGP E ++ + + + N+ + M + + Sbjct: 771 GGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGREAIT 830 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 L+ ++ ++ + +++ + +++R ++ +L ++ QP Sbjct: 831 LVKNADTALYRAKDLGRN-NFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQVG 889 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + ++ G ++ P F+PL + L VL++ L T Sbjct: 890 LQSGRITGLEGLVRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAG 949 Query: 571 K-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 R +N+ L + + A ++++ K + P + LEITE N + + + Sbjct: 950 FAPMRLGINVSAHQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETLRR 1009 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G I+IDDFGTG+++ LK L AD +KID FV+++ +A I R I ++A Sbjct: 1010 LRAVGITISIDDFGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHG 1069 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L V+AE VE Q Q L + G +QG+L+ RP D Sbjct: 1070 LNLKVIAEGVENQAQLDFLREAGCDEIQGFLVSRPLAAED 1109 >UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B330_9CHRO Length = 1188 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 106/590 (17%), Positives = 205/590 (34%), Gaps = 27/590 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 +V + + + R I + + W + + Sbjct: 589 LIVAEMRVGLIIWEQQKAHLISLRDITERKQIEKALSESEQRLESILNSIEDVVWSTS-A 647 Query: 225 VLLLLLCTPYENDFIAGYLVPVFF----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 L L+ + + G + + F L + A+ Y Sbjct: 648 TTLNLIYLNPATERVYGCSIEQLLAEGNLWFNLVHPDDQALIDAHFKALEDTGHSEYEYR 707 Query: 281 FLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 ++ T L + + + + + A DPLT LPN Sbjct: 708 IVRPDGTVRWLYSRSRTIYDPTGKPIRFEGIDSDITERKSFTEQLQYNAYHDPLTSLPNR 767 Query: 338 RALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L + E+ + L +D+ + ++ G ++ + +I + L + Sbjct: 768 IFLLEKLEEALKKNQNRENIFFAVLFLDLDDFKVVNDSLGHIVGDQLLIAIAQRLKTSLS 827 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFD 445 L + G E ++L ++ + ++ N + + D Sbjct: 828 VPHTLARFGGDEFTILLEEIQSTDEPLKAAQKIHNDLTQPYDLNGQQVFISTSIGIALSD 887 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + Q +L Q+ ++ + + K++ L +R A++ + L Sbjct: 888 PSYIHPQEILRDADTAMYQAKRWGKG-GYAVFDQQMHLRAVKRLHLEIELRQAIELKEFL 946 Query: 506 LYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QPI + G++ ++ G+++P +F+P+ + L + + + Sbjct: 947 LYYQPIVSLSTGYLTGFEALIRWQHPKKGLISPVEFIPIAEETGLIVPMGKWITQQACRQ 1006 Query: 563 LATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 L + SVNL L ++ I + + I P ++ LEITE N Sbjct: 1007 LKLWQEQYNLKNPLQISVNLSSKQLRNSHLIEEIDEILAQTGIDPSSLKLEITESMLMEN 1066 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + +M + +L K + +DDFGTGY++ L R +KID FV + +A I Sbjct: 1067 VDIAMNILIELRKRNIELCLDDFGTGYSSLSYLHRFPVTTVKIDRSFVMQMQPGNSNAEI 1126 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V +I LA + ++V AE VETQ Q L L + QGY +P P + Sbjct: 1127 VHAIITLAHSLEMTVTAEGVETQLQLQQLQWLECEQAQGYFFSKPLPPKE 1176 Score = 59.6 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 13/168 (7%), Positives = 30/168 (17%), Gaps = 25/168 (14%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + P A+I R L C + GY Sbjct: 134 DVTEPKQAEIQRERFFTL------SLDLLCIAGFDG---YFKCLNPAWETTLGYSTEELI 184 Query: 249 I---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 I + + + ++ + T L + + Sbjct: 185 SQPFIELIHPDEREAALTEIERLGRGQLTYHFENRYRTREGTYRWLTLTAVPYVEE-GLI 243 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFC 353 + + + T L+ + + Sbjct: 244 YAVAHDITKRKQTEAEIQQ-------T----RNFLQTMIDH-LPLAVF 279 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 8/143 (5%), Positives = 29/143 (20%), Gaps = 12/143 (8%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF 247 +R E++ + + + + + L+ + G+ Sbjct: 377 ISEDITERKRAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAFSQMMGFTEAEL 436 Query: 248 FIIFTLGVGKLRY----PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF-- 301 + L+ + + +L + ++ Sbjct: 437 LKRTCGDLTYPDDLKNEIPLHQKLLAGEIAYYRLEKRYLTKKGQVLYGMLHVGLIRDEQD 496 Query: 302 -SVCLLYMVRIYHRSEWLNRRWH 323 + L+ V Sbjct: 497 KPLNLVGQVVDISEKTQAEIALR 519 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 6/133 (4%), Positives = 24/133 (18%), Gaps = 21/133 (15%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFII 250 + E R + + ++++ + + + G Sbjct: 507 DISEKTQAEIALRESEDRLSRIITTISDGLIVVNNQGNIKFINPAGEKLFGRSQEELLEQ 566 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMV 309 + + ++I L + Sbjct: 567 HFGVPFVDGK---------------TTEIFIRHANQQLIVAEMRVGLIIWEQQKAHLISL 611 Query: 310 RIYHRSEWLNRRW 322 R + + + Sbjct: 612 RDITERKQIEKAL 624 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 107/575 (18%), Positives = 205/575 (35%), Gaps = 34/575 (5%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 F L+R I + +E T + +L Sbjct: 310 SEHHFIVLSRDITERKRHERELHIAATAFDSQEGMLITDAEH-------RILRVNNAFTR 362 Query: 239 IAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + GY F + + ++S + Y + Sbjct: 363 VTGYEAEEAIGNTPAFLQSGKHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTI 422 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--- 349 + + + + H A D LT LPN R+L++ + Sbjct: 423 TAVQTSAGEITNYVGAFTDITQRKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCR 482 Query: 350 -----KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +DN + ++ G + + L ++ + + +L G E +++ Sbjct: 483 HTRQLGAVFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVI 542 Query: 405 LSGPETEG-----RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 L + +++ +V + + F + ++ Sbjct: 543 LENLGVDESNVLAQVKDIVAKVILTIQAPLTIGTQAYHPTCSIGIALFSEKDFS-DEVMK 601 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKE 515 + Q+ + + + + +R AL L L+ QP + Sbjct: 602 RSDMAMYQAKSSGKN-TYRFFDPVAEEALCSLARMDADLRFALSNQQLELHYQPQYRCQT 660 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGP 573 G + +L D G+++P +F+PL L V+ K L + Sbjct: 661 LIGAEALLRWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAEL 720 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ Q N + +L Y +S + + LE+TE + E ++ ++ L + Sbjct: 721 FIAVNVSARQFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSY 780 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R A+DDFGTGY++ LKRL D IKID F++D+ + D+ IV++I + + L+ Sbjct: 781 GIRFALDDFGTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLN 840 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VET +Q A L +L +QG+L+GRP + Sbjct: 841 VLAEGVETDEQLAFLTELDCLDIQGFLLGRPSSID 875 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 98/585 (16%), Positives = 205/585 (35%), Gaps = 23/585 (3%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + S+ R + F + S E + + + Sbjct: 810 PVILEMQSSILRNESGAIEGILATCRDVTQRRFIE---HEARTASEVFENSSEAIMMTTS 866 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 ++ + G V + ++ A+ +++ Sbjct: 867 TGLISRVNRAFTHLTGFDGQHVIGVNPKQFIAKDVSHQTMQDIRDALLVDGYWQGELDYI 926 Query: 283 QGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 ++ + L + + + + R A DPLT LPN Sbjct: 927 NRKGEKHPSWTGVTALKDEMGQIQSHIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQ 986 Query: 340 LEQAPEQ-----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + +A ++ E+ + + +D + ++ G ++ + L + + Sbjct: 987 MHEALDRLMAKEESQLALLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLVS 1046 Query: 395 QLPGSELLLVLSGPETEGRLQH----MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGN 447 ++ G E ++++ + + + + + L + + N Sbjct: 1047 RIGGDEFTVIMATLPETEQAIQTIIDVSERILHQMMQPFFIEDRQLYLSASVGIALYPEN 1106 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL + A E ++ + +++ L N + AL + + L Sbjct: 1107 ALSGTDLLRNADTAMYHAKAMGKN-NFQFYAEEMNEKAMERLELENNLHLALQRDEFELT 1165 Query: 508 AQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 Q + + G + +L + D G++ PDKF+P+I + L VL + + Sbjct: 1166 FQAQWDIKHNCICGVETLLRWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIM 1225 Query: 565 THPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VNL + RI R+ + P+ + LE+TE + + + Sbjct: 1226 DWQEAGYVIPKLAVNLSARQFKDAQMLDRICRIVDETGVDPELIELELTESILMDDIDRT 1285 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + + K GF ++IDDFGTGY++ LK+ +KID F++++ N D I R+I Sbjct: 1286 LAVLNEARKMGFGLSIDDFGTGYSSLSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTI 1345 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A L V+AE VE + Q+ L +G +QGY+ P P Sbjct: 1346 VAMANNLGLGVIAEGVENESQRQFLKTIGCYQVQGYMYSHPVPAD 1390 Score = 44.6 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 10/139 (7%), Positives = 24/139 (17%), Gaps = 16/139 (11%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCT------PYENDFIAGYLVPVFFIIFTLGV 255 + E+ + +V + L + GY I Sbjct: 577 KAELALKDSEQFWSNVIQTLPDTVYVNDLFAKQTRFSSRHIGELLGYSSEELEEIEHWRQ 636 Query: 256 GKLRYPFL------NLTWAVSTLCLLNYNQNFLQGVETEYSLAFI----LAVLISFSVCL 305 + + + + F + + Sbjct: 637 LIHPDDVSKSDAAISQLKTMRPGEVKETTARLKHKNGNWRVIRFRDCIFSSETQVPAQYY 696 Query: 306 LYMVRIYHRSEWLNRRWHL 324 + M R E + Sbjct: 697 VGMARDITEEEDAKIQLSF 715 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 121/659 (18%), Positives = 233/659 (35%), Gaps = 30/659 (4%) Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 + R F + L+ +G + + + ++ G Sbjct: 44 IDMGAAVGNTDAHPSDNPEPQEQKNRNFRVTLIILLGKYLWIAGILASVVMSEAVTAAMG 103 Query: 159 DADAIFTVVDLLS--LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 D L+ + A+ + ++ + +M Q + E+R T Sbjct: 104 LLFKGEVTYDYLATGMVAALFVSAIMVTAIMKMEELERRRQEEVAK-NRALRASERRYRT 162 Query: 217 LSWLAALSVLLLL------LCTPYENDFIAGYLVPVFFIIFT----LGVGKLRYPFLNLT 266 L +A+ ++L+ + + + + G +L Sbjct: 163 LIEVASDAILVTDSETGTLVDCNRQAETLLGMSRNEIIGRHLCNLQQTGNDADGAETDLL 222 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQ 325 + + ++ T + + + R + R Sbjct: 223 GHMLRGKTGTIELSLVRADGTTVPVEVSSSTFEMDGRRYVHGAFRDITQRREAEDRIKHL 282 Query: 326 ALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN L EQ + + +DN + ++ G + + Sbjct: 283 AHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFIDLDNFKRINDTLGHRIGDALLE 342 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLD 434 + L + ++ + +L G E ++V++G M + R + L Sbjct: 343 QVAARLTENVPGSQVVGRLGGDEFIVVITGNRVSTTSAAMAERILESLCRPYTVEDYQLH 402 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 G + + + + L+ + + + + ++ +++ + N Sbjct: 403 SGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGRN-TFEFFSQAINRGVRERLDIENG 461 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL G L+ QP + + +L G++ PD+F+P+ + L Sbjct: 462 LRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPLLGVIAPDRFIPIAEETKLILPL 521 Query: 552 DLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 L V++ L D G R +VN+ L ++ + + +R+ +S + LE Sbjct: 522 GLWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDESFFEALGSIVERHGLSGSDIELE 581 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE N ++ L +G ++IDDFGTGY++ RLK L +KID FV DI Sbjct: 582 ITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYSSLGRLKLLPIQSLKIDRSFVHDI 641 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ +A I I L + L ++AE VET Q+ LL G +QG+LI +P P D Sbjct: 642 ETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNLLQNSGCDAIQGFLIAKPLPADD 700 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 97/553 (17%), Positives = 196/553 (35%), Gaps = 27/553 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLG 254 L + + + + ++L+ +L + GY F Sbjct: 445 AQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLTGYTSEEAVGRDPSFLSA 504 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRI 311 + + + ++ + Y ++V+ + Sbjct: 505 GRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIYPKWMSISVIRGEDGMIRYHVAHFTD 564 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 R H A D LT L N +L+ + + + +D + + Sbjct: 565 VSSERAAEERLHHMAHHDVLTGLLNRLSLKGRLDQALAAARRDGSRVAVLFVDLDRFKVI 624 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + G + + + L +++++ + ++ G E +++LSG E + + L Sbjct: 625 NDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGGDEFVIMLSGVEHTSAVAMVAEKLVF 684 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + L + + E L+ + + Sbjct: 685 SVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGDILMKNADAAMYHAKMAGRN-NFQFFDAK 743 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDK 537 ++ +++ + +R AL + LY QP+ + + ++ + G++ P K Sbjct: 744 MNEAALERLNTEHALRRALANQEFCLYYQPVIDLASNRVASLEALIRWNHPEKGLLLPGK 803 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 F+ + + L VL + + LA G + VN+ + + N+ + Sbjct: 804 FIGIAEETGLIQPLGEWVLWAACRQLADFAAAGISGIKMGVNISAIQMRNGNLPLLARGV 863 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + Y I P+ +I EITE A ++ ++ L+ G +AIDDFGTGY++ L+ Sbjct: 864 IEAYDIDPRNLIFEITESVAMEQPTETVRILDLLNAMGVSVAIDDFGTGYSSLSYLRMFP 923 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 + +K+D FV+ I +I + LA + L VVAE VETQ Q L G + Sbjct: 924 INHLKLDRSFVEQIGEEIDGCVICDATIGLAHSLELKVVAEGVETQAQLDYLRSRGCDMV 983 Query: 717 QGYLIGRPQPLAD 729 QG+L RP P + Sbjct: 984 QGFLFSRPVPADE 996 Score = 42.3 bits (99), Expect = 0.078, Method: Composition-based stats. Identities = 22/200 (11%), Positives = 50/200 (25%), Gaps = 17/200 (8%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + G ++A + L+ +F L ++V + +Q + Sbjct: 260 IYGYRALERYPFYAAAALSEAEVMATLRQRVIFVALLGCSMFVCLIAVVVGLYRSQRREQ 319 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLL---------CTPYENDFI---AGYLVPVFFI 249 L KE+R +A L + L +F GY F Sbjct: 320 LVSQQLLLKEERLTAAQRIAQLGSWEIHLPSMHVTCSDELYRIFEFTKRETGYQYQDFLA 379 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 + L ++++ + L + ++ Sbjct: 380 KIHPEDRSVVD--KTLHESIASRQPASLKHRLLMPDGRVKYVLESCETEYGRDGTPLRVI 437 Query: 307 YMVRIYHRSEWLNRRWHLQA 326 + + + + L A Sbjct: 438 GTSQEVTAQQEMLAQMQLLA 457 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 107/563 (19%), Positives = 213/563 (37%), Gaps = 25/563 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVP 245 I S ++ + E + +L + + V ++ +L + GY Sbjct: 365 IYSIAKDITTKKQAENALIEAESKYRSLVEKSIVGVYIIQKNIILYANPYLIDMLGYKEA 424 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVS--TLCLLNYNQNFLQGVETEYSLAF-ILAVLISFS 302 + + V Y + + + + L + ++ S Sbjct: 425 IIGMSIWDIVYPDDYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIMYQGS 484 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCC 354 ++ + + A D LT LPN R E+ E + Sbjct: 485 PAVIGTILDVTERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMY 544 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D ++++ G + + + + L ++E + ++ G E ++L Sbjct: 545 LDMDRFKYINDSLGHAVGDQLLIAFSKRLQEQIRETDFAARMGGDEFTVILPHIRDNNSA 604 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + L + + + + L+ ++ Sbjct: 605 IEVARRIIERTREPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKN 664 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ QT K L +R A+ + +L +Y QP N E G + ++ Sbjct: 665 -GYQIFTSSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWNHP 723 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 + G+++P++F+P+ + L V ++ + S+N+ L K Sbjct: 724 EWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLSK 783 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I ++ + P + +EITE NAE+ M+ ++ L+K G I++DDFGTGY+ Sbjct: 784 DFMDAIQQILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTGYS 843 Query: 648 NYERLKRLQ--ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 + LKR + +I+KID F+ D+ + D I+ +I LA+ ++SVVAE VET +Q Sbjct: 844 SLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQL 903 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 +L L +QGYL RP Sbjct: 904 HILKLLKCDLVQGYLFSRPVQAE 926 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 12/130 (9%), Positives = 28/130 (21%), Gaps = 9/130 (6%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIF--TLG 254 R+ ++R +L ++ L + I GY L Sbjct: 253 RNKQLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELLYSNYSHLV 312 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIY 312 R + +Y L + + + V + + + Sbjct: 313 AEYERDRARFYFDQALQGTVQSYELVCLHKQGHLVYMKLTKLPITVDNRIVGIYSIAKDI 372 Query: 313 HRSEWLNRRW 322 + Sbjct: 373 TTKKQAENAL 382 Score = 46.1 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 12/136 (8%), Positives = 35/136 (25%), Gaps = 9/136 (6%) Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTL 253 +D++ E+R TL + ++ +L + GY Sbjct: 128 AIAKDLSDIKLMEQRYITLLKNMFSAAFIIDLQGNILDVNDAAVKLTGYNKQEHVHFSQF 187 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRI 311 + + L++ + L + L+ + ++ + Sbjct: 188 INPEDLEQAMAYNQRALEGETLSFQISILHKNGHNVDVMTTLSPIYMHDQITGIIGISND 247 Query: 312 YHRSEWLNR--RWHLQ 325 + + + Q Sbjct: 248 ISDETRNKQLFQINKQ 263 Score = 42.3 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 30/134 (22%), Gaps = 9/134 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVF--FI 249 +R + E T+ + LL + GY + F Sbjct: 9 LKRNKRQEDIPILSEWFNTTMFDFRSDIFLLFDHNGRLIEANQAFTDTLGYSLEEFKHLT 68 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV--LISFSVCLLY 307 +L G R + + + L L L Sbjct: 69 YGSLLPGNQRQRAKEHFQKLLHGEIQIFEIRVLHKTGQFIDLTVTAFPRKLNDAIDGFYA 128 Query: 308 MVRIYHRSEWLNRR 321 + + + + +R Sbjct: 129 IAKDLSDIKLMEQR 142 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 114/578 (19%), Positives = 217/578 (37%), Gaps = 38/578 (6%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----T 232 + R I H Q + T+ A VL+ + Sbjct: 659 TGVDCMLTIARDITERHLMQEKLQLAA-----------TVFENTAEGVLITDIDQRISAV 707 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 I GY +L + ++ + Y Sbjct: 708 NRAFSEITGYSEIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELY 767 Query: 290 SLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE- 345 ++ + + + + + + QA DPLT LPN E + Sbjct: 768 PSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQG 827 Query: 346 -------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + L +D + ++ G + ++ I + L +++ + + +L G Sbjct: 828 VLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGG 887 Query: 399 SELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +++L G + N L + + + + L+ Sbjct: 888 DEFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLI 947 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE 515 +S A +++ ++ Q ++++ L + +R A+++ ++ L QP + + Sbjct: 948 RNADAAMYRSKAKGRNR-VEAYTRDLTAQASERIALEHELRRAVERNEMSLCFQPKLSLK 1006 Query: 516 ---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 G + ++ G + P+ F+ L + + VLE + + + Sbjct: 1007 TQSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQAWKQHYQP 1066 Query: 573 P-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 S+NL L ++A RI +L K + + + LEITE S AE ++ + QL Sbjct: 1067 FGPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLK 1126 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 K G ++AIDDFGTGY++ LKRL DI+KID F++ + + DA I R+I L ++ Sbjct: 1127 KLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQ 1186 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+++AE VE Q QQ L G + +QGY++ P P + Sbjct: 1187 LTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEE 1224 Score = 61.9 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 11/171 (6%), Positives = 37/171 (21%), Gaps = 11/171 (6%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA- 222 F L+ VL+ + + R+ E L + Sbjct: 263 FWSDLLVYGLPTVLLLMAVLAVVIRINRRLSSEISRRIALEQELRSSEYHYRGLVESLSA 322 Query: 223 -----LSVLLLLLCTPYENDFIAGYLV-PVFFIIFTLGVGKLRYPFLNLT---WAVSTLC 273 + + + GY + F + + Sbjct: 323 IAWEADANDFTYSYVSPHAEDLLGYPLSDWLRPGFWRSILHPEDALWAQAYCDSETAAGR 382 Query: 274 LLNYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWH 323 + + ++ + I++++ + ++ ++ Sbjct: 383 DHSLDYRVIRADGQPLWVRNIVSMIEHGHQPVMRGLMIDISETKRTEDALR 433 Score = 61.1 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 26/231 (11%), Positives = 55/231 (23%), Gaps = 24/231 (10%) Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 Q+G + L+ + P+ ++ + + S Sbjct: 470 QIGLPPDQVIGRTATDLDLWGVEGSGPLLLERLHQGGIRNLEMSFRRSN-------GQLF 522 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 L S T L R I + E++ + +L Sbjct: 523 TGLTSAETFELDGTPALVVAVRDIS-------QLKETQQQLQTSEEKFAKAFHASPDGLL 575 Query: 227 LLL------LCTPYENDFIAGYLV--PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-Y 277 L L + GY + + LG+ L ++ + + Sbjct: 576 LSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIWVDLNERKRLVDQLNRDGFVRDF 635 Query: 278 NQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + + L + C+L + R + + L A Sbjct: 636 TCHIRRSDGQIRLCELSARPLPITGVDCMLTIARDITERHLMQEKLQLAAT 686 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 104/576 (18%), Positives = 202/576 (35%), Gaps = 38/576 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIA---- 240 V+ + L + + T+ A ++ ++ Sbjct: 202 AVALVQDITEHKNADQAVLKEREFLQTVIDGIADPIMAISTDYHVILANRAARESHPEHA 261 Query: 241 ---GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 G + + L + T L+ + + + Sbjct: 262 LQPGPTLCYQLSHGSDTPCSDTNQKCPLCQVLKTGKEAREIHEHLRAGHEKRTYEIKASP 321 Query: 298 LISF---SVCLLYMVRIYHRSEWLNRRW----HLQ---ALTDPLTLLPNFRALEQAPE-- 345 L + ++ R D LT LPN E Sbjct: 322 LYNEDHSIRGIIETSRDLTDILNSEAELNEKTQHLQFVTTHDQLTHLPNKELFFDRLERA 381 Query: 346 ----QEAGK--SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + + +D + ++ G + ++ + + L +++ + L ++ G Sbjct: 382 TFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVAKRLSTSIRKTDTLARMGGD 441 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L+++ + + + + L + + + + LL Sbjct: 442 EFLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGHELFITPSMGISIAPTDTQHPKELLA 501 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 Q+ ++ + ++ L + +R A++Q +LY QP + Sbjct: 502 FAEIAMYQAKGLGGNKC-QFYTAEMNSRAKTRIELESYLRKAVNQDQFVLYYQPQFDIQS 560 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 E G + +L G+++P+ F+PL + + VL+ Sbjct: 561 GELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHSP 620 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VN+ P + I R+ + I P+ + LEITE + +S++ ++QL Sbjct: 621 IRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKA 680 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +AIDDFGTGY++ LKR +KID FV+DI T+ DA I +++ LA + +L Sbjct: 681 KGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNL 740 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE +ETQ+Q L + G + QGYL P Sbjct: 741 KVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVAKE 776 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 101/558 (18%), Positives = 203/558 (36%), Gaps = 32/558 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 + + +S+++ + + ++GY Sbjct: 470 AHKQAEESLITLSAAVEQSPVSIVISDPRGLIEYVNPMFEQVSGYRRAEVMGQNPRILSS 529 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRI 311 K + + + + + + + + + +A + L + Sbjct: 530 HEKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQAAIAPIFDDHGRPIHYLAIKED 589 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + + A D LT LPN R L +Q + + +DN + + Sbjct: 590 ITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRSRRHGALLFIDLDNFKNL 649 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-----RLQHMV 418 + G ++ + + L ++E + + +L G + +++L + + + + Sbjct: 650 NDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQDLSEQQTEAATQAEGVG 709 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + F+ +Q+T++ LL + Q+ L Sbjct: 710 QKILDALHQPYPFGHFTHHGSASVGVALFNASQDTVEELLKRADLALYQAKDAGRN-TLR 768 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIM 533 + + + + + +R L + LLY QP N G + ++ G++ Sbjct: 769 FFDPDMQAVISARAEMEADMRLGLQENQFLLYYQPQVNHAGRLIGVEALVRWQHPLRGLV 828 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAG 591 P F+PL L V+E+ + L +VN+ L ++ Sbjct: 829 APAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIAVNVSALQFHGESFVS 888 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ R + LE+TE + + + + L G ++DDFGTGY++ Sbjct: 889 DVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVGFSLDDFGTGYSSLSY 948 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL D IKID FV D ++N DA +VR+ + + + V+AE VETQ Q+ L Sbjct: 949 LKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGMMVIAEGVETQMQRDFLEGE 1008 Query: 712 GVQYLQGYLIGRPQPLAD 729 G QGY GRP P+A+ Sbjct: 1009 GCLNFQGYFFGRPVPVAE 1026 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 114/564 (20%), Positives = 200/564 (35%), Gaps = 28/564 (4%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---I 249 RR + + + V +L + GY Sbjct: 152 IASDISERRRMEHDLRIAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAIGQTP 211 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLL 306 + + + ++ + + ++ + + Sbjct: 212 GMLKSGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTHYV 271 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 + H A DPLT +PN R L +Q + + ID Sbjct: 272 STFSDISNLKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGALLIIDID 331 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR----- 413 + + ++ G + H + + R L ++E + + G E +++L +E Sbjct: 332 HFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEELGSEQEGAAVQ 391 Query: 414 LQHMVNIL---NSRQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + +R N T F G ++T+ LL Q ++ Sbjct: 392 AEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQADIALYKAKDAG 451 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLK 527 A+ + + ++ L +R AL + + +LY QP + G + +L Sbjct: 452 RN-AIRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAVRRLIGAEALLRWQP 510 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLL 585 ++ P+ F+PL + L + VL+ L SVN+ Sbjct: 511 PGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFLSVNVSARQFR 570 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + ++ R+ +P+ + LE+TE N E + ++ L G R ++DDFGTG Sbjct: 571 QADFVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGVRFSLDDFGTG 630 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 YA+ LKR + +K+D F++DI N DA IVR+I + LSVVAE VE Q Sbjct: 631 YASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVVAEGVEDDLQH 690 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 A L K QGYL GRP D Sbjct: 691 AYLVKHECSLFQGYLFGRPMSFDD 714 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 8/141 (5%), Positives = 25/141 (17%), Gaps = 25/141 (17%) Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN 264 E + + + + GY T + L Sbjct: 30 LQLSIFEHAGRAIILTNPDGL---ISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISA 86 Query: 265 LTW-------------------AVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FS 302 + + +++ + ++ ++VL Sbjct: 87 CARLYSCEPDGTPPAGFGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGV 146 Query: 303 VCLLYMVRIYHRSEWLNRRWH 323 L + + Sbjct: 147 QGYLGIASDISERRRMEHDLR 167 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 114/574 (19%), Positives = 210/574 (36%), Gaps = 25/574 (4%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 L + I A R + L A ++ Sbjct: 214 LFELNGRKAVIGVVMDISERLLADTNLRLAAKVFENSAEGILILDAGAR------IIAVN 267 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 I GY + + + A++ + Y Sbjct: 268 DAFTRITGYAEEEALGKASRIFSAEQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAEL 327 Query: 294 ILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-- 348 ++ L + + + + R A DPLT LPN L + ++ Sbjct: 328 SISALRDEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPLTRLPNRSRLTASLDEALTR 387 Query: 349 ------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + +D + ++ +G + + I L ++ E L +L G E Sbjct: 388 MDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFT 447 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L++SG ++ +L M + + + + + + + F + + LL Sbjct: 448 LLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTLLKNAD 507 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EG 516 ++ + ++ QT +++LL N +R AL++ + L+ QP + Sbjct: 508 VAMYRAKEAGKN-TYQFFDIGMNTQTFERLLLENGLRMALERHEFELHYQPQLSAGERAL 566 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RF 575 G + +L G++ P +F+ L + L VL + LA R Sbjct: 567 AGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRL 626 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL P Q ++ ++ + ++ + LEITE + ++ + +L G Sbjct: 627 AVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGV 686 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++IDDFGTGY++ LKR D +KID FV+ + + +A I +I +AK VV Sbjct: 687 WLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVV 746 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VE+++Q A L G LQGY GRP P + Sbjct: 747 AEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGE 780 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 38/146 (26%), Gaps = 9/146 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVP 245 + S R++ E R L + + + ++ L + I GY Sbjct: 99 VGSVDTDITQARQEQKAKREAEDRYLALVEQSLVGIYIMQDEKLAYVNPKLAEIMGYQPE 158 Query: 246 VF----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-S 300 + R L + +++Y L+ + + + Sbjct: 159 EMEGMTMPQLLVPGEAERLRQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLFELN 218 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQA 326 ++ +V + L A Sbjct: 219 GRKAVIGVVMDISERLLADTNLRLAA 244 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 125/682 (18%), Positives = 227/682 (33%), Gaps = 31/682 (4%) Query: 78 NFHLSFLQTAVMLGSQTFVVL----CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 L ++ A + + + + L R +L + Sbjct: 217 AHLLGWVYAAFRMRDVLASLYGDQPAGLYLSIYDGTQPSAESLLYRSSEPKLRDVVSANE 276 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + S P + F +A + L+ L +R + Sbjct: 277 YLVVGGHDWTLSMTAQPDFKARFGHNAKLLIACTGAGLSLLLALLAWSLASGRSRAMRLA 336 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---II 250 R A +L + +L GY Sbjct: 337 SKMTAEVRESEAELRIAAVAFDSLEGMMVTDADGTILRVNSAFTKCTGYTADDVIGRNPR 396 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLY 307 F ++ + + + Y + + + Sbjct: 397 LLSSGRHDAAFFRDMWETIHRVGGWQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHYVG 456 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + + A D LT LPN L + + + +DN Sbjct: 457 THYDITERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDLDN 516 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRL 414 + ++ G + + LL ++E + + ++ G E ++VLS E Sbjct: 517 FKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAASET 576 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + SR + T F G++ ++ LL Q +S Sbjct: 577 EGAAEKVLTALSRPYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDLAMYKSKESGRN 636 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NK-EGEGYDEILARLKYD 529 A+ + + ++ L +R A+D+ LL++ Q N G + ++ Sbjct: 637 -AICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEALVRWQHPQ 695 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQK 587 G++ P +F+PL + L +VL++ + LA D+ +VN+ L + Sbjct: 696 HGLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQLREN 755 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ R P + LE+TE N E + + L G ++DDFG GY+ Sbjct: 756 SFVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGVGYS 815 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL +KID FV+D++ + DA+I R+I LA++ L V+AE VETQ Q+ Sbjct: 816 SLSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQRQF 875 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G QGYL RP P+ D Sbjct: 876 LADAGCHAYQGYLFCRPLPIED 897 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 111/600 (18%), Positives = 207/600 (34%), Gaps = 65/600 (10%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL----LLLCTPYENDFIAGYLVPVFF 248 + + A + ++ + + + GY Sbjct: 322 IVEDIDQQVKADEALKVILNEQNLILDYAMVGIVFLKNRSVTRCNQRFEEMFGYNAGELA 381 Query: 249 IIFTLGVGKLRYPFLNLTWA----VSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFS 302 + + A +S + + + + + Sbjct: 382 GSSSRQWYLTEQDWKAAGKACYKPLSQGKVFQDEMLLSRKDGSPIWCEVTSKAIDPDDLA 441 Query: 303 VCLLYMVRIYHRSEWL---------------------------------------NRRWH 323 +++ + R Sbjct: 442 KGSIWITMDITERKAADVALARAHEDLELRVKERTKELAKANMDLLVEINERKMAEERVK 501 Query: 324 LQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHC 375 AL D LT LPN LE+ E + + +D + ++ G Sbjct: 502 HMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVNDTLGHHEGDQL 561 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--RQ-IHWNNTG 432 + + L ++ N+ + +L G E ++VL+ + ++ + + + Sbjct: 562 LVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFKPAVKLALQD 621 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + + ET L+ + A A + +++ L Sbjct: 622 MFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCA-QYFNRSLDDSLKERISLE 680 Query: 493 NTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N + AL G LY QP + G + ++ + G+++PD F+PL + L Sbjct: 681 NALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIV 740 Query: 550 RFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VL LA SVNL L + +++ A + + + Y + + Sbjct: 741 DIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLD 800 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LE+TE NAE ++ ++++H G +I++DDFGTGY++ LKR D +KID FV+ Sbjct: 801 LELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQ 860 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DI +T DAMI ++I +A +L V+AE VET Q LL G + QGYL +P P+ Sbjct: 861 DITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVE 920 Score = 44.6 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 11/150 (7%), Positives = 36/150 (24%), Gaps = 15/150 (10%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---------LLCTPYENDFI 239 ++ + ++ K + A + + ++ + I Sbjct: 188 LVQLRELDIDQFIQNEHSLRNTLKEQEVIFEHAGTGICFIKDSQDHERKIIRCNRKFADI 247 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWA----VSTLCLLNYNQNFLQGVETEYSLAFIL 295 Y V + + F L + + L + T + Sbjct: 248 YDYRVEELIGQSSSILYPDFEAFSELGDSAYPSLMEGTLYTQKMKMKRKDGTLFWTQIRG 307 Query: 296 AVLISFS--VCLLYMVRIYHRSEWLNRRWH 323 ++ S + +++V + + Sbjct: 308 NIISSNEPGLGYIWIVEDIDQQVKADEALK 337 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 113/667 (16%), Positives = 222/667 (33%), Gaps = 35/667 (5%) Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVG----- 144 L + + G L + +L L + P + Sbjct: 24 LHVLVAGLKADFRLKTAISGASALALLAQQADQPKLVVLDVKMPGMSGIEVLRRMRDDPH 83 Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 + + +S + I + + + + + R ++ + +I R Sbjct: 84 TSDIPVILLSADASEQSEIAGLHLGANDYLVKPVSTNVLIVRVRNLIQRNADRIQLRLAA 143 Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYP 261 + + + ++ + GY F R Sbjct: 144 HVFEYSGE---AIMITDRDNQIV---DVNAAFTTLTGYHKSEVLSKNPKFLSSGRTTRKE 197 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWL 318 + + A+ T + + + ++V++ + L + Sbjct: 198 YQAMWAAIRTGGFWQGEFWDRRKDGSVFPKMMTVSVVLDRAGDIDFYLANFVDVSHYKET 257 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLM 370 RR A D LT LPN L+ EQ + L +D + ++ G Sbjct: 258 ERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIAKRMSEQLAVVFLDLDRFKTINDTLGHP 317 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIH 427 + + + L +++ + + +L G E +++L G + + + ++ Sbjct: 318 VGDDLLIQVADRLKTSVRQYDMVARLGGDEFVMILRGHDMPSVASAVAEKIRLHLNQPFQ 377 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 L + GN E + L+ + + ++ + Sbjct: 378 IGQHTLRTATSIGIALYPGNGERMDDLMKHADTAMYFTKSEGGN-GFCFFSSDMNLHAHE 436 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L N + AL+ LY QP + + G + +L + G ++P F+PL Sbjct: 437 KLELENLLHGALENQQFELYYQPQLSLPEQQVIGAEVLLRWHHPEKGFISPAVFIPLAEA 496 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 N VLE+ + + D R VN+ KN+ + R+ + Sbjct: 497 TNQIGAIGEWVLENACRQASQWLRDGLPLPRIGVNVSGRQFQDKNLFTLVKRVLAETGLP 556 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + LEITE ++ + + ++ L + G +A+DDFG GY++ +L+ L D +KID Sbjct: 557 ADRLELEITETAVTASPDEAARLLQSLRECGIMVALDDFGQGYSSLGQLRDLPIDRLKID 616 Query: 664 GVFVKDIVTNTL--DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 FV+DI I + L SV+AE VETQ Q + L G +QGY Sbjct: 617 AAFVRDITDEPGHPGGAIAAATIGLGHNLGFSVIAEGVETQAQLSFLMAHGCDEVQGYYF 676 Query: 722 GRPQPLA 728 +P P Sbjct: 677 AKPMPRE 683 >UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9K4_9GAMM Length = 938 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 104/595 (17%), Positives = 209/595 (35%), Gaps = 37/595 (6%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 F+++ LSL + L L ++ + + + Sbjct: 326 FSLLSCLSLIITFGVALWLRKAFMSYHTHSQKQHELLLQNKTELELSAR----VFDSTSE 381 Query: 224 SVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 +++ ++ I GY + ++ A++T L Sbjct: 382 GIMITDEFNQIITCNSSFCRITGYSKEEIIGLTPNTFASGLTDPDIYSDMWHALTTKGLW 441 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + + V + + + + A D LT Sbjct: 442 QGEVINQHKQGHLFPEWLSINVYKDKQGKAINYIGTIVDISKRKQAENTLQHLADYDSLT 501 Query: 333 LLPNFRALEQAPEQEA-------------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 LPN R ++ + + L +D +F++ G ++ I Sbjct: 502 DLPNRRFFKEQVDHIIEIDKQRKPTEPINKFALLFLDLDYFKFINDSLGHSAGDKVLKII 561 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMG 436 LL +N + +L G E ++VL +E ++ L + ++ L + Sbjct: 562 ASRLLEHKDKNTIISRLGGDEFVIVLQDIASEKAVKQFCFELMQNIEKPMNILGRSLIVT 621 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + + LL ++ + + ++ K++ L N +R Sbjct: 622 PSIGATLYPKDGNRTNILLKNADAALYRAKENGRN-NVQFFTANLNRDALKRLSLENDLR 680 Query: 497 TALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL++ +Y QP N + G + ++ G ++P +F+P+ + + Sbjct: 681 RALNRNQFEIYYQPQVNLNTKQVIGCEALIRWHHPTKGFVSPIEFIPIAEETGIINEIGE 740 Query: 554 QVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 +L + A + ++NL + +++ + + + LEIT Sbjct: 741 WILFEACQQAANWCNEYGREIDIAINLSARQF-DDTLVSTVLKALNQSQLPSHCLTLEIT 799 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + E ++ + QL + ++A+DDFGTG+++ LKR D +KID FVKD+ Sbjct: 800 ESILVQDPEQVIHTLTQLRQSSIKVALDDFGTGFSSLSYLKRFPLDKLKIDRAFVKDLPN 859 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 NT D I+ S+ +AK L+ +AE +E Q+ALL L QGY +P Sbjct: 860 NTDDGAIIASVLAVAKHFQLTTIAEGIENTDQEALLEALNCTQGQGYFYDKPLTA 914 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 95/595 (15%), Positives = 205/595 (34%), Gaps = 43/595 (7%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 +V +++ + + + + + I + R+ + Sbjct: 468 HISVSLVITAMRSPAHGIVGYLGIAQDITERKRQENTLRKLSQVVEQSPT---AVILTDP 524 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 + + I GY + + +L ++ + Sbjct: 525 QGN---IEYANPKFTQITGYSLTEVHGKNPRLLKSGETSAEEYRDLWTTITAGREWHGEF 581 Query: 280 NFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + + + ++ + L + + + A D LT L N Sbjct: 582 HNKRKDGSLFWEHASISPVRNDAGDISHFLAIKEDITDRKRYEEQLQHLATHDNLTGLAN 641 Query: 337 FRALEQAPEQEAGKSFCCLRID---------------NLEFMSRHYGLMMRVHCIRSICR 381 L+ EQ + + ++ G ++ Sbjct: 642 RALLQDRLEQSILFA-------KRSGRLVAALLLDLDRFKIINDSLGHSFGDRLLQIAAD 694 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYG 438 L ++ + + +L G E +++L+ E + + + R + + + Sbjct: 695 RLRESVRGADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITAPFQIADREITVTAS 754 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + E + L+ Q+ A ++ + + + +R A Sbjct: 755 LGISIYPQDGEDEETLIRNADIAMYQAKEEG--NAFRLYAPEMNIVVHEAMEMETDLRRA 812 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 LD+G+LLL+ QP + + G + ++ G++ P F+PL + L V Sbjct: 813 LDRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWV 872 Query: 556 LESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 LE++ + + + NL + I R+ + + P + LE+TE Sbjct: 873 LENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLLELELTES 932 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 N +++ +++L+ G +A+DDFGTGY++ L+R D +KID F+ D+ + Sbjct: 933 MIMRNVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDP 992 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A + SI +A + L VAE VET++Q L + QGYL P + + Sbjct: 993 SAAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEE 1047 Score = 84.6 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 27/322 (8%), Positives = 66/322 (20%), Gaps = 22/322 (6%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT 74 L + + ++ + + L ++ IL + W+ + ++ Sbjct: 13 ALLLAMAFIYDMMTSRYRLKHRLIVQIC--VGISLGLLSIILMLSPWQYIPGIVFDTRSV 70 Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 L L F A + + + Sbjct: 71 LLGISGLFFGAVATSVAMLMAAAFRLFQGGAAAWIGVGVIFASGIVGIYWKYRNRKSAEQ 130 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 +Y G + L L +++ T M+ S Sbjct: 131 LTWWQLYGFGVLVHLI-----MLAFMLLLPWQTAFRVLHHISLPVLLIYPLATAMLGSLM 185 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFI 249 + + E+R + + L + E I GY F Sbjct: 186 LKRQRRDQISKALQTSEERLRMALKASKQGLYDLNVQSGNMIVNAEYALILGYDPQNFRE 245 Query: 250 IFTLGVGKLRYPFLNLTWAVST------LCLLNYNQNFLQGVETEYSLAFILAVL----I 299 + ++ + AV + + ++ Sbjct: 246 TNGDWIARMHPEDRSAVLAVYRNYLAGKTEEFRAEFRQRTRCGQWKWVLSMGKIVERDTH 305 Query: 300 SFSVCLLYMVRIYHRSEWLNRR 321 + +L + Sbjct: 306 GQPLRMLGTFSDITERRQSEEQ 327 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 111/620 (17%), Positives = 219/620 (35%), Gaps = 28/620 (4%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY-LTRMIVSP 193 G+ L ++ DA V+ L++ + + + + R+ + Sbjct: 39 GVCTLFPLDHLAMAMGVEGYAGIALTDAAGNVLGPLAVLSRRPLGDSELAETMLRIFAAR 98 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFF 248 A++ + + L + + G Sbjct: 99 ASAELERTKAEQARREQLHFLQVLIDSIPHPIFYKDADRRYIGCNAALESFIGRTREEII 158 Query: 249 IIFTLG---VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFS 302 G+ R ++ + +Y+ + + + F V Sbjct: 159 GKTVFDIGAEGRARICDAVDRKLLANGGVESYDSTMIHTDGSIRDIIFSKTVFGNTDGSI 218 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 ++ + + A D LT LPN L + G Sbjct: 219 GGIVGTILDITERKRAEEAIQQLAYFDALTGLPNRTLLRDRVSQLLSQARREGGGFGVLH 278 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + ++ + ++E++ + +L E +++L G E + Sbjct: 279 LDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRESDTVARLGSDEFVVILPGVGHEEDV 338 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 +V + +R I + + + + LL ++ Sbjct: 339 VAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGGD 398 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 ++ + +++ L ++R AL++ + LL+ QP+ + G + +L Sbjct: 399 -GYQFYSSELNHRAMERLTLETSLRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSP 457 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 + G+++P +F+PL + L VL S + L SVN+ Sbjct: 458 ELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSARQFRHD 517 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + P+ + LE+TE +E++ + +L + G +AIDDFGTGY+ Sbjct: 518 GFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYS 577 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK D +KID FVK++ + +A I +I LA +L VVAE VET +Q A Sbjct: 578 SLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAF 637 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 L L +QGY I RP P Sbjct: 638 LAALRCDVVQGYHIARPLPP 657 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 111/604 (18%), Positives = 208/604 (34%), Gaps = 27/604 (4%) Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 ++T F L + R + +Q Sbjct: 377 ALATNRQVEFEYFDAPLGKWLEVRAYPFAEGLAVYFRDVSERRNSQEQLMLLETGIARLN 436 Query: 212 KRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + ++ + GY G G + + A Sbjct: 437 DIVVIVEASPHHGSGPQIVFVNDAFERHTGYTRDEVLSRMPGMLQGPGTRQDELARIFSA 496 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + + +A + + R + + + + H Sbjct: 497 LQQWKQARGELVIYRKDGGSFWVDLEIVSVAAQNGDLTHWVAVGRDITQRKAADEKIHHL 556 Query: 326 ALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN + L EQ + +DN + ++ G ++ Sbjct: 557 AFYDPLTELPNRQLLLDRLEQALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQ 616 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH-----MVNILNS---RQIHWN 429 + L +++ + + +L G E +++L T+ + + + Sbjct: 617 KVAVRLKGCVRKLDTVARLGGDEFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDLA 676 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 F+ Q ++ LL Q Q+ + + + + Sbjct: 677 GYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTMGRN-TVCFFDPDMQASVSANA 735 Query: 490 LLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L +R L + L++ QP + + G + +L G+++P +F+P+ + L Sbjct: 736 ALSTDLRAGLREHQFLVHYQPQVDREQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGL 795 Query: 548 SARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 VLE LA + G +VN+ + ++ K I P Sbjct: 796 ILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPH 855 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE E ++ + L G +A+DDFG GY++ LKRL D +KID Sbjct: 856 NLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKS 915 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F+ D+ ++ DA I +I LA++ L V+AE VET+ Q++ L LG Y QG+L P Sbjct: 916 FIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPL 975 Query: 726 PLAD 729 P+A+ Sbjct: 976 PIAE 979 Score = 51.9 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 27/287 (9%), Positives = 52/287 (18%), Gaps = 21/287 (7%) Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVV---LCACAILRWQLGTRWRYGLTSRYV 121 V L S + + + A Q+ R LT Sbjct: 32 GLVQLAARFCGTGAAILHLAGEETTSSSWSVGLPEKADSLADFYAQVLLRGGQPLTITDA 91 Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 G + A+ I Sbjct: 92 ATDPTLSRHPLVAGPAGLRFFAAVPLIASDGTPLGVLAVMDAAARACRDGDLDALNILGR 151 Query: 182 LFYYLTRMIVSPH----FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCT 232 + + ++ E R A + L L Sbjct: 152 QVVAQLDLRRQHKFLADRSAEREQQSRMRLQHSENRLHIAMRTAQMGNWSLNLADDSLTL 211 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV----STLCLLNYNQNFLQGVETE 288 E I G + + L + L + + L + Sbjct: 212 SSEFPAILGTSAAMPQTLEELLLHYAAESRGRLRHVISECARKGTPFDEEAQMLTAQDGR 271 Query: 289 YSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + I V+ + ++ + + A+ LT Sbjct: 272 RWVRIIGEVVRDGQGAITRIQGALQDINARKQAQEETLRLAMR--LT 316 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 115/719 (15%), Positives = 249/719 (34%), Gaps = 46/719 (6%) Query: 56 LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG 115 + G+ ++ + S + ++++G +V + + G + Sbjct: 182 WVLIGYFIAQSLVIYAVISLYRREEYSSSRISLIIGFTIILVYGYIHLFQLNAGIKPSSE 241 Query: 116 LTSRYVWQRLFWLGLVTPIGIK----------------CSMYLVGSFFDFPLKISTFFGD 159 ++ + +GL + + I +++ F F Sbjct: 242 VSYLIHTASILLIGLSSILYILDKPIQHETKTKYYRFDYVRFILPYFSIIITFSFIIFQP 301 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW-----RRDIAPSLGKEKRA 214 D F ++ L+ + + + + + ++ + + E+R Sbjct: 302 WDDKFMLIGLVLSLILLFLRQLYMWKDNQALIDTYEQLTTQLEGKVEEGASALSKSEQRY 361 Query: 215 FTLSWLAALSVLLLLLCT-----PYEND--FIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 +L +V L + + F A Y + + K Sbjct: 362 KSLFEDHPDAVFSLNMYGIFQQSNTACESLFTAYYCEVESYSLLHFIDPKDHDLLQKALQ 421 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + Y L L + V + + R ++ Sbjct: 422 LTKEGSPQTLEVRTKEKEGYYYYLHITLIPTFINKEVVGMFGIARDITTLYEKQKQVEHL 481 Query: 326 ALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN R E+ + + L +D + ++ G + + Sbjct: 482 AFHDALTGLPNRRKFEKDLKNILNTAQASANDVAVMFLDLDRFKKINDRLGHGIGDLLLI 541 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLD 434 + + L ++ + + + G E ++L +E + + + + + L Sbjct: 542 EVAKRLRGCLRSKDVVARQGGDEFTILLPDMYSEKSAAFIAEQILNILNKPFFIKDEELS 601 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + + L+ ++ A+ + +S + L Sbjct: 602 ITPSIGIAMYPDCGTDVTELMKNADMAMYRAKANGKNR-FVFFSKEMSIAQNESNFLEGE 660 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 + AL Q + L QP + K+ G++ ++ GI++P +F+PL + Sbjct: 661 LSKALQQNEFFLEYQPQVSTKTKQIIGFEALIRWKHPKLGIVSPAQFIPLAEETGFIIEL 720 Query: 552 DLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 +L + + VNL + ++ I ++ + + P+A+ +E Sbjct: 721 GNWILRTACLEAKRWHNQGFSHLKVGVNLSVVQFNHADLIPTISKVLEETELKPEALDIE 780 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE A + +S + +EQL G +I+IDDFGTGY++ L + + +KI F+ I Sbjct: 781 ITESIAINQNQSVVAKLEQLQNLGIQISIDDFGTGYSSLAYLTKYPINTLKIAREFICGI 840 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ L+ I+ SI L+K +L V+AE VET++Q L++ ++QG+ I +P D Sbjct: 841 TTSPLEEAIISSIITLSKELNLEVIAEGVETEEQWKFLYEQNCDHIQGFFISKPVSSKD 899 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 694 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 121/733 (16%), Positives = 237/733 (32%), Gaps = 37/733 (5%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L L + L QL R S +I + + + + + Sbjct: 28 LLTVLGLSLAQLERLQSLKGLIFVGLTAALLYLVLHRHAQQYRRARLQLTSNEERLRLAL 87 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + A L Q R R + Sbjct: 88 DATRDGLWDWDFAAQRVFFSPSYAALLGLTPQALGDTRDAWAERLHPEDRER-------- 139 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + +D + L F + I Sbjct: 140 -VLQALALDQQYDSYDNVYRLRHADGTYRWFHSRGRLLRDEGGRPQRFIGIASDITQQRA 198 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIFT 252 R+ A ++ + ++ I GY Sbjct: 199 NDESLRQAAAVFDATQEG---VLVTDPEQRIVH---VNPAFSRITGYSAEEVLGQHPTLL 252 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMV 309 + +L A+ + + Y + V+ + + Sbjct: 253 KSGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISHYVAVF 312 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLE 361 + R A DPL+ LPN + + + +D+ + Sbjct: 313 SDITALKRSQRELDYLAHHDPLSNLPNRLLFTERIAHALERSKSEQLRGAVLLIDLDHFK 372 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + ++S+ L + L +L G E L+ + + L Sbjct: 373 HINESLGHNVGDLLLKSVGERLQQDLPGGCTLARLGGDEFGLLSETCADAPQAAELAQNL 432 Query: 422 N---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + L +G F + ++++ +L ++ + Sbjct: 433 LRCLEAPFRLDEHELYIGASIGISLFPDDADSVEQVLRNADSALFKAKSSGR-EGYAFYV 491 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTP 535 + ++ ++V L +++R ALD +L ++ QP+ + E G + ++ G++ P Sbjct: 492 QELTDYARQRVELASSLRHALDNHELRVFYQPLHDLENGNPVGMEALVRWQHPQRGLIPP 551 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRII 594 +F+P+ + D VLE + + R +VN+ + + ++ Sbjct: 552 AEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEGSALRFVAVNVSSRLFSRGELDLKVA 611 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++ +SPQ + LE+TE + ++++ + +L G R+AIDDFGTGY++ RLKR Sbjct: 612 QVLAETGLSPQQLELEVTESAIMEDPDAALSLLTRLRALGVRLAIDDFGTGYSSLARLKR 671 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +K+D FV+ + + DA I R++ L + L+V+AE +E+ Q L LG Sbjct: 672 LPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLGLNVLAEGIESPAQVDFLRALGCD 731 Query: 715 YLQGYLIGRPQPL 727 Y QGY GRP P+ Sbjct: 732 YGQGYHFGRPAPV 744 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 112/585 (19%), Positives = 218/585 (37%), Gaps = 37/585 (6%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW----LAALSVLLLLLCTP 233 I + Y ++ A R A + A SW + + + Sbjct: 115 INWHVLGYRVSYMLRASGALEQLRESRAGLAHAQSLAHIGSWEWDLVTGEIRCSEEVYSI 174 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET--EYSL 291 + P+ + L G ++ A+ L+++ G ++ Sbjct: 175 CSIERSFKGGNPILDPVHPLDRGFVQGSIDE---AIGKRAPLSFDYRITLGGGERTLHAE 231 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 + +VCL ++ + + L A D LT LPN R Q EQ Sbjct: 232 LVTVLDEQGEAVCLTGTIQDITERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFA 291 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ-------- 395 + L +D + ++ G + ++ + LL ++ + L + Sbjct: 292 NRYDRMLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPS 351 Query: 396 ----LPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 L G E ++LS E + + + + + + + Sbjct: 352 LVSRLGGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDA 411 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T L+ Q+ +E ++ + ++++L + + AL + + ++Y Sbjct: 412 TTASDLIRNADGAMYQAKEQGRN-GYQIYDESMNAKALERIILESQLHKALKEEEFIVYY 470 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G++ P +FLPL + L + D V+ + Sbjct: 471 QPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKL 530 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 ++N+ ++ + + + K + P + LE+TE ++ E ++ Sbjct: 531 WLDAGFPPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTV 590 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ L G R+AIDDFGTG+++ LKR D++KID F+ DI T+ DA I + Sbjct: 591 KTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATI 650 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++A L V+AE VET+ Q L K G QGYL +P P + Sbjct: 651 EMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTE 695 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 119/672 (17%), Positives = 228/672 (33%), Gaps = 41/672 (6%) Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFF 147 + G +C + + + +W L L + S+ + + Sbjct: 223 AIDGGAIGPSAGSCGTAAFTGKEVLVSDIANDPLWAAYKELALSHGLRACWSVPIRSTKG 282 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 + ++G A + L YL + + R+D Sbjct: 283 KVIGTFANYYGVARIPSD---------SELQSARRSAYLLSLAIENDLNDRQIRQDRQAI 333 Query: 208 LGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 + ++ L L + G + + P Sbjct: 334 EEAGLYRQAILDSMVDGLVTLDLNGRIHTFNNAACRMMGRDPEAPRPQTLSELLGTQLPL 393 Query: 263 -----LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS-FSVCLLYMVRIYHRSE 316 L+L V + + N ++ + + + +R + Sbjct: 394 NVQGHLDLLSTVDGIEGASAEVNGRHANGAIRPISVSASRIPHTEHDTFVVTLRDITQQR 453 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYG 368 A DPLT LPN R L Q + L +D+ + ++ G Sbjct: 454 QDEEEIRRLAFYDPLTGLPNRRLLMDRVRQAMVNSARLGQHGALMFLDLDHFKLLNDTLG 513 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----EGRLQHMVNILNS 423 + ++ + L ++E + + +L G E +++L G + + + + + Sbjct: 514 HDVGDELLQQVAYRLRNCVREGDSVARLGGDEFVVLLEGLSDNRTDAANQAEVVAHKILD 573 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 G + F + ET+ LL + Q+ A A + + Sbjct: 574 ALALPYSLRGHGYNSTPSIGIVVFMEDHETMDDLLKKADVAMYQAKAAGRNTA-RFFDPV 632 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKF 538 + T L IR L + + +L+ Q + G + ++ G+++P F Sbjct: 633 MQAAVTTHAELAKEIRLGLQRHEFVLHYQVQIDSQGRCTGAEALVRWNHRVRGLVSPAHF 692 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 +PL + + V+ES + L +VN+ L Q + Sbjct: 693 IPLAEETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQPEFVASVREA 752 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +R + LE+TE + E + + + + G ++DDFGTGY++ LKRL Sbjct: 753 LQRSGAPAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSSLSYLKRLP 812 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID FV+D++T+ DA+I R++ L + L+V+AE VET +Q+ L + Sbjct: 813 LSQLKIDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDALAAMQCDAF 872 Query: 717 QGYLIGRPQPLA 728 QGY GRP P Sbjct: 873 QGYYFGRPAPAD 884 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 100/550 (18%), Positives = 202/550 (36%), Gaps = 22/550 (4%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI---IFTLG 254 + + + + + ++ + + I+GY Sbjct: 571 AQKKAEEQALTLSQAIEQSPISMILTNIDSKIEYVNSAFEKISGYAASEVIGQSASMLKS 630 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRI 311 + + L A+ST + + +A + + L + + Sbjct: 631 GLTPKSLYKQLWDAISTGHAWQGELQNRKKNGDIFWEHAHIAPIFDNAGVTKHYLALKQD 690 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + + QA D LT LPN + + L +D+ + + Sbjct: 691 VTQYKQQEEKILHQAHYDSLTGLPNRLLSLDRLSQMLKDAHRAKNNVAVLFLDLDDFKKV 750 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + L ++E++ + +L G E +++LS ++ + + L Sbjct: 751 NDTMGHSVGDELLIQAAVRLKNTIRESDVVGRLGGDEFIIILSNINEPIEVEIIASKLLE 810 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + N L + + E + LL Q S + Sbjct: 811 QFYQPFRLENRELVSTISIGIALYPLDSEDPKELLRQADSAMYHSKDRGRN-TYNFYTHQ 869 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 ++ +++ + +R+AL Q + +Y QP + ++ G + +L G +TPD+ Sbjct: 870 MNHDMDRRLKIEEQLRSALKQKEFEVYFQPFVDIKSRKIIGAEALLRWNNALLGQVTPDE 929 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ Q L V+E + ++N+ P + + Sbjct: 930 FIPIAEQTGLIVSIGQYVIEVAFATAKKWQQTYNPYFKIAINVSPKQFRENTFVDMLNIQ 989 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++ I + LEITE S+ N+ ++ G I++DDFGTGY++ L+ Sbjct: 990 LDKHQIHASTIELEITEGVLLSSDAVIDSNLISINDIGVSISMDDFGTGYSSLSYLRSYP 1049 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 + +K+D F+ DI + D +V + + +L+VVAE VET++Q LL+ L Y Sbjct: 1050 FNTLKVDKSFINDITVDPGDLELVGAAIAMGHGLNLTVVAEGVETEEQYHLLNALKCDYG 1109 Query: 717 QGYLIGRPQP 726 QGYL +P P Sbjct: 1110 QGYLFSKPLP 1119 Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 9/140 (6%), Positives = 32/140 (22%), Gaps = 7/140 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLV 244 IV + E + A +++ + + GY + Sbjct: 312 IVGVSRDMADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTL 371 Query: 245 PVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F I + + + ++Y + + + ++ Sbjct: 372 DELFNKPIGDIETSENHQFSTQNIITAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDGDD 431 Query: 303 VCLLYMVRIYHRSEWLNRRW 322 ++ + ++ Sbjct: 432 GMFFCFIKDISQRINAEQKL 451 Score = 58.1 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 66/318 (20%), Gaps = 39/318 (12%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 F I + +P + + W+ L + FG+ + + Sbjct: 42 FIGM---IAICVMNNPWELRPGIFFDTRWVLLSLS---GLFFGF-----IPTLIATILAA 90 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 F L + +G+ + A + WQ L +G V IG Sbjct: 91 CFRLYQGGAGLYVGTLIIFISSAIGLGWRYWMKSANKQP----NWQNLLAMGFVVEIG-V 145 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 L+ D I T ++T ML L + Sbjct: 146 LLCLLLMPVADKYDIILTISPTLFTVYT------------CGTMLIGLLLKQHQQRQQIS 193 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFII-- 250 ++ ++ + + L Sbjct: 194 QELHHHKNLLETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNPEDIKHKTD 253 Query: 251 -FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 + + + + + + S ++ Sbjct: 254 YDLFDRQQADSFIKADRFVLQENQPWMDEEWITTPDGIAHIFKTHKTPFVDSSGDIQGIV 313 Query: 307 YMVRIYHRSEWLNRRWHL 324 + R + + + Sbjct: 314 GVSRDMADRKLIEEQLRR 331 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 16/176 (9%), Positives = 40/176 (22%), Gaps = 29/176 (16%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPVFFI 249 L E + + + ++ ++ + GY Sbjct: 440 DISQRINAEQKLLLSESKFRHIFENIPSISVQGYDKNRSVIFWNQASEKLYGYTKEQALG 499 Query: 250 IFTLGVGKLRYPFLNLT-----WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFS 302 + ++ W + +L + + ++ ++ Sbjct: 500 KKLEDLIIPPPYREHVINNVNAWINEGVPILAEELLLQRADGSNVAVYSSHTLINNTDNE 559 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRID 358 + + + + LT L QA EQ + S ID Sbjct: 560 AEMYCIDIDLSAQKKAEEQ--------ALT-------LSQAIEQ-SPISMILTNID 599 >UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9A3_KANKD Length = 1515 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 109/729 (14%), Positives = 230/729 (31%), Gaps = 38/729 (5%) Query: 26 QLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVL-CGMFCTNLWNFHLSFL 84 L + + S L L + I+ F + + M L Sbjct: 774 ALQIHVKTSGWLTPSAFTLYGFILGL---IILAFSYLIWARMRERRMAALQLTQSEERLK 830 Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVG 144 + G + + L + + + + L Sbjct: 831 LSLWGSGDELWDWQVQSGALHLSNEWPYDFPRDGIRSGYSMANSNIHPNDLPYVRQSLNA 890 Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 D + + + +D + + L ++ RM + + Sbjct: 891 HLADKSMHYESTYRISDEHGGWIWV--LDRGKVVSRDENQKPLRMAGTLKN-ITELKNTE 947 Query: 205 APSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFIIFT---LGVG 256 K + V + + I G+ Sbjct: 948 QQLSMIVKSFD----NISDGVWILDENFHYIAVNKAFTKITGFDESEVLGKLMKVSSLHQ 1003 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYH 313 F +L ++ + Y + + V+ + + + Sbjct: 1004 ITDDEFYDLRNELTEKGFWYGELVAKRKDGDTYPIEINIDVVRDNDGEIINYVGVFSDIT 1063 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRH 366 + R A D LT L N + E + + +DN + ++ Sbjct: 1064 FRKQAERELRRLATVDQLTDLKNRTSFRTLFEHLIEDSGRGDQHALLFIDLDNFKRINDS 1123 Query: 367 YGLMMRVHCIRSICRTLLPLMQE-NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + + + L ++ + N + +L G E ++L +T + + + Sbjct: 1124 LGHGIGDELLIYVAKILQEIVSDQNGVVARLGGDEFTVLLQEVDTWNKPAKIAQAILDEF 1183 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + + + N + + LL + ++ Sbjct: 1184 AKSLPLSTAEVVVSPSIGIVMYPENGTSAEELLKNADTAMYYAKKKGKN-TYQFYTRQMN 1242 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 Q ++ L + +R A+++ + +++ QP + + G + ++ G++ P +F+ Sbjct: 1243 EQAKLRITLESELRQAIEKDEFVMFYQPKVSLQTGKITGMEALVRWRNPRRGLVLPGEFI 1302 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + +V+E + + +VNL + +N+ + Sbjct: 1303 PLAEEAGFIIPISQRVIEKTCLQIRDWQNRGIFHGKVAVNLSAVQFYHENLWETVKNALH 1362 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 I P A+ EITE + S+ + L + G +A+DDFG GY++ LK D Sbjct: 1363 LAKIEPDALEFEITEGMVMEDLAQSLQQMRTLREMGISLALDDFGVGYSSLGNLKDFPID 1422 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV D+ + D +V SI LA + VVAE VE + Q L ++G + +QG Sbjct: 1423 TLKIDRTFVWDLEDSDRDRNLVASIVTLAHNLDIKVVAEGVENRNQVDALREMGCEEIQG 1482 Query: 719 YLIGRPQPL 727 ++ RP P Sbjct: 1483 FIFSRPVPP 1491 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 110/618 (17%), Positives = 207/618 (33%), Gaps = 36/618 (5%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 L + L+ + D + + + I + Sbjct: 435 MLALLDSALQSVDLERLYWRADQTEFWGHLTGQRFVDGN-GEEQGLVGVIADITQRRQTE 493 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIFTLG 254 R ++ + V+ L I GY P Sbjct: 494 AELRIAAIAFESEQGM----AITDPQGVM---LRVNRAFSAITGYSAPEAVGQNPRLLSS 546 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRI 311 + + ++ + + ++ + + + Sbjct: 547 GRHDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTD 606 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + A D LT LPN R L + + +D+ + + Sbjct: 607 LSTRKSAEDQIKSLAFYDTLTGLPNRRLLLDRLKQALASGARHRRQGALLYIDLDDFKTL 666 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS-----GPETEGRLQHMV 418 + YG + ++ + + L ++ + + + G +++L E ++ Sbjct: 667 NNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARPGGDSFVVLLEALSTNSVEAATEAENTG 726 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + S+ + FD QE + L + Q+ L Sbjct: 727 EKIRLALSQPYQIADHAHRSTASIGVTLFDDRQQEGIDEPLKRAELAMYQAKTAGRN-TL 785 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGI 532 + + L +R A+ LLY Q + + G + ++ G+ Sbjct: 786 RFFDPQMQTAVMAMAALEADLREAVRSNQFLLYYQAQVSGERQVAGVEALVRWQHPVRGL 845 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIA 590 + P +F+PL Q L VLE+ LA ++ +VN+ L Q + Sbjct: 846 VPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWASQPERAHLTVAVNVSALQFHQADFV 905 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 +++ KR +PQ + LE+TE +AE + + L + G ++DDFGTGY++ Sbjct: 906 AQVLAALKRAGANPQRLKLELTESLLVHDAEDVIAKMITLKEQGVGFSLDDFGTGYSSLS 965 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL + +KID FV+DI+ + DA I + + LA LSV+AE VET+ Q+ L Sbjct: 966 YLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVALADTLGLSVIAEGVETEAQRDFLAA 1025 Query: 711 LGVQYLQGYLIGRPQPLA 728 G QG+L R P+ Sbjct: 1026 QGCHAYQGHLYSRALPID 1043 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 119/668 (17%), Positives = 226/668 (33%), Gaps = 36/668 (5%) Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 + + ++ R R R G + +F + ++ + + + Sbjct: 144 FRLGELTITASLHRVYDELRRRVGFILATQFLIIFVVSILILWIFRHLVTRHLADMADYT 203 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 + + + + + M+ + +M RD A Sbjct: 204 RDLSLR-NLSRPLELDRPDTPAYQRDELGMVTEAINQMRERLIDDVTRRERDEAEIR--- 259 Query: 212 KRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFL 263 + + SVL+ + + G + G + Sbjct: 260 -KFSKAIDQSPSSVLICDRQWRIEYANRKFSQLTGNSPSEIIGKHPSSLIDPGVDSHEAR 318 Query: 264 NLTWAVS----TLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSE 316 L ++ + + N + Y ++ + S L + + Sbjct: 319 QLWKSIRLQVQRVGVWQGEVNSTRKNGERYWEQLVVTPIKDNNGESTGYLILGEDISIRK 378 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 ++ QA D LT LPN E+ L +DN + ++ G Sbjct: 379 RYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHINDTLG 438 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + R + ++ + +L G E L+VL G + + Sbjct: 439 HDAGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERILKTFAPP 498 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + + F + + LL ++ A +S + Sbjct: 499 FMLSGQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGK-SAYARFTPEMSEVS 557 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ + + +R AL+ G+ LY QPI + + +L G++ PD+F+PL Sbjct: 558 HERLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFIPLA 617 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L V++ + + +VN+ P I+R + Sbjct: 618 EETGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALNDSN 677 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + LEITE N+ + ++QL K G R+++DDFGTGY+ LK D +K Sbjct: 678 LRPELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGTGYSALSYLKSYPFDTLK 737 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D++ DA +VR+I ++A + L VVAE VE + L Y QGY Sbjct: 738 IDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQGYFY 797 Query: 722 GRPQPLAD 729 RP P D Sbjct: 798 SRPLPEQD 805 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 109/570 (19%), Positives = 203/570 (35%), Gaps = 25/570 (4%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + I A + R + A L+ I Sbjct: 473 VIGVLGSYTDITEQKRADLALRLQSRALDASVN---AILITAPSPSGNLIEYVNPAFMRI 529 Query: 240 AGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY + + + + A++ ++ + + +A Sbjct: 530 TGYDLDEVIGHDCRVLQRDDRDQEGVALIREALAANREVSAVVRNYRKDGALFWNQLFIA 589 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + ++ + QA D LT LPN L Sbjct: 590 PVPNAEGVITHHIGVINDVTELIRYQEQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQR 649 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 G + L +D + ++ G + + + L + ++ + + G E ++V+ Sbjct: 650 HHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVARHGGDEFVIVM 709 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + E L + + + + + T L +G F + + + L+ + Sbjct: 710 TDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAM 769 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 ++ + ++ ++ L +R AL + LL+ QP + + G Sbjct: 770 YRAKDMGRN-TFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDIVSGQIVGI 828 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + ++ + G++ P F+PL + L VL + P R SVN Sbjct: 829 EALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVN 888 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L Q+NIA ++++ + P+ + LE+TE NAE ++ + +LH G +A Sbjct: 889 LSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLA 948 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D +KID FV DI + D I +I LA + L V+AE Sbjct: 949 IDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEG 1008 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q L + +QG+ +P Sbjct: 1009 VETSAQLDFLKERACDEMQGFYFAKPLSTE 1038 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/264 (6%), Positives = 44/264 (16%), Gaps = 17/264 (6%) Query: 77 WNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI-- 134 + + + L T + L P Sbjct: 106 GALASLSAARHALQHDLEDTLRGTASDLPGAASATSGAAPTGAPISAPLDASVDSAPSNP 165 Query: 135 -GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + + + + A A ++F ++ L Sbjct: 166 QLASSLERVEAALATLRSEETRSLQAALAASASDSQRAMFVLLVTMLSGSVLLMLTFGVR 225 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC------TPYENDFIAGYLVPVF 247 + R ++R +L + + + GY F Sbjct: 226 ENSVREKLRSARALARNDERFRSLFDDHTVPMYIFDRDTLRFLAVNTAAIEQYGYTESEF 285 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLN-----YNQNFLQGVETEYSLAFILAVLI--S 300 + + + L + + S+ L Sbjct: 286 LGMTIRAIRPTSEVARLERHLARSADLRQSHTMAGIWRHRRKDGSIISVNVSYHALNFMG 345 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHL 324 + + Sbjct: 346 RDASFV-LADDVTDQINAEAEALR 368 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 112/738 (15%), Positives = 226/738 (30%), Gaps = 35/738 (4%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPV-LCGMFC 73 L V+ ++ + + Sbjct: 405 ALHHIARVLAEDAAQIFEYTLPLPDGEHGFEMRMARAGSREVLAIARDITAERDARAALQ 464 Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVL--CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + + L+ + L + A L +RL Sbjct: 465 RSEASLRLAVDGSGDGLWDWDLITDKISFGAAYARLLRYPGNDLARDFRFRERLHPDDRD 524 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 I + G+ F ++ F G+ F + + Sbjct: 525 RSIAAVRNSIEYGTPFVATYRMRCFDGE---YRWFQGRGMCHRDAHGTPQRFSGVLTDLT 581 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF--- 248 A+ R ++ ++ + GY Sbjct: 582 DRLQAEERLRLAAQVFDSTQEGVMITDAR------RRIVSVNRAFTTLLGYTETEVLGQT 635 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCL 305 R + + + L + ++ + Sbjct: 636 PRMLSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHGQVTHY 695 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + + R A DPLT LPN + + L + Sbjct: 696 VGVFTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLLLDL 755 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ YG + ++ + + L +++++ L +L G E L++ + + Sbjct: 756 DRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHDLRHDDDAARL 815 Query: 418 VNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L S + +G + + T Q LL ++ Sbjct: 816 ASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRAKGDGRG-V 874 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + ++ +++ + +R AL G LLL+ QP + G + ++ + Sbjct: 875 YRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDPEQ 934 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNI 589 G++ P +F+P+ L VL + +VN+ P Q ++ Sbjct: 935 GLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQADL 994 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 A +++++ + P + LE+TE ++ +++L G +AIDDFGTGY++ Sbjct: 995 ATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYSSL 1054 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKR D++KID F+ DI + D I +I + + + V+AE VET +Q A L Sbjct: 1055 ASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAFLQ 1114 Query: 710 KLGVQYLQGYLIGRPQPL 727 + QG+L RP P Sbjct: 1115 QRNCDRYQGFLRSRPLPA 1132 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 17/176 (9%), Positives = 42/176 (23%), Gaps = 13/176 (7%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR-RDIAPSLGKEKRAF 215 + ++ L + T + S I R + KR Sbjct: 4 AAGGATLILLLGTAWLVAGPQPASWFTAIQTLLCASLAGWLIRRAARAQEQAEQAHKRVA 63 Query: 216 TLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW--- 267 + AA+ + L L I G V + + +L Sbjct: 64 DVVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDITHPDDLAADLDKVAD 123 Query: 268 -AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLN 319 + + +L+ + + +++ + +V+ + Sbjct: 124 LLAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQFISVVQDITAVKQAE 179 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 75/315 (23%), Gaps = 25/315 (7%) Query: 32 SPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLG 91 + + AW+ + F + L G Q + Sbjct: 4 AAGGATLILLLGTAWLVAGPQPASWFTAIQTLLCASLAGWLIRRAARAQEQAEQAHKRVA 63 Query: 92 SQTFVVLCACAILRWQLGT----RWRYGLTSRYV--WQRLFWLGLVTPIGIKCSMYLVGS 145 ++ R + R V QRL + + P + + V Sbjct: 64 DVVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDITHPDDLAADLDKVAD 123 Query: 146 FFDFPLKIST----FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + + + V +SL F + + I + A+ Sbjct: 124 LLAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQFISVVQDITAVKQAEGDLL 183 Query: 202 RDIAPSLGKEK------RAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 R + L L+ I G + + G Sbjct: 184 RQRRQLQQIIQSIPDCVAVRDLDGRYLLANPAAERLIGLSEAEICGRTLEQIYPEPEAGQ 243 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLYMVRIY 312 + A+S L+ ++ + ++ ++ + + ++ + R Sbjct: 244 ARRADRL-----ALSQNGLVRREASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDV 298 Query: 313 HRSEWLNRRWHLQAL 327 E N R QA Sbjct: 299 S-RERHNLRLLEQAH 312 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/228 (8%), Positives = 45/228 (19%), Gaps = 11/228 (4%) Query: 105 RWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF 164 Q R L+ + +R + + D Sbjct: 241 AGQARRADRLALSQNGLVRREASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDVSR 300 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 +L L A + L R ++ + E+ + Sbjct: 301 ERHNLRLLEQAHRRNHELLAEAERSRLALLSLLEDQQLGQQALAASERHLRAVVAALPDL 360 Query: 225 VLLLLLCTP------YENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 + L + D + V I L ++ ++ Sbjct: 361 IFLFDADGVIVDLWASQQDKLLMPREQVIGRAIADLLPPSLTATALHHIARVLAEDAAQI 420 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + F + + + S +L + R Sbjct: 421 FEYTLPLPDGEH---GFEMRMARAGSREVLAIARDITAERDARAALQR 465 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 113/594 (19%), Positives = 210/594 (35%), Gaps = 34/594 (5%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++ + + ++R + A+ R ++ Sbjct: 414 SVRHMASAGRVLGDRQGEAARVVVVSRDVTERKQAEQWERIAATAFESQQGMF------I 467 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + + +L I GY + + ++ + Sbjct: 468 TDANAV-ILRVNQAFTDITGYAADECIGQTPKLLSSGRHDASFYAAMRESIERNGVWQGE 526 Query: 279 QNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + ++ + + + + A D LT LP Sbjct: 527 IWNRRKNGDVFPEWLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLP 586 Query: 336 NFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R L E + + +DN + ++ G M ++ + + L + Sbjct: 587 NRRLLHDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSV 646 Query: 388 QENEKLYQLPGSELLLVLSGP-ETEGRLQHMVN-------ILNSRQIHWNNTGLDMGYGA 439 +E + + +L G E +++L E L +R + Sbjct: 647 REGDTVARLGGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSV 706 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F G Q + L+ + ++ A AL + + T + + +R A+ Sbjct: 707 GITLFGGQQVGIDELMKRADLAMYEAKASGRN-ALRFFDPRMQAVVTARADIEKDLRAAV 765 Query: 500 DQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + L QP + + G + +L G ++P +F+P+ + L L VLE Sbjct: 766 GRQSFFLAYQPQVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLE 825 Query: 558 SLLKWLATHPCD-KKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + A + SVN+ Q N +++ + R P+ + LE+TE Sbjct: 826 TACAQAALWAARPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESM 885 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N + + + L G ++DDFGTGY++ LK+L D +KID FV+D++T+ Sbjct: 886 LLDNVQDIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPN 945 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D +I R+I LA+ LSV+AE VE+ +QQ L G QGYL RP LAD Sbjct: 946 DEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALAD 999 Score = 64.6 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 29/346 (8%), Positives = 84/346 (24%), Gaps = 26/346 (7%) Query: 1 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + V + L+ + + L VL L+ ++ ++ +L P + + G Sbjct: 105 LVVAYPLLILMGGWLLGLRAAAVLASLTVLAIVGFVVGDAWAWLPTPPPTPAVMHGLVQG 164 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGS--------------QTFVVLCACAILRW 106 +V +L +F + + ++ + + V + + Sbjct: 165 ACSLVALLLIVFLVRSYQSRIDDVRRLASDLAQRTAELQAREADLNRAQAVANVGSWVYD 224 Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 + R + + + + D + Sbjct: 225 LVSGRIDMSAETCRILGLPTGTVGSLDAFMARVHPDDRDTLQQAAAAALRGEPFDNELRL 284 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSP--HFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 V + + F + + S ++ A +++ +S Sbjct: 285 VFGETTRWITQRAEVEFDEEGKPLRSLGTTQDITARKQLEASLREQKEFFRLISESIGEH 344 Query: 225 VLLLLL-----CTPYENDFIAGYLVPVFFII-FTLGVGKLRYPFLNLTWAVSTLCLLN-Y 277 + +L L G + F + R + + Sbjct: 345 IAVLDLQGQRLYNSPSYGQFFGDTRDLRGSDSFADVHPEDRERVKRVFRQTTETGRGQEI 404 Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNR 320 ++ + +A VL ++ + R + + Sbjct: 405 EYRLVRNDGSVRHMASAGRVLGDRQGEAARVVVVSRDVTERKQAEQ 450 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 63/285 (22%), Gaps = 40/285 (14%) Query: 50 CVMLSILFIFGWRGVVPVLC---GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRW 106 ++L W V V G+ + + L L +LG + VL + +L Sbjct: 77 RAAQTVLVWGSWVAVTGVSTFFGGLRALLVVAYPLLILMGGWLLGLRAAAVLASLTVLAI 136 Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 P + G ++ Sbjct: 137 VGFVVGDA----------------------------WAWLPTPPPTPAVMHGLVQGACSL 168 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 V LL + V Y + R+ + A + A SW+ L Sbjct: 169 VALLLIVFLVRSYQSRIDDVRRLASDLAQRTAELQAREADLNRAQAVANVGSWVYDLVSG 228 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVG---KLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + + E I G + R A + + Sbjct: 229 RIDMSA--ETCRILGLPTGTVGSLDAFMARVHPDDRDTLQQAAAAALRGEPFDNELRLVF 286 Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQ 325 G ET + V L + + L Q Sbjct: 287 G-ETTRWITQRAEVEFDEEGKPLRSLGTTQDITARKQLEASLREQ 330 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 91/550 (16%), Positives = 191/550 (34%), Gaps = 27/550 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGV 255 S+ + + A +++ ++ I+GY Sbjct: 316 EKASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPSILRSE 375 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRI 311 + ++ ++ + + + ++ Sbjct: 376 HHSNEFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDALTHFVSVIAD 435 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE-------AGKSFCCLRIDNLEFMS 364 + + A D LT LPN + L +D + ++ Sbjct: 436 ISNIKASEEKLSHLAHHDALTNLPNRLLFSARLDHALTHREASEKIVMFHLDLDRFKHIN 495 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + L ++ + + L ++ G E +++ E + + + L Sbjct: 496 DSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAILVEELEHVSDAESIADRLVEA 555 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + + + L Q+ + + Sbjct: 556 MEQPFTLDGKDYFTTASIGLALAPDHGDDIDTLTKHADIALNQAKDSGRN-NFAFFQPEL 614 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 S + + L +R AL + L+ QP + G + ++ + GI+ P++F Sbjct: 615 SETVQEWIKLEPELRKALAENQFQLHYQPQVDSTGTAIVGAEALIRWHHPEMGIIPPNQF 674 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 LP+ + L + V+ + L+ L+ G R ++NL + ++N+ +++ Sbjct: 675 LPIAEEIGLMNKIGEWVMNTALEQLSFWRSRGLIGFRLAINLAGDQITKQNLPMVVMQAL 734 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + I + + LEI E + E + +QL + G +++DDFGTGY+ LK+L Sbjct: 735 EHFQIPAEMLELEILETFLMEHEEEATSTFKQLRELGVHLSLDDFGTGYSALSYLKKLPI 794 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +KID V+DI + D I +++ LA L+V AE VET+ Q+ L LQ Sbjct: 795 TKVKIDQSLVRDIPEDPNDEAIAKAVILLAHTLDLTVCAEGVETRAQREFLESENCDQLQ 854 Query: 718 GYLIGRPQPL 727 GYL +P Sbjct: 855 GYLFSKPIEA 864 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 8/145 (5%), Positives = 32/145 (22%), Gaps = 10/145 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYENDFIAGYLVPV 246 ++++ +Q + + + + + + I+G Sbjct: 180 IVLNRFSSQENLQHKERLLENITQAMPGVVYQYHLDDELKQSFTYIGPGIETISGITAEA 239 Query: 247 FFIIFTLGVGKLRYPFLNLTWA-----VSTLCLLNYNQNFLQGVETEYSLAFILAVLI-S 300 F+ ++ + WA ++ + + Sbjct: 240 AIEDFSEFWEQVHPDDRSGLWASIVHTGKHGLAWSHEFRVFHKNGQMHWVRGSALPSKLG 299 Query: 301 FSVCLL--YMVRIYHRSEWLNRRWH 323 LL ++ + + Sbjct: 300 SQEGLLWNGIILDITPEKASIEQLR 324 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 110/625 (17%), Positives = 217/625 (34%), Gaps = 33/625 (5%) Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM--I 190 + FT+ + N+L + Sbjct: 406 ATAAWHERGERFGWGASASLPLHLKDRVIGAFTLYAGEACAFDEAAQNLLLEMALDISFA 465 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIAGYLV 244 + + + E+R + +V + L + I G+ Sbjct: 466 LDRFADERERKIMQDDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDVNTGFERITGWRH 525 Query: 245 PVFFI-----IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + G R ++ + N F++ + + Sbjct: 526 DEVVGKTATELNLWGNPADRMRLVDALQSEGRCN--NLEATFVKKNGDIFHGLMSAEKVR 583 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGK 350 C+L + R + + A D LT LPN L Sbjct: 584 FKDVDCILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQL 643 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D+ + ++ G + + + R L ++E + L +L G E +L+L G Sbjct: 644 AIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPG-TD 702 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E + + L + + L + + + + L + Sbjct: 703 EAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQ 762 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + + + + + L+N +R AL + + L+ QP + G + +L Sbjct: 763 ASRND-FRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLR 821 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 + G+++P +F+P+ VL + ++ L +VNL + Sbjct: 822 WRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQ 881 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 N+ + R+ + P+ + LE+TE A + +++ + +L + G R++IDDFG Sbjct: 882 FRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFG 941 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+ + + +KID FV+DI + D IV +I +LA + + +AE VET Sbjct: 942 TGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETAS 1001 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q A L G +QGY + +P P Sbjct: 1002 QLAFLRLQGCDEVQGYYVSKPLPKD 1026 Score = 58.8 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 27/290 (9%), Positives = 68/290 (23%), Gaps = 20/290 (6%) Query: 52 MLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQ-------------TFVVL 98 M L + ++ G Q+ + + Sbjct: 18 MRPALVGIVVFLLAGLVAGGLVYRSEQHRRQLAQSRALAMAADHAQSLQQNLQQALGPAQ 77 Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 + R WR S+ Q + V + + + + + + +T + Sbjct: 78 FEQVVARGYDYVLWRIDPASQQR-QIIAQSAKVPLDAVDFELKVPNAKWTLSVAPTTGWA 136 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 D + V L +LF+ +L Y+ R+ + Q+ + +R + Sbjct: 137 DPQGLSLKVALAALFSVLLAYSAKQAGAARVRAN--ELQVDVNAQAVELVALNQRLQSTL 194 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + + Y + + L V + A + Sbjct: 195 DALPDLLFETDMDGRYLAYHSPRSELLGKTLHRVLPVAVADICLAAVHEANAVGYSHGKQ 254 Query: 279 QNFLQGVETEYSLAFILAV---LISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + L + + + R + + Sbjct: 255 IQLALPDG-AHWFELSASRKPGLPGDAPTFIVLSRDITERKKAEIKIERL 303 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 105/596 (17%), Positives = 209/596 (35%), Gaps = 28/596 (4%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 A + + + +L + + + E R T+ Sbjct: 354 RVQAEVWREMGKYVLAVLAVALLLLIWNWLLRRQVAHKTQSLTLALDELAESEGRFRTIF 413 Query: 219 WLAALSVLLLL------LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL-----TW 267 ++ + L + G I P+ Sbjct: 414 DHVNDAIFIHRADTGRLLMVNQRMRDMYGMGDLPVDRIDVGMCSAGVSPYGAAEAQVWLR 473 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQ 325 A + ++ + + + + + + + LL +VR + R Sbjct: 474 AAAAGQPQQFDWHARRLDGSLFWVEVSMRLARFSDGQNRLLVVVRDITERKNAQDRLEFM 533 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN L+ + + L +D + ++ G ++ Sbjct: 534 AHHDPLTELPNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVNDSLGHAAGDRLLK 593 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 + L ++E++ + +L G E ++VL+ + + + + I + Sbjct: 594 DVAWRLRQCVRESDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKSVAPPITIEGQEVT 653 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 F + L+ + + ++ + L + Sbjct: 654 STLSMGIAMFPEDGHDFDTLMKKADAAMYHAKESGR-STYRFFAARMNADAVAHLALRSG 712 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 + AL++G+ LY QP + G + ++ + G+++P +F+P+ L Sbjct: 713 LHRALERGEFQLYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEFIPVAEDSGLIVPM 772 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + A +VNL L + ++ + + ++P ++ LE+ Sbjct: 773 GDWVLRQACRQAALWQAGGHALTMAVNLSALQFRRGDLERAVREALEESGLAPHSLELEL 832 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + E+ M +L G +++IDDFGTGY++ LKR D +KID FV+D+ Sbjct: 833 TESIMIQDHEAVMDMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVDKLKIDQSFVRDVH 892 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 T+T +A I ++I +A + L V+AE VE + L G QG+L GRP Sbjct: 893 TDTDNAAITQAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQGFLYGRPMTA 948 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 94/553 (16%), Positives = 198/553 (35%), Gaps = 31/553 (5%) Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVG 256 K A + ++ ++++ ++ I GY Sbjct: 515 RQQEEDLKLADIVYQNSSEAMMITDSKNEIIAINPALSEITGYSSSELIGKNPNVFSSGK 574 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYH 313 + + + + + EY ++ + + + + Sbjct: 575 QNPEFYQLMWEEIKLTGTWQGEIWNTKKNGKEYPEWLSISTIYDDYGNVFRRIALFSDIT 634 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + + QA D LT LPN EQ + + +DN + ++ Sbjct: 635 EKKKKDALILRQAKYDSLTNLPNRIMFIDRLEQEIKVSHRKNQKFALIFIDLDNFKKIND 694 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + + + + ++E + + +L G E ++LS ++ + + Sbjct: 695 TRGHVYGDALLIEAGKRITHCIREVDTVARLGGDEFTILLSDIADIHNVESICQKVLQTL 754 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S + + + + + LL + + Sbjct: 755 SEPFFISKMYTYISASLGVTIYPNDASSTLELLKNADQAMYLAKNLGRNR-FCYFTASMQ 813 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 + + L+N +R A+ L ++ QPI + + +L G+++P +F+ Sbjct: 814 EEALDHLELINDLRKAISLNQLEVFYQPIVELQTGVIRKAEALLRWKHPVRGMVSPAEFI 873 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRI--IRL 596 PL + L V + ++ + T + SVN P+ + ++ + Sbjct: 874 PLAEESGLIIEIGDWVFKQTVQHINTCKDQLGLDIQISVNKSPVQFRES--IDQLDWLAY 931 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + +++EITE +N S+M + + G +++DDFGTGY++ LK+ Sbjct: 932 LAENQLPGENIVIEITEGLLMNNNTSTMERLSKFRSAGIGLSMDDFGTGYSSLSYLKKFA 991 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F ++I + D ++ +I +A+ L V+AE +ET++Q LL G Y Sbjct: 992 LDYLKIDQSFTRNIAPGSEDMILSEAIITMAQKLGLKVIAEGIETKEQMELLIGAGCDYG 1051 Query: 717 QGYLIGRPQPLAD 729 QGY RP P D Sbjct: 1052 QGYYFSRPIPAED 1064 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/208 (9%), Positives = 50/208 (24%), Gaps = 14/208 (6%) Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 L+ IG +++L+ +F L +ST + L + Sbjct: 315 LIVSIGFSSALFLIVLYFIIGLHLSTIRSINSLTKVTGKFYGGDLDARVTLDTHDELNNI 374 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN------DFIAGYL 243 + + ++ + R + + + + + Y + Sbjct: 375 ALGFNEMATSFQNLMIDKEEISSRLRAIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKE 434 Query: 244 VPVFF-----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI---L 295 + + LG + + A++ + + Y L L Sbjct: 435 EDMLNTPSSNLAELLGDEIAHHCLDSDKAALAQDSPHVSFETIPRSNAKPYILEITKVKL 494 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 V L+ + + Sbjct: 495 KNAQGEVVGLIGISKDITNKRQQEEDLK 522 >UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=2 Tax=Cyanobacteria RepID=B0C4Z3_ACAM1 Length = 754 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 118/607 (19%), Positives = 216/607 (35%), Gaps = 32/607 (5%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 I+ + + D TV L L M + E Sbjct: 111 IAKPWDETDLGLTVKAALRSHLQDEQLIGQNRTLRAMNAQLQGEIDERQLVQQKLQESET 170 Query: 213 RAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPVFFIIFTLGVGK----LRYPF 262 R ++ V LL + + GY V F L + R+ Sbjct: 171 RLESILNSLDDVVWSAAVEEFQLLYLNPAAEAVHGYPVSSFLSNPDLWLEVVHPADRHQM 230 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLN 319 ++ + LN L+ L V+ L ++ + Sbjct: 231 IHFFDQLLVAGSLNIEYRILRPDGEIRWLKNRGHVITGDQGRPHRLDGIIYDITEQKRAQ 290 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP-----EQEA----GKSFCCLRIDNLEFMSRHYGLM 370 + A D LT LPN + + Q + + +D + ++ G + Sbjct: 291 AQLIHDAFHDELTGLPNRNLMMERISQSLKRQHRTSDYQFALLFIDLDRFKIINDSLGHI 350 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIH 427 + + +I L ++ ++ + +L G E ++L G + H+ + Sbjct: 351 VGDQLLVAIAHLLENCVRTSDTVARLGGDEFTILLDGIQGIEDAIHVAERILETLKSPFQ 410 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + G + LL ++ + + QT Sbjct: 411 VGEHSVFTGSSIGIAYNSVQYDDPTLLLRDADIAMYRAKSLGKG-CFVVFSPEMHAQTLS 469 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L +R+A+D+ + +LY QPI + + + ++ D G++ P +F+PL + Sbjct: 470 LLKLERDLRSAVDRQEFVLYYQPIIDLQSGDLTDVEVLVRWQHPDRGLVMPSEFIPLAEE 529 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L VL+ + L + +FSVNL L N + R+ + Sbjct: 530 TGLIVEIGQWVLQEACQTLRDYQQQFASATELKFSVNLSSEQLQDPNFIQTVDRVLSQSG 589 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + + LE+TE S+ E + ++QL I++DDFGTGY++ L R D +K Sbjct: 590 LDGRYLKLELTESMLMSHEEKHIKTLQQLRDRSITISLDDFGTGYSSLSYLYRFPLDTLK 649 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV +++ DA IV +I LA+ ++ V+AE +ET+++ L KLG + QGY Sbjct: 650 IDQSFVSRMISEPKDAEIVNTIISLARTLNMDVIAEGIETEEEVLHLKKLGCERGQGYWF 709 Query: 722 GRPQPLA 728 P Sbjct: 710 SPPMSQE 716 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 108/630 (17%), Positives = 222/630 (35%), Gaps = 38/630 (6%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR-------- 188 + ++ I+ + + + LLSL T Y R Sbjct: 152 ALYLGIIACLSFLGFAIALWLANVSSNRLSQRLLSLETTAHNIISNGNYSLRAQKVENDT 211 Query: 189 ---MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIA 240 + + + +++ E++ ++ + + + L + E I Sbjct: 212 ISNVTTNFNQMLDFFQQQDTQLRDSEEKFRLINETSKVGIFQLDINGTCVYANTELSLIT 271 Query: 241 GYLV-PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 G V + + + + W V + + N +A + +L Sbjct: 272 GLPVNEILESNWLTAIHPEDRSTVEEQWQVMLDNNQSLDLNCRLKTPQTKFIAAYVRLLR 331 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 + + + + ++ A D LT L N R E ++ Sbjct: 332 RSDGRLIGYIGAINDVSEIKNAQTQFEEMAYYDMLTGLANRRLFRNRLEHVVSNLKKEQS 391 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + +D + ++ G ++ + L ++ ++ + +L E ++L G Sbjct: 392 SLGLILVDLDRFKSVNDAMGHDAGDKLLKIVAGRLQQCVRASDTVARLSSDEFAIILPGI 451 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + H+ + + + N T + N + ++ + Sbjct: 452 KNSRTTAHVAEKVLTAIQQPVLINETEQRLTASIGIAIAPQNGTDAKTIIKNADLALFHA 511 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEI 522 + ++ Q +V L + ++ A+ D L QP + G++ + Sbjct: 512 KDNGRN-NYQFFTVEMNIQLIDRVALTHDLKQAVKNSDFTLVYQPKICLKQGNLVGFEAL 570 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KKGPRFSVNL 579 + G + P +F+P+ Q L V+ + + L T + +VNL Sbjct: 571 IRWNHKIRGAVGPTEFIPVAEQTGLIIPLGRWVITTACEQLRTMYDEEIVNDSVSMAVNL 630 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 +++ I + I P +E+TE N ++++ +E L + G +I+I Sbjct: 631 SAHQFQDEHLVDFIRDRINTFDIKPGQFEIELTESVLMENFDNAIEKLEALRQLGIQISI 690 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL + +K+D FV DI + D I ++ +A + +VVAE V Sbjct: 691 DDFGTGYSSLGYLKRLPVNTVKVDRSFVTDIPNDKSDMEITSAVIAMAHNLNYTVVAEGV 750 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET+QQ L G Y QGY +P P + Sbjct: 751 ETEQQLQFLEHSGCDYGQGYFFSKPLPDHE 780 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 112/711 (15%), Positives = 233/711 (32%), Gaps = 43/711 (6%) Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 I G + + + L + L L A++ + + + + R L Sbjct: 34 IGGAFFTLSGVVTLATLLLPSRPLHVLGVALVATAAIGIGIAVWLLPWGSWSRRAPLTLV 93 Query: 118 SRYVWQRLF----------WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVV 167 GL + + P VV Sbjct: 94 PVAFTLIAIHNYFARDEPARFGLFFIVTFTWIGLACPRWTSLPFVPLMIVAYV--TPLVV 151 Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 S+ TA+ + + + R E R +L A+ V + Sbjct: 152 TGTSIATALSAAVCTAPVCVLVAEAIAWVGARLRVAQRSLRESEVRFRSLVQHASDVVAV 211 Query: 228 -----LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----- 277 + GY + ++ + L Sbjct: 212 LGPDGTARYVSPAIQHVLGYRPEDLIGTSVFDRIH-PDDLPHARAQLTEIVLGRGAMPPT 270 Query: 278 NQNFLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + + + L+ ++ R + + QA DPLT LP Sbjct: 271 QFRYRRADGSWVYVEATATNLLDNPAVGGIVINARDISERKRFEKELVHQAYHDPLTGLP 330 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L++ + + + +DN + ++ G + + + LL + Sbjct: 331 NRVFLQRRLADSLAQAARERTRVALLFIDLDNFKLINDSLGHDAGDRVLSELGKRLLGCI 390 Query: 388 QENEKLYQLPGSELLLVL---SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRF 444 + + + G E ++++ G + + + + L + Sbjct: 391 RCGDMAARFGGDEFMVLINGTPGTDAALAAADRLAATLAEPFVVDGHELVITTSIGVALG 450 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + L+ ++ + + + Q +++ L +R L++G+ Sbjct: 451 GDPDDRPEDLIRNADAAMHRAKLLGKARRV-VFDPAMYAQAVERLALERDLRHGLERGEF 509 Query: 505 LLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +Y QP+ + + + ++ + G+++P +F+P+ + L VL + Sbjct: 510 QIYYQPVLDVRTRRPVEVEALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACR 569 Query: 562 WLATHPCDKKGPR---FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 LA SVNL ++ I ++ + P ++ LEITE Sbjct: 570 QLAAWRTAFPDCAPSAVSVNLSARQFRHPSLTADIAQILAETGLPPASLKLEITESVMMD 629 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + S++ + L + G ++A+DDFGTGY++ LKR D +KID F + + + D Sbjct: 630 DTASTLEALRDLKQLGVQLAVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQA 689 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V ++ A A L V E VET++Q L ++G +QG+L P P + Sbjct: 690 LVEAMIAAANALRLQVTVEGVETEEQLEFLERVGCDLVQGFLFAPPMPPDE 740 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 117/572 (20%), Positives = 207/572 (36%), Gaps = 36/572 (6%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVF 247 ++ E + L + +VL+L + Sbjct: 553 IRTDITERKKSAEAIERSEAKLHILFDSNSDAVLMLDMQGFFDCNKAALRLFGCATTEEL 612 Query: 248 FIIFTLGVGKLRYP--------FLNLTWAVSTLCLLNYNQNFLQGV-ETEYSLAFILAVL 298 + P + + + + +L+ + Sbjct: 613 CKHHPADMSPATQPNGIDSLTLANEYIATATRDGNAQFEWLHKRMDSGQSFPADVLLSSM 672 Query: 299 I-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AG 349 V L VR + A DPLT LPN R L + Sbjct: 673 KLDGRVVLQATVRDITERKKSESEIVRLAFYDPLTGLPNRRLLMDRLQHALTSNLRNDKH 732 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +DN + ++ G + + + + L ++E + + +L G E +++L Sbjct: 733 GAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARLGGDEFVVLLDNLS 792 Query: 410 TEGR-----LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + + + F + + LL + Sbjct: 793 HGHDNAGAHTKRVAEKILQALNLSYMLQGYEYHSSPSIGVALFCADASSPDELLKRADSA 852 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGY 519 QS A + +E + L + + AL+Q L+LY Q N + G Sbjct: 853 MYQSKAAGRN-TVRFYDERTQALLLARAELEHALHHALEQQQLMLYYQVQVNADYQPVGA 911 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSV 577 + +L G+++P +F+PL + + VLE L D +V Sbjct: 912 EVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASDVFKCDLVLAV 971 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ + + A ++ L ISP + LEITE + E+ + ++QL K G Sbjct: 972 NVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENIIATMQQLKKIGLNF 1031 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ +KRL D +KID FV+DI + D IVR+I +A++ L+++AE Sbjct: 1032 SMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQSMKLNIIAE 1091 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +ET+QQ+ LL G QGYL +P PL+D Sbjct: 1092 GIETEQQRRLLALKGCTNYQGYLFSKPVPLSD 1123 Score = 82.3 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 18/280 (6%), Positives = 52/280 (18%), Gaps = 12/280 (4%) Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 + + L + +VL A +I + Sbjct: 290 MLGASMPFYDSRWTLVVEQEAFEILWPMWVMFAEQLAMLLVLSAVSIWLYLRLQNRAIIH 349 Query: 117 TSRYVW------QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL 170 + + +R I + + + F+ Sbjct: 350 PLKQLQNAIEEIERTQDFTRPIEITSEDEFGELANAFNRMSHHLDRVYQNLEQRVTERTQ 409 Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 L ++ +R ++ + ++ V + Sbjct: 410 ELEILNQQIRANLLISRESQEKLAASEAHSKRIAEELQYQKFALDEHAIVSVTDVTGTIT 469 Query: 231 CTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 I+ Y + F + A++ + N + Sbjct: 470 DVNERFCQISQYSREELIGKNHKMLNSGWHPKGFFKAMYRAITRGQVWNDEVCNRAKDGS 529 Query: 288 EYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHL 324 Y L + + + + + Sbjct: 530 LYWLDMTVVPFMDECGKPYKYIGIRTDITERKKSAEAIER 569 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 117/624 (18%), Positives = 230/624 (36%), Gaps = 31/624 (4%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 I + + + L + ++L + + + + T++ Sbjct: 263 ICSVLLMPLLYQQSYLGGIALHQCDRQREWTENEITLVKTIAHHCAIAIHHTQLYQQAQI 322 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFII 250 ++ +E+R L AA +++L + GY Sbjct: 323 ELAQRQQIETALRQREQRFKALIENAADIIIILDAQFCFSYLSPSIKKVLGYSCEELIGQ 382 Query: 251 FTLGVGKLRYPFLNLTWAVS-----TLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 L + F+ + + +F T + ++ L++ Sbjct: 383 SILTLIHEDEEFVFRETLNKVIENPEISVSEVEYHFRTRHHTWSIMEGVVKNLLNEPGVE 442 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCC 354 ++ + + + AL D LT LPN L Q + Sbjct: 443 GIVLNFHEITQRKLAEAQLRHDALHDSLTGLPNRALLMDRLTQAINREKGRFYTHFAVLF 502 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G ++ + S L + + + + +L G E +++L G+ Sbjct: 503 LDVDRFKLLNDSLGHLVGDQLLISFANCLKKIRRFTDTIARLGGDEFVILLEDLSEVGQA 562 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + S ++ + + + + E +L + + Sbjct: 563 IKVAQRINEILSSSFLIDDQEIFITASIGIAFSNSSYEHPSQILRDADTAMYYAKNNGRG 622 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 + + KQ+ L N +R A+++ +L++Y QPI N G + ++ Sbjct: 623 K-YQVFDSSMHIHALKQLQLENDLRRAIERDELVVYYQPIICLKNGTLIGVEALVRWQHP 681 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLL 585 G+++P +F+P+ + L D VL + + + SVNL Sbjct: 682 QEGMISPAEFIPIAEETGLIIELDQWVLNTACQQMRFWQEKYSDFKSITLSVNLSGRQFS 741 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q ++ I + + + Q + LEITE N S+ +EQL + + +DDFGTG Sbjct: 742 QPDLIKNIDNILTQNKLEKQYLKLEITETVLIENPNSAAEMLEQLIERKVTVCLDDFGTG 801 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L R D++KID FV +I TNT ++ I+R+I LA+ + V+AE +ET+QQ+ Sbjct: 802 YSSLGYLHRFPLDVLKIDRSFVSNIETNTSNSTIIRTIITLARELEIEVIAEGIETEQQR 861 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L LG Y QGY P + Sbjct: 862 EFLQSLGCHYGQGYWFSPPVDGRE 885 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 690 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 121/605 (20%), Positives = 227/605 (37%), Gaps = 35/605 (5%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI---VSPHFAQILWRRDIAPSLGKEKR 213 + T L + ++I I +R EKR Sbjct: 529 WSQPILSSTDQVLGTFAIYHHQAYTPTESDIQLIEQSARLASIAIERKRSEEALHYSEKR 588 Query: 214 AFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNL 265 ++ A V ++ + + GY+ + + V + + + Sbjct: 589 FRDVNDAAGEYVWEMGTDMVYTYVSNRSVDVKGYVPDELLGHTPMEFMPVEDIPHVREIV 648 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRW 322 A+++ + T L + Sbjct: 649 NRAIASNTSFKLQHRDITKSGTLLWEEVNGVPFFDEHGELMGLRGTGMNITDRKRAEEEI 708 Query: 323 HLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A DPLT LPN R L + + + +DN + ++ G + Sbjct: 709 KSLAFYDPLTHLPNRRLLVDRLQHALASSTRSGREGALLFIDLDNFKTLNDTLGHDIGDL 768 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN---SRQI 426 ++ + L ++E + + +L G E +++L E + + + + ++ Sbjct: 769 LLQQVALRLASCVREGDTVARLGGDEFVVMLEELSEQTLEAAAQTESIGEKILLTLNQPY 828 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 F ++++ LL Q Q+ L + + Sbjct: 829 LLAAHEYRNSPSIGATLFGNKPQSIEELLKQADIAMYQAKKAGRN-TLRFFDPQMQETVI 887 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + LL + AL+ LY Q E G + ++ + + G++ P+ F+PL + Sbjct: 888 ARALLERELSKALENDQFQLYYQIQMTDLNEPFGAEALIRWIHPERGLIPPNHFIPLAEE 947 Query: 545 FNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L L VL++ + + +VN+ + Q + +I + +R+ I Sbjct: 948 VGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNVSARSFFQDDFVTQIQTVLQRHAI 1007 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 +P+ + LEITE ++ E ++ + L K G + A+DDFGTGY++ + LKRL D +KI Sbjct: 1008 NPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKI 1067 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+DI T++ D IV +I +A + +L V+AE VET+QQ+ LL + G QGYL G Sbjct: 1068 DQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETEQQRQLLIESGCSQYQGYLFG 1127 Query: 723 RPQPL 727 +P P+ Sbjct: 1128 KPAPI 1132 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 690 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 101/544 (18%), Positives = 214/544 (39%), Gaps = 27/544 (4%) Query: 211 EKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPF 262 A T+ A +++ +L + + GY R + Sbjct: 38 LSIAHTIIQEADEGIIVTDSEGHILLANPAFETVTGYTQEEVLGKKPNILRSGLHDRKFY 97 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLN 319 N+ + + + + + + + + + + Sbjct: 98 ENMWETIRDHGVWKGEIWNKRKNGELFVEWLTIKAVYDVAGNPTHYVAIFSDVTQHKRTM 157 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMM 371 + + D LT +PN + + + + L +D ++++ G Sbjct: 158 EQLARLSNYDLLTNVPNRQLFTKRLQHLLDTARRYNQQLAILFLDLDRFKYINDELGHYS 217 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 ++ + L L++ + L ++ G E +++L + + + Sbjct: 218 GDILLQKVANRLKKLLRTKDTLARIGGDEFVVILPKLKDIQEAVSIAEQIIESLQAPFLL 277 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 ++ + + + + + + LL + +++ + + Q+ + Sbjct: 278 HHKDIYISASIGISVYPNDGDDGEMLLRRADRAMQKAKESGRNR-FELYTAKLDYQS-EV 335 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 V L N +R A+++ +L + QPI N K+ E + ++ + + G ++P +F+PL + Sbjct: 336 VTLENYLRKAIERNELFVCYQPIVNIKTKKIEALEALMRWKQPNIGFVSPAQFIPLAEET 395 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L + E + + +N+ + Q + ++ + K++ + P+ Sbjct: 396 GLIVPMTKWLFEQACVHIKAIHQFAPHVKIGINISAVHFQQDDFVQQLSTIVKKHDVHPR 455 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 LE+TE NAE S+ + QL + GF++AIDDFGTG+++ L R DI+KID Sbjct: 456 FFKLELTESTIMPNAEESVQKLVQLKQCGFKLAIDDFGTGFSSLSYLHRFPIDILKIDQS 515 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F++ + + DA IV +I +A LSVVAE VET+QQ L+K QGY I +P Sbjct: 516 FIRRLSLYSDDATIVSTIIMMAHHLHLSVVAEGVETEQQYEFLNKQQCDMAQGYYIAKPM 575 Query: 726 PLAD 729 P+ + Sbjct: 576 PIDE 579 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 690 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 122/683 (17%), Positives = 231/683 (33%), Gaps = 48/683 (7%) Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS-----RYVWQRLFWLGLVTPIGIKCS 139 QT + +V R R G T + Q W + I Sbjct: 91 QTLQDASTLLDLVSPVMLDARHLGWVRIGMGRTQFNTQVERMLQSGLWYLASSIALIGLF 150 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + G +F L + D + + T + R+ + Sbjct: 151 ASITGLYFTRRLNAISKVAD--------AVQAGDTGRRVDIKGSDEAARLAQEFNAMLDT 202 Query: 200 WRRDIAPSLGKEKRAFTLSWL--AALSVLL-----LLLCTPYENDFIAGYLVPVFFIIFT 252 ++ + + + + + +L + GYL Sbjct: 203 LQQREQELVQSRDALRIAATAFESNDVMFVCDADWRILQVNSAFQRVTGYLPEEAIGKAP 262 Query: 253 L----GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 + + + + ++ + + Y + + Sbjct: 263 RDLMGSGIQTQEFYEVMNESIRSNGSWQGEVWDRRKNGETYPAWTTITAVRSESGDVTHY 322 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRI 357 + + + + D LT+LPN R L E + + + Sbjct: 323 VANLSDFSARKAAENEIKTLVYFDSLTMLPNRRMLMGRLETAMHAALSTGHLGALLFVDL 382 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEG 412 D+ + ++ G ++ + L ++E + + +L G E +++L G E Sbjct: 383 DDFKTLNDTLGHHQGDILLQQVANRLQSCVREADTVARLGGDEFVVMLEGLSKDVAEAST 442 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + + ++ F QE+L L + Q+ A Sbjct: 443 QAEAVAGKVMQALNQPYDLGTLTRSSTPSVGITVFGKQQESLDEPLKRADLAMYQAKAAG 502 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLK 527 + + T + L +RTAL++ +LY QP + G + ++ Sbjct: 503 RNTS-RLFDPKTQAAVTLRADLEAALRTALEEEQFVLYLQPQISEDVRVTGAEALIRWQH 561 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLL 585 G++ P +F+ + + VL + K LA +VN+ Sbjct: 562 PTRGLVMPGEFIAVAEDCGMIVPIGNWVLNTACKQLALWATQPAFAHMTIAVNVSAKQFH 621 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + +++ R+ + +EITE +N + + +E+L G A+DDFGTG Sbjct: 622 QHDFVEQVLDALSRHGAQASGLKIEITESMLIANVDDVIVRMEELQHHGVGFAMDDFGTG 681 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL D++KID FV+D++ +T DA I I LA + LSV+AE VET +Q Sbjct: 682 YSSLTYLKRLPLDVLKIDQSFVRDVLVDTNDAAIANMIVALANSMGLSVIAEGVETVEQM 741 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L + G QGYL RP P+ Sbjct: 742 QYLARHGCHAYQGYLFSRPVPVE 764 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 690 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 114/673 (16%), Positives = 209/673 (31%), Gaps = 34/673 (5%) Query: 86 TAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI---GIKCSMYL 142 ++ + V RW + L L + Sbjct: 132 LGALIQALPDAVFLKDGEGRWLVTNGAAQALFGLAERDWFGRTDLELGSEDPARAEVHAV 191 Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 + + + + +F A I + IV R Sbjct: 192 CARNDELVWQQGGMRQMLEIVEDGQGRRLVFEATRIPLFDSVGQRKGIVVVGRDITERRA 251 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIF---TLG 254 T+ + + I GY Sbjct: 252 AEERLRQA----ATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAEAEVIGCHTRILQS 307 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRI 311 + + ++ + Y + + + + Sbjct: 308 GRHGADYYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSNYVAVFSD 367 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + + A DPLT LPN L + L +D + + Sbjct: 368 ISQIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLDLDGFKNV 427 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G ++ I L ++ + + G E +VL + + L + Sbjct: 428 NDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSEVAEHLIA 487 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + G + F + + L+ +S A E Sbjct: 488 EIARPLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSKALGRN-TFSFHHED 546 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 ++ +++ L + +R AL+QG L+ QP + G + +L + G+++P + Sbjct: 547 MAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGAEALLRWRDPERGLVSPAE 606 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L L VLE + R +VN+ + + + R+ Sbjct: 607 FVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNVAAPQIERGGFDQAVARV 666 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P A+ +EITE +AE++ + L G +AIDDFGTGY++ LK L Sbjct: 667 LSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVAIDDFGTGYSSLAYLKNLA 726 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID FV+D+ + + I R+I + ++ VVAE VE Q A L G Sbjct: 727 VQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGVEEPAQAAFLVSEGCTLA 786 Query: 717 QGYLIGRPQPLAD 729 QGYL +P P A+ Sbjct: 787 QGYLFAKPMPGAE 799 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 12/149 (8%), Positives = 22/149 (14%), Gaps = 16/149 (10%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-------------ENDFIAG 241 ++ E+R L +V L + G Sbjct: 113 LDITDRKQAERRVRESEERLGALIQALPDAVFLKDGEGRWLVTNGAAQALFGLAERDWFG 172 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 N + + G L Sbjct: 173 RTDLELGSEDPARAEVHAVCARNDELVWQQGGMRQMLEIVEDGQGRRLVFEATRIPLFDS 232 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQAL 327 ++ + R R A Sbjct: 233 VGQRKGIVVVGRDITERRAAEERLRQAAT 261 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 97/603 (16%), Positives = 186/603 (30%), Gaps = 28/603 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 D VVD + R I + R Sbjct: 469 VSIRRAFDQTLYHRDGRVLVVDYAFRPILEGGQVRGGVFSCRDITGRKRIEESLRLHAQV 528 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFL 263 + +L + + GY + + + Sbjct: 529 FDTATEGVMIADAR------GRILSVNRAFEQVTGYSAEEVVGRNPSILSSGRQDKAFYR 582 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNR 320 + + + + + Y ++ + + + + + + Sbjct: 583 RMWDTIKGEGIWSGEIWNRRKDGEIYPEWLTISSIAGPNGEASHFVAVFSDITAQKRSEQ 642 Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 A DPLT L N E + +D ++ G Sbjct: 643 EIDFLANHDPLTGLANRNLFEDRLAHAISMAGRNGQHVGLLLVDLDRFRLINDGMGHGPG 702 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWN 429 +R R L +++++ + +L G E ++L G + + Sbjct: 703 DALLRETGRRLGHCVRDSDTVARLGGDEFGIILEGLADAADAGMQAERILEAMRAPLRLG 762 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 L F + LL + ++ ++ Sbjct: 763 GQELFCTVSIGIAVFPADGTDAATLLRHADTAMALAKREGRN-NFQFYTHALTEAVFSRL 821 Query: 490 LLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 + +R AL++ +L L+ QPI + + ++ + G+++P F+P+ Q + Sbjct: 822 NIETGLRHALERDELRLHYQPILDAASGRIAAMESLMRWQHPERGLVSPGVFIPVAEQSD 881 Query: 547 LSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L L S + SVN+ Q ++ + + + PQ Sbjct: 882 LILALGRWALVSACAQVRAWSDAGLEPVPVSVNIPACHFRQPGFVEEVLGVVRETGVQPQ 941 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 ++I+E+TE + I +L G +AIDDFGTGY++ L+R + +K+D Sbjct: 942 SLIIELTESALMEPVSLAEERIRRLRDTGVVVAIDDFGTGYSSLGYLQRFHVNYLKVDRS 1001 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV + + I ++ ++ + L VVAE VETQ Q L G +QGYL GRP Sbjct: 1002 FVSGLPGDENARAITEAVIGVSHSLGLQVVAEGVETQAQLDHLRATGCDKVQGYLTGRPV 1061 Query: 726 PLA 728 Sbjct: 1062 TAE 1064 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 99/570 (17%), Positives = 195/570 (34%), Gaps = 36/570 (6%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFI 249 +R A + ++R A + L I GY Sbjct: 294 ADISERKRTEAALMETKERYALAIQGANDGIWDWNLVNNEIYFSSRWKTILGYSESEVDN 353 Query: 250 IFTLGVGKLRYPFLNL------TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 ++ L + + + Sbjct: 354 CLEEWFSRIHPQDLERVKLKLNLHQQGQSSHFEEEYRLRHKNGKYRWVLSRGIAVRNSEG 413 Query: 304 ---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKS 351 + + + AL DPLT LPN Q + Sbjct: 414 KAYRMAGSLSDISEQRLAQEQLMHDALHDPLTGLPNRTLFMDRLRQVIHHARRHRNYNFA 473 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + + + ++ ++ + +L G E +++L Sbjct: 474 VLFVDLDRFKVINDSLGHLAGDTLLIELAHRFQIGLRPDDTVARLGGDEFVILLDDLLEV 533 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + N + D + + L ++ A Sbjct: 534 EESIRIAHRIQTLVQQPFIINGQTVFTSASIGIAPKDTHHHKPEHYLRNADIAMYRAKAA 593 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILAR 525 + ++ ++ L +R AL++ +L L QPI + G++ ++ Sbjct: 594 GGSRHV-LFTSVMHTSALVRLQLETDLRQALERQELRLQYQPILCLNTDQIVGFEALVRW 652 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPL 582 G++ P F+ + + L VL+ + + SVNL Sbjct: 653 QHPRDGLIAPGHFITVAEETGLIVPIGEWVLQEACRQMQCWHTQFGQVLPLMVSVNLSSK 712 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L Q ++ ++ R+ + PQ + LEITE N E + + +L + ++++DDF Sbjct: 713 QLSQPDLLQQVDRMLAETGLRPQQLKLEITESMILDNTEVARQTLLKLKERQIQLSMDDF 772 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L RL D++KID F+ ++ + +VR+I +A + + V+AE +ET+ Sbjct: 773 GTGYSSLNYLHRLPIDLLKIDRSFIHEMDSGEESRELVRAIISIAHSLKMQVIAEGIETR 832 Query: 703 QQQALLHKLGVQYLQGYLIGRPQ---PLAD 729 Q LH+LG ++ QGYL P P AD Sbjct: 833 SQLEQLHELGCEFGQGYLFSTPLDPEPAAD 862 Score = 48.4 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 13/190 (6%), Positives = 38/190 (20%), Gaps = 14/190 (7%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 YL+ L + G + + L L F +V+ Sbjct: 123 YLIPLGLTSLLDAPIWVGGTMVGVVCHEHMGLKRYWLPEEQSFAGAIADMVALALEARDR 182 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFTL-- 253 ++ A ++ + + + + + Sbjct: 183 QQAEAELQKTNQQLRNILESLTSGFFSLNETAEFTYINPQAEPLLQHSRAELLGHNLWQF 242 Query: 254 -GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIY 312 + F A++ + + + + L + + L Sbjct: 243 FPALRDSSFFPYYQEAITDQVTVKFEDYYPRLN---RWLEIHICPFQTGVAVYLA---DI 296 Query: 313 HRSEWLNRRW 322 + Sbjct: 297 SERKRTEAAL 306 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 101/593 (17%), Positives = 207/593 (34%), Gaps = 30/593 (5%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK-RAFTLSWLA 221 + + + + + + R I A++ + G + ++ + Sbjct: 104 VRWIHNRVCAIADETGTVIRIDGIARDITQRKQAEVQLCPENDLLQGIMQTSIAAITVVD 163 Query: 222 ALSVLLLLLCTPYENDFIA-------GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 ++ + + Y P + I G V+ + Sbjct: 164 TQGNIIFANARSQQVLGLTQSELVERRYNCPTWQITDFQGGPFPEEQLPFQQVMVTGQPV 223 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + T L+ A L +++ V + + + AL D L Sbjct: 224 FDVQHAIEWADGTRKYLSVNGAPLKDADGVITHIVFSVTDISHHKHVEEQLCHDALHDNL 283 Query: 332 TLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 T LPN + + L +D + ++ G + + + R Sbjct: 284 TRLPNRTLFMERVNHAIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQ 343 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGA 439 L ++ + + L G E ++L + + + + NN + Sbjct: 344 LEKCVRTTDTVAHLSGDEFTILLEDIKDIKDATRVAERIQATLKAPFNLNNHEVFTSASI 403 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 E + +L ++ + ++++ + + + L N +R AL Sbjct: 404 GIALSSTGYERSEDILRDADIAMYRAKELGKAR-HEIFDKIMHARALELLRLENDLRRAL 462 Query: 500 DQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 ++ + +Y QPI G++ ++ + G+++P +F+P+ L VL Sbjct: 463 ERQEFEVYYQPITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVL 522 Query: 557 ESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 + L + SVNL + + ++ +I + + + LEITE Sbjct: 523 HEACRQLRMWHTQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITE 582 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 NAE+ + QL ++++DDFGTGY++ L R + +KID FV + Sbjct: 583 SILMENAETVTKMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPK 642 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + I+R+I LA + + V+AE VET +Q L L + QGYL +P Sbjct: 643 NRNTEIIRTIITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPLT 695 Score = 63.1 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 8/129 (6%), Positives = 32/129 (24%), Gaps = 8/129 (6%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF----IIFTLGVG 256 ++ + W A+ + LL + I G + + + + Sbjct: 14 QKRHQLIPAILNSLDEVVWSAS-AQTYKLLYINQAAETILGRTLCELYDQPTLWELMIHP 72 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYH 313 R ++ ++ + + + + ++ + R Sbjct: 73 DDRQRVQQQFQSLGESGNQAVEYRIVRPDGEVRWIHNRVCAIADETGTVIRIDGIARDIT 132 Query: 314 RSEWLNRRW 322 + + + Sbjct: 133 QRKQAEVQL 141 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 108/604 (17%), Positives = 206/604 (34%), Gaps = 26/604 (4%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 S + + + L + V+ + + S A+ Sbjct: 479 SHSVATHEIHFDAVLVTPHGVRRRLALSARTLQVVGQGHYVTGSVQDVTSLRRAERELML 538 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLR 259 + F +L + I GY F Sbjct: 539 SAQVFEHGSEAVFITDASHR------ILRVNPAFEAITGYAAGEVLGLTPDFRCVSSPGG 592 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSE 316 + Y L+V+ + + + Sbjct: 593 TSISQRWELAEQTGRWQGEIVCRRRSGEHYYEWSALSVVRHANGSVLYFIGQFSDISAVK 652 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP-----EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 R A DPLT LPN L + + +D + ++ G + Sbjct: 653 AAEARALRLACFDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRFKNINDSLGHTL 712 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 ++ + R L+ ++ + + + G E +LVL G L+ + L S I Sbjct: 713 GDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILL 772 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + L + F + LL + + + + ++ Sbjct: 773 DGLDLRVTPSLGVAVFPRDGNDCDALLRHADAALYHAKSRGRN-TYRFFTREIDDRVSEY 831 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + + + +R+AL++G+ L+ QP + G + +L + G+++P +F+P+ + Sbjct: 832 LHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEET 891 Query: 546 NLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L + V+ + +VNL + + I + P Sbjct: 892 GLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSRS-VIEAIDEALADSGLDP 950 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + +E+TE + + + +E L G +A+DDFGTGY++ LKR D +KID Sbjct: 951 RWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDR 1010 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F++DI + + +IV +I +A + V+AE VET+ Q L + G +QGYL+ RP Sbjct: 1011 SFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRP 1070 Query: 725 QPLA 728 QP A Sbjct: 1071 QPAA 1074 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 103/593 (17%), Positives = 210/593 (35%), Gaps = 37/593 (6%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + + + + + I R A + L + Sbjct: 231 VIWISENARVVRGADGLPAYYEGTVVDITDRK-------RAEAALATQRAYFTQLFANSP 283 Query: 223 LSVLLLLL-----CTPYENDFIAGYLVPV---FFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 ++ L+ + + + GY F + + L N+ AV Sbjct: 284 QAIALIDMHRNIVDANKAFEALFGYRTADIQGFGMRAFIVPEHLLSECENMRCAVLAGKP 343 Query: 275 LNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + ++ I + + ++Y+ + + + QA D LT Sbjct: 344 VVRETVRRHCDGRLIPVSMIGFPIEIAGETQGIVYIYQDISERKAFEEQITHQAFHDALT 403 Query: 333 LLPNFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 LPN E+ + + + ++ + ++ G + + R L Sbjct: 404 GLPNRSLFADRLERALTRARRRGDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRL 463 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 ++ + + +L G E ++L +T+ + +V + + + Sbjct: 464 SGCVRSMDTVARLGGDEFAVILEEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPEASIG 523 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + LL ++ + + + + + + L +R AL+ Sbjct: 524 IVLHTRDYAAADDLLRDADIAMYRAKEQGRASMI--FDRKMHQEILEAISLETDLRQALE 581 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 G+LLL+ QPI + G++ ++ D G++ P +F+PL + L V++ Sbjct: 582 AGELLLHYQPIVDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVID 641 Query: 558 SLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 + L + SVN+ ++ + + ++ + P + LEITE Sbjct: 642 EACRQLRAWQLEMPEAADLSVSVNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITES 701 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 +AE + + +L G +IAIDDFGTGY++ L++L D +KID F+ + Sbjct: 702 VLMHDAEHTARELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDG 761 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 IV+SI LA++ L+V+AE VE Q L QG++ RP Sbjct: 762 ESQEIVKSIISLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSRPVEA 814 Score = 75.0 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 24/286 (8%), Positives = 58/286 (20%), Gaps = 32/286 (11%) Query: 94 TFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGS-FFDFPLK 152 F+ A+LR GT ++ + + D P + Sbjct: 20 VFLCSPNAALLRDADGTVLAANAAFEALFGVEIPEVVGLDLREVLRPVSSRPGRADRPDE 79 Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP------HFAQILWRRDIAP 206 + A F + + + M+ Sbjct: 80 DGEVWSLRGAAFLRETRWAAGEGDAADVRVSQFPVGMLGDRPITCMLFRDIASRLLAEDR 139 Query: 207 SLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY-----LVPVFFIIFTLGVG 256 E++ ++ A + L I G+ + F I Sbjct: 140 LRDAERKYRSIFENAVEGIFQTTPAGRYLEVNRTLARIYGFESVAEMREFFRDIRNQLYV 199 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 R + + + ++ + T ++ V+ V Sbjct: 200 DPRRRDDFVRELAAHDQVRDFESEIRKKDGTVIWISENARVVRGADGLPAYYEGTVVDIT 259 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDN 359 + Q Q + ++ + + Sbjct: 260 DRKRAEAALATQ-----------RAYFTQ-LFANSPQAIALIDMHR 293 >UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor, putative n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CE49_ACAM1 Length = 880 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 105/571 (18%), Positives = 192/571 (33%), Gaps = 38/571 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-------------YE 235 +I S RR E R + A + L + Sbjct: 289 LIRSYLIEITQHRRTEQQLRLSEARYAAAAKGANDGLWDWDLHGNTIYFSDRWKAMLGFS 348 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + I F I ++ L Sbjct: 349 EEEIGASPDEWFNRIHPQDQDRVTEDLSAHLR--GDTPQFECEYRILHSNGEYLWFKGRG 406 Query: 296 AVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 L + + + +A D +T LPN + Sbjct: 407 LALRNDQNQAFRIAGSQTDVTAYYSTRAQLEFKAQHDEMTQLPNRVLFMERLTHAFRMAK 466 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 +Q + L +D + ++ G + + + + L +++ + + + G E + Sbjct: 467 HQQSRLFAVLFLDLDRFKIINDSLGHRVGDQLLIEVSKRLQQCLRKQDTIARFGGDEFAI 526 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L E H+ + +I + + + + LL Sbjct: 527 LLDTVEDADEAIHVAQRILQALKAKISLEEHEVYTSASIGITVSSPDYQAPEELLQDSDT 586 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GE 517 ++ + + Q Q+ L ++ A+ +L L QPI + Sbjct: 587 AMYRAKKQGKN-CFEVFSSGMRAQVNSQLQLETDLQRAISNNELHLVYQPIVDLNTENIV 645 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPR 574 G++ +L + G++ P +F+P+ L D VL + +A Sbjct: 646 GFEALLRWNHPERGLVPPSEFIPVAEDAGLMVSIDWWVLTEACQQMAHWLNIYPGSTELT 705 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ LQ ++ + + + P + LEITE SNA + + L K G Sbjct: 706 INVNISAHQFLQSTFCEKVNAIIQETGMKPHHLKLEITEGVILSNAPNISEQLNNLKKLG 765 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +AIDDFGTGY++ L D++K+D FV + + IVR+I +L + ++ V Sbjct: 766 IHLAIDDFGTGYSSLSYLYAFPLDVLKVDYSFVSRMDQD-NGLAIVRTIVNLGQNLNMKV 824 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 VAE VET+ QQ L ++G ++ QGYL RP Sbjct: 825 VAEGVETKIQQEYLQEMGCEFAQGYLFSRPL 855 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 96/565 (16%), Positives = 194/565 (34%), Gaps = 26/565 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA--FTLSWLAALSVLLLLLCTPYENDF 238 M+ + R I A + A L+ + Y Sbjct: 134 MVRVWSLRNITERREADAYKAQLAAIVESSNDAIIVQDLNGIITSWNAGAEGLFGYRASE 193 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + G V + + ++ ++ ++ + Sbjct: 194 VIGSSVEILIPPDLREEEGDIMCLIKSGRRAD-----HFETVRWGKGRKPIDVSVTISAM 248 Query: 299 ISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + ++ +VR + + R A D LT LPN L Sbjct: 249 KDRAGNIIGASKIVRDITQRKESQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYS 308 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + ID + ++ G + ++++ + + +++ + + ++ G E +++LS Sbjct: 309 IRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADTVSRVGGDEFVVLLSR 368 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ET L S+ L + + N + L Sbjct: 369 IETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNGKDASSLTRNADAAMYS 428 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + E ++ +++ L + +R AL + ++ QP G + Sbjct: 429 AKGQGRNR-YQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQPQIELATGRVIGVEA 487 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLM 580 ++ + G+++P F+P+ L +L +VN+ Sbjct: 488 LMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQWHEHQGFQGTIAVNVS 547 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + Q + ++R+ P+ + LE+TE ES + + L G ++AID Sbjct: 548 AVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVVQKMGILESHGIKLAID 607 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L++ D +KID FV+D+ + I+R+I + ++ L V+AE VE Sbjct: 608 DFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVE 667 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ 725 T+ Q L + QGYL RP Sbjct: 668 TEAQARFLQDIECTESQGYLYARPM 692 >UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YKOW_BACSU Length = 800 Score = 689 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 121/754 (16%), Positives = 258/754 (34%), Gaps = 37/754 (4%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL---IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFI 58 + +LI I+++ F + + + + PL + + +++ L + + Sbjct: 45 LIGGSLIMGFGIWSMHFVGMMAVHMEMPMEYEFMPLMAAIGASVSGSFVSLYFVSRHILT 104 Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSF-LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 + V+ G ++ +S + ++ F V AI + + + L Sbjct: 105 YYRLLTGSVVLGASIASMHYIGMSAISRVMIIYEPILFTVSIIIAIAASFVSLKIFFDLA 164 Query: 118 SRYVWQRLF----WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 + + L +V IGI Y F ++ + + Sbjct: 165 VKKHSEHLIFYKGVSSIVMGIGISGMHYTGMLAATFHKDMAPPGSHMEVQTFHWSIFVTL 224 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT- 232 I +L + ++ E+R +L ++ +L L Sbjct: 225 IIFCIQTLLLFSSHADRKFIKQSE--------RIKDNEQRFQSLIVHNIDAIFILSLEGD 276 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 ++ ++ F L V + + L + ++ L Sbjct: 277 IISSNHAGEEMISKFGFSMHDWRNYTSLKVKRLFEQVKKDKQAMNSDSDLITEKGQFHLN 336 Query: 293 FILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA----LEQAPEQ 346 L + + + + + + H A D LT LPN R L + + Sbjct: 337 ITLIPVEVNQELDSIYVICKDMTKQYKAEKEIHRMAHYDSLTDLPNRRHAISHLTKVLNR 396 Query: 347 EAGK----SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 E L ++ + ++ G + ++ + L ++ +N + +L G E + Sbjct: 397 EHSLHYNTVVFFLDLNRFKVINDALGHNVGDQLLQFAAKRLSSVVPDNGFIARLGGDEFI 456 Query: 403 LVLSGPET-EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++L+ T G + + + + L + L+ + Sbjct: 457 IILTDANTGTGEADVLARKIIQKFKKPFKIQDHTLVTSVSIGIAISPKDGTDGLELMKKA 516 Query: 459 SWLAEQSCAHHHVLA-LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 + + + + T ++ +R A++ +L+ QP + + Sbjct: 517 DMAMYAAKE--RNKSKYRYYSFSIGNKETVKLNQEMVLREAIENDRFVLHYQPQFSVKKQ 574 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 + G + ++ + DG + P +F+ + + L +++ K Sbjct: 575 KMTGAEALIRLVTPDGQLRPPGEFIGVAEETGLIIDIGKWIIDEACKQARIWHDKGYDLS 634 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++N+ K++ I +Y + PQ + +E+TE N S + L + G Sbjct: 635 VAINISARQFQSKDLIPLIKDTLNKYQLPPQLLEVEVTESMTMDNLNHSKKVLSSLTELG 694 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 RI+IDDFGTG+++ LK +KID F+ DI T+ I +I + SL V Sbjct: 695 IRISIDDFGTGHSSLSYLKDFPIHRLKIDKSFIDDIQTHPKSEQITGAIIAMGHQLSLQV 754 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AE VE Q+ LL + G +LQG+ RP P Sbjct: 755 IAEGVENAAQKQLLFEKGCDHLQGFFFSRPIPPE 788 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 689 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 97/562 (17%), Positives = 195/562 (34%), Gaps = 29/562 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF- 248 I + A+ R + A + ++ + + GY + Sbjct: 586 ISARKQAEEELRLAHTVFEHSSEAM---LVTDADNNIITI---NPAFSEMTGYSLEEVIG 639 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--- 303 + + + L + T + EY+ + + S Sbjct: 640 KNPKILSSGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWLAINNIYSEDGKLF 699 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 + + + + QA D LT LPN R +Q + + + Sbjct: 700 RRVALFSDITEKKRADALIWNQANYDLLTQLPNRRLFSDRLQQEIKKSQHDHSQFALLFI 759 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + ++E + + +L G E ++++ + Sbjct: 760 DLDRFKEVNDTLGHSHGDYLLIEASHRIQRHLKETDTVGRLGGDEFTVIIANLPDPSVMT 819 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + + F + T LL ++ + Sbjct: 820 LIAQRVLDALAAPYDLEGEIVYLSASIGITVFPEDATTSAELLKNADQAMYEAKKNGRNR 879 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 M+ ++ ++ +R AL +Y QPI + + ++ + Sbjct: 880 -FSFFTPMMQAMAQARMRMMRDLRNALGLNQFTVYFQPIVDLSSQRIHKAEALIRWQHPE 938 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKN 588 G ++P +F+PL + L V + + + P + SVN P+ + Sbjct: 939 LGFISPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDDFQVSVNKSPVQFRDRT 998 Query: 589 IA-GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 A + +S +++EITE + + G ++AIDDFGTGY+ Sbjct: 999 QAHQDWMEYLSGLGLSGHNIVVEITEGLLLNADSGISDKLLHFRDAGMQVAIDDFGTGYS 1058 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ D +KID FV+++ D + +I +A L V+AE VET Q+ L Sbjct: 1059 SLSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAIATMAHKLDLRVIAEGVETTAQRDL 1118 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L ++G Y QGYL RP P + Sbjct: 1119 LAQIGCDYGQGYLFSRPVPAEE 1140 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 12/177 (6%), Positives = 32/177 (18%), Gaps = 13/177 (7%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 ++ +L L+ ++ ++ + S + Sbjct: 299 PVLLPYSRYIAPALGLLSLVGAIVLLWILLLRRSVKTKTAELANQHQRLQQIIDGTAAGT 358 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP--FLNLTWAVSTLCLLN 276 W + + GY L +P L A+ Sbjct: 359 WEWD--IRSGDCIVNPRWAEMLGYTPDELEPCTADSCRALCHPDDLEQLVQALEAHLRGE 416 Query: 277 -----YNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHL 324 +A V ++ + + + Sbjct: 417 TDYFASESRRRHKNGHWIWVADRGRVTRRSPQGEALTMSGTRLEITKLKLAETTLKQ 473 Score = 55.4 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 5/145 (3%), Positives = 26/145 (17%), Gaps = 11/145 (7%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT------PYENDFIAGYLVPVF 247 + ++ A + V + + + Sbjct: 458 RLEITKLKLAETTLKQAVEQQKMFIQQAPICVAMFDRDMRYLACSNQWQEEFGHQQGSLL 517 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-LQGVETEYSLAFILAVLISF---SV 303 + + + L ++ ++ +++ + Sbjct: 518 GLNHYDVHPDIPEKWRQAHQRALAGERLEEEEDLWIRADGQHLWTRWMITPWMDDSQTIQ 577 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALT 328 ++ + A T Sbjct: 578 GIIISSENISARKQAEEELR-LAHT 601 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 126/694 (18%), Positives = 233/694 (33%), Gaps = 36/694 (5%) Query: 56 LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG 115 L G V + + + + + + S R Sbjct: 162 LVQGGRGMVHRLPVFVPVKDGGESYWGTASIVLDIDSLLKAAGLQVRGPVLSYALRRLND 221 Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 + L P+ ++ ++ G + + S + V + + Sbjct: 222 HGQVEMISGDSNLFSHHPVMLEINLGAHGDWQLAGMPTSGWGRLVQQNDWVFWVG--VSL 279 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LL 230 L L Y R I R ++ ++ +L+ ++ Sbjct: 280 ALALATLAYVWLRTIQQLRRRDARMRLAT-----------SVFASSSEGILIANPNDEVI 328 Query: 231 CTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + GY V F + ++++S + Sbjct: 329 GINPAVTALTGYSVQELLGRPVSFLAPEQTVAESRRQASFSISEKGVWQGEALIKHKQGY 388 Query: 288 EYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF----RAL 340 + +A + + + + R H A TD LT LPN L Sbjct: 389 TFPVALTITTVTGEDGRVECYINTFSDISERKANEARIHDLAHTDTLTGLPNRMSLYSGL 448 Query: 341 EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 E+ L +DN + ++ G + + + R L+ + E + +L G E Sbjct: 449 EERLANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDE 508 Query: 401 LLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++VL P+ + + + ++ L G + LL Sbjct: 509 FVIVLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKN 568 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 + + + E + Q +++ + N +R A+ + + L+ QP + Sbjct: 569 IDTAMYAAKSSGKN-NFKFFTEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTG 627 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-P 573 G + ++ + G++ P+KF+ + + NL VL + ++ Sbjct: 628 RIIGMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAV 687 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 SVN+ L + + I L + I P + LEITE + E ++ +++L Sbjct: 688 CISVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNK 747 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +AIDDFGTGY++ LK L +KID FVKDI T+ DA I + LA+ L Sbjct: 748 GVALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLG 807 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +VAE VET+ Q L G QGY +P P Sbjct: 808 LVAEGVETEAQLEYLRAQGCDSAQGYYFSKPLPA 841 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 94/581 (16%), Positives = 208/581 (35%), Gaps = 54/581 (9%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYEND 237 + + R I A+ + + +++ Sbjct: 364 VWRMVRDISEKRVAEERMQLAAK-----------VFENTVEGIMITDADKRIRSVNRAFS 412 Query: 238 FIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 I G+ + + A++ + Y Sbjct: 413 QITGFGQQEVLGQKPDMLSSGRHDETFYEAMWSAINEHGSWQGELWNRRKNGEVYPEWLA 472 Query: 295 LAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQE 347 ++ + + + + + R A D LT LPN ++ + Sbjct: 473 ISAVRNAVGEITHYVAIFSDLSERKAADERIQFLAHFDVLTGLPNRAHIQDRVELAIQNA 532 Query: 348 AGKSFCCLRID------------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 D + ++ G ++ + + + E + + Sbjct: 533 TR--------DNERLALLLLDLDRFKTINESLGHSAGDALLQVLAERIRSTLLTGEVVAR 584 Query: 396 LPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 G E +++L G + + N + + F + + Sbjct: 585 QGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFNHSISITPSIGISVFPDDGRDFE 644 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ + + + ++ + + + + + +R ALD+ + +L+ QP Sbjct: 645 TLVRNADAAMYHAKSAGRN-SYKFYTADLNARAREILEIESQLRYALDRDEFVLHYQPQV 703 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + E G + ++ + G++ P +F+ + + + V++ + LA Sbjct: 704 DLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQ 763 Query: 570 KKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 +VNL L Q+++A + R + + + +E+TE + E++++ I+ Sbjct: 764 GLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTID 823 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 ++ G +++IDDFGTGY++ LKR +AD +KID FV+DI + D+ I R+I ++AK Sbjct: 824 RIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAK 883 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +++V+AE VET +Q L + G QGYL+ +P P + Sbjct: 884 NLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKE 924 Score = 64.6 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 24/220 (10%), Positives = 46/220 (20%), Gaps = 19/220 (8%) Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY 185 L ++ +GI S +L D F + Sbjct: 166 LGLSILLIVGILHSRFLKPMRTLTEQATHLAELHLDTPFLWERKDEIGRLGRHLEWTRAE 225 Query: 186 LTRMIVSPHF-------AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----P 233 L R+I R E + L W +++ L Sbjct: 226 LKRLIDELRAKTLALESDIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDAN 285 Query: 234 YENDFIAGYLVPVFFIIFTLG---VGKLRYPFLNLTWAVSTLCL-LNYNQNFLQGVETEY 289 + Y + + NL V + +++ Sbjct: 286 PAFLNLMCYSLDQLKLQNFWSLIAPESEGMERFNLDNKVLRFGYCDEFEASYINRFGNVV 345 Query: 290 SLAFILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQA 326 ++ + + + VR R L A Sbjct: 346 PVSVKTVAMRDSFGRINAVWRMVRDISEKRVAEERMQLAA 385 >UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0A6 Length = 1517 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 103/581 (17%), Positives = 197/581 (33%), Gaps = 25/581 (4%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 + L ++ RM + + + V Sbjct: 922 QWIWILDRGKVVERDHNAQPVRMTGTLKN-IHHLKEAEEQL----NLFKRSIENISEGVF 976 Query: 227 LL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + + G + + + + Sbjct: 977 ITNTQFKFISVNNAYCGYTGETRDQALASYMHFHLYPDAFTEEIKKTLKAKGNWSGEVES 1036 Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 ++ Y + + + + + + + A TDPLT LPN Sbjct: 1037 VRVNGERYEMELNIDAVHDDDGKISHFVGVFSDITSRKSTEKELLKLANTDPLTELPNRS 1096 Query: 339 ALEQA----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + + A + CL +DN + ++ G I+ I + L + ++ Y Sbjct: 1097 FFQASHQNLVRKGAQHTLLCLDMDNFKKINDSLGHQTGDILIKQIAKRLQRITGKSATCY 1156 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E +++ + H L SR N +G F + + Sbjct: 1157 RLGGDEFSVLMEDNADIHTVTHYAQNLLDTLSRPFIINKQEFVLGASIGIAFFPDDGTSP 1216 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 Q +L + + + ++ +Q+ + N IR + +Y QP Sbjct: 1217 QEMLKNADTAMYFAKNNGGN-SYQFFSGEMNQNAVRQLQIENLIRQGIKDDLFTVYYQPK 1275 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + + ++ GI++P +F+PL Q QVL Sbjct: 1276 VDIASGKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQIIEIGEQVLRKACADTKRWVN 1335 Query: 569 DKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R +VN+ ++ RI ++ +SP + EITE + E+ + + Sbjct: 1336 QGLFSGRVAVNISAKQFELPDLDDRINKILSDIGLSPLHLECEITEGTLMESPENGLQMM 1395 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L + G +A+DDFGTGY++ LKR + +KID F+ DI + +D + +I ++A Sbjct: 1396 TRLRERGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAFIDDIAKSNVDRHMAAAIINIA 1455 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE VE + Q +L + + LQG+L RP Sbjct: 1456 HNLGLKVVAEGVEEEAQLDILRRYDCEMLQGFLYSRPLNAE 1496 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 104/600 (17%), Positives = 205/600 (34%), Gaps = 29/600 (4%) Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 P + A I V + + + + I A+ R Sbjct: 268 PYDLELELVTARGIRKWVRTVCTPHIIDGRVLKLQGSFQDISDRKVAEDKMRLATLVFEN 327 Query: 210 KEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLT 266 + + + +L + GY + R + + Sbjct: 328 SSEAIMVVDAES------QILSVNPAFTEMTGYTAQEVVGKTPKILASGKQDRKFYEEMW 381 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + Y+ + + + + + +++ Sbjct: 382 HLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRRVALFSDITKNKQNQEVIW 441 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 QA D LT LPN R L + L +D + ++ YG +M Sbjct: 442 RQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLFLDLDRFKEVNDTYGHLMGDQL 501 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTG 432 ++ LL ++E + + +L G E +++LSG + + +Q + + +N Sbjct: 502 LQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDKDVVQDIAQSILKKFDTPFQLDNDL 561 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + + L + + + ++ L Sbjct: 562 THVSVSIGITIYPEDGNAGEVLFKNADQAMYVAKNNGRNR-YSYFTASMQAHAQNRMRLS 620 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N + AL LY QPI + + +L G++ PD F+PL + L Sbjct: 621 NDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQHPTRGMIPPDNFIPLAEETGLIV 680 Query: 550 RFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNI-AGRIIRLFKRYHISPQAV 607 V + + + S+N P+ + I + Q++ Sbjct: 681 DIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNETHGHEAWISFLLMNDLPRQSI 740 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 ++EITE ES + G ++A+DDFGTGY++ LK+ D +KID +FV Sbjct: 741 VVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGTGYSSLSYLKKFDIDYLKIDRIFV 800 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +++ N+ D + +I +A + V+AE +ET++Q+ LL ++G + QGYL P P Sbjct: 801 RNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQRELLQQIGCDFGQGYLFSPPLPA 860 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 22/196 (11%), Positives = 48/196 (24%), Gaps = 15/196 (7%) Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 + + + I L+L F L ++ A +L+ Sbjct: 8 LRYAAIRIPLIYCVFAVLWIMASDQTLALLLPEAASITHFQTLKGLLFILLTAALLYHLI 67 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFT-LGVGK 257 R +L+ A S+LL + + GY I + Sbjct: 68 HRQ-QLLASRYNSLTVHANDSILLFDHQGKLVDANDRALRMYGYTRDQMQHIHARQLLPD 126 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRS- 315 + + A + + + + +S+ +L S + +VR Sbjct: 127 AASDWRSCFLAEAQHNGIIFESEHKHADGSTFSVEVSACLLKIGGSDYIQAIVRDITERL 186 Query: 316 ------EWLNRRWHLQ 325 + Sbjct: 187 RVVEKLRESEQLLAHM 202 >UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5G1_9CHRO Length = 997 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 117/594 (19%), Positives = 213/594 (35%), Gaps = 36/594 (6%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 +++ +L+ +L + + + + A +R A + Sbjct: 402 IIAATVGILLTGVLTNVVVTLTHRRTQLEQQIQLRTAELKKMAERLRLALEAANQGIFDF 461 Query: 229 LLCTPYE-----NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNY 277 L T I Y F F+ + + A+ + N Sbjct: 462 DLLTNQATVSPEYALILDYNPEKFQETFSSLIERTHEDDREKIMAMYEAYLNGKISQHNL 521 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVC----LLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + + ++ + LL + + A DPLT Sbjct: 522 EFRQKTATGNWKWIMSVGKIVQWDAQHQPIRLLGTHTDITGHKQSEAKIKHLAYYDPLTS 581 Query: 334 LPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 L N R + E + + +D + ++ G H + + + L Sbjct: 582 LANRRLFLEHLESALSVARSKGEYGAILFIDLDQFKTLNDARGHDAGDHLLIEVAKRLKQ 641 Query: 386 LMQENEKLYQLPGSELLLVLSGPETE---------GRLQHMVNILNSRQIHWNNTGLDMG 436 +++++ + +L G E +++L E + + S + + + Sbjct: 642 SVRKSDTVARLGGDEFVVLLPQLHHEPTTAAHLSREVAEKVRQK-LSTPFVFQHEEFIIS 700 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F ET+ LL + Q + + + Q + L +R Sbjct: 701 ASIGITIFPKANETVSDLLKEADTAMYQVKEKGRN-GVCFFDTTMLVQVESRFTLEKELR 759 Query: 497 TALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ + LY QP + G + +L G++ P F+PL L Sbjct: 760 RALERQEFRLYLQPQVDINERIVGAEVLLRWQHPSLGLVPPCAFIPLAEDTGLIISIGEW 819 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 VL+ +LA SVN+ P L Q + ++ + ++ LEITE Sbjct: 820 VLQQACFFLADFQAKNPDFHLSVNISPRQLSQAEFVSNLKQIINITAVQANSLTLEITER 879 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + + + +L G +++DDFGTGY++ LKRL + IKID FV+DI + Sbjct: 880 LIIQDVDYVSSVMSKLQDLGINLSLDDFGTGYSSLAYLKRLPLNEIKIDKNFVQDIGNYS 939 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A ++ +I +A+ +L+VVAE VET +Q L K G + QGYL G+PQPL Sbjct: 940 NHAPLIEAILAVARHFNLTVVAEGVETIEQANFLKKRGCHFYQGYLYGKPQPLE 993 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 103/550 (18%), Positives = 201/550 (36%), Gaps = 29/550 (5%) Query: 208 LGKEKRAFTLSWLAALSVLLLL--------LCTPYENDFIAGYLVPVFFIIFTL----GV 255 + V + + + I G+ + Sbjct: 138 KRSIALRDRAIESSVNGVFIADASCADYPLIYVNPAFERILGFAPGSALGRACICRDGVP 197 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIY 312 G++ + ++ A+S N + + S+ LA + + ++ Sbjct: 198 GEVCNGYTDICQAISRGTEGYTVLNLERENGAQQSVELFLAPVENESGDVTHFIGVLNDV 257 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKSFCCLRIDNLEFMSRH 366 +R QA D LT LPN L + L +D + ++ Sbjct: 258 TARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGRLTAVMFLDLDRFKLVNDS 317 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NS 423 YG + IR + + ++ + + +L G E +++L + + L S Sbjct: 318 YGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLS 377 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + L + + + LL ++ + Sbjct: 378 ESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRN-NYCFYGPEMDH 436 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 +++ + + +R AL G+L + QP + G + ++ + ++ P +F+ Sbjct: 437 HARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIA 496 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + L QVL + + + +VNL Q ++ ++ + Sbjct: 497 VAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAE 556 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + LEITE A ++A+ S+ + L + G +AIDDFGTGY++ LKR D Sbjct: 557 TGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDT 616 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F++ I + D IV++I +A++ LS++AE VET Q+ L G + QG+ Sbjct: 617 LKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGF 676 Query: 720 LIGRPQPLAD 729 L GR P D Sbjct: 677 LFGRAMPAED 686 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 123/664 (18%), Positives = 238/664 (35%), Gaps = 38/664 (5%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 +R L + + +L + + + I T + Sbjct: 148 IGWVRIGLSQSADLKRFEKIKFSAFAFLLIAVTLAALFATVAARYLTRRLYAIQTVADEV 207 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + + V L M+ + + EKR + + Sbjct: 208 KQGKRSLRVK--LDGVDEAAQLAKRFNIMLDTLVKRENEIVESHQALEQSEKRLNQIMAV 265 Query: 221 AALSVLLLLL------CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST--- 271 + + D I + ++ AV Sbjct: 266 NHEGIWDWDIKADKVTHNQSWADMIGLDDNLLVHPAQVFFDAVHPDDRERVSRAVGECFK 325 Query: 272 -LCLLNYNQNFLQGV-ETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + F+Q E + V+ + ++ + Sbjct: 326 SKSHYHMEYRFVQRNTGKEVWVQDRGDVVEWDAEENPLRMVGGFYEVTERKKAEEAIQNL 385 Query: 326 ALTDPLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN R L+ +QE + + +D+ + ++ G +R Sbjct: 386 AFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFIDLDDFKTLNDTLGHDTGDKLLR 445 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----EGRLQHMVN---ILNSRQIHWN 429 + L ++E + + ++ G E +L+L + + + + ++ + Sbjct: 446 QVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAATHAELVAQKVLRVLNKPYLLD 505 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 +T F G+QETL+ LL Q+ A + + + + Sbjct: 506 STPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRN-TVRFYDTTMQEVVNAKS 564 Query: 490 LLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 ++ ++R A+ +L+ QP N + G + ++ G++ P+KF+PL + Sbjct: 565 VMEASMRQAITGQQFVLFYQPQINSNGQIIGAEALVRWRHPQKGLIAPNKFIPLAEENGF 624 Query: 548 SARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 VL++ + L +VN+ Q ++ + R+ + +PQ Sbjct: 625 ILSIGRWVLQTACEQLVEWARQPATAQITMAVNVSARQFHQIDLVEEVERIICQTGANPQ 684 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE + E + ++ L K G ++DDFGTGY++ LKRL D +KID Sbjct: 685 LLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSSLAYLKRLPLDQLKIDQT 744 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+DI+ ++ DA I R++ LAK+ +V+AE VE +Q +L +G + QGYL GRP Sbjct: 745 FVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGYLFGRPV 804 Query: 726 PLAD 729 P+ + Sbjct: 805 PIEE 808 >UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=Q1LBF7_RALME Length = 839 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 110/637 (17%), Positives = 215/637 (33%), Gaps = 29/637 (4%) Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 + G+V+ + L S + V+D T +L Sbjct: 188 VRLAAANALGGIVSDHASRHLHSLAHSNS-LYSARKFLSDNRLRHVGVLDAQGELTGLLS 246 Query: 179 YNMLFYYL-TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----T 232 + + + + A + S + A + V++ L Sbjct: 247 LSDILCGIEHEYVHELRTALHERDEALRRSNYHLRLADRVFESTLDGVMVTDLNGVIEQV 306 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + GY + + + + + + Y Sbjct: 307 NPAFTQLTGYTLDEAIGRTPRMLSSGRQGPSFYQEMWSQLRAQGHWKGEIWNRRKNGELY 366 Query: 290 SLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 ++ + + R + A+ DPLT LPN + +Q Sbjct: 367 LEHLSVSSICNQAGECTHYAAIFSDITHRRIAEERLNHLAMHDPLTDLPNRTLFSERLKQ 426 Query: 347 EAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 L +D + ++ G +R I L ++E++ + +L G Sbjct: 427 AIIRARRASRRVGVLFLDLDRFKMINDTMGHGTGDDALRVIAMRLKHAVRESDTVARLGG 486 Query: 399 SELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +V+ E + H+ +L + I + + + + Q LL Sbjct: 487 DEFTIVVEEIEDIRHVAHIAQVLLDVVGQPIDAAGRSVFVTPSIGISIYPDDGTDQQQLL 546 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q ++ ++ + + L +R AL + + L+ QPI + Sbjct: 547 MQADRAMYEAKQEGKN-TFRFFATQMTSSAMESMALECELRRALTRREFRLHYQPIYDLG 605 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + +L G+++P F+ + + L VL + A Sbjct: 606 SGRIVSVEALLRWQHPTRGLLSPGAFIDVAEESALVVPIGAWVLREACRQGAAWLRSGFE 665 Query: 573 P-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R SVNL + ++ + + + P+ + LE+ E A + + + +L Sbjct: 666 FGRMSVNLSARQIRHEHFLHDVSDVLSDAGMQPEHLQLELVESMAMTGNGVTELVLGELA 725 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G +AIDDFGTGY+++ L+ L D +K+D F+ ++ D I+R+I +A+A Sbjct: 726 RRGVGLAIDDFGTGYSSFTYLQTLPVDTVKVDRSFLTAVIERERDGAILRAIVAMARALG 785 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+VVAE VE Q L ++G QG+L+ RP P Sbjct: 786 LTVVAEGVENIAQLQFLREIGCDRAQGFLLARPGPAE 822 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 100/615 (16%), Positives = 200/615 (32%), Gaps = 34/615 (5%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ------ILWR 201 D P + +++ R++ Q + Sbjct: 225 DRPAVEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESRGRIVEFDEAGQPTLMIGTMLD 284 Query: 202 RDIAPSLGKEKRAFTLSWL-AALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFT 252 E R L + + + +L I GY Sbjct: 285 ITERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDAFSTITGYQADEIVGQNPRLL 344 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMV 309 + + + + + ++ L + + + Sbjct: 345 KSGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLVTEWLSISSLRDTTGTASHYIGIF 404 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLE 361 + R + D LT LPN + Q G + L ++ Sbjct: 405 SDLSERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQALLTARRFERGTALILLDLNRFR 464 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + R L ++E + + + G+E V++ E + + Sbjct: 465 LINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNEFGFVMANLSHERDALALAQRM 524 Query: 422 NSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + F N E + +L ++ Sbjct: 525 LDAISVPFSVAGQSVAITASIGISVFPKNGENGEAMLRSADAALLRAKQSGRN-TFSFYS 583 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 + +++ + + +R AL + + ++ QP + G + +L G ++P Sbjct: 584 PEMDADAARRLSIESALRDALARDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISP 643 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRII 594 +F+P+ + L + VL + +VNL P Q ++ ++ Sbjct: 644 VEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVAVNLSPRQFRQADLPAQVA 703 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + A+ LEITE + + ++ +L G ++++DDFGTGY++ + R Sbjct: 704 HALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSR 763 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D IKID FV+DIV N ++A I + + ++ +LSV+AE VET+ Q A L Sbjct: 764 FPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCD 823 Query: 715 YLQGYLIGRPQPLAD 729 +QGYL RP P + Sbjct: 824 AIQGYLFSRPLPPEE 838 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 119/585 (20%), Positives = 217/585 (37%), Gaps = 26/585 (4%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 ++ L+L + + A++ + A T + Sbjct: 229 ILGHLALLFSDQSAIPNLGSVLTTFSMRMVAELERLQSDAQLRLSAVAFETHEGIIITDP 288 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 +L + I G+ + L L + + TL L Sbjct: 289 DFKILRVNHAFSQITGFDSQRVIGLHL--GNDLWCGLGGLGYELGTLSRWQGETQRLHAD 346 Query: 286 ETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 Y I+ + + + RR A D LT LPN R L + Sbjct: 347 GYPYPQWEIVTPVQDDRGEISHFVICFEDISERKEAERRIQDLAYYDELTGLPNRRQLHE 406 Query: 343 APEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + +D+ + ++ G ++ + L L+++ + L Sbjct: 407 TLAHAFGEASRDYLIGALLFIDLDHFKTINDSLGHATGDWLLKEVASRLKRLVRQGDCLA 466 Query: 395 QLPGSELLLVLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDG 446 +L G E +L+L + E + + L S + L +G F G Sbjct: 467 RLGGDEFVLLLPSLSASPPQAEMQADLIAERLISEIAAPYNHAGQVLHIGASVGITLFPG 526 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 ++ + LL Q Q+ + + + Q +++L+ N +R+AL+Q +L L Sbjct: 527 REQGVDDLLKQADTAMYQAKSAGR-KTRRFFDASMQLQADRRLLIHNELRSALNQQELTL 585 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QP + G + ++ +++P +F+P+ + +L VL Sbjct: 586 YYQPQHMVEGGDIIGVEALIRWQPPGRALVSPAEFIPIAEETDLIVDIGNWVLYEACAQY 645 Query: 564 ATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + SVN+ + RI + + P ++ LEITE +AE Sbjct: 646 VRWEENGIHIPQLSVNVSAKQFHATDFVDRIHDVLASTGMDPASLNLEITESVVLGHAED 705 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ + +L G AIDDFG GY++ LKRL AD +KID F++DI + + IV + Sbjct: 706 TISKMSELKALGISFAIDDFGAGYSSLSYLKRLPADELKIDRSFIQDIPRDGDNMAIVEA 765 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + +A+ +V AE VE++QQ L G + QGYL +P P+ Sbjct: 766 VIAMARHMGFNVTAEGVESRQQLEFLQAQGCHFYQGYLASKPLPV 810 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 106/615 (17%), Positives = 214/615 (34%), Gaps = 31/615 (5%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + + L D + + S+ A + I A Sbjct: 67 VLARHRQFLDEGGTLGGEWTVMRRDGVILTIWSESVPFAQHGHRADRLVYVLDITERQKA 126 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII---FTL 253 + + A ++ ++ ++ + GY Sbjct: 127 REQMKIAAAVYESTQEAI------IVINTSRSIISINPAFTRLTGYSAADVVGQPSYIFR 180 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVR 310 + + V + + ++Y + V+ + + + Sbjct: 181 SDRHDADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVFS 240 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 + + QA D +T LPN + E+ + + +D+ + Sbjct: 241 DITQRKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEHAKQSGRPMALMLIDLDHFKS 300 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ G + ++ L +Q + + +L G E ++L+ G + L Sbjct: 301 VNDSLGHRAGDALLLAVSNRLTDCVQGADTIARLGGDEFAIILTDLHQNGDSGCLARTLL 360 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 ++ + + + + F + +TL+ L + + + Sbjct: 361 AQLAQPFNIDGESMLVSASIGIALFPNDSDTLEELFKNADQAMYAAKSAGRN-CFNYYTP 419 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + ++ L N +RTA+ G +Y QPI + + ++ G+++P Sbjct: 420 ALHQAARARLRLTNDLRTAIQCGQFEVYYQPIIELSTNKVVKAEALVRWRHPIRGMISPA 479 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGR-II 594 +F+PL L V + LA + ++N P+ L K+ + Sbjct: 480 EFIPLAEDTGLIVPLGDWVARQAITQLAQWRKIFDPHFQVAINQSPVQLRSKDFTEMTWV 539 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + ++ + AVI+EITE + N+ G +IAIDDFGTGY++ L++ Sbjct: 540 QELAQHGLEGNAVIIEITEGLLLNAESRVNDNLHLFRDTGIQIAIDDFGTGYSSLAYLRK 599 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +KID FV+D+ + + + +I +A + L VVAE VETQQQ L ++G Sbjct: 600 FDIDCLKIDRSFVEDL--DGVGFELCVAIIAMAHSLGLKVVAEGVETQQQCDTLARIGCD 657 Query: 715 YLQGYLIGRPQPLAD 729 Y QG+L RP P + Sbjct: 658 YAQGFLFSRPVPAPE 672 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 100/589 (16%), Positives = 210/589 (35%), Gaps = 28/589 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 + + L+ F + ++R I A+ + Sbjct: 293 SPILLESQLAPFLDMDGEPQGIVGISRDITEKRKAEERILTLSQAVEQSP------VSVV 346 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYN 278 ++ + + + GY + ++ + Sbjct: 347 ITNLKGEVEYVNSTFESVTGYSQAEVLGKDSSILKSGKTPPGRYADMWAKLVQGESWQGE 406 Query: 279 QNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + +A + L + + + + + QA D LT LP Sbjct: 407 FQNKKKNGEIFWEQAHIAPVLDAEGEVRHFLAVKQDVTKQKAQEEKILHQAHFDGLTELP 466 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + + L +D+ + ++ G M + + L + Sbjct: 467 NRFLAMHRLETMMHEAKRNQHQIAVLFLDMDDFKKVNDTLGHDMGDKILVEAAKRLQGSV 526 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRF 444 ++++ + +L G E +++++ E + + L + + + + + + Sbjct: 527 RDSDTIGRLGGDEFIVLINHLERPEQALPIAQNLLQQFRSSLTIDGRDILLTMSIGIALY 586 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 G+ T LL S A + + ++ + +++ L + ALD+ +L Sbjct: 587 PGDGTTPSELLRNADSAMYHSKAAGRN-SFHFYTQEMNIEANRRLQLEEQLHNALDRNEL 645 Query: 505 LLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L QP+ + + G + +L + G ++P++F+P+ L VL+ L+ Sbjct: 646 RLLYQPVVDLKTRKIVGAEALLRWDSKELGAISPEEFIPVAEHTGLIVEIGKFVLDDALR 705 Query: 562 WLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + ++NL P ++ I Y + + + LEITE S Sbjct: 706 TTSRWIKTFIPDFHIAINLSPRQFRDPHLIDNIESFVNSYGLEGRNLELEITEGVLMSQH 765 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 I +L + G I++DDFGTGY++ L+ +I+K+D F+ DI + D +V Sbjct: 766 ADVEEAIAKLTQKGISISMDDFGTGYSSLSYLRSYPFNILKVDRSFINDISVDAADLELV 825 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D+A L V+AE VET++Q ALL + QGY +P P + Sbjct: 826 NASIDMAHGLGLKVIAEGVETEEQTALLLRKNCDMAQGYYFSKPIPADE 874 Score = 90.0 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 33/314 (10%), Positives = 75/314 (23%), Gaps = 36/314 (11%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNF 79 + V L+ ++ ++P +I + W+ + + + + Sbjct: 43 ILVGLLGMAVMLTPWELIPGVFFDARWVLISLCG--------LYFGVIPTLIAVVMTVTL 94 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 L + +GS + + + LT W RL++LGL I + C Sbjct: 95 RLYQGGAGIYVGSAVIICSALIGLGWRAYIEKHNKALT----WWRLYFLGLSVQITVLCL 150 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 M+ ++ I ML + A+ Sbjct: 151 MFF-------------MPEHLRYKIIAAIAPTILIFYPIGTMLLGMILSRQEERRLAERE 197 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLG 254 + L + + L G+ Sbjct: 198 LHISRQILNRERGLLRGLIDALPDHIFIKDKEGKYLGCNKAFQSFTGHQEADLIGKTDQD 257 Query: 255 VGKLRYPF---LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLYM 308 + + + ++ L +N + + L LA + ++ + Sbjct: 258 FSESNHAITDKSDTLQVINNLLPINREAWTHEQDGSPILLESQLAPFLDMDGEPQGIVGI 317 Query: 309 VRIYHRSEWLNRRW 322 R R Sbjct: 318 SRDITEKRKAEERI 331 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 89/433 (20%), Positives = 175/433 (40%), Gaps = 16/433 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEF 362 + H QA D LT LPN + + + +D + Sbjct: 241 DITDRKMAENSLHYQAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKN 300 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI-- 420 ++ G + + S + L ++ ++ L + G E +++ + E ++ Sbjct: 301 INDTLGHTLGDELLGSFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVF 360 Query: 421 -LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + N L + + + + + ++ ++ Sbjct: 361 SILQQPFQVGNHLLYLKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNH-YQIYHP 419 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 +++ +T++++ + N + AL++ LL+ QP N + G + ++ G+++P Sbjct: 420 LITSKTSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPA 479 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 KF+P+ + L VL + R +VNL Q N + + Sbjct: 480 KFIPIAEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTK 539 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + ++ PQ + LEITE N E S + L G I++DDFGTGY++ LK++ Sbjct: 540 ILAETNLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQI 599 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + IKID F+KD+ D I+ ++ + + ++ V+AE VETQ Q LL KL + Sbjct: 600 PFNTIKIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEE 659 Query: 716 LQGYLIGRPQPLA 728 +QG+ +P Sbjct: 660 MQGFKFSKPLKPE 672 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 104/592 (17%), Positives = 204/592 (34%), Gaps = 25/592 (4%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 L L + ++ RM H +R Sbjct: 409 RIRTLASETLWILDSGKVMSRDESGCPLRMCG-IHTDITDRKRVEESLKLAASVYNNSRE 467 Query: 220 LAAL-SVLLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 ++ L++ I GY I R + + AV Sbjct: 468 AMSVQDDKGLIININAAFTDITGYTESEVKNQNIKILQCSRNNRSAYEQMHMAVEEEGRW 527 Query: 276 NYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + E+ + L L + + + + + QA D LT Sbjct: 528 QGEVWLRRKNGEEFVVWLTLNALFDAEAQTQRHVALFSDITEKKQAEKIIWKQANYDTLT 587 Query: 333 LLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN R L +E + L +D + ++ G M + + L Sbjct: 588 GLPNRRMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTLGHDMGDMLLSEAAKRLK 647 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAW 441 +++++ + +L G E +VLSG + + + + + + Sbjct: 648 ACIRDSDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAEPYNLGEETAYISASIGI 707 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + T++ LL + + ++ L+ +R+A+ Sbjct: 708 TLYPDDASTIEGLLKHADQAMYAAKDEGRNR-FHYFTPSMQRYAKYRMRLIQDLRSAIAD 766 Query: 502 GDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + LY QPI + +G + ++ G+++P +F+ + + L V + Sbjct: 767 HEFELYYQPIVSLQGGLGLKAEALIRWRHPKRGLVSPIEFIAVAEETGLIIEIGNWVFQQ 826 Query: 559 LLKWLATHPCD-KKGPRFSVNLMPLTLLQKN-IAGRIIRLFKRYHISPQAVILEITEEQA 616 + A + S+N P+ + + L K +++ + +EITE Sbjct: 827 AARQSALWRDRFGIEVQISINKSPVQFRDEGESINSWVNLLKTLNLTNNNICIEITEGLL 886 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + + Q G +I++DDFGTGY++ LK+ D +KID F +++ +N+ D Sbjct: 887 LDGNSAISSKLTQYRDSGIQISLDDFGTGYSSLAYLKKFDIDFLKIDQSFTRNLDSNSDD 946 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +I +A + V+AE VET Q+ +L G + QGYL RP P+ Sbjct: 947 FTLCEAIIVMAHKLGMKVIAEGVETDYQRKILANAGCDFGQGYLFSRPVPVE 998 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 120/621 (19%), Positives = 222/621 (35%), Gaps = 45/621 (7%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 F I+ GD I V + L + A + Sbjct: 396 FVRIQSITNERGDWGFIAIVGPIDDLVLISAADITQVGFT------ISAALLERDELFLQ 449 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTP---YENDFIAGYLV-------PVFFIIFTLGVG 256 ++ +S + + T + + + + + Sbjct: 450 IQTIAEQLEIVSSTTNDGIWDWDIITNQVTWNVRSLDIFSSVGEPLPTDSESFLNLVHPE 509 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + L E E + + + ++ + Sbjct: 510 DYYNVIESFKMHQYEGSSLKMEFRIQGEKEGEMWVYLTGDSIRDENGQAIRIIGSITNIS 569 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSR 365 + ++ A D LT LPN R A+ A + +D + ++ Sbjct: 570 EKKQQEKQIMHLAFHDGLTGLPNRRLLRSRLELAMTDADRYNYKLGLLLIDLDRFKVIND 629 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEK----------LYQLPGSELLLVLSGPETEGRLQ 415 G I+ + L M+ + + +L G E +++L+ LQ Sbjct: 630 TLGHQAGDELIQKVADVLELTMRSPDTHSRAKQEHTTVARLGGDEFIILLTHITDVSDLQ 689 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 N++ N + + + L G ++ + Sbjct: 690 ASANLIIEKFKEPFFIQNQDVFTSASIGISVYPDHGRDYDSLTGNADIAMYRAKENGKNQ 749 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 ++ ++ T ++ + N +R AL++ + +L+ QP N E G + +L D Sbjct: 750 -MEMYSSEINTLTMERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSD 808 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKN 588 GI++P +F+PL + L VL+ + P+ SVN+ L +K+ Sbjct: 809 RGIVSPMEFIPLAEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKD 868 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + Q + LEITE A N + SM +++L + G +IAIDDFGTGY++ Sbjct: 869 FVQAVKSILEDTQLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSS 928 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK+L IKID F++D+ + D IVR+I +A + L+V AE VET+ Q+ +L Sbjct: 929 LAMLKQLPISNIKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNIL 988 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + YLQGYL +P P + Sbjct: 989 LQEKCNYLQGYLYSKPLPAEE 1009 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 100/592 (16%), Positives = 217/592 (36%), Gaps = 37/592 (6%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++ + + + + I R + L + Sbjct: 219 SVIWISENARVVRDADGAVAYYEGTVVDITDRK-------RAEEQLAAQRAYFDQLFANS 271 Query: 222 ALSVLLLLL-----CTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLC 273 ++ L+ + + + + G+ + + L + A+ + Sbjct: 272 PQAIALIDMRRNIVDVNHAFEDLFGFKAAEIKGYGMRAYIVPKHLLGECESTRGAILSGK 331 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + ++ I + ++Y+ + + + QA D L Sbjct: 332 PMVRETFRQHRDGRLIPVSMIGFPIEFGGQPQGIVYIYQDISERKAFEEQITHQAFHDAL 391 Query: 332 TLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 T LPN ++ + + ++ + ++ G + + R Sbjct: 392 TGLPNRSLFADRLDRALTRARRRGDYQYAVLMIDLNKFKGINDTLGHQAGDQLLVEVSRR 451 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGA 439 L+ ++ + + +L G E ++L +++ + +V+ + + T + G Sbjct: 452 LMACVRSMDTVARLGGDEFAVILEELKSKKEVMAVVDRIGAALGKPCMLCGTTVTPGASV 511 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + ++ + +L ++ + + + + + L +R AL Sbjct: 512 GIVLRTRDYQSPEDILRDADIAMYRAKESGRPSMI--FDRRMHQEILDAINLEADLRAAL 569 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 D+G+LLL+ QPI + EG++ ++ D G++ P +F+PL + L V+ Sbjct: 570 DRGELLLHYQPIVDVQTGRIEGFEALVRWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVI 629 Query: 557 ESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 + L + SVN+ +++ + + + + + P + LEITE Sbjct: 630 AEACRQLRAWQLELPEAEQLSVSVNVSCHQFVKEGLVDHVAGVLETTGLDPACLKLEITE 689 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 +A+ + + +L G +IAIDDFGTGY++ L++L D +KID F+ N Sbjct: 690 SVLMHDAQHTAGELSRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVN 749 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 IV+SI LA++ L+V+AE VE Q Q L QG++ RP Sbjct: 750 GESQEIVKSIIALARSLGLTVIAEGVEHQDQLDKLRNADCDKAQGFMFSRPV 801 Score = 78.5 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 28/259 (10%), Positives = 55/259 (21%), Gaps = 28/259 (10%) Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 A ++ + VVL A G + T G S Sbjct: 23 AALVRDASGVVLAVNASFEALFGLDAAEVVGRDLRQVVRPADDGETAGGDWSLGGAAFSR 82 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 DA + + + R I RR Sbjct: 83 RTRWTAGDGVTVDACP-------CQFPAGQVDGKPVSCVIFRDISGR-------RRAEEQ 128 Query: 207 SLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY-----LVPVFFIIFTLGVG 256 E++ + A + L I G+ + F I Sbjct: 129 LDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFDSVDEMTEHFRDIKNQLYV 188 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + + + + + N+ + + ++ V+ V Sbjct: 189 EPKRRDDFVRELSAHDQVRNFESAIHKKDGSVIWISENARVVRDADGAVAYYEGTVVDIT 248 Query: 314 RSEWLNRRW-HLQALTDPL 331 + + +A D L Sbjct: 249 DRKRAEEQLAAQRAYFDQL 267 >UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica KT99 RepID=A9D5G8_9GAMM Length = 1066 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 109/568 (19%), Positives = 217/568 (38%), Gaps = 29/568 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLV 244 I + L + + + + K A + ++ +L+ I GY + Sbjct: 485 IAQLSHSLNLMLEERSKANRQLKLAAAVFESSSEGILVTDADNHIELVNPAFTQITGYSL 544 Query: 245 PVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + R+ + + ++ T + Y + V+ Sbjct: 545 EDVKGRSPSVLNSQQQTRHFYDEMWQSLQTEGKWQGEIWNKRKNGQVYPEYLAITVVKDD 604 Query: 302 SVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGK 350 + ++ + + + + D LT LPN + A E Sbjct: 605 AGQIIQHIGLFLDISNRKQYEQNIWYKTHYDLLTKLPNRSLYTIKVQQEMTMAQENNRQV 664 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D ++ + YG + +R + L L+ +++ + +L G E +++L Sbjct: 665 AILFINLDRFKYTNDIYGHEVGNKLLRQVASRLKSLVNKHDFVARLGGDEFIIILPRIRR 724 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + ++Q + + + + + L + F N + + L Q+ Sbjct: 725 QHQVQAIADKVNARLASPFGVDGDDLMISASIGISLFPENGSSEELLTRNAETAMYQAKN 784 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 ++ +++ L +R A+ + + L+ QPI N G + ++ Sbjct: 785 DGRN-NYRYYSSEMNEHILERIQLEQRLRQAVIRQEFCLHYQPIVNLDDRTITGVEALIR 843 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G++ PD F+P+ + L VL+ L LA ++N+ L Sbjct: 844 WQDPKFGMIAPDMFIPIAEETGLIEPIGEWVLQQALTDLAHWHRLGFKISMAINVSGRQL 903 Query: 585 LQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L +N + L K+ I PQ + +EITE + E M +E + G I IDD Sbjct: 904 LGQNKTSFKCLLKALLKKNDIEPQYLHIEITESMLMDDTEQCMTVLESIRSLGLDIYIDD 963 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR +IKID F+ +++ + DA ++++I + ++ L +VAE +ET Sbjct: 964 FGTGYSSLSYLKRFPIAVIKIDKSFIDNMLESESDAKLIKAIVMMGQSLELKLVAEGIET 1023 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q +L LG + QGYL P P + Sbjct: 1024 HAQWQMLQALGCDFGQGYLFSHPLPAQE 1051 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 110/614 (17%), Positives = 211/614 (34%), Gaps = 42/614 (6%) Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 +D + + S+ A L +LFY + R++ RR + Sbjct: 115 IYDAGTSVGKILVSRSLAPLLWKTSSVAVAALAAGLLFYTVLRILPLR-----AVRRAYS 169 Query: 206 PSLGKEKRAFTLSWLAALSVLLL--------------LLCTPYENDFIAGYLVPVFFIIF 251 EK+ +L V L ++ + G Sbjct: 170 SLEESEKKYRSLYESMKEGVALHRINYDEYGVPVSFTIVDVNPSCQLLLGLSSEELIGKD 229 Query: 252 --TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV 309 L G + F + A ST +++ Q + +A + +++ Sbjct: 230 GSELFGGAVAGYFPEILRAASTGEAFSFDF-VQQADKQRIHVAV----FFPETGYFAFLM 284 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLE 361 + + + A D LT LPN L EQ + L +D + Sbjct: 285 EDVTQRKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDRFK 344 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + L ++ ++ L ++ G E +++ + + + + L Sbjct: 345 VINDTMGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQHL 404 Query: 422 NSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + F + LL + Sbjct: 405 IDSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKE-GGGKGYHFYS 463 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 ++ + ++ + +R AL++ + L QPI + G + +L + G++ P Sbjct: 464 PEMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMP 523 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 D F+ + + VL + + + R SVN+ Q N + Sbjct: 524 DMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVC 583 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + P + LE+TE + E++ + QL + I IDDFG GY++ L++ Sbjct: 584 SIIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQK 643 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D IKID F++D+ ++ D IV +I +A L VVAE VET +Q L + G Sbjct: 644 FPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCH 703 Query: 715 YLQGYLIGRPQPLA 728 +QG+ RP Sbjct: 704 EIQGFYFHRPLSEE 717 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 111/685 (16%), Positives = 219/685 (31%), Gaps = 32/685 (4%) Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 + + HL G+ + + + + + L+T Sbjct: 364 VAISHGHLRLAWVVQRDGAASAPRVAVQRGDSTLVHLCAASLPPATHSHAMAVSQSLLTG 423 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 ++ V + PL + + +L + + Sbjct: 424 -TVQWRPGSVKPAGEAPLDLVSVPVRNLNQVVAAVVLVGNKLDPEDREQQALIAELGSDM 482 Query: 194 HFAQILWRRDIAPSLGKEKRAF---TLSWLAALSVLLLLLC-----TPYENDFIAGYLVP 245 A + R A R V++ L I GY Sbjct: 483 SHALAQFTR-EAQWQESLARTRLHAAALESTQDGVMVTDLRPRIVSVNRAFTEITGYSET 541 Query: 246 V---FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF- 301 F L + T + Y+ ++ + Sbjct: 542 EAVGMSPRLLQSGRHEPAFFTRLWNQLLTHGRWQGEVQNRRKNGELYTQWMSVSTVRDEH 601 Query: 302 --SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKS 351 + + + +R A DPLT LPN + E + Sbjct: 602 DQPTHYVSVFTDITPQKEAEQRLQHLAHFDPLTQLPNRLMVLSRLEHAIASAARAERRVA 661 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G +R++ L + + L +L G E +L+L Sbjct: 662 VLFIDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRREDTLGRLGGDEFILMLEHLREP 721 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + L + + + + + L+ Q+ Sbjct: 722 QDAAQVAQELIGLLETPFRVAGQEVYVQASIGISLYPDDGLEVGELVRDADAAMYQAKRA 781 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 E ++ ++ L +R AL+ + +L+ QP+ ++ G + ++ Sbjct: 782 GRG-VYRFYTESLTTAAQSRLALDTRLRRALENKEFVLWYQPLYRLADRCLIGLEALVRL 840 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 + + P +F+PL+ + V + + + R ++NL P + Sbjct: 841 NQPGLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQGRAWLDEGLDFGRIAINLSPQEI 900 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + R+ +R + + + LE+TE E + + +L G R+AIDDFGT Sbjct: 901 RRGQTDERVREALERSGLPAERLELELTESGLMEQGERAEAFLHRLRALGVRLAIDDFGT 960 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKR +KID FV+D+ + DA +V+++ + + +SV+AE VET+ Q Sbjct: 961 GYSSLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNLGISVLAEGVETEAQ 1020 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L LG QGY P+P + Sbjct: 1021 FDYLRSLGCDAAQGYFFSPPRPADE 1045 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 18/191 (9%), Positives = 40/191 (20%), Gaps = 16/191 (8%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 L + ++ + L +L + L L R+ + + Sbjct: 153 LDLAAMALERQLRLHSQVRIDHQRWLTLFTLGLLSALAITLMGVLMRLSRQRNESD---- 208 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVF--FIIFTLG 254 A E T L Y + +A + + I G Sbjct: 209 ---AALAASEAHLRTFMRAMPDVSFLFDRDGRYLDVFGPAEKLAEPVERMLGRRIADVHG 265 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 + + A+ T T + + ++++ Sbjct: 266 ERHVELFMSVIRLALETREPQRCEFALEVQQGT-RWFEARVCAVPDR-EQVVWVSWDISE 323 Query: 315 SEWLNRRWHLQ 325 R Sbjct: 324 RRAAELRVTEL 334 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 93/564 (16%), Positives = 196/564 (34%), Gaps = 27/564 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 Y + + R E A + ++ + I GY Sbjct: 452 LYAIGGITTDISDKVKAEREAEVTQQVFESAAEAILIYNPDGKVIT----NSSFNRITGY 507 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---I 299 + + + +S + + ++ L Sbjct: 508 DDKKARLFALSILKDHP----EIDATLSKTGRWQGESIRRKANGEPLPIWLSISALSSTK 563 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + + ++ A D LT LPN + Sbjct: 564 TEQSSYVAVFSDISELKEAEQKLEKLAHYDNLTSLPNRTLFYDRIESSLARAARNGKKTA 623 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + ID + ++ ++G + R + ++ + + +L G E ++LS + Sbjct: 624 LLFVDIDRFKQVNDNHGHHTGDQLLVEAARRISAHIRLGDTVARLGGDEFTVILSELDGL 683 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 +Q + + ++ + + + + LL Sbjct: 684 DPVQDIARRIQKSLRDPFRLDDKEIFSSASIGIAMYPDDGRNAESLLKHADVAMYHVKER 743 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILAR 525 + ++ ++ Q + L + ++TA++ L + QP N E + ++ Sbjct: 744 GRND-ILFFDKAINEQAEARAQLEDNLKTAINTQQLFMVYQPRFNISGTEILSAEALIRW 802 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL 584 + G ++P F+PL L VL + + + SVNL L Sbjct: 803 KHPEQGFISPGDFIPLAESCGLIVELGRWVLMQACQAAQEWNENTGQNTPVSVNLSARQL 862 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++ I + + P + LEITE + E+ + +E + G R+++DDFGT Sbjct: 863 HDSSLLIDIENALNQTGLDPSLLELEITETMVIQDMETVISRLEAIRTIGVRLSVDDFGT 922 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL +KID F+ D+ ++ +V+++ ++ + +L+VVAE VET+ Q Sbjct: 923 GYSSLIYLKRLPVSTVKIDKSFIDDVPGSSGSENLVKAVISMSHSLALNVVAEGVETEAQ 982 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 + L + +QGYL+ +P Sbjct: 983 LSFLTENHCDEIQGYLLAKPDSAE 1006 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 685 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 117/752 (15%), Positives = 241/752 (32%), Gaps = 67/752 (8%) Query: 43 FLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA 102 FLA G R F + +L + V+ Sbjct: 577 FLADPLTRPWHEAGLAAGVRASGAFPIRRFGKVVGAINLYAGERGFFSEDIVAVLDTMAM 636 Query: 103 ILRWQLGTRWRYG------LTSRYVWQRLFWLGLVTPIGIKCS-----------MYLVGS 145 + + L R + R +R P+ I M+L + Sbjct: 637 DVSFALDILARDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFT 696 Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 ++ + + + ++A F R+ + + + Sbjct: 697 GRSLEYELGDGWLEGMHPEDRSRWICAYSAAFDARKPFEIEYRLRRRDGEYRTILGKATP 756 Query: 206 PSL----------------------GKEKRAFTLSWLAALSVLLL-----LLCTPYENDF 238 A + S+++ ++ Sbjct: 757 RFDAGGEFIGYIGSCIDISDRKKGDESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFSD 816 Query: 239 IAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + GY F + + + AV + +++ + Sbjct: 817 MTGYSPEEAVGRTPAFLQSGRHGKEYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETI 876 Query: 296 AVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + + + + + H A DPL+ LPN R L + Sbjct: 877 VTVRDETGAMVNYIGVAADISSLKEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALAE 936 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 ++ + L +D+ + ++ G + + + + +E + + +L G E L+ Sbjct: 937 RRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDEFALL 996 Query: 405 LSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + + + + + + + + + + + LL Sbjct: 997 LPDLG-RDAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTA 1055 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 + + ++ ++ +L+ +R A+ G+L + QP + G Sbjct: 1056 MYHAKQQGRNQ-FRFYDPGMNVDILARLTVLSELREAIPAGELRTFFQPEIDLANGTLVG 1114 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSV 577 + ++ G+++PD+F+P+ +L VLE + LA V Sbjct: 1115 AEALVRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPITVGV 1174 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL + R+ L RY + ++ LE+TE +M +++L G + Sbjct: 1175 NLAARHFRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIALGCSL 1234 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFGTGY++ LK L +KID FV+DI + D I ++ L + L V+AE Sbjct: 1235 SIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAE 1294 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET++Q+ +L + G + QGYL RP + Sbjct: 1295 GVETEEQRRILLEQGCDFGQGYLFSRPLSSKE 1326 Score = 58.4 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 12/143 (8%), Positives = 29/143 (20%), Gaps = 9/143 (6%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVP 245 H Q + + +R A ++LL + GY Sbjct: 339 SERHHMQAALEAEKERADLS-RRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSRE 397 Query: 246 VFFIIFTLG--VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + G + + + + + + Sbjct: 398 ELAGMTLADVVAGDVEGVEHGRLDEALARGGGVWESVHTRKDGVPVPVELSVRSISVEGS 457 Query: 304 CLL-YMVRIYHRSEWLNRRWHLQ 325 + +VR + + Q Sbjct: 458 DFVQAIVRDVTERKRIELALARQ 480 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 111/629 (17%), Positives = 213/629 (33%), Gaps = 30/629 (4%) Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 V + + + A + L T + + L Sbjct: 13 AVAGRKFVLFAMGAVVLVWCLIGLDLWIASRHAAAKISFLPGETTPSELPTWKLFLLVLS 72 Query: 190 IVSPHFAQILWRRDI---APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAG 241 ++ +R+ + + A+ +++L +L + I G Sbjct: 73 VLLTALVVQAYRQLLATKRQVEAGLALQRLIVDHASEAMMLTDSAQRILSVNSAFEQITG 132 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y F + N+ V+ + T Y + + Sbjct: 133 YAGKDVFGKTPTMLSAGHQGLASHRNVWDFVAENGSWEGEIWDRRKDGTIYPKQMRITAI 192 Query: 299 IS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA------- 348 + + S R A DPLT LPN AL+ + Sbjct: 193 CEDGVQLSHFVAVFSDISESRAQAERLEYLARHDPLTNLPNRLALDAHLDTLLEGATPGI 252 Query: 349 -GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +DN + ++ G + + R L M ++L++L G E ++V+ Sbjct: 253 NRLALLIIDLDNFKTINDSLGHHAGDRLLSELARRLGAQMDLTKRLFRLGGDEFVVVVDQ 312 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 E + +V L + + L + + Q L+ Sbjct: 313 LINEEAVIELVQQLAGGIGDPCNIDGHVLHCTSSIGISLYPEDGRDAQALIRNADTAMYY 372 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A+ E ++ K++ L + + AL + L+LY QP + + G + Sbjct: 373 AKANGRN-NHKFFTEPMNAAANKRLHLESELWCALAENQLVLYYQPQIDLLSGKVVGVEA 431 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLM 580 ++ G++ P +F+P+ + L VL + + +VN+ Sbjct: 432 LVRWRHPLRGLIPPAEFIPVAEECGLILPLGHWVLLTACRQAREWLDAGIDMGEMAVNIS 491 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 Q + + + + LEITE ++++ + QL G ++AID Sbjct: 492 AHQFRQPEFISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAID 551 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L+R D +KID F+ D+ T+ A +V SI L ++ L +VAE VE Sbjct: 552 DFGTGYSSLAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVE 611 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L L + +QG+ +P + Sbjct: 612 NFAQAEFLRTLECERVQGFHFYQPVCAEE 640 >UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUW0_DESOH Length = 764 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 108/735 (14%), Positives = 228/735 (31%), Gaps = 34/735 (4%) Query: 24 LIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSF 83 + + I FL + + + + G V +L +F T L Sbjct: 19 FLMAFGAYVIWSAICYVGYFLGLTKVPLYILSAGVAGSFIVNILLYLIFRTGLNKKFQDK 78 Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 T + + TF ++ + + + I + Sbjct: 79 SLTLIQMVIATFWIMVVVYYAYEARSAVLLVYMVVLVFGLFRLRIRQFLFLSIFALVNFS 138 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 F + IF +V L + + Y+T + S A Sbjct: 139 AVIFVLYKLQPGYINVRVDIFNIVVLAFILPWFSVV---GGYITNLRASISRAFTTIELL 195 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 +S + +L + L F + + Sbjct: 196 TNNIEDIVFVVDLDLNYTYVSPSVKILRGYEPEAVMKQALSDSFAPSSLDLAMRTLSEAV 255 Query: 264 NLTWAVSTL--CLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWL 318 L + T + T + + +V +L + R Sbjct: 256 ALGKSGGTEYNKSRTLQLEIKKKDGTTVWTETKFSFVRDKNKQTVGILGVSRDITERRLA 315 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + A D LT LPN Q + + + +D + ++ G Sbjct: 316 EEKIRYLATHDNLTELPNRTLFGQMLGRAIKFAQRYQRQFAVLFIDLDRFKIINDTMGHD 375 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQL----------PGSELLLVLSGPETEGRLQHMVNI 420 ++ I ++ + + +L G E ++++ ++ + Sbjct: 376 AGDQLLKEIASRFRQSLRAVDVVGRLNEKDSVVGRLGGDEFVVLIEEVTNLSQVATVAQK 435 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + + + + + E + L+ + + Sbjct: 436 ILNTAIKPMVLLGEECRVTASIGISVYPDDGEDERTLMKKADMAMYFAKEEGKN-NFQFY 494 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + ++ + +R AL++ +L L Q + G + +L G++ Sbjct: 495 SQNTHSPAFERFFVEAELRHALERNELYLDYQAKLDFKTGAITGSEALLRWRNPGLGLVA 554 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +FLP+ + L V+++ +VNL L+ + I Sbjct: 555 PTQFLPVAEETGLIVPIGRWVMKTACAQNVAWQRQGLPPVTVAVNLSLRQLMDDKLIEDI 614 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + ++P + LEITE + + ++ G RIA+DDFGTGY++ ++K Sbjct: 615 RTALEASGMAPNLLELEITESIVMHKPAPLIELLARIKSLGVRIALDDFGTGYSSLAQIK 674 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L D +K+D F++++ N D I+ ++ + +A SL+V+AE VET Q L + Sbjct: 675 HLPVDTLKVDRSFIRNLQQNPDDREIIEAVIAMGRALSLNVIAEGVETLAQDTYLREHIC 734 Query: 714 QYLQGYLIGRPQPLA 728 +QG+ +P Sbjct: 735 DEMQGFYFSKPVAPD 749 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 120/568 (21%), Positives = 221/568 (38%), Gaps = 34/568 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFF 248 +R A E++ + ++ + L + GY Sbjct: 558 RDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVI 617 Query: 249 I--IFTLGVGKLRYPFLNLTWAVSTLCLLNY-NQNFLQGVETEYSLAFILAVL-ISFSVC 304 ++ +G+ L + +++ ++ + + ++ C Sbjct: 618 GHTVYEIGIWADDKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNEVDC 677 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 LL R + + + A DPLT LPN L + L Sbjct: 678 LLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLD 737 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----E 411 +D+ + ++ G + ++ I L ++ + + +L G E +++LSG E E Sbjct: 738 LDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVE 797 Query: 412 GRLQHMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 +++ + L + + + L + + T LL + ++ Sbjct: 798 EKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDS 857 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + ++++ + N +R AL +G+L L+ QP + G + +L Sbjct: 858 GRNTT-QLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRW 916 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK----GPRFSVNLMP 581 G P +F+ ++ + L +L+ A D VN+ P Sbjct: 917 HHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISP 976 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q + GR++R Y + Q + LEITE N E ++ + +L ++G A+DD Sbjct: 977 RQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDD 1036 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL D +KID FV+D + DA IVR+I +A++ L+V+AE VE Sbjct: 1037 FGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVEL 1096 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q A L +LG QGYL RP PL + Sbjct: 1097 TEQLAFLERLGCHLYQGYLHSRPLPLPE 1124 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 11/139 (7%), Positives = 22/139 (15%), Gaps = 14/139 (10%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLV----PVFF 248 +R ++R A L L + G F Sbjct: 307 TERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLPPIPFHESFD 366 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTL--CLLNYNQNFLQGVETEYSLAFILAVLISFSV--- 303 F R ++ T + + Sbjct: 367 AFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYIESRARLYRDDQGIPL 426 Query: 304 CLLYMVRIYHRSEWLNRRW 322 + + +R Sbjct: 427 RMAGTLLDITDQVEREQRL 445 Score = 52.7 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 27/263 (10%), Positives = 58/263 (22%), Gaps = 21/263 (7%) Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 W L ++ + W GT+ +G + + P Sbjct: 62 QAWQNAPQLLAALNGAHLGAWLWDIESGRVSWSRGTQALFGFDPQRPLPADIDYLDLLPE 121 Query: 135 GIKCSMYLVGSFFD----FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 + V + D +++ T + R I Sbjct: 122 EDRARTRQVFQAVVNGEPVEQAMRHRIRWPDGSLHWLEINGSLTHDPHGRPQMIGVIREI 181 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLV 244 R + EKR TL L+ ++LL + + + G+ Sbjct: 182 T-------RQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPG 234 Query: 245 PVFFIIF--TLGVGKLRYPFLNLTWAVST-LCLLNYNQNFLQGVETEYS-LAFILAVLIS 300 LG+ + + L F + + + + Sbjct: 235 SQVIGKTSLELGLWVNPEQRHQIVESTRANGGPLIMEVQFRATSGKVHDGILCTQGIELE 294 Query: 301 FSVCLLYMVRIYHRSEWLNRRWH 323 L+ + + Sbjct: 295 GVTFLISTFVDTTERKRAEQALK 317 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/147 (7%), Positives = 30/147 (20%), Gaps = 11/147 (7%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT------PYENDFIA 240 RM + E++ +L ++ + + T Sbjct: 426 LRMAGTL-LDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTF 484 Query: 241 GYLVPVFFIIFTLGVGKLRYPFL---NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 G+ +G + + L N + + Sbjct: 485 GWSSAQVLGRTAEEIGLWAESVERAKRIEQVIREQALSNVAVVLNHRNGDPLTCVISSRL 544 Query: 298 LI-SFSVCLLYMVRIYHRSEWLNRRWH 323 + C + +R + + Sbjct: 545 ITVDDQPCSVTTLRDITQQQRAEAALK 571 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 100/593 (16%), Positives = 202/593 (34%), Gaps = 27/593 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++ + S + + I A+ G + W A Sbjct: 625 SVLWGLVSRSAWYDQWGNYRGELAMLTDITKRKSAEQALSASEQRLEGILGSIQDVVWSA 684 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS----TLCLLNY 277 +V L + G + V + ++ L Sbjct: 685 -DAVSFATLYLNPTTAMVYGQSLEVCYQSQNFWFEQVHPGDRLLLEYHLQLLMEKDQTEL 743 Query: 278 NQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 +Q E L ++ + + + + + H A D LT L Sbjct: 744 EYRIVQPGGKERWLFRRSQLVRDGEHQPLRIDSIDSDITERKLAAEKLHYNANHDSLTNL 803 Query: 335 PNFRALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 PN ++ + L +D + ++ G ++ I L Sbjct: 804 PNRSMFLDRLGHALQRNLRRRDLRFAVLFLDLDGFKIINDSLGHSCGDLLLQGIAHRLRQ 863 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWG 442 ++ + L +L G E +++ + + + + + N + Sbjct: 864 CLRPEDTLARLGGDEFTMLIENITCPEDVIAVAQRIHQELQKPFNLNGQEIFTNTSIGIA 923 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + Q +L ++ A + + +++ N +R A+D+ Sbjct: 924 LNHPHYGHPQDVLRDADTAMYRAKAAGKGR-YAIFNQTMHHHAVQRLQRENDLRRAIDRQ 982 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 +L L+ QPI + +G + ++ + G++ P++F+ + + L +L Sbjct: 983 ELQLHYQPIVCLKTGQLQGVEALVRWQHPEEGLILPEEFVAIAEETGLIVPMGDWILWEA 1042 Query: 560 LKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + + S+N+ L + + + + +++PQ + LEITE Sbjct: 1043 SRQILELKQSFPQLSHLQVSINVSSRQLRDQRLLKTVDEILSSTNLAPQDLKLEITESLL 1102 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N + ++ L + +I++DDFGTGY++ L R + IK+D FV + N + Sbjct: 1103 IDNLNLAADVLKSLRQRNIQISLDDFGTGYSSLSYLHRFPINTIKVDRSFVNTMEPNNQN 1162 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV +I LA L V+AE +ET++ LH LG QGY RP P D Sbjct: 1163 TAIVHTIVTLAHTLGLDVIAEGIETERHLTQLHWLGCDAGQGYYFARPIPSED 1215 Score = 65.4 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 8/148 (5%), Positives = 34/148 (22%), Gaps = 12/148 (8%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 ++ + + L + + ++ + I G+ Sbjct: 280 HILAAAIDRQEYEERLLLLQQAIDASSNGILITDALGSDNAVV---YANQGFETITGFNR 336 Query: 245 PVFF------IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 ++ G+ L A++ + + L+ + Sbjct: 337 EEVIGQNCRFLLNEDRQGEQNKQLEKLRTAIAHGQECEVVLKNYRKDGASFWNHLYLSPI 396 Query: 299 ISFS---VCLLYMVRIYHRSEWLNRRWH 323 + V + + + + ++ Sbjct: 397 YNQQNFLVNFIGIQTDVTQQKLAEQQLR 424 Score = 49.2 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 5/128 (3%), Positives = 22/128 (17%), Gaps = 11/128 (8%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 + E+ ++ +L++ + Sbjct: 409 IQTDVTQQKLAEQQLRASEEFFSSMIVTITDGLLIVDQEGIIQF----------VNPAAR 458 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRI 311 + L + + + + ++ + L +R Sbjct: 459 EMFKRQEGELLQQPFGIPFVADQATEITLTPLDGSMVVAEMRVSPIHWQKGKAFLVSLRD 518 Query: 312 YHRSEWLN 319 Sbjct: 519 ITEQHQAR 526 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 107/687 (15%), Positives = 219/687 (31%), Gaps = 34/687 (4%) Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 + + + + + + ++ R+ L Sbjct: 314 LRLAQEAAGAGVWQRDLDDDVVRHSPMSARMHGFLGEPDLSGWIAVSIAEWAARVHPDDL 373 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 + G+ + ++ D + + + + L I Sbjct: 374 AQVRAMHAGALRNGTTYKVEFRVRQSADMDDYRWLMGFGRVIRDETSGRPLRVVGLNLDI 433 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVP 245 + + E+R + + T + GY Sbjct: 434 TDRRTTEDALAQSQTHLRASEERLALALDSGNDGLFDWNVTTGKVWYSDRWQTMLGYKPG 493 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLA----FIL 295 + L+ + + + + Sbjct: 494 EIEPHILSWERLVHPDDLHQARTLLTEHFGELSATYSSEHRLRSKSGEYTWVLGRGRVVA 553 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA------- 348 + ++ + +R A D LT LPN + EQ Sbjct: 554 RDEQGAPLRMVGTSIDITERKASEQRIAYMARHDVLTGLPNRTVFHEHLEQRLAEVRRGR 613 Query: 349 -GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + CL +D + ++ G + I L ++ + + +L G E +++S Sbjct: 614 GQAALLCLDLDRFKSINDMLGHPAGDELLCQIATRLRATVRGGDVVVRLGGDEFAIIVSH 673 Query: 408 PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + + + +G N +T + L + Sbjct: 674 LDHARQASVLAQRVIDAVGQPLDLGGHLVTVGISIGIAFAPTNGDTSETLFKNADLALYR 733 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + A E + ++ L +R A+ G L+ QP+ + G++ Sbjct: 734 AKASARN-TYCFYEAGMDAAVEARMQLEFEMREAITCGSFALHYQPVLRLADHRIVGFEA 792 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 ++ G++ PD+F+P + L L+ + A+ P R +VN+ Sbjct: 793 LMRWPHPKRGMIAPDEFIPSAEETGLIVPLGSWALQEACREAASWPD---HLRIAVNVSA 849 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + Q + ++ ++P ++LE+TE +AE+ + + +L G RIA+DD Sbjct: 850 VQFQQPGLEQGVMSALAASGLAPHRLVLEVTESVLVQDAEAVIACLHRLKSLGVRIALDD 909 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+R D IKID F+ +I + A IVR++ +A +V AE VET Sbjct: 910 FGTGYSSLSYLRRFPFDRIKIDRSFISEIG-DPGAAAIVRAVVGIAMQLGATVTAEGVET 968 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q + G +QGYL+ RP P Sbjct: 969 TAQLEQVRSEGCMEVQGYLVSRPLPAD 995 Score = 54.6 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 52/245 (21%), Gaps = 15/245 (6%) Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 V CA AIL + + R+ L L + L + I Sbjct: 76 VAFCAYAILSDDVLVVENAAVDPRFAINPLVVGDLAVRFYAGAPLILRSGIRVGTICIFD 135 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 + + L L V+ L + ++ A R A E R Sbjct: 136 TKPCSFSEMQRTQLQDLARIVVA----HIELHQGRLTIEAALAERTRSEALIAANEARYR 191 Query: 216 TLSWLAALSVLL---LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 L+ V + Y N+ Y + + Sbjct: 192 ALADALPQMVWVMTSADGSAIYTNERFRTYYGSIGPQREERTSRNHPADTERMAEEWQRA 251 Query: 273 CLLNY----NQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + T ++ + V L Sbjct: 252 VTHEHTYAVEGRLRRHDGTYRWHKLVMVPVRQNGTVVEWLGTALDIEDIVTARSTLEH-- 309 Query: 327 LTDPL 331 TD L Sbjct: 310 TTDLL 314 >UniRef50_A3IYN4 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IYN4_9CHRO Length = 837 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 108/623 (17%), Positives = 212/623 (34%), Gaps = 57/623 (9%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD---------------- 203 + I + + R I A+ ++ Sbjct: 204 QEDIRWHQWINRGIFDENGQLTEIQAVGRDITLLKEAEAKLQQLNLDLDNRVKERTKQLE 263 Query: 204 ---------IAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFI 249 ++ A L +++ +L + GY Sbjct: 264 AKIQEKIKIETELKQSKESFQKAIINAPLPIMIHAEDGEILQINDIFTELTGYTHDEIPT 323 Query: 250 IFTLGVGKLRYPFLNLTWAV-----STLCLLNYNQNFLQGVETEYSLAFILAVLI---SF 301 I T + + + E + L F A L Sbjct: 324 IDTWLEKAYGKRQNIIRPVINHLYDLETKIDEGEFVIDTSDEKQKILNFNSAPLEQLSDG 383 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSF 352 ++ M + + AL D LT LPN Q + Sbjct: 384 RRVVISMAIDVTERKKAEEKLRHNALHDTLTKLPNRLLFIDRLNQSIERIKRHPTYSFAV 443 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D + ++ G ++ + I L ++ + + ++ G E +++L+ E++ Sbjct: 444 LFIDLDRFKLINDSLGHIIGDRVLIQIATKLTSCVRSLDTVARIGGDEFIILLNDLESKI 503 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + H+ + I + + N E ++ ++ Sbjct: 504 KAIHIAERILETLKLPIIIEQRNIVISASIGIAFNSQNNEEADDIIRNADLAMYKAKEQG 563 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARL 526 + ++ Q K++ L +R L++ + ++Y QPI +K+ G++ ++ Sbjct: 564 KAR-YMIFDSVMYAQAQKRLELETNLRIGLEKQEFIVYYQPIISLVDKKLVGFEALVRWQ 622 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLT 583 G++ P++F+P+ L VL + LAT + S+NL Sbjct: 623 HPQKGLIPPNEFIPVSEDTKLIIPIGEWVLLESCRQLATWQQKYPECSMLKMSINLSIKQ 682 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L +I ++ + ++ ++ LEITE N + Q+ G ++IDDFG Sbjct: 683 LKNNTFVSKIEKILDQTGLNGNSLKLEITESILMENILELRDILRQIKSLGIELSIDDFG 742 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L L D +KID FV ++ + + I+ +I LA LSV+AE +ET+Q Sbjct: 743 TGYSSLSYLHNLPVDNLKIDRSFVIEMNQSEGNYRIIETIITLAHQLGLSVIAEGIETEQ 802 Query: 704 QQALLHKLGVQYLQGYLIGRPQP 726 L L ++ QGYL +P P Sbjct: 803 DLQTLRDLQCEFGQGYLFSKPLP 825 >UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 Tax=Clostridia RepID=Q3AAV9_CARHZ Length = 769 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 100/580 (17%), Positives = 198/580 (34%), Gaps = 35/580 (6%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN---- 236 + L I +R E+R + A+ + L T Sbjct: 174 AMNEELMAREEEVRQNLIEIQRQQDELKKSEERYRLVVEGASDGLWDWDLETDTAYISER 233 Query: 237 ---------DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + I Y I V + N Sbjct: 234 WRDLIGFDKEVINNYCETWIKFIHPRDVKAVINNLRNHLE--KKTPFYLCEYRIKTKDGK 291 Query: 288 EYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + L ++ + + + + + A DPLT LP + Sbjct: 292 YIWILSRGKALWNKEGKAIRMAGSHTDITQRKQMESKLEYMAFHDPLTNLPRRDVFLERL 351 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + +DN + ++ G ++ I + L ++E + + ++ Sbjct: 352 KVAMADARRNGKKLAVFFVDLDNFKIINDSLGHHTGDRLLKKIAKELTKCVRETDTISRV 411 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++L + + + + I NN L + + + ++ + Sbjct: 412 GGDEFIILLPDVNSIEDTDKVAKRILELFDQPIKLNNYELPVTISIGIAIYPDHGKSERA 471 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 +L + + + + + +R AL++ +LY QP+ + Sbjct: 472 ILKNADIAMYTAKRKGKN-GFQYFDIAMKSEVEFANTVKRDLRLALEKNQFILYYQPLID 530 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + + +L G+++P F+P+ + VL + + + Sbjct: 531 LKTGKIASMEALLRWQHPKKGMISPFHFIPIAEETRQIISIGEWVLRTACRQMKEWLGMG 590 Query: 571 K-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 G SVN+ L Q N A + + K + P+ + LEITE E+ + N+ Sbjct: 591 YSGFSVSVNVSVHQLEQPNFAKVVCDILKEIELEPRYLELEITETVLIEAVETVVENLYH 650 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L K G +I IDDFGT +++ +++ D +KID FV I + ++ I+ +I L Sbjct: 651 LKKAGVKIIIDDFGTENSSFRYMQKFTVDGLKIDRSFVNGIKID-VNKAIIDAIILLGHR 709 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V AE VET++Q L + G +QG+ +P P + Sbjct: 710 LKLPVTAEGVETREQLECLIESGCDKVQGFYFSKPLPPDE 749 Score = 41.9 bits (98), Expect = 0.100, Method: Composition-based stats. Identities = 8/136 (5%), Positives = 30/136 (22%), Gaps = 4/136 (2%) Query: 190 IVSPHFAQILWRRDIAPSLGKEK--RAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 + + ++ + + + W V+ T D + Sbjct: 15 MEESQKSITYLKQKEEFLSKILENEQLLIVVWTLESGVVWFNRYTQNLFDIAIEEQLEKI 74 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC--L 305 + + + Y L + + E + + ++ + Sbjct: 75 DVSLIIPENLISYLKEQLDDTGERSFRYIDEKPMVLKNGREIYIMWHNSIFSDEEGHKYI 134 Query: 306 LYMVRIYHRSEWLNRR 321 + + +R Sbjct: 135 VSTGIDVTELKKTEKR 150 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 117/631 (18%), Positives = 215/631 (34%), Gaps = 29/631 (4%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 L + S+ + D ++F V S+ T + Sbjct: 382 LSRIAPSLGGAAWMSLQQRIARGDNVTLETSFSCRNGQTLAVEVTASVLTHTEGDGL-LC 440 Query: 185 YLTRMIVSPHF-------AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + R + + R + S + ++ + + Sbjct: 441 LIARDVSELKQAAAALANSDARLRLALQASGTGLYELELATGAITITGAIRQRLDIRVPE 500 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + ++R F + L + + Sbjct: 501 QQPIPAALWLAWVHPDDQARIRQAFEHWQQEPHAPDRLETSFRVCPPGGRMRWVHARGQY 560 Query: 298 LISFSV----CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + L+ V + + A D LT L N AL + + Sbjct: 561 IAAAEDTAAARLVGTVNDVTDQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVHQ 620 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + + +D + ++ G + +R + L ++ L +L G E LLVL Sbjct: 621 HQHPLAVLFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVL 680 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G E + + S + + L + + E L+ Sbjct: 681 PG-ADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAM 739 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 Q+ A ++ +++ L +R A +G+++L+ QP + G Sbjct: 740 YQAKARGRN-TFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGC 798 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + ++ G+++P +F+PL + L + + +VN Sbjct: 799 EALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVN 858 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L Q N + + PQ + LE+TE + E + + +L G +++ Sbjct: 859 LSGCQFQQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLS 918 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D++KID FV+D+ T+ DA IVR+I L K +L ++AE Sbjct: 919 IDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEG 978 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VETQ Q LH GV ++QGY RP P D Sbjct: 979 VETQGQLDYLHAAGVDFIQGYYFSRPLPAED 1009 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 118/653 (18%), Positives = 218/653 (33%), Gaps = 41/653 (6%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 V QR + + LV + + + + +L Sbjct: 55 ARTLVRQREYGVVLVDMQAEDTASLDLMEWLHNHRAGMDVIALTADPTCRAPIEALRRGA 114 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIA------PSLGKEKRAFTLSWLAALSVLLLLL 230 + + M+ + R E+ + + + +L Sbjct: 115 SEFIRKPFAPEAMLATLENTLERRRLSRQNEQIRHRLKRSERLYRFIVDNSPDFIYVLDA 174 Query: 231 CT-----PYENDFIAGYLVPVFFIIFTL--GVGKLRYPFLNLTWAVSTLCLLNYNQNFL- 282 + + G + R T +N Sbjct: 175 EGRFTFINRSAERLLGMTPDTLLGEHFQCLIADEDRAVAERRFNERRTGQRATHNLELQL 234 Query: 283 ----QGVETEYSLAFIL--------AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + ++ A + + R + H QA D Sbjct: 235 APPGAAGQPTRTVDLTAMGIYADGDAPHPGQFLGTYGIARDVTDRKHAESIVHYQAHHDL 294 Query: 331 LTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L+ Q + L +D + ++ G + ++ + + Sbjct: 295 LTGLPNRALLKDRLAQALARARRGNEEVAVLFLDLDRFKVVNDSLGHSVGDQLLQQVAQR 354 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGA 439 L ++E + L +L G E L+L ++ + + +N L +G Sbjct: 355 LRACLREGDTLARLGGDEFTLLLPAIPDRPAVERVAQKCIDALEQPFMVHNHRLFLGVSI 414 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + ETL+ L+ H ++ + + + + +R AL Sbjct: 415 GIALFPEHGETLETLIKHADVAMYHVKEHGKGH-YTFFDQAMGSRIDHHLNMETGLRRAL 473 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +Q + + QP + G + ++ + G ++P +F+P+ Q L +L Sbjct: 474 EQHEFRVAYQPQVDVVSGRVTGMEALIRWQHPETGEVSPREFIPVAEQTGLILPIGEWLL 533 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 S + L P +G R +VNL PL + Q++ R+ + + + LEITE Sbjct: 534 RSACEELLRWPDGNEGLRLAVNLSPLQVHQRDFVDRVRAICDETGFPLRRLDLEITENLL 593 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + ES + + L + G I IDDFGTGY++ L+RL +KID FV I N Sbjct: 594 MRDVESVVEKLRTLSRLGVTITIDDFGTGYSSLGYLQRLPIHALKIDQSFVHAIRENEEK 653 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V +I +A L+VVAE VET++Q L +L +QG+ P + Sbjct: 654 GTLVETIIAMAHGLGLNVVAEGVETKRQLDYLRRLQCGRMQGFYFSYPLSGHE 706 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 98/552 (17%), Positives = 181/552 (32%), Gaps = 26/552 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCT------PYENDFIAGYLVPVFFIIFTLGVG 256 + + VL+L + I + FT V Sbjct: 931 VQRQLEDEVNLLAKAFGNTSEGVLILDVEGSIRVANYAAQQIIGIDSTDLVGQSFTQFVQ 990 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYH 313 + +S + + + + ++V+ + + Sbjct: 991 MNDGLASEIKQLLSDSQSWTGERELINASQQPCPVWLNVSVMQSANGKVTHYVVVFSDIT 1050 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + A D LT LPN + + L +D + ++ Sbjct: 1051 ERKQTEADLRRLANYDVLTGLPNRSLFSSRLLQSIQAAQQTGEKLALLFLDLDRFKHVND 1110 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 YG M + L + L + G E +++L + + H+ L + Sbjct: 1111 SYGHSMGDALLVEASSRLQSCIASEHMLCRFGGDEFVILLRNANSIDDINHIAERLLEQI 1170 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + + + + + Sbjct: 1171 VAPFKLYGREFYISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGRG-NFQYYSSERN 1229 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN----KEGEGYDEILARLKYDGGIMTPDKF 538 Q + L +R A+++ + LY QP + + G + ++ G + PD F Sbjct: 1230 AQALYHLRLEADLRKAIERQEFELYYQPQIDILRNDKLIGMEALIRWKHPLDGFIRPDIF 1289 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 + + L D VL A + SVN+ + Q + I + Sbjct: 1290 IKVAEACGLIVDIDRWVLRQACVQGAHWAKRYGSTFKLSVNISAVHFRQPDFIEDIQSIL 1349 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + ++ LEITE + ++ +L G +AIDDFGTGY++ L+ + Sbjct: 1350 HETQMPTASLGLEITEGVLMKELHVAKDHLSRLKSLGIEVAIDDFGTGYSSLAYLRHFEV 1409 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 + +KID F+ DI TN D IV SI +LA+ L+VVAE +ET +Q + G +Q Sbjct: 1410 NTLKIDRSFLIDIATNKADQAIVSSIIELARNLKLNVVAEGIETVEQLEQVFSRGCYIIQ 1469 Query: 718 GYLIGRPQPLAD 729 GY +P +AD Sbjct: 1470 GYYFAKPMCVAD 1481 Score = 66.1 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 19/212 (8%), Positives = 44/212 (20%), Gaps = 8/212 (3%) Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 Q + + G + D P + + + L +I Sbjct: 733 SQINLAGLASGGYVLDILSQVNGIWSDKPFTYPFYVEQHWWLSQGFKGILLLLFSIIALS 792 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 L +Y R I + + + + W + L Sbjct: 793 LAWYRQRQINTFKQMNQALTESDDRLRQSLRGSDSDLWEWHKNTQAFHLD-NRGAVLGTH 851 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFILAVLI 299 V + + R L ++ + + + L + Sbjct: 852 ANEIVVSLAELPVHPQDREKALAQWDSMISGEIDRFEAEYRYQRKDGNWGWLRVRGRPVA 911 Query: 300 -----SFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + + L +L A Sbjct: 912 RNKHSNEIERVAGIYSDITVQRQLEDEVNLLA 943 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 104/589 (17%), Positives = 203/589 (34%), Gaps = 27/589 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + L + R +++ A+ + + + + + Sbjct: 253 RADGTITGLLALMHDQPREISATERAVIALFAARAGTELARHQAEEQLQLIDQVFEGSRD 312 Query: 224 SVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 ++++ +L + I+GY + + + A+ + Sbjct: 313 AIIITDAQTRILQVNPAFEAISGYREEELVGRTPRLLQSGHQGPRFYREMWEALKSRGHW 372 Query: 276 NYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 + Y ++ + + + + + A D LT Sbjct: 373 QGELWNRRADGETYPSLLSVSAVTNDNDEVTHYIGIASDITSHKAAEQHIDYLAHYDTLT 432 Query: 333 LLPNFRALEQAP-------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 L N R LE+ + L +D + ++ G + + L Sbjct: 433 GLGNRRLLEEELERMLRNARGGRPFALFFLDLDRFKNINDTLGHESGDRLLEEVADRLRD 492 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWG 442 L L ++ G E ++ G + L SR L + Sbjct: 493 LAGPQATLCRIGGDEFAILAPGLSHRQTAG-IARQLVEGISRPYEITERPLVVTCSVGVA 551 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + L+ AH E ++ +++ L N +R AL +G Sbjct: 552 VHPRDGTRREALISAADTALHYVKAHGSNH-YQFHEPGMTAAAAERLHLENDLREALLRG 610 Query: 503 DLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + LY QP+ + G + +L + G++ PD+F+PL + L VL Sbjct: 611 EFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRFIPLAEETGLIRPIGTWVLREA 670 Query: 560 LKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 A G SVN+ + + + + + ++P A++LEITE Sbjct: 671 CAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPDALVLEITESVLMH 730 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + ++ + +L G +++DDFGTGY++ LKR D +KID FV+D+V + D Sbjct: 731 GSANTETRLRELKAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVRDMVRDEHDRT 790 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + +++ + L VVAE VE+ + LL + +QGY RP P Sbjct: 791 LAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPA 839 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 31/133 (23%), Gaps = 10/133 (7%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 E L L + + + GY V + L Sbjct: 22 HRVLEASPAVTYALTRDGQSLRPVYISAHIEELLGYPVADWMADPQFWRQCLHPDDRERV 81 Query: 267 WAVST----LCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLN 319 A S L+++ + + L ++ + + + + + Sbjct: 82 LAQSARHLPEGLVDHEYRVRHRDGSYRWVHDRLRLMPARDGRPAMAVGVWQDITHRARAD 141 Query: 320 RRWHLQALTDPLT 332 R + LT Sbjct: 142 RLLRTLSH---LT 151 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 108/626 (17%), Positives = 207/626 (33%), Gaps = 25/626 (3%) Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY 185 P + S FP+ ++ ++ + Sbjct: 406 LAESTTRPWHAGARKFGWRSAAAFPILRGGQVHLVLNLYD-TNVQGFDVKMRDLITEMVA 464 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIA 240 + R A E + + + LL + Sbjct: 465 DIGYALDRIDLVAEQARTSAALRESEVKYRKVLETSQDGFWLLNRDWLLTEVNDAYIEFS 524 Query: 241 GYLVPVFFIIFT-LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 GY + + + + + Sbjct: 525 GYRREELVGMHVTQLDASDASEMARHIASAVEDGNATFETRHRTKSGELKPVEVSVTFDA 584 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKS 351 + C VR R + + D LT LPN Q S Sbjct: 585 GRAACFSLFVRDLSRRDEAQEHIRRLSHFDTLTGLPNSSLFADLLRQAIGNAQRSGESLS 644 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + ID+ + ++ G + + I + L +L G E L++L + Sbjct: 645 VMYIDIDHFQHINDTLGHRIGDRLLVEIAGRFRNALCAENTLARLGGDEFLILLPHAQ-V 703 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 H+ L + + + + + + + E + LL + ++ + Sbjct: 704 ECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRADTATNRAKSD 763 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN----KEGEGYDEILA 524 + ++ + L +R AL++ +L+L+ QP + G + ++ Sbjct: 764 GRN-TYRFFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIR 822 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 + G+++P +F+P+ L V+++ L L + VNL Sbjct: 823 WQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQ 882 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q+N+ + R+ + + LE+TE + +++ ++ LH+ G R++IDDFG Sbjct: 883 FRQQNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFG 942 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR + D +KID FV+D+ + IV +I LA+ +AE VE + Sbjct: 943 TGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPE 1002 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L G Q +QGYL RP P + Sbjct: 1003 QLAFLRASGCQEVQGYLFSRPLPPDE 1028 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 96/553 (17%), Positives = 199/553 (35%), Gaps = 30/553 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 ++ E R + + ++++ V Sbjct: 151 TDITERKKTEIALQQSEHRLSQIITTISDGLIVVDYEG----------TVKFVNAATEKL 200 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-LLYMVRIYH 313 G+ + ++ + + ++ + L +R Sbjct: 201 FGRTKQELIDQKLGIPFVDGDRTEIYIRHSNGHLIIAEIRISEITWKQENAYLISLRDIT 260 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMS 364 +++ + A DPLT L N L + + + L +D+ + ++ Sbjct: 261 DRKYITDQLQYHATHDPLTDLFNRNFLLEKLQNLLEKNKNQSGKSFAILFLDLDDFKVVN 320 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + I + L + +N L + G E ++L + + Sbjct: 321 DSLGHLAGDQLLIMITKRLQNSLGQNHTLARFGGDEFTILLENIKETQDAIIAAQKIHSN 380 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + N + + + +L QS + + Sbjct: 381 LTYPYNLNGQQIFINTSIGIALSSPDYTHPYEILRDADIAMYQSKKQGKGAC-TLFNQQM 439 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 Q K++ + +R A++Q + + + QPI + + G++ ++ G+++P +F Sbjct: 440 HEQAVKRLQMEIELRQAIEQQEFIAHYQPIFSLTTGKLIGFEALIRWQHSQKGLISPAEF 499 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIR 595 +P+ + L +L L + SVNL L + I + Sbjct: 500 IPIAEETGLIVPMGKWILLEACTQLKQWQEQYDHEHILQISVNLSSKQLRDPYLVQEIDK 559 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + I+PQ + +EITE N +++M + QL + ++ +DDFGTGY++ L R Sbjct: 560 ILTHTEINPQNLKIEITESLLMENFDTAMNILLQLQERNTQLCLDDFGTGYSSLSYLHRF 619 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 DI+KID FV + + + I+R+I LA + ++ V+AE +ET+ Q + L L + Sbjct: 620 PVDILKIDRSFVMQMHSGNNNLEIIRTIITLAHSLNMRVIAEGIETESQLSQLKSLNCEQ 679 Query: 716 LQGYLIGRPQPLA 728 QGYL +P P Sbjct: 680 GQGYLFSKPVPQE 692 Score = 61.5 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 12/154 (7%), Positives = 34/154 (22%), Gaps = 7/154 (4%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + + F ++ +S + ++ A + W +L + D Sbjct: 12 LLSQYFLSISEDTISLQKIENGIKQSQAQLKSILDSLKDIVWSVSLPSFQYIYLNKTAED 71 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSLAF 293 + F N+ + ++ L Sbjct: 72 IYGISISEFFKNSNLWLEMVHPEDRSNIKQLARNWDQSDINKDIEYRIIRPDGQIRWLHN 131 Query: 294 ILAVLISF---SVCLLYMVRIYHRSEWLNRRWHL 324 + V+ + V L ++ + Sbjct: 132 RIQVIYNEQKKPVRLDGIITDITERKKTEIALQQ 165 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 98/585 (16%), Positives = 193/585 (32%), Gaps = 35/585 (5%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-- 233 + +++I +R E+R + A + + Sbjct: 231 TYEVTIHLLQESQLIRCYLTDITERKRSELALRISEERYALAAEAANDGLWDWHIGNRSV 290 Query: 234 ---YENDFIAGYLVPVFFIIFTLGVGK-LRYPFLNLTWAVSTLCL-----LNYNQNFLQG 284 + + G + L + + Sbjct: 291 YYSPRWELLIGEPPGSLQPTIEEWWRRVHPDDLEQLRQNIKEHLFGSRPCFDCEFRIRHR 350 Query: 285 VETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + L + + + + + AL D +T L N L Sbjct: 351 DGSYRWMRSRGKALRNQKGQPYRMGGSMTDVTEYHLIQEKILHDALHDAMTGLANRVLLI 410 Query: 342 QAP------EQEAG---KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 Q + L +D + ++ G + + I + L + + Sbjct: 411 DRLTQAIARRQRRPNSLFAVLFLDVDRFKVINDSLGHLAGDQLLIGIGQRLRACTRPEDT 470 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD-GNQ 448 + +L G E ++L + + + R + F + Sbjct: 471 IARLGGDEFAILLEDLSDPAQAMKVAERILMVLGRPFLLEGHEIFTTASIGIA-FPWEDS 529 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 +T + LL ++ + + + QT + + +R A ++ + L+Y Sbjct: 530 QTAEDLLRDADTAMYRAKSLGKAR-YEVFSMTMRAQTIALMQMETELRRAAEREEFLVYY 588 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + + G++ +L + GI++P +F+ + + L V+ + + Sbjct: 589 QPIVDLATLKMVGFETLLRWQHPERGIISPGEFMAVAEETGLILPISWWVMAEACRQMQR 648 Query: 566 HPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 R VNL Q ++ + + Q + LE+TE N E Sbjct: 649 WAVIFPRSRKLRIGVNLSGRHFQQADLLPNLRSILAETGFPAQRLCLEVTEGILIDNKEV 708 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ +E++ G +++DDFGTGY++ L R D +KID F+ + + A IV + Sbjct: 709 AIATLEEIRAMGIGVSMDDFGTGYSSLSYLHRFPIDTLKIDRTFISALNSEESSATIVHA 768 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 I LA + L VVAE +ET++Q L LG Y QGY RP Sbjct: 769 ILMLAHSLRLQVVAEGIETREQYRALQALGCNYGQGYFFARPLSA 813 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 114/634 (17%), Positives = 224/634 (35%), Gaps = 33/634 (5%) Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLK--ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 L P + L + + FF V + + Sbjct: 410 VLHANAPARLWIGERLADPWALGLDSHVRARFFQQLQDRDAVDEFEVHWRGPTEAVWAVL 469 Query: 185 YLTRMIVSPHFAQILWRR---DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEN 236 R++ A + + + + + ++ + ++ +L + Sbjct: 470 SARRIVFQGRDAVLTTLAPINHLKQLEQRLELWAKVFETSSEGIFIVDAQQRILTANWAL 529 Query: 237 DFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 G+ + L R + +L V T + +Y Sbjct: 530 TRSTGHDLIELMGGDPAELLAGADARQTWQSLVERVQTRGSWQGEVRICRRAGGDYPAWL 589 Query: 294 ILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----- 345 + + + + + RR A D LT LPN + Sbjct: 590 LANAVRDRAGHVSHWVCTSIDITDRKESERRIRFLAEHDVLTELPNRALCIERLRLALQQ 649 Query: 346 ---QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + +D + ++ G + +RS+ + L+ ++ + + +L G E + Sbjct: 650 ARRTGQKVAVLFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFV 709 Query: 403 LVLSGPETEGRLQHMVN-ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +VL+G + H+V L + + + F + + + L+ Q Sbjct: 710 VVLNGLADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQA 769 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 Q+ A A ++ + ++++ N +R+A+ QG L L+ QP + Sbjct: 770 DVAMYQAKAQGRNGA-QFFTAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGR 828 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPR 574 G + +L + G + PD+F+P+ + L V+E+ + Sbjct: 829 VAGVEGLLRWHSPELGHVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVA 888 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 S+NL L L + + +R+ + P + LE+TE ++ + + L + G Sbjct: 889 VSINLSALQLRDPGLLDVLRASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELG 948 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 R++IDDFGTGY++ L R D +KID FV+D++ + D I+++I L L V Sbjct: 949 LRLSIDDFGTGYSSLNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKV 1008 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VAE VE + + L G LQGY RP Sbjct: 1009 VAEGVERELEVQALRAAGCDELQGYHFARPMAAD 1042 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 111/721 (15%), Positives = 235/721 (32%), Gaps = 39/721 (5%) Query: 42 IFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCAC 101 + + +++ + + G A + + ++ Sbjct: 58 VAGFQSAMAELITAPGLIEVDFRALLDDGDIRWYRAIGRSYASPDASVTHAAGVLLDVTT 117 Query: 102 AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDAD 161 Q + ++ + + + G + D Sbjct: 118 QRSAEQYYDAFFQQPNGMHLVASIDGE-IRLTNSAWQLVLGHGDAELQGQNLLDLVHPED 176 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH----FAQILWRR----------DIAPS 207 T+ ++ L + Y R A + Sbjct: 177 REATLAEMGKLSQGMYTLYFENRYRHRDGSYRVIAWSAATAERESVICAVGRDISQEHAA 236 Query: 208 LGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIF---TLGVGKLR 259 +A + + +L+ + I GY Sbjct: 237 RRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQPTSLLRSGRHDG 296 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 + ++ + + + T + ++ + + + + + Sbjct: 297 DFYADMWQTLQRDGVWRGEIWNRRKSGTVFPELLTISKIDGPDGGFMAIFTDISQLKETE 356 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMM 371 + A DPLT LPN + + E + L ID+ + ++ G Sbjct: 357 EQLQKLAHYDPLTNLPNRFLVNECLEHSIRRAQRRSDHLAVFFLDIDSFKNINDSLGHFA 416 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 +++ L L+++++ + ++ G E L+VL T H+ + + + Sbjct: 417 GDKLLKTTANRLKALLRDDDSVGRIGGDEFLMVLDDISTPDDATHIAEKIIGALRKPMIL 476 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + + +T + L+ + E ++ Q + Sbjct: 477 EGRSISVSASIGISIYPEDGQTAETLMSNADAAMYNAKDQGRD-TFRFYSEHLTRQAFQN 535 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 VL+ + +R A+ + + L QP N G + +L G ++P +F+P + Sbjct: 536 VLIDSALREAVSRQEFRLAFQPQVNTDNGSLLGLEVLLRWHHLTLGTVSPSQFIPQAERT 595 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VLE + + +VN+ ++ ++ ++ P Sbjct: 596 GLIRDIGHWVLEQSCLQGSRWIAEGLQFGHLAVNVSAPQFRAEDFVAQVRKVLADTEFPP 655 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LE+TE + E + N+ +L G AIDDFGTGY++ LKR+ D +K+D Sbjct: 656 EKLELELTESVLVHDTEKLIENMHELRALGVMFAIDDFGTGYSSLSYLKRMPIDRLKLDK 715 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV IV++ D +I ++ L KA L V+AE +E + Q +L LG ++ QGYL GRP Sbjct: 716 SFVDHIVSDDSDRIIAGAVLALGKAMGLPVIAEGIEQEAQARVLQSLGCKHFQGYLYGRP 775 Query: 725 Q 725 Sbjct: 776 M 776 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 116/608 (19%), Positives = 210/608 (34%), Gaps = 37/608 (6%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 D + + D + + R+ + R + + Sbjct: 215 ADIEYRWRRPDGEVRWMRSRVRRARSGDGMRVEMGVVQDVTEEHRSAEQLREQLLFIQRI 274 Query: 218 SWLAALSVLLLLL---------CTPYENDFIAGYLVPVFFIIFTLGVG-----KLRYPFL 263 + + + G L + + Sbjct: 275 ASRIPGFIYEYRMHNDGASSVPYISDAVREFMGVNPEDVMRDHGLLMRSVVPDDAAHVRR 334 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRR 321 + ++ L + ++ + + Sbjct: 335 SAVASLRNLAPWQCEYRVSMPDGSVRWHITNAIPHREPDGSVVSHGFTMDITDRKRAEQE 394 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRV 373 A D LT LPN R L ++ + + +DN + ++ G M Sbjct: 395 IERLAFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLNDTLGHDMGD 454 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQ 425 H + + LL ++E + + + G E +++L E + + + L + + Sbjct: 455 HLLSQVAARLLACVRETDTVARFGGDEFVVMLETLRPELTEAASQAEIVAEKLLASLNQP 514 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 F + ++ LL + Q+ + + Sbjct: 515 FALGGQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQAKGAGRNTQ-RFFDPDMQAAV 573 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 + L +R L +G+L +Y QP+ + G + ++ G+++P F+PL Sbjct: 574 NARSNLEADLRQGLARGELCVYYQPVVDHRARLLGVEALVRWRHPVRGMISPADFIPLAE 633 Query: 544 QFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 Q L QVL++ L + SVN+ Q +++ + Sbjct: 634 QTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQGCG 693 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 P+ + LE+TE + E ++ +EQL + G A+DDFGTGY++ LKRL D +K Sbjct: 694 ADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLDQVK 753 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D++T+ DA IVR+I LA++ L VVAE VET Q A L G + QGYL Sbjct: 754 IDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLF 813 Query: 722 GRPQPLAD 729 GRP P+ D Sbjct: 814 GRPGPVED 821 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 24/248 (9%), Positives = 50/248 (20%), Gaps = 17/248 (6%) Query: 108 LGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVG-SFFDFPLKISTFFGDADAIFTV 166 LG G+ + V+ +L +V +G + + + V Sbjct: 45 LGRVRTRGVDADEVFDQLRGTAIVEQLGAVARLGVPLECRPVVREPGRPVLAWELSARRV 104 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA--PSLGKEKRAFTLSWLAALS 224 + T + + + E A T W Sbjct: 105 AGCSIMVTVRDVSEVETLRAALAACERSLEETRRELREQSDVFNTMEGLARTGHWRRIED 164 Query: 225 VLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 +L IAG+ + G L A + + + + Sbjct: 165 PGETVLLWSPGLCDIAGFDRQEWVSPERAVSGILPEDRHVFEKAREKVAGADIEYRWRRP 224 Query: 285 VETEYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + S + +V+ + Q Q Sbjct: 225 DGEVRWMRSRVRRARSGDGMRVEMGVVQDVTEEHRSAEQLREQ------------LLFIQ 272 Query: 343 APEQEAGK 350 Sbjct: 273 RIASRIPG 280 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 106/622 (17%), Positives = 203/622 (32%), Gaps = 30/622 (4%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + + I F+ + + R + Sbjct: 344 WTRVAMALMACLRQSGDGRRRETWSEIQGRTGRNVTFSMAFGVSQMRLGDRRTAICVVQD 403 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYL------VP 245 ++ E+R V + E + GY Sbjct: 404 ITRRKQAEQALRDSEERLKLAVRATRSGVFDVDYANGIFWWSPEFIEMLGYEGSPPGQAD 463 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC- 304 + F + + + + + + Sbjct: 464 LLFREILHPDDRPAALAQIERYLAGKSGDYHAFYRLRHRDGSLIWIEARGQAIRDDRGRP 523 Query: 305 --LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + + + + + DPLT LPN L+ + + Sbjct: 524 VRITGTMTDVTDRKRFEEQLMYVSTHDPLTGLPNRTLLQDRLQHAADQAERKGNSVAVLL 583 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + +R+I + L ++ + + +L E L++ Sbjct: 584 LDLDRFKLVNDSLGHQVGDKLLRAISQRLASSVRPADTIGRLGADEFLIIAEDLTEPQMA 643 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + S+ + L + F G+ + LL + + Sbjct: 644 ARVAETVLAGLSQPFGLDGQQLFITCSIGITLFPGDATDIGALLRDADTAMHTAKSAGGN 703 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 ++ ++ L + +R A+DQG L+ QP + + G + +L Sbjct: 704 -GYRFFTPEMNEAAVARLSLEHALREAIDQGQFELHYQPKASLETMQTVGVEALLRWRHP 762 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 + G++ P F+P+ + + VL + L+ + +VN+ + Sbjct: 763 EMGMIPPSTFIPVAEETGMILAIGDWVLRAALEQINRWERAGLEPLPVAVNVSVRQITSS 822 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + A RI L Y + P + LEITE SN + +L G RIA+DDFGTGY+ Sbjct: 823 HFADRIQSLLDEYGVRPDLLELEITETAMMSNMAFIADGLAELRGRGIRIAVDDFGTGYS 882 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+RL +K+D FV + +N I +I + + L+VVAE +ETQ+Q Sbjct: 883 SLSYLRRLPITTLKVDRSFVSEAPSNADTGAIAATIIAMGRQLGLTVVAEGIETQEQLDF 942 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + QG+LIG P P A+ Sbjct: 943 LRRHRCHEAQGFLIGFPVPAAE 964 Score = 61.9 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 25/234 (10%), Positives = 61/234 (26%), Gaps = 18/234 (7%) Query: 105 RWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF 164 R+ + + L+ LGL T + + + + F I+ A Sbjct: 185 RYVIAADFFRRAELVLATSALWMLGLATALAVMLYLSITKPFLRLAGAIAEVDPAQPAGR 244 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 + L ++ + + RR A +E R + A Sbjct: 245 PLTVPSHHADDELGLLARIT--NDLLTQFDRSLVERRRAEAALRERETRLSGIMDNVADG 302 Query: 225 VL-----LLLLCTPYENDFIAGYLVPVFF------IIFTLGVGKLRYPFLNLTWA---VS 270 ++ L + + G+ +I ++ + Sbjct: 303 IITLDEDLRIETMNRAALELFGHAAADVVGKPFVTLIDEGDWTRVAMALMACLRQSGDGR 362 Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWH 323 + G +S+AF ++ + + +V+ R + + Sbjct: 363 RRETWS-EIQGRTGRNVTFSMAFGVSQMRLGDRRTAICVVQDITRRKQAEQALR 415 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 102/593 (17%), Positives = 201/593 (33%), Gaps = 38/593 (6%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 +F + +S + + + R I A+ + Sbjct: 480 GVFWGLATISPLWDQGEHPESYLAVVRDITVAKKAEEKLLLAAK-----------VFENT 528 Query: 222 ALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLC 273 +++ + I GY ++ + + ++ Sbjct: 529 VEGIVVTNTEGTIEQVNPGFTVITGYSADEAVGSNPRILKSDRHAQHFYQEMWTKLTQDG 588 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + Y ++ + + + + + QA D Sbjct: 589 HWAGEIWNRRKDGESYPEWLTISAVKNEAGQTTNYVSIFHDITELKRQQDALEYQAQHDA 648 Query: 331 LTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT +PN L + +DN + ++ G + + + R Sbjct: 649 LTGMPNRILLGDRLRMALAQLARSGGKLALLFFDLDNFKTINDGLGHGVGDELLVDLSRR 708 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGA 439 L L++ + L +L G E L++L E+ H+ + H + + Sbjct: 709 LERLLRSGDTLARLGGDEFLILLPEIESVDAASHIATRMLDALKAPFHHGDVEYFVTASI 768 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + L+ ++ + + +++ + +R A+ Sbjct: 769 GLTIAPDDGNEAPKLIKNADMAMYRAKSMGRN-NYQYFTPEMDVAAHRRISMEYKLRKAI 827 Query: 500 DQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 + + L+ QP+ + G + ++ +G +++P +F+PL + L VL Sbjct: 828 EAQEFELFYQPLVHIQSGHILGAEALIRWRC-EGKLISPAEFIPLAEESALILPLGDWVL 886 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + SVN+ ++A + + + P + EITE Sbjct: 887 RTAAHQAKLWQDAGHDLTMSVNISSRQFSGADLAVTLREVLLDTELRPGRLYFEITESML 946 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + + + L + G +DDFGTGY++ LKRL D +KID F+KDI ++ Sbjct: 947 MGDVSKAETTLLNLREAGGTFFLDDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITDDSDS 1006 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV +I +A+ +L +VAE VETQ Q+ LL +G LQGYL RP P D Sbjct: 1007 RAIVAAIVSMARTLNLRIVAEGVETQAQRGLLASMGPIVLQGYLASRPVPAQD 1059 Score = 67.3 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 20/177 (11%), Positives = 46/177 (25%), Gaps = 20/177 (11%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 A + + LF I MLF++ TR+ + A E+ Sbjct: 349 QAIRTTLIALGVFLFVGTGITAMLFFFNTRLSRQV-------QERTAALSASERSFRAFF 401 Query: 219 WLAALSVLLLLLC------TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 +A++ V + + GY + + + S + Sbjct: 402 EMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAAELGTLSPRDLVHPDDWQASEEAMKSLV 461 Query: 273 CLLNYNQ----NFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRW 322 +++ + ++ L L +VR ++ + Sbjct: 462 TKEQKEITLEKRYVRKGGGVFWGLATISPLWDQGEHPESYLAVVRDITVAKKAEEKL 518 >UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CH18_SHEPW Length = 1073 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 93/641 (14%), Positives = 217/641 (33%), Gaps = 41/641 (6%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 L ++ LV + Y+ S I + + L Sbjct: 421 LIVSSLYISFLSGVLVFYMVFILGKYIANSLISSITTIVNDVEEMAKDPNLQ-LNIEIKG 479 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LL 230 + L +M+ A+ ++ A + ++ +++ + Sbjct: 480 NDELTQISTALNQMLSERMLARTSLQQASA-----------VFEHSSEGIMVTNADNRIE 528 Query: 231 CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 I GY + + L +++T + Sbjct: 529 LVNPAFTKITGYTLEEVKGQKPSVLSSNHHQPEFYSQLWHSITTTNHWEGEIWNKRKDGN 588 Query: 288 EYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 Y + + + + + + ++ D LT LPN Sbjct: 589 VYPEYLSITAVENAQGQISQYIGLFLDVSNHKQYEQDLWYKSNYDSLTKLPNRHQFSSRL 648 Query: 345 EQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + + + +D +F++ +G ++ L ++ + + + Sbjct: 649 QHAIDGASQTNSQVAVFFIDLDRFKFINELHGHAAGNEILKQSATRLESVLGPEDSIARF 708 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++ + + + L + + + ++ + + + ++ Sbjct: 709 GGDEFVIISPQHNAIETAEQLAHKLVDVLVQPLKLDAIESNISASVGIAFYPEDGQDIEM 768 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL Q+ ++ + +++ L +R A+ + + L QP+ + Sbjct: 769 LLRNSETAMYQAKRDGRAH-FQYFSPEMNVEMLERMQLEQRLRKAVKKSEFYLEYQPVVD 827 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + ++ + GI++P F+P+ + L VL L L++ Sbjct: 828 MTHGTVSSVEALIRWRDPEFGIISPALFIPIAEETGLIEPLGEWVLNQALADLSSWHAQG 887 Query: 571 KGPRFSVNLMPLTLLQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + ++N+ + N + R+ I+ V +EITE + S+ + Sbjct: 888 HMLKIAINVSGRQCINSNGLSFYQVLEEALLRHKIAAHYVHIEITESLLIEDKPYSLEIL 947 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + + G I +DDFGTGY+ L + +IKID F+ + + DA +V++I + Sbjct: 948 QSIRNLGVDIYLDDFGTGYSALSYLNQFPISVIKIDKSFIDNATVSQSDAKLVKAIVMMG 1007 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +++VAE +ET++Q L LG Y QGYL+ +P Sbjct: 1008 QSLEMTLVAEGIETEEQWDFLQSLGCNYAQGYLMSKPLSSE 1048 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 103/569 (18%), Positives = 208/569 (36%), Gaps = 33/569 (5%) Query: 190 IVSPHFAQIL-WRRDIAPSLGKEKRAFTLSWLAALSVLLLL------LCTPYENDFIAGY 242 I + + ++ + + SV++ + I Sbjct: 308 ITEFNQRLTESVHQKTRQLTHQKYFLQNVIDGVSDSVVVYDKNLSITMKNKAAEQLIGLT 367 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + + + + +F+ +T F + L+ S Sbjct: 368 SSSKQYSHGVNENNQNHDYLETVIKCLKSAKPEKTVHHFIDQNQTSRYFEFTVTPLVDGS 427 Query: 303 VCLLYMV---RIYHRSEWLNRRWHLQ-------ALTDPLTLLPNFRALEQAP-------- 344 L ++ + + Q A DPLT LPN Sbjct: 428 GQLNSVIQLGHEITNYLDIQEQLQQQKNDLDFIAYHDPLTDLPNRILFLDRLTQAIHQAQ 487 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +D + ++ +G + + L ++E + + +L G E ++ Sbjct: 488 RNHDKVALLFIDLDRFKEINDSFGHASGDLVLIECGKRLKKAIREIDTVARLGGDEFTIL 547 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + +T + ++V + S I N + F + LL Sbjct: 548 IDELKTNNVIINVVKKIIKTLSDPIFVNENIFHITASIGISIFPNDGTDANQLLQNADAA 607 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 Q+ + ++ Q ++L+ N +R ALD LY QP + + G Sbjct: 608 MYQAKEDGKN-TYHFYTKEMTEQAYNRLLMENNLRDALDNQQFELYYQPQVDITTNKIVG 666 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 ++ ++ GI+ PD F+PL + L Q++ + ++ R ++ Sbjct: 667 FEALVRWNHEQKGIIPPDHFIPLAEETGLIIPLGKQIIAMASQTISEWHQANLTNARIAI 726 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L + + + P + +EITE N E ++ + +L + G I Sbjct: 727 NVSAKQLRDSRFFHNLNTALNKNNCQPDWIEIEITESSVMQNPELAIKLLSKLRRKGITI 786 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFGTGY++ LK+L +KID FV ++ + DA I ++I ++++ +L ++AE Sbjct: 787 SIDDFGTGYSSLAYLKKLPITKVKIDRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAE 846 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +ETQ+QQ + + G + +QGY RP Sbjct: 847 GIETQEQQNFVLQEGCKLIQGYYYSRPLT 875 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 99/445 (22%), Positives = 188/445 (42%), Gaps = 16/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + L+ M +R A D LT LPN L+ + Sbjct: 125 GKPLYLIGMFVDITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVA 184 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G + ++++ + +++ + + + G E +++LS E+ Sbjct: 185 LLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLESA 244 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + L + F + E + LL + + Sbjct: 245 FDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKKN 304 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + + ++ Q ++ + +R AL + +LLL+ QPI N + +G++ +L Sbjct: 305 GRNNC-EFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRW 363 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 G++ P KF+ L + + ++ + R ++NL + Sbjct: 364 QHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQF 423 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 QK + I+R+ ++ + LEITE + + E ++ + QL + G I+IDDFGT Sbjct: 424 RQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFGT 483 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+N LKR Q + +KID FV+DI + D I+ +I +A A L V+AE VE +QQ Sbjct: 484 GYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQ 543 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 A L G QG+ +P P + Sbjct: 544 LAYLALHGCTRFQGFYFSKPLPAIE 568 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 114/715 (15%), Positives = 226/715 (31%), Gaps = 44/715 (6%) Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG- 115 + G G + G L L F + +G G Sbjct: 203 MVAGVLGRHGLKLGALAMVLPLLSLWFFWQVYRALGFIVQSDARIRAIYEAIGDAVLVGD 262 Query: 116 ---------LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 T++ + I +Y V + D I Sbjct: 263 RQGRVESINATAQRLLGWTEAEARGKLISDVFELYDVHHQQRVESPAESVLRDGIPIPMS 322 Query: 167 -VDLLSLFTAVLIYNMLFYYLTRM-------IVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 LL + R +V + + TL Sbjct: 323 NGMLLRRRDGSQLAVEDSAAPVRDEHGNAVGVVMVFHDVSKRYALLDELGAARAQFETLF 382 Query: 219 WLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLG--VGKLRYPFLNLTWAVST 271 VLL + E + Y ++ + + Sbjct: 383 EQLPEGVLLFDESLAVITHNREAANLLEYASDALLLLQVSDIEAMDDQNAIAARKEKLQL 442 Query: 272 LCLLNYNQNFLQGVETE--YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + N+ + ++ + L + + + R + + + A D Sbjct: 443 TGIDNFESRYRTRSGRLMDVDVSVQVVQLPNGRIAFQTLFRDITEQKQTSAQIEHLAYHD 502 Query: 330 PLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN R L+ ++A + L +D+ + ++ G ++ + Sbjct: 503 QLTGLPNRRLLKDRLSQAVSSVVRRDAKLALMYLDLDHFKDVNDSLGHGAGDVLLQIVAE 562 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 L ++ ++ L ++ G E +L+L+G + + + S+ + N L + Sbjct: 563 RLQGCVRADDTLARMGGDEFVLLLNGVNGADDVASIAGKIIHELSQPMRIGNDELRITPS 622 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + LL Q+ + + Q+ ++V L +R A Sbjct: 623 LGISMCPQDGRDADDLLKYADVALYQAKQQGRA-TYRFYTQALHDQSVERVQLERLLRHA 681 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L++ + LY QP + G + ++ G ++P +F+P+ Q L V Sbjct: 682 LERNEFELYYQPQVDLCDGRIIGCEALIRWNHPGMGQVSPARFIPIAEQSGLIIDIGNWV 741 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTL-LQKNIAGRIIRLFKRYHISPQAVILEITEE 614 ++ + S N+ + + + P + +E+TE Sbjct: 742 MKQACHQAKRWHDQGWDIKVSFNVSARQFMRSGELMQSLRDALAESGVDPTRMEVELTES 801 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + + + ++ G ++A+DDFGTGY++ L+R I+KID FV N Sbjct: 802 LLL-DPQGMGEILHEIRALGIQLALDDFGTGYSSLSYLRRFPISILKIDRSFVSAADNNA 860 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA +V++I +A +S++AE +ET Q+ +L G + QGY P P + Sbjct: 861 DDAEMVKTIIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQGYHYSCPVPATE 915 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 123/692 (17%), Positives = 232/692 (33%), Gaps = 38/692 (5%) Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 L + + Q + ++ L + R + L Sbjct: 13 AYPGLQILLIADPTLAVLLQPLLAQSLLEPVQIVPIHPPEAALAQLHQADRSELILLDLA 72 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + + I ++ L + T L + L L R + Sbjct: 73 LSENLDCLSTLHQHAPHVPILVLLEESQTGIAEQTLSAGATDYLFKSELTPSLLRRSLRY 132 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL---------------LCTPYENDF 238 +++ A E R F + + ++ +L + Sbjct: 133 ILHGTEFQQVEANLRQSEARFFAAAEASLDALFILQSYRHPEQNQIIDFVCTDVNSRGEK 192 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + G F + + + + + L T + ++ + Sbjct: 193 LLGKPRQAILGRFLSELLPVDSSKQLIQKYTLVVETGQVLEEELPVNITPLPITWLHHQI 252 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAG 349 + + R + H QA DPLT LPN Q+ Sbjct: 253 VPLGDGIAITARDISERKQKEAELHRQAFYDPLTELPNRTYFMNRLTKVLERAGRRQDFH 312 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G ++ +++I R L ++E + + +L G E ++L Sbjct: 313 YAVFFLDLDRFKVVNDSLGHLLGDEFLKAIARRLSSCLREEDMVARLGGDEFAILLEELS 372 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + L S L E + +L Q+ Sbjct: 373 NPDIVHRIAERLQRVLSAPFTLKQHELFTTASIGIALGTSYYEQPEAILRDADIAMYQAK 432 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEIL 523 + ++ + + K+ L + +R A+++ + L QPI + G++ ++ Sbjct: 433 TQGKARHI-IFDQAMHTRAVKRWQLESDLRWAIERREFCLVYQPIVSIQTERLIGFEALV 491 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-------KGPRFS 576 G ++P +F+ + + L VL + L S Sbjct: 492 RWHHPQRGWISPAEFISVAEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVS 551 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q ++ I ++ ++ + + LE+TE N ++ + QL + G + Sbjct: 552 VNLSSKQFCQPDLIHYIQQVLQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGIQ 611 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY++ L R D++KID F+ I T + IVR+I LA++ +L VVA Sbjct: 612 LALDDFGTGYSSLSYLHRFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVVA 671 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VETQ Q L L Y QGYLI RP Sbjct: 672 EGVETQAQLDHLQALQCGYAQGYLISRPLTPE 703 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 115/744 (15%), Positives = 236/744 (31%), Gaps = 41/744 (5%) Query: 25 IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVP----VLCGMFCTNLWNFH 80 I R P I + +L + + L G P + L + Sbjct: 184 IAYVRRFEPFDWIIGAGEYLYQIEADLQAEALKRIGAISFHPDGVIGVTTADGRILVEPN 243 Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY-----GLTSRYVWQRLFWLGLVTPIG 135 L +A G + A R + QR + Sbjct: 244 LLAQPSARHAGLPEQPAVPWTAAAREVIQRNGGGRLQFSLPGPDGRAQRRLGYAVEHAGW 303 Query: 136 IKCSMY------LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 + L + ++ ++ ++ AV++ ++ R Sbjct: 304 QWYLVASVGLDGLDAALEHERDEVRNTARHRLEFTLLLLAVASTVAVIVSLAFSSWIGRR 363 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLV 244 S + + + A + ++++L + +AG Sbjct: 364 FASYRGEIAQRNAALEAKNRELQLAARVFECGNEAMMVLDADHRFITVNSACAQLAGLDA 423 Query: 245 PVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--- 299 L + + ++ + + ++ ++ Sbjct: 424 AALRGRPAAQLLNDHDGAGWERIARELAEQGAWSGEVTVRREDGPTLPAQLSVSAVLNSA 483 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-------- 351 + + + + A D LT LPN L + Sbjct: 484 GGATHYVGALTDMSAHKQTEALLRHMAEYDALTDLPNRSLLHDRARAAIQGAARTDRLAA 543 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + +R + L L+ + + + G E +++L+ Sbjct: 544 LLFIDLDRFKNVNDSLGHSVGDALLRQAAKRLASLLHGGDTIARPGGDEFVMLLAEITDR 603 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + S + L + + LL + Sbjct: 604 AVAANRAAQIIDAFSTPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKES 663 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 + +S + +++ L N +R A+ + + ++ QP + G + ++ Sbjct: 664 GRN-TYRFFTDEMSLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRW 722 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTL 584 + G++ P++F+PL L +VLE+ +VN P+ + Sbjct: 723 RHPERGLIAPERFIPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQI 782 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 N A + + + + + +E+TE ++A + L G R+AIDDFGT Sbjct: 783 HHGNFAETVAEVLAETGLPARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGT 842 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKR Q D +KID F+ D+ + DA I +I +A++ +SV+AE VET Q Sbjct: 843 GYSSLAYLKRFQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQ 902 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 + L G QGYL P P+ Sbjct: 903 ERFLVDQGCAEGQGYLFSPPVPVE 926 >UniRef50_B4RTU5 Sensory box protein n=2 Tax=Alteromonadales RepID=B4RTU5_ALTMD Length = 1510 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 106/581 (18%), Positives = 198/581 (34%), Gaps = 25/581 (4%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 + L ++ RM + + + V Sbjct: 915 QWIWILDRGKVVERDHNEQPVRMTGTLKN-IHHLKEAEEQL----NLFKRSIENISEGVF 969 Query: 227 LL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + + G + + + T + Sbjct: 970 ITNTQFKFISVNNAYCRYTGETREQALASYMHFHLYPDAFTEEIKKTLKTKSNWSGEVES 1029 Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 ++ Y + + + + + + + A DPLT LPN Sbjct: 1030 VRVNGERYEMELNIDAVHDEDGKISHFVGVFSDITSRKSTEKELLKLANVDPLTELPNRS 1089 Query: 339 ALEQA----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + + A S CL +DN + ++ G I+ I + L + +N Y Sbjct: 1090 FFQASHQNLVRKAAQHSLLCLDMDNFKKINDSLGHQTGDILIKQIAKRLQRITGKNATCY 1149 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E +++ + H L SR N +G F + E+ Sbjct: 1150 RLGGDEFSILMEDNADIHTVTHYAQNLLDTLSRPFIINKQEFVLGASIGIAFFPDDGESP 1209 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 Q +L + + + ++ +Q+ + N IR + +Y QP Sbjct: 1210 QEMLKNADTAMYFAKNNGGN-SYQFFSGEMNQNAVRQLQIENLIRQGIKDDLFTVYYQPK 1268 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + + ++ GI++P +F+PL Q QVL Sbjct: 1269 VDIASGKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQIIEIGEQVLRKACADTKRWVN 1328 Query: 569 DKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R +VN+ ++ RI ++ +SP + EITE + E+ + + Sbjct: 1329 QGLFSGRVAVNISAKQFELPDLDDRINKILSDVGLSPLHLECEITEGTLMESPENGLQMM 1388 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L + G +A+DDFGTGY++ LKR + +KID F+ DI + +D + +I ++A Sbjct: 1389 TRLRERGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAFIDDIAKSNVDRHMAAAIINIA 1448 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE VE + Q +L + + LQG+L RP Sbjct: 1449 HNLGLKVVAEGVEEESQLDILRRYDCEMLQGFLYSRPLNAE 1489 >UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A3Q8W6_SHELP Length = 1094 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 114/702 (16%), Positives = 247/702 (35%), Gaps = 45/702 (6%) Query: 60 GWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSR 119 G + + L + H + A + + A L R Sbjct: 389 GRAIIADQAMLAALSQLQHQHPAVASEAWWALATEALGQMNQASLTLSNNIANLVQRQGR 448 Query: 120 YVWQRLFWLGLVTP----IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 L + I +V + I++ + L Sbjct: 449 EALSFLVLGIMAAMCNFLFLIVLGRLIVNNLVTRIGTIASLMQRMAQNTQLQ-LSVPVDG 507 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LL 230 + L M+ A A + A +++ + Sbjct: 508 RDEVAKMAMALNAMLSERQEANRELSLASA-----------VFEYCAEGIVVTDKDNLIE 556 Query: 231 CTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 I GY + + + + + ++ + Sbjct: 557 AVNPAFTQITGYTLEEVKGRSPAVLNSHQQPHHFYEQMWQSLKQYGKWQGEIWNKRKNGQ 616 Query: 288 EYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + V+ ++ + + + ++ D LT LPN + Sbjct: 617 IFPEYLAITVVKDDKGRVVQHIGLFLDISNRKKYEQDIWYKSNYDALTNLPNRQLYTSRL 676 Query: 345 EQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 Q + + +D ++++ YG + ++ L L+++++ + +L Sbjct: 677 SQMLQLAEQRCCSVAVLFIDLDRFKYINDIYGHAVGDELLQVAAARLEALLEQHDFVARL 736 Query: 397 PGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E ++V+ + +G ++ + S N L + + N +++ Sbjct: 737 SGDEFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINRNELLISASVGISCYPSNGTSVEV 796 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L Q+ ++ ++ L ++R+A+ Q + L+ QPI + Sbjct: 797 LTRNAETAMYQAKQDGRN-CFGYFSPDMNNNMLARITLEQSLRSAVLQHEFCLHYQPIVD 855 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 EG + +L G++ PD+F+P+ + L V++ L+ L Sbjct: 856 TSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEETGLIEPIGEWVIQQALRDLRQCHSQG 915 Query: 571 KGPRFSVNLMPLTLLQKN---IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 ++N+ L + A + L ++Y ++PQ V +EITE ++ E S+ + Sbjct: 916 IMINMAINVSGRQLAHGDPSHFACMLNGLLQKYDVAPQYVHIEITESILMADTELSLKAL 975 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + G I +DDFGTGY++ LK+ +IKID FV +++ + DA ++++I + Sbjct: 976 TAIRHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDKSFVDNMLEDRADANLIKAIITMG 1035 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ + +VAE VE++ Q++ L LG ++QGYL+ +P PL + Sbjct: 1036 QSLDMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKPMPLKE 1077 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 102/517 (19%), Positives = 193/517 (37%), Gaps = 29/517 (5%) Query: 239 IAGYLVPVFFIIF------TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + GY F + L +T A++T + Sbjct: 209 LTGYAPEELLGTFNLTYNTLIDPDDLPQLTAAITTAIATQQVYTVEYRIRTKSGQLKWFL 268 Query: 293 FILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--- 346 + L + + + + + A D LT LPN E Sbjct: 269 EQGNGIFDKQGQALGLEGFITDISKLKQAETQLRHDAFYDKLTGLPNRSLFMDRLEYCIK 328 Query: 347 ------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + + L +D + ++ G + I L ++E++ L +L G E Sbjct: 329 RVKRHPDQIFAVLFLDLDRFKVVNDSLGHAAGDQLLVEIAERLTACVRESDTLARLGGDE 388 Query: 401 LLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++L G + + + + + N + + + + LL Sbjct: 389 FTVLLEGIKDLSDALLVCGRIQQSLNCPFNLNGREVLITVSTGVALSTMGYDDPEQLLHN 448 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-- 515 ++ A + + + Q+ L +R A+++ + L+ QPI + E Sbjct: 449 ADAAMYRAKALGKAQ-WEVFTADMHSNASAQLQLEVDLRRAIERQEFQLHYQPIFHLETA 507 Query: 516 -GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--- 571 G++ +L G+++P +F+P+ + L VL+ + L+ Sbjct: 508 AIVGFEALLRWHHPLRGLISPVEFIPVAEETGLILPISWWVLQEACRQLSRWQTQFPLEV 567 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 SVN + + +I + ++PQ++ LEITE NAE++ + ++ Sbjct: 568 PLFVSVNFSSKQFSEVGLIPQIEDILHTTGLAPQSLKLEITESAIMENAEATAAKLLEIK 627 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G ++ IDDFGTGY++ L R DI+K+D FV + + + IV +IT L++ Sbjct: 628 ALGIQLGIDDFGTGYSSLSYLHRFPVDILKVDRSFVSAM-DSHENLQIVHTITMLSQNLG 686 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VAE VET +Q A L + QY QGY +P + Sbjct: 687 MRAVAEGVETAEQAAQLRAMNCQYAQGYFFSKPIDAS 723 >UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T198_ACIDE Length = 948 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 116/733 (15%), Positives = 239/733 (32%), Gaps = 34/733 (4%) Query: 17 AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNL 76 V + L F ++ + + + ++F +R ++ L Sbjct: 210 PLLAAVGTMGLGEFFF---TLYVDAADHFNLLGHIYKLLGYLFLYRSIIQGTIEAPYRAL 266 Query: 77 WNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI 136 S + F + + LR + R L Sbjct: 267 ARSEKSLKAVLDAVPDLMFEMTRSGRYLRVHTRVPGLTERVPEQIAGRTIDEVLPPDAAG 326 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL-LSLFTAVLIYNMLFYYLTRMIVSPHF 195 L + + F + +L ++ + F L+R + Sbjct: 327 VVRTALTQAEATGHTQGQQFALEMTDGRHWFELSVARIQDPGFADPRFVVLSRDVTQRMQ 386 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFT 252 R+ ++ + + GY Sbjct: 387 DLDALRKLRHAVEQTPHSI------IITNLRGQIEYVNPSFTTVTGYGSDEVMGRNPRML 440 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMV 309 + + + E ++ + + + Sbjct: 441 GAGKTSAEVVAQMWERLLSGLAWKGELLNRHKTGREVWEYVSISPMRDEQGAITHYISVQ 500 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLE 361 + R A D LT LPN Q + L +D + Sbjct: 501 EDISERKSNEERIRHLANFDALTGLPNRAMFSARFSQALGLSQRSEGSLALLYLDLDRFK 560 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + + L L+++ + + + G E L+VL T H L Sbjct: 561 NVNDSLGYAVGDGVLIDVAHRLKALLRDEDTVSRYGGDEFLVVLP-LTTAQGAVHFAERL 619 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 S+ + L + + + G+ ++ L ++ Sbjct: 620 HGELSKACQVESHALLVTFSVGIAMYPGDGSDMEALTHHAEVAMYKAKEMGRDH-YCFFS 678 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + Q+++ + + N +RTA+ QG++ L+ QP ++ G + +L + G++ P Sbjct: 679 ADMQAQSSRLLRIENGLRTAIAQGEMSLHFQPQWRVHDRRMVGVEALLRWTHPELGVVGP 738 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRII 594 +F+P+ L VL++ L L +VNL ++ + Sbjct: 739 AEFIPVAESSGQIIDIGLWVLDTALACLRRWRDAGHTDLTVAVNLSLAQFRHPDLVEVVQ 798 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + +R + + + LE+TE A E ++ + L G ++++DDFGTGY+++ L+R Sbjct: 799 KALQRAGVPAEVLELELTESIAMHEPEKAIACVRALADLGVQLSLDDFGTGYSSFSYLQR 858 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L+ +KID FV+++ T IVR+I +++++ L+ +AE VET Q L L Sbjct: 859 LRVHRLKIDQSFVRNLDT-ARGMSIVRAIVEMSRSLGLATIAEGVETPHQLEALAGLSCD 917 Query: 715 YLQGYLIGRPQPL 727 +QGY + RP P+ Sbjct: 918 MVQGYHLSRPLPV 930 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/334 (8%), Positives = 76/334 (22%), Gaps = 33/334 (9%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVV---PV 67 + + L F+ + + + +P ++ + +L + V+ +L + V + Sbjct: 75 LGVALLDFSHMLSYAGMPDYFTPNSVSKGIWFWLPARYVAVLTLLLAVVLPWTVPDTTEM 134 Query: 68 LCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFW 127 + + L + +++ G + + + Sbjct: 135 GLALRLRPVAFMLLLVGAIHAAVLYYPWILPETFVPATGLTGFKVGAE------YGLIVL 188 Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 LV + ++ L G + FT+ + +L + Sbjct: 189 HVLVFGLLLRQMRQPTTFNAPPLLAAVGTMGLGEFFFTLYVDAADHFNLLGHIYKLLGYL 248 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN----------- 236 + S EK + + + Y Sbjct: 249 FLYRSIIQG--TIEAPYRALARSEKSLKAVLDAVPDLMFEMTRSGRYLRVHTRVPGLTER 306 Query: 237 --DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + IAG + GV Q L+ + + Sbjct: 307 VPEQIAGRTIDEVLPPDAAGV------VRTALTQAEATGHTQGQQFALEMTDGRHWFELS 360 Query: 295 LAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQ 325 +A + + + R + Sbjct: 361 VARIQDPGFADPRFVVLSRDVTQRMQDLDALRKL 394 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 92/429 (21%), Positives = 178/429 (41%), Gaps = 16/429 (3%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHY 367 + +R A D LT LPN L EQ + + + +D+ + ++ Sbjct: 442 KEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSL 501 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 G + ++++ L ++ + + + G E ++VL+ + + Sbjct: 502 GHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFAL 561 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 H + L + F + + LL + + + ++ Sbjct: 562 PFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRN-NYQFFTDELNKS 620 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 ++ +L +R AL++ +LLLY QP+ + G + +L + ++TPDKF+ L Sbjct: 621 AYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINL 680 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L V+ ++ + R ++NL K++ I R+ Sbjct: 681 AEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSET 740 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + + LEITE N E + + +L G I+IDDFGTGY++ LK+ + Sbjct: 741 GVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTL 800 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+D+VT+ D IV +I +A + + V+AE +E ++Q L + QGY Sbjct: 801 KIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYY 860 Query: 721 IGRPQPLAD 729 +P +++ Sbjct: 861 FSKPVTVSE 869 >UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607V4_METCA Length = 819 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 111/596 (18%), Positives = 203/596 (34%), Gaps = 27/596 (4%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 G + F + +TR + A+ R E Sbjct: 223 IIGLKGGRRWLESHAVPFASRPGAPDAVLAVTRDVTERKLAEEAVRLAATAFETSEAIMI 282 Query: 216 TLSWLAAL-SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 T + T Y +D I G G + + + A+ Sbjct: 283 TDAAGIVQRVNSGYSAITGYTSDEIVGTPSEFLHP----GGEEGKTSPRAILEALKGTDC 338 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + + + + + + + + A DPL Sbjct: 339 WKGELTARRKNGDVCPVWLSIKAVRNDEQILTHYVVTFVDISERKRAQQEIEQLAYFDPL 398 Query: 332 TLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN R + Q + S + +D + ++ G + +R + L Sbjct: 399 TGLPNRRLFLERLNQAIGESCVNGSRCSLLFVDLDRFKHLNDARGHTVGDQLLRKVAERL 458 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETE--------GRLQHMVNILNSRQIHWNNTGLDM 435 + + +L G E +++L+G + E + + ++ R ++ + Sbjct: 459 SEGVGRGGMVARLGGDEFVILLNGLDEEFESACRRTMDVAENLRVILQRPFVLSSGQHYV 518 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + ++ LL ++ A + + + ++ L + Sbjct: 519 TASIGTAIYPFDTDSADDLLKAADMAMYEAKASGRN-TVRAYASTMQAAAETRLTLERDM 577 Query: 496 RTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL++ + LY Q + G + +L GI+ PDKF+ L + L Sbjct: 578 HAALERREFRLYLQSQVDGNGRIVGAEALLRWEHPTEGILLPDKFIALAEETGLILPIGE 637 Query: 554 QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 V E + SVN+ P Q + + R+ KR +P +I EITE Sbjct: 638 WVFEQVCHENVRLSQAGHRLSLSVNISPRRFQQADFLDHVQRILKRTGANPHDLIFEITE 697 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 S+ + ++ + L + G R ++DDFGTGY++ LKRL +KI FV D+ + Sbjct: 698 GLLVSDFDDAIAKMSFLERLGIRFSVDDFGTGYSSLAYLKRLPLSELKIAQTFVNDLPDD 757 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D +V++I +A +L VAE VET+ Q L G QGY P P + Sbjct: 758 PSDVALVQTILSMAYHLNLETVAEGVETRAQLEFLKARGCTRFQGYYFSPPLPATE 813 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 102/587 (17%), Positives = 206/587 (35%), Gaps = 31/587 (5%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 +F V+ + + + + ++ + Sbjct: 304 LFCVLLTSTALQSEDGEFRGSRCILVDYTERRRHEKELQQAAVVFDAIREAVIITDD--- 360 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 ++ I GY + + + + +L +++ Sbjct: 361 ---ARNIVAVNNAFTDITGYTLDDVYGRNPRLQQSGRHDKTFYRSLWRSITEHGHWQGEI 417 Query: 280 NFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + Y + V+ + + + + ++ A D LT LPN Sbjct: 418 ENKRRNGEIYPAWQNINVVYDKNGNVANYVSVFSDISVIKEKEKQLRHLANHDSLTGLPN 477 Query: 337 FRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 E+A + + + +D + ++ G ++++ R LL ++ Sbjct: 478 RLLFFNSLENSLERARRRRMEVALMFIDLDRFKIINDTMGHEAGDILLKTVARRLLEAVR 537 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 + + +L G E + L L + +H + F Sbjct: 538 GEDMVARLGGDEFTISLEELSNTEDAAAKAGKLIETIRQPVHIGGHEIVCSASIGIAIFP 597 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + Q L ++ H + ++ + + + L + +R AL++ + Sbjct: 598 HDADNAQNLARAADAAMYRAKELHRN-TFEFYTSELTERAIEHLTLSSEMRQALERNEFE 656 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP N G + +L G++TP F+ + L V+ L + Sbjct: 657 LYYQPQFNLTSGRLVGAETLLRWRHPTRGLITPYCFINIAEDSALIDPIGGWVINQLCRD 716 Query: 563 LATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV--ILEITEEQAFSN 619 +A R + N+ L ++ GRI +R+ + P + LE+TE + Sbjct: 717 VAGWLKGGLKLPRIAFNVSSKQLEHYDVKGRIEHALQRWGLEPSDLDLELEVTEGAL-QH 775 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 E S+ + Q+ G +AIDDFGTGY++ RLK + D +KID +F++D+ + + + Sbjct: 776 EERSVEVLRQVRLLGLSVAIDDFGTGYSSLSRLKHMPIDTLKIDRMFIRDLPDDPNNQAL 835 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 I L +A L VVAE VE +Q L + QG+L+ +P P Sbjct: 836 ASGIILLGRALGLKVVAEGVENVEQLRFLQERNCDEAQGFLLSKPLP 882 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/219 (9%), Positives = 55/219 (25%), Gaps = 14/219 (6%) Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY 185 LV + + V + D+ L + + +L + A ++ Sbjct: 14 LRRLLVFSLLGAGLLSTVFLWADYQLMETLPAAQKAELSLQSAMLYILIACVVLI--GGV 71 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL--SVLLLLLCTPYENDFIAGYL 243 + ++ + R ++ A +W+ L + + Sbjct: 72 VAWVLTANEARNKALRESRNNLDKAQQIARLGNWVWDLKRNEVYWSDQVYRNLGLSLHDN 131 Query: 244 VPVFFIIFTLGVGKLRYPFLNLT-WAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLI 299 + R + L A+ + + E + ++ + Sbjct: 132 KASYEKFLECVHPDDRARIVKLVDEALENKQVYGIEHRVIWPDGEERIVCGAGEVIFDVQ 191 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQAL--TDPLTLLPN 336 V + ++ + R + A D L N Sbjct: 192 GNPVQMHGTIQDITERKRDENRKNEYAHLIYD----LYN 226 >UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE8_9CYAN Length = 990 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 99/556 (17%), Positives = 197/556 (35%), Gaps = 30/556 (5%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 +R A ++R + + +++++ + L+ + Sbjct: 433 IQKDISERKRSEANLKKSQERLKKIVSAISDALIVINING----------LIKFVNLAAE 482 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRI 311 + + + L +Q + + L +R Sbjct: 483 VLFDRSESFLIGYPIGNFLLEEDKIELTIVQPKGKLVFVEIRSVEIDWEGEKATLVSLRD 542 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEF 362 + + A D LT LPN EQ + L +D+ +F Sbjct: 543 ITERKQAEEQLRHSAFYDALTNLPNRALFMDQLEQAITQTKTLNQTSFAVVFLDLDSFKF 602 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ G ++ + +I L ++ + L +L G E +L E + +V + Sbjct: 603 VNESLGHIIGDQLLIAIADRLETCLRSGDILARLGGDEFTFLLKDIEQVSQAITVVQNIQ 662 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + ++ L + + +L + Sbjct: 663 HKLTFPFDLSSHQLFSNASLGIALISPDYTYPEEVLRDADIAMYSAKQRGKN-CYAIFNS 721 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + ++ ++ L +R A +Q D L+Y QPI + G++ ++ G+++P Sbjct: 722 QMRKKSQHRLQLETDLRYAWEQQDFLVYYQPIVCLQTHQIVGFEALIRWQHLTKGLISPY 781 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRI 593 +F+P+ + L VL++ L + SVNL + N +I Sbjct: 782 QFIPVAEETGLIIELGSWVLKTACHQLKAWTRTNPRMQHLKMSVNLSSRQIQDYNFVKKI 841 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ I+PQ + LEITE N E + Q+ ++++DDFGTGY++ L Sbjct: 842 NQVMTETQINPQNLKLEITESILMENPEDVKEKLIQIRSQNIQLSLDDFGTGYSSLSYLH 901 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + +KID F+ + N + IV++I LA + V+AE +ET + L L Sbjct: 902 NFPINTLKIDRSFIVRMNLNPENTAIVQAIITLAHTLGMDVIAEGIETVEHLKHLQALEC 961 Query: 714 QYLQGYLIGRPQPLAD 729 +Y QGYL +P + Sbjct: 962 EYGQGYLFSKPVSAIE 977 Score = 74.2 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 14/215 (6%), Positives = 47/215 (21%), Gaps = 40/215 (18%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + M V H ++ + ++ + GY Sbjct: 308 ILAMAVERHRSEEYLHLLERAINSANNGIIITDPHQPDNPIIYF---NTAVEHSTGYPAS 364 Query: 246 VFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---I 299 F G + + + A+S N + + + ++ + Sbjct: 365 EIMGKNCRFLQGKDRNQPEINIIRAAISAKKECNVVLRNYRKDGSLFWNELFISPVFNNK 424 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---QEAGKSFCCLR 356 + + + + ++ + + + Sbjct: 425 GKLTNFIGIQKDISERKRSEANLKKS---------------QERLKKIVSAISDALIVIN 469 Query: 357 IDNL-EFMS----------RHY--GLMMRVHCIRS 378 I+ L +F++ + G + + Sbjct: 470 INGLIKFVNLAAEVLFDRSESFLIGYPIGNFLLEE 504 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 10/125 (8%), Positives = 31/125 (24%), Gaps = 9/125 (7%) Query: 208 LGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGKLRYP- 261 ++ +L L+ V + + I GY + Sbjct: 25 KSIDEIQNSLFMLSPDLVGITDFNGYFKEVNPAFESILGYTAGQLLAQPWIEYVHPDDQN 84 Query: 262 --FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 ++ ++N+ F + L++ + ++ + R + Sbjct: 85 ATLQAFEQLLNQEPIINFENRFRCQDNSYKYLSWTAIADLENNLVY-AVARDITMQKHTE 143 Query: 320 RRWHL 324 + Sbjct: 144 TQLRW 148 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 108/569 (18%), Positives = 203/569 (35%), Gaps = 31/569 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIA 240 + R I + H L E + + V++ ++ I Sbjct: 232 VLRSIGTVHDITKQKIAQNELMLASE-----VFSKMSDGVVITDANQSIIKINESFTKIT 286 Query: 241 GYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 GY + + + + + Y + Sbjct: 287 GYTNEELIGMTPKAFSSGWHDEAFYKKMWDDIKQNGQWSGEIIDRKKSSERYIAEMNIIA 346 Query: 298 LISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 L + + + + + + H A D LT LPN E+ Sbjct: 347 LHNDDGILTNYISITNDISKKKEQEKLIHNLAYFDSLTDLPNRVLFEERVVSRIPFSKRH 406 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + + +DN + ++ G M + + + ++E + L +L G E ++L Sbjct: 407 DKKMALLFIDMDNFKNVNDTLGHFMGDMFLIEVSNIIKNSIREQDTLARLGGDEFTVLLE 466 Query: 407 GPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + + + + L G + + ++ L Sbjct: 467 DINSIMDIVPIAEKIIAAFNNPVLIESKELYTGISMGISLYPDDGKSYNELFKAADTAMY 526 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYD 520 Q A ++ ++ + T+++ L N++R A+ +L L QP N G + Sbjct: 527 QVKASGKN-NFQFFKQSMNEKITERLFLENSLRNAIGNNELFLVYQPKINLETKRVYGME 585 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ + G++ PDKF+ + + L V + + S+N+ Sbjct: 586 ALIRWRHPEIGLIRPDKFISISEETGQIYNIGLWVAKQAIIDTKALHEAGHILTVSINVS 645 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 L + I + I V LEITE SN + ++ + +L GF+++ID Sbjct: 646 SKQLENEKFIDDICCVVNEIGIDKSYVELEITESHIMSNIDKALKILNELSDKGFKLSID 705 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK+L A IKID FV DI + D IV +I +AKA V+AE E Sbjct: 706 DFGTGYSSLSYLKKLPAQTIKIDRSFVLDIYKDEDDRSIVATIIAMAKALGKDVIAEGSE 765 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 TQ+ L L +QGY +P + + Sbjct: 766 TQEHIDTLKYLHCNKVQGYFFSKPIEIDE 794 Score = 42.3 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 13/154 (8%), Positives = 34/154 (22%), Gaps = 13/154 (8%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND---- 237 F ++ + + + E LA + L L T Sbjct: 99 YFNGEVSAVLGIFWDITEFNEEKEHFKKLEYGLSKAQELANIGHWELNLVTNDLFWSDEV 158 Query: 238 -FIAGYLVPVFFIIFTLGVGKLRYPFLNLT-----WAVSTLCLLNYNQNFLQGVETEYSL 291 I G F + + + + L +++ C + ++ + Sbjct: 159 YRIFGLKPQEFGATYEAFLEHIHPDDVELVNSSYSDSITNRCGYHVTHRIVRKNGEVGFV 218 Query: 292 AFILAVLISFSVCL---LYMVRIYHRSEWLNRRW 322 + + V + + Sbjct: 219 EERCEHEFDNDGNVLRSIGTVHDITKQKIAQNEL 252 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 119/741 (16%), Positives = 248/741 (33%), Gaps = 49/741 (6%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN 78 + + +I + + + W + + GWR V Sbjct: 34 AMMIAVIACAGALYAFQRHAHPTVLPIWFGAVLAVC-----GWRTAATVRRNARPPRRTA 88 Query: 79 FHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC 138 + ++ + L Q L + W G +T ++ Sbjct: 89 SAPAMRNLIAEATLTVVCLMSVPSWLLSQTTGTTYAILVCLLTG--ILWAGCLTLATVRA 146 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 + + + + I + + D ++ L A+ R + + + Sbjct: 147 AAMVYVATGAAIVVIGLLWANQDFEHLMLASLFPLGALT--------AMRSVDTQAKMFL 198 Query: 199 LWRRDIAPSLGKEKRAFTLS----WLAALSVLLLLLCTPY-----ENDFIAGYLVPVFFI 249 +R + L + + Y G Sbjct: 199 DNQRQQQSLTKQSDLIGLLLKDYEEQTSDWLWETDSSLRYTNPSDRFVEALGRPSDAIRG 258 Query: 250 IFTLGVGKLRYPF------LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + L + + + + Sbjct: 259 ATLGSLLQDEEATGNGAACLQVRACAEARQPFRDIVVPFTRAGEMRWWSISGRPVYDETG 318 Query: 304 ---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------KSFCC 354 + ++ R A D LT LPN + ++ Q + Sbjct: 319 TFLGYRGVCSDVTATKDAELRIAHLAHHDALTGLPNRAFMSESLHQALRDPDRACLAVLS 378 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ YG + S+ L + + + + G E +++ + + Sbjct: 379 LDLDGFKAVNDRYGHPGGDALLTSVAERLQNEVSGGDIVARFGGDEFVVLNVAFTSPSEV 438 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + L S + +N + +G + T + LL ++ Sbjct: 439 EDLARRLIESLSTPVPLDNESVTIGVSIGIAFAPTDGRTAEELLKNADAALYRAKTAGRG 498 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 E + + + L+ +R AL + +L L QP G + +L Sbjct: 499 -TFRFFEPEMDRKLQARQRLVQDLRNALTRDELRLDYQPFVKSETGVISGCEALLRWRHP 557 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 + G+++P +F+PL + L + V++ + A+ P R SVN+ P+ ++ Sbjct: 558 ERGMISPVEFIPLAEESGLIVPIGMWVIQQACREAASWPSTY---RISVNVSPVQFRSRD 614 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I+ ++P + +E+TE +A++++ + Q+ G R+A+DDFGTGY++ Sbjct: 615 LPQVILAALTSSGLAPARLEVEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSS 674 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+R D IKID FV+++ T +IV++I D+A+ ++V AE VET Q L Sbjct: 675 LSYLRRFPFDKIKIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRL 734 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + G + LQG+L RP+P + Sbjct: 735 RQTGCEELQGFLYSRPRPANE 755 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 103/577 (17%), Positives = 198/577 (34%), Gaps = 33/577 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFI 239 R + RR A E R + + + + + Sbjct: 349 GSRRSLRGLTLDVTAHRRAAAALKESENRYQDVVNHISEVIFRTDAEGRWTLLNPAWEAL 408 Query: 240 AGYLVPV--FFIIFTLGVGKLRYPFLNLTWAVSTLCLL--NYNQNFLQGVETEYSLAFIL 295 G+ V + + R + + + + ++ Sbjct: 409 TGFKVEETLGQPMCAFVDPEDRDDAQSFCSTLLEGGTHAQSEEIRLRTHDGSHRWVSIYA 468 Query: 296 AVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + ++ + A D LT LPN L Sbjct: 469 SARFDEDGHIMATFGTMMDISDRKEAEEEIRRLAFFDGLTGLPNRTLLHDRLGQALANTA 528 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +DN + ++ G + + + R + ++E + L +L G E +++ Sbjct: 529 RTRHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENSVREADTLARLGGDEFVII 588 Query: 405 LSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 L+ + + L + F G ++ +L Sbjct: 589 LNDLHPDPARAATEAEAVGRKLINLLREPFQLAGQNRHVTPSIGATLFSGRSLGVEEVLK 648 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--K 514 Q ++ + + + + L N +R ALD+ + QP + Sbjct: 649 QADLAMYRAKNAGRN-TVRFYDPELHRAVEARFELENELRHALDEDRFSVVYQPQVDAEG 707 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKG 572 G + +L G ++P +F+P+ Q L +VL + L + Sbjct: 708 RVIGAELLLRWEHAQRGAISPAEFIPVAEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRD 767 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 SVN+ + + + + + LE+TE ++ + +I++L Sbjct: 768 LTLSVNISARQFRDPHFVPHLREILQETGAPGDRLKLELTESMLLEEIDTVVAHIDELRA 827 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G A+DDFGTGY++ LK+L +KID FV+D++ + DA I + + +LA+ L Sbjct: 828 LGVEFALDDFGTGYSSLAYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLDL 887 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET +Q+A L LG ++ QG+L G P LAD Sbjct: 888 DVIAEGVETVEQRAFLFGLGCRHFQGFLYGYPGDLAD 924 Score = 42.6 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 13/196 (6%), Positives = 29/196 (14%), Gaps = 10/196 (5%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 ++ + G +D + + L M Q Sbjct: 177 ILAAILFALMTTRRLRLLLQGGRALEAGQLDHRVKIDSRDEFGDLARTFNDMAAHLDTTQ 236 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFFIIF 251 + R ++ A + + + G+ Sbjct: 237 STLLQQNQQLNRSVARLESMLGGANAILWESNPESHEWEFVAGDTRKLLGFPSRNLGRGE 296 Query: 252 TLGVGKLRYPFLNLTWAVSTLC--LLNYNQNFLQGVETEYSLA--FILAVLISFSVCLLY 307 + A + F L A L Sbjct: 297 LRARHIHPDDLPRVREAAHAAGNEPQVVDYRFAHRNGQWIWLRDILSSAEDPGSRRSLRG 356 Query: 308 MVRIYHRSEWLNRRWH 323 + Sbjct: 357 LTLDVTAHRRAAAALK 372 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 111/620 (17%), Positives = 210/620 (33%), Gaps = 32/620 (5%) Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 G + L D V S+ A + I Sbjct: 63 AQGSVLERHQRFLDEGGKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLVYVLDISE 122 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---I 249 + A + + A + ++ + GY Sbjct: 123 RKKTHEQQQIAAAVYDASHE---AIFVTDADNNIIS---VNPAFSRLTGYHFDDVNGKNP 176 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---L 306 + + A+ L +Y + V+ + + + Sbjct: 177 RMFKSSRHPPSFYAEMWHALHEKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHV 236 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRID 358 M + QA D +T LPN + EQ A + + +D Sbjct: 237 GMFSDITLRKKQEELIWRQANYDAITDLPNRHLFQSKLEQAAQHARRTGNLMALMLIDLD 296 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL-YQLPGSELLLVLSGPETEGRLQHM 417 + + ++ G + + + L+ +Q + + +L G E +++S + Sbjct: 297 HFKAVNDSMGHRAGDMLLTRVSQRLIDSVQHADTIIARLGGDEFAVIISDLFQPHDCDAL 356 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 L S + + + + F + + L+ L + Sbjct: 357 AKALLENLSHPFNIDGENMFVSASIGIACFPTDSDNLEALFKNADQAMYAAKNAGRN-GF 415 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 + ++ + N +R A+ + +Y QPI + ++ G Sbjct: 416 SYYSPALHDAARTRLRMTNDLRKAIREEQFEVYYQPIVALDTGHITKAEALVRWHHPTHG 475 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIA 590 +++P +F+PL + + V + LA + ++NL P+ L ++ A Sbjct: 476 LVSPAEFIPLAEETGIIIPLGNWVARQAIAQLARWRQFCDPRFQMTINLSPIQLRSQDFA 535 Query: 591 GR-IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +R R+ +S A+ +EITE + N+ G +IAIDDFGTGY++ Sbjct: 536 DMDWLRELDRHGLSGDAIAIEITEGLLLNAEPRVNRNLHMFRDAGIQIAIDDFGTGYSSL 595 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+R D +KID F++D+ + + + +I +A + L VVAE VET QQ A+L Sbjct: 596 AYLRRFNIDYLKIDRSFIEDM--DGVGHELCVAIVAMAHSLGLQVVAEGVETLQQSAMLK 653 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 ++G Y QG+L RPQ AD Sbjct: 654 RIGCDYAQGFLFSRPQSAAD 673 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 115/804 (14%), Positives = 248/804 (30%), Gaps = 96/804 (11%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 + L+ + + + + ++ + + + W + G+ Sbjct: 191 RWLELSLFAVLAFL-------TSLVAFHGWTSSSFEDIPLGYLMYLFVTWAAIRLGRHGV 243 Query: 72 FCTNLWNFHLSFLQTAVMLGSQ--------------TFVVLCACAILRWQLGTRWRYGLT 117 L L +G + +L + R G Sbjct: 244 TLVLLLTAVQGVLGALDGVGFFAGDIHSGLANFWLYMISLSLVGVVLESTIRQHRRDGDA 303 Query: 118 SRYVWQRLFWLGLVTPIGIKC----------------SMYLVGSFFDFPLKISTFFGDAD 161 R RL + P+GI + + S F + G+ Sbjct: 304 LRESESRLHAILDHAPVGIWLVGKDGRYQFVNKRFCDATGIPESAFLATTHLPDLMGEQI 363 Query: 162 AIFTV---------------VDLLSLFTAVLIYNMLFYYLTRM-------IVSPHFAQIL 199 A + V+ L L L + R + Sbjct: 364 AAACLASDQACLSQDEPYVSVETLPLVDGKLHQLEVTKAQLRDSNGEVIGAIGISVDVTG 423 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-------------YENDFIAGYLVPV 246 + E R V + + +D I + Sbjct: 424 RNQAEEALRESEARWSFALEGGGDCVWDWNVSNNEVSLSKGGKGMFGFADDEIGNDMSEW 483 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL----AVLISFS 302 + + +L + + + ++ + Sbjct: 484 NARVHPEDISRLLSRISDFFHS--KADRFSAEYRVRCKDDSWKWILTRGMVAHRSTDGRV 541 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 ++ + QA D LT LPN R EQ ++ + Sbjct: 542 TRMIGTHTDLSERKLAEETIRRQANYDSLTQLPNRRLFRDRLEQTIRLAKRDQSSFALML 601 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D+ + ++ G + + + ++E++ + ++ G E +++L + Sbjct: 602 IDLDHFKEVNDTMGHDAGDFLLVDAAQRIQHCVRESDTVARMGGDEFVVILPDVNDPDNI 661 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + + + + ++++ LL + Sbjct: 662 ERIAQNIITKLAAPFVLGEEKAFISASIGITLYPSDADSMETLLKNADQAMYVAKHLGRN 721 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 + ++ K++ L+N +R AL L ++ QPI + + ++ L Sbjct: 722 R-MSYFTPVLQENAQKRMRLVNDLRDALSSNQLRVFYQPIVELATGDIHKAEALIRWLHP 780 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 G+++P +F+PL + + VL + + G + SVN P+ Sbjct: 781 TRGMVSPSEFIPLAEETGMIIEIGDWVLRQAMHQVKRLQASHHKGFQISVNKSPVQFHND 840 Query: 588 NIA--GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 N + ++ + ++++EITE + + + G ++AIDDFGTG Sbjct: 841 NPLKAAEWLGELEQNGLLASSLVVEITEGVLLDDDGNVKDRLLASRDAGIQVAIDDFGTG 900 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK+ D +KID FV ++ + D + +I +A L V+AE VET+QQ+ Sbjct: 901 YSSLAYLKKFDIDYLKIDQTFVNNLGNQSDDMALCEAIIVMAHKLGLKVIAEGVETEQQR 960 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 LL + G Y QG+L + P + Sbjct: 961 DLLKQAGCDYAQGFLFSKAIPAEE 984 Score = 70.4 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 41/380 (10%), Positives = 82/380 (21%), Gaps = 59/380 (15%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG-- 60 + + K + F + + PL+ +S L + +LS++ F Sbjct: 53 LAALIAGGRKYWPGIFIGALAAYLVIWRSVPLSFFIASSNVLEALTAVWLLSLIKTFDSG 112 Query: 61 --------WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA-ILRWQLGTR 111 W + M + L F + +L LGT Sbjct: 113 FKQPRDYLWLIFAGSIAAMLAATIGVVTLVFANVLPIADIFHAWGYWVMGNLLGIALGTP 172 Query: 112 WRYGLTSRYVWQRL----FWLGLVTPIGIKCSMYLV------------------GSFFDF 149 + + WL L + LV F Sbjct: 173 FLLIWRKQPSRWINKEQSRWLELSLFAVLAFLTSLVAFHGWTSSSFEDIPLGYLMYLFVT 232 Query: 150 PLKISTFFGDADAIFTVVDLLSLF--------------TAVLIYNMLFYYLTRMIVSPHF 195 I + + + + + + + + L+ + V Sbjct: 233 WAAIRLGRHGVTLVLLLTAVQGVLGALDGVGFFAGDIHSGLANFWLYMISLSLVGVVLES 292 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVF--- 247 RRD E R + A + + L+ Y G F Sbjct: 293 TIRQHRRDGDALRESESRLHAILDHAPVGIWLVGKDGRYQFVNKRFCDATGIPESAFLAT 352 Query: 248 -FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSV 303 + +G + +S + + L A L + Sbjct: 353 THLPDLMGEQIAAACLASDQACLSQDEPYVSVETLPLVDGKLHQLEVTKAQLRDSNGEVI 412 Query: 304 CLLYMVRIYHRSEWLNRRWH 323 + + Sbjct: 413 GAIGISVDVTGRNQAEEALR 432 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 24/284 (8%), Positives = 66/284 (23%), Gaps = 11/284 (3%) Query: 40 SYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLC 99 + I W+P V L+ L G + + G L + L + + + Sbjct: 40 AKISPVWLPSGVGLAALIAGGRKYWPGIFIGALAAYLVIWRSVPLSFFIASSNVLEALTA 99 Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 + + + + I + + + Sbjct: 100 VWLLSLIKTFDSGFKQPRDYLWLIFAGSIAAMLAATIGVVTLVFANVLPIADIFHAWGYW 159 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 + L + F + + + + + + Sbjct: 160 VMGNLLGIALGTPFLLIWRKQPSRWINKEQSRWLELSLFAVLAFLTSLVAFHGWTSSSFE 219 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 L L+ L + + + V + ++ + + A+ + + Sbjct: 220 DIPLGYLMY-LFVTWAAIRLGRHGVTLVLLLTAVQG---------VLGALDGVGFFAGDI 269 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + Y ++ L ++ S + R R H Sbjct: 270 HSGLANFWLYMISLSLVGVVLEST-IRQHRRDGDALRESESRLH 312 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 102/566 (18%), Positives = 210/566 (37%), Gaps = 27/566 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + + I + E R L ++L+ + A ++ Sbjct: 131 LAARVHTHIALKVAYRHLKDSELRYRKLVETTPDAILVEGEEGIVFLNSAAVKMLKADNP 190 Query: 250 IFTLGVGKLRYPFLNLTW----------AVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 LG L + + +V Q + + Sbjct: 191 DKLLGGALLDFVLDDQKEYAAMQLKQACSVDRSAGPPEVMLLQQLTGGRVEVEVNCIPIS 250 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 S C ++++R QA D LT LPN E+ Sbjct: 251 YHRSPCHMFVLRDITERRRQEAAIEFQATHDALTGLPNRSLFLDRVTQSINHARRNESRL 310 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G +R + + L + + L + G E +L++ E+ Sbjct: 311 ALIFIDLDKFKLINDTLGHNAGDDLLRIMSKRLQECTRNCDTLARFGGDEFVLLVDNLES 370 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E L H+ L S + + F + + ++ L+ ++ Sbjct: 371 EADLTHLAARLISSVSAPVLLLGQSHSITCSLGISSFPEDGDNVEVLMRHADIAMYRAKE 430 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + + +++ L ++++ AL+ + +L+ QP + + G + ++ Sbjct: 431 SGRN-SYQFFTHQMQDRLNERLKLESSLKQALENDEFVLHYQPQVDLSTGKIIGLEALIR 489 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 G++ P F+P + L + V+ ++ K L + ++N+ L Sbjct: 490 WQSPTLGLVPPGDFIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVPVAINISALQ 549 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +++ + + Y + P+ + LE+TE + + +S+ +++L G ++IDDFG Sbjct: 550 FMEQKTEELVKQALNEYMVEPKYLELELTESLSMLDPVTSISLMQRLKDIGVSLSIDDFG 609 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY+N LKR + +KID FV + N D IV++I ++++ L +AE ET Sbjct: 610 TGYSNLSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAG 669 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q ALL +QG+ RP P A+ Sbjct: 670 QIALLAAENCDAIQGFYFSRPLPEAE 695 >UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1U8_SHEAM Length = 1069 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 100/567 (17%), Positives = 213/567 (37%), Gaps = 28/567 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLV 244 I + A ++ RA + +A +++ I GY + Sbjct: 483 IAAMAEAMNKMLKERKKYRQALVRAAAVFEYSAEGIMVTDADNHIELINPAFSQITGYSI 542 Query: 245 PVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + + + ++ + + Y + ++ Sbjct: 543 EEVKGRNPSILSSHRNPPHLYDAMWESLRSTGKWEGEIWNRRKDGEVYPEYLAITLVRDD 602 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 + + R + + +A D LT LPN + L + Sbjct: 603 EGQIVHHIGLFMDISRRKQYEQDIWYKANFDTLTDLPNRKLLSERLGHELKMAEHDGRKL 662 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D ++++ G ++++ + L +M + + +L G E ++VL Sbjct: 663 AVMVLDLDRFKYINDTQGHDCGDLLLKAVAKRLQTVMGSTDFIARLGGDEFVIVLPRLAQ 722 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E ++ L + + G + + ++ LL + Sbjct: 723 EHAVEQYAKRLLQSMGDPFKVEQGSMSVSASLGIGLYPQDGLDVETLLSNAETAMYGAKD 782 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + ++ +++ + +R A+ + L+ QP+ + E + +L Sbjct: 783 EGRNH-FKYFTQEMNLALIERLGMERDLRRAVANDEFCLFYQPVVDMESGEVTSLEALLR 841 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G+++P +F+P+ L V++ L LA G ++N+ Sbjct: 842 WQDPEQGLVSPVRFIPVAEDMGLMGELGQWVMDKALADLARLHTLGFGLSMAINVSACQC 901 Query: 585 L--QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 ++++ ++ R+ I+P+ + +EITE N+ + + + G I +DDF Sbjct: 902 HCKRQSLDEQLRSALSRHGIAPRHLHVEITESLLLDNSHHCLDTLNNIRDLGCAIYLDDF 961 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+ IKID FV+ + DA +VR+I +++K+ + +VAE +E++ Sbjct: 962 GTGYSSLSYLKKFPISAIKIDKSFVEQLPGCESDASLVRAIVNMSKSLGMKLVAEGIESK 1021 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 QQA L LG Q+ QGYL RP P + Sbjct: 1022 DQQAFLQALGSQFGQGYLYSRPLPFEE 1048 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 114/704 (16%), Positives = 217/704 (30%), Gaps = 44/704 (6%) Query: 53 LSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRW 112 + + + ++ ++R Sbjct: 136 VGAAMRTAPLVLAADTRLSQAARRMRESERDAAVIRFADTDDLGIVTERDLVRCIARYPG 195 Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + L I + + L + G + DLL+ Sbjct: 196 DTPIGHLASRPLLTVAANDMLIRARDML---MDHQVRHLAVLDDRGQVVGLLGFQDLLAG 252 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-- 230 + A + +A S + A + + +++ Sbjct: 253 AEQSY------------LKDLRRALEQRDKALAQSRKHLQLAERVIDSSLEGIVITDAHA 300 Query: 231 ---CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 + GY + + + A+ + Sbjct: 301 RIEFVNPAFTHLTGYSLEEVAGRTPAVLSSGRHPPSFYREMWQALQEQGYWRGEIWNRRK 360 Query: 285 VETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 Y + + + + R+ A DPLT LPN R L+ Sbjct: 361 SGALYLELLTITAITNDDGDTTHYAGLFTDITHIRENERQIRQLAYYDPLTRLPNRRLLD 420 Query: 342 QAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + + +D+ + ++ G + + + L ++E++ L Sbjct: 421 DRLSLAIKHAHRHRQRLAVMFIDLDHFKQVNDTLGHAVGDELLLRVSERLREHLREDDTL 480 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E L +L + + L S+ + +G + + E+ Sbjct: 481 ARLGGDEFLALLPDLQEVDEAIRVTQRLIEAISQPYTIGDHDFRVGCSIGLSLYPDDGES 540 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD-LLLYAQ 509 L+ +S + + Q+ L +R + G+ L ++ Q Sbjct: 541 PDALIRNADGAMYRSKTEGRN-TYRLYAPEMDTRAKNQLALETALRDTAETGEGLSIHYQ 599 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 PI + + +L G + P +F+PL + L V+ + L Sbjct: 600 PIFDWRTGALHSAEALLRWHHPTRGAVAPGEFIPLAERSGLIIPLGQAVMRMVCTQLKRW 659 Query: 567 PCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 ++NL Q + G I ++ +R ++P + E+TE + E + Sbjct: 660 QAAGLRPVPVAINLSAKQFWQDELPGFIRKMLQRCDLNPGLMGFELTESTLMHDIERGLD 719 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL-DAMIVRSIT 684 + L G +AIDDFGTGY++ L+RL +KID FV D+ T IV ++T Sbjct: 720 TLAALRGMGCSVAIDDFGTGYSSLTYLQRLPVTTLKIDRSFVSDLGTCRKGGCAIVAAVT 779 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA+ L VVAE VET+ Q L + V +QG+ GRP P Sbjct: 780 GLARELELQVVAEGVETEAQLRALDRYQVALVQGFKTGRPVPAD 823 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 103/585 (17%), Positives = 199/585 (34%), Gaps = 29/585 (4%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 L F R I + + + Sbjct: 72 WAELRSAPITWDKQPAFVICVRDITERKTSDLGLHLADTVFDSTREGLMVTDS------A 125 Query: 227 LLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 ++ I GY + + +++ + Sbjct: 126 QRIVRINPAFSEITGYSAADVLDQTPALLRSGRHDSAFYAAMWDSINVSGHWQGEVWNRR 185 Query: 284 GVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y + V+ + + ++ + A DPLT LPN L Sbjct: 186 KNSEIYPQLISIDVIRDHTGRVCNYVAVLTDLSKLRSSQLELDFLAHHDPLTRLPNRLLL 245 Query: 341 EQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + L +D + ++ +G ++ ++ + L+ ++ + Sbjct: 246 LSRLQHGIELAQRDGTHLALLMLDLDRFKDINDSFGHLVGDELLQLVATRLVKQVRTIDT 305 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQIHWN-NTGLDMGYGAAWGRFDGNQ 448 + + G E +++ + + N + S + + +G + N Sbjct: 306 VGRFGGDEFSVLMEDVAGAEQAARVANDIIRVLSEPYGLSSGVEVRIGASVGISIYPDNG 365 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T + +L Q Q+ E ++ ++ + +R A+ QG+L +Y Sbjct: 366 LTPELMLQQADSALYQAKIEGRGR-FAYFSESLTQAARARIDIEVRLRRAITQGELRVYY 424 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ G++ P +F+ + L D VL + Sbjct: 425 QPQVDIPSGRIVGAEALVRWQCPIEGLVPPARFITIAEATGLIGEIDDWVLRETCQQGQR 484 Query: 566 HPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL LQ +I+ + ++ + + LE+TE ++ Sbjct: 485 WRAAGLPTLTLAVNLSAYQFLQGDISQTVAQVLRDTGYPAAFLELELTESALMQREAQAI 544 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +++L G R+AIDDFGTGY++ LK D++KID F+ DI + D IV +I Sbjct: 545 QMLDRLKALGVRLAIDDFGTGYSSLAYLKLFPLDVLKIDKRFIDDIPAHRDDMEIVTAII 604 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + L V+AE VE ++Q A L G QGYL RP P A+ Sbjct: 605 AMAHSLRLKVLAEGVENKEQLAYLQTQGCDQFQGYLTSRPVPAAE 649 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 101/617 (16%), Positives = 206/617 (33%), Gaps = 42/617 (6%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 V FD ++ ++ ++ I + +Y+ R + + R Sbjct: 113 VHDIFDAGTAVARIEASRSLTPLLLRTFAVALCSAIIAAVVFYMLRTLPLRATS-----R 167 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLC--------------TPYENDFIAGYLVPVFF 248 E + L + L + + G Sbjct: 168 AYQALDESESKYRLLYESMREGMALHHMDFDENGDFAAISVIDANPSCAAMFGCDPQTLI 227 Query: 249 IIF--TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 L R L + + + + + + + Sbjct: 228 GSDSIALFGETFREYLSELLRLLEQGTSIQFELTLPRTDN-----LYSVHAFSPDHGLVA 282 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRID 358 + ++ A D LT LPN Q + L +D Sbjct: 283 TLFEDITERRKSEQQIQHMAYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFLDLD 342 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + + R L ++ + L +L G E +++++ + + Sbjct: 343 RFKDINDTLGHSAGDQLLIQVTRRLGRQIRSCDTLARLGGDEFVVIVTDLGKKMNATRVA 402 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L + L + F + + L+ S + Sbjct: 403 QDLINAIQPPFLIAGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNR-YN 461 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 ++ + ++ +R AL++ + + QPI N + ++ G Sbjct: 462 FYSASMNQKALMRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRWNHPTRGR 521 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAG 591 + PD+F+ L + L VL ++ + T RFSVN+ + +++ A Sbjct: 522 IPPDQFIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQIERQDFAE 581 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + + + + +E+TE ++++++ ++ L ++G AIDDFGTGY++ Sbjct: 582 IVRNALRESGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFGTGYSSLGY 641 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 +K L D IKID FV+DI T+ D IV +I +++ + +AE VET +Q L + Sbjct: 642 IKTLPIDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRFLQER 701 Query: 712 GVQYLQGYLIGRPQPLA 728 G + +QGY RP Sbjct: 702 GCEEIQGYYFHRPLSAE 718 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 98/546 (17%), Positives = 189/546 (34%), Gaps = 27/546 (4%) Query: 208 LGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFF---IIFTLGVGKLR 259 + A + + L I GY Sbjct: 186 EASLGLYGKVFESTAEGIAITDSRMRFLQVNEAYCRITGYSDGELLGRTPRMLKSGHHDA 245 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSE 316 + +++ + L ++V+ + +V + Sbjct: 246 AFYADISKTLEVRGHWRGEILDRTRDGRVIPLLQTISVVRDTQGAVSHYITIVTDISSIK 305 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYG 368 R A DPLT LPN E + +D + ++ G Sbjct: 306 ETQSRLDFLAHHDPLTELPNRLLFTARLEHAIDWAVRNQAHFGLLFIDLDRFKTINDSLG 365 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + + + R L L+++++ + +L G E ++++ G G + + L + Sbjct: 366 HQLGDRLLVQVARRLRGLVRKSDTIARLGGDEFVVLVEGIHNAGEAELLAEKLVHAMRQP 425 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 T L +G + + E LL + + ++ Sbjct: 426 FFLEETELHIGCSIGITLYPEDGEDPVTLLKNADAAMYRVKDFGRD-GFCKFSQDLAEAV 484 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ L +R AL + L ++ QP+ + + + + G + P F+ L Sbjct: 485 DERLALETALRQALRENQLQVHYQPVIDLAQGRMVAVEALARWRHAERGEIAPCSFIRLA 544 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L + + + S+N + L + + Sbjct: 545 EETKLILPLGGWMARTAIGQFRLWRERGMELDYVSINTSGIELFDPGFVDGLFEALDEHG 604 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + + +E+TE + E+ + +L + G RIAIDDFGTGY++ LK+L D++K Sbjct: 605 LEGRHLQIELTENVLMQDYEACRRVLLRLRQQGVRIAIDDFGTGYSSLAYLKQLPIDMLK 664 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+KD+ + D IV +I +A L+ VAE VET++Q+ L +G + LQGY Sbjct: 665 IDRSFIKDVPGDPGDCAIVETIIAMAHRLGLATVAEGVETEEQEDYLLAIGCERLQGYRY 724 Query: 722 GRPQPL 727 RP Sbjct: 725 ARPLDP 730 >UniRef50_A6CIW9 Sensory box protein/GGDEF domain protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CIW9_9BACI Length = 706 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 93/581 (16%), Positives = 201/581 (34%), Gaps = 26/581 (4%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL----- 226 L + M R++ ++ +L + ++ Sbjct: 119 LIYTEIQSYMEIICDKRVLFGSVIDITEQIEAQQMLEESNEKYKSLFESSPDAMYSMDEN 178 Query: 227 LLLLCTPYENDFIAGYLVPVF--FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 +L+ + + GY L + + + + ++ Sbjct: 179 GILIDVNPAGEQLIGYSTKEMKGMPFMPLVASEDLPEAIKHFESAKVGEPSSAELVLIRK 238 Query: 285 VETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + + V R + + + + A DPLT LPN + E Sbjct: 239 DSQKIHVEATHYPMKVNGEIVGTYGTARDITKKKLYDEKMRELAFYDPLTRLPNRKLFED 298 Query: 343 APEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 Q + L +D +F++ G + ++ + L ++ + L Sbjct: 299 RLGQIIKLAKIEEKLFSVIFLDLDRFKFINDSMGHHIGDEFLKLVADRLKQSIRSTDTLS 358 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E ++L TE + + + + + L + G + Sbjct: 359 RLAGDEFTILLPDI-TEEDVISIAERINQSLAEPFQVSGHWLSVSASIGIAFSTGKNVGV 417 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 ++ + Q+ + + T+ +++ + A+ +L LY QPI Sbjct: 418 SEIIHRADTAMYQTKKF-RRSQYTIYSDEMEVDTSYNLIIERDLPLAVINNELELYYQPI 476 Query: 512 RNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 N + + ++ + G++ P+ F+ + + VLE+ Sbjct: 477 MNLESEKVIAMEALIRWHHPELGMVAPNDFIRVAEECGQIIPIGNWVLETACIQNKKWQD 536 Query: 569 DK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + +VN+ L Q + + ++ + + + + LE+TE + E ++ Sbjct: 537 SGKPPFKVAVNVSTKQLQQYDFVDSVKKVLAKSGLEAKWLELEVTESILLDDVEEIKESL 596 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G I+IDDFGTGY + L++ D +KID F+ DI + I +I LA Sbjct: 597 TRLRGIGVSISIDDFGTGYTSLSYLRQYPFDTVKIDKSFIDDISRDLHGKRITSAIISLA 656 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +++VVAE +E + + L + QGY +P P+ Sbjct: 657 HSLNMNVVAEGIEGETELIFLKREKCDAGQGYYFSKPIPVH 697 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 109/570 (19%), Positives = 203/570 (35%), Gaps = 30/570 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 L + A E+ + ++++ ++GY Sbjct: 4 LVAATARQPATEGEVLSRAALLRAYEQSQDAILVTDRDNLIVA---ANGAFCQLSGYASD 60 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + ++ A++T Y+ +AVL Sbjct: 61 ELLGKDPRVLASDNSTAEHYASIWNALATKDFWEGEIWDKNKNGERYNRWLKIAVLRDAE 120 Query: 303 VCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + S+ R A DPLT LPN A E + Sbjct: 121 GQIENHVANFSEMEASKEYADRLAYLAYHDPLTNLPNRLAFESQLAQALRGCERDNRQLA 180 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G + ++ + L ++ ++ + ++ G E ++VL E+ Sbjct: 181 LMLIDLDNFKNINDTLGHHVGDELLQKVALRLRESVRSSDLVARIGGDEFVIVLPEIESP 240 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + N + + + L F + LL + Sbjct: 241 LTAARVANKVQQNMADSYRIADHALYATPSIGISLFPIDGSDANTLLRNADTAMYHAKDA 300 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALD-----QGDLLLYAQPIR---NKEGEGYD 520 ++ +++ + N +R A+ + L+ QP + G + Sbjct: 301 GRN-NHQFYTARMNEAAGERLHMENELRQAISAISPGDSEFSLHFQPQVQTATGQVFGLE 359 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNL 579 +L G ++P +F+ + + L V+ + + R ++N+ Sbjct: 360 ALLRWNNPIFGQVSPMRFIAIAEETGLIQPLGDWVIWETCRLIRQMKQHGIEDIRIAINI 419 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L +N+ + Y + P+ + LEITE A N E+++ ++QL G +AI Sbjct: 420 SAQQLRHENLLLLVRGALSCYDLRPEDIELEITESTAMQNPETTLSILDQLAAMGIVLAI 479 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK L +K+D FVKDI + DA I + L + L +VAE V Sbjct: 480 DDFGTGYSSLAYLKHLPIQRLKLDRSFVKDIEIDANDAAICTATIALGHSLGLELVAEGV 539 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET+ Q+A L LG LQGYL +P P + Sbjct: 540 ETEAQRAFLASLGCDTLQGYLYSKPMPFEE 569 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 113/595 (18%), Positives = 205/595 (34%), Gaps = 37/595 (6%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL- 228 L L +M+ S S E+ + +++ Sbjct: 329 LGLLRVANKAADYSEADGKMLASLAEYLAPLLAARLESRRAEELVARVLETIDEGFIIID 388 Query: 229 ----LLCTPYENDFIAGYLVPVFFIIF--TLGVGKLRYPFLNLTWAVSTLCLLNYN---- 278 ++ AGY + + + +LN Sbjct: 389 HEFKIVSANRAYAESAGYPLAEVIGRHCYQVSHQIDQPCYLNGEDCAVQHVFNTGEPHTA 448 Query: 279 -QNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + L + +V + + H A DPLT Sbjct: 449 VHTHYTAAGEPLYVETKAYPLERDDLGTVRRAIEVVTDITDKKNREQEIHRLAFYDPLTR 508 Query: 334 LPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN R EQ + L +DN + ++ G + + L Sbjct: 509 LPNRRLFFDRLEQAFSASARSGQHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERLQE 568 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQ-----HMVNIL---NSRQIHWNNTGLDMGY 437 ++ N+ + + G E +++L+ E + + + + +G Sbjct: 569 AVRANDTISRQGGDEFMVLLNNLSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHIGV 628 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F G+ L + Q+ + + + + + L+ +R Sbjct: 629 SIGLSLFLGHDTPADELFKRADAAMYQAKHAGRNQ-VRFFDPEMQAELEQASALVVDLRQ 687 Query: 498 ALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 A+ QG L+ QP + G + +L + G ++P +F+PL + NL V Sbjct: 688 AIWQGQFQLHYQPQTANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRWV 747 Query: 556 LESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 LE LA + +VN+ Q I R+ P+ + LE+TE Sbjct: 748 LEEACGQLAAWADLPAAGNCKLAVNVSARQFRQPEFVAEIRRILAATGADPKLLKLELTE 807 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + ++ +++L G ++DDFGTGY++ +LKRL + +KID FV+D+ ++ Sbjct: 808 SIVMTELADTVSKMQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSD 867 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D IV +I + + + V+AE VET++Q A L + G QGYL RP P A Sbjct: 868 PHDDAIVETIIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAA 922 >UniRef50_B3E9P2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9P2_GEOLS Length = 805 Score = 678 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 117/738 (15%), Positives = 245/738 (33%), Gaps = 30/738 (4%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMF 72 + + + L + I + L + + +F +V + C Sbjct: 52 RWAM--LAALFCYVLLAELFLAPDIDLPIFHIEQWSLSLKATAIFFAVAFPLVSLPC--- 106 Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ----RLFWL 128 ++W + V+L + ++ + R W Sbjct: 107 --SVWRNCRLVIYLQVLLDLLFVTAAIHWSGGVVSWLWPAYLLISLESAFLFEKKREVWG 164 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 + + + F + L+ L+ A + + F+ Sbjct: 165 IGMIGAALYGVLLAAEQLDFIATVRMPFMEEESPSILFELLMWLWVAGVNTVVSFFGAFL 224 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 M Q + + A + + LL L + Sbjct: 225 MDKIRSDHQKVQQSQEALTGFIATAHDLIFCCRQDGTLLYLNQVGQDMIGPLEGEGGDIS 284 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVLISFS--VCL 305 + + ++ L V L L+ + + Sbjct: 285 LFNLTDEEGKGLLARQFEKVTRRIDAGHFEMRLLSPAVGRILDLEVSLSTCCNDVPDQVI 344 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRI 357 + R A D LT LPN L +Q + L + Sbjct: 345 WGVCHDITERNLAQRELIKLAHHDVLTGLPNRILLHDRLQQARAFAHRMNSRFALLFLDM 404 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + +R I + L +E + + ++ G E ++++ + + Sbjct: 405 DRFKIINDTLGHAVGDDLLRMIAQRLKACFRETDTVARIGGDEFVVLMLNVTDRTDICTL 464 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + L ++ L + + +++ ++ ++ + + A + Sbjct: 465 NDKLLQELAQPFMIRGHELFVTTSGGVCTYPDDEDDVEIMMQKADIAMYHAKALGRN-NI 523 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + + ++++ + N++R LD+G+ LY QP + + ++ + G Sbjct: 524 QFYNDGMDQNSSRRFTIANSMRRGLDRGEFRLYYQPKLDVSSDCIVATEALVRWQHPELG 583 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 ++ P +F+ L + L VL + + +G R +VNL L + Sbjct: 584 LLAPTEFIQLAEESGLIVELGEWVLREACRQNMVWRQEGMRGLRVAVNLSGYQLQHSRLV 643 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + ++ + + + EITE N + ++ + ++ G I+IDDFGTGY++ Sbjct: 644 ETVRKVLDETGMPGELLEFEITESVIMQNPDYAVEVLNEITNLGIHISIDDFGTGYSSLA 703 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR + +KID FV+D+ NT DA I +I + + +L V+AE VET+QQ L Sbjct: 704 HLKRFSVNTLKIDKSFVRDVENNTTDAAIASAIIAMGSSLNLKVIAEGVETEQQMDFLRD 763 Query: 711 LGVQYLQGYLIGRPQPLA 728 +QG+LI RP P Sbjct: 764 NNCDQVQGFLISRPLPAD 781 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 678 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 130/755 (17%), Positives = 236/755 (31%), Gaps = 51/755 (6%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW 61 L + I+ F + ++ + + S + + + V L+ L I G Sbjct: 51 AAAVLTTSSAIWATHFIAMLAFAPGMAFGFALAPTVASFAVAV----MLVSLAALAIVGS 106 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 R + G L + + A T + G + Sbjct: 107 RTRHGAVAGGALIGLAIAGMHYTGMAAYRVQGTIAWDGQRVAVSVLAGIALSVLALRLSL 166 Query: 122 WQ---RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 L + + + ++ D VV +L+ A LI Sbjct: 167 APQRLARALAPLALLLAVCGAHFIGMGALSLRYDPRIALPDGSLDAAVVTILTANAAFLI 226 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 L I++ +R + + A + + Sbjct: 227 LGAALAALRLSILNHRRRVAERQRLRDLADIAVEGLLICDDDAIVG-------VNRSIER 279 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 I G L A + + E + I + Sbjct: 280 ILGRGREEVIGRALPD-------LLPGLSAAAIPLTHERDATLRDASGAEIPVRVIAQTI 332 Query: 299 ISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEA- 348 + L+ VR A D LT L N + Sbjct: 333 AIETRPHLVVAVRDQRDRLRAEAAITHLAHHDALTGLANRLRFNGVLAELLAERFAARRH 392 Query: 349 ---GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ G M +R + + LL ++ + + +L G E ++L Sbjct: 393 DPAPFALLILDLDRFKAVNDTLGHGMGDDLLRRVAQRLLRVVGAADVVARLGGDEFAILL 452 Query: 406 SGPETEGRLQHMVN---------ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 +G + + SR + LD+G + +T + LL Sbjct: 453 AGAGDAAGAGDLAAIQAAAERAIEILSRPFVIDGHILDIGASIGIALAPQDGDTPEQLLR 512 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 + E ++ + + L +R AL + + LY QP + Sbjct: 513 SADLALYGAKEEGRGR-FRMFEGTMNARMQARRSLELDLRRALARQEFELYFQPQVDART 571 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 +G + ++ + G+++P +F+PL + L VL + Sbjct: 572 GRFDGAEALIRWHHPERGLVSPGEFIPLAEETGLIGPLGEWVLRTACAEARRWAT---PL 628 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VNL P+ +A + + + + +EITE + ++ + +L Sbjct: 629 PVAVNLSPVQFRDPRLAATVRGILAETGLPGSRLEIEITEGTLMQDEHRTLAVLTELRGL 688 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G RI++DDFGTGY++ L+R D IKID FV+ + IVR+I L ++ + Sbjct: 689 GIRISMDDFGTGYSSLSYLRRFPFDKIKIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIK 748 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET QQ + G LQGYL RP P Sbjct: 749 TTAEGVETDQQSVFIAGEGCDQLQGYLYSRPVPAE 783 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 678 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 99/562 (17%), Positives = 204/562 (36%), Gaps = 28/562 (4%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVP 245 + + S A + + +++ ++ + GY Sbjct: 261 SELEKVLVQRDLALQHSQRNLYLANKIIDSSLDGIMITHSNSTIMQVNPAFTQLTGYKEH 320 Query: 246 VFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--- 299 + ++ + A++ + + Y + + Sbjct: 321 EVIGKCPSILSSGRHDKSFYIKMWDAINKTGVWQGEICNRKKNGDIYIEWLTIIEIKEPN 380 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + + A D LT LPN R + + Sbjct: 381 NSDAIYAAIFSDITERKNAEDKIVQLAYFDELTGLPNRRLFNDRLKMALAAAHRDQHLLA 440 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + + + + E + L +L G E +++ Sbjct: 441 VMFIDLDRFKEVNDSLGHSAGDCLLTLVAARIEATLNEGDTLARLGGDEFVVLCE-INKI 499 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + ++ + + + + + LL +S Sbjct: 500 DAVASLADKILNNLNSPFQLDHVEVGVTASIGAAVYPDDGLDSETLLKHADIAMYRSKDV 559 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILAR 525 + + ++ ++ +++ +++ + ALD + LY QP + + G + +L Sbjct: 560 GRN-SFQLFKPSMNARSLERLAMMSRFQHALDNNEFELYFQPKQCLKSEQIMGVEALLRW 618 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTL 584 D G+++P +F+PL + L R DL V+ K L + R ++N+ L Sbjct: 619 HDPDLGMISPAQFIPLAEELGLIVRLDLWVINQAGKVLTLWQKEGLVAGRLAINISACHL 678 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q +A I + K Y++ + +E+TE S+ + ++QL K G IA+DDFGT Sbjct: 679 SQGKLANNIGTMLKHYNLPGSLLEIELTESSFISSFTQAKTQLQQLKKLGVHIALDDFGT 738 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+ L +L D +KID F+ I ++ IV ++ LA +L VVAE VE Q Sbjct: 739 GYSALSYLTKLPFDTLKIDASFIAKIPDEYGNSQIVAALIALASNLNLMVVAEGVEQPAQ 798 Query: 705 QALLHKLGVQYLQGYLIGRPQP 726 + L LG +QGY RP Sbjct: 799 KNYLISLGCNVIQGYYYCRPLT 820 >UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDT9_TOLAT Length = 753 Score = 678 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 131/729 (17%), Positives = 252/729 (34%), Gaps = 61/729 (8%) Query: 31 ISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVML 90 + + + + +LS+ +FG ++ + + L + Sbjct: 46 VVGMMTPVQLEPGVIFDARSAILSMAGLFG----GALVATIAGVIAGVYRLWLGGATYGV 101 Query: 91 GSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFP 150 G T V+ + R + L+ + + ++ L+ S F FP Sbjct: 102 GILTIVISVILGLAYRAAHQRGWMSKGPIQL--------LLFGVLLHTAILLLFSLFPFP 153 Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 + + +F +TV + + ML + + I++ + Sbjct: 154 I-LHSFMQQIALPYTV--------SFALATMLLGLMLQDIINRT-------KTEQALQDS 197 Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIA----GYLVPVFFIIF----TLGVGKLRYPF 262 E R + ++++ Y + Y + I L Sbjct: 198 ESRLRAIVQAIPDLMVIIDEDGHYLDALPTTNNQFYPRALALIGSNLHSELPPETADRIL 257 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLN 319 + ++ + + L ++ ++++ R + Sbjct: 258 ATVRDSLRLQQTQTIEYERDFKMGQRL-VEGRAQPLGYTVNNKQVVIFLARDITDRKIKE 316 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 A DPLT LPN R L+ + + +DN + ++ G Sbjct: 317 DEIAWLAFYDPLTGLPNRRLLQDRLHQAMAGSKRSGQRAALLFIDLDNFKTLNDTLGHDK 376 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH-----MVNILN---S 423 ++ + L ++E + + +L G E +++L L + + Sbjct: 377 GDLLLQQVATRLFECVRECDTVARLGGDEFVVMLEELNHSEELAAAQSKMVGEKILVKLC 436 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + F +QE+ L+ + Q+ + L + + Sbjct: 437 QPYLIAGYEHNSSASIGITLFLAHQESSDELMKRADIAMYQAKSAGRN-TLRFFDNKMQA 495 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPL 541 T + L N +R L Q LLL+ QP + G + ++ G+++P F+PL Sbjct: 496 IVTSRAELENDLREGLRQQQLLLHYQPQVDVHGRIIGAEALVRWQHPSRGMVSPAHFIPL 555 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + L VL + L +VN+ + Q + +++ Sbjct: 556 AEESGLILSLGDWVLNEACRQLRRWAAQPAMAHLTMAVNISARQIHQPDFVDQVLAAIHT 615 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P + LE+TE + E + + L G ++DDFGTGY++ LKRL D Sbjct: 616 AGVQPYHLKLELTESLLLEDTEEIILKMTALKACGVGFSLDDFGTGYSSLAYLKRLPLDQ 675 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV D++T+ DA I SI LA++ L+V+AE VET+ Q+ L LG QGY Sbjct: 676 LKIDKSFVHDLLTDPNDAAIASSIITLAQSLGLNVIAEGVETEAQRQRLEALGCYTYQGY 735 Query: 720 LIGRPQPLA 728 L G P P Sbjct: 736 LFGHPVPAD 744 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 110/600 (18%), Positives = 209/600 (34%), Gaps = 34/600 (5%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 A LL + +L + + + H + A + A S Sbjct: 344 RWIAFGVAATLLCVMLVILWNVQMRRQVRMRTEALHAEIARREQTEAYLKISSRMARVGS 403 Query: 219 WLAALSVLLLLLCTPYENDF--IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST----L 272 W+ + L + + I + + + A+ Sbjct: 404 WVLS----LPEKTLYWSEEVLDIHECPPEFAPTLDSALAFYPEEWRSRIVQALEECLQKG 459 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + L + + I + + ++ + R A D Sbjct: 460 DSFDEELPILTCKDKLLWIRIIGQAVYDLHGNITRIEGAIQDISAQKVAESRIQHLAFYD 519 Query: 330 PLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN + E + + +DN + ++ G + ++ + Sbjct: 520 SLTSLPNRQLFIDRLEHTLAYSARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQQVAM 579 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN---SRQIHWNNTGL 433 + ++E++ + + G E +++L E + + + + + ++ Sbjct: 580 RIAGCLRESDTVARFGGDEFVVLLHELSGNHQEAAAQARLVSEKILISFAHPFQFSGYEH 639 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 FD T+ +L + QS A + + + +V + Sbjct: 640 HTSASIGVTLFDQQPTTVDEILKRADLAMYQSKAAGRN-VIRFFDPEMQALIADRVEMEE 698 Query: 494 TIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R L + L QP + G + +L G++ P F+PL L Sbjct: 699 DLRNGLRNDEFFLCYQPQVDNQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGLIVSV 758 Query: 552 DLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 V+ + K L +VN+ L Q + +I+ + +P+ + L Sbjct: 759 GNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPKRLKL 818 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE +N E + + +L G +IDDFG GY++ LK L D +KID FV+D Sbjct: 819 ELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQSFVRD 878 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++T+ DA+I R+I L K+ +L V+AE VET Q+ L G QGYL +P P + Sbjct: 879 VLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPADE 938 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 108/647 (16%), Positives = 216/647 (33%), Gaps = 22/647 (3%) Query: 103 ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADA 162 + LT+ + + + + A A Sbjct: 259 YGWTAAVGVPQSALTAGLAESLRQYAVGALALLLGGLALAGLLGRRIARPVQALVAPALA 318 Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 I + A+ + + L + H + + + Sbjct: 319 IGRGEPVSLPPLALEEADEVGRALAQAQELLHQREADRAQAEEKLALAATALDSAVEGVV 378 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 ++ + I GY + L + + A+ + Sbjct: 379 IARGGRIATVNRAFTSITGYRSAEVIGQPLAILLAEAEKTHRNDRRRAMCETGQWQGEVH 438 Query: 281 FLQGVETEYSLAFILA--VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + Y ++ S + L+ + ++ R A D LT LPN Sbjct: 439 GRRKNGEMYPAWSSISRAAYGSDEMILVCVFSDISAAKQYEARLQHLAHYDALTELPNRL 498 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + + + +D + ++ G +R + L ++ + Sbjct: 499 LFRERLADMLVRAERHGNMLALLFIDLDGFKPINDTLGHAAGDELLRRVAERLGGCVRAS 558 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL--DMGYGAAWGRFD 445 + +L G E ++L + + + R + G + Sbjct: 559 DTTARLGGDEFAVLLDELRSPEEAGIIARNILDTLERPYILAGQPQCQYISASIGIGCYP 618 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + LL Q ++ ++ Q ++++ + N++R ALD+ +L Sbjct: 619 SDSLDAETLLRQADMAMYRAKQEGKNR-YRFFAPEINAQASERLFMANSLRAALDRDELR 677 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L QP + E G + ++ G + P +F+ L + L VL + Sbjct: 678 LVFQPCMDFATLEVAGVEALVRWEHPQKGTILPSRFISLAEESGLIEPIGEWVLREAARR 737 Query: 563 LATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + R +VNL P + ++A R++ + ++P+ + LE+TE + E Sbjct: 738 VREWKNAGIFAGRVAVNLSPRQFRRSDLASRLLVVLDEAGLAPRDLELEVTEGMIMEHPE 797 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 ++ + +L G I+IDDFGTGY++ LKR +KID FV + + D + R Sbjct: 798 RAVVVLTELVAAGVSISIDDFGTGYSSLAYLKRFPVHSLKIDRSFVSGLPGDRNDRSLTR 857 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +AK+ LSVVAE VE Q L ++G + QG+ RP A Sbjct: 858 AVVAVAKSLGLSVVAEGVEHAGQVDFLRRIGCDFAQGHYFSRPLDPA 904 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 114/648 (17%), Positives = 220/648 (33%), Gaps = 44/648 (6%) Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 L + + G C L + I G+ D + T Sbjct: 47 AFLRHRPAVVLLDVEMPGGDGFDCCRALRALPEGRRVPIVMLTGNDDDASIASAFDAGAT 106 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 + M +++ + + E LA + Sbjct: 107 DFVSKPM----RWKLLGYRIRYLLRAAAAVEKLATTEVSLTHAQALAHVGNWEFQ----- 157 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV----------------STLCLLNYN 278 GY P + I L F L AV + + Sbjct: 158 -AGRTDGYWSPELYRILGLDAAHAPPTFERLLQAVPADEQPLLVQSFTSLRTEGVPFSLE 216 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + TE + + ++ +V+ + R A D LT LPN Sbjct: 217 HRLVHADGTERCVLHQAESGRDPNHAIILRGIVQDITERKMQQGRIEYLANHDALTGLPN 276 Query: 337 FRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L EQ + L +D + ++ +G + +R + L ++ Sbjct: 277 RNLLSDRMEQAMSQARRTGQLVAVMVLDLDRFKHINDSFGHSVGDGLLRVVAARLKRSVR 336 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 + + + +L G E +++L T+ + + + L + Sbjct: 337 DGDTVARLGGDEFVVMLVNLATQADADVIARKILDTFIEPFTLDEHDLHVTTSVGVSLCP 396 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + LL + H + + +Q +L N + A+ +L Sbjct: 397 TDGTNAETLLKTADAALYAAKEHGRN-CYRFYTRELGARVEEQTILENALHQAVANHELE 455 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + + G + ++ + G++ PD+F+P+ L VL + Sbjct: 456 LYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFIPIAEDCGLILPIGEWVLRTACMQ 515 Query: 563 LATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + R +VNL Q+++A + + ++P ++ LE+TE + Sbjct: 516 AVAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTTLEETGLAPDSLELELTESVLMQDCN 575 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + + + +L G +++DDFGTGY++ LK L D++KID F+ D+ T+ A + R Sbjct: 576 AIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTR 635 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 SI +A++ + VAE VET+ Q + L++ +QGY P + Sbjct: 636 SIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVTGDE 683 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 112/589 (19%), Positives = 208/589 (35%), Gaps = 31/589 (5%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + +V + + ++ + + Sbjct: 130 LQGTERYLAIDAGPVRDSSGRIIAVVETLRDRTSHKLAELRLRQ----MASVFEHSQEGI 185 Query: 226 LLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 ++ +L + GY + + L ++ + Sbjct: 186 MITDPATRILDVNASFVRVTGYSREEALGRTPTLLKSGLQDAAFYRALWRDLNETGRWHG 245 Query: 278 NQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + Y + + + M + R A D LT L Sbjct: 246 EIWNRKKSGELYPEILHINAVQDPSGRVTHYIGMFIDITDLKNSQSRLENLAHYDVLTGL 305 Query: 335 PNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN L Q + C L +DN + ++ H+G + I R L Sbjct: 306 PNRLLLGYRLRQALDDAQRHERLAAVCFLDLDNFKLVNDHHGHETGDRLLIDIGRRLRDT 365 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 ++ N+ + +L G E +++L+ + L +++ L + + + + + Sbjct: 366 LRSNDTVARLGGDEFVILLNDLRNQEELDNVLVRLLDGVAHPVRIDALQIVITVSVGVTI 425 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + LL Q+ + + + L IR AL G+ Sbjct: 426 YPLDDHDPDTLLRHADQAMYQAKQMGRNR-YQLFDPEAANAMQSRHRELERIRQALQHGE 484 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LY QP + + G + ++ + G++ P +FLPLI L VL L Sbjct: 485 FQLYYQPKVDMRLGQVVGMEALIRWRHPERGLVPPLQFLPLIEASPLIVEVGEWVLHEAL 544 Query: 561 KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSN 619 + + + SVN+ Q++ R+ + + +P+ + LEI E A + Sbjct: 545 GQIRQWCAEGRPLTISVNIAAHHFQQRDFVLRLQTILAEHPEATPRLLELEILESAALED 604 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 +S + G R A+DDFGTGY++ LK+L A+ +KID FV++++ ++ D I Sbjct: 605 IQSVRGIMTACQAMGVRFALDDFGTGYSSLSYLKQLPAETLKIDQSFVRNMLEDSEDLAI 664 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + LAK V+AE VET +Q LL + G + QGY IGRP P Sbjct: 665 IEGVIGLAKVFRKEVIAEGVETPEQGLLLMRFGCDHAQGYGIGRPMPAE 713 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 91/570 (15%), Positives = 197/570 (34%), Gaps = 29/570 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFI 239 R ++ I + + + + + ++++ ++ T I Sbjct: 174 AFHRKLLKIGSFIIGIALEQQKINEQLYLSSKVFENSTEAIMIADANKIIISTNKALHII 233 Query: 240 AGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 G+ + F + +V EY ++ Sbjct: 234 TGFTAEEVIGKPTSIVTSIRHSTKFFQKIWLSVKQSGHWQGEVWNRHKYGREYPAWLNIS 293 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + L + + QA D LT LPN Sbjct: 294 SVLSKKGSICYYLINFSNITDKKKSDEIIWRQANYDSLTGLPNRNMFYDRLSHDIKNAAR 353 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D + ++ +G + + + L ++E + + +L G E ++L Sbjct: 354 TGMLLAVLFIDLDRFKEVNDSFGHSVGDALLVEAAKRLNGCVRETDTVARLGGDEFTIIL 413 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 +G + + ++ ++ ++ H N + F + + + L+ Sbjct: 414 NGINDQHCAERIIQMILLELTKPFHLNAKLAYVTASIGVTFFPADAGSAEILMKNADQAM 473 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 + + + T + + +R AL + L L QPI Sbjct: 474 YAAKNNGRNCC-SYFTSNMRKATETRSRIAYELRHALREQQLFLMYQPIVKLATGSIHKA 532 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVN 578 + ++ + G ++P +F+ + + NL + V + + +A + + S+N Sbjct: 533 EALVRWQHPERGTVSPVEFISIAEESNLISEIGDWVFKQAVNQVAAWQANYNTNFQISIN 592 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 P + K + + ++I+EITE E + + G ++A Sbjct: 593 KSPKQFISK--MSDWVNHLHEQKLDGHSIIVEITENLLLDVHELVVKQLLNFRDAGVQVA 650 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LK+ D +KID F+ ++ + + D ++ ++ +A + V+AE Sbjct: 651 IDDFGTGYSSLSYLKKFDIDYLKIDQSFISNLDSRSNDRILCEAVITMAHRLGMKVIAEG 710 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q+ LL +G Y QGY +P Sbjct: 711 VETDSQKQLLIAMGCDYGQGYFFSKPLTTE 740 >UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89WT2_BRAJA Length = 833 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 119/772 (15%), Positives = 231/772 (29%), Gaps = 48/772 (6%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 I+ F + + + + S + +++ Sbjct: 50 VAIAGAAIGYGIWATHFVAMLAYEPGVPTNYGLVLTVLSLAAAMILTSGGFGVAVNNSGQ 109 Query: 61 WRGVVPVLC------GMFCTNLWNF----HLSFLQTAVMLGSQTFVVLCACAILRWQLGT 110 WR M +W +++ V++ +VL A+ Sbjct: 110 WRAAAGGGIIGAGIASMHYIGMWALEVPGRVTWSPGLVLISIGLGMVLGYAALAVALGHK 169 Query: 111 RWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL 170 + + T +G + D TF A A + L Sbjct: 170 DKWGTFAAALLLTLAIVSHHFTAMGAVQIVPDPTLASDTLSLSPTFLAVAIAGVALSVLG 229 Query: 171 SLFTAVLIYNMLFYYLTR---MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 F VL L +R +I A+ ++ R T ++ + Sbjct: 230 MSFVGVLADRRLATRTSRFEQIISELSLARQQVEDSQQEIQEQKLRLDTAINNMVEALCM 289 Query: 228 LL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN------ 276 + + + + + ++ Sbjct: 290 FDAEKRLVVCNERYARLYQLPPELLRTGTPHADIIRHRVVTGILKSDTSEGAAEQFLSKL 349 Query: 277 ----YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 ++ + E + + + A D LT Sbjct: 350 AALPFDAVSSRIDEFTDGRLICVTRQPMAGGGWVATHLDVTEQRRSEAKIAHMAQHDALT 409 Query: 333 LLPNFRALEQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN L + E + L +D + ++ G +R++ L Sbjct: 410 DLPNRVLLRERMEHAIAVTRNGGLDLAVLMLDLDRFKEVNDTLGHPTGDSLLRAVATRLR 469 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 E + +L G E ++ + + + + +G Sbjct: 470 ECTTETALIARLGGDEFAVIDYVTNPAVEAAALAENIRKALCEPFDLGDHRVTVGTSIGI 529 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + ++ + + A E + + L +R A+ Sbjct: 530 AIAPRDGNDSDVIMKSADLALYSAKSGGRG-AFRFFEPELDELMHARRNLERDMRDAIVG 588 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 L+ QP + + G++ +L G++ P +F+PL + L VL + Sbjct: 589 RQFELHYQPFVSPATGKVNGFEALLRWHHPQQGLVMPSEFIPLAEETGLIVPLGEWVLRA 648 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 A P R +VNL P K + +I ++P + LE+TE Sbjct: 649 ACAEAAKWP---PHVRIAVNLSPAQFRSKELVPVVIGALASSGVAPHRLELEVTETVIMH 705 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT-NTLDA 677 ++E+ + QL + G RIA+DDFGTGY++ L++ D IKID FV ++ + Sbjct: 706 DSEAVFAVLGQLRELGVRIALDDFGTGYSSLSFLQKFPFDKIKIDRSFVNELSSARAEAR 765 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + R++ A + + AE VET++Q +L + G QGY RP P +D Sbjct: 766 HLARAVVRFAVSLGKTTTAEGVETKEQLDILCEEGCLETQGYYFSRPMPASD 817 >UniRef50_C6WWM6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWM6_METML Length = 651 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 92/643 (14%), Positives = 209/643 (32%), Gaps = 42/643 (6%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 R L L +V +++ + ++ + + S+ Sbjct: 5 FRKRISKLDLIVLRIVGIYLAFGLLWIFATDSAL-----------FSLISSYEEFSILNT 53 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL----- 230 +F + + E+R + V + Sbjct: 54 YKGVAFIFVTALLLYSLFRRTLKKQQSIEQSLQASEERWKFALEGSGDGVWDWDIPSDHV 113 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQG 284 I GY G + L + + + Sbjct: 114 FRSARWSEIYGYAENEIIATAVAGRELVHPDDLAILISDVQNYFAGNSNVYISEFRLRCK 173 Query: 285 VETEYSLAFILAVL----ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + + + ++ + + A D LT LPN Sbjct: 174 DGSWKWTLARGMTVSKSADGKPLRMIGTHTDITNRKRSEAQVTHLAHYDQLTGLPNRVLF 233 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + L +D + ++ G + ++ + R L +++++ Sbjct: 234 LDRFKQDIKKAQRTGQIVTLMFLDLDKFKEVNDSLGHDIGDMLLKDVARRLENCVRDSDT 293 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 + ++ G E ++L+ ++ ++ + + ++ H + + + + + Sbjct: 294 VARMGGDEFTIILNDINSQVNIERIAQDILNQLTMPFHLGDEVIHVSTSIGISNYPKDDT 353 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 ++ LL + ++ + K++ L++ + AL+ +Y Q Sbjct: 354 EVELLLKNADQAMYVAKEQGRNR-YQYFTPVMQEEALKRMRLISDLWGALNDNQFRVYYQ 412 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 PI + ++ G++ P+ F+P+ L + + + Sbjct: 413 PIVELATGAIFKAEALIRWQHPTRGLVGPNDFIPVAEDTGLIVDIGDWLFNEVASQMVKW 472 Query: 567 PCDKKGPRFSVNLMPLTLLQ-KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + SVN P+ + I ++ +S + I+EITE +S + Sbjct: 473 KQHYPNLQVSVNKSPVQFRSVHDNCSNWIERLEQLGLSGENFIVEITEGLLLDARDSVVS 532 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + + G +IAIDDFGTGY++ L++ D +KID F +I N+ D ++ +I + Sbjct: 533 QLNAFREAGMKIAIDDFGTGYSSLAYLRKFDIDFVKIDRSFTSNITPNSSDMVLCEAIIE 592 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + V+AE VET +Q+ LL + QGYL +P + Sbjct: 593 MSHKLGMKVIAEGVETDEQRDLLRNADCDFAQGYLYSKPITVD 635 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 121/740 (16%), Positives = 248/740 (33%), Gaps = 36/740 (4%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 + ++ L + V ++ ++ +R + + Sbjct: 213 LHWLAAAAWVQGLAEMFFTLYGEVTDLFNLLGHVYKAVAYLMVYRAMFDAGVLAPFREMK 272 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 + FV + G + + + + + Sbjct: 273 LERSRLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDYDFFDKDLADF 332 Query: 138 CSM-YLVGSFFDFPLKISTFFG-DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + PL + AD + + + + + I Sbjct: 333 FREKDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLYLDGQAIGTLGIAHDITRRKR 392 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFT 252 + R A + T + +L GY V Sbjct: 393 IEADLRLAAAAFESQTAMLVTDANGV-------ILRVNQAFLRDTGYAVEECVGQTPRIL 445 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMV 309 + + ++ + + + + Y ++ ++ + + Sbjct: 446 RSGRHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLH 505 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLE 361 + + R H A D +T LPN L++ Q + +DN + Sbjct: 506 QDVSERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLFVDLDNFK 565 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GRLQH 416 ++ G + ++ + L +E++ + +L G E +++S T+ + Sbjct: 566 TLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSAAMQGAEA 625 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 L S N F G QE+++ L+ Q+ Q+ Sbjct: 626 AARYLLSELGRTFQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIYQAKGAGRN-T 684 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGG 531 + + + ++ + +R A+++ LL+ Q + EG + +L + G Sbjct: 685 VRFFDPSMEIALRERAAIEEALRYAIEEEQFLLHYQAQIGEDGRIEGAEVLLRWQHPERG 744 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNI 589 +++P F+PL + VL+ LA G +VN+ + L Q + Sbjct: 745 MVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQLRQPDF 804 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ + + P + LE+TE ++ E+++ ++ L G ++DDFGTGY++ Sbjct: 805 VEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTGYSSL 864 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL +KID FV+D++ + D I S+ LAK+ L V+AE VET+ Q+ LL Sbjct: 865 SYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEAQRELLA 924 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 +G QGYL RP P+ D Sbjct: 925 GIGCHCYQGYLFSRPLPIGD 944 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 129/753 (17%), Positives = 249/753 (33%), Gaps = 46/753 (6%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN--- 78 L+ ++ A++ + I + + M+ + R + + G Sbjct: 309 GALVMRRAMLATAAVMALTLIVALYCAIGAMVVAPMLRLQRTLRTLSRGNETLVHSASED 368 Query: 79 -FHLSFLQTAVMLGSQTFVVLCA-------CAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 + V +G + + G +R L +G Sbjct: 369 ELVRRICEVLVQVGDFRLACIAFDMPGQAPRIVATHGGGDVFRAALARADASHLAPAVGA 428 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML-------F 183 + L A + + + + A+ I Sbjct: 429 IAERRTVLVDDLGAVPAALRAAAEAAGCRALIAYPLCEGERVLGALTIGAARPGDLDQAG 488 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL--------LLCT 232 L + + I +R E ++ VL+ + Sbjct: 489 TALLKELAEDLAFGIATQRTAVARREAEVALRLRERAIESSSDGVLIFALGDDGPRIRDV 548 Query: 233 PYENDFIAGYLVPVF-FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + I G + L A+ + + + + Sbjct: 549 NPAAERILGMARALLVDAPAPALTVFAPGALAELGVALVCGRETHLEVEGERADGSPFWC 608 Query: 292 AFILAVLIS-FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 LA + + ++ +V+ R QA D LT LPN L+ Sbjct: 609 ECALAPVRAAGDAHVVCVVKDVTERVLYLRELERQAKYDGLTGLPNRYLLDDRLEQAIVA 668 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 E + +D+ + ++ + G +R L ++++ + + G E + Sbjct: 669 ARRHERLLGVAFIDLDHFKVVNDNVGHRQGDELLRQAASRLAAVLRDGDTAARQGGDEFV 728 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L E ++ L + ++ + + + LL Sbjct: 729 VLLPDLGDERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRDGGDGDTLLKHAD 788 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EG 516 Q+ A + ++ Q ++ L +R+AL+ G+L L QP + + Sbjct: 789 IAMYQAKAAGRN-VVRFFTAEMNIQVRDRLQLEGALRSALENGELHLAFQPQVDGGSGQV 847 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G + +L + G + P +F+PL + L VL + + + R + Sbjct: 848 IGAEALLRWQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAGRRLRIA 907 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ ++ RI + + P + LE+TE +AE + + +L + G Sbjct: 908 VNVSARQFRSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGVS 967 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY+++ L+R D +KID FV+ +V IV +I LA + + V+A Sbjct: 968 LALDDFGTGYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIA 1027 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET QQ L + G LQGYL GRP P A+ Sbjct: 1028 EGVETPLQQRQLFEFGCDELQGYLFGRPVPAAE 1060 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 103/431 (23%), Positives = 177/431 (41%), Gaps = 16/431 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + QA D LT LPN ++ +Q L +D + ++ Sbjct: 423 AQKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVND 482 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + ++ + L ++ + + + G E L+ + + + + + + Sbjct: 483 TLGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKL 542 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 +N L + + E Q LL ++ E + Sbjct: 543 SIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRN-NFQVFAEEMH 601 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 + Q+ L +R AL + + LLY QP + G + ++ G + PD+F+ Sbjct: 602 REALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFI 661 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L A VL++ + + R +VNL Q + I++ + Sbjct: 662 PLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLE 721 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 I PQ + LEITE A + E ++ +++L + G I IDDFGTGY++ LK + Sbjct: 722 TTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLN 781 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+DIV N+ DA I ++I L++ L VVAE VET QQ + L + QG Sbjct: 782 TLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQG 841 Query: 719 YLIGRPQPLAD 729 Y P P + Sbjct: 842 YYFCPPVPAIE 852 >UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Methylobacterium RepID=B1ZFY0_METPB Length = 833 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 142/771 (18%), Positives = 268/771 (34%), Gaps = 57/771 (7%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW 61 + + +++L F + ++ L + + L L I+ Sbjct: 50 LIAAAAVFGCSVWSLHFVAMLAFRPSAQAAYGLLP----TAASIGIAVTGALIALLIWCR 105 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 P+ + V + ++L A + LG +T+ Sbjct: 106 ADHHPLKLAAAGMVMAAAIAGMHYAGVGAMAANSLLLFDGAYVHASLGLCAILAVTALAR 165 Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 L LG + + ++ + G F ++ + + ++ + + Sbjct: 166 AGDLTGLGRRIEVSLWLALAICGLHFTGMTALTVAPAAP-----LEEGGAVLGSTQLGLA 220 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL----LCTPYEND 237 + ++ + A ++ R + + + R L LA +L+ + Sbjct: 221 VGLVSLVVLAAGLAALLMQRHLMRRRMDELSRMRLLGNLAHEVLLIHRDGRVVEINQAGL 280 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILA 296 + + L + L + L + Sbjct: 281 RLFETTLQEIVGRPLLDLFADADAPALLRRSRCRPEELRPEEFEIRTAAGLAVPVELSCR 340 Query: 297 VLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 + + + R + R AL D LT LPN LE+ E Sbjct: 341 AIEYLGRPATAVAL-RDLSQRRRDEARIRHLALHDALTDLPNRTLLEERLSLALETAAEN 399 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 A + L +D + ++ +G + + +L ++ + L ++ G E ++VL+ Sbjct: 400 GASVALVYLDLDRFKPVNDFHGHAAGDALLVQAAKRMLAELRPTDTLARIGGDEFVIVLA 459 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNT----------------------GLDMGYGAAW 441 T ++ L R H +++G A Sbjct: 460 HTRTLAQIAETAARLVAALGRPFHLEGQNEGEGKSEGKGEGTSEGKSEGLRIEIGASAGI 519 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + T + L + + E + Q + + + + A+ + Sbjct: 520 AVYPSDGSTAETLKRAADTALYRVKDEGRG-TVRFFEAAMDEQLQARRRIEHELSGAIPR 578 Query: 502 GDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 G+L LY QPI N E ++ ++ + G + P F+PL Q + R VL++ Sbjct: 579 GELQLYYQPIVNGRTGEIETFEALIRWHHPERGCVPPADFIPLAEQTDQIGRIGAWVLDT 638 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 A P R SVN+ P Q A + + RY + P ++LEITE Sbjct: 639 ACAAAAAWP---HPWRVSVNVSPKQFRQPGFAAGVAAVLGRYGLPPGRLVLEITEGVFIQ 695 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 +A ++ + L G R+A+DDFGTGY++ L+R + D IK+D FV+ + + Sbjct: 696 DATMAVEVLTALRTLGVRLALDDFGTGYSSLSYLQRFKFDKIKVDQSFVRRLGRHADTLT 755 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+IT L L V E VETQ+Q A+L +LG +QGYL RP P+ + Sbjct: 756 IVRAITHLGHNLGLQVTVEGVETQEQLAMLRELGCDQMQGYLFARPAPMTE 806 >UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2A5_METFK Length = 722 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 111/592 (18%), Positives = 217/592 (36%), Gaps = 27/592 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 ++ + L I + + +A Sbjct: 123 ALIISRRGMTDMPHGSTTGVLVLVTDCTEQELMSQKLMALIKEHDELKIALDAHAIVAVT 182 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 ++ + I+ Y + F +L VS+ + N Sbjct: 183 DARGVITRVNDKFCSISQYGREELVGSTHRIVNSGHHPKEFFQHLWRTVSSGQVWNGEVC 242 Query: 281 FLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 T Y + + + + + + + L + AL D LT LPN Sbjct: 243 NRAKDGTLYWVHTTIVPFLGEDGVPVQYIAIRADITQRKILEQSVQRMALYDDLTGLPNR 302 Query: 338 RALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 R + + + L +DN + ++ +G ++ + + L +++ Sbjct: 303 RLMVERLQMIREACVRSHRHGAVMFLDLDNFKEINDTHGHEQGDRLLKQVGQRLRENIRQ 362 Query: 390 NEKLYQLPGSELLLVLSGPE-----TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 + + + G E +++L+ + + ++ L S +N L Sbjct: 363 VDTVARAGGDEFIILLADLDEDPAKATAQAYNVAEKLRNALSTPYIFNRIVLHTSTSVGI 422 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + L ++ A + + + + + LL +R AL + Sbjct: 423 VMFSDKAKPKTELFKHADMALYRAKAQGKNR-ISMFDPSLQAEVLEYASLLADLRQALQR 481 Query: 502 GDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + LY QP+ + + G++ ++ + G++ P +F+P+ Q L VL Sbjct: 482 DEFRLYFQPVVNRDGKVIGHEALIRWIHPVRGMVLPGQFIPVAEQTGLIQEIGQWVLSMA 541 Query: 560 LKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 K L D K SVN+ + G++ ++ P+ + LE+TE Sbjct: 542 CKQLNVWSEDAVKSQWTLSVNVSAKQFRDMDFVGKVHDAIRQSGADPKRLWLELTESMFH 601 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 ++ ++ + L G ++DDFGTGY++ LK L D +KID FV+D++ + DA Sbjct: 602 TDIVQTIEKMRALQDIGVHFSMDDFGTGYSSLSVLKLLPLDQLKIDRSFVRDVIDDPNDA 661 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I LA +L+VVAE +E+ +Q L + G Q QGY G+P P+ + Sbjct: 662 AIVRTILALAGILNLTVVAEGIESSEQFDFLEQHGCQAFQGYFFGKPVPMDE 713 >UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMK7_THIDA Length = 738 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 113/686 (16%), Positives = 231/686 (33%), Gaps = 44/686 (6%) Query: 86 TAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV-G 144 ++ G + + + G + + L LG+ G + ++ Sbjct: 38 ILILEGMRRLLAARDYDVTTANGGCEALIAIGKQQFDVILLDLGMPDLSGAEVLRFVADR 97 Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 S + +S AI + + F ++ + + Sbjct: 98 SADTPVIVVSGDSTIDAAIRALRGGAADFVRKPYEPEELLRRVDNTLTRRRLERENNHIL 157 Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLG--VGK 257 EK L + + L + + GY + Sbjct: 158 QRLQQSEKWHRFLVNSSPDFIYTLDCDGRFTFVNDRVESLLGYTREDLLGQHYSTIIHEE 217 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQG-----------VETEYSLAFILAVLISFSVCL- 305 ++ N ++ + L Sbjct: 218 DLARAEHVFNERRAGDRSARNIEIRLKCNPGMRRPRLMNGRCKAVELTATGMYDEDATLF 277 Query: 306 -------LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + H QA D LT LPN Sbjct: 278 ERRFIGSYGVAKDVTERKQAEETVHYQAYHDLLTGLPNRALFRDHLALMLAQAKRSHKTL 337 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D+ + ++ G + + ++ L ++E + L +L G E ++L + Sbjct: 338 AVLSLDLDHFKVINDSLGHTIGDELLLAVGARLRQCLREGDTLARLGGDEFAVLLPTLLS 397 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 G ++ + + SR ++ + + + E + L+ Q Q+ A Sbjct: 398 RGDVEQICRKIIQVLSRPVYVKGHEIYISVSIGACVAPDDGEMIDSLIRQAEIAMYQAKA 457 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 L E + ++++ + +R AL + + +L+ QP + E G++ +L Sbjct: 458 QGRSR-LQFWEAGMQAPYSERMQIEADLRRALARNEFVLFYQPQVDTVSGEVRGFEALLR 516 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 G ++P +F+P+ + + VL +A R SVN+ Sbjct: 517 WWHPQRGFLSPAEFIPVAEESGVIVPIGDWVLREASAQMAEWRRAGLPQVRLSVNISARQ 576 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L + ++R + + + Q + LEITE + E++ + +L G R+AIDDFG Sbjct: 577 LESPDFVESVMRAVQVHALDGQQIELEITESLLMRDFEANAIKLGRLSASGIRLAIDDFG 636 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++++ L R +KID F++++ + IV ++ + + +L+VVAE VETQ Sbjct: 637 TGYSSFKYLSRFPIHTLKIDQSFIQELER-EENLSIVNAMVAMGRGMNLNVVAEGVETQS 695 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L ++ +QG+ P D Sbjct: 696 QLACLQQMQCHEMQGHYYSVPMSGHD 721 >UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2P9_BACS4 Length = 696 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 101/541 (18%), Positives = 211/541 (39%), Gaps = 26/541 (4%) Query: 214 AFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 +L ++ +L + + GY F V + ++ + Sbjct: 146 FRSLLKNSSSVNCILSAEGNVMYRSPSIEKVLGYKPEELAGPFFTIVHPDEHDYVRSRFE 205 Query: 269 VSTLCL---LNYNQNFLQGVETEYSLAFIL--AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + ++ I + ++ ++ H Sbjct: 206 NLLENPDKPQKLDVRLRHKEGNWRTVHVIANNRMDDPHIEGVIINYHDVTEMREAQQKIH 265 Query: 324 LQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT LPN R E+ E + + + ID +F++ G + Sbjct: 266 HMAYHDYLTDLPNRRYFEEQLEAELQDAKTNRSKLAVLFIDIDRFKFINDTLGHHVGDKA 325 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTG 432 ++ I L+ L+ E + + ++ G E ++++ E ++ + + + R I +++ Sbjct: 326 LKEIAEMLVSLVSEKDLIARMAGDEFMILVPHIEALDYVKELADSILKRMESPIVFDHYE 385 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L + + + E + +L ++ + + + + K L Sbjct: 386 LFVTGSIGISTYPESGEDISVILKNADLAMYKAKET-KENSFEFFTPEMEENSYKNFALQ 444 Query: 493 NTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R A+ + LY QP + + G + ++ G+++P F+P+ L Sbjct: 445 NDLRRAITNNEFELYYQPKVSASTEKVVGVEALIRWNHPTLGMVSPGHFIPIAEDTGLIV 504 Query: 550 RFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 V +++ K + S+N + +LQK + ++ L ++ + + Sbjct: 505 PIGEWVFDAVCKQVKRWENTGFPPLVVSLNFSAIQMLQKGLVTKVKNLLEKNQVEGHWIE 564 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 +E+TE + + +E L + G IAIDDFGTGY++ LK+ + + IK+D F+ Sbjct: 565 VEMTESLILEHDNDILNKLEGLKQLGIHIAIDDFGTGYSSLSYLKKYKFNTIKLDKSFIN 624 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DI T+ + I+ I L+ ++ VVAE VE ++Q +L KL LQG+ RP+P+ Sbjct: 625 DIHTSADNQAIITFIIQLSNQLNMKVVAEGVEIKEQHDILQKLNCDELQGFYFSRPKPVK 684 Query: 729 D 729 + Sbjct: 685 E 685 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 123/628 (19%), Positives = 228/628 (36%), Gaps = 41/628 (6%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 GI + F + TV L ++ I + Sbjct: 275 GIMAVLSGSLPIFSMEYPCHSNTEQRWFAMTVAPLWHRKIRGVVITHTN------ITNLR 328 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFI 249 A + + E R T+ + ++L+ + + + GY+ Sbjct: 329 QAISDREQAFSDIQISEARLRTIFDASPDALLISDAQGAITMANSRVEEVLGYMAEDLIG 388 Query: 250 IFTLG-------VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + L L L+ +E + L+ + + Sbjct: 389 QSIEALVPKSVNSAHSEHRSAYIEAPDRRLMLGGRTIKALRKDGSECEVEINLSRVDTDQ 448 Query: 303 VCLLYM-VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 ++ +R + + D LT LPN L + Sbjct: 449 GVMIASALRDISERRRAEGKIAELSFFDHLTGLPNRTLLMDRMKLAMTASYRDGKHCALL 508 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP----- 408 + +DN + ++ G + +R I L+ ++E++ + +L G E L++L Sbjct: 509 FIDLDNFKALNETLGHEIGDQLLRDIAPRLVASVREDDTVARLGGDEFLVLLVDLARTES 568 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E +++ + + S+ NN F G+ LL Q ++ Sbjct: 569 EAANQVEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFGHVV-ADDLLKQSDLAMYKA 627 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEIL 523 A ++ + + K+ + +R L + LL+ QP N G + ++ Sbjct: 628 KAEG-GASIHFFDPKMEEAVIKRAKIEADLRQGLIKKQFLLHYQPQIFSNGRMTGVEALV 686 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMP 581 G++ P F+PL + L + VLE+ K LA + +VN+ Sbjct: 687 RWQHPVRGLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSV 746 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q I + + +P+ + LE+TE N + + + L G ++DD Sbjct: 747 QQFHQPEFVDHIQEVIRVTGANPERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDD 806 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK+L D +KID FV+D++T+ DA I ++I +LA++ LSV+AE VET Sbjct: 807 FGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVET 866 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + Q+ L G QGY RP P+ + Sbjct: 867 EAQRNFLETSGCHSCQGYFFSRPLPIEE 894 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 108/598 (18%), Positives = 201/598 (33%), Gaps = 41/598 (6%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 A + + + I + A+ R Sbjct: 940 LPLAAGERHFLVVRFPLFDDDGAITGLCFQATDITARKRAEEQLRLAA-----------L 988 Query: 217 LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + A+ V++ +L + GY R + + Sbjct: 989 VFDRASEGVMVTDTEQRILTINDSFSTLTGYTRQEVVGKTPRLLRSDRMPREFYAEMWDK 1048 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQ 325 V+ L + + Y + + + + M + +R Sbjct: 1049 VTRLGVWQGEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYVGMFSDITKVRESQQRIEYL 1108 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN + +DN + ++ G ++ Sbjct: 1109 ATHDELTGLPNRALFNDRLNLALAHAERSRESVGVVFIDLDNFKVVNDTLGHETGDKLLK 1168 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 LL ++ + + +L G E +++L + L S H+ Sbjct: 1169 QAAMRLLECVRAEDTVARLGGDEFVVLLVN-ADRQQATLTAERLLTGLSTSYHFGEHECF 1227 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + F + L+ ++ H ++ Q +K++ L Sbjct: 1228 ISASIGLSMFPEDASDANSLMRNADSAMYRAKDHGKN-GFRFFSADLASQASKRLALETG 1286 Query: 495 IRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R A++ G+L ++ QP E G + ++ Y+G ++ P F+P+ Q +L Sbjct: 1287 LRRAIENGELFVHYQPQVRLECDTVVGAEALVRWR-YNGEVIDPVVFIPIAEQSHLIFAI 1345 Query: 552 DLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 D VL + + R SVN+ + +A ++ + + +SPQ + +E Sbjct: 1346 DDWVLGEACRQIIEWDRAGLPPLRISVNISARHFRKDGMAADLMDIVSAHGVSPQRLCIE 1405 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE + + + + +L + G RI+IDDFGTG+++ LKR +KI FV I Sbjct: 1406 ITEGVLM-DVDRAQRMLAELVESGLRISIDDFGTGFSSLSYLKRFPIHELKIARSFVDGI 1464 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T+ D I I LA+ +SVV E +E Q A L G QG+L +P Sbjct: 1465 STDADDRAIASVIISLARQLGMSVVGEGIERTGQHAELEAFGCHRGQGFLYAQPLAPD 1522 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 13/228 (5%), Positives = 37/228 (16%), Gaps = 18/228 (7%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 S + + D + Sbjct: 762 ASLQRFNSAAARLFKLGAAQTGRHLRDLPLPPDMPDLLADVQHVIDTQNARDRQIVNANR 821 Query: 177 LIYNMLFYYLTRMIVSPH------FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 Y + L R + + R + + + + Sbjct: 822 RHYALHIAPLLRDTQRIAGVILLFADNTSLYEVERSARETQVRLQAVMNNSVSLMAVKDA 881 Query: 231 -----CTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + + G+ + + A+ + ++ Sbjct: 882 PGRYQFANPKFEQTFGFATGEVIGKTDLQLFPEAVSDLFRESELEAIRLRKGIEREESLP 941 Query: 283 QGVETEYSLAFILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQAL 327 + L L + + + + L AL Sbjct: 942 LAAGERHFLVVRF-PLFDDDGAITGLCFQATDITARKRAEEQLRLAAL 988 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 97/563 (17%), Positives = 193/563 (34%), Gaps = 28/563 (4%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF--- 248 R + + + ++L + GY Sbjct: 137 RLATLVAELERAEGELSIAAVAFASQNGMVITDPKGVILRVNQSFTRLTGYSAAEAIGRT 196 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 + + ++ + Y+ + ++ + Sbjct: 197 PAVLKSGRHDDPFYQRMWNSLVEKGYWQGEIWNKRKSGQIYAELLTITAIVASGGITTHY 256 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + H A D LT LPN R L+ + + + Sbjct: 257 VASFSDITEDKQAEAEIHRLAYYDALTRLPNRRLLQDRLGQALAAAARHGLYGALFFIGL 316 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-TEGRLQH 416 DN + ++ G + + + + L ++E + + +L G E +L+L G Sbjct: 317 DNFKTLNDTRGHDVGDLLLVEVAQCLRAQVREGDTVARLGGDEFVLLLDGVSGNADEAAA 376 Query: 417 MVNIL-------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + SR + F +T++ L + Q+ Sbjct: 377 VAKEVGDKLREATSRPFSLDGQEYRCKLSIGVSLF-AALDTVEELFKRADLALYQAKNAG 435 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLK 527 L + + + L + + AL L L+ QP + G + +L Sbjct: 436 RDR-LRFFDPAMQAAMDLRGALESDLHQALALDQLRLHYQPQIDTAGRVIGVEALLRWWH 494 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLL 585 G+++P++F+PL L +LE+ + D + + +VN+ Sbjct: 495 PQRGLVSPNEFVPLAESTGLILPIGRWILETSCVLIKNWESDACTRSLQVAVNVSARQFR 554 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + ++ R K +P + LE+TE N E ++ + + + G ++DDFGTG Sbjct: 555 QADFVEQVKRSLKASGANPARLKLELTESVLLKNVEDTIAKMLAIKRLGVAFSLDDFGTG 614 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L +L D +KID FV+ + + I R+I + + ++V+AE VE++ Q+ Sbjct: 615 YSSLSYLAQLPLDQLKIDQSFVRKLPGARKEETIARTIITMGRELDMNVIAEGVESEAQR 674 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L G QGYL RP P+ Sbjct: 675 QFLEAHGCHAFQGYLFSRPLPVE 697 >UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N514_9GAMM Length = 1084 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 96/591 (16%), Positives = 202/591 (34%), Gaps = 25/591 (4%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 F G V +LSL ++ + I + ++ ++ A Sbjct: 483 FDGQRYDGSDVSMVLSLSQIRAAKGEVWVCVITDISTRKRTELQLQQTTTELNAILDNAM 542 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF----LNLTWAVST 271 + + + + GY + + +++ Sbjct: 543 VGIAFLRDRQFV---RVNEKFEELFGYTRDDIEGQSVQCLYLNEDAYLQFGEEAYHQLTS 599 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFS--VCLLYMVRIYHRSEWLNRRWHLQALTD 329 ++ + + + S +++ A D Sbjct: 600 GDNYEAQLEMVRKDGQVFWCGISGKAIDAGSPKAGTIWLFEDITIQRQNEEHLTRLASID 659 Query: 330 PLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN E + L +D+ + ++ G + + Sbjct: 660 GLTGLPNRAVFTDRVEHAIHKSMRNSGRLAVFFLDLDHFKHINDSLGHKAGDILLTEVAG 719 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYG 438 + ++E + + +L G E L+L + + + + + NT +++ Sbjct: 720 RIKACVREGDTVARLGGDEFTLLLEDVRSAEYVGKVAEKVIKSMTQPYQIENTEVNISPS 779 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + + L+ + ++ + K++ + +R Sbjct: 780 IGISLYPADGRDVDMLVRNADAAMYHAKKVGRN-NFQFYSAEMNAEAAKRLAMETALRRV 838 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 ++Q DL L+ QP N + G + +L G ++P +F+P++ + + + Sbjct: 839 VEQQDLHLHYQPQVNLQTGKLVGAEVLLRWQSEQWGNVSPAEFVPMLEDTGMITQVGEWI 898 Query: 556 LESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L +VNL ++A I RL + + LEITE Sbjct: 899 LRQACATYLEWSERLPDNFMMAVNLSGRQFKGGSLAAFIRRLLDETGMPAAHLELEITES 958 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + E + + +L +AIDDFGTGY++ LK+ +++KID FV+D+ ++ Sbjct: 959 MLMDDTELATITLAELSAMNISLAIDDFGTGYSSLSYLKQFPLNVLKIDSSFVRDVTSDK 1018 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 DA IV +I ++ + L VVAE VET +Q+ L + + QG+L + Sbjct: 1019 DDAAIVDAIMAMSNSLGLKVVAEGVETAEQRQYLLRHDCRLAQGFLFSKAV 1069 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 104/564 (18%), Positives = 193/564 (34%), Gaps = 39/564 (6%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFI 249 R I + +R + + +L + + G V Sbjct: 387 EDITERERAIEELSEQYRRFDAALNNMSQGLCMLDSSLRVIVCNRRYIEMYGLSPDVVKP 446 Query: 250 IFTLGVGKLRYPFLNL----------TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 ++ L + V L + + L Sbjct: 447 GISMREIMDHSCELGIHPDTTGAKLYADYVERLREGEHTLHRHLSDGRIIKLNHK----R 502 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KS 351 + R A D LT LPN + + + Sbjct: 503 MELGGWVVTYEDVTERHKAQARVAHMARHDSLTDLPNRTLFREKMGEGLNQVAIAGGAMA 562 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 C +DN + ++ G +R + L + E++ + +L G E ++ GP+ Sbjct: 563 VLCFDLDNFKTVNDRLGHAAGDRLLRWVAARLKENVGEHDTVARLGGDEFAVLQRGPQ-P 621 Query: 412 GRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + +G + L+ Q+ A Sbjct: 622 QSAEKLARRLVEIIGHPPPLESQSIHVGVSVGIAIAPDHGLDADELMKCADLALYQAKAR 681 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 A E + + + L + +R AL+ + L QP + E G++ +L Sbjct: 682 GRG-AYQLFEPEMEEEARSRHALEHNLRGALEAREFHLVFQPQVRLESSELTGFEALLRW 740 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 G ++P +F+P+ + L VL + A+ +VNL P+ Sbjct: 741 KHPSRGFVSPAEFIPIAEENGLIVPIGEWVLRTACATAASW----PDVTVAVNLSPVQFR 796 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + +A + + PQ + LE+TE ++E+++ + QL G R+++DDFG G Sbjct: 797 ARGLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATIEILHQLRALGVRVSLDDFGVG 856 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L++ D IKID FV + + IVR+I L + AE VET++Q Sbjct: 857 YSSLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEGVETEEQL 916 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 + + G +QGY GRP P A+ Sbjct: 917 DFVRECGCTAVQGYYFGRPCPAAE 940 >UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacillaceae RepID=C5D6R4_GEOSW Length = 951 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 108/625 (17%), Positives = 210/625 (33%), Gaps = 32/625 (5%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 I ++ V F + + D D +L+L ++ I Sbjct: 318 ITTTLEQVAPTFTPFIFVELVIKDRDIRSATFSMLALSEGNQNGENSSASVSLSIPEMFQ 377 Query: 196 AQILWR-------RDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYL 243 + R++ + + +L V L + I GY Sbjct: 378 GVMTLANLMSTSSREMERLRVHVQISQSLFEHNTDIVYSTDLHGNFTNVNPAFEKILGYT 437 Query: 244 VPVFFIIFTLGVGK--LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--I 299 L + + YN + Sbjct: 438 KEEILHTNALKYMHPNDVPRVSRHFYRALRGKIQYYNLEIPTKSGETLLFQIKNVPIIVD 497 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKS 351 V + + R + + A DP T LPN + ++ + Sbjct: 498 GKKVGIYGIGRDITEQKKAEEKISYLAYYDPDTHLPNRTKFMEIIDEQLEKAKQKNRKLA 557 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G ++ + + + ++ L + G + L+L+ Sbjct: 558 VVFIDLDRFKLVNDSIGHYAGDEILKQVVQRIQHVLPAGAYLGRFHGDKFCLLLTERTDS 617 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + ++ I + N + + + LL ++ Sbjct: 618 EGVFKTAAHISKEVMKPIVYENKEFFITISIGISFYPNDGVDKHSLLKNADIALNKAKQS 677 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + ++ +T ++ + +R AL+ + L QPI + G + ++ Sbjct: 678 GGNR-IQFYSAKMNEETLYRLEMERYLRKALENQEFFLCYQPIIDIHKGVIVGNEALIRW 736 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL 584 G++ P++F+ L + L VL + K + SVN+ Sbjct: 737 RHPKLGLVRPNEFISLAEETGLIHEIGRWVLVTACKQTKKWQQLWNQQLFVSVNVSARQF 796 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + + ++ +SP + LE+TE N S+ +++L + G IAIDDFG+ Sbjct: 797 QHEGFIDDVKQALEQSQLSPNCLHLELTENSMLRNLHYSIQVMKELQQLGVGIAIDDFGS 856 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GYA++ LK L +I+KID FV+ + TN+ D IV++I + L VAE VET +Q Sbjct: 857 GYASFSYLKNLPVNILKIDRSFVEQMHTNSSDIAIVKAIITMGHGLGLKTVAEGVETVEQ 916 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 LL L + QGY + RP + Sbjct: 917 LELLKMLHCHHAQGYALYRPVTAEE 941 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 90/565 (15%), Positives = 196/565 (34%), Gaps = 32/565 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF- 247 I A+ + + ++ T + GY Sbjct: 446 DITKRKLAEESMQLASMVYQNSREAMTVTDSNGN------IITTNPAFTEMTGYSADEIT 499 Query: 248 --FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 F + + + + + A+++ + Y + + + Sbjct: 500 GKSHTFIVSKQQDKRVYQRMELALNSTGHWRGEVSCRHKNGENYMALLGINSIYNEDRSV 559 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + + + QA D LT L N + + Sbjct: 560 HRRVAQFSDITERKKSEKIIWKQANFDNLTGLSNRQMFHDQLLHEKNKAQRRGLNVGLLF 619 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G M + + + L +++ + + + G E +++ G + + Sbjct: 620 LDLDRFKAVNDTLGHNMGDQLLIDVAQRLRNCVRKRDLVSRFGGDEFTVIIGGLKNTQSV 679 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + + + + + E + LL + Sbjct: 680 ERVAQKILCELAEPFLLGEQNVYITPSIGITFYPKDGEATEMLLKNADQAMYSAKEKGRN 739 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 + Q + L N +R AL + L LY QPI + + ++ Sbjct: 740 -CYHYFTNSMQEQVERGGQLANDLRYALKKNQLELYYQPIVALGTGQIRKAEALIRWHHP 798 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 + G+++P +F+P+ + V +A + + + S+N P+ + Sbjct: 799 ELGMVSPAEFIPIAEETGTIVEIGDWVFRQAADQVAHWRREYQNDFQVSINKSPVQFREG 858 Query: 588 --NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES-SMYNIEQLHKFGFRIAIDDFGT 644 +I + L + QAV++EITE + + + G +++DDFGT Sbjct: 859 GSDITSWLEHLLAL-GLPGQAVVIEITEGLLLDGSSRIVIDKLLAFRDSGIEVSLDDFGT 917 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L++ D +KID FV+++ ++ D ++ +I +A + V+AE +E ++Q Sbjct: 918 GYSSMSYLRKFHIDNLKIDQSFVRNLKVDSDDMILCEAIIIMAHKLGMQVIAEGIENEEQ 977 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + LL G Y QGYL +P P D Sbjct: 978 RRLLSAAGCDYGQGYLFAKPLPEKD 1002 Score = 85.4 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 22/322 (6%), Positives = 78/322 (24%), Gaps = 28/322 (8%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPL------CVMLSILFIFGWRGVVPVLCGMFCTN 75 L+ FI +A + +F + + ++ I+ + W ++ Sbjct: 15 AALLLAMFFIYDMAAFRNRTVFGFYWAIFTGIALGLIGIIIMLTPWEYAPGIIVDSRAVL 74 Query: 76 LWNFHLSFLQTAVMLGSQTFV-VLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 L L F ++ + +G + + R + ++ + Sbjct: 75 LGISGLFFGTIPTLIAMVITATLRLFQGGGAAVIGVLVIITSGTLGIAWRYYRPHPLSEL 134 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 + L ++ F + + ++ + + + Sbjct: 135 SFREIYLFGVIIHGVMLALTFIFPWEMTLAVLSNISLPVLLLYPLITALLGMLFVQRLRR 194 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFI 249 + E + L ++ + + L I GY + Sbjct: 195 N------QSTDALKESEFLFRSQFDLGSIGIAITYPGKGWLRVNPRLCEILGYREEELLL 248 Query: 250 I------FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA--VLISF 301 + Y + + + ++ F++ + ++ + Sbjct: 249 LNWSELTHPDDRHLDLYQYDQMLT--GEEDGYSLDKRFIRKDGESVYVHMTISCYRVDGA 306 Query: 302 SVCLLYMVRIYHRSEWLNRRWH 323 ++ + + + Sbjct: 307 VQFVIAGILDSSERKHAEDKIR 328 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 30/367 (8%), Positives = 74/367 (20%), Gaps = 64/367 (17%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAW------MPLCVMLSILFIFGWRGVVPVLCGM 71 TL + + I L II S + +AW + +++FG + V+ + Sbjct: 95 ATLRLFQGGGAAVIGVLVIITSGTLGIAWRYYRPHPLSELSFREIYLFG-VIIHGVMLAL 153 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 W L+ L + + ++ A + + R + + LF Sbjct: 154 TFIFPWEMTLAVLSNISLPVLLLYPLITALLGMLFVQRLRRNQSTDALKESEFLFRSQFD 213 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA---------------- 175 Y + ++ G + +++ L Sbjct: 214 LGSIGIAITYPGKGWLRVNPRLCEILGYREEELLLLNWSELTHPDDRHLDLYQYDQMLTG 273 Query: 176 -----------------------------VLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 V A+ R Sbjct: 274 EEDGYSLDKRFIRKDGESVYVHMTISCYRVDGAVQFVIAGILDSSERKHAEDKIRGRKEQ 333 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 L + W ++ + + GY ++ + + Sbjct: 334 LLSVLSGSELGFWDW--NIEANTVHRNARWAEMLGYRFEDIQNDTSINLDSVHPNDCGRV 391 Query: 267 WA------VSTLCLLNYNQNFLQGVETEYSLAFILAVL----ISFSVCLLYMVRIYHRSE 316 W + ++ + + + + Sbjct: 392 WQSVTDHLEGRTAQHKIEYRMRTRQGEYKWILDCAKIVNYGEDQQPLRMSGTHTDITKRK 451 Query: 317 WLNRRWH 323 Sbjct: 452 LAEESMQ 458 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 98/555 (17%), Positives = 192/555 (34%), Gaps = 23/555 (4%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLA-ALSVLLLLLCTPYENDFIAGYLVPVFF---I 249 + + + A ++ I GY Sbjct: 18 QRRVEELSQQVERLSLYQAVFDNAFEGMFATDAANRIIAVNPAFTAITGYAAEEAIGNDP 77 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---L 306 + + +ST L + + + Sbjct: 78 RMLSSGFHDPAFYQEMWDQLSTTGQWQGEVVDRHKDGRPVRLWLSITSQRGADGKVARRI 137 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + R + + ++ DPLT LPN + + + + +D Sbjct: 138 AVFRDVTEARETAEQLWQRSNFDPLTELPNRNLFLDRLLQALVLAGREGSKVAMLFIGLD 197 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + ++ R +++ + + G E +VLSG ++ ++ Sbjct: 198 GFKNINDSLGHWIGDKVLQEAARRFQNCLRQGDTAARFGGDEFTVVLSGVRATAEVEAVI 257 Query: 419 N---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + + G+ E + L+ + +Q+ Sbjct: 258 RSVLEVLQEPFVVEHHHILISCSIGVCMWPGDGEDVDSLMRNATAALQQAKQAGRN-TFR 316 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + + + L + + AL QG+ L QP+ + + + +L G+ Sbjct: 317 FFTPAMDARAQARSRLADELSGALSQGEFHLVFQPLVDVKSGKVNAAEALLRWHNRYLGV 376 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAG 591 ++PD+F+PL + L +L + + +VN+ P Q +I G Sbjct: 377 VSPDQFVPLAEEIGLIRPIGEWLLTAACREALVWQGMGLGEINIAVNISPRQFQQGDIVG 436 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I R + + P + +EITE SN E + +E + G +++DDFGTGY++ Sbjct: 437 IIRRALEDTRLPPWLLTIEITEGLLLSNGEEILAKMEAIRTLGVSLSVDDFGTGYSSLSY 496 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK D++KID F+ D+ ++ DA +V +I L + L VVAE VET+QQ + Sbjct: 497 LKSFPVDVLKIDRSFIADMGDHSDDATMVEAIIALGHSLHLEVVAEGVETKQQLDFITAQ 556 Query: 712 GVQYLQGYLIGRPQP 726 G QGY P Sbjct: 557 GCDVAQGYYFSPPLS 571 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 103/574 (17%), Positives = 194/574 (33%), Gaps = 21/574 (3%) Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 + AV ++ +++ A + + ++ Sbjct: 40 ATLLAVDPIGIVTDSFEQVLEHLQKTNSELAATRDELQAIFDSAGGAIVVVDEKMEVVAC 99 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + + AG + + + T QN Y Sbjct: 100 NSYSQWALFAG--ERNVMGKNLRSLICGHDQEECILEQILTTQR-RVEQNDFLHDGRHYH 156 Query: 291 LAFI-LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--- 346 L L ++ + A D LT LPN L+ Q Sbjct: 157 LVGTPLKNHDGAISRVVLLYTDITERRAAAEEIERLAFFDSLTGLPNRVLLKDRLAQLLT 216 Query: 347 -----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G ++ + L ++ + + +L G E Sbjct: 217 RAGRYNEMVAILFIDLDRFKEVNDTLGHGTGDQLLQVVSERLTACLRSCDTVARLGGDEF 276 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +++L G + + L + + + + + + +++ L Sbjct: 277 VVLLPGITERDCVGDIAAKLLQSLCKPVQLDAREVFTSGSIGISLWPIDGDSVSTLFKNA 336 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 + + + +Q+ L N +R AL++G+L L QP + Sbjct: 337 DTAMYHAKEQGRN-TYRFYTPQMHATSMEQLTLSNDLRYALERGELHLCYQPQVSFETGG 395 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PR 574 G + +L + G++ PD+F+PL L VL + R Sbjct: 396 LIGVEALLRWIHPKLGMIPPDRFIPLAEDTGLIVPIGTWVLHEACRQAMMWVAQGLPSLR 455 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ + + + + + + ++P + LE+TE N + ++ L G Sbjct: 456 VAVNISAKQFRESDFSDTVKAVLQTTGLAPNLLELELTEGMLIENVTQTKLTLQSLKDMG 515 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD-AMIVRSITDLAKAKSLS 693 +AIDDFGTGY++ LK D +KID FVK+I + D A IV ++ L + L+ Sbjct: 516 VTLAIDDFGTGYSSLSYLKHFPLDRLKIDKSFVKEIAEKSGDAAAIVEAVVALGHSLKLT 575 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 V+AE VE Q Q LH LQGY RP Sbjct: 576 VIAEGVEQQDQVDFLHNRKCDELQGYFFSRPLTP 609 >UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Rhizobium RepID=B6A0H8_RHILW Length = 730 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 110/680 (16%), Positives = 216/680 (31%), Gaps = 43/680 (6%) Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY 141 + F V L+ + R L Sbjct: 40 FAEGIIAAIPDVLFEVDEDGRYLQVWTRNPELLAQQKEMLLGRTVNDVLAPDQAAIAMEA 99 Query: 142 LVGSF---FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 L + + I + + + + + +A +R I A+ Sbjct: 100 LRDAGKEGVAYGRCIRISLPNGETRWFELSIAKRPSADPAAATTLLAFSRDITERKQAED 159 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPV------F 247 ++ + + + + + + G Sbjct: 160 AINSVRTQL-------LSVLQTMPDMIWVKDMNGVYLLCNHTFERLTGMAEAEVVGKTDL 212 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVC 304 + + A + Q L +I V Sbjct: 213 ELFDIERARFFQQSDKAAIKAGECILSDE-EWVVSQENGQTILLETRKVPVIDAAGEVVG 271 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 +L + R ++ H A DPLT LPN Q + Sbjct: 272 VLGVARDVTELNVSRQKIHQMAFYDPLTSLPNRSLFNDRLRQMITSAGSRGQRAGLMLID 331 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 ID+ + ++ G + + L +++++ + +L G E ++L L Sbjct: 332 IDHFKVVNDTMGHPVGDDLLCQAAARLNASVRDHDTVARLGGDEFAILLPDISQGDDLGR 391 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + N + + + + + + + L+ + + Sbjct: 392 IANNILDKFRERFLLDGQEVFVSCSVGIALYPDDSADANDLVKYADSAMYLAKRSGRN-S 450 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + ++ +++ L + +R A+++G+L L+ QP + G + +L + Sbjct: 451 FRFYSKDLTASAEERMRLESDLRRAIERGELELHYQPKVLLDSGAMVGCEALLRWRHPEM 510 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNI 589 G++ P +F+P+ L VL + A D + P + ++NL + Sbjct: 511 GMIPPVRFIPVAEDTGLIVELGRWVLHEACQTAAELNADSRSPHKVAINLSVKQFQSAGL 570 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I ++ + V +EITE + ++ + +L GF IAIDDFGTGY+ Sbjct: 571 VKSIAQIIDETGCRAEWVEIEITESLLLDQKDETLQALSELRSMGFSIAIDDFGTGYSAL 630 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L R D +KID F+ T+ + +V++I +A+ SVVAE VET +Q A L Sbjct: 631 NYLARFPIDTLKIDRSFIN--STDRRNEELVKAILSIARCLGQSVVAEGVETAEQAAFLV 688 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 G QG+L + P AD Sbjct: 689 ANGCGTAQGFLYSKAVPKAD 708 Score = 53.8 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 12/139 (8%), Positives = 28/139 (20%), Gaps = 5/139 (3%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 I A+ ++ + + G L + L + E ++ Sbjct: 23 DIAEHKQAERELKKALEFAEGIIAAIPDVLFEVDEDGRYLQVWTRNPELLAQQKEMLLGR 82 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL----AVLISFSV 303 + L + L A + + + + Sbjct: 83 TVNDVLAPDQAAIAMEALRDAGKEGVAYGRCIRISLPNGETRWFELSIAKRPSADPAAAT 142 Query: 304 CLLYMVRIYHRSEWLNRRW 322 LL R + Sbjct: 143 TLLAFSRDITERKQAEDAI 161 >UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Chroococcales RepID=B7KBH1_CYAP7 Length = 712 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 92/434 (21%), Positives = 164/434 (37%), Gaps = 16/434 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + ++ QA D LT LPN Q QE + L +D + Sbjct: 260 DITERKRTEQKLKYQAFHDVLTGLPNRIWFNQQLIAALNNAKRQETPLAILFLDLDGFKN 319 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G ++ + LL ++ + + + G E +++L + + Sbjct: 320 INDTLGHTFGDQVLQKFGKRLLGSVRAGDTVCRWGGDEFVVLLPYISHTEDSIKLAQRIL 379 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + E + LL ++ Sbjct: 380 DVLKHPFEIQKQQFYIKTSMGISIYPQDGEDGETLLKNADAALYRAKERGRNH-FQFYST 438 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 ++ + + + L N + AL+ +L LY QP E G + +L + G ++P Sbjct: 439 TMTTKASLVLRLENLLHRALENQELSLYYQPQVKIKTGEITGIEALLRWTHPELGQVSPH 498 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIR 595 K +PL Q +L L++ + +VN Q N+ I + Sbjct: 499 KLIPLAEQTDLIIPIGQWALKTACQQSLDWQKLGIKPLPIAVNFSARQFQQPNLVTLINQ 558 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + ++P + LEITE N + + +E+L + G I++DDFGTGY++ L++ Sbjct: 559 VLEETGLAPNLLELEITETTIMQNEDFARQALEELRQMGVHISLDDFGTGYSSLSYLQKF 618 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +KID F + N D I+ +I L L V+AE VET QQ +L +L Q Sbjct: 619 PLTTLKIDQCFTHSLKDNPQDLAIISAIITLGNHLQLRVIAEGVETLQQLEILQRLHCQE 678 Query: 716 LQGYLIGRPQPLAD 729 QG+ RP D Sbjct: 679 AQGFWFSRPLNSED 692 >UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Nostocaceae RepID=B2JAQ5_NOSP7 Length = 1043 Score = 673 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 110/587 (18%), Positives = 209/587 (35%), Gaps = 27/587 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + + + I A+ + G + W + Sbjct: 441 LWAIISCAPLLDDQGNYAGALGMVTNITDRKLAEAALQESKQRLDGILCSLEDVIWSISA 500 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFF----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 L + GY V FF + F + + + + Sbjct: 501 DTFET-LYLNPAALKVYGYSVSEFFENSNLWFEVIHPEDQQQVHAAIQPLFLTEKQELEY 559 Query: 280 NFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 ++ L ++ + S + + + L + A D LT LPN Sbjct: 560 RIVRPDGQVRWLLNRSHLIYNASGLPIRIDGIATDITERKLLEEKLVHNAFYDALTGLPN 619 Query: 337 FRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 EQ + L +D + ++ G ++ + ++ + L + Sbjct: 620 RILFIDRLEQAIAQMKHNPDDLFAVLFLDLDRFKVVNDSLGHLVGDQLLVTLAQRLQQCL 679 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 Q ++ + +L G E ++LS +T + + + + M Sbjct: 680 QPDDTVARLGGDEFTILLSHIQTIEDATDIAKHIHQALKPPFNLCGYEVFMTASIGIALG 739 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 LL ++ + + + + + + L +R A+++ +L Sbjct: 740 TNKYVQPADLLRDADTALYRAKEQSQAGHI-VFDTTMYDRAVELLQLETDLRWAVERQEL 798 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 ++ QPI + G++ ++ + G+++P +F+P+ + L VL K Sbjct: 799 CIFYQPIICIKTGKITGFEALVRWQHPERGLISPTEFIPVAEETGLIIPIGQWVLTESCK 858 Query: 562 WLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 L +VNL Q ++ +I ++ + +S + LEITE + Sbjct: 859 QLRQWQLQFPAIKPLTLNVNLSGKQFSQPHLIEQISQILQDTGLSSSNLKLEITETAIIA 918 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + + ++QL FG ++ IDDFGTGY++ L D++KID FV I ++T Sbjct: 919 SPQKATSILKQLKAFGLQLCIDDFGTGYSSLAYLHNFPIDVLKIDRSFVNRIDSDTEQFA 978 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 IVR+I LA +SVVAE VET Q A L L Q QGYL +P Sbjct: 979 IVRAIVTLADNLGMSVVAEGVETINQLAQLQLLQCQQAQGYLFSKPL 1025 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 11/139 (7%), Positives = 25/139 (17%), Gaps = 9/139 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 I ++ + ++ + I GY Sbjct: 217 ISPLQEPEVDLHLMERAIAASSNGIILTDPNQPDNPII---YVNPAFELITGYCASEVIG 273 Query: 250 I---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--- 303 F G + L A+ + + + LA + S Sbjct: 274 RNCRFLQGNDLEQVALQELRSAIQEQRECHVILRNYRKDNFLFWNELYLAPVFDNSGYLT 333 Query: 304 CLLYMVRIYHRSEWLNRRW 322 + + Sbjct: 334 NFIGIQTDITHHLQALEAL 352 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 673 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 109/618 (17%), Positives = 213/618 (34%), Gaps = 39/618 (6%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP----HFAQILW 200 D + ++ F D+ + L + + ++ + Sbjct: 81 LVVDAEMALADFTTDSLSYRASDLLRGFIVTEAGRYLGVGTVLALLQAANETNRRGVEAL 140 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFFIIFTLG 254 A + + V + + + G+ Sbjct: 141 ALAKAEVERAQTFMTGIVEAMPAMVFVKRADDHSYVLLNRAGEKTLGFKRDEVIGKTDAD 200 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFL------QGVETEYSLAFILAVL---ISFSVCL 305 + L L + + + L L + L Sbjct: 201 IHDAE--LAALYRERDRAVLDSGEVRVIEEDHVPRKDGGMAILRTKKIALLNAEGRAEYL 258 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 L + + + A DPLT LPN +++ + + + + Sbjct: 259 LGVSEDIAERKRAEAQIARLAHYDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDL 318 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + ++ L ++E + + +L G E +V +G + + Sbjct: 319 DRFKTVNDTLGHPLGDALLKIAAERLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATRL 378 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + +G + + LL + ++ A A Sbjct: 379 AARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRG-AY 437 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 E + Q + L +R AL G+ L+ QP+ ++ G + +L + G Sbjct: 438 HFFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERG 497 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 +++P F+PL + L + VL A P R +VNL P + + Sbjct: 498 MVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWPE---HVRLAVNLSPAQFRDRGLVR 554 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ + Q + LEITE +++++M + L G RI++DDFGTGY++ Sbjct: 555 TVVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSY 614 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+ D IKID FV+DI+ ++ I++++ DL + + AE VETQ Q L + Sbjct: 615 LRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQ 674 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGY I RP P ++ Sbjct: 675 GCAEIQGYFISRPAPASE 692 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 673 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 106/615 (17%), Positives = 191/615 (31%), Gaps = 29/615 (4%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVD--LLSLFTAVLIYNMLFYYLTRMIVSPH 194 L + + T + ++ F R + Sbjct: 202 AFFHKLWDTILAGRIFQETLVNRRKDGGLFYEEKTIAPLFDEGRGIAGFVSTGRDVTDRI 261 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 + + + T L + Sbjct: 262 RDEQTRGQLLEILEAT-----TDFVAIIEGDGRLRYLNRAGRAVLGLTATEDVSSRHIAQ 316 Query: 255 VGKLRYPFLNLTWA---VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 L A E ++ ++ + + Sbjct: 317 CHPEWATHRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTI 376 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNL 360 R + + QA D LT LPN LE S L IDN Sbjct: 377 ARDITERKHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDNF 436 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G +R + L ++ + + + G E +VL + +++ Sbjct: 437 KRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAILHK 496 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + + + + + + LL +S A Sbjct: 497 VRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNR-YQFY 555 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMT 534 ++ + + + L +R ALD+G+ L+ QP + G + +L G++ Sbjct: 556 APEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIA 615 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P F+PL+ L VL + R SVN+ + + ++ Sbjct: 616 PGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQV 675 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ + + P + LEITE A + ++ + L G R+AIDDFGTGY++ LK Sbjct: 676 EQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYLK 735 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D +KID F++D + A I + L L VVAE VET +Q A L + Sbjct: 736 RFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRAC 795 Query: 714 QYLQGYLIGRPQPLA 728 +QG+ RP P Sbjct: 796 DLIQGFHFSRPLPAD 810 Score = 65.8 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 20/182 (10%), Positives = 37/182 (20%), Gaps = 12/182 (6%) Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 P F T V + + L + A+ RR+ + Sbjct: 85 PDIPFIFVSGTIGEETAVSGMRAGAQDYVMKDNLARLLPAV-ERELAEARVRRERRQTEH 143 Query: 210 KEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYP 261 +R AA SV + + + GY Sbjct: 144 LVRRLSQAVEQAADSVFITDRQGTIQYVNPSFERLTGYSAAEAIGRTPALIKSDRHDDAF 203 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWL 318 F L + + + + +A L + R Sbjct: 204 FHKLWDTILAGRIFQETLVNRRKDGGLFYEEKTIAPLFDEGRGIAGFVSTGRDVTDRIRD 263 Query: 319 NR 320 + Sbjct: 264 EQ 265 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 118/681 (17%), Positives = 223/681 (32%), Gaps = 24/681 (3%) Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 + F + + G+++ + L +G R G L + Sbjct: 399 LRGVISGVFRMDDAIAGALEGARSSGIELCLTDLDAPVGNRRLAGPVGCDSADWARGLPV 458 Query: 131 VTPIGIKCSMYLVGSFFDFP---LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 P I ++ + +V + L +LI + Sbjct: 459 SRSALQFAGRQWSLVQRAGPEYLGAIRSWAAWSSIAIGLVSVGILGAFLLITTGNTRRIA 518 Query: 188 RMIVSPHFAQI----LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT--PYENDFIAG 241 +I R+ A ++ A SW + + + G Sbjct: 519 ALIERRTTELASAGSKLRQQQAALAQAQRVARLGSWETDNELCEVRCSAELHRVLERPEG 578 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 L + ++ + L + Sbjct: 579 RLGTMEELMDAVIPLDRPALLGALEQVARAPDHATLDCRVQARPTRIVQFQIESEWQDGV 638 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFC 353 + V+ + A D LT LPN A L A + + Sbjct: 639 LERIRGTVQDVTSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHILAVL 698 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +DN + ++ G + + ++ + L ++E + +L G E + +L Sbjct: 699 FLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLPRVTRAED 758 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + ++ L F + + LL + Sbjct: 759 AAAVARKMLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGR 818 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 ++ + +++LL N +R A+++ +L L+ QP + G + ++ Sbjct: 819 N-NFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQH 877 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 D G++ P +F+P+ L VL + VN+ L + Sbjct: 878 PDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRRA 937 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++++ +P+ + LEITE +++ + +L G +A+DDFGTGY+ Sbjct: 938 DFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYS 997 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL +KID FVKD+ + DA + + LA+ L VVAE VET Q+ Sbjct: 998 SLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDF 1057 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G LQGYL RP +A Sbjct: 1058 LVARGCHTLQGYLYSRPLDVA 1078 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 137/753 (18%), Positives = 247/753 (32%), Gaps = 49/753 (6%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN 78 L + ++ + L++ W V V+ F Sbjct: 95 VLVAGFGVAAACNLLHGMLLHFDAAHPPLLAGSADISLWLSSWARVAEVITLWF----TA 150 Query: 79 FHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC 138 LS + + A L W + + Q L + I Sbjct: 151 MRLSAPGLGRTWLAVACAITLAIVGLSLGPLPGWFAQVAGSALHQPLALALALALIVAAT 210 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV------- 191 + D P + + + + +L + + + R+I Sbjct: 211 VLQRSARRNDQPRERILAWATMAFACGEITVGALGVHGSVASP-LAHGLRVIAYALLYQA 269 Query: 192 ----SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGY 242 + + E R + V L + L + G Sbjct: 270 VFDAGIRRPFARIQEAESRLRESESRLARVVSAMPDMVFLKDADGVYLSVNPVFERFIGR 329 Query: 243 LVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV----ETEYSLAFIL 295 + R N A+ T L Y + ++ + Sbjct: 330 PEHQIVGRNDFDLTTPAQARQFRQNDQRAMQTRQPLVYEETLTFAEDGYQGRFETIKTPI 389 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQE 347 L +L + R + + A D LT LPN R ++ Sbjct: 390 RDLHGRVTGVLGVCRDITERKRAAQEIERLAFYDALTGLPNRRLLLDRLQRSIATCQRTH 449 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +DN + ++ G M + + L+ ++ + + + G E +++L Sbjct: 450 KLGALLFIDLDNFKDLNDTLGHDMGDQLLAQVATRLVASVRAADTVARFGGDEFVVMLEA 509 Query: 408 P-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + + + + L + + + F + ++ LL + Sbjct: 510 LAPDLRTATAQAEMVADKLLASLNQPFALDGGQHYSTLSIGVTLFGEQRLSVDELLKRAD 569 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGE 517 Q+ A + + + L +R L + +LL+Y QP+ + Sbjct: 570 LALYQAKAAGRNTQ-RFFDPDMQAAVNARSNLEADLRQGLARAELLVYYQPVVDHQARLM 628 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRF 575 G + ++ G++ P F+PL Q L VL++ L G Sbjct: 629 GAEALVRWRHPQRGMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSI 688 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 SVN+ Q +++ K + P+ + LE+TE + E ++ + QL G Sbjct: 689 SVNVSARQFRQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGV 748 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 A+DDFGTGY++ LKRL D IKID FV++++ + DA IVR+I LAK+ L VV Sbjct: 749 GFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVV 808 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET Q + L G + QGYL GRP P+ Sbjct: 809 AEGVETTGQLSFLQLHGCEGFQGYLFGRPVPME 841 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 107/574 (18%), Positives = 213/574 (37%), Gaps = 33/574 (5%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAG 241 R + + L + + L A ++ L + + Sbjct: 122 VRFFLQLSNNKSLLENSLCELKRVKDHNELLLKSTAEGIISLDPMGKINFANPAAKQLLM 181 Query: 242 YLVPVFFII---FTLGVGKLRYPFLNLT---WAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 Y I G L PF + A+S + + Q+F + + + F Sbjct: 182 YNDDTILGIDYAHIQGTDNLTSPFKDCALHHTALSKRIIHDDQQSFHCFDGSSFPVEFTA 241 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + + S S ++ + + + ++ A D LT LPN Sbjct: 242 SPICKTNSESSGIVLVFQDISERKKTEQQLTRLAQYDCLTGLPNRALFTSLLSQAISRSD 301 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 ++ + L +D + ++ G + ++ + + L E + +L G E +++ Sbjct: 302 RRKNKLALLFLDLDRFKQVNDSLGHDVGDLLLQQVAQRLQLATLEGGTVSRLGGDEFMVI 361 Query: 405 LSGPETEGR-LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 L +E + + + + + G+ + + LL + Sbjct: 362 LEEVNSESHKAAKLAQKMITSLDAPFNILGREVLISTSIGIALCSGSTQCIDSLLKRADM 421 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 ++ + Q +K + L N +R AL + + L+ QP + + Sbjct: 422 AMYRAKEQGRN-NFQFYTAELQQQASKSIELENRLRHALQRKEFFLHYQPQVDTNSGQII 480 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPR 574 G + +L +++P++F+P+ + L VL L + Sbjct: 481 GLEALLRWQPDGQALISPEEFIPVAEEAGLIVPIGEWVLREACSQLHRWHRSGLLSPTVK 540 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VNL L ++ + ++ + + P + LEITE + + + + +H G Sbjct: 541 MAVNLSVRQLEHTSLLSTLTQILQETGLKPSQLELEITETAVMKDPDLVVNILHSIHAMG 600 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++++DDFGTGY++ LK L ++KID F+ DI D I+ SI L++ L+V Sbjct: 601 IQLSLDDFGTGYSSLRYLKLLPLHVLKIDRSFINDIGGKQRDQAILESIIYLSRNLDLTV 660 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VAE VETQ+Q L + +QGY I +P+ A Sbjct: 661 VAEGVETQEQLDFLSRFNCHSIQGYYISKPKSAA 694 >UniRef50_C6X941 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X941_METSD Length = 738 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 107/662 (16%), Positives = 220/662 (33%), Gaps = 46/662 (6%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF--PLKISTFFGDADAIFTVVDLL 170 + QR + L + ++ + + G + + Sbjct: 53 GFAALDLVAEQRFDLMLLDLSMPGMTGHEVLMQLPKGKQRIPVVVISGTKTLNAAIDAMR 112 Query: 171 SLFTAVLIYNMLFYYLTRMIV---SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 L L R I ++ + A E L + + Sbjct: 113 HGAYDFLRKPYQPEELLRTIENALEHSRLELQNKSIHARLEESETLYQYLIDSSPDIIYT 172 Query: 228 LLLCTPYEN-----DFIAGYLVPVFFIIFTLGVGKLRYPFLNL----TWAVSTLCLLNYN 278 L + + + GY + N Sbjct: 173 LDDNGNFTFINNRVETLLGYSRETMLGKHYTLLIHEEDYERAHHAFNERRTGNRAAKNVE 232 Query: 279 QNFL---QGVETEYSLAFILAVLISFSVCL-------------LYMVRIYHRSEWLNRRW 322 + E + V+I+ + R + + Sbjct: 233 LRLRCQERRSERRQPEQNYITVVINAMGIYGTHPEHGTPFNGTYGVARDITERKKAEQAI 292 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 QA D LT LPN + + + L +D ++++ G + Sbjct: 293 THQAYHDTLTDLPNRMLFKDRLTVAIHHAKRNKHKLAIMFLDLDRFKWVNDTLGHLYGDE 352 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNT 431 ++ + L M+E + L ++ G E ++L + + R ++ Sbjct: 353 LLKQVAARLRNCMREQDTLARMGGDEFTMLLHELNQPDDATVIAQKIFDELKRPFMLDDR 412 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + + + ++++ L+ + + ++ K++ L Sbjct: 413 EIFISSSIGIAIYPDHGDSIENLIKRADIAMYHVKWRGKN-GFQYYDPSMNSMFHKKLSL 471 Query: 492 LNTIRTALDQGDLLLYAQPIR--NKE-GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 N +R A+++ ++LY QP + G + + + G+++P +F+PL + L Sbjct: 472 ENELRRAIEKRQIVLYYQPKIHLDGHCVIGLEALARWHHPELGLVSPLEFIPLAEETGLI 531 Query: 549 ARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 +LE + ++N+ P + + RI+ + + +S Sbjct: 532 HALGEMLLEEACVQMRQWQDAGLNNFSLAINISPQLVEEDAFVSRILTPIRHHQLSEDLF 591 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 +EITE + ESS+ +++L G +IA+DDFGT Y++ L+R +KID FV Sbjct: 592 EIEITENLLMRDVESSISKLKELGSHGIKIALDDFGTCYSSLAYLRRFPIHSVKIDKSFV 651 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 DI + + +A I+ +I +A L ++AE VET Q L LG +QG+L +P P Sbjct: 652 SDISSTSENASIISAIAGIANGFKLDLIAEGVETIPQMHTLQSLGCTKMQGFLFSKPLPA 711 Query: 728 AD 729 + Sbjct: 712 KE 713 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 110/588 (18%), Positives = 213/588 (36%), Gaps = 30/588 (5%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + + + + + TR I A+ E + + Sbjct: 164 IWLETIKAPMYDMDGRLLGVIGTTRDIARYKAAEEQLFLTSKVF---ENAIEGVMITDSN 220 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 + + + I GY R F NL A+ T + Sbjct: 221 GI---ITEINGAFETITGYSRDEVIGKTPKLLNSGRHERDFFENLWRALKTQGHWHGEIW 277 Query: 281 FLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + T ++ ++ + + + + A DPLT LPN Sbjct: 278 NRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDISLLKQTEAEVAQLAWHDPLTRLPNR 337 Query: 338 RAL----EQAP----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L +Q ++ + + +D + ++ +G + + S+ L L+ Sbjct: 338 SKLTTISQQQIKLAANRKTRLALLLIDVDLFKHINDSFGHLAGDKVLLSLSERLAALLGA 397 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHM---VNILNSRQIHW-NNTGLDMGYGAAWGRFD 445 + L ++ G E ++L+ + + + + + + Sbjct: 398 EDTLARIGGDEF-VLLTQVRRRDDIPVILSAIQRAFDTSFDTSEGESVRLSASIGIAVYP 456 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + LL ++ E ++ + +Q+ L +R A+ L Sbjct: 457 DDGDNPDTLLKNADAAMYRAKQQGRNR-HAFYTEQMTQSSMQQLRLQTALRGAVKNSALS 515 Query: 506 LYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L QP N G + + ++ G+++P +F+P+ L L VL+ + Sbjct: 516 LVYQPKINLRTRKLIGVEALCRWTDHELGVVSPAEFIPVAESIGLMPEIGLWVLKEACRQ 575 Query: 563 LATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 P R +VN+ L N A + R+ + +SP A+ LEITE N Sbjct: 576 ARIWRDQGLNPGRMAVNVSGSQLTGDNFADSVARVLTQTGLSPDALELEITESVVLDNPA 635 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 S++ +++L G +A+DDFGTGY++ L++L + +KID FV+++ T+ I Sbjct: 636 SAIDTMDKLRGMGVSLALDDFGTGYSSLSYLRKLPLNKLKIDQSFVRELPTDQDSGAIAM 695 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I + +A L V+AE VE + Q L +LG QGYL RP ++ Sbjct: 696 AIIAMGEALKLGVIAEGVENETQAEFLLRLGCTEAQGYLFARPLLASE 743 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 117/679 (17%), Positives = 212/679 (31%), Gaps = 56/679 (8%) Query: 94 TFVVLCACAILRWQLGTRWRYGLTSRYVWQRL-FWLGLVTPIGIKCSMYLV-----GSFF 147 + W+ + L G VTP G ++ Sbjct: 294 LAEATLLAHVGYWEWQLPAGVLHWGEQTDRLLGHAPGKVTPSGATFLAHVHPDDRERVAG 353 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS--PHFAQILWRRDIA 205 +F + + +L A ++ + R + R Sbjct: 354 EFAGAVRNQCSYVSEFRLIRADGALRIARANGHLQYDREGRAVRVCGAIQDITELRATET 413 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLC------TPYENDFIAGYLVPVFFIIFTLGVGKLR 259 E+R A +V + + + + G+ ++ Sbjct: 414 ALRNSEERFSIAMTAAPFAVAITRVEDGRFVEVNDKYELHFGWKREELIGKTSVETNLWP 473 Query: 260 YPFLNLTWA---VSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRS 315 P W +L++ + ++ + +L V Sbjct: 474 DPESRQRWLEMLRQHGSVLDFETLGCERNGAVRQVSLSSRYIDIDGEKHVLTFVHDITDR 533 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + R A D LT LPN A + + +D+ + ++ Sbjct: 534 KEAQARIEYLAHHDALTGLPNRVLFRDRFALATAWAERAHAKVALLFVDLDHFKTINDTL 593 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G + ++ + L ++E + + +L G E L+ L+ + + +R Sbjct: 594 GHPVGDGLLQGVALRLRECLRETDTVSRLGGDEFLIALTDIRDPQAINSATAKIFDTLTR 653 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 L + + E LL Q+ E ++ Sbjct: 654 PFELEGHELTNTMSIGIAIWPDDGEDFDTLLKNADTAMYQAKRAGRN-TWRFYTEQMNAN 712 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 +Q+ L + +AL+ + LL+ QP N G + +L ++ PD+F+P Sbjct: 713 AVEQLQLRTALHSALENDEFLLHYQPQINLASGHVVGVEALLRWHWDKRELVPPDRFIPA 772 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L VL +VNL + + ++ ++R Sbjct: 773 AEESGLIVPIGDWVLREACMQAVRWTRQGLPELTIAVNLSAVQFRRGDLERSVVRALSLS 832 Query: 601 HISPQA-----------VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + P V + ES + + +L G R++IDDFGTGY++ Sbjct: 833 GLDPARLELELTESLLLV-----------DTESVIETLRRLKSLGVRLSIDDFGTGYSSL 881 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKR D +KID FV+DI T+ DA IVR+I +A L V+AE VE++ LH Sbjct: 882 AYLKRFAVDKLKIDQSFVRDIATDPDDAAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLH 941 Query: 710 KLGVQYLQGYLIGRPQPLA 728 QGY RP P Sbjct: 942 IFNCDEAQGYHYARPMPGD 960 >UniRef50_Q2BJI5 Regulatory component of sensory transduction system n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJI5_9GAMM Length = 872 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 105/659 (15%), Positives = 231/659 (35%), Gaps = 35/659 (5%) Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 ++ + + + + +L + + P+ + A+ Sbjct: 199 TQFLIFSLAAMLILVGLMLNFTRYLSGRVSFLHAAFTRVSSGYIHDPIDVRGSDELAELA 258 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL-----WRRDIAPSLGKEKRAFTLS 218 + + + + V Q+ +++I L E+ LS Sbjct: 259 VAFNAMQDKIASREKALLKAREELELRVEQRTNQLQEINFQLQQEIDVRLRAEENLRVLS 318 Query: 219 WL---AALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL---NLTW 267 + +S+++ + +G+ V + L L Sbjct: 319 QAVSQSPISIIIAGVDGGVEYVNQAFTDCSGFSVEEIKGNDFTFLNNLDSQPELSKELWD 378 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHL 324 A++ L+ Y ++ + + L + + ++ Sbjct: 379 AINNGQEWRGELANLRKNGQRYWEYTHISPVTDETGQITHYLIIKNDITERKEQEQKIIH 438 Query: 325 QALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT LPN + + +D + ++ G + + Sbjct: 439 QAHFDSLTELPNRSLAMDRLAQGVIKASRNNDVLALMFIDLDGFKNVNDSLGHDIGDQLL 498 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGL 433 + L ++ + + +L G E L+++ G + ++N + + + L Sbjct: 499 IHASKRLSDSVRNTDTVARLGGDEFLIIMEGLVSRRDCLPVLNKIKESFGAPFNIGSNEL 558 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + F + + LL Q+ + + +++ + N Sbjct: 559 KVTPSIGLSLFPDDGQDGDVLLRNADLAMYQAKEAGRN-THHFFNQEMHKNLRRRLEIEN 617 Query: 494 TIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 ++ AL++G+L L QPI + +G + ++ G + PD+F+ + Q L Sbjct: 618 QLKHALEKGELFLLYQPIVEAKTYELKGLEALIRWDNELLGRVMPDEFISVAEQSGLIIP 677 Query: 551 FDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 ++ +L + S+N+ P + +++ I ++Y + +IL Sbjct: 678 IGNWLVNEVLAQMKCWHGSVLEDIAISINVSPRQIQDQSLQPLINDALEKYSFTASKLIL 737 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE N + N+++L G ++A+DDFGTGY++ LK DI+KID FV+D Sbjct: 738 EVTEGLLIRNPLEAKSNLQRLKDLGVQLAMDDFGTGYSSLSNLKNFPFDILKIDRTFVRD 797 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I + D +V + + + L +VAE +ET+ Q +L + +QG+ RP Sbjct: 798 IEKDDDDYALVSAAVSMGRGLGLRIVAEGIETKNQLEILSDMQCDSVQGFYFSRPLSAE 856 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 672 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 95/593 (16%), Positives = 204/593 (34%), Gaps = 37/593 (6%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 V+ + + I Q+ + + L Sbjct: 103 IWVLGRARIIYDEAGNPIRMVGTHTDITEEKELQLKYSQQAQVLEQIHDAVILLD----- 157 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIF--TLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + + ++ + Y L + + + Sbjct: 158 -MDGFIRSWNKGSEILFEYRADEVIGKNFSILFSDNITSAYEKWISELKENGEYKGEMFL 216 Query: 282 LQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNR-------RWHLQALTDPL 331 + F ++L + ++ ++ + QA D L Sbjct: 217 QKKSGEPLYAVFSFSLLKNQNGETTEVVSLIHDITEQKKAEAVLQEQKNILRYQAHHDAL 276 Query: 332 TLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN EQ + + +D + ++ G + +R + + Sbjct: 277 TRLPNRVLFFDRLEQSIRKTARSEKDFALFFIDLDKFKHINDSLGHSIGDRVLRVTAKRI 336 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAA 440 +++ + L +L G E +++ + + + ++ + L + Sbjct: 337 KETIRQEDTLARLSGDEFTVIMEDLGHPEDASVLAEKILLVLQKPMYIDEYTLYISGSIG 396 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + + LL ++ + + ++ +++ + +++ A++ Sbjct: 397 ISLYPQDAMDTESLLKYADTAMYKAKENGRN-TFEFYAPEMTEYALERIAMKTSLKEAIE 455 Query: 501 QGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + +L ++ QP + G + ++ G++ P+ F+ L L D V+ Sbjct: 456 KEELCVHYQPQIDARAECIIGVEALVRWQHPTRGLLHPEAFISLAEDTGLIVDIDKWVMR 515 Query: 558 SLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + +K ++T + ++N+ L N I + P+ + LEI E Q Sbjct: 516 TAMKQVSTWHQEGLVSDV-LALNISIKQLEGHNFMEEIAACLDDFDFKPKWLELEIPEGQ 574 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N ++ +++L G I+IDDFGTGY++ LKRL + +KID F++ I N Sbjct: 575 VMKNHTETIERLKELSVMGIGISIDDFGTGYSSLSLLKRLPINRLKIDKSFIEFIP-NEE 633 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D IV++I LA + L V+AE VET Q+ L + G +QGY RP Sbjct: 634 DVAIVKAIIALANSLKLDVIAEGVETDDQKDFLVENGCTKIQGYYYSRPIASE 686 Score = 60.4 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 13/142 (9%), Positives = 29/142 (20%), Gaps = 25/142 (17%) Query: 228 LLLCTPYENDFIAGYLVPVFFIIF-----TLGVGKLRYPFLNLTWAVSTLC-LLNYNQNF 281 L + GY + +L + + N Sbjct: 36 HTLYISPSWKEMLGYREDELPNAESTWKKLAYPRDIVNVMRSLKKHIREHRKVFENNHRL 95 Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + ++ + ++ + L ++ QA Sbjct: 96 RHKDGHWIWVLGRARIIYDEAGNPIRMVGTHTDITEEKELQLKYSQQA------------ 143 Query: 339 ALEQAPEQEAGKSFCCLRIDNL 360 Q EQ + L +D Sbjct: 144 ---QVLEQ-IHDAVILLDMDGF 161 >UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BB47_9BACI Length = 1106 Score = 672 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 98/584 (16%), Positives = 213/584 (36%), Gaps = 22/584 (3%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + + +L ++R + + + + W Sbjct: 362 VRRLHHQSTLILDGDGCPERAVGISRDVTEQREIEDRLAENTEQFKSFYNNSDVGVWSLD 421 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT----WAVSTLCLLNYN 278 + +L+C+ I GY + + + + +S ++ Sbjct: 422 PAGKKVLICSN-AILAIYGYTKKELYRDPRIWNRSIHPDDVQEVINNQNKISEGNIIRQQ 480 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + ++ L + L+ +V + + A D +T LP Sbjct: 481 YRIITRDGKLKWVSDHLIPIYDEKGRLIRLDGIVADITAQKQAEAQMEFLAYHDYMTGLP 540 Query: 336 NFRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 N R +Q + L +D + ++ G + ++ + +++ Sbjct: 541 NRRLFDQTLNGLFEGKNPEKFAIMYLDLDRFKHINDTLGHPIGDQVLKEAADRITASIRK 600 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDG 446 + ++ G E ++ E+ + + + L + + Sbjct: 601 GDFASRMGGDEFAIIARNVESIEDASRLAAKITGTIQKPYEIEGYELFITASIGISLYPN 660 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 N T + L + + ++ ++ K+ L +R AL + Sbjct: 661 NGSTPEELARNADAALYHAKQMGK-SSHQVYNASMNIESFKKYCLERDMRNALKDDQFYV 719 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 QP + G + +L D GI++P +F+P+ + L V+E+++ + Sbjct: 720 EFQPKIEPRTHKLAGAEALLRWNHPDWGIVSPMEFIPVAEESGLIVEIGDWVIENVIAKM 779 Query: 564 ATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 S+N+ + N+A I L +++ ISP+ + LE+TE ++ Sbjct: 780 EEWQKGGLSLVPISINVSGQRFYKNNLAEMIGDLCQKHGISPKLLELELTESSLIHYSDQ 839 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + +E+L + ++++DDFGTG+++ L++ + + +KID F K+I++N DA I S Sbjct: 840 VLQELEKLGQLKIKLSLDDFGTGFSSLTHLRKFRFNTLKIDKSFTKNIISNLEDATITSS 899 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + D+A ++ VVAE VE +Q L K G +QG+L RP Sbjct: 900 LIDMAHGLNMKVVAEGVEEFEQLDFLKKKGCDEIQGFLFSRPVS 943 Score = 60.0 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 11/144 (7%), Positives = 26/144 (18%), Gaps = 13/144 (9%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---CTPYEND--FIAGYLVPVF 247 E+R A + + G F Sbjct: 257 IAKDITELAEKERKLQKAEERLNLAQKTANFGYWDYYFKEDSAYWSEHMYEMFGVSKDEF 316 Query: 248 FIIFT-----LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F + L N ++ + ++ L +++ Sbjct: 317 IPSFDYYKDFIHPEDLAPFLKNYHASLEEKTPADLEYRIIRKDGQVRRLHHQSTLILDGD 376 Query: 303 V---CLLYMVRIYHRSEWLNRRWH 323 + + R + R Sbjct: 377 GCPERAVGISRDVTEQREIEDRLA 400 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 32/142 (22%), Gaps = 8/142 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLV 244 I+ E+ +L +V L L + Y Sbjct: 131 IIGISKDITAEENLKQKLSISEQMYRSLFDNHPDAVYSLDLNGDVTAFNDSLVRLFHYDP 190 Query: 245 PVFFIIFTLGVGKLRYPFLN-LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISF 301 + I F V + + + NYN + ++ + + Sbjct: 191 DMHGISFRQFVAPESMSLVMCMFKLAAKGKPQNYNMTGINRSGEKFDANITNIPIITDNQ 250 Query: 302 SVCLLYMVRIYHRSEWLNRRWH 323 + + + R+ Sbjct: 251 ITGVFGIAKDITELAEKERKLQ 272 Score = 48.8 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 14/178 (7%), Positives = 38/178 (21%), Gaps = 32/178 (17%) Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF--FIIFTLGVGK 257 AP + +L + +L +L G+ F + Sbjct: 22 APLVENIHIYESLFLNTSDLAYILDKEGQILKVNEAAVKATGFSAEEIQKRGFFPFVCKE 81 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRS 315 AV + + L + + + ++ ++ + + Sbjct: 82 DLPKAETSFQAVLQGSTQTHIFRINRRDGGLILLNSVAIPIIQENQTIGIIGISKDITAE 141 Query: 316 EWLNRR--WHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDN----LEFMSRHY 367 E L ++ Q + L ++ + Sbjct: 142 ENLKQKLSISEQMY---------RSLF-----DNHPDAVYSLDLNGDVTAF---NDSL 182 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 672 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 105/584 (17%), Positives = 193/584 (33%), Gaps = 28/584 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 V + F + + I A+ R + Sbjct: 308 WVHLRSTTFHGDDGRPLRSVGTVQDITERRQAEDEMRLAASVFDNSLNAILIADAN---- 363 Query: 225 VLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + I GY + + + + Sbjct: 364 --GRIRKVNRAFTAITGYTAEEAVGDTPRLMKSGLHSPGFYGEMWAELQACGKWDGELMN 421 Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 S+ +A + + + + + +R H A D LT LPN Sbjct: 422 QCKDGRIISVRESIAAVHDPAGAVAYYIGIFHDITEQKASAQRIHQLAYYDVLTGLPNRA 481 Query: 339 ALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L + L +D + ++ G + +R++ + L ++++ Sbjct: 482 LLMDRCQHELARAMRDGKRLAVLFLDLDRFKHINDSLGHPVGDGLLRAVAQRLQGTLRDS 541 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E +++L ET ++ + L +G F + Sbjct: 542 DTIARLGGDEFIVLLEHVETSAGVELAARRILDAFRDPFQLEEHRLSVGASVGISLFPDH 601 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L Q+ A E + ++ L +R AL++ L L Sbjct: 602 ASDITSLFKYADLALYQAKAAGRGD-FRFFEPRFNDAAKDRMRLERELRQALERNQLSLQ 660 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + G + +L G ++P F+P+ L VLE + Sbjct: 661 YQPVFALPDGRLAGAEALLRWTHPALGSVSPATFIPIAEDSGLIVPIGAWVLEQACRQAR 720 Query: 565 THPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 P +VNL + + + ++ + + R + + LEI+E +AES Sbjct: 721 QWLDAGLDPGVIAVNLSGMQIQRNDLVDTVSSVLARTGLPACHLELEISESYITRHAESD 780 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + QL G +AIDDFGTG + L+RL +KID F+ DI + A + R+I Sbjct: 781 LQRLGQLRALGVSMAIDDFGTGQTSLGHLRRLPVSKLKIDRSFMADIEHDAAAAAVTRAI 840 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 L L+VVAE VE+ Q++ L +QG+ RP Sbjct: 841 IGLGHGLGLTVVAEGVESAAQESALVAQHCDLVQGFRYARPLDA 884 Score = 42.6 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 12/186 (6%), Positives = 34/186 (18%), Gaps = 16/186 (8%) Query: 154 STFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR 213 + + +L + +L + + + A +R Sbjct: 22 EAAALRLEIEALRLANAALESQLLAGSEQAESMFVQLERQRNALRDAHGREQALSAFAQR 81 Query: 214 AFTLSWLAALSV-LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN-------- 264 +++ L + +P + L + Sbjct: 82 VMDTVGGVVIALDPQGRLRQRNRHCQNDLAPLPEGSSVDLLLHPQDLAALEAALPHLPWQ 141 Query: 265 ----LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEW 317 L V F + A+L + + + Sbjct: 142 VHSVLFETVRRQGGYRAEHQFAMRDGSYRYHLVEAAMLYSAQNKEEGAVLSGTDISELKR 201 Query: 318 LNRRWH 323 + Sbjct: 202 QEQHLR 207 >UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYF3_METFK Length = 747 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 126/741 (17%), Positives = 250/741 (33%), Gaps = 49/741 (6%) Query: 24 LIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFC----TNLWNF 79 ++ ++ + A+++ + ++ A + + +F W + + Sbjct: 1 MLGVAVGMLVSAVVNVAILYQAQLVTLQHVLPALLFAWLVNALGVLLLLPLLLNITWAEI 60 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 + + A V AI + +Y + V + + + I Sbjct: 61 RSFWQRRARFSLLALLAVTVEWAIFQLVPDYADQYMWFAFLVLPLVVLISMRMGITGVSM 120 Query: 140 MYLVGSFFDFPLKISTFFGDAD-AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 + L S + D A + V L + A L + Q Sbjct: 121 VVLALSIVALMSAQVDYQAGLDHAGYQPVWALWVLMATLSIVGMLIAAL---------QS 171 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTL 253 E + + A ++ + + + + GY + Sbjct: 172 SREVTERALRHSETKFRAVIENAQDGIVSIDEDGRLVEFNHAAEVMFGYRREDVLGKMLV 231 Query: 254 G--------VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 R L VS + + L+ TE+ + + L + L Sbjct: 232 DILIPLSLRDAHRRGHERYLASGVSKMLDRRLELSALRADGTEFPVEVTITSLKEQGLPL 291 Query: 306 L-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 L R + A D LT LPN R L + + Sbjct: 292 LTGFFRDLTERRKVESEIRNLAFYDALTTLPNRRLLLDRLQQAIAASVRHGRHGAVLFID 351 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETE 411 +DN + ++ G + + + R L ++ + + +L G E ++VL + Sbjct: 352 LDNFKALNDSRGHDIGDLLLVEVARRLRQCVRNEDTVARLGGDEFVIVLEDLSLNLEQAI 411 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + F+GN +++ LL + ++ A Sbjct: 412 AQTRQVAQKVLEIINHPYQLGEIEHHNSSSIGIVLFNGNFVSMEELLKRSDTAMYEAKAA 471 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARL 526 L + + ++V + +R A+ Q L L+ Q + + G + +L Sbjct: 472 GRN-TLRFFDPAMQAALERRVDMELQLRLAIVQKQLRLFCQVQVDAERKVFGAEILLRWQ 530 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKG-PRFSVNLMPLTL 584 D G++ P +F+ + L VL + L + +VN+ Sbjct: 531 HPDHGLLAPKEFVGIAEDSGLIVSIGHWVLYNACLQLKDWEARPGFDSLQLAVNVSARQF 590 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + ++ + P + LE+TE N ++ + L + G R ++DDFGT Sbjct: 591 RHADFVDEVRKILQSTGADPSLLKLELTESVVLDNIADAVAKMNALRELGVRFSMDDFGT 650 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL +KID FV++I + DA +V++I ++ L V+AE VET+ Q Sbjct: 651 GYSSLAYLKRLPLSQVKIDRSFVREIAEDASDAAMVQAILAMSNTLGLKVIAEGVETEVQ 710 Query: 705 QALLHKLGVQYLQGYLIGRPQ 725 LL G ++ QGYL +P Sbjct: 711 FELLQSYGCRFFQGYLFAKPM 731 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 99/430 (23%), Positives = 177/430 (41%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + + QA D LT LPN S L +D + ++ Sbjct: 436 QRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTIND 495 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + ++++ L ++E + + + G E ++L + + S Sbjct: 496 TLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSAL 555 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + H N L + +D + + L+ Q+ +S Sbjct: 556 EQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRN-TYQFFCSGLS 614 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 +++ L ++R AL++ + LLY QP N + G + +L + G++ P F+ Sbjct: 615 NGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFM 674 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + L VL + T +VNL Q ++ G I R+ Sbjct: 675 SVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPDLTGMIARILD 734 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + PQ + LEITE A + E + +++L G +I++DDFGTGY++ L++ + Sbjct: 735 ETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLN 794 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+ N+ DA IV ++ LA+ +L+VVAE VE +Q L L + QG Sbjct: 795 TLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQG 854 Query: 719 YLIGRPQPLA 728 Y+ RP Sbjct: 855 YIFNRPLEAD 864 >UniRef50_Q2BRN8 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRN8_9GAMM Length = 690 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 105/615 (17%), Positives = 205/615 (33%), Gaps = 45/615 (7%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 D LK + + L + R+ ++ + ++ Sbjct: 53 PHIDSLLKGEGDAYATHLVIDLAGEHLLLRSEFTLVDKGTANPRLFITLRNSSKSAQQAR 112 Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVG 256 K +V++ + I G+ + F Sbjct: 113 E-----LKVFRNAVENTGSAVVITDPKGQIEYANQRFTEITGWNLEEIKGKRPNFLRSEK 167 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYH 313 + L V + + Y ++ + + + Sbjct: 168 TTLETYKELWGTVLNHQQWRGTLLNKRKNGSTYWSLQNISPIHDELGNIINFVSVSEDIS 227 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLR------ID--------N 359 + + + + A DPLT L N R+ + +Q L ++ + Sbjct: 228 QIKEHDAQMEKMAYYDPLTNLGNRRSFRRTLDQ-------YLDSPQEQGLNALLLLDLDH 280 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + +I L ++ +++L G E ++ + N Sbjct: 281 FKQINDTMGHEAGDALLTTIASRLNFCTRQRTSVFRLGGDEFTIIFRNCNDRTHVIERTN 340 Query: 420 I---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L ++ IH + + + LL + Sbjct: 341 EVLSLLAQPIHIGPHEISITVSIGITLIGLDSPDASDLLRNADLAMYYAKKSGRN-TFAF 399 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 E+ + + + + + + +R+ALD L L QP N + + +L G + Sbjct: 400 YEQHMDEEAQRTLSIEHDLRSALDGNQLRLVYQPQISADNGKITAIEALLRWDHPLDGPI 459 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGR 592 PD+F+P + L V+ K + VNL + Sbjct: 460 PPDEFIPHAEETGLIIPIGRWVMAEACKAAKAIQDLGLPPIKVCVNLSTRQFDDPALISH 519 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + + P+ + LEITE + +++ + + + G +AIDDFGTGY++ L Sbjct: 520 IEEAIETSGLDPRWLELEITESMLMRDMSTAIDILNSIKQKGISLAIDDFGTGYSSLSYL 579 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K++ D++KID F++DI ++ + I +I + K LSVVAE VE Q Q A L++ Sbjct: 580 KKMPVDLLKIDRSFLQDIPSDRDNMAITSTIIAMTKQLGLSVVAEGVENQAQMAFLNRNQ 639 Query: 713 VQYLQGYLIGRPQPL 727 +QGYLI +P L Sbjct: 640 CTLMQGYLISQPVSL 654 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 88/433 (20%), Positives = 180/433 (41%), Gaps = 16/433 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + + AL DPLT LPN + + + + +DN + + Sbjct: 465 INERKQAEYQLKHLALHDPLTGLPNRLLFQDRLEQAIALSDRHQHKFAVFFMDLDNFKII 524 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + G ++ + L ++ + + +L G E +++ T L Sbjct: 525 NDTMGHDAGDELLKQVSLRLSCTGRKTDTVARLGGDEFAFIITKVNTIEDAVTFAQRLNS 584 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 I N ++MG + + + LL Q+ + Sbjct: 585 LLKTPIEINGNNINMGSSIGITIYPDDAANSEELLRNADIAMYQAKDDGRN-TVRFFTSE 643 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKEG-EGYDEILARLKYDGGIMTPDK 537 ++ + + +L + +L + LY QP+ ++ G + ++ + G++ PD+ Sbjct: 644 MNARLQRNKEVLTDLAESLTKEHFELYYQPLFTIDQNILVGAEALIRWHHPEKGMIPPDQ 703 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+ + + L VL + + + ++N+ P+ +K++ ++ + Sbjct: 704 FIAVAEKSGLINELGDWVLAQACREIKNFLNAGITVFKVAINISPVQFRRKDLLQHMLMI 763 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++ +S + + LEITE N + ++ ++ LH GF++A+DDFGTGY++ LKR Sbjct: 764 LAQHDVSAELIELEITEGAVMDNVDQAIETMQALHDAGFQLAMDDFGTGYSSLSYLKRFP 823 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID F+ D+ + I +I ++ + L V+AE VET++Q L Y+ Sbjct: 824 IQKVKIDRSFISDLENDDDSKSITTAIIQMSHSLGLHVLAEGVETEEQLHYLQAEKCDYV 883 Query: 717 QGYLIGRPQPLAD 729 QGY GRP P ++ Sbjct: 884 QGYYTGRPIPASE 896 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 112/581 (19%), Positives = 203/581 (34%), Gaps = 40/581 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 F L+R I E + + L + Sbjct: 240 QPHFIVLSRDITDRKN-------AEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENA 292 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ----NFLQGVETEYSLAFIL 295 + ++ P W + + Q ++ Sbjct: 293 L-VVEHWGSLLGKRPEDSGVSPDELAVWQENNRRVYEGEVIEAEVEYQVGGQTRIFNNVV 351 Query: 296 AVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------ 347 A + ++ ++ + + H A D LT LPN R + E Sbjct: 352 APIKVDGQTIGIVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSAR 411 Query: 348 --AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + + +DN +F++ +G + + + + L +++ + +L G E +++L Sbjct: 412 RKSHGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVIL 471 Query: 406 SGPETEG----RLQHMVNIL---NSRQIHW------NNTGLDMGYGAAWGRFDGNQETLQ 452 + G + + + + + + FD T + Sbjct: 472 EDIDGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAK 531 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL + Q+ A L + + T + L +R A+D+ L Q Sbjct: 532 ELLRRADTAMYQAKAAGRN-TLRFFDPEMQAAVTHRAALETELRKAIDEQQFHLCFQVQM 590 Query: 513 N--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD- 569 + G + +L G + P F+PL + L VL + + LA Sbjct: 591 DQSGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQP 650 Query: 570 -KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 G +VN+ Q ++ L + + LE+TE + E+ + + Sbjct: 651 ETSGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMA 710 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +L + G R ++DDFGTGY++ LKRL + +KID FV+D++T+ DA I +I L Sbjct: 711 ELKQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGN 770 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET Q L +G + QGYL GRP PL + Sbjct: 771 ILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLE 811 >UniRef50_A6LW88 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Clostridiales RepID=A6LW88_CLOB8 Length = 981 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 103/556 (18%), Positives = 212/556 (38%), Gaps = 31/556 (5%) Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND-----FIAGYLVPVFFIIFTL 253 +++ E++ A S+ L T I GY + + Sbjct: 417 ELQQNEEALRVSEEKYKLALECANDSIWEWNLVTDTFFASDKLIDITGYKLDEINNLRNF 476 Query: 254 GVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL- 306 + L+ + + + + L + ++ Sbjct: 477 VYENVHSDDLDKVKKDFKNHINQLTDVYSSEFRIRTKSSSYVWILSCGKALRNSEGKVIK 536 Query: 307 --YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLR 356 +R + R A D LT LPN ++ S + Sbjct: 537 ITGSIRDISERKISEDRIKFMAFYDSLTKLPNRTLFMNRLNEQLQLSNYANKQGIVFFID 596 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +DN + ++ G + S+ + L++E + + +L G E ++L E +Q Sbjct: 597 LDNFKNINDTMGHEYGDKLLISLAKQFENLIEEKDTISRLGGDEF-ILLHPDSKEDEIQT 655 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 N L + +N + + + + +L ++ Sbjct: 656 YANKLLGLFDKVFKIDNKHMYITASVGIALYPKDGRDSSTILRNADAAMYRAKELGKNR- 714 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDG 530 + + ++ + +RTA+D +L++ QP + + G++ +L + Sbjct: 715 FSLFDPEMYLSLERKTSIERILRTAVDNNELIINYQPQYDLQANKIFGFEALLRLNSREL 774 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNI 589 G ++P +F+P+ + + L VL+ + A SVN+ + L + N Sbjct: 775 GFISPAEFIPIAEECGYITQLTLWVLKESCRQSAKWFEAGYKFNSISVNISSVDLQETNF 834 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + + + ++P + LEITE + +SS+ +++L G RIA+DDFGTGY++ Sbjct: 835 LDNVKEIIESSSVNPNMIELEITETVLMKSFDSSIGILKKLMDMGIRIALDDFGTGYSSL 894 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+R+ + +KID F+ +I +N + I+++I +A + L V+AE VET+ Q +L Sbjct: 895 SYLRRIPINTLKIDKSFIDNISSNKKEEAIIKNIIQMAHSMELKVIAEGVETEGQLLILE 954 Query: 710 KLGVQYLQGYLIGRPQ 725 ++ Y+QGY +P Sbjct: 955 RMKCDYIQGYYFSKPL 970 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 115/614 (18%), Positives = 210/614 (34%), Gaps = 52/614 (8%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 I + + + S + M + R I R ++ Sbjct: 205 IESTALRTKSGRLIPTESSFRLFPVNGKMAIWATFRDITDRK-------RSQEQVKNQKA 257 Query: 213 RAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 + + + ++ Y PVF + + ++L + Sbjct: 258 FYEFILDNLDSDIAV----LNSNFEY--EYTNPVFLSNREIRKWLYKKTDVDLAEKLDLP 311 Query: 273 CLLNYNQN-----FLQGVETEYSLAFILAVLISFSV-----------------CLLYMVR 310 Y + ++ + Sbjct: 312 QEF-YERRKKFLDIAAKNNEIVEFEELIQDQNDKVTYLLRKYIPIDDSETNQKRFISFGV 370 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEF 362 + R A D LT L N Q +F IDN +F Sbjct: 371 DITERKLSEERITYLAYYDALTGLANRTLFIDHANQALKNHKSTETLLAFYFFDIDNFKF 430 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G ++ + L +M E + + + G E ++ + + Sbjct: 431 INDSLGHTKGDILLQMVGARLKRVMTEVDTVARFGGDEFAILKVDVSNKSSAAEFAQKIL 490 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S+ H L + T LL ++ Sbjct: 491 DILSQPFHIMGRDLFTTISMGIALSPNDGVTSAELLKNSDMAMYKAKELGRN-NYKFYTN 549 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 + ++ K++ + N++R A+ +LLL+ QP + + G + ++ + G + P Sbjct: 550 ELILRSEKRLYIENSLRKAIQNEELLLFFQPKISTITNQVCGAEALIRWKHPERGWVPPI 609 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ + R VLE + S+N+ L + N + R+ Sbjct: 610 EFIPVAEDSGIIERIGDWVLEEACRLKKQWSEKNLPSFPLSINVSGKQLARANWSHRVQA 669 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 +Y I+P+ + LE+TE N E S+ E L + G +++IDDFGTGY++ LK++ Sbjct: 670 TILQYGINPEEIELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGYSSLSYLKKI 729 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 AD+IKID FV D+ N D I ++I ++A + L V+AE VE Q+ LLH LG Sbjct: 730 NADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRDLLHDLGCHM 789 Query: 716 LQGYLIGRPQPLAD 729 +QGYL +P P + Sbjct: 790 IQGYLYSKPLPEDE 803 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 113/689 (16%), Positives = 222/689 (32%), Gaps = 41/689 (5%) Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 L +G + +++ L L L + P Sbjct: 9 ARILIVDDALANVGLLLDALEPEF-DVQFATSGTEALFLLEAGAQPDLILLDVAMPDMDG 67 Query: 138 C-----SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + + ++ G+ D F + + A + R Sbjct: 68 FEVCRRLKADGRTRDIPVIFLTAEDGEHDETFGLALGAVDYIAKSSPMAIVKARLRNHAR 127 Query: 193 PHFAQILWRRDIAPSLGKEKRAF---TLSWLAALSVLLL-----LLCTPYENDFIAGYLV 244 + +R+IA ++ + ++ +LL+ ++ + GY Sbjct: 128 LVMQERRLQREIAEHKAAREQLQVAGMVFSASSEGMLLVNADNRIVAVNPAFVALTGYGP 187 Query: 245 PVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + + A+ + EY+ + + Sbjct: 188 EDVVGKDPKLLQSGRHGPAFYQAMWAALEATGTWRGEIWNRRRNGEEYAEHLTINTIYDE 247 Query: 302 SVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + + + + Q+ D LT LPN R L + Sbjct: 248 AGKVHLRVALFSDITEKKASEALIEFQSCYDALTRLPNRRLLAERLALASERAHRDRGRV 307 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL--YQLPGSELLLVLSGP 408 + + +D+ + ++ G + + + ++E+E + +L G E +++ Sbjct: 308 ALLYIDLDHFKEVNDTLGHHQGDALLVQVAHRVRRCVRESETVTVARLGGDEFTVIVPDF 367 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E ++ + + S + + F + LL + Sbjct: 368 EGMDEVERLARAIIDSLSEPFRLGDQLAHVSASIGITVFPDDAADTDGLLRNADQAMYAA 427 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 + + + +V L +R A+ G L L+ QPI + + + Sbjct: 428 KRAGRN-GYQAFNPEMQRAMSMRVRLSQALRDAVQAGQLRLHYQPIVELASGRVRKAEAL 486 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMP 581 L + G ++P F+P+ V E A + S+N+ P Sbjct: 487 LRWEHPEFGEVSPAAFIPIAEDCGSIHCIGDWVFERAACQAARWRSRFGTDFQVSINVSP 546 Query: 582 LTLLQK--NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + GR + + + LEITE ++ + Q G +IA+ Sbjct: 547 RQFQAGGRDF-GRWLERLGELGLDGSMLALEITETLLMDTDQAIADKLAQFRAAGVQIAL 605 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK + D +KID FV+D+ ++ ++ +I +A L V+AE V Sbjct: 606 DDFGTGYSSLAYLKEFRIDYLKIDRTFVRDMTPDSKSFLLSEAIVTMAHRLGLKVIAEGV 665 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET QQ ALL ++G Y QGYL RP P Sbjct: 666 ETPQQYALLERIGCDYFQGYLFSRPLPED 694 >UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR2_9RHOB Length = 1031 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 123/766 (16%), Positives = 245/766 (31%), Gaps = 53/766 (6%) Query: 1 MFVEHNLIKNIKIF---------TLAFTLTVVLIQLSRFI--SPLAIIHSSYIFLAWMPL 49 + V + + + L ++ L+ + + I Sbjct: 223 VLVAAGISVALGVLFGFFAPRKVMYPTILLSLIGGLASALGNAQHLTIEGVAALSLLASA 282 Query: 50 CVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLG 109 + + +F V + + + + A + Sbjct: 283 LSVTAARIVFIRTKTHKVTIYYTSLGIGSL------VGLFGYTLALPSDSVLAGWTFDNF 336 Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 G + +W + L L + I + + + + Sbjct: 337 VLQAVGASLTTLWAFMTGLILFSIFKYSGMFQKADEIDLNDSPIVSTISQMENLIGKLVW 396 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE----------KRAFTLSW 219 + R+ + + D E + T + Sbjct: 397 HDAKLDERLPVRDTDPQERLASLFNSFLDKLQSDEKRRKISETSDSKQQEELSKLATFAE 456 Query: 220 LAALSVLL----LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 A + + +++ + + GY L A+ Sbjct: 457 GAFEGLAISTDGIIVECNHVLYELLGYSAGEMRGSSLLS-HVAPDYREKARAAIQANEPT 515 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 L + ++ L + VR + + R A D LT L Sbjct: 516 PNEVILLSKTGERIPIEVRGRLMEVGDENLRVSAVRDMRKQKEDEARILHLAQHDMLTGL 575 Query: 335 PNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 PN + +Q + L +D + ++ YG + I+++ R L Sbjct: 576 PNRTYFRERFQQAIENQACAEETISAVMVLDLDRFKDINDLYGHPVGDKLIQTVARRLNA 635 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNT-GLDMGYGAAW 441 + ++ + +L G E ++ +T + + N + S+ IH N + Sbjct: 636 CVTHHDTVARLGGDEFAIIQVNLKTTAEVGLLTNKIIEVLSKPIHVGNNITIRTSASIGI 695 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + L+ + ++ E+ + + + +R AL+ Sbjct: 696 ALIPEHGTDPDELMSKADIALYEAKEAGRN-TFAFFEDKMEEAILLRRTMEGDLRNALEN 754 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 +L L+ QP + G++ +L + G++ P+ F+P+ + L VL Sbjct: 755 EELQLHFQPQARSDTRSIVGFEALLRWNHPEKGLIAPNNFIPVAEESGLIIPIGRWVLNE 814 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + P R VNL P+ + + + R ++P+ + LEITE Sbjct: 815 ACAQASQWPERY---RVGVNLSPVQFCDEYLIQEVEGALARSGLTPERLELEITESVLIH 871 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + ++ + QL + G IA+DDFGTGY++ L+R D +KID FV + A Sbjct: 872 DDRRALNTLRQLKELGITIALDDFGTGYSSLSYLRRFPFDRLKIDRSFVSGVTQTPELAA 931 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 I+R++ DL +A + V+AE VET+ + LL +QGYLIGRP Sbjct: 932 IIRAVIDLGQALGMEVIAEGVETEPELELLRNESCDEVQGYLIGRP 977 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 101/655 (15%), Positives = 215/655 (32%), Gaps = 28/655 (4%) Query: 102 AILRWQLGTRWRYGLTSRYV-WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 L Q G G + + R+ + + + + + + IS Sbjct: 477 LSLSTQTGLPGAQGPAATAINENRIVVVDDFLNDPMSLAWHEAAAQYALHGNISLPINAP 536 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 D ++ +L +S QI + K A + Sbjct: 537 DFRGALMVYADTVNFFDHEVILLLKELSEDISFALKQIHINTIKRQQETELKLAEQVFSR 596 Query: 221 AALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTL 272 +A ++++ ++ I GY + F +L ++ Sbjct: 597 SADAMIITNPDNNIVRVNQAFCEITGYTSEEVIGKNPRILKSEKQDHDFFRSLWRSLELQ 656 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTD 329 + Y + + S ++ + + D Sbjct: 657 GSWQGEIWNRRKNGEIYPEWSSINAVKDASGRVVNYFAVFSDL-LQKKALAELDHLKHYD 715 Query: 330 PLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN LE E + L +D+ ++ + + + Sbjct: 716 ALTDLPNRALLEDRIESSITHARQYERFIGVIFLNLDHFHTVNDMLSHAGGDQVLIATAK 775 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYG 438 L+ + +L ++ L T + ++ + + + + + Sbjct: 776 RLMDAAPAQASISRLSADTFVIALPDLNTSEEINRTAELIAQKIYQPLTVADQSVQLSAR 835 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + L+ + + ++ K + + +R A Sbjct: 836 MGISVYPIDGNDATTLMKHADAALADAKQCGVRNSFRFYSSSMNEHAHKLLTMGAELRNA 895 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + Q L+L+ QP + + G + ++ + GI++P +F+ + + L V Sbjct: 896 ISQNRLVLHYQPQVDIITGQIIGAEALIRINHPERGIISPGEFISVAEETGLIIPMGTWV 955 Query: 556 LESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 + + + ++NL PL L Q ++ + ++ + + LE TE Sbjct: 956 IREACRQMQQWHLDKNIELTIAINLSPLQLHQSDLPEIVSLALHDSGLNARYLELEFTES 1015 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 N ++ + + G ++IDDFGTGY++ LK+ D +KID FV +I + Sbjct: 1016 AIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQSFVSNITQDP 1075 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV++I L + ++ +AE VET+ Q L + + +QGYL P P + Sbjct: 1076 NDAAIVQAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLYSAPLPAEE 1130 >UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BNY2_9PROT Length = 744 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 104/577 (18%), Positives = 221/577 (38%), Gaps = 34/577 (5%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + R I + Q+ + + + + + + + + Sbjct: 166 AVRMIGTHRDITNIQEMQLKYSQQVQIIEQIHDSV------ISTDLNGYITSWNKGSQIL 219 Query: 240 AGYLVPVFFIIFTLGV--GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 Y + + T + + ++ ++ ++ L++ Sbjct: 220 LEYTEEEMLTKHVSSLFLEEDHKALQEGTQELIKHGEYHADKRLVKKSGDIIFVSLSLSI 279 Query: 298 LISFSVC---LLYMVRIYHRSEWLNRRW-------HLQALTDPLTLLPNFRALEQAPEQE 347 L L+ + + + + H QA D LT LPN + EQ Sbjct: 280 LKDEKGNPTALVGYCQDITKRKEAEEKLYEQKNILHYQAHHDELTQLPNRTFFNERLEQA 339 Query: 348 AG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +D+ + ++ G + ++ L +++ + L +L G Sbjct: 340 IEKAKRNKTLIALFYIDLDHFKQINDSLGHEVGDIVLKITAERLKNKIRKEDTLSRLGGD 399 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L++ + + + + I+ + L + + + + LL Sbjct: 400 EFTLIIEELNIAKDVSLLAQKIIEDLEKPIYIDTHTLYISSSIGISIYPDDDTDAKNLLK 459 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE- 515 ++ ++ + V + ++R AL + ++Y QP + Sbjct: 460 YADSAMYKAKEEGRN-NFQFYSSEMTELAFEHVAMEASLRQALQNEEFVVYYQPQMDGRT 518 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G + ++ G++ P KF+P+ + L + D V++S + D P Sbjct: 519 DRLVGMEALVRWNHPTLGLVQPYKFIPIAEKNGLIVQIDQWVMKSAMTQFVAWYKDGLNP 578 Query: 574 RF-SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 ++NL L +K+ + L K P+ + LE+TE Q +N + ++ ++Q+ + Sbjct: 579 GVLAMNLAVKQLQKKDFIDTMSNLLKSTQCKPEWIELEVTESQIMTNPQEAIKILKQISE 638 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +A+DDFGTGY++ LKRL D +KID F++D+ + D I +S+ L+K+ +L Sbjct: 639 MGIELAVDDFGTGYSSLSYLKRLPIDKLKIDRTFIQDLPDDEEDVGITKSVIALSKSLNL 698 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET +Q+ L + G Q +QGYL +P + Sbjct: 699 KVIAEGVETDEQKNFLVENGCQNIQGYLYSKPITANE 735 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 10/161 (6%), Positives = 31/161 (19%), Gaps = 21/161 (13%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTP--YENDFIAGYLVPVFFI 249 + L + D +R + + + + G+ Sbjct: 45 RNRELKKIDKKNIEELHERIELALLGSNDGLWDWNITDDSIYFSPRWKEMLGFKDDELPN 104 Query: 250 IFTLGVGK-LRYPFLNLTWAVSTLCLLNYNQ-----NFLQGVETEYSLAFILAVLISFSV 303 + + + + V + + Sbjct: 105 EMPSWQDRVHPEDLQSALDEIEKNINGETDYYENIHRIRHKNGDWIWTLDRGKVQLDENG 164 Query: 304 ---CLLYMVRIYHRSEWLNRRWHLQAL-----TDPL--TLL 334 ++ R + + ++ Q D + T L Sbjct: 165 KAVRMIGTHRDITNIQEMQLKYSQQVQIIEQIHDSVISTDL 205 >UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LR02_DESBD Length = 1158 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 111/581 (19%), Positives = 210/581 (36%), Gaps = 26/581 (4%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--- 229 + + + ++ ++ L + +LLL Sbjct: 564 ISINMRTVKRSDGSISHLEGSVRDVSKRKKAERRLAIQKGLFQQLFDNSPQGILLLGKDG 623 Query: 230 --LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL-NLTWAVSTLCLLNYNQNFLQGVE 286 + + GY +F + + V + ++ Sbjct: 624 APMDINPSFTSLFGYARSDLHALFEMLLHPDSLDESYAFVSTVLSGTSVSTETQRRTKDG 683 Query: 287 TEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 ++ + L ++ + + QAL D LT LPN Sbjct: 684 RIIPVSMLGYPYVLDGTISGAFFIFSDISERKNYEAQLTRQALRDNLTGLPNRVLFMDRL 743 Query: 345 EQEA---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + + +D+ + ++ G H ++ + L ++ + + + Sbjct: 744 NRAMTRQQRNGEYRFAVLMIDLDSFKRVNDTLGHQAGDHLLQEVAARLTHCLRTMDTVAR 803 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 + G E ++L + + L + + + + + + Sbjct: 804 MGGDEFAVLLEDFQNNHEAIGITRRLLDTIRQPLKIQDRDVLVSASVGVVLQTARYTSPN 863 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL +S + + Q + V L N +R AL + + L+ QPI Sbjct: 864 DLLRDADISMYRSKELGKNQ-FKVFSKSMYEQVVQTVQLENDLRQALVEDEFELFFQPIY 922 Query: 513 NK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G++ ++ G + P +F+P+ + L V+ + LA Sbjct: 923 ALSGQKLRGFEALIRWNHPQRGHLPPGEFIPVAEETGLVTEIGKWVMRRGCRVLAGWQSQ 982 Query: 570 --KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 S+NL P LLQ ++ + L + + + LEITE N E + + Sbjct: 983 FPGLDISLSLNLSPKDLLQASLVPVLTELLHETGLDARHLKLEITETAVMDNPEQATSRL 1042 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 E+L K GF+IA+DDFGTGY++ L+RL DI+KID FV+ ++ N + I+++I L Sbjct: 1043 ERLQKMGFQIAMDDFGTGYSSLSYLQRLPIDILKIDRSFVQTMLENPNNLEIIKAIIGLG 1102 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 K L +VAE VET+QQ L +LG QG+L+GRP Sbjct: 1103 KILDLRIVAEGVETRQQLETLQELGCDLAQGFLLGRPMSKE 1143 >UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax=Gammaproteobacteria RepID=Q47Z22_COLP3 Length = 1206 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 107/564 (18%), Positives = 210/564 (37%), Gaps = 30/564 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I + A+ + + + A ++ I G+ Sbjct: 634 DITNRKLAEEKIKLAASVFSHAGEGIIITDDKA------TIIDINDAFTNITGFSREEAI 687 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---S 302 + + ++ A+ + + Y++ ++ + + Sbjct: 688 GKNPRILQSGRQTPEFYADMWQALQNEGYWSGEVWNRRKNGEVYAVMQTISAVRDVHGIA 747 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + + + + A D LT LPN L + + Sbjct: 748 THYVSLGNDITLMKEHQNQLEHIAHFDILTNLPNRVLLADRLSQAMLQCSRHKQSLAVVF 807 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ +G + + ++ + ++EN+ L ++ G E + VL+ T Sbjct: 808 LDLDGFKHVNDTHGHDIGDELLIALSVRMKEALRENDSLARIGGDEFVAVLADLTTVEDC 867 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + ++ L S + ++N L++ + + L+ + Sbjct: 868 EPVLERLLLAASEPVIFDNIVLNISASIGVTLYPQDNVGADLLMRHADQAMYVAKESGKN 927 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKY 528 + Q L IR+ALD +L+ QP N G + ++ Sbjct: 928 R-YHLFDTAQDDAVKVQRESLEAIRSALDNHQFVLHYQPKVNMRKGIVTGVEALIRWQHP 986 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS--VNLMPLTLLQ 586 G++ P +FLP+I +S V+++ L ++ S VN+ L L Q Sbjct: 987 KRGLLNPIEFLPVIENNPMSIEMGEWVIDTALTQISQWQKLGLNFPVSISVNIAALQLQQ 1046 Query: 587 KNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + R++ L + + P + LE+ E A + + + G A+DDFGTG Sbjct: 1047 PDFTDRLMILLAAHPDVEPHYLELEVLETSALEDVYNVSTIMNACMALGVNFALDDFGTG 1106 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L+RL A++IKID FV+D++ ++ D IV + LAK+ V+AE VET + Sbjct: 1107 YSSLTYLRRLPANLIKIDQSFVRDMLHDSDDLAIVEGVIALAKSFKRDVIAEGVETIEHG 1166 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L +LG + QGY I RP P ++ Sbjct: 1167 TALLQLGCELAQGYGIARPMPASE 1190 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 12/156 (7%), Positives = 29/156 (18%), Gaps = 15/156 (9%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS-----VLLLLLCTPYENDFIA 240 L S I + +++ + A L ++ + + Sbjct: 494 LIEQAASLASIAIEKIQANLALKASDEQMQLVLAGADLGFWDWNIVTGRVDRNERWATML 553 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSLAFI 294 GY + W + L + Sbjct: 554 GYTHKELKHSTNQWADFVHQEDREKAWQSINDVLEGRSKSHSLEYRMLTKEGGYRWVHDQ 613 Query: 295 LAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQA 326 V+ + + + + L A Sbjct: 614 ANVMQRHSNGKPLRMSGTHSDITNRKLAEEKIKLAA 649 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 112/623 (17%), Positives = 202/623 (32%), Gaps = 40/623 (6%) Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 + + F V+ L +F A M Sbjct: 878 VARLGAQAYVGLQLRSAEGQPIGFVFVVFREPLQQPGMVISTLRIFAARAAAEMARQASD 937 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 I R I L + + G + Sbjct: 938 AHIRRQASLLDKARDAI--------IVRDLDHRITFWNEGAERLYGWTREEATGQSIAEL 989 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC--- 304 + FL T A + ++ Sbjct: 990 L-------YQDTQEFLRATRATQEQGEWAGEIVQFHRDGRRLDVEGRWTLIQGEQGQPDA 1042 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLR 356 +L + + + R A D LT LPN L G + + Sbjct: 1043 ILAIDTDIGQRKATEREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFID 1102 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----E 411 +DN + ++ G ++ + L ++ + + +L G E ++++ G T Sbjct: 1103 LDNFKTLNDTLGHDQGDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIEGLSTHPGELA 1162 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN-QETLQPLLGQLSWLAEQSCA 467 + + + + F T+ LL Q Q+ Sbjct: 1163 MSARTVGEKILAVLATPYVLQGYHYRSTPSIGVAPFGDGRTSTVGELLKQADLAMYQAKT 1222 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILAR 525 L + + T + L N +RTAL + +L+ QP ++ G + ++ Sbjct: 1223 AGRN-TLRFFDPGMQAVVTARAELENDLRTALAREQFMLHYQPQIDRRGSVTGVEALVRW 1281 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLT 583 G+++P +F+PL + L VL + LA + +VN+ Sbjct: 1282 PHPQRGMVSPGEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQ 1341 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + ++R + LE+TE + E+++ + L G ++DDFG Sbjct: 1342 FHHEAFVEDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFG 1401 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR+ D +KID FV+D++ + DA IV +I L+++ L V+AE VET + Sbjct: 1402 TGYSSLSYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAE 1461 Query: 704 QQALLHKLGVQYLQGYLIGRPQP 726 Q+ L + G + QGY RP P Sbjct: 1462 QRTRLEQAGCRAYQGYFFSRPLP 1484 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 15/279 (5%), Positives = 49/279 (17%), Gaps = 11/279 (3%) Query: 56 LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCAC--AILRWQLGTRWR 113 L + + + + Q + L +L Sbjct: 32 LARLAAHLCGAAVAAIGFMDAGREWFKASAGMELGTLQNLAGDHSLCRLALGGRLVQVED 91 Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKC---SMYLVGSFFDFPLKISTFFGDADAIFTVVDLL 170 + L + + + L + + +V + Sbjct: 92 AQVDPVLRSHPLVQGPSRMRMAACMPIKTTDGLTLGAVVVLDTARRALEESHREALVAIA 151 Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 S A+L + R ++ + + + + Sbjct: 152 SQAMALLELRRQRRDVARRAQERALSEERFHLVARATADAIWDWNLTDDSMW-WNEGMEV 210 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + + ++ F + T Sbjct: 211 LFGVPLHTLPHDSTSWTQRLHPEDSDRVLESIHAAIE--GDALHWMDEYRFRRQDGTYAW 268 Query: 291 LAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQA 326 + V+ ++ + + + A Sbjct: 269 IRDRGFVIRDAQGQGQRMVGGMTDISAQKQSALQAQRDA 307 Score = 48.8 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 12/149 (8%), Positives = 34/149 (22%), Gaps = 12/149 (8%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIA 240 +++ A + R A E + +L + + +L Sbjct: 448 VQILAESLGAVLQLRSYAAQLSASELQYRSLFDAHPQPMWVYERGSLRILAVNRAMVRHY 507 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ---GVETEYSLAFIL-- 295 GY + T + + A + + + + T + Sbjct: 508 GYEEAELLRMTTAQLWPEQERSRQEIEARALPPGVRRDAVHRRHCKKDGTPIDMEVYAGD 567 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + + + + R Sbjct: 568 TTFNGRAARQV-LATDVTQRMRMERELAR 595 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 108/599 (18%), Positives = 214/599 (35%), Gaps = 38/599 (6%) Query: 154 STFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR 213 + TV+ L + + + + I Q Sbjct: 456 HRIVRSDGNVRTVLQLGDVERSASGEPVRMTGTVQDITDLKRTQENLDLA---------- 505 Query: 214 AFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVG---KLRYPFLNL 265 + + +V++ ++ + I G+ V + + + Sbjct: 506 -KYILDTTSDAVIITDVNNRIIDVNHAYTKITGFSRDEVMGQNPQVVHNEEQGEAFYSRI 564 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRW 322 ++ + + Y + + + + + + + Sbjct: 565 WQSLLQEGRWSGEVWERRKNGELYPKWMTMRRMLNQYGETAFFVGVFVDISTQKATEEQM 624 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A DPLT LPN + + L ++ + ++ YG + Sbjct: 625 ERLAYYDPLTKLPNRALFHERLTQSITTAKRYKRHVGVVMLDLNRFKLINESYGYGVGDG 684 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNT 431 + + ++ ++E++ + ++ + L + EG + + N L + N Sbjct: 685 LLIQVAERIVERLRESDIVARIGADTFAITLVDLKQEGEITGVANNLLKQFVMPFLVNGH 744 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 L + + + + + LL + Q+ E +S + K++ L Sbjct: 745 ELMLRTAMGIVLYPTDGQDAETLLRHVENALGQAKQQGVN-NYRFYSEEMSNISNKRLAL 803 Query: 492 LNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 + TAL+Q D +LY QP N + G + ++ G+++P +F+P+ + L Sbjct: 804 EQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFIPVAEETGLI 863 Query: 549 ARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 L +LE+ + +VNL +N+ I I P + Sbjct: 864 VPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNSAIDPSML 923 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 EITE N E S+ + + G +AIDDFGTGY++ LKR + +KID F+ Sbjct: 924 EFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTLKIDQSFI 983 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +D+ ++ DA IV +I +A+ +L VVAE E +Q L + G + +QGY RP P Sbjct: 984 RDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYYFSRPLP 1042 Score = 44.2 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 12/217 (5%), Positives = 39/217 (17%), Gaps = 5/217 (2%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 + + L + + + + + F + L + Sbjct: 164 FAQALRGESGSAIALDLNGEMALMGFTAVPDLGWGVVVHYRLSYQRKPFLRIAWGLLLGS 223 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 L+ + ++ + + R W + Sbjct: 224 ALVVVFGGWLFMQVGGPLISGLERY-QARLGLAMAASRIGIWEWDVVTGKVEWDEGMHQI 282 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFI 294 D G + L G+ +++ + +L+ Sbjct: 283 FDLPKGAFDGTWEGFLALFDGEDSARLEQCRQESLTEQLRFELECRTQPVAGVQKTLSLR 342 Query: 295 L---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 L+ + + Sbjct: 343 GELRMPEHGVEAHLIGACWDISEQKQAELKLLESRHH 379 >UniRef50_C1SL51 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL51_9BACT Length = 1016 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 91/538 (16%), Positives = 191/538 (35%), Gaps = 26/538 (4%) Query: 217 LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVG---KLRYPFLNLTWA 268 + ++++ ++ GY Y + +L Sbjct: 471 VFDNTLDGIMIVKKDGEIVSCNKAFSSTTGYSEEEIIGKNARMFRPGIHPDYFYEDLWKN 530 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + + + + + ++ + + Q Sbjct: 531 LFKYGKWDGEVWQKKKDGEIFPTLMSCSSIRNSEGEITEFISVLHDITEQKRYEEQIKYQ 590 Query: 326 ALTDPLTLLPNFRALEQAPEQEAG-------KSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 A D LT LPN ++ L +D + ++ G + Sbjct: 591 ATHDSLTGLPNRIYFTDKLAEQIPKNHLPSCIGIMFLDLDRFKNLNDTLGHTTGDKVLEI 650 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDM 435 I + + + + G E + +G + + L MV + S +H L + Sbjct: 651 IAERIRNTVHGPDMAARFSGDEFTVFFTGVKNQDALIEMVKNVTKRISEPLHIQGYELFI 710 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 A + N T L+ Q+ + + + + ++ + + Sbjct: 711 QTSAGISVYPDNGLTASELIKNAEIAMYQAKQTGKN-NIQLYTDGLDETIRDRFIMESKL 769 Query: 496 RTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 A++ + L+ QP + G + +L + G + PDKF+PL L Sbjct: 770 NRAIENDEFSLHYQPKIDLATDSVMGMEALLRWHNPELGFIPPDKFIPLSEDSGLILPIG 829 Query: 553 LQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V++ L A + + ++NL ++K + + + + ++ + V EI Sbjct: 830 EWVMKRALSDTAKLHKEGFADLKIAINLSLRQFMKKGLVEFVEKSIETAGLNNRNVEFEI 889 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + + + ++ + AIDDFGTGY++ LK++ +KID ++ I Sbjct: 890 TENIFTEDLSTISRIMNEISNLNIKFAIDDFGTGYSSIGYLKKMPISTLKIDRSYISKID 949 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++T IV S+ ++K+ L+VVAE ET+ Q +L +G +QGY G+P P + Sbjct: 950 SDTDSESIVSSVILMSKSLGLNVVAEGAETESQVNMLKDMGCSIVQGYYYGKPMPYDE 1007 >UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJT7_CYAP7 Length = 812 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 112/588 (19%), Positives = 227/588 (38%), Gaps = 26/588 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++F +LS A F +TR I A++ + + + + +A Sbjct: 213 SLFWASIVLSPVFAQNRQLKGFAKITRDISERKQAEVQKNKLLKDLTDLKLALDQSAIVA 272 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + ++ + I+GY + F L +S + Sbjct: 273 VTNSQGIITAVNDQFCQISGYSKEELIGKTHRIINSGYHSKKFFQQLWATISQGKIWRGE 332 Query: 279 QNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 Y +A + ++ + + + + +R + L D LT LP Sbjct: 333 ICNRSKTGQFYWVATTIVPFLNQNNQPFQYFAIRFDITQRKLAEKRLRHEVLHDSLTGLP 392 Query: 336 NFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N L Q EQ + + +D + ++ + G + + +I L Sbjct: 393 NRTLLIQRLEQVRHRAKRKANYCFALLFIDLDRFKNINDNLGHPIGDRVLITIASRLQEC 452 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGR 443 ++ + + +L G E +++L E E + ++ + + + L + Sbjct: 453 VRSLDTVARLGGDEFIILLDELEEEKEIFKIIERIEKQLTTPMVIEGQTLSLTASIGIA- 511 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F+ + LL + + + Q L N ++ A+++ + Sbjct: 512 FNDTNLSNSDLLRNADLAMYRVKNEGKA-GYAIYQSEMYAQAQALWELENHLKLAIERQE 570 Query: 504 LLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LLY QPI + + G++ ++ G+++P F+P+ + +L VL+ Sbjct: 571 FLLYYQPILSLKTLTVIGFEALIRWQHPQRGLISPVHFIPVAEETDLIVAIGEWVLQQSC 630 Query: 561 KWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + L+ +VNL L + N ++ + ++ + + LEITE Sbjct: 631 QQLSAWREKYPQANHLTINVNLSNRQLEKDNFVYKLDNVLQQTGLPATQLKLEITETLLM 690 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 +N +++ + QL + I+IDDFGTGY++ L RL +KID FV ++ ++ + Sbjct: 691 TNLAAAIATLSQLKQRNINISIDDFGTGYSSLNYLCRLPVSSLKIDRSFVANVHEDSKNL 750 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I+++I L + + V+AE +ETQ+ L +LG QY QGYL +P Sbjct: 751 QIIQTILSLGEQLMIEVIAEGIETQKHLEQLQELGCQYGQGYLFSKPV 798 Score = 73.1 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 22/238 (9%), Positives = 50/238 (21%), Gaps = 21/238 (8%) Query: 105 RWQLGTRWRYGLTSRYVWQRLFW----LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 L RY+ L + I + Y IS + G+ Sbjct: 13 YSLAIICPLLALGVRYLLNWALGNNAPLLIFIIPVIITAWYGGLLPGILSTVISAYLGNY 72 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW----RRDIAPSLGKEKRAFT 216 I L + ++F + + + E+R Sbjct: 73 FFIHPTEQFKILSLPETVRIIIFLSEGIFLSIFFEYYKRLNTKTSQIVESLRESEERYRL 132 Query: 217 LSWLAAL-SVLLLLLCT-----PYENDFIAGYLVPVFFIIFTL----GVGKLRYPFLNLT 266 L + +L + I GY + Sbjct: 133 LVEGIEDYGIFMLDGQGRIISWNLGAERIQGYQSTEIIGRHYSIFFTTTDTSAKVPEKIL 192 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRR 321 + + + + +L+ + + + L + R + + Sbjct: 193 QTALKQGRFKGEGWRRRKDGSLFWASIVLSPVFAQNRQLKGFAKITRDISERKQAEVQ 250 >UniRef50_B4W5F5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W5F5_9CYAN Length = 776 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 100/596 (16%), Positives = 192/596 (32%), Gaps = 62/596 (10%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVF 247 ++ E + ++ A + + + GY P Sbjct: 171 VARDITERKQAEQALKQAEAKYRSIFENALEGIFQSTADGHYISANPALARLYGYSSPDE 230 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTL-----CLLNYNQNFLQGVETEYSLAFILAVLISFS 302 ++ + Y S L + ++ + + +A + Sbjct: 231 LMVRLTDIEHQLYVDPQRRAEFSRLLQENDAVADFESQVYRKDGSVIWIAENARAVRDMM 290 Query: 303 VC----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AG 349 V + + +A D LT LPN Sbjct: 291 TGELLYYEGTVEDITEHKLAKDQLQTRAFYDTLTGLPNRALFMDRLSHTVERAKRHPTYR 350 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G ++ + I R L ++ + + +L G E ++L E Sbjct: 351 FALLFLDLDRFKVVNDSLGHLVGDQLLIGIARRLESCLRTEDTVARLGGDEFTILLEDIE 410 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDG--------NQETLQPLLGQL 458 + + + + + + G N + + LL Sbjct: 411 DIHHATRVAERIQQELAAPFNLDGHEVFTGASVGIVLSREIRKEGDITNYDCPEDLLRDA 470 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---E 515 ++ A + + + + L +R A++ + +Y QPI + + Sbjct: 471 DTALYRAKALGRSR-YEIFDLTMHQNALSVLQLETELRRAVENQEFEIYYQPIVSLSTHQ 529 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--------- 566 G++ +L G++ P +F+P+ + L +L + L Sbjct: 530 IAGFEALLRWHHPSRGLVYPGEFIPMAEETGLIIPMGWWMLRQACRQLELWHDTVQESEL 589 Query: 567 -PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 VNL LQ + + ++ H+ P + LEITE ++ E + Sbjct: 590 NQELAHQLTIYVNLSSKQFLQPELLEHLDKILHETHLHPSHLKLEITESCLLADPEIAEE 649 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA-------- 677 +++L + IDDFGTGY++ L R D IKID + +I + Sbjct: 650 RLKELRDRQIGLCIDDFGTGYSSLSYLHRFPIDTIKIDQSLISNISIDVQGHCEAGMINR 709 Query: 678 ------MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 IVR+I LA + + V+AE VET++Q L L Y QGYL P Sbjct: 710 TKGLPLQIVRTIIMLADSLGMKVIAEGVETKEQLTQLRLLDCDYAQGYLFQAPLDA 765 Score = 58.1 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/191 (9%), Positives = 44/191 (23%), Gaps = 22/191 (11%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + L + L + + I ++ E L S+ Sbjct: 22 LAVLTFFRFESRQTDRRLVNLISTVAAQLGVAIERKQAEVALRSSEAELRALFAAMTDSI 81 Query: 226 LLLLLCT--------PYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 +L + + + + + A++T L Sbjct: 82 FVLDSQGCFLKIAPTNPDPRLLPENANEFVGKTLHQFFAPTQADQFLTYIQEAIATSSRL 141 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ-ALTDPLTLL 334 N + E A ++ + S ++++ R + + A Sbjct: 142 NIEYSLTVRD-REVWFAATISPTLEDS--VVWVARDITERKQAEQALKQAEAKY------ 192 Query: 335 PNFRALEQAPE 345 E A E Sbjct: 193 --RSIFENALE 201 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 102/563 (18%), Positives = 203/563 (36%), Gaps = 31/563 (5%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE-----NDFIAGYLVPVFFII 250 R + L + L++ L+ + + GY Sbjct: 687 DITQRRAMQQALDRQMALFGQLFEDSPLAIALVDTVGRIAQVNGGFETLFGYKRAEILGK 746 Query: 251 FTLGVGKLRYPFLNL---TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCL 305 + + + + + + + Sbjct: 747 DNRLFIVPEEQLSEINSIRQRILDGETVQRETLRRTSRGDIVPVNLLGHPVRIGGEITNI 806 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLR 356 ++ + + R+ QA D LT LPN + + + + Sbjct: 807 FWIYQDISERKEFERQITHQAFHDSLTGLPNRSLFRERLGRAVERTKRRPDYHFAAMLID 866 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 ++ ++++ G + I L ++ + + +L G E ++L T + Sbjct: 867 LNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGDEFAILLEEFRTNKEVIS 926 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + WN + G + + +L ++ Sbjct: 927 VASRIQNEVRRAFLWNGKEIVSGASVGIVLQTRDCAGAEDILRDADIAMYKAKERGRGHL 986 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + + + + + + N +R A++ L L+ QPI + + EG++ ++ + Sbjct: 987 V--FHNRMRQEVLEVINMENELRRAIEGNSLELHYQPIFDVDGGKLEGFEALVRWRHPEH 1044 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK----KGPRFSVNLMPLTLLQ 586 G++ PD+F+PL + L V+ + + L + + G SVNL Q Sbjct: 1045 GMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLTMSVNLSCKQFAQ 1104 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + I+R + I+P + LEITE + ++ + +L + G +A+DDFGTGY Sbjct: 1105 HTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLKEIGVLLAVDDFGTGY 1164 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L++ DI+KID F+ T +A IVRSI D+A + L V AE VETQ+Q Sbjct: 1165 SSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRVTAEGVETQEQLE 1224 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L + QGY+ +P D Sbjct: 1225 RLQSINCDRAQGYMFSKPMAPGD 1247 Score = 73.1 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 29/327 (8%), Positives = 73/327 (22%), Gaps = 27/327 (8%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFH 80 ++ +R +++ L + F + ++ G C Sbjct: 248 MLLGWMATRTPKITYLVNGVLGGLVAVTASCHAVSNF---DAVCIGLVAGAVCLGCELLL 304 Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFW--LGLVTPIGIKC 138 + + + IL L T + +L+ LG+ G+ Sbjct: 305 VRLRIDDAVGAVPVHLGCGIWGILAVALFGDPAVLQTGLSMTGQLWVQCLGIFAAFGVAF 364 Query: 139 SMYLVGSFFDFPLKISTFFGD-------ADAIFTVVDLLSLFTAVLIYNMLFYYLTRM-- 189 + V F PL + D+ LF + + R Sbjct: 365 VVPFVVLRFIDPLFPLRVAPEDEDTGLNVSEHGAHTDIHDLFEILDRQAATRDFSLRAPE 424 Query: 190 --IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAG 241 + + + + AA ++++ ++ FI G Sbjct: 425 EPFTEVGHIAHRYNHVLDALHDAVSKTEAIVKSAADAIIVFTTDTLRIISANPGASFIFG 484 Query: 242 YLVPVF----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + G + + + ++ +L ++ Sbjct: 485 HPALRLEGMTIPELLPAWGIPGSGDNEASLLHAMRSSNQVEVTGRRANGSQVTLEAVITQ 544 Query: 298 LISFSV-CLLYMVRIYHRSEWLNRRWH 323 + R + Sbjct: 545 SSGRQGDFFIGTFRDISERKRYENELR 571 Score = 68.8 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 16/228 (7%), Positives = 46/228 (20%), Gaps = 34/228 (14%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 G V + + F R I + R+ Sbjct: 513 SLLHAMRSSNQVEVTGRRANGSQVTLEAVITQSSGRQGDFFIGTFRDISERKRYENELRK 572 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 E+ + A + L I G+ P + + + Sbjct: 573 A-------EENFRGIFENAVEGMFRTTPHGRYLQANPALAKIYGFESPAELMRHYDDISR 625 Query: 258 -----LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMV 309 + + ++ + + ++ + + ++ V Sbjct: 626 QLYVEAGRREEFIRLLGEKEEIFDFESAIRRKDGSVIWISENARAVKDAAGNVVCYEGTV 685 Query: 310 RIYHRSEWLNRRW-HLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLR 356 + + + AL + E + + + Sbjct: 686 MDITQRRAMQQALDRQMALF----G----QLFED-----SPLAIALVD 720 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 108/621 (17%), Positives = 223/621 (35%), Gaps = 29/621 (4%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + D + + + + L V+I ++ + + R + Sbjct: 328 VALAQLTQSRLDDLGSQAERWLHETLDSIKQGAYVVLGLFVVIGAVISWLVRRQVRQMFL 387 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF--IIFTL 253 Q + + + ++ + DF+ Y+V + Sbjct: 388 LQRDKELILNAAGDGIVGVDRTGRASFVNPAAARMLGYDAEDFLRRYVVETIPVVLANGE 447 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVR 310 V + +P LC+ + F + T S+ ++ LI + + + + Sbjct: 448 HVMEQDHPISQTRQLEQGLCVRSDLDAFRRRDGTIISVEYVATPLIGSAGQHEGAVLIFK 507 Query: 311 IYHRSEWLNRRWH-------LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 R + R + D LT LPN R + + S + Sbjct: 508 DLTRQQQAEERLEEKKQLLDHMSNHDSLTGLPNRRLFQDRLYHAIERARRSSSEMSVLFI 567 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + S+ R + ++ ++ L +L G E +++L Sbjct: 568 DLDRFKKINDSLGHELGDKLLISVARRMQSHLRRSDTLARLGGDEFVVILEESSHSHFAA 627 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L S + L + R+ + E + L+ + + Sbjct: 628 VIARNLLNELSEAFDVESHRLFVTASIGISRYPYDAEDVVGLMSSADAAMYHAKSRGRN- 686 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYD 529 ++G+ + + +R AL +Y QP + G + +L + Sbjct: 687 NFQFYAPEMNGRAQDFLEMETQLRDALALEQFEVYYQPQYDMRDQTLVGAEALLRWNHPE 746 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G++ P F+ L + VL + + + R +VN+ N Sbjct: 747 RGMVPPGDFIALAEETGAIVPIGEWVLMQVCRQNRQWMDEGLTPVRVAVNISIAQFRS-N 805 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++ + ++ ++ + + + LEITE + E ++ + +L + G I+IDDFGTGY++ Sbjct: 806 LSQTLEQVLEQSGMPAELLELEITESMLMEDEEETITLLNELKEKGLHISIDDFGTGYSS 865 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L++L D +KID F+ +V N DA I SI L + L ++AE VE ++Q+ L Sbjct: 866 LSYLRKLPVDKLKIDRSFIAHVVHNQSDAAITGSIIALGQNMDLRILAEGVEHEEQRDFL 925 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + QG+L RP D Sbjct: 926 LQHRCYIAQGFLYARPMTAED 946 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 99/662 (14%), Positives = 227/662 (34%), Gaps = 26/662 (3%) Query: 86 TAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGS 145 + V+ + +L ++GL+ ++ R L + + ++G+ Sbjct: 187 VFSSIPDGILVLSRSLTVLSANRAFLKQFGLSVDAIFGRPLEQVLQASGLKEQILEVIGT 246 Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 + + + + + + M++ R A Sbjct: 247 GDMRHDLLLSVGIAGEETQRPMRITLAGMRLAEEEEEEEEEEAMVLVIVEDLTEEERLRA 306 Query: 206 PSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + ++R L+ A + + ++ + + G + Sbjct: 307 LAEASDRRFRELAETAYSGIVLVDSAMRIVYFNSAAEKMFGCNRTHVLERPLDILLPEAG 366 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLN 319 + + + T++ + +V S + ++R + Sbjct: 367 TLFPDPLKDGESRIW--DSVGQRFDHTQFPMEISSSVFSEPSGSFVTLVLRDLTERKTFE 424 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + A D LT LPN L + + L +D + ++ G Sbjct: 425 NQLLYLANYDALTGLPNRIHLIERLKQAIPLAERNGQHLALLFLDLDRFKGVNDSLGHAS 484 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 + + + L +++ + + + G E + +L G E + + + + Sbjct: 485 GDLLLVEVSKRLSNCVRKGDTVARFGGDEFVFLLEGLEEREDAKPIAEKILGALNAPFEI 544 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 +N + M + + E+ LL + ++ + + ++ Sbjct: 545 DNVQVFMNGSIGISTWPHDGESSDLLLRRADAAMYRAKELG--NSYAFYNPEIGALPERR 602 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + +R AL++ + L+ QP + G + ++ + G++ PD+F+P+ Sbjct: 603 FSMERELRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQFIPVAEST 662 Query: 546 NLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L V+ S L + R +VN+ + + + + + Sbjct: 663 GLIVPMGAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTLESSMRESGVDS 722 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + +E+TE + + + +L + G I+IDDFGTGY++ LK+L +KID Sbjct: 723 RLLEIEVTESVLMQHP-MASDTLRELSRMGILISIDDFGTGYSSLSYLKKLPVYKLKIDR 781 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV + + I +I + A L +AE VE+++Q +L +LG +QGY RP Sbjct: 782 SFVTTLPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGCDEIQGYYYSRP 841 Query: 725 QP 726 P Sbjct: 842 LP 843 >UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5V4_NITSB Length = 793 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 97/560 (17%), Positives = 215/560 (38%), Gaps = 29/560 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFII- 250 ++ + + + +VL+ ++ + ++GY Sbjct: 228 INRLIEAQKQAIERATVMKNVIQNSDDAVLITDHAKNIVDCNRAFEKMSGYTKEEIIGKK 287 Query: 251 ---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS----FSV 303 F + + + + + + + + + + Sbjct: 288 PEEFLKSGLQDSSFYQKMWKNILKKGEWSGEIVDKRKDGSLFYALQSIFAIKDPLTNKIT 347 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + A DPLT L N + Q + + + Sbjct: 348 HYAAITKDITELAKKQETIQKLAFYDPLTKLANRVSFLQTLDEFIALGKRESFPFALLFI 407 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +DN + ++ G +++ + L L++E + +L G E +++ G + + Sbjct: 408 DLDNFKEINDTLGHDTGDKLLQAFVKRLKSLLREEDIAARLGGDEFVVLAPGISSPSKAL 467 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L + + ++ + + F + + LL ++ Sbjct: 468 ELACRLQNAFQQPLMVDDRPITVQMSIGIALFPQDAKNANELLKAADIAMYKAKEK-KNR 526 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYD 529 + +E + + ++V L ++ A+++ +L+LY QP + EG++ ++ Sbjct: 527 CV-LFQENMQQEALEKVTLKQELKKAIEKNELMLYLQPKISVRTKKVEGFEALIRWNHPT 585 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G + P KF+PL + L + + + + L + ++N+ + Sbjct: 586 RGFIPPSKFIPLAEESALIIPLTEWIFQEVDRLLDQLQQNGIESPIAINISARHFATDKL 645 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +I K+ +I + LE+TE + +M+ +++LH FG ++A+DDFGTG+++ Sbjct: 646 IEQITTNIKKEYIQKGLIELEVTESAVMEDINKAMHYLQKLHSFGIKVALDDFGTGHSSL 705 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 + LK+L D IKID F+ I+ + D IV S ++A + VAE VET++Q L Sbjct: 706 QYLKKLPIDTIKIDKTFIDHIINDNKDQAIVESTIEMADKLGMDTVAEGVETKEQAQFLE 765 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 K+G+ Y+QGY +P P + Sbjct: 766 KIGIDYIQGYYYAKPMPFEE 785 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 122/649 (18%), Positives = 223/649 (34%), Gaps = 35/649 (5%) Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 G ++ V +R L S P +I A Sbjct: 96 LTGADLLGEARAKLVGRRFERYIAPVDRDRWHRHALSLSRRGEPGRIELLVQGAGGRSIH 155 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 L L L I A+ R +E T + Sbjct: 156 AQLDGLMARANHDAPLLRIALTDISERKHAESELRLAATAFEAQEGMMITDAHGVIE--- 212 Query: 227 LLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + GY + + ++ + Sbjct: 213 ----RVNKAFTQMTGYSAAEAIGQTARLLHSGRHDPAFYAAMWDSLQRTGTWQGEVWNRR 268 Query: 284 GVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y+ + + + + + + A DPLT LPN R L Sbjct: 269 KCGEVYAEWLTITAVQDEHRTVTRYVGTMLDISQRKAREEEIAQLAFYDPLTGLPNRRLL 328 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + + +D+ + ++ G ++++ + L ++E + Sbjct: 329 KDRLNQAMAISARSQREGALLFIDLDHFKDINDTRGHDKGDLLLQNVAQRLSGCVREGDT 388 Query: 393 LYQLPGSELLLVL-SGPETEGR-----LQHMVNILNSR---QIHWNNTGLDMGYGAAWGR 443 + ++ G E +++L + T + + + + + + Sbjct: 389 VARIGGDEFVVMLGADLSTATDEAASHARSVAEKILAALNLPYLMSGEFVHCSASLGVAL 448 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F+ + +T+ LL + Q+ A L + V + L +R A+ + + Sbjct: 449 FNDHHDTVDELLKRADQAMYQAKAGGRN-TLRFFDTAVQQTMMLRAALEAELRLAVQRDE 507 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L+L QP+ + G + ++ G+++P +F+P+ L VLE+ Sbjct: 508 LVLCYQPVIDHQNRLLGAEALVRWKHPRRGLVSPAEFIPIAEDRGLIQAIGRWVLETACT 567 Query: 562 WLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 LAT SVN+ L + R+I + P + +E+TE + Sbjct: 568 QLATWAADPATADLVLSVNVSARELHEPQFVERVIEILACTGARPARLKIELTENAVLDH 627 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + S+ +++L G R+A+DDFGTG+ + LKRL D +KID FV+D++T+T DA I Sbjct: 628 VDDSIAKMKRLKAHGIRLALDDFGTGHGSLSLLKRLPLDELKIDRTFVQDLLTDTHDAAI 687 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 R+I L +SVVAE VET Q+ LL G + QG L G P L Sbjct: 688 ARTIAALGLNLGISVVAEGVETPAQRDLLIACGCRIFQGDLFGPPAALE 736 >UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPZ0_9BACI Length = 975 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 105/568 (18%), Positives = 201/568 (35%), Gaps = 25/568 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIA 240 + + + R+ E+ +L V L Sbjct: 393 RVSLTQLINASSSDIRKLSENIQISEEYYRSLFENNTDFVYSTDLEGRFNSVNPTFLKTF 452 Query: 241 GYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET--EYSLAFILA 296 GY + + + + + Y + + I Sbjct: 453 GYSEEELIGKLSISFIFEEDIPRIKRHFYRTLSGKEQFYEIWIPSKSGEVQLFHIKNIPI 512 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 + V L + R + + A D T LPN + E+ + Sbjct: 513 TVDGHCVGLFGIGRNITEQKKTEEKITYLAYFDAETGLPNRIKFRELAEEFISRAKKKKR 572 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 L ID + ++ G + + + + + L + + +++S Sbjct: 573 RIGVLFLDIDRFKLINDTLGHSAGDQILIELAERIKNALPKGAYLGRFGSDKFTILISKN 632 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 T +L+ + ++ I N + G + + L LL + Sbjct: 633 VTNEKLKQVAELIAENIQMPIIQGNQEFYIKASIGVGVYPDHGTDLADLLKNADTALNWA 692 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 ++ + ++ ++V + + +R AL++ +L + QPI +K G + + Sbjct: 693 KSNGGDQIV-FYTNEMNIMAMEKVKMESYLRKALEREELYIVYQPIVELNDKRVIGAEAL 751 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 L G+++P +F+PL + L VL K SVN+ Sbjct: 752 LRWNHPYLGVVSPMEFIPLAEETGLIGSIGNWVLTEACKQAKEWQEKGFPDFYISVNVSA 811 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q + I K +S +++ LE+TE ++ ++ +E+L G +IAIDD Sbjct: 812 NQFQQPSFTNEINHALKTSGLSAESLCLELTESVMIQHSGHTIDRMEELAALGVKIAIDD 871 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK L ++KID FV++I ++ D IV++++ + K + VV E +ET Sbjct: 872 FGTGYSSLGYLKHLPLHVLKIDKSFVQNIEESSPDYAIVQAVSMMGKGLGMQVVVEGIET 931 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q LL L QGY I RP + Sbjct: 932 SEQMVLLSHLNCDLGQGYFISRPVFPDE 959 >UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPK3_9GAMM Length = 842 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 124/758 (16%), Positives = 233/758 (30%), Gaps = 41/758 (5%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 + L + + + + ++ L Sbjct: 75 RRLMATLVLATAFLAVGLLDFLHLMTYPQMPDFITPNSSQQTIFFWLAARLVGALALLLY 134 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 L ++ G+ V L A L + + ++ G+V Sbjct: 135 VALPLVPRSQGPAPRGMLAGALVLVALLAWVGLWHEQRIPALFIPGEGLTPFKIALEGVV 194 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL------------IY 179 + + L+ A I ++ L + Sbjct: 195 VALHAATLVILLLRPQLMQRPGMPLVAAALMILMASEVFFTLYDNLSDGFFVLGHIYKVA 254 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPY 234 Y I S R +++R L A VL+ +L Sbjct: 255 AYALIYWAVFIESVRAPMAQLRAAHRDIELRQQRYEQLIDTAPDGVLVTDGGGTILMANR 314 Query: 235 ENDFIAGYLVPVFF------IIFTLGVGKLRYPFLNLTWAVSTLCLLNY-NQNFLQGVET 287 + + GY +I R L +S + + + T Sbjct: 315 NLERLFGYPRRHLIGQPVENLIPERLREHHRSVRLQQGDNISERTMGQIPDLRGRRLDGT 374 Query: 288 EYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 E+ + L + +R + R QA D LT LPN L Sbjct: 375 EFPVDISLNAFEDQGGRRITAFIRDITDRQRREARIQHQATHDSLTGLPNRWLLHDRLAQ 434 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 E + L +D+ + ++ +G +R + + L + + + G Sbjct: 435 SIAHASRHEHRIAVMLLDLDHFKMINDTFGHHEGDELLREVAQRLKDAAGTDATIGRFGG 494 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWN-NTGLDMGYGAAWGRFDGNQETLQPL 454 E +++L E ++ + ++ H F + L Sbjct: 495 DEFMILLPEITDELQVGERGQEILAQFDRPFHTGPTRQFSSSASLGIALFPQDARDANTL 554 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 + ++ E + Q + L ++ AL+ L L+ QP+ + Sbjct: 555 VRYADMAMYEAKRSGRN-TYAFYSEHLDAQVRAEQQLQERLKHALEHDQLALHFQPLIDA 613 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + +L + G + P +F+P L V+ + LA Sbjct: 614 HSGAVTAAEALLRWNDPELGAVPPSRFIPSAEANGLILPLGDWVIRRACQQLADWAQLDV 673 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +N+ L Q ++ R+ K SP+ + +E+TE A ++ + ++ L Sbjct: 674 DTSICINVSALQFRQPDLVSRLAAALKEAGASPEHLEIEVTETVAMADVALTREHLSGLK 733 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G R+++DDFGTGY++ LK L D IKID F+ I + MI+RS+ L + Sbjct: 734 ALGVRVSLDDFGTGYSSLAYLKSLPIDKIKIDRSFIAGIGHDRDAEMILRSVMGLGHSLH 793 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L +VAE VET +Q A L + G QG+ + + Sbjct: 794 LKLVAEGVETAEQLAFLRREGCDLYQGWFYSPALSVEE 831 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 105/578 (18%), Positives = 211/578 (36%), Gaps = 33/578 (5%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 + + + + + + + + L Sbjct: 414 AHGQPLRTLAVLKDVTEQKRLALELAAEKERIEVTLHSIGDGVISTDEAGRITYL--NPV 471 Query: 236 NDFIAGYLVP---------VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + G L+ V + L P + + Sbjct: 472 AEQMVGCLLAQARGLPFAQVVQLFDQESGAPLPSPVEQCLQDREVYGV-RESAALRHRSG 530 Query: 287 TEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 +Y + A + +L + + + L ++ A D LT LPN + Sbjct: 531 RDYGVQISAAPIAGRDGRVLGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDR 590 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + +D+ + ++ G + ++++ + L ++ ++ + + Sbjct: 591 VHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICR 650 Query: 396 LPGSELLLVLSGPETEGR--LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 L G E +++LS + + + + ++ T +++G F G+ E Sbjct: 651 LGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPGDGED 710 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 L+ + +S + V + ++ L +R AL G +++ QP Sbjct: 711 PDTLMKRADAAMYRSKREGRNR-YHFFSKAVDDAASARLQLEADMRRALAAGQFIVHYQP 769 Query: 511 IRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + + +L + G+ +P F+P+ + L VL + L Sbjct: 770 VVHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWS 829 Query: 568 -CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 G +VN+ P+ L Q + + + + + EITE + E+++ Sbjct: 830 GTALGGISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEM 889 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + +L G RIAIDDFGTGY++ LKR D +KID FV+D+ + D +VR+I + Sbjct: 890 LRRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAM 949 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 A++ L VVAE VET+ Q A+L + QGYL RP Sbjct: 950 ARSLRLHVVAEGVETEAQAAILAAMECPAFQGYLFARP 987 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 35/364 (9%), Positives = 74/364 (20%), Gaps = 54/364 (14%) Query: 14 FTLAFTLTVVLIQLSRFISPLAIIHSSYIFL----------------------AWMPLCV 51 + L V + S A S L + Sbjct: 76 WPLHLLAMAVANVAANLFSGHAPGLSLSFLLPNLLEASLAAALLRLAGPPARCVQQVGAL 135 Query: 52 MLSILFIFGWRGVVPVLCGMFCTNLWNFHL---SFLQTAVMLGSQTFVVLCACAILRWQL 108 + +++ +V G ++ + V VL +L + Sbjct: 136 LWALVLGAVVPSLVGATMGAAVLSMQFDAPVGSLWSAWFVGTVIGGVSVLPLGLLLLARG 195 Query: 109 GTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY--LVGSFFDFPLKISTFFGDADAIFTV 166 G L V + S + + S + F A + Sbjct: 196 GRAVWAALARPAVAAVVLVAVATAASASVFSHFRYVYVSVALMLVAAVGGFAGAATGGLL 255 Query: 167 VDLLSLFTAVL---------------IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 L L + + + A R+ + +E Sbjct: 256 ASLSVGIVIALGLFQPGPGEGWLETVAFYLPVVLTLVPPLLLAAAMERNRQHVHEIEDRE 315 Query: 212 KRAFTLSWLAALS-----VLLLLLCTPYENDFIAGYLVPVFFII----FTLGVGKLRYPF 262 + TL + V L+ GY F + R Sbjct: 316 AQFRTLYERTPVMMHSVDVERRLVAVNDAWLARLGYERSEVLGRRSTEFLTAESRERAER 375 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLN 319 + + L + + + + + L +++ + L Sbjct: 376 SIIPRFMREGELRDMDYQMVTRSGEVLDVQISAIWETDAHGQPLRTLAVLKDVTEQKRLA 435 Query: 320 RRWH 323 Sbjct: 436 LELA 439 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 101/590 (17%), Positives = 205/590 (34%), Gaps = 40/590 (6%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA-----LSVLLLLLCT 232 I Y+ R ++ + ++ A +W + L Sbjct: 110 ILAHRLRYMVR-ASDITEQLEELQKSESRLGNAQRIARLGNWEWDLKSNEIYWSEQLYHM 168 Query: 233 PYENDFIAGYLVPVFFIIFTLGVG-KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + +A F G L +N + Q + ++ Sbjct: 169 LWLRRGVAKPSFRGFISRLPHGERKDFMGWIQGLRHGAKEEQRGGWNHSLNQADGSRLNV 228 Query: 292 AFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--- 345 V + + V + A D LT L N A + E Sbjct: 229 QHQAEVFYDENGAAKVVSGTVVDVTELTQAQDQILQLAHFDSLTGLANRNAFRKRVELAM 288 Query: 346 -----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE--------- 391 + L +DN + ++ G + ++ + R L +++ ++ Sbjct: 289 ERAKQYGHLGAVLFLDLDNFKRINDTLGHSIGDQLLQEVARRLTDIVRGSDSICGTNFNH 348 Query: 392 -----KLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGR 443 + +L G E ++L +H + + I+ + + + Sbjct: 349 AIDDNLISRLGGDEFTVLLPEIGKIKDAEHAARRVLNSIGDIINLSGHDIVVTPSIGIAI 408 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F + E + LL + ++ +++ L + +R A+D + Sbjct: 409 FPHHGENVDSLLKNADAAMYYVKRAGKND-YELFVNSMNVVAKRRLELESFLRHAIDNKE 467 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L + QP + G + +L + G+++P +F+P+ + L + VL Sbjct: 468 LSVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAEETGLISPIGEWVLREAC 527 Query: 561 KWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + + D + +VN+ ++++ + ++ + + LEITE + Sbjct: 528 RQVKEWRDDGLPEIQIAVNISVQQFAKQSLDKLVSKVLLETGLPVHCLELEITENMLMDD 587 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 E ++ + +L G +AIDDFGTGY++ LKR D +KID F+ + T DA + Sbjct: 588 VEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKLKIDRSFITYVTTEPSDAAV 647 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++I +A L+V+AE VE Q L + + +QGY RP +D Sbjct: 648 TQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFSRPLIASD 697 >UniRef50_Q3IEE0 Putative orphan protein; putative conserved domain n=3 Tax=Alteromonadales RepID=Q3IEE0_PSEHT Length = 1002 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 105/657 (15%), Positives = 217/657 (33%), Gaps = 28/657 (4%) Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 R + + F L ++ I + ++ S + Sbjct: 331 GLDWYVGVYKKRSSTFSALADLKMKFFGLFILYAILVALLLHQALYQLVLRRIHSLVYAV 390 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL-- 217 + + + L M + + I EK A L Sbjct: 391 TNFGQGQLQIEFPKENKDEIGTLNGSFKDMTIEIRKLIDGLNQRIIEKEIAEKAARRLSK 450 Query: 218 -SWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAV 269 + V++ + + + + F + ++ ++ ++ + Sbjct: 451 AVAFSGTGVVITDKNFVIEYVNPKMLEMTSFSEEHFNRAPLLSIIASEMAILIDDIDVDL 510 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + + ++ ++ + + + + R+ A Sbjct: 511 RSRNCWRGDTLIESNNKAPIWVSLSISPIREDDGTITSYVASAQDISFVKESQRKMEQLA 570 Query: 327 LTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT L N + + +D + ++ G + Sbjct: 571 YFDTLTGLANRTFFRMQLRKSMALAERGHYAFALFYFDLDEFKRINDTLGHNAGDQLLVE 630 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDM 435 + L ++ + + +L G E ++LSG E + + N + + I + + + Sbjct: 631 VANRLKQRLRAEDTIARLGGDEFAILLSGIEHQEHATQVANTIQKTLNEPIQLGSNEVII 690 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + LL ++ A + ++ +++ + N + Sbjct: 691 SASIGITMAPYDSQEEDQLLKHADLAMYEAKAKGRN-TFHFYSQELNTAANERLFIENEL 749 Query: 496 RTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ L +Y QP + GY+ +L G + P KF+P+ L Sbjct: 750 RQAIKDKQLTVYYQPQIDSRTQLVVGYEALLRWFHPTEGAIAPTKFIPIAEATGLIVELG 809 Query: 553 LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + + ++NL ++ + ++ +S +++ LE+T Sbjct: 810 EWVLHQACNFAVKLERQGRANNIAINLSARQFKDASLLPTLKKIIASTQVSAKSLHLELT 869 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E N E+++ + +L G I+IDDFGTGY++ LKR DI+KID F+KDI Sbjct: 870 ESMLMGNVEAAIAQLHELKGLGVSISIDDFGTGYSSLSYLKRFPVDILKIDRSFIKDIPD 929 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D I +I +A+ L VVAE VET +Q L +QGY P D Sbjct: 930 DNNDMAITAAIIAMAQKLKLDVVAEGVETVEQVEFLKNNNCFIVQGYYFSPPIAERD 986 >UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0L7_9PROT Length = 951 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 106/596 (17%), Positives = 207/596 (34%), Gaps = 28/596 (4%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP--HFAQILWRRDIAPSLGKEKRAFTLS 218 ++ + + F R I S T Sbjct: 334 ITHRLIMADGRVKWVEARGSNYFDPEGRAIRSAGTVQDVTFREEAATQLRIAAVAFDTQE 393 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + ++ + + G+ + + ++ ++ + Sbjct: 394 AIMVTDKEANIIKVNHSFELTTGFSEQEVLGKNPRLLGSGRHNQDFYKSMWEVLNRVGSW 453 Query: 276 NYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + + Y + + + + + H A DPLT Sbjct: 454 SGELWDRRKNGEIYPKWLTITAVKNRDEISHYVGVFVDITERKKAEEEIHNLAFFDPLTQ 513 Query: 334 LPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN R L + + + +D+ + ++ G + + L Sbjct: 514 LPNRRLLLDRMRLALGLSARSKNFGALMFIDLDHFKVLNDTKGHEYGDKMLIEVSHRLTQ 573 Query: 386 LMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 +++ + + + G E +++L + + + S+ + + Sbjct: 574 SLRDTDSVARFGGDEFVVLLESLSVNQDIAVAQAGSIAEKMRESLSQTYIIESYAHESTP 633 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F+G+ + LL + Q+ + E + + L+ +R Sbjct: 634 SIGVVLFNGDAIEIDELLKRADLAMYQAKESGRN-TVRFFESAMQATLESRTLMERALRQ 692 Query: 498 ALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 AL + LY Q N E G + +L G ++P +F+PL Q L V Sbjct: 693 ALSNSEFELYYQVQTNQANELLGAEVLLRWHSQSLGPISPAQFIPLAEQTKLILPIGEWV 752 Query: 556 LESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 LE+ L R +VN+ P+ Q + ++ ++P+ + LE+TE Sbjct: 753 LENACARLKAWETHPTLSKLRLAVNISPVQFHQPDFVRQVQAALTDSGVNPRRLELELTE 812 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + + ++ + L G R ++DDFGTGY++ + +KRL D +KID FV+DI+T+ Sbjct: 813 NLVLEDVDEAIQKMSALKALGVRFSMDDFGTGYSSLQYIKRLPIDQLKIDQSFVRDILTD 872 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DAM+V++I +A+ V+AE VE Q L + G QGY RP LA+ Sbjct: 873 PGDAMMVQTIAGMARNFGYEVIAEGVEEHAQLLPLIERGCNTFQGYFFSRPVALAE 928 Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 12/205 (5%), Positives = 39/205 (19%), Gaps = 12/205 (5%) Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 + I + S + + F + + + L N L R Sbjct: 181 AIFVAISLFASFVIGILLHVLVTRRVNLLSAISKQFAAGNYNA--RSELKGNDELSELGR 238 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP--V 246 + + A + + + L + + + + Sbjct: 239 SFDTMALRVTENIALQQRAQDFLSEAQKIGHFGSWELDLHSGRLNWSEEIFRLFEIDPAQ 298 Query: 247 FFIIFTLGVGKLRYPFLNLTWA-----VSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 F + + ++ + + + + Sbjct: 299 FSPSHEAFLSIIHPEDREAVNQAYTNSLTNKQSYHITHRLIMADGRVKWVEARGSNYFDP 358 Query: 302 SVCLL---YMVRIYHRSEWLNRRWH 323 + V+ E + Sbjct: 359 EGRAIRSAGTVQDVTFREEAATQLR 383 >UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Chroococcales RepID=Q31P31_SYNE7 Length = 1047 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 110/563 (19%), Positives = 204/563 (36%), Gaps = 30/563 (5%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF--- 247 ++ A E+R L+ V L L + + G+ Sbjct: 478 DISDRKKIEAELQTSEERYRLLAENMNDLVCLHQADGTYLYVSPSAEALLGFSSEEMVGQ 537 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 AV L + + + ++ ++ Sbjct: 538 NPYDFFHPEDCDRIRDEAHQAVLMGAELPIVYRMRKKLGGYIWFETLTKPIMDDQGVVIG 597 Query: 308 ---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QEAGKSFCCL 355 R + + + A D LT L N L + E Q + L Sbjct: 598 LQTTSRDVTQRIEIQNQLQYDACHDSLTGLANRNLLIERLELSLKRSKRLQNYKYAVLFL 657 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + SI + L +++ ++ +L G E ++++ +T Sbjct: 658 DLDRFKVINDSLGHITGDQLLVSIAQKLQSIIRSHDLAARLGGDEFVVLVEDIQTFDEPI 717 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + + E+ LL ++ + Sbjct: 718 KVAERILAAIQVPLELEERSIYTSTSIGIVFGSHEYESATQLLRDADTAMYRAKSRGRAR 777 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + + + Q ++ L N +R A+ + + +LY QPI + G++ ++ Sbjct: 778 -YEVFDSAMHSQALARLHLENDLRQAIARQEFVLYYQPIIQLQTGKITGFEALIRWQHPT 836 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQ 586 GI P +P+ + L D VL + L+ SVNL L Sbjct: 837 EGIKLPIDLIPIAEETGLITSIDYWVLNQACRQLSEWQASYSQAADLSMSVNLSAQNLQH 896 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ I + + I P ++ LEITE N + ++ + +++ G I+IDDFGTGY Sbjct: 897 DHLMDEIQSVLQATKIKPGSLTLEITESMLIENTDQTIQLLAAINEQGIEISIDDFGTGY 956 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L +L + +K+DG FV+ I T + + IV +I L L +AE +ET +Q Sbjct: 957 SSLSYLHKLPVNNLKVDGSFVRKITTESTNYQIVNTIIALNNQLGLKAIAEGIETHEQLD 1016 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 LL +LG QY QGYL RP D Sbjct: 1017 LLSQLGYQYGQGYLFARPLNAKD 1039 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 3/147 (2%), Positives = 20/147 (13%), Gaps = 16/147 (10%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAA----------LSVLLLLLCTPYENDFIAGY 242 + + R ++ + + Sbjct: 344 IQQELSDRSKAELALQESQTRFQRIADNLPGIIYGYKLRQDGTDQFTYISSGFREVYGID 403 Query: 243 LVPVFFIIFTLGVGKLRYPFL----NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + ++ + TL + + Sbjct: 404 PETALENSNVVWGMIHPEDIEYLKTSIIKSQQTLKTWKVEYRIITKNGELKWMQGRARPT 463 Query: 299 ISFSVC--LLYMVRIYHRSEWLNRRWH 323 + ++ + + Sbjct: 464 RQENGETFWDGLIIDISDRKKIEAELQ 490 >UniRef50_Q1N453 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1N453_9GAMM Length = 800 Score = 668 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 102/573 (17%), Positives = 210/573 (36%), Gaps = 36/573 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYL 243 M+ + ++ + E++ L+ L+ + + + + I G Sbjct: 218 MVDVFNSMLSKIEQERSDLTSSEEKFRQLASLSPVGIFQINLKHDITYVNNRWSDITGIR 277 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTW---AVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 P + L + + + F + + +VL Sbjct: 278 QPNATLEHWLSHIRQEDRRAAVRAWRNLIENHQEFVVEVGFERNRDQITWAIIEASVLYD 337 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + + + A DPLT L N R + + + Sbjct: 338 GQGEIYGYMGAISDITDLKVAQLQMENLAFFDPLTGLSNRRLFKDRLHKSISESKRRGSF 397 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + R L ++E++ + ++ G E ++L+ E Sbjct: 398 VALLFLDLDQFKRINDSLGHDAGDVLLEETARRLENSVRESDTVSRIGGDEFTVLLNDVE 457 Query: 410 TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 ++H+ + R I N + + + + L+ Q+ Sbjct: 458 NTHGVRHIAEKILKKVCRPIMVKNQEIINTVSIGITLAPTDGDDVNTLMRNADMAMYQAK 517 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ-GDLLLYAQPIR---NKEGEGYDEI 522 A E ++ + + + +R ++D D ++Y QP + G + + Sbjct: 518 AMGRN-NYQFFSEEMNKEMMGYLEIEKDLRHSIDYPEDFIIYYQPKIELHSGRFVGAEAL 576 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA------THPCDKKGPRFS 576 + ++ PD+F+P+ + L V+ + P D + + Sbjct: 577 IRWKPEGKDMIPPDRFIPIAEESGLIVPIGAHVIRQACLQVKYMINTGIWPEDG---KVA 633 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +NL ++ ++ + ++ + EITE N E++++ + Q+ + G Sbjct: 634 INLSARQFSDPDLICKLQEILEQTKCPVHVLEFEITESTLMDNVENAIFTMRQIKEMGIS 693 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IAIDDFGTGY++ LKR D++K+D FV DI + D I ++ +A L VVA Sbjct: 694 IAIDDFGTGYSSLAYLKRFPIDVLKVDRSFVMDIPNDLNDMEITAAVIAMAHKLHLQVVA 753 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E +ETQ+Q L +Y QG++I RP P + Sbjct: 754 EGIETQEQIDFLKSNYCEYGQGFMIARPMPSDE 786 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 668 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 127/649 (19%), Positives = 219/649 (33%), Gaps = 31/649 (4%) Query: 109 GTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVD 168 W + + V + I+ L G+ + A + Sbjct: 47 ALIWLVAQSPKLVILDYSLPDMTGASLIERMRELGGNTPFIVVTGKDDASLAVEMMKTGA 106 Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 L + L + R + + R E R +A L Sbjct: 107 CDYLLKDTSFLDRLLAVVVRALQEV-ETRERLDRAKHSLRLSEARLARAQKIARLGSWEW 165 Query: 229 LLC---TPYENDFIAGYLVPVFFIIF--------TLGVGKLRYPFLNLTWAVSTLCLLNY 277 + + ++ + + L L +V TL N Sbjct: 166 DVRAGEIYWSDELYRIFGFTPGEPKRISKEWIYSLIHPADLPAFKQQLLTSVKTLQSFNM 225 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + E + V + V H D LT L Sbjct: 226 IYHTTSRSGGELVVNIQGEVERGEDGRAWLISGTVLDITARIKAESEIHHLINYDTLTGL 285 Query: 335 PNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN L Q ++ CL +D + ++ G ++ + R L Sbjct: 286 PNRSLLHDRLRQAIAQAAQDRHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVARRLAAC 345 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 ++E++ L +L G E ++VL G +E + + + I ++ L Sbjct: 346 VRESDTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTASIGIAA 405 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + E LL ++ ++ + ++++L N++R AL++ + Sbjct: 406 YPMDGEDGHTLLKHADLAMYKAKELDRN-NFHFFSHDMNIKVMERMMLENSMRKALERDE 464 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L QP + G + +L D G++TPD+F+ L + VL + Sbjct: 465 FFLVYQPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWVLMTAC 524 Query: 561 KWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + R +VNL Q + I + + P+ + LEITE N Sbjct: 525 RQNRAWQKLGFPPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITESAIMRN 584 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 A+ ++ + L + G +AIDDFGTGY++ LK +KID FV+DI TN DA I Sbjct: 585 ADQNIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTNPDDAAI 644 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I +A+ L+V+AE VET+ Q L +QGYL RP Sbjct: 645 AEIIIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTD 693 >UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAR7_SULNB Length = 958 Score = 668 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 98/564 (17%), Positives = 207/564 (36%), Gaps = 31/564 (5%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPV 246 + + R T+ +++ ++ + GY Sbjct: 385 AIKLDVTAYIRQQKILQQA----ATVYENIGDGIVITDENKKIISINPAFSDLFGYTKEE 440 Query: 247 F---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF-- 301 + + + + + + N+ + T + + + +AV+ + Sbjct: 441 LVGKEPMIIMSLKEDKVFYGNMWHQLLTAGRWSGRVENVTKDGKVLPVWLTIAVVRNEKQ 500 Query: 302 -SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSF 352 + + + + + A D LT LPN + E + + + Sbjct: 501 DIQNYIAIYTNLEEIIKMETKANYLAYHDSLTGLPNRSSFEMRINEILSVADIEKDKIAV 560 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D + ++ G + + + + + + L ++ G E ++++ + Sbjct: 561 LFIDLDRFKVINDTLGHHIGDEMLIELAHRIQTQLDNDTLLARIGGDEFVVIMKLKMHKK 620 Query: 413 RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 L I N L+ + + + ++ + Sbjct: 621 EAGEQAEKLLDVIREPIDIQNYHLNTTASIGIAIYPDDGKDKNEIVKHADSAMYHAKEKG 680 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARL 526 + +S ++ L + A+++ +LLL+ QP E G + +L Sbjct: 681 KD-TFQFYTKQLSLDVEARLNLEQELLHAIERKELLLHFQPQYALESRNIIGVEALLRWK 739 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLL 585 GI++P+KF+ + + L V E K + S+N+ + Sbjct: 740 NEQLGIVSPEKFIGIAEETGLIVSIGYFVFEEACKTYMHWQKEGIDIDSISINMSSIQFR 799 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 +++I R+ + R I + +EITE + ++ +E L G +I+IDDFGTG Sbjct: 800 EEDIFERLQEIILRIGIPAHKIEIEITERFIMEYSTINLTILEDLRNIGCKISIDDFGTG 859 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL D IKID F+ D+ ++ DAM+ ++I L+K+ V+AE +ET +Q+ Sbjct: 860 YSSMSYLKRLALDTIKIDKSFITDLPHDSHDAMVSKAIIALSKSLGYQVIAEGIETPEQE 919 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 A L K G QG+ +P D Sbjct: 920 AFLKKNGCDIGQGFYFAKPMTSED 943 Score = 65.4 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 6/125 (4%), Positives = 21/125 (16%), Gaps = 10/125 (8%) Query: 213 RAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLN 264 + +++ + GY + N Sbjct: 281 AFRYAIENSDNVIVITDAQRHIEYVNDAFELRTGYKKEEVLGENPNILKSDLVSPEIYKN 340 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRW 322 L + + + + + + + L + + Sbjct: 341 LNETLDSGEKWQGELINKRKDGSLIYEKVSIVPIFMDGELIQYLAIKLDVTAYIRQQKIL 400 Query: 323 HLQAL 327 A Sbjct: 401 QQAAT 405 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 668 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 115/651 (17%), Positives = 224/651 (34%), Gaps = 28/651 (4%) Query: 105 RWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF 164 R + R L + + + + + D P + + + Sbjct: 35 RVETAEAMRAALATGKWDLIISDYSMPRFSALAALEVARENGLDLPFIVLSGNIGEETAV 94 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 + + + + + RR EK ++ A Sbjct: 95 EAMRAGAHDYVMKGNLARLLPAIERELREAEERRRRRRAELELRNSEKLFRSIFQNAVTG 154 Query: 225 VL-----LLLLCTPYENDFIAGYLV-PVFFIIFTLGVGKLRYPFLNLTWAVSTLCL---L 275 + L + GY +F + +A + Sbjct: 155 MATCSPDGRFLKVNPALCEMLGYSENELFGVSVLDITHPTDIELTERLFAEAMGGQTRSH 214 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 +Y + +++ + + + ++ ++ A D LT Sbjct: 215 DYEKRYIRRDGETLWAHVSTSWHYNEDGTPSYSVALISNITPHHQAKQKIRQLAYFDGLT 274 Query: 333 LLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN + + + C + ID + ++ YG ++++ + L Sbjct: 275 GLPNRQLFLEHCNSSLTQARRNRSPLGVCIIDIDRFKGVNDTYGYESGDALLKTVSQRLS 334 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAW 441 M + L +L E V++ ++ + + + I L G Sbjct: 335 DCMSREDVLARLGSDEFAAVIASVGSQDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGI 394 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + + LL + Q+ H + ++ +++ + +R ALD Sbjct: 395 ALFPVDGVDAEALLKNAATAMHQAKQHGSN-NFRFFSKGMNRMAWERIEIETGLRRALDL 453 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 L L+ QP + G + +L + G ++P +F+PL + L VLES Sbjct: 454 QQLALHYQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWVLES 513 Query: 559 LLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + R +VN+ Q R+ + +R I+P+ + +E+TE Sbjct: 514 ACRQAKAWHRAGFPSLRMAVNISARQFKQAGFIDRLDAIIQRSGINPELLEMELTESLIM 573 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 ++ ++ + + G ++AIDDFGTGY+ LK D IK+D FV+DI NT DA Sbjct: 574 EKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDA 633 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I +I +A + + V+AE +ET++Q A L + QGY GRP P+ Sbjct: 634 AITEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVPVE 684 >UniRef50_Q2S9L1 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=2 Tax=Proteobacteria RepID=Q2S9L1_HAHCH Length = 1263 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 97/577 (16%), Positives = 198/577 (34%), Gaps = 25/577 (4%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 L + R + A+ R L+ L+ Sbjct: 528 LLEQLADDLYYGVVSLRTRHAREKAEESLRLRNRAVESTPNGILILNARRPDLPLV---Y 584 Query: 232 TPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + I GY F +L + + + + Sbjct: 585 VNPAFERITGYSSDEVLGKGPFFLQSDIDEDRRRESLHFLIRNREEGCVLLRNQRKDGSP 644 Query: 289 YSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 + +A + + ++ S + QA D LT LPN + Sbjct: 645 FWNELHIAPVYDDRRMLTHFVAVINDVTESRHYQEQLEYQATHDDLTGLPNRNMMRDRLG 704 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + L ID + ++ G ++ I + L + + ++ + + Sbjct: 705 QELWRAARNKHKVAIVFLDIDQFKLINDSLGHNAGDAMLKVIAKRLTGMARASDTVVRYG 764 Query: 398 GSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +++L ++ ++ L ++ I ++ + + + + + + L Sbjct: 765 GDEFVIILPDISPPEKVASFISRLMEVIAQSIQLDHRDIHVSASIGVSIYPQDGDHPEVL 824 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 + + E ++ +++ L +R ALD+ L QP + Sbjct: 825 IKNADIAMYLAKEEGRNR-FHFFTEDLNKTAMERLDLEVRLRAALDKQQFHLEYQPQVDL 883 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-K 570 G + +L + + G + P KF+P+ + L VL + Sbjct: 884 RSGVITGVEALLRWREPELGDIPPGKFIPIAEETGLIGAIGEWVLHAACVQAKAWSDLVA 943 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 S+NL L + + + + + +E+TE N + L Sbjct: 944 HPLTMSINLSAKQLTMARFDSALHSILTDTAVDCRYIEIELTESAIMRNVNEMRERLNIL 1003 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G ++A+DDFG GY+++ L+ D +K+D FV+DI T+ A I R++ +A++ Sbjct: 1004 KEQGLKLAVDDFGVGYSSFSHLRSFSFDRLKLDITFVRDITTDPNTASIARTVMSMARSM 1063 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + VVAE +ET+ Q L +LG QG+ +GRP Sbjct: 1064 HMQVVAEGIETEAQLRYLQRLGCDVGQGFFLGRPACA 1100 Score = 47.7 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 11/127 (8%), Positives = 26/127 (20%), Gaps = 11/127 (8%) Query: 211 EKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP---F 262 E R + + + + G + Sbjct: 43 EARFQYILDDIPELICRWKPDGAITYVNAQYCRYFGSSRSALIGKSIFTLSPPEECSVIH 102 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLN 319 + T + + + G + L + + +L + R S N Sbjct: 103 EQMRRISQTSPVSQQERRVIDGRGAQRWLLWTDRGIFDSQGRVLEFQSIGRDITDSRETN 162 Query: 320 RRWHLQA 326 + A Sbjct: 163 EQIGSMA 169 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 133/635 (20%), Positives = 218/635 (34%), Gaps = 31/635 (4%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 L + + P S ++ L S L Sbjct: 409 LAKTATHVIPRRVSELFPCTAHLSKRRAHAYVGHRLVDSRGQAIGQLFVLFSRPLHETAF 468 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA--FTLSWLAALSVLLLLLCTP 233 + +F + A RR + + L Sbjct: 469 ITSTLQIFASRVAAELERQSADAHIRRQASLLDKAQDAIMVRGLDDAIRYWNKGAERLYG 528 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 ++ D + G + F T V N L+ T + Sbjct: 529 WKADEVTGRSTEMLLYGDPTA-------FRENTRKVIAHSEWNGEITQLRKDGTALVVEA 581 Query: 294 ILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK 350 +L + +L + + + H A DPLT LPN L + Sbjct: 582 HWTLLRDENDQPDAILAINTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQV 641 Query: 351 ------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +DN + ++ G M ++ I + L +++ + L ++ G E ++V Sbjct: 642 RHGQVGALLLIDLDNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIV 701 Query: 405 LSGPE-TEGRLQHMV----NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 L G + G + + + R + F+ TL L Sbjct: 702 LEGLSASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRK 761 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE- 515 + Q+ AH AL + + + L +R AL G L+ Q + Sbjct: 762 RADLAMYQAKAHGRN-ALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDARG 820 Query: 516 -GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKG 572 G + +L G + P F+PL + L L VL+ L Sbjct: 821 CVSGAEALLRWQHPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMAR 880 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VN+ Q + A +++ +R P+ + LE+TE N + ++ + L Sbjct: 881 LSLAVNVSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKA 940 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++DDFGTGY++ LKRL D IKID FV+D++ + DA I RSI L ++ +L Sbjct: 941 HGIGFSLDDFGTGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNL 1000 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VVAE VET Q A L + G Q QGYL RPQP Sbjct: 1001 EVVAEGVETDAQHAFLAEHGCQAYQGYLFNRPQPA 1035 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 13/164 (7%), Positives = 31/164 (18%), Gaps = 23/164 (14%) Query: 199 LWRRDIAPSLGKEKRAFTLS---WLAALSVLL-LLLCTPYENDFIAGYLVPVFFI---IF 251 + +A R + ++ + I GY Sbjct: 21 EAHQQLALLETSVARLNDIVLITEADHGGAAGPAIVFVNDAFEHITGYRRDEVLGKSVRL 80 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYM 308 G R + A+ + + L + + + + + Sbjct: 81 LHGPLTDRAEVRRIGEALENQRPVRSELVNYSKHGEPFWLELDVVPVTDANGYYTHCVAV 140 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSF 352 R R + + N K+ Sbjct: 141 ERDVTRRKEADLELARL----------NRAL---RVRSACNKAL 171 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 107/560 (19%), Positives = 204/560 (36%), Gaps = 30/560 (5%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 + R A + F + + L ++ + Sbjct: 28 QLQDRIMELERFHALLDRARELIFLV-----DAQNLHIIDVNAIVCSTLEASKESL--VH 80 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-LQGVETEYSLAFILAVL-ISFSVCLLYMV 309 + L + + ++ + ++ L F+L L + + Sbjct: 81 SEITQWLPHELIERMQRLAQGVEDSIMVEMGIENSGGVVPLEFVLQYLSFGEDDYFVILG 140 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 + H A DPLT L N + L + + +DN + Sbjct: 141 KDISERRHAESTIHTLAFFDPLTHLANRQLLHDRMAQALAKSQRHHKVGALLMIDLDNFK 200 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-----RLQH 416 ++ G + + + + + +++E + L ++ G E +++L G E + Sbjct: 201 ALNDTKGHHIGDELLIQVAQRIQTIVREGDTLARISGDEFVVLLEGLAHEESKAAQEAEK 260 Query: 417 MVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 L + F+G ++ + LL Q Q+ Sbjct: 261 FATRVKYLLNEPYELLGYEHTCSSSIGIALFNGQPKSKETLLKQADIAMYQAKEKGRNR- 319 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGG 531 + + ++ + + + +R AL + +L+L+ QP N + G + +L G Sbjct: 320 ICFYDPLMQENIEHKTTMEHELRMALSKEELILFYQPQVNLEGKIVGVEALLRWNHPQKG 379 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNI 589 ++ P+ F+PL + L VL + L+ D S+N+ + + Sbjct: 380 LIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEASF 439 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + ++ LE+TE + ++ IE L G ++DDFGTGY++ Sbjct: 440 YETVANAIALSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSSL 499 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL D +KID FV+DI + DAMIV++I ++A L V+AE VE ++Q L Sbjct: 500 SYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFLM 559 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G QGYL G+P P + Sbjct: 560 ENGCGLFQGYLFGKPMPPEE 579 >UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488U0_COLP3 Length = 788 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 133/744 (17%), Positives = 271/744 (36%), Gaps = 56/744 (7%) Query: 30 FISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNL--WNFHLSFLQTA 87 ++ + + LA M ++ F R V+ LCG+F + + Sbjct: 40 LRDLISGLLVGMLGLAVMNTSWEMAPGMFFDTRWVLISLCGLFFGLVPTLIAGAMMVSLR 99 Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL-VTPIGIKCSMYLVGSF 146 + +G +V C I+ +G + + + +L W L + I+ ++ Sbjct: 100 LHIGGAGILVGSLCVIIPGSIGCLF--AIILKRKNLKLDWFKLYSFGMLIQITVLGCMLL 157 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 L+ + + + ML + R ++ Sbjct: 158 MPEHLRYKVIGA---------VIQPVIVVFPVCTMLVGLILRRQRDRRKSEYDLTESQKL 208 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFI-IFTLGVGKLRY 260 ++ L + + + + G + G + Sbjct: 209 LNREQSLMRGLIGSLPDLISFKDVQGRYLGCNHAFEQFVGLTEQELKGKMDQELKGNFKP 268 Query: 261 PFLNLTWA---VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHR 314 + +++ + + ++ + ++ I F L+ + R Sbjct: 269 SDIAGLDEQEIIASGKVYSQDEWVVYPDGSKVLHETIKKTFDGFDGTRYGLMSVSRDITE 328 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------QEAGK-SFCCLRIDNLEFMSRH 366 + + A D LT LPN R L+ + ++ + + +D+ + ++ Sbjct: 329 RKNHEDQIQRLAFYDSLTQLPNRRMLQDRLQLLVTTSARDERFNALFFIDLDHFKTLNDT 388 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNIL 421 G M + ++ + +++ + + +L G E + ++S + + + + Sbjct: 389 QGHNMGDQLLIAVAARIQDSVRDEDIVARLGGDEFVALISNLGEDEATAGHVAEKVAEKI 448 Query: 422 ---NSRQIHW---------NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + N F N + +L Q Q+ A Sbjct: 449 RLSICQPYKLSIKENVDANNEMIFHCTPSIGISLFKSNLTSPDEILKQADVAMYQAKAAG 508 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLK 527 A+ + + + +L + A+D G+L L+ Q + K +G + +L Sbjct: 509 RN-AIRFFDPAMQIALEENAAMLAELHQAIDNGELELFYQIQIDETKGIQGAEVLLRWFH 567 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLL 585 G+++P F+P+ + L VLES L +++ + SVN+ L Sbjct: 568 PIRGMVSPLDFIPMAEESGLIIPIGRWVLESACHQLKVWENIPNRENWQISVNVSALQFQ 627 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q+N + + +I+P + LE+TE N + + + QL++ G ++DDFGTG Sbjct: 628 QENFVEIVQEIILSNNINPHGLKLELTESMVLDNVDIIIEKMHQLNQLGIDFSMDDFGTG 687 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL +KID FV+DI T+ DA IV++I +L+ + V+AE VETQ+Q+ Sbjct: 688 YSSLSCLKRLPLKQLKIDQSFVRDITTDPDDAAIVQTIINLSNSLKYDVIAEGVETQEQR 747 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L G QGYL RP P+A+ Sbjct: 748 QFLFNNGCSQYQGYLFSRPVPIAE 771 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 107/618 (17%), Positives = 200/618 (32%), Gaps = 34/618 (5%) Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + + PL + + + A M Y + Sbjct: 7 SFAFRLRHHRATLLVLSPLFLCVVMAPRYYSVALTAGFTFLIAAFCVAMGRYTI------ 60 Query: 193 PHFAQILWRRDIAPSLGKEKR-AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF-FII 250 W++A L+ T + I+GY F Sbjct: 61 ---TAQKLHESEKLFRTFADFIYDWELWISAEGSLIH---TSPACERISGYATTAFKNDS 114 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLY 307 L + ++ + + L + Sbjct: 115 DLLRRIIHPEDLQRYDRCENEATPGFREFRMIRRDGQLRWVELLSRQLRNEEGKDLGRRL 174 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAPEQEAG----KSFCCLRIDN 359 +R + A +D LT LPN AL+ +A + + + L +D+ Sbjct: 175 TIRDITGKKAREHEIRQIAYSDALTGLPNRLALKMDMDKALAKASRNTAMVAVLMLDLDD 234 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + L + E + L +L G E ++VL+ ++ Sbjct: 235 FKQINDTTGHAKGDEMLLLLTSRLREQLGEKDSLARLGGDEFVVVLNEIDSATCAAKKTE 294 Query: 420 ILNSR----QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + F N + LL ++ Sbjct: 295 KILASLRDNPFDLVVAKVFASASIGIALFPQNGRDAETLLKHADMAMYEAKNVGRN-TYR 353 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + + +T ++ L +R A+ + + L QP + + ++ + G+ Sbjct: 354 FFSDELHRRTIERHKLEVGLRRAVRKKEFFLVYQPQVDLGTGRIVALEALVRWQHPEAGV 413 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P F+P+ + L +L + R +VN Q ++ Sbjct: 414 LLPSTFIPVAEETGLIHIMGEWILRTACHQAMQWQRMGLPPMRIAVNFSARQFRQPDLVE 473 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI ++ + P + LEITE N ES++ + L +IAIDDFGTGY++ Sbjct: 474 RIEQILLESGLPPHHLELEITESVFMENLESAIETLVDLKTRAIQIAIDDFGTGYSSLNY 533 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK D +KI FV+DI + DA I+ +I +A + V+AE VET +Q L + Sbjct: 534 LKNFPLDRLKIAQDFVRDIPDDEDDATIIETIMAMANRLGIKVLAEGVETMEQVTFLRRK 593 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QG+ RP + Sbjct: 594 GCHEMQGFYFARPMQAEE 611 >UniRef50_C8WTB0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTB0_ALIAD Length = 799 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 124/758 (16%), Positives = 247/758 (32%), Gaps = 43/758 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVV-LIQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL---- 56 V + I I+++ F + ++ + + S +A + + Sbjct: 46 VVLGGVAMGIGIWSMHFVAMLALMLPAQMTYNWAVVALSLVFAMAGPGAALYVVARSASP 105 Query: 57 --FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY 114 +G + + M T + + G V+ A L +R Sbjct: 106 VKLAYGALLMGAGIVFMHYTGMAAMTVEGGGFYYRAGPFVLSVVIAIVASYVALWLSFRL 165 Query: 115 GLTSRYVWQRL-FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 ++ Q LV I I Y F L + ++++F Sbjct: 166 ATARGWLAQAAKVACALVMGIAIAGMHYTGMWATVFVLPAHRRAAPMAYSGPLALVVAVF 225 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT- 232 +A ++ + + + D ++R +L + ++ L Sbjct: 226 SAFILLAAIATVML---------DRRLQADRRRLRLADERFRSLYTHHSDAIFTLDTRGA 276 Query: 233 -----PYENDFIAGYLVP-VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 P + + + + + + R N G Sbjct: 277 IVDQNPRAKELVPEHELRKSARAFARMIDRRDRPRVFKDYRRALGGSTTNGEFLLRAGD- 335 Query: 287 TEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 ++ + + + R + R + A D LT L N R E Sbjct: 336 RALHMSATHIPIVLDDEIEGVFLVARDVTAEKVAAERMNYLAFHDTLTQLANRRHFEARV 395 Query: 345 EQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + +D + ++ G ++ I R L + E+ + ++ Sbjct: 396 DDFIRDARPGDEMQILFVDLDRFKSVNDTLGHEFGDKLLQEIARILKEVAGEDALVARMG 455 Query: 398 GSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E + L + R + + + + + + L M F + T L Sbjct: 456 GDEFTITLFR-QPMERAVAVADAILNRLRKPVRVEDRPLYMTASVGIASFPRHGVTRDML 514 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L + A EE + ++ L +RTA +GD ++ QP + Sbjct: 515 LRHADLAMYTAKAEGR-STYRLFEERTAANAKSRLELEQELRTAAQRGDFEIHYQPKIDM 573 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + +L + G + P +F+P+ + L A L + + + Sbjct: 574 RQKAVVGVEALLRWRRATGEYVPPCEFIPIAEETGLIAPIGEWCLRAACRQAKAWLDAGR 633 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL P +L + + + + +E+TE +AE + + Sbjct: 634 PLSVAVNLSPYQVLTDGFLDVVREVLDETGLPAHYLEIEVTESAMM-DAERAERFLAGCQ 692 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G +++DDFGTGY++ RL L +++KID F + V +V SI D+A Sbjct: 693 ALGIEVSLDDFGTGYSSLSRLTHLPLNVVKIDRAFTQRAVDGGRARALVASIVDIAHNLG 752 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + VAE VET++Q +++ LG QG+ RP P +D Sbjct: 753 MRCVAEGVETKEQLSVIEALGCDEAQGFYFARPVPPSD 790 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 92/430 (21%), Positives = 174/430 (40%), Gaps = 18/430 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + QA D LT LPN + + +D + ++ Sbjct: 438 QRQDKEEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLIND 497 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + ++ + L +++ + + + G E ++L E+ + + Sbjct: 498 TLGHSIGDELLKEVALRLQDCLRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDAL 557 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 L + + + + + LL +S ++ Sbjct: 558 KAAFVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTC-QLYNPTMN 616 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 +Q +L N++R ALD+ + +L+ QP N E G + ++ + G+++P F+ Sbjct: 617 --AKEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFI 674 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L VL + + ++NL Q N+ + ++ + Sbjct: 675 PIAEETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIE 734 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++PQ + LEITE A N E + + L G IA+DDFGTGY++ LK+L + Sbjct: 735 STGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFN 794 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F++D+ + D I+ ++ L K L VVAE V+ ++Q LL L + +QG Sbjct: 795 TLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQG 854 Query: 719 YLIGRPQPLA 728 YL RP + Sbjct: 855 YLFSRPLSVD 864 >UniRef50_A1WX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WX01_HALHL Length = 698 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 114/685 (16%), Positives = 216/685 (31%), Gaps = 34/685 (4%) Query: 69 CGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWL 128 T+ S QT + +VL + G L Sbjct: 5 LASPTTSTRALSSSLTQTLFLQSEDGMLVLRDGHFVACNPAAARMLGWDDPQQLIGLRPE 64 Query: 129 GLV------TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 + L+ + + + + + + L L L Sbjct: 65 AISPQIQPDGASAADRVQSLLRAAVSEGAQRFEWIHTSPEGGRLWFEIVLTPLHLDDETL 124 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 R I + + + +L I GY Sbjct: 125 CCATLRDISRRKEMERRLQLSAKVFTATRDGILITDADSR------ILQVNDAFTRITGY 178 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + + ++ + T ++ + Sbjct: 179 AEEELLGRTPRVLQSGHHDADFYRVMWESIHQQGSWSGELWDRTKYGTLQPKWVTISKVT 238 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------A 348 + + + + R QA D LT L N + + Sbjct: 239 GAYGEVINFIAVFSDLTELKRSQERLQFQAYHDALTGLANRLLFKDRMARALERSRQSEE 298 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D+ + ++ G +R + L + ++ L +L G E + L+ Sbjct: 299 QLAVLFIDLDHFKDVNDSLGHTAGDRILRQVAHRLQARLGADDTLARLGGDEFSICLAEI 358 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + R ++ + N ET++ L+ + Sbjct: 359 RDHRDALACAETVHQELERPFQYSQRWFQCRCSIGISMYPDNGETVEELIRNADSALHNA 418 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 A E ++ + +++ L +R L +G+L+ Y Q + G + + Sbjct: 419 KAEGRNTT-CFYAEELTERAQRRLDLAQEMRQGLQRGELIPYFQHQVDLTTGRVVGIEAL 477 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMP 581 + + G++TP F+P+ + A +L + T ++ R +VNL Sbjct: 478 VRWHHPERGLLTPGAFIPVAEEVGTMAALGEDILLQACQQGRTWLDQRREFGRVAVNLSA 537 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 +I + R ++ + Q + LEITE + ++ + L + G ++IDD Sbjct: 538 AQFHNGDIEKTVRRTLEQTGLPAQCLELEITESTIMDLSPRTLERLAALRRAGVSLSIDD 597 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL + +KID F+ D+ T IV +I LA L VVAE VET Sbjct: 598 FGTGYSSLLYLKRLPINRVKIDRGFIWDMGTTPESRSIVDTILQLAHVLGLEVVAEGVET 657 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQP 726 QQ+ L G + QG+L RP+P Sbjct: 658 IQQRDQLIDAGCRVAQGFLWARPEP 682 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 101/675 (14%), Positives = 205/675 (30%), Gaps = 34/675 (5%) Query: 82 SFLQTAVMLGSQTFVVLCAC-----AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI 136 + + + + + Sbjct: 157 HRQLVLSAGPTVLYACGVDGQSLVPLWVSDNITRVLHFSPAECLAPDWWVSHVHDADRAH 216 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + L+ F + + D L + + + H Sbjct: 217 VLETWPRLLADGSLLQEYRFRDGQGVVRWLRDHKRLLFDANHQPLAVVGNWDDVTAGHAL 276 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTL 253 R ++ + GY Sbjct: 277 AERQRLHATALESTRDGVLIADLT------GRIISVNPAFSEMTGYTAAEAIGRNPRLLQ 330 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVR 310 R + + +++ + Y L+V+ L + Sbjct: 331 SGRHDRAFYQAMWASLTQAGHWQGELWNRRADGEIYPQWATLSVVKDEHGQPTHYLAVFT 390 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEF 362 + + A DPLT LPN L E+A Q + + +D + Sbjct: 391 DLSKLKHREEELEHLAHYDPLTDLPNRLLLRSLLQHALERAQRQGGKSAVLVINLDQFKN 450 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + + L ++ + + +L E + +L + + L Sbjct: 451 VNDSLGHALGDELLLGVTARLKARLRHEDVVGRLGADEFVAILEASQDAENAGSIAGDLL 510 Query: 423 SR---QIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + F + + LL ++ Sbjct: 511 AALAPPFVLADGHETYARASIGISVFPQDGKGANDLLRSADVAMHRAKQRGGNQ-YAFYT 569 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTP 535 + +++ + +R AL QG+L+L+ QP + G + +L + G++ P Sbjct: 570 GELGHGALQRLEMETALRRALIQGELVLHYQPKLDLASGVIVGGEALLRWQRPGFGLVPP 629 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRII 594 +F+PL + L V+ + + + +VN+ + + Sbjct: 630 YRFIPLAEETGLIVPIGAWVINETCRQIRAWAEAGQPSVMVAVNVSARQFAGGELEAVLA 689 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +++ + P+ + LE+TE + E + ++ L + G +A+DDFGTGY++ L R Sbjct: 690 TALRKHAVDPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYSSLSYLSR 749 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +KID F+ IV++ A I ++ LA +L VVAE VET+ Q + L K Sbjct: 750 FPVDELKIDRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQLSYLRKNRCD 809 Query: 715 YLQGYLIGRPQPLAD 729 +QGYL P P + Sbjct: 810 QIQGYLFSAPVPADE 824 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 120/680 (17%), Positives = 238/680 (35%), Gaps = 49/680 (7%) Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG---LVTPIGIKCSMYLVGSFFD 148 + A+ + +TS RL WLG + +GI ++ F Sbjct: 9 FWLVSLSVFIAVTAAYTSFSFASRITSTSGKIRLLWLGGGSVAMGVGIWSMHFIGMLAFR 68 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI--------------VSPH 194 P + + ++S F + ++ Sbjct: 69 MPFPVHYDVRTTLLSLLMAIVVSGFALRMTSLPRIGPANLLMAGTLMGLGIGAMHYTGMM 128 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 ++ P L +S A ++ L + + + + + Sbjct: 129 AMEMPMAIRYDPFLVFLSILIAVSASTAALRIVSTLRSDVAVADMPKKFLSALIMGAAIS 188 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRI--- 311 A + L + ++ LA + ++ L+ + Sbjct: 189 GMHYTGM------AAARFPLRMSGTPLKNSSDAWLAVTIGLASFMILAIGLILSLVDSHL 242 Query: 312 -------YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLR 356 + N + H AL D LT LPN LE +Q + L Sbjct: 243 ATRTAGLVGSLKAANEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDGAFSVFFLD 302 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G ++ + R L + + + ++ G E ++V + G++ Sbjct: 303 VDRFKPINDSLGHSTGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQKDPGKVHE 362 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + + L + F + T + LL + + Sbjct: 363 IARKIRDCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYAKSKGSGQ- 421 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + ++ ++ + N +R +++ + +LY QP E E + ++ + Sbjct: 422 IQFYSGELNDSAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEK 481 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNI 589 GI+ P F+P + L +++ + R +VNL L + +++ Sbjct: 482 GILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDL 541 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I+ + + P+ + LEITE + E +M + + + G +AIDDFGTGY+++ Sbjct: 542 MKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSF 601 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+ D +KID F+ DI N DA IVR+I L +L V+AE VE+Q Q +L Sbjct: 602 SYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLK 661 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + QG+ RP P + Sbjct: 662 AMECDAYQGFFNSRPLPPGE 681 Score = 94.3 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 36/329 (10%), Positives = 83/329 (25%), Gaps = 23/329 (6%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 ++ + I+++ F + + + S + + + ++ L G Sbjct: 45 LGGGSVAMGVGIWSMHFIGMLAFRMPFPVHYDVRTTLLSLLMAIVVSGFALRMTSLPRIG 104 Query: 61 WR--GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 + L G+ + + ++ + + F+V + I R T Sbjct: 105 PANLLMAGTLMGLGIGAMHYTGMMAMEMPMAIRYDPFLVFLSILIAVSASTAALRIVSTL 164 Query: 119 RYVWQRL-----FWLGLVTPIGIKCSMYLVGSFFDFPLKIS---------TFFGDADAIF 164 R F L+ I Y + FPL++S + + Sbjct: 165 RSDVAVADMPKKFLSALIMGAAISGMHYTGMAAARFPLRMSGTPLKNSSDAWLAVTIGLA 224 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA--FTLSWLAA 222 + + L L+ + L ++ S A R TL Sbjct: 225 SFMILAIGLILSLVDSHLATRTAGLVGSLKAANEKLH--YLALHDGLTRLPNRTLLEDRV 282 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + + I +LG + +S + Sbjct: 283 DQAIRHARGVDGAFSVFFLDVDRFKPINDSLGHSTGDKVLQQMARRLS--GTVGPEDTVA 340 Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRI 311 + E+ + F + +R Sbjct: 341 RIGGDEFVIVFPEQKDPGKVHEIARKIRD 369 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 109/560 (19%), Positives = 221/560 (39%), Gaps = 34/560 (6%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPV------FFIIF 251 K ++ + ++ + +L I GY ++ Sbjct: 536 AEKALSDKSRQMEAVVEGLLDGIITIDGRGKILTFNQAAQEIFGYTEDETLGKNISMLMG 595 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNY-NQNFLQGVETEYSLAFILAVLI-SFSVCLLYMV 309 + N + L+ + + + + + + V + +V Sbjct: 596 SPHREHHDSYLSNYIERGVSEITGRIRELEALRKDGSMFPIELGIVEVQMAGEVNFIGVV 655 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNLE 361 R + H A DPLTLLPN R L + + L +DN + Sbjct: 656 RDITERKQRENEIHQLAFYDPLTLLPNRRLLLDRLTEAINHSVRTRNFSALFFLDLDNFK 715 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GRLQH 416 ++ G + + L+ +++ + + +L G E +++ S E + + Sbjct: 716 NLNDSAGHNKGDLLLGQVAERLVNSVRQGDTVARLGGDEFVIIASDLSHEPTLAANQAER 775 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + +R+ + + + F+ + LL Q ++ Sbjct: 776 LAQKIVSNLTREYNLDGLTYNSSASIGVTLFNSENLPKEDLLKQADMAMYKAKYAGRN-G 834 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGG 531 + + + + + +++ + +A+ +L+ Q N + G + +L + + G Sbjct: 835 VQFFDPQMQVSVSSRASIVSDLYSAIQSQQFVLFYQKQVNHLKQCIGVEVLLRWIHPEKG 894 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNI 589 +++P +F+PL + L VLE LA +K+ +VN+ + + N Sbjct: 895 MVSPLQFIPLAEETGLIVPIGEWVLEEACATLAKWSLESEKQHLSIAVNISVVQFSKDNF 954 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ K +PQ + LEITE +N +++L + G +IDDFGTGY++ Sbjct: 955 VQTVLNALKTSGANPQLLKLEITETLLANNIPDVKAKMKELQQHGVTFSIDDFGTGYSSL 1014 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+L + +KID FV+DI+ ++ D I +++ LA + L V+AE VET+ Q+ALL Sbjct: 1015 SYLKQLPINQLKIDQGFVRDIINSSNDRAIAQAVITLADSIELQVIAEGVETEAQRALLQ 1074 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 +G QGYL G+P + + Sbjct: 1075 SMGCHTYQGYLYGKPCRIEE 1094 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 15/148 (10%), Positives = 34/148 (22%), Gaps = 13/148 (8%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + R + AQ RR + + ++ + F+ GY Sbjct: 269 VLVVIRNTSAQVEAQSEIRRLSEVARQTTNG---VVITDVKGRVIWI---NEAFSFLTGY 322 Query: 243 LVPVFFII----FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + G + A++ N + + Y + L Sbjct: 323 SIEEMQGKKPGELLQGEDTDPATVAIMRDALAQQNGFNVDVVNYSKAQNSYWVRIACNPL 382 Query: 299 ISFSV---CLLYMVRIYHRSEWLNRRWH 323 S S + + + + Sbjct: 383 FSESGSLSGYIAIETDITKEKQDEELIR 410 Score = 47.7 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 9/147 (6%), Positives = 27/147 (18%), Gaps = 16/147 (10%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPV 246 + ++D + + + L + + GY + Sbjct: 394 AIETDITKEKQDEELIRNSQNLLKAVIDANNIGTWHFNIQTGELIINDKWAALLGYTLSE 453 Query: 247 FFIIFTLGVGKLRYPFLNLT-------WAVSTLCLLNYNQNFLQGVETEYSL----AFIL 295 +L +P + + N + Sbjct: 454 LLPANRYTWERLTHPDDLAYCTTILEKHVSGLIPIYEANLRMKHKNGEWIWINTRGRISS 513 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRW 322 ++ LL + + Sbjct: 514 RTYDGKALWLLGTHFDINDQIIAEKAL 540 >UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GYS2_SHEPA Length = 1072 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 97/631 (15%), Positives = 226/631 (35%), Gaps = 35/631 (5%) Query: 126 FWLGLVTPIGIKCSMYLVG--SFFDFPLKISTFFGDADAIF--TVVDLLSLFTAVLIYNM 181 ++ L + +YLVG D + D + + ++L Sbjct: 427 LYISLFAGLLFFYIVYLVGRNIANDLIDSVRGIVDDVEKLAKDPSLELALEVKGKDELTQ 486 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + + +M+ ++ + A + + I G Sbjct: 487 IALAVNQMVSERMKSRRALHQASAVFRHSAEGIIVTDANN------HIELVNPAFTKITG 540 Query: 242 YLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + + L ++S+ + Y + + Sbjct: 541 YTLDDVKGKSPSILSSAHHQEDFYQQLWRSLSSKNSWEGEIWNKRKGGKIYPEYLKITAV 600 Query: 299 IS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE-------- 347 + ++ + + ++ + + D LT LPN +Q Sbjct: 601 KNSKNKTIQHIGLFLDISNNKQYEQDIWYKTNFDSLTKLPNRHLFSSRLQQAIDSAHNTN 660 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + + +D +F++ +G ++ L ++ ++ + ++ G E +++ Sbjct: 661 SQVAIFFIDLDRFKFINELHGHAAGNKVLKQSATRLEAVLGPDDSIARIGGDEFVVISPQ 720 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 G + + L ++ ++N + + + + ++ LL Q Sbjct: 721 TGNVG-AEQLAQKLSDTLAKPYLFDNKETIISSSFGIAFYPEDGQDIEMLLHNSETAMYQ 779 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + ++ + +++ L +R A+ Q + L QP+ + E + Sbjct: 780 AKRDGRAH-YQYFSPEMNVEMLERMHLEQRLRKAVKQSEFYLEYQPVIDMHSGEVTSVEA 838 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 ++ D G+++P F+P+ + L +L+ L LA + ++N+ Sbjct: 839 LVRWQDPDYGVISPQAFIPIAEEAGLIEPLGEWILQQALSDLAQWHAQGLMLKMAINVSA 898 Query: 582 LTL---LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + + ++ I+ + + +EITE + + +E + + G I Sbjct: 899 RQCIHSRDISFFDILKQTLAKHDIAAENLHIEITESMLIEDKPQCLQTLESIKQLGVDIY 958 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY+ L + +IKID F+ + + N DA ++++I +A++ + +VAE Sbjct: 959 LDDFGTGYSALSYLTQCPISVIKIDKSFIDNALDNPSDAKLIKAIVMMAQSLEMPLVAEG 1018 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET +Q L LG Y QGYL+ +P A+ Sbjct: 1019 VETVEQWHFLRNLGCDYAQGYLMSKPLAKAE 1049 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 104/563 (18%), Positives = 203/563 (36%), Gaps = 33/563 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 +R E R + + L T + V + Sbjct: 122 TDITARKRAEETLQVSETRLALAQDAGSDGLWDCDLTTGEAWSSDRWWGVLGYEPGELAS 181 Query: 255 VGKLRYPFLNLTWAVS-----------TLCLLNYNQNFLQGVETEYSLA----FILAVLI 299 + L+ A + + + + + Sbjct: 182 HARTWRALLHPEDAGAAERALVEHLSGRAPTYASEHRMRRKDGSWAWMMTRGKVVARAAD 241 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKS 351 ++ + + + A D LT LPN + E + Sbjct: 242 GRALRFIGTQIDITARKAAEGQVAHMARHDGLTDLPNRALFYERLEIRLADLHLNGGACA 301 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 CL +D + ++ G +R++ + +++ ++ + +L G E ++++ + Sbjct: 302 VLCLDLDRFKTVNDSLGHAAGDFLLRAVAHRIRAVLRADDMVARLGGDEFAVLVADADDP 361 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 R + + L + I + L +G + + + L + ++ Sbjct: 362 ARAETLAARLIAAVQAPIPFGKRRLKVGLSVGIAQAPSHGFDSETLFRRADLALHRAKTE 421 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 E + + L +R A++ +L+LY QP + G++ ++ Sbjct: 422 GRN-THRVFEPAMDEAEAARRDLERDLRQAIEGDELILYYQPQVSTGTGRLLGFEALVRW 480 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 G++ P+ F+PL + L VL + + A + +VNL P Sbjct: 481 EHPTRGLVPPNAFIPLAEESGLILPLGEWVLRAACREAARWA---HPLKVAVNLSPRQFQ 537 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q ++ R++ + ++P + LEITE ++ ++ + +L FG IA+DDFGTG Sbjct: 538 QADLPERVLAILTETGLAPTRLELEITETLIINDMARALGILRRLKAFGVSIAMDDFGTG 597 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L+ D IKID FV + + A+IVR++ L ++ +SVVAE VET Q Sbjct: 598 YSSLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDAQM 657 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L QGYLI +PQP+ Sbjct: 658 RFLAAEACDEAQGYLISKPQPIE 680 >UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HUB1_LYSSC Length = 581 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 90/540 (16%), Positives = 196/540 (36%), Gaps = 28/540 (5%) Query: 217 LSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + + +++ +F+ GY +L + Sbjct: 27 IFENVSEGIMITDEYKKIVMVNPAFEFVTGYKRDDVVGKTPAVLQSGVHELPFYLEMWEQ 86 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + Y + + + + + + Sbjct: 87 IRQEGIWQGEIWNRRKTGDVYPEWLTIVCVTNDEGKVTNYCGIFTDLSERKIVENELEKR 146 Query: 326 ALTDPLTLLPNFRALEQAPE----------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 LTD LT + N A + + + L +D + ++ G + Sbjct: 147 LLTDSLTEVSNRFAYIERMDNLLESTSAISHSVQHAVYFLDLDRFKQINDTLGHAVGDSI 206 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTG 432 + + + L L++ + + + G E ++ L+ + + S + + N Sbjct: 207 LIEVAKRLKQLLKNKDIIARYGGDEFVITLTNVKNVKEAAKFAEQIISNIEKPMMINGQE 266 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + + + L+ S + + + + +LL Sbjct: 267 VFISTSIGVSVYPVDGRNTEELINCADRAMTYSKKNGLN-GYSFYFDELQTDAQRVLLLD 325 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 + +R A+D + L+ QP N++ +G + ++ G ++P +F+P + L Sbjct: 326 SELRRAIDNREFELHFQPKICMDNEQIQGLEALVRWNNERLGFVSPGEFIPYAEETGLII 385 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 +LE + + ++N+ + Q N I + +RY++ + Sbjct: 386 PLSEVILEKACEAVIQMQKYGWKIPVAINISSIHFKQHNFLDSIQTILERYNMPANNFEI 445 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE ++A ++ + +L + GF+I+IDDFGTGY++ L R D +KID F++ Sbjct: 446 EVTERTVMNSANETVSKLVRLKQLGFKISIDDFGTGYSSLSYLVRFPLDCLKIDRSFIQH 505 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I + +V +I ++ + VVAE VE QQ +L K+ +QGY +P PL D Sbjct: 506 IGSLDEKQAVVDAIIQMSHRLKMKVVAEGVEQAQQVDILRKMNCDIIQGYYYSKPLPLND 565 >UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=Q12L20_SHEDO Length = 1047 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 96/566 (16%), Positives = 193/566 (34%), Gaps = 35/566 (6%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFF 248 H +R ++ ++ + I G+ Sbjct: 468 HTDITDLKRAEESLSIAASVYR----NSSEAMCVFDYQGKIVNTNPAFSEITGFDADEVI 523 Query: 249 IIFTLG---VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC- 304 + + L L + +F + Y+ + + C Sbjct: 524 GQHLAVLQKEEQAEHFNLQLEQYLFEKRYWQGELSFQRKNGQTYTAWVTINAIGELDTCD 583 Query: 305 --LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + + + LQA D LT LPN R L + G + Sbjct: 584 TLNVMLFADVSEKKQAEELIWLQANYDTLTGLPNRRMLLEYIKLQIANCTRDNQGFALLF 643 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G M + + + +++ + + ++ G E +VL+ + Sbjct: 644 LDLDFFKEVNDSLGHDMGDSLLVEASQRIKACIRDADLVARIGGDEFTIVLTDFTGPKGV 703 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + N + S + + + + T+ LL + AH Sbjct: 704 ERVTNKILKQLSEPFMLGSEMAYISGSIGITLYPDDALTIDGLLKNADQAMYSAKAHGRN 763 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN------KEGEGYDEILAR 525 + + +++ L+ ++TA+ + LY QPI + + ++ Sbjct: 764 K-FNYFTPKMQETALRRMKLIQDLKTAIKMEEFELYYQPIIDFSANASDNITKAEALIRW 822 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL 584 G ++P F+P+ + V + A + S+N P+ Sbjct: 823 HHPKLGFISPVDFIPIAEDTGMIVEIGNWVFRQACRQAAQWKQTYGLDIQISINKSPVQF 882 Query: 585 LQKNI-AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + ++SP ++ +EITE + G +I++DDFG Sbjct: 883 RDERSSVTSWTQYMSELNLSPASICVEITEGLLLETESGVGAKLAAFRDAGMQISLDDFG 942 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+ D +KID FV ++ NT D + +I ++ + V+AE +ET+ Sbjct: 943 TGYSSLSYLKKFDIDYLKIDKSFVSNLEDNTNDLSLCEAIIVMSHKLGIKVIAEGIETEL 1002 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+A+L G Y QGYL +P D Sbjct: 1003 QRAMLECAGCDYGQGYLFSKPVKAED 1028 Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 17/194 (8%), Positives = 55/194 (28%), Gaps = 15/194 (7%) Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 S+F+ LK + D F D ++T + + + + ++++ ++ Sbjct: 288 LSYFNRMLKGEISEYEIDKRFIAKDGAIVYTHLTVACRFYDNGSMLVIAGFLDITKLKQA 347 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFF----IIFTLG 254 A +++ + + L + + T + I G + + + F Sbjct: 348 EAALQNSKEQLALVLDSSDLGIWDWHINTNEVASNLRSAQIIGCELALLNQKPSLWFKAI 407 Query: 255 VGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYSLAFILAVLI----SFSVCLLYM 308 + + R + A+ +++ + V+ + + Sbjct: 408 IAEDRKRLIKSLLAIRKGQSIHHKIEYRIRSLNGDIRWILDTGKVVEVADTGQPLRMCGT 467 Query: 309 VRIYHRSEWLNRRW 322 + Sbjct: 468 HTDITDLKRAEESL 481 Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 28/340 (8%), Positives = 74/340 (21%), Gaps = 42/340 (12%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVL---------- 68 + + + SY + + + +L G + + Sbjct: 20 VMMLAYFLCLIPRNDQQKHAPSYQIVIGVLAAFGVMLLIEHGIMYGLGLPSNESVFQDLN 79 Query: 69 --------CGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSR- 119 S + L + + + + Sbjct: 80 QTYSSDSELTGLFFASSALIASLVGLYFGRYVLLVAALVLSPYVIYLTDFPIISLILALG 139 Query: 120 ---YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 + + IK + + + +ST AD V+ L SL+ V Sbjct: 140 LSGVLGALFRRYTVEHLGTIKLAKLYLFGLVVQIVFLSTSMLTADNWRHVIHLNSLYLLV 199 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LC 231 ++ M F R++ L ++ + + + + L Sbjct: 200 FFPLIMLAAANLMSKYIFF-----ERNMQIRLQEDFLFKNQFDIGNIGIAITSKAKYWLK 254 Query: 232 TPYENDFIAGYLVPVF------FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + Y + + K F + + ++ F+ Sbjct: 255 VNPCICKMLKYSEKELTRMTWKELTHPEDLEKDLSYFNRMLK--GEISEYEIDKRFIAKD 312 Query: 286 ETEYSLAFILAVLISFSVCLLYM--VRIYHRSEWLNRRWH 323 +A + +L + + + Sbjct: 313 GAIVYTHLTVACRFYDNGSMLVIAGFLDITKLKQAEAALQ 352 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 116/600 (19%), Positives = 210/600 (35%), Gaps = 40/600 (6%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 S F A I +L R ++ A + ++ A +W L Sbjct: 54 AYEAGASDFLAKPIDWVLLPRRIRYLLRAKLAFDELHKSRTMLYNAQRIARLGNWEFDLE 113 Query: 225 VLLLL------LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + + + + ++ + A T + Sbjct: 114 TNVFTCSEESCRIFGIRDHRQGKSHRALMRRVHPEDRVTVK---KAIFQAFRTGVGYCMD 170 Query: 279 QNFLQGVETEYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + E ++ + + L+ V R A D LT LP Sbjct: 171 HRIVLDDGVERIVSQHAELLSADDGRTSRLVGTVHDITERTLAEERIRYLAHHDTLTALP 230 Query: 336 NFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N E+ EQ + L +D+ + ++ G ++ L+ + Sbjct: 231 NRFQFEERMEQALAFAQRNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAGRLMKCL 290 Query: 388 QENEKL------------YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 + ++ L ++ G E ++L+ + + S++ Sbjct: 291 RRSDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGGHE 350 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + +G F + E LL + ++ +++ L Sbjct: 351 VFVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRN-TYQYYSGSMNAMALERLTLE 409 Query: 493 NTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R AL + + L QP + G + +L+ + ++ PD F+PL + L A Sbjct: 410 NNLRWALKRNEFRLCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGLIA 469 Query: 550 RFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VL + T + R +VNL L + +A + ++ + + P + Sbjct: 470 SIGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSHLE 529 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE SN E + I L K G R ++DDFGTGY++ RL R D +KID FV+ Sbjct: 530 LEITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSFVR 589 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DI + A + +I +A+ L+V+AE VET +Q A L G +QG+L +P Sbjct: 590 DISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLNPD 649 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 98/428 (22%), Positives = 184/428 (42%), Gaps = 17/428 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 + H A D LT LPN + + + L +D + ++ G Sbjct: 1045 RAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLG 1104 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + +++ ++ ++ N+ + +L G E ++L E+ + + S+ Sbjct: 1105 HEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKV 1164 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 ++ + + + G+ E + L+ ++ + E+ + Sbjct: 1165 FAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKEQG--NSYQFYEKGMETAA 1222 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 K++ L +R AL+Q +L LY QP N E + ++ + G++ P +F+PL Sbjct: 1223 VKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLA 1282 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L A +L + + +VN+ L ++++ +I+ + K Sbjct: 1283 EETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETG 1342 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + LEITE A +++ +L + G + AIDDFGTGY++ LK DI+K Sbjct: 1343 LPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVDILK 1402 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ D+V+N DA I++ I LA + L VVAE VETQ Q+ L QG+ + Sbjct: 1403 IDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYL 1462 Query: 722 GRPQPLAD 729 P A+ Sbjct: 1463 SEPLSAAE 1470 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 104/476 (21%), Positives = 195/476 (40%), Gaps = 33/476 (6%) Query: 286 ETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLN--------------RRWHLQALT 328 L A + V R + + QA Sbjct: 109 GELLYLEVYKAPFYDEDGKTIGTVGAGRDITNLKKTQLDLEKNLKILDEQREQLEYQANH 168 Query: 329 DPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN +Q + + + +D+ + ++ G + + + Sbjct: 169 DSLTDLPNRVLFMDRLQQSINIAQRYDNKVALLFIDLDHFKEINDSLGHGVGDKVLIEVS 228 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGY 437 R + M++++ L +L G E ++L+ + ++ + N L +G Sbjct: 229 RRMKNQMRKSDTLSRLGGDEFCIILNDIIDIEDMSDIITSGMEALKEPMEINGHTLYVGM 288 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + + LL ++ +E ++ + ++V L +R Sbjct: 289 SIGVSVYPNDGNSASSLLKNADAAMYKAKGDGRN-TYCFYDEAMTERAFERVFLETALRK 347 Query: 498 ALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ +L++Y QP + G + ++ G + PDKF+PL + + D Sbjct: 348 ALEEDELVVYFQPQIDARENKLVGMEALVRWEHPIMGFIYPDKFIPLAEITGMIVQLDRL 407 Query: 555 VLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 V++ L P + ++NL + + + I + S + + E+TE Sbjct: 408 VMKKALTQFKKWDKAGLNPGKLALNLAIKQIEENDFIEFIENILDCEDCSYKNIEFELTE 467 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 Q +N E+S+ +++L G IAIDDFGTGY++ LKRL D +KID F+KD+ + Sbjct: 468 NQIMNNPEASIETLQKLSDLGISIAIDDFGTGYSSLAYLKRLPIDKLKIDRSFIKDLPQD 527 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA I ++I L + +L V+AE VET++Q+ + + G Q++QGY RP + D Sbjct: 528 ADDAAITKTIISLCSSLNLKVIAEGVETEKQKNFILQNGCQFIQGYYYSRPLSIED 583 >UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPW4_9GAMM Length = 837 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 100/619 (16%), Positives = 213/619 (34%), Gaps = 21/619 (3%) Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 I + + F + + ++ N+ Y+ R+ Sbjct: 207 FSAGELITVESSISLYNARRTFRQHGFHHLGVKNHDEQVIGLVSYGDILRNVEMDYVYRL 266 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-CTPYENDFIAGYLVPVFF 248 H +K ++ L + I GY Sbjct: 267 KELLHERDRALALSQHNLKLADKVIEASMEAIVVTDLQARIQRVNPAFTEITGYEEWEVL 326 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC- 304 + + ++ + T Y + + + Sbjct: 327 GKNPNLLSSGRHDALFYQKMWASLQETGTWQGEIWNKRKDGTIYPEWLTITAVEDEAGQI 386 Query: 305 --LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + + R A D LT LPN + E + Sbjct: 387 CQYASIFSDLTEIKKSEARIKRLAYFDELTRLPNRKLFNDRLHLSLGYAQEHGHKAALAF 446 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ +GL +R + R + ++ E + + + G ++L+ E + + Sbjct: 447 LDLDFFQRVNDRFGLDAGDQVLREVGRRIENVLCEGDTVARFGGDSFNMILTDVEDDQAV 506 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + L + I + +++ F + + L +Q+ Sbjct: 507 SEYLTRLLEVVNQPIMVAGSDINLTVSIGVSFFPSDATDAEDLFQCAEAAVKQAKDFGRN 566 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYD 529 + + + + A++ LY QP + + G + ++ + Sbjct: 567 -SYRFFSSEQHRLVQSRYRMSGDLHRAIETDQFQLYYQPKVDLQRQTVGAEALIRWSHPE 625 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G + P +F+PL + VL ++ + ++N+ + ++++ Sbjct: 626 LGFIPPGEFIPLAEDLGFIDQIGHYVLCEAVRQAKEWYDQGLSVQVAINVSAKQMQRRDM 685 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 A ++++ ++Y P + +E+TE + + I++L G IAIDDFGTG+++ Sbjct: 686 AEEVLQVVEQYSCPPHLLAVELTETSFLHCLDETRATIKKLRDAGISIAIDDFGTGFSSL 745 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 ++ + D++KID F+ +I + +D IV SI ++++A L VVAE +ET+ Q A+L Sbjct: 746 SYIRNIDMDVLKIDRSFLINIENSDVDRTIVSSIIEMSQAMGLQVVAEGIETETQFAMLK 805 Query: 710 KLGVQYLQGYLIGRPQPLA 728 L +QGYLI RP P Sbjct: 806 ALNCDQIQGYLIARPMPAE 824 >UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAW8_ALHEH Length = 1051 Score = 665 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 102/694 (14%), Positives = 224/694 (32%), Gaps = 37/694 (5%) Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 ++++ + V A + + R + Sbjct: 342 VVVRYGRLDMAWIGLVDQASGRVTPVSRAGRDMGYLDEIRISTDPARPESRGPVGRAIRQ 401 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + + + + A F + A+ +Y+ + + I+ Sbjct: 402 RRASVFDRFLDHPDAGPWQAAAARRGFRSVAAFPLFQSDDCIGALAVYSSEERFFSADII 461 Query: 192 SPHFAQI----------LWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEN 236 + + + + A + + ++++ ++ Sbjct: 462 QLMAEMTGDLSFALDNIEREQARKAAEEQMRLAEEVFEHSTEAIIITDARQRIMRVNRAF 521 Query: 237 DFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 GY+ + + + + + L Sbjct: 522 TERTGYVPDEVLGRRPHMLRSPHHTQQFYRRILARLRRHGFWEGEIWNRRKGGENAPLWL 581 Query: 294 ILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 L+V+ + + + ++ A DP+T LPN L Sbjct: 582 TLSVVRDEAGRITHYIAVGLDLTETKDREAHIRYLAQHDPVTGLPNRGLLADRLGQALRR 641 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 +Q + L +D + ++ G + ++++ + L + + ++ + L Sbjct: 642 AQDQHYRLALLSLDLDRFKIINETLGHVAGDEVLQTVAQRLQDHVNGAGTVSRIGSDQFL 701 Query: 403 LVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L L + + + L + + + L+ L Sbjct: 702 ILLPEIHKPTEAAQAAERLMACVAEPLDLSGQELTPSSVVGIALYPEDGDNLETLHSHAD 761 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 + ++ + +++ L + +R ALD+G+ L+ QP + Sbjct: 762 AAMSMAKQASGHEGYRFFSSDMTSRARERLSLESRLRRALDRGEFRLHYQPQVSLADGTL 821 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRF 575 G + +L D G ++P +F+P+ + L VL + Sbjct: 822 TGMEALLRWHAGDEGDISPARFIPIAEETGLIVPLGRWVLGEACRQNRAWRQAGLPALPV 881 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF-SNAESSMYNIEQLHKFG 634 SVNL + L + ++ + R + + + LE+TE + + + + L + G Sbjct: 882 SVNLSVVQLRRSDVVADVRRALETSGLPGDGLHLEVTESLFLSEDDPAVVTGFQTLREMG 941 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +AIDDFGTGY+N LKRL +KID FV+ I + D I ++I +A++ L V Sbjct: 942 ISLAIDDFGTGYSNLGYLKRLPIAKLKIDQSFVRGIGDSGHDTAINQAIISIARSLGLGV 1001 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AE VET + +L LG +QG+ RP Sbjct: 1002 IAEGVETAAELRVLQALGCDEIQGFYYSRPLDAE 1035 Score = 66.1 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 32/311 (10%), Positives = 72/311 (23%), Gaps = 18/311 (5%) Query: 33 PLAIIHSSYIFLAWMPLCVMLSILFIFGW-RGVVPVLCGMFCTNLWNFHLSFLQTAVMLG 91 P L L +L+IFG R ++ ++ + V G Sbjct: 2 PALRKPGHGPALTICLAYAALGLLWIFGSDRLLLVLIEDTELVARLQTAKGWFYVLVTAG 61 Query: 92 SQTFVVLCACAILRWQLGTRWRYGL-TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFP 150 V+ R + R + +W+ + G+ + +G F Sbjct: 62 LLYLVIRFTINTTRLEEQARRPRAPDSDLLPVAGDYWVPVGILTGLAGGLAALGYLFYHQ 121 Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI----AP 206 + + I + +L+ + H + R A Sbjct: 122 VSSTPTPPPEADIRHLARWSFTTGLLLVVAAGTGIILWWRGHVHGLEARRLRTELMAQAD 181 Query: 207 SLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFT----LGVGK 257 +E+ TL+ + ++ L L + G + Sbjct: 182 LAARERAYETLAENSPDIIVRLDRDLRHLYVNRALEAFTGIPREHYLGRTHEEVGFRGKL 241 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHR 314 L +L A+ + + ++ + +L + Sbjct: 242 LATWERHLNQALESGEPGTMTFSHPDREGRVRHFEALIVPETDDTGNIAHVLCISHDVTG 301 Query: 315 SEWLNRRWHLQ 325 Sbjct: 302 HVQAREEISRL 312 >UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850699 Length = 676 Score = 665 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 109/556 (19%), Positives = 201/556 (36%), Gaps = 22/556 (3%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVF-- 247 ++ ++ +E +L ++V+ + + GY Sbjct: 108 LSEETLQKQYDQLKEREIWYHSLFENNPVAVITFDHRGNIKHTNPKIFELTGYQEDYVVE 167 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV--LISFSVCL 305 K N+ + ++ + + V + Sbjct: 168 HSFKPYVHHKDHPIIYKEFKKALVGVGSNFELRLIHQDGRILQTMIVMVPVLIENKVVGV 227 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA-----PEQEAGKSFCCLRIDNL 360 +V S+ ++ H A D LT LPN R EQ Q + L ++ Sbjct: 228 HCLVTDITTSKEAEKKIHHMAYHDDLTGLPNRRYFEQITAEIIKRQPMKMAILLLDLNRF 287 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + I R + + + + ++ G E +L+L + + H+ N Sbjct: 288 KVVNDTLGHAAGDQLLIEIARRIDDKIGVQDHVARMSGDEFILLLPTIRGKADVFHIANH 347 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + I N+ + + + E L LL + Sbjct: 348 IHKSLEQPILINDHEIITSTSIGVAMYPDHGEDLTTLLKTADVAMYTAKKKGAAQTF-FY 406 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMT 534 + + + L IR+A+ D L+Y QP N G + ++ GI++ Sbjct: 407 SNSLHAKEINPIQLEEDIRSAIKHEDFLIYYQPKFSTINGRMIGVEALVRWKHRHKGIIS 466 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRI 593 P F+PL + L VL + L SVN+ + + Sbjct: 467 PGHFIPLAEETGLIIPLGAHVLRKVCLKLKEWESRGHKDIIVSVNVSSRQFHDDHFLQTV 526 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + ++P+ + LEITE A + +++L + G I IDDFG Y++ LK Sbjct: 527 RDILIETGVNPRQIELEITESTAMEQVYRAERILKELSELGITITIDDFGIEYSSLNYLK 586 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D +K+D F+++++TN + IVR+I +A L +VAE VET++Q L G Sbjct: 587 KFAVDTLKVDKSFIRELLTNESNQAIVRAIIVMATHLQLDLVAEGVETEEQLKWLQMNGC 646 Query: 714 QYLQGYLIGRPQPLAD 729 QY+QGY RP P + Sbjct: 647 QYVQGYYFSRPIPCEE 662 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 116/656 (17%), Positives = 223/656 (33%), Gaps = 28/656 (4%) Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM--YLVGSFFDFPLKIST 155 L G + F + + + + Sbjct: 167 LLDAIFAATDDGILSLAAVRDANHRPVDFQIVHLNQGAARLLGQPAAALQWSQLRGGAHL 226 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 + + + L + L+ + L D+ +E Sbjct: 227 LCTAEVIDWLLQRVGGGDREELEIDSDDRNLSLSATAFEDMLSLTISDVTSLKRREASFR 286 Query: 216 TLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFFI--IFTLGVGKLRYPFLNLTW 267 L + + + L G+ F + + R L+ Sbjct: 287 LLFDNNPMPMWVFDAATTRFLKVNDAAVRHYGFSRSAFLGMKLPEIWPADEREAHLHALQ 346 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 L + N L+ +E + + S L + R A Sbjct: 347 QAGDNYLSDRNWRHLKADGSEIEIIAFGRRVAFERSDGFLVAIVDVTERRKAEARIAHMA 406 Query: 327 LTDPLTLLPNFRALEQAPEQEA-------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN ++ + + C+ +D + ++ +G + ++ + Sbjct: 407 HHDGLTNLPNRSFYQERLQHALEARPAECHVAVLCVDLDLFKNVNDSFGHPVGDRLLQLV 466 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMG 436 L ++ + +L G E +VL + + R + + +G Sbjct: 467 AERLRLEVRGANMVARLGGDEFAIVLVSVVSPNEASDFAARVIERLSVPYDVDGLEVVIG 526 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 G+ + + LL ++ E+ + Q K+ + +R Sbjct: 527 ASIGIALSPGDGDNGEDLLRNADMALYRAKESGGG-NHHFFEKEMDRQAQKRRDMEIDLR 585 Query: 497 TALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 A +G LY QP+ + G++ +L + G+++P F+P+ L Sbjct: 586 YAFAKGQFELYYQPLVDVARDRVAGFEALLRWRHPERGMISPADFIPVAEDIGLIVGLGE 645 Query: 554 QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL AT P + + +VNL P+ +N+ +I + +SP+ + LEITE Sbjct: 646 WVLRQACAEAATWPSE---IKIAVNLSPVQFRSRNLVQAVIGALAQSGLSPRRLELEITE 702 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + E+++ + Q+ G RI++DDFGTGY++ L+ D IKID FV+D+ Sbjct: 703 SVFLAETEANLATLHQMRDLGVRISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVQDLAQR 762 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I L ++ +++ AE VETQ Q L + G +QG+L +P + Sbjct: 763 PDCLAIVRAIAGLGRSLNITTTAEGVETQAQLDWLREEGCNEVQGFLFSPARPAGE 818 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 97/588 (16%), Positives = 203/588 (34%), Gaps = 28/588 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 I ++ + I + R L A Sbjct: 228 IIWAKLTCTVMREADGQQPFTVTVVEDITERKRLEDNMRLAATVFENS---GDGLFVTDA 284 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 + ++ I G+ F+ L + Sbjct: 285 ENRIIH---VNPAFTRITGFTADEVLGRNPRLLASGRHDHDFFIQLWTVLLRDGKWQGEI 341 Query: 280 NFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + ++ +AV+ + ++ + + R A DPLT LPN Sbjct: 342 WDRRKDGEMFAGWQNIAVVRDTDGKVQNFVAVISDITTRKQVEERLSYAANHDPLTRLPN 401 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 ++ + + +D + ++ G + ++ + L ++ Sbjct: 402 RTLFQERLTRAIARASRNHNLVALLFIDLDRFKQVNDTMGHLAGDMLLQQVAERLSSCIR 461 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFD 445 + + + +L G E ++L + + + L + + + Sbjct: 462 QGDTVARLSGDEFTIILEDVQDPRDAAVVGHKVLRLLQEPVALTGGEAHISSSIGVSLYP 521 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + Q LL ++ E V+ + +++ L N +R A+DQG L Sbjct: 522 TDAGDPQTLLKLADAAMYRAKHLGRNSC-QFHSEAVNAEAFERLALENALRGAVDQGQFL 580 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ QPI + + +L + G++ P++FL L + + V + + Sbjct: 581 LHYQPIFDVKSGRAVAVEALLRWRHPEVGVVAPNQFLALAEETGMIVPIGRWVFDQACRQ 640 Query: 563 LATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 R +NL P L Q ++ + + + PQA++LE+ E A Sbjct: 641 AKLWRDAGHVDLRLHINLSPRQLRQPDLIEMVAAALEVSQLPPQALVLEVMETCVIDKAF 700 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + G +AID+FG+GY+++ L+RL I+K+ FV+++ ++ ++ IV Sbjct: 701 DPSALFARFAALGVGLAIDEFGSGYSSFAFLRRLPVTILKVAQSFVRNLSSSEDESEIVT 760 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I LA+ ++VVA +E + Q L G +QG+L+ +P P + Sbjct: 761 AIVALARGLHMTVVAPGIENKAQLDFLTGFGCDKVQGFLLSKPLPGTE 808 Score = 71.1 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/244 (10%), Positives = 47/244 (19%), Gaps = 18/244 (7%) Query: 102 AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY---LVGSFFDFPLKISTFFG 158 L + + +R + + + D Sbjct: 27 LYLLEDITSPFRVLKAELLSAALGLLDANIIDVVLLDLSLPDSFGMDTLDRLRAAHPLVP 86 Query: 159 DADAIFT---VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 T + L +L Y + ++ F I + E R Sbjct: 87 VVVLTGTNDEALALQALRQGAQDYLVKGQGDGNLVRRAIFYAIERSHAASALKRSEGRFR 146 Query: 216 TLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFI-IFTLGVGKLRYPFLNLTWAV 269 L A L V+L + GY F + A Sbjct: 147 ALFANAGLGVVLADAHGRMVEANPAFLSMVGYGEVELRGEKFRDITHPDDIGLNDTLRAE 206 Query: 270 STLCL---LNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWH 323 + ++ V+ + +V + L Sbjct: 207 VLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQPFTVTVVEDITERKRLEDNMR 266 Query: 324 LQAL 327 L A Sbjct: 267 LAAT 270 >UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYS6_METML Length = 934 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 116/641 (18%), Positives = 225/641 (35%), Gaps = 32/641 (4%) Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 +R V W + I + + ++ + L ++ GD VV + L Sbjct: 278 ARAVSLANAWFVVFAGILLGTLLIVIILWQLRRLILNPIGGDPALAIDVV--KRIAAGDL 335 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL-----L 229 + L ++ S + R I +R + A + + + Sbjct: 336 AQDGLNAKPDTLMASVLEMRQKLRESIDTLRQNAERMRLSASVFDHAHDGIFITDPHANI 395 Query: 230 LCTPYENDFIAGYLV---PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + Y I GY V L + + Sbjct: 396 VEVNYAFTQITGYTRNGALGRIPQELGFVTYDDSLLDVLWLQAESNSEWRGETWCRRKNG 455 Query: 287 TEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y+ + + + + + +++ + A DPLT LPN L Sbjct: 456 DVYAAWLDIFCVRDEANQVKNFVGLFSDITQAKEQQQNLERMAYHDPLTQLPNRALLSDR 515 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +Q + CCL +D + ++ G + + + + +++++ + + Sbjct: 516 LQQALARAERSGELLAVCCLDLDGFKPVNDTLGHEAGDYLLVQLAVRMSACLRDSDTVAR 575 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E ++L G ++ + L S + + + + F + Sbjct: 576 LGGDEFAVLLCGLQSIDECTQTLERLLSVIKTPYSIGDKSVTVSSSIGYTIFPDDGCEPD 635 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL Q+ + + + Q + AL + LY QP Sbjct: 636 TLLRHADHAMYQAKLNGGSR-VQQFDSHHDRQFRGLRQDRERVEAALSNQEFRLYYQPKV 694 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + + G + ++ + G+ +P FLP++ + S V+ L + Sbjct: 695 DLRQGKVVGMEALIRWEHPELGLRSPATFLPIVENTDFSIPLGEWVISEALGQIRVWQAA 754 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIE 628 + SVN+ ++Q N R++ L + ++P + LEITE A + I Sbjct: 755 GLDFQVSVNIAARHIVQSNFTERLVLLLAEFPEVAPHKIELEITETAAIEDVSGVANTIN 814 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 + G A+DDFG GY++ L+RL + IKID FV+D++ + D +V + L++ Sbjct: 815 TCKQLGVSFALDDFGVGYSSLTYLRRLPVETIKIDQSFVRDMLQDVDDLAVVAGVISLSR 874 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE VE +Q L ++G +QGY + RP P + Sbjct: 875 DFKRKVVAEGVENSEQGLWLLRMGCSVVQGYGVARPMPADE 915 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 103/580 (17%), Positives = 205/580 (35%), Gaps = 41/580 (7%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND-FIAGYLVPVFF 248 +V + + + L + + ++ T + + + + Sbjct: 116 VVKRALQERHILHEKQQVEEQLHLERDLLHNVIDGLEMQVMITDRDFNIQVLNWQAQKLV 175 Query: 249 IIFTLGVGKLRYPFLN--------------LTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + Y + A++ QN+ S+ Sbjct: 176 PVGQSATEMTCYQLTRGFDSPCSEHGMECPIETALAKNRATKVQQNYQDENGENVSVEKT 235 Query: 295 LAVLI---SFSVCLLYMVRIYHRSEWL-------NRRWHLQALTDPLTLLPNFRALEQAP 344 +L + R + + D LT LP Sbjct: 236 ATLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHYDTLTGLPQRDFFFDLL 295 Query: 345 E--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + L +D + ++ G + ++ + + L ++ + L ++ Sbjct: 296 HSHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVAQRLQNNIRITDNLSRM 355 Query: 397 PGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E L+ L + + + + S + + + F G+ + + Sbjct: 356 SGDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEK 415 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL ++ A + ++ + + L +R A++Q L L+ QP + Sbjct: 416 LLSCADSAMYRAKESGRD-AFRFYKPHMNEKAQGLLWLETELRLAIEQEQLELHYQPQYD 474 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + ++ + G++ P +F+P + +L VL + + +A Sbjct: 475 LNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMG 534 Query: 571 K-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 R +VN+ + + ++A + +L Y + + LEITE + E++ + + Sbjct: 535 ISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNK 594 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G +++IDDFGTGY++ LKR +KID F+ D+ N DA I SI LA Sbjct: 595 LTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAGH 654 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET +Q + L + QY QGYL RP P D Sbjct: 655 MGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKD 694 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 112/620 (18%), Positives = 206/620 (33%), Gaps = 65/620 (10%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 L ++ I AQ + A K+ + Sbjct: 128 WAHLTGRLINPRDSREGSIWIIDDIDEQKRAQAQLQ---AALWEKQVLFDSAMVGIVFLQ 184 Query: 226 LLLLLCTPYENDFIAGYLVPVFF----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + + I GY + L + + Sbjct: 185 ERRMTRCNRHFEQILGYGPGELAGSSSRRWYLSDEDWHEAGVRCYAPLVQGQAFEGQMVL 244 Query: 282 LQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRS------------------------ 315 + + + +++V Sbjct: 245 RTRDGRAIECEVRSKAVDPSNVAQGSIWIVMDVSERLRIQRQLAGMHGELEQQVRDRTRE 304 Query: 316 ---------------EWLNRRWHLQALTDPLTLLPNFRALEQA----PEQEA----GKSF 352 + R + A D LT LPN L + Q + Sbjct: 305 LQETVGNLHREIQDRQRDQERIYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAV 364 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +DN + ++ G + + I + L +++ + + +L G E +L+L G Sbjct: 365 MFLDLDNFKHVNDSLGHRIGDALLVEIAQRLRTTVRQRDTVARLGGDEFVLLLPG-ANAQ 423 Query: 413 RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + +H + L + F + + L+ ++ A Sbjct: 424 GAARVAAKMQEAALQPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKADG 483 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + + Q+ + + L N +R AL++ L L+ QP + G + +L Sbjct: 484 RN-SFRFFTPTMQAQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWH 542 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 + G ++P +F+P+ VL + L L T +VNL + Sbjct: 543 HPELGAVSPAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFR 602 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + + RL Y + P + LE+TE A ++ +++ ++QLH G R+++DDFGTG Sbjct: 603 QPQLLELVDRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTG 662 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR Q +KID FV+D+ + D IV +I +A+A + AE VET Q Sbjct: 663 YSSLSHLKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQL 722 Query: 706 ALLHKLGVQYLQGYLIGRPQ 725 L + G QG+ RP Sbjct: 723 TFLREQGCDEAQGFYFSRPL 742 >UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UG16_METS4 Length = 990 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 112/696 (16%), Positives = 225/696 (32%), Gaps = 39/696 (5%) Query: 67 VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 ++ G + L Q A G + ++ A+L + + + Sbjct: 262 IVAGREALRVTTDRLRLAQEAAGAGLFDWSLIDGSALLSPETLRLFNLPEDRATRVTQAE 321 Query: 127 WLGLV----TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 W + P+ + V + ++ D ++ + + Sbjct: 322 WAAAMHPDDLPVLAAETRRAVATGTTLRVEFRIPLPDGSD-RWIMGTGRVMADGDGRAVR 380 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YEND 237 ++ + A+ + A E+R + + L T + Sbjct: 381 VVGISIDVTDRKRAEQARQASEAALRVSEERLALALESGSDGLWDCDLTTGTSWVSDQWL 440 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSL 291 + GY + + L A Q + + Sbjct: 441 TMLGYRKGELDAGYETWLRLLHPDDREAVLARVRDHLEGRTPSYECEQRMRRKDGGWAWI 500 Query: 292 AFILAVL----ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 V+ + ++ + R A D LT LPN + Sbjct: 501 LERGKVVSRAPDGTARRVVGTHIDITARKEAEARVTHMARHDTLTDLPNRALFRERLEQR 560 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 L +D + ++ G + +R I R +++ + + +L G Sbjct: 561 LAEIRRHGGHCVLLALDLDAFKAVNDSLGHLAGDALLREIARRFRSVLRAEDTVARLGGD 620 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++L G + L + + + +G + E L Sbjct: 621 EFAILLGGTPRLESVMDFAERLVASVREPVTLEGQQVGVGVSIGIAIGPEHGEDADTLFR 680 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 ++ + E + ++ L ++ AL +G+ +L+ QP+ + Sbjct: 681 HADRALYRAKSDGRN-TFRFFEPAMDRAAEERRRLELDLQLALRRGEFVLHYQPVLDVAS 739 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 + + ++ G + P F+PL + L VL + + P Sbjct: 740 RAIVAVEALVRWNHPTRGQLGPGVFIPLAEETGLIVALGEWVLRTATRDARHLPE---HV 796 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R +VN+ + + ++ + +SP + LEITE ++ + L + Sbjct: 797 RVAVNISAVQVRHASLGQTVRAALDAAALSPDRLELEITESVLMGDSSLVRDALSGLREL 856 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +A+DDFGTGY++ L++ D +K+D F+ I + I+R+I L ++ Sbjct: 857 GTHLALDDFGTGYSSLSYLRQYPFDRLKVDRSFIASIP-DQGTVTILRAIVGLGTGLGMT 915 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V AE VET Q A + G +QGYL G+PQPL D Sbjct: 916 VTAEGVETPAQFAFVEAEGCAQVQGYLTGKPQPLPD 951 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 15/169 (8%), Positives = 25/169 (14%), Gaps = 22/169 (13%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFF 248 +R E R L+ V ++ L G + Sbjct: 133 TDITDRKRAEQQVAASEARYRALADGLPQMVWVMRASDGELLYRNARFAHYYGEIGTARG 192 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLC-LLNYNQNFLQGVETEYSLAFILAVLI--SFSVCL 305 + + + +V Sbjct: 193 ERVERSHPDDAARVAAEWARCRAEGCPFEIEVRLRRHDGVHRWHKLVKIPVRHAGETVEF 252 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCC 354 L TD L QEA + Sbjct: 253 LGTALDIEEIVAGREALR--VTTDRL-----------RLAQEAAGAGLF 288 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 24/268 (8%), Positives = 50/268 (18%), Gaps = 27/268 (10%) Query: 75 NLWNFHLSFLQTAVMLGSQTFVV-LCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 + + A L +V+ +L YG +R+ Sbjct: 144 QVAASEARYRALADGLPQMVWVMRASDGELLYRNARFAHYYGEIGTARGERVERSH-PDD 202 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + + P +I D + L+ + + F I Sbjct: 203 AARVAAEWARCRAEGCPFEIEVRLRRHDGVHRWHKLVKIPVRHAGETVEFLGTALDIEEI 262 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 R A + L L Sbjct: 263 VAG-------REALRVTTDRLRLAQEAAGAGLFDWSLIDGSAL-LSPETLRLFNLPEDRA 314 Query: 254 GVGKLRYPFLNL------------TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + AV+T L ++ + V+ Sbjct: 315 TRVTQAEWAAAMHPDDLPVLAAETRRAVATGTTLRVEFRIPLPDGSDRWIMGTGRVMADG 374 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQA 326 ++ + + + QA Sbjct: 375 DGRAVRVVGISIDVTDRKRAEQ--ARQA 400 >UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4J8_OXAFO Length = 1077 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 92/573 (16%), Positives = 194/573 (33%), Gaps = 38/573 (6%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEND 237 + R I + + + ++ ++L+ +L + Sbjct: 504 VLGIARDITRRKEDEEKLQLAA-----------LVYKNSSEAILITNAKNEILAVNPAFE 552 Query: 238 FIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 I GY + + + + A+ + Y Sbjct: 553 RITGYTPAEIMGKDPKILSSGRQDKAFYKAMWDALGKKGFWRGELWNRKKNGEVYLAWLT 612 Query: 295 LAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 + V+ + + + + + QA D LT LPN R L +Q Sbjct: 613 INVVYNEDGSVRYYVELSNDFTEKKEAEDMIWRQANFDFLTGLPNRRMLLDRLQQEIVKV 672 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +DN + ++ G M + + L ++E + + +L G E + Sbjct: 673 NQSGKKLALLFLDLDNFKDVNDTLGHDMGDLLLVDVAGRLNECVREIDTVSRLGGDEFAV 732 Query: 404 VLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L+ + + ++ + + + + ++ L Sbjct: 733 ILTELSDLRIAETVTQCMLRSLAQPYRLDGEIAYLSASIGMTVYPDDGTGIETLQKNADQ 792 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 + + + ++ L N +R A+++ + QPI + Sbjct: 793 ALYAAKQAGRNR-MSYFTASMQAAAQNRIRLANDMRIAVEEHQFEMLYQPIVELGTGKIH 851 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 + ++ GI++P +F+ + + L + + + + S Sbjct: 852 KAEALIRWHHPLRGIVSPAEFISIAEETGLILTISDWAFREVAREVGRWRERYYPGFQIS 911 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 N+ P K R ++++EITE + + + + H+ G Sbjct: 912 FNISPALFQSKTDYSDWFDELARLKAPGSSIVMEITEGVLLVSNWQVIAQLTEFHRHGME 971 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IA+DDFGTGY++ LK+ + D +KID FVK+I D + ++ +A + V+A Sbjct: 972 IALDDFGTGYSSLSYLKKFEIDYLKIDQAFVKNIENEPKDMALCEAMIVMAHKLDMKVIA 1031 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E V+ ++Q+ LL G Y QGYL P A+ Sbjct: 1032 EGVQNERQRWLLAGAGCDYGQGYLFSEPLAAAE 1064 Score = 52.7 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 17/169 (10%), Positives = 35/169 (20%), Gaps = 12/169 (7%) Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--- 227 + V + M L + + A E R ++ + L Sbjct: 358 GILFMVRLQEMRNQLLLNLEKRVEERTEDLNKVNAVLAQSEARLKSVFDNIPDLIWLKNT 417 Query: 228 --LLLCTPYENDFIAGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + L + + + + Q Sbjct: 418 AGVYLTCNRAFENFFDLEENRIIGKTDAGLPTDRQADMLRPEGSRIIEEGKPEVMEQWVT 477 Query: 283 Q-GVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 I A + + +L + R R + + L AL Sbjct: 478 NVQTGKRVFFDVIKAPVKTPDGRLIGVLGIARDITRRKEDEEKLQLAAL 526 >UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DNW4_DESVM Length = 1076 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 111/645 (17%), Positives = 201/645 (31%), Gaps = 33/645 (5%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 T + + LV D + L + Sbjct: 410 TGTALRSGEVAAVRRDGTPCWVELSLVRRQVMGTTYGICLVRDVTERRRAQEALHRAHGM 469 Query: 177 LI--YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 L L+R R E R + A + Sbjct: 470 LERKVRERTRELSRANAQLMLENAERRTVEQALRRAEARFRGIFEHALEGIFQSTPEGRF 529 Query: 230 LCTPYENDFIAGY-----LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 L I GY L+ I + + + + Sbjct: 530 LSVNPAMARILGYEGVQELLEGVESIGDGVYADPARRDEFVARMEEHGQVNAFEFRGRRK 589 Query: 285 VETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 L+ + + R QA DPLT LPN Sbjct: 590 GGDLIWLSVNARRVPGADGATMYYEGFLEDVTMGHESRERLEHQAFHDPLTGLPNRVLFH 649 Query: 342 QAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + L +D + ++ G + ++ + L +++ + Sbjct: 650 DRLQMALKRAARRRNYTFAMLYLDLDRFKVINDSLGHDVGDALLKVVSAKLRECVRDVDT 709 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + + G E ++L T G + + + + + Sbjct: 710 VARFGGDEFGVLLEETPTRGTAVRVARRIRAHLAEPVRIGPHEVFTTASIGIVLRTDQYS 769 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 T + L+ ++ + + + + + + +R A+++ ++ L+ Q Sbjct: 770 TPEELVRDADTAMYRAKEQGQSR-FKVFNKRMREEALRLLTIETDLRRAVERQEMRLHYQ 828 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P+ + G + +L + +GG ++P +F+P+ L LE + L Sbjct: 829 PVVALEDGGLHGVEALLRWTRTEGGDISPAEFVPVAEDTGLITSIGAFALEEVCLQLRRW 888 Query: 567 PCDKKGPR--FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 P VN+ +Q + + L +R P+++ E+TE + ++ Sbjct: 889 NEAGLPPPGVVHVNISGRQFMQPGLPHAVEMLLERTGTDPRSLRFEVTESVLMRHGSQAI 948 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + QL G R+ +DDFGTGY++ LKRL D IKID FV + + IVRSI Sbjct: 949 TVMAQLRDLGIRLCLDDFGTGYSSLGYLKRLPVDSIKIDRSFVAGLEHDRDGQAIVRSIV 1008 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L L +VAE VET Q +L LG +Y QG+L P D Sbjct: 1009 SLGLHLGLEIVAEGVETPTQAEMLASLGCRYAQGFLYAPPVSADD 1053 >UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSA6_PSYIN Length = 980 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 98/607 (16%), Positives = 214/607 (35%), Gaps = 30/607 (4%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 T+ + T ++ I + A+ Sbjct: 368 TLLEIPEEIIDTPFGSRTLYTKKIIITDEHNNPKFLLGISEDITERNAAKKALEESEHSL 427 Query: 208 LGKEKRAF------TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 ++ A L +L + D+ + +I ++ + Sbjct: 428 RESQRIARLGSYLFDLRSNQWSGSEILDNLLGIDADY-QRTMEGWAQLIHPDDRSRIDHY 486 Query: 262 FLNLTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVLISFSVCLL---YMVRIYHRSEW 317 F ++ N + + + + + + ++ + Sbjct: 487 FKE--DVLNQKKSFNQEYRMKRQNDQAVRWVHGLGELEFDNQGSPILMKGTIQDITERKL 544 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGL 369 A D LT LPN L+ + L +D+ + ++ G Sbjct: 545 AEAHLQALANFDQLTGLPNRFMLKDKITYLFTLARRNNESLTMMFLDLDHFKNVNDTLGH 604 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QI 426 ++ + I + L ++E + + ++ E +L+ ++ L Sbjct: 605 VIGDRLLIEIAKRLKSAIREVDLVSRIGSDEFILLFPN-TDADSALNIATKLIETVSLPT 663 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + L + + + E + L+ Q+ + E + Sbjct: 664 VFEHHELFITATIGIAIYPNDGEEFETLIKNADTAMSQAKRYSRN-TFHFFTEEMQVHLQ 722 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 +++ ++N +R AL + ++ ++ QP + G + +L + G ++P +F+P+ Sbjct: 723 RKLKIVNAMRHALLRNEMQVHYQPQISAVKGHIIGAEALLRWRHPELGDISPGEFIPIAE 782 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 VL + + + + +VNL L Q N+ G II + + + Sbjct: 783 SSGQIVAIGEWVLRTAIDQMKVWQNEGLAPMVVAVNLSALQFKQANLIGMIISMLNKAQL 842 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + Q + LE+TE + + ++ + QLH G R++IDDFGTGY++ LK+ + +KI Sbjct: 843 AHQYLELELTEAITMDDPQQAINIMNQLHAKGIRMSIDDFGTGYSSLSYLKQFKVYKLKI 902 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F+ ++ ++ D +V +I D+AK + +AE VET +Q L G +QGY Sbjct: 903 DQSFICNLARDSDDRAMVHAIIDMAKNLGMQTIAEGVETAEQLEFLRLHGCNEIQGYYFS 962 Query: 723 RPQPLAD 729 + P + Sbjct: 963 KAIPADE 969 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 120/698 (17%), Positives = 232/698 (33%), Gaps = 30/698 (4%) Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 F R + + + + F VL A+ + R R Sbjct: 374 WFSARVSPMPGGRVVWVARDITERREAERRLRESEERFRVLADAALEGLVISERGRILEV 433 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 +R + L + + +I+ + + V + Sbjct: 434 NRAYTEILGYEPEEVVGAPVLGRVVPEHREIARRRIAAGYDRPYEVEAVRKDGRRVHLEI 493 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC------ 231 Y R+ ++ +R +++ L V + L Sbjct: 494 RGRQATYRGRRVRITAMRDVTERKRAERELREAQEQYRRLVEQLPAVVYIDRLDETSSNV 553 Query: 232 -TPYENDFIAGYLVPVFFIIFTLGVGKLRY-----PFLNLTWAVSTLCLLNYNQNFLQGV 285 + + + I GY + + L A + L + Sbjct: 554 YSSPQTEKIFGYSPQEWASDPEMFPRVLHPADRESVLAAHARANARGEPLELEYRLIARD 613 Query: 286 ETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + VL ++ + L R A DPLT LPN Sbjct: 614 GRVVWVRDSSIVLRDAEGNPRWRQGLMVDITEQKNLEARLVHLAFHDPLTGLPNRALFMD 673 Query: 343 APEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 E + + +DN +F++ G + + R L + + + Sbjct: 674 RLEHALARAGRSGDVLAVLFIDLDNFKFVNDSLGHEAGDRLLALVARRLSGATRPGDTVA 733 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E ++L G G + + L + ++ Sbjct: 734 RLGGDEFTVLLEGIADGGEAARVAGRVAEVLREPFRVAGRELFVSASVGISVSTAGSGSV 793 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ ++ + +S ++ L N +R A+ + +L LY QP+ Sbjct: 794 EELMRGADLAMYEAKREGKDR-YRVFDFGMSRTAHDRLRLENDLRRAVGRDELRLYYQPV 852 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + ++ +L GI+ PD+F+PL + + +VLE A Sbjct: 853 VRLGDGRVVAFEALLRWEHPRRGILLPDRFVPLAEETGMIVGIGRRVLELACSRAAGWRR 912 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + SVN+ L++ + + R+ +R + P+ ++LE+TE A + ++ Sbjct: 913 QEPSLAVSVNISARQLVRPDFVEEVGRILQRTGLEPEGLVLEVTESAAMDEPGEAARALQ 972 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +L + G R+A+DDFGTGY++ L+RL +KID FV+ + ++ ++V + L++ Sbjct: 973 RLRERGVRLALDDFGTGYSSLSYLRRLPVCFLKIDRSFVEGLGGDSGSGVLVGGVIALSR 1032 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 VAE +ET Q L +LG + QGY P P Sbjct: 1033 ELGFEPVAEGIETPGQLERLLELGCELGQGYYFASPMP 1070 Score = 58.8 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 26/258 (10%), Positives = 54/258 (20%), Gaps = 6/258 (2%) Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 + ++ + S+ V A L RY S L+ Sbjct: 268 IGVATDVTGRVAAERRLRESESELRAVFAAMTDAVLVLDREGRYLRVSSADPSLLYAPAE 327 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 + F I I +L + + + + Sbjct: 328 GRVGKTVHEVLPREQARLFMDAIRRALEGGRTIGVEYELPTGGRSRWFSARVSPMPGGRV 387 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPV 246 V R E+R L+ A +++ +L I GY Sbjct: 388 VWVARDITERREAERRLRESEERFRVLADAALEGLVISERGRILEVNRAYTEILGYEPEE 447 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + + + ++ Y ++ L + Sbjct: 448 V-VGAPVLGRVVPEHREIARRRIAAGYDRPYEVEAVRKDGRRVHLEIRGRQATYRGRRVR 506 Query: 307 YM-VRIYHRSEWLNRRWH 323 +R + R Sbjct: 507 ITAMRDVTERKRAERELR 524 Score = 43.0 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 16/154 (10%), Positives = 31/154 (20%), Gaps = 2/154 (1%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + + R+ RR E R + + +++ L Sbjct: 132 VLVECAELAAVALENARLYAEAREELAARRRAEEALRRSEARLRAVVAGSPVTMFALDPS 191 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + G +G + A L E L Sbjct: 192 GVFTLAEGRGLERMGLLPEEVVGRSAFEVIGGDPRLAADLRRALAGECLASVAEFGEVVL 251 Query: 292 AFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWH 323 L+ L ++ + RR Sbjct: 252 ELHLSPLLREGRVEGVIGVATDVTGRVAAERRLR 285 >UniRef50_Q1H236 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=Q1H236_METFK Length = 722 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 112/646 (17%), Positives = 223/646 (34%), Gaps = 44/646 (6%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 L L L P + + + P + G + + L Sbjct: 50 LVLLDLSMPDMNGFDVLTELATYSAPPPVIVISGTKTLNAAIEAMRLGAYDFLRKPYQPE 109 Query: 185 YLTRMIV---SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYEN 236 L I + R A E L + + L + Sbjct: 110 ELLHTIENAIEKSRLETQNRSIHARLEESENLYRYLVNSSPDIIYTLDDSGHFTFINHRV 169 Query: 237 DFIAGYLVPVFFIIF----TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET--EYS 290 + + GY R + N Sbjct: 170 ETLLGYRRESLIGKHYTEIIYSDDFDRASYAFNERRTGNRATRNIELRLKCKDLESDIRH 229 Query: 291 LAFI-LAVLISFSVCL-------------LYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + V+++ + + R + + QA D LT LPN Sbjct: 230 FEINFITVVLNATGTYGGTHESGTPFSGTYGVARDISDRKKVEEVITRQAYHDTLTGLPN 289 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 + + + L +D ++++ G ++ + + L ++ Sbjct: 290 RALFKDRLNVALNHAKRNQQQLAIMFLDLDRFKWVNDTLGHFYGDELLKHVAQRLSGCLR 349 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFD 445 + L ++ G E L+L + + + R + + + + Sbjct: 350 AQDTLARMGGDEFTLLLHDLQQPEDASLVAAKIVDELKRPFLLDEREIFISSSIGIALYP 409 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + +T++ L+ E ++ K++ + N +R A+++ ++ Sbjct: 410 DHGDTIETLIKSADIAMYHVKWRGKN-GYQYYEASMNAMFHKKLSMENELRRAIEKKQIM 468 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ QP + ++ G + + + GI++P +F+PL + L +L K Sbjct: 469 LHYQPQVDVETRKIIGLEALARWHHPELGIISPTEFIPLAEETGLIFSLSEMLLGEACKQ 528 Query: 563 LATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + R ++N+ P + +++ + + + +H+ P+ +EITE + E Sbjct: 529 MQLWEAAGLLNFRLALNVSPQLVEEESFVSKTLSYIQSHHLKPEFFEIEITENLLVRDLE 588 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 +++ ++ L K G RIA+DDFGT Y++ L++ IKID FV DI T+ I+ Sbjct: 589 NTVAKLKALGKHGIRIALDDFGTCYSSLSYLRQFPIHNIKIDKSFVGDINTHDESVPIIT 648 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +I+ +AK L ++AE VET QQ LHK+G +QGYL +P P Sbjct: 649 AISGIAKGFKLDLIAEGVETLQQMKTLHKMGCNIMQGYLFSKPLPA 694 >UniRef50_A1ATR3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ATR3_PELPD Length = 754 Score = 663 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 100/583 (17%), Positives = 194/583 (33%), Gaps = 42/583 (7%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAG 241 R I+ + + E+ L + + L + + G Sbjct: 132 VRNILYRRHLERDHVLITSRLQHSEQLHRFLVESSPDLIFTLDNSGCFTFINSRIESLLG 191 Query: 242 YLVPVFF------IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ-----NFLQGVETEYS 290 + I+ + ++PF L ++ Sbjct: 192 FSREELIGSCYDTIVLAEDLKTAQHPFTERRRGNRATTNLEIRLKCTPSHYRNFENHHIV 251 Query: 291 LAFILAVLISFS----------VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + + + R + QA D LT LPN R Sbjct: 252 VMMSSTGIYGEHDNDFPLARCFSGTYGVARDITDRKIAEETIAFQAFHDHLTHLPNQRLF 311 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + +D + ++ +G ++++ L ++ + Sbjct: 312 KDRLEMAITHSKRHGGMVGVMFIDLDRFKIVNDTHGHAAGDELLKNVAHRLRHCIRAVDT 371 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 L + G E ++L + + + + E Sbjct: 372 LARKGGDEFTVLLPDLMRAEDAALIAEKIMHELGIPFSVAGQKFHVSASIGIAIVPRDGE 431 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 ++ LL + A ++ TK++ L N +R A+ + L+ Q Sbjct: 432 SIDTLLKSADIAMYRVKASGKN-GYRFFTPDMNICYTKRISLENELRQAIPNSEFELFYQ 490 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + ++ G++ P F+ L + + VL + LA Sbjct: 491 PQVSINGASIIGLEALIRWRHPTHGLLNPGDFIELAEETGMIGTITDWVLAEACRQLAHW 550 Query: 567 PCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R +VN+ P + ++ ++ R + + P ++ +EITE+ + S + Sbjct: 551 RSMGFSDLRIAVNVSPKEFERDDMVEQLSRFMSTFQLPPDSLEVEITEKILLRDTPSVIN 610 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ L + G RI+IDDFGT Y++ L++ IKID FV+D+ + I+++I Sbjct: 611 KMKTLRERGIRISIDDFGTCYSSLNYLRQFPISTIKIDQSFVRDLSEEHRISPIIQAIIG 670 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A L ++AE VET Q LH LG +QGYL RP P Sbjct: 671 IANGFGLHLLAEGVETHCQMQTLHALGCNEMQGYLFSRPAPAE 713 >UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KFD6_9GAMM Length = 643 Score = 663 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 107/635 (16%), Positives = 217/635 (34%), Gaps = 37/635 (5%) Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL-IYNMLFYYLTRM 189 + + + + + I+ A+ + LL ++ + L+ Sbjct: 1 MVAYIAYYLVLVGFTLANNRTYIARLRLSAENQSLMDALLEEASSREEVIASRTSELSLS 60 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---------YENDFIA 240 + + + ++ + + +F+ Sbjct: 61 NKQLAQQISRRKELERRTQQDLELLNSVINATSDLIFYKDYAANDGRYLGCNESFINFLG 120 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVS-TLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + + ++ T ++ + L+ L+ Sbjct: 121 RASKDIIRQTDRQFFSEKEVKLIHATDHIALKEGSHVVERWMEDPQGHRVLLSIKLSSFN 180 Query: 300 SFSV---CLLYMVRIYHRSEWLNRRWH-------LQALTDPLTLLPNFRALEQAPEQEA- 348 ++ + R + A D LT LPN L Sbjct: 181 DTQGNVRGVVGIARDITDQKKTEETLRFQQRSLEHLAHHDALTGLPNRLYLIDKLNHALL 240 Query: 349 -------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + L +D+ + ++ G + +R++ R L +++ + + +L G E Sbjct: 241 SPDLNTASLAVLFLDLDHFKDINDSLGHSLGDEVLRAVSRRLSACVRKADVIARLGGDEF 300 Query: 402 LLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +VL G + + + + ++ L++ G+ T + LL Sbjct: 301 TIVLQGIGSSIIAVEVAQKILKVFQEPLTLSDRTLNVSTSIGISVSPGDGVTTEELLRNA 360 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 ++ ++ + ++ + + + TAL +G+ + QP + E Sbjct: 361 DAAMYRAKRSGRN-TFMHYSPDMTERALARLSMESDMHTALARGEFHVAYQPQVDMRSGE 419 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPR 574 G + ++ G + P++F+P+ + L VLE + R Sbjct: 420 LMGVEALMRWEHSTRGNIPPEEFIPIAEENGLILAMGSWVLEEVCAEQKRLKNAGLSDIR 479 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++VN+ LL + + S + LEITE E + ++ + G Sbjct: 480 YAVNVSGRQLLNPEFLALVEHIVSTKDCSGSQLELEITESVLLHEPELAAKAMQSFREMG 539 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 IAIDDFGTGY++ LK+ + +KID FV+DIV + D I ++I L A L V Sbjct: 540 IAIAIDDFGTGYSSLAYLKQYPLNRLKIDASFVRDIVVDPDDRAIAQTIIALGNALDLEV 599 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET++Q+A+L G QGYL +P AD Sbjct: 600 IAEGVETEEQRAMLVSDGCSLGQGYLFSKPISPAD 634 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 663 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 98/552 (17%), Positives = 201/552 (36%), Gaps = 35/552 (6%) Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 +E+ V + + V L + + N + Sbjct: 331 RIQEEGKVLSLATIQDGVSMPSYSFNLSDT----PCEKVVDEGMCLMSEGVMEHYPNCSL 386 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAV----LISFSVCLLYMV---------RIYHR 314 + +L+ + + +L ++ R Sbjct: 387 VTQMHAEGYVGTPIRDHNGEVLGVLSVLSRGKIKSLERAKDVLAIMAARVSAEIEREISE 446 Query: 315 SEW--LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMS 364 D LT LPN + + + + +D+ + ++ Sbjct: 447 QRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLFIDLDHFKKIN 506 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + + R L + + + +L G E ++L + + + Sbjct: 507 DSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIILDQLNNIENVILIAQEVNRR 566 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + L + + G+ + + LL ++ + Sbjct: 567 LAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRD-NYRFYTAGL 625 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 + + ++ + L +R A+D+ L++Y QP ++ G + ++ + G+++P F Sbjct: 626 NERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGMISPVDF 685 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + L VL R SVN+ QK++ + R+ Sbjct: 686 IPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLVPMVRRIL 745 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + +SP+ + LEITE ++ + ++ + +LH G +++IDDFGTGY++ LK+ Sbjct: 746 QETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPI 805 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +KID FV+D++ + DA I ++ DLA+ +L+V+AE +E Q Q L G Y Q Sbjct: 806 QYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQ 865 Query: 718 GYLIGRPQPLAD 729 GYL RP P + Sbjct: 866 GYLFSRPIPAHE 877 >UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2I6_METRJ Length = 819 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 119/752 (15%), Positives = 230/752 (30%), Gaps = 32/752 (4%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + I++ F + + P + S + +A + + + Sbjct: 50 LLASGFSIGAGIWSTHFIGMLGYDPGVVLGYEPRTTLLSLIVAIAAATVAFLFARAMPSR 109 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 W G L +F + + L R Sbjct: 110 WAGAGAGLALGIGIACMHFLGIAGVRLPGHFTWDPALAATAIAAGCGLAAAGMAIHVGRA 169 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + V + I +L + + L + ++ Sbjct: 170 GARARLAAATVLTLAIAVLHFLAMAA--ARVVPDPALAVPQLGLARGVLAAGIAGMMAVI 227 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + F LT M+ + R K ++++ Sbjct: 228 LAFAALTLMLDHLRRINVALARQGRMLREKTLLLDATLDSMDQGLIMVDAGGVVRVCNER 287 Query: 241 GYLVPVFFIIFTLGVGKLRYPFL-NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV-- 297 + R + + +G + + Sbjct: 288 ALALLDLPRAMMQARPSYRAVLRHEASRRERRRPDRSIRTWIERGEAGQTQVHERARPNG 347 Query: 298 -------LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 + + + + A D LT LPN + E+ Sbjct: 348 LVLEVRTVPLADGGFVRTFTDITKRKAAEAEVARLARHDVLTGLPNRALFHETLERSLAD 407 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + L +D + ++ G +R + L + + + +L G E Sbjct: 408 IVQRGGACAVLYLDLDGFKSVNDSLGHQAGDELLRRVAAGLRGIAGDGA-VARLGGDEFA 466 Query: 403 LVLSGPETEGRLQHMVN--ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + LS L + +G + +PL + Sbjct: 467 V-LSDGGAAEAGALAERLIALFDSPFSVGGHRVGVGLSVGIALAPEHGTDAEPLYRRADL 525 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GE 517 ++ A + + ++ +L +R ALD L L+ QP + Sbjct: 526 ALYRAKAEGRG-TYRIFTPAMDEEAEERRVLERDLRQALDDNTLGLHYQPQVDGHTGALV 584 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 G++ +L G ++P+ F+PL + L VL + A + +V Sbjct: 585 GFEALLRWTHPVRGSVSPNLFVPLAEETGLIVALGDWVLREACREAAQWAQ---PLKVAV 641 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL P + ++ ++ + +SP + LE+TE ++ ++ + +L +G RI Sbjct: 642 NLSPRQFQKPDLPETVLAILAETGLSPDRLELEVTESIIINDMARAVGILRRLKSYGIRI 701 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGYA+ L+ D +KID FV + T A+IVR++ L ++ + VVAE Sbjct: 702 SMDDFGTGYASLATLQAFPFDKLKIDRSFVAQLGTGPQAAVIVRAVLSLGRSLGMGVVAE 761 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q L + +QGYL GRP+P+ D Sbjct: 762 GVETHAQMKFLTEEACGEMQGYLFGRPRPITD 793 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 126/760 (16%), Positives = 228/760 (30%), Gaps = 68/760 (8%) Query: 35 AIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQT 94 + + + L+ + + ++ R L Sbjct: 154 VTLGIAMLALSILAAVLFGLVITRRLRRLDAGARAFRAGRLDHRIPPLANDEMGDLARTL 213 Query: 95 FVVLCACAILRWQLG----------------TRWRYGL---TSRYVWQRLFWLGLVTPIG 135 + + L R + Q F G I Sbjct: 214 NALASDLGQSQSTLRQQNLKLNRSVERMEALLRGAEAVLWEAEPATGQWRFVNGDTQAIL 273 Query: 136 IKCSMYLVGSFFD-FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS-- 192 + + + + S N + R IVS Sbjct: 274 GISAQQIGQPGIREARVHADDLPRLRETYRQAGPTPSSVDYRYRSNEASWVWLRDIVSSA 333 Query: 193 -----------PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYEN 236 R+ E R + + + Sbjct: 334 SDSDGHAVLRGLTLDVSPQRQAALALKDSESRYREVIEHVSEVIFRTDHQGRWTLLNPAW 393 Query: 237 DFIAGYLVPV--FFIIFTLGVGKLRYPFLNLTWAVSTL--CLLNYNQNFLQGVETEYSLA 292 + + GY + + + LT + L L ++ Sbjct: 394 EELTGYSIAESLGRPVSEFVSAEDSPLLEALTNQLLHGNKSQLRDELRLLTRAGEPRWVS 453 Query: 293 FILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---- 345 + ++ + A D LT LPN L Sbjct: 454 VFVRSSQDAEGRVIATFGTLTDITERKRAEEEIRRLAFYDSLTELPNRSLLYDRLRLAMA 513 Query: 346 ----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + L +DN + ++ G + +R + + ++E + L +L G E Sbjct: 514 SAARSRHHGAILFLDLDNFKDINDTLGHDVGDELLRQVASRMQGTIRETDTLARLGGDEF 573 Query: 402 LLVLSGPETEGRLQHMVN---------ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 +++L+ + Q V L + F + + Sbjct: 574 VIILNDL-HPEQAQAAVEAETLGSKLLHLLAEPFRLGEHERHCTPSIGATLFGDGEVNVD 632 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL Q ++ L E + + L R AL + L L+ QP Sbjct: 633 ELLKQADLAMYRAKDSGRN-TLCFFEPEMHQVVKARAALEADFRKALREDQLHLHYQPHV 691 Query: 513 N--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + +L + G++ P +F+ + Q L + VL++ + LA + Sbjct: 692 DDQGHILGAEALLRWSHPERGMVPPMEFIAVAEQTGLIIKLGRWVLQTACQQLALWHRES 751 Query: 571 KGPRF--SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + R +VN+ + + + + Q ++LE+TE + E+ + + Sbjct: 752 QWMRINMAVNVSAKQFRHPDFVREVAEILQSTGAPAQHLVLELTESLLLEDTETVITRMN 811 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L + G A+DDFGTGY++ LKRL ++KID FV+DI+ + DA I I LAK Sbjct: 812 ALRELGVGFALDDFGTGYSSLSYLKRLPLSLLKIDQSFVRDILVDANDAAIAEMIITLAK 871 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L V+AE VET +Q+ L ++G QGYL GRP P+ Sbjct: 872 TLGLEVIAEGVETPEQRDFLLEMGCHQFQGYLFGRPGPVD 911 Score = 50.3 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/322 (9%), Positives = 68/322 (21%), Gaps = 18/322 (5%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN 78 L + S A++ ++ P V ++ R + V+ + L Sbjct: 49 LLMTSALVPGLAYSDAAMLQDVLQLVSGQPDLVYAVVIDAGERR--LAVVGTPPESLLPV 106 Query: 79 FHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC 138 + + ++ + L + S + +R LG+ Sbjct: 107 TGTQVDERGQVHITRRIDLAGQSLGLLGVGYSPEGVNALSDALLERNVTLGIAMLALSIL 166 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 + L G L+ A + + A L L + +Q Sbjct: 167 AAVLFGLVITRRLRRLDAGARAFRAGRLDHRIPPL-ANDEMGDLARTLNALASDLGQSQS 225 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFFIIFT 252 R+ +R L A + + I G Sbjct: 226 TLRQQNLKLNRSVERMEALLRGAEAVLWEAEPATGQWRFVNGDTQAILGISAQQIGQPGI 285 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI--LAVLISFSVCLL--YM 308 L + ++ + ++ + + Sbjct: 286 REARVHADDLPRLRETYRQAGPTPSSVDYRYRSNEASWVWLRDIVSSASDSDGHAVLRGL 345 Query: 309 VRIYHRSEWLNRRWHLQALTDP 330 AL D Sbjct: 346 TLDVSPQRQAA-----LALKDS 362 >UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYR2_RUBXD Length = 754 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 115/696 (16%), Positives = 222/696 (31%), Gaps = 36/696 (5%) Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 +L + L F + V G + V C L V Sbjct: 51 PGLLAAGVILLTYGGLLLFARRRVGAGERVEAVWTICVGLLLAALLMSAVQPGWLAVLAV 110 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + + + L+ F L + + A+ + + F L Sbjct: 111 TPLISVAVALPYVRGGDLLRLIFLAWLTVVVMAILSRALPPLSRPPAWFVDAFTAGALAA 170 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC------------- 231 +++ +A + E+R + L Sbjct: 171 ATAVVLLLLWQFSTRLNETLARTRAAEERYALAERGVNDGLWDWDLRRDRVYYSSRWKEM 230 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + D + F + +L LN + + Sbjct: 231 LGWREDEVGEEPDEWFRRVHPQDRKRLLEEVREHLR--GRREHLNVEYRIRHRDGSYRWM 288 Query: 292 AFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA 348 + + R + + +A D LT LPN + + Sbjct: 289 LTRGLAVRDGEGNPVRMAGSQTDITRRKQAEEKLLHEASHDALTGLPNRAFFMERLGEAL 348 Query: 349 G-------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G M + + L ++ + L +L G E Sbjct: 349 RRPGDGDRVAVLFIDLDRFKMINDSLGHAMGDRLLVAAAERLKGCLRPQDTLARLGGDEF 408 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++L G + + + L + L + + LL Sbjct: 409 TVLLEGVSS-EEAASVADRLLERLREPFRLDGYELFTAASVGVVLGGRERAGPEELLRDA 467 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--- 515 ++ A E + + + L N +R A+++ + + QPI + + Sbjct: 468 DIAMYRAKALGGGRK-GIFEAGMHTRAMELFRLENELRRAIEREEFTAHYQPIVSLKTGL 526 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKG 572 G++ ++ + G++ PD+F+P+ + L +L V+ L + + Sbjct: 527 ISGFEALVRWRHPERGLIRPDEFVPVAEETGLIVPLELSVVREACASLVSWQREFPQHRP 586 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 SVNL L + + ++ R+ + +++ LE+TE N S+ + +L Sbjct: 587 LTMSVNLSRNQLARPELPEQVERILLETGLDARSLRLEVTESAIMENVGSAAATLSRLRD 646 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 R+ IDDFG GY++ L +L D +K+D FV + D IV++I LA L Sbjct: 647 MNIRVHIDDFGMGYSSLSVLHQLPIDALKVDRSFVGRMDGANDDVEIVQTIITLAHNLGL 706 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VE ++ L +LG Y QG+L P A Sbjct: 707 DVVAEGVEREEHLDRLRRLGCDYAQGFLFSEPLDAA 742 >UniRef50_Q5ZVT3 Inner membrane protein PLUS sensory box protein LssE n=6 Tax=Legionella pneumophila RepID=Q5ZVT3_LEGPH Length = 792 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 128/750 (17%), Positives = 237/750 (31%), Gaps = 50/750 (6%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHL 81 ++ Q+ IS A+ + W L I+++ + M Sbjct: 30 LLFDQVGMAISGEALTVTILPIALWSVTNHELLIIWMIFTYVFSDLYKSMLLFYYNKQPT 89 Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI-----GI 136 F + VV A + T ++ G+ + Sbjct: 90 LFSTEKWLFLFNLGVVSSGLAWG-FASSIMIPASSTLHQIFVVFLITGVTAAANSLYSPV 148 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF- 195 + S +L P I F + + +L + + + F Sbjct: 149 RLSYFLFLVTAFVPFTIWLFSKGQVYLLLGFCGIIYLGIMLFISYYSNRILINTLKMRFK 208 Query: 196 ----------AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND---FIAGY 242 + + A +L++ L E F+ + Sbjct: 209 ISNLNSTKDILEKKVADRTKELEKILALTKSTLESTADGILVVDLKGNIEFCNQQFLKMW 268 Query: 243 LVPVFFIIFTLGVGKLRYPFLNL---------TWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + FI ++Y L + + Sbjct: 269 GIAPGFIDSHNDTETIQYVLNQLKNPEEFLKQIKELYNNPKQESFDELHFKDGKIFERYS 328 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------ 347 L + + ++ R R QA D LT LPN AL + Sbjct: 329 QPHWLDNKIIGRVWSFRDETLR----TRLAYQANHDSLTGLPNRTALYDRLDHAINYCKR 384 Query: 348 --AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 S L IDN + ++ G + R L ++ ++ + + G E +L+L Sbjct: 385 LNTSLSVLFLDIDNFKLINDSLGHDAGDILLYEFSRRLKGCIRHSDTVARFGGDEFVLLL 444 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + + ++ I + + F + LL Sbjct: 445 M-TTEPKDVILIAQNILKAVAQPIKLPTQEVIVTTSIGISLFPKDGIDASTLLKNSDTAM 503 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 + ++ Q+ K++ + I A+ + + QPI N E G Sbjct: 504 YLAKKEGRN-NFQFYNNSINQQSLKRLEIQTQIHNAIKNNEFFILYQPIYNLRSGELVGA 562 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + ++ G+++PD+F+P+ + L + VL + T SVN Sbjct: 563 EALIRWGHPAIGLLSPDEFIPIAEETGLINQVGEWVLRNACVQNKTWQLMGLPHISISVN 622 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L N + K + PQ + +E TE + + ++ + G ++A Sbjct: 623 VSWRQLKNSNFIEIAESVLKESRLDPQYLEIEFTESTMIQKSTPIDSTLIKISQLGIKMA 682 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY+N LK D +KID F+++ TN DA IV +I +A + L V+AE Sbjct: 683 IDDFGTGYSNLSYLKTFPFDKLKIDRSFIQNCTTNPNDASIVEAIIAMAHSLELKVLAEG 742 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+T + +H+ G +QG+L G P Sbjct: 743 VDTIDKAFFMHQHGCDEVQGFLYGLPVKAD 772 >UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ25_9GAMM Length = 818 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 112/572 (19%), Positives = 203/572 (35%), Gaps = 29/572 (5%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 F + I A+ + +R A T A LL + Sbjct: 238 ITHFVSTGQNISDRMEAETIRKRLTATLEAT-----TDFVAIADLQGHLLYANAARRSVL 292 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAV---STLCLLNYNQNFLQGVETEYSLAFILA 296 I ++ A+ + + E ++ ++ Sbjct: 293 GLAPEDKVGICTLSDGHTEWASAKLMSKAIPTAMQEDTWSGELALIDRDGLEIPVSEVII 352 Query: 297 VLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------ 347 + R + L +A D LT LPN L +Q Sbjct: 353 AHRGPDGEVQFFSAIARNISERKRLEEELAYRASHDALTCLPNRSLLLDRMQQALAYARR 412 Query: 348 --AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + +D + ++ G +R++ + ++ ++ + + G E +++ Sbjct: 413 YNHRVGVLFVDLDRFKRINDTLGHHAGDTILRTVAERICQGVRRSDTVSRHGGDEFVVIA 472 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + L +V+ + S I N + + + + E LL Sbjct: 473 AQVFDSNDLASIVSKIRKTVSEPIKVKNRQVVLTCSIGIALYPFDGEDTDTLLKNADTAM 532 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY--- 519 Q+ + + ++ Q+ + + L +R A+ G+ +L+ QP + + G Sbjct: 533 YQAKENGRND-FQYYTKEMNAQSHEMLNLEEELRRAVKAGEFVLHYQPQVDLQ-TGALSR 590 Query: 520 -DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSV 577 + ++ + G++ P F+P++ + L V+ ++ A + +V Sbjct: 591 LEALIRWQHPERGMLAPGTFIPVLEETGLIEPVGEWVVREAVRQCAVWKEMELPPVTVAV 650 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL NIA I R+ I P + LEITE ++A + L + G R+ Sbjct: 651 NLSVRQFANLNIAEAIERIVTEAGIPPACLELEITESVLMADAFDGAEALRALSQRGLRV 710 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 A+DDFGTGY L+RL + +K+D FV D+ + A IV +I L VVAE Sbjct: 711 AVDDFGTGYCALHYLRRLPVNTLKVDHSFVSDLEGDPTTAAIVSAIITLGHDLGCKVVAE 770 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q LH+LG QGYL RP P + Sbjct: 771 GVETLAQCNHLHRLGCDLAQGYLYYRPCPPEE 802 Score = 75.4 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 5/147 (3%), Positives = 27/147 (18%), Gaps = 9/147 (6%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 R ++ S E+ A + + + + Sbjct: 112 LVPAVRRELREAKLRRERVRAQKQLQKLSRAIEQTAECVFITNPDGI---IEYVNPAFER 168 Query: 239 IAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + G+ + ++ + + + + ++ Sbjct: 169 LTGFTSEEAMRNSPRILRSGQHSASFYRDMWRTLKDGGVFRGMVINRRKNGALFYEEKVI 228 Query: 296 AVLISFSV---CLLYMVRIYHRSEWLN 319 + + + + Sbjct: 229 TPIKDSNGVITHFVSTGQNISDRMEAE 255 >UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74EC6_GEOSL Length = 799 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 102/573 (17%), Positives = 203/573 (35%), Gaps = 39/573 (6%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL--------SVLLLLLCTPYENDFIAGYL 243 + R + E + L +L G Sbjct: 209 EHLTYLVRSSRVLQELHESEAQNRALLNAIPDMMLHVCREGTILDFRAGNGCAYAAFGGN 268 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + I L G + A++T ++ ++ + + Sbjct: 269 LRGRTIADLLPPGAAAQFMAQVGHALATGTMMVCEYELEGPGGLNTHE---ARIVANGTG 325 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 +L +VR A D LT LPN + + + Sbjct: 326 TVLAIVRDVTERRQSEEMIRYLAHHDSLTGLPNRIFFGEMLELVLSRARRDGKQVAILFV 385 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY------------QLPGSELLL 403 +D+ + ++ G H +R + L ++ ++ + + G E +L Sbjct: 386 DLDDFKLINDTLGHAAGDHLLREAAQRLKGCVRSSDYVASGAESGLCGNIARFGGDEFIL 445 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 L ++ + + + S + + + + + + E L+ Sbjct: 446 SLGNLDSVDDVVAVTQRIISEFSREFRIDGHEIFVSVSIGISMYPDDAEDTGSLVRNADM 505 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 + + ++ +++ + ++R AL++G++ ++ QP + E Sbjct: 506 AMFAAKEEG-GPSFRFFTRGMNEAAQQRLSIELSLRKALERGEIFVHYQPKVDLSCGEIT 564 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 G++ + + G++ PD F+PL + L R VL + T + + Sbjct: 565 GFEALARWHHPELGLIPPDTFIPLAEKNGLIVRIGEWVLRAACAQARTWIDEGFSDLCMA 624 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +NL N+ + + + P + EITE E +M + +L G R Sbjct: 625 INLSSHQFTSGNLTSMVKEVLDETELPPSCLEFEITEGILMERTEKTMRILSELRDMGVR 684 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I+IDDFGTGY++ LKR + +KID FV++I + DA I+++I +A+ +L VVA Sbjct: 685 ISIDDFGTGYSSLGYLKRFPVNTVKIDRSFVREIDSPHEDAAIIKAIIAVARNLNLQVVA 744 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VE+ +Q L G QG+L G+P + Sbjct: 745 EGVESHRQTEFLLAHGCNEAQGFLFGKPVHPDE 777 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 104/565 (18%), Positives = 194/565 (34%), Gaps = 26/565 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF-- 247 + S A T + +L I GY Sbjct: 639 VASLVDDITRREAVEAELRLAATTFETDEAILIAGADGRILRVNAAFSRITGYRQEDVVG 698 Query: 248 -FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 + + ++ + Y + + Sbjct: 699 RNPRLFKSGLHGAEFYREVWRSLEQTGRWQGEIWNRRKNGEVYPERKTITAVRSANGDIT 758 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + + + A D LT LPN + + + + + Sbjct: 759 HYVAISSDISELKRTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREGTYGALLFM 818 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G M + + L +++ E +L G E +++L+ + + Sbjct: 819 DLDYFKTLNDSLGHHMGDRLLVQVAERLKNCLEDEEAAARLGGDEFVVLLAPAKPSASVA 878 Query: 416 --------HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 V L S ++ + F T + +L Q + Sbjct: 879 AGQAIVHARRVRELLSAPFQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTAMYVAKN 938 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILAR 525 + E + ++ L +R AL + +Y QP + G + ++ Sbjct: 939 EGRD-GVRFYESAMEAVVRGRLELEKALRKALANDEFEVYYQPQMLGDGRVVGAEALIRW 997 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTL 584 + G ++PD+F+P+ Q + R VL LA SVN+ P Sbjct: 998 FHPERGAISPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRARGLALPKLSVNVSPRQF 1057 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++ ++ ++ + +SP + LE+TE ++ E ++ I +L G +IDDFGT Sbjct: 1058 MRSDLMTQLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFGT 1117 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK L D +KI FV+D+ ++ DA IV +I +A+ L V+AE VET+ Q Sbjct: 1118 GYSSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDVIAEGVETRTQ 1177 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 +L + G QG RP P D Sbjct: 1178 VEILERYGCHRFQGNYFARPLPKDD 1202 Score = 63.1 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 27/314 (8%), Positives = 69/314 (21%), Gaps = 11/314 (3%) Query: 24 LIQLSRFISPLAIIHSSYIF-LAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLS 82 L I + + + + +++++ + + L+ Sbjct: 351 FAALGLEIDAAVRRDRVAAYRVVAIAIALLIAMGTLGFEVSRQRLWLSSRIAKAERRRLA 410 Query: 83 FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS--RYVWQRLFWLGLVTPIGIKCSM 140 Q +GS + + + + +Q L + + + Sbjct: 411 EAQRLARVGSWVYDPATDRMTWSEETYRIFGLPFDGEVPHRYQEFAALFVPEDRELIEAA 470 Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI-YNMLFYYLTRMIVSPHFAQIL 199 G ++ AD V+ + + + A+ Sbjct: 471 LRGGRDDLLGVERPLCVRRADGAVRQVNFKVELQGRRGDSGPVLQGTLQDVTERWEAERA 530 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF--TLGVGK 257 R+ + L ++ + I GY L Sbjct: 531 LRQSEERLRLHVEHLPLAVIEWDLDFIVSRW--NPAAERIFGYGADRMIGRSAGILFPED 588 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR---IYHR 314 + + VS + + L + ++ + R Sbjct: 589 VLEQAEAIWREVSGGSGNRVVTANVTADGRTIRCEWYNTPLTTPDGTVIGVASLVDDITR 648 Query: 315 SEWLNRRWHLQALT 328 E + L A T Sbjct: 649 REAVEAELRLAATT 662 >UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL67_THISH Length = 685 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 116/679 (17%), Positives = 217/679 (31%), Gaps = 49/679 (7%) Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 + ++ G + + + R + + L + I+ S+ Sbjct: 8 QRITLIGGVLLAALTLVSGFAVYAVMQRQLEAVLVNSLQSSLHSDRRLFETEIRGSVVNA 67 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 + P I +A SL R++ +Q Sbjct: 68 LTVSTRPFVIQNLARLREAPEDASAAHSL--------------QRLVRRLVKSQQQTAEA 113 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKL 258 A E+R A V L L + GY + Sbjct: 114 NARLRDLEERWRFALDSAGAGVWDLDLSAGKILLSVRCKHMLGYEEHEIGASAEEWQALV 173 Query: 259 RYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLA----FILAVLISFSVCLLYM 308 A + + + + L+ Sbjct: 174 HRDDAPALIAACQRLVDGEVQSFTHEHRKRCKDGSWKWVQARGMVAARDENGAPTRLIGT 233 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNL 360 + QA DPLT LPN R +Q A + + +D Sbjct: 234 YIDISERKRAEEIIQQQANFDPLTKLPNRRLFLDRLDQQIAKCQRTGAALALLLIDLDEF 293 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + ++ R + +++ + + +L G E ++LS + ++ + Sbjct: 294 KEVNDTLGHDVGDVLLQEAARRISGCIRDTDTVARLGGDEFTVILSDLTGKAHVEEIAQK 353 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L S + + + G+ E + L+ + Sbjct: 354 LISRVAEPYYLREGVAHISASIGITLYPGDAEDMGELMKHADQAMYSAKRLGRNR-FCYF 412 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 + K++ L +R A++QG + QPI + + + +L + G++ Sbjct: 413 THALQEAAQKRLRLSRELRQAVNQGQFEAHFQPIVELASGRIQKAEALLRWHHPERGLVG 472 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRI 593 P +F+PL L V ++ + SVN+ PL + A R+ Sbjct: 473 PAEFIPLAEDTGLIEGVGDWVFREAVRRARVWRDRFGTDIQVSVNMSPLQFRSEG-AERV 531 Query: 594 IR---LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + +++EITE + + + G +IAIDDFGTGY Sbjct: 532 ESWLYHLEEMGVRGEQIVIEITENLLLHAHDEVTRQLFRFRDAGIQIAIDDFGTGYCTLS 591 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ D +KID FV+++ + D + ++I +A L V+AE VET+ Q+ LL Sbjct: 592 YLKQFPIDYLKIDRSFVRNLENDPNDVALSKAIIVMAHELGLKVIAEGVETEGQRRLLSD 651 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G + QGYL R P D Sbjct: 652 AGCDFAQGYLFARALPAED 670 >UniRef50_C3XA65 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3XA65_OXAFO Length = 999 Score = 662 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 101/586 (17%), Positives = 209/586 (35%), Gaps = 24/586 (4%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 + L ++I + M + R + LS A ++ Sbjct: 372 AWYILLLAFLVIVMTGLGMVFYMRHRHMQHKTERLRMELKQKALRQHYDYLSKYANDVII 431 Query: 227 LLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP--FLNLTWAVSTLCLLNYNQ 279 L+ + ++ + G V L+ F + L + Sbjct: 432 LMDGNGTMIEANDRSEKMFGKSRAEMIGQNIRCVFDLKDTSVFEEKWMELKLEKGLIFEA 491 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + + V+ + + +++R + A D ++ LPN R Sbjct: 492 YGKHTNGSIFPVEISSRVIETDGRLFVQFIIRDISEKKKAEEMVWRHANYDQISGLPNRR 551 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + +A + L +D+ + ++ G + ++ L ++E Sbjct: 552 MFTEKLFFETRKAQRSDASVALMFLDLDHFKDVNDTMGHGVGDCLLKEASDRLRVCVRET 611 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E +++S + ++ + + S + + F + Sbjct: 612 DTVARLGGDEFTVIVSDIDDFKDVERVAQCILDELSEPFTLEGQSVHISASIGITFFPQD 671 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L+ + + + K++ ++N + AL+ Sbjct: 672 AKDTHDLMKNADQAMYAAKSLGGNQ-YHYFTPSMQEAVQKRMHMINDLHVALENNQFETV 730 Query: 508 AQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + + + ++ G++ P F+PL L F V K + Sbjct: 731 FQPIIDLKTGDICRAEALIRWHHPVHGLINPASFVPLAEDTGLIQAFGDWVFLEAAKAAS 790 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRI-IRLFKRYHISPQAVILEITEEQAFSNAESS 623 + SVN+ P+ + I + K ++ P+A+++EITE E + Sbjct: 791 RWRKYVPDFQVSVNISPVQFKNEGIDTNVWFAHLKSLNLPPEAIVIEITEGLLLDIDEHT 850 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + L G +A+DDFGTGY++ LK+L D +KID +FVK++ T+ D ++ ++ Sbjct: 851 SNQLLALSDAGIEVALDDFGTGYSSLAYLKKLDIDYVKIDQMFVKNLTTSEEDRVLCEAM 910 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T +A ++V+AE VET Q +L Y QGY I P + Sbjct: 911 TVMAHKLDIAVIAEGVETLAQLRMLASFNCDYGQGYYISGPVNDEE 956 >UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30T73_SULDN Length = 707 Score = 662 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 110/576 (19%), Positives = 212/576 (36%), Gaps = 39/576 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPY 234 + I + + ++ +++ ++ Sbjct: 139 VVKSIGTVHDITERVEHEKELEIASN-----------VFKYSSDGIVITDKNNNIVSVNK 187 Query: 235 ENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + + GY + N+ ++ + L + + Y++ Sbjct: 188 SFEKLTGYSKEEIIGKNPKLLSSGWGDEEFYKNMWSSLLSNDLWRDELWDRKKDGSLYAI 247 Query: 292 AFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--- 345 + + V + M R ++ + H A D LT LPN + +Q E Sbjct: 248 EQTIICVRDKNQDIVNYIGMSRDITEAKNKEEKIHQLAFYDFLTKLPNAKLFQQEVEAYI 307 Query: 346 -----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + L +DN ++++ G + + I L ++ ++ + +L G E Sbjct: 308 KSTHYNNETFAILFLDLDNFKWVNDSLGHQIGDLLLIEIAAKLKEIISQDSIISRLGGDE 367 Query: 401 LLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +++ E + + N + I N +++ + + N E LL Sbjct: 368 FVILAP-YENLLTISQLANTILCSVKDPIKVQNREVNVSWSIGISLYPQNGENYNDLLKN 426 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 +S +M++ ++ L +R A+ L QP + Sbjct: 427 ADAAMYESKNRGKN-TFRYFNDMMNQDAMYRLELDTKLRYAITNNSFFLNYQPKYSFEHG 485 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GP 573 + G + ++ + D G + PDKF+P+ + + V++ L L Sbjct: 486 KTIGVEALIRWIDKDLGFIAPDKFIPIAEESSYINEIGSWVMKQALNDLKIINSKLSSPI 545 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 S+N+ L ++ L K I P V EITE N + + ++++ Sbjct: 546 SISINVSGKQLEHESFYDEARTLLKESGIEPSLVEFEITETSIMQNIDHVVDILKKIKML 605 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +I+IDDFGTGY++ LK+L D +KID F+K++ + IV +I LAK+ L+ Sbjct: 606 GVKISIDDFGTGYSSMSYLKKLPIDTLKIDREFIKELEIDEDSKSIVNAIIALAKSFKLT 665 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VE ++Q+ +L L QGYL RP L D Sbjct: 666 TVAEGVENEEQKLILDGLNCDMTQGYLYSRPLSLDD 701 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 662 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 108/601 (17%), Positives = 215/601 (35%), Gaps = 26/601 (4%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 I+ + ++ + + L L + L + + A Sbjct: 255 IAPWRLASETLMALCFSLLLGYLAYLLVQLQRRKLSLQTAVSEQTRELVNARAQLQATLD 314 Query: 213 RA-FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST 271 L + + + + T + + ++ + Sbjct: 315 AIPDLLFEVGSDGI-IYQFHTRRPELLLVPPEAFIGKAFSEFMPDEVNQVIWSAMEEADA 373 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALT 328 L+ +A + + R + R + A Sbjct: 374 TGFSEGKYYALEMPGGRRDFELSVASKAGKEKGIQRYVMLSRDITERKENEARINNLAFF 433 Query: 329 DPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN R L+ E + + +D+ + ++ + G + + ++ Sbjct: 434 DPLTQLPNRRLLQDRLEHAIATGQRQAALGALLYIDLDDFKTLNDNRGHHVGDLLLIAVA 493 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV-----NILNS---RQIHWNNTG 432 L ++ + + +L G E L++L G + + + + Sbjct: 494 DRLRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQAAQQVQQIAEKILQSLNQVYVLDEQE 553 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 F + ++ LL + + A L + + ++ L Sbjct: 554 YFNSPSIGICLFGDDDADIEDLLKRADQAMYHAKAAGRN-TLRFFDPHMQASAAQRFALQ 612 Query: 493 NTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 N IR AL LY QP + G + ++ L + G+++P F+P+ + L Sbjct: 613 NEIREALLFNQFKLYYQPQVDRTGRITGAEALIRWLHPERGMISPMDFIPIAEESGLILP 672 Query: 551 FDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 +L++ + L + S+N+ Q + +++ R +P + Sbjct: 673 LGNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQQPDFVTQVLAAVTRTGANPHQLT 732 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LE+TE +N + + ++ L G + ++DDFGTGY++ LKRL + +KID FV Sbjct: 733 LELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLPINELKIDKSFVN 792 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DI+T+ DA I R + LA++ L+V+AE VETQ+Q+ L + G + QGY G+P Sbjct: 793 DILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQGYYFGKPVGAE 852 Query: 729 D 729 + Sbjct: 853 E 853 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 662 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 124/745 (16%), Positives = 233/745 (31%), Gaps = 40/745 (5%) Query: 17 AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPV-LCGMFCTN 75 + V + R ++ S+ + L +L+ + P + Sbjct: 344 PLSFPVAGEAIERALATGQPAASARMRLVQEHGEQHAVVLYQAVFASSPPAPVRAPLGVV 403 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + L AV + L + L Q W + Sbjct: 404 SAALGMDDLLAAVSRQA---AAQGIAVRLSDRDAGPESALLAGDDRGQESVWPEEILART 460 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + + L + + + ++ VL ML L + Sbjct: 461 ----TSIDFAGRRWELHTRALPRYIEQLRSWAAWGTIAVGVLTSAMLGALLLITTGNRRR 516 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 Q L A R + + L + G + Sbjct: 517 IQALVEHRTAELQAASVRLHENRAALIDAQRIARLGSWETLCARDGLHASDELHLLLDST 576 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGV----------------ETEYSLAFILAVLI 299 +L A++ + + Sbjct: 577 AGDLNSLADLIDAIAPASRAALTDALERAATEPGRIMLDCNTDSLPMRTLQFRIEGEHVG 636 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKS 351 + + R A DPLT L N A L A + + Sbjct: 637 GRLRRIRGTAQDVTALREAEARIRYLARFDPLTGLLNRSAWQDHAQDVLRHAARHDDRCA 696 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ G + + L ++ + + ++ G E +++LS Sbjct: 697 VLFLDLDDFKTVNDSLGHAAGDRLLAQVACRLGGCVRAEDLVARIGGDEFVILLSRLAHA 756 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + +R + ++ L +G + + + LL ++ Sbjct: 757 EEPARVAERVLDALARPLQIDSQPLRVGASIGIALYPADGGEIDTLLKHADTAMYEAKES 816 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 A ++ + T+++ +R A++ GDL L+ QP + G + ++ Sbjct: 817 GRN-AYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEALVRW 875 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 + G++ PD+F+P Q L VL +VN+ L Sbjct: 876 QHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNISALQF 935 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 +++ + R+ P + LEITE + + +QL G +A+DDFGT Sbjct: 936 RRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQLVALGLTLALDDFGT 995 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL +KID FV + N DA I + LA+ + VVAE VET+ Q Sbjct: 996 GYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQ 1055 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L K G + +QGYL RP + + Sbjct: 1056 RGYLCKRGCRAMQGYLFSRPLGVEE 1080 >UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodocyclaceae RepID=Q47C60_DECAR Length = 714 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 121/620 (19%), Positives = 206/620 (33%), Gaps = 39/620 (6%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 L I D V + + I Sbjct: 91 AAVRGTILAALETGSRYSIEYRIVCRDGEEKWVQERGVGLRDEAGRQVLEGYLEDITDRV 150 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFI 249 AQI E R ++ + + + L + GY P I Sbjct: 151 QAQI-------QLTETELRYRSIFENSVVGMFQSTESGRYLAANPALARLYGYSTPEALI 203 Query: 250 IFTLGVG-------KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + R F L + + +A + S Sbjct: 204 SSLADIASGLYVDPQRREDFKQLIQRDGRVTNFESEITCR--DGSRIWIAEHAHAVRSAD 261 Query: 303 VCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKS 351 L V QA DPLT LPN LE Q + + Sbjct: 262 GSFLYYEGTVEDITERHRYQSVLQHQATHDPLTGLPNRNLLEDRLAQAVQLARRKSSKVA 321 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G + I L ++ + + + G E +L+L + Sbjct: 322 LAFVDLDNFKVINDSLGHAAGDQLLIEISSRLRAALRGLDTVARYGGDEFVLILGEQTSM 381 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 H++ + + GL + F + + L LL + Sbjct: 382 ADTMHLLERVLVSIQAPLALEGHGLRINCSIGVSVFPDDAQDLDGLLRVADVAMYHAKES 441 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARL 526 ++ + L + +A++ +L + QP + E G++ ++ Sbjct: 442 GKGQ-YCFYTRDLNQAAQDRFSLETALGSAIENNELTVVYQPKVDGEGMVRGFEALVRWN 500 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLL 585 G++TPD+F+PL + QVL + + A P D + +VNL L Sbjct: 501 SAGRGLVTPDRFIPLAEETGQILAIGEQVLYAACRTAANWPLIDGQALSVAVNLSARQLR 560 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + + G + + P+ + LE+TE + E ++ ++ + G RIA+DDFGTG Sbjct: 561 EPGLPGLVADALAVSGLPPECLELEVTESMIMGDMEHNIRVLKSIKALGVRIAVDDFGTG 620 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L+RL D +KID FV I +I L K L +VAE VET +++ Sbjct: 621 YSSLAYLQRLPIDTLKIDRSFVSGCNRGGKAMAIPHAIIFLGKTLDLHIVAEGVETDEER 680 Query: 706 ALLHKLGVQYLQGYLIGRPQ 725 A+L G QGYL RP Sbjct: 681 AILAVCGCNEFQGYLFSRPL 700 Score = 46.1 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 22/103 (21%), Gaps = 8/103 (7%) Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN------LTWAVSTLCLLNYNQNF 281 LL + G+ + L +P + A+ T + Sbjct: 54 TLLSVSPGCHELTGFRADDLVGKQQNSLESLAHPEDRAAVRGTILAALETGSRYSIEYRI 113 Query: 282 LQGVETEYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRW 322 + E + L + + + + Sbjct: 114 VCRDGEEKWVQERGVGLRDEAGRQVLEGYLEDITDRVQAQIQL 156 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 94/440 (21%), Positives = 174/440 (39%), Gaps = 19/440 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 +L + R A DPLT LPN Q + Sbjct: 568 NILATAID---RKTTEERLTYLAQFDPLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFA 624 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + L ++ + + +L G E L+LS Sbjct: 625 DLDRFKIVNDTMGHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDAT 684 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + + + G+ LL Q+ Sbjct: 685 LIAEKVISALQVPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQGPA- 743 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYD 529 ++ + ++ + +R AL + + +L+ QP N E G++ +L Sbjct: 744 IYQFYLPQMNERAVARLKIETQLRGALARREFVLHYQPKASLINGEITGFEALLRWQHPA 803 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G++ P +F+ ++ L V++++ + + ++NL Q++ Sbjct: 804 HGLVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSARQFQQQD 863 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + +I P+ + E+TE AE + ++ L FG +I++DDFGTGY++ Sbjct: 864 LDSIIGETLRATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYSS 923 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR D++KID F++D+ T+ DA I ++ LA + L VVAE VET+ Q L Sbjct: 924 LAYLKRFPLDVLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEFL 983 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 + G +QGY +P PL Sbjct: 984 IRHGCDEMQGYYFSQPLPLE 1003 >UniRef50_C6BM04 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Burkholderiaceae RepID=C6BM04_RALP1 Length = 902 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 110/635 (17%), Positives = 222/635 (34%), Gaps = 39/635 (6%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 ++ +RL V IG+ + + P + L + Sbjct: 271 VSGTDGVERLLGYHHVPEIGLYFLVGESIASILAPY----------EAYRRTALAGAIGS 320 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 L+ +L+ L R + R + ++ Sbjct: 321 TLLMALLYATLRRSMSQRKQHIDEMRLASLVYASSSEAMMV---TTLDGTVI---DVNPA 374 Query: 236 NDFIAGYLVPVFFIIFTLGVGK---LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 GY F + + + AV+T + + TE+ Sbjct: 375 FTVTTGYTAQEFKGQHSDAIRSECNDSAVVDTMRTAVTTKGTWSGEYLIRRKDGTEFPAL 434 Query: 293 FILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--- 346 + + + ++ + QA D LT LPN Q Sbjct: 435 LTVDTFAGHKLGAPSRVALIHDITEKKRAEEVIWRQANFDTLTELPNRHMFYAKLRQEIL 494 Query: 347 -----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G ++ I R + +++ + + +L G E Sbjct: 495 HARQAATAVALLFIDLDRFKEVNDTLGHDQGDVLLKEIARRISAIVRGTDTVARLGGDEF 554 Query: 402 LLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++L G ++ L +R + +++ + + + + LL + Sbjct: 555 TIILPNLPDAGAAAPIIRSLLARIATPVQLGEESVEVTASIGLALYPRDADNAESLLVRA 614 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--- 515 + + + +++ + + +R A++Q L ++ QPI + Sbjct: 615 DQAMFAAKSAGRNQ-WSVFTPALQRAEQERLRITSDLRIAIEQKQLAVHYQPIVDLRSGA 673 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPR 574 + ++ G + P F+P+ + L + VL L + + + Sbjct: 674 INKAEALIRWTHPVRGEIEPADFIPVAEETGLIVQIGKWVLNEALTEVTRWHTVLGRHMQ 733 Query: 575 FSVNLMPLTLLQKN-IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 SVN P+ + + KR I P ++++EITE + + ++ +L + Sbjct: 734 VSVNKSPVEFRAAGQLGDSWADVVKRRAIRPGSLVIEITEGALMEGSAEVVDHLTRLRQA 793 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G IA+DDFGTGY++ LKR D IKID FV+ + + D + +I +A A + Sbjct: 794 GIEIALDDFGTGYSSLSYLKRFDIDYIKIDQSFVRSLAHDPKDIALCSAIVSMAHALRIK 853 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE +ET++Q+A+L G Y QG+L P P A Sbjct: 854 VIAEGIETEEQKAILVAAGCDYGQGHLFCPPVPPA 888 >UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDV9_DESAH Length = 708 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 102/602 (16%), Positives = 214/602 (35%), Gaps = 38/602 (6%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + F A I ++ Y + ++ A + + +K A +W Sbjct: 100 ARAFEAGANDFIAKPINWVMLGYRAKYMLRAGQAFRELYLNENRLIKTQKLAKLGNWQID 159 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW-----AVSTLCLLNY 277 L + E + G + F + ++ AV + Sbjct: 160 LVNNVFSCS--PEACSLQGLNPMDKPVTFDGFFEPIIANQQDMVKQTISNAVKAKENFSL 217 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 N + T+ + V + + +L +V+ + + R A D LT L Sbjct: 218 NYQVMNLNGTQKHILNQGEVFVDDNGVPEIMLGVVQDLSQLKQAEERIRFLAFYDGLTGL 277 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N + L +D + ++ G + ++++ TL Sbjct: 278 ANRMLFMDRLDTQIKKATRYNQKFALFFLDLDQFKKINDTLGHHIGDLLLKTVAETLKSC 337 Query: 387 MQENEK------------LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT 431 +++ + + +L G E ++LS ++ + + Sbjct: 338 IRKTDTAARRDKDESGSMIARLGGDEFTVLLSDIKSPENSAIIAQRILDAIPEAYSIEGK 397 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + F + T + LL + E ++ ++ + Sbjct: 398 EVSVTTSIGISVFPADGSTPETLLKNADSAMYHAKDRGKN-NYQFYMESLNRAAIERFSM 456 Query: 492 LNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 ++ + + +L+LY QP +++ G + ++ + G++ PDKF+PL + L Sbjct: 457 ERDLKKSFARDELVLYYQPQIRFADRKIVGAEALIRWIHPHKGMIPPDKFIPLAEETGLV 516 Query: 549 ARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 + VL++ + R ++NL L +NI I K + + Sbjct: 517 IDINKWVLKTASRQNDEWTRAGLNSIRVAMNLSGYKLATQNIIQDIKEALKTVKFDSKKL 576 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE + + +M +Q+ + IA+DDFGTGY++ L + IKID F+ Sbjct: 577 ELEITENILMQDDDETMQIFQQIREMNISIALDDFGTGYSSLSYLTSFPVNTIKIDRSFI 636 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + +I+++I + + +++AE +ET++Q LL + G QGY + P P Sbjct: 637 MGSALQVDNRVIIKAIIAMGHSLGKTIIAEGIETKEQFDLLKRYGCDEAQGYYLSPPIPA 696 Query: 728 AD 729 + Sbjct: 697 DE 698 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 107/577 (18%), Positives = 198/577 (34%), Gaps = 30/577 (5%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + +R ++ + + L + LS + + Sbjct: 121 VNYIFRSSRAFRDLRTSEARLSKAQQLARMGSWEWNPLLDVVQLSEPCRQIMGIDSATQV 180 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-LAVL 298 + + + LG LR L L L + + L Sbjct: 181 -RDIASLIALAHPLGRPYLRKGLDALMERGRPLSLDCQTATADEEDKRFIHLEAEEHRDA 239 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGK 350 + ++ + + A D LT LPN ++ + Sbjct: 240 SGRITLVSGTIQDITSRKLAEEKIRYLAYYDSLTGLPNRVLFKEHLRRALATSEQHKRQL 299 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL------------YQLPG 398 + L +D + ++ G ++ + L ++ + + +L G Sbjct: 300 AIMLLDLDRFKGINDSLGHDAGDLLLQQVADRLRLRVRPYDTVSRDSEEQRDSLIARLGG 359 Query: 399 SELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++L G T + + N + + + + L+ L+ Sbjct: 360 DEFTILLEGITTPEAAARVARRVIEALEAPFALNGNEVFISCSIGISIYPHDGTDLEILV 419 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 + + ++ + ++++L +R A ++ + L+ QP + Sbjct: 420 KNADVAMYCAKDLGC-STFQFYTQEMNSVSLQRLILETHLRKAFEKEEFFLHYQPQIDCV 478 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 G + + + G+++P F+PL + L D VL ++ K L Sbjct: 479 TNRIIGLEALARWNNPELGLVSPGSFIPLAEETGLIIALDRWVLATVCKQLEAWQAAGIP 538 Query: 573 P-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R +VNL L+ N+ I ++ R + + LEITE NAE + + L Sbjct: 539 LVRVAVNLSARHFLKANLNKTIQQIRSRGAAARDHLDLEITEGMLMENAEEVVSVLGMLQ 598 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G I+IDDFGTGY++ L RL +KID F+ N A +V +I LA + Sbjct: 599 ETGVNISIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQSGDNVESASVVTAIIALAHSLG 658 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET Q L + G + +QGYL RP P Sbjct: 659 KEVVAEGVETSTQLQFLKENGCRVIQGYLFSRPLPED 695 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 125/728 (17%), Positives = 226/728 (31%), Gaps = 45/728 (6%) Query: 43 FLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN---LWNFHLSFLQTAVMLGSQTFVVLC 99 L L+ L + L + L + + Sbjct: 95 LLRAADGQAHLAELMQRLAALLRQRLAAQAPGAPNPSARMLALLQEQRAALQATLASISQ 154 Query: 100 ACA-------ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLK 152 I + L + R L + + Sbjct: 155 GIFKTGPDGRISVYNQRALDLLDLPESLLANRPTLAELTRLQAERGDFGPDYGLVGPLGQ 214 Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 G D+ + + L + + + R E Sbjct: 215 DYLAQGGRDSAPAIYWRTTRDGRTLEVRTNALADGSQVRTFA-DVSDYLRVENQLRDSEA 273 Query: 213 RAFTLSWLAALSVLLLLLCTPYENDF----IAGYLVPVFFIIFTL----GVGKLRYPFLN 264 R +LS L++ + + G + + Sbjct: 274 RFRSLSDLSSDWYWEHDAQGRFTQLAGDLSVNGMPLSAVLGRTRWEIGALNMTEADWAAH 333 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRR 321 + + + + + ++ + + R + + Sbjct: 334 RAVLAAQQPFRDLELQRRRADGSMHWISVSGVPVQGADGTPRGYRGVGRDITGRKQAEGQ 393 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRV 373 A D LT LPN R L + + + +DN + ++ G Sbjct: 394 IERLAFYDALTGLPNRRLLLDRLQHATVAVTRSNTQGALLFIDLDNFKSLNDTLGHDAGD 453 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ---------HMVNILNSR 424 H ++ + L ++E + + + G E +++L+G H+ + Sbjct: 454 HLLQQAAQRLKACVREVDTVARFGGDEFVVLLAGLSAAAAQASAEAAQVAKHIAAS-LGQ 512 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 F + LL Q Q+ A + + Sbjct: 513 PYALGGAVHHSTPSIGIALFGPQACRVDELLKQADLAMYQAKAAGRNTQ-RFFDPEMQAA 571 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLI 542 + + L +R L Q +L+L+ QP+ + +G + ++ G+M P +F PL Sbjct: 572 ASHRSALEADLRRGLQQRELVLHYQPMVDGQGRLQGAEALVRWNHPQRGLMPPAEFTPLA 631 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 Q L VLE+ L SVN+ Q + +++ + Sbjct: 632 EQTGLILPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQFRQADFVQQLLATLEAS 691 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 +P+ + +E+TE ++ + + ++QL G A+DDFGTGY++ +LKRL D I Sbjct: 692 GANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGYSSLSQLKRLPLDQI 751 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+D+ + D IVRSI LA++ L+VVAE VET+ Q L G Q QGY Sbjct: 752 KIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLEFLQHHGCQTFQGYH 811 Query: 721 IGRPQPLA 728 GRP P Sbjct: 812 FGRPMPPE 819 >UniRef50_C4WM42 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WM42_9RHIZ Length = 803 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 107/743 (14%), Positives = 243/743 (32%), Gaps = 45/743 (6%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + ++ F + ++ A + S+ + L + L Sbjct: 68 LAISAFAGGVGVWATHFVAMLAYSGTVAIEFDFTATVLSAATAVLGFWLSLHLLKGAALK 127 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 + + + + + +S ++ A + + AI L + + +T+ Sbjct: 128 YALMAAISATLSIAAMHFTGMSAIKAAADIHYDLPPIFVGGAISVLILLAAFWF-VTNAS 186 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADA---IFTVVDLLSLFTAVL 177 W R+ + + + + + + + D ++ VV + ++ +V Sbjct: 187 GWSRILLPTVGGILAVCTLHFTAVASTELVPNPTLPAADPLGIGRLWLVVAIAAVVCSVA 246 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 + + ++ R + G + ++ Sbjct: 247 LATISAVFIDRYMTD--------------LKGFANATLDGLAVIRDGGIV---EMNARFS 289 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + I + + E + LA Sbjct: 290 ELMRRSEKSLMGIEPDTLLLAADGLPVCARRAEAIEAAPR----FPNDERIFELAVHAIE 345 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------AGKS 351 +L + R R+ A D LT LPN E+ + Sbjct: 346 YQGRPCEVLAV-RDLTEKRAAQRQIEHMARHDALTDLPNRMFFEERLANAVARPSREPFA 404 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ +G ++++ L + + ++ G E +++ G Sbjct: 405 VLALDLDRFKAVNDIFGHAEGDRVLKTVSSILKRCVNGIDTAARIGGDEFIILQVGVPQP 464 Query: 412 GRLQHMVNILNSRQIHWNNTGL----DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + +G + + + + + ++ Sbjct: 465 RGARKLSEKILEA-FRLELNTVLDPTAVGVSIGVALYPNDGKDAEAIRHAADIALYRAKT 523 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 L + + ++ L +R A+ +G + + QP+ + GY+ ++ Sbjct: 524 EGRGL-FAFYSPEMDQEIRERRQLEADLRHAMVRGQIGIAYQPLFATSDGRCTGYEALVR 582 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G + PD F+P+ + VL + A +VNL P+ Sbjct: 583 WNHPERGQIPPDVFIPIAEETGTIVALGEWVLREACRTAAEWES---HLSIAVNLSPVQF 639 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++ + + + P + LE+TE + +++ + ++ K G RI +DDFGT Sbjct: 640 RLVSLPDTVRSVIAETGLDPTRLELEVTESALMKDRLTTLELLRRMKKSGVRIVMDDFGT 699 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+ D IKID F+ + T+ IVR+I L ++ L VVAE +ET Q Sbjct: 700 GYSSLSNLQSFPFDKIKIDRSFITSMETDVSARAIVRAIVGLGRSLDLPVVAEGIETFDQ 759 Query: 705 QALLHKLGVQYLQGYLIGRPQPL 727 ++ + G + +QG+L GRP Sbjct: 760 HRMVIEEGCEQVQGFLFGRPANA 782 >UniRef50_D1B584 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B584_SULD5 Length = 961 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 101/599 (16%), Positives = 217/599 (36%), Gaps = 41/599 (6%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 + ++SL LI M+F ++ + + ++ TL +A + Sbjct: 352 LVIISLVIMCLIIVMMFLISVKLRSLLARYENHLLLNNKQIKEQKMVFETLYQKSADGIW 411 Query: 227 LLLLCTPYENDFIAGY-------------LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 LL + + + F + S Sbjct: 412 LLKEGLFIDCNEAIMKMFKTTDKQKLINVSLADLSPEFQPDGQSSYEKSRWMNSIASKEG 471 Query: 274 LLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRR-------WH 323 + + T ++ ++ + +R + L Sbjct: 472 VHKFEWYAKACDGTLIWISVVMTTVMMNKGKIQH--CSIRDITARKALEEENKKQKKLLM 529 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 Q D LT LPN L+ + +D + ++ G Sbjct: 530 HQVEHDILTGLPNRNLLQDRLTQAIKKASRDGKVLGVMFVDVDKFKNINDSLGHDAGDML 589 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTG 432 +++I + + ++E + + +L G E +++L G + + + L + N Sbjct: 590 LKTIAKRMQHSIRETDTVARLSGDEFIVLLDGCKDVNDIFVAIKKLINAFQEPFIFGNES 649 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + E LL ++ + ++ ++ +T + + + Sbjct: 650 FKVTMSIGVSVYPNDGELASKLLKNADIAMYKAKSQGRNR-YIFFDQEMNQETNEHLEVE 708 Query: 493 NTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 ++ AL + +L+ QP N + G++ +L G+ P F+ + + L Sbjct: 709 KSLHKALVNQEFVLHYQPQVNLKSGKIIGFEALLRWKHPKRGLTAPGYFIHVAEESELII 768 Query: 550 RFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 V++ +++ L + ++N+ L ++ I++ K P+ + Sbjct: 769 EIGNWVIKEVMRQLKEWHDKGLRPGKVAINIAGKQLESNHLIAFILQNLKESGCRPEWIE 828 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEI E +A S+ +++ + G I+IDDFGTG+++ LK L +KID FV+ Sbjct: 829 LEIVERFIMKDATKSIALLKRFRELGLDISIDDFGTGHSSLAYLKELPITKLKIDQSFVQ 888 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++ ++ D I R+I +L + L V+AE VET+ Q+ L+H G +QGY+ +P Sbjct: 889 NLENSSEDRAIARTIIELGRGLGLVVLAEGVETKAQKELIHSSGCDLIQGYVFSKPVDA 947 >UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIT7_9PROT Length = 794 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 112/632 (17%), Positives = 225/632 (35%), Gaps = 27/632 (4%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA------DAIFTVVDLLSLFTAVL 177 + + I +L+ + +++ F D F V + T Sbjct: 152 WFIGGVSIFGLAIALLGFLLYNSLKRLSVLASSFERFNPNRPKDFHFNVQTNDEIGTINR 211 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYE 235 N++ LT+ I + + A ++ A SW LLL Sbjct: 212 SANIMVQKLTKYIDNTQKLNDTILQKEAHLKEAQRIAKVGSWEYNVIDGSLLLSDEVYRI 271 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI- 294 G + + + + A+ N + + E + Sbjct: 272 LGVKFGTAITWKDFLDFISKDDYDNVVKVIEDAIKHGSKFNIKYALILKSKNEIYVQTRG 331 Query: 295 -LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + V + + + A D LT L N L+ Sbjct: 332 KVRKKAGGMVRITAVSMDITNDIKNKKTIEKLAYYDSLTGLANRTLLKDRMHKAIQYAKR 391 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 ++ + L +D+ + ++ G + + I L ++E++ L +L G E +++L Sbjct: 392 EQTNLAVMFLDLDHFKLINDTLGHSVGDDMLIHIAEILKIHIRESDTLSRLGGDEFVILL 451 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 ++ Q++ + + + + L + + + + + L+ Sbjct: 452 PSVKSIFDAQNIASKIQHTLQSKHDIGDHQLYITSSIGVSLYPDHGDNSEELIRNADTAM 511 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD-LLLYAQPIRNKE---GEG 518 ++ + + +Q+ L + A+ + ++ Q + E G Sbjct: 512 YEAKNSGRN-NYRIYSQSMGNYVDQQLHLEQDLIQAVKHKAGIEVFYQAKIDSENNFISG 570 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + + G++ PD+F+ + L ++E + L G + ++ Sbjct: 571 AEALARWRHPTNGLIFPDQFIHIAESTGLMIELGNIIIEESIFQLQEWNKLGLVGLKIAI 630 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL N+ I + Y +SP V EITE + +N +++ + +L G I Sbjct: 631 NLSARQFQDPNLVSFISSMLHNYQVSPSQVEFEITETLSMTNMTNTLRILTELKAIGVSI 690 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTG+++ LK+ + +KID FV DI+ + D IV++I +A + + VAE Sbjct: 691 AIDDFGTGHSSLAYLKKFPINTLKIDRSFVLDIIEDDDDKTIVQTIVSMAHSLGFNTVAE 750 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET + ALL +G LQGY +P P + Sbjct: 751 GVETLEHVALLKTMGCDQLQGYYFSKPIPKDE 782 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 111/627 (17%), Positives = 213/627 (33%), Gaps = 37/627 (5%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + L+ F + + + F L N + R+ V+ Sbjct: 204 VGLLIPGVLGKSGQLETERFLDIRAEVVGRRKIGASFPLELSLNAMELGGQRLFVAIAHD 263 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + +++ TL V + + + + + G Sbjct: 264 ITERKAAEEELRKQKEWLSTLINAMPDLVCFKDGKGKW--LVANKFYLDIAGLDHVDYHG 321 Query: 257 KLRYPFLNLTW---------AVSTLCLLN------YNQNFLQGVETEYSLAFILAVLISF 301 + +++ ++S Y + I L Sbjct: 322 RTSADLAHMSRGFGEFMLTGSLSDERAWQEKKPVAYEKELPTPDGGAKVFDVIKIPLYEE 381 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 L+ + R + R H A D LT LPN ++ Sbjct: 382 DGARRGLVMVGRDVTERKLAAARIHHLAHHDSLTGLPNRVLFQERLRTALAQAKRLGHKV 441 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G + ++++ + LL ++E + + +L G E +VL+ + Sbjct: 442 ALMFLDLDKFKDINDTLGHHLGDLLLKAVAKRLLRCVRETDTVARLGGDEFAVVLTNLDD 501 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++ + S + ++ F + + LL +S A Sbjct: 502 PEGASNVAESIIASISEPFGLDEHEVNTSTSIGITIFPDDAVDSEVLLKNADLAMFRSKA 561 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + + + ++ + +R AL L ++ QP+ E G + ++ Sbjct: 562 EGRN-NYHFYVAEMDAEIQARKVVEHDLRVALGTDQLEMHYQPLIEMKTGEVVGCEALIR 620 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 G ++P +F+P+ + +L +L P + +VNL P+ Sbjct: 621 WKHPTRGWVSPVEFIPIAERTDLIVPLGRWILHRSCLQGRDWARAGLPPQKIAVNLSPVQ 680 Query: 584 LLQKN-IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + I + + P + LEITE A N E+++ + QL G I+IDDF Sbjct: 681 FKNHTALLAMIADILDQTGFPPDQLQLEITEGIAMQNVEATVDVLRQLRDMGVLISIDDF 740 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID FV DI + +A +V +I L + V E VET Sbjct: 741 GTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVNAIVTLGHSLGTRVNVEGVETI 800 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L GV QG+ + P + Sbjct: 801 EQLDFLKAHGVDEAQGFYFAKALPPDE 827 >UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=Q2BCE5_9BACI Length = 744 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 95/544 (17%), Positives = 192/544 (35%), Gaps = 25/544 (4%) Query: 207 SLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 E R L L+ + ++ ++ + G + + + Sbjct: 194 RQESEDRYRGLVELSPDFIGVISGNVIVYINEAGCRLIGASSKEQLLGKPIINFVNKEAT 253 Query: 263 LNLTWAVSTL-----CLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSE 316 + + + + + + + + R + Sbjct: 254 FEIYNTLLAADSDTAGKRRFEVQAKRLDGVLVDVEVSSMPIRYGGREAVQVIGRDITERK 313 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ-----EAGKSFCCLRIDNLEFMSRHYGLMM 371 R A D LT LPN + + + + + L +D + ++ G Sbjct: 314 KSERTMEYMAFYDTLTGLPNRNEIMKQLQGILNSGKEKAAVLFLDLDRFKIINDTKGHST 373 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 ++ L + + + G E +++ + + +++ + + Sbjct: 374 GDLLLKKAGIRLEDTVGSLGLVARQGGDEFIILFEE-KEKQQIEGAARAIIEQFNKPFIL 432 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + + + L+ + + G +++ Sbjct: 433 EGEEFYITPSIGISLYPEHGTDQETLIKHADTAMYLAKERGKN-NFQFYTSSLEGLASRK 491 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L N +R ALD+G+LLL+ QP + + +G + ++ + DG ++ P +F+PL + Sbjct: 492 MALENGLRKALDRGELLLHYQPQIDLKTGKLKGTEALVRWQRPDGHLVPPGEFIPLAEET 551 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L +L + + + G +VN+ L + + I P Sbjct: 552 GLIVPMGKWILRTACEQHKRWKLEGAGSVPIAVNISVRQLEDPEFIMYVKTVLSSCDIEP 611 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE N E + + +L K G R++IDDFG GY++ LK L D IKID Sbjct: 612 GCLELEITES-IMQNIEKATIALNELKKIGIRLSIDDFGKGYSSLSYLKHLPIDTIKIDK 670 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV DI+ + +V++I D+ + SVVAE +E ++Q L + QGY RP Sbjct: 671 SFVDDILDPAQNGSLVKAIIDMGLNLNFSVVAEGIEHKEQAEFLLENNCPVGQGYYFSRP 730 Query: 725 QPLA 728 Sbjct: 731 VTGE 734 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 109/676 (16%), Positives = 203/676 (30%), Gaps = 31/676 (4%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 L +++ + + + V Sbjct: 128 LVAELRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAGIHDWMVREVL 187 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + + + V L I Y R I Sbjct: 188 DAEGYAARLQAIAQNPLLEASDLLTLRQGRVLERVTLPQYARGRPIGR---VYAFRDITQ 244 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 + + + ++ + + G Sbjct: 245 RLHDEQGLKLAARVFEAS---LDAIFVTDPE---FRIVAVNPAGERMTGLAGAELVGQRL 298 Query: 253 LGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 +L ++ A+ + + L ++ + Sbjct: 299 DRSLRLWANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGLPFHYV 358 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 V+ + +R A D LT LPN L + + + + ID Sbjct: 359 GFVKDLSETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFAVLFIDID 418 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + + + + + ++ + + +L G E +L+L E+ + + Sbjct: 419 RFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHRVES-HGAELVA 477 Query: 419 NILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L ++ + + + + ETL L+ H Sbjct: 478 RRLLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHVKEHGRGDC-C 536 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + ++ ++V + + +R AL QG L QP + G + ++ D G Sbjct: 537 FYQRQMNVGLLERVRIDHAMREALQQGHFWLAYQPQIDLVSGLVIGAEALVRWNDPDLGE 596 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGR 592 + P +F+P+ + VL ++ A SVN+ Q N Sbjct: 597 LAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIRLSLSVNVSATQFHQANFIDL 656 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + P + LE+TE N E ++ +E L G R+AIDDFGTGY++ L Sbjct: 657 LAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDFGTGYSSLAYL 716 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KR +KID FV DI + D I ++ LA L V+AE VET Q+ L G Sbjct: 717 KRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETDIQRQFLLDAG 776 Query: 713 VQYLQGYLIGRPQPLA 728 QGYL A Sbjct: 777 CHEFQGYLCAPALEPA 792 >UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Tax=Caulobacter RepID=Y091_CAUCR Length = 809 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 128/748 (17%), Positives = 241/748 (32%), Gaps = 40/748 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + L+ ++ F V L SP + S I +M ++ Sbjct: 57 LLLTGLVAGSSVWATHFIAMVAFTPGLKTGYSPTGTLLSLMIAALFMASGFAVAS----A 112 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 R G L + ++ + + V A + LG Sbjct: 113 QRSTTNDFAGGVLIGLGVAAMHYMGMSAFVTQGQLVWEHATVGMSAVLGVGGATAALLLA 172 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 R V + +V F I+ + + + + T + Sbjct: 173 GTARTIRRQAVGGGMLCLG--IVMLHFTGMSAITIVPDASLTVPDQLLSGGMLTLAVGSI 230 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 L + +Q L + + + Sbjct: 231 TSMIILGGLGAVAIESQTSRSALERIRRLANAAYEGLV----VVQSGRINDANAAFCDLV 286 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 G + G V L E + ++ Sbjct: 287 GAPLAELVGRPLFGEILTFDEADPSREDVRREGRLRPLV-----GGREIPVEVFSRLMDD 341 Query: 301 FS-----VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + + VR + A D LT L N +L+ Sbjct: 342 GARVETSGLTVLAVRDLRERRAAEEKIRYLAEHDGLTGLLNRNSLQMRLAAAIDRVEASG 401 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV-LS 406 + C+ +D+ + + +G + + R L +Q +L G E ++V ++ Sbjct: 402 ESLAVICIDLDHFKEANDQHGHLAGDALLVETARRLQSAVQAPSFAARLGGDEFIVVQIA 461 Query: 407 GPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 G + + L + + ++ L MG + + T + L+ Sbjct: 462 GGDQPAVAAELAGRLIEMLAAPVPFDGQELAMGSSLGVSLYPDDGRTAEALMANADMALY 521 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 ++ + + ++ L +R + +L+++ QP+ + E G++ Sbjct: 522 RAKESGRG-VYRFFKREMDDTIRERRNLARDLRQGIADNELIVHYQPLARAADGEVCGFE 580 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ G++ P F+P+ + L VL A R +VNL Sbjct: 581 ALVRWKHPTRGMIPPLDFIPVAEENGLIEALGDWVLRRACADAAAWEK---PLRIAVNLS 637 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P+ L + + + +SP + LEITE F + + ++ N+ +L G RIA+D Sbjct: 638 PIQLHNPALPTLVHEVLITTGLSPSRLELEITESALFKDYQRALDNLRRLKALGVRIAMD 697 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ L+ D IKID FV++I + IVR++ L ++ + VVAE VE Sbjct: 698 DFGTGFSSLSTLQSFPFDKIKIDKSFVENIHRHDRATAIVRAVLGLGRSLEIPVVAEGVE 757 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T++Q L LQGY IGRP P+ Sbjct: 758 TEEQILFLRGEDCAELQGYAIGRPAPVD 785 >UniRef50_Q483V3 Sensory box/GGDEF/EAL domain protein n=5 Tax=Alteromonadales RepID=Q483V3_COLP3 Length = 692 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 104/554 (18%), Positives = 202/554 (36%), Gaps = 26/554 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT----PYENDFIAGYLVPVFFII-- 250 + + +L KE T+ L+ + + D Y+ P FI Sbjct: 131 LADVKHAQSQALFKEHMLETIFNAIPDLFFLMEVDGMIVDYHTGDQKNLYVAPHQFIGKR 190 Query: 251 --FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYM 308 L + ++ + ++ + ++ L ++ + Sbjct: 191 MTDLLPQEVVSKFQTHVDKILQQEGMITFEYELTMPHG-LVHFEARMSYLP-EYNQIVLI 248 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNL 360 +R QA D LT LPN + L +D+ Sbjct: 249 IRDISEQYKSAEIIRHQAYFDTLTSLPNRFLALDRLSQMLTEAERNNEKIAVLFLDLDDF 308 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + L +++E + + +L G E +++L G + Sbjct: 309 KKINDSLGHEIGDKVLIQSAHRLKQVLREGDTVGRLGGDEFIVLLRGVTENHDALVITEN 368 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L + L + N LL ++ Sbjct: 369 LLKSFREPFVIDGRELMLTLSIGVAISPENGRCASDLLRNADTAMYKAKDLGRN-TYSFF 427 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + ++ ++ + + AL++ + LY QP + ++ G + +L G +T Sbjct: 428 SKKMNTMMLRRFEVEEQMHGALERNEFELYYQPQFDVKKQKITGVEALLRWHNSVLGNVT 487 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI 593 PD+F+P+ L V++ L +L + +VNL P + G I Sbjct: 488 PDEFIPIAEHTGLIIPIGRFVIKQALGFLNKWQNIHQQKFTMAVNLSPCQFRDSTLLGFI 547 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ + + LEITE S + ++ + G ++++DDFGTGY++ L+ Sbjct: 548 KDSLSETNVIAEHLELEITEGVLMSGQSHIHDALVEISELGIKLSMDDFGTGYSSLSYLR 607 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D++KID F++ I N D +V +I +A + L+VVAE VET++Q LL +LG Sbjct: 608 QYAFDVLKIDQSFIRGIPLNKADCELVNTIIAMAHSLGLTVVAEGVETKEQLTLLEELGC 667 Query: 714 QYLQGYLIGRPQPL 727 +QGY +P P Sbjct: 668 DLVQGYYFSKPIPA 681 >UniRef50_Q220B0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B0_RHOFD Length = 701 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 114/695 (16%), Positives = 232/695 (33%), Gaps = 43/695 (6%) Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 G C N + + V +V ++ + L + + Sbjct: 5 GSLCANKGRILVVEDEMIVARDIAQQLVALGYQVVGHATRGQEAIDLAGALQPELVLMDI 64 Query: 130 LVTPI--GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 + GI + + F + I+ F D + I Sbjct: 65 QLAGAMDGIAAAQAIRLQFLLPVVFITAFAADEVLARAKLTEPF----GYILKPFSEREL 120 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGY 242 R ++ + + + + + + V+ L+ + GY Sbjct: 121 RTVLEMALYK---HQADSQARDAARHTQAILDGMVDGVITLNAQGLITSINQAVSTLFGY 177 Query: 243 LVPVFFIIFTLGVGKLRY------PFLNLTWAVSTLCLLNY-NQNFLQGVETEYSLAFIL 295 + + + + + + + + ++ + Sbjct: 178 APEELLGHNVAMLMPSPHRSLHGGYLRRHQHTGAGCAMGQGREVDGQRRDGSVFPISVSV 237 Query: 296 A-VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 + ++ + + +V + + A D LT LPN R L Sbjct: 238 SELMHNGQTQFIGLVHDITQRRRSEENIYRLAFYDKLTGLPNRRLLMDRLKQALITSTRT 297 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + L +D+ + ++ +GL ++ + + L +++++ + + G E +++L Sbjct: 298 GQHGALILLDLDHFKQINETFGLDAGDELLQQVGQRLPTCVRDDDTVSRFGGDEFMVMLE 357 Query: 407 GPETE-----GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++ + + + + ++ F Q +L LL Sbjct: 358 ALSSQPQEAAIQAEAIAQKILLALAQPYRLRGHTHGTTPSIGVVMFRQAQVSLDDLLKMT 417 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--G 516 Q+ A + + + + L +R L + +L+ Q + + Sbjct: 418 DVAMYQAKAAGRN-TVRFFDPALQALALARTALEENLRRGLALQEFVLHYQIQVDHQGLP 476 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPR 574 G + +L G++ P +F+PL + VLES + L Sbjct: 477 TGAEALLRWQHPVRGMVPPAQFIPLAEETGFILPLGQWVLESACRQLVAWSHQRATGSWT 536 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ L Q + + + +P + LE+TE + + + + L G Sbjct: 537 LAVNVSALQFAQPDFVAHVTSALQATSANPTLLKLELTESMLVGDVQDVITKMNALKAQG 596 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 A+DDFGTGY++ LKRL D +KID FV+D++ N DA+I ++I L L V Sbjct: 597 VSFALDDFGTGYSSLSYLKRLPLDQLKIDQSFVRDLLINPNDAVIAQTIVALGHNLGLQV 656 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET Q L +G QGY GRP P A+ Sbjct: 657 IAEGVETVGQHDYLASIGCDAFQGYYFGRPVPAAE 691 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 125/759 (16%), Positives = 248/759 (32%), Gaps = 41/759 (5%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR 62 + + + + + + + + ++ I +A + + +F Sbjct: 137 LSEEAVHGLDLTAMP--VPGFSRAVRQALAGDVGHFFGEIPVAGGTRQLGVRAVFAPLRT 194 Query: 63 GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW 122 V G+ + + + + + L + + + +R Sbjct: 195 PSGQVPRGVAILEDALDNPRWQDELLAGRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAE 254 Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 + + + ++ + + V++ LI Sbjct: 255 RMFGFSREEAIGQHAFFILPSEVRATLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEW 314 Query: 183 FYYLTRM-------IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LL 230 F + S + + + +L+ ++ Sbjct: 315 FNTTLVDSNGKSLGVTSLVLDITEKQAREDELRVAAQVY----EQSREGILITDAQHRIV 370 Query: 231 CTPYENDFIAGYLVPVFFIIFTLG----VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + GY F+ L + Q Sbjct: 371 MLNSRCCELTGYTQGEVVGTTPEWMFSESQVSTPGFVELCRHLDEQGGWAGELLLRQRNG 430 Query: 287 TEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + L + S + M + RR A D LT LPN L Sbjct: 431 QLFLAWLTLRTVRLGTSTYHVCMFGDLSDRQAAERRIQYLAYFDTLTGLPNRALLTDRAN 490 Query: 346 QEAGKS---------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 L ID+ + ++ G ++S+ + L ++E + + + Sbjct: 491 MALRGVEGDAAPALALLLLDIDHFKHINDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQ 550 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++L R + + R + + + Sbjct: 551 GGDEFVVLLPD-ANASRAASVAQEILRRLGFVCRIGEHDISVSVSIGIAMAPDDGTDFAT 609 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L ++ L + +T + V L +R A+++G++ L+ QP + Sbjct: 610 LSKCAEIAMYRAKQEGRN-TLRFFFPEMQERTLRHVQLTGALRGAVERGEMQLHYQPQVD 668 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 E G + +L G ++P +F+PL + L VL + + LA D Sbjct: 669 LQTGELSGVEALLRWTHPLFGAVSPGEFIPLAEESGLIIPIGDWVLRTAARQLADWLRDG 728 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VNL L +A +I + + P +E+TE A + E+++ I++ Sbjct: 729 LPPMVMAVNLSVLQFNLPGLAQQIASILSEAGVPPALFEVELTESMAMTEPEAAIATIDE 788 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 LH G ++++DDFGTGY++ LKR + D +KIDG FV+D ++ D IV +I +A++ Sbjct: 789 LHSVGVQVSLDDFGTGYSSLAYLKRFRLDRLKIDGSFVRDADSDPEDRAIVDAIVGMAES 848 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+ VAE VET Q ++ LG +QGY I RP P A Sbjct: 849 LGLATVAEGVETSGQLEVIRALGGDAVQGYWISRPLPAA 887 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 119/569 (20%), Positives = 211/569 (37%), Gaps = 28/569 (4%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFI 239 + R ++ RR + E++ A + V +L E Sbjct: 106 WEGRRARLAVVEDLTEPRRHMRALEESEQQYRATMGAALVGVYVLQDFRFRYVNPELCRY 165 Query: 240 AGYLVPVF----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 GY + + + Y L + L+ + + Sbjct: 166 FGYSADELVDKLGPLDLVVAEEREYVREQLARRARGEPGHPFELTGLRRDGSHFPFMVFG 225 Query: 296 AV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 A + V + R A DPLT LPN LE Sbjct: 226 APSTWRGQPAS-VGTVFDLSEIKAAEDRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGR 284 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D + ++ G +M +R + L ++ ++ + +L G E +++ Sbjct: 285 DRRAATLMFIDLDRFKTVNDSLGHLMGDQLLRLAGQRLRDSVRLSDTVARLGGDEFIVLA 344 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 EG + + + + ++ L + R+ + + LL Sbjct: 345 PDTGAEGAV-RLAEKILEVFAAPFDLDDRELTISPSIGIARYPDDGKDFPALLQSADIAM 403 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 Q+ ++ + +LL +R ALD G L L QP+ + G Sbjct: 404 YQAKREGRN-GFRMFSIEMNAPILESLLLETQLRRALDHGQLSLVYQPMVDIASGRIVGA 462 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + +L G ++P +F+P+ + L VLE L + +VN Sbjct: 463 EALLRWQHPQHGEISPVRFIPVAEESGLILPIGEWVLEQALGQVQRWRAAGHPDLVMAVN 522 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L L + NI+ ++RL Y + A+ LE+TE +AE ++ + L G R++ Sbjct: 523 LSALQFERLNISNTVLRLLDHYGLPGSALELELTESVLMEDAERAVAAMLNLADRGVRLS 582 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L RL +KID FV++I ++ + R+I DLA++ +L V+AE Sbjct: 583 VDDFGTGYSSLAYLTRLPLAKLKIDRSFVRNIPSDASARSVARTILDLARSLALEVIAEG 642 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VE + Q LL + QGYL RP P Sbjct: 643 VENEAQLLLLREWCCDQAQGYLYSRPVPA 671 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 125/698 (17%), Positives = 232/698 (33%), Gaps = 29/698 (4%) Query: 56 LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG 115 L G V + + F + R WR Sbjct: 154 LAQGGLGVVGRLPVFLNDAQGHKVFWGFTYVTLRFPDALASARLPLLTQRGYAYELWRTA 213 Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 + V ++ ++ L + + +G +D + + + Sbjct: 214 PDTGERQSIEASGNGVLDAPVERTLELPNGQWTLSVAPINGWGQSDRLGFEATINFFLSL 273 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-- 233 ++ Y Y R+ ++ A L +++ +L L L Sbjct: 274 LMAYLAWLLYEMRVRD--QGLEVQVNERTAEILATQRQLQATLGAIPDPLLELGLDGRCY 331 Query: 234 ----YENDFIAGYLVPVFFI-IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 D + + I L + L Q + Sbjct: 332 NAHSSRTDSLPWPTEDLIGRTIMELLPPQACQIVLAALQEAKEKECSIGKQIKVPLDNGM 391 Query: 289 YSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA-- 343 + + + L L + R S+ R+ L A D LT LPN L Sbjct: 392 HWFEMSVTRKSALPGEEPLFLVLCRDITESKQAERKIQLLAHFDSLTGLPNRVLLTDRCN 451 Query: 344 ------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + L +D+ + ++ G + + ++ L ++E + + +L Sbjct: 452 LALSAAQRNGTPLALLLLDLDHFKNVNDSLGHRVGDEVLIALAGRLKGAVREQDTVCRLG 511 Query: 398 GSELLLVLSGPETEGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E +LVL G H+ +L L + F G+ L Sbjct: 512 GDEFILVLPETNAAG-AAHIAEMLLQSALVAFELEPHELTVTPSIGIALFPGDGSDFDTL 570 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 ++ + ++ + + L N +R AL++ L L+ QP + Sbjct: 571 SRCADAAMYRAKKDGRN-NYRFFTAEMQARSERTLTLENALRRALERNQLQLHYQPQISL 629 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK- 570 G + +L + G + P +F+P+ L VL + ++ L Sbjct: 630 ASGRVVGAEALLRWSHPELGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGM 689 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVNL + ++ + + + + LE+TE A ++ ++ + L Sbjct: 690 LPIALSVNLSSVQFRHADLPELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNL 749 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 H+ G R++IDDFGTGY++ LK+ + IKID FV+DI ++ D IV +I +A + Sbjct: 750 HERGVRMSIDDFGTGYSSLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSL 809 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +AE VET+ Q L G +QGY RP P+ Sbjct: 810 GMQTIAEGVETEGQLEFLKAKGCTEVQGYYFSRPLPVE 847 >UniRef50_Q07ZQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=21 Tax=Shewanella RepID=Q07ZQ2_SHEFN Length = 1451 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 106/599 (17%), Positives = 207/599 (34%), Gaps = 25/599 (4%) Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 + + L A ++ RM + ++ Sbjct: 837 AITDHFEIAYRVKARNQQWVWILDRAKIVERDQKDVPLRMTGTIK-DINNIKQAEEQLR- 894 Query: 210 KEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN 264 + + +L + +A F Sbjct: 895 ---LFARAIENISEGMFILNEKYQFVEVNNACCELAASTKEKFANEILHFSRYPASYSEQ 951 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRR 321 + + + +G ++ + + + + + + + R + Sbjct: 952 IRNLLKQQGRWSGEIEASKGKDSYFLMELTIDAIYNEQGETSHYVGVFSDITRRKQQEEE 1011 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 D LT LPN +L+ + + L +DN + ++ G + + Sbjct: 1012 LRKLTNNDLLTGLPNRSSLQVTLSNLVKKDVHHTLMVLDLDNFKRINDSLGHQIGDDLLI 1071 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--RQ-IHWNNTGLD 434 + + + ++ LY+L G E L++ G + + + + NN L Sbjct: 1072 GVAERIKLAIPKHASLYRLGGDEFALLVDQHPDIGSCAAIATQVINCLKPAFTLNNDSLV 1131 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 +G + +++ Q LL + + + E ++ +Q+ + + Sbjct: 1132 LGISIGIVLYPEDEQNEQALLRKADIAMYHAKSGGGNR-YQFYSESLNQNALRQLEIESL 1190 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 IR AL +Y QP + G + ++ G++ P++F+PL + L Sbjct: 1191 IREALKDDLFEVYYQPKIDVKKDRLNGMEALVRLNHPKLGLIGPNEFIPLAEENGLIVEI 1250 Query: 552 DLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL R +VNL ++ RI + + + + + LE Sbjct: 1251 GDVVLRKACFAAQKWLELGLFSGRVAVNLSSRQFALPDLQQRIESILRLTKLPAKHLELE 1310 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE + E ++ ++QL K G +A+DDFGTGY++ LKR + +KID FV DI Sbjct: 1311 ITEGTVIKDPEQAIKVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPINCLKIDKTFVDDI 1370 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D +V SI +A L+VV E VE Q +L L + +QGY+ +P AD Sbjct: 1371 DKSDRDLKMVDSIITIAHNMGLTVVGEGVEQTAQLNILKALNCEEIQGYIYSKPIREAD 1429 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 9/173 (5%), Positives = 34/173 (19%), Gaps = 11/173 (6%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK-----EKRA 214 + L + L L ++I+ Q + ++ Sbjct: 724 LVTPPWWLSLEAKLVYGLFILSLIILSFKVIIRRREIQKQIAQSEERLKLSLWGSGDEMW 783 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + + + D I L ++ + A++ Sbjct: 784 DWDIESGKIYRSNIWGSLDFPQDGRRSGNPDEESNIHPLDRDRVTRALNDHFNAIT--DH 841 Query: 275 LNYNQNFLQGVETEYSLAFIL----AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + + + + ++ + + + Sbjct: 842 FEIAYRVKARNQQWVWILDRAKIVERDQKDVPLRMTGTIKDINNIKQAEEQLR 894 >UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3EBJ4_GEOLS Length = 693 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 93/569 (16%), Positives = 187/569 (32%), Gaps = 44/569 (7%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFI 249 +R E+R L + V+ + + + G Sbjct: 108 HDISRHKRAEQALRLSEERYRMLVEHQSDLVVRVDIEGRLQFASPSFCMLFGIDEEQLVG 167 Query: 250 IFTLGVGKLRYPF---LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL- 305 + + + + + + ++ + Sbjct: 168 RELCPIINSSGQAVMKEAMQRLDCHPKSCYHEICSQTLDG-LRWIGWAMKGVVDEKGHIE 226 Query: 306 --LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 + + R + + A D LT LPN L+ Q + L Sbjct: 227 AIVGIGRDITDRKKAEQEILQLAHYDTLTGLPNRSLLQDRLSQALSLANRGNVTLAVLFL 286 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ +G + ++ + R L ++ + + ++ G E +++L+ + Sbjct: 287 DLDRFKHVNDAFGHQIGDLLLQEVSRRLKDCVRATDTVSRIGGDEFVIILTNLIKCSQAG 346 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S R L G + + + LL Q+ A Sbjct: 347 SIAAKIISSMSRLFQLGGHELYSGTSIGIALYPTDGNDVDTLLKHADMAMYQAKASGRG- 405 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + + +++ L +R A++ +L L QP + G + +L Sbjct: 406 TFKFFSPEHNEKMLQRMQLEQALRRAIEHQELSLDYQPQIDSATGSINGLEALLRWQHPQ 465 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN 588 G++ P F+ + + L VL + + R +VN+ P Q+ Sbjct: 466 LGLLLPGLFITIAEETGLIIPLGEWVLRTACRQARAWQRAGYHRLRIAVNISPRQFQQRG 525 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQA--------FSNAESSMYNIEQLHKFGFRIAID 640 + I + + P+ + + + ++ L + G +AID Sbjct: 526 LIPMIDAILQETGCDPR--------GLELELTETTLMDSPKEATALLKALKRRGISLAID 577 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK D +KID FV D+ + D+ IV +I +A L VVAE VE Sbjct: 578 DFGTGYSSLSHLKHFPIDRLKIDRSFVNDLTRSREDSAIVEAIIAMAHRLGLEVVAEGVE 637 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A+L G + QG+L + + Sbjct: 638 HPDQHAILSDWGCKTCQGFLYSKAVSTEE 666 >UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXA0_LEPCP Length = 771 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 125/738 (16%), Positives = 248/738 (33%), Gaps = 33/738 (4%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L L + + + L W+ V L ++ W Sbjct: 4 LPLAAGTALASTLVIAAFTPGVTADTGLLVWLVSVVTLLLIHGRHWWQWRQRRQAG---R 60 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + L+ L + + + + + + G + + Sbjct: 61 VSTRTLTALIAHAGVFATLWGAVPGWMLAQANAGQHALLA--GSLTGMLCIGGVTLAAVP 118 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 YL G + V V M+ + + + Sbjct: 119 AAAYAYLGGLSLSLIVSQFMQPSAQLGAGAVQWAGCAAVMVGGVLMMSRTVRARVQAEMQ 178 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAAL-------SVLLLLLCTPYENDFIAGYLVPVFF 248 A+ + ++ L W S L + L+ V Sbjct: 179 AEHQGQLIGLLLRDFGEQGSDLLWQIDERGCLSQVSRRLADALGRPLAELQGRPLLEVLT 238 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 + R L + ++ + L++ Sbjct: 239 ELQQGLSDIDRDATQMLQTCLIEGQPFRDVLMPMRVKGQPRWWSLTAKPLVNERGVAMGW 298 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL----EQAPEQEAG----KSFCCLRI 357 + R ++ +RR A D LT L N E A +Q + CL + Sbjct: 299 RGVARDVTQARMADRRMAWLAHFDTLTGLTNRAHFRVLLEAALQQARSPEQGGAVMCLDL 358 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + R L + + + +L G E ++L ++ Sbjct: 359 DHFKTVNDTLGHPTGDALLVEVARRLKAAVGPGDVVGRLGGDEFAVLLRNAADVQQISAT 418 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + RF + ++ L+ + A ++ Sbjct: 419 AQRILDALREPCAALGAQVPVRLSIGIARFAQDGASVDELMQHADLALYDAKASAPG-SM 477 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + Q ++++L +R A+D+ L L+ QP + + G++ +L + G Sbjct: 478 KFFAPRMGEQVRRRLVLERDLREAIDKQQLSLHYQPKVDLQTWEVTGFEALLRWRHPEHG 537 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 + P +F+P+ L VL + A P + ++N+ P+ ++ +N+ Sbjct: 538 NIPPSEFIPVAEDSGLILPIGEWVLTQACQQAARWPA---PMQVAINISPVQVMAQNLPE 594 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + R K ++P+ + LEITE + ++ + L K G +IA+DDFGTGY++ Sbjct: 595 AVGRALKASGLAPRRLELEITESVFINETRGTVDRLHALRKVGVQIALDDFGTGYSSLAY 654 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+R D +KID FV++++ + IVR+I LAK+ +S VAE VE Q ++L Sbjct: 655 LRRFPFDTLKIDRAFVREVLLSRDARAIVRNILALAKSLRMSTVAEGVEEPAQASVLGNE 714 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QG+L+ RP P + Sbjct: 715 GCDLVQGFLVSRPMPADE 732 >UniRef50_Q2SPM3 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPM3_HAHCH Length = 826 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 117/646 (18%), Positives = 226/646 (34%), Gaps = 44/646 (6%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + +G+V + + +++ + IS ++ L Sbjct: 171 VLIIGIVRNMVLVLLLFIAFYYMITRPLISLAASFSEVNPEDPGDRRLRLPRSHDGDELG 230 Query: 185 YLTRM----IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 YL ++ + + R+ E++ + + F+ Sbjct: 231 YLAQIGNQFLETLQKRLEERRQAEETLRDSERQTRQIIDTVPHLIYAKDR--NGAFVFVN 288 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 L + T G + +L + ++ N ++ + + + L + Sbjct: 289 QALASFYDRNITEIEGGDHHSLHHLISNLESVRFDNEDREVIDKQKVMFIPEHGLTDIYG 348 Query: 301 FSV---------------CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 C L + R A DPLT LPN Sbjct: 349 RRRILQSNKIPFRFFGKPCALIVSVDITDRVEAQSRVEQLAFHDPLTGLPNRNLFYDRLT 408 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 A + + +DN + ++ G + +R++ + L + E + +L Sbjct: 409 MDIARSRNHGAYGALLLIDLDNFKNINDSLGHSVGDELLRNVAKNLRNCLDEEITVGRLG 468 Query: 398 GSELLLVLSGP-ETEGRLQH----MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 G E +++ T + + + S +N + + Sbjct: 469 GDEFTVIMPELGRTPEEAEQNANLIAAKVLSELSTPFFFNTQEFTVTASMGVALYPDKDA 528 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + +L Q+ + + ++ +K++ + N +RTA+ L+ Y Q Sbjct: 529 NTEVILRYADTALFQAKHEGRNK-VTIFKAEMADAVSKRLSIENELRTAVKDKALMFYYQ 587 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + ++ G++TPD+F+P++ NL L + + Sbjct: 588 PQVSVTDGRIIGAEALIRWNHPQRGLITPDEFVPVLENSNLILTAGLDMFTQACMQVKEW 647 Query: 567 PCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + R +VN+ P Q +II + + + + LE+TE N + + Sbjct: 648 LDKGWWEEDMRVAVNVSPKQFYQPEFVEQIIEILEATRLPAYCIELEVTESVVIQNVKDT 707 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L G R ++DDFGTGY++ LKRL D +KID FV DI ++ DA IV +I Sbjct: 708 INKMLSLKGLGVRFSLDDFGTGYSSLSYLKRLPVDSLKIDRSFVTDINSDVNDAAIVSTI 767 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VVAE VET + L + Y QGYL +P P + Sbjct: 768 LAMAAHLDLEVVAEGVETVEHLEFLKENECDYYQGYLFSKPLPAEE 813 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 124/693 (17%), Positives = 227/693 (32%), Gaps = 48/693 (6%) Query: 68 LCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ---- 123 + + + G+ A L QL R Q Sbjct: 415 RMAAAVRQQVRAKEQQVASLALKGALFDFSSAAIFSLDRQLKVIEWNAAAERLFGQERDG 474 Query: 124 ---RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 R + P G ++GS + G DA T Sbjct: 475 VLGRAAGEVVTAPNGPADWAAILGSTATGTFQFLGAHGPFDAEL------RFVTFTQEER 528 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + ++ I + R++ + + + +V L + I Sbjct: 529 EIHTFVLNDISERKHTERQLRQERDYADAVLNSLPGVFYHYDENVRLRRW--NRNLERIT 586 Query: 241 GYLVPVFFIIFT--LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 GY + + + + V + ++L F Sbjct: 587 GYKSEELAGVEPTIFFADEDKALVASRIGEVFEKGESSVEADYLLKDGQRIPYLFTGVRF 646 Query: 299 I-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRI 357 + + + +R A+ D LT LPN +++ EQ ++ Sbjct: 647 EYDGRRGFVGVGYDISERKRAEQRIRHLAMHDGLTDLPNRNLIQERIEQAIVRA------ 700 Query: 358 DN---------------LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + ++ YG + +++ LL L++E + + +L G E L Sbjct: 701 -RRGGRLLALLYLDLDRFKVLNDGYGHLFGDAVLKTASERLLKLVREGDTVARLGGDEFL 759 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L+ E + + I + + F + ET L+ Sbjct: 760 ILLADLEQPADADAVARKIVGSLDCPIVVQERKIHLSGSIGVSLFPRDGETADELIDNAD 819 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---G 516 ++ +S +T ++V L +R A G L L QP + E Sbjct: 820 MAMYRAKELGRN-TYQFFTRAMSLETQRRVDLEIKLRGAATAGQLQLVYQPKVSLENGGI 878 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRF 575 G + +L + GI++P+ F+P+ L VL + Sbjct: 879 SGCEALLRWHHPELGIVSPEHFIPIAEDSGLIVPIGDWVLRTACMQARAWMDAGLPPVCV 938 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ LQ+++ + R + + + LE+TE + E I+QL G Sbjct: 939 AVNVSTRQFLQQDVVAWVTRTLRETGLPAARLELELTESLIARDIEKVTATIDQLKDIGV 998 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +++IDDFGTGY++ LKR + D +KID FV++++T D IV ++ LA V+ Sbjct: 999 KLSIDDFGTGYSSLNYLKRFRVDTLKIDQSFVRNMLTEMEDETIVLAVIALAHNLKFKVI 1058 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET+Q L G +QG+ P Sbjct: 1059 AEGVETEQHSRFLCSNGCDEIQGHYFSEPVTAE 1091 Score = 55.0 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/264 (8%), Positives = 58/264 (21%), Gaps = 7/264 (2%) Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL 125 F + + + +G++ + + L T R+ ++ Sbjct: 289 LASLSGFSGDAFVDRMELEGEQRWVGARRLDLKGGISWLVVASRTAPFIEAPLRHQLFQV 348 Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY 185 +GL +G+ F PL + + + + Sbjct: 349 LGMGLAIALGLVLVSVRTARRFGRPLAELERRVTGIGLHDLNASATSPLSSADDFRETQL 408 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIA 240 L + + A R + L ++ ++ L + + Sbjct: 409 LGKALDRMAAAVRQQVRAKEQQVASLALKGALFDFSSAAIFSLDRQLKVIEWNAAAERLF 468 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 G + P WA FL + + Sbjct: 469 GQERDGVLGR--AAGEVVTAPNGPADWAAILGSTATGTFQFLGAHGPFDAELRFVTFTQE 526 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHL 324 +++ + R+ Sbjct: 527 EREIHTFVLNDISERKHTERQLRQ 550 >UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Trichodesmium erythraeum IMS101 RepID=Q118H0_TRIEI Length = 866 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 107/615 (17%), Positives = 204/615 (33%), Gaps = 69/615 (11%) Query: 183 FYYLTRMIVSPHFAQI-LWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYEND 237 + R I AQ ++ A E+R L + ++ + ++ Sbjct: 241 SIGVNRDITQQKRAQEFALQQAEAALKESEERYHRLVKNSPEAIAVNYMEKIVYINAAGA 300 Query: 238 FIAG---YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYSLA 292 + G + ++ +L V + + + ++ + Sbjct: 301 KLFGANCPDEIIGQLLRKFIPSELIETEKQRLQQVQEQGMETHLQEEKLIKLNGEIIDVE 360 Query: 293 FILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 + +++ + + AL D LT LPN + Sbjct: 361 ILGIPYTYDGKAATQIILKDITHRKKTQAKLVYDALHDTLTGLPNRALFFERLKLALCRS 420 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + L +D + ++ G + + +I + L ++ ++ L +L G E Sbjct: 421 RKQPNYQFNVLFLDLDRFKVINDSLGHTIGDRLLIAISKRLQNCIKASDTLARLGGDEFT 480 Query: 403 LVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGR----FDGN-------- 447 ++L P + ++ I+ + F + Sbjct: 481 ILLESPSNLQDATKVAGRIHQELVRPIYLEGNEIFTTASIGIVTNRRNFIEDIDENHPLI 540 Query: 448 ---QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD---- 500 + LL ++ + + + + + L N +R A++ Sbjct: 541 CPIYNKPEDLLRDADIAMYRAKTLGKAR-HEVFDLTMHREAISLLQLENDLRRAIEIIKQ 599 Query: 501 ---QGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 +L QPI G++ +L G++ P +F+PL + L + Sbjct: 600 NPVNSQFILNYQPIICLNTGIITGFESLLRWAHPTRGLIYPGQFIPLAEETGLIVPLGMW 659 Query: 555 VLESLLKWLATHPCDKK------------------GPRFSVNLMPLTLLQKNIAGRIIRL 596 +L S+ L T + SVNL L Q N+ I + Sbjct: 660 ILRSVCHQLTTWQQECSTKYDSGCCMYSSCQFPTDNFTVSVNLSSKHLSQPNLLEEINTI 719 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + P + LEITE N + + +L ++ IDDFGTGY++ L + Sbjct: 720 LEETNCQPSYLELEITETLIMENVSLATQILNKLKNKNIKLLIDDFGTGYSSLSYLHQFP 779 Query: 657 ADIIKIDGVFVKDIVTNTLDAM--IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D IKID FV + ++T IV +I LA L ++AE +ET+ Q L KL Sbjct: 780 IDSIKIDRSFVSRLDSDTSGQTCKIVGAIIGLANNLGLEIIAEGIETRTQMQKLKKLQCN 839 Query: 715 YLQGYLIGRPQPLAD 729 QGYL +P D Sbjct: 840 KGQGYLFSKPLEGED 854 Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 10/133 (7%), Positives = 28/133 (21%), Gaps = 11/133 (8%) Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFF---IIFTLGVG 256 ++ + V+L + GY Sbjct: 130 TLIQRSLQKKALIFEYLYDGVILTDTQGNIVDWNSAATRMFGYSKTEVLGKSPAILHKPE 189 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYH 313 + + NF++ +E + ++ ++ + R Sbjct: 190 IASVLTKEIIERIKVNDKWIGEINFIRKDGSEGICETTVVPILDQQNQMVGSIGVNRDIT 249 Query: 314 RSEWLNRRWHLQA 326 + + QA Sbjct: 250 QQKRAQEFALQQA 262 >UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensors n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE1_9CYAN Length = 1090 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 99/572 (17%), Positives = 203/572 (35%), Gaps = 36/572 (6%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL---------LLLCTPYENDFIAGYL 243 T+ ++V + + + G Sbjct: 501 VQNDITERYEAQEEVRQTRNFLQTMIDHLPVAVFVKEAYQEKLGRFRLWNKACEQLFGLS 560 Query: 244 VPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNY-NQNFLQGVETEYSLAFILAVLI 299 + + +S +L+ + + L + L+ Sbjct: 561 AVEVLGKTVYDVFPPEQAEFFHQQDQAVLSAGKVLDIPEERVETQTLGQRILHTVKVPLL 620 Query: 300 SF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------E 347 + + LL + + + + A D LT LPN Sbjct: 621 NHYPDTEYLLCIGEDITKRKQAEDQLRHHAFYDTLTNLPNRALFLNRLAHSIKQVQQTSG 680 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +DN + ++ G + + +I R L ++ + L +L G E ++L Sbjct: 681 ELFAVLFLDLDNFKRVNDSLGHQIGDQLLIAIARRLEGCLRSRDTLARLGGDEFTILLEQ 740 Query: 408 PETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGR-FDGNQETLQPLLGQLSWLAE 463 + L+ + + + + +++ + LL Sbjct: 741 INNITDAIKVARHLHQQLMLPFNLSGNEVFTNVSIGIALSCSRHEQHPEELLQNADSAMY 800 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 ++ A + + Q +++ L + +R AL+ + +Y QPI + E G++ Sbjct: 801 RAKEMGKG-AYAVFDTRMHRQAVERLQLESQLRRALELNEFQVYYQPIVSITTGEVIGFE 859 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSV 577 ++ L G ++P F+P+ + L ++ VL + L SV Sbjct: 860 ALIRWLNPYKGFISPALFIPVAEEIGLISKIGQWVLYQACEQLQVWRKQFPLFKNLTVSV 919 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL L + ++ +I ++ + + LEITE N + ++ + Q+ ++ Sbjct: 920 NLSSQQLREPDLLEQIDQVLATTGLPSHCLKLEITESLLIENYDQALKILRQIQDRNIQL 979 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ L R + +KID FVK + N + I+++I LA A +++ +AE Sbjct: 980 SLDDFGTGYSSLSYLHRFPINTLKIDRSFVKRLKQNHENTAIIKAILRLANALAMNTIAE 1039 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +ET Q L LG +Y QG+L + D Sbjct: 1040 GIETVFQLEKLKGLGCEYGQGHLFSKALDAQD 1071 Score = 72.3 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 11/165 (6%), Positives = 29/165 (17%), Gaps = 26/165 (15%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL--------LLCTPYENDFIAGYLVPVFFI---IF 251 S ++ +++ ++ + I GY F Sbjct: 382 ARQQSTESLYLMERAINASSNGIIITDATETDHPIIYVNAGFERITGYSKEEVIEQNCRF 441 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYM 308 G L A+ + + +A + + + Sbjct: 442 LQGPQTDSSLVERLRTALLQGRECRVVIQNYRKDGRLFWNDLQIAPVFNDRGHLTHFIGV 501 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFC 353 T L+ + + Sbjct: 502 QNDITERYEAQEEVRQ-------T----RNFLQTMIDH-LPVAVF 534 Score = 59.2 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 24/211 (11%), Positives = 41/211 (19%), Gaps = 14/211 (6%) Query: 126 FWLGLVTPIGIKCSMYLVGSFFDF--PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 WL +V GI + ++ P+ + F + LL I + Sbjct: 25 AWLTMVVGSGILGTTLILRQSVFIQDPITQTVQLSLTGLTFALGILLGAIATRFISQLQV 84 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 Q L + GY Sbjct: 85 NAELETHSQIDPPQCQPFIQERDRFFSLS-LDLLCIASFEG---YFQRVNAAFVNTLGYT 140 Query: 244 VPVFFIIFTLGVGKLRYPFL---NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + L N+ + L++ A + Sbjct: 141 EAELLSVPLWEFVHPDDQAATKAELAEIAQGKPSFNFENRYRCRDGDYRWLSWTSAPFVQ 200 Query: 301 FSVCLLYMVRIYHRSE----WLNRRWHLQAL 327 L + R + L R QA Sbjct: 201 E-GLLYAVARDVTEYKHSVAQLQSRIEQQAT 230 >UniRef50_Q2VYM7 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2VYM7_MAGSA Length = 982 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 111/629 (17%), Positives = 211/629 (33%), Gaps = 37/629 (5%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 I + + P F V + + + R + Sbjct: 341 LIAGLTDIARGLYVDPADRERFREILARDSVVRNFEARVRTRSGEIIWIAENARAVYDGR 400 Query: 195 FAQILWR------RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYL 243 + + + + A T+ ++++ +L + + G+ Sbjct: 401 DRLVCYEGTVQNITARKQAEESLRLAATVFETVGEAIVVTDRERRILAVNAAFERMTGWN 460 Query: 244 VPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI- 299 + + + + + A L + Sbjct: 461 AAEMVGQTCDLLAVEMIGLREIEEMWRLAANTGQWSGETWTRRKESEPFPAALALTAVDQ 520 Query: 300 -----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 + ++R R +R A D LT LPN + +A + Sbjct: 521 GADAKGEDGRFVLLLRDITRKRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRAEQT 580 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + L ++ + ++ YG + +R + R L ++ ++ + +L G E +++L Sbjct: 581 GERLAVLYLDVNRFKDINDSYGHAVGDELLRQVARRLKACVRASDVIGRLGGDEFVMLLP 640 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 Q N + + L G + + + + LL + Sbjct: 641 SVGDHTAAQACANKVLYAFAEPFDMEGLQLFAGTSIGIALYPDDADGAESLLSRADAAMY 700 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + L + + Q ++V L N +R AL + L QP + G + Sbjct: 701 HAKRGG--LPYSCFDIEMDRQVAERVSLENDLRLALGEDQFRLVYQPKVDALSGAIIGAE 758 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNL 579 ++ ++P F+P+ + L D VL + +A SVNL Sbjct: 759 ALIRWRHPVRADVSPGLFIPVAERAGLIGAIDDWVLVEACRQVAEWRAQGLILPSISVNL 818 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P + ++ + P + LEITE S+ + ++ + QL G R+++ Sbjct: 819 SPAQFHDGRLKEKVKAALAGSGLPPSVLELEITETMMASDVDRAIEILGQLTTLGVRVSL 878 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK +KID FV ++ N D I+ S+ LA SV+AE V Sbjct: 879 DDFGTGYSSLAYLKLFPVSTLKIDRAFVTELPGNAKDGAIIASVIALAGNLGFSVIAEGV 938 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET++Q A L G +QG+L RP A Sbjct: 939 ETREQAAFLAARGCPIMQGFLFSRPVNAA 967 >UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGP3_OLICO Length = 825 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 133/751 (17%), Positives = 260/751 (34%), Gaps = 41/751 (5%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW 61 + L+ +++ F + + + S + + M + + I+G Sbjct: 51 LAAGLVCGCGVWSTHFIGMLAYSPGVPITFDFTMTMVSFAVAVVMMTAGFVAA---IYGE 107 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR-YGLTSRY 120 R ++ G + + L + S V + +L G + L + Sbjct: 108 RTWSSLV-GGVIVGIAISVMHHLGIVALRMSADIVWMPDLLVLSAVCGIVFSTLSLFTVR 166 Query: 121 VWQRLFWLGLVTPIGIKCS---MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + G+ + + + S I+T +A V+ + V Sbjct: 167 QGTAITHSGIAAALLATATLSDHIIAVSAIGLIPDINTVSDEAGLSPIVLSISVASMMVA 226 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-----FTLSWLAALSVLLLLLCT 232 I S + A + L + + Sbjct: 227 IVIACLIGAISDRRSRRHMNERNIQLNAAIQNIMQGLCMFGPDNCLQLWNDK-YVSMYRI 285 Query: 233 PYENDFIAGYLVPVFFII--FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 E+ + + +F V +L + L +V + + S Sbjct: 286 APEDIRVGATVEELFAARKKAGTIVKELDFYSTRLWDSVKNRESARWVLELV--DGRTIS 343 Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----- 345 +A+ + + R A D LT L N A Sbjct: 344 VAYQAM----ENGGWVGTHEDITEQRKSEARIQYLAQHDSLTGLFNRVAFNDHVRKVWQK 399 Query: 346 ---QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 Q+ + L ID ++ YG +R R L + + +L G E + Sbjct: 400 AAAQKHPFTILSLDIDRFSEINDTYGHSTGDAFLREAARRLQAACG-SAFIARLGGDEFM 458 Query: 403 LVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 +V S E R + + + + + G + + E ++ L+ Sbjct: 459 IVSSEGEQPARAGDICTRVLTAFEMMFNIDGHAIHSGCTVGVSIYPQDGEDIETLISNAG 518 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGE 517 ++ ++ E + Q ++ ++L+ + L+ L L+ QP + Sbjct: 519 VALYRAKKEERG-SIRFFEPEMDRQLREKRVMLHDLDLVLENKQLELHFQPQADPDGTPF 577 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 G++ ++ + G++ P F+PL + D +L + A+ P ++ Sbjct: 578 GFEALVRWRHPEKGLVPPGVFVPLAEETGAIVAIDEWILRKACQEAASWPK---PLSIAI 634 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ P++ ++ G I + ++P+ + +EITE + + + ++ G R+ Sbjct: 635 NVSPMSFQHNDLPGLIHSILLETGLNPKRLEIEITEGVLVQDFSRACSILRRIKNLGVRV 694 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 A+DDFGTGY++ L+ D IKID FV I N + I+R+I L +A +L V+AE Sbjct: 695 AMDDFGTGYSSLSYLQSFPFDKIKIDQAFVAQINKNVQSSAIIRAIISLGEALNLGVIAE 754 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET+ Q+ L G +QGYLIGRPQP+A Sbjct: 755 GVETELQRDFLADAGCFEMQGYLIGRPQPIA 785 >UniRef50_A1U2T3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Marinobacter RepID=A1U2T3_MARAV Length = 725 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 106/577 (18%), Positives = 191/577 (33%), Gaps = 42/577 (7%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF 248 + E + + V + + + + + GY Sbjct: 134 QSLIRAHEMVQSRLEKSEALHRYIVNSSPDIVFMLDETGHICFINNKVESLLGYQPSELC 193 Query: 249 IIF----TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET--EYSLAFILAVLI--- 299 R + +S + Sbjct: 194 GQHFRHILDDRDVARGTYALQGPNISADNPRVLEVRLKTRGSRKATRHFEITAFPVDPQT 253 Query: 300 ------------SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 + R + + QA D LT LPN + Sbjct: 254 WPQTGKTQGGCTGQPARYYGIARDVTERKEAEAFINFQAYHDLLTRLPNRALFKDRLELA 313 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + L +D + ++ G M ++++ L ++ + L + G Sbjct: 314 ITHARRSQQKLAVMFLDLDRFKVVNDTLGHAMGDRLLQAVTHRLEKCLRRGDTLSRFGGD 373 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L+L +++ L + + +G F ET+ L+ Sbjct: 374 EFTLLLPSIHGHDDARNIARKLIHALKAPFQLGDHEVFVGVSIGISVFPEAGETMDLLIQ 433 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---N 513 A + +S T ++ L +R AL++ +L ++ QP + Sbjct: 434 NADIAMYHVKARGKD-GYRFYSDSMSINTANRLSLERDLRLALERNELRVFYQPQVCSRS 492 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 G + ++ + G++ P FLPL + L + QV++ + + Sbjct: 493 NRVVGLEALVRWQHPERGLLYPGDFLPLAEETRLVGKLSEQVIDQACRDVGRWISSGHSD 552 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VNL P + ++ ++ + +EITE ++ E +++L Sbjct: 553 LRLAVNLSPSQVEHPRFVETLMNRVAAHNFPADNLEIEITENVIMNDLEQISRKLKELAA 612 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G RIAIDDFGTGY++ L RL +K+D FVK I + A IV +I +A L Sbjct: 613 TGVRIAIDDFGTGYSSLNYLHRLPIHTLKVDQSFVKAIRSGEDGACIVNAIIAMAHGLKL 672 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +VAE VET Q A L LG +QG+ G +P AD Sbjct: 673 EIVAEGVETDDQLAYLKSLGCHQVQGFFYGPARPAAD 709 >UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V122_9PROT Length = 995 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 108/722 (14%), Positives = 223/722 (30%), Gaps = 78/722 (10%) Query: 57 FIFGWRGVVPVLCGMFCTNLW----NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRW 112 + WR + + GM + + + V+ A + Sbjct: 291 VLAAWRYLPELRWGMVVKIDADEVFAPLYQQRRNLLGILFVLTVLGGLVAFFLGRQLVIR 350 Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 +S L + + F+ + F + L Sbjct: 351 IKRFSSTADEIARGDLSRRVEESGSDEIGTLAQNFNRMTENLQFSYRSLEGRVDERTREL 410 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 + + + AQ R E T + ++ Sbjct: 411 QVSNEQLQEEIIEREHIEKALRDAQEYLRIAATTFETHEAILITDARAN-------IIRV 463 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 GY F + ++ + + + Y Sbjct: 464 NQAFQDTTGYCAEEVLGKNPRFLSSGCQDSAFYVEMWQQLVANGTWSGELWDRHKDGHIY 523 Query: 290 SLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + + + + + + A D LT Q P Sbjct: 524 PKNLTITAVKNILGETTEYVSIFSDISERKRAEEEIRNLAFYDVLT---------QLPNR 574 Query: 345 ---------------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 + + L +D + ++ G + + + ++E Sbjct: 575 RLLLDRLHLALSVSARSGSYGAVLFLDMDRFKRLNDTLGHGCGDLLLIEVAERIRFCVRE 634 Query: 390 NEKLYQLPGSELLLVLSGPETEGR-----LQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 + + + G E +++L + + S Sbjct: 635 VDTVARFGGDEFVILLEEVGKNADEASKKAALIAEKIRAALSVPYKIKEHEYHSSPSIGV 694 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL-- 499 + GN ++ LL ++ A+ + ++ +++ L + A+ Sbjct: 695 NLYCGNGNAVEDLLKHADMAMYEAKESGRN-AVRFFDPVMQHSVSERASLEADLHRAVPD 753 Query: 500 -----------DQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 D G + +L + G+++P +F+PL + L Sbjct: 754 QQLQLYYQIQVDSNQ-----------RSLGAEALLRWIHPTRGMVSPAQFIPLAEESILI 802 Query: 549 ARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VL++ + LA +VN+ Q++ ++ R+ + + + Sbjct: 803 LELGDWVLDAACRQLAIWSEADLMRHLTLAVNVSGKQFKQRDFVEKVARILQVHQVDASR 862 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LE+TE ++ + ++ L R+++DDFGTGY++ LK+L D IKID F Sbjct: 863 LKLELTESVVLNDVTDVISKMQALKALRVRLSMDDFGTGYSSLSYLKQLPLDQIKIDQSF 922 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V+D+ + DA++V++I D+AK L+V+AE VET+ Q+ LL +LG QGYL +P P Sbjct: 923 VRDMTFDQNDAVMVQTIIDMAKNFGLNVIAEGVETEAQKLLLEQLGCLNYQGYLFSKPLP 982 Query: 727 LA 728 +A Sbjct: 983 IA 984 >UniRef50_Q3JAB6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JAB6_NITOC Length = 700 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 111/566 (19%), Positives = 210/566 (37%), Gaps = 28/566 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 V + RR + R ++ V ++ L AG F Sbjct: 126 AVERELREANIRRQRQAVENERARLSSILEATPDLVAIMDLEGRIHYMNQAGRQWLGFIK 185 Query: 250 IFTLGVGKLRYPF---------LNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAV 297 L + A + L E ++ Sbjct: 186 KNHYAGASLLAHYPLWTASLIRDTAIPAALREGVWEGEAVILNPSGGEIPVSQVILSHRN 245 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 ++ L + R + + + D LT LPN L + Sbjct: 246 ALNQVEFLSTIARDISERKHYEQELQYRVTHDTLTHLPNRILLRDRLIQVLAHAKRNQRL 305 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +DN + ++ G + C+R++ L ++E++ L + G E L++LS Sbjct: 306 TAVLFLDVDNFKQINDGLGHLTGDKCLRTLAHHLAGCIRESDTLGRYGGDEFLIILSDLR 365 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + ++ ++ + S+ + NN + + + + + + LL + Sbjct: 366 SYSDVETLIKKIRATVSQPLKLNNNDVFITLSIGVSLYPQDGDDEEALLKTADAAMHTAK 425 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 ++ + ++ + L + AL++ + +LY QP + + + ++ Sbjct: 426 HSSPGQC-RYYRPEMNVRGSELLALETDLHRALEREEFVLYYQPQLDVTTGQITAVEALI 484 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 + G+++P F+PL+ Q L L + + R +VN Sbjct: 485 RWQHPNRGLVSPRDFIPLLEQTGLIEEVGKWGLNTACRQAKAWHSQGYPIRMAVNCSARQ 544 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q + + ++ ++ + P + LE+TE + +S+ Y +++L + G +AIDDFG Sbjct: 545 FQQ-HFLDIVHQILQKQSLDPAYLELEVTESVVMQDTQSATYILQRLKEMGVTLAIDDFG 603 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR +KID FV+D+ N DA I +I L + L VVAE VET+ Sbjct: 604 TGYSSLAYLKRFPIHSLKIDCSFVRDVTKNEEDAAIAETILLLGNSLGLEVVAEGVETEA 663 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q +QGY IGRP P D Sbjct: 664 QMRFFQDRHCHRIQGYWIGRPMPAKD 689 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 95/574 (16%), Positives = 187/574 (32%), Gaps = 36/574 (6%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP------ 233 M R I + + +L +++ L Sbjct: 369 VMGTVGFFRDITDIKQNEEKLIQRERELQ-------SLIDNTPDTIIRYDLNARRLYVNT 421 Query: 234 YENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + I + G + +++ + + + Sbjct: 422 PKLKRIGIESGRLIGTTPSEYPGGEAYMKYEEKIRGVINSATPDFLELHGKADNGNTWFI 481 Query: 292 AFILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--- 345 + ++ ++ R R H A D LT LPN Sbjct: 482 HVRIVPEFGEQGQVIGVLAVERDITELMEYRERIHYLAYYDALTGLPNRTLFADRVNQVL 541 Query: 346 -----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 E L +D + ++ G + ++ + L ++ + + +L G E Sbjct: 542 ADASWHEQRFGLMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYDTIARLSGDE 601 Query: 401 LLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++L L + + ++ ++ L + + + + L Sbjct: 602 FAILLPELRNPDDLATIARKINDEIAKPFLIHDKELFISTSIGIAIYPDDGDDRATLFKS 661 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 + + + + ++ ++L +IR AL + L+ QP + Sbjct: 662 ADVAMYHAKNYGRN-NYQFYSRELGSKASEYIMLGASIRQALKNAEFELFYQPQVDLMSG 720 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW---LATHPCDKK 571 E G + +L G++ PD+F+ + + L VL L + D Sbjct: 721 EIVGAEALLRWRNPQLGVVMPDRFIKVAEESGLIVEIGEWVLREACSAVVCLNRYRPDDH 780 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL L ++ + + P+ + LEITE +++ + + Sbjct: 781 PLSMAVNLSSRQFLYNDLLASVKDILAETGCKPEWLKLEITESLLLEDSQEIISTLSTFK 840 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G I+IDDF TGY+ L + +KID FV+DI ++ +I +A A Sbjct: 841 EMGITISIDDFCTGYSAMSYLGQFPISQVKIDRSFVRDIAAKQDKLELITAIIRIAHALR 900 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 L +VAE VE++QQ LL G QGY G+P Sbjct: 901 LELVAEGVESKQQANLLKIQGCTIAQGYFFGKPM 934 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 11/144 (7%), Positives = 29/144 (20%), Gaps = 11/144 (7%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAG-YL 243 +++ RR +E+ L V L L AG Sbjct: 246 VLTITRDISHIRRVERELRKRERYQSALIENFPFVVWLKDLNSKLLAANSAYAEFAGVAS 305 Query: 244 VPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV--L 298 + R + + + + + + + + Sbjct: 306 KDELEGKTDFDLFPLQDARTHVEGDKRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPMVV 365 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRW 322 + + R + + Sbjct: 366 DGKVMGTVGFFRDITDIKQNEEKL 389 Score = 44.2 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 6/152 (3%), Positives = 25/152 (16%), Gaps = 20/152 (13%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN-------------DFI 239 + +E + L + + Sbjct: 122 LGRDLTARFDMLDKLQEQELQYRQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAEA 181 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC---LLNYNQNFLQGVETEYSLAFILA 296 G + + + + +++++ Sbjct: 182 LGRKPTEVWGRPMMRPEDFEARLREVMRSGEEQEIELEWVGDEHYVCQSLHAVPE----R 237 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + +L + R + R + Sbjct: 238 NVKGEIKGVLTITRDISHIRRVERELRKRERY 269 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 115/611 (18%), Positives = 221/611 (36%), Gaps = 73/611 (11%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCT 232 I + + V F +R + E+ TL + +V + Sbjct: 106 IMDRHGDDRGQRFVGVTFNIDERKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYV 165 Query: 233 PYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 G + + +T + + E Sbjct: 166 NPALASSFPGGAEKILGKKPSEIPGGPEFDKFEAKIVEVFATGNNALFELKWQGKDGKEL 225 Query: 290 SLAFILAVLISFSVC---LLYMVRIYHRS-------EWLNRRWHL-------QALTDPLT 332 L S +L + R + N + QA +DPLT Sbjct: 226 CNHIRLTAERDSSGRLTSVLAIGRDITELYESRAALKRANAQLENMNDLLQSQATSDPLT 285 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN R + + + +DN + ++ G + ++ + L Sbjct: 286 GLPNRRFMLDRLKHALASSSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAHRLE 345 Query: 385 PLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMG 436 ++E + + +L G E +++L E + + + + + + Sbjct: 346 TCVREGDTVARLGGDEFVVMLEDLSEKDLEAAAQTEAVGEKILAALNQPYQLGKHEYRNT 405 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 F+ +Q++L LL Q Q+ AL + + + L N +R Sbjct: 406 PSIGATLFNDHQQSLDELLKQADIAMYQAKRAGRN-ALRFFDPQMQETINSRATLENELR 464 Query: 497 TALDQGDLLLYAQPIRN-------KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 AL+ L+ Q + G + ++ + G+++P +F+PL + L Sbjct: 465 KALELHQFYLFYQVQVDSVQEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAEETGLIV 524 Query: 550 RFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 L VL++ L T D G +VN+ Q + ++ +R+ I P+ Sbjct: 525 PIGLWVLDTACAQLKTWQHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGIDPKL- 583 Query: 608 ILEITEEQAFS-----------NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 N + ++ + L + G R ++DDFGTGY++ + LK+L Sbjct: 584 ----------LKLELTESLLLENIQDTIATMNALREIGIRFSLDDFGTGYSSLQYLKQLP 633 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F+ D+V+++ D IVR+I +A++ +L+V+AE VET+ Q+ +L + G + Sbjct: 634 LDQLKIDQSFICDLVSDSSDRAIVRTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHH 693 Query: 717 QGYLIGRPQPL 727 QGYL +P P+ Sbjct: 694 QGYLFSKPVPI 704 >UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=Q478L4_DECAR Length = 1665 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 99/590 (16%), Positives = 203/590 (34%), Gaps = 39/590 (6%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 ++ + +++ I A+ + ++ A + Sbjct: 941 IMVETRVVNGYWDGQPALIGISQDISERLMAEERQQLAA-----------SVFDNAHEGI 989 Query: 226 LLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 ++ +L + GY + + + Sbjct: 990 MITDPKGNILEVNATFTELTGYSRAEALGNTPDMLKSGHHDPAFYEEMWQKIRDDGYWRG 1049 Query: 278 NQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + + ++ + + + + + +R A D LT L Sbjct: 1050 EIWNRKKSGEIFVEQLTISSVRNRDGALSNFVAIFSDITLLKQHQQRLEHLAHFDALTQL 1109 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN L + C L +DN + ++ YG + + + + L Sbjct: 1110 PNRMLLSDRMQLAKAQAERSGKTLAVCYLDLDNFKPINDRYGHSVGDFLLIEVAQRLKTC 1169 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGR 443 ++ + + +L G E +L+++ + H + + S+ + + + Sbjct: 1170 VRAGDTVARLGGDEFVLLITNLDDLNECDHAMTRVISALSQPFRVSAQFVTVSASIGVTL 1229 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + LL + + + + + IR L G+ Sbjct: 1230 YPHDGSDSDTLLRHADQSMYAAKQEGRNR-YHLFDPENDRRARLRREEIGQIREGLANGE 1288 Query: 504 LLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LY QP N G + ++ + G++ PD FLP + L+ V++ L Sbjct: 1289 FKLYYQPKVNMREGSFIGAEALIRWQHPERGLLLPDSFLPALEGSELAIDIGDWVIQEAL 1348 Query: 561 KWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFS 618 K + S+N+ + L + R+ L Y +++P + LE+ E A Sbjct: 1349 KQIDAWHRTQGIDLSVSINIAGIHLQHPGFSRRLGELLAAYPNVTPGQIELEVLETAALE 1408 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + +++ + G A+DDFGTGY++ +RL AD++KID F+++++ +T D Sbjct: 1409 DIQTTAELFAECRNLGVTFALDDFGTGYSSLTYFRRLPADMLKIDQSFIRNMLDDTDDLA 1468 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV + L A V+AE VET + +L LG QG+ I RP P Sbjct: 1469 IVEGVIGLTHAFKRQVIAEGVETVEHGLVLLLLGCDMAQGFGIARPMPPE 1518 Score = 52.7 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 39/166 (23%), Gaps = 10/166 (6%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL---- 227 L L+ + + ++ + + E+ L V L Sbjct: 239 LSEHTLMSPLKLGLIDDALIDRQALARAREAMLDETARNERYQRALLDNFPFLVWLKDTE 298 Query: 228 -LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 LL AG + L +L + AV + Sbjct: 299 SRLLTANRAMAKAAGSDSVIGKTDRELWPPELASAYRADDLAVMASRQNKIVVEPIIVDG 358 Query: 287 TEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNR--RWHLQAL 327 A +I+ LL V R + + QAL Sbjct: 359 QTVWHETYKAPVIADDGTLLGTVGFARDISERKRAEEAMQLRNQAL 404 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 12/184 (6%), Positives = 26/184 (14%), Gaps = 32/184 (17%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFI 249 I + + ++ + L + + G Sbjct: 551 ALVIERQNSSQDLERSLATFRGIFDSIGEALFIQGEDRRFLDVNTSAEQMFGLSRASLIG 610 Query: 250 IFTLG----VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL-AVLISFSVC 304 + E + + L Sbjct: 611 QTHESLIAPGMLDLEAIDQAISTALAGTPQAFETLARSSTERIFPIEVRLHTASYFGRPV 670 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-----KSFC-----C 354 L+ + R D L QA + Sbjct: 671 LIASAVDISERKNAELRLE--VEHD----------LAQALASGMQRDEVLGALLKAIQRF 718 Query: 355 LRID 358 +D Sbjct: 719 PDLD 722 >UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B3_MARMS Length = 734 Score = 658 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 99/556 (17%), Positives = 200/556 (35%), Gaps = 28/556 (5%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLV--------PVF 247 + + + E R L + + + + GY Sbjct: 161 KERESELIDAEIRVNEALKLTKVGIWEWNVDKDIWFATPSYFTMLGYAPVEGMADRKAEL 220 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA----VLISFSV 303 I + N+ + S Y + Sbjct: 221 EKIHPEDRQHVMDSVNNILTSKSESNYYKYQARIRHIDGNYRWIGVRCIVTEFDQEDKPA 280 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA----LEQAPEQEAGKSFCCLRIDN 359 +L + + + + A D LT LPN A + + + + +D+ Sbjct: 281 RMLGVRIDIDEIQKAHDQVEWLAHHDSLTKLPNRVALNKTFHKIIKPNTKIALLFIDLDH 340 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV- 418 + ++ G + + ++ + L+ + + G E +++L E ++ Sbjct: 341 FKNVNDTLGHSIGDQLLLTVADRMRTLVNNIGYVARQGGDEFIILLPADNEECLIEKTCA 400 Query: 419 -NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 S + + + + + N E L + + Sbjct: 401 IKEALSARYNIDQHQFFITPSIGVSLYPRNGEDFDTLYQRADAAMYHAKHTGRNR-YAFF 459 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 E + +T+ + L N + A+++ + L+ QP + + G + ++ + G ++ Sbjct: 460 TEEMQAISTRALTLGNALHDAIERQEFSLHYQPQISLITGKIIGAEALIRWHSLELGHVS 519 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRI 593 P +F+PL + VL + L + R +VNL ++ + Sbjct: 520 PGEFIPLAEENGQILAIGEWVLRETARQLKQWLEEGITPVRIAVNLSYAQFQVNDLPSIV 579 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + Y + Q + LE+TE A + E ++ +E + G +IDDFGTGY++ L+ Sbjct: 580 EAILNEYAVPAQYLELELTERIATKDPEHTITILESFQQLGIHTSIDDFGTGYSSLSYLQ 639 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R +KID FV+++ TNT D +IV +I LA+ ++ +AE VET+ Q +L+ +G Sbjct: 640 RFPVYKLKIDQSFVRNMTTNTNDQVIVGTIILLAQQLGMTTIAEGVETKAQLEMLYNIGC 699 Query: 714 QYLQGYLIGRPQPLAD 729 +QGY I RP P + Sbjct: 700 DDIQGYYISRPIPAEE 715 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 658 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 105/570 (18%), Positives = 211/570 (37%), Gaps = 34/570 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL------LCTPYENDFIAG 241 ++ + + E R + A ++L+ + G Sbjct: 349 QLQSANATLEEKVATRTRELQISEARFRQMFEHHASPMMLIDPLGGAVVDVNQAAAEFYG 408 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-S 300 Y + + + ++ + + + Sbjct: 409 YRIAEMQAMNIAQINLQTEEDCRPQQTKGNCFFFSHQL----ASGEVRLVEVHSSPVEVD 464 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 L ++V L + H A D LT LPN R L + Sbjct: 465 SRPLLFFIVHDITERRHLEEKMHDLAFYDLLTKLPNRRLLLDRLEKALLSGTRSRHHSAL 524 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---- 408 L +D+ + ++ +G + + + +L ++E + + G E ++++ Sbjct: 525 MFLDLDHFKVLNDLHGHDIGDQLLVEVANRILGCIREQDSAARFGGDEFVVMIEDLSENL 584 Query: 409 -ETEGRLQHMVNIL---NSRQIHWN-NTGL---DMGYGAAWGRFDGNQETLQPLLGQLSW 460 + + + + + + F ++E L+ LL Sbjct: 585 SDAVNQADSVAEKIRCALAAPYLLKRGEEVISHHCSSSIGVTLFRDHEENLEQLLKWTDM 644 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEG 518 + + + ++ + L N + TAL++ L+ Q + EG Sbjct: 645 AMYHAKDAGRN-VIRFFDPVMQTAIENRAALENDLHTALEERQFELFYQIQVDRDGRAEG 703 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 + +L G+++P +F+PL L VL+++ +A +++ +VN Sbjct: 704 AEVLLRWRHPQRGLVSPAQFIPLAEDTGLIVPIGEWVLDTVCAQIAKWQGEQRNLVIAVN 763 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + Q N + ++ +R+ +SP + LE+TE N + ++ ++ L FG + Sbjct: 764 VSAKQFRQSNFVELVQQIIQRHQVSPALLKLELTESLVLDNIQDTIDKMKVLKAFGVSFS 823 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LK+L D IKID FV+DI T+ D ++V++I DL + V+AE Sbjct: 824 MDDFGTGYSSLSYLKQLPLDQIKIDQSFVRDIATDKTDLVMVKTIVDLGVNFEMDVIAEG 883 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VE++ Q LL + G QGYL +P P+ Sbjct: 884 VESEVQLGLLKQCGCSRFQGYLFSKPVPVE 913 >UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Burkholderiaceae RepID=B2JUP6_BURP8 Length = 980 Score = 658 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 104/562 (18%), Positives = 195/562 (34%), Gaps = 28/562 (4%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFF 248 + A + +E + TL + ++ AG + Sbjct: 403 ASLEQTVAERTAELVSRELESRTLIENSPDTITRYDRDLRRTYANPAFCSSAGRSLGEAL 462 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FS 302 G + +++ + +L E L I Sbjct: 463 GKRPSEIPGGANALIYERKIGEVIASGKSGQFELRWLSKDGQEQCSHIRLTPEIDPSGKV 522 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 +L + R QA D LT LPN + + EQ + Sbjct: 523 NSVLAVGRDLSDRMAFEAAIWQQANFDTLTQLPNRQMFQNRLEQEAKVAQRSGHRMALML 582 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G + R + ++E++ + +L G E ++L + G + Sbjct: 583 IDLDRFKEVNDSLGHDTGDTLLIEAARRITSCVRESDTVARLGGDEFTVILPDIDNCGSI 642 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + S + + + L L + Sbjct: 643 ERIARTIIETLSEPFALGPDEAFISASIGVTVYPDDARELDVLFKNADQAMYAAKNAGRN 702 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 L+ + K++ L + +RTAL LY QPI + + + ++ L Sbjct: 703 R-LNYFTPDLQVAAEKRLRLTSDLRTALPHDQFRLYYQPIVDLSTGDIFKAEALIRWLHP 761 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 + G+++P F+PL L V ++ + SVN+ P+ + Q Sbjct: 762 ERGMVSPLDFIPLAEDTGLIVPIGEWVFRQAVQQAKLWRQRFHPSFQISVNMSPVQIRQD 821 Query: 588 N-IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N + R + Q++ +EITE + + G RI+IDDFGTGY Sbjct: 822 NQLGALWSDYLTREGMPGQSIAIEITEGLLLHADLNIDARLATFRHAGIRISIDDFGTGY 881 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKR D +KID FV+++ + + + ++ LA L V+AE VET +Q+ Sbjct: 882 SSLAYLKRFDIDFLKIDRSFVQNLGFDADNQALCEAMVVLAHKLGLKVIAEGVETVEQRD 941 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L +G + QG+L +P P Sbjct: 942 FLTAVGCDFAQGFLYSQPVPPD 963 >UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=A8H0J8_SHEPA Length = 839 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 92/555 (16%), Positives = 188/555 (33%), Gaps = 28/555 (5%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFF---IIFTL 253 + + + A + + V++ + I GY Sbjct: 275 ASHKAAKDQLELASRVFENSVEGVIITDVDGAIIDAHGAYSEITGYTKEELLGQNPRVLN 334 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVR 310 + F + + + + + + ++ + + + Sbjct: 335 SGRHKKAFFTEMWNDLLSKGKWHGEIWNRRKSGAIFPQMLNISAVYDIEHQIRFFVAVFN 394 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 + A DPLT LPN AL EQ + +D + Sbjct: 395 DISAQKQSEAELAKVAFHDPLTKLPNRMALNTGLEQELKQASHSNTRLGLVYIDVDLFKQ 454 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---N 419 ++ YG + + + R + + +L E L+L ++ L + Sbjct: 455 INESYGHPVGDEVLLEVSRRFSQSLGDLVTAARLGSDEFALLLPNIDSNDALLQQINNLR 514 Query: 420 ILNSRQIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + + + + + LL ++ Sbjct: 515 KVFDQPFILGEHGQARLTSSMGVAIYPDDAQDPSGLLVNAEIAMHRAKQDGRNNC-AFYT 573 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTP 535 E ++ ++ ++ L + + A++ L L QP + G++ +L G ++P Sbjct: 574 ESLNQESVAKLKLQSALHDAIELNALYLVYQPKISFVTGDVVGFEALLRWDDPAFGAVSP 633 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRII 594 F+PL + L VL+ + R +VN+ + + + + Sbjct: 634 AVFIPLAEKIGLIQDIGRWVLKRACEQGQRWREQGVNFGRIAVNVAGQQIQRSSFVDEVA 693 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 K+ + + LE+TE S E ++ +L G ++IDDFGTGY++ LK+ Sbjct: 694 ETLKQTGLPASCLELEVTESYMMSEPELVSQDLAKLGLMGVELSIDDFGTGYSSLSYLKK 753 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L +KID F+ + +T + I ++I + A +L VVAE VETQ Q L Sbjct: 754 LPIHKLKIDQSFIAGLPLDTHNTAIAKAIIAMGHALNLKVVAEGVETQAQADFLKDNLCD 813 Query: 715 YLQGYLIGRPQPLAD 729 + QGY +P+ + + Sbjct: 814 HAQGYFYSKPKLVEE 828 >UniRef50_A3WPN1 Signaling protein with a ligand-binding sensor domain, PAS, GGDEF andEAL domains n=1 Tax=Idiomarina baltica OS145 RepID=A3WPN1_9GAMM Length = 1135 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 100/544 (18%), Positives = 193/544 (35%), Gaps = 23/544 (4%) Query: 207 SLGKEKRAFTL---SWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGKL 258 + ++R L + + + + I GY Sbjct: 579 IINSDERIDMLATSLTNISDGICIFDRFFRKREINTAYERITGYQREQVIGQAFALPHYD 638 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRS 315 R + V + E L L + + S + + Sbjct: 639 RDFTDQIKHTVLREGSWSGEVTDFNADGAELLLELTLDAVRNDSGEIKLIVASFSDITER 698 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALE----QAPEQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + TD LT LPN + + + +D+ + ++ G + Sbjct: 699 RNTENELRRLSNTDSLTGLPNRSYFQVSHSNLVRKRVAHALLLFDLDDFKRINDSLGHEV 758 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 + + L L + + LY+L G E +++ + + + ++ Sbjct: 759 GDELLCRVADRLAELGRRQDTLYRLGGDEFGILIEDNTDINVISTIAQQVNTEIAKAYRI 818 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + +G + + T Q LL + + ++ ++ Sbjct: 819 KGHEIALGSSIGIVLYPHDAHTSQELLQKADTAMYHAKQRGGN-CYQFFNASMNENAIQR 877 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 ++L + +R A+ + +Y QP G + + G ++P +F+PL + Sbjct: 878 LVLESQVRHAIRTHQVEVYYQPKMEIATGHISGIEALARIRDEYGQFISPAQFIPLCEET 937 Query: 546 NLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L QVL + + + ++NL Q ++A I ++ + + P Sbjct: 938 GLIIPLSEQVLRTACRDMRQLLTLQGAPRSVAINLSARQFTQSSLALFIEQVLQEEEMHP 997 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + EITE S+ E ++ +E L G ++A+DDFGTGY++ LKR +KID Sbjct: 998 RHIEFEITEGMVMSDPERAIAMLENLADMGVQLALDDFGTGYSSLAYLKRFPMHTLKIDK 1057 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV DI + D +V SI +A L VVAE VE + Q +L +L +Y+QG+ +P Sbjct: 1058 EFVDDITFDERDRKMVESIIGMAHNLGLKVVAEGVEEKAQLDILEQLQCEYIQGFYFAKP 1117 Query: 725 QPLA 728 Sbjct: 1118 MSAE 1121 >UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Piscirickettsiaceae RepID=Q31EA2_THICR Length = 1289 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 107/550 (19%), Positives = 199/550 (36%), Gaps = 27/550 (4%) Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVG 256 + + A ++ A +++ +L I GY Sbjct: 722 RQAEERLNLAASVFTHAREGIMITDKHARILDVNKGFTQITGYEREEVLGLNPNILNSGC 781 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + + + + + + T Y + + + L + Sbjct: 782 QSKEFYNLMWKTLFEEGHWSGEIWNRNKNGTVYPQMITITAIKNSDGMTQNYLALFTDIT 841 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + R+ A D LT LPN L + + + +D + ++ Sbjct: 842 SLKEQQRQLEHIAHYDALTQLPNRSLLADRLQQAIFASQRHNSLLAVLFIDLDGFKKVND 901 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 +G + + + + +++E + L ++ G E ++VL + + ++ L Sbjct: 902 LHGHDAGDELLVELSKRMKNILREEDTLARIGGDEFIVVLVNLDAPSDCEMILRRLLEST 961 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S + + + + + L+ Q+ + + Sbjct: 962 SESVDIEGEVVSVSASIGVTFYPKDNVDADLLMRHADQAMYQAKQSGKNR-YHYFDVQMD 1020 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 Q + N I+ AL++G+ LY QP N G + ++ G++ P +FL Sbjct: 1021 SMLQSQSAIQNEIQDALNKGEFELYYQPKVNLAQNIVIGVEALIRWNHPKKGLLVPIEFL 1080 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 P I S D V+E+ LK ++ SVN+ L QKN + RL + Sbjct: 1081 PFIENHPFSVELDQWVMETALKQMSEWRAQSLEMSISVNVSAYFLQQKNFIQILERLLSQ 1140 Query: 600 Y-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 Y + ++ +E+ E A N + + G A+DDFGTGY++ L+ L A Sbjct: 1141 YSDLPKFSLEIEVLETTALENISNISDLVHICRDMGVNFALDDFGTGYSSLMYLRHLPAR 1200 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 IKID FV+D++ + D I+ I LA + V+AE VET L +G + +QG Sbjct: 1201 TIKIDKSFVRDMLVDMDDRAIIDGILKLASVFNREVIAEGVETVAHFEALLDMGCEQVQG 1260 Query: 719 YLIGRPQPLA 728 Y I RP P Sbjct: 1261 YGIARPMPAD 1270 Score = 60.0 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 16/174 (9%), Positives = 43/174 (24%), Gaps = 22/174 (12%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 L L AV +L +L I Q ++ + ++ +A + + + Sbjct: 174 LILVLAVFTQAILILFLFYDISRRKQLQAELKQVATTLTNIMDSSTEVAVIATDTEGV-I 232 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL----------------- 272 + + GY T +S Sbjct: 233 TEFNSGAEKLLGYSAQELVGKETPLKFHSEKEIQARAQRLSEALKRPVKGFQVFTEKLKE 292 Query: 273 -CLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRW 322 ++ + + ++ I+ ++ + V L + + + Sbjct: 293 DSPQDHEWTYARKDGVLVPVSLIVTPILDENHQKVGYLGVAQDVTELRRSQQAL 346 Score = 58.4 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 8/143 (5%), Positives = 31/143 (21%), Gaps = 13/143 (9%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVF 247 + + K++R + + + + + + + GY F Sbjct: 457 LARDVTARVQQSKELVEKDERLELILSASKIGQWDWDIESNVMLWDERSCTMLGYPPEAF 516 Query: 248 FIIFTLGVGKLRYPFL----NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL----I 299 + + L L + + G + + + Sbjct: 517 KMDYDKWASLLHPDDAYVMKRLKAHLEKGEAYSVEYRIRSGDDDWVWVESQGQTIESDAK 576 Query: 300 SFSVCLLYMVRIYHRSEWLNRRW 322 + ++ + + Sbjct: 577 GRPIRMVGIYMDITDRKRSEDLL 599 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 12/145 (8%), Positives = 31/145 (21%), Gaps = 14/145 (9%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFII 250 +R + E+R T+ + + + L ++ + G Sbjct: 588 DITDRKRSEDLLVENEERLRTIFEILPIGITLTDREGQIVECNSASEVLLGIPREEHLAR 647 Query: 251 FTLGVGKLRYPFL---------NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 Y +++ + + L L Sbjct: 648 KYDAKEWTIYRADGTAMPSEEYAAVRSLTNQETIKNQVMKVCHSGDCTWLNVSATPLNHP 707 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQA 326 + ++ R +L A Sbjct: 708 NYGVVVTYIDISDKRQAEERLNLAA 732 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 100/547 (18%), Positives = 205/547 (37%), Gaps = 42/547 (7%) Query: 214 AFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPV------FFIIFTLGVGKLRYPF 262 L + + ++ ++ + GY F +I + +R F Sbjct: 28 FEALLRYSTDVIGIINKDGGIIYQSPALAKVLGYTQNEIKGLNSFQLIHPNELHTVRNLF 87 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA--VLISFSVCLLYMVRIYHRSEWLNR 320 +L + + + + + ++ R + Sbjct: 88 DDLVN--NKISKVTKEMRLRHADGSWIFCEVTATNHLFDKKIKGIIVNYRDITERKLYEE 145 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMR 372 H D LT LPN L+ E E + + +D + ++ G + Sbjct: 146 EIHQLVYHDNLTGLPNQYMLDSFLESEIYKAKYECTRLALLIIDLDRFKVINDSIGHTIG 205 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN 429 ++ + + L+ ++ +++ L + G E ++VL + + ++ +V+ + + Sbjct: 206 DQLLKEVGKRLVSIVSKSDLLVRKGGDEFVIVLPSIK-KDQVLKVVDNIINLLTSPFKIK 264 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE-----MVSGQ 484 + + F + +T L + Q+ ++ Sbjct: 265 SYDIFTSPSIGVSIFPEDGKTKDLLYKHAEFAMYQAKKSG-NGQYHFFSSAEFNGDMNP- 322 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 + +R A++Q L+ QP N E G + ++ G+++P F+P+ Sbjct: 323 ----YTIEVELRKAIEQKQFTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPI 378 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L VLE K SVNL P N+A I Sbjct: 379 AEDSGLIVPIGNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAHTNLASVIKNTLFNTG 438 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P + +EITE ++ ++ +E++ K G +++IDDFGTG+++ LK+ + +K Sbjct: 439 LDPHLLEIEITESMT-ADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLK 497 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV ++ N + IV++I +A+ +L+VVAE +ET++Q A L + QG+L Sbjct: 498 IDRSFVSELHNNPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLF 557 Query: 722 GRPQPLA 728 +P P + Sbjct: 558 SKPLPPS 564 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 10/139 (7%), Positives = 31/139 (22%), Gaps = 11/139 (7%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG-------YLVPVFF 248 ++ E++ ++ + +LLL + + + Y + Sbjct: 707 DITDRKKAEDALQKSEEKYRLIAENMSDLILLLNVEGRVKYVSPSHKKYIGPKYENLLGK 766 Query: 249 IIFTLGVGKLRYPF-LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---C 304 + F + NL + + + +I Sbjct: 767 LSFEYCHPEDIMKLKENLVVIMQSKETSQVEFRCWDETRNWRIIEATGTPIIGKDGYVEH 826 Query: 305 LLYMVRIYHRSEWLNRRWH 323 ++ + R Sbjct: 827 IVVVGRDITEKRKTEELLQ 845 >UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K9S9_CYAP7 Length = 1015 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 105/602 (17%), Positives = 205/602 (34%), Gaps = 32/602 (5%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 L + + T + + ++ I A+ R+ Sbjct: 408 LSLEEQIIVERQLRTYLSVKFPLYDPNGLLYGIGGISTDITERKQAEEALRQQANLLDLA 467 Query: 211 EKRA--FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 + + + ++ G + + L L Sbjct: 468 YEAILVRDGNNVITFWNQGAEQLYGWKKSQALGQVSHILLQTEFNLSSPHFDAILRL--- 524 Query: 269 VSTLCLLNYNQNFLQGVETEYSLA---FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + T+ + ++ +L + R + + Sbjct: 525 ---TGHWEGELTHTRQDGTKIIVESRQVLVQDDRGQIKGILEVNRDITERKLAQFQLEHN 581 Query: 326 ALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCI 376 AL D LT LPN L + + + + +D + ++ G ++ H + Sbjct: 582 ALHDALTELPNRLLLMERIQAAIQRAKRKPHYHFALLFIDLDRFKTINDTLGHLVGDHLL 641 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 +I L ++ + + +L G E +++L E + + + NN + Sbjct: 642 VAIATRLQHCVRSGDTVARLGGDEFIILLDDLLEESDAFPITERILGRIKEPLVINNQQI 701 Query: 434 DMGYGAAWGRFDGNQETLQ-PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 F+ + + LL + + + + Sbjct: 702 QTSASIGI-VFNRDGNESETDLLRNADLAMYSAKEQGKSR-YAVFNPTMHLRAHTLWEIE 759 Query: 493 NTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +RTALD + LL+ QPI + G++ ++ G+++P F+P+ + L Sbjct: 760 NNLRTALDGQEFLLHYQPIFSLTTQTLVGFEALIRWRHPVRGLISPMDFIPVAEETGLIV 819 Query: 550 RFDLQVLESLLKWLATHPCDKKGPR---FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VL+ + L G + S+NL L N I ++ ++ +S + Sbjct: 820 PIGEWVLQEACRQLLHWQELNPGAKCCFMSINLSSRQLESGNFIAVIDQILQQTPLSAKN 879 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE N E++ + +L ++IDDFGTGY++ L L D +KID F Sbjct: 880 LKLEITETLLMKNLEAASALLLELKNRAIGVSIDDFGTGYSSLSYLCHLPVDSLKIDRSF 939 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V + ++++I LA +L V+AE +ETQ LH L +Y QGY + +P Sbjct: 940 VAKMDKGRESLQVIQAIISLAHQLNLEVIAEGIETQDHLTQLHHLKCEYGQGYFLSKPLD 999 Query: 727 LA 728 Sbjct: 1000 SE 1001 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 88/335 (26%), Gaps = 28/335 (8%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAI---------IHSSYIFLAWMPLCVMLSILFIFGWRG 63 IF + + + + + L I + YI+ + + + Sbjct: 136 IFMGSALWVLAIKPVRFRLVQLLISITSIISIQVLVGYIYQVKPLVGLASNNQVAIHTSI 195 Query: 64 VVPVLC-GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW 122 + +LC G+ C N + + + G +L A IL LG W + Sbjct: 196 LFLLLCVGILCANPCKGWMRLIASNSAGGIIARSLLPAAFIL--PLGLGWLVEGSGWMDV 253 Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 ++ I + + L + + + + + DL L Sbjct: 254 AFGQSFHVIGNIVVFIGLILYCAKELYRMDLQRHRAEEALRSAYDDLD------LKVQER 307 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYEND 237 L + + +R A +K T + ++ L L + + Sbjct: 308 TSKLFQAYETLAAEIEERKRAEAAQKASQKNLQTFIDNTSAAIYLKDLQGKFLLVNRQLE 367 Query: 238 FIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL--QGVETEYSLA 292 + G +N + L+ + + + + T S+ Sbjct: 368 KLVGLKREQMIGKTDGDVFPEDIADAFVVNDRQVLQAGESLSLEEQIIVERQLRTYLSVK 427 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 F L + + + QA Sbjct: 428 FPLYDPNGLLYGIGGISTDITERKQAEEALRQQAN 462 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 114/581 (19%), Positives = 214/581 (36%), Gaps = 32/581 (5%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL---- 229 + + RM+ + +++ L T+ A+ + +L Sbjct: 371 RGRAVERDAAGRVRRMLGTRRDVSARRQQEQEQRLAA-----TVFEAASEGIFILDPDYR 425 Query: 230 -LCTPYENDFIAGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 L + GY +G ++R + + + + Sbjct: 426 VLAVNRAFSAVTGYSREEVVGRTVTSLIGSREMRRQYQMIRQELDGSGSWQGELIETRKS 485 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 Y L ++ S ++ R + D LT L N ++ Sbjct: 486 GELYPQWLQLNLVRDASGRPSHIVGFFADLTARREAEERLRYLSHYDELTGLANRSLFKE 545 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + + +D + ++ G + +R + R L + E + + Sbjct: 546 RLHEASQRARQSGRSIALVHIDLDRFKLLNDSLGHEVADQLLRQMSRRLTQAVPEADCIA 605 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E ++L + L + + L ++ + L + + Sbjct: 606 RLSGDEFAILLDAYGSLSSLARVASRLLAKLRLPMDVGGHELVVSASLGISLLPDYAREI 665 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ Q + + + + + T +++ L N +R A+++G L ++ QP Sbjct: 666 GALISQANMAVQHAKHLGGN-TFQFFTDNLQACTLERLQLENQLRKAIEEGQLEVFYQPK 724 Query: 512 RNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 N + + ++ G++ P +F+ L + L A VL + Sbjct: 725 LNLADDQLNAAEALVRWRHPQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQWQQ 784 Query: 569 DKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R SVN+ L Q N+ + ++ + ++PQ + LE+TE Q N +S + Sbjct: 785 QGLAEIRVSVNISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTF 844 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 QL + G ++AIDDFGTGY++ LKR +KID F++D+ DA I R+I +A Sbjct: 845 RQLRELGVKLAIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMA 904 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L VVAE VETQ Q L +QGYLI RP A Sbjct: 905 HSLELKVVAEGVETQAQMDFLKSQNCDEIQGYLISRPVEAA 945 Score = 80.4 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 31/364 (8%), Positives = 69/364 (18%), Gaps = 40/364 (10%) Query: 1 MFVEHNLIKNIKIF---TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILF 57 + + L ++ ++ + + L + L +++ L F Sbjct: 45 LMLLVGLACSLLLWREGSAPLLAGWLAWVLLLVLLRLTQVNAFNAALPSRQAESYWRRNF 104 Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 +FG G + L + + Q V ++ + A Sbjct: 105 LFG-AGASGLTLAFAVIVLVPPDVFYQQALVYGLIAAAILSASVAYAVSLSAFLTFALPC 163 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV---VDLLSLFT 174 L G ++ + + +L Sbjct: 164 LLPSAAFLLLSDNSLQRGWGLLSVILFLALLVVAWQVNRLVQRSLLQRFHNQALIANLEH 223 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWR------------------RDIAPSLGKEKRAFT 216 A L L R + A+ R + R Sbjct: 224 AKQRAEGLNEELAREVEQRRRAERELRGAHGELEMRVAERTLELDEATHALGKSQARLAL 283 Query: 217 LSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV-- 269 + L + L + + V ++ L L A+ Sbjct: 284 ALEASELGLWDWDLESDQVHHSHLRELFGLEPEQVQVMLRDLTPRLHPDDLPRLRRALVE 343 Query: 270 ---STLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRW 322 + + +L R + Sbjct: 344 HMKGRSEDYQIEYRVRHVDGHWVWVEDRGRAVERDAAGRVRRMLGTRRDVSARRQQEQE- 402 Query: 323 HLQA 326 A Sbjct: 403 QRLA 406 >UniRef50_B2J301 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=8 Tax=cellular organisms RepID=B2J301_NOSP7 Length = 824 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 100/560 (17%), Positives = 204/560 (36%), Gaps = 30/560 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFI 249 ++ +A +++ L A + + + + G F Sbjct: 248 QDITERKQILAALARRQQEFKALVENAPDIISRFNTQLRYVYVNPAIEKVTGISAETFIG 307 Query: 250 IFT----LGVGKLRYPFLNLTWAVSTLCLLNYNQNF-LQGVETEYSLAFILAVLISFSVC 304 L R L T + + Y + + SV Sbjct: 308 KTNAELNLPEEFCRMCDRKLGQVFQTKQETEFECTLAIAAQTRHYHTRLVPELASDESVY 367 Query: 305 LLY-MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCC 354 + + R + + A D LT LPN + E+ + Sbjct: 368 FVLSISRNITALKLAEAQLIHDAFHDILTSLPNRALFMERLERALMLAKRRADYTFAVLF 427 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G M+ + ++ R L ++ + + +L G E ++L Sbjct: 428 LDLDRFKVVNDSLGHMIGDQLLTALARRLENCVRAGDTVARLGGDEFTILLDDINNINDA 487 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 +V + + + + G+ + +L ++ A Sbjct: 488 IGVVERIHEALTSAFTLSGYEVFTTVSIGIVVSKGSYNLPEQILRDADIAMYRAKALGKA 547 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 + + + Q TK + L +R A+++ + +Y QPI + G++ ++ Sbjct: 548 R-HEIFDSTMYTQITKLLELEMDLRRAVERQEFQVYYQPIVLLETCKIIGFEALVRWQHP 606 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLL 585 G++ P+ F+P+ + L VL + + SVNL L Sbjct: 607 QHGLVPPESFIPIAEETGLIIPLGYWVLGEACRQMRAWQIQFPTDPPLTISVNLSTKQFL 666 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q ++ +I ++ + + + LEITE N +S+ + + QL + ++ +DDFG G Sbjct: 667 QPDLIEQINQIMQETALEASNLKLEITESVLMENIQSATFMLLQLQQMNIQLHLDDFGIG 726 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L R + +KID F+ I N + IV++I LA++ ++ V+AE +ET +Q Sbjct: 727 YSSLSYLHRFPSHALKIDRSFITKIGANGENLEIVQAIITLAESLNIDVIAEGIETVEQL 786 Query: 706 ALLHKLGVQYLQGYLIGRPQ 725 + L + +Y QGY +P Sbjct: 787 SQLRAMKCKYAQGYFFSQPL 806 Score = 52.3 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 13/141 (9%), Positives = 35/141 (24%), Gaps = 18/141 (12%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGY---------LVPV 246 R E+ T+ +V+ + + G+ V Sbjct: 123 HRTEKKIKQNEQWLTTVLKSIGDAVITSDASGTVTFMNPIAEELTGWNYSDAFGKEATEV 182 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL- 305 F I + P + + T+ L + E + +A + + + Sbjct: 183 FNIAHEETRIIIESPITQVLQSGITVGLPEQTI-LITKNGAEIPIDDSIAAIKDDNGNIT 241 Query: 306 --LYMVRIYHRSEWLNRRWHL 324 + + + + + Sbjct: 242 GAVLVFQDITERKQILAALAR 262 >UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88HN4_PSEPK Length = 733 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 117/618 (18%), Positives = 219/618 (35%), Gaps = 35/618 (5%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + L + + G F + ++ + + + R+ + Sbjct: 114 FRSLALGYNLRSCWSLPLLSHEGSVLGTFALYQDQAIAPSEVQ-------IHRLTCAAQL 166 Query: 196 AQILWRRDI--APSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 A I R + E+R +L V L ++ AG + + Sbjct: 167 AAIAIRHERDGQRLEESEQRFRSLFTYNPNPVFALDRAGNIQSVNPAGLKLKAGAATDLV 226 Query: 254 GVGKLRYPFL-------NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA---VLISFSV 303 G F +A + + + + I ++ V Sbjct: 227 GHHFSHLVFEEDLPKVNQHFFAARAGEPQRFEARVRDESDDKQLIMDIANLPIMVNGEIV 286 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + R + + R+ + A D LT L N +LE +++ + + Sbjct: 287 GVFGIARDISKQKHYERQLSINASHDGLTGLLNRLSLEDRLVQACRSSRQRKVQLAVMYI 346 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + L ++ + + ++ G E +++L+ + Sbjct: 347 DLDGFKSINDSIGHYFGDQVLIEVAQRLTQQVRPADTVVRMGGDEFVVLLTDLLRDEDAV 406 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L + + L + DG+ E L+ Q ++ Sbjct: 407 PVAERLLASIGKPYCIQGIDLHVSTSIGITVSDGHIEQPMKLIQQADMAMYKAKQQGRN- 465 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 ++ + + L N ++ A+ L+ QP + G + +L Sbjct: 466 NFQWYTSDLNHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIEARTRRVVGIEALLRWEHPV 525 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN 588 G ++P F+P+ L VL++ L +VN+ P+ Sbjct: 526 RGFISPAVFIPVAEDSGQIIPLSLWVLDTACAQLRDLCDQGFNGISMAVNISPMHFQCGQ 585 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 I + ++ +S + LEITE N E ++ + +L G RIA+DDFGTG+++ Sbjct: 586 FVECIQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLGVRIALDDFGTGFSS 645 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK L D IKID F++DI TN DA I + I +A SLSVVAE VET Q L Sbjct: 646 LSYLKCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFL 705 Query: 709 HKLGVQYLQGYLIGRPQP 726 + LQGY RP Sbjct: 706 ERGRCDILQGYYFARPMS 723 >UniRef50_UPI00016AFAA6 predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA6 Length = 709 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 116/646 (17%), Positives = 238/646 (36%), Gaps = 31/646 (4%) Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKC-----SMYLVGSFFDFPLKISTFFGDADAIFTVVD 168 ++ V L L ++ P + + + ++ D + Sbjct: 48 AIRRAQLVVPDLVLLDVMMPGIDGFETCRRLKAIDHTRDAPVIFMTALSDVQDKVAGFAA 107 Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 + + + ++ AQ A E R L A+ ++L+ Sbjct: 108 GGIDYLTKPFQIVELAARVKTHLALRAAQRQLVLANARLASSEARYRRLFETASDGIILV 167 Query: 229 LL------CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL--NLTWAVSTLCLLNYNQN 280 + + G+ F V +L ++ + Sbjct: 168 DMAGSRITDVNASLVEMLGFERDHFVGRPIGSVPPFEAVPECASLCATLAASGEIRCEHT 227 Query: 281 -FLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 T + F+ ++ ++ VR + R AL D LT LPN Sbjct: 228 SLATATGTLLDVEFLASLYTVGGARIVQCNVRDITERKQAEARVRYMALHDALTGLPNRA 287 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L++ + + L +D + ++ G + + + L ++E Sbjct: 288 LLQEHLAQAIARARREGGCVAALMLDLDRFKHVNDSLGHHIGDRLLEAASMRLRGCLREG 347 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E ++ L+ + + + + SR N L +G R+ + Sbjct: 348 DTVARLGGDEFVIGLADVDGDQGAGEVATRVLTTLSRPFFVENHELHVGCSIGISRYPAD 407 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E +Q LL + A+ ++ +++ L IR A D+G+ +L+ Sbjct: 408 GEDVQTLLRAADTAMYDAKANGRG-IYRFFTPELNAAAQQRLALARDIRYAFDRGEFVLH 466 Query: 508 AQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + +L + G+++P +F+P++ + L VL + + Sbjct: 467 YQPQVCTHSGAITGVEALLRWRHPEHGLISPLQFVPMLEELGLIVAVGQWVLRTACQQSV 526 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 R +VNL L + +I + + ++ + + LE+TE A NA+ + Sbjct: 527 QWQSAGLPPVRMAVNLSAYQLQRGDIVRTVDEALRETGLAAEWLELELTETMALYNAQEA 586 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + + + G +++DDFGTG+++ L++ D IKID F++D+VT+ + +V+ I Sbjct: 587 IRIMREFKQLGVSLSLDDFGTGWSSLSYLRQFPIDRIKIDRSFIRDVVTHPGASAVVQGI 646 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA L +AE VET QQ L + +QG+L+ P + Sbjct: 647 MTLANHLGLQCIAEGVETVQQFGFLQERACGEIQGFLVSPALPAHE 692 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 99/430 (23%), Positives = 178/430 (41%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSR 365 E +R A D +T LPN +L Q + + + +D + ++ Sbjct: 424 EQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIFIDLDRFKNIND 483 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---N 422 G + + + L ++ + + +L G E ++VL + H V + Sbjct: 484 SLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISAAHAVRKIQQTL 543 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S+ + L++ + + ET+Q L+ + + + + ++ Sbjct: 544 SQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRN-SYQFFTQEMN 602 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 +++L + +RTAL++ +++L+ QP + E G + +L G + PD F+ Sbjct: 603 LTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFI 662 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ L L+S + LA R +VNL Q N+ + + Sbjct: 663 PVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILA 722 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++ + LEITE A + +++ ++ L + G +AIDDFGTGY++ LK + Sbjct: 723 ATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVN 782 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+ I T++ DA I + LA VVAE VET+ Q L LQG Sbjct: 783 RLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQG 842 Query: 719 YLIGRPQPLA 728 Y P A Sbjct: 843 YFFSEPLSAA 852 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 105/427 (24%), Positives = 186/427 (43%), Gaps = 16/427 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 ++ A DPLT LPN + E S + +D + ++ G Sbjct: 644 EHRKQLSYLAFHDPLTQLPNRLRFTEVLEAAVGDAEGHGRYLSLLFIDLDRFKNINDSLG 703 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + ++++ R L+ + L +L G E ++L T + S+ Sbjct: 704 HSIGDKLLQAVARRTGSLIDSADVLARLGGDEFAILLFNCVTPVVGADTAQRVIDALSQP 763 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 ++ L + + L+ ++ E ++ +T Sbjct: 764 FQIDDYSLHVSASIGITVAPVDAREPDELIKCADIAMFKAKDAGRN-TYKFYERSMNLKT 822 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 + +LL N +R AL + L LY QP + + G++ +L + G+++P +F+PL Sbjct: 823 HELLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPLA 882 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L +L S + + T + + R +VN+ ++ + ++ ++ Sbjct: 883 EETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQTG 942 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + + LEITE + +SS+ + +L K G R+AIDDFGTGY++ LK+ +K Sbjct: 943 VPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLK 1002 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV D++T+ DA I S LA L VVAE +E Q+Q L + G Q+ QGYLI Sbjct: 1003 IDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLI 1062 Query: 722 GRPQPLA 728 RP P+A Sbjct: 1063 SRPLPVA 1069 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/252 (9%), Positives = 50/252 (19%), Gaps = 27/252 (10%) Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFF 147 V +G+ + +L Q + + V + Sbjct: 247 VHIGNVLIIPETGWLVLVSQPKYLAYAEINYLQNLFLFGGVSCVVLSLLVAFAVARRLSQ 306 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 + A + +S F + R I Sbjct: 307 PMTQLETCVKEMARGEWDASVEVSGFAEAKALAQHVRAMGRAIQER----------ETEL 356 Query: 208 LGKEKRAFTLSWLAALSVLLLLLC----------TPYENDFIAGYLVPVFFIIFTLGVGK 257 + R L +V + + + GY F + + + Sbjct: 357 SRERDRFQALFDNVNDAVFMCSVDEEQRVGNFVEVNGVASDLLGYSRAEFLQMTPMDIDT 416 Query: 258 ------LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVR 310 LR +++ + + L L L+ + R Sbjct: 417 TIDSLSLRDHIGSISMESDQPIPGLIETTMVTKQGRKMPFEINLQPLRLDDQQMLVCVAR 476 Query: 311 IYHRSEWLNRRW 322 + R Sbjct: 477 NITDRKQAQRAL 488 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 111/611 (18%), Positives = 214/611 (35%), Gaps = 23/611 (3%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + + S P + + + + L + + ++L R+ + Q Sbjct: 317 RFGLASVDLPPGSTIVGRPPSFWMRHRLLITVLSGMAGLQLLAGWFLWRLSGTRRGTQKY 376 Query: 200 WRRDIAPSLGKEKRAFTLSWLAAL------SVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 A + + + + + G + + Sbjct: 377 LHEKEAQFKTVIRATHDAVVVINERGLVTLFNPAAEELFGWSSAEMLGCNLDILMPEGYR 436 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIY 312 + T S + + E+ + L+V +L ++R Sbjct: 437 DQHRHDVASFFSTGEPSEAVGRSLELLAVHRSGKEFPIELSLSVGKYGHERFVLAILRDI 496 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMS 364 + R A D LT LPN E + + + +DNL ++ Sbjct: 497 SSQRQVEREIKQLAYYDSLTGLPNRALFEDRFRRVLTTADRAGKMAALLFIGVDNLNSIN 556 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 +G ++ I + L+ + Q + + G + +++L G + + Sbjct: 557 DTHGHTYGDKLLKVIGQRLVAVAQNGATVVRWEGDKFVVLLPGLSDAETADTVARQILQS 616 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + ++ + + + LL S + E + Sbjct: 617 IAEPCEVDDQSFFVTASIGGAVYPQHGADGDKLLKNADMAMYASKELGRN-TYCTFTEEM 675 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + + ++ L + +R AL + + L QP + + G + +L + G+++P +F Sbjct: 676 NRRVLERSGLEHNLRLALAREEFFLAYQPQVDQATGKVLGSEALLRWRHAEKGMISPGQF 735 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +PL + L VL++ R +VNL Q + ++ ++ Sbjct: 736 IPLAEESGLILPIGHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQFQQPDFFDQVAQVL 795 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 K + P+ + LE+TE ++A+ ++ + L G IAIDDFGTGY++ LK Sbjct: 796 KDTELDPRYLELELTESLLMADADVAVETLRALRDLGVGIAIDDFGTGYSSLSYLKTFPI 855 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D IKI FV DI + DA IV ++ +A L +VAE VET+ Q L Q +Q Sbjct: 856 DRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQLEFLRARRCQVMQ 915 Query: 718 GYLIGRPQPLA 728 GY GRP P Sbjct: 916 GYYFGRPMPAE 926 >UniRef50_B3E7G7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E7G7_GEOLS Length = 860 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 107/594 (18%), Positives = 198/594 (33%), Gaps = 27/594 (4%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI--LWRRDIAPSLGKEKRAF 215 + L + +F L R V A + E+ A Sbjct: 255 AGYLMPRWIWWTLGGVAGGALLLGIFALLLRREVRRKTADLNHEVEERRKLFAAVEQSAN 314 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTL 272 ++ V + + GY + + +L +S Sbjct: 315 SVVITDTEGV---IEYVNPHFCMVTGYRSEEVIGQKPSLLKSGHQSAELYADLWKTISAG 371 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + + Y +A + + + + QA D Sbjct: 372 REWRGEFRNKRKNGSLYWDLCSIAPIRNEAGEITNFVAIKEDITSRKAQEEILTWQAGHD 431 Query: 330 PLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT L N LE Q S + IDNL+F++ +G + I Sbjct: 432 TLTGLYNRYFLENHLTAEIKRMDRQHQTLSLLLIDIDNLKFVNDTFGHDFGDRLLVQIAE 491 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 L + + G+E LV E +VN + S + + + Sbjct: 492 RLKQAACPLSIVGRFLGNEFALVPPLAEGREHAVTLVNRIKQQMSELFVMDGAEVVITVS 551 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F + E LL ++ + + +++L + A Sbjct: 552 IGVVVFPDDGEDADTLLRNAEAAMYEAKRQGRN-TIVWYTTDFHKRAQYRLMLAARLHRA 610 Query: 499 LDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + D L QP + G + +L D ++P +F+P++ + L V Sbjct: 611 FENSDFTLQYQPQISTQDNTVIGVEALLRWTPADLPPVSPMEFIPILEETGLIVPVGTWV 670 Query: 556 LESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L A R SVN+ + + ++ + + + P + LE+TE Sbjct: 671 LYQACHQAAAWQRAGLPRMRLSVNISAVQFQRGDLGETVRMVLAETGLDPALLCLELTES 730 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + S +++L G R+A+DDFGTGY++ L RL +K+D FV+ + Sbjct: 731 MLMIDTAQSQQKLQELRDLGVRLALDDFGTGYSSLAYLSRLPVQELKVDQSFVRRLHDTP 790 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D +V ++ +A+ L+++AE VE+++Q++ L G +QG+L RP P Sbjct: 791 SDTAVVNTVIAMAQELGLTLIAEGVESEEQKSHLIGRGCTIIQGFLFCRPLPPD 844 >UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 Length = 1578 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 112/568 (19%), Positives = 209/568 (36%), Gaps = 34/568 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE-----NDFIAGYLVPVFFI 249 +R E+R A L L T I GY F Sbjct: 1004 QLDQANQRAQNQLGENEERLRLALEAANQGFYDLNLQTGQAVVSPQYGQILGYDPQYFQE 1063 Query: 250 IFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAVLI---- 299 + ++ + + L + ++ Sbjct: 1064 TEQRWLERIHPQDQQRVREIYDQYIQGKIPRYAVECRQRTMAGQWKWLLSLGKIVEWDSQ 1123 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-------- 351 + +L ++ + + A DPLT LPN R L E + Sbjct: 1124 GKPLRMLGILTDVTERKQAEAQIENLAYYDPLTALPNRRLLLDRAENALALAQRSKHFGA 1183 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G ++ + + L +++++ + +L G E +++L + Sbjct: 1184 IVLIDLDGFKTLNDARGHDSGDRLLQMVAKRLADSLRDSDTVARLGGDEFIVLLPELAHD 1243 Query: 412 GRLQH-----MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 L + + + + + F E + L + Sbjct: 1244 RELAARLGLGVGEKIRQALATPFTLEAEQVQISGSIGITLFPKLNEKVSDLFKEADTAMY 1303 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDE 521 Q+ + E + + + L +R+AL+Q +Y QP + G G + Sbjct: 1304 QAKKAGRDK-VCLFESQMQLEVESRFALEADLRSALEQKQFQVYLQPQVDSHGVWIGAEA 1362 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 +L G + P+ F+P+ + L VLE + ++LA R ++N+ P Sbjct: 1363 LLRWNHPGRGFIPPNIFIPIAEEIGLIGGIGDFVLEQVCQYLARLQQLGLTLRIAINVSP 1422 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q N A I L + P + LE+TE + ++ + +L G ++DD Sbjct: 1423 RQFRQANFAKEIKNLLACTGVDPYRLTLEVTEGLIVEDTHQAIATMFELQTLGIHFSVDD 1482 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL + +KID FV+D + +A +V +I +A+ +L++VAE VET Sbjct: 1483 FGTGYSSLSYLKRLPLNELKIDRAFVQDAPQDLNNAALVEAIISVARTFNLAIVAEGVET 1542 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q L +LG + QGY GRP P+ + Sbjct: 1543 EEQVQFLAQLGCNFYQGYFYGRPMPIDE 1570 Score = 65.8 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 20/183 (10%), Positives = 46/183 (25%), Gaps = 15/183 (8%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDF 238 L + + E+ + ++ + +L Sbjct: 685 ALLNTVSQFLSRFLESHYTEIILERNERNYREIFNSTHEAIFIQDAHQATVLDVNQPMLT 744 Query: 239 IAGYLVPVFFIIFTLG------VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + GY I +G GK + + + + Sbjct: 745 MYGYGNKEEVIGRPIGDFSADKPGKTEAEIEQKLRQARNAEPQMFEWLAKKQDGSLFWAE 804 Query: 293 FILAV-LISFSVCLLYMVRIYHRSEWLNRRWHLQA-LTDPLTLLPNFRALEQAPEQEAGK 350 + +I LL +VR + +R + L L+ + N +E + + Sbjct: 805 VSIQPTVIDGKSRLLAVVRDISERKQNQQRIEYLSRLYATLSQV-NRAIIENRERDDLFR 863 Query: 351 SFC 353 + C Sbjct: 864 AIC 866 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 121/594 (20%), Positives = 210/594 (35%), Gaps = 38/594 (6%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 VDL+ + + + I + + R+ P Sbjct: 449 WVDLMVSPLRLEGQPEHHLAVVQDISKRKHMEQVLRQSEEPLRNILNHMPVGVNQVQDGK 508 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGV-----GKLRYPFLNLTWAVST-------LC 273 ++ + I GY + + T R A T Sbjct: 509 IVFR---NDRHVQICGYDIREAPDVDTWWRLVMPDAHQREHAREAWHAACTAALKNPDGA 565 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + ++ +L + + + + A DPLT Sbjct: 566 IRTVECVITAKSGVRRAVELSGMILGDS---HIVTMVDQSQRKAAEEEVRYLAYNDPLTG 622 Query: 334 LPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN R L + + L +DN + ++ G M +R + R L Sbjct: 623 LPNRRLLLDRLEQALAMSARHQLCGAVMMLDLDNFKTINETQGPDMGDRLLREVARRLRD 682 Query: 386 LMQENEKLYQLPGSELLLVLSGPE-TEGRLQHMVNIL-------NSRQIHWNNTGLDMGY 437 + E+E L + G E ++VL + + + Sbjct: 683 CVPEDETLARHGGDEFVVVLKDLGADPQEAANRAEEMGQTILAAIRAPFDIDGQQHHTAL 742 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F G +E+ LL + ++ A L + + +++ L +R Sbjct: 743 SVGIAIFRGVRESADELLKRSDLAMYEAKAAGRD-TLRFFDPQMQAAVSERAALEADLRA 801 Query: 498 ALDQGDLLLYAQPIRN-KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 LD G L L+ QP + G + ++ D G ++P +F+PL + L R V+ Sbjct: 802 GLDAGQLELFYQPKVDQGRITGAEALVRWRHPDRGFISPAEFIPLAEESGLILRVGEWVM 861 Query: 557 ESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 S LA +VN+ P + + +++ + + LE+TE Sbjct: 862 RSACAQLAQWSAHPVLGELTVAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEG 921 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + E ++ + QL +G ++DDFGTGY++ LKRL +KID FV+D++T+ Sbjct: 922 MLLQDVEDTIAKMVQLRGYGVGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDP 981 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DA+I R+I L + L VVAE VET+ Q+A L + G QGYL+ P A Sbjct: 982 NDAVIARTIVALGTSLGLRVVAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAA 1035 >UniRef50_A8UUX8 Preprotein translocase ATPase subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUX8_9AQUI Length = 1010 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 106/565 (18%), Positives = 212/565 (37%), Gaps = 31/565 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLV 244 +V ++ + + VL+ + + I+GY V Sbjct: 445 LVREIADEVSFSLTYMEKEKTLHTLSLAVEQTSDWVLITDKEGNIQYANRAVEEISGYSV 504 Query: 245 PVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + + L V + L + + Sbjct: 505 RELIGDTPKIFKSGRHGKNFYKRLWEKVLAGETFRSVFINRGKDGKLFYLDQTITPIKDS 564 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQ---EAGK 350 + + + L + + A DP+T LPN + Sbjct: 565 FGNVVGFVATGKDITHEKELKEKLNYIAYYDPVTELPNRTNFIERLKFSISRTKLLNRNL 624 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D ++++ YG + ++ I + + ++E + + +L E +VL Sbjct: 625 AVLFIDVDRFKYVNDTYGYPVGDEVLKVIAQRIKDAVREGDTIARLGSDEFGVVLVDIAH 684 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + +++ + S + I + + F + + L+ + + Sbjct: 685 KEDIPKVMDKIFSNMEKPIEVEGKEVVLTLSVGIAVFPEDGTEAEDLVKKAEMALAHAKE 744 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILA 524 + E ++ T+ VL+ + AL++ + +++ QP + + G++ +L Sbjct: 745 DVRN-SYQFFREDMNTHITELVLMERHLFRALERAEFVVHYQPYFDLKSMKAVGFEALLR 803 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 D G + P KF+P++ L + +L+ + + G SVN+ P+ Sbjct: 804 WNSDDLGFVFPSKFIPILESTGLIIKVGEWLLKEACR-----LAETTGKSVSVNVSPVQF 858 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 K+ ++ R + I + LEITE + E + ++ +L K G ++AIDDFGT Sbjct: 859 KDKDFPRKVERAIEECGIEGGYITLEITESTIMDDVEFAKKSLRRLKKLGVKVAIDDFGT 918 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK L D +KID FV+DI + D IV +I LAK L VAE +E ++ Sbjct: 919 GYSSLAYLKLLPVDFLKIDVSFVRDIDRDPDDRAIVNAIIQLAKNLGLRTVAEGIENEKH 978 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 +L +G QGY + RP P + Sbjct: 979 LEILKSMGCDIGQGYHLARPMPEEE 1003 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 6/114 (5%), Positives = 22/114 (19%), Gaps = 7/114 (6%) Query: 214 AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF-----IIFTLGVGKLRYPFLNLTWA 268 + + + + GY F + + Sbjct: 17 YMVSFEDSDNPATAQVQYINSKVKDLTGYSPEEFIKDPSLWMTLVHPKDTERVMKATLKL 76 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNR 320 + + + + L + + + + R + + L Sbjct: 77 IKRKESITREYRVKTKEGSYIWVEDRLIPVLEKDRLIGFVGVARDITKRKVLED 130 >UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepID=A3JQI8_9RHOB Length = 908 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 103/657 (15%), Positives = 217/657 (33%), Gaps = 41/657 (6%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS- 171 R L + + + + LV + I + L ++++ + + L + Sbjct: 240 RAKLREPVMGKLRYLIPLVLGMIIIALLLLRWRLTPLEVQLTEEVTERKRAEASLGLRAD 299 Query: 172 -LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--- 227 L A + + R+ + + A + A +++ Sbjct: 300 ELERANAEKDKRADEMLRLTTKLTEEVVERKHAEALLRNSMASLSATTETALDAIVQMDK 359 Query: 228 ----------LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 + G + + L L + Sbjct: 360 KGKITKWSNKAEEIFGWLQAEAIGKNLGETIVPLQYREAHLSGMKHFLATGEGPVLNRRI 419 Query: 278 NQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 L E+ + +A + +R ++ + A D LT LPN Sbjct: 420 EITGLHRNGHEFPIELSIAPFKMNGEYAFSAFMRDISEAKAAEDEINKLAFYDALTGLPN 479 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 R L L +D + ++ G + R + ++ Sbjct: 480 RRMLYGKLEDEMKRSDRSGLPVVLMLLDLDFFKEVNDKLGHAQGDRLLVEAARRITACVR 539 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFD 445 E + + +L G E +++LS + + H+ + + + + + + Sbjct: 540 ETDTVARLGGDEFMIILSNMKDVTKASHIAENIIKSLAAPFYLSEKINFISGSLGVALYP 599 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ + + ++ L++ +RTAL Sbjct: 600 NDAQNADNLIVNADQAMYMAKDAGRN-GFSYFTLALQEAAQTRLSLISDLRTALPGKQFA 658 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 ++ QPI + + +L + G ++P F+P+ + L V ++ Sbjct: 659 VHYQPIVELATGKIYKAEALLRWQHPERGPVSPADFIPVAEEAGLIHEIGDWVFHEAIRE 718 Query: 563 LATHPCDK-KGPRFSVNLMPLTLLQ---------KNIAGRIIRLFKRYHISPQAVILEIT 612 LA + SVN+ P+ + + + + ++V+ EIT Sbjct: 719 LAHWRELFEPELQISVNVSPVQFRESQGSDRRSLEGFKKNWLNALNGLGLPGESVVFEIT 778 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + S + + G ++A+DDFGTGY++ LK+ D +KID FV+++ Sbjct: 779 EGVLVNAEASVTEKLIAMRDAGVQVALDDFGTGYSSLSYLKKFDIDYLKIDQSFVQNLQD 838 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +T + + +I +A L V+AE VET+ Q+ LL G Y QG+L + P + Sbjct: 839 DTDNQALCEAIIVMAHKLGLKVIAEGVETEPQRDLLVGFGCDYAQGWLYSKAVPADE 895 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 104/635 (16%), Positives = 209/635 (32%), Gaps = 30/635 (4%) Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + LV +S ++ +L F A+L + Sbjct: 4 RFPGTIRSLRSPLARAGLLSSLVPWGQALGADLSGQIQGTADVWLWPLILGGFLALLFAS 63 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYE 235 + Y + R + + ++ + + + Sbjct: 64 LGIY-NRALRRQVAQQTRALREANTTLRSERDFSQSIIQASPAFFVAIDTRHRVRMMNPA 122 Query: 236 NDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCL-LNYNQNFLQGVETEYSL 291 + + + + + + + + Sbjct: 123 MLRALDRSAREVRDRPFADLCVPADEQEALHAVFQHMLRTGHPIQHESHVVARDGERLLV 182 Query: 292 AFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 + + + + A D LT LPN L+ Sbjct: 183 EWHGNTVRNGQGQVEYFFALGLDITERRRTQAQLEHIAHYDLLTGLPNRTLLQNRISHAL 242 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 ++ + L +D + ++ G +R + L ++E + L + G E Sbjct: 243 DVARRRDRQVAILFLDLDRFKVVNDSLGHAYGDELLRQVSDRLRRRLREEDTLARWGGDE 302 Query: 401 LLLVLSGPETEGRLQHMVNILNSR---QIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLG 456 ++++ + L + + + N + +G + + + + L+ Sbjct: 303 FIVLVDEVDDPQGLSLLAEGILAELAEPYRLSNGQEVFVGGSIGISLYPQDGRSAEQLIM 362 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---N 513 + Q+ ++ ++ L ++R AL++ + L+ QP + Sbjct: 363 KADTAMYQAKDQGR-SNYQFYTSALTLAANDRLALETSLRHALEREEFTLHYQPRVRTQD 421 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKG 572 G + ++ D G+ PD F+P+ + L L VL + + T + Sbjct: 422 DVMIGMEALVRWHHPDKGLTAPDAFIPMAEETGLITPLGLWVLRTACRQAQTWMRLYGEP 481 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VNL L Q ++ +I + + + ++ LE+TE + ++ + +L Sbjct: 482 IHMAVNLSMRQLRQPDLVSQIDAILRDTGLPASSLELELTESVLMAGDGHTLTALAELKA 541 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G R+AIDDFGTGY++ LKRL D +KID FV DI + D I +I +A+ L Sbjct: 542 LGVRLAIDDFGTGYSSLAYLKRLPIDALKIDRSFVSDIPHDASDMAIASTIIAMARTLGL 601 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VVAE VET +Q A L K G QG+ P Sbjct: 602 EVVAEGVETPEQLAFLKKEGCDSYQGFGFSPPVDA 636 >UniRef50_A5IG24 Sensory box protein/GGDEF/EAL domains n=6 Tax=Legionella RepID=A5IG24_LEGPC Length = 771 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 98/575 (17%), Positives = 198/575 (34%), Gaps = 45/575 (7%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 Y R + A R + + ++ + I GY Sbjct: 196 YSFRDVTQKRMALDELRIRERAIEASTHGVVIIDVTKNENKVI---YVNRAFERITGYGE 252 Query: 245 PVFFIIFTLGVGKL---RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 L + + A+ ++ Y +A + Sbjct: 253 QHALGKGLLTLLGSNLEEVNHKRIELAIRESKEETIEMESIKRNGEFYWCEISVAPVKDS 312 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------K 350 + ++ + + + LQA D LT LPN L EQ Sbjct: 313 FGYVKHYICILNDVTQRRDMEDQLLLQATYDSLTNLPNRVLLMDRVEQAILQARKNKAIL 372 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 +F L +D + + G M +++I LL + ++ + + +L G E +++L+ + Sbjct: 373 AFLFLDLDRFKLTNDTLGHGMGDKLLQAIANRLLIVTEDFDTVARLGGDEFVILLTDIDN 432 Query: 411 EGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + I + L + + + + + L+ + Sbjct: 433 MLEAETIAQNILKIIEKPIQIDQHSLKITGSLGISFYPRDGDDYESLMKSADLSMYHAKD 492 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 E ++ + + L N +R AL +L L QP+ + G++ ++ Sbjct: 493 TGRN-NYRVYEPEMNRRVINHMQLDNALRDALKNDELFLVYQPLIDLKQSRVVGFEALMR 551 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 G+++P F+P+ + + ++ + +VNL Sbjct: 552 WHSKILGLVSPADFIPMAEENGMILEMGEWAMKQACIQVKEWHKAGFKNLSIAVNLSGRQ 611 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS----------NAESSMYNIEQLHKF 633 QKN+ + R+ K + + + + + + L Sbjct: 612 FRQKNLPEVVSRVLKSSGLQ----------SRFLELELTESLLIEDIDHVVDTMYALKDM 661 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++ IDDFGTGY++ LK+ D +KID F+ ++V+N DA I ++I +L + +L Sbjct: 662 GTKLVIDDFGTGYSSLSYLKQFPVDKLKIDRSFITEMVSNQNDAAIAKAIINLGHSLNLQ 721 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VE + Q+ + G Y QGY P Sbjct: 722 VLAEGVENEFQRDFITSHGCDYAQGYFFKAPDTPE 756 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 12/148 (8%), Positives = 28/148 (18%), Gaps = 13/148 (8%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL---LLLCTPYENDFIAGYLVP 245 + + + R A +++ + F+ + +P Sbjct: 65 LTENINLNTDEIREKNVELEKSISLLRATLESTADGIMMVNGHGAVVDWNQKFVEMWRIP 124 Query: 246 VFFIIFTLGVGKLRYPFLNLT---------WAVSTLCLLNYNQNFLQ-GVETEYSLAFIL 295 + + Y L + L Y Sbjct: 125 SYMMESGKESISFEYILEQLIDPQSLIADVQYLYQNPEWQGELPELHFKDGRIYERFSQP 184 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + S V +Y R + Sbjct: 185 QRVGSQIVGRVYSFRDVTQKRMALDELR 212 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 110/615 (17%), Positives = 216/615 (35%), Gaps = 36/615 (5%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 + + + + + + R + A Sbjct: 400 AQAMLADHPLTSMHALQAVDGRDVQIESVKTTLRDRDRRVLGILGIARDVTERQRASEQL 459 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL-- 258 ++ A A E G+ + + + Sbjct: 460 ALVNFALNHVKEAALLADENA------QFHYVNDEACRSLGWTPEELLRLKVTDIDRDLT 513 Query: 259 -RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV-LISFSVCLLYMVRIYHRSE 316 R + L + L + ++ + + + + +L +VR + Sbjct: 514 GRGQWRALWEQIKVLNSMTIEGHYKTRSGRTFPVEVSVNYFVYGGREYVLSLVRDVTERK 573 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYG 368 + + A D LT LPN R L Q + L +D + ++ G Sbjct: 574 EVEAQIRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTREYGALMILDLDRFKTLNDTQG 633 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQHMVNIL-- 421 + + + R L +++N+ + +L G E ++VL G ++ + + + Sbjct: 634 HDVGDRLLIDVARRLTASVRQNDTVCRLGGDEFVVVLEGFGSDEDQAVTQAEAIAEKVRA 693 Query: 422 -NSRQIHW--NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 ++ N + F G+ T LL Q Q+ L + Sbjct: 694 ALNQPYSLSGNGSRFHSTTSVGLTLFCGHDATADMLLKQADVALYQAKDAGRNL-VRFFN 752 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDG-GIMTP 535 + ++ + +R AL++ + +Y QP ++ G + +L G ++P Sbjct: 753 PAMQAAIDTRMAMEAALRQALERDEFHVYYQPQVDQRERVIGAEALLRWR-PQGNEAISP 811 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRI 593 +F+PL + L VL+ L + +VN+ + + + Sbjct: 812 LEFIPLAEETGLILPIGKWVLDVACAQLKAWESDPRAAHLKIAVNVSARQFHEPDFVATV 871 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 R + P + LE+TE E+ + +E+L+ G +DDFGTGY++ LK Sbjct: 872 QDSLARSGVDPTRLQLELTESVVLEKIETVVSRMEELNALGVSFCLDDFGTGYSSLSYLK 931 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 RL D +KID FV+D+V ++ DA IV++I ++++ L+V+AE VET Q+ L Sbjct: 932 RLPLDQVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIAEGVETHAQRDFLAGK-C 990 Query: 714 QYLQGYLIGRPQPLA 728 QG+L P P+ Sbjct: 991 LGYQGFLFCEPIPIE 1005 Score = 80.4 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 77/308 (25%), Gaps = 27/308 (8%) Query: 30 FISPLAIIHSSYIFLAWMPLCVML--SILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTA 87 +S ++ +A + ++ ++ F W + +L + +W ++ Sbjct: 166 LLSVAVMLAYPASLIAAASIGLVAEPTLRLRFSWSYWLFLLSLVGSATVWMIWNTWALRG 225 Query: 88 VMLG-SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 + + V A+ W+ G + W+R W + + ++ L GS Sbjct: 226 ETVANIRVDAVFSLTALGMGVATLYWQVGASPNLHWER--WSQAIVRVLPLATVVLAGSA 283 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 + + T+ L + A+L M + Sbjct: 284 VVLLGDRTDVSATSRTAVTIASLTVIVLAMLRQGM-----------LLREHAQLKIVTRN 332 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFI---IFTLGVGKL 258 E++ + V L + G +G Sbjct: 333 LEESERQKNLILHTLPDLVWLKDADGVYQMCNPAFERFTGRTEAEMRGKTDFDIVGPELA 392 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRS 315 R A+ L + + + L +L + R Sbjct: 393 RKFRNEDAQAMLADHPLTSMHALQAVDGRDVQIESVKTTLRDRDRRVLGILGIARDVTER 452 Query: 316 EWLNRRWH 323 + + + Sbjct: 453 QRASEQLA 460 >UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5S7_9DELT Length = 857 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 102/576 (17%), Positives = 190/576 (32%), Gaps = 33/576 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIA 240 L R + EK+ T+ A + L I Sbjct: 271 LLRANTQLKIEIAERKVIGDALRKAEKKYRTIFENALEGIYQTSPSGRFLSANPSLARIL 330 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-----LQGVETEYSLAFIL 295 G+ + +G Y L + ++ Sbjct: 331 GFKSADEMMGSVYDIGTQMYLEPGRRKEFLRLIEETGEVKNFVSKVRRRDGRIIWISENA 390 Query: 296 AVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------- 345 + C V + + QA DPLT LPN Sbjct: 391 RRITDADGSVMCYEGSVEDITLRKKAEDQLKRQAFHDPLTGLPNRALFLDHLRMAMERGR 450 Query: 346 -QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + + +D + ++ G +RS+ R L + + + + G E ++ Sbjct: 451 RRRHLFAVIYMDLDRFKVINDSLGHETGDELLRSVARVLEKCGRSVDTIARFGGDEFAIL 510 Query: 405 LSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + + + + N + + + LL Sbjct: 511 IEEISASRDAIAIARRILDGVRQPFTINGNEVFTSASLGIVLKTDGYDRPEALLRDADTA 570 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEG 518 ++ H + + Q + + L +R A+D + + QPI G Sbjct: 571 MYRAKEHGKSR-FKVFNQKMHDQALRLMALETDLRRAVDLREFEVAYQPIVCLDTRRVCG 629 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-----DKKGP 573 ++ ++ + G++ P F+ L L D VL + + + Sbjct: 630 FEALVRWRHPEHGVILPGDFISLAEDTGLIYAIDNFVLVAACAQVKLWQTTFGHLMGELL 689 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 ++N+ Q + ++ R ++PQA+ +EITE N + ++QL Sbjct: 690 TLNINISGKHFGQPMLLSQVTRALDDSGLNPQALNIEITESALMDNPAVAEEVLKQLKSL 749 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++ IDDFGTGY++ L+R D++K+D F+ + N IVR++ L ++ L Sbjct: 750 GAKVCIDDFGTGYSSLSYLQRFPIDVVKVDRSFIDGVEGNLDSQAIVRTVFSLGESLGLK 809 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +VAE VET Q A L G +Y+QG+L RP + Sbjct: 810 IVAEGVETPAQLAFLENEGCRYVQGFLFYRPLSATE 845 >UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0VL09_ALCBS Length = 959 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 114/581 (19%), Positives = 214/581 (36%), Gaps = 32/581 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL----- 229 ++ RMI + + L T+ A + +L Sbjct: 369 GRVVSRSESGRAIRMIGTRRDITEDRQAQEQQRLAA-----TVFENAPEGIFILDHKFRF 423 Query: 230 LCTPYENDFIAGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L + I GY + G R +L +T A+ N + Sbjct: 424 LAVNTRFEQITGYTESLLIGRRILEEEGAQANREIYLEITAALLDNGFWEGEINERRRNG 483 Query: 287 TEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y ++ + + + M+ + ++ + D LT L N + Sbjct: 484 EIYPEWLQMSAVRDEQKRVIRYVGMMSDLTARKETEQQLQFLSNYDRLTGLANRTQFREH 543 Query: 344 PE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + +D + ++ G + +++ + E L + Sbjct: 544 LHKSLTLARLNRQKVALLMIDLDRFKPINESLGHEIGDRLLKAAAERMAQHAGGQESLAR 603 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 + G E L+L +EG + L + + + L +G F + Q Sbjct: 604 VGGDEFTLLLENHGSEGSISQQCQQLINAMKKPFLIDGHELLLGASIGISIFPDTAKEAQ 663 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 ++ Q Q+ + + +Q+ L ++R A+ + + +++ QP Sbjct: 664 SMINQSDMAVYQAKRSGGN-NFQFYRSNMRVASVEQLALETSLRKAIFKNEFVVHYQPKM 722 Query: 513 NK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N + ++ G++ P F+PL + L + VLE + Sbjct: 723 NLASNRITSVEALVRWQHPTMGLLPPADFIPLAEETGLISAIGELVLERSCRQAHKWQKQ 782 Query: 570 KK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 SVNL + N+A I R+ +SP + LE+TE + E ++ ++ Sbjct: 783 GLGEICVSVNLSAHQFRKGNVAETIDRVLSTTELSPHLLELELTESLIMEDMEQNIELLQ 842 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 QL G +A+DDFGTGY++ LKR D +KID F+ ++ N DA I R+I D+A Sbjct: 843 QLRSRGVELALDDFGTGYSSLSYLKRFPVDTLKIDRSFIMELDKNPDDAAITRAIIDMAH 902 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + ++V+AE VET ++L + +QGYLI RP P ++ Sbjct: 903 SLKMNVIAEGVETADHLSILRDMHCDSIQGYLISRPVPESE 943 Score = 76.5 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 26/318 (8%), Positives = 73/318 (22%), Gaps = 18/318 (5%) Query: 23 VLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLS 82 + ++ ++ + + + PL + S + ++ + G+ T L + Sbjct: 90 LFRRMLSALALASPLLIGLAGYLFNPLDSLFSPPMLGAQLVLICLGLGLSTTALVAYSSH 149 Query: 83 FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYL 142 F + L + + + ++ ++ + + + Sbjct: 150 FPTVFLYLIMLLGPAVARLSETQQHSQLALVLLMSLLGLFFLVAARRINHTGHKAMMLQA 209 Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 L + +A ++ A L M+ A Sbjct: 210 NNRSLIDYLNRARSDAEALNEKLAQEIYDRKDARQRLQDTNDRLESMVQERTRA---LGE 266 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTP----YENDFIAGYLVPVFFIIFTLGVGKL 258 +R + + + +L T D + GY F F + Sbjct: 267 TNTALAATSERLELALEASNIGLWDWMLDTGLNHHTNFDRLLGYDSAYFKNFFGDLDTLV 326 Query: 259 RYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAVL----ISFSVCLLYM 308 L + + + V+ ++ ++ Sbjct: 327 HPDDLARIRQAMVSHFKGEDPRYHAVYRLRHADGSWRWIEDEGRVVSRSESGRAIRMIGT 386 Query: 309 VRIYHRSEWLNRRWHLQA 326 R + A Sbjct: 387 RRDITEDRQAQEQ-QRLA 403 >UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JTT5_BURVG Length = 884 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 112/631 (17%), Positives = 222/631 (35%), Gaps = 30/631 (4%) Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY 185 + I L+ ++T G + +LI + Sbjct: 249 VSGFVTATSSIDGVNRLMAYERVVGYPLATITGMNEQEIRARWQADAVRFILIAYLSLAV 308 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIA 240 + ++V H R A E+R + +V + + + Sbjct: 309 VVLLLVIIHRQLRQLARRTAAIEESERRFDRVLQELTDAVYVRDRDGRIVVANRKFGLLF 368 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFI 294 G ++ V L + + V S ++ + + Sbjct: 369 G-AEDTRSLVGKNIVELLAHTTKQMVAEVNNRVLNSHGAPMSLEIETTTHS-AVLPIEYT 426 Query: 295 LAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + S +L +R + QA D +T LPN R Sbjct: 427 FSAVDISGQSHVLCQMRDVTTRRQYEAQLVKQATFDEITGLPNRRLYIDRLSNALHRSKR 486 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 G + + +D+ + ++ G + + + L L++ + + + G E +L++ Sbjct: 487 DGTGCAVMFIDLDHFKRVNDTLGHPFGDQLLIAAAQRLSGLLRPGDTVARFGGDEFVLLM 546 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 S + + + + + +G F G+ LL Sbjct: 547 SDFTDPMECRIVAEGIVEAFAAPFEVAARSISVGASVGVSVFPGDGTEPDILLQHADTAM 606 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 ++ + ++ + + + IR+AL + ++ + QPI + +E Sbjct: 607 YEAKSAGR-SGFCFFNHDMNARVHDMLRIDARIRSALARNEISVLYQPIIDPVTREIVKA 665 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVN 578 + + D G + PDKF+P+ + L A+ VL+ A + SVN Sbjct: 666 EALARWHSEDLGHVPPDKFIPVAEENGLIAQIGDWVLQEACMNAAKWSKELASPITVSVN 725 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + + + + LEITE S+ E+++ I L + G ++ Sbjct: 726 VSAKQFDDPTFVDSVFAALETSKLPAHLLELEITERVLISDDETALETISALREIGVGLS 785 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L + + IKID FV+D+ + + R+I +AK+ L ++AE Sbjct: 786 LDDFGTGYSSLSYLTKFPLNTIKIDRAFVRDLDHDEQTQNLTRAIIAMAKSLDLKLIAEG 845 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VETQ+Q L G +YLQG+ GRP ++ Sbjct: 846 VETQEQADKLVLYGCEYLQGFYFGRPMTSSE 876 >UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVS6_9PROT Length = 829 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 102/565 (18%), Positives = 188/565 (33%), Gaps = 33/565 (5%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND-----FIAGYLVPVFFII 250 + E+R + A + L + + GY Sbjct: 254 DVTERGKAERALRESEERYALAAAGANDGLWDWNLGSNRIFFSDRWKQMLGYATDEIEDG 313 Query: 251 FTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV- 303 ++ + A T +T + + Sbjct: 314 AEEWFSRIHPEDVQRVTAQIDAHLNGTATNFESEHRVRHFDDTYRWMLVRGLAVRDGENN 373 Query: 304 --CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSF 352 + + + + AL D LT L N + Q + Sbjct: 374 AYRIAGSMTDVTERKRAEEQAIHDALHDSLTGLANRTLFLERVRQALARQRRSLSAQFAV 433 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D + ++ G + I + R L ++ + + +L G E ++L + Sbjct: 434 IYLDLDRFKVVNESLGHVHGDDLIIAAARRLEQNLKFGDTVARLGGDEFAIMLEDVHDKE 493 Query: 413 R---LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 L M+ S + N + +L ++ Sbjct: 494 EGTALSEMLQKALSTPFVLGGKEVFTTASMGIAHSTDNYVRPEDILRDSELAMYRAKELG 553 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 ++ + + G T + + +R ALD+ +++L QPI + G++ + Sbjct: 554 KARSVA-FDPAMRGTTVTPLDVETDLRRALDRNEMILNFQPIVSLADGRIRGFEALSRWR 612 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLT 583 + G + P +F+P+ + + VL + + + SVNL Sbjct: 613 HKERGDIPPSEFIPIAEETGMIVELGQWVLRNACAQMVEWNKEFPDQGPFEISVNLSGRQ 672 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q ++ + + + LEITE NA+ S + L ++ +DDFG Sbjct: 673 FTQLDLVKMVTNSLDGTGLDASFLKLEITESALMENAQRSAQMLRHLKDLHIKVCVDDFG 732 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L + D +KID FV+D+ N + IVR+I LA+ L V+AE VET + Sbjct: 733 TGYSSLSYLHKFPIDTLKIDKSFVQDMGRNRHNLEIVRTIAVLAQNLRLDVIAEGVETPE 792 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q A L +G Y QG+L RP Sbjct: 793 QLAQLRAIGCGYAQGFLFSRPLTAD 817 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 102/495 (20%), Positives = 197/495 (39%), Gaps = 34/495 (6%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---------FSVCLLYMVRIYH---- 313 + L + N F + + ++ +A + L + + Sbjct: 86 KRAAELAIANQELTFQNKEKAKRAVELAIANKELAFQSKEKAKRAAELAIVNQDLTFQSK 145 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 L + A D LT LPN R L Q + + +D+ + ++ Sbjct: 146 EKAKLAEELNDLAFYDTLTGLPNRRLLIDRLHHALASNVRQGCESAVMFIDLDHFKDIND 205 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMVNI 420 G + + + L +++ + + +L G E +L+L + + + + + Sbjct: 206 TLGHEVGDLLLIQTAQRLESCLRKGDTVARLGGDEFMLILENLDENPIEAATKAKAIADK 265 Query: 421 LNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + FD T + L+ Q Q+ L + Sbjct: 266 ILAELNKPYQLDMHKCHSTVSIGAVFFDHQGNTAEDLIKQADIAMYQAKQAGGNL-IRFF 324 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTP 535 + ++ L N +R A+++ LY Q + G + ++ + G++ P Sbjct: 325 NPKMQESINARITLENELRIAIEKSQFHLYYQIQMDSDNRVLGAEALIRWTNPEHGLVLP 384 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRI 593 F+P+ + L V+E+ + + +VN+ QK+ ++ Sbjct: 385 ATFIPIAEETGLILSIGKWVIETACAQIKVWQKKSQTRDLTLAVNVSAKQFRQKDFVDQV 444 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 +R+ I + LE+TE + E ++ ++ L+K G + ++DDFGTGY++ + LK Sbjct: 445 QSAVQRHAIPGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSSLQYLK 504 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 RL D KID FV+DI T+ D IV++I +A+ + V+AE VET++QQ LL G Sbjct: 505 RLPLDQFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLLLGKGC 564 Query: 714 QYLQGYLIGRPQPLA 728 QGYL +P P+ Sbjct: 565 TLYQGYLFSKPIPID 579 >UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J4K1_COMTE Length = 822 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 107/639 (16%), Positives = 220/639 (34%), Gaps = 24/639 (3%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 +G+ + + L + + +L G + + D + + Sbjct: 173 WFGIPAERMRGMRLQEVLGNHVYAEIEAHLAGLADGRAVSFDLEYMRQDGDMLFGQVSLV 232 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALS-----VL 226 L + A+ + + A Sbjct: 233 CRDQSGLQAGLLMLVTDVTDRKLAETSLHNEKERLRITLNSIGDAVIATDAEGRVNFLNP 292 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + T + G + + G + + L + + N Sbjct: 293 IAEAMTGWYGRRAIGVPIEQVMPLRDSFDGHVLQNPIYLALKEQRIVGMALNSQIACRDG 352 Query: 287 TEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + A + + + + + + + A DPLT LPN L+ Sbjct: 353 RVLEVEDSAAPIWDQAGKLTGAIIVFHDVSEARAMALKMTHLAHHDPLTNLPNRMLLQDR 412 Query: 344 ----P----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + L +D+ + ++ G + + + + L ++ + + + Sbjct: 413 TSQALQQAGRNGGQVALFILDLDHFKTINDSVGHSIGDQLLLQLAKRLQQFVRNGDTISR 472 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 G E ++++ + + L + + D+ + + + + Sbjct: 473 QGGDEFIILIPEIRHVDEVSQLGERLLEACAEPFLLDGVRYDLSMSIGISLYPDDADNQE 532 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L Q+ + + + +L +R A+ +GD ++ QP Sbjct: 533 ALYRHADAAMYQAKQEGRGR-FRFFSQEIEHTLYARHMLERHMRVAVAEGDFEVHYQPKI 591 Query: 513 NK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + + G + ++ + DG +++P +F+PL + L VL + Sbjct: 592 DLASQQVVGAEALVRWRRQDGSLISPAQFIPLAEETGLIVPLGRSVLLKACQEGRRWHEQ 651 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ + L + N + + ++ I P + LEITE + +++ I + Sbjct: 652 GYLIHIAVNVSAVQLAKSNFTAMVSEIIEQTGIMPGYLELEITEGVLAKDVKNTFAIINE 711 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 LHK G I+IDDFGTGY++ LK+ D++KID F ++I+T A IV +I ++A Sbjct: 712 LHKIGVSISIDDFGTGYSSLSYLKQFPIDVLKIDQSFTREILTEKSSAAIVAAIINMAHG 771 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L +VAE VETQ Q LL ++G +QGYL RP Sbjct: 772 LDLRLVAEGVETQAQAELLQQMGCTVMQGYLYSRPLMPE 810 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 125/761 (16%), Positives = 236/761 (31%), Gaps = 55/761 (7%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAW---MPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 L L + + I +AW + L + ++ Sbjct: 153 MAFGYPLRAADGTLRAVIFATITVAWFDRLIEGFRLPEGWEASVISNSGLVLA-HQPERA 211 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLG-----TRWRYGLTSRYVWQRLFWLGLVT 132 + ++ V+ + G + G+ F +G Sbjct: 212 PEGWRAHKVPATTLARMAAVVRDEGGIAELAGIDGVQRLYGIGVPDFAPGSGFFAIGAPL 271 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV- 191 ++ + + + I+ ++ + T V R Sbjct: 272 ERSLEAAGQRLLMYLALVAAIALASALIARLYIYRLIEVWATRVRGAIAEIAAGRRDARI 331 Query: 192 ----------SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEN 236 + +I G+ +R + + S+++ +L Sbjct: 332 GQATGVAELDALSEGIDQMALEIGKREGELQRLSMVIEQSPESIVITDTAGCILYVNEAF 391 Query: 237 DFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 I GY G R + + + + + ++ + Y Sbjct: 392 QRITGYARDEVLGRNPRILNGGLTPRATYEQMWATLLAGEVWRGEFHNVRKDGSAYLELA 451 Query: 294 ILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK 350 +A + + + + + H A D LT LPN L Q Sbjct: 452 TIAPIKDAGGTVTHYVAVKEDITQRKQSEALLHRLAYFDALTGLPNRALLHDRIAQAIRS 511 Query: 351 SF--------CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + ID ++ G + + L ++E + + + + Sbjct: 512 GVRRESFGMLMLVDIDRFRQLNDTLGHAAGDRLLCEVAARLRASVREEDTVARHGDDDFA 571 Query: 403 LVLSGPETEGR-----LQHMVNIL---NSRQIHWNNTG---LDMGYGAAWGRFDGNQETL 451 +++ +H+ L + T F +L Sbjct: 572 VLVERIGETEADALSHAEHVARKLQRALQQPYVLGGTEGDRHFATLSFGISLFHDGVSSL 631 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL Q ++ + + L + AL+ L+ QP Sbjct: 632 ESLLKQAEVALYRAKQDGRD-IVRFFNPEMQAVVDAHARLEARMHEALEANAFRLFFQPQ 690 Query: 512 RNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-- 567 N+ G + +L G +++P +F+PL R L VL S LA Sbjct: 691 VNRRGVVIGAEALLRWPLDGGAMVSPAEFIPLAEDTGHIVRLGLWVLRSACAQLARWQMN 750 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + + +VN+ Q + + + I P + LE+TE S+ + ++ + Sbjct: 751 EGTRHLKIAVNVSARQFHQPDFVASVKDSVRAAAIDPCRLELELTESAILSDVDETIRRM 810 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G R A+DDFGTGY++ LKRL D +KID FV+D+ + IV +I L+ Sbjct: 811 NELRALGIRFALDDFGTGYSSLSYLKRLPFDQLKIDQSFVRDMAEDESSEAIVLAILSLS 870 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A L VVAE VE +Q+ L + G QGYL G+P P+ Sbjct: 871 HALGLEVVAEGVEMPEQRDFLRQHGCDSFQGYLFGKPLPME 911 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 123/629 (19%), Positives = 218/629 (34%), Gaps = 35/629 (5%) Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 S L+ S L+ + R++ Sbjct: 468 ASDVLSAELLQSLHPHMLQALQGRPVVFDYRSPYRGAGPEFFHTTIIPETGPDGRVVAIM 527 Query: 194 HFAQ--ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPV 246 FA + + R +L V L + G Sbjct: 528 VFAVDVTEQKHLALELSQQRSRLASLVNAIPDVVFLKDAAGRYLSCNPVFERYLGRRERD 587 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLN----YNQNFLQGVETEYSLAFILAVLISFS 302 + + + I + Sbjct: 588 IVGLGDEELMTPVEAARVRQLDERAMAAWQPLVYEETLTFAEDGYAGYFETIKTPIRDMH 647 Query: 303 VCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKS 351 + L + R + ++ L A D LT LPN R L E + Sbjct: 648 GHVTGLLSVSRDITDRKKAEQQIELLAFFDALTGLPNRRLLLDRLQRAGAACQRNEKLGA 707 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G M + + + L ++ ++ + + G E +++L G + + Sbjct: 708 LLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFVVMLEGLDAD 767 Query: 412 G-----RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + L ++ F + T+ LL + Sbjct: 768 TALAALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTVDELLKRADLAMY 827 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDE 521 Q+ A + + Q T + L + +R + + +L ++ QPI + G + Sbjct: 828 QAKAAGRNTQ-RFFDPDMQAQVTARSQLESDLRQGIARHELTVHLQPIVDGSTRLCGAEA 886 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNL 579 ++ G+++P F+PL + L QVL++ + L +VN+ Sbjct: 887 LVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNV 946 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q + ++ +PQ + LE+TE + E ++ + QL + G A+ Sbjct: 947 SARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFAL 1006 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL D++KID FV+D++T+ DA IVR+I LAK+ L VVAE V Sbjct: 1007 DDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGV 1066 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET Q + L G + QGYL GRP PL Sbjct: 1067 ETAGQLSFLKLHGCEGFQGYLFGRPVPLE 1095 Score = 71.1 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 31/361 (8%), Positives = 65/361 (18%), Gaps = 58/361 (16%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFI------------------- 58 F V ++ +S + L L+ + Sbjct: 56 FLDMVAVLIGVLAVSVSLHMLDESAQGRANILVAGLATAAVCNFLHGVLPHQPLGTGQDA 115 Query: 59 --FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 R G+ L F L + L + AI R L Sbjct: 116 QVAVSRYFSLWGHGVESVTLLLFALRASAAGPGMAWALVSALASLAIAWTATTDVPRDWL 175 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLK------------------ISTFFG 158 + + + + G + F Sbjct: 176 VAAGHAPLRIAALVSGTLMALSACLFYGMRQRRTDASVKRHGRRRTMAAAAVSMAAAQFL 235 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 A L A+ + + I R + E R L Sbjct: 236 MAVPPERFYWARMLAHALHVAGYALLFQAVFIAGIRMPYARLREAESRLRESESRLQLLG 295 Query: 219 WLAALSV---LLLLLCTPYEN-------DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 SV ++ + + G ++ Sbjct: 296 RNLPDSVPYQMVREPDGRRRFVHMGEALERLVGVSAADVMEDAQRLFDRIDPEDRAAQAE 355 Query: 269 V-----STLCLLNYNQNFLQGVETEYSLAFILAV--LISFSVCLL--YMVRIYHRSEWLN 319 T+ + + + + L S ++ ++ + Sbjct: 356 ADEVSYRTMGVGESVVRMRRMDGAPRWIRLSSSPRLLQGGSGRVIWDGVLTDVTQQREAQ 415 Query: 320 R 320 Sbjct: 416 D 416 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 97/447 (21%), Positives = 179/447 (40%), Gaps = 16/447 (3%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 L + + +RI + + QA DPLT LPN L Sbjct: 182 LANNLAHGILSLRIMAEHKRYEEQLAYQATHDPLTALPNRNLLADRISQALAWAQRHRRW 241 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D +F++ G ++ + L +++ + L G + ++VL+ Sbjct: 242 IAVLFVDLDFFKFVNDSLGHGKGDQLLKMVAERLSERVRQVDTLAHQGGDKFVVVLTDLR 301 Query: 410 TEGRLQH---MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 ++ S + L + + + E Q L+ ++ Sbjct: 302 GNEEADRAVHVIREAISLPFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVAMYRAK 361 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 ++ + ++ + +R AL+ + L+ QP + G + ++ Sbjct: 362 EQGRN-CFRYYTRELNERVASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLI 420 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPL 582 + G++ P F+PL + L + V+ + +VNL P Sbjct: 421 RWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPR 480 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + + G I + + + P+ + LEI E + ES+ + +L G ++++DDF Sbjct: 481 QFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDF 540 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR +KID FV+DI+T+ A I +SI +A +LSVVAE VET+ Sbjct: 541 GTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETE 600 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L G +QGY + RP P A+ Sbjct: 601 GQLEFLRAHGCNEIQGYYLSRPLPAAE 627 >UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLU9_AZOVD Length = 834 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 122/809 (15%), Positives = 257/809 (31%), Gaps = 86/809 (10%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV 64 + + ++ L L + F++ ++ ++ I ++ + V + G R + Sbjct: 15 SGMSLLLAVWGLICLFGGSLPPVKYFLTLHQMVETASIVVSVLIFAVGWHTFRMHGNRVI 74 Query: 65 VPVLCGMFCTNLWNFHLSFL-------------------QTAVMLGSQTFVVLCACAILR 105 + V C + +F + V++ AC R Sbjct: 75 LMVSCTFLGVAISDFSHMLSYSGMPDFLGPNSPEKAIGFWLLARCLTALGVLIIACLPWR 134 Query: 106 WQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY------------------------ 141 ++ R + L L + I + ++ Sbjct: 135 LEVSGRS-AAIDPDRWRVLLVTLCAMVSIHLVLLLFPEILPRTYQEGVGLTEFKRGVEFS 193 Query: 142 ---LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML---------FYYLTRM 189 + + + + LL + + + F ++ ++ Sbjct: 194 IIAIHAASIVLLSVRRRRDMGLEKGLLICSLLVMMMGEFFFTIYSDVTDAYNIFGHIYKI 253 Query: 190 IVSPHFAQILWRRDIAP----SLGKEKRAFTLSWLAALSVLLLLLC-------TPYENDF 238 I + ++ I + L +L L P + Sbjct: 254 IAYLVLYRAIFVESILAPYKFLEDSRQHVEVLMGALPDIILEARLDGLLLSAHVPTDGKL 313 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + A + + E ++L Sbjct: 314 FGEKKPKAGDYLQDRLPSQAMDCLTGAMRAAESGGQGTGLRFRTGKGAEELVFDVSASLL 373 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 S + ++R + A D LT LPN + Q Sbjct: 374 AQRSDRSSHFVILIRDVTEQARNQSKIEQMAHFDALTGLPNRTLFNTCFDVEATRCEKQR 433 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS- 406 + + +DN + ++ G + + + L +++ + + + G E + +L Sbjct: 434 QPLALIFMDLDNFKNVNDSLGHKVGDALLVELAARLEKVLRPRDMVSRQGGDEFMFLLPE 493 Query: 407 -GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 T ++ + I L + F + L+ L ++ Sbjct: 494 ADVRTAEQMTECIKRSVEVPIQVGQYTLHVSASMGICMFPQDGRDLETLSSHADIAMYRA 553 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 E + + +LL +R A+ G L +Y QP + ++ EG + + Sbjct: 554 KQE-RRSHYAFFSEEMQACAARSLLLEGALREAVQWGQLDVYYQPQFDITGRKLEGAEAL 612 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLM 580 + + G ++P +F+P+ + VL + + +VN+ Sbjct: 613 VRWRHPELGFISPAEFIPIAEITGQIIKIGDLVLRRATQQMRHWLDAGLPGDMSIAVNIS 672 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + +I + P A+ LE+TE A + E + + L G +++ID Sbjct: 673 MAQFRDTALLEKIDTALAESQLPPWALELELTESVAMDDPEQVVDIVRSLRSRGVKLSID 732 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK+L+ +KID F++ I + D IV++I LAK + +AE +E Sbjct: 733 DFGTGYSSLSYLKKLRVHKLKIDRSFIQAISSAGSDRSIVQAIIGLAKDLDMQTIAEGIE 792 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T++Q+ LL LG QGYL +P P ++ Sbjct: 793 TEEQRQLLEALGCDSGQGYLFCKPLPASE 821 >UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=Bradyrhizobiaceae RepID=Q20XI9_RHOPB Length = 915 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 108/615 (17%), Positives = 203/615 (33%), Gaps = 35/615 (5%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + + DFPL + + ++ V + + ++ + Sbjct: 285 LVASHALTDFPLLMVVTTTVSSSLADWYRQTRFLIIVAAGSTMIIAAILFLIIRQLTRQH 344 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTL- 253 R ++R T +LL + G V +L Sbjct: 345 -RATQRQLTRDKQRLSTAINNMTQGLLLFDSSARLVVCNQRYMEMYGLSAEVVKPGCSLR 403 Query: 254 -------GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 G + + +A A + Sbjct: 404 QILAERKAAGSFEGDIDAYCADTLSHVAARNVTVAVTPDGRSIQIATEPAP----EGGWV 459 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------QEAGKSFCCLRIDN 359 R A D LT LPN + + E + + + ID Sbjct: 460 ATHEDITDRRRSEERIAYLAHYDELTSLPNRTSFRERIEDEFERVARGGTLALLYIDIDE 519 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ + L ++E + + +L G E ++ + P + +V Sbjct: 520 FKAINDSLGHPVGDALLKIVAARLKACLRETDFVARLGGDEFAILQTAPRDVQEVTELVA 579 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + + L+ Q+ A Sbjct: 580 RLFETIRAPCECLGHQISTDASIGIALAPPHGTDTDQLIKNADLAMYQAKADGR-RTCRF 638 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 E + ++ L +R A+ +Y QPI N + G + +L G++ Sbjct: 639 FEPRMEASAKERRTLELELRKAIADCAFEIYYQPIVELRNGDVIGCEALLRWRHPQRGMI 698 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 +P KF+P+ L VL + A P + +VN+ P+ + + ++ Sbjct: 699 SPAKFIPVAEATGLINELGEWVLRTACAEAANWPAE---MSVAVNVSPVQFKSRTLPLKV 755 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + LEITE + E+++ + +L G RIA+DDFGTGY++ L+ Sbjct: 756 AAALAASGLPASRLELEITEAVLIDDDETALSVLHELKTLGVRIALDDFGTGYSSLSYLQ 815 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D IKID F+ I + IV+++ ++A A+ ++ AE VET +Q+ LL LG Sbjct: 816 RFPFDKIKIDRCFIDGIARPDGASAIVQAVVNIATARHMTTTAEGVETAEQRDLLRGLGC 875 Query: 714 QYLQGYLIGRPQPLA 728 ++QGYL Sbjct: 876 THMQGYLFSPAIAPD 890 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 105/601 (17%), Positives = 204/601 (33%), Gaps = 42/601 (6%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 + + LL+L L+ F+ L E++ + Sbjct: 128 VSRSLQPVLIKTLLALIGGALVGAYAFFRL------RTVPLRALDEAYRVLKQSEEKYRS 181 Query: 217 LSWLAALSVLLLLL-------------CTPYENDFIAGYLVPVFFI-IFTLGVGKLRYPF 262 + + L + G+ I L G Sbjct: 182 VYESLNEGLALYRASRREDGSADLVLTDVNPAAINVFGFSRDDIGGWITELLDGLFAECA 241 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRW 322 + A+ ++ + + L + ++ + + Sbjct: 242 EQVFGALQARGEVSLDLE-QNSTGRIF----SLTAFPMGYGMVATLLEDVTEKKRTAEQL 296 Query: 323 HLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT L N R L EQ + + ++ + ++ G Sbjct: 297 ERLAYYDSLTGLLNRRMLLDRMEQAIGTAQREGVKVATLFMDLNGFKVINDTLGHKAGDQ 356 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNT 431 + + + L ++++ + L +L G E ++ + E + + L + + Sbjct: 357 ILVEVAKRLQKMVRKRDTLARLGGDEFVVAAT-FEKDENASAIAKNLINAITPVYQVCDR 415 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + +G F + + + LL + + ++ + +++ L Sbjct: 416 EVYVGVSVGISIFPDDGDVPETLLKNADIAMYNAKSQGQG-GFCFYSAQLNERLHERMQL 474 Query: 492 LNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +R A+++ + L QPI + + +L + G + PD F+PL + Sbjct: 475 EFKLRGAVEREEFFLEYQPILDSKTGRITAVEALLRWNDPEKGRVMPDSFIPLAEDTGVI 534 Query: 549 ARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 VL + L R +VN+ Q +++ + + + P + Sbjct: 535 LPLGEWVLRTACAKLRQWQDAGVMPVRMAVNISGRQFTQGDLSKTVEDALLQSGVHPSWL 594 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LE+TE N E ++ + +L I+IDDFGTGY++ + LK D +KID F+ Sbjct: 595 ELELTETCLIKNVEETVRKLCRLKGLCVSISIDDFGTGYSSLQYLKNFPIDHLKIDRGFI 654 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++ D IV +I +AKA L V+AE VET+QQ L + G QGY RP P Sbjct: 655 NNVCELPDDRAIVDAIIGIAKAMDLHVIAEGVETRQQAEHLMRRGCDEFQGYYFYRPLPE 714 Query: 728 A 728 Sbjct: 715 E 715 >UniRef50_B6R9S7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R9S7_9RHOB Length = 728 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 105/626 (16%), Positives = 210/626 (33%), Gaps = 47/626 (7%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA-- 205 + I+ F + I + + F + + F R +++ Q +R Sbjct: 78 VPIVVITVFTDRSFRIRALEAGATDFLQSPVDHNEFVSRARNLLALREEQNAVKRHARFL 137 Query: 206 -------------PSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVF 247 ++ + + Sbjct: 138 EQELVNVEQQSKEALRDSREQLAQVIDSVPAMITTSTRDGLCAFSNAAWARFLNSTTAEL 197 Query: 248 FIIFT------LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 T + R + L Q + + L+ Sbjct: 198 VGEDTYGKFDKFTRERNRRLDRKVFITGRALPPYEIEQRNHA--GDIFHFIVTKSPLLDA 255 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 ++ + A D LT LPN L + ++ Sbjct: 256 EGNTTHVVTTATNISDRKRAEAHLLHIAHHDALTGLPNRTMLGERIDEEIFQCRNSGRSF 315 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G + + LL + ++ + +L G E ++ + ++ Sbjct: 316 ALHFIDLDRFKSINDALGHRTGDRLLEVLAERLLRCVDGSDLVARLGGDEFAILQTDLKS 375 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 L S H + L ++ + + LL QS A Sbjct: 376 SEEAMRFAQHLVSVVEEPFHISGKELQTSASVGITKYPEDGLNSEELLRCADMAMYQSKA 435 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILA 524 + + V L +R A++ L L+ QP + G + +L Sbjct: 436 DGGN-TFHLFSTKMDHHVKETVALEAELRNAIEHDQLELFYQPQIDLRTNEIVGAEALLR 494 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 + D G++ P+ FL + L V+ + + PR +VN+ P Sbjct: 495 WNRPDYGVVAPNVFLGTAEEVGLILPIGEWVIFAACQQAKKWMDMGLETPRIAVNISPTQ 554 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 ++N+ + + + +EITE +++++ ++ ++ + G I+IDDFG Sbjct: 555 FRKQNVPQLLKDALVSCSLPADKLEIEITENIVLHGSDATVRDLREIREMGIAISIDDFG 614 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L R D +KID F +D++T+ + +I+++I L K+ LS++AE VET++ Sbjct: 615 TGYSSLAYLSRYSVDCLKIDRCFTRDMMTDPNNTVIIKAIVGLGKSLDLSIIAEGVETRE 674 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L G + QGYL G+P P D Sbjct: 675 QAEYLKDAGCEMAQGYLFGKPVPAED 700 >UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protein n=4 Tax=Legionella pneumophila RepID=Q5ZZI1_LEGPH Length = 985 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 87/580 (15%), Positives = 201/580 (34%), Gaps = 28/580 (4%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 + L L + R I ++ R+ + Sbjct: 404 VRLAVFNATGEKLVLAIVRDITLQKRSEATIRKLTRALEQSPVLVIITDKT------GTI 457 Query: 230 LCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + GY + + ++ + Sbjct: 458 EYVNAKVIEQTGYRKEELVGGNTRILRSGQTPHEIYKTMWEHLANGEEWHGELLNKNKSG 517 Query: 287 TEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + ++ I++ + + L ++ + + QA D LT LPN Sbjct: 518 EHFWVSAIISPIRNDNEEITHYLAVMEDVTQKKSYEEMLKHQATFDNLTNLPNRLYAVNK 577 Query: 344 PEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 E+ + L +D + ++ G + ++++ L ++++ + + + Sbjct: 578 LERAISKSHINNQKLAVLFLDLDEFKQINDSLGHAIGDLLLKALSERFLSMIRQTDTIAR 637 Query: 396 LPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E +++L + + + + S+ + L + + + + + Sbjct: 638 LGGDEFMMILENIMQDKDAESIAKKCREICSQPFVIESQELLVSTSIGIAIYPEHGKDAK 697 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ QS + + + + + A + +L + QPI Sbjct: 698 TLMRNADTAMYQSKIRGKN-NWTVFQNTMIEGANNHIRIKTELHQAFTRNELYICYQPII 756 Query: 513 NKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-C 568 + + +L G + PD+ +PL + + +L+ + Sbjct: 757 ELKENKVVAAEALLRWQNTTLGQINPDQIIPLAEETGMIIPLGYWILDKVCTQAKEWEFI 816 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + +VN+ L L QK+ ++ + KR +S ++I E+TE +++ + + Sbjct: 817 TGSKIKVAVNISTLQLKQKDFIHKVQLILKRTKLSADSLIFEVTESAFIDDSKFILSQLN 876 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +L G ++DDFG GY+ + +K +KID VF++ + TN + ++ SI +A+ Sbjct: 877 KLSDMGIHFSLDDFGVGYSFLQYIKSYPFKNLKIDRVFIQGVNTNHNELSLINSIITMAR 936 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LSV+AE +ET +Q L+ + +QG+ +P Sbjct: 937 NLKLSVIAEGIETAEQLELMRSMNCDMVQGWYFSKPLSGD 976 Score = 71.9 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 31/141 (21%), Gaps = 7/141 (4%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPV 246 + E+R L A + + L Y Sbjct: 297 AIKQDITEQVHRFNQLKISEERYRNLMNAVADGIFIHNLQGAFLEVNEAACLSLNYSREE 356 Query: 247 FFIIFTLGVGK-LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + LN W +N + T + + LAV + L Sbjct: 357 LINSYVWDIEVGFSQESLNQLWENVQKGPINTEGMHRRKDGTTFPVDVRLAVFNATGEKL 416 Query: 306 L-YMVRIYHRSEWLNRRWHLQ 325 + +VR + Sbjct: 417 VLAIVRDITLQKRSEATIRKL 437 Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 12/182 (6%), Positives = 43/182 (23%), Gaps = 19/182 (10%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 D +F + M F+ +++ A+++ ++ ++A Sbjct: 144 QDNLFCISFWFDSIDCNFEMLMPFFKDILGLLNLSLAKLMNKKREKLLTTILEKAGDSVE 203 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFF----IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + ++ + I Y + F + + + Sbjct: 204 ITNE--EAVIQYVNPAFENITLYNAREAMNKTVASLLRSPVEDAQLFEEINQTLKSGNTW 261 Query: 276 NYNQNFLQGVETEYSLAFILA-----VLISFSVCLLYMVRIYHRS-------EWLNRRWH 323 + + Y +A + + + + + + R+ Sbjct: 262 KGQIRSRKKDGS-YWVAQTIIVPVMDDELGRITQHIAIKQDITEQVHRFNQLKISEERYR 320 Query: 324 LQ 325 Sbjct: 321 NL 322 >UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW15_DESAC Length = 893 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 100/582 (17%), Positives = 200/582 (34%), Gaps = 61/582 (10%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL--------------CTPYE 235 I+ + E+R +L V + L Sbjct: 317 ILESFIDIQARKLAEQALRESEQRYRSLYTAMREGVAIGELVYDAHGVACDYILHDVNRA 376 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + G P++++ V + + F + Sbjct: 377 FSEMLGVASEELVGHRASEFYHGAPPYIHILDEVVKYGIPK-EYELPLSDLEKV---FHV 432 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------ 349 +V ++ S+ + A D LT LPN ++ +Q Sbjct: 433 SVSRPEKERFACIINDVTDSKKAQQEIERLAYYDTLTGLPNRVLIKDRLQQAVAQAQRSR 492 Query: 350 --KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 L +D+ + ++ G+ ++ + + L +++ + + ++ G E +++++G Sbjct: 493 ALVGVLALDLDHFKKINDSLGIGCGDQMLKLVSQRLKGHLRQGDSVARMGGDEFVILITG 552 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 +++ + + + + + L + + + + LL Q Sbjct: 553 IKSQNDIVTAAGKILDLLAEPVTIDGHDLVSTGSLGISVYPTDADEVDLLLKHADTAMYQ 612 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + L ++ + +++ L + + AL + +L LY QP + G + Sbjct: 613 AKETGRNL-YQFYSPDMNERAFERLFLDSDLHRALARNELELYFQPQIDLAQGHVVGAEA 671 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 +L G ++P F+PL + +L V+E + R +VNL Sbjct: 672 LLRWNHATKGQISPVVFIPLAEESDLILDIGGWVIEEACRHARQWHDQGYTDLRVAVNLS 731 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQ-------------AVILEITEEQAFSNAESSMYNI 627 ++ + R+ + E + + Sbjct: 732 ARQFRS-DLPDIVARVLHETGLPAHLLELELTESLLMER-------------PELARTIL 777 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G ++IDDFGTGY++ LK D +KID FVKD+ + DA+IV +I LA Sbjct: 778 NKLRYLGNHLSIDDFGTGYSSLSYLKHFPIDRLKIDRSFVKDLNVDPDDAIIVEAIIALA 837 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+VVAE VET Q + + G +QGY++ RP P D Sbjct: 838 HGLRLNVVAEGVETSDQFEFMRQRGCDEIQGYVVARPMPADD 879 >UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacteria RepID=A4C9D0_9GAMM Length = 1503 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 103/550 (18%), Positives = 204/550 (37%), Gaps = 26/550 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG------- 256 S + V +L F T Sbjct: 941 EFESEENARLFGAAFEYTRDWVFILDKQFRVRATNQVLRESFNFNASHTSSRKLSLGLNK 1000 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYH 313 R +L + + ++ + + + ++ + + + ++ Sbjct: 1001 DTRLNYLRIIAKLKAGEHFQSDEVVVTADGIAHPVIIKVSTVGDKDNNINNYIVVITDIS 1060 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + + A D LT LPN L + + + +D+ + ++ Sbjct: 1061 EQKDAEKELRVLANYDTLTKLPNRSLLLDRISHATELSRRHKNRLALLFIDLDHFKQVND 1120 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + ++ + L +++ + + +L G E ++++ +T L + + Sbjct: 1121 TLGHDLGDTLLITVAQRLKYGLRKQDTVARLGGDEFVILIEDIDTIDELIPVCRKICEEV 1180 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + N + + F + + LL + + ++ Sbjct: 1181 SLPVQLGNHRMTVEPSIGVAIFPDDADNSLDLLKSADIAMYHAKKRG-GATYQFFHQEMN 1239 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFL 539 + ++V L N ++ A+ + Y QPI + +G++ +L + + +++P +F+ Sbjct: 1240 HKIQRKVQLENELKEAVKLNQFVNYYQPIISATDFTLKGFEVLLRWRQDNK-LISPAEFI 1298 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 P+ L L ++ L K SVNL + I ++ + + Sbjct: 1299 PVAESMGLITTLTFAALTRAMQDLKAWLVSKPDCYVSVNLSARDFEHETIGEKLTDIILQ 1358 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 ISP V+ EITE +++ ++ + L + G RI +DDFGTGY++ LKR D+ Sbjct: 1359 ADISPTQVVFEITESALMQDSQKALEAMLILKQKGCRIYMDDFGTGYSSLSYLKRFPIDV 1418 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV DI + D I+ S LA + S VAE VET+ Q L LG YLQGY Sbjct: 1419 LKIDQSFVADIGQDASDEAIIHSTLALAHSLGKSCVAEGVETKAQVEFLQMLGCDYLQGY 1478 Query: 720 LIGRPQPLAD 729 L +P P + Sbjct: 1479 LFSKPVPSNE 1488 >UniRef50_D1REK0 Putative response regulator, PAS/GGDEF/EAL domain-containing protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1REK0_LEGLO Length = 752 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 92/552 (16%), Positives = 182/552 (32%), Gaps = 31/552 (5%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFIIF-------TLG 254 + ++++ + + Sbjct: 193 LEKSLSLTRATLESSINGIVVVNNENKVVDWNQNFIDMWSLSHELIDGKDYDKIQIYIQD 252 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 F + + L + V ++ + Sbjct: 253 KLLDANKFHEQIQKIQLNPETTEITTLQLKDGRFFECYSQLQKMNKKIVGRVWSFQDISE 312 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRH 366 L + QA D LT LPN L + + +D + ++ Sbjct: 313 RISLTAKLEFQATHDALTELPNRILLFDRIHHAITHAQRINSLFAVIFIDLDRFKLINDS 372 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL--SGPETEGRLQHMVNILNS- 423 + ++ I L +M+E + + +L G E + +L + + + + + + Sbjct: 373 FSHAAGDSLLKEISSRLKKIMREEDTIARLSGDEFIFILLSESLKKPEDIMAICDKILAA 432 Query: 424 --RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + I + + + + + + L+ + A + Sbjct: 433 ITKAITISKREILITASMGISIYPQDGSNVDELIRNADLAMYNAKALGGNQ-YQFYSAKL 491 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKF 538 + Q+ +++ + +R AL +L L QP + + + ++ GI+ P F Sbjct: 492 NQQSLERLDKESALRKALLSNELYLEYQPQYDVKTEQLIAVEALIRWKHPKKGILLPMDF 551 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +PL + L VL + +VN+ +Q + + R+ Sbjct: 552 IPLAEETGLIVPIGEWVLRTACIQNKAWQDKGFPPFSVAVNVATKQFMQPDFVQMVKRVL 611 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + P+ + +E+TE N + +I++L G RI +DDFGTG + L+ L Sbjct: 612 NESGLLPEYLEIEVTENILIRNI-AVTESIKELKNLGIRIVLDDFGTGNSCLSYLRALPI 670 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID F+ DI N DA++V++I LA + S VVAE VE Q L LQ Sbjct: 671 DQLKIDQSFIHDIEENNSDALVVKAIISLANSLSFDVVAEGVENLLQVDFLKNQHCDKLQ 730 Query: 718 GYLIGRPQPLAD 729 GY +P + Sbjct: 731 GYYFSQPVSAEE 742 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 117/587 (19%), Positives = 202/587 (34%), Gaps = 29/587 (4%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + +SL + F + I S A++ A + F Sbjct: 713 LWINLTVSLVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTD----- 767 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 + +L I Y + R ++ L V T+ Sbjct: 768 -LKGSILAVNPAFSQITLYEAAEVLGRNARILQSGRQNREFYVALWQDVLTIGSWRGEIW 826 Query: 281 FLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + + ++ + + + R + ++H A DPLT LPN Sbjct: 827 NRRRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNR 886 Query: 338 RALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L + + L +D + ++ G +R++ L + + Sbjct: 887 LLLRSRLDHAIERARRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGD 946 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFD 445 L +L G E + V+ + + + + + +G F Sbjct: 947 TGTLARLGGDEFVAVIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFP 1006 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + LL Q ++ + + ++ L +R AL+QGD L Sbjct: 1007 EDGDNPDTLLQHADTALGQVKGAGGGAYGFY-TRTLTERISARLGLEAGLRHALEQGDFL 1065 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ QP+ E EG + ++ DG ++ PD+F+PL L VL + Sbjct: 1066 LHYQPLIALGTGEVEGVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRT 1125 Query: 563 LATHPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + +VNL P I + R+ ++ + + LEITE Sbjct: 1126 MQRWRSQGMPLTVLAVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGA 1185 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 ++ + L G R+AIDDFGTGY++ L+R D IKID FV+DI + I Sbjct: 1186 AAEAQMTGLKHLGVRLAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITA 1245 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I + + L V+AE VET Q L + QGYL RP A Sbjct: 1246 TIIAMGRTLKLHVLAEGVETTDQLDFLSRKQCDSAQGYLFSRPITAA 1292 Score = 64.2 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 12/151 (7%), Positives = 36/151 (23%), Gaps = 12/151 (7%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDF 238 + ++ RR E R AA+ + L ++ Sbjct: 599 FSRLELLARADGLIADHRRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCD 658 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTW----AVSTLCLLNYNQNFLQGVETEYSLAFI 294 I GY + + +L + + +++ + Sbjct: 659 IVGYPPDELLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLT 718 Query: 295 LAVLIS---FSVCLLYMVRIYHRSEWLNRRW 322 ++++ + +V + + Sbjct: 719 VSLVRDIHNAPAYFISVVENIQSRKEAELQL 749 >UniRef50_B3PID2 Sensory box protein n=2 Tax=Gammaproteobacteria RepID=B3PID2_CELJU Length = 844 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 107/580 (18%), Positives = 213/580 (36%), Gaps = 35/580 (6%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL-----SVLLLLLCTPYEND 237 +++ + R E+ + + ++ L Sbjct: 249 IASFNQLLDVVELSLAKRRAVELALRKSEEHLRQIIDHLPVMIGARNIAGYYLFANKALA 308 Query: 238 FIAGYLVPVFFIIFTL-----GVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSL 291 GY + V + N + L+ + F+ + L Sbjct: 309 NELGYTPEQMRNLHVRQLLKNSVFDIDTMLQNDYRVIRGNEELDVIEERFITASGKQLFL 368 Query: 292 AFILAVLISFSVCLLYMVR-IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 + L + + +V + + A D LT LPN L + Sbjct: 369 QTHIMPLAFYDEKVALIVSVDITERKNAQAKMEFMAHHDALTGLPNRVQLVERLEHELRR 428 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + +D + ++ G + + + L ++E + + +L G E + Sbjct: 429 AERHGYYGAVLFIDLDQFKNINDSLGHPVGDKVLEVVATRLQQSVREEDLVARLSGDEFV 488 Query: 403 LVLSGPET--------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 +VL+ + G + + + S+ +++ L + + ++ L Sbjct: 489 VVLTVLDQNMETAALRAGEISEKIRSIISQPYVYDSMELRVTCSVGVVVYPDKNNSVHEL 548 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 L Q +++ E ++ + ++Q+++ + AL++G LY QP + Sbjct: 549 LRYADTAMYQVKEKGRD-SIEFFNEEMADKVSRQLVMEGDLHRALEEGQFELYYQPKMDV 607 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + +L G+++P F+P++ + VLE K L Sbjct: 608 ISSRVVGAEALLRWKHPTKGMVSPVDFIPVLETSGMIIDVGQWVLEDACKTLVKWSEQGL 667 Query: 572 ---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 G + S+N+ P + +I +R+ I P ++ +EITE E ++ + Sbjct: 668 WHEGMKLSINISPRQFRRAAFVQDVIDTIERFPIPPNSLDMEITEGIVIQRVEDAIATMT 727 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L G ++DDFGTGY++ LKRL +KID FV+DI+ + D ++V +I + Sbjct: 728 LLSDKGISFSLDDFGTGYSSISYLKRLPVSTLKIDQGFVRDIIVDRNDRVLVETIITMGN 787 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +VAE VE +Q A+L G + QGYL P LA Sbjct: 788 LLDMELVAEGVEEAEQLAILKAFGCHFYQGYLFSMPVELA 827 >UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q2Y9Y0_NITMU Length = 756 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 104/637 (16%), Positives = 222/637 (34%), Gaps = 57/637 (8%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 P+ + T T + ++ ++ Q ++ S Sbjct: 94 ALPVLVITAQPQHKERALRAGAKGFITKPFDRLQMLTHIH-DVLEIRQLQKQLQKFAVRS 152 Query: 208 ----------LGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFFIIF 251 L+ + E + + G V + Sbjct: 153 EGVSEEKIFPRETGDLFDQLAGNLPQVFWIWDVHDQTFRYINPEWEKMTGQRVGRGDRLE 212 Query: 252 TLGVGKLRYPFLNLTWAVS--TLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--CLLY 307 + + + ++++ L + + + + ++ Sbjct: 213 KIFEAVHPEDMERVLREAADLPRGGVDHDYRLLLPDMSIRWVHSRTFPIKDSAGVHRIVG 272 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDN 359 ++ + + +++ + D LT LPN ++ S L IDN Sbjct: 273 VMDDITQRKQADQQLLQVSRYDALTHLPNRILFYESLRKVIKQSEMNHRIVSVLFLDIDN 332 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + +R LL ++ + + ++ G E +L + G + + Sbjct: 333 FKNINDTLGFALGDELLREFSLRLLECLRVTDIVARIGGDEFGCILVSADDLGNAGLVAS 392 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + + + + + L+ QS Sbjct: 393 KIREALRQPFDLQGHQVTVTASIGISVYPIDSIDADTLVKNGDTAMYQSKTAGRD-TYRF 451 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIM 533 ++ + +++ N +R ALD+ + +L+ QP + G + +L + + G++ Sbjct: 452 FTPEMNIRAIEKLDQENALRKALDREEFVLHYQPKVDLSNGWVTGMEALLRWKRPEHGVV 511 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGR 592 P +F+P + Q L R V+ES+ + +A SVN+ + + Sbjct: 512 EPLEFIPALEQTGLITRVGAWVIESVCRQIAEWRHAGIGEIPVSVNVSGRQFSRSTLNQD 571 Query: 593 I--------------------IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 + R + I + LE+TE +A+ ++ +++L Sbjct: 572 VIRATQANGIQPALLEFELQTERALRENSIDSDLLELELTESSLMMHAKKTVSILQRLKA 631 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G +I+IDDFGTGY++ +KR D++KID F+++I TN+ DA I +I D+A + + Sbjct: 632 LGIQISIDDFGTGYSSLAYVKRFPIDVLKIDRSFIQEITTNSADAAITTAIIDMAHSLHV 691 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VVAE VET +Q L G +QG+ + P P + Sbjct: 692 RVVAEGVETAEQFDFLKGRGCDEVQGFYLSPPLPANE 728 >UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BUE4_DELAS Length = 692 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 105/564 (18%), Positives = 207/564 (36%), Gaps = 24/564 (4%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGY 242 + V E+R + + ++++ ++ +AGY Sbjct: 115 LQGAVVQITDVSHHHHVAQKVRDSEERMRKFTEVTTEAIVMHRDGLIIDGNEALSRLAGY 174 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + L + L + + ++ + + + Sbjct: 175 TLDELTGRPILDYICPEFRLYAL-QYMRSGREDRFDGAIQHKDGHRIPVEIEAKTMPAEG 233 Query: 303 VCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 + +VR + R A D LT LPN L Q Q + Sbjct: 234 EPYRIVLVRDITLRQLAQERMDFLAQHDQLTQLPNRVRLIQMLRQALSLASVKRRALAVL 293 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D+ + ++ G + + + L ++ ++ + ++ G E ++VL+ Sbjct: 294 IIDLDHFKTINDSLGHQAGDLLLCEVAQRLRGSVRAHDLVARVGGDEFVVVLTDDPDPQE 353 Query: 414 LQHMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + T L + + G+ + + LL + + Sbjct: 354 TETQASHLQRIIEAPCAIDGTPLVISPCMGIAMYPGDGKNAEELLNRAESAMHMAKDSGR 413 Query: 471 VLALDSREEMVSGQTTKQVLL--LNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILAR 525 L GQ T+ +L +R AL++G+ LY QP + G++ ++ Sbjct: 414 -RNLQFYAPAQDGQATQAQMLMQEQQLRGALERGEFELYYQPQTFTADGRLAGFEALVRW 472 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTL 584 G++ P +F+ L + D VL + + SVNL L Sbjct: 473 RHPQRGLVLPGEFIGFAEARGLISAIDHWVLREACRQARQWQDEGLAPVPLSVNLSALEF 532 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q+++A + ++ + + + + +E+TE + ++ L G +AIDDFGT Sbjct: 533 RQRDMAREVAQVLEETGLEARWLHIELTESTLMHTSGQVQDTLQALQALGVGLAIDDFGT 592 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+R + +KID F+ D+ + D IV +I + + L +VAE VET Q Sbjct: 593 GYSSLAYLRRHPINQLKIDRSFIADVPDSEDDTAIVTAIVQMGHSLHLDIVAEGVETPAQ 652 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 ALL +LG +QGYL+ P P Sbjct: 653 LALLRELGCGMMQGYLVAPPLPAE 676 >UniRef50_D1U433 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U433_9DELT Length = 849 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 103/603 (17%), Positives = 212/603 (35%), Gaps = 31/603 (5%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 T++ + L + + ++R + R + E+R T Sbjct: 194 LAGYRNRLTILFVSILLIVAGLEFYVLRQISRSAREKAKIRQQRERLLEALRTGEERYRT 253 Query: 217 LSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA--- 268 ++ A + L + I+G+ +F L + + Sbjct: 254 IADFAYDWEIWLGTEGGVLYCSPACERISGHPPERYFEQPELLREIIVSEDRDAWDKYLL 313 Query: 269 -VSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHL 324 ++ + + + L + + + R + + + Sbjct: 314 FINNEVGGSLDFRIVTRSGQTRWLCVAGRAVSGIGMKPLGIRCSFRDITDRKEMEEQLRH 373 Query: 325 QALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 QAL DPLT L N + + L +D + ++ G Sbjct: 374 QALHDPLTELANRTLCLDRVGQAMRRAGRRENYYFALVFLDLDRFKVINDSLGHRFGDLV 433 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 + L ++ + + + G E +L+L + G +V + ++ + Sbjct: 434 LMETANRLAQHVRTLDTVSRFGGDEFVLLLDELASPGEAIRIVKRIRDALAKPFIFTGHE 493 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + +L + + Q+ + Q+ + Sbjct: 494 VQTTASFGIVLSPIPDIRASDVLQRANIAMHQAKEAGRNR-FKVFTTRMLESAVDQLTME 552 Query: 493 NTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R L+ G+ + QPI + + G++ + + G + P +F+P+ + Sbjct: 553 NDMRRGLESGEFHVQYQPIMDLDGSDIMGFEALARWDHPERGPIPPAEFIPMAEESGTII 612 Query: 550 RFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 + VL L LA SVNL + + +I + + P+ Sbjct: 613 KLGEWVLRESLLTLARWRAATPGAQDIFMSVNLSSKQFARMELDKLVIDALRAADLPPEV 672 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE + ++++ +++L K G R +IDDFGTGY++ +L++L D +K+D F Sbjct: 673 LKLEITETALMEHPDAAINVLKRLRKIGVRFSIDDFGTGYSSLSQLQQLPVDTLKVDRSF 732 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + + ++ + IVR++ LA + L VVAE VE Q L +L + +QG+ RP Sbjct: 733 ISRMKSDPENMEIVRAVIALAHSLGLDVVAEGVEDAGQLCSLMELKCESVQGFYFHRPLS 792 Query: 727 LAD 729 D Sbjct: 793 PTD 795 >UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBI7_METSD Length = 681 Score = 653 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 106/559 (18%), Positives = 195/559 (34%), Gaps = 25/559 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R + + + I S R T ++ L E+ + Sbjct: 123 RDVTDAIRREREYHSLIENSPNLIVRFDTACRRTFVNQKTANLYGVAEDVLLGKTPSEFP 182 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---C 304 G ++ + + + + LA + S Sbjct: 183 GGDSAYGYEQVVKEVFKSGRSAAMDLHWHA------PDGNSRIIHIWLAAELDASGLPIA 236 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 ++ M + + R H A D LT LPN L L Sbjct: 237 VIGMGQDVTETYEYQERIHHLAYFDTLTKLPNRALLIDRVEQTIAEAERHAYPFGLIMLD 296 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + + + L ++ + + +L G E +++S + Sbjct: 297 LDRFKEINDTLGHTLGDVLLCEVASRLEKCVRPYDTVARLGGDEFGILVSEMRVPENITR 356 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + + + + + + + + LL + Sbjct: 357 VADKVLQAFDQPFVVDGHDVFVTASLGIAAYPSDSQAVDDLLKYADSALFHAKHLGRN-N 415 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 ++ + ++ + +R AL + + LL+ QP+ + E G + +L G Sbjct: 416 FQFYSADLTIKAAERREVETNLRFALKKEEFLLHYQPLVDLATREIIGAEALLRWQHESG 475 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNI 589 ++ PDKF+ + + L V+ S + + +VNL L ++ Sbjct: 476 KLIMPDKFIGIAEETGLIIPIGEWVMRSACQVAVALNRGRPRPVTVAVNLSTRQFLHNDL 535 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I + + LEITE N ++ ++ L G I+IDDFGTGY+ Sbjct: 536 VSSIQAILAETGCHTDWIKLEITESLLLENTDNIQRMLQSLSAMGLCISIDDFGTGYSAL 595 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L R +KID F DI N A+IV++I LA+ + +VVAE VET +Q LH Sbjct: 596 SYLHRFPVRELKIDRSFTSDITDNAERALIVQAIVSLARNLNKNVVAEGVETLEQADYLH 655 Query: 710 KLGVQYLQGYLIGRPQPLA 728 K+G QGYL +P PL Sbjct: 656 KMGCPQAQGYLFSKPLPLE 674 >UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRK3_9GAMM Length = 992 Score = 653 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 100/612 (16%), Positives = 210/612 (34%), Gaps = 29/612 (4%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH---FAQIL 199 S P+ + ++ + + TA+ + L + Sbjct: 378 FFSAESLPVAMEKVRTQSETPYQATVITRDGTAIPVTVNGKAVLWNGQKARAASFRDITR 437 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIFTLGV 255 + E R LS L A +L+ ++ + G Sbjct: 438 RIEYQKRLMASEDRFRQLSDLVAEGLLIYSENKIIDVNQSLCELFGQRREDLLESDL-SE 496 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-LAVLISFSVCLLYMVRIYHR 314 + T L + + T + ++ + ++ +R R Sbjct: 497 LFSEQSLTAINNHPDTAAAL--ELSLERADGTLFPAEITTASMQFDDGLFIVLSIRDISR 554 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRH 366 + QA D LT +PN + EQ + + +D + ++ Sbjct: 555 YKEQEEHILYQAQFDLLTHIPNRFLAKDRAEQAIRNADKHDGKLALMFIDLDGFKKVNDS 614 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G + ++ R + +++ L + G E +++ + + + + Sbjct: 615 MGHEVGDQLLQQATRRFVSCIEKQHTLARHGGDEFIIIQEDIADPTDSEIVAEKILQQFS 674 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 N L + + + LL ++ + ++ Sbjct: 675 NPFSIENKQLIVTASIGISIYPDDANNYSDLLRAADIGMYKAKHDGRNR-FHYYTQEMND 733 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNK-----EGEGYDEILARLKYDGGIMTPDKF 538 T+++ L N++R AL + L QP+ + +G + ++ G ++P +F Sbjct: 734 IATRKLALDNSLREALQNREFNLVFQPLICNVKGQPKVQGAEALIRWTSPVLGQVSPVEF 793 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P Q L VLE + D + SVN+ P ++ + Sbjct: 794 IPHTEQSGLIIPIGRWVLEQACQQAKRWVDDGQEDVFISVNVSPRQFKGNDLLRDLTSAL 853 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + P + +E+TE + ++ + G +++DDFGTGY++ LK+ Sbjct: 854 ESSGLHPHHLNIEVTEGLLIEASPELNNTLQLITDMGINLSMDDFGTGYSSLNYLKKFPF 913 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 + +KID F+K++ N+ A++V + +A LSV AE +ET +Q L L LQ Sbjct: 914 NNLKIDRSFIKELPDNSDSAILVTATIAMAHQLGLSVTAEGIETAEQYNYLRGLRCDRLQ 973 Query: 718 GYLIGRPQPLAD 729 G+ +G+P P + Sbjct: 974 GFYMGKPVPANE 985 >UniRef50_D2UCH8 Hypothetical two-component system sensor protein n=1 Tax=Xanthomonas albilineans RepID=D2UCH8_XANAL Length = 716 Score = 653 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 102/613 (16%), Positives = 188/613 (30%), Gaps = 28/613 (4%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 + GD + V + + R I S Sbjct: 99 LALSEHLEGLTAIYLAEYRVDLTGDGVWRWARVRGRVVDYDAVGNPRRLAGTARDITSHR 158 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 A + R + L + I GY Sbjct: 159 QADLERRIAAEVLRSMSEAVAVLDEE------RRFISVNPAFTRITGYSEREVLGQPMTL 212 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRI 311 + + + + E + + ++ Sbjct: 213 IDHAPNVPPPPM--LDQGRHWRGDAWKRRKDGHEILCHMRRNTVVDADGRQSFQVVVLED 270 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + A D LT LPN L + Q + L +D + + Sbjct: 271 ITEQKRAEQELRYLANYDTLTSLPNRALLSERLARAIVRARRQAGAVAVLFLDLDRFKDI 330 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + +R++ L + + +L G E +V+ ++ + + + + Sbjct: 331 NDSQGHPVGDQVLRAVAERLQQAVGPQHTVARLAGDEFTVVVEDIVSQDEAESVAARVLA 390 Query: 424 R---QIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + ++ + + F + LL Q+ A Sbjct: 391 AFEPPLRLDDRREVAVSTSIGISLFPQHALLPSELLKHADTAMYQAKAAGR-RNAQVYSA 449 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 + T + L +T+R +L L QP + + +L D G ++P Sbjct: 450 SMDEATRHRATLASTLRKIPLDQELKLVYQPRYSLREQRVVSVEALLRWHSADFGPVSPS 509 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIR 595 +F+PL + L + VL L S+N+ + L + N+ + + Sbjct: 510 QFIPLAEETGLILQIGEWVLRQACSALRDWRQMGLTDLCMSINVSAIQLERSNLPELMAQ 569 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + V LE+TE S S + + G +AIDDFGTGY++ LKRL Sbjct: 570 ILAETGVPAANVELELTESVVMSQVGKSAEILHACRELGLTLAIDDFGTGYSSLAYLKRL 629 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + +KID F+ D+ + DA I +I + + L VVAE VE Q L + G Sbjct: 630 PINTLKIDQAFISDLSLDPDDASITSTIIAMGHSLDLKVVAEGVEQPSQLMFLREHGCDE 689 Query: 716 LQGYLIGRPQPLA 728 +QG+L+ Sbjct: 690 IQGHLVAPALEPD 702 >UniRef50_C4KD26 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Betaproteobacteria RepID=C4KD26_THASP Length = 703 Score = 653 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 113/609 (18%), Positives = 195/609 (32%), Gaps = 29/609 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 L ++ A + F A I L + R ++ A R A Sbjct: 76 ALPILMVTGMDDTASIEAAFEAGATDFVAKPISWPLLGHRVRYVLRATRAATALRMANAR 135 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + + ++ L + L Sbjct: 136 NAAMLDAFPDTLLRLDAADRIVELRAAPTGVPSCCMPAVGQTLAEAYPHEVATLLAQALD 195 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 A + + ++ + L ++R + R H A Sbjct: 196 EARRSRQPSTVDFPLACRTGRPCHQEARVSAIDD--GEALCLLRDITERKEYETRIHHLA 253 Query: 327 LTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT L N R+ + E+E + L +D + ++ G ++ Sbjct: 254 YFDSLTGLANRRSFLERLEREIRRALQNKWRLAVLFLDLDRFKSINDTLGHAAGDALLQQ 313 Query: 379 ICRTLLPLMQENEKLY------------QLPGSELLLVLSGPETEGRLQHMVNILNS--- 423 L + + + + +L G E ++L + + + Sbjct: 314 AAERLRAITRPGDIVAHDTDRMGTAEFARLGGDEFTVLLPTISRPDDALAIAERIRASIC 373 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 L + F + E L+ + A+ ++ Sbjct: 374 APFAIEGQELCVTTSVGIAVFPDDGEDAATLIKHADIAMYDAKANGRNGC-RYYNPALTA 432 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 + +V L +R AL +L+L QP + + ++ DG ++ P +F+P Sbjct: 433 EAVHRVELEAGLRRALAHDELVLMYQPQVEVRDGSIATVEALVRWQTPDGRLVPPLEFIP 492 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L VL A R +VNL P+ + RI Sbjct: 493 FAEECGLIDAIGSWVLRRACHDAAQWQRRGLDLRVAVNLSPVQFRASGLLDRIREALADS 552 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + + LEITE ++ + + L G IA+DDFGTGY++ LKRL D + Sbjct: 553 DLPAERLELEITESALMADDADTHATLAALRTLGIGIALDDFGTGYSSLSCLKRLPLDKL 612 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV + + + IVR+I LA+ + AE VET Q LL +L LQGYL Sbjct: 613 KIDRSFVSGLPDDVDNHAIVRAIVALARHLGFRIAAEGVETAAQAELLGELEADSLQGYL 672 Query: 721 IGRPQPLAD 729 R P A+ Sbjct: 673 FSRAVPAAE 681 >UniRef50_D1T3A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3A4_9BURK Length = 1083 Score = 653 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 115/768 (14%), Positives = 240/768 (31%), Gaps = 61/768 (7%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L + + ++ + ++ + + + ++ R V T Sbjct: 297 LHARVHDLFARMWLHLGTAVLLLGCILSMV-TLVARQIAKPLQQLARVAGEVRR----TG 351 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + + T + R +L + QR L P+ Sbjct: 352 DHTLRAHWNSGDEIGRLVTAFNDMLAQLDRERLLQQELAASARAAEAQRELVEALPIPMV 411 Query: 136 IKCSMY-------LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYY--- 185 + + + + + L ++ + Sbjct: 412 VTSVPEHEVLHSNAPAGHWLDGVTHDPWRAGLEPGVRARFFQRLADHGVVDEFEVRWKGG 471 Query: 186 ---LTRMIVSPHFAQILWRRDIAPS---------LGKEKRAFTLSWLAALSVLLL----- 228 ++ + + + + + ++ ++++ Sbjct: 472 KEPAWAVLSARRLRFQGRDAMLTAFAPINVLKVMEQRLELWAKVFEASSEGIIIMNAAQR 531 Query: 229 LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 ++ Y + L P + A++ F + Sbjct: 532 IVSVNQAFCRSTHYDFYEVIGEQLGMLLDAPGESAPGETIARALADKESWQGEVRFRRRS 591 Query: 286 ETEYSLAFILAVLI-----SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y +++ + + + + R A D LT LPN Sbjct: 592 GESYPAWLMVSAVREGGKGGAVTNHIGIAIDITDRKRNEERIRFLAHHDVLTELPNRSLC 651 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 Q + + +D + ++ G + +RS+ L+ ++E + Sbjct: 652 VQRLQAGLEQAARTGEQLAVLFIDLDRFKAINDTLGHHIGDGLLRSVAARLVQSVREGDT 711 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNI----LNSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++V+ E ++ +V L + L + + + Sbjct: 712 VSRLGGDEFVIVMRQVEGAQQVLRVVEERLIPLIRQSHPVEAHELSVSCSVGIAVYPEDG 771 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L L+ + ++ +A + + + ++R AL++ + L+ Sbjct: 772 ADLDELMRRADAAMYEAKTAGRDMA-RLYSLETDRRVQARQAMEQSLRRALERREFALHY 830 Query: 509 QPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L G + P +F+P+ + L VL+ A Sbjct: 831 QPRMSARTGMPTGLEALLRWRHPSLGEVLPGEFIPIAEEAGLIRAIGAWVLDQACAQWAA 890 Query: 566 HPCD-----KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 G SVNL L + I L R+ + + + LEITE Q NA Sbjct: 891 WRASEAGGGLAGLPVSVNLSAAQLADPLLVPDIAALLARHGMPARCLELEITESQLMDNA 950 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + + L + G +++IDDFGTGY++ LKR D +K+D F++D++ + D I Sbjct: 951 GVAQGQLAALKQLGVQLSIDDFGTGYSSLAYLKRFAIDKLKVDKSFIRDMLASPADMAIT 1010 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 R+I L + L VVAE VE +L L +QGYL R P Sbjct: 1011 RAIIGLGRTLGLQVVAEGVEDAATLRMLESLDCDEVQGYLFSRALPPE 1058 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 110/578 (19%), Positives = 205/578 (35%), Gaps = 25/578 (4%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP- 233 F L+ + H ++ + E+ +L A V + Sbjct: 383 GEYAKPKHFRTLSALTHLMHASKDDIKMLNNSLSVSEQYYRSLFDNNADFVYSTDMQGNF 442 Query: 234 ----YENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 G+ + + YN Sbjct: 443 TSINPAFKRNFGFNEKEVIGKPALRFIDSRDVARVRRHFYRTVNGKEQYYNLEIQSKNGA 502 Query: 288 --EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 Y L I + + + R + + + A D T LPN + + Sbjct: 503 RNLYELKNIPITVEGEPAGIYCIGRNITEQKRIEQEMTQLAYYDKDTGLPNRLKFMEELD 562 Query: 346 Q--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + + ID + ++ G +R I + ++ + Sbjct: 563 DLLQKAKKKKRPLAVLFMDIDRFKLINDSLGHYAGDQILRQIAGRIEAILPPGSFFGRFS 622 Query: 398 GSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G + L+L+ R+ + N + +++ + + G+ + L Sbjct: 623 GDKFTLILAKEADSSRVTKLSNHILQAISSPVYYGEQEFFITGSIGASLYPGDGHEKETL 682 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 + +S L ++ QT ++ L + +R AL + + L QP+ N Sbjct: 683 MKNADIAMNRSKHQGGNR-LTYYSTEMNEQTLLKLELESYLRKALQKKEFFLCYQPLTNL 741 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 E G + ++ G+++P F+PL + L VL++ + Sbjct: 742 ETGAIYGSEALIRWNHPKLGLVSPGDFIPLAEETGLINEIGHWVLQTACRQTKEWHNKGL 801 Query: 572 G-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 G SVN+ Q +++++ K + PQ ++LE+TE N E+S+ I++L Sbjct: 802 GSLTVSVNVSVHQFQQPGFVHKVLQVLKETMLEPQFLVLELTESSMLRNMENSILVIQEL 861 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G R+AIDDFGTGY++ LK L D +KID F+ ++ + + D IV +I + Sbjct: 862 QRNGIRVAIDDFGTGYSSLSYLKHLPIDALKIDRSFIDNLRSGSPDIAIVNAIITMGLGL 921 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VVAE VET +Q LL L + QG+ I RP Sbjct: 922 HVKVVAEGVETAEQMRLLKDLKCHFAQGFFIHRPLGAE 959 >UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=Q12PF1_SHEDO Length = 888 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 99/551 (17%), Positives = 198/551 (35%), Gaps = 29/551 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVF---FIIFTLGVGK 257 + + A T+ V++ I GY + Sbjct: 326 AAEEQLNLAATVFSNTVEGVVITDRKGFITEVNSAFTKITGYELDEVKGKNPNVLSSGHH 385 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHR 314 + F L + + Y ++ + + + Sbjct: 386 DQLFFEKLWNTLLIQGRWQGEIWNRRKNGEVYPQEITISAVYDDNDTIAYFVAVFTDVSE 445 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + +L DPLT LPN ++ + + +D + ++ Sbjct: 446 QRNTQAKLDKLSLHDPLTQLPNRAQFMSRIDNAIYYAKQEGTQLAVVFIDVDFFKHINDS 505 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--- 423 G + + + L ++ L +L G E +L+ + L +VN + S Sbjct: 506 LGHVAGDTILVELANRLSSILHPGAVLSRLGGDEFS-LLTNMASTDNLIAIVNRIFSVFE 564 Query: 424 RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 N + + + + + LL ++ E ++ Sbjct: 565 APFSCSNGQSIRLTASMGLALYPSDGKDNDGLLRNADAAMHRAKQDGRN-NYAFYTEAMT 623 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFL 539 ++ + + L + + L L QP + E G++ +L G ++P F+ Sbjct: 624 QESVRLLQLQSALHEGLKMQRFSLVYQPKVDLHSLETMGFEALLRWNDPILGSVSPAVFI 683 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L + VL++ + K R +VN+ L L + + + ++ Sbjct: 684 PIAEKTGLINEIGMWVLKTACEQGVRWLSQGKLFNRIAVNVASLQLQRNSFVDDVQQVLL 743 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + Q + LE+TE N ++ +++L + G +A+DDFGTGY++ LK+L D Sbjct: 744 DTGLPAQHLELEVTESCMLQNPAEAIIELKRLREMGITLAMDDFGTGYSSLSYLKKLPLD 803 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+K+IV + +A I +++ L A +L +VAE VET++Q L + QG Sbjct: 804 KLKIDRSFIKNIVQDANNAAIAKAVIALGHALNLQIVAEGVETKEQAEFLRLNDCEQAQG 863 Query: 719 YLIGRPQPLAD 729 Y P+P + Sbjct: 864 YYFSHPKPSHE 874 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 116/693 (16%), Positives = 216/693 (31%), Gaps = 25/693 (3%) Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 + V T L A + + G T Sbjct: 375 LIADAVWRIVRQRRAETALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPSVEKLRGFT 434 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLV--GSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 S V Q+ L + L + L F G+ + + + Sbjct: 435 SAEVMQQTLAQTLCPSSIPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTEIS 494 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-LLLCTPY 234 IV + + ++ ++ Sbjct: 495 TNGMRNEQGDFVG-IVGVSRNITERKAQQQQLQLAAQVFAQGREGITVTDARGHIIMVNR 553 Query: 235 ENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 I GY + +L++ A++T + T Y Sbjct: 554 AFSEITGYTQAEVLGQNPRILKSERQSPEFYLDMWTALTTSGHWAGEMWNRKKDGTVYPE 613 Query: 292 AFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----- 343 ++ L + ++ R + D LT LPN L+ Sbjct: 614 WMAISALRDSQGLTTHYVASFSDLSTAKAAESRIQWLSQFDTLTGLPNRTLLQDRTALAL 673 Query: 344 ---PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + + ID+ ++ G + + + R L ++E + + ++ G E Sbjct: 674 SMVQRAREPLTMLLVAIDHFGAVNDTLGHQLGDELLVEMARRLSDSVREQDTVSRMGGKE 733 Query: 401 LLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +LVL G G +L SR L + F N L + Sbjct: 734 FVLVLPGTPAMGAAHLATELLWKLSRPCSLGMHELTLTASIGIASFPDNGADFDTLFKAV 793 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 ++ + + Q L+ +R A+ L L QP + + Sbjct: 794 EIAMHRAQLKGRD-TYQFYSDDMYEQVLAHDRLIKALRQAIVLDQLQLVYQPQVDLQTGQ 852 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR- 574 G + +L + G ++P +F+PL + L VL + + Sbjct: 853 ICGVEALLRWQHPELGAVSPGQFIPLAEESGLIIGIGEWVLRRACQDIRRWLDHGIKVPH 912 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++N PL N+ ++ I P + +E+TE + + ++ L G Sbjct: 913 VAINASPLQFRDNNLVLQVKAALTESQIDPALIYIEVTESALMDDVPRNEAMLKALKDLG 972 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++++DDFGTGY++ LKR D +KID FV+DI T+ D+++V+ I +A + V Sbjct: 973 IKLSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQSDSLLVKVIVSMAHGLGMKV 1032 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +AE VET+ Q ++ +QGY +P Sbjct: 1033 IAEGVETEAQCEIMRTSICDEIQGYFFCKPISA 1065 Score = 55.0 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 24/232 (10%), Positives = 51/232 (21%), Gaps = 20/232 (8%) Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 T TS L G+ + + + Sbjct: 6 VTRTPDDLAGTSLIRAAGRLVLVYAVFAGLWIWLSDELLAWLVSDPAEIVQASIFKGWLF 65 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 V SL L+ +L L + + A + ++ L + ++ Sbjct: 66 VVATSLLLYGLLRRLLRQSLVASMRE--------QEAQAENHRSQQLLTALIDSSTDAIF 117 Query: 227 LLLLCTPY------ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL--TWAVSTLCLLNYN 278 L Y + T + + ++ +Y Sbjct: 118 AKDLAGRYLLFNHETTRVMGTTPERALGHDDTALFPPEQAELIRANDQRVLALNRTTSYE 177 Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQAL 327 + LA L + ++ + R + R L+A Sbjct: 178 ETLETVDGERVFLATKG-PLRDSNGQVIGLFGISRDITDRKRDETRLTLEAR 228 >UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter RepID=B8H1B9_CAUCN Length = 842 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 136/750 (18%), Positives = 247/750 (32%), Gaps = 45/750 (6%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFL-AWMPLCVMLSILFIFGWRGVVPVLCG 70 I + + I ++ +S + H + + W L + ++L + GW G Sbjct: 74 SILRMTPVMMSANIAIAFLVSLAGMSHPHRVGIGIWAALVISYALLGLRGWVSAQRRKTG 133 Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 + LQ ++ +L V + + Sbjct: 134 KAAVSARGVRRVVLQA--------ALLGLLWGVLPVLTFRLGDTSAMPMMVASVIAGMIG 185 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF-YYLTRM 189 + ++ + S + + L L ++ R+ Sbjct: 186 CGGFALLTLPAAALAYSTPMVLGSLYMLGTSGDPILYALGGLLVFCYAVVIVSCLSHARI 245 Query: 190 IVSPHFAQILWRRDIA-----PSLGKEKRAFTLSWLAALSVLLLLLCTPYEN-----DFI 239 A + S +E + L + A L + D + Sbjct: 246 FAERLVAADELEKQKQVVSLLLSDFEEGASDWLWEVDAAGRLTYVSDRMAAAAGVDKDAL 305 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET--EYSLAFILAV 297 G + G + L T + + + A Sbjct: 306 LGQPMSDLCGAAEAPGGPVAA-LSALFAEQKTFRDVVVSITVADDAGRPATHWWALSAKP 364 Query: 298 LISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQEA- 348 + + + ++ R A D LT LPN +L Q + Sbjct: 365 VHDLDGLFVGFRGVGADITQAREDQERISHLAHYDVLTQLPNRLSLLQNLGKAWMDHGRD 424 Query: 349 ---GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 G + CL +D+ + ++ G + + + L + E + +L G E +V Sbjct: 425 KTSGCAVLCLDLDHFKGVNDSLGHPVGDALLMQVASRLRSCVGETGMVARLGGDEFAVVC 484 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + L + + S + +G + + LL Sbjct: 485 APSPGHEALSALSQSIVETLSAPYDILGHNVLIGASVGIAVAPFDADDPDGLLKNADLAL 544 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 ++ A E + ++ L +R AL + +L L+ QP+ + E G+ Sbjct: 545 YRAKGDGRG-AYRFFETAMDVWAQERRALEMDLREALARDELKLFFQPLIGRRDNETTGF 603 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + +L G++ P F+ Q+ L R VL + AT P +VNL Sbjct: 604 EALLRWQHPTRGLVPPSDFIECAEQWGLIGRIGEWVLNEACRTAATWPS---HLTVAVNL 660 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P ++ ++ K ++P + LEITE ++ ++ + L G +IA+ Sbjct: 661 SPNQFASGDLVDQVRAALKASGLAPARLELEITEGLLLHDSAKTLEQLAALKALGVKIAM 720 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L R D IKID FV ++ N A I+R+I L + +L V AE V Sbjct: 721 DDFGTGYSSLAYLWRFPFDKIKIDRSFVAEMQDNVAIADILRTIALLGQTLNLEVTAEGV 780 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ETQ Q LL ++ QG+L GRP P+ D Sbjct: 781 ETQAQARLLAEMRCDQFQGFLFGRPMPVGD 810 >UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Alphaproteobacteria RepID=A6UJR0_SINMW Length = 1071 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 108/587 (18%), Positives = 202/587 (34%), Gaps = 34/587 (5%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + + T L + R I A R + + ++ SV+L Sbjct: 484 VIAAPITDNLGKPSRILSIWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTMDSVML 543 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF-LNLTWAVSTLCLLNYNQNFLQGVE 286 L + ++ + I K F + C + E Sbjct: 544 LDAD--WRVRYLNENAKKLLQIGDEALGKKFWKLFPEEEMGNFAKHCREVMERRVRSFFE 601 Query: 287 TE-----YSLAFILAVLISFSVCLLYMVRIYHRSEWLNR-------RWHLQALTDPLTLL 334 + + R + A D LT L Sbjct: 602 DHLPSLGRWIEANASPTQDGISIF---CRDITERRRAEEDTLLAQKQLAHMARHDMLTGL 658 Query: 335 PNFRALEQAPEQEA------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 PN + EQ + CL +D + ++ G +R + + L+ ++ Sbjct: 659 PNRMFFRECFEQALNESRHARMAVLCLDLDGFKAINDTLGHPAGDVLLRQVSQRLIQSVR 718 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFD 445 E + +L G E ++ ++ H+ L S +G Sbjct: 719 TTETVARLGGDEFAIIQPLAKSRDEAFHLAQRLIDTLSEPFSIEGAAATVGTSIGIAFAP 778 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ + + + + Q + +R AL + Sbjct: 779 EDGTSADELIKAADIALYSAKSSGRG-TYRLFDVAMHAQLQAHQQMKVAMRDALANREFE 837 Query: 506 LYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ QP+ N E + +L G++ P +F+P+ + +L+ + Sbjct: 838 LHYQPLVNLESRCVSCCEALLRWRHPQRGMIAPSEFIPIAEETGAIVLIGEWLLDEACRQ 897 Query: 563 LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 A P +VNL P+ +N+ G + H+ P + LEITE +E Sbjct: 898 AARWPER---VSVAVNLSPVQFKHRNLVGAVANALSSSHLDPARLQLEITETVLLDESEH 954 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ ++ L + G +IA+DDFGTGY++ L+ D IK+D FV+D+ IV++ Sbjct: 955 NLELLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGRESLAIVKA 1014 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L ++ ++ E VET+ Q A+++ G +QGYL RP P A+ Sbjct: 1015 VAGLGQSLGMTTTVEGVETEDQLAIVNSEGFDEVQGYLFSRPLPAAE 1061 Score = 64.2 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 9/138 (6%), Positives = 24/138 (17%), Gaps = 11/138 (7%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPV- 246 RR E R ++ A + + + G Sbjct: 250 LLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEA 309 Query: 247 --FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISF 301 F + + + A + + + + + Sbjct: 310 LGFGWVDVIHPDDRQAVQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVGQPRFSADGT 369 Query: 302 SVCLLYMVRIYHRSEWLN 319 + + V Sbjct: 370 FLGYVGSVLDITDRRAGE 387 Score = 56.9 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/196 (10%), Positives = 46/196 (23%), Gaps = 19/196 (9%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVV-DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + + P + AD + V D+ + + + I +I Sbjct: 330 FFKATAGKGPTRSEYRLRRADGSWAWVIDVGQPRFSADGTFLGYVGSVLDITDRRAGEIA 389 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPV---FFIIF 251 + A ++ + V +L L I G Sbjct: 390 QQEAQA-------FIRSIFDSSPDCVRVLDLEGRPLLMNEAGRRIFGLNEDAPITGQTWD 442 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 ++G + +V + E + I A + +L + Sbjct: 443 SIGRASDAHKVEAGWESVRHGKTARFEITVRDAGGEERCMDVIAAPITDNLGKPSRILSI 502 Query: 309 VRIYHRSEWLNRRWHL 324 R ++ + Sbjct: 503 WRDITDAKLASDEISR 518 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 10/139 (7%), Positives = 23/139 (16%), Gaps = 11/139 (7%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFII 250 R E+ +L L + L + G Sbjct: 127 DITELRGIEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKETLGK 186 Query: 251 FT--LGVGKLRYPFLNLT-WAVSTLCLLNYNQNFLQGVETEYSL---AFILAVLISFSVC 304 + + +++ L++ L A V Sbjct: 187 GWAKAVHPQDAGALQDAWRRSLTNGTPLDWEYRLLTMTGEYRWFRARAAAKRDADEKIVR 246 Query: 305 LLYMVRIYHRSEWLNRRWH 323 ++ Sbjct: 247 WYGLLEDVDERRRAADALR 265 >UniRef50_Q21ZG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=Q21ZG9_RHOFD Length = 731 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 103/655 (15%), Positives = 206/655 (31%), Gaps = 37/655 (5%) Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 L R + V + G ++ V + + D + + Sbjct: 65 LLDLPERLLASRPTVQALTRYQRDRGDFGRDAALVEVHARNCVLGVAAGAPDDLPSHYLR 124 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 V + + R + + A E+R V Sbjct: 125 VTPAGRTLEARTQALPEGCMVRTFTDV----TDYVQAQATLQKNEERWKLALESTGDGVW 180 Query: 227 LLLLCTPYEN-----DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY---- 277 + + E I GY V + KL +P + + Sbjct: 181 DWHIQSGVEFYSKRLLEILGYDVGDVHLQARGEFDKLIHPDDMAQLLRARQAHFDGLTST 240 Query: 278 ---NQNFLQGVETEYSLA----FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + + I + ++ + QA D Sbjct: 241 YADEHRVRCKDGSWKWMLSRGMVISRDAQGLPLRMIGTHTDVTERKKSEALIWRQAHFDT 300 Query: 331 LTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L + + +D+ + ++ G + R Sbjct: 301 LTGLPNRHMLRDRVAQEIKKSKRDGLQLAVLFIDLDHFKEVNDTLGHNSGDRLLVEAARR 360 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGA 439 + ++E++ + ++ G E ++L+ L+ ++ + + + Sbjct: 361 ISDCVRESDTVARMGGDEFAVILTELLDASSLERILQKILRALECVFQLDGEQAFVSASI 420 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + ++ L + + +V L N + L Sbjct: 421 GVTMYPLDAGDIEDLFKNADQALYVAKGAGRNR-FSFFTPALQQAAQNRVRLANDLHAGL 479 Query: 500 DQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 L QPI + + ++ G+++P +F+P+ L V Sbjct: 480 IGQQFRLVYQPIVELASGAVCKAEALIRWQHPTRGLISPVEFIPIAEASGLIVAIGEWVF 539 Query: 557 ESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGR-IIRLFKRYHISPQAVILEITEE 614 + + + + SVN P+ Q+ + + + ++++EITE Sbjct: 540 QQAARQVQAWRTALDPDFQISVNKSPVQFYQRGKTKTPWAQQLQAMGLPGNSIVVEITEG 599 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + S + LH G ++++DDFGTGY++ L+R D +KID FV+ ++ + Sbjct: 600 LLLDTSSSVADQLLDLHDAGIQVSLDDFGTGYSSLSYLQRFDIDFVKIDQSFVRYLIPES 659 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D + ++I +A A + V+AE VET QQ+ LL G Y QGYL +P D Sbjct: 660 TDLALCQAIIAMAHALGMKVIAEGVETAQQRDLLAAAGCDYGQGYLFSKPVSAPD 714 >UniRef50_D1RFR0 Response regulator/GGDEF domain/EAL domain protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RFR0_LEGLO Length = 750 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 106/563 (18%), Positives = 206/563 (36%), Gaps = 30/563 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---CTPYENDFIAGYLVPVFFII 250 Q + + +L+ L + F++ + +P + Sbjct: 176 KNLQKTVAEQTKSLQQSLSILRSTFESSTDGILVTDLNYKIIDCNSRFVSMWAIPKAMLE 235 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ---------GVETEYSLAFILAVLISF 301 G+ L + L L LN + + + L Sbjct: 236 INDGLIILYHMLNQLFKPKKYLEELNRLKKNINQISSTVVSFKNGKTLECYSLPHRLYDV 295 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 + ++ L +R QAL DPLT LPN L + + Sbjct: 296 IIGRVWSFHDITERANLEKRLTYQALHDPLTQLPNRALLIDRIRASIDNAQNLKLKFAIL 355 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 +D + ++ + +R I + L+Q+ + L ++ G E +++ + Sbjct: 356 YCDLDRFKLVNDSLSHEVGDTLLRMIGQRWGLLVQDGDILARMGGDEFVMLC-HIDDVDT 414 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + N + + N L + + + ET LL Q+ Sbjct: 415 VYTIANKILNSLKEPFKITNRNLFITTALGISIYPQDGETANDLLKNADLAMYQAKEQGG 474 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKE-GEGYDEILARLK 527 + + + LL + AL+ + L QP +++ + ++ Sbjct: 475 NQ-FSFYDVRLYEHYKQCFLLEAELHNALNNNEFFLAYQPQFNIDQQGLLSVEALIRWNH 533 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQ 586 + G++ P F+P + L +L + + + + +VN+ LLQ Sbjct: 534 PEKGVIFPMDFIPFTEETGLIIPIGEWILREVCRQIDMWHKKNLPYVQVAVNITSRQLLQ 593 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N + Y ++P + EI+E ++ + +Y + QL + G +IA+DDFGTG Sbjct: 594 PNFIDFVKNTLNEYQLNPHHLEFEISENVVITHPD-IIYMLNQLKQLGIKIALDDFGTGN 652 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+L D IKID FV+ I T+ D +I+ +I +A++ + V+AE VE+Q+Q Sbjct: 653 SSINYLKQLHIDCIKIDQSFVQSIPTSHSDGVIIEAIISMARSFNFKVIAEGVESQEQLD 712 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K +QG+L P + Sbjct: 713 FLKKQHCDQVQGFLFSEPLTPKE 735 >UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IP89_XANP2 Length = 758 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 106/568 (18%), Positives = 194/568 (34%), Gaps = 27/568 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 + + + ++ R A A +S Sbjct: 176 AVTRVVGMITDVTAQKQSERHLRLAAAVFASAHDGLVVTDLNAVVS------AVNPAFSQ 229 Query: 239 IAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 I GY R + + A+++ + + + + Sbjct: 230 ITGYCEAEILGRSMRTMHSGRHDREFYRGMWGALTSTGSWHGEIWNRRKNGEIFLQQLSI 289 Query: 296 AVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQE 347 + + + R + A DPLT LPN L Sbjct: 290 RTVFDEKGKPQNYVGAFQDITRIKHSEFELDRIAHYDPLTDLPNRTLLASLLDLAVSRAG 349 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L ID + ++ G + +++ + + + L E +++L Sbjct: 350 KTCAVLFLDIDRFKTVNDSLGHIAGDAVLKAAADRIRAALDADATLGHYGADEFVVILEE 409 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 E + L +R N + +G + + LL + + Sbjct: 410 IEGPQDAALAASRLIDELARPFTINGGEIYLGASVGISLHPLDADDAAQLLQHANTALAE 469 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A + ++ ++ + +R L + + L QP+ + G + Sbjct: 470 AKAQGRG-IYSFYTQALTRSARVRMEMEADLRRGLVREEFRLNFQPVVDLANGRIAGAEA 528 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLM 580 ++ G++ P++F+PL + L VLE + +A +VNL Sbjct: 529 LVRWQSPVHGLVLPNRFIPLAEETGLIEPLGDWVLEEACQQMAKWTAAGADLDFIAVNLS 588 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P + + RI + +R + + +EITE F A ++ + + G RIA+D Sbjct: 589 PRQFQRGTLCERIEEVLRRTGLPAARLEVEITENVLFG-AVAAERKLRDMRDSGVRIALD 647 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR +KID FV D+ DA I +I +A+A L VVAE +E Sbjct: 648 DFGTGYSSLAYLKRFPISKLKIDRSFVHDLPR-AADAEIATAIISIARALGLDVVAEGIE 706 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q A L + G + QGYL GRP Sbjct: 707 APEQCAFLKERGCGFGQGYLFGRPVTSE 734 >UniRef50_B0SAR7 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SAR7_LEPBA Length = 694 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 95/591 (16%), Positives = 208/591 (35%), Gaps = 37/591 (6%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + L + + R + + + ++ + + + Sbjct: 99 VWIIWLLIPLTDSKIILGFDRDVTIQKDISFEFLLQQQ-------KYKSIFDNLPMGIAI 151 Query: 228 LLLCT--------------PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 + + + L + + K+ +L A+ Sbjct: 152 TDEKGKIVETNKTARTYFDIQDGELLNRTLNIRKYTLIQPNGTKIYPRKSSLMRALRHKE 211 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 ++ + + + + + L + + A D LT Sbjct: 212 VIRNLEIGMIKENKITWFDILATPIPIENFGLAVAFLDITQRRHAEEKIAYMAFFDQLTN 271 Query: 334 LPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN +L + +DN + ++ G I+ + + Sbjct: 272 LPNRNSLIDKLFPIFEEARRHGNLVGILAIDLDNFKIINDSRGHDFGDKIIKLVAYRIRE 331 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWG 442 ++ + + + G E +VL E + + + + + Sbjct: 332 SIRVYDLISRQGGDEFTVVLPDLSNERDAAVISESILDAMTHPFVIDGERIFVNISIGIA 391 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + + LL + + E + +++ + N +R A+ + Sbjct: 392 LYPTDGKDSNTLLKNADSALNLAKSQGKN-CYVFFTEELQTVVAERLEIENRMRIAIIEN 450 Query: 503 DLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 L QP + + G + ++ + G+++P+ F+P+ + + V++S Sbjct: 451 QFTLMYQPKIDLYTRKPVGVEALIRWRHPERGLISPNVFIPISEETGMILAIGEWVIKSA 510 Query: 560 LKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 +K + K +VN+ + + I K Y + P + +E+TE Sbjct: 511 IKTMREWKDHGVKDISMAVNISTKQFKHERLISTIAENLKLYKVDPHDLEVELTESSVME 570 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 NA++++ ++++ K G +IAIDDFGTGY++ LK+L +KID FV +I T+ Sbjct: 571 NADAAVRTMQEIRKLGAKIAIDDFGTGYSSLGYLKKLPISSLKIDRSFVSEITTDKDSKT 630 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I+ ++++LA LSVVAE ET++Q LL + GV +QG+ +P D Sbjct: 631 IIHAVSNLAHNLGLSVVAEGAETEEQVRLLAESGVDQIQGFYFAKPMTSED 681 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 109/572 (19%), Positives = 198/572 (34%), Gaps = 31/572 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIA 240 + A K + L V L Y + Sbjct: 142 VLERTRELRETNERLVEYQALLQEKNQFLEALVEGMPNPVFYKTLEGNYIGCNRAFSRLI 201 Query: 241 GYLVPVF------FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 G I+ ++ LT + + + L Sbjct: 202 GRAPEDIVGRSVHEILPQEQACRVEDSGRRLTVQDDDGAGYSCMIDLRDAAGEDRVLVLY 261 Query: 295 LAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--- 348 + + + + + QA D LT LPN L Q E A Sbjct: 262 KSYFRDRTGQRAGEVGTFLDVSELKRKEAQIVHQATHDELTGLPNRMGLRQRMEDHALKG 321 Query: 349 ----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +DN + ++ G + +R++ L+ + + + +L G E +++ Sbjct: 322 GPDARLAVLYLDMDNFKTVNDSLGHAVGDELLRAVAGRLVGMAPRRDMVARLGGDEFVVL 381 Query: 405 LS--GPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L + + R + + L + + LL Sbjct: 382 LPLSAEGDGELAETESARIQDSFTRPFNAADHELYVMPSIGISVAPEDGRDPATLLKNAE 441 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEG 516 ++ + ++ T+++ + +IR L+ + +++ QP I + Sbjct: 442 IAMYRAKEQGGAR-FRRFTQAMNDDVTRRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQV 500 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G + ++ + DG ++ P +F+P+ L +VL + R + Sbjct: 501 TGMEALVRWARPDGTLVPPLEFIPVAEDTGLVVALGERVLRDACIQTRRWTDELGPLRIA 560 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ Q ++ R+ + P + LEITE + +S+ +E+L G Sbjct: 561 VNISARQF-QPDLLDRVQAALAESGLPPSQLELEITETTMMRDLPTSVAILERLAAQGIS 619 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IAIDDFGTG+++ LK D IKID FV+D+ + DA IV +I + + SL+VVA Sbjct: 620 IAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATIVSTIVTMGRNLSLNVVA 679 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET Q L G + +QGY +P P Sbjct: 680 EGVETDDQLGFLRAHGCREVQGYYYSKPLPAD 711 >UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBA9_AZOSB Length = 726 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 117/682 (17%), Positives = 219/682 (32%), Gaps = 44/682 (6%) Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFF 147 + S + L R + L L P G ++ + Sbjct: 34 ALRQSLPRALARNGRKFSESDTVAGAIALLEREPF-DLVLLDYRLPDGTGLAVLDWLAQH 92 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP---HFAQILWRRDI 204 + G+ + L L L R + S + R Sbjct: 93 QREEAVIMISGEDALDAAIGALRGGADDYLRKPYHVAQLQRAVESALHKAALERANRAMS 152 Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKLR 259 E+ L + + L + GY + + Sbjct: 153 QRLRTSERLHRYLVESSPDLIFTLDAEGRFSYLNPRVKALLGY-DRNVLMRRPFTTLVMP 211 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQG------------VETEYSLAFILAVLISFS----- 302 + + ++ ++A + + Sbjct: 212 EDVDRIATLLYAPVAGPGESFHVELRLRRNRELLAGDSPEWITVALTGIPMPAREDGRRG 271 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----QEAG----KSFCC 354 L + R + QA D LT LPN + E Q + Sbjct: 272 GGLYGVARDISERKRAEEIISFQAYHDQLTRLPNRVLFKDRLELAIAQAQRRTGALAVMF 331 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ +G +R I L ++ + L +L G E ++L Sbjct: 332 IDVDRFKLVNDTFGHAEGDMLLRGIAARLAGTLRRGDTLARLGGDEFTVLLPDINGPQDA 391 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + S ++ F + + + L Q Sbjct: 392 EVIARKILDSLSAPFPLSHGDFRATASIGIALFPRDGDGAEDLTRHADIAMYQVKRSGKN 451 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 + ++ ++++L N +RTAL++ + L+ QP + G + +L Sbjct: 452 -GFRFFDIALNSHYRERIVLENDLRTALERREFELHYQPQISLTQHRVVGMEALLRWNHP 510 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 + G+++P F+P+ + L VLE LA R S+NL P + Sbjct: 511 NLGLVSPATFIPVAEEMGLIGDISRWVLEEACGQLARWREAGHNDLRMSLNLSPHDFDSQ 570 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + +R+ + P + LEITE +A + L + G +AIDDFGTGY+ Sbjct: 571 DVVTMVTECVERHRLPPSQLELEITESMMMQDAAGVAAKVRGLREAGLSVAIDDFGTGYS 630 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 L++ +KID FV+++ I+ +IT +A+ L ++AE VE +Q Sbjct: 631 ALAYLQKFPVSTLKIDRSFVREL-EGPNTNPIISAITGIARGFGLQLIAEGVERSEQAET 689 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L LG +QG+L RP P A+ Sbjct: 690 LRTLGCDVMQGFLYARPAPAAE 711 >UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=B1M4V3_METRJ Length = 777 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 120/738 (16%), Positives = 238/738 (32%), Gaps = 41/738 (5%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHL 81 V L + I + ++L W P + V Sbjct: 31 VALRLVPFTILVSLSVVQVIVYLFWNPANRAYLAGLETLILPLAVVSLQQCWRWRSRPKP 90 Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY 141 + ++ + G + + R + + T + Sbjct: 91 LQVPSSFVQGVVLAAQAYGFLLASIPVMLFSGADAHGRLLIASSIAGLIATGMSAAVLPR 150 Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF--YYLTRMIVSPHFAQIL 199 + + + + +F A +++ + F +L+R++ AQI Sbjct: 151 VAIGYSGLII-LGSFIALATTGEAFYIYVAVLLFFYAIFICFTILHLSRLLTMRVIAQIE 209 Query: 200 WRRDIA-----PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 R + +E + L A L +AG + Sbjct: 210 LERQQEFTHLLLNEFEESASDWLWETDADLRLQH---VSPRLIEVAGSSERQLMGLPLER 266 Query: 255 VGKLR------YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 + + L ++ L + + Sbjct: 267 LLLPPVAPPRSHSSTTLWSCIAERRAFRNLHLQLDIAGERRTWCLSGKPTFDRAGAFSGY 326 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE-------QAPEQEAGKSFCCLRID 358 + R AL D LT LPN + Q + L +D Sbjct: 327 RGVGSDVTEKRRSEERLSYLALHDSLTDLPNRVLFHQLQEAARERLAQGDRFAVLALDLD 386 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG--PETEGRLQH 416 + ++ +G ++S+ L + +L +L G E ++ +G ++ Sbjct: 387 EFKSVNDTFGHAAGDKLLKSVAERLRSFEASDVQLARLAGDEFAVLATGRSARDLHAIEA 446 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + N + + + L + + Q ++ + + + Sbjct: 447 LANGIVEALASPFTIDGIRLTVSVSIGIAIAPQDGC--QEIMRRADLALYRMKSEGRN-G 503 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 E + + + L +R ALD+ + +LY QPI G++ ++ Sbjct: 504 YRFYEAEMDERIEARRALTADLRGALDRDEFVLYFQPIVAAKECRVRGFEALIRWKHPVR 563 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G ++P +F+PL + + +L + A P R +VNL P ++ Sbjct: 564 GFVSPGEFIPLAEETGVIIPLGEWILREACRIAAGWPG---DVRIAVNLSPRQFRHSDLT 620 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + ++ + LE+TE + + +L + G R+++DDFGTGY++ Sbjct: 621 QLVRSALRTSGLAAARLELEVTESVFLEATPAINATLSKLREMGVRLSLDDFGTGYSSLS 680 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+R+ D IKID FV+D+ A IV +I D+A + +++ AE VET Q+A L + Sbjct: 681 YLRRIAFDKIKIDQSFVRDLPQERGAAAIVSAIIDMATSLDMTITAEGVETDAQRACLLE 740 Query: 711 LGVQYLQGYLIGRPQPLA 728 G QGYL +P P Sbjct: 741 QGCHEFQGYLFSKPLPAE 758 >UniRef50_Q2RTE0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTE0_RHORT Length = 886 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 117/702 (16%), Positives = 227/702 (32%), Gaps = 46/702 (6%) Query: 47 MPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRW 106 + L +L+I R ++ G + + Sbjct: 186 VARAFGLPLLWIGVPRPEGLLVVGKGGSEAARLSAYPEGRGDEGTQGVAGRTLRSGRAQS 245 Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFP-LKISTFFGDADAIFT 165 T + G+ + G L+ Sbjct: 246 DDAGEGWAAPT--------WAPGVPLGRAYCVGLRARGEVVAVLCLRGHGEAPSPALSRA 297 Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + L + + Y + ++ A I + E R ++ Sbjct: 298 LEAL-----GPRLGEAIVYERGQSLMRLQSAAIAAAANAIVITDGEGRVEWVNE------ 346 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 L + YE D I G G + + + + Sbjct: 347 -AYHLLSGYERDQIIGT-----LPAVLAGPSAANPTAIEAWPTLRAGQVWRGEIHETHRD 400 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 Y + + ++ S L+ + + R + D LT LPN Sbjct: 401 GRTYIVDKTITPIVDASGRLSHLVAVDEDVTARKKAEERIRYLSNYDTLTRLPNRVLFRD 460 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 G + + +D ++ G H + +I + +E + + Sbjct: 461 RLYQAVVQARRGHGGLAVMFIDLDQFSLVNDTLGHAAGDHLLMTIASRINAAAEEADTVA 520 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E L+ + + + L + + +G + + Sbjct: 521 RVGGDEFALIQTALTSADSAASLARRLIDVIRTPVDLGGREVVIGANVGIAIYPQDGTDP 580 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ-GDLLLYAQP 510 L+ ++ ++ + ++ L +R ALD L L+ Q Sbjct: 581 DNLMKNADMAMYRAVKSGDDSC-CFFSNEMNAEAAVRLSLEEDLRRALDSGDQLFLHYQL 639 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + + G + P +F+P+ L VL + L A Sbjct: 640 QFCIESGRPVGAEALARWTHPTLGAIPPTRFIPVAEDSGLILALGDWVLGTALAEYARWR 699 Query: 568 CDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 G +VN+ + QK + R+ L ++ + P+ + LE+TE +A+ ++ Sbjct: 700 AAGCGRLTIAVNMSAVQFRQKGLVERVTDLLAQHGVPPEDLELELTESMLMQDADQAVAQ 759 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L + G R++IDDFGTGY++ LK + D +K+D FV+D+ + DA+I R+I +L Sbjct: 760 LTALSQAGIRLSIDDFGTGYSSLGYLKLFRVDKLKVDQSFVRDVTEDGNDAVIARAIINL 819 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L V+AE VET +Q A L + G +QGYL+ P+P Sbjct: 820 GHSLGLEVIAEGVETPEQMAYLRREGCDVVQGYLMAYPEPGE 861 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 108/568 (19%), Positives = 206/568 (36%), Gaps = 32/568 (5%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL----LLLCTPYENDFIAGYLVPV- 246 + + A + L V+ L+ + + G+ Sbjct: 230 EIGRLALQMDKMRADLKTSFAEQRAILTNIELGVIFERGGLIQLASRQAERSFGHPPGFM 289 Query: 247 ----FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--S 300 I+ + + + +++ + L Sbjct: 290 SGLPILAIYPEDARAGIASARAMAAIATGDGRHEEELMLHRRDGSQFWAHLRVRQLDPAQ 349 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 ++++ + + + A DPLT LPN R L + Sbjct: 350 PQAGCIWVIEDISARKAVEDEVNRLAFYDPLTQLPNRRLLRDRLAQALAASARSGMHGAL 409 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-- 410 + +DN + ++ G ++ + + L ++E++ + +L G E ++++ Sbjct: 410 IFIDLDNFKSLNDTLGHARGDQLLKLVGQRLTHCVRESDTVARLGGDEFVVIVQDLGARL 469 Query: 411 ---EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + + F +++++ LL + Q Sbjct: 470 DECATQAEGVGEKILDALNQPYPLDGHVRHSTPSIGITLFADDRDSVDDLLKEADMAMYQ 529 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEI 522 + L + + ++ L +R ++ LL+ QP + G + + Sbjct: 530 AKTAGRN-TLRFFDADMQAMLVQRAALEEDMRESMRLSHFLLHYQPQVVGSGRITGAEVL 588 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLM 580 L G++ P +F+PL NL VLE+ K LA D K SVN+ Sbjct: 589 LRWPHPLRGLVPPAEFIPLAEDTNLITALGHWVLETACKTLADWSAQDDMKHLSVSVNVS 648 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 Q + ++ + +R P + LE+TE + E + + L G ++D Sbjct: 649 ARQFRQPHFVAEVMSILERTGADPHLLKLELTESLLVEDVEDIVAKMSALKSRGVGFSLD 708 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKRL D +KID FV+DI+T+ D I R + LA + L+V+AE VE Sbjct: 709 DFGTGYSSLAHLKRLPLDQLKIDQSFVRDILTDPNDLAIGRMVVALADSLGLTVIAEGVE 768 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ LL ++G QGYL RP P Sbjct: 769 LAAQRELLAQIGCDAYQGYLFSRPLPRE 796 >UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F6T4_ACIAD Length = 676 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 119/623 (19%), Positives = 237/623 (38%), Gaps = 33/623 (5%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA-VLIYNMLFYYLTRMIVSPHF 195 C + + + T + ++F A + + + Sbjct: 54 WCKHIQPLLAPALEGHAAQISWQSPFLDTFISYKTVFVAPQYSIDQRIDGILISVFELTE 113 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSV---LLLLLCTPYENDFIAGYLVPVFFI--- 249 + ++ E + + +++ ++ + I+ Y Sbjct: 114 QLSIHQQLEKILKDFENYKLAIDAHSIVAITDNRGVITHVNEKFCDISQYEYYELVGTTH 173 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 R F + ++ + Y + + L + Sbjct: 174 KIINSGFHPRSFFKQMWKTIAQGNIWKGEICNRTKQGKLYWVDTTIVPLKDNDGLLKNYI 233 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + + AL D LT LPN R ++ E + + + +D Sbjct: 234 SIRTDITQLKSSEDHAKYMALYDELTGLPNRRYVKDRLKKVIELSKESQHHSAILMMDLD 293 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-------- 410 N + ++ G + ++ + + ++E E + +L G ELL++LS Sbjct: 294 NFKTVNDTLGHDYGDNLLKMVANRVKKCVRETETIARLGGDELLIILSNLSENEEIAQAQ 353 Query: 411 -EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + N + + + N + F+ LL Q+ A+ Sbjct: 354 AQAIAERISNSIY-QPFNLENQVIQTSVSIGIFVFNDASIPQNELLKYADMALYQAKANG 412 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLK 527 + + + ++ + LL+ +R AL + + LY QPI ++ + GY+ +L + Sbjct: 413 KN-CICTFDPLMEQNVISRASLLSDLRQALIRDEFELYYQPIVDQHKKIIGYEALLRWIH 471 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLL 585 G++ P +F+ + +L +VL + L D SVN+ Sbjct: 472 PVRGLILPGEFIEQAEKSDLIHLIGNRVLMMACQQLYQWSQNTDSAHWTLSVNISVQQFR 531 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + + II++ + +P + LE+TE +++ +SS+ +++L + G R ++DDFGTG Sbjct: 532 KSDFEENIIQIIQDSKANPYRLRLELTESMFYTDMQSSIEKMKKLIEIGVRFSMDDFGTG 591 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK L D +KID FVK++V N+ D IV +I +LA L+VVAE VET++Q Sbjct: 592 YSSLNYLKLLPLDQLKIDRSFVKNMVDNSRDIAIVNTIINLAHILDLNVVAEGVETEEQF 651 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L + QGYL GRP P+ Sbjct: 652 ICLTQNQCFTFQGYLFGRPLPID 674 >UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ56_DESAC Length = 928 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 106/567 (18%), Positives = 206/567 (36%), Gaps = 29/567 (5%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 + L + + + R + + + L GY Sbjct: 361 FGLFLDVTERNKFEQQNHRLLQAIDQSP---ICILMTTCDGRPVYL---NQFFKEKTGYS 414 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTL---CLLNYNQNFLQGVETEYSLAFILAVL-- 298 + ++ + + ++++ Sbjct: 415 LDECSHPDNPIYQFIQQRIPAQCGSNDGRNYDEPWLEELEIRSKDGGIHWERISISLVYD 474 Query: 299 -ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------ 351 L+ + + + + A D LT L N L +Q K+ Sbjct: 475 LKGQCSHLIVIGEDITEEKKNAQHFEFLATHDSLTGLANRLLLHDRLDQAILKAKRVHGT 534 Query: 352 --FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 L +D + ++ G ++ I LL +++E++ + +L G E +++LS E Sbjct: 535 VFLILLDVDRFKMINDSMGHDNGDRLLQLIADRLLKVVRESDTVVRLGGDEFVVLLSEVE 594 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 T + S + + + A + + + LL ++ Sbjct: 595 TLDDALCAAEAIHRELSEPFTVSERQIPLTVSAGICSYPDHGMSSLELLRHADVAMYKAK 654 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEIL 523 H E + G + + L +R A+ + +L +Y QP + + G++ +L Sbjct: 655 ETH--SQTCIFESSMDGLVLESLELEAELRQAIVKNELHVYYQPKVDAGSEKIVGFEALL 712 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPL 582 + D G+++P F+PL Q L L V+E + + L +VNL Sbjct: 713 RWVHSDRGMISPGVFIPLAEQTGLIHEIGLWVIEDVCRQLRQWADQDYAIVPVAVNLSAK 772 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 ++A ++ + YHI E+TE N SS+ +++L G R+A+DDF Sbjct: 773 QFQSVDLAKQVATILDSYHIDSSWFEFELTESMIMQNPLSSIRIMKELKDLGLRLAVDDF 832 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L+RL D +KID F+ D+ + + SI +A++ + +AE VET Sbjct: 833 GTGYSSLNYLRRLPLDYLKIDRSFIDDVTQDLSADAVATSIIGIARSLGMQTIAEGVETA 892 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L ++QG+ RP P+ D Sbjct: 893 EQLMFLKDNNCDFIQGFYFYRPMPVDD 919 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 12/195 (6%), Positives = 39/195 (20%), Gaps = 19/195 (9%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 + +S + + L++ + L + Sbjct: 189 VRGGVSVSIPLAPYREAQLNLFRKDMTHHALLWALGVAGLLFLRHLVQSRLRREDEVQQE 248 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTP--------------YENDFIAGYLVPVFFIIFT 252 E++ L + + + + + + + G + F Sbjct: 249 IALSEEKYRALFRDSLIGIAIADCTSGRIIECNKKLAHLVERTPEELIGKPQDILHPKFE 308 Query: 253 LGVGK-LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVR 310 G + F L +Y + + + + + Sbjct: 309 KDQGSAVTQTFKKHQDEAHGEVLGSY---LITKSGQLKDVEIQGGTVSFGNQNYQFGLFL 365 Query: 311 IYHRSEWLNRRWHLQ 325 ++ H Sbjct: 366 DVTERNKFEQQNHRL 380 >UniRef50_C6BS66 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS66_DESAD Length = 1040 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 96/552 (17%), Positives = 207/552 (37%), Gaps = 26/552 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + R L + ++ L + T + + GY Sbjct: 470 AERKIFRHKSRFMQLFESSPQAIALTDSKGNVVDTNRAFNKLFGYSTEEMAPCCENLSPT 529 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRS 315 + ++ + + + + Sbjct: 530 NTGKIRANLKKILGGETYRTEDMRRHKNGRLIPVSILGYPFLYNEEISGTFIIYDDISQR 589 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRH 366 + RR Q+L D LT LPN + E+ E + L ID + ++ Sbjct: 590 KEYERRLSYQSLHDSLTGLPNRTFFLERLEETLDMSRKIPERTFAVLMLDIDMFKRINDS 649 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NS 423 G + + + + ++ + + ++ G E +++ T + ++ + Sbjct: 650 LGHQAGDELLIEVGKRIKCCLRPVDTVARMGGDEFAVLIEDFSTPQMVIQIIRDIRNEIR 709 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + ++ + + + E + ++ ++ + + Sbjct: 710 KPMSISSREVVISSSIGIVFKTSSYEHPEHIIRDADISMYKAKEQGVNK-FKVFNKTMHE 768 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLP 540 + + +L+ IR + + + Y QP+ + + G++ ++ + G +TPD+ +P Sbjct: 769 KALQSLLIETEIRQGIPENEFFPYFQPVYSMQNRNLAGFEALVRWNHPERGFLTPDQIIP 828 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLF 597 + + L D +L ++++ +VNL P L + ++A I + Sbjct: 829 VAEETGLIVELDRIILFEACRFMSAWIRLYPNANDLFLTVNLSPSQLSKPDLAEAIETIV 888 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + I + LEITE +S N++++ + G R+A+DDFGTGY++ +L+R A Sbjct: 889 QETKIPADNLKLEITESAIMERNAASSLNLKKIGEMGIRLAVDDFGTGYSSLAQLQRFPA 948 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +KID FV + ++ IVR++ L + S+ V+AE VET++Q LL +G Y+Q Sbjct: 949 STVKIDRSFVSHMASDHESLEIVRAVNALGHSLSMDVIAEGVETREQLILLKDIGCDYVQ 1008 Query: 718 GYLIGRPQPLAD 729 GY +PQ D Sbjct: 1009 GYYFDKPQTNED 1020 >UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJP5_9GAMM Length = 1092 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 115/725 (15%), Positives = 227/725 (31%), Gaps = 35/725 (4%) Query: 37 IHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFV 96 + S I L + + LF++ L + L + + Sbjct: 355 VASLAIAPRQQALWMGAATLFVWLIMLAAGGLLWRQQWLRQHLVLMHSHAEQDRLLRLYF 414 Query: 97 VLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTF 156 + + G R + + + + PL + Sbjct: 415 DMPFLGMAISYPGGRGWERVNPFLAQMLGYSPEELVRTDWDRLAVPEDRSCEAPLDAAMQ 474 Query: 157 FGDADAIF---TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR 213 G+ D ++ I I + + + Sbjct: 475 AGERDGYSIEKRLLRRDGRVLVADIDVKCTRTADGAIDRVVATIEDI-TERREQEERRRL 533 Query: 214 AFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNL 265 A + V++ +L + GY + + N+ Sbjct: 534 ASVVFENTREGVVITDATAHILSVNRAFTELMGYTQDEVVGRTPKMFQSGRHDQAFYANM 593 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRW 322 + T + + + + + + R + Sbjct: 594 RRQLETEGHWQGEIWNRRKTGEIFPELQSITAVRDDQGRLTHYVSVFADISRLKASEAEL 653 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A DPLT LPN R L + + + +D + ++ G Sbjct: 654 DFLAHHDPLTELPNRRLLRARLAQAIALMRRRNGLLAILIIDVDRFKDINDSRGHAAGDR 713 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW-NN 430 ++ + L + + + +L E ++ + + + + Sbjct: 714 LLKIVADRLQAGQRGTDTVARLASDEFAVLADNLAHVDDAALVAEDILREVGRPVDLGDG 773 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 ++ F + + LL Q ++ + + +++ Sbjct: 774 VEFEIAATIGIAVFPDHGADAETLLQQAGTALSRAKEDGRG-GYRYYSDAFTEAARERID 832 Query: 491 LLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L +R A++Q L ++ QP + G + +L + G ++P +F+P+ Q L Sbjct: 833 LNARLRRAIEQDSLEVHYQPQYRVSDGVLIGAEALLRWTDPELGPVSPGRFIPVAEQTGL 892 Query: 548 SARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VL +L R +VN+ L + I ++ L + + + Sbjct: 893 IVELGDWVLRRVLAQGQAWRDAGYPAVRLAVNVSALQFQRVAIDHQVADLLEGHGYPAKY 952 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE S+ E + +++L + G A+DDFGTGY++ +LKR D +K+D F Sbjct: 953 LELEITESALMSDPERARRILQRLRERGVSFAVDDFGTGYSSMAQLKRFPVDTLKVDKSF 1012 Query: 667 VKDI---VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 V + + D I R+I L LSV+AE VET++Q L +LG + QGYL R Sbjct: 1013 VDGLAAGAHDADDRSIARAIVALGHGLGLSVLAEGVETREQLGALRELGCDHYQGYLASR 1072 Query: 724 PQPLA 728 P P Sbjct: 1073 PLPAE 1077 >UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Geobacter RepID=C6DZH0_GEOSM Length = 853 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 102/565 (18%), Positives = 202/565 (35%), Gaps = 33/565 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVL--------LLLLCTPYENDFIAGYLVPV 246 + + L E++ T+ V + + + I GY Sbjct: 266 RDISIRKNAEQALLSSEEQCRTIVSNINEYVYSVRFEEGDITSVYHSPKCFDITGYTPEE 325 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTL-----CLLNYNQNFLQGVETEYSLAFILAVLISF 301 ++ L + NL + + + AV Sbjct: 326 YYRDPLLWFTMIHEEDRNLVVEFLNGIFAGLDHEPIRHRIIHKDGSVRWIVNNCAVQRQR 385 Query: 302 SVCLLYMVR------IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------E 347 L + R + A DPLT LPN L + EQ Sbjct: 386 RGDRLSITRLDGFILDVTDIKRAEENIFFLAHHDPLTKLPNRSTLYERMEQVICAAQKSS 445 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L ID + ++ G + ++S+ + L + + + +L G E +++L Sbjct: 446 RNVALLFLDIDGFKQINDSMGHDVGDRLLQSVAKRLSDCTRSCDVVSRLGGDEFVVMLWD 505 Query: 408 PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + + + F + LL + Sbjct: 506 CGEAET-TVVAEKVINAGFPVLGSNVTVTPSIGISIFPDDGRDYLTLLKHADIAMYHAKK 564 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 ++ ++ +L +R ALD+ + +LY QP + + G + ++ Sbjct: 565 SGGN-NFQFFTHKLNEIAHERFMLEAELRRALDREEFVLYYQPKVDLSTGKFSGMEALIR 623 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 G+M P+ F+ + + L + ++ ++ + + +VNL Sbjct: 624 WQHPAHGLMLPESFIGIAEESGLLTQISKWIIPTVCRQIQQWQQQGINSVSAAVNLSASF 683 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + I + I+P+ + LE+TE S+ + + ++ + G +++IDDFG Sbjct: 684 FQHPDFEETIEESLLQTGIAPECLELELTEATIMSDPQRVLGSMAAMKALGLQLSIDDFG 743 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+L D +KID F+ +I + +A +VR++ + ++ L V+AE VE Sbjct: 744 TGYSSLSYLKKLPVDKLKIDQSFIHNIARDADNAAVVRAVISIGRSMQLRVIAEGVENAS 803 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q A L G + QGY RP P+A Sbjct: 804 QLAWLQAEGSEEAQGYYFSRPLPVA 828 Score = 52.3 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 8/139 (5%), Positives = 29/139 (20%), Gaps = 10/139 (7%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC------TPYENDFIAGYLVPVF 247 ++ E R L A ++++ + G Sbjct: 140 VLDITKRKQSELALQRSEARYRRLFETAKDGIMIVEADSGAIAEVNPFLVDMLGCRRDEL 199 Query: 248 FIIFTLGVGKLRYPF--LNLTWAVSTLCLLNY-NQNFLQGVETEYSLAFILAVLISFSVC 304 + + A+ + + + + + S Sbjct: 200 LGKTVWELHFFAHVVPGAADFKAMQQKEFFHGDDLQLATVRGRDIPVEVVSNCYQSEQSS 259 Query: 305 LL-YMVRIYHRSEWLNRRW 322 ++ + +R + + Sbjct: 260 VVQFNIRDISIRKNAEQAL 278 >UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BRL9_DELAS Length = 881 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 116/705 (16%), Positives = 218/705 (30%), Gaps = 41/705 (5%) Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTF---------VVLCACAILRWQL 108 + W V ++ L + Q V R+ L Sbjct: 158 VRDWAQWGVVAVNGLAVSVLAETLQRSLRKANMQRQLLDSVISGTSDAVFVKDLRGRYLL 217 Query: 109 GTRWRYGLTSRYVWQRL----FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF 164 R L R + F L + + Sbjct: 218 VNRAAASLVGRQAEDIVGKDDFALFPFGIASAIRRKDQAVLRQEVATHEEQLTVEPGRTL 277 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 ++ + + ++R I + + + + Sbjct: 278 DLLVTKGPVRNTAGHIAGLFGISRDITERKRFERELAQAAVVFDSSHQGIMVVD------ 331 Query: 225 VLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + I GY + + + + Sbjct: 332 PGRRITRVNPAFTRITGYASEDVIGKTPRVLSSGLHGPEFYRQIWACIERDGFWHGEIWN 391 Query: 282 LQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + ++ ++ + + + D LT LPN R Sbjct: 392 RRKTGEIFAEMLSISAAQGAGGEIEHYIGVFTDISHIKAHEAELERVTHYDLLTGLPNRR 451 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L + + C L +D + ++ +G + + L +++ Sbjct: 452 LLIDRLNQAMLRTAREGRSLAVCFLDLDGFKEINDLHGAAAGDALLVGVAAHLKSVLRSE 511 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGN 447 + L +L G E +L+LS + +++ + SR + + L + + + Sbjct: 512 DTLARLGGDEFVLLLSHIGSAEHCATILDRVLEAASRPVPVQDRVLSVTASLGVSLYPDD 571 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 Q LL + + + + L L +R AL++G+ LL+ Sbjct: 572 QADPDLLLRHADQAMCVAKQAGRNR-YQLFDPENDRKAHARRLQLGWLRQALEKGEFLLH 630 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP G + +L G+ P +FLP +A +L V+ + A Sbjct: 631 YQPKVELGGGRLVGAEALLRWHDPRQGLRAPGEFLPFVAGSDLERPLGDWVIGEAVAQAA 690 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESS 623 S+N+ LL ++ ++ R+ + P + LEI E A ++ E + Sbjct: 691 RWFGQGLDLCVSINVSANQLLDGGFHAKMAQVLARHPDLPPHLIELEILESAAIADMEQA 750 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + Q + G R A+DDFGTGY++ L++L +KID FV+D++ + D IV + Sbjct: 751 IQVMGQCRQLGIRFALDDFGTGYSSLTYLRKLPVQSLKIDQSFVRDMLADPDDLGIVEGV 810 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA L VAE VET + L +G QGY I RP P Sbjct: 811 IQLASTFQLESVAEGVETPKHARRLRDMGCHVAQGYGIARPMPAD 855 >UniRef50_A8FY98 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FY98_SHESH Length = 951 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 108/583 (18%), Positives = 203/583 (34%), Gaps = 28/583 (4%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + V + L I A++ + + + ++ V++ Sbjct: 355 WYSTPIVGVNGEVIGVTSLILDITESKQAELKLKHAASVFTHTNQG---ITITDTSGVII 411 Query: 228 LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 I GY + + + + Sbjct: 412 ---EVNDAFSAITGYARDEVIGQNPRVLQSGRHSPEFYREMWATLQADGHWTGEIWNKRK 468 Query: 285 VETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + Y ++ ++ + + + + + A D LT LPN L Sbjct: 469 NDEIYPEMLTISAVLDATGKVQNYVALFNDITAIKEHQEQLERIAHYDTLTNLPNRTLLA 528 Query: 342 QAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 +++ + L +D + ++ YG + + I R L +++ + L Sbjct: 529 DRLTQSMVQVRRRKSSLAVVFLDLDKFKDVNDAYGHDVGDKLLIVISRRLKEALRDIDTL 588 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQET 450 ++ G E + VL E + ++ L + L + + + Sbjct: 589 ARIGGDEFVAVLMDIEKGEDCEPVLERLLEAASGSVTVEGIMLKVSASMGVAIYPQDGID 648 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 LL + + + + L ++R ALDQ + +LY QP Sbjct: 649 ADQLLRHADQAMYVAKHEGKN-CYHLFDTAQNIAMQIRHDDLQSMRKALDQSEFVLYYQP 707 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 N G + ++ L + G++ P++FLP I +S V+++ L +A Sbjct: 708 KVNMRTGAIIGAEALIRWLSPERGLVGPNEFLPAIENHVISIEVGEWVIDTALGQIAAWQ 767 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYN 626 SVN+ L L + L + + ++P ++ +E+ E + Sbjct: 768 ELGLDIPVSVNVSALQLQHDGFVTCLAALLEAHPEVAPSSLEIEVLETSLIDDVMQVSAT 827 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + + G A+DDFGTGY++ L+RL A +IKID FV D++T D IV + L Sbjct: 828 MLACIELGVTFALDDFGTGYSSLTYLRRLPASLIKIDQTFVLDMLTTPDDLAIVEGVVSL 887 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AK+ V+AE VET L + G + QGY I RP D Sbjct: 888 AKSFKHKVIAEGVETIAHGTTLLQTGCELAQGYGIARPMMAKD 930 Score = 81.2 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 28/260 (10%), Positives = 68/260 (26%), Gaps = 22/260 (8%) Query: 89 MLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFD 148 + + +VV+ +L +L G SR V L L + I S+Y F Sbjct: 13 WVLATLWVVIIGVYLL--KLRQLRAEGAVSRTVTVLLIILAIDAFRTIVESVYFGLYFNS 70 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR----MIVSPHFAQILWRRDI 204 I D + ++ + L ++ + R I A + Sbjct: 71 LYGLIPKSIADLLSQPALLIIPKLINIFAGVLVILLLIKRWVPRDIHERKEALLALHAAK 130 Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + S+ E ++ + + ++ + + GY + + + Sbjct: 131 SASVNNENLFNSIFNGVTDACIFADSNRNIVSINQGFELMMGYGIDELEGKTASIIYESD 190 Query: 260 YPFLN----LTWAVSTLCLLNYNQNFLQGVETEYSLAFI---LAVLISFSVCLLYMVRIY 312 + + + Y N+ + + L + + +R Sbjct: 191 EEYERQGRIHFNLAAKEKVTPYEANYRHKDGSIIVGETSRIVIRTLDDQILGYVGFIRDV 250 Query: 313 HRSEWLNRRWHL----QALT 328 + + Sbjct: 251 TDRKKATTALQESTAMLSHH 270 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 10/162 (6%), Positives = 35/162 (21%), Gaps = 9/162 (5%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + + + + R + A + A + ++ + Sbjct: 232 VIRTLDDQILGYVGFIRDVTDRKKATTALQESTAMLSHHVQNTPLGCISWDSNLNCIEW- 290 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL----NYNQNFLQGVET 287 + I GY L + ++ L + + Sbjct: 291 -NKSAEKIFGYSPDEVIGHALLEILVSEEIRDDINNIGKILFKGNKCTRSSNENITKDGR 349 Query: 288 EYSLAFILAVLISFSVCLLYMVR---IYHRSEWLNRRWHLQA 326 + ++ + ++ + S+ + A Sbjct: 350 TIICEWYSTPIVGVNGEVIGVTSLILDITESKQAELKLKHAA 391 >UniRef50_B9ZNJ0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gammaproteobacteria RepID=B9ZNJ0_9GAMM Length = 706 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 115/623 (18%), Positives = 220/623 (35%), Gaps = 32/623 (5%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + IS D + D S + R + Sbjct: 71 VLRFIQAAGLAVPVVVISGNTSVDDVAGALRDGASDYLKKPYQPDELLATVRNALHKKDL 130 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFF--- 248 + R A E+ + + V +L + GY Sbjct: 131 EDANRHMRARLERSERLHRLIVNNSPDIVFILDRDGRFRFVNSRVHELLGYSRQDLLDTR 190 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ----NFLQGVETEYSLAFILAVLISF 301 ++ T K Y F + + + + E ++ A + Sbjct: 191 VLDLVETDDHEKAEYFFEQAGRSHAHIRSVELALKPREMARTRRYFEVAVWPTAASDDTG 250 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + R + + QA D LT LPN Q + Sbjct: 251 ETLVYGTARDITDRKESEAFINFQAYHDLLTRLPNRALFRDRVDVAIAQAQRQGHPLAVM 310 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + ++ + ++ G + ++++ + LL +++ + L + G E L+L + Sbjct: 311 FIDLNRFKVINDSLGHTIGDRLLQAVAQRLLGCIRKGDTLSRFGGDEFTLLLPQISRQEA 370 Query: 414 LQHMVNILNS---RQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + H L +G + +TL+ L+ + Sbjct: 371 AVDVAEKILESLNEPFHLGGDHELYVGASIGIAIYPEGGDTLETLIRHADIAMYREKNTG 430 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARL 526 + + G T ++ L +R AL++ + + QP + + G + ++ Sbjct: 431 KN-GIRLFAPEMHGNTPHRLQLEQDLRKALEREEFHILYQPQVDGETGQLLGVEALVRWN 489 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 D G++ P +F+P+ L D L + L + R +VNL P+ + + Sbjct: 490 HPDRGMLGPAEFIPVAEDTRLIVDLDRATLRNALGDIRKAHQHVPNLRLAVNLSPVLIER 549 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + ++ L + + +EITE S+ ++ + +L + G ++A+DDFGTGY Sbjct: 550 DDFVDGVLGLLVETGFPAELLEIEITESLLMSDTHDTVAKLNRLCEAGVQVAVDDFGTGY 609 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L++L +KID F I T+ A IV +I +A+ +++VAE VET QQ Sbjct: 610 SSLSYLQKLPVHTLKIDRSFTLTICTDGE-ACIVNAIVSMARGLQMNIVAEGVETAAQQE 668 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L +LG +QG+L G P PLAD Sbjct: 669 YLRRLGCPMMQGFLFGHPSPLAD 691 >UniRef50_Q2BQ15 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ15_9GAMM Length = 594 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 95/578 (16%), Positives = 183/578 (31%), Gaps = 52/578 (8%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVP 245 I + E R A + L G Sbjct: 13 ALLKQRVIGLSKAEKVLRETEARYALAMQGANEGLWDWDPVSKELYLSARLLRTIGMGKD 72 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAVLI 299 F + + V + L Sbjct: 73 TFKTTSNEWLSWVHEEDREHYQQVLCHHLKGETEYFRCEYRVQNSSGGYVWVLAHGMALR 132 Query: 300 SFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + ++ + + + QA D LT LPN + Sbjct: 133 NDQNIAYRMVGSIGDITEQKEYQDKLLHQATYDHLTGLPNRALALDRLSVAISRSRRNKT 192 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + +DN + ++ G + ++ I L +E + + +L G E L++L Sbjct: 193 SVGLLFVDLDNFKKINDTLGHEVGDLHLKEISNRLGYCFREEDTIARLGGDEFLVILPDL 252 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 ++ +++ + + + + + N + + LL Q+ Sbjct: 253 DSPKQVEEVCERILATAMQPVTINGYEFSTSASIGVTIYPDDGYEPSGLLRNADAAMYQA 312 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 A + +T ++ + + +R AL + L L+ Q I + + G + + Sbjct: 313 KAQGKD-TFCFFTPEMDQETVRKFTMESYLRQALSKDQLSLHYQSIVSASSGDVVGAEAL 371 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMP 581 L + G + PD+F+PL + L VLE+ A + +VN+ Sbjct: 372 LRWHCPEYGQVPPDQFIPLAEESGLIVTIGDWVLETACLQAAEWMATACVPFKIAVNVSY 431 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS-----------NAESSMYNIEQL 630 +I + ++ K+ + Q + +++L Sbjct: 432 PQFRDGHIVSTVEKVLKKSGLPAQC-----------LELELTERLLMEDERGCAEALKKL 480 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G +++IDDFGTG++ L+R + +KID FV ++ + ++ +I +A A Sbjct: 481 SAMGVQLSIDDFGTGFSALNYLQRFPVNTLKIDRSFVAELDCSKESPALISAIIQMAHAL 540 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VV E VET+QQ L YLQGY RP P Sbjct: 541 GIEVVGEGVETRQQVNFLTLQTCDYLQGYHFARPVPAD 578 >UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V32_COLP3 Length = 682 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 94/542 (17%), Positives = 190/542 (35%), Gaps = 27/542 (4%) Query: 214 AFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNL 265 + ++++ I GY + +Y + Sbjct: 118 IEQIFDHTNEAIIVTDNQGLIQTVNKSFSNITGYSEEEVIGKTPAILNSGKQDKYFYKKF 177 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRW 322 + + Y ++ + + + + Sbjct: 178 WQQIIDQGSWQGEIWNKRKNGEVYPEWLNISSIRNKESQISNYICQFTDITNRKKSEEEL 237 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 H A D LT LPN L + EQ + +D + ++ G + Sbjct: 238 HFHAYHDSLTSLPNRHLLFEKLNHLCVLHQEQPTYFAVLFCDLDRFKMINDSLGHDVGDE 297 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT 431 ++S+ +++N+ + + G E ++V+ G + L + + S Sbjct: 298 LLKSVANRFEAKLRDNDIIARTGGDEFIVVIEGEKALKNLDKICLQILSLFEVPFQTKYG 357 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 +F + E ++ L+ + + +++ L Sbjct: 358 EFKTTISIGVSQFPSDSEDVRELISFADVAMYKIKKSGGNH-YSFFDVKEKALIQQRLEL 416 Query: 492 LNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 + I A+++ ++ QP N E G + ++ + G++ PD F+P+ Sbjct: 417 ESEITQAIEKDQFAVWYQPQVNTQTHEVYGVECLIRWNHPEQGLIPPDLFIPIAEANGSI 476 Query: 549 ARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 VL++ + L + ++N+ + ++ ++ + + +++ Sbjct: 477 KELGYFVLKTACQQLRQWRIKNIFTGVMAINVSLRQFERNDLLAQVKKTLVDEMLPAESI 536 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LE+TE + + L + G ++AIDDFGTGY++ +RLK L D +KID FV Sbjct: 537 ELEVTESLFSEDNNYHTPILCALRELGVKVAIDDFGTGYSSLQRLKSLPIDNVKIDKCFV 596 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +I D IV + L+K + V+AE +ETQ+Q L LG QGYL RP Sbjct: 597 DNIEHCPEDVAIVMATILLSKTFKVDVIAEGIETQEQADKLSDLGCFNQQGYLYSRPLKA 656 Query: 728 AD 729 D Sbjct: 657 HD 658 >UniRef50_Q07XP4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07XP4_SHEFN Length = 829 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 105/571 (18%), Positives = 199/571 (34%), Gaps = 24/571 (4%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL------AALSVLLLLLC 231 + + A+ + + Sbjct: 236 AGVDGYLVTVVDVSEVKHAKQALYSEKERLRVTLNSIGDAVIATDTRGLITFMNPIAERM 295 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 T + + + + L L + + N + + Sbjct: 296 TGWRLKDALHQKIEDVMHLKDSDTQQPLLNPLYLALREQRIVAMALNSLLTSRGGHVFYV 355 Query: 292 AFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--- 345 A + + + ++ + + + + A D LT LPN L+ Sbjct: 356 EDSAAPIRNENGEMIGAIMVFHDVSEAMAMAMKMSHLANHDQLTDLPNRILLQDRLSVAC 415 Query: 346 -----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + + ID+ +F++ G I + R L L+ + L +L G E Sbjct: 416 STARSYGTKAAALLIDIDHFKFLNDSLGHQYGDELICMMARRLRSLIPASYTLARLGGDE 475 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++++S + + + L +N ++ F + + L+ Sbjct: 476 FVILMSETRSVEASSQLASTLVEAMHEPFVLDNQKFNVSISIGVSVFPNDAVDAEELMRH 535 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-- 515 ++ + ++ L +R AL +L ++ QP + + Sbjct: 536 ADVAMYRAKQEGRNR-FCFFSHDLESSLMERHHLETRLRKALINDELFVHYQPKIDLQTN 594 Query: 516 -GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 G + ++ +G +++P +F+PL + L QVL Sbjct: 595 IIIGAEALVRLANDEGELISPAEFIPLAEESGLIIMLGKQVLNKACAEAKRWLEMGHTIP 654 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN+ ++AG I + +++ + LEITE +A + +L G Sbjct: 655 ISVNVAAAQFADPDLAGMIKKALLDHNLPAHLLELEITETALMIDAADMQNKLSELISLG 714 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +IAIDDFGTGY++ LK+ D++KID FVKD++ N D IV++I L K+ L + Sbjct: 715 IKIAIDDFGTGYSSLAYLKKFNVDVMKIDMSFVKDMLNNKHDYEIVKTIISLGKSMGLVL 774 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +AE VET++Q L +LG QGYL RP Sbjct: 775 IAEGVETKEQSHALVELGCFMGQGYLFSRPL 805 >UniRef50_C6BSB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSB1_DESAD Length = 938 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 97/557 (17%), Positives = 205/557 (36%), Gaps = 31/557 (5%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAAL-----SVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 ++ E+ T++ + + I+GY F Sbjct: 368 YKMMEKALRASEEEYRTIAEYTFDWEMWIGPTGAVKYVSPSCERISGYPKAYFMEGPVRV 427 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYN---QNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 L + + + ++ + + L Sbjct: 428 EHILHKNDREFWQKALRGTFPSADGTDMRLFRRDGLLRWVSLTGHQVFADDGTSLGLRIS 487 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDN 359 +R + +++ ++ +AL DPLT L N + + +D Sbjct: 488 LRDITKRKFMEKQLQYEALHDPLTGLANRTLCCDRILQAVERSRRRDNYYFAVVFMDLDR 547 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + + + LL ++E + + + G E ++VL + +V Sbjct: 548 FKIINDSLGHNIGDKLLVEVSKRLLQTIRELDTVSRFGGDEFIVVLEELASPREGIRIVR 607 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + I +++ + + ++ + Q+ + Sbjct: 608 RIRDCLNDPIMIEGHKINIAASYGVLLSPTEYDKPEEIIQNANVAMHQAKESGRDR-IKV 666 Query: 477 REEMVSGQTTKQVLLLNTIRTA-LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 + + + + + L + +R A L +L L QPI + + G++ ++ G+ Sbjct: 667 FNKRMLEEAVQAMQLESDLRAAMLSGDELYLDYQPIYSLQSQSVVGFEALIRWEHPRRGL 726 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKNI 589 + P +F+P+ + L V+ + + + S+N+ P Q + Sbjct: 727 VMPGEFIPMAEESGLIFELGSWVVSEACRQMKSWQVNYDSASEMMMSINISPRQFSQPAL 786 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I+ + + + + +EITE A+ S+ + +L G ++IDDFGTGY++ Sbjct: 787 VDNILSKLSEFDLPARNLKIEITETAIMERAKQSVDMLNRLKSAGVLVSIDDFGTGYSSM 846 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+ D +KID FV+ + +T + IVR+I +LA L+VVAE VE +QQ L Sbjct: 847 SNLQEFPLDQLKIDLSFVRKMNESTENLEIVRAIVNLAHNLGLNVVAEGVEEIEQQDALR 906 Query: 710 KLGVQYLQGYLIGRPQP 726 LG ++ QGYL +P Sbjct: 907 DLGCEFGQGYLFSKPIS 923 >UniRef50_C4KCC9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4KCC9_THASP Length = 748 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 112/569 (19%), Positives = 199/569 (34%), Gaps = 36/569 (6%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVF-- 247 + + E+ L + + L + GY Sbjct: 157 TLERANKLMSQRLKDSERLHRYLVESSPDMIFTLDGSGRFTYINPRIKALLGYDRSALVK 216 Query: 248 FIIFTLGVGKLRYPFLNLTWAVS--TLCLLNYNQNFLQG-----VETEYSLAFILAVL-- 298 TL + + L S + +++ + Sbjct: 217 RPFTTLVMPEDLDRIDTLLSQPSSLPGESFHVELRLRSRRDGGGEGGSVTVSLTGIPMVT 276 Query: 299 ---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----QEAG-- 349 + L + R + QA D LT LPN + E Q Sbjct: 277 QENDRRVIGLYGVARDISERKRAEEIISFQAYHDQLTHLPNRVLFKDRLELAIAQAQRRT 336 Query: 350 --KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + ID + ++ +G +R+I L ++ + L +L G E ++L Sbjct: 337 GALAVMFIDIDRFKLVNDTFGHAEGDLLLRAIASRLSATLRRGDTLARLGGDEFTVLLPD 396 Query: 408 PETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + + F + T + L Q Sbjct: 397 INQPEDAEVIARKVLDALATPVRLSQGEFRATVSVGIALFPRDGTTAEDLTRHADAAMYQ 456 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDE 521 A + ++ + ++ L N +R A+ +G+L L+ QP + G + Sbjct: 457 VKRSGKN-AFRFFDPELNTRHRDRIALENDLRGAVARGELDLHYQPQVSLATRGIVGLEA 515 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLM 580 +L G + P F+ + + L + VLE+ LA + G PR S+NL Sbjct: 516 LLRWNHPGLGAIPPATFIQVAEEVGLISEISNWVLETACAQLARWQAEGVGAPRVSINLS 575 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + ++ GRI R+ ++P + +EITE + + L + G +AID Sbjct: 576 ACDFQRGDVVGRIRACLDRHGVAPSCLEVEITEGLMMDDTADIAAKVRALREAGISVAID 635 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY+ L+R +KID FV+D+ + I+ +IT +A+ L +VAE VE Sbjct: 636 DFGTGYSALAYLQRFPVSTLKIDRSFVRDL-EGPMTNPIISAITGIARGFDLDLVAEGVE 694 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L LG + +QGYL RP P + Sbjct: 695 NLEQADALRALGCEVMQGYLFARPAPAGE 723 >UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2U2_PELCD Length = 988 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 101/621 (16%), Positives = 211/621 (33%), Gaps = 25/621 (4%) Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 ++ + + + L + A + R Sbjct: 354 VVLFESLAAILVLVAVILSLLRIIRRRKRTQLALEQDRSKLEAKVLARTAHLTEANRQLR 413 Query: 189 M-IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 M I+ + A + + L + + + Sbjct: 414 MEILERNQAARALKESEQEKSLILNSSSDLIAYLDPGLRIRWANRTSSDRAGRQQTQIEG 473 Query: 248 FIIFTLGVGKLRYPF-LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + G + + T + + + Sbjct: 474 LPCYAAWHGLDSPCIGCPVLRSHKTGLPEHGEV--VTSDGQI--WLVRAFPFHDSQGRVS 529 Query: 307 YMVR---IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 + R H A D LT LPN ++ ++ G + L Sbjct: 530 GFATFSLDVSEQKKAQRTIHRMAYYDHLTELPNRALFQKELDRRLEEAVGRGHGLALMFL 589 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ G ++ I L + + L +L G E + +L+ + ++ Sbjct: 590 DLDHFKGVNDSLGHAKGDLLLQKIAARLQGCLGREDFLARLNGDEFIFLLTEIDDPVAVK 649 Query: 416 HMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + + + +G + + ++ L+ + + Sbjct: 650 ALAGNVQRIMASPFNLDGDEIYVGTSIGIACYPLHGVDVENLMKRADRALYAAKERGRN- 708 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 A++ E ++ + ++ L ++ AL + + L QP + G + +L D Sbjct: 709 AIELFSEQINARFHRRQQLEMRLQNALAKNEFFLEYQPQVDLQTGRMLGVEALLRWRNDD 768 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTLLQKN 588 G++ PD F+ L + L VL + + L+ + R +VN+ + + Sbjct: 769 LGLVMPDDFISLAEETGLIRPIGEWVLRTACQEYLSWWQPEGAELRLAVNISGQQIKHPD 828 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 I + P+ + LEITE A + E ++ L ++AIDDFGTGY++ Sbjct: 829 FVPIIDDILHSTGFDPRLLELEITETVAMEDVEGNIGTFRDLKARRLQLAIDDFGTGYSS 888 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+ D +KID F++D + A +V +I +A++ L ++AE VET++Q A L Sbjct: 889 LSYLRHFPIDRLKIDRKFIRDAAKCSDSASLVEAIMSMARSLHLDIIAEGVETEEQVAYL 948 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 K G + +QG+ GRP +D Sbjct: 949 WKQGCRQIQGFFFGRPMSASD 969 >UniRef50_C6N027 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N027_9GAMM Length = 505 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 93/457 (20%), Positives = 183/457 (40%), Gaps = 16/457 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 + L ++ R + L ++ QA D LT LPN + Sbjct: 40 IFECYSQPYTLDKKITGRIWSFRDITQRVILEKQLKYQATHDSLTGLPNRVLMLDRLGHV 99 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 Q + +D + ++ G ++++ + L +++ + L +L G Sbjct: 100 LDKAKRQNTLFAVIFFDLDRFKLINDSIGHDTGDELLKTVAKRLEFMLRGTDTLARLGGD 159 Query: 400 ELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++++ + E + L L + A F + +T+ LL Sbjct: 160 EFIVIVDNIKNEFDAGTVATHLLESFNSNFEIAGQSLSVCSSAGISIFPRDGKTIGELLR 219 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 Q+ + Q ++ +L N + A+ + ++Y QP + Sbjct: 220 NADAAMYQAKNSGGNQ-FQFYTAELGTQIKEKFVLENELHDAVLNNEFMIYYQPQFDITT 278 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KG 572 ++ + ++ GI+ P F+P + L L++ + Sbjct: 279 QKISSVEALIRWNHPKRGILLPIDFIPAAEETGLIIPIGEWTLKTACEQNKKWQDAGFLP 338 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VN+ + Q + +I + +SP + LEITE + E ++ ++ +L+ Sbjct: 339 MRVAVNISLKQIKQFDFVQKIKGILDSTGLSPNWLELEITENVLLNAIELALSSLPELYA 398 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G I +DDFGTG ++ L+++ D +KID F+ +I NT D +I++SI LAK +L Sbjct: 399 MGIHITLDDFGTGTSSINYLRKIPLDRLKIDQSFISNINLNTSDEVIIQSIISLAKKLNL 458 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +VAE VETQ+Q L + +QG+ +P ++ Sbjct: 459 KIVAEGVETQKQLEFLQSNHCEEVQGFYFSKPVAPSE 495 >UniRef50_B3PKS7 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKS7_CELJU Length = 940 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 113/609 (18%), Positives = 220/609 (36%), Gaps = 28/609 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 + + + T L + + + ++I + + Sbjct: 309 LALRAGLQSCWSQPILSATGKVLGTFAIYHNHPSQPEPHDLQLIDNEAR-LAALAIETTR 367 Query: 207 SLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKL 258 + + + + A +L+ ++ I GY Sbjct: 368 AENRLQLTACVFSHAREGILITDAQGNIIEVNTTFTDITGYTRDDVIGKNPRLLQSNKHD 427 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRS 315 F L ++ + Y + ++ + + + Sbjct: 428 AVFFERLWHSLVNEGAWCGEIWNKRKNGDLYVASMTISAVKDSRGQITHFVDLFNDITHI 487 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + R+ A D LT LPN L + + +D + ++ Y Sbjct: 488 KEHQRQLEHIAHYDALTHLPNRVLLADRMKQALLHSQRSGLSLAVMYIDLDGFKAINDQY 547 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 G + + +I +++E++ L ++ G E ++VL+ E Q +++ L + Sbjct: 548 GHDLGDQLLVAISSRFKSVLRESDTLARIGGDEFVVVLNELEQPAAYQPVLDRLLATAAD 607 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + L + + + + L+ + + Sbjct: 608 PLILRDQALRITASIGITLYPSDTADAEQLIRHADQAMYLAKQRGKN-GWHLFDVDRDVA 666 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 T Q L IR AL+Q + +L+ QP N G + ++ G+++P +FLPL Sbjct: 667 TKHQYESLERIRLALEQREFILHYQPKVNMKTGALVGAEALIRWQHPTRGMISPGEFLPL 726 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY- 600 I + + V+++ L + + SVNL L L Q A R+ L + + Sbjct: 727 IEEHPIGLDVGEWVIDTALSQIEHWQREGLALPVSVNLCALQLQQGRFAQRLSELLQAHP 786 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 ++P + LEI E A ++ + + G R A+DDFGTGY++ LKRL A+ + Sbjct: 787 DVAPGQLELEIVETSALADMTDVANTMRACNALGVRFAVDDFGTGYSSLTYLKRLPAETL 846 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F++D++ + D IV+ + LA+A V+AE VE+ +L LG + QGY Sbjct: 847 KIDQSFIRDMLDDPDDFAIVKGVISLAQAFHRQVIAEGVESVAHGEMLIPLGCELAQGYG 906 Query: 721 IGRPQPLAD 729 I RP + Sbjct: 907 IARPMLAGE 915 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 13/162 (8%), Positives = 33/162 (20%), Gaps = 14/162 (8%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---CTP 233 L M + R + +A + + + Sbjct: 48 LALEMQREEWRQAQTQLQTTIAQQRVAEEQLRTSARLLEASQAIANVGSVEMEFPSRRLY 107 Query: 234 YEND--FIAGYLVPVFFIIFTLGVGKLRYPFLN-----LTWAVSTLCLLNYNQNFLQGVE 286 + + I + F L + L A+ T + + Sbjct: 108 WSAETYRIHDTSPEEYTPTFDLSLDHYLPDSRQKLQAALQKALETGEVFDLELEKYTFKG 167 Query: 287 TEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNR-RWHL 324 + + L+ + + + R + H Sbjct: 168 RKIDVRTTCTATFDQLGRLIRLTGIFQDISARKQAERYQLHH 209 >UniRef50_A5UVR9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Roseiflexus RepID=A5UVR9_ROSS1 Length = 921 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 104/666 (15%), Positives = 209/666 (31%), Gaps = 48/666 (7%) Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 R WL + + L + Sbjct: 259 PAAVQILGDRLASLLPGSSSAPVAQSPDGRSWLTPHDLPFARALHGESVDAAEVRLPATD 318 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 + + + + + R + R E+R Sbjct: 319 CHPEQ-----WLSITARPLRDTDGLSGSVAIVRDVTEAK-------RAEEALRASEERYA 366 Query: 216 TLSWLAALSVLLLLL-------------CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 + A + L Y++ I F + ++ + Sbjct: 367 LAAQGANDGLWDWDLVSGKIYFAPRWKAMLGYDDTDIGTSPDEWFRRLHPDDRERVEWRL 426 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLN 319 L + L + + + ++ + Sbjct: 427 --LAHTRRLITSFELEYRILHRDGNYRWMLCRGMAVWDEHGRATRMVGSQTDITGRKQAE 484 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + AL D LT LPN ++ + L +D + ++ G Sbjct: 485 EQLAYGALHDALTGLPNRTLFMDRLSLALKRAQREKHLFAVLFLDLDRFKTINDSLGHAA 544 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 + ++ R L +++ + + +L G E ++L + +V + + Sbjct: 545 GDELLIAVARRLESVLRPGDTVARLGGDEFAVMLDRLNAPEEAEWIVERIHQALQAPLSV 604 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + E + L Q+ + + + + Sbjct: 605 RGHTVYTTASIGLALGNEGYERPEELARDADTAMYQAKMQRRARHV-VFDPDMRRKAVSH 663 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 L N +R+A+++ +L ++ QPI ++ + G+++PD+F+PL + Sbjct: 664 FQLENDLRSAIERNELRVHYQPIVALNGRRVVAFEALARWQHPQHGLISPDQFIPLSEEI 723 Query: 546 NLSARFDLQVLESLLKWLATHPCD---KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L VL + + +VNL L Q ++ +I I Sbjct: 724 GLINTIGHWVLRDVCHQVREWRRRRPRHFDMWVNVNLSAHQLAQPDLVAQIAHAIADAGI 783 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 P A+ +E+TE ++ E ++ + +L G + IDDFG GY++ L + D +KI Sbjct: 784 PPNAIKIELTENTFVTHREIAIAQLNELRSLGVGVCIDDFGAGYSSLGYLSQFPVDTLKI 843 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D VF+ + IV++I LA + ++VVAE VET++Q +L L +Y QG+L G Sbjct: 844 DRVFIARLGMMREHYEIVKAIITLAHSLGMTVVAEGVETEEQATMLSALRCEYAQGWLFG 903 Query: 723 RPQPLA 728 R P Sbjct: 904 RALPAD 909 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 20/221 (9%), Positives = 37/221 (16%), Gaps = 41/221 (18%) Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR-- 201 + D + +L T L L A+ R Sbjct: 139 LYLLSAAADHPAITDNPDIQEALHHPDNLATVDQTIQALLNRLEAEQRERRRAEAELRNL 198 Query: 202 -----------------------RDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----P 233 R + + +V++ Sbjct: 199 NLALEQRVAERTMLAEQRAEALKRSEEALRQQTNLLRAILDSMGDAVVVTDTDGHLIHHN 258 Query: 234 YENDFIAGYLVPVFFII--------FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 I G + G L L A+ + Sbjct: 259 PAAVQILGDRLASLLPGSSSAPVAQSPDGRSWLTPHDLPFARALHGESVDAAEVRLPATD 318 Query: 286 -ETEYSLAFILAVLISFSV--CLLYMVRIYHRSEWLNRRWH 323 E L+ L + +VR ++ Sbjct: 319 CHPEQWLSITARPLRDTDGLSGSVAIVRDVTEAKRAEEALR 359 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 119/773 (15%), Positives = 237/773 (30%), Gaps = 75/773 (9%) Query: 23 VLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLS 82 V L + I ++ + + L+ R +L +L Sbjct: 325 VFGPLDKAIPWFIVLGGLATSMLLAGIVFSLTTA-----RSRAQILANEMTRHLRTSERQ 379 Query: 83 FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYL 142 + + ++++ L+ R G + ++ L L P + ++ Sbjct: 380 LEEAQHLASLGSWILDPETGALQCSEEARRILGFEAGHLRPELPALLSRVPAAERPAVEQ 439 Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI--YNMLFYYLTRMIVSPHFAQIL- 199 + ++ S F L + + R P + Sbjct: 440 QIAQASRSMERSEFEHHLCLPDGTERWLHVIAQSAEEDGKTMVRGTVRDATRPRKDALRQ 499 Query: 200 -WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 IA L + RA T+ A ++ ++ + Sbjct: 500 GLEYRIARLLAGDGRAETVITQALEALC---TDLRWDCGALWSVGEDGVVRCAAAWHADH 556 Query: 259 RYPFLNLTWAVSTLCLLN---YNQNFLQGVETEYSLAFILAV-------LISFSVCLLYM 308 P + + S + + + A + + + + Sbjct: 557 IPPAVRQFASDSRSFEYRADEGSLGRAWKTGGIVQIDVLAAPGHFARDAMAREAGLAVGI 616 Query: 309 V-----RI-YH-------------------------------RSEWLNRRWHLQALTDPL 331 V + + R A D L Sbjct: 617 VVPMAVTDSITALELLGSNPYAIDAQTQESLRVIALQIAQYKQRKQAERSLRFMASHDGL 676 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T L N AL+ + + + +D + ++ G + I+ L Sbjct: 677 TGLFNRAALQHELARAIKRSNRHQKQFAVIFVDLDRFKHINDTLGHGVGDEMIKICGERL 736 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 L++E + + + G E +L+L + + + + L + Sbjct: 737 TALLREADVVARFGGDEFVLLLENLSSANDAAGLAEKVLACCAEPFFLAGRELHVSASVG 796 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + N + LL ++ ++ Q T+Q++L + +R AL+ Sbjct: 797 VSIYPDNGADAEALLKNADTAMYRAKERGRN-TFRFYAAKMNAQNTEQLMLESALRHALE 855 Query: 501 QGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 +G+L ++ QP + G + ++ G++ P +F+P+ + L LE Sbjct: 856 RGELEMHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFIPIAEELGLIVSLGKWALE 915 Query: 558 SLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + SVNL P + + I + + + P + LEITE Sbjct: 916 RACADSRSWQKYGLPKVLMSVNLSPRQFESRTLIADIQAVLEASGLEPSLLELEITEGAV 975 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 +N E + + + G +AIDDFGTGY++ LK +KID F+ D+ + Sbjct: 976 MANPEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVKIDRSFINDLSQDADA 1035 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ I LA + VVAE +ET Q L G QGY + +P P + Sbjct: 1036 RALIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLCKPVPADE 1088 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 30/279 (10%), Positives = 68/279 (24%), Gaps = 13/279 (4%) Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 G G + GM + + L+ ++ + + R+ + Sbjct: 225 IGSVGSGFSVAGMLSDVVGTDAMRTLRLRLIDAGPSRGAIGTRVETRFVTTASFGERQLL 284 Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 + + +G + + + + Sbjct: 285 FDSAALARPAAAPARSLERMLGFELGGHSWLVEVGQDENQVFGPLDKAIPWFIVLGGLAT 344 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY---- 234 +L + + + AQIL E++ LA+L +L T Sbjct: 345 SMLLAGIVFSLTTARSRAQILANEMTRHLRTSERQLEEAQHLASLGSWILDPETGALQCS 404 Query: 235 -ENDFIAGYLVPVFFIIFTLGVGKLRYPFL-----NLTWAVSTLCLLNYNQNFLQGVETE 288 E I G+ + ++ + A ++ + + TE Sbjct: 405 EEARRILGFEAGHLRPELPALLSRVPAAERPAVEQQIAQASRSMERSEFEHHLCLPDGTE 464 Query: 289 YSLAFIL-AVLISFSVCLLYMVRIYHR-SEWLNRR-WHL 324 L I + + VR R + R+ Sbjct: 465 RWLHVIAQSAEEDGKTMVRGTVRDATRPRKDALRQGLEY 503 >UniRef50_A0YPT5 Serine/Threonine protein kinase and Signal Transduction Histidine Kinase n=8 Tax=Bacteria RepID=A0YPT5_9CYAN Length = 2038 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 113/602 (18%), Positives = 206/602 (34%), Gaps = 30/602 (4%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 + + + L F + + ++ R++ Sbjct: 1439 LIGLLYLENNLICDAFQAERVELLNLLSTQMAIAIENS---------RLVQHQEELNNSL 1489 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 +++ +R ++ + + I Sbjct: 1490 QQERQQITRILERITDGFIGIDRQWKIV--YINQKAEQILEKKSQQIKGKTLWEACSETM 1547 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 L+ + Y L + L R + + Sbjct: 1548 TLLHEQQYREAQETGQSVCFEAFYSSSNYWLEITVYP---DQEGLSIFFRDITGRKQMEE 1604 Query: 321 RWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + A D LT LPN L + EQ + L ID + ++ G ++ Sbjct: 1605 KLISDAQHDALTGLPNRLLLSEHLQQMIQRTQEEQNYRYAVLFLDIDRFKVINESLGHLV 1664 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNT 431 + +I + L + + + + +L G E +++L PE E R + + + + N Sbjct: 1665 GDQLLIAIAQRLKGCITQQDIIARLGGDEFIILLDNPEDEVRTAARIQMALNAPFNLNGY 1724 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + + LL Q+ A + + + T + L Sbjct: 1725 KVFNTVSIGIVSSNTTYTRPEELLQSADIAMYQAKAEGRAR-YVIFDTTMQERATSLLQL 1783 Query: 492 LNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +R A++ L +Y QPI + G++ ++ L GI++P KF+PL + L Sbjct: 1784 ETDLRLAIEVEQLCVYYQPIVALKTGKLAGFEALVRWLHPKKGIISPIKFIPLAEETGLI 1843 Query: 549 ARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 VL+ L SVNL Q ++ RI ++ + Sbjct: 1844 IPIGQWVLQQACYQLKVWQEQFPQLEKLTMSVNLSVKQFSQVDLIPRIDQILSDLDLPGH 1903 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LEITE +N E + + QL ++ IDDFGTGY++ L + DI+KID Sbjct: 1904 DLKLEITESALMNNFERTRELLLQLKSRQIQLCIDDFGTGYSSLSYLHQFPVDILKIDRS 1963 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+ + + + IVR+I L+ S++ +AE +ET QQ A L +Y QGY RP Sbjct: 1964 FVRRLEGSNKNDEIVRTIIALSHNMSIAAIAEGIETSQQLAQLRNYRCEYGQGYFFDRPL 2023 Query: 726 PL 727 Sbjct: 2024 DA 2025 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 91/478 (19%), Positives = 191/478 (39%), Gaps = 20/478 (4%) Query: 268 AVSTLCLLNYNQNFLQGVE-TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 ++ L+ + + + + + + + Sbjct: 174 RLAQRESLSQEIRLSTKNGVRWHKIEVSHQPMTN---VVYLLTHDIQEERDHEVALYRLN 230 Query: 327 LTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN L Q E + L +D + ++ ++G + I+ Sbjct: 231 NYDGLTHLPNRNLLYQQLESALVNARKRHRQFGLLYLDLDGFKVINDNFGHRVGDELIQR 290 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDM 435 + + + + LY+L G E ++VL L+ + + S + + Sbjct: 291 VAERIKGSIPSSACLYRLGGDEFVVVLENTNEIEELESIAQSIMQNASNTYPVAKMEMMI 350 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + + + LL ++ + H + E+ ++ + L + Sbjct: 351 TASIGIASYPQHADDVDNLLKNADAAMYRAKSTGHNM-YCVYEDHMADNINAHLTLGGGL 409 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+++ +L+ QP ++ G + ++ + + G+++PD+F+PL + L Sbjct: 410 RKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWVHPELGMISPDQFIPLAEESGLILPLG 469 Query: 553 LQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ + L + SVNL +Q ++ + R + + P+ + LE+ Sbjct: 470 EWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFMQADLVDMVQRALEETGVDPEYLELEL 529 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE ++A+ S+ + K G ++IDDFGTGY++ LK+ +KID F+ D+ Sbjct: 530 TESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTLKIDRSFIHDLG 589 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + IV++ +A + +L V+AE VE + Q +L+ Q +QGYL +P D Sbjct: 590 LDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYLFSKPLSSDD 647 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 648 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 107/653 (16%), Positives = 223/653 (34%), Gaps = 41/653 (6%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFD-------FPLKISTFFGDADAIFTVVD 168 + + + I +L F PL ++ F + + + Sbjct: 283 ARQDLLHELFISGVGLLIAAIAQLAFLRAPFRTISDVSEALPLLANSAFEEIRKRLGINN 342 Query: 169 LLSLFTAVL-----IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 F L L Y L R+ S + +L A Sbjct: 343 RSGFFEDELDLLKSSTVDLSYKLERLETSLLERAQNLTERSVQLEAERDLVTSLLDTA-E 401 Query: 224 SVLLLLLCT------PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL-- 275 ++++ + G ++ L + ++ L Sbjct: 402 AIIITQDDNGRVETLNRFGQQVLGISESEAKMMGFLELNHETGSLPQHRQLLAHLIERKE 461 Query: 276 ---NYNQNFLQGVET--EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + + S + + + +L + +R A DP Sbjct: 462 HKVQMEASIRSSNGQMLQISWLHSVLSVPGGDIRVLTIGLDLTERMHAEKRLVWMANHDP 521 Query: 331 LTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN + ++ + +D+ + ++ G + ++ Sbjct: 522 LTALPNRLLFTEKVDEAIKRYQEKNGILAILFCDLDSFKDVNDSLGHPVGDELLQQAAER 581 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGA 439 + ++ + L +L G E ++L G ++++ + + + + Sbjct: 582 IQNIICNDGVLARLGGDEFTVLLEGRANIREIENVAQHIIRAFRQSFFIDGYEIFSTISI 641 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + + L+ + L + Q ++ L+N +R AL Sbjct: 642 GISLHPDHGDNVTSLIQHADVAMFDAKESGKNQ-LRFYHDEQGSQRYERFSLVNDLRRAL 700 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 ++ + ++ QP + G + +L + G+++P KF+PL + L VL Sbjct: 701 EKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAEEQGLIVPIGEWVL 760 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + R VN+ ++ +++ G + I P + LE+TE Sbjct: 761 RESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIRPHLLDLEVTENFL 820 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 E ++ + + + G +++DDFGTG+++ LK+L + +KID FV+DI ++ Sbjct: 821 LKQPEITIPKLHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTLKIDQSFVRDIGSDPEG 880 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV++I LAK+ L +AE VET +Q + L G +QGY RP P + Sbjct: 881 EAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSRPLPAEE 933 >UniRef50_C6MV72 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MV72_9DELT Length = 594 Score = 648 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 105/566 (18%), Positives = 203/566 (35%), Gaps = 22/566 (3%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIA 240 ++ S ++D ++ +L A +++ ++ + Sbjct: 9 LRSLQLGPSSEQRLTELQQDGERLAMLQEAIDSLPISAGITISDTDGKIIYVNAAESEMH 68 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 GY + R L T+ L ++ + + + + Sbjct: 69 GYAPGELIGKQASLLAPRRDVVLPRINHG-TIGLWKRESLNVRKDGLVFPVQLTSLPIKN 127 Query: 301 FSVCLLYMVR---IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 S L MV + R+ A D +T LPN L + Sbjct: 128 ASGRCLGMVTACEDITARKEFERQLETLAYYDTVTKLPNRALLMDRLHQALALAQREGRE 187 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +DN + ++ G + ++ + L + E L + G E ++V++ Sbjct: 188 LALLFLDLDNFKDLNSARGHEVGDKFLQEVAARLASCLCEANTLARPGGDEFVIVINSGP 247 Query: 410 TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E + L + + + F + ++ LL Q+ Sbjct: 248 DEEGVAATAARLQALFIEPFGIDGEEVYGSTSIGIALFPEDGSDVESLLRCADAALYQAK 307 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEIL 523 + + ++ +T ++V L N +R L + + L+ QP + G + +L Sbjct: 308 SEGKG-GYQFFSQEMNERTMRRVALENGMRQGLARDEFFLHFQPQWDLKSFRLTGAEALL 366 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 + G++ PD+F+P+ + VL + +VN+ Sbjct: 367 RWQSAEFGLVGPDEFIPIAESSGVIFDLGELVLRQACLHAVRWEEFCPDLKVAVNISGRQ 426 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q + R+ + + P ++ LE TE AE ++ ++ L + G R++IDDFG Sbjct: 427 FRQPGFLETMARVVRETGVRPSSLELEFTESVIMERAEKNIDALQALKRMGVRLSIDDFG 486 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK D IKID F+ ++VT++ DA I +I +A + L V+AE VE Sbjct: 487 TGYSSLNYLKHFPIDAIKIDRSFIAELVTDSDDAAIADAIISMAHSLKLKVIAEGVENSD 546 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L QG+ P P + Sbjct: 547 QLHFLVGRKCDEAQGFYFATPMPGEE 572 >UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BL35_9GAMM Length = 970 Score = 648 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 98/551 (17%), Positives = 194/551 (35%), Gaps = 29/551 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGK 257 + G +A ++ A +++ + I GY Sbjct: 289 AAEGSLLQAASVFEHANEGIMITDPEGTIQNANLAFSRITGYSRNEVIGQNPRIFSSGHH 348 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHR 314 F + ++S + ++ ++ + + + + Sbjct: 349 DDQYFAEMWKSLSEKGNWTNEIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLFSDITA 408 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + ++ A D LT LPN L + + +D + ++ Sbjct: 409 LKKQQQQLEKIAHYDALTGLPNRVLLSDRLQQAILQAKRHKRLLAVAFFDLDGFKEVNDT 468 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---S 423 +G + + + ++E + L +L G E ++VL + ++ L S Sbjct: 469 HGHSIGDKLLIELAERSKQALREGDSLARLGGDEFVVVLQDLHSSEESLPVLERLLKAIS 528 Query: 424 RQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + I N+T + + + ++ L+ Q + + Sbjct: 529 KPIFMNHTEICVSASIGITFYPQADEIDADQLIRQADQAMYVAKQSGKNR-YHIFDTEHD 587 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + I +AL+ + LY QP N + G + ++ + G++ P FL Sbjct: 588 RSVRGHHDQVLRIHSALNNREFELYYQPKVNMRTGQVVGAEALIRWNHPENGLVMPGDFL 647 Query: 540 P-LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P + L VLE + + SVN+ L L + R+ ++ Sbjct: 648 PVIAGDAGLVVEVGDWVLEQAMTQIDQWHQQGLDVPVSVNVDALHLQLPDFVDRLQQMLA 707 Query: 599 RY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + P + LE+ E A ++ I + G A+DDFGTGY++ LK+L A Sbjct: 708 AHPGVLPGDLELEVLETSALNDINRVSTIINECRDIGISFALDDFGTGYSSLTYLKQLPA 767 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 ++KID FV D++ + D I+ + LA A +AE VE+ Q +L +G + Q Sbjct: 768 HLLKIDRSFVCDMLDDLEDLSILEGVLGLANAFRCQTIAEGVESVAQGEMLLMMGCELAQ 827 Query: 718 GYLIGRPQPLA 728 GY+I +P Sbjct: 828 GYVIAKPMQAH 838 Score = 51.1 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 12/166 (7%), Positives = 29/166 (17%), Gaps = 13/166 (7%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 L+ + + ++ L I + +W + L Sbjct: 135 LWGGITLQAIIILGLVFSIHRGLKLRDELSSQRQSLRNIIWGTDVGTWEWNVRTGEAHLN 194 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN-------QNFLQG 284 T + GY + I +P + + Sbjct: 195 TRWAATL--GYTLDELQPISIETWWMYVHPDDVERSREALHKHFSGESDAYQCEVRMRHK 252 Query: 285 VETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + V+ + + A Sbjct: 253 EGHWVWVLDRGKVVAWSESGKPEWVSGTHTEITEKKAAEGSLLQAA 298 >UniRef50_Q2BQ91 Multisensor diguanylate cyclase/phophodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ91_9GAMM Length = 852 Score = 648 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 114/739 (15%), Positives = 247/739 (33%), Gaps = 49/739 (6%) Query: 38 HSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVV 97 H W+ + +++ ++ + G L+ + V Sbjct: 100 HDDIAIQFWIGTRYLEALILLYSPFAARQKVRGKPIFFLFACISLIITVLVFNDLFPRTF 159 Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFWLG----------LVTPIGIKCSMYLVGSFF 147 + + +++ + + L LF G + I + L +F+ Sbjct: 160 IDGEGLTDFKIYSEYLIDLILLAALISLFRCGEGIRYREKQLIAASIVMTMLAELAFTFY 219 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH------------- 194 +S G + + + + I L Sbjct: 220 VSVYGLSNIVGHLFKLASYWLIFNAIVISNIKKPYSELLASERRFRRLFENNEVALWNVD 279 Query: 195 ------FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP-VF 247 + L +R + ++ A ++ + + T F A + Sbjct: 280 LSGVHGELENLRKRGVTNLRQHLYENREIAPALADTIHITDINTASLELFSAETDLDPRA 339 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL- 306 + + L + + F E + + + Sbjct: 340 QSEQLMRTLPMSMFVEQLCAIWERQPNIRHEVVFRNVDNEELAAIVSFQ-IPETILEYAN 398 Query: 307 --YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 V + + ++ QA D LT L N + Q + + Sbjct: 399 VPVSVVDITQRKQDEQKIWRQANFDQLTGLANRNYFTDSLSHTIDLAERQGDKFALLYID 458 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G M + + L ++++ + +L G E ++LSG ++ Sbjct: 459 LDRFKQVNDTLGHSMGDKLLNDAAKRLKENSRKSDIIARLAGDEFAILLSGTGRPEVIEP 518 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +V L + + + F + + LL + ++ Sbjct: 519 LVTKLLNSLAAPYDLSGNETTISASIGIALFPEDGCEVADLLRKADSAMYKAKEDGRN-N 577 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKEGEGYDEILARLKYDGG 531 E + + ++ L + A++ + LY QPI + E + ++ G Sbjct: 578 FHFFTEEIEKEALRKRQLEQDLNRAIENQEFELYYQPIETLDAEVISAEALIRWNHPLRG 637 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIA 590 +++P +F+P + + +L A +L+ + P+ SVN+ +N+ Sbjct: 638 LVSPIEFIPFMEETSLIAPLGEWILKQACQDAMHWDHHCSVPPKVSVNISTRQFQNQNMP 697 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + ++ +S + LEITE + +S+++ + L G +++DDFGTGY++ Sbjct: 698 ALVKQILTDTGLSADRLTLEITESLMIDDEDSTIHQLNSLRLMGVALSVDDFGTGYSSLS 757 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ +KID F++ + D+ +V +I +A++ L VVAE VET Q L Sbjct: 758 YLKKFPVSYLKIDRSFIQGLPNCQEDSALVEAILSMAESLRLQVVAEGVETSSQANYLAS 817 Query: 711 LGVQYLQGYLIGRPQPLAD 729 L +Y+QGY + +P P D Sbjct: 818 LKCRYIQGYWLSKPIPQHD 836 >UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C8S6_CROWT Length = 906 Score = 648 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 97/575 (16%), Positives = 193/575 (33%), Gaps = 48/575 (8%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP--YENDFIA 240 + I + R + + ++ + I Sbjct: 342 YIGSVMDISDRKRMEEQLRIFECIVATTQDMMALIDQNYTYQIVNDAYARNFQRAKEEII 401 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 G V + + Y F G E Y A + Sbjct: 402 GKSVVEI------VGEEFMDTIQPHLDRCLQGEEVRYETWFDLGEEQRYYHALY-SPYRE 454 Query: 301 FSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 + + + + + + ++ + QA D LT LPN + EQ Sbjct: 455 ANKGVTSAVVNIHDITQIKESEQKLYYQAHHDTLTNLPNRMLMNTRLEQSIQQATRKGDK 514 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D + ++ G + + + L ++++ + ++ G E +++L + Sbjct: 515 LAVVFIDLDRFKNINDSLGHRAGDSLLEQLAQRLCQQRRKSDTVARISGDEFVVILEDIK 574 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 +V L + M F + + LL ++ Sbjct: 575 DTQHAGMVVGKLMRTFEEPFIIEGRTIKMTSSMGLSLFPDDGTDVATLLRNADAAMYRAK 634 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 + ++ + +LL N +R AL + + L QP + G + +L Sbjct: 635 EDGRN-TYCFYRKEMTSTVFEYMLLENALREALKKKEFYLLYQPQIEMLSHRCLGIEALL 693 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPL 582 + G+++P +F+P+ Q L VL + + K R +VN+ Sbjct: 694 RWHHPELGVVSPAQFIPIAEQSGLIQEIGTWVLTTACRQAKIWLEQKLDFGRIAVNVAAP 753 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA----------FSNAESSMYNIEQLHK 632 + + + + K + E ++ +E+L Sbjct: 754 QIQHGDFIQVVENVLKTTGLPAAY----------LELELTEGLLMKQTEQNIKQLEKLQG 803 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++ IDDFG GY++ LKRL D +KID F++D+ +T D I +++ L A +L Sbjct: 804 MGIKLTIDDFGIGYSSLNYLKRLPIDKLKIDQSFIRDLPHDTNDTAISQAVIALGYALNL 863 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++AE VE ++Q A L + G QGY +P P Sbjct: 864 QIIAEGVENEEQAAFLKEKGCHQAQGYFFSQPIPP 898 Score = 75.8 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 12/174 (6%), Positives = 31/174 (17%), Gaps = 11/174 (6%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 +I V L S + + I ++ + E ++ Sbjct: 187 ASIHWVQALGSAEKDDQGNVIRLLGIVMDITERKQLELEHKETEMALRESEALFRNMADH 246 Query: 221 AALSVLLLLLCTPYEN------DFIAGYLVPVFFIIFTLGVGKLRYPFLN--LTWAVSTL 272 A + V + DF + + Sbjct: 247 APVMVWVTDETGYSTYVSQSWYDFSGQKEGTALGFGWLDVIHPDERELARKRFLEFNEKR 306 Query: 273 CLLNYNQNFLQGVETEYSLAFILAV---LISFSVCLLYMVRIYHRSEWLNRRWH 323 + + F + + V + + + Sbjct: 307 QPFSIDYRFRRRDGVYCWGIDAGKPRFSADGQFKGYIGSVMDISDRKRMEEQLR 360 Score = 55.7 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 5/153 (3%), Positives = 30/153 (19%), Gaps = 15/153 (9%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC---TPYENDFIAG 241 + + A +E + + + + Sbjct: 76 RIAQRTAQLSQVLAELHSTQATLNSRENHYAQALKFSQTGSWEFDVVTEKVFWSEEVERI 135 Query: 242 YLVP-------VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + + + + + + + N+ + + + + + Sbjct: 136 WGMEPGTFRGELQQVQGAIHPEDVEHWQKNVQDCREKGKEHRIEYRIIHPDASIHWVQAL 195 Query: 295 LAVLISFSVCLL---YMVRIYHRSEWLNRRWHL 324 + ++ +V + L Sbjct: 196 GSAEKDDQGNVIRLLGIVMDITERKQLE--LEH 226 >UniRef50_C6XE67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE67_METSD Length = 910 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 108/621 (17%), Positives = 209/621 (33%), Gaps = 44/621 (7%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 +A + A L ++L Y L+R+ R Sbjct: 290 IHGRVWSVHIASKPAFEAALDRHRSSLIAGAGLAVSVLLYLLSRLFAYRTQTLKTMRDMH 349 Query: 205 APSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLR 259 + E+R + V + + G ++ Sbjct: 350 KDLILSEQRWKFALEGSGDGVWDWDIEKNEVIRSSRWKTMLGMEDWEMGPELEAWKERIH 409 Query: 260 YPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMV 309 ++ + L + + V+ + ++ Sbjct: 410 PEDVSRVLSDLEKYMNGETTQYINEHRLLCKDGSWKWILARGMVVDWAADGRPLRMVGTH 469 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRI------------ 357 + + QA D LT LPN R QE KS Sbjct: 470 TDITKLKESESLVWKQANFDQLTELPNRRMFYDRLAQEIKKS------NRLGLPLALLFL 523 Query: 358 --DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 D+ + ++ G ++ R + +++ + + +L G E +++LS E + Sbjct: 524 DLDHFKEVNDTLGHDKGDQLLQEAARRINHCVRDTDTVARLGGDEFIVILSELEDLNSID 583 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + + + ++ LL + + A Sbjct: 584 RIAQAILCKLSASFKLGEDIAFVSASMGITLYPTDANSIDNLLKNVDQAMYSAKASGRNR 643 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + + +++L+ N +R AL + L ++ QPI + + + +L Sbjct: 644 -ISYFTPSMQQAAHQKMLITNDLRLALQEQQLQVHYQPIIHLASGTIQKAEALLRWHHPQ 702 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKN 588 G+++P +F+P+ L V E + + + SVN P+ + Sbjct: 703 RGMVSPAEFIPIAEDTGLIMEIGDWVFEQAMVQVKKWQQQRGAHFQISVNKSPVQFKNDS 762 Query: 589 IA-GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + K+ + Q++++EITE +++ + G ++A+DDFGTGY+ Sbjct: 763 STHDQWLDYMKQLGLVGQSLVVEITEGLLLDTSQNVSKKLLAFRDAGIQVALDDFGTGYS 822 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+R D IKID FV++I T D + SI +A LSV+AE +ET++Q AL Sbjct: 823 SLAYLRRFDIDYIKIDQSFVRNISTQPDDLALCESIIAMAHKLGLSVIAEGIETEEQCAL 882 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G Y QGY P Sbjct: 883 LKAAGCDYGQGYWFSPAVPAD 903 >UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07PV4_RHOP5 Length = 928 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 118/727 (16%), Positives = 223/727 (30%), Gaps = 41/727 (5%) Query: 32 SPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLG 91 + ++ SS A P + + G + + +T + G Sbjct: 196 NGTVLVGSSARPGAAEPGGSIAASELFRFAAGNAGGTRELADAAGETTVWTVAETQAIGG 255 Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 +V+ + L L L+ G+ + + Sbjct: 256 VNLYVIA-----GHVKSDLVAAPNLRLAEDMAVLAVFSLLLIAGVWLLAEIGIRSQLGRI 310 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 A + + + L I + + S E Sbjct: 311 AKLAERIAAGDLSARILPPFPKGELGNLMSLLNGAADSIQTQRRDIEHLNIRLLQSQQLE 370 Query: 212 ----KRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGV------- 255 +R +L+ + + G V Sbjct: 371 KTERERLDIAISNITRGLLMYDADGRLVVCNRQYIEMHGLSPEVVKPGLPFCDLMAYRKQ 430 Query: 256 -GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 G ++ +L S+ + L + L M + Sbjct: 431 IGSFDGDVEEFCSSIRRNLADGKISRYLLETGDGRSIESVTKPLP--TGGWLVMTEDVTQ 488 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-------GKSFCCLRIDNLEFMSRHY 367 + R A D LT LPN + E + + ID + ++ Sbjct: 489 RRLYDERIAHMAHYDALTDLPNRVLFHERLESALDAREPDDQLAVFYIDIDQFKSVNDSL 548 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G + ++ + L + + ++ G E ++ + +V + + Sbjct: 549 GHSIGDELLKIVADRLRGCLAATDFAARIGGDEFAIIQTAVAKATDTTDLVERIYAAIRK 608 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 L + L LL + A E + + Sbjct: 609 PYDCAGHLLTADASIGIALAPQHGANLDQLLKNADLAMYGAKAEGR-RTYRFFEPAMEAR 667 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 + +R A+ G +Y QP + + G + +L G+++P +F+P+ Sbjct: 668 VIALRTMEIDLRQAIADGGFEIYYQPQLRLCDDKVTGCEALLRWRHPVRGMISPAEFIPV 727 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L + VL P + SVN+ P+ + A ++ Sbjct: 728 AEETGLINQLGEWVLVESCAEAVKWPG---DVKVSVNVSPVQFGSEGFALKVAAALANSG 784 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + LEITE + E+++ + Q+ G IA+DDFGTGY++ L+R D IK Sbjct: 785 LPAHRLELEITEAVLIRDDEAALTMLHQIRALGVGIALDDFGTGYSSLSYLRRFPFDKIK 844 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+K+I A IV+++ D+A A+ ++ AE VET+ Q L +LG +QGYL Sbjct: 845 IDRSFIKNIEDANGSAHIVKAVVDIAAAQRMTTTAEGVETEGQLNELRRLGCSEMQGYLY 904 Query: 722 GRPQPLA 728 P P + Sbjct: 905 SPPVPAS 911 >UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21G77_SACD2 Length = 878 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 104/570 (18%), Positives = 208/570 (36%), Gaps = 29/570 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGY 242 R + A + +R L+ LA + +L + IAG Sbjct: 289 RHHILIMRDTTEIEIARAQHEDEVERFRILADLAPVGILQANSDWSGIYANDRWCEIAGR 348 Query: 243 LVP---VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + + + L A+S FL+ + + I Sbjct: 349 SMSDILELGWLSAIHPDHFHNVIEPLRTAISEGKEFKRECLFLKPNSEQTWVELHARPQI 408 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------- 349 + + + A DPLT L N + E Sbjct: 409 STNGDITGFIATILDSTFRHEAEDKLRELAEHDPLTGLANRAMFQHRLEHGLSRTHRHGS 468 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + CL +D + ++ G + + + L ++E + + ++ G E +++L G + Sbjct: 469 LALLCLDLDGFKNVNDTLGHDSGDELLIEVAKRLTKCVREEDTVARVGGDEFMILLEGLK 528 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFD-GNQETLQPLLGQLSWLAEQS 465 + + + N + + G++ + L+ Q ++ Sbjct: 529 DAQIAAEVSEKILNSLEPPCSINRQEVFISTSIGITFATKGDKNDSKSLMKQADMALYRA 588 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEI 522 + + +++ L N++ AL + + ++ Q + + G++ + Sbjct: 589 KHEGRN-NYQYYSPDLERASQERLYLGNSLHHALQRTEFQVFYQFKSSLSTHKVTGFEAV 647 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNL 579 L G + PD+F+P++ + L + + A + +VN+ Sbjct: 648 LRWEHPRRGQLQPDQFIPILDESGLIVPVSRWLTHTSFMQHAKWKAKGLIEKDAKIAVNV 707 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P L + + I P +VI+EITE ++E + + L + G I++ Sbjct: 708 SPRLLRDPYFIRGLANSIQDSKIDPTSVIIEITETALLEHSEQTTDALNGLKRIGVAISL 767 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTG+++ LKR D IKID FV++++ ++ D IV+++ LAK+ L+VVAE V Sbjct: 768 DDFGTGFSSLTHLKRYPIDQIKIDRSFVQNLLKDSGDKAIVKAVIVLAKSLKLTVVAEGV 827 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E + L L QG+ + +PQP + Sbjct: 828 EDKATLDYLASLNCDEYQGFYLNKPQPAEE 857 >UniRef50_A6W3H5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3H5_MARMS Length = 804 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 103/636 (16%), Positives = 215/636 (33%), Gaps = 33/636 (5%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 + S +L+G+ + + I + L Sbjct: 151 FIRRNIRLITTSLISAFLLGAAMFMLFYVQISHPLSRLIDQLGQLEREDNDPAQLKFKQT 210 Query: 185 YLTRMIVSPHFAQILW----RRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYE 235 + ++ E + ++ +LL +L E Sbjct: 211 AREDELGILARTITALWHKRKKVETELAKSEAYFKAVLHQSSECMLLTNLKGQILDCNSE 270 Query: 236 NDFIAGYLVP-VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + Y P + + + L S + ++ + + + Sbjct: 271 TCRLLAYDKPTLLMLTIQDIDPEQTPNLLREWADNSLGDPKIFEAHYHRSSGVSFPVEVC 330 Query: 295 LAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------- 345 ++ + L R + + + A D LT LPN R L Q E Sbjct: 331 GNIITLDHEAHFLASFRDITQRKLDQEQVKFLAYYDALTNLPNRRFLNQNIEKVITTAQN 390 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + +D + ++ G + + + +L + + + ++ G E +L++ Sbjct: 391 NGYIGGLLFIDLDRFKNINDSMGHHVGDALLVEASKRILACLSQADIAVRMGGDEFVLLI 450 Query: 406 SGPETEGR-----LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 + + L S+ T L + F + +L Q Sbjct: 451 PVLGDNAEEAQSRVTLLAETLLSQLCQVFRLEQTDLFISASIGISLFPFDGANDAQILRQ 510 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KE 515 ++ A + + Q ++ L + A+ + L QP N + Sbjct: 511 ADTAMYEAKESGRN-AYRFYRQEMQQQVAERAALEKALHRAISNDEFYLVYQPQVNEHGQ 569 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR- 574 G++ ++ + G++ P++F+P+ + L VLE++ + L P Sbjct: 570 LIGFEALIRWSNEELGLVPPNRFIPIAEEIGLIYDVGNWVLENVCQQLKAWQDIGLPPTF 629 Query: 575 --FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 ++N+ P ++ + + R + + LEITE N S + +L + Sbjct: 630 KGVAINISPYQFAKECFVESVCDVIDRTQVDSSLLDLEITEGMLVENIASVAEKMWRLKE 689 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 R +IDDFGTGY++ L+ + +KID FV+D+ ++ +I+ +I +A +L Sbjct: 690 HNIRFSIDDFGTGYSSLRYLQHFPINQLKIDQSFVRDLTSDPQSHVIINTIVSMATHMNL 749 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 SV+AE VE Q ++ +L +G QGY +P Sbjct: 750 SVLAEGVEHQVEKDILENMGCAKYQGYFFSKPVKAD 785 >UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAJ7_CHRVI Length = 1030 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 125/741 (16%), Positives = 239/741 (32%), Gaps = 32/741 (4%) Query: 19 TLTVVLIQLSRFI-SPLAIIHSSYIFLAWMPLCVMLSILFIF--GWRGVVPVLCGMFCTN 75 +V I S + P + + L + L Sbjct: 266 IGGLVGITASCHLQEPAFAALIGAVAGLVVSLGTATLERLRIDDAVGAIPAHLFAGIWGT 325 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 L + + + G + + + + L + ++ RL+ L + Sbjct: 326 LAVALFAPVTDFELTGGRLAQLEIQTLGILAVGAYAFGVSLAALWLLDRLYRLRVDPESE 385 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 L + T + + + Y ++ Sbjct: 386 RLGLNVAEHGASTEILDLLTEMDTQRRHGDFSRRVFAEPHTEVGQIARQY-NHVLQRVSE 444 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFII 250 + E R + +L + L G Sbjct: 445 EIHKREAILRDLTASETRKSAILDAVLDCILTIDHEGHLLEINPAAARTLGCSRRAVLGR 504 Query: 251 FTLG----VGKLRYPFLNLTWAVSTLCLLNYNQN----FLQGVETEYSLAFILAVLISFS 302 L T NQ + + +A + S Sbjct: 505 PLADILIPDEARPAYDEALAQGFVTEGRFVVNQRSHTILKRISGETFPAELTIARVKSGP 564 Query: 303 -VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------QEAGKSFCCL 355 + R R + RR H A D LT L N + Q + A + L Sbjct: 565 YPEFNFHARDITRQREVQRRLHQLAHYDGLTGLANRQFFRQNLSIHLMGPEPAQIAVLFL 624 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G +R++ L +++ + + + G E ++ L G + + Sbjct: 625 DLDRFKTINDTLGHAAGDQLLRTVAERLRSVLRSEDLVARWGGDEFVVALLGVQDRDAVM 684 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 H + + + + + + L+ ++ ++ Sbjct: 685 HKAADIIARLAEPHPLAGRSIRVPTSIGAALYPEGGTSADLLIRNADLALYRAKSNGRGH 744 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + +++ + ++++ N +R ALD+G+L L+ QP + G + +L Sbjct: 745 C-QLFDPVLASEISERLEFENDLRDALDRGELELFYQPQVEVGSGRIVGLEALLRWRHPG 803 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G+++P F+P++ + L VL + + PR +VN+ L+ Sbjct: 804 KGMVSPTVFVPILEELGLIELVGEWVLRTACRQHRVWRERGLSPPRIAVNVSGRQFLRLG 863 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 A + R+ + AV LEITE + + + + +L + G IA+DDFGTGY++ Sbjct: 864 FAETVERILTEEGTAVTAVELEITETVLAHDTDVCIETLRRLKRLGLEIALDDFGTGYSS 923 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR D +KID FV + N DA I +I LA+ L +AE VET Q L Sbjct: 924 MSYLKRFPVDTLKIDRAFVAECDVNAEDAAICTAILSLARGLGLKTLAEGVETPGQLEFL 983 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + G Q+ QG+ RP P+ + Sbjct: 984 RREGCQFYQGFFFRRPMPVEE 1004 >UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Enterobacteriaceae RepID=C8QI00_9ENTR Length = 949 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 112/599 (18%), Positives = 223/599 (37%), Gaps = 36/599 (6%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR-------A 214 + F ++ + F +TR + + R + + + Sbjct: 348 SAFWAHVVIDAIHNEEGRLIGFAKITRDVTERREHEQQLLRARDLAEAQSAKASELSKFL 407 Query: 215 FTLSWLAA------LSVLLLLLCTPYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLT 266 T+ ++ +L + + + G + +L F +L Sbjct: 408 DTIITHIPSCVIVEDAITREILMVNDKAEQLFGINKLLIMHKRPHECMSAELSDYFNSLA 467 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWH 323 ++ + L E L + + ++ +V + R H Sbjct: 468 DIALRSEGIHTREQLLLTAGGERILHTRATTIAGKDLRQNFVMLIVEDVTDQREADARIH 527 Query: 324 LQALTDPLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT LPN Q + + CL +DN + ++ G + Sbjct: 528 HMAHHDNLTSLPNRILFRQKLSEALRADTQGGYITATLCLDLDNFKNVNDALGHQIGDDL 587 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTG 432 +R++ + L ++++++ L ++ G E +VL + L ++ Sbjct: 588 LRTVAKRLRNVLRDHDTLARIGGDEFAIVLPNIRNADEAAVVAQRLIEAIRPPVNLEGHN 647 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L +G T + +L ++ + + + + ++ Sbjct: 648 LSVGLSVGIALSSQAANTPEHMLRCADMALYEAKRNGRNR-YEHFTLEMDDLARSRRVIE 706 Query: 493 NTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R A+ L LY QPI + GY+ ++ G++ P+ F+P+ + L Sbjct: 707 NDLRDAISGRQLKLYYQPITDGNEKGIIGYEALMRWHHPIKGLIMPNDFIPIAEETGLIH 766 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 L + A+ ++ SVNL PL ++ + + ++P + + Sbjct: 767 LLGAYALYEACREAASWEGEQ---SVSVNLSPLQFKNSSLISVVEGALRESGLAPHRLEV 823 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE +A ++ ++ L G +IA+DDFGTGY++ L+ D IKID F+ D Sbjct: 824 EITESVLLDDALGNIRTLQNLKALGVQIALDDFGTGYSSLSYLRSFPFDKIKIDKSFIND 883 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + I+R+IT ++++ + + AE VE+ +Q A L + G QGYL GRPQP Sbjct: 884 MGDSREALAIIRAITGMSRSLDIQITAEGVESSEQFARLREEGCTLFQGYLFGRPQPSE 942 Score = 63.1 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 11/173 (6%), Positives = 32/173 (18%), Gaps = 14/173 (8%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 + F ++ + + +TR R + Sbjct: 220 SAFWAHVIIDAIRDDTGKLIGYAKITRDCTEQQALLRAQREQEKTFRLLVTGVRDYAIYM 279 Query: 222 AL-------SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 Y ++ I G VF+ Sbjct: 280 LDVQGRVVNWNAGAQRAKGYRSEEIVGQHFSVFYGAQERQSKAPDANLGIALKT----GR 335 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHL 324 + + + ++ + + L+ + R ++ Sbjct: 336 FEDEGWRYRKDGSAFWAHVVIDAIHNEEGRLIGFAKITRDVTERREHEQQLLR 388 Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 11/118 (9%), Positives = 27/118 (22%), Gaps = 13/118 (11%) Query: 214 AFTLSWLAAL-SVLLLLLCTPYENDFIA-----GYLVPVFFIIFTLGVGKLRYPFLNL-- 265 L ++ +L L EN GY+ + ++ Sbjct: 137 FRLLVEGVTDYAIYMLDLDGNVENWNAGAQRAKGYVAEEIVGQHFSRFYSAQDRLNHIPE 196 Query: 266 --TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWL 318 + + + I+ + + L+ + R + L Sbjct: 197 KNLGIAFKTGRFEDEGWRYRKDGSAFWAHVIIDAIRDDTGKLIGYAKITRDCTEQQAL 254 >UniRef50_C6WYR4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYR4_METML Length = 681 Score = 647 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 109/634 (17%), Positives = 215/634 (33%), Gaps = 29/634 (4%) Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + + + L L P S + + I G D + + Sbjct: 42 ACLMQFDIILLDLSLPDSQGSSTFWRLHDVVSNVPIVVMTGHDDEVLATELAQA---GAQ 98 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND 237 Y + R ++ I +R E + L +L L L + Sbjct: 99 DYLVKGSVDGRWLLRVMRYAIERKRAELELRQSEAKVRALYEAVPDLLLFLDLEGRFLEC 158 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST--------LCLLNYNQNFLQGVETEY 289 A LG + + ++ Sbjct: 159 KPAKDFQTHIEPEHFLGKTIHEALPEGIAEQAMLCLEKVVVGSGITSFEYQMALPQGVSN 218 Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG 349 + + + +L +VR S+ ++ H A D LT LPN ++ Q Sbjct: 219 YES---RFIRASEEQVLCIVRDISESKRTQQQLHFLAHYDTLTGLPNRLLFNESLHQAQT 275 Query: 350 KS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +D + ++ G + ++ + + ++E++ + ++ G E Sbjct: 276 HANRTSDTIAVMFIDLDRFKNINDTLGHGIGDKLLQQVGNRISLCIRESDTVARMGGDEF 335 Query: 402 LLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +VL E + + + +G + Q+ LL + Sbjct: 336 AVVLVNVREESDAAVVAEKIIDALRLPFMVGEHEVFVGASIGITFYRPGQDDRDVLLEKA 395 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNK-E 515 + + +++++ N +R ALD+ + +LY QP + Sbjct: 396 DVAMYHAKERGRN-NFQFYSSEMDAVAYERLVMENHLRHALDRKEFILYYQPQIAVDGGR 454 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF 575 + +L D G++ P +F+ L+ + L VL++ + R Sbjct: 455 VTAVETLLRWQHPDRGLVAPGEFISLLEESGLIVPVGKWVLKTSCQQGRIWYDAGTPVRV 514 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL + + + + P+ + LE+TE +A + + QL G Sbjct: 515 AVNLSVRQFKHPGLVADVAEILAESGLPPELLELELTESMFMDSATGDVNKLTQLKALGV 574 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +AIDDFG+G ++ LK D +KI FV ++ N D+ I ++ LA+A + + V Sbjct: 575 SLAIDDFGSGASSLAYLKDFPVDTLKICQSFVLNLPHNNDDSAIASAVLGLAQAMNFTSV 634 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VE QQ L + Y QG+L +P P+ + Sbjct: 635 AEGVENDQQANFLRERRCDYFQGFLFSKPLPVEE 668 >UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=D1CEK7_THET1 Length = 1785 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 98/574 (17%), Positives = 196/574 (34%), Gaps = 33/574 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-------CTPYENDF 238 + + + A I +RR + E R L + + + + Sbjct: 1202 FLQSVSNILAAAIEYRRAAQDLMRAEARYRKLVEQIPAVTYIEEMGMRGVVSYISPQVED 1261 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLN-----LTWAVSTLCLLNYNQNFLQGVETEYSLA- 292 + GY + + + A + + Sbjct: 1262 MLGYTPEEWTSNPDPWSRIIHPDDYEDVATSMEKAEELGIPFRKEYRMISKSGEIVWVRD 1321 Query: 293 --FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 I+ + ++ + L + QA D LT LPN Sbjct: 1322 EAVIVRDAEGQPLFWQGVLVNITDKKKLEDKLAYQAFHDALTGLPNRALFMDRLKGALAR 1381 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + L +D + ++ G + + LL +++ + + + G E Sbjct: 1382 AKRYNSCCAVLFLDLDRFKHVNDSLGHQYGDQLLIEVGNRLLSVVRSADTVARRGGDEFT 1441 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L + + + + N L + + + L+ Sbjct: 1442 ILLEPICELEYAKQVAERVIKELEKPFLINGQELYISTSIGIALSNE-YSDAEELIHNAD 1500 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 + + + + +S T +++ L + +R A+ + + L QP+ +KE Sbjct: 1501 VAMYWAKSRGRAR-YEVYDLSMSTFTLEKLKLESELRRAVQREEFSLVYQPVVRLRDKEV 1559 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPR 574 + +L + G++ PD+FL + L +L + + + P Sbjct: 1560 VALEALLRWHHPERGLLLPDQFLKELEDTGLIMPLTDWMLREVCRQHKEWQKRVAGELPL 1619 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN + + + + + +SP + LEITE A +A S+ ++ L G Sbjct: 1620 VSVNFTARQFQKATMLEDLASILQDMDVSPSCLQLEITETVAMDDAASTARTMKGLKDLG 1679 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++A+DD GTGY++ L++ D++K+D FV + + IV ++ LAK+ + V Sbjct: 1680 VKLALDDVGTGYSSLSYLRKFPLDVLKVDRTFVMGLGVDPDSTAIVHALVMLAKSLGMLV 1739 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE Q Q L LG QGY RP Sbjct: 1740 TAEGVEKQVQVDALSTLGCDLAQGYFFSRPMEPD 1773 Score = 69.2 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 21/224 (9%), Positives = 49/224 (21%), Gaps = 29/224 (12%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 + + + + I R + S Sbjct: 575 LYGAINSDADVWAEEYRFRKADGSYAYVLDRGYIVRDASGKAIRAVGSM-LDITHRIEAA 633 Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLV-PVFFIIFTLGVGKL 258 E+R + +A+ + L+ +L T I GY + F V Sbjct: 634 KALRESEERFKAIFEDSAIGMALIDQEGRILKTNKALTKILGYTQNDLIEKNFLELVHPD 693 Query: 259 RYPFLNLTWAV---STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIY 312 L + + Q ++ E ++ + S S + + M+ Sbjct: 694 HESTLRGRFTRIFSGKNTHYHVEQRYIHKDGHEIWGNLTVSAIRSHSGDVDLAVCMLEDI 753 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLR 356 + + R + + + Sbjct: 754 TSRKQADSRI----------------LFQARLLDQVPVAVIACD 781 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 12/162 (7%), Positives = 33/162 (20%), Gaps = 15/162 (9%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-- 234 L ++ + + + E+R +S ++ L T Sbjct: 476 LQLLVILADQAAIAIENAKLVEKLSLEAEALRKSEERNQLISRATNDAIWDWDLSTNRII 535 Query: 235 ---ENDFIAGYLVP-VFFIIFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQG 284 + GY F + + S + F + Sbjct: 536 WNDAIQRLFGYEADHEFETSIEWWEERCHPDDIERLRESLYGAINSDADVWAEEYRFRKA 595 Query: 285 VETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 + + ++ S + + + Sbjct: 596 DGSYAYVLDRGYIVRDASGKAIRAVGSMLDITHRIEAAKALR 637 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 13/168 (7%), Positives = 28/168 (16%), Gaps = 13/168 (7%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 +S + L + I S A + Sbjct: 727 IWGNLTVSAIRSHSGDVDLAVCMLEDITSRKQADSRILFQARLLDQVPVAVIACDMQMRV 786 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 + GY + V + Sbjct: 787 VHW------NSAASDLFGYTPQEAIGKEVFELASTIDKSENIREVIQVVLREGSWRGEVD 840 Query: 281 FLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQ 325 F ++ + V L+ ++ + + R Q Sbjct: 841 FPLED-RVVPAQVEISAVRDKRRMLVGLVAVIVDLSDQKKVEERLRRQ 887 >UniRef50_Q1JVN0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVN0_DESAC Length = 635 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 110/550 (20%), Positives = 208/550 (37%), Gaps = 26/550 (4%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYL---VPVFFI 249 R+ + + ++ L A+ + +L GYL +P I Sbjct: 67 RRLRQALVKQVKLQEHYLDLFENASDLIQSVRLDGSILYVNRAWKETLGYLDHDIPSLNI 126 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA--FILAVLISFSVCLLY 307 + + + L F L L + Sbjct: 127 FDVISSADRPICRNRVISLLDGAELGPIEVTFQCKDGRAVLLEGNISLRQDEGQPHSVRG 186 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDN 359 + R + ++ H A D LT LPN L+ + + +D Sbjct: 187 IFRNISERKQAEQKIHQLAYYDTLTGLPNRVLLQDRLIHAIADARRFSHYLAVMFIDLDQ 246 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ R L +++N+ +L G E +++LSG + L H+ Sbjct: 247 FKKVNDTLGHSVGDLLLKDAARRLRSCLRDNDTAARLGGDEFVVILSGFKQISNLPHIAR 306 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + S+ L + + + + + L+ + H Sbjct: 307 KVLDVLSQPYFLAERELVVSASLGISVYPQDGDNAELLMRNADMAMYAAKYDHGN-GYCF 365 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 E ++ T+Q+ L +R AL +Y QP + ++ G + ++ + G ++ Sbjct: 366 FSEEMNKNATRQLELEEQLRHALIDQQFEVYFQPQFDWSRQKLTGVEALVRWNRAQGEVV 425 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGR 592 P+ F+P++ VL + C + SVNL ++ + Sbjct: 426 PPEMFIPVVESTGQIVALGEWVLRQACLQIQQLQCQLNVPLQLSVNLSGRQFDDLSLIYK 485 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + ++ + + P+ + LEITE NA+S+ + QL + G R+AIDDFGTGY++ L Sbjct: 486 VKKILQETNFPPEQLELEITETILMENADSARKTLGQLSQQGIRLAIDDFGTGYSSLNYL 545 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 D +KID F+ +++ + A IV +I +A LSV+AE VET +Q + L LG Sbjct: 546 NTFPVDRLKIDKSFLVNVMHDDNHAAIVATIISMADTLGLSVIAEGVETMEQVSFLSDLG 605 Query: 713 VQYLQGYLIG 722 Q +QG++ Sbjct: 606 CQAMQGFIFS 615 >UniRef50_Q72EZ6 Sensory box/GGDEF domain/EAL domain protein n=3 Tax=Desulfovibrio vulgaris RepID=Q72EZ6_DESVH Length = 1072 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 103/598 (17%), Positives = 202/598 (33%), Gaps = 28/598 (4%) Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 + T +S+ + + R I S + Sbjct: 456 PLRTRTELLRGGVAFPAEVSVRSLDIEGERTLLVALRDISSRIHTEHRLNLFELVFRNAL 515 Query: 212 KRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWA 268 + +L I G+ R + L + Sbjct: 516 EGILITDAS------GAILAVNPAFTTITGWNERDAVGRNPRILKSNRHDRGFYERLWHS 569 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQ 325 + + Y ++ + S + + + + Q Sbjct: 570 LHERGAWEGEIWNRRINGENYPEWLSISAIRDESGATTNYVALFHDISDLKAKEAQIRYQ 629 Query: 326 ALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 + D LT LPN L + + IDN + ++ G I Sbjct: 630 GMHDALTGLPNRALLLERLAGELKEGQGTGRLCGLLYIDIDNFKTINDSLGHEAGDKFIA 689 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 + L L++ + L +L G E +++++ P E + + + S+ I + L Sbjct: 690 EVAEHLTLLIRPEDTLSRLGGDEYVILVANPGEEREVVLVAERILHHFSQPIALLDRELH 749 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 +G + + LL ++ A + + + ++ L Sbjct: 750 VGLSIGIAIHPADGKGPDELLTNADLAMYRAKAQGKN-TYERFSPHLHDRIRSRMELEGR 808 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL G+++ + QP + G + + DG ++P +F+P+ L Sbjct: 809 LRHALRHGEIVPHFQPRVDLATGRIVGAEALARWTLPDGTRISPGEFIPVAEDLGLIFDL 868 Query: 552 DLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 +L S L + + +VNL + ++ GR++ + + P+ + LE Sbjct: 869 GEHMLRSSLAFTRALMDEGLPDITMAVNLSLVQCRHADLVGRVLAALRDTGVPPERLELE 928 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE S+ ++ +++L G +A+DDFGTGY++ LK + +KID FV+D+ Sbjct: 929 ITESAIMSDVTRTLRRLDRLAALGITLAVDDFGTGYSSLYHLKHMPLHTLKIDQSFVRDL 988 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I ++ +A+ L V+AE VET Q L G + +QG+L P Sbjct: 989 PHVAGSRTIALTMLAMARNLDLDVIAEGVETGAQMHFLRDHGCRVVQGFLFSPAVPGD 1046 Score = 43.8 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 13/137 (9%), Positives = 25/137 (18%), Gaps = 12/137 (8%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVF 247 R R L A +LL LL + G Sbjct: 373 VATRTEELRVANEALHRSSTRFRALFDYAPDGLLLQRDDGTLLDCNRMAEATLGLSRHEL 432 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA--VLISFSVCL 305 + + + + + L + + + L Sbjct: 433 LALKARDICREGHALPVPESEDTPLRTRTELLR----GGVAFPAEVSVRSLDIEGERTLL 488 Query: 306 LYMVRIYHRSEWLNRRW 322 + + R R Sbjct: 489 VAL-RDISSRIHTEHRL 504 >UniRef50_A6X5M4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rhizobiales RepID=A6X5M4_OCHA4 Length = 786 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 106/740 (14%), Positives = 247/740 (33%), Gaps = 39/740 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 L + ++ F + ++ + S+ I + L V F Sbjct: 50 LAISALAGGLGVWATHFVAMLAYRGTVAIEFDFTITVLSAAIAVLGFWLSVRFLNGKAFK 109 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 + + + + + +S ++ A + +L I L + + + + Sbjct: 110 YVLIAAISATLSIAAMHFTGMSAIRAAADVHYDLPPILIGSIISILLLLAAFWFVM-NTA 168 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 W R+ + + + + + + + D I + + + A ++ Sbjct: 169 GWMRVLLPTVGGILAVCTLHFTAVASTELVPNPTLPAADPLGIGRLWLIGA--IAAVVSI 226 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + + + V + G + ++ + + + Sbjct: 227 VALTTIIAVFVDR---------YMTDLKGFANATLDGLAVVRDGGIVEMNARFSDLMRRS 277 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + L + A+ E + LA Sbjct: 278 EKALVGVAPDTLLLAADGLPVCASRPEAIEAAPRFPN-------DERIFELAVHTIEYQG 330 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQEAGKSFCC 354 +L + R R+ A D LT LPN E+ + Sbjct: 331 RPCEVLAV-RDLTEKRTAQRQIEHMARHDTLTDLPNRMFFEERLANAVARRSREPFAVLA 389 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ +G ++++ L + + ++ G E +++ G Sbjct: 390 LDLDRFKAVNDIFGHAEGDRVLKTVSSILKRSINGIDTAARIGGDEFIILQVGVPQPKGA 449 Query: 415 QHMVNILNSRQIHWNNTGL----DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + +G + + + + + ++ Sbjct: 450 RKLSEKILDT-FRSELNTVLDPTAVGVSIGVAVYPNDGKDAEAIRHAADIALYRAKTEGR 508 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + + + ++ + +R A+ +G + + QP+ + GY+ ++ Sbjct: 509 GM-VAFYSPEMDREIRERRQMEADLRHAMVRGQISIAYQPLFATADGSCTGYEALVRWNH 567 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 + G + P+ F+P+ + + VL + A +VNL P+ Sbjct: 568 PERGQIPPEVFVPIAEETGVIVPLGEWVLREACRTAAGWEK---HLTIAVNLSPVQFRLI 624 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ + + + + P + LE+TE + +++ + ++ K G RI +DDFGTGY+ Sbjct: 625 NLPDTVSSVLAQTGLDPTRLELEVTEAALMKDRLTTLELLRRMKKLGVRIVMDDFGTGYS 684 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+ D IKID F+ + T+ IVR+I L ++ L VVAE +ET Q + Sbjct: 685 SLSNLQSFPFDKIKIDRSFITSMETDVSARAIVRAIVGLGRSLDLPVVAEGIETFDQHRM 744 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 + + G + +QG+L GRP Sbjct: 745 VIEEGCEQVQGFLFGRPANA 764 >UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3I9_9PROT Length = 1123 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 116/572 (20%), Positives = 225/572 (39%), Gaps = 29/572 (5%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDF 238 F + +L E + L + +++ + Sbjct: 544 FLRFCQQAAEIISEMLLREHIRQALEESENKHRQLVETTPMGIVIYSNNKICYINPAAVT 603 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSLAFI 294 + G + + + + + TL Y + F + + + Sbjct: 604 MLGASGAGEILGQAVLSFIVPDDREAASADLHTLQQGGYVQPTEERFQRLDGSTFWGELR 663 Query: 295 LAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-- 351 + S + +++ + + L + +D LT LPN R EQ + Sbjct: 664 GVPVEYESQPAVQLLIQDISSRKEAQEQLRLLSYSDELTGLPNRRLYSDRVEQACSMARR 723 Query: 352 ------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 L +D + ++ G ++++ LL ++ ++ ++ G E ++L Sbjct: 724 RKRPISLLFLDLDRFKLINDTRGHACGDMVLKTVANRLLQTLRVSDTAARMGGDEFAVLL 783 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 E + + L ++ I N L +G F + E + LL Sbjct: 784 PETE-PDKALRVAGKLIAALNQPILIGNQELIIGASIGLASFPADGEDGETLLKHADSAM 842 Query: 463 EQSCAHHHVL-ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 + + ++ +++ L +++R A G L L+ Q + G Sbjct: 843 YYAKQ---NRLNIHCFSSVMEAVAQRRMQLEDSLRLAAGSGQLSLHYQSQHSLAEGTITG 899 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSV 577 + ++ + G ++P +F+PL + L + + P R S+ Sbjct: 900 MESLMRWHHPELGNISPGEFIPLAEETGLIRSITAWAITEASRQALVWEEAGIRPERISI 959 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L+Q+N+A I+ L + P+ + +EITE A + E+ + + +L + G I Sbjct: 960 NISAAELMQQNLASEILTLIRGSGAKPEWIEIEITETAAMNQPETGIGIMRELVEGGVSI 1019 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTGY++ LK+L AD +KID F++++ + DA+IVR+I +A A ++VVAE Sbjct: 1020 AIDDFGTGYSSLAYLKQLPADHLKIDIAFIRNLPDDAEDAVIVRTIIAMAHALGMTVVAE 1079 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VETQ Q L + G +QGYL+G+P P + Sbjct: 1080 GVETQAQLDFLRQEGCDGIQGYLLGKPLPADE 1111 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 109/560 (19%), Positives = 208/560 (37%), Gaps = 27/560 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLV 244 ++S + E+R ++ +V L + + + G Sbjct: 244 VISIARDITAQNITENLLIESEQRYKSIFQYNVDAVTTLNTAGELYYSNPAAEQLFGCDR 303 Query: 245 PVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV--LIS 300 + + + R PF + + + L + Sbjct: 304 SELIKEPFSSFIIAEEREPFHEKMTMTLEGTPHQHETAITNTRGEKRYVHLTLIPTFINK 363 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSF 352 + + + S+ + A D LT LPN +Q S Sbjct: 364 EVTGVHCIAKDITESKQSEEKISFLAYHDTLTTLPNQYKFQQDLNTLIARSSIKPKPFSI 423 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D +F++ + G + + + + L+ E+ KLY+ G E ++ T Sbjct: 424 FTIDLDRFKFINDYLGYDLGNELLTKVGTRISELLSEDAKLYRYGGDEFTIIHLD-ATPE 482 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + N + S + + + + L L+ + + Sbjct: 483 ESLQLGNKIASAISMAFDISGFDAFITVSIGISHHPDHGKDLNTLIKKSDNAMYFAKKMG 542 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + E ++ +TK + L + + AL++ + LL+ QP + G + ++ Sbjct: 543 RN-NVQMFNEEINTLSTKNLKLESLLYKALERDEFLLHYQPQYDAKTNRISGVEALIRWD 601 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL 585 + G+++P F+PL + L V+ + + SVNL Sbjct: 602 NEELGMISPADFIPLAEETGLIVPIGEWVMRTACHQNKAWQDEGLPPMVMSVNLSIRQFY 661 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q ++ I ++ + ++P+ + LEITE A +A+S++ ++QL + G RIAIDDFGTG Sbjct: 662 QPDLPQVIGKILEESGMAPELLELEITESMAM-HADSAISILKQLKQLGVRIAIDDFGTG 720 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 +++ LK+ D +KID FV DI + + IV++I LA +L VVAE VE QQ Sbjct: 721 FSSLNHLKKFPLDHLKIDRSFVDDICLGSEEQDIVKTIIMLAHNLNLRVVAEGVENDLQQ 780 Query: 706 ALLHKLGVQYLQGYLIGRPQ 725 L QG+ +P Sbjct: 781 QFLKDHRCDVFQGFHFSKPV 800 Score = 41.9 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 8/146 (5%), Positives = 21/146 (14%), Gaps = 8/146 (5%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGK-EKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + R + Q+L R + L Sbjct: 119 FILSVVRDLSGRSSNQMLHERTSKEFESLYLHNPDLIFSTDPLGNF---TNMNPACSATL 175 Query: 241 GYLVPVF--FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + ++ + + L + Sbjct: 176 EYSKQELMKLPYDEILDVAHINKTVDQFSKALKGQTVTFTATVRTKSGRPVDLNITSLPI 235 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRW 322 ++ + R Sbjct: 236 LVEDQVEGVISIARDITAQNITENLL 261 >UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P569_9PROT Length = 751 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 122/728 (16%), Positives = 239/728 (32%), Gaps = 40/728 (5%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 L+ I+ F+ W M I FG+ G+ VL + + Sbjct: 25 LNSVFLLAGIVAFGMGFIRWQTSVAMGEID--FGFAGLCFVLLAYLRRHRSQADMFASIV 82 Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 V+ + + + +L + + ++ R+ G +++ + Sbjct: 83 LVLCYGLFLSIYISASYNTMRLSLFFLLAAAAFFLKGRI--------AGRIWLAFILLTI 134 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 + + +F + + A+ I + + Q L R Sbjct: 135 --VIVHVLPYFETGYSHIDIFTTCLYLLALFIIFENYETFKESQHTSEEEQALLRLTEER 192 Query: 207 SLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + W Y + + +F II ++R Sbjct: 193 WRHALEGTGDAVWDWRPETGEFHYSRRFSEMLGYAEGELGKHAEHIFNIIHPDDEPRVRD 252 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC----LLYMVRIYHRSE 316 + + + V ++ + Sbjct: 253 ELHDFIQ--RRAGNYVSEMRLSARDGSWKWMLCRGKVAQRDDEHSAGLMVGTFSDITLLK 310 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYG 368 R+ A D LT +PN L +Q + C L +D + ++ G Sbjct: 311 QHERQLEHIAHYDALTGIPNRVLLADRLQQALAHSKREGTILAVCYLDLDGFKLVNDTMG 370 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 + + + + ++ ++ + +L G E ++L G +N L S+ Sbjct: 371 HEAGDKVLIEVTQRIKKSIRGDDTVARLGGDEFAVLLLGLHAPEECSASLNRLLEEISQP 430 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 I N ++ + G+ LL + + + Sbjct: 431 IEIKNRLFEVSASIGVSIYPGDDHDADTLLRHADQAMYTAKQSGKNRYY-LYDTENDQRA 489 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 L + AL + + LY QP + + G + ++ + G++ P FL I Sbjct: 490 RSHHEFLRRLALALGRNEFELYYQPKVDMRTLQLVGAEALIRWHHPERGLLAPGDFLHAI 549 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR-LFKRYH 601 L V+ + L L S+N+ L + A ++ R + + H Sbjct: 550 EGTTLEVELGDWVVATALAQLEAWHEAGLPMELSINISVRHLQANDFAWKLKRKMLRYSH 609 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + +E+ E A + IE+ K G A+DDFGTGY++ L RL D +K Sbjct: 610 LPKGCLQVEVLETAALEDIPRVSDTIERCRKIGISFALDDFGTGYSSLSYLGRLPVDALK 669 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F++D++ + D IV+ + LAK + +VAE VE+++ L ++G +Y QGY I Sbjct: 670 IDQSFIRDMLKDKGDRAIVQGVIALAKVFNRKIVAEGVESEELFRDLVEMGCEYGQGYGI 729 Query: 722 GRPQPLAD 729 RP P ++ Sbjct: 730 ARPMPASE 737 >UniRef50_A5V028 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A5V028_ROSS1 Length = 892 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 105/659 (15%), Positives = 206/659 (31%), Gaps = 41/659 (6%) Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF-PLKISTFFGDADA 162 + L +T + L V + + + + + D DA Sbjct: 232 VAHTLFGDRLLDVTPQATAPALLDTDGVPCATDQLPLAIALRGVEVDSSEFLLASVDPDA 291 Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + + + + R I + E+R Sbjct: 292 VRRIRATARPLRDSNGDIIGSVAIFRDITVSF-------QMAQALRASEERYTLTVQATG 344 Query: 223 LSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW------AVST 271 V L T + G+ + + ++ + Sbjct: 345 DGVWEWELRTGIMTFSRRWKEMLGFQDQEIGNLPSEWFNRVHPDDRDGLDVRLTAYLRRL 404 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + L + + + ++ + +R A Sbjct: 405 ITSFEHEYRILHRDGAYRWMRCRGIAIWDADGNAAHIVGSQTDITDRKLAEQRLWYNAFH 464 Query: 329 DPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT L N + L +D + ++ G ++ + +I Sbjct: 465 DSLTGLANRARFMDRLGHVIARARRSASPPYAVLILDLDRFKLINDSLGHLVGDQLLIAI 524 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMG 436 R L ++ + L L G E ++L ++ + H N + Sbjct: 525 ARRLEQSLRPGDTLAHLGGDEFAVLLEDLSEPHAAVNVAERILHLFEEPFHLNEHEVFSS 584 Query: 437 YGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 D + +L + + + ++ + + Sbjct: 585 ASIGIALSDNLRYHSPSDMLRDADTAMHHAKMEGRAR-YAVFHPTMHDRARPRLQIEIDL 643 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R +++ + + QPI + G++ +L GI+TP +F+ + + L Sbjct: 644 RRGIERNEFFVVYQPIVELSTQRTVGFEALLRWRHPQRGIVTPAEFIAIAEETGLIVPIG 703 Query: 553 LQVLESLLKWLATHPCDKKGPRFS--VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + L+ + +NL P + ++ R L Y + A+ LE Sbjct: 704 QMVLREACRQLSAWKQRHPERTLAMNINLSPRQIADPDLVHRTAALIDEYRLDADALRLE 763 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE + +++ ++QL G +I IDDFGTGY++ L R IKID FV I Sbjct: 764 ITETAIIEHGDAAGRVLQQLRALGVQICIDDFGTGYSSLSYLHRFPIATIKIDRSFVSQI 823 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + IVRSI LA++ ++V+AE ET++Q L + Y QG+L A+ Sbjct: 824 HRSHENTEIVRSIISLARSLGMAVIAEGTETEEQLLRLRSMSCAYGQGWLFAHALEPAE 882 >UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Bacillus sp. SG-1 RepID=A6CIZ8_9BACI Length = 988 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 101/563 (17%), Positives = 203/563 (36%), Gaps = 26/563 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I + L W + + I GY F Sbjct: 264 DITEQKIIEDKLAETERQVLKISNSLDVGIWSM-DVKKNQYIFVSKGFETICGYSAEDFK 322 Query: 249 IIFTLGVG----KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISF 301 + + F A+ T + + + Sbjct: 323 QGLLQWEDLIYCEDLHLFEQRKEALHTGKVPKQQYRIVHKNGNTKWVQDELITTFNTKGD 382 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 V + ++ + + + A D LT LPN R EQ ++ Sbjct: 383 LVRIEGILSDITEQKEAEEKVNYIAHHDYLTDLPNRRKFEQELQKFIEQSKMANQEFGVM 442 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + + I LL + +N+ + ++ G E +++ + + Sbjct: 443 YIDMDGFKRVNDTLGHAIGDKLLVEISTRLLDCVPQNDFVARIGGDEFSVLIDKMHSLEQ 502 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + L + + + Q +L + ++ Sbjct: 503 STTIAKKIVAALEVPYKIHGYELFVTASVGVAAYPQDGHDAQTILQKADKALYRAKEMGK 562 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLK 527 ++ + K L N +R A+ +L + QP + + G + ++ Sbjct: 563 N-NYQIYNSSMNIEAYKLYSLENDLRRAVKNKELYFHYQPKVDAQTEKLVGAEALIRWEH 621 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQ 586 + G ++P +F+PL + +L + +++ + S+N+ P ++ Sbjct: 622 PEWGQVSPAEFIPLAEENDLIFKVTSWTFQTICTQIKNWTDRNLPLVPISINVSPKIFIK 681 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +I + ++ P+ + LEITE+ N ES IE+L + G +I++DDFGTGY Sbjct: 682 NEWQEELIYIINNSNVDPRLIELEITEQALIKNEESFSAGIEKLKQLGVKISLDDFGTGY 741 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+ + D +KID FV DI+ I ++I ++A ++V+AE VET+ QQ+ Sbjct: 742 SSLLYLKKFKLDTVKIDKSFVDDILKGKP--TITKAIINMAHEFDMTVIAEGVETRAQQS 799 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K +QGYL +P D Sbjct: 800 FLQKQDCDQIQGYLYSKPILPED 822 Score = 43.4 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 13/147 (8%), Positives = 33/147 (22%), Gaps = 12/147 (8%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT------PYENDFIAGY 242 +I + E R T LA + + + + Sbjct: 130 IISGVITDISALAIQKEHAESLEIRLNTAQQLADIGTWEYDIANDECSLSYKSYEMLGMP 189 Query: 243 ---LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 ++ T A++ + ++ E LA V++ Sbjct: 190 YGITPTFQMLLETAHPEDKDIFLNEFVSALNEKRNFHCQNRIIRSDGAERILAHFGEVIL 249 Query: 300 SFS---VCLLYMVRIYHRSEWLNRRWH 323 + V + + + + Sbjct: 250 DDNQKPVKYIGTTYDITEQKIIEDKLA 276 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 106/614 (17%), Positives = 202/614 (32%), Gaps = 32/614 (5%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 + DL + T + L L+ I +++ Sbjct: 145 IATTQAVLHFGLRHSELNRRAWQDLQQILTMAFLALCLGAALSCQIAHVTTSEVE--EAT 202 Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + + + + +L ++ G + G Sbjct: 203 IGLYRERRFLQAVIDGVVDPIRVLNTNKEIIMLNRSAQTELGNEDCLGEKCRECDNGNDN 262 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVE---TEYSLAFILAVLISFSVCLLYMVRIYHRSE 316 V + E + Y + + ++ R Sbjct: 263 NDNECPFETVRRTQQPVRILQHRRDKEDTLSIYEIEASPLINNGQFDGMVSTARNITDRL 322 Query: 317 WLNR-------RWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEF 362 L R + D LT LPN Q + +D Sbjct: 323 RLEASLDEKESRLLYMSNHDLLTNLPNRVLFRNRLNQAIARNHEGNHVVLLFIGLDRFTK 382 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + + + EN+ L +L G E +++ L Sbjct: 383 INESLGREIGDNTLTQAAERFHNCLAENQILARLGGDEFAVIMEDCRHPQDAAKTAKKLL 442 Query: 423 SR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + IH + + + + E+ + L+ ++ + E Sbjct: 443 EQLIEPIHVQPNEIYLTASIGISSYPQDGESPKTLMSHADIAMTRAKSEGKDR-YQFFER 501 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 ++ T + L N +R A+ + +L +Y QP +++ G + ++ G+++P Sbjct: 502 EMTQTTKRVFELENDLRKAVARNELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPA 561 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIR 595 F+PL + L VL + +A +VNL PL K + + + Sbjct: 562 DFIPLAEETGLIVSIGEWVLRQACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAK 621 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 K I+P + LE+TE + + S + +L + G +AIDDFGTGY++ L+ Sbjct: 622 TLKETGINPACLELEVTESMIMDSIDKSTATMIELTELGAGLAIDDFGTGYSSLSYLRYF 681 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +KID F++ + ++ DA + S+ LA + +L VVAE +E + Q L K Sbjct: 682 PLTKLKIDKSFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQ 741 Query: 716 LQGYLIGRPQPLAD 729 QG+L RP P D Sbjct: 742 GQGFLFSRPVPAED 755 >UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=30 Tax=Burkholderiaceae RepID=B2UGH6_RALPJ Length = 917 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 104/581 (17%), Positives = 198/581 (34%), Gaps = 39/581 (6%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 L I + E+R +++ + + Sbjct: 325 GLLDGITDIIGVAVQKAHIARDLRESEERYRLAVDNLTEGIVVQTADGTILACNPSARRI 384 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG---------------VETEY 289 + +G L +L S + + + Sbjct: 385 LRAGSVSPVGTSHLALMRRSLREDGSEIPVNERPTRVVLATGRPLLGLTVGLELVDGDVV 444 Query: 290 SLAFILAVL----ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + + + + +L + ++ A D LT L N Q + Sbjct: 445 WVHENVLPIVRPGDNTPSAVLISFNDIGPARAAQQQLTFLAQRDALTGLYNRAYFSQRMQ 504 Query: 346 -----------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + L +D + ++ G H +R + + L +++++ L Sbjct: 505 AVMEQAASQANEGHQVAVLFLDLDGFKKVNDTAGHEAGDHLLRIVAQRLSACVRQSDTLA 564 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E +++L + G + + + ++ + T +G + + Sbjct: 565 RLGGDEFVVLLDNVRSLGEAERLAKRIVHSIAQPFSTSGTEYYLGASIGIALYPEHGNDA 624 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL + + +S + ++ L +R AL G+L L QPI Sbjct: 625 ATLLRCADAAMYNAKQNGRNQ-HRVYTARLSQRAQRRFQLEYHLRRALTAGELSLRFQPI 683 Query: 512 RNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L + G ++P +F+P+ L VL + A Sbjct: 684 VDATSMDIVGAEVLLRWHSTELGEVSPAEFIPVAEDAGLIGDIGEWVLAQACRQAAHWRA 743 Query: 569 D-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 +VNL P + + I R + A+ +EITE + + M + Sbjct: 744 TCMPEFFVAVNLSPRQFG-EGLVPTISRCLTEAGLPASALEMEITEGLLMRDTAAVMPML 802 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + L G RI+IDDFGTGY++ L+R D +K+D FV I + +I R++ +A Sbjct: 803 DALTALGIRISIDDFGTGYSSLSYLQRFPIDNLKVDRSFVSGIPRHRDSVVISRAVVAMA 862 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + ++V AE VET +Q L G LQG+L G P A Sbjct: 863 ASLDMTVTAEGVETLEQAEFLQAAGCDKLQGFLFGPPMTAA 903 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 11/133 (8%), Positives = 31/133 (23%), Gaps = 10/133 (7%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + P + R L ++ ++ + L +G + Sbjct: 29 QDSRRPLPLADDRYEALVRQMPDALYIVADDIIVFVNEAGVRLFGAQTARDIVGHELDEF 88 Query: 261 PFLNLTWAVSTLCLL---------NYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVR 310 N Q L+ T + + A + + + + + R Sbjct: 89 VHDNSMHLARQRREWMVSHGAGLPPVEQTLLRCDGTPVEVEVLSAPVQLGWRTAIQVVAR 148 Query: 311 IYHRSEWLNRRWH 323 + + + Sbjct: 149 DITQRKQAEQALR 161 >UniRef50_Q21IJ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21IJ5_SACD2 Length = 820 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 115/650 (17%), Positives = 229/650 (35%), Gaps = 45/650 (6%) Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 + GL+ + +++ + I L I+ Sbjct: 152 QSSAVVIAFGLIRSSLLVFFLFIAFYYLLTKPLIQIALQVKQINPGSPGEQRLSRPAGIH 211 Query: 180 NMLFYYLT----RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 + L +++ + A R E+ + + V Y Sbjct: 212 DDELTQLVASTNQLLDAVDLALAKRRAVEVVLRKSEEHVRQIIDSLPVWVGARNKDGHYI 271 Query: 236 N-------------DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 D + G + F F ++ + + + + + ++ Sbjct: 272 FANQALADFLHTKPDAMRGSHISDFAEFFVTDPQQIIDLDAEVIKSRISAQIW--EEKWI 329 Query: 283 QGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 E + + + V L+ + + + A D LT LPN L Sbjct: 330 TNDGEERDMHTHVMPMEFYDEVVSLV-VSSDITELKRTQAQMEHMAYHDALTDLPNRSYL 388 Query: 341 EQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + E+E + + +D ++++ G ++ + + L + +EN+ Sbjct: 389 VERLEEEVRKANHGQYYGALLFIDLDQFKYINDSLGHPAGDGVLKHVAQRLTAVTKENDL 448 Query: 393 LYQLPGSELLLVLSGPETE--------GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRF 444 + +L G E ++VL+ E + + S +N+ L + + Sbjct: 449 VVRLGGDEFVVVLTNLGDELPTSILRAEDIGERLRRYISEPHFYNDLQLHVTCSVGIVMY 508 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + LL Q A+ + ++ + +++ + AL+Q Sbjct: 509 PEEDAGVHELLRYADTAMYQVKEQGRD-AIQFFNKYMADKARNVLVMEGDLHKALEQHRF 567 Query: 505 LLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LY QP + + G + +L D G+++P +F+P++ L VLE ++ Sbjct: 568 SLYYQPRVDVTTSQIVGAEALLRWEHPDRGMISPAEFIPILETSGLIVEVGRWVLEDSIR 627 Query: 562 WLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + R VN+ P + ++ + I+P + +EITE Sbjct: 628 QVKIWQEQGIWKDDMRLGVNISPRQFRSSEFVNDVTKILQEVGINPSLIEMEITEGIVIH 687 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N E ++ + L + G A+DDFGTGY++ LK+L I+K+D FV+DI + D + Sbjct: 688 NLEETVATMSSLCELGINFALDDFGTGYSSISYLKQLPVAILKVDQSFVRDITFDRNDRV 747 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +V +I+ + L VVAE VET Q L+ + +Y QGYL P Sbjct: 748 LVETISAMGNMLGLDVVAEGVETCDQLHLVREYNCKYYQGYLCSPPVNAD 797 >UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1H8_9RHOB Length = 944 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 104/636 (16%), Positives = 213/636 (33%), Gaps = 39/636 (6%) Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG-----DADAIFTVVDLLSLFTAVLIYN 180 L + S + ++ + ++ + +V+ Sbjct: 297 IALVAFAGVAYLMSRQITRPLTKITRVLTGIAAGDFESEVVGTGRQDEVGDIARSVVSLQ 356 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + H + R A + + + + Sbjct: 357 RSVKERDALREHVHEKNSILRSQEAQLREQNVLFDAALNNMSHGLCMYD--ANGRLIVSN 414 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN---YNQNF---LQGVETEYSLAFI 294 +F + + L V + + Y ++ + Sbjct: 415 QRYAELFQLEPGKVKPGMTAAQLATLQKVEAVETGDSALYESRLPDHRYASGSQSTEMVK 474 Query: 295 LAVLI--------SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE- 345 ++ + + + R A D LT LPN + Sbjct: 475 ISSGRIVLTTRQPLAEGGWVAISEDITERQEARDRLAFLARHDLLTQLPNRIEFRDQLDM 534 Query: 346 -------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + CL +D + ++ G + +R + L L+ + + +L G Sbjct: 535 LLNQQMVKGGEFAILCLDLDEFKTVNDSLGHPIGDELLRQVAERLRKLIGRKDVVVRLGG 594 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++ P ++ + + S+ + + +G + L Sbjct: 595 DEFAILTGLPSRLKDVEELAQSVIWEISQPFQITDHEIVIGVSIGITIARADGTAGDELF 654 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 Q ++ E + + L+ +RTA+ G+L LY QP Sbjct: 655 KQADLALYRAKEDGRN-TYRFFETDMGTAVNDRRELITDLRTAVANGELELYFQPQYTLA 713 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + G++ ++ G+++P F+PL L ++ VL + A P Sbjct: 714 DDRISGFEALVRWNHPKRGMVSPADFIPLAEDTGLISQLGEWVLMEACRIAAKWPD---H 770 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R +VNL P L +I + + + LE+TE +++E + ++ Q Sbjct: 771 LRVAVNLSPRQLRGHAFGPVLIDALVQTGLKADRLELEVTESVLLTDSEDVLDSLHQAKS 830 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++++DDFGTGY++ L+R D IKID FV+ + + IV+++ +LA ++ Sbjct: 831 LGVKVSMDDFGTGYSSLSYLRRFPFDKIKIDQSFVRSMAYSDDSISIVKAVIELANNLNM 890 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + AE VET+Q +L ++G QGY +GRP P+ Sbjct: 891 TTTAEGVETRQLLDMLTEIGCTEAQGYYLGRPMPVD 926 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 88/584 (15%), Positives = 183/584 (31%), Gaps = 30/584 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL--SWLAALSVLLLLL-- 230 L L R+ A + +E+ +++ Sbjct: 225 GALFPVSLVSTPLRVNDRITGAVTAFHDISDRKKVEERLLLAAKVIETTTEGIMITDAGG 284 Query: 231 ---CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 GY + + A+ + Sbjct: 285 VIESVNPAFCRSTGYSESEAIGNSPRILKSGRHDGEFYRKMWKALLETGQWQGEIWNRRK 344 Query: 285 VETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 Y+ ++ + + + + R QA D LT LPN Sbjct: 345 SGELYAAWLTISAIKDSHGRTTQYAAIFSDITEDKRNQERIKHQAYHDALTDLPNRLLFI 404 Query: 342 QAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 Q + L +D + ++ YG + ++ + L +++++ + Sbjct: 405 DRLTQAIAQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLLLQGVAGRLRRAVRDSDTV 464 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT-GLDMGYGAAWGRFDGNQE 449 +L G E ++L + + + + + + + + E Sbjct: 465 ARLGGDEFTILLPQIGSVEDAAKVAQKILASLRQPWSFEGIPSFCITTSIGIAVCPTDGE 524 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L+ ++ A ++ +++ + +R ALDQG+ +LY Q Sbjct: 525 EAETLMHNADAAMYRAKAQGRNH-YQLYTPELNAWAFERLAMETRLRRALDQGEFVLYYQ 583 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + ++ D G+++P +FL L L LE Sbjct: 584 PKVEAATGNWCAVEALIRWQHPDLGLVSPTEFLRLAEDTGLIVPIGEWCLEEACVRNKAW 643 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R +VNL N+ + + ++ + P + LEI+EE A+ + Sbjct: 644 QDAGLPPVRMAVNLSARQFQHPNLLAAVEKALQKSGLPPAWLELEISEEVILRFADLAPI 703 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L G + +D +G + L++L D +KI V D+ V+++ Sbjct: 704 VLGDLKSLGLSLTMDQYGKRDSRITLLQKLPIDRVKIAASQVIDLSACHDARKSVKALIA 763 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA++ L V A+ V T++Q L G +QG+L P + Sbjct: 764 LARSLDLHVAADGVGTREQCDFLTAAGCDEIQGHLFSDPLSAEE 807 Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 13/237 (5%), Positives = 53/237 (22%), Gaps = 18/237 (7%) Query: 102 AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDAD 161 + + + ++ P+ + L P Sbjct: 29 GYAVIEAEDGAAALEAYEQAEPDIVLMDVLMPVLDGFA--LCAQLQTLPRHRRAPVLMIT 86 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 + + + + + ++ + + +E + ++ Sbjct: 87 GLDDDASVEKAYQSGATDYITKPIQWAVLRQRVRRLLQAQHTEKALKARETQLSAVASAL 146 Query: 222 ALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLN--------LTWA 268 +++L E + + G+ +P + R P + + Sbjct: 147 GEGLIVLDAEGRLTFMNPEAERLLGWSLPELLGKKIHSIIHNRRPEGDPIAEADCLVLKT 206 Query: 269 VSTLCLLNY-NQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRW 322 + + F + + ++ + L + + + R Sbjct: 207 IGAGETYRSDEEYFTRKDGALFPVSLVSTPLRVNDRITGAVTAFHDISDRKKVEERL 263 >UniRef50_Q2SDR7 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDR7_HAHCH Length = 636 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 92/610 (15%), Positives = 196/610 (32%), Gaps = 28/610 (4%) Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 D P + DA + + LT+ Sbjct: 12 LLPADLPAERLRALLDAIDAAYIQADEERSMLERALELSSQELTKRNQELKQQLQEISTT 71 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-ENDFIAGYLVPVFFIIFTLGVGKLRYPF 262 +++ + + + + + P+ Sbjct: 72 KQELENSVSLLNATLNSTCDGIIVFDQDNRVIACNNVFLKMFDMRQEVAENINKHHIRPY 131 Query: 263 LN-----------LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRI 311 L L + + + ++ + Sbjct: 132 LREKVKNLDELTRLWEFNKRFNQRSSYCLLEMKDGRFIDCYTNPRIHEGKVLGRVWSLSD 191 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFM 363 + ++ + D LT LPN + + L +D + + Sbjct: 192 ITELKLSEQQALFHSYHDNLTGLPNRTLFHERLTHAIERRGVQQRDLAVMFLDLDGFKDI 251 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-- 421 + GL ++ + + + + + G E +++L +T + L Sbjct: 252 NDSTGLETGDQLLQMAAQRIKETLPPETTVARYGGDEFIVLLENIKTSFEATLVSERLRS 311 Query: 422 -NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 R ++ + + + L+ + + + + Sbjct: 312 AIDRPFTVDDQTFHLTCSIGIALYPTDSRDADALIRKADMAMNHAKSRGRNNC-QFFADE 370 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 T+ ++ + N +++AL++ + L QP G + ++ + G +++P + Sbjct: 371 FEILTSHRLRIRNNLKSALEKNEFNLLYQPKIALHSNMIIGVEALIRWRRPSGEVVSPAE 430 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+P + L V E K L + ++N+ P +I I + Sbjct: 431 FIPAAEENGLIIDIGNWVTEEACKQLQRWGRENHHNFSVAINISPFHFQHADILSTITQA 490 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +RY + P+ + +E+TE + E ++ + +L K G ++DDFG GY++ LKRL Sbjct: 491 LRRYSVRPELLEIELTESALMEDIEHTIEILAELRKLGISCSVDDFGAGYSSLNYLKRLP 550 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID +F+ DI + D +V ++ +LA + VVAE VET++ LL + Sbjct: 551 VDTLKIDKMFIDDITKSQRDLALVDTMINLAHHLDMLVVAEGVETEETVHLLKEKRCDLA 610 Query: 717 QGYLIGRPQP 726 QGY RP Sbjct: 611 QGYYFSRPVS 620 >UniRef50_B3E7H1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E7H1_GEOLS Length = 933 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 107/659 (16%), Positives = 205/659 (31%), Gaps = 41/659 (6%) Query: 103 ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLK-ISTFFGDAD 161 + R L+ + + PL +++ + Sbjct: 267 WVLAASYPETDAYAPVRTARTWFIIATLLGMAVAVLLVLFMMRLLTRPLAQLASHVAELP 326 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 + L + + + + + + E+R ++ Sbjct: 327 EKRGAERFIHL--------PVNGEIGNLTGAFNSMVEEIDQSTQALRNSEQRYRIVTEFT 378 Query: 222 ALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 + GY F +L + + ++ Sbjct: 379 NDFTYWRRPDGSFEFISPACLEVTGYSREELFAQPSLMEEMIHPGDREMFDRMAAESGEE 438 Query: 277 Y-------NQNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQA 326 + + ++ + L + L + Sbjct: 439 INCNNEELEYRIITKGGNTRWVRHTCRPIVDENGVFLGRRGCRSDITEHKQLADQVSHMV 498 Query: 327 LTDPLTLLPNFRALEQAP----EQEAGK-----SFCCLRIDNLEFMSRHYGLMMRVHCIR 377 L D LT LPN Q ID + ++ G + Sbjct: 499 LHDLLTGLPNRSLFADRLFLATAQRERGDHDLTVVLFFGIDRFKLINDTLGHETGDRLLI 558 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLD 434 + L L+ N+ L + G +L G E+ M + + + + + Sbjct: 559 MVAERLRKLLHPNDTLCRFGGDVFAFILPGRESRHEAVTMSYRVLASLADPFNPSGQQVT 618 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + + L + + ++ Q + + L N+ Sbjct: 619 LSGSIGIAISPQDGTDAETLQKNAETAMYDAKRSGKN-SFRFYAREMNAQAAEMLRLDNS 677 Query: 495 IRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 + L GD L+ QP N E + +L + G++ PD+F+PL + + Sbjct: 678 MPQGLVNGDFYLHYQPQLNLEDNSVVAVEALLRWRHPELGMIPPDRFIPLAEESGFIIKL 737 Query: 552 DLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + A D R +VN+ + + + +SP+ + LE Sbjct: 738 GEWVLRTACAQCAAWQQDGPAPLRIAVNVSGCQFNEPDFVDMVSTALSSSGLSPEYLELE 797 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE SN + ++ ++ L G +AIDDFGTGY++ LK D +KID F+ DI Sbjct: 798 LTESLLISNEQQALQKLQLLKSMGIYLAIDDFGTGYSSLAYLKHFPLDRLKIDKSFINDI 857 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +T+ DA I +I + + L V+AE VET++Q L G +QGY + +P D Sbjct: 858 LTDPDDAAITEAIIAMGHSLKLKVIAEGVETREQLLFLEDRGCDEMQGYYLSKPLSEHD 916 >UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C313CD Length = 763 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 119/728 (16%), Positives = 242/728 (33%), Gaps = 47/728 (6%) Query: 29 RFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAV 88 I A + + ++F + ++L V LC + Sbjct: 41 LLILLWAHVPALFVFALATGNPLQHALL-----EVVPIALCALVGQREQLGRRGRAAAVT 95 Query: 89 MLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFD 148 + VL + + + + ++ W + G + + + Sbjct: 96 IGLLTCSAVLVHLWDGTIEAHFHYFVMVVALAAYEE--WFPYLLAFGYVVLQHGLMGMME 153 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 + D + + + F A L + + + A Sbjct: 154 PDSVYAHGTDDDRSPWFWAAIHGGFIAALGFASMVTW------------RANESVRAHLA 201 Query: 209 GKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 E+R A + + L+ L + GY + + Sbjct: 202 ASEQRFHRAFDDAPIGMALIGLDGRFREVNRSLASLTGYGAGKLVQLRLWDLSPADVRAE 261 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNR 320 + + + Q F + T + +++ S + + + + Sbjct: 262 DHAAWPPSAGMEAVEQRFQRADGTIGWGLWRYSLVQDESGIASHWVVQLLDVTSRKQFEQ 321 Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 + QA DPLT LPN L + E ++G + + +DN + ++ G Sbjct: 322 QLAHQAHHDPLTGLPNRALLTKRLQEALDLAREHDSGVAVIFVDLDNFKVINDSLGHDAG 381 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN 429 +R++ L +++ + L + G EL + L + + + + Sbjct: 382 DRLLRNVSERLRRVLRPEDLLARFGGDELAVCLERVADTEPANRIADRMATALRAPFVLD 441 Query: 430 NTGLDMGYGAAWGRF-DGN-QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + + LL ++ + + + + Sbjct: 442 GEQRFVTASFGIALARPEDPDRSPDTLLRDADAAMYRAKERGKART-EIFDASMRRRAVD 500 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L + +R AL + L + QP + + +L G ++P +F+P+ Q Sbjct: 501 RLELESGLREALARNQLRVVYQPEVSLESGRIVAVEALLRWEHPQHGPISPARFIPIAEQ 560 Query: 545 FNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L VL + A + G +VNL L ++ + + Sbjct: 561 SGLIVPIGAWVLREACRQAAHWNAESGGDGVVVAVNLSVRQLGASDLEATVRGAIDGARL 620 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR-LQADIIK 661 + LEITE ++ +++ +++ L + G ++AIDDFG GY++ L+ L D++K Sbjct: 621 PADRLCLEITESAVMADPAAAIESLQTLKRVGVKLAIDDFGVGYSSLSHLRELLPIDVLK 680 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ +V D IV +I LA++ + VAE VET Q A L + QG+ Sbjct: 681 IDRSFIDGVVLREEDRAIVTAIVQLARSLGVDAVAEGVETSDQAAALRAMHCPIAQGFHF 740 Query: 722 GRPQPLAD 729 RPQP AD Sbjct: 741 ARPQPPAD 748 >UniRef50_A3YAL9 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YAL9_9GAMM Length = 1003 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 98/604 (16%), Positives = 208/604 (34%), Gaps = 48/604 (7%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 +S + F L R I A+ R ++ T + Sbjct: 391 WFELSVSYSISSDYNRPCFVALARDISRRKKAESELRIAATAFETQDGILITDTQH---- 446 Query: 225 VLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 ++ I GY I F + + Sbjct: 447 ---KIVRVNTAFQKITGYQEAEILDQNISLLRSGRHDEIFFQKIFACIDDCGYWEGEIWN 503 Query: 282 LQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + ++ + + + +Y+++ ++ + + + D LT LPN + Sbjct: 504 RKKCGEIVPELTTISTVYNDLKIPINYVYIIKDISLTKQNEQLINQLSYYDSLTCLPNRK 563 Query: 339 ALEQAPEQ---------------EA-----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 + + EQ + + +D+ + ++ G + ++ Sbjct: 564 MISEKVEQLIKQAQHQSLTVNTSGHYLPLIRHALLFIDLDHFKNINDSKGYSVGDKLLQE 623 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPE---TEGRLQHMVNIL-------NSRQIHW 428 + L+ ++ + + + G E +L+L G + GR + + ++ Sbjct: 624 VAHRLIDTVRSTDIVARFGGDEFILLLEGVDVSLDAGRALYRAKKVSCLINDALAQVFEI 683 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N + D + + + ++ + + + ++ Sbjct: 684 NGEHFYISSSVGITEIDESVDEVFDAFKHAELAMYEAKSSGRNR-YCFYSPQMQEKILER 742 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 V L +R AL + + LLY QP + G + ++ D GI++P +F+PL Sbjct: 743 VNLETAMRKALIKDEFLLYYQPQFDDLGVLRGVEALIRWHHPDKGIISPMQFIPLAEDSK 802 Query: 547 LSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L V+ LA D + SVN+ + Q + + + S Sbjct: 803 LIIPIGEWVVREACNTLARWRDDPLLSQVKVSVNVSVIQFAQDDFVDLVRLILVETGASA 862 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + E+TE + + + ++ L G +++DDFGTGY++ L++L D +KID Sbjct: 863 KLLQFELTESMLIDDKANILAKMQGLKALGVLLSLDDFGTGYSSLSYLQQLPFDQLKIDQ 922 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+++ + +IT + + L V+AE +E ++ L G QGY +G P Sbjct: 923 SFVRNLNGQGDQHPLALTITTMGHSLGLEVIAEGIEEKESLLKLQSFGCNLFQGYFMGHP 982 Query: 725 QPLA 728 PL+ Sbjct: 983 MPLS 986 >UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=B1J7P7_PSEPW Length = 699 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 119/579 (20%), Positives = 214/579 (36%), Gaps = 36/579 (6%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLG-------KEKRAFTLSWLAALSVLLLLL----- 230 F +TR I ++ + + + ++ SV++ L Sbjct: 115 FAKVTRDISERRQQELELLQAKELAEQYSQEMTKLSQFLDSVIANIPASVIVQDLESQRI 174 Query: 231 --CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF--LNLTWAVSTLCLLNYNQNFLQGVE 286 G + + + + L Sbjct: 175 LLANQQAERLFGGRGRSMIGRLPGECLAPAAADYLEQQLARGARNPKGYAAETCVDTACG 234 Query: 287 --TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 T S A + + +L++ + + H A D LT LPN + Sbjct: 235 PRTLRSRALLSQNREGQADYVLFVAEDATEELAAHAQIHHMAHHDALTGLPNRTLFNERL 294 Query: 345 EQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 +Q + CL +DN + ++ G +R++ + L ++E + L +L Sbjct: 295 KQALVRGHQNDKLTAALCLDLDNFKNINDSLGHAFGDKLLRALGKRLRRELREQDTLARL 354 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +VL+G + + L +G + E + Sbjct: 355 GGDEFAVVLTGLDGREAACNTAKRLIEAICPPFQIEGHQFTVGVSIGIAIAPDDNEQAEQ 414 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LLG ++ + + + ++ L+ +RTAL G L L+ QPI + Sbjct: 415 LLGYADMALYEAKRNGRNR-YECFHVELDVAARQRRLVETDLRTALHLGQLHLHYQPIVD 473 Query: 514 KE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 ++ GY+ +L G++ P F+P+ + L + L + A+ ++ Sbjct: 474 QQTSSVTGYEALLRWEHPTRGMVMPMDFIPIAEETGLIHELGTRALNLACQEAASWDSEQ 533 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVNL P+ N+ + ++PQ + LEITE N+E ++ + L Sbjct: 534 ---TVSVNLSPVQFKNANLVHTVALALADSGLAPQRLELEITESVLLGNSEENVRTLRAL 590 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G I++DDFGTGY++ L+ D IKID FV D+ + IVR+IT+L+ + Sbjct: 591 KDLGVSISLDDFGTGYSSLGYLRSFPFDRIKIDKSFVHDMCDSREAMSIVRAITELSNSL 650 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + AE VE+++Q L G + QGYL GRP P + Sbjct: 651 MIKTTAEGVESEEQMQRLAAEGCSHFQGYLYGRPVPAGE 689 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 7/116 (6%), Positives = 21/116 (18%), Gaps = 10/116 (8%) Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG----VGKLRYPFLNLTWAVST 271 + L ++ GYL ++ Sbjct: 22 AIYLLTPDGIVA---NWNPGAQRAKGYLADEIIGKHYSLFYSEAERVAGLPEQNLAQARD 78 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHL 324 L+ + + ++ + + L+ + R Sbjct: 79 TGRFEEIGARLRKDGSTFHAHVVIEAVRDDNGHLIGFAKVTRDISERRQQELELLQ 134 >UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Q7_DECAR Length = 930 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 109/600 (18%), Positives = 201/600 (33%), Gaps = 29/600 (4%) Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 + +L VL+ ML L R I Q R E Sbjct: 314 ASLGVSAEQVEKRAWKELSISGLLVLLAFMLAGILIRQI------QRGRRVAEHQLNLAE 367 Query: 212 KRAFTLSWLAALSVL-LLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTW 267 ++ ++ I+GY F + Sbjct: 368 AVFANSVESILVTDADQRIVEVNPAFLRISGYSRSEIIGQHPRILKSGRHDAAFFARMWQ 427 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHL 324 ++ + Y +AV+ S ++ M+ + + + Sbjct: 428 ELNANDTWEGEVWNRRKNGEIYPALLSIAVVRSQDGKVVNYTGMIFDLSQQKTVEALLDQ 487 Query: 325 QALTDPLTLLPNF----RALEQAP----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 D LT LPN ALEQ + S L +D + ++ G + + Sbjct: 488 LRTFDGLTALPNRESWLSALEQQLANAKRNSSRFSILQLDLDRFKAINDSMGYSVGDQVL 547 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 + +++ + + +L G+ ++L+ + + L +R Sbjct: 548 IEAAERVKVSLRKYDIVARLGGNRFSILLNEIVDPQTIGGICEKLLTAFARPFQMGGINA 607 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + F + + L+ + A L ++ T L Sbjct: 608 HISASIGVAIFPNDGLDSKTLMMAAESALYSAKADGRNL-YKYYSHEMNEMGTHLFKLER 666 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R ALD+ + + QP N E G + +L + G ++ +F+P+ + L Sbjct: 667 MLRVALDRNEFSVVYQPQVNAKNGELVGVEALLRWHNPELGNVSAVQFIPVAEETGLIVS 726 Query: 551 FDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 V+ + T +VNL + ++ + + + + + L Sbjct: 727 IGEWVMRAACHQARTWQTELGFEIPVAVNLSARQFRRNDLLASVQTILDETGLPNRLLEL 786 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE + ++ + L+ G + A+DDFGTGY++ LK + +KID FV+D Sbjct: 787 EITEGSLIVDPIGAIDIMRGLNCLGIKTALDDFGTGYSSLAYLKAFPLNRLKIDRAFVRD 846 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + N D I +I L ++ V+AE VET+ Q+ L G Q QGYL G+P D Sbjct: 847 LPDNESDCAISNTIIALGLNLNMEVLAEGVETEAQRDFLAAAGCQVFQGYLFGKPMSGED 906 >UniRef50_A1SBS3 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1SBS3_SHEAM Length = 709 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 109/569 (19%), Positives = 194/569 (34%), Gaps = 36/569 (6%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFI 249 + E+R + A + L + G Sbjct: 122 TDISALKHAEEALKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQMIGREPDELEP 181 Query: 250 I-FTLGVGKLRYPFLNLTWAVSTL------CLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + ++ L + + + +L Sbjct: 182 TEDLWVKLLHPDDYQKVMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPVLCRGVILRGAD 241 Query: 303 V---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + R + A D LT L N L + + + Sbjct: 242 GTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCERSKQIGA 301 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +DN + ++ G + ++ + LL ++ E + +L G E ++V+ + Sbjct: 302 LLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVIVMENLGID 361 Query: 412 GR-----LQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 R + + L + L F + L+ LL Q Sbjct: 362 ERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLEELLKQADVAMY 421 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDE 521 Q+ AL + + ++V L N +R + + + L+ QP + G + Sbjct: 422 QAKEAGKN-ALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVDACGRLCGGEV 480 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNL 579 ++ G++ P++F+PL Q +L VL + L SVN+ Sbjct: 481 LIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQISLSVNV 540 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + N R++ + +P ++LE+TE N E + + L G R ++ Sbjct: 541 SVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRVRGVRFSV 600 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR +KID FV++I N DA+I I LAK L V+AE V Sbjct: 601 DDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGLGVLAEGV 660 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET+ Q L Y QGYL G+P + Sbjct: 661 ETEDQLNFLLAHDCSYFQGYLFGKPCAIE 689 >UniRef50_Q8DHT6 Tll1859 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DHT6_THEEB Length = 712 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 98/563 (17%), Positives = 189/563 (33%), Gaps = 32/563 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIF 251 + A L R L+ + L T I GY Sbjct: 139 ITDMKLTQAALLETSDRYALLTRSINDGIWDWNLTTNETFYSSRWKSILGYQDDEIGNHI 198 Query: 252 TLGVGKLRYP------FLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISFS 302 + ++ + + + +L + + Sbjct: 199 DDWLKRIHPQDGDRVKLNLMLHIRGQTPHFHQEFRIQHRNGAYRWVLARGLVLRDVHGNA 258 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFC 353 + + + L D LT L N L EQ A + Sbjct: 259 TRVAGSLTDLTEHRLGEAQLLHDGLHDWLTGLANRTLLFDRIEQAARHGRRRPDYKLAIL 318 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + ID + ++ G + + L +++ ++ + ++ G E +++L Sbjct: 319 FIDIDRFKVINDSLGHSSGDLILIELANRLTRIVRADDTVARIGGDEFVILLDDISDNND 378 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + N+ + + + E + L ++ Sbjct: 379 ALAVCDRIHSELDKPFVVNDQPIALRVSIGVALRSAHIEKAENYLRNADIAMYRAKLAGG 438 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 E + ++ L +R A+++ + L QPI + G++ ++ Sbjct: 439 NR-YQVFSEDMHLMARDRLSLEIGLRQAIERDEFTLLYQPIYRLRDNALYGFEALIRWQH 497 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLL 585 G + PD+F+PL + L V+ + L +VNL L+ Sbjct: 498 PTQGFLLPDRFIPLAEETGLILPIGDWVIWRACRDLQYWHEQFPQCQLSVNVNLSNRQLM 557 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + +++ ++ I P + LE+TE + + +L G ++++DDFGTG Sbjct: 558 HPALPEQVLAALEQTQIPPHCLHLEMTESVGIDQPDQVRETLCKLKAQGIKLSLDDFGTG 617 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L L DI+K+D FVK I +++ +I LAK +L VVAE VE Q Sbjct: 618 YSSLRYLTHLPIDILKVDRSFVKLITETEQRPLVIDAIVSLAKGLALEVVAEGVEHPYQV 677 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L +LG Y+QGY RP Sbjct: 678 TRLRELGCDYVQGYYFSRPLTTE 700 >UniRef50_A0YWR3 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YWR3_9CYAN Length = 624 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 102/520 (19%), Positives = 198/520 (38%), Gaps = 25/520 (4%) Query: 229 LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 ++ + GY P G + L A++ + + Sbjct: 89 IVYINAAFTKLTGYSSPEIMGQTPQILQGPRTDYHVLKRLKQALTRGQVFEGEAINYRQD 148 Query: 286 ETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 +E+ + + + L + R + ++ + DPLT L N L Q Sbjct: 149 GSEFQNHCYIEPIFNNQGQIIYYLSIHREIIPQNPVQTQFSTRNNLDPLTGLANRSLLLQ 208 Query: 343 APEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 +Q + + L +D + ++ G H + +I + L ++ + + Sbjct: 209 RLQQSIDQAQQHPDYLFAVLLLDLDRFKLINDSLGHQAGDHLLTTIGQRLESCIRPTDMV 268 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G + +++L ++ + + ++ + N + + + + Sbjct: 269 ARLGGDQFVILLDQVRDLLKVSQVAERIQQYLNKPLTLKNQEVFISASLGIVLSSPSYDH 328 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + ++ +Q+ A ++ + +++ L N +R A+D L ++ QP Sbjct: 329 PEDIIRDADTALQQAKAGGKA-CYTVFDQTMHRHALERLQLENDLRRAIDHHQLQVHYQP 387 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 I G++ +L + G++ P+ F+P+ + L VL + Sbjct: 388 IIAMDTGRITGFEALLRWYHPERGMIPPNYFIPIAEETGLIQVIGQWVLREACQRAKLWQ 447 Query: 568 ---CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 SVNL L N+ + + P+ + LEITE AE+ + Sbjct: 448 LTFPQSPSLFMSVNLSIHQLTYPNLVEIVSDILTETGCDPRYLKLEITESAIAQKAETVI 507 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +EQL G ++ IDDFGTGY++ RL +K+D FV I + A I +I Sbjct: 508 PILEQLTALGIQLCIDDFGTGYSSLSRLYYFPITTLKVDRSFVAAISQSNGTAKIASAII 567 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +LA + L V+AE VET+QQ +L G Q QGY +P Sbjct: 568 NLAHSLGLEVIAEGVETEQQLTILRSWGCQLAQGYHWAKP 607 >UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YPN8_9CYAN Length = 1177 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 101/589 (17%), Positives = 204/589 (34%), Gaps = 34/589 (5%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + ++ + R +V + + E + + A + + L Sbjct: 580 VLAILVFLMSIPKAEDRRLVEFISSVATQLGTVFERKQAEAKYRNIFKNAVEGIFQMNLE 639 Query: 232 T-----PYENDFIAGYLVPVFFIIFTLGVGKLR---YPFLNLTWAVSTLC-LLNYNQNFL 282 I GY P + V L + ++ + N+ Sbjct: 640 GLYTSANPALANILGYSSPQVLLNKKTKVKNLYFRSEQYSKFIQTLNKQGKVSNFESQVY 699 Query: 283 QGVETEYSLAFILAVLIS----FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + + S + + + + A D LT L N Sbjct: 700 RQDGRLIWILQNARAIRSSKGKQVIYYEGSIIDITNLKKTEEKLRYSASHDALTNLWNRS 759 Query: 339 ALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 + + + L +D + ++ G M + I + L + Sbjct: 760 FFIERLKKSITRLHKQSNYLFAVLFLDLDGFKIINDCLGHGMGDLLLIEISKRLKISLHS 819 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDG 446 L +L G E ++L Q + + + ++ + +G + Sbjct: 820 GNILCRLGGDEFTILLENISDINEAQEIASRVLKILNKPFTLKGHQVFIGTSIGIVKGTR 879 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 +L ++ A+ + + +++ + +R AL+Q + L Sbjct: 880 EYHLPPEILRDADTAMYRAKKKGKGCAV-LFDAGMRTDALRRLQIQTDLRFALEQEEFQL 938 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QPI + G++ +L G ++P +F+P+ + + VL + L Sbjct: 939 YYQPIIELSTGKIAGFEALLRWEHPQQGFISPGEFIPVAEETGIIVPLGEWVLREACRQL 998 Query: 564 ATHPCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 T K SVNL +++ R+ ++ + H+ + + LEITE ++ Sbjct: 999 HTWKEKFSLSKLLMMSVNLSSQQFT-VDLSQRVDQILQETHVLGRELKLEITETAIMADP 1057 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + ++ + +L + I IDDFGTGY + L + DI+KID FV + IV Sbjct: 1058 QLAIATLNELKQREIMICIDDFGTGYCSLGYLHQFPVDILKIDRSFVNKMQVG-DKREIV 1116 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 R I +LA++ + +AE +ET++Q L L +Y QGY +P + Sbjct: 1117 RVIVELAESLRMDAIAEGIETEEQYIQLQNLHCKYGQGYYFAKPLHPNE 1165 Score = 55.7 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 16/172 (9%), Positives = 36/172 (20%), Gaps = 13/172 (7%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 V + L + L + I ++ ++ TL ++ Sbjct: 284 VSGAIVILIGLGTTGIVLILRPLTDQMQTEIIERQKAEIALRHEKDFNQTLFHANPAFLI 343 Query: 227 LLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW----AVSTLCLLNY 277 +L GY + L R+ L W + + Sbjct: 344 VLDPEGKVKLMNDTMLNALGYTLEEVVGTDYLATFVPRHNKDALPWVFELMIHRQLPIRT 403 Query: 278 NQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + L + + + + L + L Sbjct: 404 EEKVLMKNGKKIIVEWYGRAVFNPETDEYEYFLGAGLDITERKRTEEELQLL 455 >UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y7_9GAMM Length = 1123 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 100/661 (15%), Positives = 213/661 (32%), Gaps = 54/661 (8%) Query: 103 ILRWQLGTRWRYGLTSRYVWQR-----LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF 157 + G R + R L L+ + + + Sbjct: 461 VTFMLAGRPMRLIFNPTNSFIRSASTNLTQFALIGGFLLTGLFAFLFLSITGRTHRISTE 520 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 + + + L Sbjct: 521 VTLRTEELSEATKRAQDSEM--------------RIRDVLKEMQLTEQKLLLS----DVA 562 Query: 218 SWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFT------LGVGKLRYPFLNLT 266 + ++++ ++ I GY + L + + Sbjct: 563 FNSTSEAMMITDKSKKIIVVNSAFSDITGYDGTEVIGRYPSFLVSGLTKSDFQQLSESFA 622 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWH 323 A+ + +T + ++ + + + + + + Sbjct: 623 AAMKAYGIWRGEIQCRHKDKTMFPAYVSMSAVYDTDGNICNMVGVFSDISEVKEAQAKIE 682 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT LPN R L +D + ++ G Sbjct: 683 RHANYDILTDLPNRRLFTDRLQQAILRCGRHNEKLCLMFLDLDRFKDVNDTLGHEFGDQL 742 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTG 432 ++ + + ++E + + +L G E ++LS + + ++ L S I Sbjct: 743 LKQMAVRIQACVREVDTVARLGGDEFTIILSEFDGKSHAVNIAQKLISEIEKPITVQEQT 802 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L + + + L+ + A + + +L Sbjct: 803 LRVTTSVGITFYPDDAIDSGMLIQNADRAMYAAKDMG-GSAFKFYTTELELSWLSRTFIL 861 Query: 493 NTIRTALDQGDLLLYAQPIRNK----EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 N + A+++G++ +Y QP+ + + ++ + G+++P FLP + + Sbjct: 862 NELEAAIEKGEIEVYYQPLIPANTETACQSAEALVRWQHPERGLISPADFLPQAERMGMI 921 Query: 549 ARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 + D V + + + T + SVN + + + I+ + Sbjct: 922 EKIDDFVFSQVCQQIKTWQANGIGDVHVSVNRSAHNFGNQRGRLDWLAYIREQGINAGLI 981 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE S + +++L + G +IA+DDFGTGY++ LK + D +KID F+ Sbjct: 982 TLEITESVLMRRHAESGHLLKKLRQAGVQIAVDDFGTGYSSLSYLKEMDIDYLKIDRSFI 1041 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +D+ + D I+ +IT +A+ + V+AE VET Q+ +L K+G +LQGY +P P+ Sbjct: 1042 RDLEADDNDRAIIEAITGMARHLGIEVIAEGVETLSQKEILEKIGCHWLQGYFFAKPMPV 1101 Query: 728 A 728 Sbjct: 1102 D 1102 >UniRef50_Q1QZB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZB7_CHRSD Length = 831 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 128/761 (16%), Positives = 258/761 (33%), Gaps = 37/761 (4%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSI--LFI 58 + + + ++++ FT + L + L + S + + + Sbjct: 57 LLAGAAMMGLGVWSMHFTGMLALRLPLPMHYDAGLTLLSLVPAMLGSGYALRIMAMPRPR 116 Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 + V V+ GM + + ++ V + + + + + Sbjct: 117 LSYSLVGGVVLGMGIGIMHYLGMEAIRMPVEVRYDIGLFVMSLVVAIGLGAAAMLIHRRY 176 Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 + + I S+ + G + A V S + Sbjct: 177 ARQRRLNRLDHRLVSIAACISLAISGMHYTAMSATYYLPTPTPAPQHAVTPASWLGVSVS 236 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----P 233 ++ L + F +R S+ ++ + + LL Sbjct: 237 GIVIL--LLMVAGLWVFIDRRLQRHQRQSVMSREQLMEVIAAINDAFLLFDHRGRIVLSN 294 Query: 234 YENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + GY + + + ++ V + + Sbjct: 295 RTFSTLTGYTPDEIRNQPLSILEHSHESARTYRDIQRCVVEHGHWQGEIEARRKNGEAFP 354 Query: 291 LAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-- 345 + + + + + + H A D LT LPN + L + Sbjct: 355 VRVSVNRVDYSQGNVHHFVATLHDLSAHREAQAKIHRLAHHDTLTGLPNRQTLYARLDAL 414 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 Q G + L IDN + ++ G + + + R L + L +L G+ Sbjct: 415 QAACRAQGPGGALIMLDIDNFKALNDSRGNAVGDTLLLHVARRLKRFARHEHDLARLGGN 474 Query: 400 ELLLVLSGPETE-GRLQHMVNILNSRQ-------IHWNNTGLDMGYGAAWGRFDGNQETL 451 E L+++ + ++ ++ + RF + Sbjct: 475 EFALIVTDLPSAHDDADEALSRHLDTVRQAIGGVYDLDDFTHTTTHSLGGVRFGDGDVSA 534 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ + S + + + + +V + +R AL L L+ QP Sbjct: 535 DELVKRASLAMSHAKQEGGNAS-RAFRPEMEQALQVRVCMEAELRQALATDQLQLFYQPQ 593 Query: 512 RN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--P 567 + G + ++ + G+++P F+PL + L + VL++ + LAT Sbjct: 594 VDTRGTIIGAEALIRWQHPERGMISPGDFIPLAEETGLIEQIGGWVLDTACQQLATWSRH 653 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + S+N+ Q + R++ R+ + + LE+TE +N E + + Sbjct: 654 DATSHLQLSINVSVRQFQQADFVSRVLDTIARHRAPAERLTLELTESLLLANVEGVIDKM 713 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L + G ++DDFGTGY++ LKRL + +KID FV+D++ + DA IV++I LA Sbjct: 714 TRLKQHGLNFSLDDFGTGYSSLAYLKRLPFNTLKIDVSFVRDVLVDANDAAIVKTIVALA 773 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L VAE VE Q Q+ L +LG Y QGY GRP P+ Sbjct: 774 DSLQLKSVAEGVEMQAQREFLERLGCHYHQGYYFGRPSPID 814 >UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEH3_9GAMM Length = 700 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 116/619 (18%), Positives = 229/619 (36%), Gaps = 29/619 (4%) Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT----AVLIYNMLFYYLTRM 189 L S D P I++ A+ +++ + A+ R Sbjct: 64 SAAAALSTLKASGIDLPFIIASGAVTAEDAVSLLKEGAHDFMDKGALARLVPAIERELRE 123 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + + S E+ ++ + + + +GY Sbjct: 124 ADVREQRRQAEAQVEVLSQALEQCPASVVITSPDGN---IEYVNSYFEKASGYSASDAKG 180 Query: 250 IFT---LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SV 303 L + + L+ V+ + ++ + + L++ Sbjct: 181 RSLGFTLQKEEHEHLMSELSQLVTEGQRWSGEMRSIRADGEMFWEYVKASPLMNEDKSVS 240 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + ++ QA D LT L N L + + + + + Sbjct: 241 HYIVVKEDITVQRDYEQQLLRQAHYDDLTGLANRVLLVEKLTQALQNAQQNNSQLAVLGI 300 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ G + ++ + L ++ + + ++ G E +LVL + Sbjct: 301 DLDDFKNVNDSVGHSIGDTLLKQAAQRLSSCIRSGDIVARMGGDEFVLVLPLLSDAKNAE 360 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 M + S+ + + + + +L QS Sbjct: 361 LMAQRIVQKFSKPFNIAGRQYSVTCSIGISVYPDDTSDAHMMLRNADLAMYQSKDQGRDQ 420 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 E ++ + +++ L +R +D G+L L QPI N + G++ ++ + D Sbjct: 421 -YQFFTEDINRRLVERLDLEEKLRNVVDNGELALQYQPIFNLETQKIAGFEALVRWPQAD 479 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN 588 G ++ PD F+P + + D VL S + A ++N+ PL L Sbjct: 480 GSVIMPDSFIPAAENIGVIQKIDEWVLASACRETAPFLLSGDDNLCLAINISPLQLEDPG 539 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++ + + P+ + LEITE S+AE++ NI+ L + G R+++DDFGTGY++ Sbjct: 540 YVAFVMAQLEANQLEPRHLELEITERVLVSDAETTDRNIKALTELGIRMSVDDFGTGYSS 599 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR +KID FV D+ + +V +I +AK + V+AE +ET+ QQ LL Sbjct: 600 LGYLKRYPLHTLKIDRSFVADMDVDDSARRLVETIILMAKGLQMDVIAEGIETESQQVLL 659 Query: 709 HKLGVQYLQGYLIGRPQPL 727 H+LG QGY + RP L Sbjct: 660 HELGCSQAQGYFLSRPVSL 678 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 96/424 (22%), Positives = 177/424 (41%), Gaps = 17/424 (4%) Query: 320 RRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMM 371 +A D LT LPN + + +A + + +D+ + ++ G Sbjct: 433 EELRHRAFHDHLTSLPNRMHSSTQLDLMISHTIKHQATAALLFIDLDHFKEINDTLGHST 492 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 +R + + L ++E + + +L G E ++ ET + + L + Sbjct: 493 GDELLRKVSQRLRRSVREEDIVARLGGDEFTVITGVLETRSDAESIAQKLLNELIRPYLI 552 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + L + F + + + LL ++ + ++ + +++ Sbjct: 553 DGNELSVTASIGVSFFPEDGDNSEILLRNADSAMYEAKRNGRN-GYRLYTSAMTEEISER 611 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 L +R A+ + +L LY QP + G + +L G++ PD+F+P+ Sbjct: 612 FALTEELREAISREELELYFQPQVDIRTGSILGAEALLRWNHPQRGMIPPDRFIPIAESS 671 Query: 546 NLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 + VLE + +A P+ +VN+ + + + +I L P Sbjct: 672 GQMIKIGAWVLEQVCAKVAGWKERGIVAPKIAVNISNQQ-MNRELVEQITELLASSKCDP 730 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE N E + + L G IAIDDFGTGY++ LK+L + +K+D Sbjct: 731 ACLELEITESCLMENPEQMAHELSSLKALGVGIAIDDFGTGYSSLSYLKQLPINKLKVDR 790 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV D+ + D I R+I + ++ +L+V+AE +ETQ+Q LL KL QGY +P Sbjct: 791 SFVSDLQDDENDLAITRAIVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSKP 850 Query: 725 QPLA 728 P Sbjct: 851 LPEE 854 >UniRef50_A6Q9W1 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9W1_SULNB Length = 866 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 111/555 (20%), Positives = 205/555 (36%), Gaps = 28/555 (5%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTL 253 + K K A ++ A +++ ++ + GY Sbjct: 183 KSRQDKEEKLKLAASVFSHAREGIIITDAENKIIEVNDTFISMTGYKREEVLGKNPKLLK 242 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVR 310 + + ++S + + EY ++ ++ + + Sbjct: 243 SGKHDSGFYAEIWRSISEKDYWSGEIINRRKNGEEYMEMLTISAILDDQGKPKNYVALFT 302 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEF 362 + ++ A D LT LPN L Q + ID + Sbjct: 303 DITTKKEHQKQLEHIAHYDVLTSLPNRVLLADRLSQALHSSRRNNLVLGVAFIDIDGFKE 362 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ YG + ++ + ++ N+ L ++ G E ++V + + M+ L Sbjct: 363 INDTYGHNTGDDLLITLSSRMKGALRNNDTLARIGGDEFIVVFTDLKKPEDCHPMLERLL 422 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRF-DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 S I NN + + + L+ Q Q+ + Sbjct: 423 QVTSAPIILNNKSMSVSASIGLSIAAPDKEIDADQLIRQADQAMYQAKQSGKNR-YSVFD 481 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 + LN I A+D + +LY QP N E G + ++ D G++ P Sbjct: 482 IEKDSAVNIKRERLNQISKAMDNREFVLYYQPKVNMTTGEVIGVEALIRWEHPDHGLLLP 541 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 +FLP+I +S + V+E+ L + T SVN+ L L Q + R+ Sbjct: 542 GEFLPIIENNMISIKLGDWVIETALSQIETWQRQGLDISISVNINALQLQQIDFVSRLEE 601 Query: 596 LFKRYH-ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 L + + P + LE+ E + + + G R A+DDFGTGY++ L+R Sbjct: 602 LLSMHATVDPSLLELEVLETSVIDDITQVSNVMHRCIDLGVRFALDDFGTGYSSLTYLRR 661 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L A +IKID +FV+D++ + D I+ + L+KA V+AE VET + L ++G + Sbjct: 662 LPAHLIKIDQIFVRDMLIDPDDQAIIEGVIGLSKAFGRKVIAEGVETIEHAKALLQIGCE 721 Query: 715 YLQGYLIGRPQPLAD 729 QGY I + +D Sbjct: 722 LGQGYGIAKAMKASD 736 >UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YLW9_MOBAS Length = 792 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 113/705 (16%), Positives = 212/705 (30%), Gaps = 30/705 (4%) Query: 48 PLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQ 107 I + V+ + +S A ++ +L A L Sbjct: 69 AFSPWALIWLLGLSYIVLVSIRAWSRFQRRAPLVSASSRATAHAVRSAFILGAWWGLAIL 128 Query: 108 LGTRWRYG----LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 G + + + G + + F + + Sbjct: 129 TFYPSSDGDAKSVIAVIAMGMICGGGFALSALKRALQAFIIPLFVGSVVALGISQGTNDY 188 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR-RDIAPSLGKEKRA-FTLSWLA 221 F + LL V + L + + H E+ + Sbjct: 189 FLLALLLGFTFIVYRASCARGELLQENLEGHQKLAEQSSIIELLLREFEEGTSDWIWQTG 248 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 L+ I G + + Sbjct: 249 HDGQLV---RGGDRFSQIFGRGTDRLIPNGDQTFAGQGLDLSPIAQPMLERTPFRETIIE 305 Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + +A + + + RR A D LT L N Sbjct: 306 IPSPQGAAWIAMTGKPIFGHDGAFTGYRGVASDITATTHAERRIAYLAHHDSLTGLANRS 365 Query: 339 ALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 + + Q S L +DN + ++ G + +R + LL +++ Sbjct: 366 WFAEEIDRICASPPPQGPTSSLLYLDLDNFKLINDRNGHLTGDQLLRQVAARLLRIVEPG 425 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 + + ++ G E +V + + + ++G + Sbjct: 426 DMVARIGGDEFAIVAHSAPDTASADSLATAILACFATPFSLGAELANVGCSVGIAFPGLD 485 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 LL ++ A E ++ + + L +R A+++ +L+L Sbjct: 486 GANPDDLLRNADLALYEAKAAGKN-TFCFFESEMAQRLRDRHRLEYDLRCAVERNELVLN 544 Query: 508 AQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + G++ ++ G + PD F+PL Q VL + A Sbjct: 545 YQPIVDSRTRQTLGFEALVRWEHPLHGRVQPDHFIPLAEQTGAICGIGAWVLREACRNAA 604 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VN+ I + ++ + LEITE + E+ + Sbjct: 605 SW---GDHLTVAVNVSVDQFRHGTIMTDVEDALASSGLAADRLELEITESLFIDDPEAVV 661 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G RIA+DDFGTGY++ L++ D +KID FV I + + I+ +I Sbjct: 662 TVLHRLRSLGVRIALDDFGTGYSSLSYLRKFPFDKLKIDRSFVNAIKDDRIAHGILETIL 721 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L + LSV AE VE +Q +L ++ QGY RP AD Sbjct: 722 ALGRVLDLSVTAEGVEDAEQIDILTRMTCNQFQGYYFSRPMEAAD 766 >UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with response regulator, putative n=6 Tax=Cyanobacteria RepID=B0C9M5_ACAM1 Length = 636 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 102/553 (18%), Positives = 196/553 (35%), Gaps = 37/553 (6%) Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 + A + + A V + + + L +G+L Sbjct: 84 ERLKSEALTQDIPVIFISALDDALDKVKAFTVGGVDYITKPFQLAEILARVENQLTIGRL 143 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY-----MVRIYH 313 + L + + L + + + + Sbjct: 144 QK------EQRKQNERLQAEVRDR------IAAEAQIQALNADLEQRVVQRTERLNQEIA 191 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMS 364 E + ++ A+ DPLT LPN E+ + + L D + ++ Sbjct: 192 EREKVQQQLKHMAMHDPLTDLPNRTLFLTCLEETIQDTQKQTDQSFALLFLDCDRFKSIN 251 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS- 423 G ++ + +I + + + L +L G E ++L E + ++ + + Sbjct: 252 DSLGHLVGDQFLVAIAKRFQRCVGDQ-LLARLGGDEFTILLKNVSNEQQAINIADAIQRS 310 Query: 424 --RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 H + + + + +L ++ A + + Sbjct: 311 LLEPFHIGDNEFFVSASIGIVMSSPDYQQPTEMLRDADTAMYRAKAMGKARHI-VFNASM 369 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 + L +R A+++ + +L QPI G++ ++ + + G ++P KF Sbjct: 370 HEDVQSSLQLETDLRRAIERQEFILNYQPIVALDTGMITGFEALVRWISPELGFVSPGKF 429 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQKNIAGRIIR 595 +PL L VL + L + SVNL Q N+ I + Sbjct: 430 IPLAEDTGLIIPLGEWVLREACRQLNEWQSNNVTDIPLTMSVNLSVKQFSQPNLIETIDQ 489 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + Q + LEITE N++S+ ++QL ++IDDFGTGY++ L R Sbjct: 490 ILAETQLPTQCLKLEITESAIMENSDSAAKILDQLRDRQIHLSIDDFGTGYSSLSYLHRF 549 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + +K+D FV + + IV++I LA+ + VVAE +ET +QQ L LG +Y Sbjct: 550 PVNTLKVDRSFVCRLDAADDNVAIVQAIVTLAQTMGMDVVAEGIETTEQQHQLENLGCEY 609 Query: 716 LQGYLIGRPQPLA 728 QGYL +P Sbjct: 610 GQGYLFCKPVNAE 622 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 114/684 (16%), Positives = 234/684 (34%), Gaps = 46/684 (6%) Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL 125 + +F + +Q ++ + + + L + + + + + Sbjct: 30 LLAASIFFLTRDAKGVYRVQREDLVSLAEIIGANSASALVFDDPESAQRTIAPLASKRSI 89 Query: 126 FWLGLVTPIGIKCSMYLV--GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 + ++T G + ++ + PL+ A+ V+ + F Sbjct: 90 LAVYVLTSEGQIMARHVAPEAGNAELPLERLGASPSPAAVLAAVETIRKTAEKKSAVPGF 149 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 L + P + + E L W A +++L +L+ F A Sbjct: 150 DCLVQ----PVYFDYERVGTVVIHADTELFRKNLRWTATVTLLFMLVTVIAAYFFSAKLQ 205 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + L+ NY + + E L + Sbjct: 206 QMISRPL-----------LDLLSSMKDVSASKNYAIRVAKPSDDEIGLLY---------D 245 Query: 304 CLLYMVRIYHRS----EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 M+ A DPLT LPN S Sbjct: 246 GFNEMLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERNRQALS 305 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D+ + ++ G + + L +++ + + +L G E + Sbjct: 306 VIFIDLDHFKDINDTLGHRTGDLLLIDVANRLSTVVRSCDTVARLGGDEFTVFTQNVMNA 365 Query: 412 GRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + L ++ + + + F + +T+ LL + A Sbjct: 366 DNAAIVAAKLNALFAKPFQLGESEIYVTASIGVTLFPNDGKTVDELLMNADIAMYHAKAC 425 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + ++ ++V LL+ +R AL++ + +L+ QP + + ++ Sbjct: 426 GKN-VYKMFDRKMNEHANERVTLLSDLRLALEREEFVLHYQPKVDLLTGNVTSVEALVRW 484 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTL 584 + G++ PDKF+ L + VL + G R +VNL P Sbjct: 485 MHPRLGMLAPDKFIRLSEESGFIVELTDWVLRTACTQAKKWQEQNLGSVRVAVNLSPYHF 544 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++++ I + + P + +EITE N E + +L + G I++DDFGT Sbjct: 545 QRQDVKEAIFSVLDATGLEPALLEIEITESALMQNDEYTCALFRELRELGMTISVDDFGT 604 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L R + +KID F+ +++ ++ D IV +I +AK+ ++ +VAE VET Q Sbjct: 605 GYSSLSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTAIIAMAKSLNMQIVAEGVETVDQ 664 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L G +QG+L+ RP Sbjct: 665 LEKLKDQGCHEIQGFLVSRPVAAE 688 >UniRef50_C3KCF3 Putative signalling-related protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KCF3_PSEFS Length = 857 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 115/696 (16%), Positives = 229/696 (32%), Gaps = 49/696 (7%) Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 + + + + +V A R S ++ + + Sbjct: 156 ARAGADSETPVTAFINVHGSPALVAAAAITPGTDPTVRADGRPASVLIFIDILNSAKLAV 215 Query: 134 IGIKCSM-------------YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA----- 175 IG + + L+ D S + A ++ + Sbjct: 216 IGDEFGVNKLHIASPDEIGKMLLFPLGDNGTAGSLHWEPARPGLRLMGVGLPLLGLAALL 275 Query: 176 -VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 L+ + T ++ + + E R + ++ V + + Sbjct: 276 VCLMTWAISRRTTAAALALDASHSSLQNSQNALATSEARFRDVVEASSDWVW--EIDAGW 333 Query: 235 ENDFIAGYLV--------PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 +++ + A ++ ++ Sbjct: 334 RFTYLSERFEGVTGLTRYAWIGATMNDLLETESGLLSQWLSAPGRRPDISVQCRYVDAAG 393 Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE- 345 E + + RR + D LT LPN L+ + Sbjct: 394 QERTTRLSAREMP--CGGFRGTATDVTEEVEARRRIEFLSQHDALTGLPNRTRLQAFLDG 451 Query: 346 -------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 E L +D + ++ G + + L ++ + + ++ G Sbjct: 452 KLKALPSTEQPLVMLSLDLDRFKPVNDLLGHAAGDRVLNEVSARLADCVRHGDLVARVGG 511 Query: 399 SELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +L+L+ T+ ++ + L R I + + + + LL Sbjct: 512 DEFVLILTDAGTQDEVETLCKRLIESIERTIRIDEQEVFISASIGIAIAPNDAREAAELL 571 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IR 512 ++ A ++ + ++ L + +R A+ +L L+ QP I Sbjct: 572 RYADIALYEAKAAGRN-TWRFYSGDMNARIIERRRLESDLRYAIKHAELRLHFQPRYRIA 630 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + + G + ++ G++ PD F+P+ + L VLE+ A P Sbjct: 631 DGQMVGAEALVRWQHPVRGLIAPDTFIPIAEESGLILALSDWVLETACVCAAQWPE---P 687 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 SVNL P + N+ R + K I P V LEITE +A ++ + L + Sbjct: 688 LFVSVNLSPTEFKRGNLVERTQQALKSSGIDPARVELEITESVMLEDATGALEVMRTLKQ 747 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G RIA+DDFGTGY++ L+ D +KID F+ + + D I+++I L + +L Sbjct: 748 LGVRIAMDDFGTGYSSLSYLRDFPFDGLKIDRSFLTRLEESDDDKAIIQAIVGLGRTLAL 807 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +V AE +ET + ALL + + QGY + RP + Sbjct: 808 TVTAEGIETAEHLALLKAVACEEGQGYFLSRPLDIE 843 >UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=Q21UE9_RHOFD Length = 1114 Score = 643 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 110/568 (19%), Positives = 215/568 (37%), Gaps = 33/568 (5%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVPVFFI 249 ++ E R L+ L++ + +P Sbjct: 540 LITDITARKQSEERLRESEARFRALTELSSDWYWEQDAQFRFVRLDGSSQTSMRLPEDNY 599 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCL------LNYNQNFLQGVETEYSLAFILAVLISFSV 303 + WA L ++ V +A + Sbjct: 600 LGVTRWETDAQGVSQAQWAAHRAVLQAHETFHDFEMLCTDAVGCLTWVAISGTPIFDVQG 659 Query: 304 ---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSF 352 + R + + A D LT LPN R L +Q + Sbjct: 660 QFKGYRGIGRDISERKRAEEKIERLAFYDVLTDLPNRRLLMDRLQQALVSSAREHGAGAL 719 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---- 408 + +DN + ++ G + ++ + + LL ++E + + +L G E +++L G Sbjct: 720 LFIDLDNFKDLNDTQGHDVGDALLQQVAKRLLASVRETDTVARLGGDEFVVMLQGLERTQ 779 Query: 409 -ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + +++ + + ++ + FD Q+TL LL Q + Sbjct: 780 ADAITQVEQVGRKIMAQLNQPYRLGSAEHHSTPSIGVTLFDNQQQTLDDLLKQADLAMYE 839 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEI 522 + + L + + T++ L +R L + +L+L+ QP+ + G + + Sbjct: 840 AKSAGRN-TLRFFDPTMQALVTQRTALELELRHGLARDELVLFYQPVVDQDARVVGVEAL 898 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLM 580 + G++ P F+P+ Q L VL L + + +VN+ Sbjct: 899 VRWQHPQRGLVAPLAFIPMAEQTGLILPLGQWVLRVACLQLVSWSAQAATERLTMAVNVS 958 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 Q +++ + ++ +P+ + +E+TE ++ + ++ + +L G R ++D Sbjct: 959 ARQFRQPEFVQQVLTMLRQTGANPKRLKMELTESLLLTDTQDAIAKMSELRDVGVRFSLD 1018 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK L +KID FV+D++T+ DA I R++ L ++ L VVAE VE Sbjct: 1019 DFGTGYSSLSYLKLLPLQQLKIDQSFVRDVLTDPNDAAIARTVLALGQSLGLGVVAEGVE 1078 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T Q+ L + G QGYL G+P P+A Sbjct: 1079 TVGQRDFLLQHGCTRFQGYLFGKPVPIA 1106 Score = 58.8 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 18/266 (6%), Positives = 49/266 (18%), Gaps = 15/266 (5%) Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM--- 140 Q + + + RW G+ + + Sbjct: 302 QQIHLFESMENLAAVGYWTSGADPATLRWSKGMYRLAGLAPGSVMHRSVGRSRIRAEDQE 361 Query: 141 -YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + + + D + + + + + + A + Sbjct: 362 KFAQARRAVDGAIVEYQWEHPDGRMHWHRSRMQHGSGEGGEAIVFGVVQDVTHERAAALA 421 Query: 200 WRRDIAPSLGKEKR---AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF-----IIF 251 + + R L + + G I+ Sbjct: 422 LQDRLGFIQNITSRVPGMVFQLRLKTDGRFQFGYVSDLVREIFRGVSPEQIMQDAAGILK 481 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL--YMV 309 + ++ + L + L +L ++ Sbjct: 482 LHHPDDVSEFIASIKASARELKPWRHEYRLRFEDGEVRWLLGQATPEREADGTVLWNGLI 541 Query: 310 RIYHRSEWLNRRWHL-QALTDPLTLL 334 + R +A LT L Sbjct: 542 TDITARKQSEERLRESEARFRALTEL 567 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 89/449 (19%), Positives = 182/449 (40%), Gaps = 14/449 (3%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQE 347 ++ ++ F +L+ + A D LT LPN A + + Sbjct: 215 VVIHIIFWFVGMILFRFVYNKERK-ARYELEYFANHDSLTGLPNRHAYIDKITSMVNKNK 273 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +DN + ++ G + ++ + + L ++E + L + G E + + S Sbjct: 274 NNFALIFMDLDNFKTINDSLGHTLGDMLLQKVAKRLKNEIKEYDMLSRFGGDEFVFLFSN 333 Query: 408 PETEGRLQHM---VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ++E ++ ++ + + N + + + + + LL Sbjct: 334 VQSELTIEKTMIKIHEVLKKPFILNTYEVYTTASIGIAIYPDDAQDAELLLRNADVAMYD 393 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDE 521 + + ++ +++L + + AL+ +L L QP + + G + Sbjct: 394 AKQSGR-SKYSFFNADMLNLSSNRLMLESELHKALENNELFLLFQPQVSLWNEKIVGVEA 452 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLM 580 ++ G+++P F+P+ L +++ LA S+N+ Sbjct: 453 LIRWQHPTKGLISPLDFIPIAENSGLIMPIGEWIIDQACDQLALWKDTHMSEATLSINVS 512 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 +L +++ I +R I + + LEITE N ++ + +L K G IAID Sbjct: 513 AKQVLHQDLYSYIEAAIERTKIDGRFLELEITESVIMENINETVRILSRLKKLGVSIAID 572 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK+L D +KID F+KDI + D I +I ++K+ SL +VAE E Sbjct: 573 DFGTGYSSLSYLKKLPIDKLKIDREFIKDIPNDKDDIAITNAIISMSKSLSLKIVAEGPE 632 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T++ L QG+ +P + + Sbjct: 633 TKEHIEFLQNSKCDIAQGFYYSKPITIVE 661 >UniRef50_C6WYQ8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYQ8_METML Length = 739 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 108/585 (18%), Positives = 210/585 (35%), Gaps = 48/585 (8%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGK-EKRAFTLSWLAALSVLLLLLCTPYENDF 238 F+ L I + A+ + R+ + + +S L A L + Sbjct: 148 VQGFFVLVTDISAIKEAEKVLRQSEERFRSVVQDQTEVISRLRADGTYLFVNDVYCRFFG 207 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + L+ L S+ ++ L G + + F + Sbjct: 208 KTEQEMIGSTWKPVVYAEDLQRVVDELAMLSSSNPVVMIENRVLSGTGDVHWMQFSNRGI 267 Query: 299 ISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + + R + A DPLT L N R + Sbjct: 268 FDEYGQLTEIQSVGRDISDRKRAEEEVQKLAYKDPLTGLSNRRLMLDRLRIALATSARSM 327 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + + + + ++E + + + G E ++++ Sbjct: 328 QYGALLFLDLDKFKVINDTQGHADGDLLLVEVAKRITACVREIDTVSRQGGDEFVVLVER 387 Query: 408 P-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWG-----------RFDGNQ 448 E + + + + NN F G+ Sbjct: 388 LGEGLEEASRTVAKIAETIRLTLAEPYQINN-----------AHIHSSSSIGISLFCGHD 436 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + + L+ + Q+ + + + L + + AL L+ Sbjct: 437 QDVDELIKRADMAMYQAKDGGRNRT-RFFDPQMQELVEVRATLESDLHNALATDQFELHY 495 Query: 509 QPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 Q N + G + ++ + G+++P F+P+ + L VL+ + +A Sbjct: 496 QLQVNHENKPIGAEALIRWVHPQRGMISPAHFIPVAEESALILNIGDWVLDEACRQIAVW 555 Query: 567 --PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VN+ Q + ++I ++ I P + LE+TE A + + Sbjct: 556 STNAKMCDLVLAVNISAQQFKQAHFVDQVIAAIHKHGIDPSRLKLELTESVALDDITDVI 615 Query: 625 YNIEQLHKF-GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 L + G +++DDFGTG+++ LKRL D IKID FV+DI T+ DA++V++I Sbjct: 616 AKKNLLRQKVGVTLSLDDFGTGFSSLSYLKRLPLDQIKIDQSFVRDITTDKSDAVMVKTI 675 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D+A+ SL+V+AE VET+ Q A L + QGYL +P P+ Sbjct: 676 IDMAQNFSLNVIAEGVETEAQLAFLKHHECKAYQGYLFSKPLPIE 720 >UniRef50_C9XYY6 Uncharacterized signaling protein PA1727 n=3 Tax=Enterobacteriaceae RepID=C9XYY6_CROTZ Length = 827 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 113/594 (19%), Positives = 210/594 (35%), Gaps = 36/594 (6%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL---------WRRDIAPSLGKEKRAFTL 217 DL+ + +LI+ M F L I + ++ E+R + Sbjct: 222 HDLIVVILPLLIFLMCFTGLVAGIAMRNALTKARLNDENAFLLEQNRLALAASERRFRDV 281 Query: 218 SWLAALSVLLLLLCTPY-----ENDFIAGY-LVPVFFIIFTLGVGKLRYPFLNLTWAVST 271 + + + I GY + T + + Sbjct: 282 AEATTDWIWETDDDLRFTWLSERFPVITGYRIADWLGRRVTEFIQEDSATLEAWFHQPGH 341 Query: 272 LCLLNYN-QNFLQGVETEYSLAFILAVLISFSVC--LLYMVRIYHRSEWLNRRWHLQALT 328 +L + + + + R +L Sbjct: 342 GGHRAMTHCRYLSAQGHQRYCNLVAKPIATAEGGLSFRGTATDVTLEVEAQARVQYLSLH 401 Query: 329 DPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN +++ E +E + L +D + ++ +G + + + Sbjct: 402 DELTGLPNRVRMKEFLEGKLQSRPTREHPLAMISLDLDKFKPVNDLFGHGVGDELLHQVS 461 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGY 437 L +++ + + + G E +L++ E + L+ + + + + + +G Sbjct: 462 ARLRACLRDFDLVARQGGDEFILIIPDIERKEALEQLCERILAEINRPFSVQDHEILIGA 521 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + LL ++ + + ++ Q ++ + N++R Sbjct: 522 SMGIALAPQDAVNATDLLRFSDIALYKAKSSGRN-GWVFYDAHMAEQIVQRREMENSLRE 580 Query: 498 ALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A+ L QP + + + +L G++ PD+F+PL + L Sbjct: 581 AIRDRQFQLVYQPRYDMNAEKIVAVEALLRWHHPTLGLLMPDQFIPLAEETGLIIAISDW 640 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 VL + + D G SVN+ + + R+ ++P+ + LE+TE Sbjct: 641 VLNAACRDA---QRDMPGLAISVNISAVEFRTPGLVERVQEALNATGLAPERLELEVTEN 697 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 SN E S+ + L G R+ IDDFGTGY++ L+ D IK+D FV + + Sbjct: 698 ATLSNPEQSLELMNGLKALGVRLLIDDFGTGYSSLSYLRTFPFDGIKLDKSFVAGMPHSD 757 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV +I L KA SLS+ AE VETQ+Q A L QGYL+ RP PL Sbjct: 758 NANSIVENIIGLGKAFSLSITAEGVETQEQLAQLKMYQCDETQGYLMCRPLPLE 811 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 127/712 (17%), Positives = 230/712 (32%), Gaps = 33/712 (4%) Query: 46 WMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCA-CAIL 104 + ++ + G +V VL + + +T + L + L Sbjct: 173 VLCTTSRVAASGVDGPVALVCVLQDLSEMVSARNAMMRSETMLRLALEGSGNGVWEWDAL 232 Query: 105 RWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF 164 +L RY Q L + + L+ + + Sbjct: 233 EQRLNFSTGMSALLRYQGQDLAREFDFHQRLHPEDAAGARAQAEQALEQGSMLVLTARLL 292 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 L F A I Q R S T+ Sbjct: 293 CFDGLYRWFRARGQAYKDESGRLIRISGLLSDQTASREADERSRLA----STVVDNTIEG 348 Query: 225 VLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 V++ +L + + G+ + + + ++ Sbjct: 349 VVVTDAHSRILSVNHAFTKLLGFSEAEMLGKTPRMFKSGRHDKAFYDAMWASMHATGHWQ 408 Query: 277 YNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + + L+ + + M + ++ A D LT Sbjct: 409 GEIWNRRKNGEVFPERMSLSAVKDANDKVTHYVCMFTDISAEKAREQQLEFLAHRDTLTG 468 Query: 334 LPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN + + ID + ++ YG + +R + + Sbjct: 469 LPNRSQFTRMLGEAVELSQSTNRRMAVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQG 528 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAW 441 ++ + + +L G E+ +V + L + + + + + A Sbjct: 529 ALRHGDIIGRLAGDEICVVAQSICGRDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGI 588 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + T LL + A A E ++ +++ L +R AL+ Sbjct: 589 CLYPDHALTADDLLQGAHAAVYGAKARGSN-AWCFFHENMTQAARERLALEARLRRALEL 647 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 G + LY QP G + +L L + G+++P +F+P+ + L VL Sbjct: 648 GHMRLYYQPQIELATGRLVGAEALLRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGE 707 Query: 559 LLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + +VN+ L +IAG + + LEITE Sbjct: 708 ACRQGQQWRAAGLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALA 767 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 E ++ + +L + G R+AIDDFGTGY++ LKR D++KID F++DI + D Sbjct: 768 EKPEEALAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDM 827 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I S+ L A L V+AE VETQ+Q + L + G Y QGY RP P D Sbjct: 828 TISSSVIALGHAMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAED 879 >UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8Z9_METSD Length = 828 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 117/581 (20%), Positives = 213/581 (36%), Gaps = 22/581 (3%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS-V 225 V + + + + + + + R ++ Sbjct: 244 VVIDGQVIGTVGFARDITAERWLEAEIARRENEYSMLVQNLPLTVVRYDRECRRVFVNSY 303 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + + + G F+ V + AV + + Q Sbjct: 304 CAMKESLKHNIGQVIGKTPMEFWSG--SIVNITAEEYQQRIMAVMASGESDTLELITQYG 361 Query: 286 ETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 E + + S S ++ + + +R A D LT LPN Q Sbjct: 362 EEQLVHLVRIVPERSASGAVMGAMTVASDVTENSRYRKRIEQLAYHDILTELPNRLLFNQ 421 Query: 343 APE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + G + +DN + ++ G + + + R + L+ +++ L Sbjct: 422 QLQILIEQTPINKHGFCLLFIDLDNFKTINDTLGHSVGDKLLIEVSRRIRQLLGKDDMLA 481 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E + L + + + ++ + + + L Sbjct: 482 RMGGDEFAISLPHCLSRLDAALLAARIIDALNVPFEVSSIKFFVSASMGIAFYPEDSSHL 541 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL + + ++ +++L+ N +R AL +G+L LY QPI Sbjct: 542 DDLLKHADLAMYHAKRQGRN-NFQFYNQELTVNAAERLLMENLLRQALAKGELQLYYQPI 600 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 E G + +L +D G++ PDKF+P+ + + VL + Sbjct: 601 MELATGELHGAEALLRWNSFDLGMVGPDKFIPIAEERGMIVDIGAWVLREGCRTAVAWNA 660 Query: 569 -DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + ++NL +Q++ RI + PQ + EITE +++ + Sbjct: 661 LRSQPCVLAINLSSRQFMQQDFLSRITDCLQETGCHPQWLKFEITESLLLHDSDHIRQTL 720 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 E LH G IAIDDFGTGY+ L + +KID F+ DI TNT A++V++I +A Sbjct: 721 EALHSIGITIAIDDFGTGYSALGYLNKFPVSQVKIDRSFISDIATNTESALLVKAIIAMA 780 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +VAE VET +Q LL +LG QY+QGY GRP PL Sbjct: 781 DSLGKELVAEGVETAEQAKLLSQLGCQYVQGYYYGRPVPLE 821 Score = 42.6 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 15/157 (9%), Positives = 30/157 (19%), Gaps = 5/157 (3%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQI-LWRRDIAPSLGKEKRAFTLSWL-AALSVLLLLL 230 + + + R A+ RR + WL S L Sbjct: 116 LSDEHGQMIGVLAIGRQTDQRDAAETLEIRRREQYQRAVLNTFPFMVWLKDKQSRFLATN 175 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN-FLQGVETEY 289 + IA F + ++ V + + Sbjct: 176 RAFADVLQIAHDEDMRGKTDFDYFPHAMAEGYVADDQEVLASGAAKMLVEPIMNPDGELH 235 Query: 290 SLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + + + R WL Sbjct: 236 WAETYKSPVVIDGQVIGTVGFARDITAERWLEAEIAR 272 >UniRef50_Q2BJL1 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJL1_9GAMM Length = 984 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 107/568 (18%), Positives = 202/568 (35%), Gaps = 28/568 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 F TR I + R S E+ + +++ GY Sbjct: 414 FVISTRDITQSRRDEEHIRLL---SSTVEQSTNEVIITDTDGIIV---YVNPMFTENTGY 467 Query: 243 LVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 L + NL + + ++ + ++ + Sbjct: 468 LPEEAIGRKSSIVQSGEMSAEFYRNLWETIKKDNCWKGEIINRKKSGEKFWQSMSISPIH 527 Query: 300 SFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAG 349 + L + + + R+ QA D LT LPN L Sbjct: 528 DETGAISHYLSLKSDITKQKEAERQLRYQAEHDLLTKLPNRPVLLAEMDSAIDDARNNHC 587 Query: 350 K-SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +DN + ++ G + ++ + + L + + + +L G E ++ G Sbjct: 588 FSAVLFMDLDNFKDVNDTLGHLSGDFLLQLVAKRLEQCISITDVIARLGGDEFAIIQRGI 647 Query: 409 ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 +++ + + + ++ L +G + LL ++ Sbjct: 648 KSKHEPSVLAEKVINAITTPFRVDDHLLHIGISIGITLIPEDGLETGMLLSNADMAMYEA 707 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 A + + ++ L+ + + A++ +L L QP G + + Sbjct: 708 KAIS-GSHYKFFDHDLQLSIQRKRLIESHLHNAINNNELNLLLQPKIEIHTGHIVGAEAL 766 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMP 581 L + G ++P +F+P+ + VL L+ + +VNL Sbjct: 767 LRWHSTEIGQVSPAEFIPIAEKSGQIIELGNWVLNQALQLIKDWCQKGYKIPKIAVNLSA 826 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + L N+ I + + Y + + + LEITE A S+ E S + + +A+DD Sbjct: 827 VQLKDVNLVQDIKKALEHYQVHSEYLELEITETAAMSDPEFSNSQLSAIKAMNITLAMDD 886 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L L D +KID FV DI + I+ SI L K + +V+AE VE Sbjct: 887 FGTGYSSLSYLASLPIDRVKIDRSFVSDIQHSNEARGIIESIIHLGKILNKTVIAEGVEE 946 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q LL +LG QGYLI RP ++ Sbjct: 947 TEQLELLKRLGCHEAQGYLISRPVASSE 974 >UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A017_PELCD Length = 847 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 110/579 (18%), Positives = 196/579 (33%), Gaps = 33/579 (5%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--- 229 ++ + L R I A +L+ A +++ Sbjct: 267 LPMMVGDRKHVFCLCRDITERCEANKALLAREQD-------FRSLAENAPDAIVRYDRQL 319 Query: 230 --LCTPYENDFIAGYLVPVFFIIFTLGVGKLRY--PFLNLTWAVSTLCLLNYNQNFLQGV 285 L + + G + L T + Sbjct: 320 RRLYINPVLERLLGQDKATLLGKPFENHAPVDMTAYQDALEKTFQTGLQQVTEVQYPLPD 379 Query: 286 ETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 T + + + +VR A TD LT LPN E+ Sbjct: 380 GTLGWFHARFEPEFAEDATVKSVMGIVRDITELVEQRELAQHLAFTDMLTGLPNRALFEK 439 Query: 343 APEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 ++ A + L +D+ + ++ G +R + L + E + + Sbjct: 440 RFKEAAAEAKSTDCPFALLMLDLDHFKDVNDSLGHNCGDELLRQVTARLSHCVNECDTIA 499 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E ++L+ + +++ S + + L + F + L Sbjct: 500 RMGGDEFAILLAESRGSDEAGQVADLILSTLAQPFFIESQELFISGSIGIAFFPHDSANL 559 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L + ++ ++ + ++ L ++R A +L LY QP Sbjct: 560 DELFTYADTAMYSAKHKGRN-NFQCYDQELTRHVSAKLSLGASLRYACVNHELQLYYQPK 618 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-P 567 + G + +L G++TPD+F+ + + L VL++ + Sbjct: 619 VQLKDGRVVGVEALLRWWHPVLGMLTPDRFISIAEETGLIVEIGEWVLKTACQAAVDFNR 678 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + +VNL LQ ++A I + K + + EITE + + Sbjct: 679 NATAPFKVAVNLSCRQFLQNDLAATIEAILKTTGCRGEWLECEITESLMIEDNPQVAKTL 738 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 E L G IAIDDFGTGY+ L R D++KID F+ I T+ +V+ L Sbjct: 739 EALRSLGITIAIDDFGTGYSALNYLSRFPIDVLKIDRSFINHIDTDPCKVGLVKVFIALG 798 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + +VAE VET + A L KLG QGYL G+PQP Sbjct: 799 TNLEMQIVAEGVETVSESASLQKLGCGLAQGYLFGKPQP 837 Score = 48.4 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 7/108 (6%), Positives = 21/108 (19%), Gaps = 4/108 (3%) Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV---GKLRYPFLNLTWAVSTLCLL 275 L +L + GY + + + Sbjct: 187 IAVIDGETLKVLDVNPAFAEMLGYEPGEMLGMHPWEWDACRSRAQIESRAFSSQVSYEEY 246 Query: 276 NYNQNFLQGVETEYSLAFILAV-LISFSVCLLYMVRIYHRSEWLNRRW 322 + + T ++ ++ + + R N+ Sbjct: 247 FFETIMKRKDGTLRNVEVNSLPMMVGDRKHVFCLCRDITERCEANKAL 294 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 5/115 (4%), Positives = 22/115 (19%), Gaps = 8/115 (6%) Query: 207 SLGKEKRAFTLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 + ++++ + + GY + + Sbjct: 46 FQETGALHLAFMESSIDGIVIMDGASGGVVEANAAFAEMLGYSMEELRRLHVWDWDAQWS 105 Query: 261 PFL-NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYH 313 L A + + + + + + +V+ Sbjct: 106 KDELRLIIANTGFSNQRFETRHRRKDGQILDVEISATKIQWLDKLFVFCVVKDIS 160 >UniRef50_Q07VY4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07VY4_SHEFN Length = 696 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 110/527 (20%), Positives = 177/527 (33%), Gaps = 38/527 (7%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTW-----AVSTLCLLNYNQNFLQGVETEYSLA 292 + G I F+ + + A+ + L G +L Sbjct: 170 RMLGMQPQEIDITFSKLLEIIHPDDREFLKLTVKTALKHRQPYDIEYRVLHGSGEIITLH 229 Query: 293 FI--LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 + + + + + A D LT LPN R Sbjct: 230 DRTDITYDFGEP-RINGTLHDISSRKKSEQEIAYYAFYDTLTDLPNRRKFLLQLDSAIAS 288 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-------------E 389 + + +D+ + ++ G + + ++ E Sbjct: 289 AKRHSTKLALLFIDLDHFKRINDTLGHKAGDELLCETATRIKSSVRISDELSVGSRVDYE 348 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 NE L +L G E L+L E + + + S+ + + Sbjct: 349 NEHLARLGGDEFTLLLCELEAFDNVAIIAQRVLDALSKPFVIQGQQTFISASIGISFYPD 408 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD-QGDLL 505 + E+ LL + + + ++ + +R A+ + Sbjct: 409 DGESGDILLQHADTAMYEVKHNGKN-GYQLFSHEMHKSLMDRLKIEVELREAIRLGDQFV 467 Query: 506 LYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + GY+ +L G++TP FL + L L Sbjct: 468 LYYQPQIDSANDNIVGYEALLRWNHPTRGLLTPIDFLAIAESSGLIIPIGEWALLEACSK 527 Query: 563 LATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 R +VNL L NI + R + P + LEITE SN + Sbjct: 528 AKQIHIADANFQRMAVNLSALQFNHANIFDHVKRALVETGLPPNLLELEITESAIISNVD 587 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 ++ + L K G ++AIDDFGTGY++ LK D +KID FV IV+N DA I R Sbjct: 588 EAIALLFMLKKLGVKLAIDDFGTGYSSLNYLKSFPIDTLKIDKSFVDGIVSNQKDAAIAR 647 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I LA LS +AE VE +Q LL +G LQGYL +P P Sbjct: 648 TIVQLALNLELSTIAEGVEYIEQHELLKAMGCTNLQGYLYSKPLPPE 694 >UniRef50_C6X7M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7M1_METSD Length = 1237 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 115/569 (20%), Positives = 192/569 (33%), Gaps = 27/569 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIA 240 I R +E+ +L + ++ L Sbjct: 652 FIHQASHLVAIAIERHRSDTQLQERERELRSLLDNSPDTITRYDANCRRLYVNQRMLEYF 711 Query: 241 GYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 V G + A T + Sbjct: 712 DTTPDVVLHTTPRDFPGGSVTVEYEARIRQAFLTGQPDELELPLKASNGKLLVRHIRMMP 771 Query: 298 L---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------- 347 +L + R +R H A D LT LPN L + Sbjct: 772 EFNPDGTVASVLAVGRDITEIVEYRQRIHDMAFYDALTRLPNRAMLLEQMRSGILAAAGA 831 Query: 348 -AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 S L +D + ++ G + L ++E + L ++ G E +L+L Sbjct: 832 QQVFSLMVLDLDRFKQINETLGHSTGDLLLCEAAARLQDHLREGDMLARMGGDEFVLLLR 891 Query: 407 GPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + E L M L + L + R+ + + LL Sbjct: 892 PGDAEPELIAMAQTLIQAFRQPFLVAGRELFVSTSVGIARYPTDSQDADTLLKFADTAMY 951 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYD 520 + A ++ ++ ++ L +R A+ Q +L LY QP + G + Sbjct: 952 HAKAQGRN-NFQFYVSALTEVSSARIELETMMRRAIQQQELELYYQPQWDLLENRIVGVE 1010 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNL 579 +L + + G+M P+ F+P+ + L VL + + + + +VNL Sbjct: 1011 ALLRWNQTEHGLMMPNVFIPVAEETGLIIELGEWVLTTACRQAVQWNKDKDEPLKIAVNL 1070 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 +Q + + R+ P+ + LEITE + + + G I+I Sbjct: 1071 STRQFIQNPLLASVTRILHETGCRPEWIKLEITESLLLESNLDILNTLNAFDAMGLVISI 1130 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY+ L R IKID FVKD+ +T + +V+++ +A +L VVAE V Sbjct: 1131 DDFGTGYSALSYLNRFPVKQIKIDRSFVKDVPHDTHKSELVKAMISIAHVLNLDVVAEGV 1190 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ETQ Q L G + +QGY GRP PLA Sbjct: 1191 ETQVQSDYLKASGCRAVQGYFYGRPMPLA 1219 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 16/165 (9%), Positives = 34/165 (20%), Gaps = 8/165 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + S + + + I + + A+ L Sbjct: 102 HVWLSSSFSPIRSQDNTLLFYLLRIENITDRKLGEQHRVLMNFALNQVSEAAYLLDENDR 161 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFF-IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 L GY + T S L Sbjct: 162 ------LTYVNDAACHALGYSREELLQMEMGDIHRDGWPEITRTTLNNSAAPHLVAEAMH 215 Query: 282 LQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHLQ 325 + +++ + ++ V L MVR + ++ Q Sbjct: 216 TRQDGSQFPVEIHASLFEYEGVPYRLVMVRDIGDRKAAEQQLRSQ 260 Score = 48.8 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 42/195 (21%), Gaps = 29/195 (14%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFFII-- 250 ++ LA +S+ ++ + GY Sbjct: 4 TYLVDAQKALADSKQLLAMAGDLARISMAIVDTDGHWLAANTPCCQQLGYEEAELLNTSY 63 Query: 251 -FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 + R L ++ C F L+ + + S L Sbjct: 64 CDLVHPEDRRAEKLTWREVLAACCAQPLEHRFKHRSGRHVWLSSSFSPIRSQDNTLLFYL 123 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRH 366 + + + + A Q + ++ D L +++ Sbjct: 124 LRIENITDRKLGEQH---------------RVLMNFALNQVSEAAYLLDENDRLTYVNDA 168 Query: 367 YGLMMR---VHCIRS 378 + ++ Sbjct: 169 ACHALGYSREELLQM 183 Score = 42.3 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 12/191 (6%), Positives = 38/191 (19%), Gaps = 23/191 (12%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 P ++ + + R I Sbjct: 204 SAAPHLVAEAMHTRQDGSQFPVEIHASLFEYEGVPYRLVMVRDIGDRKA-------AEQQ 256 Query: 207 SLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFI---IFTLGVGKL 258 +E+ TL V+ + + + + + Sbjct: 257 LRSQEQLYHTLVDHLPDPVIRYDSEGKRVFLNPVAEALLQRPTAELLGKTSLELNPASQA 316 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--------SFSVCLLYMVR 310 +++ V + F+ ++ + + + +L + R Sbjct: 317 LQEYVDRVKHVVATGEASDFDFFMDRQPSDLQVHNKVIAVRMVPERDPEGRIAGVLAVGR 376 Query: 311 IYHRSEWLNRR 321 + R+ Sbjct: 377 DVSMLKEAQRK 387 >UniRef50_B9Z647 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z647_9NEIS Length = 1072 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 106/588 (18%), Positives = 221/588 (37%), Gaps = 26/588 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 A TV+D T + + I + + R Sbjct: 457 AARTVLDAEVPLTDDDDQVRGGILVEQDITAQQVIDLELRVRQRAIEASVNAVLITDNRR 516 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + ++ + I GY F G + + A+ Sbjct: 517 PDNPII---YVNPAFERITGYARATVIGRNCRFLQGRDTAQPELTAIRRALENRHEGKAL 573 Query: 279 QNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + + +A + + ++ ++ QA D LT LP Sbjct: 574 LRNYRKDGSMFWNELRVAPVRDSQGEVSHYIGVLNDVTEAKRYQEELERQANFDTLTGLP 633 Query: 336 NFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L+ Q + L +DN ++++ G + + + R + + Sbjct: 634 NRNLLQDRLGQGIAVARSKDERFAVALLDLDNFKYVNDSLGHTLGDALLIEVARRIESSV 693 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 + +L G + +L+L G +T +L + + ++ + + T L + + Sbjct: 694 PALATVSRLGGDDFVLLLPGVKTAEQLDLALKNVTDQLNQPVELSGTELFLSASIGCCFY 753 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + ++ LL Q+ A + ++ + ++V L +R A+ Q +L Sbjct: 754 PDDGSSVDELLSNADTAMYQAKALGKSQ-VRCFALHMNDRVQRRVELEGALRRAIAQDEL 812 Query: 505 LLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +Y QP + G++ +L + + +++P +F+P+ + L D V+ ++ + Sbjct: 813 TMYYQPQLDLQSDRLCGFEALLRWRRGER-LISPLEFIPIAEETGLIREIDRYVIRAVFR 871 Query: 562 WLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + + P ++N+ L+L + I I + P A+ LE+TE N Sbjct: 872 QVEEWRAEGLDPGEVAINISALSLQEAGIVPYIAAEMASRRLPPDAIKLEVTESLLMKNV 931 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 +++ + +L + +IDDFGTGY+ L+R D +KID F+ D+ N +A + Sbjct: 932 DTAQQVMSELKALHLKWSIDDFGTGYSALSYLRRYPFDQLKIDKSFIDDVNVNPENASMT 991 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 R+I +A++ ++V+AE VE ++Q L + G +QGY P Sbjct: 992 RAIISMARSLRIAVIAEGVENREQLGFLVEAGCDQIQGYYYSPPLTAE 1039 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 28/299 (9%), Positives = 65/299 (21%), Gaps = 21/299 (7%) Query: 46 WMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVL-CACAIL 104 + + + F G + + + + + C C Sbjct: 206 VIGRALEEVLAFPDGAAAWLLLADTQALA-EPMQLAGWNGRLDEPALRRAIADGCPCLYA 264 Query: 105 RWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF 164 Q R + + + ++G + A F Sbjct: 265 GRQEELRQAFNIAQCPALSGAGEGHWHACSPLLLGDEVIGVLNVLRAGRVPWDEPALDAF 324 Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI----LWRRDIAPSLGKEKRAFTLSWL 220 T+ + L +F L ++ A R A E + Sbjct: 325 TM--IGRQLAVALARARMFESLESLVAERTRALRSEMGERARAEAALRQSEALLHKVLET 382 Query: 221 AALSVLLL-----LLCTPYENDFIAG--YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 + V + +L E + I G + ++ L + Sbjct: 383 LPVGVWVTDEKGGILLHNSEGERIWGANPGTEPQRRWYGPQGQQIATDDRELLRTIRHDG 442 Query: 274 LLNYNQN-FLQGVETEYSL---AFILAVLISFSVCLLYMVRIYHRSE--WLNRRWHLQA 326 ++ L ++ L + + + + L R +A Sbjct: 443 TVHNLVRQILSFDGAARTVLDAEVPLTDDDDQVRGGILVEQDITAQQVIDLELRVRQRA 501 >UniRef50_UPI0001C42794 probable signaling protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42794 Length = 634 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 93/615 (15%), Positives = 197/615 (32%), Gaps = 92/615 (14%) Query: 204 IAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVPVFFI---IFTLGVGK 257 + L+ + +++ + I+ Y Sbjct: 7 VRDLSLTSHILHALNEASIIAITDNKGTITFVNDMFCKISKYDRDELLGQNHRMLKSSYH 66 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHR 314 F++L +S + + Y + + + + + Sbjct: 67 SSDFFVHLWRTISRGKVWRGEVKNKAKDGSFYWVHTTIVPFLDSRGKPYQYVSIRTDITE 126 Query: 315 SEWLNRRWHL----QAL-----------------TDPL---------------------- 331 + A D L Sbjct: 127 RKCTEELLKRSLDQLANSNRKLLDHHHTPSQTTIHDDLGQSIDESMAAYPEIRQLMTQFN 186 Query: 332 ----------------------TLLPNFRALEQAPE--------QEAGKSFCCLRIDNLE 361 T LPN +E+ + + + L +D + Sbjct: 187 EMNIRINQARKRIEHQAYHDALTGLPNRYHIEEYLKRSIEYAKVNNSSLTLLYLDLDRFK 246 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + ++ + L + EN + + G E L+VL E ++ + + Sbjct: 247 LVNDLLGHQVGDLLLKEVAEKLSQTICENGMIGRQGGDEFLIVLEDM-NEEEVRAIAGRI 305 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 S + + F + ++ ++ + Sbjct: 306 LDCLSYPFVYAGKEFFISPSIGISMFPKDGNDIESMMKNADTAMYMAKERGKN-NFQFYS 364 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 S +++ LL N +RTAL + +L QP + E G++ ++ + G+++P Sbjct: 365 SEPSSLLSRRHLLENKLRTALKNKEFILNYQPQVHLNSHELRGFEALIRWNNPELGLISP 424 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRII 594 ++F+P+ + + VL+ + S+N+ ++ Sbjct: 425 EEFIPIAEETGIITDIGTWVLKEACRQNKAWQEQGFVRVPVSINVSSQQFRDPEFVWNVL 484 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + K + PQ + +E+TE + ++ ++ + ++G ++AIDDFGTGY++ L + Sbjct: 485 NVLKESKLHPQYLEIELTESTT-HHFVHTVEKLQLIKQYGIKVAIDDFGTGYSSLSALDQ 543 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L DI+KID F+K I+TN A I ++I DL ++AE +E Q L++ Sbjct: 544 LPIDILKIDRSFIKHILTNPNKAAIAKTIIDLGHNLDFKIIAEGIEEPSQADFLNEHQCH 603 Query: 715 YLQGYLIGRPQPLAD 729 QG+L P D Sbjct: 604 IGQGFLFHPPLNPTD 618 >UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Rhodopseudomonas palustris RepID=Q2J3Q8_RHOP2 Length = 743 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 110/587 (18%), Positives = 209/587 (35%), Gaps = 29/587 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 T+ +L SL L + L R + + R R Sbjct: 146 TLRELASLVADQLDLRLANRRLAREVAERERTENHLRSMSRTLELSNLRLDAALNNFLHG 205 Query: 225 VLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT---WAVSTLCLLN 276 + + + I +L + W+ L + Sbjct: 206 LCMFDGDRKVVVSNARFAGIYSLRPDEIRCGVSLSAIQSACRERGTFVESWSERRLGRCS 265 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + + ++ ++ + + + ++ A D LT L N Sbjct: 266 DDISEVSSLQDGRTILVRCQPVAG--GGWMTVHEDITERYRSEQQIAHMARHDLLTGLLN 323 Query: 337 FRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 A + ++ S L +D + ++ G +R++ L ++ Sbjct: 324 RGAFHERMDEACARLRRWGETFSVIMLDLDRFKLVNDSLGHPAGDALLRAVVSRLKACIR 383 Query: 389 ENEKLYQLPGSELLLVLSGPETE-GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRF 444 E + L +L G E ++ + + + + + I + L + A Sbjct: 384 ETDVLARLGGDEFAVLQTRTKDSYNEAVAFADRIVNCLIDPIEIDGHQLVISTSAGIALA 443 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + L+ ++ A + E + + + L +R A+ + Sbjct: 444 PQHGTDSDELIKNADLALYRAKAAGRN-GYVTFETAMKDRANARQQLEGELRQAILNREF 502 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LY QP + G + +L G + P +F+P+ + L + VL+ Sbjct: 503 DLYYQPQVEARSGRVIGAEALLRWRHPRRGFVPPSEFIPVAEETGLIEKLGEWVLKEAAA 562 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 P + ++NL P+ L + N+ + + + + P+ + +EITE + Sbjct: 563 EAIRWPA---PIKLAINLSPVQLSRGNLTDTVTQALRLSGLPPERLEVEITENVFLEDEV 619 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 +++ I QL G +A+DDFGTGY++ L R D IKID F +++ + A IV Sbjct: 620 NNLAVIRQLRSLGVSVALDDFGTGYSSLSYLTRFPFDQIKIDKFFSMNLIERSDCATIVS 679 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 S+ LA+ +S VAE VET +Q LL + GV Y QGYL G P P + Sbjct: 680 SVITLARGLGISTVAEGVETVRQFELLREAGVDYFQGYLFGHPVPAS 726 >UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47U99_COLP3 Length = 1534 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 104/548 (18%), Positives = 203/548 (37%), Gaps = 26/548 (4%) Query: 205 APSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGV--GK 257 + + + V ++ + + + F L K Sbjct: 970 RANEERAQYYGDAFQQTQDWVFIIDEKISRITANQSMRAVFDWPEEEFDFSDKLLGVSQK 1029 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHR 314 R + L ++ + + + EY + + V S L+++ Sbjct: 1030 RRSFYRKLMLSLKEGEHWRGEELIVTANKDEYHVIINVTVGFSSVTNALHYLFVLTDISA 1089 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + L A D LT LPN L + ++ + + +D + ++ Sbjct: 1090 QKSAESELRLLANYDHLTGLPNRTLLLERIKHAIDFSNRRDTSIAVFFIDLDRFKQVNDS 1149 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--- 423 G +R I L ++ ++ + ++ G E +++L E +L + + Sbjct: 1150 LGHDFGDLLLREITNRLQSTLRIDDTVARIGGDEFVVLLESFANENQLGRIAEKVIDTIG 1209 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + + + +G + + LL + ++ Sbjct: 1210 QSVDLDGNLVSVGASVGIALYPNDGINSDELLRHADVAMYHAKQAGK-SNFKFYTAQMNV 1268 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 + +++ + ++ A+ + + + QPI N + G + ++ G++ P F+P Sbjct: 1269 EAMERLSQESALKLAVKNNEFINHYQPIINAYTGKAVGVEMLMRWQTST-GLVPPSDFIP 1327 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 L + NL LE + K L + S+NL ++ +I I L RY Sbjct: 1328 LSEELNLIITMTEMALERVCKDLKEWHTIRPEFYVSINLSVQHFVEADIVSFISELLARY 1387 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + +E+TE E+++ + +L G +A+DDFGTG+++ LK+L DII Sbjct: 1388 QLPAAILRVEVTESSLILQPENAITTMRKLSSLGLTLALDDFGTGFSSLSYLKKLPLDII 1447 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV I N D IV + LAK ++ +AE VET +Q L YLQGYL Sbjct: 1448 KIDRSFVAGIGINEADEAIVDTTLVLAKRLNMHCIAEGVETVEQFNYLVAKQCHYLQGYL 1507 Query: 721 IGRPQPLA 728 +P Sbjct: 1508 YSKPSSAE 1515 Score = 55.0 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 12/175 (6%), Positives = 40/175 (22%), Gaps = 7/175 (4%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 F + ++ +++ + + ++ Q+ +R + + Sbjct: 804 FAPWRSPLAILLYSIALMLMMVTWYRYRKTQQQLLLDVHEQVKYRENRLQLALTGSNSEV 863 Query: 217 LSWLAALSVLL---LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 W A ++ + L Y + L +I + + + + Sbjct: 864 WDWQADEDLIFGKRISLDLGYREKALFYSLEEHVALIHPEDHDNFIHCWQLFISSANLKD 923 Query: 274 LLNYNQNFLQGVETEYSL----AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + + + V + S R Sbjct: 924 NFSCTYRLKTSDGQWFWYKDLGKIVAVDANNHPVRVTGSYTNITESRANEERAQY 978 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 116/624 (18%), Positives = 211/624 (33%), Gaps = 39/624 (6%) Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 I + G+ + L + + + + I + Sbjct: 386 AAIARMLQGAGTLTT----DRRLRQADGRTRWLRWLDLPVLDEEGRCVEVHSIGQDITAQ 441 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---II 250 ++ R+ T+ + GY Sbjct: 442 KEVELRLRQLALAVEQSPN---TIVITDTDG---RIEYVNEAFVRTTGYTAAEAIGQNPR 495 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLY 307 + +L + + + Y+ +A + + Sbjct: 496 LLNAGKTSAATYADLWATLGRGEVWRGEFINTRKDGGTYTELATIAPIKQADGSVSHYVA 555 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDN 359 + R A D LT LPN + S L ID+ Sbjct: 556 IKEDITGRREAEARIRQLAYYDTLTGLPNRSLMWDRLRHAIAASARSGASGMLMLLDIDH 615 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----L 414 + ++ G + +R + + L ++E + + ++ + +V+ + Sbjct: 616 FKLLNDTQGHEVGDALLREVAQRLRGALREEDTVARVGDDDFAIVVENLGADRDEAIGRA 675 Query: 415 QHMVNILNS---RQIHWN--NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + L+ + +G F G +L Q ++ Sbjct: 676 EKIAEHLHRCVTAPCELGLASGPYHVGASLGLTLFRGRNAAADAVLKQAEVAVARAKDDG 735 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLK 527 L + E + + L +R AL LY QP + G + ++ Sbjct: 736 RNL-IRFFSEAMQAVVAARAELELKLRAALACNGFRLYYQPQLDRNGRVIGAEALIRCFD 794 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLL 585 +G +++P F+PL + L VLE+ L G S+N+ Sbjct: 795 AEGEMISPAAFIPLAEETGLIVPIGEWVLETACAQLRAWQRTPSTAGLSLSINVSARQFH 854 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + G++ +R+ I P + +E+TE + E+++ + Q+ G R A+DDFGTG Sbjct: 855 QPDFVGKVAAAIERHRIRPGGLEIELTESVVIGDIETTVLRMRQIKALGVRFALDDFGTG 914 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL D +KID +FV+D+ +T IVR+I L+++ L VVAE VET Q Sbjct: 915 YSSLSYLKRLPFDQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLDLKVVAEGVETAAQH 974 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 LL G + QGYL GRP P+ D Sbjct: 975 ELLLTRGCELFQGYLFGRPVPIED 998 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 31/138 (22%), Gaps = 11/138 (7%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVF---FIIFT 252 R ++ L + LL + G I Sbjct: 316 HRSRRQLARSKRSFDALIDSRREATCAWRPDTTLLTCNERYAELLGTEAASLPGTRWIDN 375 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMV 309 + K + + L ++ Q L ++ ++ + + Sbjct: 376 VPEAKRAEVHAAIARMLQGAGTLTTDRRLRQADGRTRWLRWLDLPVLDEEGRCVEVHSIG 435 Query: 310 RIYHRSEWLNRRWHLQAL 327 + + + R AL Sbjct: 436 QDITAQKEVELRLRQLAL 453 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 104/452 (23%), Positives = 174/452 (38%), Gaps = 25/452 (5%) Query: 301 FSVCLLYMVRIYHRSE--------WLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 L + +R A D LT L N L Sbjct: 343 EIEQLSATFTTMTQRLENSRAIQLQSEQRLEHLATHDELTGLANRTLLLDRLDHAIEEGM 402 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 Q + + +D + ++ G + I + L ++ + + +L G E LV Sbjct: 403 RQHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKRLCQHVRSTDTVSRLGGDEFALV 462 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L E L ++ L H +N + + F + LL Sbjct: 463 LGDLNNEESLIPLMQDLLKEISSPCHIDNHHIVVTASIGISLFPNDGNDSITLLRNADLA 522 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 QS H ++ K + L +R AL++G+LLL+ QP + + G Sbjct: 523 MYQSKRHKGD--FTFYSSDMNQHAVKILELEKDLRQALERGELLLHYQPKVSLQSGKIVG 580 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSV 577 + ++ G+++P F+PL + L VLE + + + +V Sbjct: 581 CEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWVLEQACQQAISWQQQQLPTITMAV 640 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL N+ + + + + P + LEITE + E ++ + L + G + Sbjct: 641 NLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMIALKERGVLL 700 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 ++DDFGTGY++ L+R D +KID F++D+ ++ A + SI D+A L+ VAE Sbjct: 701 SLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAHHLGLTTVAE 760 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET +Q L K LQGYL RP P D Sbjct: 761 GVETVEQLDFLEKCHCDILQGYLYSRPLPAED 792 >UniRef50_C0QA93 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA93_DESAH Length = 629 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 105/568 (18%), Positives = 201/568 (35%), Gaps = 39/568 (6%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL----LCTPYENDFIAGYLVP-V 246 + ++ + + + PY F+ G + P Sbjct: 38 EIQDMETALFGAETQTMASGTFEIDCVFQGREGLAQVQKAKSEGRPYSLAFVDGRMPPGW 97 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 I + + + + + SL + + V +L Sbjct: 98 DGIETISHLWQESPDLQVVLCTAYADYSWQ---EIRRVLGETDSLLILKKPFDN--VEVL 152 Query: 307 YMVRIYHRSEWLNRRWH----LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + R LN A D LT LPN + + + Sbjct: 153 QLAHALTRKWELNNEIQGRLNQLAFYDSLTGLPNRTLFIENLTTTLDKAHRYKHKAALLY 212 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL---------YQLPGSELLLVL 405 + +DN + ++ G + +++ + LL ++ ++ + +L G E ++L Sbjct: 213 IDLDNFKRINDTLGHSIGDDLLKATSKRLLKCLRTSDTVSRSPAGEMVARLGGDEFTVIL 272 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + + +H N + + F + E ++ LL Sbjct: 273 PEVTRAEHAGVVALRIAKQLAEPLHLGNHQVIVTPSIGISLFPQDGEDIETLLKNADIAM 332 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 S + E+ ++ K++ + N +R AL +G+ L+ QP + E G Sbjct: 333 YFSKRMGPNM-FSFYEQSMNADALKRMTIENHLRQALGRGEFALHYQPQFDLVTGEVCGA 391 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + +L ++ G + P +F+ + + + V+ + + T R +VN Sbjct: 392 EALLRWHNWELGNVPPIEFISIAEENGMIVAIGEWVMRTACRQTRTWLDQGLPLQRIAVN 451 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + + + + + PQ + +EITE N + + L K RIA Sbjct: 452 VSVNQFTHTDFLNMVKSILEETTLDPQYLEIEITESLLVKNVPETTNILHALKKMNIRIA 511 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ RLK + D +KID FV I D I+ +I +A+ +L ++AE Sbjct: 512 IDDFGTGYSSMSRLKEIPIDCLKIDKTFVDGIAIGKRDQSIITAIIAMAEGMNLRLIAEG 571 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQP 726 VET Q L Q +QGYL +P Sbjct: 572 VETTGQVDFLRVKQCQEVQGYLFSKPLS 599 >UniRef50_Q4ZXA9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZXA9_PSEU2 Length = 748 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 114/703 (16%), Positives = 222/703 (31%), Gaps = 73/703 (10%) Query: 95 FVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYL--VGSFFDFPLK 152 A ++ G + WL +V+ G + + Sbjct: 30 ASCTAALLMVSSATGWEQLVSCGQSLLKADEAWLRMVSSYGDVVLVGQDSPANAIQTNSP 89 Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR--MIVSPHFAQILWR-----RDIA 205 +T A F L ++ + M+ R + + + Sbjct: 90 GTTLIYVAIRGFRHELLGAMLLSNSDGAMVLSAAQRYALQAQAVHIRTYLQPGRDPEANN 149 Query: 206 PSLGKEKRAFTL---SWLAALSVLLL-----------LLCTPYENDFIAGYLVPVFF--- 248 P + +R L A ++L+ ++ I G+ Sbjct: 150 PLVTSFERLRLLESVVINANDAILITEAEPIDLPGPRIVYCNPAFLAITGFTEEEVIGRT 209 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 R + A+S + + +++ + + + + Sbjct: 210 PRILQCEDTSRATLDIIREALSHWRPVEVELLNTRKDGSQFWVELSIVPVANEKGWFTHW 269 Query: 306 LYMVRIYHRSEWLN---------------------------RRWHLQALTDPLTLLPNFR 338 + + R + A D LT L N Sbjct: 270 VSVQRDITERKESQQLAQRARLEWEEKLALQSRLEERERMSEELTYIAFHDELTSLFNRA 329 Query: 339 ALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L + L +D + ++ G + ++ + L ++ N Sbjct: 330 YLMNELTTAFETRKSRYERATVLFLDLDGFKVVNDSMGHLAGDQLLKGVANRLQTCVRSN 389 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGN 447 + L ++ G E ++L G + M + S+ I + + + Sbjct: 390 DVLARIGGDEFAILLMGKDQPETAVKMAERIVSQLNTAIQIEGQDIFISCSIGIVSAGES 449 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL + + +++ N +R AL+ D L++ Sbjct: 450 HTKPEELLRDADVAMYSAKKQGRGR-WSIFNTSMREAAIDTLMIQNALRQALEDKDFLVF 508 Query: 508 AQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + G + ++ GI++PD F+P+ + V+ + Sbjct: 509 YQPIYSGNCEHLVGVEALVRWNHATMGIISPDAFIPIAEDLGIIHELGAWVMHKACSEVQ 568 Query: 565 THPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + R +VN+ L R+ R+ + + +E+TE ++ Sbjct: 569 AWRKEFSHLDLRLNVNVSGKELSHPGFVDRVTRIIASTGLPATQLQIEVTESVFLYQPDA 628 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + Q+ + G R+A+DDFGTGY++ + R D +KID FV ++T IV S Sbjct: 629 IAEILRQIRQLGVRVALDDFGTGYSSLGYIDRYPIDAVKIDRSFVSRMMTYERSEAIVSS 688 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I L +A +L + AE VET +Q LL K+G Y QGYL+ RP Sbjct: 689 ILSLGRALNLDITAEGVETAEQYNLLRKMGCPYFQGYLLNRPM 731 >UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1V4_BACS4 Length = 840 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 103/559 (18%), Positives = 203/559 (36%), Gaps = 24/559 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I A + + + W +S ++ C+ L + Sbjct: 268 DITEQKEANQRLVDNEKQARIIFNNLDEIIWSIDISSRKVIFCSNGFEQLFGYCLDDLID 327 Query: 249 IIFTL---GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + +S L + + +I Sbjct: 328 ERQLWQKVIHEEDIKGIPEKLITLSQGNQLKFECRVQHTSAEVRWIEIKALPIIDDLGDF 387 Query: 306 L---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL----EQAPEQEAG----KSFCC 354 + ++R + L+ + H A D LT LPN R+ + S Sbjct: 388 IRVDGIIRDITEKKKLDAKMHHIAHHDHLTNLPNRRSFDIKLHELIHHAKKTKSIFSVFY 447 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L ID + ++ G ++ I L ++ ++ + + G E ++L TE + Sbjct: 448 LDIDRFKHVNDMLGHNYGDDLLKEISYRLKQVL-QSHFIARTSGDEFAVLLHDV-TEEEV 505 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + H + + + + E LL + Sbjct: 506 IVFAHNIVNVMRQAFHISEVESYVTASIGIAFYPKDGENAVTLLKNADTALSFAKIDGKD 565 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ + L +R AL++ + L QP + K+ G + ++ Sbjct: 566 -NYKHYIPEMNEDSHNIYFLEKDMRLALEKEEFYLEYQPKIDVKTKKVIGCEALIRWTHP 624 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 GI++P +F+P+ + +L V++ + K L + S+N+ LL+ Sbjct: 625 KRGIVSPAQFIPIAEESDLICDIGNWVIKKVCKQLKKWHLEGINTVPVSINISAQHLLKT 684 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ I K H+SP + LEITE +S I L K G ++++DDFG GY+ Sbjct: 685 SLLDTIFTALKANHVSPSLLELEITETSLIQPNQSVFSTIRSLKKLGVKLSLDDFGVGYS 744 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + +++ D +KID F+ + T DA+I+ SI ++A L+++AE VET++Q Sbjct: 745 SLTHIRKFPLDTLKIDKSFISKVPTEKDDAVIISSIIEMAHGLGLTILAEGVETEEQLLF 804 Query: 708 LHKLGVQYLQGYLIGRPQP 726 L + ++QG+L +P Sbjct: 805 LEEKNCDHIQGFLFSKPIS 823 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 33/127 (25%), Gaps = 8/127 (6%) Query: 206 PSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 L E+R +L + +L + GYL+ F + K + Sbjct: 26 ELLRTEQRYKSLFHNNPTPIFTMNSSFMLDSCNDAFYILTGYLIEEIHDNFHTFIRKSQQ 85 Query: 261 PFL-NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEW 317 + + + N + E + L + + ++R + Sbjct: 86 AYTTDCMKKAISGEANQLNIFIVNKQGKEIEVLLSLIPITVNERIEGIYGVIRDISQLRI 145 Query: 318 LNRRWHL 324 + Sbjct: 146 YEKNLSF 152 Score = 49.2 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/155 (9%), Positives = 36/155 (23%), Gaps = 10/155 (6%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW----LAALSVLLLLLCTPYENDF 238 Y + R I + + A SW + + D Sbjct: 133 IYGVIRDISQLRIYEKNLSFIERSLNNAQYIANIGSWDYDPHNDKLYWSKQMFRIFGLDE 192 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + + + A+ NY + + + + Sbjct: 193 KTNTAPSMEQYLKYVHHDDRLRDIVAIQDAMEKKKSFNYESRIFRKDGMKRIVKIQGNPI 252 Query: 299 ISFSVCLLYMV---RIYHRSEWLNRRW---HLQAL 327 I ++ ++ + N+R QA Sbjct: 253 IDNEGNVVKIIGNTHDITEQKEANQRLVDNEKQAR 287 >UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXD5_MARAV Length = 709 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 99/585 (16%), Positives = 205/585 (35%), Gaps = 32/585 (5%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + V + F + I ++ R + + Sbjct: 102 PYWVHTYCTPVDGADGVEPGFVVIQTNISDRKNSERGLRIAASVFDRSHEAIVITDH--- 158 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 L ++ I GY R + ++ ++ Sbjct: 159 ---LNHIIDVNPAFSRITGYSRQEVLGLNPSILSSGRHSREYYRSMWQSIEKTDHWRGEV 215 Query: 280 NFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + EY ++ + + + + A D LT LPN Sbjct: 216 WNRRKNGEEYVELLSISRVHLEEPGKHYYVAAFSDITALKNHAKELDRAANYDDLTGLPN 275 Query: 337 FRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 + LE+ Q+ + C L +D + ++ G +R + L ++ Sbjct: 276 RQLLEERLRSAKAHADRQKRSLAICYLDLDGFKGINDELGHDFGDEALRMVAERLTRSLR 335 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 + + ++ G E +L++ G + + + + S + +++ + Sbjct: 336 SGDTVARIGGDEFVLLIQGDHS----EPLYQRILTSVSEPFELADKEVNLTASLGVTLYP 391 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ + + ++ L I AL+ + Sbjct: 392 EDDTDAEGLVRHADQAMYAAKEKGRNQ-FHIFDPGQYAFRKERRNQLMEISRALENEEFE 450 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + + ++ ++ + G++ P FLP +A +L VL+ + Sbjct: 451 LYFQPQLRMADCQVIAFEALIRWNHPEKGLIAPGAFLPAVANSHLEIPLGQWVLKEAIHQ 510 Query: 563 LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAE 621 + + S+N+ L+ + + + + +SP + LE+ E A + + Sbjct: 511 MNRWREAGEALAVSINISAPHLMDRKFVDYLEGYLQSHPEVSPGQITLEVLESTALEDTK 570 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + + + G ++A+DDFGTG+++ L+ L D+IKID FV++++T+ D IV Sbjct: 571 RASNVLARCQSLGLQVALDDFGTGFSSLTYLRTLPVDVIKIDQSFVRNMLTDANDRAIVE 630 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 S+ LA+ V+AE VET A L +G +QGY I RP P Sbjct: 631 SVIFLAQRFDHPVLAEGVETMDHAAALRDMGCNLVQGYGIARPMP 675 >UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KC5_SACD2 Length = 823 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 108/575 (18%), Positives = 213/575 (37%), Gaps = 40/575 (6%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYL 243 ++ + ++ + E R TL+ A + + L L I G Sbjct: 240 LVDVFNAMLNNLAKENEALVVSESRFRTLAESAPIGIFLRNENFETLYVNDRWCAITGQP 299 Query: 244 VPVFFIIFTLG-VGKLRYPFLNLTWAVSTLCLLN-YNQNFL---QGVETEYSLAFILAVL 298 + + + + + + + + + + Sbjct: 300 HGCSRQEYLKSISDYDLRNYEGMIEGLRSGSVGQTIEYRYRAPGRLNDHILMEYVTPLEV 359 Query: 299 IS------FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + V + A DPLT LPN R + Sbjct: 360 KEGVSGEHQVRGYVGSVLDVTELKNAQHELEKLAYYDPLTHLPNRRYFKDYLVKQLQLAK 419 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 E+++ + + +DN + ++ G + + + + + + ++ G E LV Sbjct: 420 EEDSIMAVLLVDLDNFKRINDTLGHDAGDILLSVLAGRIKQRLHSQDLVARMGGDEFYLV 479 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + ++ + + + I N +++ + N +T + L+ Sbjct: 480 LRNLSSLAEVEKITKRVRSVLASPIRIKNHFVEITASIGVASYPENCDTPEELMRNADIA 539 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY-- 519 ++ + + Q ++ L + +R A+ +Y QP + + + Sbjct: 540 LYKAKGDGRNR-VAYFSAELDSQLRDKMRLESKLRQAVSCEAFEIYIQPQYDYKTSKFRW 598 Query: 520 -DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR---- 574 + ++ + G + PDKF+ L + + D VL + + R Sbjct: 599 AEVLIRWEDPEEGFIPPDKFIKLAEETGIINDIDQWVLRATC---KLWAEHGEALRAIGI 655 Query: 575 --FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 S+NL K + + +F+ Y I+P + EITE N E ++ +E+L Sbjct: 656 EGVSMNLSARQFYSKTLFAYVEAVFEEYGINPSCISFEITESMVIENIEGAIETMERLRN 715 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G RI+IDDFGTGY++ LKRL D +KID F+ DI +T D I +I +A+ +L Sbjct: 716 IGSRISIDDFGTGYSSLSYLKRLPIDSLKIDRSFIMDIPGDTNDVAITSAIIAMAEKLNL 775 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 SV+AE +ET++Q L + G ++QGY +P P+ Sbjct: 776 SVIAEGIETKEQCEFLVEQGCFHMQGYYFAKPAPV 810 >UniRef50_A1SWE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SWE1_PSYIN Length = 703 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 113/578 (19%), Positives = 217/578 (37%), Gaps = 39/578 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAG--- 241 IV + KR + ++ + + T + I G Sbjct: 122 IVMFAKDITEITALKNTAEANAKRLGHVLEVSGEGMWDWNIQTNEVFQNQKWADITGVKH 181 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 L +Y +L + + F + + VL Sbjct: 182 SKRSFSEFQDCLVEEDKKYVLTSLQALIEKKIPYDIEYRFRRPDGKVIWIWDRGQVLEYD 241 Query: 302 SVC----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGK--- 350 L+ +++ ++ L A D LT+LPN L E Sbjct: 242 DQGKPKLLVGIMQDITEKKFNQSEIELMAFYDTLTMLPNRALLNDRLNLAIEHSKRFEKY 301 Query: 351 -SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +DN + ++ YG + + + + ++++++ + + G E ++VL+ + Sbjct: 302 GAVLFLDLDNFKILNDSYGHQAGDDLLVIVAQRIQSVIRKDDTVARFGGDEFVIVLNELD 361 Query: 410 TEG-----RLQHMVNIL---NSRQIHW------NNTGLDMGYGAAWGRFDGNQETLQPLL 455 +E + Q + + ++I+ + + F G + LL Sbjct: 362 SEPVKAAIKAQRLAQSICHSIKQKINIKISNMAADIDYFITASVGITIFYGQSKVPSELL 421 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE 515 Q+ + + + ++ + L +R +L Q D +LY QP + + Sbjct: 422 QLADLALYQAKKNGRDDS-AMFDPVMQEKLDYSTCLDKELRQSLKQKDFVLYYQPQYDAK 480 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKK 571 + ++ + G++ P F+ + + NL VL + L + Sbjct: 481 QNLVSAEALIRWNHPELGLVNPGDFIKVAEESNLILPIGDWVLSEACQQLKKWQSDPQYQ 540 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 SVN+ + QK+ I R+ I+ + LEITE + + + L Sbjct: 541 HLSLSVNISAKQIWQKDFVAGIKRIVSDSDINVSKLKLEITESILLRDINGTAEKLNDLV 600 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 FG ++DDFGTGY++ LK L D +KID F++D+ N +D ++V+SI DL K Sbjct: 601 AFGLTFSLDDFGTGYSSLGYLKNLPIDELKIDQSFIRDLFDNKMDLIMVKSIIDLGKNFG 660 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++VVAE VET+ +L + G + QGY RP P+++ Sbjct: 661 INVVAEGVETEAHFEILKEFGCKIYQGYYFSRPVPVSE 698 >UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacillus RepID=B9IRT3_BACCQ Length = 909 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 121/732 (16%), Positives = 247/732 (33%), Gaps = 42/732 (5%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNF 79 L LI ++ PL+++ L L + + I+ + Sbjct: 179 LLFFLIGINLLFKPLSLLPKKVGALLGSALILYATTDAIY------------AYIKYFTP 226 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 S + +V AC + + + + L L + Sbjct: 227 EYSMFTITPLYQVTLVLVAIACIL--HTKEPERQEQVLLTPKFGEAIRLSLPYISVVMLI 284 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT-AVLIYNMLFYYLTRMIVSPHFAQI 198 ++++ + P+ + + L+ +L+ M F + Sbjct: 285 VFILVEYVFAPIIVIGLMITFSFVLIRHSLVRKQNKILLLAQMQFNSELEKQIELRT--E 342 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFF--IIF 251 ++ +L + L L + + GY + Sbjct: 343 DLVEQKNELYHNQQMFKSLYEHHPDPIFTLDLYGNFLKVNNAGTTLLGYQTNELLNQPYY 402 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMV 309 +L + +N V ++ Y L + + M+ Sbjct: 403 SLTYEEDLEEIVNAFHRVKKGKSISLEIRAYHKNRDIYYLHVTAVPIFLKDHISGVYLMI 462 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLE 361 + S+ + + A D LT L N RA Q EQ + L +D + Sbjct: 463 KDITESKQQQEQINFLAYHDTLTELANRRAFHQYVEQAIARSKISKMPFAVMFLDLDRFK 522 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + ++ + L + N KL +L G E +++ + ++ + + + Sbjct: 523 VINDTLGHRVGDLLLIAVAKRLESIATPNMKLARLAGDEFTILIENYKKRPDVKKIADTI 582 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + N L + + E +L ++ + Sbjct: 583 VAAMNEPFEIENQHLQISPSIGIAIYPEAGEDPLSILQHADMAMYEAKNKGKNGS-SLYT 641 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 + + + ++ + + AL + L QP + K+ G + +L G + P Sbjct: 642 KELYKKMERKARIEKDLPLALVNEEFYLVYQPQIDITTKKIIGAEALLRWKHPLLGDIPP 701 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRII 594 +F+P++ + VL + L + SVNL Q N+ I+ Sbjct: 702 CEFIPIVEETPQVIPLGHWVLNESCRQLKIWHTFGYKDLKISVNLSAKEFQQNNLIENIL 761 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++ + P+ V LE+TE A + + ++ ++QL ++G + +IDDFGTGY++ L Sbjct: 762 QIITDVKVDPKDVTLELTERIAMIDEKETLSKLKQLKEYGIQTSIDDFGTGYSSLAYLSI 821 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +K+ F + + IV +I LA +LSVVAE +ET++Q L K + Sbjct: 822 FPIDTLKVPREFTQLADHRPEERAIVSTILSLANTLNLSVVAEGIETEKQLKFLQKNNCK 881 Query: 715 YLQGYLIGRPQP 726 Y+QGY +P Sbjct: 882 YMQGYYFSKPLT 893 >UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GHW2_ANOFW Length = 765 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 127/729 (17%), Positives = 257/729 (35%), Gaps = 31/729 (4%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 +S F S I+ + I L + V + + W + + + F Sbjct: 27 VSSFFSLGGILF-AIILLWKASIRVKTNERTFWKWMTASTICYFIAEMIYRIYEWMFQTE 85 Query: 87 AVM-----LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY 141 + + A+L + R + + + ++ I Sbjct: 86 LFFPNLADVFYLLYSFAYIIALLYVIMQQRKVVVVWQSLLDATIVMCVILAYSWIYIVGP 145 Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 ++ + + LL LF A + + + + + + + + Sbjct: 146 MIRLEESILYISVLVAYPLLDLVMLFLLLHLFFATNVRRIWLWNMVGVGLFVFTDTVYFI 205 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF-------TLG 254 + + L L+ L + L + P I L Sbjct: 206 QMMQFHYESNSWLDPLWILSLLMIGLSGYYAKDGHLTFQKSEQPSVIKIMFPYVCFLLLL 265 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 YP + + ++ L L L + Sbjct: 266 FVPFIYPDDRIVITCLVFAVGCIFLRQWMMLKENRQLLQQLQTLNDNLERKVAQRT--SE 323 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRAL----EQAP----EQEAGKSFCCLRIDNLEFMSRH 366 LN + A D LT L N RA E+ +Q+ + + +D + ++ + Sbjct: 324 LVHLNEQLTYVANHDFLTGLFNRRAFVMKLEEELIRAKQQQHHFAVIFIDVDRFKQINDY 383 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--- 423 +G + I I R L ++ + + + G E ++ + + L+ V+ L S Sbjct: 384 FGHQIGDELIVQIGRLLKETIRPTDFIARQGGDEFTIIFTPFKHVDELRRFVHRLVSFSQ 443 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + + + + + + ET++ L+ ++ + Sbjct: 444 QPVAVQHLDIRISLSVGVAVYPYDGETVETLMKHADIAMYRAKEQGKNQ-YQFFNGEMDR 502 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 ++ ++ + A+D L+ QP + E G + ++ + + G ++P F+P Sbjct: 503 VVLQKTMIETALHEAIDNKQFTLFYQPQFDVQTGELMGVEALIRWVHPELGTISPAMFIP 562 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + V+E + + T + R SVN+ P L++N I + ++ Sbjct: 563 IAEETGQIIAIGKWVIEEACRQIQTWNEQHGRSLRMSVNISPKQFLKENFVEHIRAVLQQ 622 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P + LEITE A N + ++ ++QL + G I+IDDFGTGY++ L++ + Sbjct: 623 TQLPPDQLDLEITEGVAVFNEQYTIQKLQQLKQLGVHISIDDFGTGYSSLSYLRKFPINR 682 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KI F+ I D +V++I LAK L V+AE VET QQ +L L +QGY Sbjct: 683 LKIAKPFIDGITEEKEDVAVVKAIIVLAKNLKLRVIAEGVETLQQLNILRSLQCDEIQGY 742 Query: 720 LIGRPQPLA 728 ++G+P P Sbjct: 743 VLGKPVPAD 751 >UniRef50_Q39XT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39XT2_GEOMG Length = 820 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 117/695 (16%), Positives = 220/695 (31%), Gaps = 29/695 (4%) Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 G R + + + A + Sbjct: 122 AGRRLLETSRVHLRLVLSEAPEAELRSIRERSRGEEGAFFAAVSQAFAHKSEELDAAKAE 181 Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI----FTVVDLLSLFT 174 R + + + + G D + ++D T Sbjct: 182 VRQAIRTAQFTIAVASLVALVLAIGGGSLVAASISRPIALLRDGVEQVGQGLLDTRVEVT 241 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG-KEKRAFTLSWLAALSVLLLLLCTP 233 A L RM F + + A L L+ ++ Sbjct: 242 ARNEIGTLAVAFNRMTGELQFTKNEIVTARNFLDNVIQSMADALVILSTDW---TIISVN 298 Query: 234 YENDFIAGYLV-PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 I GY + F V L + +L ++ Sbjct: 299 PALCTILGYGENELLGSPFGRIVAGGAEERELLREMAERGQVPERELIYLARDGAAIPVS 358 Query: 293 FILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG 349 AV+ V ++ + + A DPLT LPN + Q Sbjct: 359 VSGAVMRSPTGEVVGIVCIAHDISERKRSEEEIRRLAFYDPLTRLPNRSLFQDKLAQAIR 418 Query: 350 --------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + L +D + ++ G + ++ L ++ E L +L G E Sbjct: 419 RSRTDGDMIALLFLDLDRFKDINDTLGHAYGDQLLLAVAARLGDNLRPTEFLARLGGDEF 478 Query: 402 LLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 + +++G + + + + + ++ L + G+ + LL Sbjct: 479 VFLVTGLRDKRSVGSLAHSILELLNTPFEIDDKELFISTSIGIALSPGDGDDGDTLLTHA 538 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 + A E ++ + ++ L ++ A + L QP + Sbjct: 539 DMALYAAKEQGRN-AFSFFSEELNREARERRHLEGSLHRAFANDEFFLEYQPQIELRSGR 597 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPR 574 ++ ++ + G++ P++F+P+ + L R VL + R Sbjct: 598 IFSFEALVRWQHPEDGLIYPNRFIPVAEETGLIRRLGEWVLRTACLQCRQWQQPGLPPVR 657 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ Q + R+ + + P+ + LE+TE + A+ S+ + L G Sbjct: 658 VAVNVSGHQFNQPGFIDMVDRVLEETELDPELLELELTESSLMAGAQESIMTLIDLKVRG 717 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +AIDDFGTGY++ LK D +KID FV+DIV + D IV +I +A + L V Sbjct: 718 IHLAIDDFGTGYSSLSYLKHFPLDRLKIDRSFVRDIVKDLDDRAIVEAIIAMAHSLGLRV 777 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRP-QPLA 728 +AE VE + + LL + G +QG+ P P A Sbjct: 778 LAEGVEHEDELELLKERGCDEVQGFYFAHPLLPAA 812 >UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MBY4_DIAST Length = 790 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 116/683 (16%), Positives = 220/683 (32%), Gaps = 29/683 (4%) Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL-FWLGLVTP 133 + Q + + ++ R G+ ++ F + Sbjct: 96 SRRTLARRVEQVLRHAPAGMARLSMDGRLVWANERLREWLGVAPHEPLPQVDFRTLVRPH 155 Query: 134 IGIKCSMYLVGSFFDFPLKISTFF----GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 L + V+ +S A+ + + Sbjct: 156 DSDWAQRQLQRLRAGEIDHYQGERWCRNQRDGSQLPVLCTVSHVLALESEPDHLVCVLQS 215 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-LLLLCTPYENDFIAGYLVPVFF 248 + H A+ ++ +L + GY Sbjct: 216 LREVHAARDAQALSEQRWRLAATVVDNTIEGVVVTDADGRILSVNPAVTRLMGYTEEELL 275 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 + + + + + L+ + Sbjct: 276 GQNPRVFKSGRHGPAFYEAMWDTMRQTGHWQGEIWNRRKNGEVFPERMSLSAVRGADGAV 335 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + M + ++R A DPLT LPN + + + Sbjct: 336 THYVCMFTDISEEKAQHQRLEFLAHCDPLTGLPNRAWFGEQLDSAVRQAQDSGEQMALLL 395 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ YG + +R I R + ++ + L +L G E+ ++ Sbjct: 396 LNLDRFKDVNDSYGHAVGDEVLRHITRQVEQSLRPGDLLGRLAGDEIAVLARHLRHADGA 455 Query: 415 QHMVNILNSRQ----IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + L + + + +G F + T + LL + A Sbjct: 456 AAVARHLIAAASTPWCTPDGIQVVVGVSVGICMFPAHARTTEALLQGAHSSVYGAKARGR 515 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 A +E + +++ + +R AL QG L LY QP G + ++ L Sbjct: 516 G-AYCFFDESLIQAARERLEIEARLRVALAQGHLRLYYQPQVCIVTGRIMGAEALVRWLD 574 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQ 586 G+++P +F+P+ + V+ + + D R ++NL P Sbjct: 575 PQEGMISPARFIPVAETSGVIGPLGQWVMRAACEQGQRWRADGLPEIRLAINLSPRQFQL 634 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++A K + + LE+TE + +++L + G R+A+DDFGTGY Sbjct: 635 TDVAACAAEALKASGFPARCLELELTESVLAERPDEIRAVLQRLQQLGVRMAVDDFGTGY 694 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKR D++KID F++DI + D I +I + + LSV+AE VET QQ A Sbjct: 695 SSLAHLKRFPIDVLKIDQGFIRDIPRSADDMAISAAIVAMGHSLGLSVLAEGVETPQQLA 754 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L + G QGYL RP P + Sbjct: 755 FLRERGCDAYQGYLCSRPLPAEE 777 >UniRef50_A8URG3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URG3_9AQUI Length = 570 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 90/534 (16%), Positives = 185/534 (34%), Gaps = 25/534 (4%) Query: 217 LSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWA 268 + + VL+ ++ I G + + + F + Sbjct: 24 ILKHVSEGVLIVDKEGIIRGANEAFFKITGLGREGVYGKSLSELDFKWEGYPSFNEVRDI 83 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + + + + ++ L + + + + L A Sbjct: 84 LLSEGVWRGEVWGVSRGGSPFTAETTL--VKADEENYIAIFLDSTDKRSLEASLRSLAYY 141 Query: 329 DPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN L Q + IDN + ++ G + +++ Sbjct: 142 DALTGLPNRALLYDHLSQFLFQAKNENKKLAVVFFDIDNFKLINDTLGHEVGDSLLKAFA 201 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 L N + + E ++VL ++ +V+ + + + Sbjct: 202 HRLTSHFPPNTMVARFGSDEFVVVLESIAGIDDVEEVVSGFINSVTTPFFIEGQKIYVTV 261 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 A + + Q LL + + ++ + +++ L +R Sbjct: 262 TAGISLYPIDGGDPQTLLRNADIAMHHAKELGK-SSFKFFTNELNLKVSERFTLQAELRD 320 Query: 498 ALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ + +LY QP G + ++ D G++ P +F+ + + +L Sbjct: 321 ALEREEFVLYYQPQFELRTNTIVGVEALIRWHHPDRGVILPGRFMHVAEETDLIVPLGYW 380 Query: 555 VLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 VL + + + +VN+ + +++ ++ + P + +EITE Sbjct: 381 VLRRACEDGRRLVENGFPLKVAVNISAKQISEEDFLEKLRDILNATGFDPNLLEVEITES 440 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 N + + + +L K G IAIDDFGT Y++ LK D +KID F+ D++++ Sbjct: 441 VLMKNKQQAARVLRELKKMGISIAIDDFGTSYSSLNYLKYFPVDKLKIDRSFIGDVISDP 500 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D I +I +A L AE VET++Q L QG+ P L Sbjct: 501 NDVAIATTIIAIAHNLGLKATAEGVETEEQLIFLKLWQCDEAQGFYFSPPITLD 554 >UniRef50_B9ZLS8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLS8_9GAMM Length = 1301 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 112/576 (19%), Positives = 207/576 (35%), Gaps = 37/576 (6%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFI 239 ++ R++ + A + RR + R + +L+ L I Sbjct: 717 HMARIVAANLGAALERRRALTGLR----RLAAVFQSTRDGILITDLSARIVAVNPAFTEI 772 Query: 240 AGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 +G+ F + + + + + L Sbjct: 773 SGFSEHDALGRNPRFLKSGRHDAEFYREMWATLGATGHWQGEVWNRRYTGETHPQWLSLD 832 Query: 297 VLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPE 345 V+ ++ + A D LT LPN RALE+A Sbjct: 833 VVRDEGGEPQYYAGVLTDLSALKRSQNELEYLAQHDSLTDLPNRSQLQTLLGRALERARA 892 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + G + CL +D + ++ G + + + R L +++ + L +L G E L VL Sbjct: 893 ERRGLAVLCLDLDRFKTLNDSLGHSVGDRVLLEVARRLADVLESPDLLGRLGGDEFLAVL 952 Query: 406 SGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 +T + L R + + + RF + +T+ L+ Sbjct: 953 ESADTHELAEERARALLEVLQRPFVLDDGQVVYVNASIGVSRFPADGDTVVDLIQHADAA 1012 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL--DQGDLLLYAQPI---RNKEG 516 + A E ++ +++ L N +R AL + +L ++ QP + Sbjct: 1013 MYHAKALGR-ETWSFYTEDLTQAAAERLDLENRLRHALNQENDELAVHFQPQVRLVDGRF 1071 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRF 575 G + ++ G + PD+F+P+ + L VL + Sbjct: 1072 TGVEALVRWRTGSGESIRPDRFIPIAEETGLVVPLGEWVLREACRQGRELLDQVSPDLVM 1131 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 SVNL P+ L + N+ ++ + + + EITE + ++ ++ L G Sbjct: 1132 SVNLSPVQLRRGNLVEQVRAILGETGFPARQLEFEITETGLMQQGDQAVTRLKALKSLGV 1191 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD---IVTNTLDAMIVRSITDLAKAKSL 692 R+AIDDFGTGY++ L+ D++KID FV + D +I +I +A+ L Sbjct: 1192 RVAIDDFGTGYSSLAVLQTFPLDVLKIDRSFVDGVDRMDEEGTDRLIASTIIAMARNLQL 1251 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VE + Q L + G ++ QGYL P Sbjct: 1252 EVIAEGVENEAQARFLIEHGCEFGQGYLYSPALPPE 1287 Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 26/314 (8%), Positives = 56/314 (17%), Gaps = 50/314 (15%) Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 L + + +V L + G Sbjct: 166 TAEAALEVLPSSPEEPLALDLLLVDYRLPAMDGLELARIVRHERGLDLPVVLLTGQGTEE 225 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 L ++ + + ++ RR+ A E+R + A Sbjct: 226 LAARALRMGVDDYVLKSEGYLKGLPAVLDQVHVHARLRRERAALAASERRYREVIDQA-- 283 Query: 224 SVLLLLLC-------TPYENDFIAGYLVP--VFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + L I G+++ + + V + R L V Sbjct: 284 GNVFFHLDQQGRWVFANPAWSEITGFVLEQTLGRPLVDFVVAEDRGRVGELVREVLETGE 343 Query: 275 LN--YNQNFLQGVETEYSLAFILAVLISFSVC--LLYMVRIYHRSEWLN--RRWH----- 323 L S + + Sbjct: 344 TRGIGEVRLQSREGGIRWCELRLRARQSERDQRPFTGTLIDVTERVRNQRIQEIRANILD 403 Query: 324 LQAL--TDPLTLLPNFRALEQ------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A DP LE + + + D Sbjct: 404 RIATGERDP-------ALLEDLVLGLESLNPDLHGCVMLVDAD-------------GDQL 443 Query: 376 IRSICRTLLPLMQE 389 + + + ++ Sbjct: 444 VGAAGPRIPEALRS 457 >UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8I8_9ALTE Length = 1020 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 119/571 (20%), Positives = 209/571 (36%), Gaps = 36/571 (6%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 F L R I + R T +L I GY Sbjct: 454 FLTLVRDITEDKVLEAELRIASTAFETHLGIIITDENSI-------ILRANKAFSRITGY 506 Query: 243 LVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + + L V L+ Y+ + + Sbjct: 507 AEHDVLGKTPNVLQSGLQDATFYHYLWARVRESGSWEGEIWNLRKDGEAYAEWLTITAIC 566 Query: 300 SFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 S + + + R H A D LT L N LE+ Q Sbjct: 567 GKSGVVQNYVGTFHDITKRKKAEREAHRLAFYDSLTGLANKALLEERLSEVCKANTRQNT 626 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + ++ L ++ G +++I L +++E++ L ++ G E ++LS Sbjct: 627 HAALLYVDVEQLRSVNDARGYEFGDLVLKAIAEQLGTMVRESDTLARIGGDEFAILLSNL 686 Query: 409 ETEGRLQH-----MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + + + + R I + + DG + L + Sbjct: 687 NPSQDVAARVTEGVADKVLDAFTRPIEVLQQKIQVNISIGITLIDGRSSPVDQQLQRAEQ 746 Query: 461 LAEQSCAHHHVLA---LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKE 515 +Q+ + + + + Q + VL+ +R AL + L+LY QP + Sbjct: 747 ATQQAKEQAKLRGEKRISFFDPEIQAQVVQHVLMEEELRNALAEEQLVLYYQPQIRNPNQ 806 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGP 573 GY+ +L GI++P F+P+ Q L ++E + LA + Sbjct: 807 LLGYEVLLRWRHPKRGIVSPAVFIPIAEQSRLILPIGRWIIEQACEKLAAWQSEPTTSEL 866 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ + N ++ ++ ++ P+ + LE+TE ++ E + +L Sbjct: 867 SLAVNVSIIQFQSNNFVEQVGQILEKTGAPPRLLKLEVTESLLMNDPERITEMMNRLRSM 926 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R ++DDFGTGY++ L +L D IKID F+ ++ N + IV SI LAK +L Sbjct: 927 GVRFSLDDFGTGYSSMSYLNQLPLDQIKIDQSFINEVANNLASSAIVESIIGLAKGLNLE 986 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 V+AE VET++Q+ L G Q QGYL GRP Sbjct: 987 VIAEGVETEEQRNWLANHGCQNFQGYLFGRP 1017 Score = 51.9 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 20/279 (7%), Positives = 55/279 (19%), Gaps = 21/279 (7%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL-TSRYVW 122 V+ + ++ +++ V A + + R + + + Sbjct: 196 VLSGSLAGLSLSAGQSIAILDESMMLVARLPVVAGAAVSPGQILTDALARRFIDSGSDSY 255 Query: 123 QRLFWLGLVTPIGIKCSMY---LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 Q + + + + + + ++ V + +I Sbjct: 256 QVIIEGPIPNDGEARFYAFKRVPGAPYIVVVGEKTSVALQDWHQSLWVGATGILLVAIIG 315 Query: 180 NMLFYYLTRMIV---SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 R + + + + E R L S + + Sbjct: 316 LFFLKQFCRRLSVENALLHENRERKLLQQNAQANESRLQALVNSIPDSTFVFDEHGRFTF 375 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV---------STLCLLNYNQNFLQGVET 287 + + L A + + N Sbjct: 376 AHAQNKGQ-LLRPVEKLLGLHYSEVLPPELAARFDGIKTDVEKSQKMQNIEYQLFI-DGE 433 Query: 288 EYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + L L +VR + L Sbjct: 434 ARDYEARVNALTDLEGQHSGFLTLVRDITEDKVLEAELR 472 >UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8B4_NITMU Length = 1109 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 100/573 (17%), Positives = 198/573 (34%), Gaps = 24/573 (4%) Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCTPYEND 237 F + R I + L L A + + + Sbjct: 523 TVHYFVAMIRDITEQERRKTEILAARRQLQATLDAIPDLLFELDADG-CVHAWHSVRRTE 581 Query: 238 FIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL---QGVETEYSLA 292 F + + L G + L A + + + L+ Sbjct: 582 FPTVSGESLVGKKVADFLPTGAVDIILSALAEAQEKGLSSGKQLELRLPGREDKWWFELS 641 Query: 293 FILAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------ 345 + S + + + R + +R A D LT LPN L Sbjct: 642 VSRKHVDSAAGLRFIVLARDITERKASEQRILHLAHYDSLTGLPNRALLADRMRVAINRA 701 Query: 346 --QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 Q + + +D + ++ G + H ++ + + ++ + + ++ G E ++ Sbjct: 702 ARQAKRLAVLFVDLDRFKAINDSLGHDVGDHLLKVVAERMQTSIRSVDTVSRVGGDEFVV 761 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L+ ET + + S+ L + + N + LL Sbjct: 762 LLNEIETAEDAARVAQKIIDGLSQPYQIEKHELLLTGSIGICIYPDNGKEPNILLRNADA 821 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGE 517 + H E ++ + +++ L + +R A+++G++ L QP Sbjct: 822 SMYTAKEAGHNR-YQFYSEDMTARAIERLSLEHDLRGAVERGEMFLVYQPQIELGTSRVI 880 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 G + ++ G+++P +F+P+ L L + S Sbjct: 881 GVEVLMRWRHPARGLISPVRFIPVAEDTGLILSIGEWGLRESCRQAQLWYERGLLNACIS 940 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + Q + G I + ++P + LE+TE AE ++ + +L G + Sbjct: 941 VNVSAVQFRQTDFVGIIENALQESGLAPTNLELELTESAVMQGAEPALNKLRELDALGVK 1000 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ L++ D +KID FV+D+ N I +I + ++A Sbjct: 1001 VAIDDFGTGYSSLAYLRQFTVDRLKIDQSFVRDVPGNNDAEAIAAAIVAMGLNLGFRIIA 1060 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+ Q L + + QGYL P + Sbjct: 1061 EGVETEAQAEFLQSVLCKEGQGYLFAWPMTAIE 1093 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 22/212 (10%), Positives = 46/212 (21%), Gaps = 20/212 (9%) Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + L G+ + KI A V + ++ + + L Sbjct: 349 LAAYRPLTGTGWRLLAKIDQNEVLAQLWTLVFWMSAVILIAVTAVSVVLLLLWRQQQRAH 408 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--LLCTPYENDFIAGYLVPVFFIIFTL 253 L + A++ L + + GY Sbjct: 409 QLALIIHTADQDRLLKYFYDLPFIGMAITSPDTKRWLRFNNQFCEMMGYSTEEL---AKK 465 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQ-------NFLQGVETEYSLAFILAVLISFSV--- 303 ++ +P +L F++ + + + Sbjct: 466 SWIEITHPDDVAKSTAERERILKGESEGYAMNKRFIRKDGSIIFANVDVKCVRRDDGTVH 525 Query: 304 CLLYMVRIYHRSEWLNRRW-----HLQALTDP 330 + M+R E LQA D Sbjct: 526 YFVAMIRDITEQERRKTEILAARRQLQATLDA 557 >UniRef50_A0YZ09 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YZ09_9CYAN Length = 776 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 92/579 (15%), Positives = 188/579 (32%), Gaps = 42/579 (7%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----------LLLCTPYENDFI 239 + +R E + LS L + I Sbjct: 160 HALQQEIAERQRIEESLRESESKFRQLSEHIQEVFWLMGYDATSKQFTAIEYVSPAFATI 219 Query: 240 AGYLVPVFFIIFTLG----VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 G + + L + + T + Sbjct: 220 WGKTCESLYENPWEWLSSIHSDDHERVEKAFTEKAILGSFDEEYRVVHPDGTVRWIRDRG 279 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------- 345 + + + + + L D LT L N Q E Sbjct: 280 FPVTDDKGEVYRVAGIAEDITNLKRAEAHLVRETLHDSLTGLANRTYFMQRLEMAIKKRN 339 Query: 346 --QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + +D+ + ++ G ++ + I R L +++ + + +L G E + Sbjct: 340 RHNNYRFAVLFIDLDDFKRINDTLGHLIGDQLLMQISRILTGSVRDIDSVARLGGDEFTI 399 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 ++ + + ++ + + + + + N + ++ Sbjct: 400 LVEDVQDWQDVLNITQRIQEQLTSAVQLEHHEIFTSTSIGIVFSTPNYQNGTEVVRDADI 459 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE----- 515 ++ A + + + Q V L N +R A+ +L LY QPI + Sbjct: 460 AMYRAKADGKG-CYEVFDRSMYDQVLHLVELENALRQAIANQELHLYYQPIVSLRDNSQD 518 Query: 516 ---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 EG++ + G+++ +F+ + VL+ Sbjct: 519 HLIIEGFEVLSRWHHPKKGLISASEFISIAEDTGQINEIGEWVLQQACIQFQQLRSHYPD 578 Query: 573 ---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 FS+N+ L + ++ + + I P + LE+TE N + +++ Sbjct: 579 VTNLYFSINISGRQLRESSLLNLLDHTLQTTQIPPHCLKLELTESSLIENTTIAAKILKE 638 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 + + G I++DDFGTG+++ L + ++IKID FV+ + T + I+ SI LA+A Sbjct: 639 IQQRGIEISLDDFGTGFSSLRYLHQFPLNVIKIDRSFVETLDLGTRERCIIHSIVTLARA 698 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VAE +ET+QQ L L QGY +P P Sbjct: 699 LGFATVAEGIETRQQLEKLRSLECDSGQGYFFSKPIPGE 737 >UniRef50_Q1NS23 PAS:GGDEF:EAL:Response regulator receiver n=4 Tax=Deltaproteobacteria RepID=Q1NS23_9DELT Length = 989 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 116/610 (19%), Positives = 216/610 (35%), Gaps = 32/610 (5%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTA-VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 GD + V + L L LI + Y + + + Sbjct: 222 APPVVLIGDLGSEREVAEALRLEVGDYLIRRPGYLYGLPATLEQVAQLRQLQDEQRALRA 281 Query: 210 KEKRAF---TLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFF---IIFTLGVGKL 258 E+R + V++ L I GY Sbjct: 282 SEERHRLQVAALNASRDGVVITDLEPKIISVNPAFTTITGYHEKEVRGKSPSLLKSGHHD 341 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRS 315 R + ++ + + Y ++ + + + + Sbjct: 342 RAFYQSMWAQLKQQGFWQGEVWNRRKDGEVYPELLSISTVYDEAGEPSHYVGVKTDLTNL 401 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHY 367 R A D LT LPN LE +A +++ + L D ++ Sbjct: 402 RRSEERLQHLAHHDHLTGLPNRLLLEALLEHALERAQREQSRLAVLVLNCDRFRTINESV 461 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G + ++ + L +++ + L +L G E LVL G ++ + L + Sbjct: 462 GYAAGDELLVAVVKRLQSILRAEDTLARLAGDEFALVLEGLGDYREVEFTLQRLWQALEQ 521 Query: 425 QIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + + + + +T+ LL + Q+ ++ Sbjct: 522 PFALPDGYEVYIQASVGISFYPQDDDTVAGLLVRADGAVNQAKDGGGNRCY-YATSTLNE 580 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 ++ + + L +R AL Q + LLY QP G + ++ + G++ P +F+P Sbjct: 581 ESRRGLELEAALRRALQQREFLLYYQPKVALAGGRITGAEALIRWQRPGHGLVAPGEFIP 640 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + L V++ + L + R +VN+ + + + Sbjct: 641 AAERSGLIVAMGAWVIDEGCRQLRRWREEGLGDLRLAVNVSASQFRAPGLVTALKQALAE 700 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + ++ + LE+TE S E+++ +E+L G +A+DDFGTGY+++ L R D Sbjct: 701 HRVAAGQLTLELTESMLMSEPEAAIARMEELKTLGVELALDDFGTGYSSFANLSRFPIDQ 760 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+ IV++ A I SI +A L VVAE VE Q Q L + G +QG+ Sbjct: 761 LKIDRSFVEGIVSSPDAATIAASIIAMAHQMRLKVVAEGVENQPQANYLRRNGCDEIQGF 820 Query: 720 LIGRPQPLAD 729 L +P P AD Sbjct: 821 LFSKPLPAAD 830 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 118/599 (19%), Positives = 219/599 (36%), Gaps = 24/599 (4%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 + V L+S+ A L NM +M + R E Sbjct: 17 AHILAVGLALLIATVTLISMEYASLRRNMTVTMQIQMRIMAGNIAQALVRGEHEV-ASEV 75 Query: 213 RAFTLSWLAALSVLLLLLCTPYENDFIA-GYLVPVFFIIFTLGVGKLRYPFLNLTWAVST 271 A + +L + +++ G L +F ++ V + + W Sbjct: 76 LASLAEAPEIDTAVLYDMQQNRFAEYVRPGSLSRLFDMMVADQVQRHSDMHKSEIWQPVV 135 Query: 272 LCLLNYNQNFLQGVETEYS---LAFILAVLISFSVCLLYMVRIYHRSEWL----NRRWHL 324 + +++ L ++ ++ V L + R + R Sbjct: 136 YGGMQVGMLYMRSNMKGLYRQLLWYVGTTVMVMLVTLFAAALLLSRLQRAMLKAEERAGF 195 Query: 325 QALTDPLTLLPNFRALEQA----PEQEAG----KSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D +T LPN A + E + +D+ + ++ G + + Sbjct: 196 LANYDTVTDLPNRHAFSRHFHLLLEGARHRRGVLALLVFDLDDFKVINDTLGHDVGDKLL 255 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGL 433 + + L+ + +Y++ G E ++L P ++ + N + I N+ Sbjct: 256 HLVAQRLMVAAGKKNTVYRVGGDEFAMMLDQPADVENVEAVANRFIRALAPPIVLNDRNF 315 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 +G + + E LL + + + +++ ++LL Sbjct: 316 YIGVSIGASIYPYDGEDAAHLLRDADAAMYYAKSRGKN-NFQMFSAEMHHKSSTRLLLET 374 Query: 494 TIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R AL++ LY QP + + G + ++ G++ P F+P+ + L R Sbjct: 375 ELRVALEEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCPSSFIPVAEETGLIVR 434 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + R SVNL Q+N+ + ++ +R + + LE Sbjct: 435 IGEWVLREACRQAMEWKALGVPLRMSVNLSGRQFRQENLVQTMTKIIERTGMDSSLLELE 494 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE +AE++ + L G +AIDDFGTGY++ LKR +KID F++DI Sbjct: 495 ITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYLKRFPVSRLKIDRSFIRDI 554 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D I + +A + L VVAE VET+ Q L + G +QGYL RP + Sbjct: 555 PNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDMVQGYLFSRPVSARE 613 >UniRef50_C5BN58 Predicted signal transduction protein, with PAS, HAMP, GGDEF and EAL domainsl n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BN58_TERTT Length = 807 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 123/633 (19%), Positives = 233/633 (36%), Gaps = 28/633 (4%) Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 Q + + ++++ F L S+ D T ++ + A + N Sbjct: 161 QAFLRFSITLAFALTIALFV-AYFVGGRLVGSSLVPLRDLFNTSQEVAASPYANIRANKK 219 Query: 183 F-YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYEN 236 + ++ + D A + E R L+ A + + L T Sbjct: 220 SNDEIGDLVDVFNQILDTLETDNAALMESESRFRVLAEHAPIGIFLRNRKLIMEYTNDRW 279 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFIL 295 I G K + ++ + + + +L L Sbjct: 280 CEITGLTPSQANAFTNNIDPKDAALYESVQDKARSQHTPQVIEYTYTTPQGSRRTLMEHL 339 Query: 296 AVLISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------- 345 A L + + + + A DPLT LPN R E Sbjct: 340 APLNNLQGFQGFVGSLLDVTELKTAQMELEKLAFYDPLTDLPNRRFFRGHLELTIAAAKK 399 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D+ + ++ +G + I + L + + ++ G E +L++ Sbjct: 400 YDKRLAVMMTDLDDFKKINDTFGHDAGDQLLMQIGKRLKAASASIDVVSRMGGDEFMLLV 459 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 ++ +L H N + ++ N +++G F + T + L+ Sbjct: 460 KNIDSSSQLDHKANNILRALREKMEINGQQVEVGGSIGIAVFPNDAITYEELIRYADIAL 519 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 + + + + + ++ L +R ALD+ L +Y QPI + E Sbjct: 520 YNAKSMGGN-TVSYYSSDLDKRIKDKMRLEQKLRVALDKRLLEVYIQPIYDAATREMIKG 578 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFS 576 + ++ + + G ++P+ F+ L + L VLE + +L H + Sbjct: 579 EALVRWMDPEEGFISPEVFVSLAEESGLIYDLGSLVLEKVCAYLHEHEGKLHLLGMRTIA 638 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL + I FK+Y I P+ + E+TE + + ++ + + G Sbjct: 639 VNLSARQFFASQLVTYIEATFKQYQIDPKQIEFELTESMVMDDVDQAIDIMRAIRNLGCS 698 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTGY++ LK+ + +KID F+KDI + D I +I +A L+VVA Sbjct: 699 LSIDDFGTGYSSLSYLKQFPINTLKIDRSFIKDIPEDKNDVEIAYTIIAMAHNLGLTVVA 758 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q LL YLQGY RP P++D Sbjct: 759 EGVETKEQWQLLRDKNCDYLQGYYFARPMPMSD 791 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 119/566 (21%), Positives = 197/566 (34%), Gaps = 28/566 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLV 244 +++ L +R L +E+ +L+ + S++ + + Sbjct: 236 VLALVRDTRLLKRTDTALLRREREFRSLAENSPDSIMRYDRDCRIVYLNPSLENTLLFSA 295 Query: 245 PVFFIIFTLGVGKLRYPFL----NLTWAVSTLCLLNYNQNFL--QGVETEYSLAFIL-AV 297 + F L V+T + + Sbjct: 296 SDMIGRTPTELHPGDERFETYESKLRAVVATGKADEIELLLQGTHKGPRLLHIRLVAEHD 355 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 +L + R + RR A DPLT LPN L Q + Sbjct: 356 PDGECTGVLAVGRDITEVDEYRRRIQRLAFFDPLTDLPNRALLNDRIRQCLTDAAARGSQ 415 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 L +D + ++ G + R L ++ + + +L G E ++L Sbjct: 416 FGLMLLDLDRFKEVNDTLGHSAGDRLLCEAARRLNACVRGYDTVARLGGDEFSILLPVVR 475 Query: 410 TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 G L+ + + L + Q L Q + Sbjct: 476 DRGDLRAIAGRILEAFGEAFIIEGKELFVSVSIGIVLHMEGQCDADRLFKQADLAMYHAK 535 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 E ++ Q + + + +R AL G+L LY QP G + +L Sbjct: 536 RQGRN-NFQFYAEELAVQVSDRTAMEGALRKALGNGELELYYQPQVALPAGRIVGAEALL 594 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPL 582 GIMTPD+F+P+ + L VL + + + +VNL Sbjct: 595 RWRHPQEGIMTPDRFIPIAEETGLIRDLGHWVLTTACRRAVYWHRTVDSPFKVAVNLSTR 654 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 ++ ++ G + R+ + P+ + LEITE N +E+LH GF I+IDDF Sbjct: 655 QFVRNDLPGELQRIVQDTGCRPEWLELEITESLLLGNDAEVGAALEELHDMGFAISIDDF 714 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY+ L R D IKID F++ + +V++I +A A L V+AE VET Sbjct: 715 GTGYSALSYLNRFPLDQIKIDRSFIQGFPADREKVELVKAIISIAGALQLEVIAEGVETS 774 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q LH G + QG+L GRP P Sbjct: 775 HQAEYLHAQGCRLAQGHLFGRPLPQD 800 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 14/188 (7%), Positives = 38/188 (20%), Gaps = 16/188 (8%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 PL+ ++L ++ + + ++ + A++ Sbjct: 83 MPLRTEFPVEHPVRGPRWLELSAVPEPLSDGAIRWHGFLTDVTERRQAEVQAGLVGKALD 142 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLT 266 + +S A + GY F + + + Sbjct: 143 HLAE---MVSICNAEGRFV---YVNEAWRKALGYRGEEFLNLSVAEVVPDLGSRSWAGHF 196 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIY-------HRSEWL 318 + + + L + +VR Sbjct: 197 REIREKTSAQWETIHRTRDGHRVPVVVDARYLEHEGCGYVLALVRDTRLLKRTDTALLRR 256 Query: 319 NRRWHLQA 326 R + A Sbjct: 257 EREFRSLA 264 >UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=8 Tax=Ralstonia RepID=B2UIB3_RALPJ Length = 916 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 109/736 (14%), Positives = 213/736 (28%), Gaps = 51/736 (6%) Query: 43 FLAWMPLCVMLSILFIFGWRGVVPVLC-GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCA- 100 + + L + + T L + L Q S ++ Sbjct: 160 AVQARAEALHARRLLASENAVLAQLASNATLSTVLRHLCLYVEQVYPNAMSALLLLDAGS 219 Query: 101 -CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 + Y T + + ++++ D + Sbjct: 220 QTLRVAAAPTLPAAYAATLENSPVGPEAGACGCAMYLGDTVFIDSIATDPRWQRERTAAL 279 Query: 160 ADAIFTVVDLLSL--------FTAVLIYNMLF-----YYLTRMIVSPHFAQILWRRDIAP 206 A + L A+ + + I Sbjct: 280 AAGFASAWALPIRSSRGDKLGVLALFYRQPCMPVEEEQHFLDDVTHLAGVAIQKDNVERG 339 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 E+R V+++ + + + +G +L + Sbjct: 340 LAESEERYRLAISNLHEGVVIISPDGVVQAANASAERILRVRPGQLVGRNRLDPIQRVVD 399 Query: 267 WAVSTLCL---------------LNYNQNFLQGVETEYSLAFILAVLISF----SVCLLY 307 + L + + + ++ Sbjct: 400 EYGKEIGSTMMPSGQVLRTGEPIFGRVYGLLLKTGELMWVRQNIIPIRRHAEPTPSSVML 459 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDN 359 + +R A D LT L N E + L +D Sbjct: 460 SFADITDIKRAEQRLRHLAAHDALTGLTNRSFFIAHLESAIESARDESRELALFFLDLDR 519 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G ++S L + + + +L G E ++++ R+ + Sbjct: 520 FKSVNDTAGHACGDTLLQSAAARLTDCIGPGDVIARLGGDEFVILIDQRVEGKRIALLAE 579 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L N +G + + + LL ++ + A Sbjct: 580 RLLQAMREPFDTVNGRYYLGVSIGVALYPHDGISGSDLLRSADAAMYRAKQNGRNRA-QF 638 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIM 533 ++ + ++ +L N +R A + +L L QP + G + +L G + Sbjct: 639 YTAELNARLQRRYMLENALRDARENNELQLVYQPKYDLASHRIVGAEALLRWNSAKLGAI 698 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGR 592 +P +F+P+ + L VL + R +VNL ++ Sbjct: 699 SPVEFIPVAEETGLIVPIGAWVLRRACEQAVIWYEALGYDFRMAVNLSARQFQAGDVVPM 758 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I + + P A+ +EITE A+ + L G RI+IDDFGTGY++ L Sbjct: 759 IEQTLADSGLPPTALEVEITESLLMGGADEVRPMFDALTAQGIRISIDDFGTGYSSLSYL 818 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 +R +KID F+ I + + +I +A+A ++V AE VE Q L K G Sbjct: 819 QRFPISNVKIDRSFITGIPHDPDSVALTEAIVAMARALGMTVTAEGVEDADQVEFLAKAG 878 Query: 713 VQYLQGYLIGRPQPLA 728 Q +QGY IG+P Sbjct: 879 CQEIQGYYIGKPVTAE 894 >UniRef50_Q1NX89 PAS:GGDEF:EAL:Response regulator receiver n=4 Tax=Deltaproteobacteria RepID=Q1NX89_9DELT Length = 730 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 119/690 (17%), Positives = 219/690 (31%), Gaps = 63/690 (9%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 L G + R L + + G LK D Sbjct: 31 LVALLEAHGYQATGLPGGRAALDHLTEQPANLALVDLVMPGMDGITTLQELKRVAPELDV 90 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFY----------YLTRMIVSPHFAQILWRRDIAPSLGK 210 I L T F + + R Sbjct: 91 ILITAYATLEKAVTGFQEGAYDFLIKPCPPETIIAALERVREKKQLRQNIREGEERLQRS 150 Query: 211 EKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGK-------- 257 E ++ +V+++ ++ +G + Sbjct: 151 EGFLHSVLESLGDAVVVIGRDLRIITANRGYRQQSGRGEEEIIGQHCYRISHGYSRPCWL 210 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHR 314 + A+ N + L + + + +R Sbjct: 211 EEDCVCAVIQAIKEGRPANSIHIHRDKEGVPLYVETNAYPLRDQNGHIYAAVETIRDITE 270 Query: 315 SEWLNRR-------WHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDN 359 + L + A D LT LPN R L+ EQ + L +DN Sbjct: 271 IKELEQEKRAKEAEIERLAFYDFLTDLPNRRLLQDRLEQAFAASERSGQYGAVIFLDLDN 330 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----L 414 + ++ G ++ R L ++E++ + +L G E +++LS T+ + Sbjct: 331 FKNVNDTRGHRTGDLILQMTARRLRDTVREDDTVARLGGDEFVILLSNLATQSETAISRV 390 Query: 415 QHMVNIL---NSRQIHW---------NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + +R + +G F G++ + + L Sbjct: 391 GRVAEKIRLALARPFQLTKPQQGSSLESGEFHLGASLGIALFRGHENSAEELFKYADTAM 450 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYD 520 ++ A + + + L +R A+ Q LY QP + G + Sbjct: 451 YRAKEAGRNTA-RFFDPAMQTALEENESLERDLRRAVVQEQFELYYQPQVDAAGRLLGAE 509 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVN 578 +L G ++P F+PL + L VL+ + LAT R ++N Sbjct: 510 ALLRWYHSARGPVSPLSFIPLSEENGLILPIGRWVLQEACRQLATWSQSFPVGDFRLAIN 569 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + Q + + + P+ + LE+TE ++ + ++ + QL G A Sbjct: 570 VSARQFHQPGFVDEVQEIIAAARVEPRQIKLELTETLVLTDLDDTIKKMRQLQAAGLGFA 629 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ +LK+L + +KID FV+D+ T+ DA I +I + + +VAE Sbjct: 630 MDDFGTGYSSLAKLKQLPLEQLKIDRAFVRDLETDPHDAAIAATIIAMGRTLGFEIVAEG 689 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VE+ +Q +L G QGY P P A Sbjct: 690 VESAEQLQILQSQGCGIFQGYYFTPPLPAA 719 >UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZY8_9NEIS Length = 718 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 98/564 (17%), Positives = 187/564 (33%), Gaps = 33/564 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFFI--I 250 R+ + L V Y + G + Sbjct: 146 TDRRQAEHAVEEQLNFTSQLIETIPSPVFYKDEAGRYLGCNEAFEHYIGLPREELIGKSV 205 Query: 251 FTLGVGKLRYPFLNLTWAV-STLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLL 306 F + L + A+ Y T ++ F A L+ Sbjct: 206 FDISPRHLAERYHAADQALFDAPGTQTYEAEVQSTDGTLKNVVFYKATFNKSGGQLGGLV 265 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRID 358 ++ + + QA D LT LPN R + +Q + + +D Sbjct: 266 GVILDITDRKRSEKTIWHQANYDLLTELPNRRLFLERLQQGIEHAKGSGSALALMFIDLD 325 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + + + + ++E + +L G E ++L ++ + Sbjct: 326 RFKEVNDMLGHKVGDQLLSQAGQRIADCVRETGLVARLGGDEFTVILENLSQPTPIEQVA 385 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + S+ + + + + + LL + A Sbjct: 386 QSIIETLSKPFQLGPDVAYVSASIGVTLYPKDAQDMDTLLINADQAMYHAKALGKNR-FC 444 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + +++ L + +R+A+ QG L +Y QPI + + ++ G Sbjct: 445 YFVPSIQAIFAERLQLGHDLRSAMAQGQLDVYYQPIVDLATGHIVKAEALVRWHHPRRGW 504 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPC------DKKGPRFSVNLMPLTLL 585 ++P +F+P+ L V + S+N P Sbjct: 505 ISPAQFIPIAEDIGLINGIGDWVFRRAAGMAKRLWESGCSGTPAGAPLQISINKSPRQFF 564 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + I + + + + +EITE ++Q + G ++++DDFGTG Sbjct: 565 TGHAHETWIDHLQEIGLPAECIAIEITEGLLLDERPDVTSKLQQFRRAGVQVSLDDFGTG 624 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y+ LKRL D +KID FV+D+ + D I +I ++ L VVAE VET++Q+ Sbjct: 625 YSAMAYLKRLDIDYLKIDQSFVRDMTSTPSDRAITEAIIAMSHKLGLRVVAEGVETREQR 684 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 LL G + QGY R P + Sbjct: 685 DLLSAAGCDFGQGYWFSRALPEDE 708 >UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYI1_BACS4 Length = 774 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 88/427 (20%), Positives = 172/427 (40%), Gaps = 18/427 (4%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYG 368 + +A D LT LPN +EQ EQ + + + +D + ++ G Sbjct: 348 QSRKEVEYRANHDILTGLPNRYHIEQLLEQEIVTCDENDQSLALMFMDLDRFKILNDTMG 407 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 + + L + EN + +L G E L++ + ++ ++ + + Sbjct: 408 HQIGDQLLIQTAIRLQQHVCENCTVGRLGGDEFLILSKD-ASIEKVSNIAKKILKDMANP 466 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 N+ + + +T ++ + + + Sbjct: 467 FIINSKEFFTSPSIGISVYPKDGQTKDDIIKHADTAMYVAKENGGN-NYQFYTPEPTNLL 525 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 +K+ ++ N +R AL + LLY QP + + G + ++ G++ P F+P+ Sbjct: 526 SKKYIIENDLRKALKNEEFLLYYQPQVDLKSGDLVGLEALIRWQHPKLGLIPPMDFIPIA 585 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + +++ + + +VN+ P KN I + Sbjct: 586 EETGYINHIGKWLIKEACRQNKQWQQNGSFYIPVAVNVSPWQFRDKNFVENIKAALDETN 645 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + LEITE + ++ + Q+ + G ++AIDDFGTGY++ + +L D +K Sbjct: 646 LDPKYLELEITESM-MHHFIDTIDKVHQVKEMGIKVAIDDFGTGYSSLNAIDQLPIDTLK 704 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F++D++TN A IV++I DL L+ +AE VE ++Q L QGYL Sbjct: 705 IDRSFIRDMITNDSKAAIVKTIIDLGNNLHLNTIAEGVEYEEQATFLANQDCVKAQGYLF 764 Query: 722 GRPQPLA 728 +P P Sbjct: 765 SKPLPPE 771 >UniRef50_B2IZR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IZR7_NOSP7 Length = 664 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 96/620 (15%), Positives = 192/620 (30%), Gaps = 71/620 (11%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS-----VLLLLLCT 232 I F L I A + A + +R L A + ++ + Sbjct: 37 IITEAFEELNTAIEELLTASEELKVTRAEVEKERQRYQDLFEFAPDAYLVTNIVGTIQEA 96 Query: 233 PYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 + + G + + R F + L N + Sbjct: 97 NHAAATLLGVNQKYLVGKPLILFIAQQDRQFFCSQMNNFQELLNW--ELNLQPRGGKPFP 154 Query: 291 LAFILAVLISFSVCLLY------------------------------------------M 308 + + + Sbjct: 155 AMIKASAAYKLQGKQVGWRWLLCNISERKKTEEMLHQAYDELEIRVAERTAELVKANQKL 214 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDN 359 + + + A D LT L N A + + +D Sbjct: 215 LTEITERKRAESQLLHLAFYDILTGLANRAAFMNRLSHAINYSKRHSNYLFAVLFIDLDR 274 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + + L ++ + +L G E ++L G + + + Sbjct: 275 FKVINDSLGHLNGDQLLLATASRLQVCVRSIDTAARLGGDEFTILLEGIQDVSDVITVAE 334 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + + + + +L Q+ Sbjct: 335 RIQQELALPFELEGQEVFITASIGIALSSTLDYKHPEEVLRDADTAMYQAKVQGRAR-YK 393 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + ++ L +R A+++ + +Y QPI + G++ +L + G+ Sbjct: 394 LFNSDMYANALAKLQLETDLRRAIERLEFRVYYQPIVSLTKGSILGFEALLRWQHPERGL 453 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKNI 589 + P F+ L + L VL + + + SVNL Q ++ Sbjct: 454 LNPADFISLAEETGLIFSIGKWVLHEACRQMQAWRMCHDSNLLEKISVNLSLKQFSQPDL 513 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +I ++ + + LEITE +N + QL + G +++IDDFGTGY++ Sbjct: 514 IEQIGQILHSTGLDADTLTLEITESVIVANGDKVTATFLQLREMGIKLSIDDFGTGYSSL 573 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 RL ++KID F+ + N + I+ I LA + V+AE VET++Q A L Sbjct: 574 SRLYNFPISVLKIDRSFISLMSANKKNLEIIEIIATLAHKLGVDVLAEGVETKEQLAFLR 633 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 KL +Y QG+ P ++ Sbjct: 634 KLKCEYGQGHFFSVPLNSSE 653 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 118/723 (16%), Positives = 235/723 (32%), Gaps = 20/723 (2%) Query: 25 IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFL 84 + + L ++ ++ + + VL C + L L Sbjct: 36 MPVFAVAFALFAFRFLFMAISGSVAPQQVVLWAEVVHVAAGSVLLAGLCPHKGCRSLWLL 95 Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVG 144 + +VV + I + + + L + I + Sbjct: 96 IAVTTVSLMGWVVWASIHIAPMAAIIPSSLYIGAAMLAAALVFWRRARRIPGNGYSLVAL 155 Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 F + L + A V L + I + + S RR Sbjct: 156 LFALWGLHKLDYPWLAAVPQAVPYGFMLTQVLSIGLGVALLIAADRESRARENEGRRRSQ 215 Query: 205 APSLGKEKRAFTLSWLAALSV-LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 A + + + ++ + + G+ + Sbjct: 216 ALLHLQGEAMAATANAIFITDRAGRIEWCNKAFSQLTGWAETEAMGRGARRLLMGAERDR 275 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNR 320 + A+ N + T Y + + + + + Sbjct: 276 RMDEALKRGENWRGELNLRRRDGTLYVVDQNVTPIRDDRGRISHYVVVQEDVTERRRAEE 335 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMR 372 R + D LT LPN + ++ G + L +D+ + G Sbjct: 336 RIRFLSNHDALTALPNRLLFREQIQRAIGRAKTERHGLAVLILDLDDFSHYNDVLGHDGG 395 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILNSRQIHWN 429 H + +I L+ + E L ++ G E +L + + + R N Sbjct: 396 DHLLLAITERLMSTARGIESLARVGGDEFGFLLLTTDGGESVVELAGSLTKAMRRPFDIN 455 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 + +G + + LL ++ + + + + Sbjct: 456 GHDVQVGAAIGITLYPDDGADADTLLKNADMAMYRAIEDNPN-GYRFFAPTMDAELALRR 514 Query: 490 LLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 L + +R A+ + +L L+ QPI + + ++ +L D G ++P +F+P+ Sbjct: 515 RLESDLRKAIQRDELELHYQPIVDTQSRRIISFEALLRWNHADDGWISPVEFIPMAEGNG 574 Query: 547 LSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 + VL + + +VN+ L L ++++ + ++ + Sbjct: 575 MIGPIGEWVLRRACQQMRDWDRMGIPPVPVAVNMSALQLKRQDVPMLVRKMLTEAGVPSH 634 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE +A+++ + G R+A+DDFGTGY++ RLKR +KID Sbjct: 635 RLELELTETTVMEDADAAQRIFADIAGLGVRLAVDDFGTGYSSLARLKRFPVGKLKIDRS 694 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV D+ + DA I R+I + A L VVAE VET +Q A+L + G +QG+L R Sbjct: 695 FVGDLAEDEGDAAIARAIISMGHAMGLKVVAEGVETPEQLAILAEAGCDAIQGFLFSRAV 754 Query: 726 PLA 728 P Sbjct: 755 PAD 757 >UniRef50_A3QBK2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella loihica PV-4 RepID=A3QBK2_SHELP Length = 816 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 94/573 (16%), Positives = 196/573 (34%), Gaps = 24/573 (4%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL------AALSVLLLLLCTP 233 I S A+ + + T Sbjct: 238 VAGMLLTLTDITSIKRAKSQLDTENRRLKIMLNAIGDAVIATDSEAMITFMNPIAERLTG 297 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + G + + + + + N T + + Sbjct: 298 WVCRDAIGLHIEQVMDLCDAKTKYRSPNPVTIAIKEKRNVAMALNCQLNSLDGTTFQIED 357 Query: 294 ILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--- 347 A + + + + S ++ + A D LT LPN L Sbjct: 358 SAAPITDSEGKVTGGIIVFHDCSESVAMSLKMSHLANHDQLTDLPNRILLHDRINHACAV 417 Query: 348 -----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + ID+ ++++ G I+ + + L L+ N L ++ G E + Sbjct: 418 ADSYDKSVALMLIDIDHFKYLNDSLGHSYGDQVIKQVAKRLQSLIDPNATLGRIGGDEFV 477 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L+L ++ + + + + + + + + L+ + Sbjct: 478 LLLPSLTATSQVDSIATDIVRSLNTPFRIDGQEYTLSVSVGISIYPSDALRAEELMTHVD 537 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---G 516 ++ E + + TK+ L+ +RTA+D + +Y QP + + Sbjct: 538 AAMYRAKDLGRNR-FCYFSEDLEQELTKRHELVTLLRTAIDTEAIEVYYQPKVDLKTKEI 596 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G + + G +++P F+PL + L + +L+ + + + Sbjct: 597 IGAEALARLYDPSGKLISPLDFIPLAEETGLIHQLGEIILKQSCMAAKAWQKRGRPLQIA 656 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + ++ + + + LE+TE + + ++ + L G Sbjct: 657 VNIAAKQFTNPEFCDSVAKVLELTGLDSSFLELEVTESSLMYDFDEALNVLNTLSSLGLS 716 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IAIDDFGTGY++ LK + +KID FVKD++ + IV+++ LAK+ L ++A Sbjct: 717 IAIDDFGTGYSSLSYLKFFPVNTLKIDQSFVKDMLGDEQSLDIVKAVIHLAKSLKLKLIA 776 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E +E +Q L L + QGY+ +P PL + Sbjct: 777 EGIEDAEQLQKLVALECEQGQGYMFSKPLPLKE 809 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 106/568 (18%), Positives = 201/568 (35%), Gaps = 29/568 (5%) Query: 190 IVSPHFAQILWRRDIAPSLG-KEKRAFTLSWLAA-----LSVLLLLLCTPYENDFIAGYL 243 + L E++ L+ + ++ L ++GY Sbjct: 269 LSRLQRCLEELVAQRTALLEKSEEKYRILAEYSPNWEYWVAPDGSHLYVSPACGDVSGYS 328 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVST----LCLLNYNQNFLQGVETEYSLAFILAVLI 299 FF L + A E L ++ + Sbjct: 329 PADFFADPALMASIIHPDDRTQWAAQQARAVPGEASATVLRIRTRDGGERWLEHVVKPVF 388 Query: 300 ---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------- 349 + L + ++ D LT LPN + +Q Sbjct: 389 SPAGQLLGLRGSYGDITQRRQAEQQLDYVTHRDALTGLPNRALFTEFLDQAVQKAAHSRG 448 Query: 350 -KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 S + +D + ++ G + + R L L+ + + ++ G E +++ Sbjct: 449 EFSLLFINLDGFKTINESLGRSAGDQLLIEVARRLRELLPGVDAVARVGGDEFNVIVEHD 508 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + S +G ++ + + LL ++ Sbjct: 509 VAGLGIDLVAQRIINALSHSYQLGAQSAYIGACIGIAQYPADGPAAESLLNSADAALHRA 568 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 A L ++ + +++ L +R AL QG+L L+ QP + G + + Sbjct: 569 KAQGRN-VLRFFSPELTIRARERLSLEADLRRALQQGELALHYQPQVDLRSGRIVGVEAL 627 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMP 581 L G + P F+PL + L VL + + + PR +VN+ Sbjct: 628 LRWRHPQRGWIAPGAFIPLAEECGLIIELGDWVLRAACEQIRHWSDAGVAPRQTAVNISA 687 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + + + R I+P + LEITE E S + L G +++IDD Sbjct: 688 VQISSGGLLDTVRRTLAATGIAPDRLELEITESFVMFERERSFKLLADLRALGVQLSIDD 747 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L++L+ +KID FV+++ N +A IV+++ + + L V+AE VE Sbjct: 748 FGTGYSSLAYLQQLEVHKLKIDISFVRNMTRNRGNASIVKAVIAMGHSLGLEVIAEGVEE 807 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q A L L +QGYL+ +P P+ D Sbjct: 808 IEQAAHLLALQCDVMQGYLVSKPLPVDD 835 >UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5B4_GEMAT Length = 966 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 113/723 (15%), Positives = 235/723 (32%), Gaps = 58/723 (8%) Query: 42 IFLAWMPLCVM--LSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLC 99 + W ++ +IL + G +V L + + + ++ ++ Sbjct: 239 ASILWRRTALIPRANILVLIGGALLVRFLGHVASISEMHGGEGLPDLGFVVRPAACFLMA 298 Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 A L R + + + P + + F + G Sbjct: 299 AAGWLSSATVMRRDVRPSRDRDGPSVS----ILPYAAVVPGFALLLRMAFEERHQPLLGL 354 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 + + R + A A + E R +L Sbjct: 355 VLGAAALTAI---------------AFVRQFAASREAVSTL--AEASARDSEARFRSLVQ 397 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVP-----------VFFIIFTLGVGKLRYPFLNLTWA 268 ++ ++++ + V + ++ L + Sbjct: 398 HSSDVIMIVDPDGTLRFASPSMSTVFGHEPSRIVGTNLLSLLHVEDQQHAVQFLEELARS 457 Query: 269 VSTLCLLN-----YNQNFLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSEWLNRR 321 + + + ++ + L+ L+ R + ++ Sbjct: 458 GARTGAGSPGVLKREWRLAHSDGSWMTVDNVGTNLLREPVVRGLVLNSRDVTEQSMIKQQ 517 Query: 322 WHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 + QA DPLT L N Q + + L +DN + ++ G Sbjct: 518 YIHQAFHDPLTDLANRSLFLYQVGHALARGARQHSPVTVLFLDLDNFKTVNDSLGHAAGD 577 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNN 430 + R L ++ ++ + +L G E +++ ++ + + + + SR + Sbjct: 578 RLLVDAARRLASCVRSSDLIARLGGDEFAVLVEDAQSVEEVLVVASRIGTALSRPFMLSG 637 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + + R E+ L+ + + E+ + ++++ Sbjct: 638 KEVFVSASVGIARSSR-GESSDELVRNADVAMYVAKTRGKGQHV-LFEQEMHDAALERLV 695 Query: 491 LLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + +R A+++ + L QPI G + ++ L + G + P F+P+ L Sbjct: 696 VEADLRRAIEREEFFLEFQPIVELDTGNIIGAEALVRWLCRERGTVPPGVFIPIAEVTGL 755 Query: 548 SARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VL + R +VNL L I + + + + P Sbjct: 756 IVPIGKWVLRRACREAQRWTRERGIAARITVNLSGRQLQDAGIVDDVRQALEETGLDPTQ 815 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 ++LEITE N + SM + L + G +AIDDFGTGY++ L+R DI+KID F Sbjct: 816 LVLEITESMLMQNTDVSMARLTALKELGVSLAIDDFGTGYSSLSYLQRYPIDILKIDKAF 875 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V I ++ +I L ++ VAE +ET+ Q+ L LG + QG+L P Sbjct: 876 VDVIDKGGEGPVLASAIVALGDTLRMNTVAEGIETEAQRGHLLTLGCELGQGFLFSPPLD 935 Query: 727 LAD 729 + Sbjct: 936 EEE 938 >UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='Nostoc azollae' 0708 RepID=B9YGE9_ANAAZ Length = 637 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 101/561 (18%), Positives = 210/561 (37%), Gaps = 28/561 (4%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC---TPYENDFIAGYLVPVFF---- 248 +R A ++L++ + F+ + +P Sbjct: 58 EISECQRIQPELQKLLLLQKATLESATDAILIVDSLDKIVGFNKKFLEMWDIPALMITSG 117 Query: 249 -----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + +L++ + ++ +N L ++ + ++ Sbjct: 118 NYKQALRTAIKKLDNPRHYLSILRELDENPDIHIGENILFKDGRIFNPFYQQQYKYKKNI 177 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF----RALEQAP---EQEAGKSFCCLR 356 +++ R + + + ++L D LT LPN L A C L Sbjct: 178 GQVWIFRDITAEKLASNIINYESLHDILTNLPNRLLLKNLLIDALTKVSHNHSLGVCFLD 237 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + ++ + + + ++ ++ + + G E +++L + Sbjct: 238 LDRFKKINDSLGHGIGDKLLQMVAQCIKKSLRSDDIVARWGGDEFIILLPEISEMYNIDL 297 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + +N L++ + + E + L+ Sbjct: 298 IQERIFAAFKQGFKIDNYHLNISPSIGIALYPQHGEDGETLIKNAEAALSFVKLQGRN-N 356 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + ++ Q T+ +L N++ AL++ + +Y QP N E + +L + Sbjct: 357 YKVYQAAINSQATELFILENSLYNALERQEFKVYYQPQVNSSTGEITKMEALLRWQHPEL 416 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKN 588 G++ P F+P+ + L VL++ + +VN Q N Sbjct: 417 GLIPPATFIPIAEETGLILPISEWVLKTACLQNKAWQQTLNLSSLSVAVNFSGRQFQQPN 476 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + G + ++ ++ + + LEITE A + E + + QL + G I+IDDFGTGY++ Sbjct: 477 LVGIVEQVLCETKLAHRYLELEITETVAMQDVELTQKILRQLDEMGVTISIDDFGTGYSS 536 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK +KID FV+D+ I +I LA +LSVVAE VETQ+Q L Sbjct: 537 LSYLKDFSIHALKIDQSFVQDLANKDHQTAITTAIISLAHGLNLSVVAEGVETQEQLNAL 596 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 L + +QGY P + Sbjct: 597 RILQCEIMQGYFFSHPLSAEE 617 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 137/683 (20%), Positives = 243/683 (35%), Gaps = 62/683 (9%) Query: 93 QTFVVLCACAILRWQLGTRWRYGLT-SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 F ++ A L R L R L GI ++ F P+ Sbjct: 11 VAFSLIVAILASYTALDMAGRVTLAKGREALSWLIGGAFAMGFGIWSMHFVGMLAFSLPI 70 Query: 152 KI---------------------STFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 + A+ + + L +L I M + + ++ Sbjct: 71 PLGYDLGLTLLSLLLAVGSSAFALWLVCQAELPWQRLALGALLMGSGIAAMHYTGMAALL 130 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + P P + A + L + + Sbjct: 131 MMPG-------IVYDPLWLGLSILIAVIASGAALWIAFRLRHGSRRIVLVRAGAALVMGC 183 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 + + + A L ++ I+ L ++ L+ V Sbjct: 184 AI-----VGMHYTGMAAAQFPLGSFCGAA-GRGIDNGWLAVLVIVITLAVIAIALIVSVL 237 Query: 311 I----------YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSF 352 NR AL D LT LPN L+ EQ + Sbjct: 238 DSRLEARTSVLATSLARANRELIQLALHDNLTKLPNRMLLDDRLEQAIQQAIRDDRRFAV 297 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D + ++ YG + + + + ++ + + +L G E +L++ Sbjct: 298 LFMDLDGFKAVNDAYGHHLGDLLLIEVAERIRANVRAQDTIARLGGDEFVLLIE-AREPA 356 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + L S+ + + + + G+ +T L+ + Sbjct: 357 DAATLAEKLVKRISQPYQISRHEVRISASIGIALYPGDGQTRHELMINADAAMYHAKDQG 416 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 E ++ +Q+ LL+ +R AL++ L+L+ QP N G + +L Sbjct: 417 RN-GYCFFESSMNANAQEQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMIGVEALLRWE 475 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLL 585 G++TP +FLPL + L + VL+ + + +VNL L Sbjct: 476 HPQHGLITPGQFLPLAEKTGLIVQIGEWVLDEACRQMRLWLDGGHADWNIAVNLSALQFA 535 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + + R+ + P +ILE+TE A +A++S+ +EQL G I+IDDFGTG Sbjct: 536 HAGLVDSVRNALLRHSLEPSHLILEVTESTAMRDADASLVILEQLSAMGVGISIDDFGTG 595 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL A +KID F+ ++ ++ DA IV +I L + +L +VAE VET+ QQ Sbjct: 596 YSSLLYLKRLPASELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVETEAQQ 655 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L +LG LQG+L+GRP P Sbjct: 656 EFLTRLGCNSLQGFLLGRPMPAE 678 Score = 92.7 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 28/291 (9%), Positives = 72/291 (24%), Gaps = 8/291 (2%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLS--ILFI 58 + I+++ F + + + + S + + + L Sbjct: 44 LIGGAFAMGFGIWSMHFVGMLAFSLPIPLGYDLGLTLLSLLLAVGSSAFALWLVCQAELP 103 Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 + + +L G + ++ L + + + I G Sbjct: 104 WQRLALGALLMGSGIAAMHYTGMAALLMMPGIVYDPLWLGLSILIAVIASGAALWIAFRL 163 Query: 119 RYVWQRLF----WLGLVTPIGIKCSMYLVGSFFDFPL-KISTFFGDADAIFTVVDLLSLF 173 R+ +R+ LV I Y + FPL G + L+ + Sbjct: 164 RHGSRRIVLVRAGAALVMGCAIVGMHYTGMAAAQFPLGSFCGAAGRGIDNGWLAVLVIVI 223 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 T +I L + + + + A + +LL Sbjct: 224 TLAVIAIALIVSVLDSRLEARTSVLATSLARANRELIQLALHDNLTKLPNRMLLDDRLEQ 283 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 I + G + + + + + + + ++ Sbjct: 284 AIQQAIRDDRRFAVLFMDLDGFKAVNDAYGHHLGDLLLIEVAERIRANVRA 334 >UniRef50_C6P797 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P797_9PROT Length = 830 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 96/596 (16%), Positives = 193/596 (32%), Gaps = 32/596 (5%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 T+ L L + R+ R K + W + Sbjct: 225 LTLAFNHMLSEIQDRDESLLRHQDRLEKEVVKRTEELARTNDELALAAKMSTLGYWEYDV 284 Query: 224 SVLLLLLCTPY------ENDFIAGYLVP----VFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 Y + GY + I ++ + Sbjct: 285 LAREFTFNDQYYSLHFTTASEVGGYRLSYEDFAKRFIHHEDTQRISDHIQFELDSSEADF 344 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDP 330 ++ L + + L + + + QA DP Sbjct: 345 VVETEIRTLCADGSMRWMRIRFKSQSDEHGRKYKLTGVSQDITEKKRSEETIWQQANFDP 404 Query: 331 LTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN R + E + + +D + ++ G + + Sbjct: 405 LTGLPNRRMFQDRLEHEIKKSNREGLPLALMFIDLDKFKEVNDTLGHDKGDILLVEAAQR 464 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGA 439 + ++E++ + +L G E ++LS + ++ + + + Sbjct: 465 ISGCVRESDTVARLGGDEFTVILSELDDANSIERIAQAIIQALVAPFLLAEEVAFVSASI 524 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + L+ L+ S + + ++ L+N +R AL Sbjct: 525 GITLYPNDAPNLELLMSNADQAMYASKSAGRNR-FSYFTPSMQAAALNRMHLINDLRDAL 583 Query: 500 DQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 + L+ PI + + ++ G++ P +F+ L + + V Sbjct: 584 SRNQFRLHYHPIVELSSGNIHKAEALIRWDHPVRGLINPAEFVALAEESGMIVEIGDWVF 643 Query: 557 ESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN--IAGRIIRLFKRYHISPQAVILEITE 613 ++ + + + SVN P+ + + ++ + + + +EITE Sbjct: 644 RESVRQVLRLREEHHPEFQISVNKSPIQFRNDDRYFRDWLPH-LQQLGLPGECITIEITE 702 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 ES + L G ++A+DDFGTGY++ LK+ D IKID FV+++ Sbjct: 703 GLLLDATESVQAKLLDLRDAGIQVALDDFGTGYSSLSYLKKFDIDYIKIDRSFVRNLTAT 762 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D ++ +I +A L V+AE +ET Q+ LL G Y QG+ RP P + Sbjct: 763 SDDMVLCEAIIVMAHKLGLKVIAEGIETATQRHLLTAAGCDYGQGHFFSRPLPSHE 818 >UniRef50_A3ESX6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Leptospirillum sp. Group II RepID=A3ESX6_9BACT Length = 703 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 97/593 (16%), Positives = 201/593 (33%), Gaps = 30/593 (5%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 +F + + F R I + K Sbjct: 93 VFWGEAWGAAVHNRKGDRIGFMVAVRDISRRKQLIHDLHLEKEQWFVTLKSIGDAVVTTD 152 Query: 223 L------SVLLLLLCTPYENDFIAGYLVP-VFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + T ++ + G+ V VF I+ P + + L Sbjct: 153 EHGRVTYVNPVAEHLTGWKVEEADGHPVSKVFRIVNEYSREPAENPVDRALLEGTIVGLA 212 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLT 332 N+ L E+S+ A + + + + R L +R QA D LT Sbjct: 213 NHTL-LLSRSGEEFSIEDSAAPIQDNNGEIRGCIIVFRDVTEKRKLEQRIAYQANFDSLT 271 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN + + + L +D + ++ G + + + L Sbjct: 272 DLPNRHLFQDRLSRAVGQAHRTGSLVALLYLDVDYFKNINDRMGHPYGDRVLVELGKRLK 331 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAW 441 +++E + + ++ G E ++L + L + + + D+ Sbjct: 332 TVVRETDTIARIGGDEFAVILCDLHDRSEAMVLGRRLMIEAAMPFRIDGSRADLTVSIGV 391 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + L+ Q + ++ + + +R ALD+ Sbjct: 392 ALYPEDGTDATTLIRNADIALYQVKREGRN-NIAFFSREMNRFVQSTLKTESELREALDK 450 Query: 502 GDLLLYAQPIRNKE---GEGYDEILARLKYDGGIM-TPDKFLPLIAQFNLSARFDLQVLE 557 L QPI + G + +L G + P++F+P+ + L +L Sbjct: 451 NRFYLAYQPIVHLGSALAVGVEALLRWRH--RGKVRFPEEFVPIAEEMGLILPLGQWILR 508 Query: 558 SLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 ++ R +VN+ + + + + + + P + +EITE Sbjct: 509 EAIREAGVWIRQGINLGRLTVNVSVKQIHSEGFSDFLESTLRENGLPPSVLEIEITERTL 568 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 ++ + ++ + G +++IDDFG GY++ ++ + +KID F+ +++ N D Sbjct: 569 MFRDHHTVSTLNRIREMGVKVSIDDFGIGYSSLNYIRNFPVNTLKIDRSFLAEMLDNHYD 628 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I +A++ S+ VVAE VE +Q L + G QG+ P + Sbjct: 629 RAIVRAILAMAQSLSIDVVAEGVERLEQARFLQENGCLMAQGFFYSEPVSPEE 681 Score = 43.4 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 28/119 (23%), Gaps = 12/119 (10%) Query: 217 LSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV-- 269 + ++L + L + GY + R + Sbjct: 13 ILQSMGEAILAVDLSRQILWINVGFTRLFGYDPEEVVGRKPDFIYADRNDYEEQGRLRYN 72 Query: 270 --STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 + Y +++ + A + + + VR R + L H Sbjct: 73 LEAPSVQTPYEMRYVKKDGQVFWGEAWGAAVHNRKGDRIGFMVAVRDISRRKQLIHDLH 131 >UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30P04_SULDN Length = 770 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 92/426 (21%), Positives = 176/426 (41%), Gaps = 15/426 (3%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGL 369 + D LT LPN L E S L +D + ++ Y Sbjct: 337 AANELEHLSRHDHLTNLPNKTLLIDRLEHSINVASKNGQKVSILFLDLDRFKEINDTYNH 396 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIH 427 + ++ I R L L++E + + + G E +++L+ ++ + NI+ S + Sbjct: 397 EVGDKLLQDISRRLKKLIKEEDTIGRFGGDEFIIILNNSNETQTVEVVTNIMSAMSEPFN 456 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N L + F + + L+ ++ ++ ++ ++ + Sbjct: 457 VNKVKLHTTFSIGISIFPDDGNSRDILIRNADTAMYEAKSNGKNR-YQFYDKKMTELAFE 515 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L + +R A+ + +Y QP + G + ++ + G++ P KF+P Sbjct: 516 RTTLESNLRKAIQNEEFEVYFQPKIDARVDKVIGLEALIRWNHPELGLIPPVKFIPFAEN 575 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L D ++ + + + S+N+ L N + + I Sbjct: 576 IGLIIEIDRWMMREAAAQVLLWKKENIVCGKLSINVSAKQLEDDNYVEFLSQKINDIGID 635 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + +EITE ++ + + + G I++DDFGTGY++ LKRL D +KID Sbjct: 636 PKDLEIEITEGLIMKHSLHVTSTLNAIRELGISISVDDFGTGYSSLSYLKRLPIDKLKID 695 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FVKD+ + D IV++I LA SL ++AE VET++Q+ L G +QGY + Sbjct: 696 RSFVKDLPHDKDDIAIVKTIIALANNLSLELIAEGVETKEQRDFLLSEGCHNIQGYFYSK 755 Query: 724 PQPLAD 729 P + + Sbjct: 756 PLKVNE 761 >UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Actinomycetales RepID=A0LUZ3_ACIC1 Length = 949 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 134/739 (18%), Positives = 247/739 (33%), Gaps = 46/739 (6%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT 74 TL V+L + + FLA + + + + + P+ G + Sbjct: 187 TLHAIAAVLLGTAAIAAIARCRLEGDIPFLALFLIGAGVIVCELGDLFSLRPLALGEWSP 246 Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 ++ L+ V+ + T R L + + L V P+ Sbjct: 247 RHPSYLLAVAGRLVLGLAVL-------------SRTAERADLVQLRRREYIAVLTPVLPV 293 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 S+ + + L+ +T L A L + L+R + Sbjct: 294 LAVGSLLIAAAVMRVSLRPATLILLGVLGIL------LLLAWLAARLDQLLLSRTLEHRV 347 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 + L R A + + ++ TP + + F Sbjct: 348 VERTLALRTHAKWFRSLVQNSSDIITIVDPSGVIRYQTPSATRVLGYDPNAMVGQRFVSL 407 Query: 255 VGKLRYPFLNLT---WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMV 309 V L + ++ L+ L+ Sbjct: 408 VAPADVHRLEAILLDAVLRPRSTHTIEFAMRHAAGHWRETETVITSLVDDHDIRGLVLNT 467 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLE 361 R + L R+ QA +DPLT L N E + L +D + Sbjct: 468 RDVSERKELERQLTRQAFSDPLTGLANRALFANRVEHALSERSRQPGEVAVLFLDLDGFK 527 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG---RLQHMV 418 ++ G + H + + L ++ ++ + +L G E +++ GP+ E + V Sbjct: 528 GVNDAQGHAVGDHLLTLVADRLRRCVRPSDTVARLGGDEFAILVVGPQAEAHGVDVAERV 587 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + + + D ET+ LL ++ + Sbjct: 588 QRALAEPFLLSGREVTLAASIGIAVTDDGTETVDQLLRNADLAMYRAKSSRKG-TYVRFR 646 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 + +V +R AL + +L+L+ QP N + G + ++ G++ P Sbjct: 647 TEMHDALLARVQTETDLRHALSRRELVLHYQPTVNLRTGQVVGVEALIRWYHPTRGLIQP 706 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGR 592 F+ + + L + + A + +VN+ L + Sbjct: 707 MDFIGMAEETGLVESIGAWAIRECCRQGARWQRYAQPGGVFHVAVNVSGRQL-HPRLPDI 765 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + P A+++E+TE +E ++ + QL FG R+AIDDFGTGY++ L Sbjct: 766 VRTALTETGMPPGALVIEVTENILVKRSEEAIAVLRQLKSFGVRVAIDDFGTGYSSLSYL 825 Query: 653 KRLQADIIKIDGVFVKDIVT---NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 R D++KID FV+ I T +VR+I L +A L VAE +ET++Q A L Sbjct: 826 ARFPVDVLKIDKSFVEQITDRNSGTEGTELVRTILHLGRALRLGTVAEGIETREQYAALL 885 Query: 710 KLGVQYLQGYLIGRPQPLA 728 + Y QGYL RP P Sbjct: 886 AMSCDYGQGYLFSRPLPAE 904 >UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7N9_AZOSB Length = 889 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 106/748 (14%), Positives = 235/748 (31%), Gaps = 38/748 (5%) Query: 17 AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNL 76 +V + + + S + ++ + + ++ + L G+ T + Sbjct: 133 HIRARLVDPAQTSALDLRVMHASLRAAGVRVESVLLADMNGRYAFQRDLDRLIGLLLTAM 192 Query: 77 W--NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 L + + + +V + + + R + + Sbjct: 193 MLVVIGLRYRASVRQRHALLRLVDSEARLRAFAYAMPDTAFILDREGRYIEVFGMGRSLT 252 Query: 135 GIKCSMYLVGSFFD--FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI-- 190 + + FD + F G T +++ ++ + ++ R+ Sbjct: 253 PYGHERMVGATVFDYFPRPQAENFVGVVRDALTRGEVVRYEYSLRLAGGTRWFEARVAPV 312 Query: 191 --VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYL 243 + + + + + V++ L I GY Sbjct: 313 DSMQRVVWVSRDVTERRRAEERIRLHAVALEGTRDGVMVTDLHGRIQSVNRAFTSITGYS 372 Query: 244 VPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + A+ + + ++ + Sbjct: 373 EEEAIGKTPGLLKSGRHDPSFYRGIWSALLSGGYWQGEIWNRRRNGEVAPHWMSISAVGE 432 Query: 301 FS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + + R A D LT LPN + Sbjct: 433 QGHPYEHYVAVFTDISQLRQFEERVSHLANYDLLTDLPNRLRMSDCLETAIAAARRSHTQ 492 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + +D + ++ G + + + L ++ + L + G E LLVL Sbjct: 493 VGVMLVDLDRFKNVNDALGHALGDELLAGVAERLRKHLRHGDTLGRYGGDEFLLVLEQLR 552 Query: 410 TEGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 G + + + L + + + +T L+ ++ Sbjct: 553 DAGEAAAVARTMNSALDQPFLMRGGQELYIKASIGISLYPEDGDTAAELIKDADAAMYEA 612 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 +E ++ +++ L + +R ALD+ +Y QP+ + E G + + Sbjct: 613 KRLGRN-TFRYYQEDLTRTANERLALESRLRRALDESMFEMYYQPLVALNSGEVLGAEAL 671 Query: 523 LARLKYDGGI-MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLM 580 + DGG + P F+P++ + + A V + + + ++NL Sbjct: 672 VRLR-PDGGPRIGPADFIPVLEESGMIAELGRWVQREVCRQGRAWLDAGYDFQLLTLNLS 730 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + + + + + + + +EITE ++ + +L G R++ID Sbjct: 731 AEEVRRGGVVDNLREVLAETGFPAEKLEVEITESGLMQRGSEALDFLYELKGLGVRLSID 790 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK + +KID F+ DI + D + +I LA+ L V+AE VE Sbjct: 791 DFGTGYSSLSYLKLFPVNKLKIDRGFITDIPEDQNDVQLTTTIIALARNLGLDVLAEGVE 850 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T+ Q+ L + G QGYL P A Sbjct: 851 TEAQRTFLAEKGCDAYQGYLCSPPVEAA 878 >UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5L4_9RHOB Length = 854 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 112/633 (17%), Positives = 219/633 (34%), Gaps = 26/633 (4%) Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 ++ + +G+ + L +F F + + +L + + Sbjct: 207 LFSDINRDHTAAFLGVLALVILAATFVVFRMGLRAERLQTIYEMARKHQAALQHKNVELS 266 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + + R + +A L + +L + Sbjct: 267 AEISHRQIVEHDLKTKSEELDRTNENLKIAATAFESQEGMAVLDMGGRILRVNAALARLM 326 Query: 241 GY-LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 G + +F + L L A+ C + SL F L+ + Sbjct: 327 GCEPNSLLGRLFEEMIVDEEAGGLGLNTALREGCPWKGDVRTKAVSAAGASLWFTLSPVM 386 Query: 299 --ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEA 348 ++ R+ A D LT LPN + Sbjct: 387 SDKGLPTSMIGTFYDVSDRRKAERQIKRLAFYDQLTGLPNRHLATDRTIQAMRTNAQSGE 446 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G + ++++ + + + + + G E +++L Sbjct: 447 FGALLFIDLDQFKRLNDTLGHDVGDKLLKAVADRISRRLGGDSTVARFGGDEFVVLLPTL 506 Query: 409 ETEGR---------LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 +T +V + + + F ET +L + Sbjct: 507 KTVIERDAALLAEHAAELVLRIFKQPFQLEGYEHNCSTSIGIALFSAPLETFDDILKRAD 566 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGE 517 ++ + + + ++V L +RTA+D+G+ + QP N Sbjct: 567 IAMYEAKGAGGN-VIRFFDPEMQRVVREEVSLDADLRTAVDRGEFEFHLQPQINRFGTVV 625 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRF 575 G + +L G+++P F+P+ + L VL+ K L+ Sbjct: 626 GAEVLLRWPHPVRGLVSPGVFIPIAEKSGLIVPLGNWVLDCAAKVLSNWAAKELFSDINL 685 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 S+N+ L ++ ++ +R+ P+ + LEITE +N + ++ + L + Sbjct: 686 SINVSANQLHSEDFVETVLGAIERHGARPRRLKLEITESLLVNNLDDAIRKMTALQQHEI 745 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++DDFGTGY++ LK+L D +KID FV D+ N DA I I L + L V+ Sbjct: 746 LFSLDDFGTGYSSLSYLKQLPLDQLKIDRSFVSDLPQNKNDAAIAEMIVALGRTLGLHVI 805 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET++Q+ L +G QGYL G P PL Sbjct: 806 AEGVETEEQKGFLEGIGCDQFQGYLFGVPMPLD 838 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 126/744 (16%), Positives = 261/744 (35%), Gaps = 36/744 (4%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLS----ILFIFGWRGVVPVLCGMFCTNL 76 L + R + AI ++ + + +L+ ++ + G+V + + Sbjct: 244 AGGLDGVQRVFAYRAIEGFPFVVIVGLAEAEVLAEWRRRAVVYAFLGIVLAVALIALMRS 303 Query: 77 WNFHLSFLQTAVMLGSQTFV--VLCACAILRWQLGTRWRYGLTSRYVWQRLFWL---GLV 131 W + ++ F A+L W Y+ + GL Sbjct: 304 WGMGYRQAEALAEKLAKDFADKTREGRALLDSIPDPAWLLDNEGHYLAVNEAFCHYKGLP 363 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL-FTAVLIYNMLFYYLTRMI 190 + ++ + + + V +++ L L Sbjct: 364 MEQVLGHTVDELFPAEEAKVLRDGQLEVYRKGGPVREVVWLHLRGKLSPFEFLRVPVYRD 423 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTL---SWLAALSVLLLL-----LCTPYENDFIAGY 242 D+ E+R + A +VL+L + I+GY Sbjct: 424 DGQPRGLAGVAWDMTERYEAEERQRLITHFFDHANDAVLILDAERQVVTLNKAVTTISGY 483 Query: 243 LVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + F L + + L+ A++ + ++ + + ++ + Sbjct: 484 SLDDLKGRPPRFMLEGYQDKVSLDELSLALNEQGVWRGEMKAVRKDGSLLPIYCNISSIR 543 Query: 300 SFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAPEQEAGKSF 352 + + ++ V + R D LT LPN + + + Sbjct: 544 NDAGKVVNWAVFVTDLSERKAAEARIESLTHVDQLTELPNRQGFSRIMGEWLAAARKGAL 603 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D L ++ +G +R I L ++++ + L +L G + ++L+ Sbjct: 604 ILIDLDQLSRVNDAFGHAAGDAMLRRISVRLRKILRDGDFLGRLGGDQFGVLLAQGIRPV 663 Query: 413 RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + L ++ + + + A + + LL + Sbjct: 664 VAEVVARKLLDAIAQPVMIEGSDIVTTASAGICLLGSDGHDVASLLRNADNALHHAKDSG 723 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 A ++ + +++ L + +R AL + +LLL+ QP + E G++ +L Sbjct: 724 QN-AFRFFSADMNVRMAERLRLESDLRWALSRNELLLHYQPQVDINSGEIIGFESLLRWQ 782 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLL 585 + G+++P F+PL + L VLE + P+ +VNL + Sbjct: 783 HPELGMVSPVNFIPLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKVVAVNLSAVQFH 842 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 +I + + + + + + LEITE + E + +++L G ++IDDFGTG Sbjct: 843 GADIVALVSQSLQNSGLEARYLELEITESVIIEDPERVIRIMDELKMLGVGLSIDDFGTG 902 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR D IKID FV+D+ NT DA I+R + +A+ V+AE VET +Q Sbjct: 903 YSSLSYLKRFPIDKIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVIAEGVETVEQL 962 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L QG+ P + Sbjct: 963 EFLRSHHCDEYQGFYCSPGVPAGE 986 >UniRef50_C0N5T0 NMT1/THI5 like family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5T0_9GAMM Length = 1410 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 106/570 (18%), Positives = 206/570 (36%), Gaps = 29/570 (5%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + I A+ + + + A +L+ I G Sbjct: 712 HTLVILYDISERKKAEERLKMSGRVFNQAHEG---ILITDAKGLLV---DVNPAFSEITG 765 Query: 242 YLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y R F + ++ L+ ++ ++ L Sbjct: 766 YSREEVIGKNPSILQSDKHSRVFFQEMWTSLEEKGHWQGEIWNLKKNGQLFAELLTISTL 825 Query: 299 ---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 ++ L + +S+ L A D LT LPN Sbjct: 826 VDERGETLHYLGLFSDITQSKEQQHALELMAHYDMLTQLPNRTLFADRFHQAIAHSKRNH 885 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + L +D + ++ YG + + + + + +++++ +L G E +L+L+ Sbjct: 886 SLLAVVFLDLDGFKPVNDRYGHDVGDQLLIEVAQRIKASIRQDDTASRLGGDEFVLLLND 945 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + ++N + + + + + + LL Q Sbjct: 946 ISSVDHCERLINRIRHAIELPYQLDEDTISLSASLGITIYPLDDADADTLLRHADQAMYQ 1005 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + + + Q ++Q I+ AL L+L+ QP N + G + Sbjct: 1006 AKLAGRQR-HHIFDALHDQQISQQQNQYKAIQDALKADQLVLHYQPKVNMGTGQIIGVEA 1064 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 ++ + G++ P +FLP I L V+E +++ + D S+N+ Sbjct: 1065 LIRWNHPEHGLVLPGRFLPAIQGTELEIHVGNWVIEHVMQQVEAWLRDGIEMEISINISS 1124 Query: 582 LTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHK-FGFRIAI 639 L K ++ + R+ H+ + LEI E S+ I G RI++ Sbjct: 1125 HHLQWKGFFEQLDHVLGRHPHVPANLLQLEILESSVLSDINKISSIINTCRNVLGIRISL 1184 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L+ L D++KID FV+DI+ + D I+ + L +A V+AE V Sbjct: 1185 DDFGTGYSSLTHLRHLPVDVVKIDQSFVRDIIDDPNDYTIIDGVIGLTQAFHHQVIAEGV 1244 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET + +L +G + QGY+I +P P D Sbjct: 1245 ETIEHGLMLMTMGCELAQGYVIAKPMPAKD 1274 Score = 48.8 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 13/176 (7%), Positives = 41/176 (23%), Gaps = 17/176 (9%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 + ++ + + + + + + R+ E R + + + Sbjct: 556 WLGLTVTSGPQLATLIKISSAVMVLFLLFAYWIYRLRKSGRALAQSETRLREVLNASPVP 615 Query: 225 VLLL-----LLCTPYENDFIAGYLVPVFFIIFTLG----VGKLRYPFLNLTWAVSTLCLL 275 +L + GY + + K + W + L Sbjct: 616 QGILNEVGQVTYLNQAFITTFGYTLADIPTVNDWWQKAFPEKTHRETIQAEWQLHIEDSL 675 Query: 276 NY-------NQNFLQGVETEYSLAFILAVLISF-SVCLLYMVRIYHRSEWLNRRWH 323 N + + + ++ + S L ++ + R Sbjct: 676 NRSDTLKPVESDVVCKNGDKKTVICNATHVASATDKHTLVILYDISERKKAEERLK 731 >UniRef50_C6MGV8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGV8_9PROT Length = 813 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 109/549 (19%), Positives = 200/549 (36%), Gaps = 28/549 (5%) Query: 205 APSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF---FIIFTLGVG 256 + + +A T+ + +++L + C + Y + F Sbjct: 248 RLAKDRLAQAATVFECSTEGIIILNKNKLVDCANNAFYSMTQYQERNLKNKELPFLTHRS 307 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 + +L +V T + + + + ++ + + M+ Sbjct: 308 LNGNIYEDLWHSVETHGCWRGEIKAFKRNKEIMYIWLTIGLIPVETGMEKQFVVMISDIT 367 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSR 365 + + A D LT LPN + Q + +DN + ++ Sbjct: 368 KIRETQEQLAHFAYYDSLTNLPNRILIMDRLNQAIAKAARDSSLLGILFIDLDNFKRIND 427 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + I + +L ++++++ L +L G E + V E+ L + + Sbjct: 428 TLGHKHGDSMLCLISQRILSVLRQSDTLGRLSGDEYIAVAGNVESYDALIRIAGKILDCI 487 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S+ + +N + + + E L+ ++ + ++ Sbjct: 488 SKPVVLSNMEIIPSCSIGISVYPHHSENPDHLVQMADTAMYEAKKNGRN-NYAFYHPGLT 546 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFL 539 + + + AL + LLY QP + E G + ++ G++ P + + Sbjct: 547 QRAAHHLTRERELHHALINDEFLLYFQPQFSLINKEIIGVEALIRWKHPKRGLLLPAEII 606 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ L VL+ K L D R SVN+ L N+ I +L Sbjct: 607 PVAETSRLIIDIGNWVLKEACKQLHQWRTDGLDNLRMSVNVSIRQLADNNLQKFIAKLLH 666 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 +Y + ++ LEITE N + +EQL K G I+IDDFGTGY+ LK L Sbjct: 667 QYSLPAHSLELEITESCL-QNELIYISCLEQLKKLGILISIDDFGTGYSCLSSLKNLPIH 725 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FVK I + D I ++ LA+ +L V AE +ET Q L G LQG Sbjct: 726 RLKIDQSFVKGIPLDKNDCAIATAVLALAQKLNLQVTAEGIETYDQITFLLGHGCNELQG 785 Query: 719 YLIGRPQPL 727 Y + +P Sbjct: 786 YWLSKPVSP 794 >UniRef50_B0CBA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=66 Tax=cellular organisms RepID=B0CBA7_ACAM1 Length = 705 Score = 638 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 107/646 (16%), Positives = 210/646 (32%), Gaps = 49/646 (7%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 + ++ + + I G D + + + T Sbjct: 50 AVQRHQHDIYVFDFRLGSRTGLDLLEEVVALGHRIPIILLTGQEDREIDLAAMTAGATDY 109 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLC 231 L+ M+ L S +A R + +E++ ++ + + + Sbjct: 110 LVKGMITSALLE--RSIRYAINHTRTLV-ALQEREEQYNLVAQASNDGLWDWNLQTHQVY 166 Query: 232 TPYENDFIAGYLV--------PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 I G F I + R L Sbjct: 167 YSPRWAAIIGQAEVTLQPSIQEWFDRIHPEDKERFRIDLRRHLR--RETTAFECQYRMLH 224 Query: 284 GVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 ++ ++ + V + + AL D LT LP+ Sbjct: 225 RDQSYRWVSSRGMAVFGPKNRVVRMAGSHTDLT---------NHVALYDHLTGLPSRALF 275 Query: 341 EQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + L D + ++ G + + + + L ++ + Sbjct: 276 LDQLHRTLTRVNRQTNYLFAVLFLDCDRFKVINDSLGHAIGDQLLIEVAQRLTTALRPGD 335 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L + + + + + L + + + + Sbjct: 336 VIARLGGDEFAILLENIAGQDQAEQVASRLNRELEKAFELQGHTVYISASIGIALNSDHS 395 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + LL ++ A E + + + + +R A+ + LY Sbjct: 396 PQAENLLRDADNAMYRAKALGKSR-YVVFEAAMRDRVQALLRVETDLRAAIANQEFQLYY 454 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + + + ++ G+++P +F+P+ + L VLE + L Sbjct: 455 QPIISLKTHEIVSLEALIRWQHPQRGLISPQEFIPVAEETGLILAIGQWVLEESCQQLWQ 514 Query: 566 HPCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 SVNL Q ++ +I + +S + + LEITE N Sbjct: 515 WHQTLTEIPPLSISVNLSRKQFSQASLGKQIQSILSETGVSARHLKLEITETMIMENEVM 574 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 I QL G ++ IDDFGTGY++ L D +KID F++ +VT+T + IVR+ Sbjct: 575 VSELISQLRALGLQLQIDDFGTGYSSLSFLHNFPLDTLKIDRSFIEGLVTDTEKSEIVRT 634 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + LA ++ +AE VETQ Q L + +QGYL+ +P A Sbjct: 635 MITLAHNLGMTAIAEGVETQAQLQWLQQHHCDCVQGYLLSKPLSAA 680 >UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSS6_9CLOT Length = 916 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 98/573 (17%), Positives = 204/573 (35%), Gaps = 33/573 (5%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDF 238 ++ + ++ ++ + A +L+ ++ + Sbjct: 339 LFMFHDVTKIQEYTNNLKQLNEELSISDR----IISTAMEGILITDSSGNIIKVNNSFER 394 Query: 239 IAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 I+GY + +LN+ + T + Y + Sbjct: 395 ISGYKGEELIGKNPRVLKSGHHNKSFYLNMWNDLLTYGYWEGEIWNRKKNGELYPKWMSI 454 Query: 296 AVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---- 348 L + + + + + A D LT +PN + E Sbjct: 455 TCLKKQGGIIENYIAISTDITKIKKTEDKLQSLAYYDLLTGIPNRTLFYERLENALIRAN 514 Query: 349 ----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + +D + ++ G ++ + + + ++ + +L G E ++ Sbjct: 515 NNKGSVALLFMDLDGFKVINDSLGHAAGDLLLKEVAARIESSISRSDTVSRLGGDEFTVI 574 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + + + + +G ++ T++ L+ + Sbjct: 575 LENVNNHEDAKAAAESIIGKILLPYSILGREITLGVSIGIALSPYDESTVEGLVRKADAA 634 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-----NKEG 516 + + + + + + + + ALD + LY QP + Sbjct: 635 MYDAKESGKGK-YSFSSDEIERRNHEILEMQIKLNKALDNNEFNLYLQPQIIFAENEFKI 693 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G + ++ DG I TPDKF+P+ + +LE + + + + S Sbjct: 694 IGAEALIRWKTIDGKIFTPDKFIPVSETNRMIIPIGNWILEEIFRIDKVLKDNGINIKLS 753 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +N+ N+ +I LFK +++EITE + ES++ ++ ++ K G Sbjct: 754 INISSKQFENGNLVSKIKELFKENDSQNIDLVIEITESFLLQDTESAIQSLLEIKKLGIE 813 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I+IDDFGTG+++ L RL D +KID F+ DI+ +T + +I +AK +L VA Sbjct: 814 ISIDDFGTGFSSLSYLARLPVDYLKIDKSFIDDIL-STNHKNLTSNIISMAKTLNLKTVA 872 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L G LQGY +P + D Sbjct: 873 EGVETEEQANRLMDEGCDELQGYYFSKPLIIDD 905 >UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNH0_9PROT Length = 760 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 117/668 (17%), Positives = 241/668 (36%), Gaps = 35/668 (5%) Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 L + ++ + I + Y + L +++ K Sbjct: 89 LHALATSLIISVGIFVLLPENKPFYQAFLTMIVAGLSAGTVMSLSIYKDLARNYLIILLA 148 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 P I+ + + + L++LF +LI I+ + +L + Sbjct: 149 PFAIAMYKFGTEMHILMSLLITLFLMLLIT--FSKKHHEKIIELITSNMLVQDSEKELKL 206 Query: 210 KEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 E ++ + V ++ ++ + + + + L + P L Sbjct: 207 SESNFSSIFKEVPIGVFTYDKNLIITEANRSISELLNAPIHKLVNMDMKLLRDQSIRPQL 266 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNR 320 + T + + L E + + + L +V ++ Sbjct: 267 DATLSGER-GYYEGEYHNLISD-EEIWIKMQAVPMYDIDNQIKGGLGIVEDITGRIQADK 324 Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 + QA D LT L N L + + IDN + ++ G + Sbjct: 325 KIRQQAFYDHLTGLANRLTLNDRLEQQIARLARHNRFGAILFIDIDNFKTINDSLGHHIG 384 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET--------EGRLQHMVNILNSR 424 +++ + +M++ + + +L G E +++LS + ++ L Sbjct: 385 DTLLKTFAQRASSIMRKEDTVARLGGDEFVILLSDLSDNKNHALEYSHNVARKLHKLMKE 444 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 I L + +E + +L ++ E+ +S + Sbjct: 445 PIEVEEHSLYVTLSIGITTISEEEEDINVILKHADIAMYKAKQQGRNTT-CFFEQGMSKK 503 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 Q++L + +R AL LY QPI + + ++ G++ PD F+P Sbjct: 504 IEDQLILGSELREALKHNQFELYYQPIVETKSSIITSCEALIRWNHPTRGLIYPDDFIPY 563 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L V++ K S+N+ Q + +I++ + Y Sbjct: 564 AEESGLIISIGDWVIQRACIDYKKINHKIKN--ISINISSKQFNQDDFVTKILKATQEYS 621 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++P A+ LE+TE A N ++ + L GF IA+DDFGTGY++ LK L D +K Sbjct: 622 VNPSALKLELTESVALDNLLATTDKMNLLKSHGFTIAMDDFGTGYSSLSYLKNLPFDFLK 681 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F++ ++ N DA +V++I ++K V+AE VE ++ L L +Y QG+++ Sbjct: 682 IDRSFIQHVLDNEDDASLVKTILTISKQFKFEVIAEGVEEKEHVEFLKDLDCEYYQGFVV 741 Query: 722 GRPQPLAD 729 + P+ + Sbjct: 742 SKALPVNE 749 >UniRef50_A6CKI1 Sensory box/GGDEF family protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CKI1_9BACI Length = 778 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 127/748 (16%), Positives = 251/748 (33%), Gaps = 38/748 (5%) Query: 13 IFTLAFTLTVVLIQLSRFISPL---AIIHSSYIFLAWMPLCVMLSILFI------FGWRG 63 I +L F + L +S + + FL + V +I I F Sbjct: 13 IASLVFGAIIYFSYLYGNMSGIEANVGVLLGIGFLIFNTWAVNTTINTICLREISFFKLI 72 Query: 64 VVPVLCGMFCTNLWNFHLSFLQT-AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW 122 ++ + + + + + + + L T Sbjct: 73 FSSIIFASCISLVNMIDIWSEMVEHDLKMNILLFISANILLAGNVLATIRFIRQIRSLER 132 Query: 123 QRLFW---LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 FW + + + S I F IF V L + ++I Sbjct: 133 VGFFWILFGSFAIGMAFASIRFTLFSSITLFSTIDLFTNRNIPIFEWVYLNNTLLPLMIN 192 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPY 234 F + +V F++I + + ++R TL A+++ L +L Sbjct: 193 I--FALVFLELVPGLFSEIHSKEQQELIIENKRRYETLFDNQAVAIFTLDPKGKILKLNN 250 Query: 235 ENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + GY + L F + + + Sbjct: 251 AVQQLTGYPIDQLKKGSSFAELIHESKEDEFSSYIMEAVKGSSQMFETKISTSEGKYIDV 310 Query: 292 AFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA- 348 L + + + + + A D LT LPN + +Q Sbjct: 311 QITLIPIFVKEKLANINILAKDITEVIQTREQIQHLAYHDSLTGLPNRFQFVKELQQRIE 370 Query: 349 ----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + C L +D + ++ G + + ++E+ K+ ++ G E + Sbjct: 371 TSKLPAAVCFLDLDRFKVINDVLGHQTGDRLLLQLSERFTSFVKEDVKVARMGGDEFTFL 430 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + L++ + L L + + + +T++ L+ Sbjct: 431 FPEIPSMAELENKIEELMALIQTPFQIEKQELFVTGSMGISIYPNDSDTVEDLMKYADVA 490 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEG 518 +S + + +++K++ L IR A+ + + + QP + G Sbjct: 491 MYRSKEKGKN-TFEFYHQQNDEESSKKLALEKDIRKAMKEKEFEIVYQPQVKVSTGKIFG 549 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + +L G++TP+KF+ L + L VL + + + + SV Sbjct: 550 VEALLRWNHPAEGLITPNKFISLAEENGLIHELGEWVLRESCRQVNQWHNEGYSDLQLSV 609 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L +N + R+ S + LEITE A + E + QL G I Sbjct: 610 NISLKQLYHQNFISTVKRVIDEEGFSTSLLDLEITESMAMKDIEYAKLIFNQLRALGISI 669 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFGTGY++ +K D +KIDG F++D+ + A+I+++I + + +L +AE Sbjct: 670 SIDDFGTGYSSLNHIKNFPIDRVKIDGSFIRDVPGSAEAAIIIKTIIAMTRNLNLLSIAE 729 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQ 725 VET++Q L ++ +QGY P Sbjct: 730 HVETKEQYEFLQEINCDEIQGYYCSEPL 757 >UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31MH3_SYNE7 Length = 1238 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 114/617 (18%), Positives = 228/617 (36%), Gaps = 26/617 (4%) Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 I S + F + + D V+D + + + I + Sbjct: 614 IMASLSGAIANGFSTWSEQYRFLRQDGTYAH-VLDRGYIVRDENGRAIRAVGAMQDISAI 672 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII--- 250 A R E ++ A + ++ + I G+ Sbjct: 673 VAANEQLRL---WLRAIESTGNSIIIADAQQPDMPIIYVNPAFEKITGFSAAEVIGRNFR 729 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LY 307 F G+ + + A+ + + + LA + L + Sbjct: 730 FLQGLETQQAELEEMRRALEEGTYCEVTLRSYRKDGSLFWNQISLAPVRDQKGHLTHMVA 789 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDN 359 S+ QA D LT LPN +Q + + + +DN Sbjct: 790 SQTDVSESKAFEEMLLQQATHDALTGLPNRLLFLDRLDQAAARARGGGSPIAVLFIDLDN 849 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL---QH 416 + ++ + ++ L +QE+E + +L E +++L + + + Sbjct: 850 FKAINDGFSHSEGDAVLQIAAGRLQQCIQEHETVARLSSDEFVILLIDLDVQSKARVKAA 909 Query: 417 MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 M+ L ++ +++ F + ++ LL + L S Sbjct: 910 MIQSLMAKPFEVMGNPIELTASIGVATFPHDGQSGSELLQAADLAVCAAKQQGKNL-WCS 968 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIM 533 E + Q ++ + +R AL L LY QP + G++ ++ + G++ Sbjct: 969 FSEAMREQLRSRIDIEKDLRQALIDNSLELYFQPQVDLVTHRLLGFETLVRWNHPERGLV 1028 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGR 592 P +F+P+ + +L L V+ + L + S N+ +++NI + Sbjct: 1029 APGEFIPIAEESDLIDAIGLWVMRAAGLTLRRWIDHEGFTGSLSFNISARQFIRQNIFLK 1088 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + + I P + +E+TE + E + +++ GF++A+DDFGTGY++ L Sbjct: 1089 LFDVLQEFQIPPHQLEIELTESSLIESPERFVQWLQEARSMGFQVALDDFGTGYSSLGYL 1148 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KRL + +KID F++D+ + D IV++I +AK L +AE VE +Q A L +G Sbjct: 1149 KRLPINALKIDRSFIRDLPHDHDDQAIVQAIVAMAKVLKLRTIAEGVERLEQAAFLEAIG 1208 Query: 713 VQYLQGYLIGRPQPLAD 729 +QG+ G P P A+ Sbjct: 1209 CDAVQGFFYGPPLPEAE 1225 >UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1L5_DESAC Length = 1018 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 120/676 (17%), Positives = 226/676 (33%), Gaps = 45/676 (6%) Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY 141 F G + +I+ + G V Q F+ +P + Sbjct: 332 RFSDMIEHSGLVVIGIDHTSSIILFNQAAEKATGYAREDVLQENFFGLFTSPATAEHLGG 391 Query: 142 LVGSFFDFPLKISTFFGDA----DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 + F + + F R + A+ Sbjct: 392 YIAKAMAHGEFTGDFHAPLKMRDGRVRQFLWDAIFEYDENGQIDNFIGFGRDVTEALAAE 451 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFF---I 249 + + A ++++ C I+GY Sbjct: 452 RRLKLITK-----------VFENTAEAIIVTDRCNQIIEVNQAFISISGYSRGEVLGQNP 500 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLL 306 F + + + EY + + Sbjct: 501 RLLQSDHHDGAFFAQMWKQLIDTGHWEGEVWNRRKNGEEYVSWVTIDTIRDHDGSIKNFF 560 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-------KSFCCLRIDN 359 + + + R+ H A D LT LPN + Q E+ + L ++ Sbjct: 561 SISSDISQIKEAERQLHQLAYFDTLTGLPNRVSFAQKLEEHLTTCDEACNLAVMVLDLNA 620 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G ++ ++ L ++ + ++ G E +L + R++ +++ Sbjct: 621 FKLINESLGPVLADKLLQMFSERLTLCSYDDSFVARIGGDEFAFILR----KQRVRSLLD 676 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + + + ET+ LL + + Sbjct: 677 ELFECVEAPFVIGAQRVSLTTSVGIAVAPDDGETVSELLKNANIALYSIKDIRRN-SFSY 735 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIM 533 E+++S + +++ L +R A+D G+ LY QP N + G + +L G++ Sbjct: 736 YEQVMSDRVIERMSLAEMLREAVDNGEFELYYQPKINLKDGMVVGAEALLRW-HSRDGMV 794 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 PD+F+P+ Q L VL + + VNL P + + Sbjct: 795 PPDRFIPIAEQTGLILPIGEWVLLQACEQAHIWRQEYPEFHMGVNLSPAQFDLDYLPRLV 854 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + K + +A+ LEITE + ++++ + L G I+IDDFGTGY++ L Sbjct: 855 ADILKEAQLPAEALELEITEGMIIEDIDNTVQILRSLRDLGVEISIDDFGTGYSSLSYLT 914 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 RL DI+KID F+ ++ + +V SI LA++ +L V AE VET+ LLH Sbjct: 915 RLPLDILKIDRSFMFEVPDSRDSTNVVLSILALARSLNLKVTAEGVETEDHVTLLHDHRC 974 Query: 714 QYLQGYLIGRPQPLAD 729 Y+QGY RP P+A+ Sbjct: 975 TYIQGYFCSRPLPVAE 990 >UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=14 Tax=Rhizobium/Agrobacterium group RepID=B5ZWQ7_RHILW Length = 794 Score = 637 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 113/738 (15%), Positives = 244/738 (33%), Gaps = 46/738 (6%) Query: 4 EHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR- 62 ++ F + + P++ + ++ + + R Sbjct: 52 ASGFAFGTGVWATHFIAMLAYDGGT----PISYALDLTLLSFFLSVGGSWVAILAASQRE 107 Query: 63 GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW 122 G L + + + A + G + +++ Sbjct: 108 ARFSSTRGGALMALGIASMHLTGMQAIETQAVILYDSAMTLTAVVAG--MLLSSAAFHLF 165 Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 L + + + + + F I+ A+ T+V + A+++ Sbjct: 166 FNLKGMRRLLSASLVFVLAICTLHFMSMGSITLVPDPGKAVPTLVLDTRVLAAIVVVAAT 225 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 L + + F Q + ++ L ++ ++G+ Sbjct: 226 ALILVAL--AVVFVQSHLTDLRGLANASQEGLLILREG-------RIIDVNERFQALSGW 276 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--IS 300 + V LT + E ++ + + Sbjct: 277 KLADLSGKAPSDV---------LTAIQAPRENRPGETLLNTRTGREIAVDVNSSRIVYRG 327 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------F 352 +L + R + A D LT LPN + Q + Sbjct: 328 RDCEVLAV-RDLTERKQAEEMIEHLAHHDVLTDLPNRSLFDTRIRQALQVAERKNTEVAL 386 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 CL +D + ++ +G +R + L + E++ + +L G E ++ S + Sbjct: 387 FCLDLDRFKAVNDIFGHAEGDRILRKVAAILRRVAGESDTIARLGGDEFAIIQSDGQQPA 446 Query: 413 RLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 Q + + ++ +G + + T + L + Sbjct: 447 SAQKLAADIIDEFAAEMDTARDPTAVGVSLGIALYPRDGSTAEELCNNADTALYRVKHDG 506 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARL 526 A + + + + + +R A+ + L + QPI N + GY+ ++ Sbjct: 507 RGRA-CFFDAEMDEAARNRRQIESDLRHAIIRNQLHVSYQPILNAQSVEISGYEALMRWH 565 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + G+ PD F+P+ + + +L+ + A P +VN+ P+ + Sbjct: 566 RPGHGLTEPDIFIPVAEESGSIVQLGEWILQQACREAARWPQ---PLTIAVNVSPVQFML 622 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N+ R+ + ++P + LEITE + + M +++L K G I +DDFGTGY Sbjct: 623 PNLCERVEAVLDETGLAPDRLELEITEAALIRDRDRVMATLQRLRKLGVHIVMDDFGTGY 682 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+ D IK+D F + + IVR+I L + + VV E VET+ Q+ Sbjct: 683 SSLSNLRSFPFDKIKVDRSFTGVLEHDAAARSIVRAIIGLGHSLGMPVVTEGVETEMQRR 742 Query: 707 LLHKLGVQYLQGYLIGRP 724 ++ + G +QG L+G+P Sbjct: 743 IVVEEGCAQVQGLLLGKP 760 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 120/652 (18%), Positives = 222/652 (34%), Gaps = 43/652 (6%) Query: 112 WRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS 171 L L + + L G+ + I G D + + Sbjct: 46 ALAAFRRIQPEIVLLDLAMTQADAFELCASLHGARGGERVSILAVAGRGDLEGVRRAIDA 105 Query: 172 LFTAVLIYNMLFYYL-TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---- 226 T LI+ + L R+ AQ E+R L VL Sbjct: 106 GATDFLIHPVDVEMLGLRLSCGRRSAQTR-----ERLSRNEERNRGLIKGIPHLVLQISK 160 Query: 227 ---LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 +L P + D I + Y + V ++ ++ Sbjct: 161 EGTVLDFEAPRDFDLRQFPDGLRGRRIQDVFFADAPYVIVRCIERVIETAESQVLEHNVR 220 Query: 284 GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + + + ++R + + A DPLT L N ++ + Sbjct: 221 IGNDIHVYETRILP--NAEGEPTVVMRDVTERRKMEKELLQLAYHDPLTGLLNQHSMRER 278 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE---- 391 + + + ID+L+ ++ +G + ++ + +L + + Sbjct: 279 IARALELPGQHGRMTAILWVDIDHLKRVNATFGHELGDVLLQRVADRMLGCARRTDRKAR 338 Query: 392 --------KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAA 440 + ++ G + +++L+ ++ L S+ + + + Sbjct: 339 LGSDQSIKAVARMGGDDFVVLLTEISHVKGAANLAKRLLDDLSQPFVLDRHEVYVTASIG 398 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + LL + A + + L +R AL Sbjct: 399 IAVHPHDGAEAGTLLKNADSAMHHAKAEGRN-NFQFYTSSGKTAALRSLTLEGDLRMALA 457 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + +L + QP + E G + ++ G++ P F+PL + L +L Sbjct: 458 RRELFVEYQPEIDLKTGETVGLETLVRWDHPTLGLIPPLDFIPLAEETGLILPIGEWILS 517 Query: 558 SLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 A R +VNL Q+N+ I + + PQ + LEITE Sbjct: 518 IACMQNAIWHKSGLEPIRVAVNLSGHQFRQRNLIKTIAKTLTNSRLDPQHLELEITESTL 577 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 NA S+++ +++L G R+A+DDFGTGY++ L+R D++KID F++D+ N D Sbjct: 578 MENAASTIHTVKELKSMGVRLAVDDFGTGYSSLSYLRRFPLDVLKIDRSFIRDVTINADD 637 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A I R+I +A +L V+AE VE +QQ L + QGY RP A Sbjct: 638 AAITRAIIAMAHNLNLEVIAEGVENEQQLQFLQENNCDMAQGYYYCRPLTPA 689 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 116/562 (20%), Positives = 199/562 (35%), Gaps = 36/562 (6%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVG 256 + E R +L L++ + + + Sbjct: 280 LLQSELRLSEARFRSLCDLSSDWYWEQDAEHRFVHFNQGLNGLGIAVDEAVGRTRWELGA 339 Query: 257 K---LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVR 310 + + + ++ + S + R Sbjct: 340 PNLSAEDWAEHRRVLAARQPFRDLELQRTAADGRVSWVSVSGIPVFSADGAFLGYRGVGR 399 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEF 362 + ++ A DPLT LPN R A+ A + + + L +DN + Sbjct: 400 DITERKRVDAEIERLAFFDPLTGLPNRRLLTDRLRRAIGTAARERSHGALLFLDLDNFKD 459 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHM 417 ++ G M + + LL + + + G E +++ G + Sbjct: 460 LNDTLGHDMGDRLLVQAAQRLLACAGAGDTVSRFGGDEFVVLAEGLPGDMHRARADAAVL 519 Query: 418 VNIL---NSRQIHWNNT-GLDMGYGAAWGRFDGNQETLQP---LLGQLSWLAEQSCAHHH 470 N + R F G LL Q+ A Sbjct: 520 ANRITAALGRPYAVGGMGHHHSTPSIGLALFGGGTGDGAGVDDLLKHADLAMYQAKAAGR 579 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKY 528 + + + + L + +R AL+ +LLL+ QP+ + G + ++ Sbjct: 580 N-TIRFFDPSMLQAVLARAALESELRLALESDELLLHYQPLVNGDGSMLGAEALVRWRHP 638 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQ 586 G++ P +F+P Q L VLE L +VN+ Q Sbjct: 639 QRGLVMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWSRSAATAQLVLAVNVSVRQFRQ 698 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + ++++ +R P+ + +E+TE ++ E + +EQL G AIDDFGTGY Sbjct: 699 PDFVDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGTGY 758 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKRL D +KID FV+D++T+ DA IVR+I LA++ L VVAE VET Q Sbjct: 759 SSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQLK 818 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L + G + QG+L GRP P A Sbjct: 819 FLQRHGCKAFQGHLFGRPAPAA 840 >UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=45 Tax=Rhizobiales RepID=C6AVD3_RHILS Length = 717 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 100/571 (17%), Positives = 197/571 (34%), Gaps = 34/571 (5%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 I++ + ++ + V + + + Sbjct: 136 RAAILAIVQDRSEVNAARRQMSDTRSLLDSIVDNLPVGVFVKDMEADGLYVLFNEACGDI 195 Query: 247 FFIIFTLGVGKLRYPF----------LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 + VG+ A +++ + + L + Sbjct: 196 VGMRAEHVVGRTDRSLFPPSQTDAFREQDRRAFEANAAISFEETMQRADGVPRILRTVKR 255 Query: 297 VLISFSVC----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE----- 347 L + LL + + + + A DPLT LPN A + Q Sbjct: 256 ALPTPEGHAPRYLLGISQDVTEERAVEAKLAHLATRDPLTGLPNRAAFSEHINQRAVEAT 315 Query: 348 --AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + + +D+ + ++ G + + LL L E + + +L G E +VL Sbjct: 316 ADSAIALLYIDVDHFKHINDSKGHAAGDALLCQVSERLLQLAGEGDLVARLGGDEFAVVL 375 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + R L S + + + L+ Sbjct: 376 E-LDEPERAGRFAQRLLQTLSHAFDLDGAREHVTCSVGIALAPDHAGDADVLMRHADLAL 434 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR----NKEGEG 518 + E + ++ ++ + AL++ L+ QPI + G Sbjct: 435 YAAKESGR-SIYRFYETEMRLAAQRRHVMTAELWEALEKRQFELHYQPIVQLDNDG-IGG 492 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 ++ ++ + G++ P +F+PL + L V+ + P R +VN Sbjct: 493 FEALIRWRHPERGLVAPMEFIPLAEETGLIVPIGDWVIREACRAAGGWP---VHLRIAVN 549 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L ++ ++ ++ + +EITE ++A+ S+ + L G RIA Sbjct: 550 LSVSQFRHASLLSTVVAALDETGLTADRLEIEITESVFLTDADQSLPRLRALKALGVRIA 609 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ L+ D IK+D FV I T+ + IVR++ + + + +AE Sbjct: 610 IDDFGTGYSSLSYLRSFPFDKIKLDRSFVSGIETDAGNLAIVRAVVGIGSGFNATTLAEG 669 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +ET++Q L G +QGYL+GRP P + Sbjct: 670 IETEEQLQKLRAEGFSEVQGYLLGRPMPQHE 700 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 113/631 (17%), Positives = 206/631 (32%), Gaps = 73/631 (11%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 ++ + + ++R I A+ L K L+ Sbjct: 138 RWLMTSKVPLRSKSGKIIGIVGISRDITDRKSAERLLEGQARLLEMIAKG-KPLTEFFNE 196 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL--------CLL 275 VLL+ P I ++ R + A+ Sbjct: 197 LVLLIEALLPGIKGSILLLSEDGRHLLHGAAPSLDRA-YSAAVHALEIGPNAGSCGTAAW 255 Query: 276 NYNQNFLQ---------------GVETEYSLAFILAVLISFSVCLLYMVRIYH------- 313 Q + S ++S +L +Y Sbjct: 256 RGEQVIVSDVYADPLWADYALLLKSSGLRSCWST--PILSRERKVLGTFALYAHEVATPC 313 Query: 314 ------------------RSEWLNRRWHLQALTDPLTLLPNFRALEQA-------PEQEA 348 + R A D LT LPN E+ + Sbjct: 314 EQEQELIAMAAHLAGIAIERKRAEDRISFLAHHDALTGLPNRVLFEEQVDGMLEEIRERD 373 Query: 349 GKSFC-CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +DN + ++ G ++++ + +++ + + ++ G E +++L+G Sbjct: 374 QCAVLAFLDLDNFKLINDSLGHAAGDELLKAVAGRMRASVRKADFVVRVGGDEFIILLNG 433 Query: 408 PETEGRLQHMVNIL------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 E + +++ L + + L + F T LL Sbjct: 434 LPKERDI--VLSRLEDIRSAIAMPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANADMA 491 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 ++ + E ++ + +++ +R AL + LL+ QP N Sbjct: 492 MYRAKELGRD-NIQVFTEEMAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFA 550 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSV 577 + +L GI++P F+PL + L L + + L SV Sbjct: 551 AEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISV 610 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ ++N A R+ + K + + + LE+TE + ++ + L G + Sbjct: 611 NVSARQFRERNWASRVAEILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHL 670 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTGY++ LKR +KID FV DI + D I +I LA+ L V+AE Sbjct: 671 AIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAE 730 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VE++ Q L K G +QGY RP Sbjct: 731 GVESEAQVEFLQKAGCDEIQGYFFSRPLSAE 761 >UniRef50_C1I4R6 Diguanylate cyclase/phosphodiesterase domain 2 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4R6_9CLOT Length = 960 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 99/577 (17%), Positives = 197/577 (34%), Gaps = 30/577 (5%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYE 235 + L + + E+R A + + Sbjct: 378 RNYDELNVVYEELAATEESLEMQYNEVQASEERYKLAVDGANDIIWEYDFRNKEHYLSNK 437 Query: 236 NDFIAGY----LVPVFFIIFTLGVGKLRYPFLNLTWA--VSTLCLLNYNQNFLQGVETEY 289 + + GY + + + + L+L + Sbjct: 438 FEGLLGYTIYNSENLIDTFKKIILKEDLGKVLSLFEEHLNRKSSYFYVECRVVDRFNNIK 497 Query: 290 SLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + LI + + + + A D LT LPN + Sbjct: 498 WVFIRGKALIDSENNPVKISGSISDITERKKAEEKIETLAFYDQLTGLPNKHMFLDKIDD 557 Query: 347 EAGKSF--------CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 E + + IDN + ++ G ++ I + + L+ +E + +L G Sbjct: 558 ELLRGLKNEYIGVAFLIDIDNFKNINDTLGHDYGDEFLKCIAKEFIKLLDNDEFICKLDG 617 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E L+++ + + M N + + + LL Sbjct: 618 DEFLILMLDVNGKAEAEEMANKILELFKNPFKVKEKNIFTSVSIGISIIPNDARNKSELL 677 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 ++ + E ++ ++ L++ +R A+ + + L QP Sbjct: 678 KNSDIAMYKAKENGKNR-YLFYRESMAKDIVRKSQLIDGLRNAICKSEFELLYQPQINMN 736 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK- 571 + + G + +L G ++P +F+PL Q L VL++ Sbjct: 737 DSKVIGAEALLRWRSNSFGNVSPIEFIPLAEQSELIISIGKWVLKNACIKNKEWIDKGIT 796 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VN+ + L Q N + + + + + +EITE +N E ++ + + Sbjct: 797 PMTIAVNVSVIQLYQSNFLNTVRDILDESGLPAEYLEIEITESIVMNNIEENLKVLNDIK 856 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G +IA+DDFGTGY++ L+ L D +K+D F+ +I + D +IV I LA + Sbjct: 857 DLGVKIALDDFGTGYSSLSYLRLLPIDKLKLDKSFIDNIHISENDRVIVECIIKLAHEMN 916 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VVAE VE ++Q +L+K+G +QGY +P Sbjct: 917 ILVVAEGVEIKEQFDILYKMGCDRIQGYYFSKPISPD 953 >UniRef50_Q21WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WZ5_RHOFD Length = 1353 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 115/654 (17%), Positives = 214/654 (32%), Gaps = 27/654 (4%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM---YLVGSFFDFPLKISTFF 157 AIL + + ++ LV + + V + + + Sbjct: 670 AAILVHRELRIIYLNPAAIAMFGARTAQELVGKALLDLIHPDSHQVATARVRHITNTGHA 729 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 + + + + Y I + + Sbjct: 730 APLIDEKYLRLDGTPIDVEVQSTSIIYEGLAAIRTAFRDISERKLAHDKLQLAANVFSHA 789 Query: 218 SWLAALSVL-LLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLC 273 A++ ++ I GY + + + + + Sbjct: 790 REGIAITDARATIIDVNEAFCRITGYSRDEVLGQNPRVLGSGRQDKAFYAAMWHDLGEQG 849 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + Y ++ + + + + A D Sbjct: 850 HWYGEIWNRRKNGELYPEMLTISAVRTDQGQVQNYVALFSDISAIKAHQHELEHIAHFDA 909 Query: 331 LTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L +Q + L +D + ++ +G + ++ Sbjct: 910 LTNLPNRVLLADRLQQAMAQAQRRGQMLALAYLDLDGFKAINDRHGHEAGDLLLMTVATR 969 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGA 439 + ++E + L ++ G E + VL M++ L + + + L + Sbjct: 970 MKQTLREGDTLARIGGDEFVAVLLDLSDSKASAPMLSRLLAAAAEPVRLGDLALQVSASL 1029 Query: 440 AWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + ++ LL Q Q+ + L IR A Sbjct: 1030 GVTFYPQVDEMEADQLLRQADQAMYQAKLAGKNR-YHFFDAAQDRSARGHHESLERIRQA 1088 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 LD+ + +LY QP N G + ++ + G++ P FLP+I L+ V Sbjct: 1089 LDRREFVLYYQPKVNMRTGAVIGAEALIRWQHPEKGLLAPALFLPVIEDHPLAVDIGEWV 1148 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEE 614 + + L D SVN+ L Q + R+ L + P + +E+ E Sbjct: 1149 IATALIQNELWQADGLDMPISVNVGARQLQQADFVPRLRELLAAQPGVKPFQLEIEVLET 1208 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 A + +IE+ + G A+DDFGTGY++ LKRLQ D++KID FV+D++ + Sbjct: 1209 SALEDWVGVSQSIEECREMGVLFALDDFGTGYSSLTYLKRLQVDLLKIDQSFVRDMLDDP 1268 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D I++ + LA A +V+AE VET LL +LG QG+ I RP P Sbjct: 1269 DDMAILQGVIGLAGAFRRNVIAEGVETIAHGTLLLQLGCDLGQGFGIARPMPAD 1322 Score = 55.7 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 31/304 (10%), Positives = 74/304 (24%), Gaps = 34/304 (11%) Query: 42 IFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT--------AVMLGSQ 93 + + PL ++L L + +LC + + HL A + G + Sbjct: 497 LLASGEPLPLILEALVRGVEQLNPTMLCSILLLSGDGQHLGQGVAPSLPDFYNAAIDGIE 556 Query: 94 TFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKI 153 +C + + + WQR L +G S ++ S Sbjct: 557 IGAGAGSCGTSAFTAERVIVSDIATHVYWQRYKELAARADLGACWSQPILSSLGQVLGTF 616 Query: 154 STFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR 213 +++ + I + E+R Sbjct: 617 ASYHHTTHTPTSAE----------------IASVERFARIAAIVIEGQAAAKKMRDSEER 660 Query: 214 AFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 TL + ++L+ + P L + + Sbjct: 661 FRTLIEESPAAILVHRELRIIYLNPAAIAMFGARTAQELVGKALLDLIHPDSHQVATARV 720 Query: 269 VSTLCLLN----YNQNFLQGVETEYSLAF-ILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + ++ +L+ T + +++ + R + + + Sbjct: 721 RHITNTGHAAPLIDEKYLRLDGTPIDVEVQSTSIIYEGLAAIRTAFRDISERKLAHDKLQ 780 Query: 324 LQAL 327 L A Sbjct: 781 LAAN 784 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/228 (7%), Positives = 55/228 (24%), Gaps = 17/228 (7%) Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF 157 A QR L V + +++ +++ Sbjct: 265 GITLADWYVAAALPTAEAFAPIDAMQRRIVLATVL----LTLLAGGLTWWMLRRQLAPLL 320 Query: 158 GDADAIFTVVDLLSLFTAVLIYNML-----FYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 A+ + + + A+ + + ++ H + L ++ + S Sbjct: 321 ATAETLVALPTAQTFPIALPVAHPDEIGHLIDGFNHLLAHLHQRETLLKQILDTSSAAIF 380 Query: 213 RAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 + + + + + + I V + + L + + Sbjct: 381 VIDSQGRITQANQRMAEMFGCPLDTLIGHDYVSLVHPAERNVGQQNMLALL-----ANKV 435 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEW 317 + + + + E+E+ S + ++ Sbjct: 436 SSSDLERLYWRADESEFWGHLACRGFHDASTHQHCFVGVITDITERIQ 483 >UniRef50_Q0A8D0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8D0_ALHEH Length = 1017 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 103/581 (17%), Positives = 213/581 (36%), Gaps = 25/581 (4%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 ++S A F + I A+ R + ++ Sbjct: 412 VISPLRAADGTITHFVAVREDITESKRAESAIRLRERALESTANGILISDLRLRDNPIV- 470 Query: 229 LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + I GY F + K + + A+ + + + Sbjct: 471 --YVNPAFERITGYPRDEVVGRNGRFLVRDDKDQPGLEEIRSALRSRREAHAVIRNYRKD 528 Query: 286 ETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 T + +A + ++ ++ + + D LT LPN L Sbjct: 529 GTLFWNELFVAPVREDDGAVHYMVSVINDVTERKRYQAELEQRTHYDALTGLPNRNLLVD 588 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + +D + ++ G +R++ L ++ + + Sbjct: 589 RLHQALLYARRSGRHVALLNVDLDRFQIINESLGHAAGDQLLRTVADRLTAALRGFDTVA 648 Query: 395 QLPGSELLLVLSGPETEGRLQHMV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E +VL+ + + + I + + + F + + Sbjct: 649 RMGGDEFNIVLTELRNTRDAELLAGELQEALAPSISVTGQDVFLSVSVGYTVFPDDGDGP 708 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L+ + S ++ + + E + ++ L + ++ A+++G+L L+ QP Sbjct: 709 EDLIRRASVAMHEAKRQGGGVIIR-YSERSEPRQINRLTLESDLQRAIERGELRLHLQPQ 767 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L G+++P +F+PL + L VLE++ LA Sbjct: 768 VDLDTGAMSGAEALLRWEHPRHGLVSPMQFIPLAEEVGLIIPMGRWVLETVATQLAHWQQ 827 Query: 569 DKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 ++N+ L + + ++ + + ++P + LE+TE N E ++ + Sbjct: 828 QGLPVVPVALNISARQFLHAELVEDVRQILEGHGVAPSLLELELTESLMARNPEVAVQIL 887 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G R+A+DDFGTGY++ LKR D +KID FV+ + + DA I+ + +A Sbjct: 888 RELKAMGLRLALDDFGTGYSSLAHLKRFPIDTLKIDQSFVRHVNEDGDDAAIINATIRMA 947 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L+VVAE VE + Q L + Y QGY RP L Sbjct: 948 HSLGLNVVAEGVEREDQLEHLKRQRCDYAQGYFFSRPLSLE 988 >UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXT2_DESAC Length = 868 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 109/600 (18%), Positives = 219/600 (36%), Gaps = 33/600 (5%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 A + L + LI + +I + Q+ + ++R L Sbjct: 258 QAMSRPPAPVLPRQWLRALISGAVLLLFLLIITALLRWQVRRK--TEELRRFKQRFEYLQ 315 Query: 219 WLAALSVLLLLLCTPYEND---------FIAGYLVPVFFIIFTLGVGKLRYPFLNL---T 266 + + + L L T + + G+ + L Sbjct: 316 KASPVVLFNLALPTGRAPEVLWVSDNITRLFGFTPEQTYQPGWWQSIIHPGDLQQLEANM 375 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 ++ + + T + L L + + ++ S + Sbjct: 376 RSMPKIGHGSVEYRLYDNDGTLRYVREELQFLPATATSPAQVVGSWNDITTSREQQDQLS 435 Query: 324 LQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHC 375 DPLT LPN L + + L +D+ + ++ +G Sbjct: 436 FLTHYDPLTQLPNRTLLHLQLQDALAHIETGQDQLAILNLDLDHFKKINETFGFDFGDKI 495 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTG 432 +R L L++ + + ++ E ++++ G + + R ++ + Sbjct: 496 LRQTAGRLKHLLRLEDSIARMGADEFVIIIQGENIAELASSISRRILHRLGTPLNIEDQE 555 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L + F + + LL + L +S + +++ Sbjct: 556 LIVTTSVGISLFPEDGADPETLLKNAEIARYAAKRQGRNR-LHFFSSQLSDNVRENLVME 614 Query: 493 NTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 + +R A+++ +L+L+ QP + + G + ++ + + G++ P F+PL + L Sbjct: 615 SALRNAIERKELVLHYQPQLDLNSGDLVGVEALVRWQRPEIGLVPPGLFIPLAEEIGLIN 674 Query: 550 RFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 L VLE + R +VNL + ++ +++++ + + Q + Sbjct: 675 DIGLWVLEEACRQTIDWDRQGYHVPRMAVNLAVQQIESGHLPQQVLQILQYTGLPAQRLE 734 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LE+TE + + + + G R+AIDDFGTGY++ LKRL D +KID FV Sbjct: 735 LEVTESAIMIEPKKAADALLEFQSMGIRLAIDDFGTGYSSLAYLKRLPLDRLKIDRSFVM 794 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DI TN D +I R+I +L+ + + VAE +E Q L + G + QGYL +P P Sbjct: 795 DIGTNAGDDIISRAIINLSNSLGMDTVAEGIENTDQLEFLRREGCEIGQGYLFSKPLPAD 854 >UniRef50_A6EZP7 Two-component response regulator n=4 Tax=Marinobacter RepID=A6EZP7_9ALTE Length = 858 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 107/592 (18%), Positives = 209/592 (35%), Gaps = 28/592 (4%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 A +++ + + + Y L R I + Sbjct: 259 AFGHPYFLEVTNFPVIIQGEIVGVYGLCRDISDRKHQDADLHLLKRGIEANPNGMLMVDA 318 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLN 276 + ++ + GY F G + + +N Sbjct: 319 RSPDMPVV---YANPAFTEMTGYSYDEVMGSNCRFLQGEETALEALETIRQGLHHQTEVN 375 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + T + ++ + + + + QA D LT Sbjct: 376 VELINYRKDGTPFWNHLRISPVFGNDGLCTHFIGTQQDVTHQREQEAQITYQATHDLLTG 435 Query: 334 LPNFRALEQAPEQEA-------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 LPN + ++ + L +D + ++ G + + +I R L L Sbjct: 436 LPNGVSFQETLHDALILDGGRGALAVLYLDLDGFKPINDELGHHVGNQVLITIARRLADL 495 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 + +L G E L+L G + + + ++ I + + + Sbjct: 496 TAPEATVARLVGDEFGLLLPGYTNRKEVTQLAERILVHLAKPIDVDGQMVHISASIGIAC 555 Query: 444 --FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + LL E++ + + ++ V L + + TAL++ Sbjct: 556 NSAPLDA--PHELLQFADIARERAKRQGKN-TWQWHSGLKAERSQHSVKLRHDLHTALNE 612 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 ++ QP+ + + ++ G+++P +F+PL Q L +L+ Sbjct: 613 NQFEIHYQPLVDAVTGRMRSVEALVRWKHPTRGMISPGEFIPLAEQTGQIIPLGLWILKQ 672 Query: 559 LLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 +A + +G R +VN+ L ++ + R+ + PQ + LE+TE Sbjct: 673 ACIEIADFNAQRERGLRVAVNISSLQFIRGGFLDDVRRVLAETGLPPQLLELEVTESVLL 732 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 AE + +E L G R+A+DDFGTG+++ L+ L +K+D FV+ T+ A Sbjct: 733 DGAEPVIELMETLKTLGVRVALDDFGTGFSSLSYLRDLPTHKVKLDRSFVEKTTTDHRIA 792 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV+ + +A + VVAE +ET++QQ L + LQGYL +P PLAD Sbjct: 793 AIVQGVITMAHHMDMIVVAEGIETREQQDDLARRHCDILQGYLFAQPMPLAD 844 >UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAA4_KANKD Length = 1128 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 103/544 (18%), Positives = 199/544 (36%), Gaps = 28/544 (5%) Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFF---IIFTLGVGKLR 259 +R T VL+ G+ I Sbjct: 567 DATIRRLSTGIDQNPYPVLITDTDGNIQYVNKAFIETTGFSETEAIGKNPIEFSAEQDPD 626 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSE 316 F + ++ + + Y+ ++ + + + + Sbjct: 627 KTFKMIWRQLARGDAWRGELVSRRKDGSHYTEFAMIYPVRNNKGKIINYVAHKEDITLKK 686 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYG 368 + H + D LT L LE+ +Q + + L +DN + ++ G Sbjct: 687 IAEEKIHQLSNYDQLTGLLKREMLEERLQQLLDDSFKQKQAMTVMWLDLDNFKTINDSLG 746 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 + + + L + + + ++ G VL E + + RQ Sbjct: 747 HQVGDLILIEVANRLRFELGKQSIISRIAGDTFAAVLP-LTNEHSAALIAKNVLEVVQRQ 805 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 I +N+ L + + ++ L+ ++ + + + Sbjct: 806 IKFNSHILSISPSIGLAISPNDGQSADKLIMCAETAMYRAKHDGRN-TFRFFAQEMQEHS 864 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 + + L ++ AL L QP + G + +L + G ++P +F+PL Sbjct: 865 LRSLQLSIALKEALTNDQFHLVYQPQMSLSNNSMVGAEALLRWEHPEWGTVSPAEFIPLA 924 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 Q L + V++ + + + +VNL L Q ++ I L ++ Sbjct: 925 EQSGLIVQIGEWVIQQVAQQQKSWLERGLPEVIIAVNLSALQFHQPDLVETITSLVRKAG 984 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + +E+TE A + E + I+ L + GF+++IDDFGTGY++ LK+ +K Sbjct: 985 VVPENIEVELTEAVALKDPEVAGTTIDALSRAGFKVSIDDFGTGYSSMSYLKKFAVHKLK 1044 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+KDIVT+ D IV +I +A + + +AE VETQ+Q L K G + +QGY Sbjct: 1045 IDQSFIKDIVTDIDDQAIVTAIIQMAHSLHKTTIAEGVETQEQLDFLRKKGCEEMQGYWY 1104 Query: 722 GRPQ 725 RP Sbjct: 1105 SRPL 1108 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/324 (8%), Positives = 74/324 (22%), Gaps = 20/324 (6%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN 78 L V L+ L+ IS + + L+ F + ++ + Sbjct: 85 ALGVALLDLTHTISYQGMPDFVTPSGPEKAINFWLAARFTIAFAILLVATITLNFERKLA 144 Query: 79 FHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC 138 + A+ L + L + Y ++ L+ + + Sbjct: 145 KLSRYFWLALTLMTVGL---FHFWFLYFPDSVPDTYSNVEGLTQFKVISEYLLIGLYLVA 201 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL------------IYNMLFYYL 186 + + + + + A + + A + I+ F Y Sbjct: 202 AFLFINQLNNIREFGANWLVAAAITMAMSEFFFTLYANVSDLYNLIGHIYKIFAFSFLYR 261 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 + + + + + L + A L + E + Sbjct: 262 ALFVEAIQSPFMKMSQLQSKLSATLNALPDLLIEVDAKGNYLDIHSANPELLLRREEKLI 321 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFS 302 I + + + A + ++ + Sbjct: 322 GSNIKEIMDKENAKRCMQAIETAGQIGRSQGTRIELQVPSG-VRTFELSISRKKGHLDQP 380 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQA 326 L + R + + + +A Sbjct: 381 STFLILSRDITSTINIEQHIAHEA 404 >UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V069_9PROT Length = 734 Score = 636 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 100/578 (17%), Positives = 197/578 (34%), Gaps = 30/578 (5%) Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 LI ++ + + + + ++ + Sbjct: 153 SLIKIVMLDMGLALDTYMQTDRDTILGLKRYAEDIIASLPAGLIVVNDTLKV--RSVNRS 210 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + G L + P LNL + + E L + Sbjct: 211 FREMFGLKNGEDVSGREL---EDILPLLNLHQQAQVVLTSGIALRGIDAALGEKWLRLTI 267 Query: 296 AVLISFSVC----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 + LL +V + + A D LT LPN L Sbjct: 268 TGIRLAEEEEEEDLLVIVEDITKLKAQAVHIEQLAFYDSLTGLPNRSLLRDRVQRVLAHS 327 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + + +DN + ++ G + + + + L ++ ++ + ++ G E ++ Sbjct: 328 ARHKNHGAILFIDLDNFKALNDTKGHNIGDLLLIEVAKRLQDCVRNSDTVARMGGDEFVV 387 Query: 404 VLSGP-ETEGRLQHMVNIL-------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 VL E + + +R + F N+ + + Sbjct: 388 VLEELNEDTQQAVAQAQDIGETVLASLNRPFNLQGFEHYSSASIGISLFRDNEIGMDDVF 447 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q+ L + + + +L +R AL L+ Q N Sbjct: 448 KHADTAMYQAKTSGRN-TLRFFDPDMQASLEARAVLEIDLRHALSLQQFKLFFQIQMNAA 506 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-- 571 + G + +L L G+++P F+ L L VLE+ + + Sbjct: 507 NQPIGAEALLRWLHPKRGLVSPLDFISLAEDTGLILPIGQWVLETACTQIKAWEANPLAC 566 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 + +VN+ Q + ++ ++ P + LE+TE +N ++ + L Sbjct: 567 ELQLAVNVSARQFHQPDFVEQVRAALEKTGADPARLKLELTESVVLNNINDAVIKMSDLK 626 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G R ++DDFGTGY++ L +L D +KID FV +I DA+IV++I + + Sbjct: 627 EVGVRFSMDDFGTGYSSLSYLTQLPLDQLKIDLSFVYNIGIKPTDAVIVQTIISMGNSLG 686 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET+ Q+ L + G QGYL +P + + Sbjct: 687 MEVIAEGVETEAQRDFLERNGCHAYQGYLFSKPVSIGE 724 >UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNV7_THASP Length = 884 Score = 636 bits (1641), Expect = 0.0, Method: Composition-based stats. Identities = 113/723 (15%), Positives = 232/723 (32%), Gaps = 47/723 (6%) Query: 47 MPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCAC-AILR 105 + + + + +F R P F + L + + Sbjct: 153 LHGRISNTWIVVFSRRYNAPDGDFAGVVTAAVPADHFQRLLSGLQLGPHGIALVRDLDMT 212 Query: 106 WQLGTRWRYGLTSRYVWQR-------LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 + + + + + ++ Sbjct: 213 LIARWPRLDAPAGVIGSRGGSQELNEIVASDVRAQSFYSARTADGVARINAYRRLERLPA 272 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 + D L+ + + ML + L + R + + +R+ L Sbjct: 273 FVVVGWGEKDYLAQWKEDVGKAMLLWALFLGVTGLAAWL--LYRLVDANDRANERSRILL 330 Query: 219 WLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGV---GKLRYPFLNLTWAVS 270 A+ + + + G + ++ + Sbjct: 331 QNASDGIHITDAEGIVIEASDAFCRMLGRSRSEVIGMRAGSWDACHPEPDMRALISELFA 390 Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + + + + + Y + L L R + A D Sbjct: 391 SSEVHTFETAHRRKDGSVYPVEVTAFPLEVDGRTVLFNSARDISARKSAEAEVRKLAYFD 450 Query: 330 PLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN R L + Q + + +DN + ++ G + + Sbjct: 451 ALTGLPNRRLLMERLERAQASCARQGTVGALLFIDLDNFKAVNDTVGHQEGDRLLVQVAA 510 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGL 433 L+ +++++ + +L G E +++L E + + + + + ++ ++ Sbjct: 511 ILVRCVRKDDTVARLGGDEFIVMLEELGGEGREAAEQAAAVGSKILAALNQRFQLGSSEH 570 Query: 434 DMGYGAAWGRFDGNQETL-QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 F + L + ++ A+ + + + + Sbjct: 571 RTSVSIGVSLFGELADEPVDEPLRRADMAMYRAKLGGRN-AVCFFDPSMLADVRARADVE 629 Query: 493 NTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 + AL+Q +L+ QP + G + ++ G++ P +F+PL + L Sbjct: 630 AGLWIALEQRQFVLHYQPQVAADGAVLGVEALVRWHHPVRGLVPPGEFIPLAEECGLILP 689 Query: 551 FDLQVLESLLKWLAT-----HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 VLE+ LA +VN+ L ++ ++ +R P Sbjct: 690 LGRWVLEAACAQLAAWADDPWRSR---LVIAVNVSARQFLHEDFVAGVVAALERSGADPG 746 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE ++ + +E L G ++DDFGTGY++ LKRL D +KID Sbjct: 747 RLDLELTESSLVTDVDKVSEKMEALKALGVGFSLDDFGTGYSSLAYLKRLPLDQLKIDRS 806 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+DI+ + DA I R I LA L V+AE VE ++Q+ L + G QGYL PQ Sbjct: 807 FVRDILVDPNDAAIARMIIVLADNLGLRVIAEGVECEEQRDFLARNGCSSYQGYLFSAPQ 866 Query: 726 PLA 728 P+ Sbjct: 867 PID 869 >UniRef50_A3JAM8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAM8_9ALTE Length = 756 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 112/569 (19%), Positives = 221/569 (38%), Gaps = 34/569 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGYLVPVFF 248 HF S + K+ + V+ ++ + I Y Sbjct: 179 HFDINDRITAQRKSNEQSKQMHAIVESMQDGVVTISNKGVIRTFNRGAECIFEYGRDEAI 238 Query: 249 IIFTLGV-----GKLRYPFLN--LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-S 300 + + +++ ++ + + + T + + + + Sbjct: 239 GLDVNVLINTPNRDYLNKYISNYISRNTGNAIQRYHELDAINKYGTVFPIEIGMTQMPPL 298 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 + + +VR + + A DPLT LPN R L+ Q + Sbjct: 299 GDIDFVVIVRDITQRKKREDEIRQLAYYDPLTRLPNRRLLKDRLQQVIANCGRQSRYAAL 358 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +DN + ++ G + + L+ ++ + + +L G E ++++ G ++ Sbjct: 359 FFLDLDNFKNLNDSLGRTKGDLLLCQVAARLIESVRHGDTVSRLGGDEFVVLIEGLSSDR 418 Query: 413 RLQHMVN-----IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + +++ + + + F+ N +L+ LL Q + Sbjct: 419 NEAAVQVEAAAGKINVQLTQKFDLDGSPYNGSASIGVTTFNSNDSSLEDLLKQADMALYK 478 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEI 522 + A H ++ + + + + + + AL + L+ Q ++ G + + Sbjct: 479 AKAADH-SSVHFFDPQMQVVASLRAAMQQDLYEALRKNQFQLHYQKQIDQHEGLIGVEAL 537 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLM 580 L G ++P +F+PL + L VL + LA K +VN+ Sbjct: 538 LRWAHPTKGFISPAQFIPLAEETGLIVPIGEWVLREACQTLAQWASDPAKANLTIAVNIS 597 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + +K+I ++ P + LEITE S+ E+ + +L + G +ID Sbjct: 598 VVQFNKKDIVHTVLNALNASGAKPHNLKLEITESLLASDVENVKVKMLELQRHGVTFSID 657 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK+L +KID FV+DI+ + D I +++ LA A L+V+AE VE Sbjct: 658 DFGTGYSSLFYLKQLPLHQLKIDQSFVRDIINSPNDQAIAQAVITLAIAMHLNVIAEGVE 717 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ Q+A+L LG QGYL G+P L D Sbjct: 718 TEAQRAMLQDLGCGAYQGYLFGKPCALQD 746 Score = 44.2 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 11/146 (7%), Positives = 32/146 (21%), Gaps = 16/146 (10%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPV 246 + +RD E+ ++ + L L + + GY + Sbjct: 46 AIETDITKEKRDADLISYNEEMLKSVINANNIGTWRLNLQSGELTINEKWAHLLGYKLHE 105 Query: 247 FFIIFTLGVGKLRYPFLNLT-------WAVSTLCLLNYNQNFLQGVETEYSL----AFIL 295 L +P ++ + + + + Sbjct: 106 LMPTDRKTWENLTHPEDLAYCISELEKHSMGQVPAYEADIRMKHKNGEWVWINTRGQVLS 165 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRR 321 + + L+ + R+ Sbjct: 166 STEDGKTEWLIGTHFDINDRITAQRK 191 >UniRef50_C6WW34 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW34_METML Length = 623 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 97/532 (18%), Positives = 199/532 (37%), Gaps = 25/532 (4%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 V P + F + L L V+ + N Sbjct: 76 IPFIVYTATYTEPEDEKLALSLGADAFILKPCEPEDFLARFIDVLVKGVAASPDIASEVN 135 Query: 281 FLQGVETEYSLAFILAVLISFSVCL----LYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + ++ L ++ L ++ + R + + A D LT LPN Sbjct: 136 SGHSDTLKDYSVILIRKLEEKTLQLEEANQFLQQDIARRKEAEDKIQHLAYYDLLTNLPN 195 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L + + + +D+ + ++ G + + + + L M+ Sbjct: 196 RLLLIDRLQHTLAMSARHQNHGALLFIDLDHFKTLNDTKGHSVGDLLLVEVAKRLQTCMR 255 Query: 389 ENEKLYQLPGSELLLVLSGPETEG-----RLQHMVNILNSR---QIHWNNTGLDMGYGAA 440 E + L +L G E +++L + + + + + S + ++ Sbjct: 256 EGDTLARLGGDEFVVILQDLSEDSSQAAVQAETVCAKIISAINLPYYLDSYLYHSSTSVG 315 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F + T+ LL + Q+ + + + + L + +R A+ Sbjct: 316 VCLFRNQEFTVDELLKRADIAMYQAKSAGRNTQ-RFYDPTMQAALEARAALESDLRLAIK 374 Query: 501 QGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + LY Q + G + ++ G++ P +F+PL + L V+E+ Sbjct: 375 KNQFRLYYQMQVDHSGNVHGAEALIRWQHPQKGLVPPLQFIPLTEETGLIIPIGHWVMET 434 Query: 559 LLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + D + + +VN+ + R I + R+ I P + LE+TE Sbjct: 435 ACAQIKRWESDPLTRNLQVAVNVSACQFHDPSFVERAIEMLSRHKIKPGNLKLELTESLV 494 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N E ++ ++ L +G ++DDFGTG+++ L +L D +KID F++++ N D Sbjct: 495 LDNVEEAIMKMQALKSYGVLFSMDDFGTGFSSLSYLTKLPLDQLKIDQSFIRNMCMNNRD 554 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A++V++I +A + V+AE VE++ Q+ L + QGYL +P P+ Sbjct: 555 AVVVQTIIGMANNLGIEVIAEGVESETQREFLEQNKCNLCQGYLFSQPLPID 606 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 118/548 (21%), Positives = 199/548 (36%), Gaps = 28/548 (5%) Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 R L+A L+ E A +P ++ + G + Sbjct: 12 DETVSRYTVEVLLSAEGYNLVFAENGEEALKKAAESIPDLMLLDVMMPGMDGFEVCQRLR 71 Query: 268 AVSTLCLLNYNQN--FLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRS------E 316 L L + +S L VR R Sbjct: 72 TNPRLAELPIVMVTALDDRDSRLRGIEAGADDFMSKPFDRAELRARVRTITRLNRYRRLI 131 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYG 368 + A DPLT LPN L + Q + L +DN + ++ G Sbjct: 132 ETEEQLAYLANYDPLTKLPNRNLLLERLRQTLGRATRTHQDIAILALDLDNFQMINDGVG 191 Query: 369 LMMRVHCIRSICRTLLPLMQE-NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 + + + + L + + + +L G E +++ + M L SR Sbjct: 192 HDVGDKVLHEVAQRLTQTVSKIGATVARLSGDEFVVIEESDNLVKDVSEMAQGLLDNLSR 251 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + ++ + + + + E LL ++ A + ++ Sbjct: 252 SMVIDHHEMVVTASIGISVYPSDGEEAAILLKNADTAMARAKAAGKN-TYQFFKAEMNKA 310 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 ++++L N +R L +L+LY QP + + G + +L + GI +P KF+P+ Sbjct: 311 AFERLMLENQLRKVLSNNELILYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVPV 370 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L VL + + T R SVN+ + N+ I Sbjct: 371 AEEMGLIVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEALADS 430 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 +++P + LE+TE + + ++ G IAIDDFGTGY++ LKR D++ Sbjct: 431 NLNPIYLELELTESVLMAEESGIFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVL 490 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FVKDI ++ DA I +I +A + LSVVAE VETQ Q L + +QGY Sbjct: 491 KIDRSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYY 550 Query: 721 IGRPQPLA 728 RP Sbjct: 551 FSRPICSE 558 >UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6G1_9GAMM Length = 702 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 89/585 (15%), Positives = 203/585 (34%), Gaps = 32/585 (5%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV- 225 + L+ + + + ++ + Sbjct: 101 LLTLAAEADEEGNIKRMIAQVVDLTEHKKTAASLLMFKTLLDSSNDAIYVIDSHSSYIIE 160 Query: 226 ---LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 L + + + I V + + + + Sbjct: 161 CNQLGVEYLANKKEEVIHKLKVSDLNPKMAGDGAWP-----AFIDKIKKSKSIIFERTHT 215 Query: 283 QGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 ++ + ++ + +L ++R + + + QA D LT LPN R L Sbjct: 216 HIKGYDFPVEISISYIEFEEKTYVLAVMRDISQRKADEKLIWQQANYDHLTGLPNRRLLL 275 Query: 342 QAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 EQ + + L +D + ++ +G ++ + + L +++++ + Sbjct: 276 DRLEQLIHRIHHTNSSLALFYLDLDRFKEVNDKFGHAKGDLLLQDVAKRLTQCVRKSDTV 335 Query: 394 YQLPGSELLLVLSGPETEGRL-----QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 +L G E ++++ E E + + + + + R +N + + + Sbjct: 336 ARLGGDEFTIIIAELEDEDKANKITVERIAQAILNALNRPFKLDNEQVYISASIGITFYP 395 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + LL + + + ++ L+ + A+++ + Sbjct: 396 EDANFSDVLLNAADQAMYAAKKQGKN-CFQYFSFSMQEEALSRLQLVKELHLAIEKQEFH 454 Query: 506 LYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L QPI + + ++ G++ P++F+P + L V + + + Sbjct: 455 LVYQPIIALKTGLISKAEALIRWQHPTRGLVYPNEFIPTAEETGLICEIGDWVFKQVAQQ 514 Query: 563 LATHP-CDKKGPRFSVNLMPLT-LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 +A + ++N P+ L G + Y + +A+ +EITE + Sbjct: 515 VAKWRIKLDPNFQLNINTSPIEYLKSNAFLGNWVEYLNAYSVPGEALAIEITERILMDSH 574 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + G +A+DDFG GY++ +K+ D +KID FVK+I T+ D ++ Sbjct: 575 SFIPKKLVNFQSLGIDVALDDFGMGYSSLSYIKKFDIDFLKIDRSFVKNITTSVNDKIVC 634 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +I +A + VVAE +ET+ Q+ L +G Y QG+L P Sbjct: 635 EAIVAMAHKLGIKVVAEGIETEAQRRCLKDIGCDYGQGFLFSVPL 679 >UniRef50_C7QU84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=C7QU84_CYAP0 Length = 726 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 117/614 (19%), Positives = 213/614 (34%), Gaps = 31/614 (5%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + L A T + + M + R Sbjct: 93 IPFILVTGSLGEEAAVECMKAGVTDYIVKDRLFQLPTILMRSLEEFALRREQQRVMEERR 152 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + EKR L A+ +L++ L + + GY + Sbjct: 153 QAEIALRASEKRFRALIENASDIILIVAPDSQLTYASPSVERVLGYDASSLTGQRFFDLI 212 Query: 257 KLRYP-----FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMV 309 F + S L L + +T L I L + Sbjct: 213 HPDEQGEIIGFFDKIKETSNLSQLLPDFRVRTQKDTWVILEAIAKNLQEDPAVGGFVVNC 272 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNL 360 + A D LT L N AL + +E + L +D Sbjct: 273 HDITERHQTAEQLRYDASHDKLTGLANRSALLKQLKRAIEQKKRRKEDHFALLFLDLDRF 332 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G +M ++ + + L +E + L + G E + L + + + Sbjct: 333 KVINDGLGHLMGDQLLKEMAKRLQRCHREGDLLARFGGDEFVFFLKEIRQQEQAIVVAER 392 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + N+ + + + ++ + +L + A Sbjct: 393 IHQALREPFILNHQEVFISASIGITLSADHYDSPEQMLRDADTAMYWAKARGQG-GHTIF 451 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMT 534 + KQ+ L + +R A+ + +L++Y QPI + + G + ++ + ++ Sbjct: 452 APTMHLSALKQLHLESDLRQAIQRQELVVYYQPIFSLDTQKIVGAEALVRWQPPEKPLIP 511 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAG 591 P+ F+PL + L D VL+S + L + K SVNL P Q N+ Sbjct: 512 PNDFIPLAEETGLILEIDHWVLKSACQQLYQWQQEFKTLAPQFISVNLSPKQFSQPNLTE 571 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 +I + K ++ Q + +EITE N+ S + + QL + +I +DDFGTGY++ Sbjct: 572 KIAQTIKETGLAEQCLKIEITETVFLENSTSVLEILCQLQQLNIQICLDDFGTGYSSLSY 631 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L + + +K+D FV + + IVR + LA L ++AE +E +Q LLH L Sbjct: 632 LHQFPLNSLKLDRTFVSRLGKTNKNDTIVRIVATLANELDLELIAEGIEEIEQIQLLHYL 691 Query: 712 GVQYLQGYLIGRPQ 725 G Q+ QGY P Sbjct: 692 GYQWGQGYCFSPPV 705 >UniRef50_Q1NTC4 PAS:GGDEF:EAL:Response regulator receiver n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NTC4_9DELT Length = 833 Score = 635 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 119/654 (18%), Positives = 217/654 (33%), Gaps = 29/654 (4%) Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF 157 A + L L +GI+ + +S Sbjct: 173 AFALHSADSMAAATRLLTGEGVVPDVVILDLNLPDSVGIRTVERCRSLCDSPIVVLSGND 232 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 + F A R + H R A + + Sbjct: 233 EPEARRLALEAGADDFLAKGGDGPTLRRALRYAIIRHRRDSDMRLAAAVIKHTREG---I 289 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCL 274 + + ++ I GY + R ++ + A+ Sbjct: 290 TISRSDG---TIIEVNDAFCRITGYRREDVIGQNPRLLQSGRQDREFYVEMWRALGEEGF 346 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + Y ++ + + + + +R A D L Sbjct: 347 WSGEIWNKNKEGRIYPQLLTISAVPDGTGKPGHYVAIFSDISELKEQQQRLERIAHYDTL 406 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN L ++ + L +D + ++ +G + +R++ + Sbjct: 407 TGLPNRDLLADRLNHAMIQTIRRQTRLAVAYLDLDGFKAINDTHGHDVGDFLLRTLAGRM 466 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAA 440 ++E++ L +L G E + + ++ L + + + T L + Sbjct: 467 QQTLRESDTLGRLGGDEFVAIFQDLPDNETCLPLLQRLLNAAAMPVSYQETILQVSASLG 526 Query: 441 WGRFDGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F +++ LL Q Q+ + + LL I+ AL Sbjct: 527 VTFFPQSEKIDADQLLRQADQAMYQAKQTGKNR-YHLFDAVQEVAMRGHHELLGRIKRAL 585 Query: 500 DQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 + + +LY QP N G + ++ + G++ P FLP I L+ VL Sbjct: 586 NDQEFILYYQPKVNMRSGVVVGLEALIRWQHPELGLLAPAYFLPAIEDHPLAVAVGDWVL 645 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQ 615 + L LA SVN+ L Q + ++ + R+ + + LE+ E Sbjct: 646 ATALAQLAAWRRAGISLPLSVNISARQLQQDDFVAKLEQQMARWPEVPADQLELEVVESS 705 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 A ++ + I Q G A+DDFGTGY++ LKRL A +KID FV D++ + Sbjct: 706 ALADIDQVSKIITQCRAMGVGFALDDFGTGYSSLTYLKRLPARTLKIDRSFVADMLDDPD 765 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D I+ + LA+A + VAE VE+ L KLG + QGY +P P+A+ Sbjct: 766 DLAILEGVLGLARAFNRQTVAEGVESAAHADSLLKLGCEVAQGYWFAKPMPMAE 819 >UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NWP7_AZOSE Length = 728 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 110/561 (19%), Positives = 203/561 (36%), Gaps = 31/561 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF- 248 +R ++ + + + +L I GY Sbjct: 139 QDITERKRTDEALR----LWASVFANSREGIAITDRNGIILDVNEAFVRITGYGREEVIG 194 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SV 303 + + ++ + Y ++ + Sbjct: 195 QNPRILQSGRHDSAFYAGMWESLYKASNWCGEIWNRRKDGEIYPQWLNISAVRDEESEVS 254 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCL 355 + + + + +R L A DPLT L N L + + L Sbjct: 255 HYISVFMDLSQIKSNEKRLELLAYFDPLTGLANRTLLADHMRMAIARSRRESTLFALGYL 314 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ +G + ++ I + + +++ ++ + +L G E ++++ G Sbjct: 315 DLDGFKPVNDQFGHEVGDQFLQEIAKRIKSVVRGDDTVARLGGDEFVILVQGLRKPEECH 374 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 H L + I N L F ++ LL Q+ Sbjct: 375 HTFERLLAKLEEPIQLNGHHLTATGSIGVTLFPCDEADPDTLLRHADHAMYQAKEAGKNR 434 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + + + Q L+ I AL + + LL+ QP + G + ++ D Sbjct: 435 -IHLYDTEFDVEVRVQRELVERIEHALSEREFLLFYQPKVDLRRGRVIGVEALIRWQDPD 493 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G++ P FLP I +S + D VL + L SVN+ L+L + Sbjct: 494 RGLLPPSAFLPQIQNHLVSQKIDQWVLSEAVAQLMLWHAIGLDLSISVNVSGLSLQTHDF 553 Query: 590 AGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + +L + I+ + +E+ E A + E I + G R A+DDFGTGYA+ Sbjct: 554 MNTLAKLLAAHPEINRSRLEIEVLETVALDDIEHISGIISRRQAEGIRFALDDFGTGYAS 613 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK L AD++KID FV+D++ + D +IV + L++A VVAE VET + L Sbjct: 614 LRYLKHLPADVLKIDQSFVRDMLNDEEDRVIVEGVIGLSRAFKREVVAEGVETLEHYLCL 673 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +LG + QG+ I RP P ++ Sbjct: 674 MELGCDFAQGFGIARPMPASE 694 Score = 70.0 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 13/147 (8%), Positives = 32/147 (21%), Gaps = 15/147 (10%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYL 243 +I+ R ++ E+ + + +L+L I GY Sbjct: 9 LILLESKTIQTRRIEMQA---DEEMYRLIVNEISDGILVLDADFVARFANPAMLRILGYS 65 Query: 244 VPVFFIIFT----LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 ++ + F T NY + + + Sbjct: 66 PDELDGVWAGDLVWSEAEDLGRFAEETEKRRRGESGNYELRWRRKDGSARWSRISATARF 125 Query: 300 SFSVCL---LYMVRIYHRSEWLNRRWH 323 L + + + + Sbjct: 126 DPDGQFDGSLIVFQDITERKRTDEALR 152 >UniRef50_B2J1V8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B2J1V8_NOSP7 Length = 720 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 98/588 (16%), Positives = 202/588 (34%), Gaps = 46/588 (7%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 R + ++ + + + + D + Sbjct: 117 VRRELRDAQVRAERKQA-QKLLQTLASNIPGMIYSFVQYSDGSIAFDYISFGCLDLLELT 175 Query: 243 LVPVFFIIFT----LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + + TL +Y + + Sbjct: 176 PDQILENASLCFAQIHPDDYPGCYAAANESAQTLKPFSYEWRLVTPSGKLKWVQASARPE 235 Query: 299 --ISFSVCLLYMVRIY--------------HRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + ++ + +L DPLT LPN L + Sbjct: 236 CRENGDIVWYGVLLDVNERQVALREQQAALRERKQAQELIIHNSLHDPLTDLPNRTLLIE 295 Query: 343 APE---------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 E + + L +D + ++ G + +++I L ++E + + Sbjct: 296 RLELAINRAKRLETYRYAVLFLDLDRFKVINDSLGHLAGDQLLKNIAHKLKTHLREVDLV 355 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 ++ G E +++L + + + + N+ + + Sbjct: 356 ARIGGDEFVILLEDISDIEKAIQITERMLIDFQTPLMLNDAEVVISTSIGIVLGTNEYSQ 415 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 LL ++ A + + + Q ++ + IR A+++ + ++Y QP Sbjct: 416 ASDLLRDADIAMYKAKAQRRN-SYKIFDVKMHTQAVNRLTIETDIRKAIEREEFVIYYQP 474 Query: 511 IRN---------KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 I + G++ +L G++ P +F+ + + L + D +L + Sbjct: 475 IVDILGDGQSKAGRLIGFEALLRWQHPTRGLVLPKEFVSIAEETGLIVQIDRWMLYKACQ 534 Query: 562 WLATHP---CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 LA + ++NL + Q N+ I ++ + + + LEITE Sbjct: 535 HLADWKVKFATHFPIKVNINLSVQDIRQGNLIEYIDQILAQIGLEGDCITLEITESMLIE 594 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N ++ + QL +I+IDDFGTGY++ L RL AD +KID FV + + Sbjct: 595 NISQTIDLLSQLKSRKIKISIDDFGTGYSSLNYLHRLPADNLKIDRSFVSQMQQGNRNYQ 654 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +V +I L+ L+VVAE +ET QQ L +LG ++ QGYL +P Sbjct: 655 VVSTIIALSNQLGLAVVAEGIETPQQLQWLQELGCEFGQGYLFSKPLS 702 >UniRef50_Q2NCL2 Sensory box/GGDEF family protein n=2 Tax=Erythrobacter RepID=Q2NCL2_ERYLH Length = 783 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 112/741 (15%), Positives = 247/741 (33%), Gaps = 38/741 (5%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW--- 77 + ++++ H + ++ L+ L + GW + + +F + W Sbjct: 36 ALQYARVAQHTRFRLGAHFACAAISCWISLQHLAWLTVLGWAIGLALTLSIFTSQDWLLR 95 Query: 78 -NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI 136 + Q + ++ + L W YG + + L + + + Sbjct: 96 KADGRTLSQREAFRHASGSALVAIAWAAQPVLH--WLYGTPTSMLQAWLIVMVVTLGSSL 153 Query: 137 KCSMY----LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + ++ I F V LL + + R + Sbjct: 154 ALAAAPLGAIIYIATTSMTAIVVFGLAGQYPPAVAALLYMLVILWGVYQRAEAFLRQSAA 213 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF------IAGYLVPV 246 E+ W + + + G Sbjct: 214 EAGMNERNEVVSLLLREFEENEADWLWQIDTQRKVRSVSPRFAFALGLEPGEADGMPFLQ 273 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 G+ +L + + + ++ + Sbjct: 274 LIAGDAWKTGQFPTSLHDLAERLKRKESFSNLLVKVSIDGVTRWWELSGTPMLDEEGKYV 333 Query: 307 Y---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCL 355 + + + A D LT LPN + ++ + + +F + Sbjct: 334 GYRGVGSDVTEQRESSEKIAYLARYDTLTELPNRLMVNESLGEAMKYAKQWRSRCAFMMI 393 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + L ++ ENE +L G E +V+ + + Sbjct: 394 DLDRFKAVNDSLGHQTGDELLAEVSGRLKSILSENEMCGRLGGDEFAIVIRDVKDRDYVD 453 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S+ N+ L +G + +++ L+ ++ Sbjct: 454 TVARRVIEHLSQPYEVNHHMLYVGASVGSAIAPRDGRSVEELMRNADLALYRAKDLGGGE 513 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 E + ++ L ++R ALD+ + L QP+ + ++ +L + Sbjct: 514 HFQ-YEPSLHKSAEERRQLEFSLRMALDRQEFELAYQPVVDANDETIISFEALLRWNSAE 572 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G ++P KF+PL L VLE A P + +VN+ P L++ + Sbjct: 573 HGFVSPAKFIPLAEDTRLIVPIGSWVLEQACIEAANWPD---PVKVNVNVSPEQLVEPDF 629 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++R + + LE+TE +A + ++++ G ++A+DDFGTGY++ Sbjct: 630 VATVVRALSTSGLPANRLELEVTESIFVRDALVAGKALKEVMHLGCQVALDDFGTGYSSL 689 Query: 650 ERLKRLQADIIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L++L IK+D +FV+ + I+R++ +A + ++ AE VE+ ++ L+ Sbjct: 690 GYLRQLSFSTIKVDRMFVQGAAQGSKESLAIIRAVVAMADSLDMTTTAEGVESFEEAELI 749 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +LG +QGY GRP A+ Sbjct: 750 RELGCTKIQGYYFGRPMVKAE 770 >UniRef50_A8GZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GZQ7_SHEPA Length = 696 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 102/556 (18%), Positives = 205/556 (36%), Gaps = 24/556 (4%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFII 250 + ++ + + AA+++ + + + GY P ++ Sbjct: 116 QEQNQEKNQEEMQTNDPLLKAVLESAAVAIYAIDDKGKCIFANPICAQLLGYTSPE-QLL 174 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYM 308 + + F + + + + + L + Sbjct: 175 NFNMHELIYQNHSCTEATLPLSNGEVKEDIFWRADGSSFPVDYKSQPLVLQHNRNGAVIS 234 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNL 360 QA D LT LPN + EQ + L +D+ Sbjct: 235 FYDNSERLEAEALIRHQAHYDTLTELPNRFLALKRLEQLVEASERSGQMIAVIFLDLDDF 294 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + S + LL + + + +L G E +++L G + Q + Sbjct: 295 KKINDSLGHEAGDQLLISASKRLLNATRSEDTVGRLGGDEFIILLDGLSSASDAQPLAEN 354 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L + + +N L + + + ET LL + + Sbjct: 355 LIGGFRKPFYIDNRQLVLTASIGIAIYPNDGETSSELLRNADSAMYHTKSIGRN-TYSYF 413 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 ++ + ++++ + I AL++G+L + Q + G + +L G ++ Sbjct: 414 THAMNKEVSRRLAIEEQIHGALERGELQAHFQIQLDIRDGSIMGAEALLRWNNPTLGNVS 473 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ Q + +L+ L+ T R ++NL P N+ I Sbjct: 474 PAEFIPIAEQTGVIEPMGEFILKCALEAARTWQKLFNDKFRVAINLSPRQFRNPNLVQLI 533 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ + P + LEITE S ++ ++QL GF I++DDFGTGY++ L+ Sbjct: 534 TDQVYKFGMRPDDLELEITEGVLLSGHAYTLDALKQLSNAGFCISMDDFGTGYSSLSYLR 593 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 I+KID F+ D+ + ++ + ++A A + V+AE VETQ+Q L + Sbjct: 594 TYPFQILKIDRSFISDMNKDGKSNELIIATIEMAHALGIRVIAEGVETQEQLDELSFMMC 653 Query: 714 QYLQGYLIGRPQPLAD 729 Y QG+LI + PL + Sbjct: 654 DYAQGFLISKAVPLTE 669 >UniRef50_C0N5Y8 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5Y8_9GAMM Length = 1085 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 112/585 (19%), Positives = 209/585 (35%), Gaps = 29/585 (4%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 V LLS ++ + I A+ R ++ + Sbjct: 357 VALLSTSFLQDTFDSELLLVVYDITVRKEAEEQLRFSSRVFNQAQEG---IIITDTSG-- 411 Query: 227 LLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + I G+ F + ++ + Sbjct: 412 -TITDVNPAFCEITGFSREEVLGKGPDILNSGKHSPEFFSKMWQSIIEHGYWQGEVWNRR 470 Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y+ ++ + + + +++ + A D LT LPN Sbjct: 471 KNGELYAELLTISAITDDDGQSRHFVGLFSDITQTKQQQETLEMMAHYDVLTKLPNRVLF 530 Query: 341 EQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 Q + C L +DN + ++ YG + + + L +++ + Sbjct: 531 ADRFSQAMAHSNRTETMLAICFLDLDNFKPVNDTYGHEVGDQLLIEVAVRLRKNVRDEDT 590 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + + G E ++ E++ + M+ + ++ + N+T +D+ + + Sbjct: 591 ISRFGGDEFAILFRDIESQSECEFMLRRIHESLAQPYNVNDTRIDISASSGVTFYPQENA 650 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 L LL Q+ + Q ++ L IR L+Q L+ Q Sbjct: 651 DLDTLLRHADQTMYQAKLAGRN-TYKLFNPAKNRQNIEKQQWLQQIRLGLEQDQFRLFYQ 709 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P N E G + ++ + G+++P FLPLI + V+ S ++ L Sbjct: 710 PKVNMRTGEVFGMEALIRWVHPKKGLLSPIHFLPLIEGSEIEIDVGNWVMRSAMQQLQVW 769 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMY 625 + K SVN+ L L + + + I + + LEI E A + + Sbjct: 770 HDEGKEIEVSVNVASLHLQSAHFIDDVEAALATHADIDSRYLQLEIVETSALGDIGAISK 829 Query: 626 NIEQLHKF-GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 I+ G IA+DDFGTGY++ L+ L A IKID FV+D++ + D IV ++ Sbjct: 830 VIKLCRDLLGVSIALDDFGTGYSSLTHLRHLTASTIKIDQTFVRDMLDDPQDYTIVDGVS 889 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA+A + V+AE VET + +L G + QGY I +P P + Sbjct: 890 GLAEAFNRQVIAEGVETTESGLMLLMSGCERAQGYGIAKPMPAEE 934 >UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Methylobacterium RepID=B1ZEQ0_METPB Length = 716 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 114/647 (17%), Positives = 216/647 (33%), Gaps = 39/647 (6%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 TS QR + + + + F + + Sbjct: 47 PTSLIGTQRSAMICEAAGASLATYRETIAARRPFRELTYVYRHPDGTPRWFEISGRPHFS 106 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----L 230 + + + + H ++ A + +R + + L Sbjct: 107 AEGTFLGYQGVGSDVTEQHRTRLALVEAHAELSEQNRRFDAALENMTHGLCMFDAEQRLL 166 Query: 231 CTPYENDFIAGYLVPVFFIIF----------TLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 I G + LG K ++ T + Sbjct: 167 VWNRRYLEIFGLPEGALHVGMGQRAIIEVLVALGRYKRGLTVDAVSEGTRTSLTDEGPKA 226 Query: 281 FLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 L+ + +A + + R A D LT LPN L Sbjct: 227 VLRELADGRVIAVTHRPMA-EGGGWVATFEDITERRRNEARIIHMARHDGLTDLPNRTRL 285 Query: 341 EQ-------APEQE--AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + A + CL +D + ++ +G + +R++ L ++ ++ Sbjct: 286 REIGAERVEALRTGADGQLAVLCLDLDRFKPVNDSFGHAVGDALLRAVAGRLRGHVRGHD 345 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E + LS E + L + + +++G Sbjct: 346 VVARLGGDEFAV-LSHVEDAAGAMGLAERLIEIVAAPYRLDGITVEIGMSVGIALAGAED 404 Query: 449 E---TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + ++ LL + ++ A E + +++ L +R AL Q Sbjct: 405 DLPRDIECLLKEADIALYEAKTGGRGTA-RLFEPQMDATLRERLGLERELREALAQSRFE 463 Query: 506 LYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ QP+ + G + ++ + G++ P F+PL + L VL + Sbjct: 464 LHYQPLVDLSDNRITGMEALVRWRHPERGLVNPAVFIPLAEETGLIVPIGEWVLSQACRD 523 Query: 563 LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 A P +VN+ PL L + ++ + + LEITE + E Sbjct: 524 AAAWPDA---ISVAVNVSPLQLRNRGFVQSVLGALATSGLKASRLELEITESVLLDDTEV 580 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ + L + G RI++DDFGTGY++ L+R D IKID FV D + I+R+ Sbjct: 581 NLETLHSLRRLGVRISMDDFGTGYSSISYLRRFPFDKIKIDRSFVPDSAGQSDAGAIIRA 640 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I L + ++ + E VET+ Q A + G Q +QGYL P+P+ + Sbjct: 641 IVSLGASLGITTLVEGVETEPQLATIRAEGAQEVQGYLFSPPRPVHE 687 >UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Comamonadaceae RepID=A9BNX4_DELAS Length = 916 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 119/723 (16%), Positives = 234/723 (32%), Gaps = 55/723 (7%) Query: 44 LAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAI 103 + ++ + + + V G + G + Sbjct: 181 MLYLVRPLSRAEQGGYVLMQVPAAALGAVLAQGGVLDGLEVTLEQGSGELLLS-MPQYGD 239 Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 + L S V L V + + + L +S+ Sbjct: 240 VAAVRLLPTTSQLPSSGVMHMAARLSRVPALVAAHPLPKGHLWVTASLPMSSVLASWRVA 299 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 ++ L + VL+ + + H + E+ Sbjct: 300 AWLMVLAVMIFGVLLAVLGWT--------VHRYMDRLHAARRQAQRSEQWLDQALDSMVS 351 Query: 224 SVLLLL-----LCTPYENDFIAGYLVPVFFIIF--------------TLGVGKLRYPFLN 264 LLL L + + + Y + Sbjct: 352 GFLLLDSQQRVLRWNRCYEEMFPWHADQLEPGRPLQSLLDSCPSAVGLAAAPAQAYEAKD 411 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 L + + + Q + LA ++ Sbjct: 412 LHRQLVLRPGVPFEQQL--PSGRFVQMTARLAAEDG----VVITYNDVTDIRLATAEIES 465 Query: 325 QALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A DPLT LPN R L + + L +D + ++ G + + Sbjct: 466 LAFYDPLTSLPNRRLLLDRLAQATVLAAREGWTGALLFLDLDQFKMLNDTLGHEVGDQLL 525 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-EGRLQHMVNIL-------NSRQIHW 428 + + L ++ ++ + +L G E +++L + + ++ Sbjct: 526 QQVAHRLRSAVRSSDTVARLGGDEFVVMLCELSHEPAEAATLAQRIGEKILARLNQSYVL 585 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 F ++ LL Q Q A + L + + + ++ Sbjct: 586 GAHLHRSACSIGATLFGRQPQSAAELLKQADIAMYQIKARN-GSGLCFFDPQMQVEIHQR 644 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 V + +R AL Q L+ QP E G + +L + G++ P F+ + + Sbjct: 645 VRMEGDLRQALAQSQFELHYQPQFTLAGEVIGAEALLRWRHPERGLVPPGMFIAVAEESE 704 Query: 547 LSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 + + V+ + + LA + + +VN+ +N A ++I + I+P Sbjct: 705 IIVPLGMWVIRTACEQLAIWQKDARLRHLQVAVNVSARQFRHQNFASQVIEQVRNAGIAP 764 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE N + S+ ++QL G ++DDFGTG+++ L +L + +KID Sbjct: 765 HLLKLELTESLVIENVQESIDKMKQLRSHGVCFSMDDFGTGHSSLTYLTQLPLNQLKIDQ 824 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+ + D +IV++I +A+ +L V+AE VET +Q+ALL G +Y QGYL P Sbjct: 825 SFVRHLGLRHTDDVIVQTIIGMARNLNLDVIAEGVETLEQRALLAHYGCEYFQGYLFSPP 884 Query: 725 QPL 727 P+ Sbjct: 885 VPI 887 >UniRef50_A7FEI0 Sensory box-containing diguanylate cyclase n=29 Tax=Yersinia RepID=A7FEI0_YERP3 Length = 855 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 105/600 (17%), Positives = 213/600 (35%), Gaps = 27/600 (4%) Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 T D + T + + L L+ ++ +I R A E Sbjct: 248 STLTLHWDQEMPGTPLLNILLPLLALVALIIGLTAWLVIRRAISGAKATDRSRAALAASE 307 Query: 212 KRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 +R ++ A+ + I+G+ V + + L Sbjct: 308 ERFRHVAESASDWLWETDAELQVTYLSPRFLIISGWSVDHWLGRHLDSLLNCDITSLRTW 367 Query: 267 WAVSTLCLLNYNQ--NFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRW 322 + L + ++ +I V R +R Sbjct: 368 LQHTHLTDSRNELQCTYFSAKGSKRVCRIHAKPIIQQGEIVGFRGTASDLTREIEAEKRI 427 Query: 323 HLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVH 374 +L D LT LPN + + E + + +D + ++ ++G + Sbjct: 428 EHLSLHDALTGLPNRTLMTEFLENKLHNLAAVEHPLVILNVNLDKFKPVNDNFGHVTGDQ 487 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNT 431 + + L +++ + + + G E +L++S + ++ + + +R N Sbjct: 488 VLYQVAERLRSCLRDKDLVSRQGGDEFILIISDLSSSYEIELLCARVITRIQMPYVINEQ 547 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + +G + + LL ++ ++ + +++ L Sbjct: 548 EIYLGASIGITLAPQDSMQAEELLRFADIAMCEAKNSARNR-WRFYASEMNDRLMQRIEL 606 Query: 492 LNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +R A+ + + LY QP + + G + ++ G++ PD+F+ L + L Sbjct: 607 EKFLRLAVKKSEFCLYYQPRYRTDDMQLIGAEALVRWNHPVLGLLMPDQFIALAEETGLI 666 Query: 549 ARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 L + T P SVN+ + + + R+ + + + Sbjct: 667 TAISDWTLLQACQDAMTWPTS---LIVSVNISAIEFRGQCLIERVRQALLVTGLPSHRLE 723 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE +A+ ++ + L G R++IDDFGTGY++ L R D +KID F+ Sbjct: 724 LEITERIMIEDADGALKIMTALKTLGIRLSIDDFGTGYSSLNYLHRFPFDGLKIDKSFID 783 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + IV I +L A S++V+AE VET +Q L L +QGY + +P P+ Sbjct: 784 KLTESHEGQSIVEGIINLGHAISMTVIAEGVETAEQLTYLQSLHCDEVQGYFLAKPMPVE 843 >UniRef50_A0YGV9 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGV9_9GAMM Length = 760 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 137/745 (18%), Positives = 246/745 (33%), Gaps = 44/745 (5%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHL 81 + IS ++ + W + + I+ VV + Sbjct: 16 GLFKLYPISISSTYLLVLVNCYALWSVVP-TVHIVLWLSVATVVSIYRYSLFAIRTRNST 74 Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF----WLGLVTPIGIK 137 ++ + L L + ++ + Sbjct: 75 RLSPERWLIHNDVTSALSGMYWGYGLLYLVPPDSIAHMLIFVIAVTGLVSGASSSLSLSP 134 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 S L P+ I + D + + L + + L + Sbjct: 135 RSFLLYMISCLMPMSILLYGMSDDYGWLLFGLCYFYIYFMWQTCLTIGENARLGIVQTV- 193 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFF---I 249 R+ + + + L ++ I GY Sbjct: 194 -SLRQQKEELIASGRLLDLHFMGSPLGLIDWDEDLKIKRWNPAAASIFGYPESEILNQKP 252 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY-- 307 F L R F L L N + S + L S LL Sbjct: 253 DFLLTDNAGRDYFKILRQGKQALAN---TVNSRKRDGGAVSCEWASTPLEDGSGTLLGYT 309 Query: 308 -MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRID 358 V + ++ QA D +T LPN R + QE + + +D Sbjct: 310 SFVTDISKRLEHEQQITHQAFYDAVTDLPNRRYFYERLRQEMSRVQRGPNHSAVLFIDLD 369 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-------- 410 + + ++ G + ++ L ++++E L +L G E +L+L + Sbjct: 370 HFKNINDSLGHALGDELLKQFAMRLQNRLRQHEVLARLGGDEFVLLLEELDPDLDKSQAI 429 Query: 411 EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 G++ + L N + FD +L Q +S Sbjct: 430 AGQVAKALQTLIQEPFVLENNPYTLTCSIGITLFDKTDFNESEILKQADLALYRSKHRGR 489 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 E+ +S Q + ++LLN +R A+ + L QP + E +G + +L Sbjct: 490 N-CYSFFEQEMSEQALRHLILLNNVREAIGSEEFSLVFQPQVDIHTAELKGAETLLRWNN 548 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTL 584 + G ++P +F+P++ L VL+ + L R ++N+ P L Sbjct: 549 SELGRVSPAEFIPILESSTLIVEVGHWVLDHSFEQLKEWQLAALWHEPMRLAINISPRQL 608 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 L + ++ L ++ +SP + EITE + E +++ G +IDDFGT Sbjct: 609 LDPDFIEQVTALLNKHELSPSLIEFEITENVLVQDVEKVGVILDKFASMGISFSIDDFGT 668 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK+L D++KID F+ + D +IVRSI + L+ VAE VET++Q Sbjct: 669 GYSSLSYLKQLPIDVLKIDKSFIDHCTSEGNDQVIVRSILSICTELGLTSVAEGVETEEQ 728 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 Q L +G LQGYL RP + Sbjct: 729 QKKLQAMGCDLLQGYLYSRPVRADE 753 >UniRef50_B9M3D1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3D1_GEOSF Length = 934 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 110/702 (15%), Positives = 233/702 (33%), Gaps = 38/702 (5%) Query: 60 GWRGVVPVLCGMFCTNLWNFHL-----SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY 114 G L G ++ + + + + IL + Y Sbjct: 218 GRILRPGTLIGSSFFHMAANGFEGTKERENSRGIRVLTTYRHLRATNWILGANYPLKEAY 277 Query: 115 GLTSRY----VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL 170 + F + L + YL + I + G+ V L Sbjct: 278 APVEQAKFYVALASFFGIILSILVVWLGMRYLTMPLLNMARHIRSMHGEPGKTSPVEVLS 337 Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL 230 L ++ Q R + + + ++ + + ++ Sbjct: 338 EDEIGELGL-----AFNDLLDRVGKEQEALREAVLTAKNERAKSEAIVAALGDGMSMVDT 392 Query: 231 CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL----TWAVSTLCLLNYNQNFLQGVE 286 + I + L++ + ++ Sbjct: 393 DFKVLYQNKVHQTLAGGEFIGSYCYQAFEGKDAPCSGCPVAMSFADGLVHTAERVVERDG 452 Query: 287 TEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + L + L + + + +VR R + + A D LT LPN R + Sbjct: 453 EKLYLEITASPLFDYDGRINAGIEVVRNISRRKQMESAIEQMAFHDALTGLPNRRLFNER 512 Query: 344 P--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL-MQENEKLY 394 + + L +D+ + ++ G + ++ + L + + + Sbjct: 513 LAQAIAYAQRNDQFLAVMFLDLDHFKDINDSLGHTIGDELLKEVATRLKRCGRRAEDTIA 572 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E LL LS + + H+ +L + L + + + + Sbjct: 573 RQGGDEFLLFLSEIKDKEDAVHLAALLLQEMTAPFILSGYELFVSVSIGISIYPHDGRDV 632 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + L ++ +++ + + +++ + ++R A+ + L+L+ QP Sbjct: 633 ETLASNADIAMYRAKQQGRN-SVNLYNHSMGEKNRQRLTVETSLRRAIGKNQLVLHYQPQ 691 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + G + ++ + G++ P F+P + L VLE+ Sbjct: 692 VSVHSGKIIGMEALVRWNHPEQGLLLPTSFIPQAEETGLILDLGEWVLETAAAQNKAWQD 751 Query: 569 DK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + SVN L Q++ ++++ K+ + + + LEI E ++ + Sbjct: 752 AGYPPVKISVNYSQRQLRQQDFVEKLLKSLKQTGLEARWLELEIREAVMAEGIMDNLQAL 811 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L G RIAID+FG GY+ ++L D +KID FV I ++ + I ++ LA Sbjct: 812 AALRDVGVRIAIDNFGAGYSCLKQLGDFPLDALKIDLSFVSQISSSEVKKAIAGTVASLA 871 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 K LSV+A+ VET++Q LL LG +QG P P + Sbjct: 872 KGLHLSVIAQGVETKEQMQLLCSLGYGEMQGNYFSNPLPAEE 913 >UniRef50_Q21VJ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VJ9_RHOFD Length = 735 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 118/713 (16%), Positives = 230/713 (32%), Gaps = 51/713 (7%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILR----WQLGTRWRYGLTSR 119 P + L V+L +L + L + L + G R Sbjct: 13 WTPSAVSFASHGWSAPAPAQLPAQVLLVDDEPRMLSSLGELLKDRGFVLTSAANGGEAIR 72 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 Y+ Q+ F L ++ S + + F + + + + +L Y Sbjct: 73 YLGQQPFDLVILDLRLPDISGHDIMDFMNSQQADANIIVTSGDRGIDAAIGALKRGAYDY 132 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIA------PSLGKEKRAFTLSWLAALSVLLLL---- 229 Y + + A R E++ L + + L Sbjct: 133 LRKPYSPEELRKTVDNALKQRRLQAENRHIAWQLESSERKYRYLVDSSPDIIYTLDHEGR 192 Query: 230 -LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY----NQNF--L 282 + G+ + + Sbjct: 193 FTFVNDRVQQLLGFSREELIGEHYSVLIQEDDVLRANYVFNEGRGDYRLSRNVELRLKSR 252 Query: 283 QGVETEY---SLAFILA-----------VLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 ++ + R + + QA Sbjct: 253 HAKGEVRTFTHELMTISFNASDTSQEPDSTQQELFGTYGVARDITDRKRADELITYQAYH 312 Query: 329 DPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN + +A + + +D + ++ G ++ ++ Sbjct: 313 DILTDLPNRVLFKDRLGLAVLQAKRNDASLALMFIDLDRFKLVNDTLGHVIGDKLLQQAA 372 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 L ++ + L +L G E VL + + + + Sbjct: 373 IRLKACLRSGDTLARLGGDEFTAVLPELSDRQDAVLIAEKFLECLRQPFQLAGQSVHISA 432 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + G+ E+ L+ A + + + +++ L +++R Sbjct: 433 SIGIAIYPGDGESTDELIRNSDIAMYHMKAEGKN-GHSFFDRSMLDASCQKIELEHSLRL 491 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++G+L +Y QP + ++ G + ++ + G + FLP + L Sbjct: 492 ALERGELEMYYQPQVDVRTQKIVGAEALMRWNHPERGFLGAGDFLPFAEENGLIIPITDW 551 Query: 555 VLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 +LE++ L + R S+NL P L + + ++ +HI+ + +E+TE Sbjct: 552 MLEAICLDLLDWNAAGGEPVRLSLNLSPQYLDRGDFFDKLKNALTLHHINASQIEVEVTE 611 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N ++++ + +L + G +AIDDFGTGY++ L R IKID FV I + Sbjct: 612 NICIHNPQTAIEQLNKLCQLGVSVAIDDFGTGYSSLSYLHRFPIHTIKIDRSFVMKIQND 671 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +V +I +AK SL++VAE VETQ Q+ L + G +QGYL +P Sbjct: 672 NSQCPVVLAIISIAKGLSLNLVAEGVETQVQERYLERSGCNTMQGYLYHKPLS 724 >UniRef50_Q1Q7M3 Similar to ScrC (Sensory box/GGDEF family protein) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7M3_9BACT Length = 736 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 88/571 (15%), Positives = 186/571 (32%), Gaps = 45/571 (7%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFF--IIFTLG 254 + E + + + + + + + GY + + Sbjct: 145 KMQRHLKKSEVLHRYIVNNSPDIICTIDHEGRVMFINTKIENFLGYKPQELIGKLYSEIV 204 Query: 255 VGKLRYPFLNLTWAVSTLCLLNY-----NQNFLQGVE--TEYSLAFILAVLI-------- 299 + NY + L + Sbjct: 205 SPEDVERLNVFVKEKIRRGSGNYPSDKIEVCLVPKENYFKSRYFELTLFPVELNLLGFQP 264 Query: 300 -------SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------P 344 + + + H QA D LT LPN + E+ Sbjct: 265 KNGNISGDKLFGVYAIAHDITERKEAKEYIHFQACHDLLTKLPNRTSFEKRGRLAISKAR 324 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + + + L +D + ++ G + ++S+ + L +++ + L + E +L+ Sbjct: 325 QNDCIVAVLFLDLDRFKIINDSLGHAVGDQLLQSVTQRLESCLRKCDILSRFGADEFMLL 384 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + + + + + F + ET++ L+ Sbjct: 385 LPEINAPENARQVALKITDIMHTPFVIGDQEIFGDVSIGISFFPEHGETIEQLIQNAEIA 444 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 Q+ + ++ + ++ + +R AL + + QP + G Sbjct: 445 MYQAKCRGK-KGIQFFDKGMKTSGPHRLAMERDLRRALKNNEFEIVYQPQITINTGKVIG 503 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSV 577 ++ ++ + G + P +F+P+ + L VL + R S+ Sbjct: 504 FEALVRWNHPEKGKIRPSEFIPVAEETRLIEDLGEWVLHHACCEVREWIKKGHDTIRLSI 563 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ PL + + + + + + +E+TE ++ E + LHK + Sbjct: 564 NISPLQIENPHFVENFVHMLGICQFPGKNMEIELTESILMTDLEHMAQILNHLHKHSITV 623 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFG GY++ +++L +KID F++ I T ++ +V +I + K L VAE Sbjct: 624 AIDDFGIGYSSLSYIQKLPIHTLKIDQSFMQSIQNETDESCLVNAIIAMGKGLHLCTVAE 683 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET Q L G +QGY G P+ Sbjct: 684 GVETMTQIKYLQNQGCDAVQGYYFGEPRSGE 714 >UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCU3_9GAMM Length = 723 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 88/580 (15%), Positives = 185/580 (31%), Gaps = 20/580 (3%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 L + L + + + + + + + T + + + Sbjct: 128 LQAKLQVFLELANHRHLIYQQLTDLERLEKRNQLLLKSIGEGILGLSTDGQVTFSNPVAQ 187 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 E + + + F Sbjct: 188 QTLGMSEQELEGRSFSDIVYHGDAEQPLVTWEYLPARLACEQGQAYHERIGVFWDRAGQL 247 Query: 289 YSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + + + ++ + + A D LT L N A Sbjct: 248 LPVEYKATPMMVDDDLAGIVIAFQDITERRRTEEQLARLAQYDALTGLVNRNAFNGLLKK 307 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 E + + +D + ++ ++G + ++ + L ++ + + +L G Sbjct: 308 ALSRSARHEQPLALLFIDLDQFKTINDNHGHEIGDSLLQEVAMRLTDCVRNGDIIGRLGG 367 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +++L + + + + +G + + T + LL Sbjct: 368 DEFVIMLESLQATKDAARVSQSVLDALEAPFTIRGHQIFIGASIGIAVYPDSALTARELL 427 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE 515 +S + + + + L +R A Q + +Y QP Sbjct: 428 RCADIAMYRSKEEGRNR-YRFFTDEMQESVREALQLEIDLRRAYRQQEFDIYLQPKICMA 486 Query: 516 ---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-- 570 G + ++ + DG + PD F+P + L V + + Sbjct: 487 TESVIGAEILIRWPRPDGSFLPPDVFIPKAEEMGLIHDIGEWVFRETCDTIRSWQQQNRI 546 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 F++N+ L ++A I + K I P + +E+TE + ++ + Sbjct: 547 PLDFTFAINISMRQLHTGHLAEDIAAIVKEVGIDPNCLEVEVTESIMMQDPRVTIDALNA 606 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 LH+ +I+IDDFGTGY++ L++L D IKID FV+ + ++ IV +I L Sbjct: 607 LHQQKIKISIDDFGTGYSSLSHLRQLPIDAIKIDKSFVQALESDGQADAIVNTIISLGHN 666 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE +ET+ + L G QGY +P D Sbjct: 667 LDMRVIAEGIETEANRQALTAAGCDVAQGYFYAKPMCRED 706 >UniRef50_Q2I6K9 Multidomain signal-transduction protein n=1 Tax=uncultured delta proteobacterium DeepAnt-32C6 RepID=Q2I6K9_9DELT Length = 955 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 100/620 (16%), Positives = 202/620 (32%), Gaps = 33/620 (5%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 + G L + DA+ +L L F L Sbjct: 304 LIAGGRPTGRLDLWVKAECRDAVTLSAELTPWIALALENARSFTALEAHRTLLQDKVHAL 363 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY-----ENDFIAGYLVPVFFIIFTLGV 255 + ++R + + L + + G + Sbjct: 364 EQAEEALRQSKERYELAVRGSNDGIWDWSLDSGVVHYSTRWKQMLGCELTDVKETIPEWF 423 Query: 256 GKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLL 306 ++ L + L + + + Sbjct: 424 DRIHPDDLVRVKRLLNKHLSGELPHFEAEHRMRHRDGKYSWMLTRGEAVRHPDGTPYRIA 483 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRI 357 + + A D L L N + E+ + + + Sbjct: 484 GSQSDITARKIAEDQLRHDAYHDVLCGLANRALFMERLERAIKRLNRRDDYLYAVLFVDL 543 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + + + L ++E + L +L G E ++L + Q Sbjct: 544 DRFKNINDGLGHLAGDSLLIELSTRLSGYVRETDTLARLGGDEFAVLLEDICSPLDAQRA 603 Query: 418 VNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + + + + + +L + Sbjct: 604 AQRFQEALTTPFQLKGQEVFVTASIGIALGNRSYSGAEEVLRDADTALFYAKDGGRAR-H 662 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 ++ + + + ++ L N +R ++D+GD L PI + E G++ ++ + +D G Sbjct: 663 ETFQRGMHLRAQARLQLENDLRRSVDRGDFHLVFHPIVDVESCEIAGFEALVRWMHHDRG 722 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKN 588 ++P+ F+ + + L V+E + +A S+N+ P L + Sbjct: 723 QVSPEDFIGVCEETGLIIPLGKLVIEGACEAIAEWRQRHPELSPPTISINVSPRQLSAEG 782 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + +R+ ++PQ + LEITE + +SS+ ++ L G + IDDFGTGY++ Sbjct: 783 LVDDVRHALERWKLAPQLLTLEITESALLDDIDSSIQVLKDLKDLGVGLQIDDFGTGYSS 842 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L +L D +KID F++D+ ++T IV +I LA + L V AE VE Q L Sbjct: 843 LSYLSQLPIDALKIDRSFLRDMTSDTNQFNIVSAIITLAHSLDLEVTAEGVEHVAQLDEL 902 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 +L + QGY P Sbjct: 903 RRLRCNHAQGYYFTTPISSD 922 >UniRef50_Q2W5V0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W5V0_MAGSA Length = 820 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 101/564 (17%), Positives = 180/564 (31%), Gaps = 27/564 (4%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 R + A+ R +A + ++ + + G+ Sbjct: 254 SIRDLTQSKKAEASVRLLSQAVEQSP------VAVAVVGGDGMVQYVNSAHASLTGHSSS 307 Query: 246 VFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---S 300 + L GK + + L + T + + Sbjct: 308 AVVGKPLSALYPGKAGAMLGDFWRTLLGQGELQGELQVNRQDGTWQWQQVHGSKVATPGE 367 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 L + + RR QAL D LT LPN + Sbjct: 368 EGTHYLLQIEDVTLRKDQERRLQHQALFDGLTDLPNRVHALDRLAREIDMARDHGRKVGL 427 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + +D + ++ G + L + + + G E L+++ E Sbjct: 428 LFVDLDGFKAINDSLGHEYGDELLVLAAERLRQAAGDGGVVARFGGDEFLVIMGDMEDGA 487 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + S+ + L + + T Q LL Q+ Sbjct: 488 AAGEVAAAIVDRFSQPFTISRRDLISTASIGLALYPEDGRTQQTLLRNADIAMYQAKLAG 547 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 ++ + ++ + +R A+ L QP+ G + +L Sbjct: 548 RNR-FCFFTSRMNEEAEARLRMEGELRRAVGTDQFHLVYQPLVAVATGRAVGVEALLRWS 606 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLL 585 + G + PD+F+P + VLE+ + D R +N+ P Sbjct: 607 NPELGNVPPDRFIPQAETCGVIVAIGRMVLETACRDARRWVEDGHADLRLCINVSPRQFQ 666 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 G + +SP + LEITE + + L G +++IDDFGTG Sbjct: 667 DAGFLGDVRAALAGSGLSPANLELEITEGLLLTERGDVDTLLRTLTDMGVKLSIDDFGTG 726 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L+R D +KID F+ ++ ++V +I +A L V+AE VET +Q Sbjct: 727 YSSLSYLERFPFDTLKIDRSFMIGMLERQERKVLVETIVAMASGLGLEVIAEGVETAEQM 786 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 A L + QGYL RP P D Sbjct: 787 AHLAAINCDIAQGYLFSRPVPAGD 810 Score = 61.1 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 21/259 (8%), Positives = 52/259 (20%), Gaps = 8/259 (3%) Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 L + + L + L G + V+ + Sbjct: 14 AGLHAAEAAGERIPAGLHAALLRDLPDVLYSVDAAGRFIWVSPNAATVFGYSAEELVGME 73 Query: 134 IGIKCS--MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + VG+ + + M I Sbjct: 74 AAALYAKPEDRVGTVRRIRDAGGRAVRSEVEMRRKDGISIWAAIYACALMDGEGRITGIN 133 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVF 247 + E R LS +A ++ + ++ + + Y Sbjct: 134 GAIRDITEIWQTRKTLGDSEDRFRRLSDVATEAICIHFQGKIIDMNKAFETLFAYSRDEL 193 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLL 306 ++ V V+ Y ++ + + + + Sbjct: 194 LTMWAWDVI-DPRDISLAKSMVAQQYEAPYEVRGIRKDGSVFPMEIHSKHSRMGGDSVRV 252 Query: 307 YMVRIYHRSEWLNRRWHLQ 325 +R +S+ L Sbjct: 253 TSIRDLTQSKKAEASVRLL 271 >UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=Q6LQD7_PHOPR Length = 1053 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 100/579 (17%), Positives = 203/579 (35%), Gaps = 25/579 (4%) Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 A + I + + S E+ T+ + + Sbjct: 460 ALIASETVFSSTSEILLHISDVTDWIERELKLKSLSHAVEQSDNTVLITDKNGI---IEY 516 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVG----KLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + + G + + + ++ + +N + T Sbjct: 517 VNHSFEAFTGITSAQAVGRDSRTLMKGSNETTSEIKHIRQQLKAGRTINRVITRKKSDNT 576 Query: 288 EYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 ++ + + + + + + H A D LT LPN L Q Sbjct: 577 VCYEDETISPIRNDTGKISHYISTGKDITERVLFESKLHKLAHYDLLTELPNRLLLLQHI 636 Query: 345 EQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 EQ + +D + ++ G + + +I + + +++ + L +L Sbjct: 637 EQAITNAEEMKTSVVVFNIDLDYFKKINDSLGHDVGDKVLITIAKRITRSLRDEDVLARL 696 Query: 397 PGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +++ + + + + + + L + + N Sbjct: 697 GGDEFAILIQSDTSSQSIATLAERIINNICASLSIEEKSLSITASMGIAVYPENSVDSDA 756 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL + + ++ +++ L + +R +L + QP N Sbjct: 757 LLKNSDIALYHAKDQGRNR-YCFFTPQMGIESVQRLQLESDLRKSLGTDQYTFFYQPKVN 815 Query: 514 KE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + +L +G I +P +P++ L ++ + LA + Sbjct: 816 AKTHKVCGIEALLRWKNEEGQIQSPLGIIPILENSGLIVNVGETLINQACEQLAIWQSNG 875 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 F++N+ LL +I + + +P + LEITE ++ + + + +L Sbjct: 876 LDLHFALNISARQLLHSDIVDTVYKAVTMSGCNPHYLELEITESVVMADVKLAFDKLIKL 935 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G +IAIDDFGTGY++ L R I+K+D FV+D+ N I RSI +LA Sbjct: 936 EALGVKIAIDDFGTGYSSLAYLSRFPIHILKVDREFVQDLPMNKDSVTITRSIIELAHNL 995 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + VVAE VE + Q L +GV+ QGY G+P P+ + Sbjct: 996 GMLVVAEGVENEGQIKFLTGIGVEEFQGYYFGKPMPIDE 1034 >UniRef50_B8CTT8 Sensory box/GGDEF/EAL domain protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTT8_SHEPW Length = 710 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 112/662 (16%), Positives = 226/662 (34%), Gaps = 29/662 (4%) Query: 96 VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST 155 + L +++ L S + S+ P Sbjct: 14 LTLSFISVISLCLAIYLYIAKPSLNMTLLFTISLFCLANIAVLSVSSFQLLSITPRVRHL 73 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 ++ + + L L M + LGK Sbjct: 74 TNCVRRWSNGDLNTRNRIGDYGELSYLEVELNHMFSRLQDISAKEHHNQQTILGKNHLLT 133 Query: 216 TLSWLAALSVLLLL-----LCTPYENDFIAGYLVPV------FFIIFTLGVGKLRYPFLN 264 + AA ++ + + + + GY + + + Sbjct: 134 AILDSAAAAIYGVDENGRCIFANPQCVKLLGYRSEEQLIACNMRSLIHQNPDDVNAIVSS 193 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRRW 322 + +F + + + + + L + + Sbjct: 194 IIDQEDKRDDNLKEDHFWRADGSSFPVEYWSHPMTLNDNKMGAVISFHDNSERLESEALI 253 Query: 323 HLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 QA D LT LPN + EQ + L +D+ + ++ G Sbjct: 254 RHQAHYDALTDLPNRFLALRRLEQLVDASARSGKMLAVIFLDLDDFKKINDSLGHEAGDQ 313 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNT 431 + + L+ ++ + + +L G E +++L G + Q + L + + +N Sbjct: 314 LLITAADRLMKATRKEDTVGRLGGDEFIILLDGLSSANDAQPLAENLIGGFRKPFYIDNR 373 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 L + + + +T LL + + ++ + ++++ + Sbjct: 374 QLILTASIGIAIYPNDGKTPSELLRNADSAMYHTKSIGRN-TYSYFTHAMNKEVSRRLAI 432 Query: 492 LNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 I AL++G+L ++ Q + G + +L GI++P +F+P+ Q + Sbjct: 433 EEQIHGALERGELQVHYQIQLDIRDGSIMGAEALLRWDNPVLGIVSPAEFIPIAEQTGVI 492 Query: 549 ARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 +L L+ T R ++NL P N+ I + + P+ + Sbjct: 493 EPMGEFILHRALETALTWQQTFNDEFRVAINLSPRQFRNPNLVQLINDCVNQLGMKPKDL 552 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE S ++ + L K GF I++DDFGTGY++ L+ I+KID F+ Sbjct: 553 ELEITEGVLLSGHAYTLDALMALSKAGFCISMDDFGTGYSSLSYLRTYPFQILKIDRSFI 612 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 KD+ T+ ++ + ++A A + V+AE VETQ+Q L + Y QG+LI +P L Sbjct: 613 KDMNTDDTSKELIIATIEMAHALGIRVIAEGVETQEQFDELSFMMCDYAQGFLISKPVVL 672 Query: 728 AD 729 + Sbjct: 673 DE 674 >UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=2 Tax=Proteobacteria RepID=B8INP3_METNO Length = 794 Score = 633 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 119/747 (15%), Positives = 233/747 (31%), Gaps = 42/747 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + I+ F + L + S + L + +++L Sbjct: 50 VCVAAVAGGSGIWATHFIAMLAFEPGLPSGYDIGLTVRSLAYAVVLTGLGLAVTLL---- 105 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 R G + + A + + LG Sbjct: 106 RRIPFTAGLGGLILGSGIAAMHYTGMAAFEIAGRIIWDPTLVAASLVLGALLGGAALPVA 165 Query: 121 VWQRLFW----LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 + L+ I ++ S + + + + Sbjct: 166 LGPHGVRSQTAGALLLLGAICSLHFIAMGALTIVPDPSIAISETAVPSRWLAVAVALASG 225 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 I + L I +R +L+ A +++ Sbjct: 226 AILLLAGGALALDIRDRRTIVES------------ERLRSLANAAVEGLVVCRDDIIVSA 273 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 + G LV + P A++ + I+ Sbjct: 274 NDSFGRLVGIAATAVAESSLSRFLPDPATRLALTRQSEQLIETELRGAEGEMIPVEVIMR 333 Query: 297 VL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + VR R A D LT L N + Q + Sbjct: 334 PVTYGRRPHFAVAVRDLRARRQAEGRIQFLAHHDALTGLANRTSFTQRLDLELKLAEATG 393 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + CL +D + ++ +G + ++ R + ++ E + + +L G E + L+ Sbjct: 394 RKLAVLCLDLDRFKEVNDLFGHAAGDAMLVNVARVVTGILGETQMMARLGGDEFAV-LAA 452 Query: 408 PETEGRLQHMVNILNSRQIHWNNTGLD---MGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + H+ + + N + + + LL + Sbjct: 453 CDHAITAGHLAERILEA-LRSENADAAGPLVATSIGIALYPDDASERDVLLSHADTALYR 511 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + + E + Q + +L + +R A+ +G++ L QP E G++ Sbjct: 512 AKSEGRG-TYRFFEHKMGVQVRDRRILEHELRHAVARGEMHLVYQPQTQVETGEVIGFEV 570 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 +L + G ++P F+P+ + + VL + A+ P +VN+ Sbjct: 571 LLRWHHPERGAVSPAVFIPIAEESGAILQIGEWVLRQACRDAASWPN---PLAVAVNVSA 627 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + + + + + + P + +EITE + ++ + Q+ G IA+DD Sbjct: 628 VQIHAPHFVQLVHEVLLQTGLKPDRLEIEITETALIRDPVRALSTLRQVKALGVHIAMDD 687 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+ D IKID F++ + TN A IVRS+ L + L V+AE VET Sbjct: 688 FGTGYSSLSNLRSFPFDKIKIDPSFIRAVDTNEQTAAIVRSVLGLGRGLGLPVLAEGVET 747 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 + L QGYL+GRP P+ Sbjct: 748 DAELRFLAAENCDAAQGYLMGRPAPIE 774 >UniRef50_A4X020 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4X020_RHOS5 Length = 875 Score = 633 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 133/743 (17%), Positives = 246/743 (33%), Gaps = 45/743 (6%) Query: 13 IFTLAFTLTVVLIQLSRFISPLA----IIHSSYIFLAWMPLCVMLSILFIF--GWRGVVP 66 I+ F + L+ S L + Y L + L + L F G R Sbjct: 139 IYCALFIACLFLLHFDIKHSVLGPAQTAVAYLYPALWFSVLAFGILSLIFFDHGKRSFPL 198 Query: 67 VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 L + +++ + + + L + L Sbjct: 199 FLLVIGIAAEAVADFWYVRAIMNGTYTPGGMTLLLWLSTTGLVALAAAEHLALIRRAGLT 258 Query: 127 WLGLV----TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 L I +V + F +S FG +L L A + Sbjct: 259 QSALRRRTDAGIAQAALPGIVIAIFMLSGSLSGAFGRNWEYVAFSSVLGLIFAAVAALRE 318 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY------EN 236 + +I S + +R + + +V++ Sbjct: 319 YA----VIRSHEALRTEAEESREEVSLSRRRLAAVLESTSDAVVVFDRSMRVEYFNENAV 374 Query: 237 DFIAGYLVPVFFIIFTLGVGK--LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + G P FT + + A S + Y+ L+ Sbjct: 375 SALEGVGAPGLGASFTEIFPETSFPGALVRFRSAQSRQEPMEYDALLSGPD---RWLSIN 431 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----EAGK 350 + L R R A DP+T L N + ++ E Sbjct: 432 GYP---SNGGLSIFFRDVTEQRTARERMAHLAHHDPMTGLANRMKFSEELQRCVSLETPV 488 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 S + +DN + M+ G + + I R L LM+ +L G E +++ G + Sbjct: 489 SVLLIDLDNFKDMNDTLGHPLGDAVLVEIGRRLQQLMRPGNLAARLGGDEFAMLIFGQQD 548 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 L + + +R I N + + + L+ ++ Sbjct: 549 RIALGAIAERVLARISAPIALPNQTVRVTASMGIAM--DDVANRAELVRTADIALYEAKR 606 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + + + + ++ ++ + AL + +++ QP+ + G++ +L Sbjct: 607 DNRG-TYRFFDGAMEIRLRERTAIIADLTAALGNNEFVVHYQPLYELASHRICGFEALLR 665 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G+++P+ F+P+ L + VL + A P R +VNL P Sbjct: 666 WTHPVRGLVSPEVFIPIAEDTGLIHQIGAWVLRTACTAAADWPA---DVRIAVNLSPRQF 722 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + R+ + + P + LE+TE ++ S++ QL++ G RIA+DDFGT Sbjct: 723 RDLGLPTMVARVLEETGLRPNRLELEVTEAALLDDSGSNLDIFAQLNRMGIRIALDDFGT 782 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+ L++ +KID F+ + + IV +I +A A S+ V AE VET+ Q Sbjct: 783 GYSALSYLQKFPFAKLKIDRSFITGLPDSESSMAIVSAICSMAHALSIRVTAEGVETRDQ 842 Query: 705 QALLHKLGVQYLQGYLIGRPQPL 727 L +QGYLI RP P Sbjct: 843 FDWLQTR-CNEIQGYLISRPVPA 864 >UniRef50_Q1K008 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K008_DESAC Length = 995 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 96/581 (16%), Positives = 198/581 (34%), Gaps = 29/581 (4%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 + R I R A + + Sbjct: 401 IRSIVIDYRGEPCVLTAVRDISERREKDQRLRELSAVVDHSNDAVMIMDDSGNV------ 454 Query: 230 LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L ++GY +F R + +L + Sbjct: 455 LAVNKTFCDLSGYSEEDLLNRLPLFLRAERHDRVFYTDLVKQLRDEGRWEGEIWIRHHRG 514 Query: 287 TEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + + + + + + + + A TDPLT N Sbjct: 515 HSLPQWLRIETVEEPENKTTRYVAVSADLSEEKAWEEKMLQLAQTDPLTGSANRVLFRDR 574 Query: 344 PEQEAGKS---------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 +Q ++ L +D + ++ G + + + L + + + + Sbjct: 575 LQQAIKRAQSRKGMEVQVFSLDLDYFKRINDSLGHVAGDRMLIEVAARLKRVSRGQDTIS 634 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E ++++ E M + S + + L + + G+ + Sbjct: 635 RLSGDEFAILVTCLNDEVDATRMAQKMLQAISEPMMIDGAELIITASIGVALYPGDGDDD 694 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ Q+ + ++ + + + + + +R AL+ +L LY QP Sbjct: 695 VTLMANADNAMHQAKRQGRSR-MCYFSAELADKAQEYLTIESKLRRALENSELQLYYQPQ 753 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HP 567 + + + +L + G ++PD+ +P+ + L ++E + + H Sbjct: 754 VDLATGDIVAAEALLRWHSDELGWVSPDRMIPVAEEGGLIIALGRWIIEECCRTIRGYHR 813 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 +VN+ L+ ++ + + Y I P + LE+TE + ++ + Sbjct: 814 SSGNWFPIAVNVSARQFLEPGFTDELVEIVRFYDIPPSLLELELTESMMLDDVGKAIETM 873 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 + L GF+IA+DDFGTGY + LK+ +K+D FV D+ + DA I ++ Sbjct: 874 KALSFKGFKIALDDFGTGYTSLAYLKQFPVSKLKLDRAFVTDVHRDVNDAAIAEALVTFT 933 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + LS+VAE +E Q L+ +G ++ QGYL RP P Sbjct: 934 RVMGLSLVAEGIEESVQHECLNLMGFRFGQGYLFSRPLPKD 974 Score = 63.1 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 19/290 (6%), Positives = 63/290 (21%), Gaps = 14/290 (4%) Query: 46 WMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHL--SFLQTAVMLGSQTFVVLCACAI 103 W + +++ + + + + ++ + +V+ Sbjct: 149 WRAIALIVLGCVVLSQLMWLFIKRFGLDPLYAGVLREQHYYRSLFDQAQEAILVMSQSGE 208 Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 L R + +K ++ + + D Sbjct: 209 LLRFNNAARRLFKLPETMETGNLRQFHDKTNWLKIRSFIKMIKQQGHHTETAYLPSIDLC 268 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 ++ + + + I + +Q+ + TL + Sbjct: 269 VEILGSQIVLEEQTLIQ----LVILDITEQYHSQLKLKELQEELERSLDEYRTLFDYSVD 324 Query: 224 SVLLLLLCT-----PYENDFIAGYLVPVFFIIFT--LGVGKLRYPFLNLTWAVSTLCLLN 276 + + L + + G L + + + Sbjct: 325 GLTVRNLNGELLLCNKSYEEMLGRTFAELNHQHFTKLCDPQEKSALSEKYREALEGKSIL 384 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQ 325 + + + + V+ C+L VR ++R Sbjct: 385 FEFTYEHKDGHHFPVEIRSIVIDYRGEPCVLTAVRDISERREKDQRLREL 434 >UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0K3_9PROT Length = 1561 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 97/552 (17%), Positives = 198/552 (35%), Gaps = 29/552 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLG 254 ++K A+ +++ ++ + + GY Sbjct: 996 ARRELDEQKKLTTKFFDAASEGLMITDSHQNIIKVNHAFVRMTGYDEADVIGKNPSLLSS 1055 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRI 311 + + ++ + T Y + L + + Sbjct: 1056 GKHEDTFYSAMWQEINQHGWWQGELWNRRKDGTHYLEWLTIHTLRDEHGHLTNYIAIFSD 1115 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + RR D LT LPN L + + +DN + + Sbjct: 1116 ITLIKAAQRRLEYMVAHDELTSLPNRNELRGRMAQTFARAQRHGGTFALMFIDLDNFKNV 1175 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN- 422 + + G ++ + L ++ + + ++ G E ++L +E ++ + + Sbjct: 1176 NDNLGHDYGDVLLQQVAERLGLCVRTEDTVARIGGDEFNVLLDDV-SETQIANTAQRILD 1234 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 S+ + + + + E ++ L Q+ + Sbjct: 1235 HVSKPYLIKEQQVFVSASIGIAVYPKDAEDIETLTKNADSAMYQAKDKGKD-SYQFFTSD 1293 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 + + ++ + N + A+D +L L QP N E G + +L GI+ PD+ Sbjct: 1294 LKEKINHRIEIGNALHKAIDANELKLVYQPEFNLQTGELIGAEALLRWHSSLFGIVGPDE 1353 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR--FSVNLMPLTLLQKNIAGRIIR 595 F+P+ + +L V+E + L VN+ P L ++ + I R Sbjct: 1354 FIPIAEESDLILELGEWVIEQAARQLNLWRKADTPLPGTLFVNVAPRQLARQPLLAIITR 1413 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 +++ + ++ +EITE +++E + ++ IAIDDFGTGY++ LK Sbjct: 1414 QLQKHRLPSGSLGIEITERTLVNSSEDISVKLHKIELEEIPIAIDDFGTGYSSLSYLKSF 1473 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +KI F+ I T+ D I +I ++ A L +AE +ET+ Q +L ++G Q Sbjct: 1474 PISFLKIPNQFIDGITTDESDKGIATAIHGVSVALKLQTIAEGIETEDQLIMLREMGCQS 1533 Query: 716 LQGYLIGRPQPL 727 QGYL+GRP Sbjct: 1534 GQGYLLGRPVDP 1545 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 109/700 (15%), Positives = 215/700 (30%), Gaps = 44/700 (6%) Query: 60 GWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSR 119 G ++ + M T Q V T + + + Sbjct: 259 GLSRLLDAVAAMRSTIRALTLREVSQRRVAEALVTDALQTSREGVVVVDADGRIA----- 313 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 + + I+ + L K D + L + Sbjct: 314 LANAQALRFFVGLDAAIEAGLSLTRIADQPRDKHREVLDDCFRALARDGDIRLADGRWLR 373 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPY 234 ++ + + R + + L + Sbjct: 374 VSRSATRQGGFIAVCSDISVLKEQERRLTQTNLRLDAALDTMSQGLCLYDGQSRLMVVNR 433 Query: 235 ENDFIAGYLVPVFFIIF---------TLGVGKLRYPFLNLTWAVS---TLCLLNYNQNFL 282 I G L + + L Sbjct: 434 RYSEIYGLPPGAVVPGMTALEVLSASLAAGNHPGCDLEALLRQQRDAFSNGAWQTHFQEL 493 Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 ++ A + R A D LT LPN A+ Q Sbjct: 494 S-NGRIVAIDRREAA----DGGFVATYEDVTERRRAEARIAFMAHHDMLTGLPNRVAVGQ 548 Query: 343 APE-------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + ++ G + + +D+ ++ G + + ++ L ++E + + + Sbjct: 549 QIDVAVAQAGRDQGFAVFAIDLDDFRPVNETLGHGIGDELLVAVANRLTACVREIDCVAR 608 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L E ++V G + + + + + +G + Sbjct: 609 LGADEFIVVQRGVDRPEDAAILARRIIEVVGAPYSLTHHTISVGLTIGITLAPSDGSNAD 668 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL ++ A E + + + ++ +R AL + +Y QPI Sbjct: 669 KLLKNAEVALDRGKTEARG-AFRFFEPAMDARLIARRIMERDLRDALAREAFEVYYQPIY 727 Query: 513 NK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G++ +L G ++P +F+P+ + L VL + A P + Sbjct: 728 SLETDRICGFEALLRWNHPVRGFVSPAEFIPIAEELGLIVPLGEWVLRRACEEAARWPDE 787 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + +VN+ + ++ + +R + + + LEITE +N ++ + Sbjct: 788 ---LKVAVNVSAVQFTSASLVTAVREALRRTGLPGRRLELEITETVLVANPGATTAILHS 844 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G R+A+DDFGTGY++ L+ D IKID FV+D+ IVR++ L + Sbjct: 845 LRALGVRVAMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRDLCVKDGTDFIVRAVIGLGAS 904 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ AE VET+ Q A L G +QGYL RP P+++ Sbjct: 905 LGMTTTAEGVETEAQLAHLRAEGCDEVQGYLFSRPVPVSE 944 >UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XX17_LEPCP Length = 790 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 128/726 (17%), Positives = 240/726 (33%), Gaps = 29/726 (3%) Query: 27 LSRFISPLAIIHSSYIFLAW-MPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQ 85 L SP A++ + L + L L L++ W +L T ++ + Sbjct: 32 LFYRQSPAALLGGAIGALLVVLALQDALPALWLRSWLLAAELLIVGRLTTTLHYMHGGAE 91 Query: 86 TAVMLGSQTFVVLCACA--ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC----- 138 + + ++ A + LG T++ L L ++ Sbjct: 92 RHSLARWRQLALVFTIAQGLTWGSLGLMSLAVPTAQDEALILVCLLVIVAGSAALVGTLP 151 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 + + + + S + + L + R I + H A + Sbjct: 152 LLVPLFGVLTLLPITLVMALGSSGAQHFLAFCSFTFMLTVTVSLPRSMQRAIRARHSASL 211 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA-----GYLVPVFFIIFTL 253 R + E+ A + L + + ++ Sbjct: 212 AQRDTLQRLEMAEQMAHVGHLVWDAGAAQAQLSAGAQRMLGLDGVGALEHRDIVELVVPA 271 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYH 313 ++R N + + GV + + L+ ++ Sbjct: 272 DRERVRLLIRNSLQQTQSQLRYETQVSTPAGVRDLMVVQHLETGADGRVTRLMSTLQDTS 331 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKSFCCLRIDNLEFMSRHYGL 369 + R A DPLT L N QA Q + L +D+ + ++ G Sbjct: 332 ELKQTQRELQKLAFNDPLTGLGNRAWFMQALAGMLRQGERSALLMLDLDHFKAINDTLGH 391 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQI 426 + + L ++ + L +L G E ++L + L R Sbjct: 392 HAGDLLLGMAAQRLQRVLGDTASLARLGGDEFAIILPAIASSAAAAQQAQALIDTLTRPF 451 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + + + + LL + S + Sbjct: 452 SVAGVEVYVSASIGIAVSPQDADDTEALLRCADVAMFDAKGLGRA-GYQFYAAQQSERAR 510 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++VLL +R A+++G+L L+ QP + G + +L + G++ PD+F+P+ Sbjct: 511 ERVLLEGDLRRAIERGELELHYQPKVDMRTDRVVGAEALLRWHHAERGMVPPDRFIPVAE 570 Query: 544 QFNLSARFDLQVLESLLKWLATH----PCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 L VL + + + +VNL P + + + Sbjct: 571 DTGLIIPIGEWVLRTACTAATHWNRTRRARGQEALKIAVNLSPRQFWSPHFVAMVRAVMH 630 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 P+ + LEITE + +L + GF +AIDDFGTGY+ L R Sbjct: 631 ETGCRPEWIELEITESLLIDTRGQVSEILAELSRLGFTLAIDDFGTGYSALGYLTRFPIS 690 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV ++ T+ A +VR+I + + L +VAE VET +Q +L ++G Q QG Sbjct: 691 TLKIDRSFVNEVATHPARASLVRAIVAMGHSLQLELVAEGVETHEQVQVLREMGCQLAQG 750 Query: 719 YLIGRP 724 +L GRP Sbjct: 751 WLYGRP 756 >UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIE6_9GAMM Length = 711 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 94/578 (16%), Positives = 198/578 (34%), Gaps = 48/578 (8%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAG-YLVPVFFII 250 +++ + ++ ++ + + G + Sbjct: 130 ITELHEAKKAFQETQQQLAQIIVGNPIASFVIDSRHVITHWNKACEVLTGIPAIEAIGTK 189 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG---------------------VETEY 289 T + + + Q++ + Sbjct: 190 DTWRGFYDHPRPVMANLVLQGALNDDIEQHYGKKFKPSELIPGAFEAQDFFPKMHDG--R 247 Query: 290 SLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 L F A L+ + ++ + ++ QA D LT LPN Sbjct: 248 WLYFTAAPLLDHQGNTIGAIETLQDITEQKEQEKKILHQAHFDSLTDLPNRFLALDRLNL 307 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + +D+ + ++ G + + + L +++ ++ + +L G Sbjct: 308 LTKEARRTRKKLAVLFIDLDDFKKVNDTLGHALGDKLLIQASQRLKSVIRSSDTIGRLGG 367 Query: 399 SELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +++++ + ++ + L + L + + + E LL Sbjct: 368 DEFIVIINNLDEALDVRPIAEKLLDNFRDVFKVESRELLLTTSIGISIYPDDGEEPNVLL 427 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK- 514 S A E ++ +++ + + +AL + + L QP+ + Sbjct: 428 RNADSAMYHSKNQGRN-AYHFFTEDMNAGVQRRLQIEEQMHSALGRNEFSLRYQPVLDLK 486 Query: 515 --EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 G + +L G ++P++F+P+ Q L VLE LK Sbjct: 487 NNRIAGAEALLRWHNPVLGNISPEEFIPIAEQTGLIVPIGYFVLEQSLKAARKWSTTYSN 546 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL PL + +I L + + A+ LEITE N ++L Sbjct: 547 EFTIAVNLSPLQFKDPKLIVKIKELLASHRLEGNALSLEITEGVLLGNQIKVQEAFQELS 606 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G +I++DDFGTGY++ L+ + +KID F++D + ++ + +A A Sbjct: 607 DSGIQISMDDFGTGYSSLNYLREYKFQTLKIDRSFMQDFALDKSAPALINATIAMAHALD 666 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VE Q+Q L + G + QGYL+ +P D Sbjct: 667 VEVIAEGVEEQEQLDYLIRKGCNFAQGYLLSKPLTEQD 704 >UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=A5ETN6_BRASB Length = 1047 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 103/561 (18%), Positives = 190/561 (33%), Gaps = 31/561 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFF 248 R+ + +++ + ++ G Sbjct: 473 EDISEHRKLEQERDRNYAFLREIIDHIPSPIMVKDVQDRRYVLVNKSSERCFGRPCEQIV 532 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNY----NQNFLQGVETEYSL---AFILAVLISF 301 + L + + + ++ Sbjct: 533 GKTLFDLMPRPIAEKAAADDDRALEHADGLVLEEHPWQTPGLGLRYITSRRIVVTDDRQR 592 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAGKSFCC 354 L+ ++ + R A D LT LPN + + Sbjct: 593 PRYLINVIEDTTERRLADERIAHLAHYDALTELPNRVLFRERIAHEIERARHGMFFALLY 652 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L ID + ++ G + +R+I + + + + +L G E ++L+ + Sbjct: 653 LDIDEFKGINDSLGHHVGDELLRTIASRIRSCLAPEDTVARLGGDEFAVLLTMAADRDEV 712 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 V + L + + L + A Sbjct: 713 IAKVTEILERIREPYRCLGHQLSTDASIGIALAPEHGVEIDQLTKHADLAMYAAKADGR- 771 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKY 528 E + +++ L +R A+ +G L+ QP+ G + +L Sbjct: 772 HTFRFFEPAMDESARERLQLQQDLRRAITEGQFELHYQPLLGFRENIMTGCEALLRWRHP 831 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 + G++ P F+PL L V+ + A P R +VN+ P+ L Sbjct: 832 ERGMVPPLDFIPLAEDTGLINEIGDWVMRTACAEAAHWPS---DIRVAVNVSPIQLKSPT 888 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +A + ++P+ + +EITE + + ++ + QLH G RIA+DDFGTGY++ Sbjct: 889 LALHVASALSAAGLAPERLEIEITEAVLIGDDDVALDILHQLHAMGVRIALDDFGTGYSS 948 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR D IKID FV DI ++ IV+++ +A A +++ AE VET QQ L Sbjct: 949 LSYLKRFPFDKIKIDRCFVSDIGADSSS-AIVQAVVSIAAASNMTTTAEGVETGAQQTAL 1007 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +LG +QGYL P+P A+ Sbjct: 1008 RQLGCTEMQGYLFSAPKPAAE 1028 Score = 44.6 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/201 (8%), Positives = 38/201 (18%), Gaps = 22/201 (10%) Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 I + I D + ++ + A +I M + Sbjct: 293 IAAGARVSRFPLTITATRTIDDALADWRSQVVLLVGAATLAAGVIAVMFSLMI------- 345 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFF 248 R G+++R T ++ + G V Sbjct: 346 RQILRQNRIARQQLEGEKQRVETALDNMTQGLISFDADACVVMFNRRFIDMLGLSTDVIR 405 Query: 249 II--------FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 G + A+ + L I L Sbjct: 406 PGVHLTEVIAHCKAQGSFNGDVADFCTAIHDRAAAGGTSQMVIEAGAGRFLNVIDKPLA- 464 Query: 301 FSVCLLYMVRIYHRSEWLNRR 321 + + + L + Sbjct: 465 -TGGWVTTLEDISEHRKLEQE 484 >UniRef50_A4TYP2 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYP2_9PROT Length = 953 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 104/689 (15%), Positives = 204/689 (29%), Gaps = 39/689 (5%) Query: 77 WNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI 136 W S+L IL Q + + Sbjct: 260 WPDGKSYLTGYARAKGTMGSPGLGWIILIHQPVDEAFADAVLFRNQVMIVGFLVAVGAAA 319 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + L + PL D V + + ++L L R++ + Sbjct: 320 WLWLALGRTI--RPLTRIAEIADRIQKGEAVAQIPIIDGRSEAHILSVSLNRLVSTLADR 377 Query: 197 QILWRRDIAPSLGKEKRAFTL----------SWLAALSVLLL-----LLCTPYENDFIAG 241 +R L +A +++ + I G Sbjct: 378 NADLAAANTALEDDIRRREALEQELRLAATYYEASAEGIVVTVADGTIASVNDAFCRITG 437 Query: 242 YLVPVFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + + ++ + + + + + Sbjct: 438 YQRHEVLGKTTSLLKSGVQDDEFYADMWQLLRDTGHWEGEIWNRRKDGRTFPEYLTINAV 497 Query: 299 I--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + + D LT LP + Sbjct: 498 RRDGEITHYVAQFSDLSDRKAAEEKIVQLSTHDTLTGLPKRIVAMERLSGLISEARRDGR 557 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D L ++ G + + L L+Q + L +L G E L++ S Sbjct: 558 LVALIYVNLDGLNRVNDALGHHGGDRVLVETAQRLRQLLQPADALARLGGDEFLIISSRF 617 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + S+ + + + + E L+ + ++ Sbjct: 618 MVMAEAEALARQILDACSQAFFVDEKDTYLTARIGIAFYPRDGEDPLELIRNSHAASVRA 677 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL-DQGDLLLYAQPIRN---KEGEGYDE 521 + + + L +R A+ ++ QP+ N G + Sbjct: 678 KEQGGN-IYRIFTRDMDDEAVARHALDAELRQAMNSDDQFKVFYQPLVNAQSGRIIGAEA 736 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLM 580 ++ G++ PD+F+PL L ++L + A +VN+ Sbjct: 737 LVRWFNPTRGLVPPDRFIPLAESNGLIVPMGRKILATACADGARFRKHIGSDFFMAVNVA 796 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + + + P + +EITE N + + L + +++ID Sbjct: 797 AAQCADPGFLETVSKCLSDAKLPPHCLEVEITERTVVGNNPTITAFMTALREAESKLSID 856 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY+ L++ +KID FV I D +V +I +A A L V+AE VE Sbjct: 857 DFGTGYSALSYLRQYPFTTLKIDRSFVMGIGDVEQDDALVLAIIHMAHALGLEVIAEGVE 916 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T +QQ L G + LQGYL+G+P P + Sbjct: 917 TTEQQEFLRDAGCETLQGYLLGKPMPADE 945 >UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alphaproteobacteria RepID=B7KRA3_METC4 Length = 954 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 128/764 (16%), Positives = 251/764 (32%), Gaps = 57/764 (7%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 FT + +A IF + + + + + + V PV + Sbjct: 181 FTAGDGFSYRQTARADVARDVRLSIFATSLAIVLSGIVALLLLRQIVRPVADASTVASRI 240 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 ++ + +L A A++R + + + R Q L + I Sbjct: 241 AAGELTVRVPEGGDDEFGALLRAMAVMRDNIAAMMQEEVAQRRSAQSLLADAVQGSIEGI 300 Query: 138 CSMYLVGSFFD------------------FPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 + G PL + ADA+ + +L Sbjct: 301 VVVDAGGRIVLANARAAALLGIDQAEPGHRPLSDTRGSAVADALLAMPGHATLTAETHTA 360 Query: 180 NMLFYYLTRM------IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 + + ++R V+ L + + + L Sbjct: 361 DGRWLRISRSPTREGGFVAVCSDVSLLKEQEDQLKRSNAQLDAALSNMLQGLCLYDAEGG 420 Query: 234 ---YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET--- 287 Y F + V + + + + + + + LL + LQ + Sbjct: 421 LLVYNRRFCDMFGVDAAALRPGMSIRDVARLVEASSDSGRAIDLLVEQEALLQRGLSASL 480 Query: 288 ----EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 L + + + R A D LT L N + Sbjct: 481 CCPIRTDCIVALKQQPTAEGGWIATYEDVTQRYEAEARIITMARKDALTGLANRMVFGER 540 Query: 344 PEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 E+ AG + CL +D + ++ G + +RS+ L +++ + + Sbjct: 541 LEEAAARLDEGAGAGFATLCLDLDRFKEVNDTLGHPIGDGLLRSVAERLQGCLRDTDLVA 600 Query: 395 QLPGSELLLVLSGPET----EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 +L G E +V +G + + L + + + + +G + Sbjct: 601 RLGGDEFAIVQAGVQAGTHARRDASALAKRLIAAFQQPFLLDGHTVTVGLSIGISLAPEH 660 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + + LL ++ A +E + + K+ L + ++ A+ G+ L Sbjct: 661 GTSPEKLLKSADLALYRAKATGRG-CWAFFDEEMDVELRKRRALESDLKKAVGNGEFELV 719 Query: 508 AQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + +L + G ++P F+PL + VL A Sbjct: 720 FQPIVKLDRQRIASCEALLRWRHPERGYVSPADFIPLAEETGTIGEIGEWVLRKACSEAA 779 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 T P R +VN+ + ++ + + LEITE +++ +++ Sbjct: 780 TWPS---NIRVAVNVSAAQFKNAAVVRAVMDALAASGLPAHRLELEITESVLLNDSVTTL 836 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L + G R+A+DDFGTG+++ L+ D IKID FV+++ +IVRS+ Sbjct: 837 ATLHTLKRLGVRVAMDDFGTGFSSLSYLQSFPFDKIKIDQSFVRNLAAPGNSRLIVRSVV 896 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L ++ ++ AE +ET+ Q L G QGYL RP P A Sbjct: 897 GLGRSLGITTTAEGIETEAQLEQLRLEGCDEGQGYLFSRPVPSA 940 >UniRef50_Q2W603 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W603_MAGSA Length = 962 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 104/668 (15%), Positives = 213/668 (31%), Gaps = 42/668 (6%) Query: 102 AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDAD 161 R + ++ + + I ++L PL+ + +A Sbjct: 282 GWAVIATIPTSVAFAPIRRLEFEIYQDAALASVIIAVLLWLFVRRQLRPLEHAAGMLNAM 341 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 A + + + + R + S Sbjct: 342 ATGSRPLSPLPVEGGPEIRQMLDSFNKFHERIKAQKQSLRDNAEQLQLAASVFDGTSEAI 401 Query: 222 ALSVL-LLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 A++ L++ + GY + + + +++ + Sbjct: 402 AITDAEGLIVSVNKPFCRLTGYELEELVGRNPNILKSGRHDSDFYAEMWRSITATGNWSG 461 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + Y ++ + + + + + QA D LT L Sbjct: 462 EVWNRRKNGEVYPERLTISTIYDAKGQIQRRVAIASDITEQKKAEEIIWHQANHDLLTGL 521 Query: 335 PNFRALEQAPEQEAGKS---------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 PN R ++ ++ + +D + ++ G + + + R + Sbjct: 522 PNRRRFLDLLRKDLARADSLPDMVVGVLLIDLDRFKEVNDTLGHAIGDQLLLEVARRIRS 581 Query: 386 LMQENEKLYQLPGSELLL-VLSGPETE--GRLQHMVNILNSRQIHWNNTGLDMGYGAAWG 442 + E + + L E ++ ++ T + ++ + + L + Sbjct: 582 CLSEKDVIGHLGADEFIVSMIDDLSTTRLEAAVAAIRMVIAEPFRSGSDTLHLTASIGIT 641 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + ++ LL + ++ + E + ++ L N +R AL +G Sbjct: 642 AYPTDGGDMEELLRNVDQAVREAKNGGRDRS-CCFTESMREAGQTRLQLANDLREALSEG 700 Query: 503 DLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 +Y QPI + + +L + G ++P F+P+ + L V Sbjct: 701 QFEVYYQPIIDMPSRAIVKAEALLRWRHPERGFVSPTIFIPIAEETGLICDIGNWVFRQA 760 Query: 560 LKWLATHPC---------------DKKG----PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +VN P + Sbjct: 761 AATARRLCDSCRYVVGGICRKDDIAGPSTPCRFQIAVNKSPRQFFSGFSHLEWAEHLREL 820 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 +ISPQ + +E+TE M + + G +IA+DDFGTGY+ LKR D I Sbjct: 821 NISPQCISIEVTEGLLLGQHAEVMERLTKFRAAGMQIALDDFGTGYSAMSYLKRFDIDYI 880 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+D+ ++ D I +I +A + VVAE +ET++Q ALL G + QGYL Sbjct: 881 KIDQSFVRDMTVDSSDRAIAEAIIAMAHRLGMKVVAEGIETEEQYALLAAAGCDFGQGYL 940 Query: 721 IGRPQPLA 728 +P P+ Sbjct: 941 FAKPMPVD 948 >UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1Z2_9GAMM Length = 570 Score = 632 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 180/449 (40%), Gaps = 36/449 (8%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + R A DPLT LPN R+ + + + + +D+ + ++ Sbjct: 108 LKRQEDRLRYLAYYDPLTSLPNRRSFNEQLNRILKRCRRHKTNAALLFIDLDHFKRINDS 167 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKL-------------------YQLPGSELLLVLSG 407 G + I + L ++E++ + +L G E +VLS Sbjct: 168 IGHGRGDRLLVEIAKRLTVELREDDAINYYSDNSAEDDSNNSNTEIARLGGDEFTVVLSD 227 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 G+++ + + S I + + F + E L+ Sbjct: 228 IPNAGQVERVAQRILAALSEPIALQSHNPVVTPSVGIALFPQDGEDPDTLVRNADTAMYA 287 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A +E ++ + +Q+ + +R A+ +L L QP + + + Sbjct: 288 AKAQGRA-CFRFYDEEMNAKAVEQLKMEEELRDAMQNNELELRYQPQVDTATGDVVSMEA 346 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ G+++P F+P+ + V++ + + R VN+ Sbjct: 347 LVRWKHSTRGMVSPLDFIPVAERTGQIIELGEWVMKEVARHCNYWDSMGLPPFRVCVNIS 406 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 PL Q ++ I + + + LE+TE ++A++++ ++QL G +A+D Sbjct: 407 PLQFNQSDLPRSIGEFLRESGMQASRLELELTESAIMTDAQTNIEKLQQLKALGLELAVD 466 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR D +KID FV D+ T T A IV +I L+K +L V+AE +E Sbjct: 467 DFGTGYSSLSYLKRFPIDTLKIDQSFVADLGT-TDGAAIVDAIIALSKTLNLRVIAEGIE 525 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q L G LQGY RP D Sbjct: 526 EKEQLDYLVARGADLLQGYFFARPIYPED 554 >UniRef50_B1XK84 Two-component response regulator (ABC transporter) / (GGDEF domain protein) n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XK84_SYNP2 Length = 868 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 113/609 (18%), Positives = 221/609 (36%), Gaps = 47/609 (7%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV--SPHFAQILWRRDIAPSLGKEKRA 214 + + F + L + F ++++Y + ++ S + L ++R Sbjct: 249 WLEPPETFNWLSLQNFFFSLIVYLPFLFLGWFILRNYSLKKEIKRRNQIETNLLESQQRY 308 Query: 215 FTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF--LNLT 266 L+ ++ + + Y +A + V + Sbjct: 309 ANLANTVSIGIFRTNLRHECIYVNDYYCKLLAIQPEEALHKGWLEKVYPDDIDYVREQWL 368 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWH 323 +++ L F + + + + + + ++ Sbjct: 369 KSITNQELFTLEYRFQRSDGSILWVYGQGTAELDSKGEPQGYVATITDISTRIKMEQQLK 428 Query: 324 LQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVH 374 AL D LT L N L + + L +DN + ++ G ++ Sbjct: 429 HDALHDRLTGLANRNLLIERLNLALKRYKRYPIHEFAALFLDLDNFKVVNDSLGHVVGDE 488 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNT 431 + + L +++ + +L G E +++L H+ + + + +N Sbjct: 489 LLIEVAHLLKSFIRDTDVAARLGGDEFVILLEEIHGVEDAVHIADRILNALNMPFQISNY 548 Query: 432 GLDMGYGAAW--------GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 D E+ Q LL ++ + + + Sbjct: 549 --------GVFITTSIGIIIGDSRHESAQDLLRDADIAMYRAKQNGKSQ-YAIFDPQMHL 599 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLP 540 Q +++ L IR+A+++ +LY QPI N E EG++ ++ G+++P +F+ Sbjct: 600 QAMQRLQLEGEIRSAIEEKQFVLYYQPIINLEQGNIEGFEALIRWQHPQRGLLSPYEFID 659 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + L +L++ + L K + VNL L + + RL +R Sbjct: 660 VAEETGLIIPLGEWILDAACRQLFEWQQAFKTPLKVHVNLSVKQLQDS-LLFSLDRLLER 718 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 Y + P + LEITE N + + + Q+ G I++DDFGTGY+ L +L D Sbjct: 719 YPVFPNTLGLEITESMLIQNIDITCRLLNQIRLKGVFISVDDFGTGYSCLSYLHQLPIDA 778 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV N + +I SI L+K+ + VAE +ET+QQ L Q+ QGY Sbjct: 779 LKIDRSFVNISELNDRNRVIAESILALSKSIGIKTVAEGIETKQQYQWLKSQDCQFGQGY 838 Query: 720 LIGRPQPLA 728 L RP L Sbjct: 839 LFSRPVSLD 847 >UniRef50_A0LBX0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0LBX0_MAGSM Length = 1134 Score = 631 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 107/598 (17%), Positives = 216/598 (36%), Gaps = 41/598 (6%) Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-- 228 +L A T + + A + + K + A ++++ Sbjct: 527 ALKMANDHLESQVAERTEDLTQANQALQQEVAEHQLTQAKLFLVNQVFEKARQAIVITDH 586 Query: 229 ---LLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 +L + + G+ + + ++ + Sbjct: 587 NNKILDVNPAYEALTGFQKQQVVGHDPAVGKSGRHDPAFYARMWRSLLSENHWEGEVWDR 646 Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + Y + ++ + M + + + DPLT LPN Sbjct: 647 RSDGSIYPKYLSIDRVLDRQGSVLNYVAMFQDLTEQKATEEELERLSHYDPLTGLPNRAL 706 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ--- 388 + + +D + ++ +G + + + + L L++ Sbjct: 707 FRNRLEHEFLVARRHNRSVALVLINLDRFKQINDSFGFTVGDRLLAMVAKRLEQLVRKTD 766 Query: 389 -----------ENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLD 434 +++ L +L G E ++L+ + L + Sbjct: 767 LIARQENRQERDSDTLSRLGGDEFSIILAELRAAEDAAIVARRTVALLEEPYDIEGQEVF 826 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 +G + N E+L ++ ++ E ++ + +QV L Sbjct: 827 LGGSLGVSIYPENAESLNGMIQCAERALVKAKEGGRN-TFRFYSEEMNRHSAEQVRLETE 885 Query: 495 IRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R A+ Q L+ QP E EG + ++ + DG + +PD F+PL + L Sbjct: 886 LRRAVMQERFQLHYQPKLEIATGEIEGVEALVRWPRRDGRMFSPDAFIPLAEETGLIVPL 945 Query: 552 DLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 +L+ + + + R +VNL Q+++ ++ + + Q + LE Sbjct: 946 GRWILKQACADVVAINAQRVRPLRVAVNLSAKQFQQEDLEQMVLEALEETGLETQLLELE 1005 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE + + ++ + L G ++IDDFGTGY++ LKR D +KID FV+D+ Sbjct: 1006 LTESMMMGDVDEAINTMSILKGLGLTLSIDDFGTGYSSLSYLKRFPVDALKIDQSFVRDL 1065 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ DA IV ++ +L ++ + VVAE +ETQ Q L +L QGY I RP PLA Sbjct: 1066 ERDSEDAAIVHAVCNLGESLGMKVVAEGIETQLQMDFLRQLNCDTGQGYFIARPMPLA 1123 Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 25/281 (8%), Positives = 57/281 (20%), Gaps = 17/281 (6%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 + G+ LQ R R Sbjct: 259 FPLLAEGLAALQSVQTGGRSLQREDGEHLVHMAWYTVGQAGRGADV--GVIYRLPRQAVL 316 Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 F + + I ++ +V S + L Y Sbjct: 317 GAFDALVQRSLWINLALVMVALLGSALFAGSVTRPLRHLAQVISGYGRGEHLPLQYTERS 376 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDF 238 + ++ + + +E+R +L A +L++ Sbjct: 377 DEVGQIGETFLEMRQAIEARTQALEEEEQRLNSLFESAVDGILIIDAKGIIQRYNAGACK 436 Query: 239 IAGYLVPV-------FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + GY + +G + L + + + + + Sbjct: 437 LFGYTSKEALGKNVSLLMQDVVGQEHDLFITRFLQEGGTRVVGNSREVEARHKDGSALPV 496 Query: 292 AFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 ++ + + WL A D L Sbjct: 497 QLSVSHFKYAGEDYFTGICHDLRHQHWLQSALK-MAN-DHL 535 >UniRef50_Q1N484 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Bermanella marisrubri RepID=Q1N484_9GAMM Length = 1215 Score = 631 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 104/568 (18%), Positives = 203/568 (35%), Gaps = 30/568 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTL--SWLAALSVLLL-----LLCTPYENDFIAG 241 I A L + + A+ +L+ ++ I G Sbjct: 617 DIAIIEKASKLVSITMEKHDADNRLMQAANVFEHASEGILITDIDGEIIDVNKAFTQITG 676 Query: 242 YLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 Y + + ++ + + +++ ++ + Sbjct: 677 YSKEDVVGKNPRILSSGKYEQETYEDIFSTLENIGQWKGEIWNKDKKGNLFAVLESISTV 736 Query: 299 ISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---- 351 S + + + + A D LT LPN L +Q + Sbjct: 737 YDDSGKPRNYIALFNDITNIKSHQEQLENLANYDSLTQLPNRTLLTDRMQQAMALAKREG 796 Query: 352 ----FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + +D + ++ YG + + + + + L++ + L +L G E + +L Sbjct: 797 HLLVVIFIDLDGFKPVNDRYGHDVGDRLLIAFSKRVSLLLRSTDTLGRLAGDEFVTLLPN 856 Query: 408 PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE-TLQPLLGQLSWLAE 463 + + ++ + S + + L + + ++ LL Q Sbjct: 857 VQQFENCEPLLERILSAVEKPFIIDEHQLKISASMGVTVYPQAEDLDADQLLRQSDQAMY 916 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + + L I+ A+ + +L+ QP N E G + Sbjct: 917 LAKQDGKNR-YHLFDATQHQLMRDHHENLVRIQEAIKNKEFILHYQPKVNLRSGEVIGVE 975 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ D G++ P FLPL+ +F V+ L ++ S+N+ Sbjct: 976 ALIRWQHRDKGLLPPGSFLPLLDNHPAMIQFGKWVMHEALNQISVWQKQNLNLNVSINID 1035 Query: 581 PLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 P+ L + + + ++P + LEI E A + I + H G ++ Sbjct: 1036 PMHLQSPDFISDLESALHNFPDVNPSFLELEIVETAAIEDINVVSDTINRCHDLGVHFSL 1095 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL ++KID FV+DI+++ D IV+ + LAK+ + + +AE V Sbjct: 1096 DDFGTGYSSLTYLKRLPIHVLKIDQSFVRDILSDPDDLAIVQGVLGLAKSFNRTAIAEGV 1155 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ETQ+ LL +LG + QGY I RP Sbjct: 1156 ETQKHGELLLQLGCELAQGYGISRPIEA 1183 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 34/149 (22%), Gaps = 23/149 (15%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFII----FTLGVGK 257 +R ++ A V++ + I GY + + G Sbjct: 348 LTRPLRRIMQVASEATDGVIITDVKGNIEWINRALTKITGYTLAEMKGLKPGKLLQGPDT 407 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHR 314 ++ + + + I L S + + + R Sbjct: 408 DPEVVQRISEGLRNKQHFKEVILNYTKSGDPHYVEIICNPLRSDNGNLSGFMALQRDVTH 467 Query: 315 SEWLN----------RRWHLQALTDP-LT 332 L +A TD LT Sbjct: 468 QIQLEKLEAFSSHILETIAKKASTDQILT 496 >UniRef50_Q2G9J7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Sphingomonadales RepID=Q2G9J7_NOVAD Length = 769 Score = 631 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 110/739 (14%), Positives = 244/739 (33%), Gaps = 34/739 (4%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT----NL 76 + L+R + H+ L + + GW ++ + + Sbjct: 19 GLQYSSLARLTFARLMAHAVAALLVLQTFGGRVHPALLVGWMALLVSVLISGARFDRSLV 78 Query: 77 WNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI 136 + + + + + + L + + +W L L + Sbjct: 79 DADRRRVSRQEMHRQTISSLFVALAWALPMLVFGPFGDAAGRMTLWTVLAMLMTGMAVTF 138 Query: 137 KCSMY--LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 ++ S ++ F + + V + + + + V+ Sbjct: 139 AAMPMATVLFSGVVGVSAVAAFLFEGEYTAAAVSTVFVVIVSVGAVEVARTFLGARVAEA 198 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYLVPVFF 248 E+ W + + + + + G + Sbjct: 199 GMAEKSEVVSLLLREFEEGDADWLWQVDANRRIRSVSPRFAFALGADPEDLEGKPLIQVI 258 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY- 307 G +L + + + + + + + Sbjct: 259 AGPAWEDGHFHSSLHDLAERLKRRESFSNLLVRATLHGSHRWWELSASPKVDDNGTFVGF 318 Query: 308 --MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRI 357 + + A D LT LPN L +A + +F + + Sbjct: 319 RGVGSDVTEQRESAEKIAYLARYDTLTGLPNRLMLTEALGDAMGYSEKWRSNCAFLMIDL 378 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G ++ + + + ++++ E +L G E +V+ R+ + Sbjct: 379 DRFKAVNDTLGHLVGDQLLAMVSDRMTRIIKDGEVCGRLGGDEFAVVVRDVADSQRIAEL 438 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + S+ ++ L +G + T++ LL ++ + Sbjct: 439 ADAIIATLSQPYEVDHHMLYVGASVGSAIGPRDGATVETLLRNADLALYRAKDEGGG-SH 497 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGG 531 + E + ++ L ++R AL++ + L QP+ + ++ +L + G Sbjct: 498 CTYEPALHAHAEERRKLEFSLRHALERSEFGLVFQPVVDATSEAVVSFEALLRWNSEEHG 557 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 ++P KF+PL L VL + P + +VN+ LL A Sbjct: 558 SVSPAKFIPLAEDTRLIVPIGEWVLRMACQEAMNWP---PHVKIAVNVSGEQLLDPYFAE 614 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ + P + +E+TE +A + +E L G +A+DDFGTGY++ Sbjct: 615 TVVGALAASGLPPHRLEIEVTESIFVRDATVAQMTLENLMGIGCGVALDDFGTGYSSLGY 674 Query: 652 LKRLQADIIKIDGVFVKDIV-TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L++++ IK+D FV+ N IVR++ +A + +S AE VET+ + + + Sbjct: 675 LRKMRFSTIKVDRSFVQGAAKDNPESLAIVRAVVAMADSLDMSTTAEGVETEAELETIRR 734 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG + +QGY GRP AD Sbjct: 735 LGCKKIQGYYFGRPMSAAD 753 >UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V294_9PROT Length = 1157 Score = 631 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 106/617 (17%), Positives = 204/617 (33%), Gaps = 49/617 (7%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + L + + L AV + + R A R Sbjct: 542 VHVPRSVGILVRLANEKNWLFLLLAATGSMLIIAVSVVVIYLRDSLR-------AAADLR 594 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKL 258 +E T + + + GY Sbjct: 595 VSATAFDAQEGMFVTDAEGV-------IQRVNNAFTQLTGYSASEVIGQTPRLLSSGQHD 647 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRS 315 + + +++ + Y + + S + S Sbjct: 648 AVFYALMWQSINETGKWAGEIWNRRKNGEIYPEYLAITAVKDESGVVNNYVATFNDISDS 707 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALE------------QAPEQEAGKSFCCLRIDNLEFM 363 + L A D LT + + + +DN + + Sbjct: 708 KAATNEIQLLAFYDALTG----LPNRRLLLDRLLQALASSVRSNRMGALLLIDLDNFKTL 763 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMV 418 + G + +R + L ++ + + +L G E +++L ++ + Sbjct: 764 NETMGHDIGDLLLRQVAERLTACVRNGDTVARLGGDEFIVMLEEIGAQTVDSVTHTTTIA 823 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + F G Q++ L+ Q+ Q+ L Sbjct: 824 EKILNSLNLPYRLEKHECHSTPSIGATLFSGTQQSADELMKQVDIAMYQAKQAGRN-GLR 882 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIM 533 + + + + L +R AL + L+ Q N G + ++ + G++ Sbjct: 883 FFDSKMQDAISARASLEADLRVALINSEFQLHYQIQVNSLGAALGAEVLIRWMHPQRGMV 942 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAG 591 +P +F+PL + L VL++ L + +VN+ Q Sbjct: 943 SPAQFIPLAEESGLILPVGEWVLKTACHQLKVWQDNALTRELTLAVNVSSKQFRQAEFVE 1002 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + + + +P + LE+TE N + + + +L G +IDDFGTGY++ + Sbjct: 1003 LVKKTLQSSGANPSLLKLELTESLLLENIDEIIAKMNELKLMGIHFSIDDFGTGYSSLQY 1062 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 +KRL D +KID FV+DI+ + DA IV++I ++ A L+V+AE VET++Q+A L Sbjct: 1063 IKRLPLDQLKIDQSFVRDIMDDNNDAAIVQTIIAMSDALGLNVIAEGVETREQRAFLDSH 1122 Query: 712 GVQYLQGYLIGRPQPLA 728 G QGYL +P PL Sbjct: 1123 GCHTFQGYLFSKPIPLE 1139 Score = 78.5 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 18/192 (9%), Positives = 49/192 (25%), Gaps = 8/192 (4%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL---- 56 +L + I+ + F + + S + S + L + L Sbjct: 61 LAGGSLCLGVGIWAMHFIGMLAFNLPCSSSYDARLTLLSMVPGILASMLALSLISRHDIS 120 Query: 57 ---FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 + G + + M + + + + +++ + Sbjct: 121 NLKLVAGGVLLGSGIGAMHYAGMAAMRIDGMIRYDVRLFLISILVAVVLAILALWINFRL 180 Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 S + F+ L+ + + Y + F + A + + L Sbjct: 181 NARRSVWSRWSAFFSALIMGLAVSGMHYTAMAAAYFIRVETPAGSSAGMSPNFLTGIVLA 240 Query: 174 TAVLIYNMLFYY 185 + LI + Sbjct: 241 ASGLIIIVTIVA 252 Score = 49.2 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 24/335 (7%), Positives = 71/335 (21%), Gaps = 30/335 (8%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 V ++ I + + + + S + + L + ++ Sbjct: 124 LVAGGVLLGSGIGAMHYAGMAAMRIDGMIRYDVRLFLISILVAVVLAILALWINFRLNAR 183 Query: 61 WRGVVPVLCG--MFCTNLWNFHLSFLQTAVMLG----------------SQTFVVLCACA 102 L + + A T +VL A Sbjct: 184 RSVWSRWSAFFSALIMGLAVSGMHYTAMAAAYFIRVETPAGSSAGMSPNFLTGIVLAASG 243 Query: 103 ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA-D 161 ++ ++ R + + + C +L ++ + + + Sbjct: 244 LIIIVTIVATFVRKSNLLSLGRAYKTIALFIVIWTCMAWLGADYYYSRRANNLYQQEVQI 303 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 A ++ + + V A + + +L A Sbjct: 304 ATQQAENIAFSINENIELLKGISRVFTRDVELREALHSNLQIKRGMNVFGELNRSLQISA 363 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + D IA +G + A + + Sbjct: 364 LNLGADNIFVLNARGDCIAAANAGE--PASPVGTNFADRAYFPEVKAGKSGRQYAVGRT- 420 Query: 282 LQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHR 314 + + + + + + + R + Sbjct: 421 -----SNVPGLYYASPIFENGRFLGAVVVKRDITK 450 >UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QR24_9BACI Length = 842 Score = 631 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 126/753 (16%), Positives = 265/753 (35%), Gaps = 45/753 (5%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 +VV + + + + L + + F R + Sbjct: 80 LWYSVVFLIVGIIDLLHTLSYKGMPGLIVVESSPQKATWFWVAARLTQACMLFFIIFFPD 139 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRY--GLTSRYVWQRLFWLGLVTPIG 135 S + + + S +V++ + I+R++ G + + L ++ ++ Sbjct: 140 RQVQSRQKKTMFIFSVLYVLVISYIIIRYEQKLPILVVDGKGTTNLKNFLEYIIILFYAS 199 Query: 136 IKCSMYLVG------SFFDFPLKISTFFGDADAIFT---VVDLLSLFTAVLIYNMLFYYL 186 + + D L V DL + + Y++ Sbjct: 200 TAYMLLCSYKKQPKKAHLDLILAFVFLILSEFLFTLYKNVYDLQNFLGHLYKGISYIYFM 259 Query: 187 TRM-IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIA 240 + I + ++ +EK T++ V++L + E + + Sbjct: 260 KGIYIATIKEPYDAQKKAEEELKKREKYLKTITSSLGEGVIVLDKDKKITFINQEAERLL 319 Query: 241 GYLVPVFFIIFTL-----GVGKLRYPFLN--LTWAVSTLCLLNYNQNF-LQGVETEYSLA 292 GY G L ++F ++ T +A Sbjct: 320 GYQKNELLGKALFQKIHCGSEHQCDSLRECPLCQTAELKKAYRVEEDFFVRKDGTLLPIA 379 Query: 293 FILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 ++ +I + ++ + R + + + QA D LT LPN R L + Sbjct: 380 YVSTPMIDDNGEVIGSVIVFRDITERKKYDEKIKYQAYHDALTDLPNRRYLIEKLKNELK 439 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 E + + L +DN + ++ +G +M ++++ + L ++ + + +L G E Sbjct: 440 KAEEHNSRIAILYLDLDNFKNINDSFGHVMGDLLLKNVAQRLT-MIHPDCFIARLGGDEF 498 Query: 402 LLVLS--GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++LS E + ++ I N + + + + + L+ Sbjct: 499 AVLLSGNDFNIEEIACKTIQS-LNQPIKLENKEVFITTSVGISVYPKDGDDEMTLIRHAD 557 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 + + Q ++ + +RTA+++ ++ L QPI + K+ Sbjct: 558 MAMYDAKKKGKNQ-FSFYTAELEQQKIRKSKIEQLLRTAIERKEVSLCYQPIIDTVSKQI 616 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRF 575 G + + + G + ++F+ + + +L++ L+ L Sbjct: 617 IGLEALARWNHPEIGDIPANEFIAVAEENGQIVSLGKHILKTALQHLKQLHEIGFDYLYV 676 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 SVNL L I +L ++ + + +EITE A S+ + ++NI++L G Sbjct: 677 SVNLSLRQLRHHEFTALISQLLQKNKLQASHLEIEITEHIALSDEKCVIHNIQELKDIGV 736 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 RIAIDDFG G ++ L+ D +KID F+ D+ TN A + ++ A +L VV Sbjct: 737 RIAIDDFGVGCSSIGYLRTFSVDTLKIDKSFIFDVATNPNTAQLTSALITFAHNLNLQVV 796 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE+ +Q L + +QGYL P Sbjct: 797 AEGVESAEQLCFLEQHHCNKIQGYLFSPPVSFE 829 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 631 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 118/647 (18%), Positives = 215/647 (33%), Gaps = 34/647 (5%) Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF-TVVDLLSLF 173 L L L + + P+ ++ G + F + + F Sbjct: 37 ALRGEVWDVALLSCSLAELPAAEAIVLFREHAPRMPVILTIERGAQEFPFELLENGACDF 96 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWR-----RDIAPSLGKEKRAFTLSWLAALSVLLL 228 L + R + ++ + I R F L+ L Sbjct: 97 VFKSNPARLLAVIERECANVKLSREEQQVLVSPERIEQIDQGVARFFQLASNTPECYWLT 156 Query: 229 LL------CTPYENDFIAGYLVPVFFII-FTLGVGKLRYPFLNLTWAVS--TLCLLNYNQ 279 + I G V + + AV L L+ Sbjct: 157 DAATQRVTYVSAGYEKILGRHVEALYADSHDWLNYVHPEDQDRVLAAVRTYRLGGLDAKF 216 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + + L + ++ + + A D LT LPN Sbjct: 217 RVRRPGDVQCWLHARNFPVRDEEGNIVSVGGVATDITSLLADQWKSPYFAHFDALTALPN 276 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 ++ S + ID +++ G +R + L ++ Sbjct: 277 QLMFYDQVKRMIALSKRKDLPLSLMVVDIDRFRQLNQTLGHASGDELLRQVAGRLSGSLR 336 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFD 445 E++ L +L ++L + + + + + G + Sbjct: 337 ESDILGRLGTDVFGILLPDVADTHQASIVARRIIDTMIMPVRVAGQDVFATAGVGIVFYP 396 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ + + + ++ L +R A + + + Sbjct: 397 QDGNDVHELVTNAGIAGRHAKNLGRN-SYQYYFPGMHEGARDRMFLEIDLRHATLRNEFV 455 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + G + +L + GI++PD+F+PL+ + L + VLE + Sbjct: 456 LYYQPKASCADGRITGVEALLRWQHPERGIVSPDQFIPLLEETGLIVQVGRWVLEEACRQ 515 Query: 563 LATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 SVNL L + + + ++ ++ + LEITE NA+ Sbjct: 516 AVEWQAAGLNIPSVSVNLSARQLQAETLLTDVAATLEKTGLNAACLDLEITESMLMDNAD 575 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 ++ + L K G I++DDFGTGY++ LKR D IK+D FV+DI ++ DA I R Sbjct: 576 MAIQTLSALKKMGVTISLDDFGTGYSSLAYLKRFPLDAIKVDRSFVQDIAADSDDASITR 635 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +A L VVAE VET +Q ALL +QGY RP P + Sbjct: 636 AVITMAHHLKLKVVAEGVETPEQLALLISHQCDVIQGYFFSRPMPAS 682 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 631 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 106/515 (20%), Positives = 208/515 (40%), Gaps = 24/515 (4%) Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + + IA ++ L P L A + N + + E Sbjct: 161 IAAVRSQGLIIAAVAGSGGILLALFISHSLTVPLNQLIKATHRITTGNLSYRIHLKNKDE 220 Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--- 345 + F+LA + L + + N + D LT L N + Q E Sbjct: 221 F---FLLAKEFNQMSDWLE--ETLKKYQENNAKLQHDLFHDNLTGLANRVYILQEIEAEI 275 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 Q+ + L D + ++ G + + +I + L +++++ +L G Sbjct: 276 KEKKANQDHCFAVLFLDCDRFKVINDSLGHDVGDEVLINIAQRLNLCIRKHDIAARLGGD 335 Query: 400 ELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++++ ++ + + + S + N L + N E LL Sbjct: 336 EFVILIKNLSDIKQVTQIADRILKQMSEPLILENQQLVITMSIGVVVSQENYENADDLLR 395 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 + + ++ Q +++ + +++R AL++ + LY QPI + Sbjct: 396 DADITMYHAKQQGKAQ-YAIFKPIMHTQALERLEVESSLRKALEKQEFYLYYQPIISFKT 454 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-- 571 + G++ +L G ++P F+P+ + L VL+ ++ Sbjct: 455 SQLIGFEALLRWHHPTQGWISPATFIPIAEETGLIVSLGQWVLQEACHQISIWQSHFPFS 514 Query: 572 -GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + SVN+ L Q + ++ ++ + I + LEITE +N ES+ + ++ L Sbjct: 515 EPLKVSVNISSFQLNQMDFVEQVKKVLEESKIKASQLNLEITETVIMNNIESTSFKLQCL 574 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 K G +I+IDDFGTGY++ L++L DI+KID FV+ + +N + I+ +I L Sbjct: 575 QKLGVKISIDDFGTGYSSLNYLQQLPIDILKIDRSFVRRLESNPSEFQIIEAIIKLGNIL 634 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + +AE +ET +Q L+ LGV Y QG++ +P Sbjct: 635 GMETLAEGIETSEQYNLIQSLGVDYAQGFIFSKPL 669 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 631 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 90/450 (20%), Positives = 172/450 (38%), Gaps = 20/450 (4%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---- 351 LI+F+ + + + + H A D LT LPN L+ Q + Sbjct: 439 TRLINFTTRIAGIAI---ERKKAEDQIHFMANHDVLTGLPNRALLQDRLSQAILHAQRYD 495 Query: 352 ----FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + +DN + ++ G ++++ ++ + + + +L G E +LVLS Sbjct: 496 RWVSVVFIDLDNFKLINDTLGHNAGDRLLKTVAERMVGCISSTDTIVRLGGDEFVLVLSD 555 Query: 408 -PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 P+ + + L + + + + + + + + L+ Sbjct: 556 QPKNVDLIAETLQKLRTAIAEPLQLGDHCVRATASIGIATYPKDGKAPESLVANADAAMY 615 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 ++ A + + ++ LL +RTAL + L+ QP + + Sbjct: 616 RAKAVGRD-NFQFYAPEFNTRAHERFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVE 674 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNL 579 ++ G M P F+P + L VL + SVN+ Sbjct: 675 ALIRWNHPAHGAMAPVGFIPTAEETGLIVPIGDWVLHEACRQNKAWQDLGLEPITVSVNV 734 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 +KN+ R++ + + LE+TE + ++ + +L G +I+I Sbjct: 735 SARQFSEKNLVERVVHALSESDLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISI 794 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK +KID F+ D+ TN D + ++ L + + V+AE V Sbjct: 795 DDFGTGYSSLSALKTFPIARLKIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGV 854 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET +Q A L K +QGY +P + Sbjct: 855 ETDEQVAFLRKNNCDEMQGYHFSKPVCSRE 884 >UniRef50_Q1YPY3 PAS:GGDEF protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPY3_9GAMM Length = 873 Score = 631 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 113/586 (19%), Positives = 210/586 (35%), Gaps = 42/586 (7%) Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 ++L F R + + R + + A L Sbjct: 298 IALIVLQRDGECFFNCFVRDLTEHNKNIEELRISAITFNSQ----DAIIITDAD---LRT 350 Query: 230 LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L I GY + + ++ + T + Sbjct: 351 LRVNQRVVDITGYSSADLIGLRPSLLSSTVQGEQFYGDMWRTLETEGSWEGEVWDTRKNG 410 Query: 287 TEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + L + + ++ ++ H A PLT LPN RAL Sbjct: 411 DVFPLLVTVKTIHDAKSRITHYVFSFSDITTTKRDADAIHKLAFFAPLTHLPNRRALIDT 470 Query: 344 PEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 Q + + +DN + ++ G + + + L ++ ++ + + Sbjct: 471 VSQALNSSQRHIKSLALLSIDLDNFKNINDTLGHQLGDKILIETAQRLRRCVRSDDAVAR 530 Query: 396 LPGSELLLVLSGPET-----EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGN 447 + G E ++VL ++ + ++ + + + + + + G D Sbjct: 531 IGGDEFVVVLENLDSNIESAKVEVEVVTTKILAVLNQSYRVDEQDIHSGASIGVALTDNG 590 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 Q ++ L Q QS + + + T Q L N + +A+ LY Sbjct: 591 QILIEELFKQADIALYQSKRSGRNQ-MCFFDLAMEETVTLQAQLANALHSAVQLQQFELY 649 Query: 508 AQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + + G + ++ GI++P F+PL +L VLE+ L Sbjct: 650 YQVQVDSQQRPVGAEALIRWEHPQLGIVSPSDFIPLAEASDLILSIGQWVLETACAQLKR 709 Query: 566 HPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 G +VN+ P Q N +++ +ISP + LE+TE N + Sbjct: 710 WQSQLHTSGLSVAVNISPRQFHQCNFVETVLQAIASCNISPSLLKLELTETVILDNTSET 769 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + QL + G A+DDFGTGY++ +K+D FV++I D +IV++I Sbjct: 770 IEKMHQLQRAGVEFALDDFGTGYSSLS--------QLKMDQSFVRNIGIKEGDDIIVQTI 821 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AK+ ++ V+AE VET+ Q L LG QGYL G+P P+A+ Sbjct: 822 IAMAKSLAIKVIAEGVETEAQHEFLDALGCPLFQGYLFGKPVPIAE 867 >UniRef50_C6E953 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=C6E953_GEOSM Length = 953 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 98/589 (16%), Positives = 216/589 (36%), Gaps = 27/589 (4%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + L+S + N L + I + R A + + Sbjct: 358 RNGRELEGLVSAELIEINGNPYLLTLFKDISERKRLEEDRARLAAIVESSDDAIMAVDRE 417 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFT--LGVGKLRYPFLNLTWAVSTLCLL-NY 277 A++ + + GY + L + + L + + + + Sbjct: 418 GAITSW------NAGAEKMFGYCAQDMKGVHLSFLVSPEKKEQVTCLNDGIRSDGAVTHC 471 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLL 334 + ++ ++ ++ + S ++ + R + QA D LT L Sbjct: 472 EVVHVTRGGSQIYVSLTMSPIKSADGGIVGTSCIARDVTERTRMEEIIKHQAQHDTLTDL 531 Query: 335 PNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN + + + +D+ + ++ G ++++ + L Sbjct: 532 PNRKLFGDFLNLELAQARRNRKSLAVLFMDLDHFKKVNDSLGHAAGDRLLQAVAQRLKRC 591 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGR 443 ++E++ + ++ G E +++ + +V + L + Sbjct: 592 VRESDTVARISGDEFNVLMPDLTQTDDVGIVVGKIMGVFRTPFVLEGAELKVTTSVGVSM 651 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F + ++ Q LL + + + ++ +T + + +R A+ + + Sbjct: 652 FPDDGDSAQELLQKADGAMYVAKQTPGN-SYQFYNGEINARTVARQNMERRLREAVSKDE 710 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L L QP+ + E G + +L + G++ P +FLP+ + VL + Sbjct: 711 LDLVYQPLLSLESGEIVGAEALLRWHHPEHGLLLPAQFLPVAEETGAIVPIGEWVLFNAC 770 Query: 561 KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + + +VNL Q N +R + + P ++ L++TE+ N Sbjct: 771 RQMRLWQSQGFDLSVAVNLSNREFHQPNFIDLAMRALSQSGLDPASLELDVTEKAIMDNP 830 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 S+ N+ +L G ++DDFG G ++ R+K L +KID F++DI+T D +V Sbjct: 831 AFSLRNMRRLTDIGVAFSVDDFGVGASSLSRIKELPIAKVKIDRSFIRDILTEPNDLDVV 890 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ ++ + + V A VE+ +Q AL+ G +QG LI RP P + Sbjct: 891 SAVICMSHSLKMRVNAVGVESAEQLALVGSFGCDEVQGDLISRPLPPHE 939 Score = 62.3 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 32/142 (22%), Gaps = 10/142 (7%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPVFF 248 + A E+R + + + +L + GY Sbjct: 260 HDVTELKWAEAALRASERRFSKIFQATPDLLSITSLKDGTILEVNEAFLRVLGYQRQEVI 319 Query: 249 IIF--TLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVLI-SFSVC 304 + LG+ L + + E ++ + + Sbjct: 320 GTYAGELGLWADSDQPAALLQQLEERGEVRDIEVRLKGRNGRELEGLVSAELIEINGNPY 379 Query: 305 LLYMVRIYHRSEWLNRRWHLQA 326 LL + + + L A Sbjct: 380 LLTLFKDISERKRLEEDRARLA 401 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 44/189 (23%), Gaps = 17/189 (8%) Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS-------PHFAQILWRR 202 + ++ + + + + + + +++ I RR Sbjct: 87 IVAVTAHSETSYLLSAIEIGMDHYVLKPVNYPELFHVLDRIAEKIMLKRLVSEQVERIRR 146 Query: 203 DIAPSLGKEKRAFTLSWLAA------LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 E+ SW + L E + +A + ++ Sbjct: 147 REQQLSQAERITHLGSWEWNLESGETVWSDELYRILGLEPESVAATFESLLRMVHPADRE 206 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC--LLYMVRIYHR 314 + L S L + Y L+ + L + S ++ Sbjct: 207 TMEKAVQQLRETGSALGIQYY--RLLRADGETRIVRGQLESVRDGSGRQTVIGACHDVTE 264 Query: 315 SEWLNRRWH 323 +W Sbjct: 265 LKWAEAALR 273 >UniRef50_C3X4C3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4C3_OXAFO Length = 905 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 97/566 (17%), Positives = 185/566 (32%), Gaps = 30/566 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYL 243 + ++ L + + + + G Sbjct: 337 RLEGIAADITSYKTTEKALAIASN----LFENNRDGIFIADQDRRITVVNRQFSRMTGLT 392 Query: 244 VPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL---AV 297 + + L ++ E + Sbjct: 393 QEKIMGNKPWYLQADIADSTCYSQLCDVIACTDHEEMAAFEKNRQEKIEPTHLTVKIVRD 452 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 + + + + ++E+L D LT LPN L Q Sbjct: 453 MDDRIISYIGTLLDISQNEFLEDHTRYMIEHDFLTGLPNRILLLDRLGQTLIAAERNRRR 512 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G M ++ + L +++N+ + + G E +++L+ Sbjct: 513 AAVMFLDLDRFKHINDTLGHAMGDRLLQQVAFRLTKCVRKNDTVSRQGGDEFVILLNDIG 572 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + N + S+ N + + + + + + LL + Sbjct: 573 NADDVALVANNIMHALSQNYQIENYEMSITPSIGIALYPEDGKDIDTLLKNADTAMYHAK 632 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 A ++ ++ L N ++ AL L QPI + G + L Sbjct: 633 EGGRN-AYQFFNAQMNLHLVERTRLENDLKAALQNSGFFLEYQPIVDTQSGHMTGVEAFL 691 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 + GI+ P +FL + L V+ + K S+NL + Sbjct: 692 RWNHPEFGILMPPRFLGVAEDTGLIGPIGEWVIRTACKQAGEWRDQGFPKTVSINLSSIQ 751 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L QKN+ I K ++P + L+ITE N ++ + +L G RI +D+FG Sbjct: 752 LKQKNLLSTIRNALKENGLAPDFLELQITEGSIMENVKTVSDLLHELRAMGIRIVLDNFG 811 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 G ++ LK+ IKID VF+ + T + DA + +I +AK L V A VET Sbjct: 812 NGCSSISHLKKAPIGKIKIDPVFIHALGTGSEDADVAGAIVAMAKNLRLKVSAGGVETDL 871 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L ++G QGYL+ + Sbjct: 872 QALRLKEIGCDEYQGYLVSPSLSAGE 897 >UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7B5_ALHEH Length = 735 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 104/665 (15%), Positives = 218/665 (32%), Gaps = 42/665 (6%) Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFF 147 M G + C + + + W L + S+ ++ Sbjct: 71 AMQGIPVGPGIGTCGSAAHERRLVATADIMADRSWNGFHDLARDEGVRACWSVPVIARSG 130 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 +T++ + + + D Sbjct: 131 ALLGTFATYYRQPGEPTA----------------HDQAQIQRAAGLVALAVERQLDRRAL 174 Query: 208 LGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIF--TLGVGKLRY 260 E+R +L +V + L + G + R Sbjct: 175 QEAEQRYRSLFTEHPDAVFQVDLEGRLRAANRSATRLIGLPESELLGRHYHAFVFSEDRR 234 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWL 318 AV +Y ++ L + V + + R + Sbjct: 235 RSDAAFEAVCRGKAQHYEVQARTANGSKVELEITNLPIIVDDRVVGIYGIARDVTLRKQY 294 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLM 370 R A D +T LPN R E + + +D+ + ++ G Sbjct: 295 EARLAYYASHDTITGLPNRREFESRLRHDFYLCRQHNDLLAVLYIDLDDFKPVNDSLGHA 354 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 + + R L L+ ++ L + G E +++L G E + + + R Sbjct: 355 FGDQLLVAAARRLERLLGPSDTLSRFGGDEFVMLLPGLSGEAEALAVADRVLTLFKRSHS 414 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT- 486 + + + ++ + ++ + +Q+ + + Sbjct: 415 LGRHEVHISASIGIALNHRDVKSPEEMVQFANRAMQQAKQQGRN-TWRRYAGELGTRAQG 473 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 + + L ++ A+ L+L+ QP+ + + ++ + G++ P F+PL Sbjct: 474 EDISLRRDLQEAIAGDQLMLHYQPVVDAATGYLHSVEALVRWQHPERGLIPPGVFIPLAE 533 Query: 544 QFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 Q +L + +A + +VN+ PL + + ++ + Sbjct: 534 QTGQIIDIGHWILHRACRDMADLKARTGRTLPVAVNISPLQFRRPGFLDNLAQVLSESGL 593 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + + LE+TE ++ E+++ + L G AIDDFGTG+++ L+ L D +K+ Sbjct: 594 PAETLELELTEGVLMADTEATIDTLAALRSLGVHAAIDDFGTGFSSLSYLRYLPIDKVKL 653 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F++D+ + A IV+ + +A L+VVAE +ET+ Q+ L G LQG+ Sbjct: 654 DRSFIQDVTNSRNTAAIVQGVITMAHHLELAVVAEGIETEAQRRDLQDRGCDLLQGFFFA 713 Query: 723 RPQPL 727 RP PL Sbjct: 714 RPMPL 718 >UniRef50_B9Z392 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z392_9NEIS Length = 709 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 122/652 (18%), Positives = 219/652 (33%), Gaps = 28/652 (4%) Query: 105 RWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYL-VGSFFDFPLKISTFFGDADAI 163 G L + V L L L G+ + L +S A+ Sbjct: 45 ACHDGQSALEQLMAGGVDLMLLDLHLGDMNGLDLLGMIQRAGIDTEVLVVSGDTAFDSAV 104 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + S + + + + E+ +L + Sbjct: 105 CALRSGASDYVCKPYAVEELMHRVELALQRRSLARANLAMAQQLHTSERMHRSLVEASPD 164 Query: 224 SVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 + L + GY L + Sbjct: 165 LIFTLDERFCFTFANERTHGLIGYSPQELLGQSLLDLVLPVDAERVRYVLEHRTGQRAIE 224 Query: 279 QNFLQGVET--EYSLAFILAVL----ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 E L + S L + R + R A D LT Sbjct: 225 FRIASRGGEIAERHFEASLVPVALDLPQLSSRLYGVARDVTDKKHAEHRMAYLAYHDLLT 284 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN + + + +D + + +G + ++ + + L Sbjct: 285 GLPNRALFRDRLGLAIMQAKRKGRQVAVLFVDLDRFKLANDTFGHIKGDELLKQVGQRLQ 344 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAW 441 +++E + L +L G E ++L + + L + + + + Sbjct: 345 CVLRECDTLARLGGDEFTILLPDLSGKEDAALLAGKLVKEVAAPFSIDGDDVFLTVSIGI 404 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + + ++ LL Q A ++ ++++ + N +R AL+ Sbjct: 405 AVFPDDGDDIETLLRHADIAMYQVKAQGKN-GFGFFLPVMDAAASQRLRMENEVRRALEL 463 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 LY QP ++ G + ++ G++ P FL +I + L V+E Sbjct: 464 EQFELYYQPQVEFDSRRIIGCEALIRWPHPTRGLVPPGAFLGVIEEIGLMKPLTYWVIER 523 Query: 559 LLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + L R SVN+ P L+ + +I RY I Q+ +EITE Sbjct: 524 ACQTLREWKLAGLELSRMSVNVPPEVLVDDDFYDYLIATVDRYGIRRQSFEIEITENAFI 583 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 ++ ++ + L + G R+AIDDFGT Y++ L+ L +KID FV++I D+ Sbjct: 584 ADQQAMSLKLAGLAEEGIRVAIDDFGTQYSSLSYLRHLPVTTLKIDQSFVREIEAGKEDS 643 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I +A +L++VAE VET+ Q L LG +QGYL G+P P +D Sbjct: 644 PIVRAIVAIAAGLNLNLVAEGVETEVQADYLGSLGAVEMQGYLFGKPMPASD 695 >UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains n=1 Tax=Idiomarina loihiensis RepID=Q5QUC0_IDILO Length = 829 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 134/766 (17%), Positives = 275/766 (35%), Gaps = 44/766 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + +I + ++++ F + + L S L + S + + + + + Sbjct: 62 LIVSAVISGVGVWSMHFIGMLAFELHLPMSHSVLLTLISVVPAIVGSFIAMKIQMSLSSV 121 Query: 61 WRGV-VPVLCGMFCTNLWNFHLSFLQTAVML----GSQTFVVLCACAILRWQLGTRWRYG 115 + + G + ++ ++ + L V A ++ L Y Sbjct: 122 RATLIAGTVLGAGIGLMHYTGMAAMEMSAHLRYDPLWFVLSVFVAVSLGIIALLAYRHYK 181 Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 + R W R +V I + + G + + + F+ + Sbjct: 182 KSERTSWFRRRSAQIVVAAIIALA--ISGMHYTAMIA-ANFYPTRAPDAVFSGHGNWLAY 238 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----L 230 V+ + +I S ++ + ++ + + +LL L Sbjct: 239 VVGIGSCLTAIMAIIAS--QIDRRLQQQQKLAQMSAEQLYEVISAIDDGLLLFDEHNRVL 296 Query: 231 CTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + G + + + + N+ +++ N + T Sbjct: 297 LANQAFTRLTGDDLERIKGSKLNIEDYIERSDKLLENIKNSLARRVAWQGKVNVRKRSGT 356 Query: 288 EYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + ++ + + V + R A D LT L N R+L Sbjct: 357 TFPVRLSISKVRYNQQKERHFVATVTDISAEVESSERIRYLAYNDALTGLANRRSLLDHL 416 Query: 345 EQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + ID + ++ G M ++ + L + N L +L Sbjct: 417 QDQLATYKEAGQNGALILCDIDKFKILNNTLGSDMGDLLLKRVAERLQSSTKANSFLARL 476 Query: 397 PGSELLLVLSGPETEGRL---QHMVNIL------NSRQIHWNNTGLDMGYGAAWGRFDGN 447 +E +VL+G E + Q ++ + + N+ + A FD + Sbjct: 477 SANEFAVVLTGLERGNSVNIKQQLLTRIYQLLDQLQQPYQLNSYTHLCSFSAGASLFDDS 536 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + + L+ Q S + + + +K+V L +R A+ Q + LY Sbjct: 537 ESNAETLMTQSGLALSHSKRKGTGE-VSLFRQEFADAVSKRVKLEEQLRNAIKQNEFELY 595 Query: 508 AQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + G + ++ + DG ++P F+PL + L + E + L Sbjct: 596 LQPQVNIESKPTGAEALIRWKQSDGRFVSPADFIPLAEETGLIVPLGYWITERACQILQQ 655 Query: 566 HPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +K + S+N+ Q ++ L ++Y I P + LE+TE + S Sbjct: 656 WQQSPEKAKMQLSINVSAKQFQQPEFVEQVQLLVEKYEIRPHRLKLELTESLLMDDISSV 715 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 I+QL + G A+DDFGTGY++ L ++ D +KID FV++++ + A IV +I Sbjct: 716 TNKIKQLKRLGIEFALDDFGTGYSSLSYLMQIPFDTLKIDVSFVRNMLDSMEKAQIVYTI 775 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L ++ L++VAE VET++Q L +L QGYL +P P ++ Sbjct: 776 IQLGESLKLNIVAEGVETEEQFNYLARLNCDTFQGYLFSKPVPESE 821 >UniRef50_Q984Y8 Mll7787 protein n=2 Tax=Mesorhizobium RepID=Q984Y8_RHILO Length = 724 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 112/565 (19%), Positives = 193/565 (34%), Gaps = 40/565 (7%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT---PYENDFIAGYLVPVFFIIF 251 RR + +R + +L+ F+ Y V Sbjct: 155 EDITEQRRAEQDLKEQHRRFDAALANMSQGLLMYDADGKMIVRNRRFLELYNVTAADFPL 214 Query: 252 TLGVGKLRYPFLNL--------------TWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 L + T A + ++ +L + Sbjct: 215 GTTHRDALEKLLEIGIYQQIDVDSEVAKTEACLVVAKMHSAYRYLT-DGRT--VLVTRQP 271 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------QEAGKS 351 + + R A D LT LPN + + + Sbjct: 272 MSG--GGWVVTFDDVTERRRTEERMIHLAHHDTLTGLPNRSMFRERLDLALEDAAAPPLA 329 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM-QENEKLYQLPGSELLLVLSGPET 410 L +D + ++ +G ++S+ L + E + + + G E +++ + Sbjct: 330 IFSLDLDRFKAINDTWGHPAGDWLLKSVAERLQRCLHNETDVVARFGGDEFVVMQFNSKG 389 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + ++Q + + +G F + LL ++ + Sbjct: 390 IADAEKLAKRIVEAIAKQFRDKSRDMHIGISLGIAVFPQDGRDADTLLKNADTALYRAKS 449 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 L E + + L + AL + + L QPI N E G + ++ Sbjct: 450 EGRNL-YRFFEPAMDAIVQARRALEVDLDAALPRQEFDLDFQPIMNIASGEIIGAEALMR 508 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G + PD F+P+ + L L A+ P G R +VN+ + L Sbjct: 509 WHSPARGTVAPDAFIPVAEETGLIVPLGEWALRKACAAAASWP---PGLRIAVNVSAVQL 565 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 A +I + + LEITE +++ + + QL G RIA+DDFGT Sbjct: 566 KSGGFARSVISALAFSGVPAGQLELEITETVLMDESKAVLKTLRQLRDLGIRIALDDFGT 625 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+R D IKID F++D+ N A IVR+I L + V AE VET+ Q Sbjct: 626 GYSSLAYLRRFPVDKIKIDRSFIRDMG-NRDTAAIVRTIIGLGNELGIVVTAEGVETEVQ 684 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 +L G + QGYLIG P AD Sbjct: 685 LDMLRDNGCEEAQGYLIGVPSKAAD 709 Score = 42.6 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 5/150 (3%), Positives = 20/150 (13%), Gaps = 19/150 (12%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 RR + +R + + + + Sbjct: 25 ERAAEGVERPRRMEDELREQNERFSAAVENMSHGLCMFDADERMIICNGNYINIFCLDAK 84 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG---------------VETEYSLAFIL 295 + + + +++ Sbjct: 85 LVRPGIHFIDILRHSVDIGIASQSADELYAVRKPYIDQAKPSTYEETLSDGRIINISHRP 144 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 L + + + Q Sbjct: 145 LAL----GGWVSIYEDITEQRRAEQDLKEQ 170 >UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UHK4_RALPJ Length = 1183 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 106/585 (18%), Positives = 195/585 (33%), Gaps = 25/585 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 V+ ++ + + + I + R Sbjct: 591 HRWVLSRGNIERNDRDEVVALFGTMQDITDRRESDEQLRLLRRVVESVPSGITVADAQQP 650 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 ++ + + GY F + + A+ + Sbjct: 651 D---FPIVYVNPGFERMTGYRAEEILGRNARFLHSSEPGQPALNEVRTALRDESEIRVLL 707 Query: 280 NFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + F+L+ + + + E R A D LT LPN Sbjct: 708 RNFRKDGHAFLNNFLLSPVRDAKGAVTHYVGIQDDVTEQEMTRTRLAQHATIDSLTGLPN 767 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L Q + + ID + ++ G ++ +R + L Sbjct: 768 RTLLADRVQQSVEMAARQRSRFYVALVNIDRFKVVNDSLGHLLGDEVLRRVAERLRDAAD 827 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + + G LV+S + G L + + + + + + Sbjct: 828 TVDTVARFGGDVFALVISHAGSRG--VDFGFDLFAEPVRVEGHEVFVTASIGVAEYPAHG 885 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L+ + + L+ + + ++ L + IR L+QG L Sbjct: 886 ADADSLIRHAEMAMYYAKQNGRNR-LEFFAPEMDIGVSYRLNLEHQIRATLEQGQFRLLY 944 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G++ P F+P+ + L VL + A Sbjct: 945 QPQIDTKTGRVCGLEALIRWIHPTRGLLPPAAFIPVAEESGLIVEIGNWVLTEAARQRAE 1004 Query: 566 HPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ PL + + +++L ++Y + + LE+TE E + Sbjct: 1005 WHKRGLADDLTLAVNVSPLQFKRGTVLPTLLKLQRQYGLGSGFLELEVTESMLMEGTERT 1064 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++ + + G RIAIDDFGTGY++ LKRL D+IKID FVKDI ++ DA I ++ Sbjct: 1065 IEDLTAIRQLGVRIAIDDFGTGYSSLAYLKRLPIDLIKIDRAFVKDIDRDSNDAAICTTV 1124 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + V AE VE Q A L LQGY P Sbjct: 1125 VVLAHNLGVKVCAEGVEDAAQSAFLASHQCDVLQGYYFSEPLLPE 1169 Score = 60.4 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 55/260 (21%), Gaps = 6/260 (2%) Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 TN W F + +L + A+L G + +Q+ Sbjct: 373 ARATNDWIFDWDIATGESWANASLHRLLGSDALLGQGDDDGTGGGTSRTLTFQQFVHPDD 432 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 V ++ S D + A TV SL+ + I Sbjct: 433 VDAFA-HELRTVLNSDRDSWQHVCRVIDANRATRTVEIRASLYRDQDGRAVRMVGGVTDI 491 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC--TPYENDFIAGYLVPVFF 248 + R A E+ A SW + G Sbjct: 492 SQRSAIEQELRSSEANLRVAEQIALLGSWRWDVLRDSTTWSSGMYVLTGMPPGAPPAFAQ 551 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL---AVLISFSVCL 305 + AV+ + ++ + V L Sbjct: 552 QAQFFTADSYNRLREAASRAVTEGEAYSLELEMIRRDGEHRWVLSRGNIERNDRDEVVAL 611 Query: 306 LYMVRIYHRSEWLNRRWHLQ 325 ++ + + L Sbjct: 612 FGTMQDITDRRESDEQLRLL 631 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/335 (6%), Positives = 67/335 (20%), Gaps = 37/335 (11%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCV--MLSILFIFGWRGVVPVLCGMFCTNLWN 78 V + + A + ++ +LS V ++ G Sbjct: 173 GVAYAAVRQSALIAAAVDGMSEAPVYLVDAAGNVLSTHGALEAAQVPAIVRGPLVAAAAQ 232 Query: 79 FH--LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG--LTSRYVWQRLFWLGLVTPI 134 F+ + ++ A R + + L G + + Sbjct: 233 QPGEPVFVDDTDGVRRAYAAMVVPHAAGGHLRIVRGVDATDIVRQQRNVTLAGGGAILLM 292 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 + + + + DA + D + L R Sbjct: 293 VVMLLALIQMALRRMVMPRIDALVDAARHYATGDFSARVPEHGSSRDELSLLERTFNEMR 352 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAG-------- 241 A + +R ++ + + T + G Sbjct: 353 AAIQRHDATVHRLT---ERFQRVARATNDWIFDWDIATGESWANASLHRLLGSDALLGQG 409 Query: 242 ----------YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 + + V + + + + + ++ Sbjct: 410 DDDGTGGGTSRTLTFQQFVHPDDVDAFAHELRTVLNSDR--DSWQHVCRVIDANRATRTV 467 Query: 292 AFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 ++ ++ V + + + Sbjct: 468 EIRASLYRDQDGRAVRMVGGVTDISQRSAIEQELR 502 >UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XP68_PSEMY Length = 1254 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 124/589 (21%), Positives = 209/589 (35%), Gaps = 33/589 (5%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---- 228 +++ L R +L D + E R TL A ++LL Sbjct: 657 ADGQVVFTRLSLRAVRGGAGRQTLFLLLVEDTSARREAEARYHTLVEHAPEAILLFSPEG 716 Query: 229 ---------LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 L Y + + G + + Sbjct: 717 GIVECNENALQLLRYRREDLLGKTIQSISPPRQADGSLSSRTGREHLQRAIAGDTPVFEW 776 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + L + + + V + R A +D LT LPN R Sbjct: 777 THRDSAGRQLPCEVRLVRMPGEELLIRASVLDISERQRYQREIERLAYSDELTGLPNRRL 836 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + + + +D+ + ++ G ++ + + L ++ + Sbjct: 837 LLDRLQHAMDRENREGSLGALLFIDLDHFKTVNDSLGHLIGDALLCEVTTRLARELRTED 896 Query: 392 KLYQLPGSELLLVLSGPETE-----GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 L +L G E +++L +E + L L + Sbjct: 897 TLARLGGDEFVVLLEALGSEPQAVAEHAAAVGEKLLRGLQGSCLIEGHELAISASIGIAL 956 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + +L Q ++ AL + +++ L +R A+ + Sbjct: 957 HPLGLQRAADILKQADTAMYRAKHAGRN-ALHFFAPEMQAAIDQRLQLQGELRQAIARQQ 1015 Query: 504 LLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L L QP + G + +L L + G ++PD+F+PL + L VLE Sbjct: 1016 LQLVFQPQLVLADDTVAGAEVLLRWLHPERGEISPDQFIPLAEETGLIQDIGQWVLEQSC 1075 Query: 561 KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 LA +VNL P L Q R+ +R+ + QA+ LEITE + Sbjct: 1076 ATLARWQAQWPQLVLAVNLSPRELRQAGCVARVEDCLRRHGVPAQALELEITEGVLLEDV 1135 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + + N++QL G R AIDDFGTGY++ LKRL D +KID FV D+ + M+V Sbjct: 1136 DRCIGNMQQLKAQGVRFAIDDFGTGYSSLTYLKRLPLDRLKIDRSFVADLDGDASGRMLV 1195 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++I +A+ L VAE +E Q ALL + G QGYL G+P A+ Sbjct: 1196 QTILMIARNLDLECVAEGIEQPSQLALLREQGCALGQGYLFGKPMVEAE 1244 Score = 101 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 72/339 (21%), Gaps = 20/339 (5%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR 62 +L ++ L+ L + A L V L+ Sbjct: 106 ALGSLADLLRFLAFGVLAPAALVALGLQANLWLTGLQLGEHWAQASLAVWLNDAINLLAL 165 Query: 63 GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW 122 ++ G + S + L G V Sbjct: 166 ATPLLVFGSPLLRARGWLPESTAADAQALSISRSWRGWLLAFGIFLALMALVGSLPLLVA 225 Query: 123 QRLFW---LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 L L ++Y F L + GD + L AVL+ Sbjct: 226 LPFLGIGMLALALRYAFAGALYGAVLVFAATLPLPLLRGDPGFAMLDLPRSQLQLAVLLL 285 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--------LC 231 + R + A R RA + L V + + Sbjct: 286 MGAALLVGRALGDLRQALSRSARMQQQL----ARANLAMEASPLGVTIADARQPDLPLVY 341 Query: 232 TPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 I GY F + + L A+ + + Sbjct: 342 CNAAFTQITGYSADETLGRNCRFLVADDHAQLELQPLRSALREGRSGHAVVRNYRKDGRP 401 Query: 289 YSLAFILAVLISFSV--CLLYMVRIYHRSEWLNRRWHLQ 325 + +LA + + + + L + Q Sbjct: 402 FWNEVVLAPMRDERGISHFVGLQQDVTERVELAAQVEQQ 440 Score = 64.6 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 36/380 (9%), Positives = 82/380 (21%), Gaps = 64/380 (16%) Query: 6 NLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVV 65 ++ ++ + + LAF + + L+ L + L + I + + L + Sbjct: 195 SISRSWRGWLLAFGIFLALMALVGSLPLLVALPFLGIGMLALALRYAFAGALYGAVLVFA 254 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL 125 L F + L + + + ++ A + R R ++R Q L Sbjct: 255 ATLPLPLLRGDPGFAMLDLPRSQLQLAVLLLMGAALLVGRALGDLRQALSRSARMQQQ-L 313 Query: 126 FWLGLVTPIGIKCSMYLVGSFFDFPLK-------------------------ISTFFGDA 160 L D PL ++ Sbjct: 314 ARANLAMEASPLGVTIADARQPDLPLVYCNAAFTQITGYSADETLGRNCRFLVADDHAQL 373 Query: 161 DAIFTVVDLLSLFTAVLI------------------------YNMLFYYLTRMIVSPHFA 196 + L + + F L + + Sbjct: 374 ELQPLRSALREGRSGHAVVRNYRKDGRPFWNEVVLAPMRDERGISHFVGLQQDVTERVEL 433 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI------- 249 + A L + +A L + L Y + I Sbjct: 434 AAQVEQQRAQLLRQNHLFSQTEDIANLGGWVFELGDSSMFWSDGCYRIVERDIHLGPPSF 493 Query: 250 ---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + L A+ L ++ + + L+ Sbjct: 494 EQALHYYDAPSQTLIIETLQAALGGLDEVDVELRLAARLGGRL-VRVRGMAERDDDGSLV 552 Query: 307 ---YMVRIYHRSEWLNRRWH 323 +V+ + + Sbjct: 553 RVYGVVQDISERKRTESQLR 572 Score = 56.5 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 33/182 (18%), Gaps = 12/182 (6%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 D + L + + +R + +++R Sbjct: 523 DVELRLAARLGGRLVRVRGMAERDDDGSLVRVYGVVQDISERKRTESQLRERDERLRLFF 582 Query: 219 WLAALSVLLLLLC-----TPYENDFIAGYLVPVFFII--FTLGVGKLRYPFLNLTWAVST 271 + + L + I G L V Sbjct: 583 EAPLIGMALTTQSFGWEEVNQKLCSILGRSRDELMASSWHQLSHPDDLAGEQARLEEVLL 642 Query: 272 LCLLNYNQ--NFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQA 326 + FL+ L + + L +V R+H Sbjct: 643 GSSDGFEMDKRFLRADGQVVFTRLSLRAVRGGAGRQTLFLLLVEDTSARREAEARYHTLV 702 Query: 327 LT 328 Sbjct: 703 EH 704 >UniRef50_A2SCH7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Methylibium petroleiphilum PM1 RepID=A2SCH7_METPP Length = 806 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 115/673 (17%), Positives = 231/673 (34%), Gaps = 28/673 (4%) Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 + Q ++ S ++ C A + L Y LT Q + L + IG Sbjct: 126 VASVQAEQLRLLADSVPALIACYDAREQRCLFANRPYALTFGRDEQSILGLPIAEVIGEA 185 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV--SPHF 195 + ++ + + + +L R+I Sbjct: 186 ALRRIRPQLDTVLVEQRAVAYERQLVRADGRTQWVEVHLL---PQLATDGRLIAFFVLIS 242 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIF 251 R E+R +A ++ + + GY + Sbjct: 243 DISRHRLAEQAVRESEERLGKFMQASAEGIVFHKGGVITDANAPIGMLVGYGLDELMGRR 302 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVR 310 TL + +S+ Y + + FI+ + + +VR Sbjct: 303 TLDF-VAPDQVSKVAAVMSSGQETTYESALIDKSGRRIPVEFIVRTMMRGDERLRMTIVR 361 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 H A D LT LPN A +Q + + +D+ + Sbjct: 362 DLRDRHAAQAHIHHLAHHDALTGLPNRLAFMAEIDQLMARAAASREALALLFIDLDHFKR 421 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + ++++ + + +++ ++ + + G E ++++ G + + L Sbjct: 422 VNDSLGHLAGDELLKTVAQRIGAVLRASDVVARFGGDEFMVLIGGGPRLEDVADVARKLL 481 Query: 423 SR---QIHWN-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + + + F G+ T L+ ++ A + Sbjct: 482 AAIEVPLDAEVGRSISVTPSIGIAMFPGDGITPAELIKHADTAMYRAKARGRA-TYQFFD 540 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 ++ ++L + AL++G+ +L+ QP + G + ++ + G++ P Sbjct: 541 PTLASNAYAALVLEGELAQALERGEFVLHFQPQVRAGDGVLVGAEALIRWQHPERGLLLP 600 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRII 594 D+F+PL Q L VL + D +VNL + + + Sbjct: 601 DQFIPLAEQQRLMLPIGTWVLHEAARAARRWHDDGLCAVPVAVNLSAVQFQAPDFVSTVA 660 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + + LE+TE + QL G R+++DDFGTGY++ LK Sbjct: 661 QALAGAGLPGRLLELELTERMLMDELPEVSGRLAQLKALGIRLSVDDFGTGYSSLGHLKS 720 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +KID FV D+ I R+I +A++ ++V+AE VET+ Q+A L + Sbjct: 721 LPIDKMKIDRSFVVDLPEARGSVAIARAIIQMARSLGITVIAEGVETEAQRAFLAREQCD 780 Query: 715 YLQGYLIGRPQPL 727 LQG I L Sbjct: 781 ELQGEAISPSLSL 793 Score = 45.7 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/240 (7%), Positives = 42/240 (17%), Gaps = 8/240 (3%) Query: 90 LGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 L S ++ GL + + L P L Sbjct: 18 LPSAVLLLARDGRASHANAAFCRLMGLGAEAARGAGWQQLLTDPDRATLLGAL-AQGEHL 76 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 L + + + + + + A+ + Sbjct: 77 SLPLHLCSPGEHDGIQREVWVDCVAQWRPSRGCWVCVLHDVSATRQAERVASVQAEQLRL 136 Query: 210 KEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP--VFFIIFTLGVGKLRYPFLNLTW 267 L + L G + I + Sbjct: 137 LADSVPALIACY-DAREQRCLFANRPYALTFGRDEQSILGLPIAEVIGEAALRRIRPQLD 195 Query: 268 AVS-TLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWH 323 V + Y + ++ + L ++ L+ R + Sbjct: 196 TVLVEQRAVAYERQLVRADGRTQWVEVHLLPQLATDGRLIAFFVLISDISRHRLAEQAVR 255 >UniRef50_C0GP21 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GP21_9DELT Length = 721 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 95/563 (16%), Positives = 205/563 (36%), Gaps = 33/563 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIAGYLVPVF 247 + L + EK+ TL + ++LL+ E + GY Sbjct: 142 QELEELVEKRTRQLQESEKKYRTLFETSKSAMLLVDTESGLLTMANKEFCDLIGYTRQEV 201 Query: 248 F-------IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + R F T + L E + L + +A + Sbjct: 202 ENSLHFLNFVHPDDHERARKYFDTSRQDAGT-APAEFEIKGLTREEKKLHLYYKVAAIPE 260 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKS 351 ++ ++ + + + + LT LPN + +Q + Sbjct: 261 WNSLVISIF-DLTDKRRVEEELRQRTFYNSLTGLPNSELFKNRLKKSIQTRQEDQGYFFA 319 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G I + + L +++ + + G + L++ + Sbjct: 320 VIFIDLDRFKLVNDSLGHQKGDELISLMAKRLERGVKKRDTVAHFGGDDFGLLIEAEDLP 379 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + + ++ + Sbjct: 380 EAALR-AEKIKDQFVEPFEIAGNEIYTTCSMGIVVSSQDYSEPEEIFRDADTALHRAKST 438 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 + + Q + + L +R A+ Q + +LY QPI + G++ ++ Sbjct: 439 GPG-NYVVFDPQMHAQVSDLLQLETELRKAIQQKEFVLYYQPIYNLADLRITGFEALIRW 497 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 + + G++ P+ F+P+ + L +L++ + + ++NL + Sbjct: 498 IHPEKGMVPPNVFIPIAEETELINPLGEWILDTACRQARKWNKGGRELTMNINLSGVQFK 557 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 KN+ + F++ ISP + LE+TE +AE S+ + ++ K G R++IDDFGTG Sbjct: 558 DKNLINVLENTFRKNSISPLHINLELTESVVMGDAEESINTLNKIKKLGARLSIDDFGTG 617 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L++ D +KID F+ + T +VR+I + ++ + VAE +ET +Q Sbjct: 618 YSSLNYLQKFPIDNLKIDRSFINTMET-QSGQELVRAILAMTQSLGIKAVAEGIETWEQV 676 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 LL +L QGY +P Sbjct: 677 KLLQELNCNLGQGYHFSKPLDEE 699 >UniRef50_Q1K260 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K260_DESAC Length = 774 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 124/737 (16%), Positives = 243/737 (32%), Gaps = 30/737 (4%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILF---IFGWRGVVPVLC 69 + L + V + + I + L + ++ I+ + + Sbjct: 33 RWQLISAIVVFCLVAEIMLVWSQSTFDLSILQYALLLGTLSTLNLYNLIYHYYYLKIARF 92 Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWL- 128 + + + L + L +R + L Sbjct: 93 AFIDHLHILLDIFVVTVLIHFTGGGNSW---LWPLYLVTTIEAAFLLENRRDVLGIGALN 149 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 GL + Y + + PL + + + + + L TA+ + R Sbjct: 150 GLFYAWALIAGHYNLLPYIYQPLDGTPALSETFLLLLWLWVTLLNTAIAFICTFLTHALR 209 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 + + + + I + Sbjct: 210 RKTAEASTLARRLGNFLNHAN-----DLIIQFRPDGTIDYANQASRSILNIDPDSNEINI 264 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-- 306 + R+ L T + L + +L Sbjct: 265 SSLIDPTDRPRWQRQVLLLENGTSFPATELLMRTNSDQQAIILDSNVTLLEENDGQWTLW 324 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 + R R D LT L + + EQ +F + ID Sbjct: 325 GIFRDITARRQAEARLDQLTNFDQLTGLAHRSNFMERAEQVTLMAKRERKNTAFLIINID 384 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + ++++ + LL ++E + + +L G E +++L E+ + ++ Sbjct: 385 RFKLINDALGSAIGDEVLKAVSQRLLNQVREVDVVGRLNGDEFVIMLVNVESADIVHNLA 444 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + I N+ L + + + +T + LL Q + + Sbjct: 445 VKITQALTPMIAINSHELFLTTSTGIALYPQDGDTPEELLKQAEIALLSVKSTGRN-GIQ 503 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGI 532 + + ++ LLN + AL Q +L+ QP N + + ++ + G Sbjct: 504 FFTDQIDLNQNSRLRLLNGLHLALQQQQFVLHYQPKVNIHTGQITSVEALIRWNHPEMGW 563 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P +F+PL + L VLE + R +VN L Q+++ Sbjct: 564 VMPTEFIPLAEESGLIGIIGRWVLEEACRQCLIWQQQGLPPIRMAVNFSGHQLQQESLLK 623 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I + K+ ++ Q + +EITE N E ++ ++ + K G IAIDDFGTGY++ Sbjct: 624 SITDVLKKTGLAAQWLEVEITETVIMQNPEVTINILQAIQKLGVHIAIDDFGTGYSSLAY 683 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR + +KID FV+DI + DA IV +I + L++VAE VET Q+ L + Sbjct: 684 LKRFPVNTLKIDRAFVRDIEQSDTDAAIVGAILKMGATLKLNIVAEGVETHGQRKFLEQH 743 Query: 712 GVQYLQGYLIGRPQPLA 728 +QG+L P Sbjct: 744 NCHEIQGFLYSPAVPPE 760 >UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS52_BACS4 Length = 607 Score = 630 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 117/550 (21%), Positives = 209/550 (38%), Gaps = 23/550 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLL----LLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + R AL VL+ + E + Y + L + Sbjct: 42 QALDQQYEQLISRFKIALETTALIVLVNDTGAITYVSEEFCDLLDYSESELIGVNYLSLQ 101 Query: 257 KLRYPFLNLT-WAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIY 312 + L +++ + ++ L+ L + L S L M R Sbjct: 102 HRSFKERELFSNTLASQKITSFEMIPLKKSGNPLILKTQIMPLIKSNQESDIFLIMHRDV 161 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMS 364 R + + D LT LPN E+ + +D +F + Sbjct: 162 TRLKQAEKVIKELGAVDTLTGLPNRDKFERDVRSRIEMKHAEKFPFAILFFDLDRFKFYN 221 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 G I+SI +TL + + ++Y+ G E ++ P+++ +Q + + Sbjct: 222 DTLGHFTGDKLIQSISQTLSSIQHKKVQIYRYGGDEFSVLFHSPKSKEEVQELAQEILLA 281 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 H L + F T ++ Q + + + Sbjct: 282 FESPFHVKGNELYITASIGISYFPVIGVTYDQIIQQAEMAMHYAKELGKGD-FQWYQSSI 340 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKF 538 + +++L+ +R A++Q + LY P + + G + +L G ++P KF Sbjct: 341 RTEHDEKLLMEKRLRIAMEQENFELYYHPQIDLKENKVIGVEALLRWNDEQLGKVSPYKF 400 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ + L + VLE + R +N+ P + + ++ Sbjct: 401 IPIAEETGLINQIGDWVLEKACIQAKKWNNEGHELRIGINISPQQFQRPDFVSKVKNTLD 460 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + +SP+ + LEITE N + + + +L +FG I+IDDFGTGY++ L+R D Sbjct: 461 KTGLSPKLLDLEITENDLLYNRDECLKTLYRLKQFGVSISIDDFGTGYSSLSYLRRFPID 520 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+K++V NT D IV SI LA L V+AE VET + A L+KL +QG Sbjct: 521 TLKIDQSFIKEVVDNTNDQAIVTSIIQLAHNMKLRVIAEGVETSEMVAFLNKLSCDEMQG 580 Query: 719 YLIGRPQPLA 728 +L +P P Sbjct: 581 FLYSQPLPPE 590 >UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6X9_KANKD Length = 855 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 105/595 (17%), Positives = 213/595 (35%), Gaps = 29/595 (4%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 ++ ++ L VL+ + ++ R L Sbjct: 259 PRLPKLWKWALIIGLGMIVLMLCINGILRWQVRKRTRLLVETNVRFNHLLKASPV---VL 315 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV---GKLRYPFLNLTWAVSTLCL 274 L V + + GY + + R L+ + Sbjct: 316 YQLKQDGVGYKPVWVSKNVKRLFGYEPEQLYSHDWWIGVLYEEDRQKTLDQFKEIFITGH 375 Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 + + + ++ + ++ + DPL Sbjct: 376 MVHEYRVRDAEGNTRYIRDERQLIPQSNHSENEIVGTWSDLTDVYEREDELKFLSHYDPL 435 Query: 332 TLLPNFRALE----------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 T LPN + LE + + + ID + ++ + I I Sbjct: 436 THLPNRQKLEERIEESIERSDEL--KECFAILSIDIDRFKKINETLSYQVGDAVIARIAE 493 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYG 438 L ++ ++ L ++ G + + V++ ++ + + R + + L + Sbjct: 494 RLKHILNVDDVLARVGGDDFVFVINDKVDVKKVSSIARKVLKRFAVPLRIDEHELMVTAS 553 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F + LL + + + + +S + ++L + +R A Sbjct: 554 IGIAMFPEDGRDPDTLLKNAEIARYSAKDKGRN-SFEFFNDQLSEGMHENLMLESALRMA 612 Query: 499 LDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ +L+L+ QP+ + G + ++ G++ P KF+PL + + L V Sbjct: 613 VERNELVLHYQPLVSFNDFTVVGVEALIRWQHPIQGLIPPYKFIPLAEETGIIGDIGLWV 672 Query: 556 LESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + + R SVN+ + + ++ + K ++ + + LE+TE Sbjct: 673 LREACRQMVEWDKAGLNVARASVNISVQQIETGLLPKQVESVLKETGLAAERLYLELTES 732 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + + + + + K G ++A+DDFGTGY++ LKRL D +KID F+KDI +T Sbjct: 733 TIMQDPQQASLAMTEFQKMGVKLAVDDFGTGYSSMAYLKRLPLDRLKIDRSFIKDIGADT 792 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D +I ++I LAK+ L VAE VE + Q L LG QGYL +P P + Sbjct: 793 NDEVICKAIVQLAKSLGLETVAEGVEEESQAEFLKGLGCDVAQGYLYSKPVPALE 847 >UniRef50_Q31DJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DJ5_THICR Length = 963 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 89/548 (16%), Positives = 193/548 (35%), Gaps = 27/548 (4%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFF---IIFTLGV 255 S + ++ A +L+ + + + I GY Sbjct: 403 RQESERFQMLTRSVFDNAGEGILVTDIHNRFVVVNKKFEEITGYSQEEVLGKNPSILSSG 462 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIY 312 + + + +S + T Y + + + ++ Sbjct: 463 QQSTLFYQAMWQELSEKDTWQGEIWNRKKDGTMYPEWLTINAVKDKQGRLLHYVGLMNDL 522 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMS 364 + + + + D LT LPN + +Q + + I + ++ Sbjct: 523 SQQKATEQEITRLSFYDILTGLPNISLFKNRLQQSIQMSVHEANQVALLIVDIARFKMIN 582 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR 424 G ++ + + L L+ + + +L L+++ + + + H + + Sbjct: 583 DAIGYEHGDQLLKGVAQRLTQLLDAEDSVARLGADNFLILMESFQNKQDVSHFAEEIMNA 642 Query: 425 ---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + +T L+ ++ + Sbjct: 643 FSLPFEVEGHEHVLDIKIGVALSSIDGDTALDLMKSADEALFEAKKL-PHSGYVYHSSEL 701 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 + T++ +R A+D +L+ Y QP + G + ++ + + G+++P KF Sbjct: 702 AATTSEYFFYEKALRQAIDNQELVAYYQPQIVLETNQVVGAEALVRWIHPEMGVISPAKF 761 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLF 597 + + L ++L + R SVN+ + L+ + ++ Sbjct: 762 IGIAESTGLIIPLGREILLQACQQWLAWQQQGLTLERISVNVSTVQLMHSGFVQSVAQVL 821 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + P+ + LE+TE N + + + L G +++DDFGTG+++ LK+L Sbjct: 822 EETGLDPKHLELEVTESFLLQNEQEGIAVLHALKALGLSLSMDDFGTGFSSLSYLKKLPL 881 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID F++ + + D IV +I + A + V+AE VET+ Q LHK G Q Q Sbjct: 882 DQLKIDQSFIRSLPHDKEDLAIVDAIIAVGLAVGVEVIAEGVETEAQMEYLHKKGCQLGQ 941 Query: 718 GYLIGRPQ 725 GY RP Sbjct: 942 GYGFSRPI 949 >UniRef50_B8G486 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Chloroflexus RepID=B8G486_CHLAD Length = 699 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 119/668 (17%), Positives = 226/668 (33%), Gaps = 52/668 (7%) Query: 106 WQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI--KCSMYLVGSFFDFPLKISTFFGDADAI 163 L R + ++ F L + + + L + D PL + G D Sbjct: 27 IALTLASSLAEARRLLAEQTFDLIVSDLVLSDGRGDELLTHANDDLPLPVVLMTGYGDEQ 86 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR----RDIAPSLGKEKRAFTLSW 219 V L + ++ I+ + + E+ + Sbjct: 87 VAVAALKAGALDYIVKTPDSLRDLPRIIERALRERRLLVERRQAEQALRQSERLFRAMIE 146 Query: 220 LAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV----- 269 ++ ++ ++ + GY V + G + + Sbjct: 147 RSSDAISIVDRAGRVRYASPSTRHLIGYAVDGMLAVPINGFAVIHPTDRERVRQLFNKLI 206 Query: 270 -STLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSEWLNRRWHLQA 326 + + + + + + ++ R + + R Sbjct: 207 QHSGSSVTADFRVRHAKGGWRWIEATASNWLDDPAVQGVIVNYRDITERKLMELRLQHGM 266 Query: 327 LTDPLTLLP----------------NFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLM 370 L D LT LP + + L +D+ +F++ +G Sbjct: 267 LHDSLTGLPNRLLLNDRLLQAIKRSHRNL-------HYQFALLFLDLDHFKFINDSFGHP 319 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIH 427 + + +I L ++ + +L G E +++L + +V + + Sbjct: 320 LGDRLLVAIASRLSSCLRTVDTCARLGGDEFVILLDDIASPTDAIRIVERILRQVSLPFE 379 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + N +L Q+ E + Sbjct: 380 IDGRLFHTSVSIGIVFGANNYTDPSQMLRDADIAMYQAKMAGKGR-YRIFEPAMREAAQI 438 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L + +R A+ + +Y QPI + G++ ++ GI+ P FL + + Sbjct: 439 RLDLEHELRRAVANHEFCVYYQPIIHLPSGRLVGFEALVRWRHPTRGILLPAAFLHVAEE 498 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L+ QVLE + + L SVNL ++Q N+ R+++L +Y Sbjct: 499 AGLNDSIGWQVLEQVCQQLVVWRRLNPRAAALSVSVNLSARQVMQPNLYDRLMQLLAQYQ 558 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P A+ LE+TE + + +L + G +IAIDDFG GY++ L +L D IK Sbjct: 559 VPPTALKLELTESTFMEYSHDVAALLNRLREQGIQIAIDDFGVGYSSLSYLVQLPIDQIK 618 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ + + IV +I +LA +L VVAE VETQ Q + +G QY QGYLI Sbjct: 619 IDRNFIVQLESKQHSQAIVNTIVNLAHNLNLEVVAEGVETQGQLDWIRAVGCQYGQGYLI 678 Query: 722 GRPQPLAD 729 G P + Sbjct: 679 GLPLTADE 686 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 630 bits (1625), Expect = e-179, Method: Composition-based stats. Identities = 103/440 (23%), Positives = 183/440 (41%), Gaps = 17/440 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + +R + R A D LT +PN L EQ + + L + Sbjct: 762 IGALRTRVAHKEAEDRLDFMAHHDALTGMPNRILLHDRFEQVAATARRRGSNVAMLFLNL 821 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ ++ G + H + + L ++E++ + + G E +++L ++ + Sbjct: 822 DDFHLVNDVLGRSLADHMLVQVVERLHGCIRESDTISREGGDEFIILLGDVGDLAAIEII 881 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + S ++ + + F + L+ Q +++ A Sbjct: 882 VQKILDAFSEPFTVDDHIVSVTSSIGISIFPNDGRDFNRLISQSEAALQKAKAAGKD-TY 940 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGG 531 + E ++ + + L +R A+ + +Y QP + G + ++ G Sbjct: 941 NFFTEQMNINALEHMQLQGQLRHAIINQEFRIYYQPQIDTLNERMIGAEALVRWQHPQHG 1000 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSVNLMPLTLLQKNI 589 ++ P KF+PL + L VL + +VNL + + NI Sbjct: 1001 LVPPLKFIPLAERSGLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRGNI 1060 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +I+ +R + + + LE+TE + E M + +L G +++IDDFGTGY++ Sbjct: 1061 VETVIQALERSGLPAENLELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFGTGYSSL 1120 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL D +KID FV+D+V + DA IV +I L L+V+AE VET+ Q LL Sbjct: 1121 SYLKRLAVDKLKIDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQLLK 1180 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 L +QGYL RP P D Sbjct: 1181 SLECNEVQGYLFSRPIPAED 1200 Score = 68.1 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 15/142 (10%), Positives = 34/142 (23%), Gaps = 13/142 (9%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT------PYENDFIAGYLVPVFF 248 R ++R T+ A L + L+ IAG V Sbjct: 328 LDITESRHSADVIRLSQERFATIFRQAPLGMALIDSLNGTIHELNPRFAEIAGRSVEEMK 387 Query: 249 IIFTLGVGKLRYPFLNL----TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV- 303 + + + +L + + + + + + +A L Sbjct: 388 AVDWMSITHPEDVQADLDNMALMNAGRIPGFTMEKRYFRPDRSIVWVRMTIAPLRGEKGS 447 Query: 304 --CLLYMVRIYHRSEWLNRRWH 323 L M+ + + Sbjct: 448 SPQHLCMIEDITERKQADEALR 469 Score = 55.4 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 19/185 (10%), Positives = 35/185 (18%), Gaps = 16/185 (8%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK-EKRAFTLSW 219 +I V ++ + + I A R E + W Sbjct: 429 RSIVWVRMTIAPLRGEKGSSPQHLCMIEDITERKQADEALRESKDLLRSIIEHAPIRVFW 488 Query: 220 LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN--Y 277 A S L + + V F +G + + V + Sbjct: 489 KDAQSRYLGCNSAFAHDAGLTQPEELVGKSDFDMGWREQAELYRTDDHRVMASGEAKLGF 548 Query: 278 NQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + L L LL + + + Sbjct: 549 EEPQTTPEGRHIWLRTSKVPLRSAAGELFGLLGIYEDITQRKEAELELLQ---------- 598 Query: 335 PNFRA 339 N Sbjct: 599 ANRAL 603 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 21/203 (10%), Positives = 45/203 (22%), Gaps = 9/203 (4%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFP--LKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 LG++ L+ +F P L F ++ + ++ +F + Sbjct: 19 FVLLGVLFAALFWIGESLLHFYFFEPGNLSHDLFPTVYHEMWMRMFIVCMFLGFGFFTQR 78 Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 RM + ++ + S W+ A L D I Sbjct: 79 IDDA-RMRAEIRRGEEQFKALMDVSPEAIAVHQGGLWVYANDAAAKLFGGKQPEDIIGRQ 137 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL-AVLISF 301 ++ + V + + LQ T Sbjct: 138 VMEFVHPDDHIVVQERMRQLFE-----GEALTPKLEERLLQPGGTSILAEVYALRTEFDG 192 Query: 302 SVCLLYMVRIYHRSEWLNRRWHL 324 ++ + R Sbjct: 193 KPAVMVVARDIDERRRAELELQR 215 Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 16/172 (9%), Positives = 33/172 (19%), Gaps = 5/172 (2%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 +++ + + R I A++ +R ++ A Sbjct: 170 RLLQPGGTSILAEVYALRTEFDGKPAVMVVARDIDERRRAELELQRSELRLKEAQRVAHL 229 Query: 217 LSWLAA--LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 SW + L G + + T+ Y T +V Sbjct: 230 GSWELDLLENSLWWSDENYRIFGVEPGSVNTYDTFLATVHPDDKVYVDRAYTASVKNRTP 289 Query: 275 LNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWH 323 N L + + S Sbjct: 290 YNIEHRLLLPDGLVKWVNERCETYYHDDGTPLRSAGTTLDITESRHSADVIR 341 >UniRef50_UPI0001850D38 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850D38 Length = 446 Score = 630 bits (1625), Expect = e-179, Method: Composition-based stats. Identities = 86/432 (19%), Positives = 173/432 (40%), Gaps = 15/432 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAGKSFCCLRIDNLEFMS 364 + A DPLT + N + + + + +D + ++ Sbjct: 2 IVELLKVQTDLEYLAHFDPLTNVYNRNYFIDKFKDFVFYADDKDEMALLFIDLDRFKIIN 61 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + ++ + L+ + +E + +L G E ++++ + + + Sbjct: 62 DMLGHLEGDTVLKGVAERLMNVCKEENVIGRLGGDEFIILVPKIRHMDDVLILAQNIINT 121 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 S + F + + +Q L+ + ++ + Sbjct: 122 LSLPYKLKGGEYYITASVGISVFPQDGDDIQTLIKNADIAMYSAKERGKN-NYQFFDDAI 180 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + +V + +R A+++ +L L+ QP N + EG + ++ + G ++P F Sbjct: 181 KEKIVSKVQIEQELRHAIERNELELHYQPQVNIQTGKIEGVEALIRWMSPTLGFVSPATF 240 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + +LE+ K SVN+ + + + + Sbjct: 241 IPIAEDSGMIMEIGNWILETAAKQAKVWHDMGYSELTMSVNISMIQFMNPTLIQSVNHAL 300 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + ++P + LEITE A S E + +L + A+DDFGTGY++ LK L Sbjct: 301 NKSSLNPSFLKLEITETVAMSEPELVREILLRLKELNIEFALDDFGTGYSSLNYLKNLPV 360 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 DI+KID F++DI + D IVR++ ++A + + V+AE VET Q + L ++ LQ Sbjct: 361 DILKIDRSFIQDIDIDKNDFTIVRALIEVAHSLGMLVIAEGVETTSQLSKLGEVNCDMLQ 420 Query: 718 GYLIGRPQPLAD 729 GY+ RP P + Sbjct: 421 GYVFSRPLPANE 432 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 107/533 (20%), Positives = 195/533 (36%), Gaps = 24/533 (4%) Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST---LCLL 275 L L + + L + + + L + + A Sbjct: 56 DLILLDIKMPELDGYRVCELLQAEEKTRHIPVIFLSALQDGGDKMKAFQAGGVDYITKPF 115 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR-SEWLNRRWHLQALTDPLTLL 334 + + + T +L L + L V+ E ++ AL DPLT L Sbjct: 116 QFEEVLARVS-THLALQATRRELRQLNAQLEQQVKERTAALEKAQQKLSYDALHDPLTGL 174 Query: 335 PNFRALEQA----PEQEA-----GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 PN + ++ + L +D + ++ G + + +I RTL Sbjct: 175 PNRSLFLERVGRSLQRAQEEKDYSFAVLSLDLDRFKVVNESDGHRVGDRLLVAISRTLET 234 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWG 442 L+ + + +L G E ++L + + + Sbjct: 235 LVGSTDTVARLGGDEFAILLEKIADVNEAIRTTQTIKKQFVSPFQLTEREIFTSPSIGLT 294 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + +L ++ + +E + Q K + L +R A++ Sbjct: 295 FSSPKYKHPEEILRDADIAMARAKQKGRGR-YEVFDEEMHTQALKLLNLETDLRRAIENQ 353 Query: 503 DLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L+Y QPI + G++ ++ G ++P +F+P+ + L VL+ Sbjct: 354 EFLVYYQPIMALEKTKIVGFEALIRWQHPKKGFISPGEFIPIAEETGLIIPIGQIVLKEA 413 Query: 560 LKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + L T SVNL L + I I + P+++ LEITE Sbjct: 414 CQQLKTWQEKLPKAKNLTISVNLSSQQLKEPEILQHIDHSLNVTGLQPESLKLEITESLL 473 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 NA+ + + QL + +I++DDFGTGY++ L R D +KID FV I + Sbjct: 474 MENADVATTLLRQLKERKIQISLDDFGTGYSSLSYLHRFPVDTLKIDRSFVNCIGKPEEN 533 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I++SI LA + VVAE +ET++Q L L ++ QGY +P P + Sbjct: 534 LTIIQSIMALAHNLDMDVVAEGIETEKQLTFLKFLECEFGQGYFFSKPLPSHE 586 >UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT05_CHRVO Length = 825 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 107/611 (17%), Positives = 204/611 (33%), Gaps = 27/611 (4%) Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLS----LFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + + ++ G A I + + R IV Sbjct: 190 AAAVSDAISLARDHGQALDIQFRARTGAEQDERWLRARARCFDDGEPGRRIVGVLQDITG 249 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL-LLCTPYENDFIAGYLVPVFFII-FTLGVGK 257 RR + + A+ ++ GY + + Sbjct: 250 QRRTEERLRQAATVFDSTAEGIAILDARRKVVSVNPAFTQQTGYSPEEAMAWPDIDPLYQ 309 Query: 258 LRYPFLNLT--WAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIY 312 F+ + + L N N+L ++ ++++ + + Sbjct: 310 TPNNFIQPSSPASPEERKLWQGNVNYLHKNGKVLNIWESISIVPGPDGGVANYVLVFSDI 369 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 + A DPLT L N R L+ ++ + + +D+ + ++ Sbjct: 370 SSVLAAQEQLDYLAKHDPLTNLCNRRMLQDRMEYELAQAMRRQKMMAVLLIDLDHFKTIN 429 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 G + +I L ++ ++ + +L G E +VL E+ G + M L Sbjct: 430 DSLGHGHGDQLLATIATRLQGSVRASDTVARLGGDEFCIVLGDIESPGDVDLMGQKLLQR 489 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + + + LL + + Sbjct: 490 LAEPVRLEQMVCYVTGSIGISMAPTDGMGVDELLRNADQAMYGAKHAGRNR-YCFFAPAM 548 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 ++ + + + AL+QG L QPI + + +L G++ P F Sbjct: 549 QKAAEVRLQISSGLHLALEQGQFRLEFQPIVDLSCGRIRKAEALLRWHHPQHGVINPAVF 608 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + L A+ V + L ++ + R ++N+ L R + Sbjct: 609 IPIAEECGLIAKICEWVYDQALDFIRAWRDMLRDDLRIAINVSALHFRDLRNPVRWLDKL 668 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 R + +A++LEITE ++ G +IA+DDFGTGY+ LKR + Sbjct: 669 TRAGVPGEALMLEITESLLLDADHKVQEALDLYRAAGIQIALDDFGTGYSALSYLKRYRL 728 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV I D + +I +A L+V+AE VET Q A+L ++ Q Sbjct: 729 DYLKIDQAFVGQIAEEPRDHALCEAIVVMAHKLGLNVIAEGVETPAQAAILQACRCEHAQ 788 Query: 718 GYLIGRPQPLA 728 G+L RP P Sbjct: 789 GFLYSRPLPAE 799 Score = 44.6 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 15/204 (7%), Positives = 41/204 (20%), Gaps = 9/204 (4%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 G+ + + + +S + +A + + + + +M + Sbjct: 64 GVNAACEIYRRHKIPIVFLSAYAENATLQRAESAMPYGYLVKPVSPRELHATLQMAMVRF 123 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAAL--SVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 Q + + A W + + + T E Sbjct: 124 GIQRRADEQLGRMGKAMQAAELDVWEWRVETDQMQMFSLTGSEPLASGLAGNESIRHFIE 183 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE---TEYSLAFILAVLISFS--VCLLY 307 + + + F E L ++ Sbjct: 184 QVDARDAAAVSDAISLARDHGQA-LDIQFRARTGAEQDERWLRARARCFDDGEPGRRIVG 242 Query: 308 MVRIYHRSEWLNRRWHLQAL-TDP 330 +++ R A D Sbjct: 243 VLQDITGQRRTEERLRQAATVFDS 266 >UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WB0_RHOFD Length = 499 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 96/451 (21%), Positives = 175/451 (38%), Gaps = 16/451 (3%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 L + + ++ + + QA D LT LPN Sbjct: 40 VTLNAVPDGVLRIVCV-HDLSERKKFEESLRYQATHDELTGLPNRWLFHLHLSQALVRAR 98 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D ++ +G + + + ++EN+ L +L G E ++ Sbjct: 99 RTGLRVAVLFLDLDYFRSVNDSFGHTTGDALLVQVGTRIRSTLRENDTLARLGGDEFAIL 158 Query: 405 LSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ + + + L + + G + + + LL Sbjct: 159 LADMKNVDEAVRVASKLLLSLQASYRLQDQDVYSGGSLGLAFYPDDAQDSDTLLRYADMA 218 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 Q+ + + + + + L ++ A+ QG L L+ QP + G Sbjct: 219 MYQAKQAGRG-GYACYSQEMDLRGHENMRLHTRLKEAMAQGILQLHYQPQVDVESGAIVG 277 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 + +L + G ++P +F+P+ L VLE+ + +A R +VN Sbjct: 278 AEALLRWHDPELGHVSPARFIPVAEATGLILPLSDWVLETACQQIAAWTQAGTPLRVAVN 337 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + Q+N+ ++ R Q + +EITE A + + ++ L G RIA Sbjct: 338 VSAQQFRQRNLPEQVRAALARTGAQAQWLDIEITESVAMTQPAQAREQLDALVGLGCRIA 397 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LK L +KID F+ I + D I R+I LAK+ L++VAE Sbjct: 398 LDDFGTGYSSLAYLKALPVSKLKIDKSFMDGIPQDANDVAISRAIIALAKSLGLTLVAEG 457 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q A L + G + QG+L + + + Sbjct: 458 VETDAQLAFLRQYGCEVYQGWLFAKAMTVQE 488 >UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M8T6_METRJ Length = 776 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 108/739 (14%), Positives = 223/739 (30%), Gaps = 44/739 (5%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVML-----SILFIFGWRGVVPVLCGMFCTNLWNFHL 81 + P A + + +I G++ + + Sbjct: 26 VDGLYQPFASLAVGAASGTIVATAAAFWSDDWAITLTAFAVGLIGLTRVLLARVYLTKGP 85 Query: 82 SFLQTA------VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 +G+ + + + + G+ Sbjct: 86 EKYDRHEIWETYFSVGAFAYAASLGILSFLITTRSSNLALQVITPTFTIGYAAGISGRNA 145 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + + + D + +LSL A + ++ ++ + Sbjct: 146 GRPLLAIAQVVLSAMPLSAGLLVSGDGERASLGILSLLFAYGMIDITLSTREIIVSALVT 205 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---YENDFIAGYLVPVFFIIFT 252 + A + + + + + + F++ +P I T Sbjct: 206 TREK-EALAAKFQAQANLFDIALRNMSHGLCMFDARGRLQVWNDQFLSISGIPSSRI-HT 263 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--------- 303 + Y + + F S +L + V Sbjct: 264 NSTARSLYKLSRAIVDERSAGRGSTLSTFAAASNALRSGNLVLILPDDRVVSLMQRRTAE 323 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE----QAP----EQEAGKSFCC 354 + + R A D LT L N + + +A + + Sbjct: 324 KGYVIIFEDITERRRNEARIQQMASYDDLTGLLNRSSFKAKVSEALKASARSKGDFAVHL 383 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D+ + ++ G ++ + L + + + +L G E ++V + Sbjct: 384 LDLDHFKVINDTLGHPAGDRLLQMVADRLRGIGALSGSVARLGGDEFVIVQQSVTSPAVA 443 Query: 415 QHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + T + +G + LL Sbjct: 444 EDLARRVLQELERPFDIDGTHVTVGASIGIAIAPFHANDEDRLLKCADIALYAIKGAGR- 502 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + + T + L + +R AL G+L L+ QPI + + +L Sbjct: 503 SGFKIFQHEMEAATRARHALESDLRAALTNGELELHYQPIVDSSTGAIVSCEALLRWHHP 562 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G + P F+P+ L + VL + P +VN+ P Sbjct: 563 VSGYIPPSDFIPVAEDTGLIVQLGNWVLNEACREARKWPST---VSVAVNMSPRQFGDPQ 619 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +A +I R + + LEITE + I +L + G R++IDDFGTGY++ Sbjct: 620 LAFHVIGALNRSGLPAHRLELEITESVTLGATHKIVETINKLRQLGIRLSIDDFGTGYSS 679 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+ D +KID FV D+ I+R+I + ++ +++V E VET+ Q ++L Sbjct: 680 LSSLRNFAFDKLKIDRSFVSDLDRKAESTAIIRAIVGMGRSIGMAIVVEGVETETQLSIL 739 Query: 709 HKLGVQYLQGYLIGRPQPL 727 G +QGY+ RP Sbjct: 740 RTEGCDLIQGYVFSRPVAA 758 >UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLE3_9GAMM Length = 821 Score = 628 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 100/566 (17%), Positives = 194/566 (34%), Gaps = 30/566 (5%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAG--YLV 244 + E + +L A ++ L ++ T + + Sbjct: 227 EKKETTDRLNESVLELSRSESFSRSLMENAGDAMFLCKSDTSIVRTNRQAELTLKIDSNK 286 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-LAVLISFSV 303 + + +S + + + + + + + V + + Sbjct: 287 IIGRSLADFSESFTVAELEKRFDELSDDQVSTFEDLQIDSTGSAFPIEARGIKVHLEEQL 346 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCL 355 +L M R + ++ + A D LT + N R + + Sbjct: 347 YILIMARDITARKAAEKQVYELAFFDTLTGMANRRLFMDRLSSSLVLHQTNGKYGAVLYM 406 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ET 410 +D + ++ G +++I + ++ + G E +++L Sbjct: 407 DLDRFKTINDSLGHGAGDLLLKAISGRINSIIPTGATSARFGGDEFVILLPEAGIDKESC 466 Query: 411 EGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 H+ + + ++ L F +L + + A Sbjct: 467 IEAAAHLAEDIIQQFTDPFLVDSHSLYCTISVGIALFPEQNSNSGDILRRADTALYRVKA 526 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILAR 525 + + +++ + + A++ G+L L+ QP E G + +L Sbjct: 527 KSRN-GFQFYDPEMQSSAQERLNVEKGLHQAIEHGELELWYQPQIGAKGECIGAEALLRW 585 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPL 582 + G++ P F+ + VL + L R +VN+ PL Sbjct: 586 NHPERGLVFPGDFIQIAEDSGQIVEIGNWVLAQGVSQLKGWMERGLPSTFRRLAVNVSPL 645 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 +Q + R+ L I + LEITE +N E + ++ L K G AIDDF Sbjct: 646 QFMQVDFVDRVSTLLDESGIPGFMLELEITENMLLNNFEIASQKMKLLKKKGVSFAIDDF 705 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ + L+ L DI+KID FV D+ ++ A IV+ I A L V+AE VET Sbjct: 706 GTGYSSLKYLRHLPLDILKIDRSFVTDLRPHSEQAAIVQVIIATADRLDLVVIAEGVETT 765 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ L +LG QGYL +P Sbjct: 766 EECNTLSQLGCNCFQGYLFSKPVQAE 791 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 102/424 (24%), Positives = 186/424 (43%), Gaps = 16/424 (3%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 A DPLT LPN L + + + +D + ++ G + Sbjct: 527 EELKKMAYFDPLTGLPNRTLLRDRIESAIHFANRNGSKVAILFIDLDYFKTVNDTLGHDV 586 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW 428 + + + L + +E + + + G E + V+ + + + S Sbjct: 587 GDRILVQVAKRLSSVFRETDTVARFGGDEFVAVIPDVRDLKDVVQVAERILSLFSTPFEA 646 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N + + + N E L+ ++ E ++ + + Sbjct: 647 NGEDIYLSASVGIAVYPDNGENPTELIKNADMAMYRAKEEGK-SNFSFFTEEMNSKAVEI 705 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + + N + AL++G+ LLY QPI + G + +L D G+++P KF+P++ + Sbjct: 706 LSVKNKLHKALERGEFLLYYQPIYSLGDNSIVGLEALLRWRDPDRGLVSPAKFMPILEEL 765 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L V+ K G SVN+ P + +N R++++ + + + Sbjct: 766 GLVKEVGRWVMGEAFKKSREWGDR-YGIYVSVNISPRQFMDRNFVKRVLQIASDTNANNE 824 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 V+LEITE N E S+ +++L GF++A+DDFGTGY++ LKRL DIIK+D Sbjct: 825 HVVLEITETSLMRNPEESVSILKRLRAKGFKVAVDDFGTGYSSLAYLKRLPIDIIKVDMT 884 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F + +V + +D IV ++ L+K+ L +AE VET++Q +L +LG QGYL G+P Sbjct: 885 FTQGMVKSNVDRSIVMAVIGLSKSLGLKSLAEGVETREQVNILRELGCDLAQGYLFGKPM 944 Query: 726 PLAD 729 + Sbjct: 945 KEEE 948 >UniRef50_B6BNN5 Ggef/eal/pas/pac-domain containing protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNN5_9PROT Length = 835 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 104/575 (18%), Positives = 196/575 (34%), Gaps = 28/575 (4%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP------- 233 F L + I + R+ KE +A + + L T Sbjct: 257 AYFETLLKTIREKNEDLDESRKREEELQKKETAMNEAQSIARVGSWSIDLKTNTLSWSNE 316 Query: 234 -YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 Y I + + + + L + G + Sbjct: 317 CYNIFGIEHGTQMNYELFVEMIHKDDKENALLAWDEALKGAKFEIEHRVIVGS-ETKWVR 375 Query: 293 FILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 +I ++ V+ + + A D LT N L Sbjct: 376 EKAKFVIDEDGTIVSGIGTVQDITERKQYENKLERLANFDTLTGFANRTFLFSYLQKVVH 435 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + L +D+ + ++ YG + + I + L ++ + + +L G + Sbjct: 436 RCKRNNKIAALLVLDMDHFKDINDSYGHDIGDELLALIAKRLSTRIRGGDFIARLDGDKF 495 Query: 402 LLVLSGPETEGRLQHMVNILNSR---QIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++L + + +NT + + A N ET + L+ Sbjct: 496 AIILEDINNSDDAAMFAKEIMEEVEKPFYLSNTSEVHICSTAGIVIAPENAETAEELIQF 555 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NK 514 + + + ++ K + L +R A++ + LY QP +K Sbjct: 556 ADTALYKGKKDKRG-GISYYSDELTELAKKHIELATRLRRAIEHSEFELYYQPQVHIKSK 614 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 G + ++ G+++P+ F+PL + L V+ + Sbjct: 615 RIVGAEALIRWNDPIHGLISPNDFIPLAEETGLIGAIGEWVIRDACRQGKLWIDKGYNLS 674 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVN+ L +NI I K + +++E+TE E ++ + + G Sbjct: 675 ISVNVSANQLRHQNITRLIDSTLKETGFTADKLVIELTESAVMQREEEAVAMLHAIRAKG 734 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 R+AIDDFGTGY++Y LKR DI+KID F+ ++ D IV++I + A + Sbjct: 735 IRLAIDDFGTGYSSYSYLKRFPIDILKIDKSFIDEVPFENDDMAIVKAIIAMGSALGYKI 794 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE E +Q L + G QY QGY +P ++ Sbjct: 795 LAEGTEHIEQIDFLEEHGCQYYQGYYKSKPLKTSE 829 >UniRef50_A4VKH7 Sensory box/GGDEF family protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKH7_PSEU5 Length = 708 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 117/566 (20%), Positives = 207/566 (36%), Gaps = 28/566 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYL 243 ++ R + E R ++ A+ + I GY Sbjct: 129 VVEGFIEDITAQRAVLEALEQAELRYRSIFENASEGIFQSTRDGRYLAANPALARIYGYD 188 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF-----LQGVETEYSLAFILAVL 298 + + + Y A L + + T ++ V+ Sbjct: 189 SASELVADLADIERRLYVQPGRREAFCQLMEQHGEVLNFESEVYRRDCTRIWISENAHVV 248 Query: 299 ISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---- 351 + + V+ + ++ QA D LT LPN L EQ ++ Sbjct: 249 RGPNGEFICYEGTVQDISERKHYQQQLERQANHDLLTGLPNRILLNDRIEQGLARAARLG 308 Query: 352 ----FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + +DN +F++ G + ++SI L ++ ++ + ++ G E +LVL Sbjct: 309 YYLTLVFIDLDNFKFINDGLGHVAGDELLKSIAARLAGSLRGSDTVARVGGDEFVLVLGD 368 Query: 408 PETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + ++ + + + +G F + E Q LL Sbjct: 369 HYRISTVISLLERVLNEIRRPVTLAGREFQVGASLGVAMFPDDGEDAQTLLKHADIAMYA 428 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEI 522 + ++ +++ L +RTAL++ + ++ QP + G++ + Sbjct: 429 AKKRGRN-NFQFFTHDLNRIADERLNLEAAMRTALERDEFAVHYQPKVDAQRRIVGFEAL 487 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMP 581 D G++ PD+F+P+ + L L VL + +VNL P Sbjct: 488 ARWTHADLGVIGPDRFVPVAEESGLIMPLTLAVLRRAFSDARRWNAGRQVPLLVAVNLSP 547 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L L ++ R++ + +SP V LEITE + ++ + GFR+A+DD Sbjct: 548 LLFLGDDVVERVMAVLDEVGLSPLLVELEITETVFLGDGSRAVSILADFKARGFRLAMDD 607 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY+ L+R DIIKID V + AMI R+ L K+ +VVAE VE Sbjct: 608 FGTGYSALGYLRRFPLDIIKIDRSLVTGLEQEDEVAMIARAAISLGKSLHKTVVAEGVEN 667 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPL 727 Q L G QGYL+ RP P Sbjct: 668 AAQFEFLRHNGCDEFQGYLLSRPLPA 693 >UniRef50_Q0AMK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Maricaulis maris MCS10 RepID=Q0AMK4_MARMM Length = 809 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 112/748 (14%), Positives = 230/748 (30%), Gaps = 44/748 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + + I+ F + + L + S + + +I Sbjct: 50 LLFAGFVTGTGIWGTHFVSMLAYESVVPIAFGLLETVISLALAIIVSACGWAFAIR---- 105 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT--- 117 G + F+ M + F I L ++ + Sbjct: 106 SETRFAAPIGGALVGGGIAAMHFMGIEAMRTNAIFTWDAGLIIAAIVLAIQFSAAASTVA 165 Query: 118 -SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 + + L L+ G+ ++ ++ + ++ + V Sbjct: 166 MGKSLKPSLIGGTLLLVCGVVSLHFISMGAMQLVPDMTVAEPEGGLSPKLLAVTVALGVV 225 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN 236 + ++ + R A + A+ + Sbjct: 226 FVVSVGLATAAIDLHLGKRRMAEGARMRALAEAT-------FEGIAVVRDGQMYDMNGRF 278 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 + + + L ++ Sbjct: 279 CEMLNLAREDLVGTPIMKLAVDPEDIRVLQ---LDQDDAPTTCRLRCRDRAPITVQVRAR 335 Query: 297 VLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 V+ ++ R E R A D LT LPN +A E + Sbjct: 336 VMDFDGQSSRIFTFRDVSSEERARARITHLAHHDTLTGLPNRLKFREALEAELSSAWDND 395 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +D + ++ +G + ++ LL + N +L G E ++L Sbjct: 396 SQVALMFFDLDRFKEVNDVHGHATGDRLLVAVSERLLDALPRNAVAARLSGDEFAVILPD 455 Query: 408 PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ++ + + + + + L + F + E L+ Q + Sbjct: 456 VDSREDGLNTARRVVNNVGSPLSIGSLHLKVSASGGVTMFPLDGEDPDRLMNQADLALYR 515 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + + + + ++ +L + A++ L L QP + G++ Sbjct: 516 AKGQGRNQ-VCDFDPKLGMMMQERRMLEADLALAIEDDLLTLNYQPQVRLGDGSIAGFEA 574 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 ++ G + P +F+ + + L + VLE+ + P R +VN+ P Sbjct: 575 LVRWHDDRRGAVAPAEFVQIAEETGLILKMGEWVLETACREAVNWPN---DRRVAVNVSP 631 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q N+ + R + P + +EITE + ++ + L G +AIDD Sbjct: 632 AQFKQGNLVYSVQRALTNSGLDPARLEIEITEGVLIDDEARALKVLRGLKDLGVGLAIDD 691 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+ D IKID F+ + + +IVR+ LA+ +++VV E VE Sbjct: 692 FGTGYSSLSYLRAFPFDKIKIDRSFITGLQNDQEAQIIVRATIALARDLNIAVVVEGVE- 750 Query: 702 QQQQALLHKLGVQ---YLQGYLIGRPQP 726 + L LG Q LQGYL+ RP Sbjct: 751 --EFDELGALGYQPDLVLQGYLLSRPLT 776 >UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTV0_CHRVO Length = 1390 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 108/561 (19%), Positives = 209/561 (37%), Gaps = 29/561 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I + + A + + V + I GY Sbjct: 815 DITERKVFEQTQKEAAAVFDSS---YEGILMVNPDGV---ITKVNNAFSRITGYSAEEAI 868 Query: 249 ---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-- 303 + + L +V + Y+ ++V+ Sbjct: 869 GQKPSLLASGKQPISFYEELWNSVKGHDFWRGELWNRRKSGELYAELLSISVVRDEQGQV 928 Query: 304 -CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + + + + A DPLT +PN R L Q + C Sbjct: 929 QHYIGIFSDITQLKQHEAELDRVAHYDPLTGVPNRRLLSDRLRQAIVRANRSGRSCAVCF 988 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ YG + + ++ L +++ ++ L +L G E +++LS + Sbjct: 989 LDLDGFKAVNDKYGHAVGDQLLVTVSNNLKSILRGDDTLARLGGDEFVVLLSEVGSPEEC 1048 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 +++ + SR + + + + + + LL + Sbjct: 1049 MLVLDRVLATASRPMPVGDAEVGVTASIGVSLYPQDNVDPDTLLRHADQAMYLAKDAGKN 1108 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + + + L +R AL + L+ QP+ + E + ++ Sbjct: 1109 R-YQLFDPENDRKAQEHRQFLELLRQALVHDEFALFYQPVVDLQSGEIISVEALIRWRHP 1167 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G++ P +FLP ++ L A F L VL++ L ++ + S N+ LL+ + Sbjct: 1168 RRGLLAPAEFLPHLSGNELEAAFGLWVLDAALSQVSRWAEAGFHIKISTNVSTNYLLRTD 1227 Query: 589 IAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ + RY ++ P + LEI E + + E ++ +++ + G A+DDFGTG+A Sbjct: 1228 FSQQLSTVLGRYPNVPPWHLELEIVESAS-GDVEQTIRVLQRCRELGVHFALDDFGTGHA 1286 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+RL D +KID FV D++ + D IV + +LA + +AE VET + AL Sbjct: 1287 SLTHLRRLPVDTLKIDNSFVHDMIGSQDDRRIVEGVIELASIFARKAIAEGVETMEHAAL 1346 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L LG Y QG+ I RP Sbjct: 1347 LRSLGCHYAQGFGIARPMEAD 1367 Score = 69.2 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 23/323 (7%), Positives = 69/323 (21%), Gaps = 22/323 (6%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L + L L+ ++ +PL + + F+ ++ + + Sbjct: 11 LLAVSSYALFALAWIFFSDQLLAGLDAS-RVVPLSIAKGVFFVLVTSILLLLALRAVPSR 69 Query: 76 LWNFHLSFLQTAVMLG----SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 L++L ++ A L ++ + + L ++ Sbjct: 70 EGGAQLAWLGNLANGMRSERWTNWLAYPAVLALVAGALALRQFLMGPELGAHPMLILFML 129 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 I C + L + + L++ L ++ Sbjct: 130 PIILGACMGGIGPGLLATVLSVLAVDLMVEPHLHAAQTPWHSKVQLLFLALNGLAVSLLC 189 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPV 246 + + + +V + L G Sbjct: 190 EMLRQALERVALHRAL------LDAVVSSTSDAVFVKDVQGRYLLVNQAALAFVGKTSGE 243 Query: 247 FFI---IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 R + + + + + ++ + + Sbjct: 244 VIGKDDRDVFDEETARELIIQDRLIMQSGRVQTHEEHLALQNGERMVFLVTKGPVYNHEG 303 Query: 304 ---CLLYMVRIYHRSEWLNRRWH 323 L + R R + + Sbjct: 304 LLGGLFGISRDITRQKQAENQLR 326 Score = 59.6 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 8/175 (4%), Positives = 28/175 (16%), Gaps = 13/175 (7%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 + D + ++ + I A R + Sbjct: 534 IDFRLARQDEGVRWLQARGRAVEWDERGAAVRLVGNLSDITERKRADEDLRLVL------ 587 Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG--VGKLRYPFLNLTWA 268 + + + + G+ + + + Sbjct: 588 NEAGDAIWVTDVDGYFIF---ANPAACRLTGHSLDDLREMHIHDLVAPECLGLLAEHLAK 644 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 ++ L S+ + + R + Sbjct: 645 INNGAFLRSEWKLRLKKSGTVSVDLTSGKMKD--GRYIAFGRDLTEQHRAEQELR 697 Score = 59.6 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 11/149 (7%), Positives = 26/149 (17%), Gaps = 14/149 (9%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-LLCTPYENDFIAG 241 + R + H A+ R + W L + + G Sbjct: 679 YIAFGRDLTEQHRAEQELRDRERQLARVIAGSDQGFW---DWNLETNRFQVSPRWESMLG 735 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWA------VSTLCLLNYNQNFLQGVETEYSLAFIL 295 Y I + + T + + Sbjct: 736 YGPGEMHITADSWYEHVHPEDVERTRDSIQRNLSGEMKSHEVEIRCRTRGGDWRWILSRG 795 Query: 296 AVL----ISFSVCLLYMVRIYHRSEWLNR 320 V+ + + + + Sbjct: 796 RVVERNDRGEPLSMSGTHTDITERKVFEQ 824 Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 12/144 (8%), Positives = 26/144 (18%), Gaps = 15/144 (10%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPV--- 246 +R E R ++ + L + + G Sbjct: 441 QDITERKRMAMQVKASESRLQLVAEATSDGFWDWDLRSGKVYRSSRYYEVTGTQPEDDSG 500 Query: 247 -FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ--NFLQGVETEYSLAFILAVL----I 299 F + L A + E L + Sbjct: 501 DFRFFRQMVHPADLPYVLQAIEAHRRGKTPRIEIDFRLARQDEGVRWLQARGRAVEWDER 560 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWH 323 +V L+ + + + Sbjct: 561 GAAVRLVGNLSDITERKRADEDLR 584 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/322 (9%), Positives = 73/322 (22%), Gaps = 16/322 (4%) Query: 15 TLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT 74 + +L + ++ ++ + A P + +LF+ V +LC M Sbjct: 136 CMGGIGPGLLATVLSVLAVDLMVEPH-LHAAQTPWHSKVQLLFLALNGLAVSLLCEMLRQ 194 Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRL------FWL 128 L L ++ S + V R+ L + + + + + Sbjct: 195 ALERVALHRALLDAVVSSTSDAVFVKDVQGRYLLVNQAALAFVGKTSGEVIGKDDRDVFD 254 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 I + + + ++R Sbjct: 255 EETARELIIQDRLI-MQSGRVQTHEEHLALQNGERMVFLVTKGPVYNHEGLLGGLFGISR 313 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF 248 I A+ R A ++ A SW V +P Sbjct: 314 DITRQKQAENQLRDSEAMLQQAQQLAGIGSWSW-DLVDDRQSWSPEAYRLFGLTEKSGPP 372 Query: 249 IIFTLGVGKLRYPFLNLTWAVST----LCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + + L+ AV + L+ L Sbjct: 373 GYPAMRRYFDADGWAQLSEAVERCKLVGMGYECDVELLRADGESRWLTMRGEARRDEEGA 432 Query: 305 LL---YMVRIYHRSEWLNRRWH 323 ++ ++ + + + Sbjct: 433 IVSLYGTMQDITERKRMAMQVK 454 >UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE71_9SPHN Length = 749 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 126/722 (17%), Positives = 234/722 (32%), Gaps = 44/722 (6%) Query: 39 SSYIFLAWMPLCVMLSILFIFGWR------GVVPVLCGMFCTNLWNFHLSFLQTAVMLGS 92 +A + + + ++ + + + T + Sbjct: 26 HVNSAVAGITISAAFASATMYSSGHHLEVIAWFVAVAAIGLARVLLLRPGLRGTGEISAI 85 Query: 93 QTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLK 152 L A+ + + + + F + ++ + S G+ Sbjct: 86 AKCKSLVILALANGVVWGLGGFAAATVATPGQFFMISILLSGMMGASAMSYGAIAMPVPA 145 Query: 153 ISTFFGDADAIFTVVDLLS-LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 G V + L T + L R S + I R + Sbjct: 146 FVVPAGLGFLAVWVAFPDAPLATGSIATIAYVAVLIRGAFSNERSFIAKLRAEERATDSA 205 Query: 212 KRAFTLS----WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 + L A+ + + I + G+ FL+L Sbjct: 206 ETVRLLMNDFTEQASDWLWEIDGGLR-----IVNPSDRFIHVAGREGLQLSGKAFLDLFD 260 Query: 268 AVSTLCLLNYNQNFLQG----------VETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 S L + A + + Sbjct: 261 ETSERRQLESELRNRRVFRKLTLPLTISGKRRWWALSARPCE-ANGGFRGVASDVTAQRE 319 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQE-------AGKSFCCLRIDNLEFMSRHYGLM 370 R + A D LT L N + + L +D + ++ G Sbjct: 320 AEARINHMAHYDALTNLANRYLFNASLDHALNRLLDRHRICVLYLDLDQFKGINDTLGHA 379 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIH 427 + +R + + L + + +L G E ++L + + + + Sbjct: 380 VGDALLREVGKRLENTLNGRGLVARLGGDEFAVLLQDENLDHVAMTIAHRIMENLRDPYV 439 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + +G D + L+ ++ + E + Sbjct: 440 IEGSEICIGTSIGVAFADPQGPSASDLMKHADLALYRAKELGRGKVV-VFESALVEFALA 498 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L +RTAL GDL L+ QP+ + + GY+ ++ + G++ PD+F+PL Q Sbjct: 499 RRELEMDLRTALTDGDLRLHFQPLMDLQTNKILGYEALVRWHHPERGLILPDEFIPLAEQ 558 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L V+ P + S+NL P L + ++ I+P Sbjct: 559 TGLIVELGEWVIREAAATARLLPGE---LTISINLSPAQLRSSQLLATVVSAVAHAGIAP 615 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE ++E M + +L FG RIA+DDFGTGY+++ L+R + IKID Sbjct: 616 SRLELEITEGVFLEDSEDCMRILRELRTFGVRIALDDFGTGYSSFGYLRRFPFNTIKIDR 675 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV ++ + IVR+I+DLA +SV AE +E Q ++L LG + QG+L+G+P Sbjct: 676 SFVAELRESDDCRRIVRAISDLAHGMGMSVTAEGIEDVSQLSMLRDLGCEVGQGFLLGKP 735 Query: 725 QP 726 P Sbjct: 736 MP 737 >UniRef50_C7MR68 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Actinomycetales RepID=C7MR68_SACVD Length = 919 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 100/608 (16%), Positives = 216/608 (35%), Gaps = 21/608 (3%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 + + + +A+ L++ + + + + + + + Sbjct: 311 LVGVTLDPATIVAEGGVVEAEHRKADGSALTVRVSASPMDDGYVLMCADETARRTVERRY 370 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R + + L + + + G +F + G Sbjct: 371 RTVVTALDEGVVVIDE-NELVGSANPAAGRILGLPVEAMIGCSPALFPLYDESGARVPPS 429 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEW 317 + + + + L+ L S ++ Sbjct: 430 EYPSALTRRTGHASHGRVLRARRPDGQWVWLSMSCRPLDSDKTPPHEVVVSFTDITERRA 489 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKSFCCLRIDNLEFMSRHYGLMM 371 + R A DPLT L N + Q E+ + +D + ++ G + Sbjct: 490 IGERLEHDATHDPLTNLANRTLILQRLEEMLRRSGGRPVCVLFIDLDKFKVINDSLGHGI 549 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 +R L +++ + + +L G E +V S + ++Q ++ + + + Sbjct: 550 GDEVLRIAGERLKNCVRQGDLVGRLGGDEFAIVASDMAHDSQIQALIGRIRRALTEPVVV 609 Query: 429 NNTGLDMGYGAAW-GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 L + ++ + + LL Q+ + + + + + Sbjct: 610 EGRRLRIDASIGVVTTHADDERSAEDLLRDADVAMYQAKTRGRGR-YEFFDVELRERVQR 668 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQ 544 Q+ L +R ++ G L + QP+ + + +L G ++P +F+PL + Sbjct: 669 QLRLEQDLRESVRGGQLWVAYQPVVDLRTQQRVAVEGLLRWDHPVHGRISPGEFIPLAEE 728 Query: 545 FNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 +L +L + + LA+ + +VN+ L ++ + + + Sbjct: 729 SDLINLIGGHMLRTATRELASRRRHSGVRTQLAVNVSARQLDDGSVVSAVNEALRATGLP 788 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + LEITE E++ + L G R+AIDDFGTGY++ +L +L D +KID Sbjct: 789 PGELCLEITESALMQEPEAAADVLTALRDLGVRLAIDDFGTGYSSLAQLWKLPLDTLKID 848 Query: 664 GVFVKDI--VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 FV + + I++ I +A + L+VVAE E ++Q A+L +LG QG+ + Sbjct: 849 RSFVAGLDGPNHPDAEAIIKGIITMAHSMGLTVVAEGTENERQIAILRELGCDQAQGFHL 908 Query: 722 GRPQPLAD 729 G+P P + Sbjct: 909 GKPAPAHE 916 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 11/150 (7%), Positives = 26/150 (17%), Gaps = 10/150 (6%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDF---I 239 +V + R L L+ + + L+ Sbjct: 117 VERLVGIATDVTERFNNTRELDDLADRYRLLVELSPEGICVHQDGKLVYINPAAARFVKA 176 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYSLA-FILA 296 A + I L ++ + + Sbjct: 177 ASPTQLLGRPITDFVRPAAVPELLRRISSLREPGEATEPTEVRLRTLDGGSLCIESVSVR 236 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + ++R + QA Sbjct: 237 ITWRGKPAYQVIMRDITAQKAAQAALRYQA 266 >UniRef50_Q3IEF5 Putative uncharacterized protein n=3 Tax=Alteromonadales RepID=Q3IEF5_PSEHT Length = 751 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 96/581 (16%), Positives = 192/581 (33%), Gaps = 27/581 (4%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 L L +I RM + + ++ + Sbjct: 152 WLWVLDRGKIIEKDTNLSPLRMTGTVR-DISQLKLTEERL----NLFAKCVESLTDALAI 206 Query: 228 LL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + + G + + G + + V L Sbjct: 207 YDKNFKLVDINPSFLTLFGGVREQYLKKDFNLPGYDKSYINTIKKTVYQRDSLQQEVKLR 266 Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + + + + + + H + D T LPN Sbjct: 267 NSAHVLLPIEISIDEIRNDQNQITNYVVVYSDLTERKKAESQLHNLSNRDRTTNLPNRNL 326 Query: 340 LEQAPEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 ++ + + +DN + ++ G + + + L L +EN+ Y+ Sbjct: 327 FFTDLQKLGQLNSHHALLVFDLDNFKKINDSLGHQLGDSLLAKLAMRLNKLTRENDVFYR 386 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E LV+S + + L + F + T + Sbjct: 387 LGGDEFALVMSDTNDIYTITRTAKQFLAAIATPFKMAGHELAITSSVGIVLFPEDGNTPE 446 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL + + + ++ + K++ + N +R L + +Y QP Sbjct: 447 LLLKNADTAMYHAKKKG--NSYLFFNDTMNREAVKRLQIENLMRFGLKENHFAVYYQPKM 504 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N + G + ++ + GI++P F+P+ + VL + + Sbjct: 505 NIHTGKLVGMEALVRFITPKKGIISPGVFIPIAEETGQIIEIGEVVLNKACRDVKEWLDA 564 Query: 570 KK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 R +VNL ++ RI + ++ + + LEITE + + ++ + Sbjct: 565 GLFNGRVAVNLSAKQFSLPDLTTRIDVILQKNALPSYFLELEITEGTVMDDPKDAIAIMC 624 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L G +A+DDFGTGY++ LK+ + +K+D F+ D+ N +V SI +A Sbjct: 625 SLSARGIHLAMDDFGTGYSSLAYLKQFPLNTLKVDKAFIDDM-KNERGRNMVDSIVTIAH 683 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VE Q +L +L + +QGY +P + Sbjct: 684 NLDLHVVAEGVEQASQIEILKQLNCETVQGYYYSKPLSKDE 724 >UniRef50_A3YH84 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YH84_9GAMM Length = 1052 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 103/566 (18%), Positives = 210/566 (37%), Gaps = 27/566 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY 242 + R I + Q R + +S +L + G+ Sbjct: 466 IISIARDISQSYKQQEENRLLATFFKQSSEGMVIVSKR------GRILTVNPALVSMTGF 519 Query: 243 LVPVFFII--FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + +++ + + ++ + I ++ Sbjct: 520 SPEQLIGSSFRKVLSNASYQAYRSMSVDLKNVGKWQGEMEYITLSQQSQPGWVIATSVLD 579 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAG 349 + + + + + A D LT LPN L Q +Q+ Sbjct: 580 ENGQISHFVASFSDISKLKRSQHKLQHLAHHDALTGLPNRTFLTQKLSGMISNARKQDKQ 639 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + +R I + + ++ENE + ++ G E +L+L + Sbjct: 640 LAVAFLDLDRFKNINDTLGHLFGDKLLRVIAQRMYNQLKENEVVARIGGDEFILILDPSD 699 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 L + L ++ + + + + + + L + Sbjct: 700 GLEALSARLEALNQKIQEMVYIDGKEIMTCASIGVSLYPEDGTSSELLFQHADTALYSAK 759 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 + +S Q +++ + + + AL+ ++ L QPI + ++ + +L Sbjct: 760 EAGRAM-HKLYASSLSIQAKERLDIESHLAKALEYKEMSLVYQPIYDFKQQKFVKVEALL 818 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPL 582 G + PDKF+P+ + VLE+ + +A R +VN+ + Sbjct: 819 RWNTPKLGQVPPDKFIPIAEETGGILTIGNWVLETACRTMAQWQQASCQIQRIAVNVSRI 878 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + ++NI + + PQ + +E+TE + ++ + + QL +FG I+IDDF Sbjct: 879 QIARQNIFETVKEILILTQCKPQWIEIEVTESAIMNLSKEGLKQLTQLKEFGVSISIDDF 938 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTG ++ LK L +KID FV+D+ N D I R I ++K ++ VAE VET Sbjct: 939 GTGQSSLSSLKTLPVSTLKIDKSFVQDMPENENDVEIARLILQMSKVLNVRSVAEGVETT 998 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q +L +G QGYL +P Sbjct: 999 EQAQVLKSMGCDLCQGYLFSKPLSEE 1024 >UniRef50_A1TMD5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TMD5_ACIAC Length = 687 Score = 627 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 116/679 (17%), Positives = 225/679 (33%), Gaps = 33/679 (4%) Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + + ++ G + + L L + R L R + Sbjct: 1 MNRPAVDVAWRSLFAGLREALWLVDAQSLDVVMCNRAAAELAGRPREAMEGRPVHLLANT 60 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + I ++ G ++V + AV + + M+ Sbjct: 61 PEDLAFWSQDLAGLRAGIHSYSGMLRPDGSLVPVDRRVAAVESPEGMPLLVLGML----- 115 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN------------DFIAGYL 243 + AA +L+ + D + Sbjct: 116 DRSEQASIQDELERLLSELRATLDSAADGMLVCDMGGRVRAFNQRLAWLWNMPDDLLVRR 175 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + ++ T + + + Sbjct: 176 DDAAVEAHMAAQVTDADAYRARLLGIAQFPEEETLDILHLRTGTVIERRSVPQMSHGRPM 235 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCL 355 +Y R +R A +D LT LPN L + A Q G + + Sbjct: 236 GRVYSFRDLTLQHAAQKRIEQLAYSDVLTGLPNRLLLSRCVASALETARAQGGGFAILFI 295 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + ++ + + L +++N+ L +L G E +L L + Sbjct: 296 DLDRFKIINDSLGHLFGDRVLQLVAQRLRGCLRQNDMLCRLGGDEFVLHL-DEGDASMAE 354 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + G + + ETL L+ Q + Sbjct: 355 AVACRILEEMRQPFMLDGMGFSIQCSIGIALHPRDGETLDDLIKQADTAMYRVKERGRG- 413 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + ++ ++ L + +R ALD+GD ++ QP + G + +L Sbjct: 414 SYGFYHPQMNADMLSRMQLEHAMRQALDRGDFAVHYQPQVEMASGRVVGAEALLRWNDPG 473 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G ++P F+PL + VLE ++ A +VN+ L Q Sbjct: 474 LGAVSPGVFIPLAEESGYIVTLGAWVLEQAIREAAEWMRAGTPLVVAVNVSALEFRQSGF 533 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R++ L + + + + LE+TE +A+ + L + G ++IDDFGTGY++ Sbjct: 534 VERLVALLRSHGLPASLLELELTETILLQDAQEMAQRLAALAELGVGLSIDDFGTGYSSL 593 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+L+ +KID FV+ + + D I+ +I + +A + VVAE VET QQ+ L Sbjct: 594 AYLKKLRIHKLKIDQSFVRGLPDDESDRAIIEAIVHIGRALRIRVVAEGVETPQQREALQ 653 Query: 710 KLGVQYLQGYLIGRPQPLA 728 L Y QG+L+ P Sbjct: 654 ALQCHYFQGFLVAPGLPAE 672 >UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG75_THIDA Length = 954 Score = 627 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 135/740 (18%), Positives = 249/740 (33%), Gaps = 47/740 (6%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 F L + + + + + S+ + + GV+ + Sbjct: 214 FVFLTTLGAFTGADGGTQTLPETVAAIVGAGRFFVFSMEDAYLYPGVLGGFVTSGPSQGH 273 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 + ++ + L R L GLV P ++ Sbjct: 274 SAAELLIRHLDGMAM-------------RALPPIERSPNEYLLDAAELRKAGLVLPRALR 320 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 + L+ + F + + V+ L+SL +L++ + + Sbjct: 321 DDVRLINAAPTFYEANRPVILGSLFVAVVLLLISLVLLLLLFARKNRQIALASRQLGETK 380 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 R + W A + L G + Sbjct: 381 DSLDRAQRIAQMGNW-----DWYIAENRLFWSEGIYRLFGLRQGQFEASYEAFLVRVYPS 435 Query: 258 LRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYH 313 R A++T + ++ + + VL+ ++ V+ Sbjct: 436 DRAAVDAAVQRALNTGAPYALDHRIVRPDGSVRVVHETGEVLLDALGKPSRMIGTVQDVT 495 Query: 314 RSEWLNR-------RWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRID 358 + A DPLT LPN L + + +D Sbjct: 496 HWREAEQALREKDAHLEHVAYHDPLTDLPNRALLLDRLRAAVSRNGRTGGRLAVVFIDLD 555 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G + +++ L L ++ + L +L G E +L+L G + Sbjct: 556 RFKTINDSLGHAVGDAVLQAAASRLRSLTRDGDTLARLGGDEFVLLLDGLRDNAAAGAVA 615 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + R +H + L + + + + LL +S Sbjct: 616 EKIITALERMLHVGSYPLHISASIGISLYPEDGRDAEALLRHADAAMYKSKERGRN-TFH 674 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 E ++ + +++ L + +R A D L ++ QP+ G + +L + G Sbjct: 675 FYEHGITERAMRRLQLESRLRRAFDDRTLQVHYQPLVRLDTGHICGAEALLRWNDPEAGA 734 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNI 589 + PD F+ L L V+ + L + VNL LLQK++ Sbjct: 735 IPPDHFIALAEDTGLIVPIGEWVVGEACEALKRWETEILLPADFALHVNLSGKQLLQKDL 794 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R+ F R +SP V+LE+TE + + + + L +FG IAIDDFGTG+++ Sbjct: 795 PTRLSDAFTRAGVSPARVVLELTESSIMESEATGVAVMTALREFGVEIAIDDFGTGHSSL 854 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 RLK L +KID F++DI ++ DA IV++I L+ L V+AE VE +Q+A L Sbjct: 855 SRLKLLPISELKIDRSFIRDIAVDSDDAAIVQAILALSAKLGLGVIAEGVEHAEQEAFLM 914 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G QGY RP P + Sbjct: 915 QHGCLRAQGYRYARPMPEDE 934 >UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN4_CHRVO Length = 679 Score = 626 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 97/432 (22%), Positives = 171/432 (39%), Gaps = 19/432 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFM 363 R A DPLT LPN ++ + + + +D + + Sbjct: 232 IQERRRAEERLDHLAHHDPLTGLPNRLLFQKRLSRALSVPDLPPYKLAMLFIDLDRFKDV 291 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + ++ L ++ + L +L G E + VL E + L + Sbjct: 292 NDTLGHYIGDQLLNAVAARLADSIRAEDMLARLGGDEFICVLESIENRDMAADVAGKLLA 351 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + N L + + + LL + Sbjct: 352 LFRQPFCINGNDLYLSASIGISFAGNDGADVDTLLRHADIAMYSAKNAGRNRC-QHYSPQ 410 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 +S ++V+L +R ALD ++ ++ QP + + G + + G++ P + Sbjct: 411 MSEDAEQRVVLERQLRQALDNDEITVHYQPQVDAVTGKLVGAEALARWRHPILGMVPPAR 470 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + L Q+LE L+ LA+ SVNL L +++ + RL Sbjct: 471 FIPVAEECGLIVALGEQILEKSLRQLASWHEAGFPLPSVSVNLSARQLERQDFPQHVARL 530 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 KRY + P+ + LEITE + E ++ + +L G R++IDDFGTGY++ L++L Sbjct: 531 LKRYRLEPRHLELEITESVIMA-TEDAVNILAELRAQGIRLSIDDFGTGYSSLSYLRQLP 589 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 ++K+D F+ I IV +I L+ + L VAE VE Q L G + Sbjct: 590 VQVLKVDRSFILGIGKGGE--AIVHAIMALSSSLGLETVAEGVEEASQLEFLRSAGCHII 647 Query: 717 QGYLIGRPQPLA 728 QG+L P P Sbjct: 648 QGFLYAAPLPAE 659 >UniRef50_B1KF16 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KF16_SHEWM Length = 583 Score = 626 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 110/562 (19%), Positives = 197/562 (35%), Gaps = 32/562 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVP--VFFII 250 R I EKR L V L L ++GY + + Sbjct: 16 QAQNRLIEHLQASEKRYEDLVGHLRDVVFHLDLALKWTFLNQAWHGMSGYSIENSLGKYF 75 Query: 251 FTLGVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 + A+ L ++ F + + + Sbjct: 76 AENLSSQDTQKCTAGFQALLTKQLTEMSEEITFNTADNDKRIFELSCRAVKDETGQFAGF 135 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKSFCCLRIDN 359 ++ + A D LT + N R L + Q + + +DN Sbjct: 136 AGIITDITERIVAENKITFMAYHDALTGVANRRLLMEHLAQELTKPCGHCSALLYIDLDN 195 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLSGPETEGRLQ--- 415 + ++ HYG + + + L Q E + + ++ G E +L LS L Sbjct: 196 FKQVNDHYGHTVGDLLLCEVSDVLSEYAQDEEDLVARMGGDEFILFLSNLGENSALVTQK 255 Query: 416 --HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + S + + + D + + S Sbjct: 256 LVQITEKIRVQLSEPVLLGKLKIQITSSIGVVTLDHATMSHSDIFKYADAALYHSKNTGK 315 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLK 527 + +E + ++ L + + A+ + LLY QP + E + +L Sbjct: 316 NQ-VRFYDEELEQSERRRHQLEDELSQAITNEEFLLYYQPQVDAEGTTILKAEVLLRWQH 374 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQ 586 GI+ PD+F+P + ++ L +LE + L S+N+ Sbjct: 375 PRHGIVNPDEFIPHLEEYGLIIPVGKWILEESCRQLKVWHNAGKHELCLSINVSANQFKH 434 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + I ++ IS + + LE+TE A + S++ +++L + G RIA+DDFGTGY Sbjct: 435 PDFIEFIEICLIKHQISGEQIELELTEGVAIHDIPSTIKKMDRLQELGIRIALDDFGTGY 494 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK L + +KID FV+ + + DA IV + +A L+VVAE VE + Q A Sbjct: 495 SSLSYLKHLPINTLKIDQSFVQGLPHDGYDAAIVETTMVMAHHLGLTVVAEGVENRVQLA 554 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L K QG+L +P + Sbjct: 555 FLKKQQCHLYQGFLFSQPLNVD 576 >UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=10 Tax=Bradyrhizobiaceae RepID=Q07VI3_RHOP5 Length = 750 Score = 626 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 116/583 (19%), Positives = 206/583 (35%), Gaps = 37/583 (6%) Query: 175 AVLIYNMLFYYLTRMIVSPHFA---QILWRRDIAPSLGKEKRAFTLSWLAALSVLL---- 227 + + I A I R DI +E L + +++ Sbjct: 153 GKRLEQRISDGRWIQIEERMTADGGIIGLRIDITELKQREASFRLLFDANPVPMIVCALD 212 Query: 228 --LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 ++ GY F I R + + T + + Sbjct: 213 SERIIDVNDAAVKHYGYSPADFRSLTIGDLQAFEADRPWTGDHSNDECTARTWKH----V 268 Query: 283 QGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + T LA L LL ++ + R D LT LPN +L Sbjct: 269 RADGTLIDLAVYSRQLTYAGQPAALLALM-DITERKRAEMRLAFMTQHDSLTGLPNRNSL 327 Query: 341 EQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + +Q + L IDN + ++ G + +RSI R L ++E + Sbjct: 328 RKKLDQMLVSSRRSTEKIALHFLGIDNFKAVNDSLGHAVGDKLLRSISRRLRSTLREEDV 387 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L E ++ SG + + + L L + + + Sbjct: 388 IGRLNSDEFAILQSGVQNPEDVVLLAKRLLHAIGEPFILEGHSLVVSASMGIAMVPTDGD 447 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L ++ + E + + + + +R A+ L + Q Sbjct: 448 DSEKLFMSADMALSKAKNEARG-SYSFFEPGMDARAQTRRKIEFELRQAIQHDVLRPHYQ 506 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P+ + G + ++ + G+++P +F+P+ + L QVL A Sbjct: 507 PLIGLNSGRITGCEALVRWPHPERGLVSPAEFIPVAEETGLINPLGTQVLRRACLDAAAW 566 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 P R ++NL PL N+ ++ K+ +SP+ + LEITE + + Sbjct: 567 PD---DVRIAINLSPLQFRVGNLLSVVMDALKQSGLSPKRLELEITETLLLEKSSQVIAT 623 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L G RI++DDFGTGY++ L+ D IKID FV+ + N IVRSI L Sbjct: 624 LHALRALGARISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRGVCDNRELQAIVRSIISL 683 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +++ AE VET+ + L G QG+L +P A+ Sbjct: 684 GMGLGVTITAEGVETEAELNWLRAEGCHEAQGFLFSPARPDAE 726 >UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EJ7_DECAR Length = 695 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 108/568 (19%), Positives = 202/568 (35%), Gaps = 29/568 (5%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS--------WLAALSVLLLLLCTPYEN 236 I ++++ R I G+ LS A L Sbjct: 125 GFRAAISGLVTSELIHRNTIDAFEGQLVEVDVLSSYIPILGKEHAVEGAFELYQNVTPFV 184 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 + L V + + FL + A L + E +A Sbjct: 185 TQLNRNLWWVTAAVVLVFAALYLMQFLVVRRAQGILEDQEGRIKAAR-DTLEIQVAARTE 243 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 L + L + + A DPLT L N R + Sbjct: 244 ELKRTNSQLEG---EISERRQAQSKLNYLAYHDPLTGLANRRCFIERLEESLSEGERHGE 300 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G + + S+ L ++ + L +L G E + ++ Sbjct: 301 KLAVLYIDLDQFKQVNDSLGHGVGDELLVSVAARLSEHVRLIDMLARLGGDEFICLMEAA 360 Query: 409 ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 +E ++ + + + + L + + ++ L+ ++ Sbjct: 361 RSEDEVELLAREIIAAFEYPFKLGDHELFLTASVGISLCPSDGNSVLDLMRNADTAMYRA 420 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 ++ + +++ + N +R ALD G+L ++ QP + + G + + Sbjct: 421 KMLGRG-NFHFYTAEMTREAQERIQMENLLRRALDNGELSVHLQPQVDSRSGQLVGAEAL 479 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMP 581 + + G + P +F+PL L VL + SVNL Sbjct: 480 VRWNSPELGQVMPIRFIPLAEDSGLIIGLGNWVLRETCRQFMQWRMSGFELPQVSVNLSV 539 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + + ++ + P + LE+TE + + +E+L G +A+DD Sbjct: 540 KQLERPEFIDVLDKILDETGMDPTLLKLELTESVVMA-VGDAFTPLERLRDLGISLALDD 598 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK L +KID FV+ I N+ D I+R+I +LA++ VVAE VET Sbjct: 599 FGTGYSSLSYLKMLPVQQLKIDRSFVEGIGRNSGDEAIIRTIMELARSLGFEVVAEGVET 658 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L LG + LQG+L G+ + Sbjct: 659 VEQANFLADLGCEQLQGFLHGQAVSPVE 686 >UniRef50_B9R6G6 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R6G6_9RHOB Length = 1020 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 108/616 (17%), Positives = 205/616 (33%), Gaps = 30/616 (4%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + + I F L + L Y + + I A Sbjct: 387 RAMTEAAFTALLVGDGIDGFENRYVCACGAAKYLRWSARSDVDRQLIYAVAQNITEQKKA 446 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTL 253 + + ++ ++ I GY Sbjct: 447 ENALKLAANVFTHSDEGIIITDIN------GAIVDINEAFTDITGYERDEILGNNPSILS 500 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVR 310 + + + + + ++ ++ + S + + Sbjct: 501 SGKHDADFYQTMWSKLRKDGVWQGEIWNKRKDGDVFAERLTISAIEDESGNTTNYIGLFV 560 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEF 362 + + R+ A D LT LPN L A + + +D + Sbjct: 561 DITKMKAHERQLEHLARYDRLTGLPNRVLLADNMQQAMARARRHGHTLAIAFIDLDGFKA 620 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ YG + S+ L +++ + L ++ G E + +++ E +N + Sbjct: 621 VNDTYGHAAGDELLVSVAHRLTKVLRTEDTLARIGGDEFVAIITDLPDEKSCVSTLNRIL 680 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 S++ + + +E L Q ++ + Sbjct: 681 DAASKEFKLGAATASVSASIGVTFYPQTEEIDGDQLERQADQAMYEAKISGRNQ-YKFFD 739 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + T+ + + AL L+ QP KE GY+ ++ + G++ P Sbjct: 740 PEQDRRLTEYYAQVADAKKALKTDAFRLHYQPKIRLATKEVIGYEALIRWQHPEKGLLMP 799 Query: 536 DKFLPLIAQF-NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 FLP I + +++ VL++ L+ + SVN+ L L + + Sbjct: 800 GAFLPPIERHPDVAIELGNWVLDNALEQIERWNEVGLDTTVSVNVSALQLTSSDFEETLN 859 Query: 595 RLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + +++ P + +EI E A S+ E I R A+DDFGTGY++ LK Sbjct: 860 KHLQKHPAAEPCQLEIEILETDALSDIERVSKIIRNCRLSSVRFALDDFGTGYSSLAYLK 919 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 +L D +KID FV D + N D +++ I L + ++ V+AE VET LLH G Sbjct: 920 QLPIDTLKIDQGFVHDSLNNAQDQELLKLIISLGRVYNIDVLAEGVETPAHAELLHTYGC 979 Query: 714 QYLQGYLIGRPQPLAD 729 +Y QGY RP P D Sbjct: 980 RYAQGYAFARPMPADD 995 >UniRef50_D1U5D9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5D9_9DELT Length = 711 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 97/570 (17%), Positives = 205/570 (35%), Gaps = 35/570 (6%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLS-----WLAALSVLLLLLCTPYENDFIAGYLVP 245 L E+R ++ W + + + + I GY Sbjct: 137 RRLEKVVAELEASREALLNSEQRYRMVADYNYDWESWIGPDGKAIYISPSCERITGYPPD 196 Query: 246 VFFIIFTLGVGKLRYPFLNLTW----AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 F L + +++ S+ + ++ I + Sbjct: 197 RFIEDPDLMQRIVHRDDIHIWHNYMADTSSGDDDGLDYRIHHRNARTKWVSLIKHAVADE 256 Query: 302 SV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + + VR + + ++ +L DPLT LPN L + Sbjct: 257 AGNPLGVRVSVRDVTHRKRMEQQLKHSSLHDPLTGLPNRALLLDRLSQAVERSARTDDYF 316 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE- 409 + +D + ++ H+G +M + I L +++ + + + G + ++++ Sbjct: 317 GVLFINLDRFQAVNDHFGHVMGDRLLVEIGVRLSRVVRPVDSVARFGGDDFVVLIEEMPR 376 Query: 410 --TEGRLQHMVNILNSRQIHWNNTGLDMGYGAA--WGRFDGNQETLQPLLGQLSWLAEQS 465 + ++ N T + R + + L+ ++ Sbjct: 377 KIDMRDMVRIIRDSFKEPFEVNGTDFPITASMGLEIARA---ESDPESLVHNAQLAMYKA 433 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 + + + + N ++ AL + + QPI + + G++ + Sbjct: 434 KESGKDR-YLVYDARMREGVVNVLAVENDLKRALRAHEFEAHFQPIVNLSDGQLYGFEAL 492 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNL 579 G+++P +F+P+ + L +LE L+ +VN+ Sbjct: 493 ARWNHPQRGLVSPGEFIPVAEETGLIVELGAHILEYACTTLSQWRSRYPGAGNLVMAVNI 552 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + + + + R + P + LEITE +A S + L G ++++ Sbjct: 553 SAKQFGEAKLVTSVKDILARSGLPPGLLKLEITETVVMLDAMESSVRLNLLKSLGVKLSV 612 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L++ D +KID FV+ + + I+R+I ++A + L VVAE + Sbjct: 613 DDFGTGYSSMSYLQKFPVDQLKIDLSFVRLMEKGPENIEIIRAIVNMAHSLRLRVVAEGI 672 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET++Q+ LL+ L Y QGYL +P P + Sbjct: 673 ETERQRDLLYSLQCDYGQGYLYSKPLPRDE 702 >UniRef50_C7RB28 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB28_KANKD Length = 861 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 103/568 (18%), Positives = 193/568 (33%), Gaps = 42/568 (7%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + RR A K + + L + E Y F + Sbjct: 290 RKQIRRKTADLADKTDQIKQIINLVPHMIYAT--NANGELILANRYAADFFGLHLKELDN 347 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGV--------------ETEYSLAFILAVLISFS 302 A + L L+ L + Sbjct: 348 INIEQLR--LKAPTASDLFEDEDYLLRKDAVAVEKQLKLNDSNGKATYLTISKVPFVGRY 405 Query: 303 VC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKS 351 ++ + ++ ++ A D LT LPN L + Sbjct: 406 SRLPAVVTVGVDVTETKQFEQQIQHMAQHDSLTGLPNRLLLNDRINQSLALSLRHHHNGA 465 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G M + + + L ++ + + +L G E ++ LS Sbjct: 466 LLFIDLDFFKNINDSLGHMTGDKLLIEVAKRLEDNVRSGDTVARLGGDEFIIQLSELSDV 525 Query: 412 G-----RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + L ++ N L + + + ++ + ++ + Sbjct: 526 EAEAELDAITVAKKLIQTLTQEFQINGQSLHITASIGVLVYPRDADSHELIMQRADTAMY 585 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + A + + ++ L + + A+ + L QP + + + Sbjct: 586 HAKAKGRN-GYAVFKSDMEAVIMRRQTLESDLHRAIYNHEFFLLYQPQIDANTGKLLCVE 644 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNL 579 ++ GI++P +F+P+ + VLE + + + P SVNL Sbjct: 645 ALIRWNHPVEGIISPLEFIPIAEDNGTIVQIGNWVLEKACQQIKLWIKEYGYSPAVSVNL 704 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + L Q ++ I L ++ I + + LE+TE + S+ ++ L K G RI+I Sbjct: 705 SAIQLSQGDLVSTISSLLEQEKIPAELLELEVTETLILHEEKRSIDLLKSLKKLGIRISI 764 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK+L D +KID FV DI + I+++I ++K L V AE V Sbjct: 765 DDFGTGYSSLNHLKKLPLDKLKIDRTFVSDIPGDPDSETIIKTIIKMSKELGLEVTAEGV 824 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ETQ+Q L QGY RP Sbjct: 825 ETQEQLEFLKGERCPQFQGYYFDRPISP 852 >UniRef50_C4ZNG3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNG3_THASP Length = 905 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 113/686 (16%), Positives = 214/686 (31%), Gaps = 42/686 (6%) Query: 70 GMFCTNLWNFHLSFLQTAVML---GSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 G+ HL +++ +L + V A A L + + L Sbjct: 227 GIRAAAHHGSHLPWVERLALLSPHATARTPVEIAVARGTTYLQNSLQDDPALAPIHDELE 286 Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 GL I I D + + F ++ L T + Sbjct: 287 AAGLRAAIAI-------PLVQDGRMSGCFVLYAGERGFFDEEMTGLITEMAEDVAFALAN 339 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 A+ R + L+ + I GY Sbjct: 340 FEREARRQRAEEAARLLGRAVEASANGIMITDARQPGNPLIH---VNKAFERITGYSAAE 396 Query: 247 FF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 F +G L+ + AV + + + LA + + Sbjct: 397 ALGRNPGFLVGADPLQRGLAEVRAAVKAQREAEVVLRSHRKDGSPFWNELSLAPVRDSAG 456 Query: 304 ---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRID-- 358 + ++ Q DP+T L N L Q + R D Sbjct: 457 TVTHFVGVINDISERIAYEEALERQNNEDPVTGLANRNLLRDRVGQAIAFA----RQDGR 512 Query: 359 ----------NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 N + ++ G ++ I + + + + ++ G E +++L+ Sbjct: 513 ALVLLLLDLDNFKRINDSLGHDAGDQALKEIAGRIRDCVDACDTVARIGGDEFVVLLTDL 572 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + + + + + F + + + LL ++ Sbjct: 573 AGAQAASLVAGRILRAIGQPLIVLGREIKISASIGASVFPDDDDGFEALLRNADAAMYRA 632 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEI 522 A ++ + +++ + +R A+ Q +L+ QP+ + + Sbjct: 633 KDAGRN-AFHFYTADMNAEAVRKLEMEGRLRQAIAQDGFVLHYQPVHEAAGARMVAAEAL 691 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 + +G I P +F+PL + + VL + + + + +VNL Sbjct: 692 VRMRDENGTITPPGEFIPLAEETGMILALGRWVLLAACREARRWLDLGREMQVAVNLSAR 751 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + +A I + + + LEITE + + + L +++DDF Sbjct: 752 QFNDEGLAAHIRHCLAAAGLPARLLKLEITESMVMRDVGQAARVLSTLKALDVSVSVDDF 811 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTG+++ L+R D +KID FV+D + A IVR I LA + L VAE VET Sbjct: 812 GTGHSSLACLRRFPLDQLKIDRSFVQDAAQDEDSAAIVRGIIALAGSLRLQTVAEGVETA 871 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q L G LQGY RP Sbjct: 872 EQVGFLRSAGCDLLQGYYFSRPLEAD 897 >UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VE11_DESVV Length = 997 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 105/570 (18%), Positives = 204/570 (35%), Gaps = 34/570 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIA 240 L R R E+R + A + + LL + Sbjct: 404 LRRANAQLLLENAERRSVEQALRRAEQRYRGIFENAVEGIFQIAPDGMLLRGNPAMAEMF 463 Query: 241 GYL----VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 GY + + + + T + + + E L Sbjct: 464 GYSDIESLREVGSMAEAMFAEATSSDVFFHQLEMTGNVSGFEFRARHREDRELWLRVNAR 523 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------- 344 + ++ + S ++ QA DPLT LPN Sbjct: 524 RVADAHDATLFYEGFLTDITISHRSRQQLAHQAYHDPLTGLPNRLLFLDHLQLAMQRAAR 583 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 +A + L +D + ++ G + +R + TL +++ + + + G E ++ Sbjct: 584 RADAMFTVLYLDLDRFKIINDSLGHGIGDALLREVACTLRRCVRDVDTVARFGGDEFAIL 643 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L + + ++ ++ + + T + +L Sbjct: 644 LEDTGNCAGAVRIARRIRESLAQPVNIAGHEVFTTASIGIVLQTRDYLTPEDILRDADTA 703 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEG 518 ++ + T + + L +R A+++G+L L PI + E G Sbjct: 704 MYRAKEMGKSR-FKVFNARMREDTLRLMALETDLRFAVERGELSLRYHPIVDLEDGSLHG 762 Query: 519 YDEILARLKYDGGI--MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RF 575 ++ +L G ++P +F+P+ L A V+E + + +A Sbjct: 763 FESLLRWR---RGNEDVSPAEFIPVAEDAGLIADIGAFVIEDVCRQVAAWQDTACDCGIV 819 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 VN+ L++ A + + +R+ I+ + E+TE + ++ + QL + G Sbjct: 820 HVNISGRQLMRPGFAQMVDEILRRHGIAGSCLRFEVTESVLVRHGTLAVSVMHQLRELGI 879 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 R+ +DDFGTGY++ L+RL + +KID FV + + +VR I L L VV Sbjct: 880 RLCLDDFGTGYSSLGYLRRLPVESLKIDRSFVWGMEKDEAGRALVRGILTLGLHLGLEVV 939 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 AE VET++Q LL +G +Y QG+L +P Sbjct: 940 AEGVETEEQAVLLRDMGCRYGQGFLYAKPL 969 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 13/223 (5%), Positives = 49/223 (21%), Gaps = 17/223 (7%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 + L + + + V++ S Sbjct: 167 VVRSQQILALVFFCVAAFASWFFLQSISRPLAALTDYARKVAAHEFPAP--VEVKSRDEI 224 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LL 230 + ++ + + + +R + +L++ +L Sbjct: 225 GTLARVMGFMAADLARFVGGLEAEVKRSTGELRTALGELSAIVGGMGEGLLVVSAEGLVL 284 Query: 231 CTPYENDFIAGY-------LVPVFFIIFTLGVGKLRYPFLNLTWAVSTL--CLLNYNQNF 281 + + + + LR + +++ + F Sbjct: 285 RSNEAFASLFCLEPFGCPVALDALLPLSGQDDSGLRGVLEDALQSMARGEAARHSGEYPF 344 Query: 282 LQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWH 323 + G + + + I C++ +V+ + Sbjct: 345 ICGDGVRRWVGCTIEPVTIGGKPCIVCLVQDVTARNEAQQALR 387 >UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Proteobacteria RepID=Q21RL1_RHOFD Length = 853 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 117/676 (17%), Positives = 221/676 (32%), Gaps = 40/676 (5%) Query: 91 GSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI----KCSMYLVGSF 146 + A + R LF + + + Sbjct: 177 AFKLTAAHQVDAAATNRFFGDRRAASYQLDATPILFQPAQLFYATAKGRNADLLVAIDRH 236 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI-- 204 + + ++ L + ++ + +L R+ Sbjct: 237 LGQWQSQADSEYFTVLKRWIEAPPQFSVPAYLWWSLGALALLLALALAGSALLRRQVADK 296 Query: 205 -APSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFIIFT---LGV 255 E R T+ + + + + + + Sbjct: 297 TRHLRASEDRLATILNSVDAYIYIKDMELRYQYANRKVCELFDRPLAQVVGSTDSEFFDA 356 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET----EYSLAFILAVLISFSVCLLYMVRI 311 + +N + + ++ + S+ L L + Sbjct: 357 TTVERLRINDKRVIDNGERVEADEVSRSLDGSREQTYLSIKLPLRQPDGSIYALCGISTD 416 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + H A DPLTLLPN R L + Q+ + + +DN + + Sbjct: 417 ITEHKRSEDAIHQLAFYDPLTLLPNRRFLMERLQQTLKANERQQQCGALLFIDVDNFKDL 476 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ-----HMV 418 + G M +R + L + + L + E +L+L + H+ Sbjct: 477 NDTLGHAMGDELLRQMAVRLSTCTRAEDTLARQGSDEFVLLLCDLSPDLDAALEQTRHVA 536 Query: 419 NILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + F + L Q ++ A AL Sbjct: 537 QKILQHIAEPYLLETRHYQSTVSIGIAMFGDTPTSRDELFKQADLAMYRAKAEGRN-ALC 595 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIM 533 + Q T + + + AL + + +LY QP + + G + ++ G++ Sbjct: 596 FFNPAMQAQVTARTAIEADLHQALARSEFVLYYQPQVNIDGQQFGVEALVRWQHPQRGLV 655 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAG 591 P +F+P+ L +L + + L ++ +VN+ Q + Sbjct: 656 PPLEFIPIAESTGLILPLGRWILSTACRQLVAWAASPEQAHWSIAVNVSARQFRQSDFVQ 715 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + ++ + +PQ + LE+TE + E + + L G R ++DDFGTGY++ Sbjct: 716 TVEQVLRDTGANPQRLELELTESLLVDDVEVVIARMSALKALGVRFSLDDFGTGYSSLSM 775 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL D +KID FV+D+ + DA IV++I L A +L V+AE VET +Q+ L L Sbjct: 776 LKRLPLDQLKIDRSFVRDLRHDPQDANIVKAIVTLGFAMNLQVIAEGVETAEQRDALVNL 835 Query: 712 GVQYLQGYLIGRPQPL 727 G + QGYL GRP P Sbjct: 836 GCTHFQGYLFGRPAPA 851 >UniRef50_Q2S7Q5 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7Q5_HAHCH Length = 832 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 99/552 (17%), Positives = 185/552 (33%), Gaps = 56/552 (10%) Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 W + ++ +IF++ G+L P +T L + Sbjct: 278 VWPMSELKENAFYLANQAAWLTLVLILVTSALIFSVVHGQLIKPISRVTQLAHLLGESHA 337 Query: 278 NQ----------NFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + + + S L + A Sbjct: 338 ETPPEAARDFQSTLRRRD----EIGELARAFKSMDGNLRATAS----------KLTFIAY 383 Query: 328 TDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT L N +A + ID + ++ G ++ I Sbjct: 384 HDSLTGLANRHTFGAFLHRAIAEAARHHFRLGLLYIDIDGFKDVNDSLGHEAGDLVLKEI 443 Query: 380 CRTLLPLMQENEKLY---------------QLPGSELLLVLSGPETEGRLQHMVNILNSR 424 + L +++ + + ++ G E +V++ + + H+V L Sbjct: 444 SQRLHNVLRAEDMVADMSAQYEAMEATKMSRIGGDEFAIVVNHLHSPMDISHIVKRLLDA 503 Query: 425 ---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + +G + + + LL S + + + Sbjct: 504 MQAPFQIESHSFLLGASVGIAVYPEDGKDAHELLKCADIAMYHSKRQGRN-GFEYFDTKM 562 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + ++ +++ IR+AL +G LY QP + G + +L + G ++P +F Sbjct: 563 NHMAVERHQIISDIRSALQKGQFELYYQPQVSALAGNVMGCEALLRWRHPERGFVSPVEF 622 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK-NIAGRIIRL 596 +P+ + VLE + R SVN+ + +I Sbjct: 623 IPIAEETGQIIEIGRWVLEEACRQCREWQAQGLDEIRMSVNISAVQFSSSTDIVAVTREA 682 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P + LEITE + + + + L G I++DDFGTGY++ L+ L Sbjct: 683 LAHSGLPPDCLDLEITETAMMQSDKVGVDKLNALKNLGVSISMDDFGTGYSSLASLRDLP 742 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV I ++ I+++I LAK S+ VVAE VE + Q L + Sbjct: 743 IDQLKIDKSFVDKINHDSQGRAIIKAILALAKELSIEVVAEGVEERTQLDFLSLHRCDLI 802 Query: 717 QGYLIGRPQPLA 728 QGY + +P P Sbjct: 803 QGYYVAKPLPAD 814 >UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Clostridiaceae RepID=A8MM18_ALKOO Length = 703 Score = 625 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 117/656 (17%), Positives = 220/656 (33%), Gaps = 40/656 (6%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVV---DL 169 + Y + W+ L I K + G IF + + Sbjct: 37 ALKIAGLYFLIGVLWILLSDRILGILITDTDMIKEFQLYKGWVYVGITGLIFYRIIKRRI 96 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD-------IAPSLGKEKRAFTLSWLAA 222 A+ + L + + + +R + A Sbjct: 97 SLYSEAIHRAFKSYEELNALHEELIATDEEMLQQYDEIGKHRDALMVSNQRYSLVVEGAN 156 Query: 223 LSVLLLLLCTPYENDFI-----AGYLVPVFFIIF-----TLGVGKLRYPFLNLTWAVSTL 272 + L + GY F L+ + + Sbjct: 157 DGLWDWDLINETYFFSLKHKGVFGYAPEELENTFEAWKSLFHPEDLKEALEKVAAYLENP 216 Query: 273 CLLNYN--QNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 Y + + ++ + + L + H A Sbjct: 217 KEGIYENIYRIRCKNGEYRWILSRGKAVWEDGKAIRIAGSHTDITEQQNLQNKLHTMAYY 276 Query: 329 DPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT L N L++ E ++ + L IDN + ++ G + I I Sbjct: 277 DTLTGLYNKEMLKEEMEKLLREAETEKKKMALIYLDIDNFKHINDILGHEIGDKMITYIA 336 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 L ++ + +L G E +VL +T + + R + N + Sbjct: 337 NILSHQVKAPNLVARLGGDEFAVVLGEIKTIEDVLQEIEKFSSYLRRPWNLNKQEFFIST 396 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + +TL L+ + + ++ +T + + + +R Sbjct: 397 SIGVALYPDHGKTLATLMQNADTAMFHIKENGRD-GVGIYAPYMTEKTLDYIQMSSQLRY 455 Query: 498 ALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 + + +Y QP + + G + ++ L G + P+ F+P + Sbjct: 456 GIHNEEFTVYYQPQIDLKTNEVIGTEALIRWLHPKKGFIPPNDFIPFAETTGYITEIEKW 515 Query: 555 VLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 V +++++ + + SVNL L + I ++ Y+IS + +E+TE Sbjct: 516 VFKTVVEQKVKWQKEGYDNFKVSVNLSSKMLTHPQLLAYIKKILDEYNISGDYIEMEVTE 575 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N E + ++QL + IA+DDFGTGY++ L++L DI+KID F+K+I Sbjct: 576 TAIIDNLEKATDVLKQLKELNITIALDDFGTGYSSLTYLQKLPIDILKIDRDFIKNIQDI 635 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A I++ + DLA + L VVAE VET+ Q L K +QGY +P P AD Sbjct: 636 NDEAHILKLVIDLAHSLGLKVVAEGVETEAQLDYLRKNHCDIVQGYYFSKPLPEAD 691 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 117/639 (18%), Positives = 221/639 (34%), Gaps = 37/639 (5%) Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 RW + + + + I+ + + + Sbjct: 572 WRWVLARGAARRGPGGRLNRVAGALADITDHKQGDAIAGILFHIANAINETRDLDELFLS 631 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS-VLLL 228 + + F+ + + + + + V+ Sbjct: 632 IHTALRRHVQAPNFFIALINEPEDRLDFAYFADERDARYNPVEHISDPAVQSPTLEVIRT 691 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 +D I V L P + + + + +Y Sbjct: 692 GRQVHLHSDDIEARPVFGSRP-----AAWLGTPLRSRGKVIGAMVVQHYE------DSEF 740 Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA 348 +S ++ + + + AL DPLT LPN L E+ Sbjct: 741 FSARDAELMVPVAEQVAVAI-----ERKQGEEMLTHLALHDPLTGLPNRALLLDRIERAI 795 Query: 349 ---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D +F++ +G + + + R + P+++ + + +L G Sbjct: 796 QRRRRNDSYRFAVLMLDLDRFKFINDSHGHTTGDNLLVEVARRMRPVVRAGDTVARLGGD 855 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L+L ++ R+ + L + R + + +T LL Sbjct: 856 EFALLLEDVDSPRRIVQITRRLLAALERPVRMGAKVVRTSASIGMVLRTQGYDTADALLR 915 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNK 514 Q+ A + + T + + L + A+ + L L QP+ + Sbjct: 916 DADIAMYQAKAQGKGR-FRVFNQSMHRHTMEMMTLEGDLSMAMRRKQLYLEYQPVLAVDG 974 Query: 515 -EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-- 571 G++ ++ G + P +F+P+ + L R VLE LA Sbjct: 975 ARLLGFEALVRWRHPTEGAVPPARFIPMAEETGLILRIGQWVLEQAAATLARWRATLPGA 1034 Query: 572 -GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVNL Q N+ GR+ R+ + P+A+ LEITE + + ++ +E L Sbjct: 1035 HDLYVSVNLSARQASQPNLTGRVARILSDTGLPPEALKLEITETAIMKDPDGALQRLEAL 1094 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G I IDDFGTGY++ L+R D +K+D FV + + + IVR++ L ++ Sbjct: 1095 RRLGVGIGIDDFGTGYSSLAYLQRFPVDTLKVDRSFVSAVAGDAENREIVRTVVTLGRSL 1154 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VET +Q A++ +LG +QGY RP + Sbjct: 1155 GLHVVAEGVETAEQFAIVAELGCHSVQGYHFSRPV-AEE 1192 Score = 68.8 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 22/262 (8%), Positives = 47/262 (17%), Gaps = 26/262 (9%) Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM- 140 ++ + ++ VL A R R +T + L + Sbjct: 343 AWRRLRDIIDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLGRGNFAYALPFYGERI 402 Query: 141 -----YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH- 194 + P + F D + + +LF + R Sbjct: 403 PLLGDWFFSPDMPQPSHYTRFSEHGDKLAAEAYVPTLFGGRGAHVWTVASALRDGEGRLN 462 Query: 195 ------FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYL 243 + +R + L T I G Sbjct: 463 GVIQTIRDITERHNQMRELEKSRQRYDMAISATNDGIWEWELDTNTLYHSPRCLEILGRA 522 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTL-----CLLNYNQNFLQGVETEYSLAFILAVL 298 + L + V + + T + A Sbjct: 523 PDATLSPMAIAAILHPEDRLRVLTEVRRITGEDAERFEHEFRIRHTDGTWRWVLARGAAR 582 Query: 299 I---SFSVCLLYMVRIYHRSEW 317 + + + Sbjct: 583 RGPGGRLNRVAGALADITDHKQ 604 Score = 44.6 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 22/245 (8%), Positives = 45/245 (18%), Gaps = 28/245 (11%) Query: 107 QLGTRWRYGLTSRYVWQRL-FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFT 165 R+ L + R+ L + P + + A T Sbjct: 238 ADRQRFVGALQATGRVDRMELRLKRRDGSLFWGLVSARLVRGPAPAQAAQTGQIAKTGQT 297 Query: 166 VVDLLSLFTAVLIYNMLFY-YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 ++ T I + +R + + Sbjct: 298 AGTGVTNGTYRADAKAGNAPAEVDYIDGFVLDITEQKAMQDQLSEAWRRLRDIIDFLPDA 357 Query: 225 VLLLL-----LCTPYENDFIAGYLVPVFFII--------------------FTLGVGKLR 259 VL+L + + + G+ F Sbjct: 358 VLVLDASRRVIAWNRAMEEMTGHSASEMLGRGNFAYALPFYGERIPLLGDWFFSPDMPQP 417 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYS-LAFILAVLISFSVCLLYMVRIYHRSEWL 318 + + L Y G +A L ++ +R Sbjct: 418 SHYTRFSEHGDKLAAEAYVPTLFGGRGAHVWTVASALRDGEGRLNGVIQTIRDITERHNQ 477 Query: 319 NRRWH 323 R Sbjct: 478 MRELE 482 >UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5H0_9RHIZ Length = 684 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 113/656 (17%), Positives = 223/656 (33%), Gaps = 36/656 (5%) Query: 101 CAILRWQLGTRWRYGLTSRYV--WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 CAI + WR + +R + F G+ I + ++ + P+ Sbjct: 23 CAIGSFATTRLWRNAVAARQRDRFHWCFLTGVTGGSSIWATHFIAMLGYQTPVP-----A 77 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 D TV+ ++ + L R+I L A Sbjct: 78 TFDPKLTVISIVIAILGTSLGIALTTSSNRLIARLVGGATLGLSIAAMHFVGMFAYRVDG 137 Query: 219 WLAALSVLLLL-------LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST 271 ++ ++L G + + L A+ Sbjct: 138 IVSWDQTYIVLSIVASIGFSVLATFYMTGGRAPAFLSRTNAAVISLILAIVLLHFTAMDA 197 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE---WLNRRWHLQALT 328 + +S + L++ + + A Sbjct: 198 FSVAPIAGLSSGADSGAFSAMAMSVALVALLIVFTGFSSEVIEFRNKTRSEIDLNYIATH 257 Query: 329 DPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT +PN R + + A S + +D + ++ G ++ + Sbjct: 258 DELTGVPNRRKFSEILADRCAKTRDTGAEFSLIMIDLDRFKPVNDTLGHTTGDAVLKRVA 317 Query: 381 RTLLPLMQENEKLYQLPGSELLLV-LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMG 436 L +++ ++ L +L G E ++ L + + + + SR N +++G Sbjct: 318 NRLEHVIRASDFLARLGGDEFAIIALGSTGDRSNVLRLCDRIIDVLSRPFIINGHVIELG 377 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + T L + E ++ + + L +R Sbjct: 378 ASLGVAIAPAHGTTADDLTQSADIALYAAKDAGR-STYKLFETAMADEVQLRRSLEIDLR 436 Query: 497 TALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL++ + +Y QP + + G + ++ G+++P F+PL + L Sbjct: 437 RALNREEFEVYYQPQVDAKSGDYSGAEALIRWRHPQRGMLSPVVFIPLAEELGLIGPIGN 496 Query: 554 QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + T P +VNL P ++ + + + + + P + LEITE Sbjct: 497 WVLRQACRDAVTWPS---HLSVAVNLSPAQMMDRRLPKSVKSILNETGLDPARLELEITE 553 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N ++ + +L G I++DDFGTGY++ L R + IKID F+ I T+ Sbjct: 554 TSLIGNDVQALAVLNELRAMGIAISLDDFGTGYSSLSYLHRFPINRIKIDRSFIDRIPTD 613 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A IV++I L + + + AE +E ++Q + G +LQGYL +P P ++ Sbjct: 614 VDSAAIVQAIAKLGGSLGMKITAEGIENEEQWSFSKTEGCDHLQGYLFSKPIPGSE 669 Score = 71.9 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 48/184 (26%), Gaps = 4/184 (2%) Query: 4 EHNLIKNIKIFTLAFTLTVVLI-QLSRFISPLAIIHSSYIFLAWMPLCVML-SILFIFGW 61 + I+ F + + P + S I + L + L + Sbjct: 51 LTGVTGGSSIWATHFIAMLGYQTPVPATFDPKLTVISIVIAILGTSLGIALTTSSNRLIA 110 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQT--AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSR 119 R V G+ + + + V V+ +I L T + G + Sbjct: 111 RLVGGATLGLSIAAMHFVGMFAYRVDGIVSWDQTYIVLSIVASIGFSVLATFYMTGGRAP 170 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 R + + I + F G F+ + + A+LI Sbjct: 171 AFLSRTNAAVISLILAIVLLHFTAMDAFSVAPIAGLSSGADSGAFSAMAMSVALVALLIV 230 Query: 180 NMLF 183 F Sbjct: 231 FTGF 234 Score = 44.6 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 9/124 (7%), Positives = 24/124 (19%), Gaps = 2/124 (1%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAI-IHSSYIFLAWMPLCVMLSILFIFGW 61 + + I + F + +S I S + + + Sbjct: 112 LVGGATLGLSIAAMHFVGMFAYR-VDGIVSWDQTYIVLSIVASIGFSVLATFYMTGGRAP 170 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 + + L L F + + + + V Sbjct: 171 AFLSRTNAAVISLILAIVLLHFTAMDAFSVAPIAGLSSGADSGAFSAMAMSVALVALLIV 230 Query: 122 WQRL 125 + Sbjct: 231 FTGF 234 >UniRef50_Q2N9U3 Sensory box/GGDEF family protein n=3 Tax=Sphingomonadales RepID=Q2N9U3_ERYLH Length = 909 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 121/721 (16%), Positives = 233/721 (32%), Gaps = 57/721 (7%) Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 + + ++P++ + + L S+L A + S F + + L + TR + Sbjct: 76 WTFMALLPLVAAVVGSLLTQALPSYLAIAAFVSSALFFGIASKVSLWERSFTREVLSAAA 135 Query: 119 RY------------VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV 166 + L+ L PI + + L + Sbjct: 136 AAVAVTVVPSLLYGLALGLWVLLGDLPIAAGVMGVISFNAISATLLTGRPRPMYACLAAS 195 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 L+L +F + Q R+ A ++R + A + Sbjct: 196 WAPLALMEGNPTNVTMFAVFAAGLAILSRYQAKIDRERAERRQTDER---ILNRAIDILR 252 Query: 227 LLLLCTP------YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 + PV + T + P L Sbjct: 253 DYEETGNGWFWETDRRGLLTYVSGPVANRLGTKAKRLIGRPITELFDLAHDNREGERTIA 312 Query: 281 F------------LQGVE--TEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 F ++ E + + Sbjct: 313 FHLSARSAFQELPVKAAGIEEERWWSISGRPIFDSFQNFCGFRGSGTDLTEKRRSQEHAS 372 Query: 324 LQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 A D LT L N + Q+ E+ + L +D + ++ G Sbjct: 373 RLAHFDSLTGLANRHQMSQSLEKILASPKVANRECAVFLLDLDRFKHVNDTLGHPAGDAL 432 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 ++ + L + ++ +L G E ++L G + +L ++ + S+ Sbjct: 433 LKQVAERLESTVGNMGRVGRLGGDEFKVILPGRVPKDKLSYLAAGIIRSLSQPYSIEGQR 492 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + +G N E+ + ++ + + ++ L Sbjct: 493 VVIGVSIGIAISPENGESSEDVIRNADLALYAAKDGGRGR-FHFYSNDLHSAAEERSQLE 551 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R A+ +G L L+ QP+ + G++ +L G ++P KF+P+ L Sbjct: 552 RDLREAISEGQLELHYQPVVQTATERIAGFEALLRWKHPQHGYISPAKFIPIAEDTGLIQ 611 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 + + LA+ P R +VN+ PL + + I + ++P + L Sbjct: 612 AIGEWAIRTACHDLASWPKS---IRCAVNVSPLQFSNEQLPTIITSALAQAGVAPTRLEL 668 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE ++ E + L G R+A+DDFGTGY++ LK + IKID FV+ Sbjct: 669 EITESVFLNDDEGTDAMFAALSGIGVRLALDDFGTGYSSLGYLKTAPFNKIKIDQSFVRG 728 Query: 670 IVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + I+ SIT LA+ + AE VET + L+ G ++QGY+ +P A Sbjct: 729 ATVPGSRNGAIIASITSLAQELGMDTTAEGVETLDELDLVRMHGCSHIQGYIYEKPLNKA 788 Query: 729 D 729 + Sbjct: 789 E 789 >UniRef50_Q3IG16 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IG16_PSEHT Length = 1007 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 99/570 (17%), Positives = 202/570 (35%), Gaps = 30/570 (5%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 F + R I + + ++ Sbjct: 431 HEFVVVLRDITQRKQNEEALHLAALVYGNSSEGMAITDEN------GIIFDVNPAFSKTT 484 Query: 241 GYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + I + + L +++ + Y + Sbjct: 485 LFSKEEVINKTISVLSSGKHDKTFYQALWAELTSTGRWQGEIINRRKNGELYVEWLTIDT 544 Query: 298 LISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------Q 346 + + V + + + + QA D LT LPN L++ Sbjct: 545 VYDDNNIPVRRIAIFTDLTEKKQADALIWKQAHFDHLTDLPNRLELKKRLNECFMRVENN 604 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 L ID+ + ++ G ++ + + +L + E + ++ G E ++V S Sbjct: 605 AEQLVIMLLDIDHFKDVNDTLGHHYGDALLKFVSQRILESAKNAEFVARIGGDEFVIVFS 664 Query: 407 GPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + E ++ + + S I+ N L + + E + LL Sbjct: 665 KIK-EQHIKQIAENILLSLSSAIYIENEELFISASIGIASAPNDGENTEQLLKAADQAMY 723 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 ++ + + + + ++LLL +RTA++ L+ QPI + + Sbjct: 724 KAKVNGRN-GFEFFSHDMREKAQMRMLLLKELRTAIELEQFELFYQPIVCLKDLHVHKAE 782 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNL 579 ++ + G+++P F+PL + V L+ L + SVN+ Sbjct: 783 GLIRWRHPEKGLISPADFIPLAEETRQINILGQFVFSQALQTLNDIKAHITNDFQLSVNV 842 Query: 580 MPLTLLQKNI-AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 P+ L + + ++ +++ EITE + + ++ L + G ++A Sbjct: 843 SPIQLSTPDSGIDEWGAMLNAANLPASSIVAEITEGLMVNPEALTQSRLKALVQSGMQLA 902 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L+ + D +KID FV +I + + ++ +I +A L V+AE Sbjct: 903 LDDFGTGYSSLAYLQEMDTDYLKIDKRFVDNINKGSQELVLCETIIVMAHQLGLKVIAEG 962 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +ET+QQ LL + G Y QGYL +P P Sbjct: 963 IETKQQMQLLLEAGCDYGQGYLFSKPLPKE 992 >UniRef50_B2UJT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UJT5_RALPJ Length = 652 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 104/559 (18%), Positives = 186/559 (33%), Gaps = 49/559 (8%) Query: 214 AFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGK----------L 258 ++ +L+ + G + V Sbjct: 72 LLSMVNALTEGILVCGADRCVSYANPSAARLLGLPLDELVGRPLPTVVHAAVDEFETSIH 131 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-------------- 304 + +L LN ++ L + Sbjct: 132 ETDWPDLDVLAEGQPQLNQIFGLHCLDGRTVWVSSNWTPLYTEGGHSTTAAPGAARQGAR 191 Query: 305 ---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 +L + + +R A D LT L N ALE E + S Sbjct: 192 PYSVLVSLVDITQIREAQQRIRHLATHDTLTGLLNRSALEDRLEHALALGRRNRSRVSVM 251 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G +R + L +E + + +L G E +++L + G Sbjct: 252 FLDLDRFKNVNDTLGHQFGDMLLREVAARLQACAREADTVARLGGDEFVVMLESLDAMGT 311 Query: 414 LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + S H L +G + + LL + + Sbjct: 312 -RRVAERILSAIGAPFHIEGQELYLGVSIGIAVAPRDGDDPHTLLRKADAAMYLAKERGR 370 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 + + + +++ + + +R A D+ + QP + G + ++ Sbjct: 371 N-NFQTFTSDLDDRVSRRFRIESGLRRASDRNEFYADYQPRVDVRSGRIVGVEALIRWNS 429 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQ 586 D G M P +F+ + L D +L + LA R S+NL Sbjct: 430 ADFGRMMPGQFIQDAEETGLIVEIDRWILRAACDQLARWRRIGLPHLRMSINLSGQAFSS 489 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ + R + AV LE+TE + S + +L G +A+DDFGTGY Sbjct: 490 GKLSDMVRRALSASGLPGDAVELEMTEGILIRDDPSLHALLTELRAMGVSLALDDFGTGY 549 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L R D +KID FV+D+ A I R+I +A+A + VAE VE+ Q Sbjct: 550 SSLSYLHRFPIDTLKIDRSFVQDLPHVAERAAITRAIIMMAQAMGMRTVAEGVESTGQLD 609 Query: 707 LLHKLGVQYLQGYLIGRPQ 725 L ++G QGYL+ RP Sbjct: 610 FLREVGCDEFQGYLLTRPL 628 >UniRef50_A4C531 Sensory box protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C531_9GAMM Length = 725 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 82/566 (14%), Positives = 186/566 (32%), Gaps = 33/566 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFF 248 ++R + + + + + G+ +F Sbjct: 146 VEDVTELCLSQQQLKDNQQRYELALKSSGAGIWDWDILNDVVHYSAKFSDLLGFDNLLFG 205 Query: 249 IIFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAVLISF- 301 ++ ++ L++ N + + + L Sbjct: 206 TSWSSWTDQIHPDDLDIFETQLQNHLDDADKPFNIECRLISQKKKVLWFTVVGEALRDEH 265 Query: 302 --SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 ++ + + QA D LT LPN + + + Sbjct: 266 GYPTRMVGSMVDITLKHQSQQMIWQQANFDHLTGLPNRNMFTERLKQEISESKRYQQKFA 325 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D+ + ++ G + + L +++E++ + ++ G E ++ Sbjct: 326 LFFIDLDHFKEVNDTLGHGAGDQLLIEVAERLQLILRESDTIGRIGGDEFTALIPHINQT 385 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + L + + + + F + E + LL +S + Sbjct: 386 CDIDSLAQKLIQTIELPFYIDGESIFISASIGITLFPDHSEKIDELLKFADQAMYRSKEN 445 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 + Q L + A+ + + QPI +++ + ++ Sbjct: 446 GRKR-FSYFTFAMQEQADHTRNLTQELHLAIIEQHFHVVYQPIMALPSRKITKAEALVRW 504 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL 584 + G+++P F+PL + + V + K + S+N P+ Sbjct: 505 DHPELGLISPADFIPLAERSGVIIEIGNWVFYNAAKQALKWQQEIDPSFEISINRSPVQF 564 Query: 585 L--QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 N + + L K + + + +EITE + + + G I++DDF Sbjct: 565 QNPDPNADQKWVELLKNLGLI-KGICIEITEGLLLDDTQGIKDKLLYFQNNGMDISLDDF 623 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L + + +KID F+ D+ N + + +I +A L V+AE VE+Q Sbjct: 624 GTGYSSLSYLTKFDINFLKIDRAFINDLEHNQNNQALCEAIIVMAHKLGLKVIAEGVESQ 683 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q L + ++QGY I +P A Sbjct: 684 RQLDFLAQAQCDFVQGYFISKPISAA 709 >UniRef50_Q3A6D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6D2_PELCD Length = 976 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 86/432 (19%), Positives = 163/432 (37%), Gaps = 16/432 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFM 363 ++ A D LT L N L++ + + C L +D + + Sbjct: 518 ISEQNKAQKKIAYLAHYDQLTGLANRSLLKERFDYAVRHAMRSGSQVALCLLDLDGFKAI 577 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + + + L ++ + ++ G E +++ + + +V S Sbjct: 578 NDLQGHHVGDQLLCEVAKRLQTSIRSTDMAARIGGDEFVILFTDMQKTSVATTLVQKAMS 637 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + F + L + + + Sbjct: 638 CFTSAYDLQEHTHTITASMGVAIFPEDGHDFPTLFKHADAAMYFAKESGRN-GVQFFRQE 696 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDK 537 + + ++ + +R AL + L L+ QPI G + ++ G++ PD+ Sbjct: 697 IGQRVQNRLTMETELRQALQEDQLELHYQPIWQLTEKCIVGLEALVRWRHPQKGLLPPDR 756 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + NL VL + + + + SVN+ L + + RL Sbjct: 757 FIPIAEESNLIQALGQWVLNAACRDMRSWRNQGFESLPVSVNISARQLFHDDFTSSLARL 816 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 K Y + P+ + LE+TE + + L G + +DDFGTGY++ L R Sbjct: 817 LKEYALPPEQLELEVTETIFLQKDTTVEKVMNHLKNIGVGLVLDDFGTGYSSLSYLNRFH 876 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F+ I DA++ +I +A++ + VVAE VET Q+ L + G Sbjct: 877 IDKLKIDRSFMAHICQKEQDAILTATIIRMAQSLGMQVVAEGVETAGQELFLMEQGCDLA 936 Query: 717 QGYLIGRPQPLA 728 QGY +PQP+ Sbjct: 937 QGYFYYKPQPIE 948 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/339 (10%), Positives = 86/339 (25%), Gaps = 33/339 (9%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCG 70 + L LS + L ++ ++ + LC+ L I + GW G+ G Sbjct: 17 FRRTLLHIVA-----PLSLCLLFLVVLQTTLPLWVTVALCLGLLIQMLAGWHGMEEYRRG 71 Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVL---CACAILRWQLGTRWRYGLTSRYVWQRLFW 127 + ++ A+ + +VL + T V L Sbjct: 72 ERLRADTQRNQLHIENAISAIAVQEIVLDTDGQAVDFIFLSANPAFETHTGLKVADILGR 131 Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 GI+ + Y+ + ++ + ++ A + F + Sbjct: 132 RVTEVLPGIEKTHYI---ESFGKVALTGEVLIFEEYSDLLGRHFRIHAYPLGEKCFATMF 188 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN-------DFIA 240 I H A+ + + R+ + L+ + Sbjct: 189 SDITESHNAKEALQE-NQSLIQSLLRSMQDLVFVLDTDLVFQTYHQPACGKLFVLPEQFI 247 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 G + + ++ L ++T + + ++ + Sbjct: 248 GKHLDEVNL----PEEVVQATKTALEHTLTTGTVTHTEYWLDLPDGRTC-FDMCISPYRA 302 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHL--QA----LTDP 330 + L + R + QA L D Sbjct: 303 QNRQIKGLTCVARDITERKQAEETLEKRIQALTRPLHDA 341 Score = 43.0 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 21/237 (8%), Positives = 49/237 (20%), Gaps = 31/237 (13%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 R L +V P+ + +V ++ V L ++ Sbjct: 18 RRTLLHIVAPLSLCLLFLVVL-------------QTTLPLWVTVALCLGLLIQMLAGWHG 64 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 R + I ++ + +V + L + G Sbjct: 65 MEEYRRGERLRADTQRNQLHIENAISAIAVQEIVLDTDGQAVDFIFLSANPAFETHTGLK 124 Query: 244 VPVFFIIF--TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 V + G + ++ V+ + + + + + + Sbjct: 125 VADILGRRVTEVLPGIEKTHYIESFGKVALTGEVLIFEEYSDLLGRHF----RIHAYPLG 180 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRID 358 C M S N ++ L D Sbjct: 181 EKCFATMFSDITESHNAKEALQE-----------NQSLIQSLLRSMQDL-VFVLDTD 225 >UniRef50_Q312J4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q312J4_DESDG Length = 904 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 129/741 (17%), Positives = 240/741 (32%), Gaps = 46/741 (6%) Query: 26 QLSRFISPLAIIHSSYIFLAWMPL-CVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFL 84 + +P+ + H S + + ++ +F G+ G Sbjct: 157 PDGWWFAPVFVEHKSVVAVQVCTADAAQAPVVAVFDMHGLALRYAGQLGIGDSGSGFVLD 216 Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV-----------WQRLFWLGLVTP 133 + +L V G L SR V R + Sbjct: 217 ERGTVLFHAGSPVAGRNVFDGMHAGFPALEQLDSRMVQEPSGAGGYEYATRRSGGTVRKM 276 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + L TA L + ++ R + Sbjct: 277 VAWNTVELPPHRLVVGLAAAVQDINADMYALNRQQGLLAVTAFLFFALMALGFLREQRTR 336 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 L R + W A L L + I GY F L Sbjct: 337 ----ALRRSAELYRQLADTAYDIELWHDAEGKL---LYVSPSCERITGYPAADFMADAGL 389 Query: 254 G----VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLL 306 + F A L + L ++ + + + Sbjct: 390 LERVVHREDLPAFRMHMSAPGMLEGESLEYRLLHRTGKVRWVSVVAREIWTSDGICQGVR 449 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRI 357 VR S+ + + ++ D LT + N + G + L I Sbjct: 450 SSVRDVTESKLMEKELDYKSQHDELTGVANRSLCLARIRKAMVRTAPRPEVGFAVLFLDI 509 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + + L+ ++ + + + G E ++VL M Sbjct: 510 DRFKIINDSLGHEQGDMVLAEMAERLVASVRPCDTVARFGGDEFVIVLEELPGPREAVRM 569 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAA-WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 ++ + + + + G+ Q + + ++ A Sbjct: 570 ARLIKKRFKEPLLLEGHEMRITCSIGMIFEYGGDSVGAQAAVRNANIAMYRAKAAGRDK- 628 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 L + + L N +R+ L + + + QP++ + G++ ++ + Sbjct: 629 LKVFRPKMLAAAASVMTLENDMRSGLQRDEFFMEYQPVQRSDDGTLTGFEALIRWRHPEK 688 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQK 587 GI+ PD F+PL + L L L +A +VNL Q Sbjct: 689 GIIGPDHFIPLAEESGLIVDIGLSALRKSCCEMARWCRRYPGCEELFLAVNLSARQFSQP 748 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + + + + P+ + LEITE SNAE+++ + +L + G ++AIDDFGTGY+ Sbjct: 749 DLVTCVSGILQDSGLDPRQLKLEITESTIMSNAETALAMMHRLKQIGVQLAIDDFGTGYS 808 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L++L D +K+D +FV + IVRSI LA + L+ VAE VE +Q + Sbjct: 809 SLAYLQKLPVDTLKVDRMFVSAMEEQAGCLEIVRSIIVLANSLQLNTVAEGVENSRQLEM 868 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L LG Y+QG+ +P P+A Sbjct: 869 LRNLGCSYVQGFYFHKPLPVA 889 >UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q6I3_CATAD Length = 750 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 96/587 (16%), Positives = 195/587 (33%), Gaps = 31/587 (5%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-- 230 + + ++R I + + R A L + + Sbjct: 157 LRDFDGMIIGTFGISRDITARTTTEAQLRAKTAELDRIGTELRALIESSPDPMCRFDRQL 216 Query: 231 ---CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL---CLLNYNQNFLQG 284 +AG G + + + + ++ L Sbjct: 217 RYTYANPAALRVAGVPESELVGRTNREAGHQEKFVREWEQTLRRVLRTGVGDEVEHDLVL 276 Query: 285 VETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 T L + ++ ++ + + QA+ DPLT L N L Sbjct: 277 AGTRRFFHTRLVPERDATGTVVSVLTVSHDLTDRKRIEDALAEQAVRDPLTHLANRALLV 336 Query: 342 QAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN-EK 392 +Q + L +D + ++ G + + L +++ + Sbjct: 337 DRIDQALAKMRVQGGRLAVLFLDLDRFKVVNDSLGHAAGDALLVATAARLRSAVRQGSDL 396 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + + G E +++ + + + S + + + Sbjct: 397 VARFGGDEFVILCEHVQGRKDAADVARRVTRALSAPFERDGQPIHISASIGIAVTSDPMT 456 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLA-LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T LL + A +H ++ V + ++ L +R A+++ + L Sbjct: 457 TADELLRDADAAMFRVKARNHGSGSYIFFDDSVREEAVSRLWLEGELRRAIEEKEFRLVY 516 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 +P+ N G + ++ + G++ P F+ + +L VL LA Sbjct: 517 EPVYNLRDRQIIGMEALIRWQHPERGLLPPSTFIEIAEDCDLIVPIGRWVLHEACGQLAV 576 Query: 566 HPCDK----KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + +VNL P L + + + + + P+ + LE+TE + Sbjct: 577 WNRRRDPGKPPLTMAVNLSPRQLNDEGLVAEVANALRGSGLEPEQLTLEVTETAVHEAPQ 636 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + + Q+ G +IA+DDFGTGY++ L+R+ A+ +KID FV + D IV Sbjct: 637 FAQAVLSQVSDLGVQIALDDFGTGYSSLGHLRRIPANALKIDRAFVNGLEHKGGDTAIVT 696 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +A A + V E +E++ Q L LG QGYL P A Sbjct: 697 AVVTMAHALGMITVGEGIESEAQYEYLRALGCDQGQGYLFAEPVSAA 743 >UniRef50_C4XGB8 Putative response regulator receiver protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGB8_DESMR Length = 801 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 118/660 (17%), Positives = 221/660 (33%), Gaps = 27/660 (4%) Query: 93 QTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLK 152 F L + ++ P + + Sbjct: 138 AIFAASPTPLCLVDGHNAIADVNPAATRLFGHCADALRGQPAQDFFAARDAATLLSVIDA 197 Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK 212 + + + +F A + + L V + + Sbjct: 198 AANGEAGHVRLSGLRPEGGVFPAAVAASPLPDAAGVGQVLLEVRPCQIQGARPDVPEIDL 257 Query: 213 RAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 + + L +P L + +L S + Sbjct: 258 GLSAEGFCVIDAEDRLRFLNASAARMFGLPGLPE--PGTPLSDALPQELAASLVRDASRV 315 Query: 273 CLLNYNQ---NFLQGVETEYSLAFILAVL-ISFSVCLLY-MVRIYHRSEWLNRRWHLQAL 327 N + +L L + + S L +V + L + A Sbjct: 316 IAWNEPVKKETTFAIGGQDKTLLVSLFPMGLDESRRLAGGIVTDITDRKQLESQLAHMAF 375 Query: 328 TDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 DPLT LPN Q + L +D + ++ G + + S Sbjct: 376 HDPLTGLPNRSLCLDRIRQALERSKRRDNYQYAVIFLDLDRFKIVNDSLGHHVGDRLLES 435 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDM 435 + R L ++ + + +L G E ++VL + + ++ + S + + + Sbjct: 436 VARRLRDCVRSLDTVARLGGDEFVVVLEETGSYREVVRIIKRIRDAMSEVFPLSGHDVHV 495 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 E + LL + ++ + + + L + + Sbjct: 496 SASMGIVVSPAIYEKPEELLRNANIALHRAKDEGRNR-FKVFNTRMLEDAIRLMDLESDL 554 Query: 496 RTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL +G+ L QPI ++ G++ ++ + GI P +F+P+ L Sbjct: 555 RAALKRGEFYLDYQPILALRDRRVTGFEALVRWRRPGKGIAPPGEFIPVCEDTGLIVPLG 614 Query: 553 LQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 L VL + +A+ SVNL L Q ++ + R+ + + P+A+ L Sbjct: 615 LWVLTEACRTMASWQARFPETAGMSMSVNLSAKQLSQPSLVEDVERILRDTGMDPRALKL 674 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE N E S+ +++L G R+++DDFGTGY++ L+R D +K+D FV D Sbjct: 675 EITETVIMDNPEVSILRLKRLKALGVRLSVDDFGTGYSSLSYLQRFPIDTLKVDRAFVSD 734 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + T+ + IV ++ LA + L VVAE VE + Q +L + QG+L RP D Sbjct: 735 LDTS-ENRKIVGAVVALAHSLGLDVVAEGVELETQSDVLTGFACEAGQGFLFSRPVCKED 793 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 95/439 (21%), Positives = 175/439 (39%), Gaps = 29/439 (6%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 R A D LT LPN R + + + L +DN + ++ G Sbjct: 303 RTKNRLRKMAYYDALTSLPNRRLFTEQLSLLLKLAQRNKQTLALLFLDLDNFKRINDSLG 362 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLY------------QLPGSELLLVLSGPETEGRLQH 416 +R + + L +++++ + +L G E +VL+ + + Sbjct: 363 HSAGDLLLREVGQRLSKCVRDSDVVAHYADPTAKIDVSRLGGDEFTVVLNDLDAPESVGV 422 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + L S + + L + + ++ LL + A Sbjct: 423 VAERLILALSEPMLIDGHELVITPSIGIAIAPEHANEVEGLLRCSDTAMYHAKASGK-ST 481 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 E + ++ L N +R A+D +L+L+ QP + + G + +L + + Sbjct: 482 YLVYESSMEEAGLDRLTLENDLRKAMDNDELVLFYQPQVDTRSGKVVGAEALLRWMHPEQ 541 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNI 589 G++ P KF+PL + L V+ K + T +VN+ L + Sbjct: 542 GLIPPFKFIPLAEEMGLIGEMGDWVIREACKQVQTFAKKGVSLPKVAVNVSALQFT-PSF 600 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R+ + + P + LE+TE + +S+ + +L G ++IDDFGTGY++ Sbjct: 601 TRRVKSILDELAVDPATLELELTEGVVMGDTNASVQALAELKDLGVSLSIDDFGTGYSSL 660 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L R D +KID FV + + A +VR+I +A++ L +VAE VET +Q + Sbjct: 661 SYLSRFPLDELKIDRSFVIEANNSEQGASLVRAIIAMAQSLGLELVAEGVETDEQYEFMT 720 Query: 710 KLGVQYLQGYLIGRPQPLA 728 G +QGY+ +P P Sbjct: 721 TAGAHVIQGYMFSQPVPAE 739 >UniRef50_A4BJS0 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BJS0_9GAMM Length = 857 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 124/643 (19%), Positives = 219/643 (34%), Gaps = 40/643 (6%) Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 W RL + + +YL P+ T +A + Sbjct: 199 WMRLILNVIEVSLLTSVLVYLFNRVVTQPVANLTQQLEAIETSPTEGQRLQLIYAHRDDE 258 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF---TLSWLAALSVLLLLLCTPYENDF 238 + + L + + E+ TL + + L Sbjct: 259 IGSLTDTINHQLQQLDTLIKENELALEEAEQSYQNLNTLVESLPHLINVKTLDGVPLLAN 318 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY-------------NQNFLQGV 285 A L F +L+ A L ++ Sbjct: 319 QAFLKSYRLSPDDYLKPEHYNVIFDSLSPATRQLLEEADQEAVESNQAVLLPEISWRLPD 378 Query: 286 ETEYSLAFI-LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 SL L++ +L + + A D LT LPN Sbjct: 379 GHHLSLEMRKLSIQYKGQPAILSVGVDITERKLHQEHIQHLAYHDALTDLPNRHLFLDRL 438 Query: 345 EQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 +Q + + +DN + ++ G + + + L +E + + +L Sbjct: 439 DQALLRTQRSKQYGALIFVDLDNFKTINDTKGHLAGDAVLADVAERLKHAFREVDTVARL 498 Query: 397 PGSELLLVLSGP-ETEGRLQHMVN----ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 G E ++ ++ TE + + L R L + F + Sbjct: 499 GGDEFVICMTDLGRTEQEAYDIAHDRSVKLMDAMKRPFQTQGDQLIVSASLGLAFFHDHS 558 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T LL ++ + +E ++ + + + L R AL + + L Sbjct: 559 LTASELLSHADMAMYRAKETGKNRII-LFQEEMAEASERLLELKEDSRNALRRDEFHLVF 617 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L G+++P +F+PL+ + +V+E LA Sbjct: 618 QPQVDARDRKILGAEALLRWTHPSRGMVSPGEFIPLLEDGEMMPLVGQKVIELAAAQLAD 677 Query: 566 HPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + R S+N+ P Q + + + + + + LEITE N + Sbjct: 678 WRKEGLIREDFRLSLNVSPQQFRQADFVSTVRTVLDEHDLPAYLIDLEITEGMIIDNIDH 737 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ +++L + G +IDDFGTGY+N LKRL D++K+D FV+DI + D IVR+ Sbjct: 738 TVAAMKELREMGIHFSIDDFGTGYSNLNYLKRLPLDVLKVDQSFVRDIEHDANDTAIVRT 797 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I +A L+ VAE VET+ Q LL +LG Q QGYL P Sbjct: 798 IIAMADQLKLNTVAEGVETEDQLTLLRELGCQVFQGYLYSPPL 840 >UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43017 Length = 573 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 108/563 (19%), Positives = 203/563 (36%), Gaps = 32/563 (5%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL---LLLCTPYENDFIAGYLVPVFF 248 + + A EK +L + +L+ C + Sbjct: 7 ERVDNTMKFDETQAGFSDLEKEYMSLFEHSPYLLLVINAAGECVRVNEAGLHMNEWTRKE 66 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE-------YSLAFILAVLISF 301 II V + + + + Y+ + + Sbjct: 67 IINQKIEHLTDIYDEKAWDEVMSGNVSHSE-----KAGSVDYTHSYVYTWIPTIIEHKAA 121 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 +L M + + A DPLT LPN R E + + Sbjct: 122 GAVVLGMKKSAAECSEQQDEVYRLANEDPLTNLPNRRCFMNYLENKLLHAASSKEKLAVL 181 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D ++++ G + ++ I L + E + +L G E ++V++ + + Sbjct: 182 FIDLDRFKYVNDTLGHLFGDRVLKHIAERLQAHLPEKSMIARLGGDEFVVVMTDVKEKEE 241 Query: 414 LQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + + N + LL ++ A Sbjct: 242 PVSLTEDLLTIIREPLIMDGFEFTLTGSVGIALSPENGIDAEALLTSADAAMYRAKAKGS 301 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 L+ V + ++ + N +R A+D+G+ LY QP + + G + ++ Sbjct: 302 DR-LEVYNRDVYQEFSRYFHVENDLRKAIDRGEFALYYQPQFCLESGDVCGEEVLVRWKH 360 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQ 586 G ++P +F+ + + L +L + A + SVNL LQ Sbjct: 361 PIEGTISPGEFISIAEETGLIIPIGEWILREACRQKAKWINEGYPKVPMSVNLSLKQFLQ 420 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 NI I ++ K + P+ + LEITE + + ++ + QL K G RI++DDFGTGY Sbjct: 421 HNIVHTIEKILKETKLPPEYLDLEITESVTV-DLDRTLDILNQLIKVGVRISLDDFGTGY 479 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ + + +L +KID FVK I I+ I L ++ L V+AE VET++Q Sbjct: 480 SSLQYVGQLPVHELKIDQSFVKKIGKGKEGEAIISMIIHLGRSLELKVIAEGVETKEQLD 539 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K G +QGY +P + Sbjct: 540 FLQKQGCDLVQGYYYAKPLSTEE 562 >UniRef50_B0KTQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Pseudomonas RepID=B0KTQ2_PSEPG Length = 861 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 117/597 (19%), Positives = 208/597 (34%), Gaps = 39/597 (6%) Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 L L L+ L + R + + ++ E+R ++ Sbjct: 254 QLLWAVLPALLSVLLILGLVMLYLCRHALRSSRAVGLTLLHLQQSNQALEASEQRFRAVA 313 Query: 219 WLAALSVLLLLL-----CTPYENDFIAGYLVP--VFFIIFTLGVGKLRY--PFLNLTWAV 269 A+ + + GY V + + L P+L++ Sbjct: 314 ESASDWIWETDRQQRLTYLSQRFANVTGYPVDDWLGHPLNQLLACDTTPLSPWLDVLTTA 373 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 L N + + ++ + R +L Sbjct: 374 DPQQLANLRCTYRDPNGQNRYCRISARAIWHDGKALGFRGTASDITDEVDAHARIQHLSL 433 Query: 328 TDPLTLLPNFRALEQAPEQEAGKSFCCLRID------------NLEFMSRHYGLMMRVHC 375 DPLT L N L + EQ + D N + ++ G Sbjct: 434 HDPLTGLANRNKLARHLEQ----ALLRGN-DSPPLTLLLLDLDNFKPINDSLGHAAGDAV 488 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 ++ + L ++ + + +L G E +LVL G + + L + I ++ Sbjct: 489 LQEVATRLRDTTRDGDLVARLGGDEFILVLGGMDNRSEIDRFCARLIGLLQQPIIFDGQQ 548 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L +G + L+ Q+ A ++ Q + L Sbjct: 549 LHIGASIGVAQTRTQGFDAGELIRCADIALYQAKADGKN-TWRYFAAEMNQQIQYRRQLE 607 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N +R AL + +L+ QP + G + +L G++ PD F+PL Q ++ Sbjct: 608 NDLRRALRNQEFVLHYQPRYRLGDLRIVGVEALLRWQHPQEGLLGPDTFIPLAEQSDIIV 667 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + P SVNL P L+ ++ + + Q + L Sbjct: 668 ALGRWVLREACRTAHDWPN---DVLVSVNLSPAQFLRSDVVADVREILLDTAFPAQRLEL 724 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE ++ E ++ + L + G R+ +DDFGTGY++ L+ D IKID F+ Sbjct: 725 EITENVMLNDIEGALGTMLSLKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFISG 784 Query: 670 IVTN-TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + N D +V++I +L +A L+V AE VE++QQ L K +QGY + RP Sbjct: 785 LNNNGGSDRAVVQAIINLGEAMGLTVTAEGVESEQQLKALEKDRCHEVQGYYMSRPL 841 >UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKZ2_PSEU5 Length = 886 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 132/750 (17%), Positives = 251/750 (33%), Gaps = 38/750 (5%) Query: 10 NIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLC 69 I + L ++ + + I+ L + + L +L + GV+ Sbjct: 128 GIAFWQLLGFGVLLHLGVLGLIALLLPSPLGAEAVREIALPTLLILPLATATLGVLLNDL 187 Query: 70 GMFCTNLWNFHLSFLQTAVMLGS---QTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 S + + + V+ L R + R Sbjct: 188 LERDRIEQALRFSEARLRAITQAIPDLLLVLDEDGRYLEILCAERSLLYDEPSKLLGRRL 247 Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL-FTAVLIYNMLFYY 185 + + ++ + ++ + V + +L + Sbjct: 248 HDVMPEAEERRFLGFIQQTLNSDSPQLIEYSLPTLGGPKVFEGRALPLEQPPGQKRAVVW 307 Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 L+R I ++ R ++ T + +L I+GY Sbjct: 308 LSRDITDRVNTELERRIAAIAFESQQGMLITDAQN-------RILRVNGAFSRISGYSAA 360 Query: 246 VFFIIF---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--- 299 + ++ ++ + + + ++ + Sbjct: 361 EAIGQTTALLASGRHGPDFYRSMWSSIEATGVWEGEIWNRRKSGEIFPEWLTISAVRNVH 420 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK--------S 351 + + R H A DPLT LPN R L Q + Sbjct: 421 GEVTHYVAAFTDITDRKAAEERIHNLAFYDPLTGLPNRRLLLDRLHQAMAVSRRSNQLGA 480 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET- 410 + +DN + ++ +G +R L ++ ++ + +L G E +++L Sbjct: 481 LMFIDLDNFKNINDLHGHQTGDQVLRVAAERLHAEVRASDMVARLGGDEFVVMLENLGDD 540 Query: 411 ----EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + +H+ L R N GL F G + L+ + Sbjct: 541 PLRAAAQAEHIGMKLLNSLDRSYRLNELGLYSSASIGVVLFGGEACSSDELMKRADMSMY 600 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDE 521 ++ AL + + +++ L IR L G+ +L QP N G + Sbjct: 601 EAKISGKN-ALRFFDPRMQLAVQERLRLEAGIRQGLKNGEFVLSFQPQLEQNAGVIGAEA 659 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNL 579 ++ G+++P F+ L DLQVL+ LA SVNL Sbjct: 660 LVRWQHPQRGLLSPAAFIAQAEHAGLIHALDLQVLQQACGQLARWAATPAFADLTLSVNL 719 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L Q + +++ L +R +P + LE+TE N ++ + +L + G R +I Sbjct: 720 SAHLLYQDHFVEKLLDLLERSGANPARLKLELTETLLLDNMPEAIARMTRLKQHGIRFSI 779 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L++L D +KID F++ + + IVR+I LA L V+AE V Sbjct: 780 DDFGTGYSSMSYLQQLPLDELKIDQTFIRRLPDDASSLTIVRAICALASGLGLEVIAEGV 839 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E+ Q+++L G QGYL G+P P + Sbjct: 840 ESGAQRSVLLGNGCHRFQGYLFGKPMPAME 869 Score = 60.0 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 73/298 (24%), Gaps = 41/298 (13%) Query: 43 FLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA 102 + +LS+ +FG P++ G+ F L V+ G ++ A Sbjct: 60 GIILDARTAVLSMAGLFG----GPLVAGIAGVLAGGFRLWMGGPGVVPGLANVLLPIALG 115 Query: 103 ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADA 162 + R R + + L + + L+ PL A Sbjct: 116 LAY-------RCASRRRLIGIAFWQLLGFGVLLHLGVLGLIALLLPSPLGAEAVREIALP 168 Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 ++ L + VL+ + R E R ++ Sbjct: 169 TLLILPLATATLGVLLN----------------DLLERDRIEQALRFSEARLRAITQAIP 212 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL--------RYPFLNLTWAVSTLCL 274 +L+L Y A + LG R + +++ Sbjct: 213 DLLLVLDEDGRYLEILCAERSLLYDEPSKLLGRRLHDVMPEAEERRFLGFIQQTLNSDSP 272 Query: 275 LNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSE--WLNRRWHLQAL 327 + + L ++++ R L RR A Sbjct: 273 QLIEYSLPTLGGPKV-FEGRALPLEQPPGQKRAVVWLSRDITDRVNTELERRIAAIAF 329 >UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Halorhodospira halophila SL1 RepID=A1WT40_HALHL Length = 836 Score = 623 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 105/637 (16%), Positives = 210/637 (32%), Gaps = 30/637 (4%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + L ++G P V++ + Sbjct: 180 VVTPDGTVRYANPSAANLFARDSTALIGAVIGLPIGGPDAQEIGLRSPAGELRTVEM-RV 238 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 R + + RR + + A ++ Sbjct: 239 REIRWHEQPAHLLNLRDVTERKHIETELRRAAIVFEEAHE---AILVTDAEQRVIT---A 292 Query: 233 PYENDFIAGYLVPVFFIIFTLGVG---KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + GY + + + A++ T + Sbjct: 293 NPAFTEMTGYTEQEVLGKDLALLRSGFHDESFYTAIDDALAKQGYWTGEMWNRCRDGTTF 352 Query: 290 SLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + + + + L ++ R + + +DPLT LPN + Q Sbjct: 353 ATLVTVRAIYDDAGHLTHYLAVLADISRLKEYQSQLERIMHSDPLTGLPNRLVFQDRLHQ 412 Query: 347 EA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + L +++L+ ++ G + ++ + L + E + +L G Sbjct: 413 ALVANQKQTGFFAVLSLDLNDLKAINYSLGHAVGDAILQQLAERLRNALCEEHTVARLGG 472 Query: 399 SELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++L G + + L + + + + L Sbjct: 473 DEFGVLLLGVRDASEVAAITEDLSKGLDEPFQIADRAIPIAASIGIAVYPEQDAGAADLF 532 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q + Q+ ++ E ++ Q ++V L + +R AL+QG L L+ QP + Sbjct: 533 QQANAAMHQAKREG--VSYRFFSEDLTEQARERVQLGSELREALNQGALELHYQPQIDLS 590 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 G + ++ G ++P++F+P+ + L VLE + Sbjct: 591 SGAWVGLEALIRWHHPVQGWISPERFIPVAERIGLVTTLGAWVLEQACRQGRIWLDAGFE 650 Query: 573 P-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 R VN L ++A R++ R + + + +E+TE + ++ L Sbjct: 651 FGRLGVNFAAPELSAPDLAERVLAALDRARLPARYLEIEVTERLLVDPDPEVIQQLQLLR 710 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G +A+DDFGTGY+ L+ L D +KID FV + + I ++I L + Sbjct: 711 NHGVTVALDDFGTGYSALSYLRDLPVDRLKIDRSFVDGLPDDERTLAIAQAIAGLGRNLG 770 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +++AE VET Q+ L +G + QG+L GRP P+A Sbjct: 771 FTIIAEGVETPAQREALIGIGCPWAQGFLFGRPAPVA 807 >UniRef50_Q0A846 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A846_ALHEH Length = 1052 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 100/550 (18%), Positives = 188/550 (34%), Gaps = 27/550 (4%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKL 258 S E+ + V + + I GY Sbjct: 495 ALRKLSAVVEQGPGAVMITDPQGV---IEYVNPAFERITGYTAEEAVGQTPRIIQSGLMP 551 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRS 315 + + A++ + + + A ++ L + + + Sbjct: 552 SSWYREMWAALNRGEPWWGEFHNRRKTGELFWEAGVVFPLRDDQGGITHYIAIKQDVTER 611 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG----------KSFCCLRIDNLEFMSR 365 + RR A D +T LPN E + L + ++ Sbjct: 612 KDAERRLEYHATHDTVTGLPNRALAMDRLETAVRRLAHRRGRGSGALLVLDLSQFRKINE 671 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + I L + ++ L + G E L++L T + + + L + Sbjct: 672 SLGHASGDELLCRIAERLQGALGPHDTLCRPGGDEFLVILPELRTARQAEQVAKALLATL 731 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + M F + LL Q+ + + Sbjct: 732 KAPLVLADQEIFMDARVGVTLFPEDGTDSSTLLRNAYAALSQAKQVARGD-FRFFKPEAN 790 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + + + L +R AL+Q L L QP+ + G++ +L + G ++P +F+ Sbjct: 791 ERAHRWLALEGRLRRALEQETLHLVFQPLVDARTLRPTGFETLLRWTLEEHGPVSPGEFI 850 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L VL + A R +VN+ P+ + + + + Sbjct: 851 PMAEETGLIIPMGEWVLRKACQQAARWRAQTGHCYRMAVNVSPIQITGSDFVATVRTSLR 910 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 R + + + LEITE + +++ L G +++DDFGTGY+ L+++ Sbjct: 911 RTGLPAECLELEITERMLLGGQRRVLQSLQALRDLGVGLSLDDFGTGYSALSYLRQMPFS 970 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 ++KID FV+ ++ SI +A+ L VVAE VET+ Q ALL + G LQG Sbjct: 971 VLKIDRSFVQGAAAGPRGEQLLCSIIGMAQGLGLRVVAEGVETEAQVALLQREGCDLLQG 1030 Query: 719 YLIGRPQPLA 728 Y RP Sbjct: 1031 YHFARPMAAE 1040 >UniRef50_B6R1T0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1T0_9RHOB Length = 972 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 108/645 (16%), Positives = 216/645 (33%), Gaps = 38/645 (5%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL----------KISTFFGDADAIFTV 166 TS ++RL LG + I V PL F + + Sbjct: 301 TSSQTFERLIVLGFTACLIIFIVALFVSRKMSQPLQRIADALSDVAGGNFDVRVEGTRRM 360 Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 ++ + AV + + ++ R+ + + + + Sbjct: 361 DEVGEIARAVKVLQASARERDSLRLNIQRKNKELRKQEQELVKQNTLFDAALNNMSHGLC 420 Query: 227 LLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS-----TLCLLN 276 + + D I I T P Sbjct: 421 MFDTQKRLIVFNQRFDDIFACEQGEGKIGMTWDEMVQCMPLAQEFLEAEGENSVAQQHWP 480 Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + ++ + + + + ++ A D LT LPN Sbjct: 481 STVRSTFTLTLQSEQVILMTLEPQDGGGWVAIFEDITDRQRISDHLSYLATHDALTKLPN 540 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 + + EQ+ + +D + ++ G + + + + L + Sbjct: 541 RLLMNERLQEMKQAALEQDEHFGILWMDLDEFKTINDSLGHAVGDKLLVHVAKILREKVT 600 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 E + +L G E ++ P + +L+ + + + + + F Sbjct: 601 NKEMVARLGGDEFAILSKLPASREQLEQLAKEVLKVVASPCFLEGHEIVVAASVGIAMFS 660 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + + L+ Q+ E+ ++ + ++ L+ + A +L Sbjct: 661 REHQNVDELIRFADLALYQAKNDGRN-TFRFFEDDMAAKIKQRQTLITDLYKATANRELE 719 Query: 506 LYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 +Y QP N E G++ +L G ++P +F+PL + L VL+ Sbjct: 720 VYFQPQVNLATGEISGFEALLRWNHPRYGFISPFEFIPLAEETGLILEIGAWVLDEACSL 779 Query: 563 LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 A P +VNL P + + + + + R + P + LE+TE ++ Sbjct: 780 AAGWPKR---VNLAVNLSPRQIYCEQLLPVVDDVLARTGLDPGRLELEVTETVLLADHLR 836 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + +L K G +I++DDFGTGY++ L+R D IK+D FV + + IV S Sbjct: 837 VRQTLAKLQKSGVKISMDDFGTGYSSLSTLRRFPFDRIKVDRSFVMSMSKDEDAYFIVNS 896 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + DLA + ++ AE VE+++ L + G QGY G+P P Sbjct: 897 VIDLANSLGIATTAEGVESKEIAEQLKREGCTEAQGYYFGKPAPP 941 >UniRef50_C9RXJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C9RXJ9_GEOSY Length = 947 Score = 623 bits (1607), Expect = e-177, Method: Composition-based stats. Identities = 107/687 (15%), Positives = 219/687 (31%), Gaps = 43/687 (6%) Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGL 130 + + L + V + + L R Sbjct: 266 VRFAYIHAASLYWSARDVAMQTAKQPAEGMLLYYSAALSGYTRPLFDG------------ 313 Query: 131 VTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF--YYLTR 188 + + A A ++ + + + L+ + Sbjct: 314 -VAAAFGQAALFPAVEVLVKDAYTAVRPAAFAAISLAETAASAESGLLSPWSSPPEGMMT 372 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYL 243 + + R E+R +L V L + + GY Sbjct: 373 LAQLMSTSSRDMERLHVRLQMSEQRYKSLFEHNTDIVYSTDLHGRLTSVNPAFEQVLGYT 432 Query: 244 VPVFFIIFTL--GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--I 299 +L + + YN + Sbjct: 433 KEEILYTNSLKYIHPNDIPRVTRYFYRALRGNIQTYNLEIPTKSGERLLFQMKNIPIIVD 492 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR----ALEQAP----EQEAGKS 351 V + + R + + A D T LPN + ++ + Sbjct: 493 GKKVGIYGIGRNITEQKKAEEKISYLAYYDIDTNLPNRTKWMELFSEQLDKAKQKRRKMA 552 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS----G 407 + +D ++++ G +R + + ++ + +L + G + L+ Sbjct: 553 VALIDLDRFKWINDSVGHYAGDDILRQLVERIRRVLPPSAELGRFHGDKFCLLFPLKTEA 612 Query: 408 PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 +V + +R I + + F + E LL + Sbjct: 613 QAATEAALRIVREV-ARPIVYEGKEFFVTASVGLAMFPDDGEDEHALLRHADMAVNMAKK 671 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 ++ ++ + ++ + +R A+++ +L L QPI + + + ++ Sbjct: 672 GGGNR-VERYCAQMNEEAMHRLEMGGHLRRAIEENELFLCYQPIVDVHTGAVKATEALIR 730 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS--VNLMPL 582 G++ PD+F+PL + L VL++ + R + VN+ P+ Sbjct: 731 WRHPKLGLVRPDEFIPLAEETGLIHEIGRWVLKTACRQTKQWQEITGNNRLAIFVNVSPV 790 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + + + K+ +SP + LE+TE S+M +++L K G IA+DDF Sbjct: 791 QFQHERFVDNVKQALKQSRLSPSCLHLELTEHSMLRYLSSTMRTMDELRKLGVGIAVDDF 850 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 G+GY+++ LKRL A I+KID F++ + N D IV+++ + L +AE VET Sbjct: 851 GSGYSSFHYLKRLPATILKIDRAFIEQLHANASDEAIVKAMITMGHGLGLETIAEGVETP 910 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L L Y QGY+ P + Sbjct: 911 EQLNRLRDLQCTYAQGYVFCPPLLAEE 937 >UniRef50_A6V697 Sensory box-containing diguanylate cyclase n=9 Tax=Proteobacteria RepID=A6V697_PSEA7 Length = 858 Score = 623 bits (1607), Expect = e-177, Method: Composition-based stats. Identities = 116/724 (16%), Positives = 235/724 (32%), Gaps = 32/724 (4%) Query: 23 VLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLS 82 L +S ++ + + + L V + Sbjct: 121 GYAMLEGELSGRSLADALNADTGDILRAARQAALDEAAISRYVDFGGAPAILVASAIKPT 180 Query: 83 FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYL 142 + L + +V +L L Y L L + Sbjct: 181 SDHAPIDLAKASVLVFLD------RLTPEKLAKLGGDYGIANLHLLAGGAAGDKESLALE 234 Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 + + L A + L + Q + +R Sbjct: 235 GTPHRLAWVSSRPGSAMLRET-ALPLLGIFVVAAGLLFWLSRSALLNAHAVDRQQKVLKR 293 Query: 203 DIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAGY-LVPVFFIIFTLGVG 256 E+R +++ A+ + + + GY +G Sbjct: 294 SNQALQASEERFKSIAEAASDWIWEVDARFVFTYLSTRFREVTGYQPAAWIGRRLDELLG 353 Query: 257 KLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRIYHR 314 + + + + +F + + + + V Sbjct: 354 SDTVNIVKWLEGLPDVGTPSSLVCSFRDELGQARIGKLTATAIRNGAGDGYRGTVADITD 413 Query: 315 SEWLNRRWHLQALTDPLTLLPNFR----ALEQAPEQE---AGKSFCCLRIDNLEFMSRHY 367 + + + D LT LPN LE+ ++ + + L +D + ++ Y Sbjct: 414 EVEAHAKIQHLSQHDALTGLPNRNKLFGFLERQLAEKAGKSPLAVLMLDLDRFKPINDQY 473 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---R 424 G + +I L ++ + + +L G E ++V + ++ L R Sbjct: 474 GHPAGDAVLHAIAERLRASTRDLDMVARLGGDEFVVVSVHVTSRLEVEKFCIRLIEVINR 533 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 +I + +G + + + LL ++ A E + Sbjct: 534 EILHDEQVFHVGASIGVALASEHGDDPRALLRCADVAMYEAKAAGRN-TWRFYSEAMDFH 592 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 ++ +R AL +G+ LY QP + ++ G++ PD+F+ L Sbjct: 593 LAEKKQREAELRAALQRGEFELYYQPRYRTEEGSIASAEALIRWHHPRRGMIGPDEFIGL 652 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + +L + VL A+ P + SVN+ P + +I ++ + H Sbjct: 653 AEESDLIVQIGNWVLRQACSSAASWPGE---VMVSVNVSPAQFISGDIVWQVREALRLAH 709 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + + LE+TE ++ + ++ + L + G R+ +DDFGTGY++ L+ D IK Sbjct: 710 LDARRLELEVTENVMLNDVDGALRTMTALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIK 769 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ ++ D IV++I +L A +L V AE VET+ Q +L LQG+L+ Sbjct: 770 IDKRFIANMEKTGRDRSIVQAIINLGNALNLRVTAEGVETEGQMRILRDEKCHELQGFLL 829 Query: 722 GRPQ 725 RP Sbjct: 830 SRPV 833 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 84/432 (19%), Positives = 167/432 (38%), Gaps = 18/432 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 + + N A D LT LPN A + +D + Sbjct: 168 ITQRKQAN--LFYLAHFDQLTKLPNRVLFMDRLAMTLAEASRTNAQVGLLFIDLDKFKHF 225 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + ++ L +E + + +L G E +++ + L + + Sbjct: 226 NDSMGHAFGDQLLIALAGILARCSREMDTVARLSGDEFTIIVDSISGQKDLDILCWRILD 285 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + E L+ + ++ + Sbjct: 286 ALKLPQQIMGREIFISASIGTAIYPLDDEDANNLMIKADAAMYEAKRNGRN-TYRHYAAG 344 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + + ++ L +R A+++ + LY QP + + G + ++ G++TP Sbjct: 345 MQLYSLDRMSLETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWHHPQRGLLTPIH 404 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRL 596 F+ + + L V+ + + R SVN+ + Q + + + Sbjct: 405 FIEIAEETGLIVAIGQWVISEACRQHQAWLQEGFQPMRISVNISAMQFYQSDFCDMVEHI 464 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 K I+P + E+TE +A++ + + QL + G ++AIDDFGTGY+N L++ Sbjct: 465 LKETRINPAYLEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTGYSNLSYLRKFP 524 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +K+D F+K I ++ IV++I LA++ SL +VAE VET + G ++ Sbjct: 525 IDRLKVDQSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVELHWAESSGCTFV 584 Query: 717 QGYLIGRPQPLA 728 QGY +P P Sbjct: 585 QGYRFSQPLPAE 596 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 98/438 (22%), Positives = 176/438 (40%), Gaps = 16/438 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + E R + A +D LT LPN + E + + +D Sbjct: 311 ALAQEVREREQAQERLNELAYSDSLTHLPNRTLFQDRLHQAMEYAKRHERLIALLFIDLD 370 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + + ++ G ++ I R +++E + L +L G E ++L+ + V Sbjct: 371 DFKRVNDSLGHAAGDRLLQEIARRFGRVLRETDTLARLGGDEFTVILTDIQRPEDAVTFV 430 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 L + M + + LL Q+ + D Sbjct: 431 RKLLDTLRAPFMLGEQSITMSASIGITLYPSDDTAEADLLKDADTAMYQAKSRGKN-TFD 489 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGI 532 ++ ++ + +R ALD LL+ QPI + +G + ++ G+ Sbjct: 490 FYAPELTQSVRARLTMEGDLRAALDTNQFLLHYQPIVSLNGAGVQGLEALVRWQHPVRGL 549 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAG 591 + PD+F+P+ L V+++ LA ++NL P+ + + Sbjct: 550 VPPDEFIPVAEDSGLIHEIGDWVIDAACAQLAQWDARGLSHLTLAINLSPVQFRRDGLVS 609 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI R +++ I+ + + LEITE ++ L G + IDDFGTGY+ Sbjct: 610 RIARRLRQHSIASERLHLEITESLLMEQNRHVAETLQTLDAMGIGLCIDDFGTGYSALNY 669 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L+ +K+D FV+D++ +VR+I +A A L VVAE VE + Q LL ++ Sbjct: 670 LRHFPIRQLKVDRSFVEDMLHAEDTRALVRAIVLMAHALRLEVVAEGVEEKSQLELLREM 729 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGYL+ RP P A+ Sbjct: 730 GCDQVQGYLLSRPLPAAE 747 >UniRef50_Q0AAF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAF1_ALHEH Length = 1023 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 107/615 (17%), Positives = 207/615 (33%), Gaps = 34/615 (5%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + + P++ T ++ + R I + Sbjct: 417 ALARLAAGEDPVQYDYTLTLGGTERTFTTVVRPVRGADNQYLGALAQVRDITEARTTEAE 476 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVG 256 R A T + + I GY Sbjct: 477 LRIAAAAFETHLGMMITDAEG-------RIQRVNDTFCRITGYQQAEVLGQTPRLLSSGR 529 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYH 313 + + V + + + + + + Sbjct: 530 HDERFYQRMWAQVREHGSWEGEIWNRRKNGEIFPEWQTITAVRDDSGEITHYVATLHDIS 589 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + R+ H A D LT LPN R L + + L +D+ + ++ Sbjct: 590 DRKEAERQVHRLAFYDTLTGLPNRRLLLERLAHCLRGNHRSRRQGALLYLDLDHFKAVND 649 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN------ 419 +G ++++ L ++E++ L +L + L++L+ E + Sbjct: 650 AHGHGTGDRLLQALSGRLSNSIRESDTLARLNADDFLVLLTDLAEETQAAARGAEAAAEA 709 Query: 420 --ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + + F ++ + + + Q+ A+ Sbjct: 710 LIKQLEAPLVMDGEPIHLHASIGITLFRNHETKPEVAVQEAEQAMHQAKQSGRN-AICFF 768 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTP 535 + ++ ++V L +R A+ G L L+ QP + + GY+ +L + G + P Sbjct: 769 DPLMQADMLRRVHLERGLRRAVHDGGLTLHFQPQVGPDGDILGYEALLRWPHPEQGPIGP 828 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRI 593 F+P+ Q L +L++ + LA + SVN+ + ++ + Sbjct: 829 GVFIPIAEQSRLIIPLGRWLLQAAARQLAAWARDPATRALTLSVNISSVQFRHDDLVAAV 888 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + + LE+TE + +E+L G ++DDFGTG+++ L+ Sbjct: 889 REALETTGAPAERLKLEVTESLLMEEPDQVCATMERLRALGVHFSLDDFGTGFSSLAYLQ 948 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 RL D +KID FV+ + IV SI LA++ SL V+AE VET+ Q+ L G Sbjct: 949 RLPLDELKIDQSFVQSLEQAPAADAIVGSIIGLARSLSLHVIAEGVETETQRTRLAAHGC 1008 Query: 714 QYLQGYLIGRPQPLA 728 QGYL G P PLA Sbjct: 1009 HRYQGYLFGAPAPLA 1023 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 15/218 (6%), Positives = 43/218 (19%), Gaps = 10/218 (4%) Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA 175 T+R + + + + ++ A + + Sbjct: 261 ATARIRMRSPVDGVERIYTARRVNALPFVVISGEAIDVALGGWRQRAWAMGLGVALAALL 320 Query: 176 VLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY- 234 + + + + +E R L + + + Sbjct: 321 GTALLAHYLHRRSLERALRLEVRGREATQEALQSREARLRALVDAMPDLLFMFDREGRFI 380 Query: 235 ------ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 + + T+ L P + ++ L TE Sbjct: 381 HIHADEPEKLLLPAEQALGKHFRTVLPEPLSTPLKDALARLAAGEDPVQYDYTLTLGGTE 440 Query: 289 YSLAFILAVLISFSVCLLYM---VRIYHRSEWLNRRWH 323 + ++ + L VR + Sbjct: 441 RTFTTVVRPVRGADNQYLGALAQVRDITEARTTEAELR 478 >UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBP4_CHRVI Length = 648 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 103/574 (17%), Positives = 206/574 (35%), Gaps = 38/574 (6%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + R + ++ L++ +F + Sbjct: 68 AELEIQNEELVQSQQRIQEALARFSSFFNTLPIAELVIDRQG--LIHEANLAAQQLFHLR 125 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNY----------NQNFLQGVETEYSLAFILAVLI- 299 T + + + + + F E ++ +A + Sbjct: 126 GTQFHQHFFVRLIAESDQATVVSAWDSLHADAAIVIPEVRFRAKGEADFIGDLHIASIAS 185 Query: 300 --SFSVCLLYMVRIYHR-------SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 ++ + + + R A D LT LPN + EQ Sbjct: 186 LAEGALHYVCAIIDRTEAVRQRQRLREASERLDYLAHHDALTGLPNRAYFQSRLEQCLQR 245 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + L +D + ++ G + + + L +++ + + +L G E + Sbjct: 246 AKRYQRRFALLFLDLDRFKEVNDTLGHHVGDALLCRVAEILSAQIRDVDTIARLGGDEFV 305 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L + H V+ + SR + + + + L+ L+ + Sbjct: 306 IILEDISEPRFIMHFVDRVMDDFSRPLRLEGREFFVTVSVGISLYPDDGLDLETLVRRAD 365 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 Q+ E +S +++ L + +R A+ + + LY QP + E Sbjct: 366 IAMYQTKKSGRN-GFSFFEPTMSAGAIERLHLEHDLRLAMQREEFELYYQPQVDLITGEL 424 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RF 575 G + + G++ P F+P+ L L++LE + + R Sbjct: 425 MGVEALCRWRHPQLGVLLPGLFIPMAEDLGLIDELGLRILELGCRQMVAWDASGLNVPRL 484 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL L + + ++ + +R + P+ + LE+TE + +AE ++ + L G Sbjct: 485 AVNLSVRELERLQLPAQVAEILERTGLDPRRLELEVTESKLMRHAEMAILALNALRALGV 544 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +AIDDFGTGY++ LKRL + +KID F++ + + D I R+I LA L V+ Sbjct: 545 TLAIDDFGTGYSSLSYLKRLPLNRLKIDRSFIEGLTHDVNDDSIARAIIALAHTLGLEVL 604 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE +E ++Q L G QGYL RP + Sbjct: 605 AEGIEAREQANFLFGEGCLQGQGYLYSRPMIAEE 638 >UniRef50_Q60BK5 CBS/GGDEF/EAL domain protein n=1 Tax=Methylococcus capsulatus RepID=Q60BK5_METCA Length = 594 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 91/441 (20%), Positives = 169/441 (38%), Gaps = 18/441 (4%) Query: 306 LYMVRIYHRSE--WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + A DPLT LPN L + + Sbjct: 144 IGSGHDLFEEVANRKQNHLYHLAHYDPLTSLPNRLLLNDRLKRACLRGQRGGYRIALLFI 203 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G ++ + +++ + + +L G E ++L + Sbjct: 204 DLDRFKLVNDTLGHAAGDQLLQGVAGRFAACVRKVDTVARLGGDEFTVLLEPVQGPDEAL 263 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L R N + F + T++ L+ + + Sbjct: 264 AVAAKLAQSLERPFLIQNHEITTSASIGVVLFPEHDATVEGLMRKADAAMYCAKREGRNR 323 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 E ++ ++V L + + AL++G+ + QP + G + +L Sbjct: 324 -FALFTEEMNSTVVERVTLESYLNAALEKGEFCCHFQPQMATADDRIVGVEALLRWTNPV 382 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKN 588 G + P KF+P+ L L LE+ R +VN+ PL + Sbjct: 383 LGRVPPLKFIPVAEDTGLILPLGLWALETACAQQVRWLSQGLPPLRMAVNISPLQFRNRE 442 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++ + +R I + + LE+TE ++AESS+ + +L G R+AIDDFGTGY++ Sbjct: 443 FCDQVRAIVQRTGIRAEHLELELTESAVMADAESSVGILRELRDSGIRLAIDDFGTGYSS 502 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L++ D +KID FV I + +IV++I L + L V+AE VET ++ + Sbjct: 503 LSYLRKFPLDRLKIDRSFVSGIDRIPANELIVKAIVALGGSLGLDVIAEGVETPEELECI 562 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + G QG+ + P D Sbjct: 563 ERCGCSEYQGFRLSEPLTAED 583 >UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodobacter sphaeroides RepID=Q3J1Y6_RHOS4 Length = 833 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 96/683 (14%), Positives = 201/683 (29%), Gaps = 55/683 (8%) Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + F + L + + A R R +R + + Sbjct: 150 VAPFSFTADGVLSDLSDRLVAITGLPAGTRHVDAWWAAMHPCDRRDLRRAWIRSVRGGQS 209 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 D + +++ ++ + + Sbjct: 210 FDAEH-------------RLQMPDGAYRWFRARIVARPRDQDQRVDRWFGIIEDVHERRT 256 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFII 250 + E R + A + + + G + Sbjct: 257 -------TVEQLRESEARFRAFADDAPVMIWVTDTEGRNVFVSRSWLGATGQSLDEALGT 309 Query: 251 FTLGVGKLRYPFLNL---TWAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISFSVC 304 + A+ + + + + Sbjct: 310 GWIDAVHPDDRDATAAITREAMRRRIAYTNEFRIRRKDGGWCWVIDVGHPRLLADGTFIG 369 Query: 305 LLYMVRIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQ-------APEQEAGK 350 + + A D LT LPN + E Sbjct: 370 YIGCCVDISARRQAEDDRVMAQLQVFHMARHDMLTGLPNRHYFGDCYQEAVASLAPERSV 429 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G + + + L ++ + + +L G E ++ + + Sbjct: 430 AVLMLDLDGFKTVNDTRGHPVGDQVLCEVANRLRTSVRSTDTVARLGGDEFAVIQTPIRS 489 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E + L S+ ++G G+ ++ + ++ + Sbjct: 490 EQEACDLARRLIAAISKPFDLEGAVPEVGASVGIAFARGHGDSAEEIMRYADVALYAAKQ 549 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 +E + + +R AL G+L ++ QP+ + + + ++ Sbjct: 550 AGRG-TFRVFDEATDTHLQSRQKMKAALRAALGLGELSVFYQPLIGLRDGQVTACEALMR 608 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G +TPD+F+PL + L VL A P +VNL PL Sbjct: 609 WHRKGAGWITPDQFIPLAEEAGLIGDMGDWVLHEACAQAARWPD---SVSVAVNLSPLQF 665 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + ++ + + P+ + LEITE + ++ ++ L G +I +DDFGT Sbjct: 666 HGGALVDQVASALRASGLPPERLQLEITESVLLDPTDRNIGVLQDLRALGAKIVMDDFGT 725 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+ D IK+D F++D+ I++++ L ++ + E VETQ Q Sbjct: 726 GYSSLGYLRSFPFDKIKVDRSFIRDLPDAREALAILKAVAGLGRSLDMRTTVEGVETQAQ 785 Query: 705 QALLHKLGVQYLQGYLIGRPQPL 727 GV QGY RP P Sbjct: 786 LDCAIAEGVDEAQGYFFSRPLPA 808 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 15/193 (7%), Positives = 32/193 (16%), Gaps = 22/193 (11%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH----------FAQILWRR 202 ++ + A F + + + R +VS F R Sbjct: 70 VAGTQAEQIASFDAEAMRRGSVSAEQEMPGPRGVRRFLVSRRPAGEHLVVTFFEITDLRE 129 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGK 257 +E L L ++ I G + Sbjct: 130 TEGVLRQREAHLRNLLELHPVAPFSFTADGVLSDLSDRLVAITGLPAGTRHVDAWWAAMH 189 Query: 258 --LRYPFLNLT-WAVSTLCLLNYNQNFLQGVETEYSLAFIL----AVLISFSVCLLYMVR 310 R +V + + ++ Sbjct: 190 PCDRRDLRRAWIRSVRGGQSFDAEHRLQMPDGAYRWFRARIVARPRDQDQRVDRWFGIIE 249 Query: 311 IYHRSEWLNRRWH 323 H + Sbjct: 250 DVHERRTTVEQLR 262 >UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodopseudomonas palustris RepID=Q07J13_RHOP5 Length = 891 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 116/713 (16%), Positives = 220/713 (30%), Gaps = 49/713 (6%) Query: 50 CVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLG 109 V+L +FG G + +T V + Sbjct: 175 RVLLLQRGLFGANGEFVGVIARTVPLESYERFFASVAL----GETAAVTMFHTDGTFLTR 230 Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGIKCS--------MYLVGSFFDFPLKISTFFGDAD 161 + L P I I D Sbjct: 231 YPEGTMTRGENLRASLLEPHFAAPAAIVRLTSPFDGEERLGASHKLAQAPIIVVASRGVD 290 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++ ++ A + T M + + +++R Sbjct: 291 SVLADWRQQTVALASAALAAIAVIATLMFLLGRHLRRREDDTQRQLRLEKQRLRLAINNM 350 Query: 222 ALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTL--------GVGKLRYPFLNLTWA 268 + L I G + TL G R + Sbjct: 351 TQGLTLFDAEARLVVCNQRYLEIYGLTTEMVPPGITLREMIQYFRDRGGDRDVIERFLCS 410 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 ++ ++ + + R A Sbjct: 411 GDDFSRGSHEVTIGDKS-------LLITREPVEGGGWVTTHEDITERKRAEARIAYLAHN 463 Query: 329 DPLTLLPNFRALEQAPEQEA-------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 D LT LPN + Q + + + ID+ + ++ G ++ + I Sbjct: 464 DELTDLPNRSSFRQHVQSALANLGDGFNVALLYVDIDDFKGINDTLGHVVGDLLLHHIAS 523 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHW---NNTGLDMGYG 438 L + ++ + +L G E +V++ E + + + S + L Sbjct: 524 DLKRAVGKDGFVARLGGDEFAVVVTNIEAMDEVTALTERVQSALYEFHDCGEHRLSADAS 583 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + +TL L+ + + + + + LL ++ A Sbjct: 584 IGIAIAPQDGKTLDDLVSNADLALYAAKSEGR-RTYRFFKPEMEVALKARHLLGADLKRA 642 Query: 499 LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + + ++ QP+ + G + +L G+++P +F+P+ + L V Sbjct: 643 VVEHQFDVHFQPLVDLRSDQVVGCEALLRWRHPTRGMVSPAEFVPVAEEIGLIDELGEWV 702 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 L + AT P +VN+ P+ ++ ++ + + Q + LEITE Sbjct: 703 LAESCREAATWPA---HMTVAVNVSPIQFRRRTFPLKVAAALGQSGLPAQRLELEITEAV 759 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + ++++ + +L G +IA+DDFGTGY++ L R D IKID FV + Sbjct: 760 LIRDDDAALAILHELRALGVKIALDDFGTGYSSLSYLHRFPFDKIKIDRSFVATLAEEKA 819 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A IV+++ +A A +AE VET QQ+ LL + G Q +QGYL P P A Sbjct: 820 SATIVQAVVSIAAAGDKITLAEGVETIQQRDLLKQFGCQQMQGYLFSPPVPAA 872 >UniRef50_Q2RWS9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWS9_RHORT Length = 1061 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 91/616 (14%), Positives = 198/616 (32%), Gaps = 44/616 (7%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 G + + + + I ++ R+ Sbjct: 449 GGRLAARLRAAMGNRPRLSVALSRLFGHADALLLPTNPRASVITFVDITERKASEAALRK 508 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLR 259 + + + GY Sbjct: 509 LSRAVEQSPASVIITDAR------GTIEYVNPQFEKSTGYRSWEVIGANPRILKSGHIAE 562 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSE 316 + + ++ + + T Y L+ + + LL + + Sbjct: 563 ATYAEMWKTLNEGREWRGELHNRRKDGTLYWEYASLSPVKDRRGRTTHLLAVKEDITARK 622 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYG 368 R QA D LT LPN ++ + + +D+ + ++ G Sbjct: 623 ETENRLIRQANFDELTDLPNRSLCYSRLKEAIVEAEATASIVGVLFIDLDHFKNVNDSLG 682 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + + ++ + L + + + L + G E L++L + + + Sbjct: 683 HAVGDKLLTAVAQRLREVARPGDTLSRQGGDEFLMLLPDLNGSEAGHGVAQAILTALAPP 742 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + M F + + LL + A+ + + Sbjct: 743 FSIDGREIYMAASIGITFFPRDGRSAAELLRNADSAMYTAKESGRN-AICFFSPEMEIRA 801 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ + +R AL +L + QP+ + G + +L G ++P +F+ + Sbjct: 802 AQRLAIEGALRQALAHEELRVAYQPLVRTSDARPIGAEALLRWTSPTLGEVSPTEFIKVA 861 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL+ + A + G + +VN+ ++AG + KR+ Sbjct: 862 EETGLIVPIGAWVLDQAVAEAARLRAEGYGAFQIAVNVSVRQFRGGDLAGLVSDTLKRHD 921 Query: 602 ISPQ--------AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 +++L++T + ++ L G R+++DDFGTGY+ LK Sbjct: 922 FPAAGLELELTESLLLDVT--------PAITTTLQSLSALGVRLSLDDFGTGYSALSYLK 973 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 DI+K+D F++DI + + R+I +A+ L+ + E VET++Q A Sbjct: 974 TFPFDILKVDRSFIRDISSAPDSGALARAIIAMARGLGLATIVEGVETEEQCAFARAEDC 1033 Query: 714 QYLQGYLIGRPQPLAD 729 +QG+L G+ AD Sbjct: 1034 DIMQGFLFGKAMTPAD 1049 >UniRef50_A7BZ46 Diguanylate cyclase/phosphodiesterase n=2 Tax=Beggiatoa sp. PS RepID=A7BZ46_9GAMM Length = 565 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 97/526 (18%), Positives = 174/526 (33%), Gaps = 59/526 (11%) Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYH 313 LT + + ++ + + + + M+ Sbjct: 24 HPEQYQTFLTQLETDSKVQDFEYQAYCRDRRIVWVKETVRAVRDNNGQISYYEGMLEDIT 83 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------------------------EQEA 348 + + + A D LT L N A + Sbjct: 84 QRKLTEEKLRYDATHDQLTGLFNRTAFTDELTKTLIRLKAEWKTENGYQDSESDVERENE 143 Query: 349 G---------------------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 + + +D + ++ G ++ + I L M Sbjct: 144 KEVETDNETASFPLSPFSFPRYFAALFIDLDRFKIVNDSMGHLVGDELLTEIASRLDKEM 203 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 EN+ + +L G E L+ L+ + + S+ + Sbjct: 204 TENDIVARLGGDEFALIFKHIPDLAGLEQRTHQIQQQLSQPYFLKDETFKTTASIGIALS 263 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 ET +L ++ + + + + + +R A++Q Sbjct: 264 KPEYETADEVLRDADTAMYEAKRQGGGK-FVIFQPGMHTRVVNLLRMERDLRQAIEQQQF 322 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LY QPI + G + ++ + + G++ PD F+PL + L L V E+ Sbjct: 323 CLYYQPIIESATGKTIGLEALVRWIHPEQGLIPPDLFIPLAEETGLIKELGLWVFETACF 382 Query: 562 WLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 L ++N+ P+ L Q N + + ++ I +EITE Sbjct: 383 QLRQWQTQFIHHADLGMNINVSPIQLKQPNFVHLVSDILEKTGIKSDTCRVEITENAMIQ 442 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N E +M + L K G + IDDFGTGY++ L++ D +KID F++ I + A Sbjct: 443 NPEGAMAILHDLKKLGVLLYIDDFGTGYSSLSYLQQFPIDALKIDKSFIQKIDASVKSAQ 502 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 I +I L +A L VVAE VE A+L +LQGY RP Sbjct: 503 IAHAIIALGEAFGLKVVAEGVENNFHIAMLKATHCHHLQGYYFSRP 548 >UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=9 Tax=Alphaproteobacteria RepID=B1M3H8_METRJ Length = 829 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 106/691 (15%), Positives = 217/691 (31%), Gaps = 30/691 (4%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA-ILRWQLGTRWRYGLTSRYVW 122 + + + + V++G V + T R Sbjct: 126 LAAGVVTSTRLVGVPLGNRWGEPFVLIGFDGASVRTELVQAMFTATDQGILALSTIRDAA 185 Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML 182 R +V + + ++ F A T+ L ++ Sbjct: 186 GRPVDFKIVALNRGAERLLERPAAALQWQRVGQLFPGAITARTIATLAAMVERGGRSAFE 245 Query: 183 FYYLTRMIVSPHFAQIL------WRRDIAP---SLGKEKRAFTLSWLAALSVLLLLLCTP 233 + + + +E L + + ++ Sbjct: 246 LSRPRSDGGTLYLKVEAGCVGDLLSVTMTDVGDIKAREASFRLLFENNPVPMWVV-ADAR 304 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + V + + + + L L + + ++ Sbjct: 305 DRFLAVNDAAVAHYGYSREQFLSRAPADLAIAAEEATELGLPAAGSLHRRADGSAIEVSL 364 Query: 294 ILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------- 344 + +L R A D LT LPN Sbjct: 365 FQRAMPFEGRQAVLEAAIDMTERRRAEARIAHMAHHDALTGLPNRVLFRDRLGEAIARHA 424 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 CL +D + ++ G + +R + +++++ + +L G E ++ Sbjct: 425 RDGEEAVLLCLDLDKFKIVNDTLGHPVGDALLREAAERIAGCLRKDDLVARLGGDEFAIL 484 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + G + ++ + + +G + + L+ Sbjct: 485 VRGMDLPALADGLIARVIAELGRPFRLEGQDCHIGTSIGVACLPRDGTDPETLMKNADLA 544 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEG 518 ++ A E + + N +R A +G L QP+ + Sbjct: 545 LYRAKAEG-GSTFRCFEPEMDAWVQARRRRENELREAFARGQFSLVYQPLMDARSDRILA 603 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 ++ +L + G ++P +F+PL + L V+++ AT P R +VN Sbjct: 604 FEALLRWHHPEHGPVSPAEFVPLAEETGLIVPIGAWVMQTAFAEAATWPET---IRLAVN 660 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P+ + + + + P+ + LEITE +++ +++ + L G RIA Sbjct: 661 LSPIQFRNRTLVETVRGALAATGLDPRRLELEITESVLLADSAANLATLHALRDMGIRIA 720 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L+ D IK+D FV + NT IVR++ L + ++ AE Sbjct: 721 MDDFGTGYSSLSYLRSFPFDKIKLDRSFVSQVGENTHCTAIVRAVASLGTSLGIATTAEG 780 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET +Q A+L G +QG+L R P + Sbjct: 781 VETPEQLAMLRAEGYDEVQGFLFSRAVPGPE 811 >UniRef50_A4VMP6 Sensory box protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VMP6_PSEU5 Length = 855 Score = 621 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 116/696 (16%), Positives = 227/696 (32%), Gaps = 39/696 (5%) Query: 54 SILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 ++L++ G VV H T V + L A R Sbjct: 167 ALLWVDGQPAVVAAASLATGGADIEEHEGPPSTLVFVDVLDTARLEAIGGQYAVEQLRLL 226 Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 + + PI + F + + + + Sbjct: 227 GEPSDQ-----------TGPIISQTLEDGTAVHFTWTAPQPGRLLLLVTLPVLAAVAL-- 273 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 L+ +L + R++ + + E+R ++ A+ + Sbjct: 274 GLGLLAWLLVRHALRVMHLLDVSYARLASSRSALAESEERFRDVAEAASDWIWETDEQAR 333 Query: 234 Y-----ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 I G+ + L + L L + + E Sbjct: 334 LTFLSNRFRQITGHEPAQWLGRPLLELLITDSAALQNWLEAPHSAPLRSS--YRAADGCE 391 Query: 289 YSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + + R + D LT LPN L EQ Sbjct: 392 RYCRLAARTIQHDGKLLGYRGTASDVTEETRAQARVQYLSQHDALTGLPNRSRLRDYLEQ 451 Query: 347 -------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + + +D + ++ G + + L ++ + + +L G Sbjct: 452 NLASLRSGSTLTLLYIDLDRFKPVNDTLGHAAGDEVLIGVASRLRERTRDGDLVARLGGD 511 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++VL + + + N + S + + + +G + LL Sbjct: 512 EFVVVLHRMGEDNDIDRLCNRIIDALSAPFIYEDQQISIGASIGVALAPTDANQANELLR 571 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE- 515 Q+ + + + +++ +R A+ + L ++ QP + Sbjct: 572 CADIALYQAKDAGRG-TWRAYGREMDQRLHERLRREEELRVAITEQQLEVHYQPRYQSQG 630 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G + ++ G++ P++F+PL + L VL + A P Sbjct: 631 LYIIGAEALVRWDHPQRGMLLPEQFIPLAEETGLIIPLGRWVLRQACQQAARWPG---DT 687 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 SVNL PL L + I + ++ + LE+TE ++++ ++++ Sbjct: 688 VVSVNLSPLQLHDDRLLEEITQALADNGLAGNRLELEVTESALLRETQNTLELLKRIKAL 747 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R+A+DDFGTGY++ L+ D+IKID FV I + D IVR++ +L + + Sbjct: 748 GVRLAVDDFGTGYSSLTTLRHYPFDVIKIDNSFVAGIGQSIEDHSIVRALIELGRGLRMR 807 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V AE VET++Q LL G +QG+ + P P D Sbjct: 808 VTAEGVETEEQLRLLTDDGCTEVQGFHMSHPLPAQD 843 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 621 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 93/430 (21%), Positives = 170/430 (39%), Gaps = 17/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQEAGKSFCCLRIDNLEFMSRHY 367 E R AL DPLT LPN L G + + +D+ + ++ Sbjct: 440 ERELAQGRLTHHALHDPLTGLPNRVLLLDRLEVALAQRSRGGVAVAFVDLDHFKLINDSL 499 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G I + L +++ + + + G E +++ E ++ + L + Sbjct: 500 GHAAGDTVITAAATRLRAVVRPGDTVARFGGDEFVVLAESVVDERDVEGLAERLAGALAE 559 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + G LL ++ + + ++ Sbjct: 560 PFDLAGDEVFVTASIGIAVSSGTGGDAHGLLRDADAAMYRAKEAGRAR-HEVFDSVMRAG 618 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 +++ ++N + AL++ +L+ QP + G + +L + + G++ P +F+P+ Sbjct: 619 AIRRLEIVNDLHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGLIPPLEFIPV 678 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + L VL + + T SVNL L Q +A + + Sbjct: 679 AEETGLINDLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRLAEEVAAALE 738 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++LEITE ++ ++++ +E L + G R+AIDDFGTGY++ L+R D Sbjct: 739 DSGFPADQLVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSLTYLQRFPID 798 Query: 659 IIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 I+KID FV + + N ++ + R+I LAK L VAE VE + L L Q Sbjct: 799 ILKIDKSFVDGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVRELQSLHCDIGQ 858 Query: 718 GYLIGRPQPL 727 GY RP Sbjct: 859 GYFFARPLDA 868 Score = 68.1 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 19/270 (7%), Positives = 57/270 (21%), Gaps = 9/270 (3%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVV-LCACAILRWQLGTRWRYGLTSRYVW 122 + P + + + V + +L + R + + Sbjct: 5 LRPWRRDRGAAGTAVPPTLADRLLAVTDQGVYAVDMAGRCVLANEAAARLLGTVRPLLLG 64 Query: 123 QRLFWLGLVTPIG-IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 + P G L T A ++ Sbjct: 65 AHVHEEHHGRPAGEPAEDCPLCAPLHSGRPARGTATLTAVGHSSLTVDYVSSLVTHEDEP 124 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLG-KEKRAFTLSWLAALSVLLLLLCTP-----YE 235 + + + + + + + E + + A +++ Y Sbjct: 125 VAVFWFQDVAPRNQTESALHQLEMKYRAVTESASDAIVSADARGLIVSWNRGGEAMFGYA 184 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + + G + + + LT + + + TE+ + L Sbjct: 185 AEDVIGKPLTILMPERYRDAHERGMGRFLLTGEPRVIGSGAVEVHAQRADGTEFPVELSL 244 Query: 296 AVLISFSVCLL-YMVRIYHRSEWLNRRWHL 324 + ++R + Sbjct: 245 SHWAEGEGRFFTGILRDITERKRAEAALAR 274 >UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SC92_CHRVI Length = 1124 Score = 621 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 99/536 (18%), Positives = 201/536 (37%), Gaps = 26/536 (4%) Query: 217 LSWLAALSVL------LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS 270 + ++A V+ + + + I L + F FL+ + Sbjct: 421 VLAVSADGVIVEANRRIAEMFGYAIRELIGLPLQELIPPAFRRAHVLHVERFLHGSAYDR 480 Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + + + + + + L+ + ++ + A+ D Sbjct: 481 RMSE-RSELSGYRKDGSIFPVEISLSKIQVDGRWVMVATILDVTERRLAEEELVWHAIHD 539 Query: 330 PLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 PLT LPN + + E Q + + +D + ++ +G ++++ + Sbjct: 540 PLTGLPNRTMIHERLERALRRSKQQGQSVALLFIDLDGFKLVNDSHGHQAGDELLKTVAQ 599 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 L+ ++ + + +L G E +++ E+ + ++ + L + + L Sbjct: 600 RLVDHVRPGDTIGRLGGDEFVVLCDHVESPAAVANLADRLNDLLREPVTLSGRRLFASAS 659 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 G + LL Q+ E + Q +++ ++N +R A Sbjct: 660 IGLAIGHGTTHSADDLLRNADAAMYQAKEQGRD-GWRFFSEEIHEQARRRLDIINGLRQA 718 Query: 499 LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ + + QPI + G + +L GG ++P F+P+ V Sbjct: 719 IERDEFQVRFQPILCAQSQIIRGAELLLRWF-PSGGEVSPAHFIPIAEMSGSIVPIGKWV 777 Query: 556 LESLLKWLATHPCDK--KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 + P SVN+ L + + R+ P+ ++LE+TE Sbjct: 778 FRQACLAERQWRDRFGVEAPYVSVNVSARQLNDEALVEEFRRMLAETGADPERILLELTE 837 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 S+ ++ + QL G R+A+DDFGTGY++ +L RL +KID FV + Sbjct: 838 TSLMSDVIFNLSVLNQLAGLGLRVAVDDFGTGYSSLAQLLRLPLSKLKIDREFVDGLDKR 897 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV ++ +A+A +L V+AE VE Q L LG Y+QG+ RP P + Sbjct: 898 HDSRAIVHAVCSMARAMNLKVIAEGVENASQFGYLRDLGCDYVQGFHFYRPLPPEE 953 >UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2C3_NITSB Length = 765 Score = 621 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 113/573 (19%), Positives = 224/573 (39%), Gaps = 21/573 (3%) Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSWLAALSVLLLLLCTPYE 235 L + + +M+ + H ++ +K A + S Y Sbjct: 184 LELIAITRAINKMLHAIHLYIQKIKQSEMHLAEAQKIANMSSWEYIKDSDTFFCSDQLYR 243 Query: 236 NDFIAGYL-VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 + + + + + + A F +Y I Sbjct: 244 ILGLNMKERLDWEHFLQMIDPQEKLRFIEEIEEAYQKGLKFETVVKFYTPKGEKYLKNVI 303 Query: 295 -LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + S ++ + ++ A DPLT LPN + + Sbjct: 304 KVRKKHNRSTTIIGIAIDVTEEIKAKKQVEFLAYNDPLTSLPNRVSFQDILEKLSKIAQR 363 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + L IDN +F++ YG + + I L ++ ++ ++++ G E ++++ Sbjct: 364 SKERFALIFLDIDNFKFVNDTYGHEIGDKLLIDIATILKETLRSSDLIFRIGGDEFVVLI 423 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 ET+ L ++ + +++ + N + F + + ++ L Sbjct: 424 PKVETKDSLDIVLEKIKESVAKEYRYGNINFSVSCSLGIAIFPDDSDDIETLTRYADIAM 483 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD-QGDLLLYAQPIRN---KEGEG 518 ++ +E + +R AL + +L L+ QP + + G Sbjct: 484 YEAKKSGKNR-FVFFKEEMKKYLDHLQQTTQDLRKALKKEDELTLFFQPKIDIQNNKVIG 542 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFS 576 + ++ G++TP+ F+P+ + +L + D V++ + L + + S Sbjct: 543 AEALIRWNHPQKGLLTPNVFIPVAERSDLIEKIDEFVIKKSFRHLQEWSSDKELQNIVLS 602 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +N+ + + K Y+I P + LEITE + N ++ +E + + GF+ Sbjct: 603 LNISARQFRNPKFLDFLDKNLKLYNIDPSKLELEITETLSMENVSHTVNMLEAIKQIGFQ 662 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY++ LKRL D IKID F+ DI + D I + ITD+A ++A Sbjct: 663 VALDDFGTGYSSLNYLKRLPFDTIKIDKSFIDDIDKDPEDYQITKIITDIAYTFRKEIIA 722 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+QQ+ +L L Y QGYL +P PL + Sbjct: 723 EGVETKQQERILKDLKCFYAQGYLYAKPLPLNE 755 >UniRef50_B8KPF2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPF2_9GAMM Length = 609 Score = 621 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 96/448 (21%), Positives = 176/448 (39%), Gaps = 35/448 (7%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRH 366 + R A DPLT LPN R+ + + + + +DN + ++ Sbjct: 138 LKRQEDRLRYLAYFDPLTSLPNRRSFNEQLNRILKRSQRLNTFSALLFIDLDNFKRINDS 197 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKL------------------YQLPGSELLLVLSGP 408 G + I + L+ ++E++ + +L G E +VL+ Sbjct: 198 IGHGRGDRLLVEISKRLINELREDDAISYYSDSSAEEEHDGNTEIARLGGDEFTVVLADV 257 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 ++ + + S I + + + E + L+ + Sbjct: 258 LHTDDVERIALRIMKTLSEPIPLQTHNPVVTPSIGIAMYPQDGEDAESLVRNADTAMYAA 317 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 A E ++ ++ + + L +R A+ L L QP + + Sbjct: 318 KADGRA-CFRFYNEEMNARSVEHLKLEEDLREAMRTDQLELRYQPQVETVTGAVVSLEAL 376 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMP 581 + + G+++P F+P+ VL+ + + R VN+ P Sbjct: 377 VRWKHPERGMISPADFIPVAESTGQIIELGEWVLKEVARHCVYWDSIGLASFRVCVNISP 436 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L Q ++ I R + P + LE+TE ++ ES++ + QL G +A+DD Sbjct: 437 LQFNQPDLLHYIKGFLGRSGLDPHRLELELTESAIMTDGESNILKLSQLKSLGLDLAVDD 496 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+R + +KID FV D+ + A IV +I LAK ++ +AE +ET Sbjct: 497 FGTGYSSLSYLRRFPINTLKIDQSFVADM-NSADGAAIVDAIIALAKTLNMRSIAEGIET 555 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q A L K GV +QG+ RP D Sbjct: 556 EEQLAYLAKRGVDLMQGFYFARPLYPED 583 >UniRef50_A1WXR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXR7_HALHL Length = 749 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 117/641 (18%), Positives = 207/641 (32%), Gaps = 32/641 (4%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 Q L V + + P + A+ V + S Sbjct: 102 LLAPGGDLTGQLLSDFVAVDAQDALYLHWRALTAARAPQAVELTLAWAEGASCAVRMESS 161 Query: 173 FTAVLIYNML-FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + F I ++ R E + + + Sbjct: 162 VEPTADRSPCRFRCALMDITERRRSEEQLRIAARVF---EDAGDAIVVTDPDGHVQTI-- 216 Query: 232 TPYENDFIAGYLVPVFFIIF----TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 I GY ++ + Sbjct: 217 -NNAFTRITGYTEGEALGNTVCALLDSGRHSEAFHKEKQESLDRSGYWQGEIWHRRKGGE 275 Query: 288 EYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 Y + + + + + + + + R A DPLT LPN + Sbjct: 276 LYPEWLTINRIDDATGQPQHFVAVFSDITQLKDAHSRSEYLANHDPLTGLPNRSLFQDRL 335 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 E L +D+ + ++ G + + + L L+++ + + ++ Sbjct: 336 QQAIAQTQRHEGQVGLMFLDLDHFKTINDTLGHEVGDELLVQVAERLGELVRDVDTVARI 395 Query: 397 PGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E +VL+ + + L + L A + + E + Sbjct: 396 GGDEFTVVLTDC-DPEEVGSIAQRLVEGLGGTFVVDGRELQATPSAGLALYPRDGEDVHT 454 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L ++ L E + + K L +R AL QG+L L QP + Sbjct: 455 LCKAADMAMYRAKEDGRNR-LRLCESGLHQRLLKDTALEEALRRALTQGELRLVYQPQFD 513 Query: 514 ----KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 G + +L G ++P +F+P+ + +L D +V E L + L T Sbjct: 514 ASDPGRVVGAEALLRWHDPASGPISPGRFIPIAERSDLILELDRRVEELLCEQLNTWSAG 573 Query: 570 K-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 S N+ + Q + R+ R+ RY ++ + + +E E A I Sbjct: 574 HAPPAPISFNVSAKSFRQGHWTKRLFRILSRYGVAAEQLQVEFAEGTLSERAGVVPEEIR 633 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +LH+ G +AIDDFGTG+ + LK+L +KID FV + + IVR+ +A+ Sbjct: 634 RLHEGGIALAIDDFGTGFTSLVNLKQLPLAELKIDQSFVAGLGQDEDAEAIVRASLAVAE 693 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A L VAE VETQ+Q L + G Q +QG L+ P D Sbjct: 694 AMGLRTVAEGVETQRQLTWLQEQGCQRIQGSLLSAPLEAED 734 >UniRef50_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q13PE1_BURXL Length = 728 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 131/701 (18%), Positives = 242/701 (34%), Gaps = 28/701 (3%) Query: 52 MLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTR 111 L+ L +G V+ L S + L + A L +R Sbjct: 13 RLAALAEYGIGSVLSDPGFDRLVQLAASIFSVPIALISLVETERQLFAASVGLDVCETSR 72 Query: 112 WRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS 171 + ++ P + + I + G + L + Sbjct: 73 DVSFCAHAIRGDDI----MIIPDARVDARFHDNPLVTGAPFIRFYAGAPLRTASGHALGT 128 Query: 172 LFTAVLIYNMLF----YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 L F R + + ++ RR + R ++ + +++ Sbjct: 129 LCIIGHRPRENFGEQDRRNLRDLAALVLDKLEIRRLEMARRTSQFRFEKIAGTSPDAIIC 188 Query: 228 LLLCT-----PYENDFIAGYLVPVFFII--FTLGVGKLRYPFLNLTWAVSTLCLLN-YNQ 279 + + GY + + L A +L Sbjct: 189 ADEQGLTTFWNPAAEKLLGYRSDEILGRSIDLIAPEQFTARLYQLAAAGESLTEGRTVEM 248 Query: 280 NFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 T + ++ ++R R A DPLT LPN Sbjct: 249 MVRAANGTMIPVELSGSMWREDGRPRFGAILRDITERRQNEERLLRLAHIDPLTELPNRT 308 Query: 339 ALEQ----APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 L + A +E S + +D + ++ G + ++ R L + + + Sbjct: 309 MLREQVELALSKEMTASVMMVDLDGFKDVNDSLGHSGGDAVLVNVARRLQACARSGDTVA 368 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E ++L G + + + S+ + + +++G F G+ T+ Sbjct: 369 RMGGDEFAILLPGLPDAVEAGQIADSVIAAVSQLLTIDGQPVNIGASIGIAMFPGDGLTV 428 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL Q+ A + + T + + AL + L+ QP Sbjct: 429 RELLSSADLALYQAKAEGR-HCRRFFSADLREEATLRRAYQGELARALAHQEFELHYQPQ 487 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + +L G++ P FLP I L+ R ++ + A Sbjct: 488 VRLADSTLVGAEALLRWRHPQKGLLGPGAFLPAIEAGLLAPRIGDWIISMACEQAAQWRS 547 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 R VNL ++A +++ + +++ P A+ LEITE + E + + Sbjct: 548 LVPDFRVGVNLFGAQFRTGDLADKVLAALQAFNLPPAALELEITENIILRHDEHMLGPLR 607 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 +LH+ G IA DD+GTGYA+ LKR +KID FV+ ++ + DA I+R+I L Sbjct: 608 ELHQRGVGIAFDDYGTGYASLSMLKRYPLSRLKIDQTFVRAMLESPPDAAIIRAILYLGH 667 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L V+AE VET +Q A L K G + QG+L G+P P + Sbjct: 668 SFGLEVIAEGVETGEQAARLRKKGCETAQGFLFGKPMPAEE 708 >UniRef50_B3PF41 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF41_CELJU Length = 805 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 129/741 (17%), Positives = 247/741 (33%), Gaps = 68/741 (9%) Query: 39 SSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVL 98 S+ L + C++L ++F+ G R + ++ G + + L T L + ++ Sbjct: 65 SAIHPLLVVWGCLLLGLIFL-GARPWLILIRGHWRNQVSERSLRRAVTHAGLLGFLWGIV 123 Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 + + + + P LVG + L + Sbjct: 124 PLICAIHSNAANTLIISVVCVGMLCAGGFALATVPKAAILFCLLVGIGSELSLLFNPLLQ 183 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS 218 D ++ S A +I + + R++ AQ + + + L Sbjct: 184 RWDLALLLLVYCSTVIAAVITSARTFGA-RLMAEAEAAQQQQLVSLLLHDFETHASDWLW 242 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP-------FLNLTWAVST 271 L A L + G + I + ++ L + Sbjct: 243 ELDANGQL---RDPSPRLASLLGRSLEELHEIPFTTLFQMHPEDGLGGEALSLLRERLRQ 299 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALT 328 + +Q L+ L+ + +R + A Sbjct: 300 GQAFRHLVVPVQAHNKACWWQLSAKPLLDRRGHLIGWRGVGSDVTEQRNAHREMNRLANF 359 Query: 329 DPLTLLPNFRALEQAPEQEAGKSFCCLRI---D-----------NLEFMSRHYGLMMRVH 374 D LT L N +Q + D N + ++ G + Sbjct: 360 DALTGLANRYQFNNRLQQAKTS------LRAEDKLFALLFLDLDNFKTVNDSLGHGVGDK 413 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT 431 ++++ + L +++++ L +L G E L+ G + + + L + Sbjct: 414 VLQAVAKRLQKAIRKDDLLARLGGDEFALISWGEDAVSQAGQIAQRLLRCFHEPCQIDGL 473 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 L +G + + + LL + + E + +++ L Sbjct: 474 NLQIGCSIGIVLAPEHADQPETLLKNADMALYAAKSAGRN-TFQFYERGMGDSAQRRLNL 532 Query: 492 LNTIRTALD------------------QG-----DLLLYAQPIR---NKEGEGYDEILAR 525 LN +R AL+ Q + L+ QP + G++ + Sbjct: 533 LNDMRRALESVPCIKPLCTYVDPHFRWQDQPLLPEFELHYQPQISLADGRITGFEVLTRW 592 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 + G + P +F+PL + N+ + VL + + P G R +VN+ Sbjct: 593 HHPERGTIPPVEFIPLAEESNMIIPLGIWVLVEACRTASHWPA---GWRLAVNISASQFS 649 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 ++ + R + ++P + LEITE +A S+ + +L G R+A+DDFGTG Sbjct: 650 HGSLVPVVKRALQLSGLAPTRLELEITESLLIQDAHSTRQILGELRTLGVRVALDDFGTG 709 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y + L+ D +KID FV + + IV I LA A L VAE +E+ Q+ Sbjct: 710 YCSLAYLRSFPLDQLKIDRSFVTALQQDASARAIVSGIIQLANALDLETVAEGIESPQEA 769 Query: 706 ALLHKLGVQYLQGYLIGRPQP 726 A+L G + QGYL P P Sbjct: 770 AMLRDTGCRLGQGYLYAAPVP 790 >UniRef50_C4XMU6 GGDEF domain protein n=2 Tax=Desulfovibrio RepID=C4XMU6_DESMR Length = 601 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 94/562 (16%), Positives = 188/562 (33%), Gaps = 32/562 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 + DI L L + + L P + Sbjct: 28 KTSLRAMLPDIQNLLESLPSHAALLDGDG-----RIRFANASCLELLRDLDPSAAVGSPF 82 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ--------GVETEYSLAFILAVLISFSVCL 305 ++ ++ AV + + ++ A L + Sbjct: 83 ADSCVKLLPETVSAAVREGLAAVLDGRLPRYEMDLPCGPSGSQIWRALCFTPLRGPTSGA 142 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLR 356 + + R + L A D LT L N +Q + L Sbjct: 143 VATLTDISRQKQLEEHILHDAFHDTLTGLFNRALFINRLDQAIKRLRRNPDALYAVLYLD 202 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + +++ +G + + I L ++E + L + G E +++ Sbjct: 203 MDRFKLVNKTFGHVTGDRLLMVIANRLQKQLRELDTLARFGGDEFAILIEDISGLDEAST 262 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 M + ++ + + E +L S H Sbjct: 263 MAENVLRQLAQPFRLKKQEIFVTCSLGVVVGSAAYEHPDQVLRDADNAMYSSKEHGGDH- 321 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + + T +++ + +R A++ G++ ++ QPI + + G + + Sbjct: 322 YTVFDAGMRVLTQRRMEMELALRQAMESGEITVHYQPIVSLATGDVTGLEALARWQHPRQ 381 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQK 587 G + P +F+P+ + L +L + L + SVN+ + Sbjct: 382 GFIPPSEFIPIAEESGLINELGALILRQSCRRLVELGRENPEGEKLSVSVNISGRQFKRP 441 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + I V LE+TE +A+ ++ I+ L G ++ IDDFGTGY+ Sbjct: 442 DFVQEVAGILAETGIDASRVKLELTESVLMDDADEAVRAIKNLKALGVKVVIDDFGTGYS 501 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + ++R D +K+D FV ++ + IVR+I +A L VVAE VE + +A Sbjct: 502 SLSYIQRFPFDSLKVDRSFVGNMNEAEQNMEIVRAIIAMAHKLGLEVVAEGVELAEHKAA 561 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L +L + QG+ R P + Sbjct: 562 LSELRCESAQGFFFSRAVPGEE 583 >UniRef50_Q8DKE8 Tlr0911 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DKE8_THEEB Length = 1240 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 112/645 (17%), Positives = 220/645 (34%), Gaps = 35/645 (5%) Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 YV R+ + + + S ++ + ++ + L ++ Sbjct: 595 AEAYVQGRVLAIADINTATLAQCHRDFLSQLQVRALLAVPIIQEERLWGLF-LCHHCSSA 653 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL--------AALSVLLL 228 + L R + I ++ +++R + L Sbjct: 654 RPWANDEVELIRQLGEQLSFGIHRAELVSALHQEKERYRRVLEAQTELLYRCTPEGHLTF 713 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVET 287 + AG +I + F A+S ++ Sbjct: 714 GNPAFFRYLAEAGMNCDFGDVIRHPFDPVTQQRFQQHLQALSPAQPISTIECAVTLSGGQ 773 Query: 288 EYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + + R + + + AL D LT LPN L++ Sbjct: 774 LAWFEWTTRAFFDHHGRCVEYQCVGRDITCRKQMEEQLIHDALHDALTGLPNRTLLQERL 833 Query: 345 ---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 ++ + + ID + ++ G + ++ + + ++++ + L + Sbjct: 834 KHCWRQYQRRRDRPFAVVFIDIDRFKRVNDSLGHQAGDQLLITLAQRMQTVVRQGDTLAR 893 Query: 396 LPGSELLLVLSGPETEGRLQHM------VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 L G E +++ + + + + + + + + L + D Sbjct: 894 LSGDEFVVLCEDLDPQQMVAQVQAQVTDLERVIQEPLIIDGHLLSVSASIGVAFSDREAT 953 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL Q+ + + Q L + + A+ +L +Y Q Sbjct: 954 SAATLLRDADIAMYQAKKQGLGQ-WCIFDPQMHTQAQSCFTLESQLHQAIANSELQVYFQ 1012 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 PI G + + + G ++P +F+ L Q L QVLE ++ + Sbjct: 1013 PIVEMKTGAIVGLEALSRWFDPEKGEISPSEFITLAEQAGLIVSLGRQVLERAIQEFSQW 1072 Query: 567 PCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +N+ P L+ N I+ +R + P + LEITE N E++ Sbjct: 1073 RQQDSRRQTMTLGINISPQQLVDANFVSDILAALRRAQLPPHLLHLEITETTMIRNLEAT 1132 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + E+L + G + IDDFGTGY++ RL +L +KID FV+ + + I+ ++ Sbjct: 1133 LQVAEELQQLGVALNIDDFGTGYSSLSRLHQLPIHALKIDRSFVQSLEESQAAQEIIGAV 1192 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L K+ L VVAE VET Q A L LG Y QGY P P+ Sbjct: 1193 IALGKSLRLDVVAEGVETAVQAAQLMDLGCLYGQGYFFYPPLPID 1237 Score = 56.9 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 17/208 (8%), Positives = 43/208 (20%), Gaps = 23/208 (11%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 + L + + + L + +R + + Sbjct: 68 GAHALALQGSANLTETYRMRKKSGGYVWLETLTHPICDEAGNVLFLVTTSRDVTRRRQLE 127 Query: 198 ILWRRDIAPSLGKEK---------------RAFTLS--WLAALSVLLLLLCTPYENDFIA 240 + + + + R VL T N F Sbjct: 128 LELKANQELLEAFFQQSLEACFFMMLDQPIRWDDTVNKEDILEYVLDHQRMTRVNNAFAQ 187 Query: 241 GY---LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 Y + + L + L A+ L + + + + + Sbjct: 188 QYQLPPQELIGLTPRLWFKEDLELAKRLWRALFDLGYFHTELELHRHDGSSFWIEGNYVC 247 Query: 298 LISFSVCLL---YMVRIYHRSEWLNRRW 322 L + + ++ + R L Sbjct: 248 LYNENQEIIGHFGVQRDISDRIRLQAEI 275 Score = 49.6 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 16/165 (9%), Positives = 33/165 (20%), Gaps = 24/165 (14%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGK--LR 259 E L + L + + GY + Sbjct: 3 IDEFEHFTELLVNYTDDLICLHETDGNYLYVTPSSQTLLGYSPEELIGKNPYTLFHPEDA 62 Query: 260 YPFLNLTWAVSTLCLLNYN--QNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHR 314 + A++ N + L + + + + + R R Sbjct: 63 ERIRSGAHALALQGSANLTETYRMRKKSGGYVWLETLTHPICDEAGNVLFLVTTSRDVTR 122 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDN 359 L N LE +Q + + +D Sbjct: 123 RRQLELELK-----------ANQELLEAFFQQSLE-ACFFMMLDQ 155 >UniRef50_A6C049 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C049_9PLAN Length = 572 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 92/546 (16%), Positives = 197/546 (36%), Gaps = 25/546 (4%) Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF---TLGVGKLRYPFL 263 +A +L I+GY F Sbjct: 11 LQAFRDAVDEAGIVAINDTKGRILDVNDNFCQISGYTREELIGSDHRILRSDQHSNEFFR 70 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNR 320 + + Y + + + + L + + L + Sbjct: 71 EMYRTIRRGKTWRGEICNKAKNGRLYWVNTTIVPMFNDQGKIDGYLALRIDISEQKRLMQ 130 Query: 321 RWHLQALTDPLTLLPNFRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 R A DPLT LPN ++ ++ + + + D + ++ G + Sbjct: 131 RLQHLAHHDPLTGLPNRVSILESIQKVIDRKSGKHFALLFMDFDRFKLINDSLGHDVGDK 190 Query: 375 CIRSICRTLLPLMQENEKL--YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN 429 + +I L ++ ++ + +L G E +++L + + N L SR Sbjct: 191 LLEAIADRLRKTVRASDTIQAARLGGDEFVVLLENLHSPDDAILVGNRLLETLSRPYILG 250 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 + + ET +L ++ A + + ++ + K++ Sbjct: 251 GYTIYSSASIGIVTSEHRSETASEMLSDADLAMYEAKAAKQDRPI-VFDRVLRDKAQKRL 309 Query: 490 LLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 + N +R + + +L L+ QPI + E G + ++ + G++ PD+F+ + + + Sbjct: 310 YIENQLRDVISRDELKLFYQPIIDLESGELRGVEALIRWFHPECGMIPPDEFISVAEEMD 369 Query: 547 LSARFDLQVLESLLKWLATHPCD-KKGPR--FSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 + V++ + LA VN+ L + + +++ I Sbjct: 370 MIIPVGNFVVDEACRQLAAWRKTLGPQAPENLHVNVSRKQLEHPTLVSIVAEALEKHEIP 429 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + + LE+TE + E+S+ + L K G ++ +DDFGTGY++ L D++K+D Sbjct: 430 AKCLHLEVTESIIMHDREASIETLNDLKKLGVKLDVDDFGTGYSSLSCLCDFPIDVLKLD 489 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 F+K + +++ ++ LA+ L V+ E +E +Q LL LG + QGY + Sbjct: 490 REFIKRSDRDRE-VLLIHALIILAEKLGLEVIGEGIENIEQLQLLQGLGCRLGQGYFYSK 548 Query: 724 PQPLAD 729 P + Sbjct: 549 PICGDE 554 >UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacillus cereus group RepID=Q81HZ8_BACCR Length = 567 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 106/560 (18%), Positives = 217/560 (38%), Gaps = 33/560 (5%) Query: 200 WRRDIAPSLGKEKRAF--TLSWLAALSVL---LLLLCTPYENDFIAGYLVPVFFIIF--- 251 + R L + +++ L+ + I+ Y Sbjct: 2 LEQRGHALYDSSLRDLKLALDESSIVAITDRKGLITYVNDKFCEISKYKREELIGKDHRI 61 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 + F +L + + T Y + + ++ + + Sbjct: 62 LNSGHHPKTFFQDLWKRILNGKVWTGEIRNRAKDGTYYWVKTTIVPFLNEKGEPYQFIAI 121 Query: 309 VRIYHRSEWLNRRWH-------LQALTDPLTLLPNFRAL----EQAPEQEAGKSFCCLRI 357 + R A D LT LPN L + + + Sbjct: 122 RNDISSRKEAEHRLRLSESRYRELAYHDALTSLPNRLQLITTVNELIADKKEFGMIYFDL 181 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G M+ + + L ++ E + L +L G E ++L+ + + + Sbjct: 182 DRFKLVNDTLGHMIGDLLLSEVASRLHYVLGEKDVLARLGGDEF-VLLTKNHRQDDMSQL 240 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + S + + + + + ++ LL + A Sbjct: 241 ATSVLSCFQAPFMLEGHEVYISASLGLCSYPQDGQDVETLLKNSDLAMYSAKEQGRNAA- 299 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGG 531 + + + +++ + ++ A+ +L + QPI + + G + ++ + D G Sbjct: 300 CFFTDELRAKINRRMKVEFALQKAIRDEELDVALQPIIDLKTKRYSGIEALVRCMTED-G 358 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 ++P +F+P+ + L + VLE + T P ++G + SVNL L+QK Sbjct: 359 PISPSEFIPVAEESGLIIKLGDWVLEKSCRLFKTLPNYQEGLKLSVNLSIQQLMQKRFIL 418 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + + KR P +ILEITE A + + + +++L G IA+DDFGTGY++ Sbjct: 419 SVRSILKRTGFPPNRLILEITESIAVRHFDYIIATLQELRNMGVLIALDDFGTGYSSLYY 478 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLD--AMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+L DI+KID F+++ + IV+S+ ++A + +L+VVAE VET +Q++LL Sbjct: 479 LKQLPLDIVKIDRNFIREFHYDHAQPERTIVKSVIEIAHSLNLAVVAEGVETVEQESLLQ 538 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + Y+QG+ +P + + Sbjct: 539 SMSCDYVQGFYYAKPLSVGE 558 >UniRef50_A3J9Q2 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J9Q2_9ALTE Length = 1020 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 104/565 (18%), Positives = 204/565 (36%), Gaps = 29/565 (5%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYL 243 +I H L ++D + + + T + +V++ I GY Sbjct: 446 LIEELHQRNSLRQQDQDGNDQQPVTSQTFLDQTSEAVVIAGADGRIQSVNRSFCEITGYT 505 Query: 244 VPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + + L +S + Y ++++ + Sbjct: 506 SKEAIGGSPSILKSGIHTTHFYEALGLCLSENDRWKGEIWNRRKNGEVYPQLGSISIIRN 565 Query: 301 FSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAG 349 + + +++ DPLT LPN + + Sbjct: 566 DDGSIRNYVAVFSDVSKTKEAENNLFFAQNHDPLTGLPNRQYCLDKVSHVIAERAQTVHE 625 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L ID + ++ G +R++ R L +N L + E +LVL Sbjct: 626 VAVVFLDIDRFKLLNDARGHHTGDSFLRAVARRLAEACPKNGLLCRWGADEFVLVLEQVT 685 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 R+ +V L ++ + L + + Q L+ + Sbjct: 686 NRDRIAVIVQTLFNALAKPLKLEGHELIPSACVGISFYPEDAADAQGLMQAAETALYLAK 745 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 +++ +++ + ++ + + +R A+ +L L QP + G + ++ Sbjct: 746 ERGP-SSIELFTPLLAERLQRKFEVASELRRAVQNDELTLNYQPQVDCKTAALLGVEALV 804 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPL 582 G+M+P F+PL + L VLE + +A +VN+ P Sbjct: 805 RWQHPVNGLMSPATFIPLAEELGLIGLLGDWVLEKAMAQMARWRDQGHPIPQVAVNIAPQ 864 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L+ A I L ++ + + LEITE + + ++ L G +AIDDF Sbjct: 865 QLV-PGFADHIRDLLAKHQLPASMLELEITEGAL-ERDDRIIGLLQALRDMGVLLAIDDF 922 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ +K L +KID VF+ D+ + + I+R++ L + V+AE VET+ Sbjct: 923 GTGYSSLAHIKHLPVTCLKIDKVFIDDLPDDAYNVAIIRTVLALGHSLGFRVLAEGVETE 982 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 +Q L + G+ +QGY G+P Sbjct: 983 EQFLFLVEQGIDTIQGYYFGKPMEA 1007 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 620 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 107/619 (17%), Positives = 211/619 (34%), Gaps = 40/619 (6%) Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 I I ++ + + + + A+ + + ++ A + F Sbjct: 25 AALTIAIVAVLFCAAALYRNADPVLEWTSSMIAVLAI-AITAILFARNGQMIGFRNFHTP 83 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF- 248 IV L E + + ++ + GY+ Sbjct: 84 IVE-------------TLLQSEAVPLAILDRDGV-----IMEMNVASSNTLGYIRQDLLG 125 Query: 249 -IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCL 305 + L R + N N L I + + + Sbjct: 126 KPLAPLLEPGSRNSLQEMLDHALQGKSEQRNINITHRSGFPLELQIISSPMMREDEVIGT 185 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + + + R A D +T LPN E + C L + Sbjct: 186 VIVSQDLSDRKRNIERIRYMAYYDDMTGLPNRTLFHIRMNESLAFAREHDRMIGLCYLDL 245 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ +G + + L + E + ++ G E L+L E+E +L + Sbjct: 246 DRFKLVNASFGREFGDMLLLQVAERLTRAIGEQGIVARMEGDEFALLLQDIESEEQLMEL 305 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + L + ++ LL + + + Sbjct: 306 SRGMLHAIDEPFELKGFPLHITGSLGAVTSLVKEDDGYSLLKKADIALVKVKESGKNDCM 365 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGG 531 E S + +++ L + + A+ + + +L QP + G + ++ G Sbjct: 366 -LYSESWSNSSFERLTLQHEMYRAIQRKEFILLYQPQYDLVSGMMVGVEALVRWRHPAKG 424 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 ++ P +F+P+ + + + VLE + SVNL +Q+++A Sbjct: 425 MIPPGEFIPIAEESGMIVQIGDWVLEEACRQNKAWQDAGLPPMPVSVNLSIRQFVQQDLA 484 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ + ++ + P+ + LEITE + + +L G I++DDFGTGY+++ Sbjct: 485 SKVASVLEKTGLKPEYLDLEITESMTM-DTGHVSRCLLELTDMGVGISVDDFGTGYSSFH 543 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK D +KID FV+DI + DA IV +I +A ++ V+AE VE +Q L K Sbjct: 544 YLKNFPIDRLKIDRSFVRDIQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRK 603 Query: 711 LGVQYLQGYLIGRPQPLAD 729 +QGY P D Sbjct: 604 HNCDEMQGYFWSPPVSSTD 622 >UniRef50_C5T452 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T452_ACIDE Length = 1051 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 109/573 (19%), Positives = 199/573 (34%), Gaps = 39/573 (6%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPV 246 + ++ A G E R ++ + V L+ I GY Sbjct: 467 AVVQDISARKQMEASLRGNELRQRSILQRLPVGVCLVQDDGRMTFRNARFVEICGYSQDD 526 Query: 247 FFIIFTLGVGKLRYP-----------FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 P + + + + + + Sbjct: 527 LPTSEDWWRAVYPDPEYRERTRAAWAAACASAREGSGTIASGEYTIRCKNGQQRVVEIAG 586 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + L + + + A DPLT LPN R L + Sbjct: 587 VTMDD---GHLVTMVDLSQRKADEEEIRYLAFYDPLTRLPNRRLLMDRLQQALATSARHQ 643 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +DN + ++ G ++ + + L + E++ + + G E ++VL Sbjct: 644 RSGALLLLDLDNFKTLNETRGHERGDLLLQQVAQRLRQCVHEDDTVARPGGDEFVVVLED 703 Query: 408 PET-EGRLQHMVNIL-------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + + F G +ET+ LL + Sbjct: 704 LGDNPEEAAARSEEIGQKILAALREPYQLDAEVHHSSLSMGITIFSGMRETVDELLKRAD 763 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKEGEG 518 Q+ L + + + + + +R L QG LY QP + G Sbjct: 764 LAMYQAKGAGRD-TLRFYDPRMQAAVSARAAMELDMRVGLAQGQFELYYQPQIEHGRITG 822 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFS 576 + +L G ++P +F+P+ + L VL++ + LA + Sbjct: 823 AEALLRWRHPQQGFISPAQFIPMAEESGLILPLGEWVLQAACRRLAQWSQQPGLAELDLA 882 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ P Q +++ + LE+TE + E ++ + QL +G Sbjct: 883 VNVSPRQFHQGGFVPQVLAALAGSGADGHRLKLELTEGLLLEDVEDTIEKMGQLRGYGVG 942 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++DDFGTGY++ LKRL D +KID FV+D++T+ DA I R++ LA + L V+A Sbjct: 943 FSLDDFGTGYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIARTVVALATSLGLRVIA 1002 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+ Q+ L + QG+L+ P +A+ Sbjct: 1003 EGVETEAQREFLARSHCHAWQGFLLSPPLAVAE 1035 >UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=A7HQX0_PARL1 Length = 991 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 117/745 (15%), Positives = 234/745 (31%), Gaps = 59/745 (7%) Query: 13 IFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL-FIFGWRGVVPVLCGM 71 IF+L+ +V ++ + A+ FL L+++ G+ + + Sbjct: 267 IFSLSPWWDLVFRTIALALFGSAVFMLERFFLESERHSATLAMVSRWLGYAVLAGIPLAF 326 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + ++ +L VV+ L Q L + Sbjct: 327 LTASGAALYVRLFLAVALLAGAPLVVM---------------AALRGVRPAQLLIPGAAL 371 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 I S + + + F G + + Sbjct: 372 FAIAGFFSAFHAAGWVPGTFAGTVFAGGIFTTALTLFAFAAAYHAQGG------------ 419 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 A I R A W + L + + G Sbjct: 420 -RRRADIGTLRSEQRHAFALSGARMGVWDWD--IAGDKLYVSPSVEAMLGLDAGTLDGNE 476 Query: 252 TLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAVLISF---S 302 + + +A + + + Sbjct: 477 VAWREHMHPADRETYRNALNAYIERGTVSFTLDFRMRHSDGVFRWVALNASCVAGPENYA 536 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFC 353 + VR + R ++ D LT LPN + + Sbjct: 537 TRCIGTVRDISAQKHAEERLMHDSVHDSLTGLPNRALFMDRMSRAIRRRGLLERPRAALL 596 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + +I R L L+ +++ + ++ G ++L+ Sbjct: 597 LIDLDRFKTVNDSLGHSGGDALLIAIARRLESLVTQDDTVARIDGDAFAVLLTTRTERED 656 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + I + + E + L + ++ Sbjct: 657 ALAFAEQASEFLRQPIEVAGHEVYPTCSVGVAICEDAHEHPEELFTEAEIAMYRAKRSGK 716 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 ++ E + +T + L +R A+++ ++ LY QPI + G++ ++ Sbjct: 717 AR-IELFEPGMRSETDDHLTLETDLRHAIERREMELYYQPIMSLTDGGVRGFEALIRWNH 775 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTL 584 G++ PD F+PL + + L + + LAT SVN+ L Sbjct: 776 PKEGLLAPDNFVPLAEELGVITEIGRFALRAASEELATWQKLFPMERALTVSVNVSSRQL 835 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 L+ ++ + R+ R I + LE+TE N E + + ++ G +++DDFGT Sbjct: 836 LRHDLIDDVKRVLNRIDIERGTLKLEVTESLVMENPEFAASMLTRIKALGAGLSLDDFGT 895 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+R D +K+D FV + + +I+RS+ LA + VVAE E++ Q Sbjct: 896 GYSSLSYLQRFPFDTLKVDRSFVAGMSVDRETPLIIRSMVTLAHDLGMEVVAEGTESESQ 955 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L +G Y QGY G+P A+ Sbjct: 956 ARDLADMGCDYGQGYYFGQPMRAAE 980 >UniRef50_B7KTR4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Methylobacterium extorquens group RepID=B7KTR4_METC4 Length = 1003 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 107/563 (19%), Positives = 200/563 (35%), Gaps = 34/563 (6%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFI 249 R+ A E +L A + V L + GY + Sbjct: 436 TDLTASRQSEAALRSAEADYQSLFQNAVIGVYRARLDGGIVQANRALARLHGYGDADLSL 495 Query: 250 IFTLGVGKL------RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 FL + ++ V+ + Sbjct: 496 PEGGFSHDWYIEPGRHEAFLACLEREGHVEDFVSEVR-RHAGGERIWVSETAWVVRDAAG 554 Query: 304 C---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 V + A D LT LPN R ++ Sbjct: 555 RPIWFEGTVADATERKRAQALIEHMARHDALTGLPNRRLFQETLAREIDGARRDGGSVVV 614 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 C +D + ++ +G +R I L ++E + + +L G E ++L + Sbjct: 615 LCCDLDRFKAVNDTFGHPAGDALLRVIAGRLRATLREGDVVARLGGDEFAIILPSRGKQR 674 Query: 413 RLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 R+ L R + +G + + ++ L ++ Sbjct: 675 RIAAFARRLIQAAGRPVDLGGRATTVGVSIGVAVWPKHGDSADTLFKNADIALYRAKDSG 734 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 E ++ + LL +R ++ G L+ QPI + +G++ +L Sbjct: 735 RN-TFRFYESGMALAVVTRNLLEIEMRESIRSGGFALHYQPIFALADGAPQGFEALLRWN 793 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 G ++P F+PL + L + L + A+ P R +VN+ + + Sbjct: 794 HPLRGPISPGAFIPLAEESGLITQLGAWALHEACREAASWPG---DLRVAVNVSAVQFRK 850 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + ++R + + LEITE ++++ + ++ +L G RIA+DDFGTGY Sbjct: 851 TGLEQSVMRALAASGLPAGRLELEITESVLMQDSDAVIGSLHRLRAMGVRIALDDFGTGY 910 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L R D IKID F++DI + A +VR++ L + +++ AE VET++Q Sbjct: 911 SSLSYLCRFPFDKIKIDRAFIRDIDE-PVAAAVVRAVVGLGERLGMAITAEGVETEEQLV 969 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 + + G +QG+L+GRP P A+ Sbjct: 970 QVRRKGCTEVQGFLLGRPLPAAE 992 Score = 55.7 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 20/287 (6%), Positives = 55/287 (19%), Gaps = 15/287 (5%) Query: 48 PLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQ 107 V ++ + + + + + + Q + +V+ Sbjct: 41 IFAVPMAAIALIDADRIRFRARYGLAEAVIDREDALCQHTIRQPRGHALVVSDLIRDERF 100 Query: 108 LGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVV 167 + + G + L + + G + +S+ +V Sbjct: 101 VHSPLVVGAPHARFYA---GLAIRSGAGRVVGTLCLMDR-VPRDDVSSDRVRVLQELALV 156 Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL- 226 L R + R A E+ A W Sbjct: 157 AEAHLELDEARRASEAAERRRAEAHLLEWEARQRALEAAHAMAEQIAAFGHWRIDAGTRT 216 Query: 227 -----LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT--WAVSTLCLLNYNQ 279 + + L ++ + + + Sbjct: 217 IAWSDGIARIFGRNAERATLPLETHIGFYHPDDRERVWAAMDEALAGRSRTLGGGYEHRS 276 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWH 323 L+ +A + L+ + +R Sbjct: 277 RILRPDGEIRVVAVHGIGEHDEAGRLVSIFGVCLDVTGMARSEQRLR 323 >UniRef50_Q1YF74 Possible signaling protein with EAL, GGDEF domains n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YF74_MOBAS Length = 808 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 117/744 (15%), Positives = 250/744 (33%), Gaps = 29/744 (3%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + + ++T F + + P+ I S ++ + ++ L + + + Sbjct: 50 MAVSAAVAGLGVWTTHFVAMLGFRPDVVLGYDPMVTIVSVFVGILFVGLPL--AATVLVH 107 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 R L + + H + + + ++ ++ + R Sbjct: 108 SRAARMALGAIAGLGVGAMHFTGMSALQGCLAAYDPLVTLISLFAGAGFFAAAMSMPPRG 167 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + +V + + + G + + + V L +L + + Sbjct: 168 KQRLAVATLMVLGVCFLHFIAIAGLTLSAAPAAEVWIVEPVTLSAFVALAALMIFITAFI 227 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPY 234 + S A S + + L + ++ L Sbjct: 228 LAVNGEKLDASSRAAAADAAEHLRVLSAALQNMSNGLVMVGPDGIITLHNERAYELLGIG 287 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 N+ +G + F F G + + + + + Sbjct: 288 PNELRSGLALSSFLDNFGHKAGWDAARIDRVIDNHTVWMRRSTITRVEHHLADGRVIGVA 347 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGK 350 + + + + A D LT LPN R+ + + Sbjct: 348 CCPMAD--GGAILTYDDMTEARQVQATITHMAYHDALTGLPNRRSFQDELKARFDSAKPT 405 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G + + + L N+ +++L G EL ++ P Sbjct: 406 TIVMIDLDRFKAVNDTLGHPVGDALLIQVADRLRACCNPNDLIFRLGGDELAIL---PGD 462 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + R + + +G D + + Q ++ Sbjct: 463 DEHSDTLARRVVEGFERPFTADKHRISIGCSVGLATADDVDDPDLV-VRQADLALYKAKK 521 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 + ++ E + K+ L + AL +G L QP+ N E G++ ++ Sbjct: 522 NGRNR-IERYESGMMEDAVKRRDLEMDMVRALKEGQFSLNYQPLFNLPTRELVGFEALIR 580 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G++ P +F+PL + L VL + + P + SVN+ P+ L Sbjct: 581 WNHPTLGLVPPVEFIPLAEETGLITEIGEWVLNEACREASHWPGE---LYVSVNVSPVQL 637 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + ++ ++ R + ++ Q + LE+TE + + L G RIA+DDFGT Sbjct: 638 HKTDMLRQVTRALAEHGLTAQRLELELTETAMVDDGRRINATLTALRSLGVRIAMDDFGT 697 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+ D IKID F+ + ++R++T +AK S++ E VE+++Q Sbjct: 698 GYSSLAHLREFDLDRIKIDRSFIDSAPDDVSSLAVLRAVTMMAKDLSIATTGEGVESEEQ 757 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 A L LG QGYL+GRP Sbjct: 758 LARLLDLGCGTAQGYLLGRPMTAE 781 >UniRef50_B5W9L6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Arthrospira RepID=B5W9L6_SPIMA Length = 1190 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 99/597 (16%), Positives = 196/597 (32%), Gaps = 34/597 (5%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 A ++ + ++ + +V + + + E++ + Sbjct: 575 AGLGVPILADNRVLAVLVFLMSMPREQDNRLVKLVSSVAMQLGSVFQRKQAEEKYRDIFE 634 Query: 220 LAALSVLLLLLCT-----PYENDFIAGY---LVPVFFIIFTLGVGKLRYPFLNLTWAVST 271 A + + L I GY + V + + T Sbjct: 635 NALEGIFQIDLQGKYISANPALAQILGYDSQQQLLVRGSQIKNVYADPETYNRFINLLQT 694 Query: 272 LCLL-NYNQNFLQGVETEYSLAFILAVL----ISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + N+ + + + + + + + + A Sbjct: 695 RGSVSNFEAQVYRRDGEAIWIWQNARAIYSDRHNRVLYYEGSIMEITHLKETEAKLRHSA 754 Query: 327 LTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 D LT L N + + L +D +F++ G + + Sbjct: 755 SHDSLTDLWNRAFFLDKLDDSIRKCKTLDNYQFAILFLDLDGFQFINDSLGHAIGDQLLI 814 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 + + L + ++ L +L G E ++L + + I + Sbjct: 815 EVSKRLTDSV-DSHILARLGGDEFTILLENIRDIQEAIDVAERIQESLKLPIFLEKNQIF 873 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 G + N ++ +L ++ + + +++ L Sbjct: 874 TGASIGIVEGNSNYQSSPEVLRDADTAMYRAKRQGKG-CYVVFDSTMRTNALRRLYLQTQ 932 Query: 495 IRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL + L QPI G++ +L G+++P +F+P+ + L Sbjct: 933 LRLALQEQQFELNYQPIIELSTGTIAGFEALLRWDHPQEGLISPAEFIPIAEEAGLIVDI 992 Query: 552 DLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VL L+ SVNL +++ RI ++ ++ + Sbjct: 993 GEWVLRQACFQLSEWKEKFAVYSNLMMSVNLSSQQFTN-DLSRRISKILVETGVAGSELK 1051 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE ++ E ++ ++QL + +I IDDFGTGY + L + DI+KID FV Sbjct: 1052 LEITETAIMNDPELAIATLQQLKQQQIKICIDDFGTGYCSLGYLHKFPVDILKIDRSFVS 1111 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I IVR I LA++ + +AE +ET +Q L +Y QGY RP Sbjct: 1112 QIPEGEDKREIVRVIVALAESLKMDAIAEGIETAEQLHHLQNFKCKYGQGYFFFRPL 1168 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/183 (6%), Positives = 44/183 (24%), Gaps = 14/183 (7%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI-LWRRDIAPSLGKEKRAF 215 ++ ++ +++ + R + + +I + A + ++ Sbjct: 280 LYSPVYRQILLLSGTMMLFIMVGTACLVVIIRPLTNQISQEIWERHKAEAELIKEKNFTQ 339 Query: 216 TLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW--- 267 TL ++L + GY + + + W Sbjct: 340 TLLEANPAFFIVLDVEGKVKFMNPSMLNTLGYKQEEVEGMNYSATFVPKEEGKSAPWVFE 399 Query: 268 -AVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSEWLNRRW 322 ++ + + + + E + + + + + + Sbjct: 400 LMINRRLPIRTEETMITKDDREIIVEWYGRAVFNKETDEYEYFVGAGLDITDRKRADEEL 459 Query: 323 HLQ 325 L Sbjct: 460 QLL 462 >UniRef50_Q7NXK6 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NXK6_CHRVO Length = 816 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 112/596 (18%), Positives = 215/596 (36%), Gaps = 24/596 (4%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 F + + +F F L + A+ R + Sbjct: 216 FVRREGGLLYGQVSLVFRPDEEGQPGFLMLITDVTERKRAEQALRDEKERIRITLNSIGD 275 Query: 217 LSW------LAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS 270 + T +++ G V + G + + L + Sbjct: 276 AVIATDANGNITFLNPIAEDMTGWQSREALGEPVEKIMPLRESSQGHAMFNPIRLVLSEQ 335 Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQAL 327 + N + L + ++ + + + + + + A Sbjct: 336 RSVGMAMNCALQRRDGQLLELEDSASPILDHAGKLTGAIIVFHDVSEARAMAVKMTHLAH 395 Query: 328 TDPLTLLPNFRALEQA----PEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN L+ +Q L ID+ + ++ G + ++ + Sbjct: 396 HDALTNLPNRMLLQDRTQQALQQAAHSGDRLGLYILDIDHFKVINDSMGHSVGDQLLQRV 455 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMG 436 R L ++ + + + G E ++++ G + M + + S + D+ Sbjct: 456 ARRLQAALRPCDTVSRQGGDEFIILVPGLGGIEQAGAMADKMLKAISEPYLLDGNRYDLS 515 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 G + + + + L ++ + + L IR Sbjct: 516 GSIGVGIYPDDSKNQEELYRHADAAMYRAKQEGRNR-YRFFSSEIEEALLTRQALERHIR 574 Query: 497 TALDQGDLLLYAQPIRNKEGEG---YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 +QG L+Y QP + G G + +L I++P F+PL + L L Sbjct: 575 MGAEQGGFLVYYQPKVDAGGGGVVGLEALLRWRNDKDEIVSPSHFIPLAEETGLIVPLGL 634 Query: 554 QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + R +VN+ + +++ + + R+ K + + + LEITE Sbjct: 635 FVLRQACLDGKRWLDAGRRLRIAVNVSAVQVMESDFCDAVRRVLKETGLPTELLELEITE 694 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + E +M + +L G IAIDDFGTGY++ LK D++KID F+ D++ + Sbjct: 695 GVLAQDVERTMSVLAELKSLGVSIAIDDFGTGYSSLSYLKLFPLDVLKIDQSFIHDMLDD 754 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A IV +I +A+ L +VAE VE ++Q L +LG + +QG+L GRP+P A+ Sbjct: 755 RHSAAIVAAIASMAQGMGLRLVAEGVEREEQARELLRLGCRIMQGFLYGRPEPAAE 810 >UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8L0_MAGSM Length = 714 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 102/612 (16%), Positives = 210/612 (34%), Gaps = 30/612 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 P +A F ++ + I R+ + L + Sbjct: 90 LVHPYDAPNKPVSVEAYFLLMTHGDDAGQLWIAFHSMEETRRLQERLENTEALLAQSKDQ 149 Query: 207 SLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFF-----IIFTLGVG 256 + TL VLLL I+GY + Sbjct: 150 LTYYARLVTTLYDNTQEGVLLLDDQGTVQAVNNAYTIISGYHWEELLGKSVCLCHGGLCE 209 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYH 313 + + + Y + ++ + + +VR Sbjct: 210 ESNAELQTILSHTRCDGSWEVQWQNSRRNGEFYLEQIRVTMIEDLNGTPQSYVVVVRDLS 269 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + + + D LT LPN EQ + L +D ++ Sbjct: 270 YQDSSIKGARTASHEDALTGLPNRSLFADRLEQVLTHAKRSGEKVAVILLGLDGFRKIND 329 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---N 422 G + + + + ++ + + ++ E + + + ++ + Sbjct: 330 SLGHQIGDQILTIMAQRFQTNLRGGDTVARMGSDEFGFIARDLISTQSILSVLGKIKRTL 389 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S I ++ L G + L+ ++ A + + Sbjct: 390 SAPIKIADSELVFTAGIGISVTPDDSLETDTLIRYADAALGRAKAGGGN-IFTFFTQTME 448 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK----EGEGYDEILARLKYDGGIMTPDKF 538 +K++ L +R A++Q +L L+ Q + + G++ ++ + +G I++P F Sbjct: 449 QNASKRLHLEGRLRKAIEQEELTLFYQAKISCEDSPKISGFEALVRWITPEGDIISPGDF 508 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + L V++ + +A S NL P +Q + + + Sbjct: 509 IPIAEETGLIIPLGSWVIDRTCRDIAHLQALGFPPVVVSANLSPRQFVQDGLLQVVQQAL 568 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 ++ I P + LEITE + + + ++ L G IA+DDFGTGY++ LKR Sbjct: 569 VQHGIDPCWLELEITESSVMGSVDQATELLKSLVALGVHIALDDFGTGYSSLAYLKRFPF 628 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +K+D FV+ + + D I+++I LA+ L VVAE VE + Q+ + + G +Q Sbjct: 629 HTLKVDRAFVQTVEKDRADQAILQAIVSLARNLELQVVAEGVENEGQRDFITQAGCHSIQ 688 Query: 718 GYLIGRPQPLAD 729 G+ +P PL++ Sbjct: 689 GFYYSKPLPLSE 700 >UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q7Q8_SULNB Length = 656 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 117/628 (18%), Positives = 238/628 (37%), Gaps = 32/628 (5%) Query: 128 LGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT 187 L+ +++ +K TFF + + L ++ Sbjct: 25 FSLLNSAIAVILIFISFLTISMIVKEETFFASF-----LCVYIFLSIGLVYLLRKSKDNY 79 Query: 188 RMIVSPHFAQILWRRDIAPSL--GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 ++++ L A S+ + +R + S L ++ + Sbjct: 80 QIVIPVFTIISLILLLTAISIFPNEHERVAWFLVIIIFSFFLGGRQLGVAMTLMSIVGII 139 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL-AVLISFSVC 304 +G+ + + + ++ + Y + + Y L L + Sbjct: 140 SIDYFVDMGLSFYSLMLIIVIILIGSVLVDLYEKRDKTAKKRLYKLNNSLELRIKEEIEK 199 Query: 305 LLYMVR----IYHR----SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + + + + A D LT LPN Sbjct: 200 RILIYEKSNLDLKESSKKLKQQKDAYKKLAYYDILTKLPNRVLFYDRLKHSIDKSKRNNT 259 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +DN + ++ G + + ++ + L +++++ L +L G E L+L Sbjct: 260 KLAVLFLDLDNFKEINDSLGHHVGDNVLKILATRLQKRLRKSDTLARLGGDEFTLLLEDL 319 Query: 409 ETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E + + + S+ I L + + + + + LL + Sbjct: 320 EDLSNIGEISQSLIQVISKPIKIKEHTLYVTVSLGISIYPDDGQDTESLLKCADAAMYSA 379 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 L ++ ++ + +++ +IR ALD + ++Y QP+ + + G + + Sbjct: 380 KNEGCNL-FHFYKQEMTVKALERITFETSIRHALDNDEFIVYYQPLIDIRTNQLIGLEAL 438 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMP 581 L + G+++PDKF+ + ++ + +VLE + L P R +VNL Sbjct: 439 LRWQHSEKGLLSPDKFIHIAETSSIIIQIGERVLEDVAAQLEIWHEKGFNPERIAVNLSV 498 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + I + ++ P+ + LEITE ++ + Q+ G + IDD Sbjct: 499 KQLRHHGLISIISDILEKTKFRPKWLELEITESYTMQKPVQAIRLLNQIKDLGVDLTIDD 558 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK++ + +KID F+KDI N D +V +I +AK+ +L VVAE VET Sbjct: 559 FGTGYSSLSYLKKIPVNKLKIDRAFIKDITENKDDKALVSAILSMAKSMNLDVVAEGVET 618 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q+ L LG +QGYL +P ++D Sbjct: 619 EEQRQCLEALGCYKIQGYLFSKPMSVSD 646 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 619 bits (1598), Expect = e-176, Method: Composition-based stats. Identities = 88/539 (16%), Positives = 179/539 (33%), Gaps = 24/539 (4%) Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 + L +V++ A + F V +L + Sbjct: 3 DIQALLNGLLDSINDAVIIADGDGNPLRSNPAFETLMGFTSKGGAEVSRLAAGMIYRAIN 62 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQ 325 E A + + L +VR E Sbjct: 63 PGAGGRWRGLVT--CPDGRERPFEVTAAAINPSTDSADRYLCVVRPAIAEEAGAAGGSF- 119 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 D LT LPN A + + +D ++ G + Sbjct: 120 -GYDTLTGLPNRDLFGDRIGQAVLQANRTGASVALMTMGLDRFTLVNDALGHGAGDRLLM 178 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLD 434 + R L ++E + +L G + LV++ + + + + Sbjct: 179 EVARRLKMCVRETDTAVRLDGDKFALVMA-IADTDDSVIVAEKALNAVKEPFALDGQEVV 237 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + + + ++ L+ + + ++ + ++ L Sbjct: 238 VTFSIGISVYPLDADSSAQLVKHAENALHYAKVSGRNQ-YQFFSKDMNRKAKSRLELEGR 296 Query: 495 IRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL + +++ QP + G + ++ + + G++ P +F+P+ + Sbjct: 297 MRRALANQEFVVFYQPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQIEPI 356 Query: 552 DLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + SVN+ ++ + + + P+ + LE Sbjct: 357 GTWVLRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLELE 416 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE ++ ++++ ++ L G ++IDDFGTGY++ L R +KID F+ D+ Sbjct: 417 ITESMLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADV 476 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 TN A I R+I L++ +L VVAE E + L G +QG+ RP P + Sbjct: 477 DTNPKTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADE 535 >UniRef50_B5W2K6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5W2K6_SPIMA Length = 612 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 91/523 (17%), Positives = 187/523 (35%), Gaps = 26/523 (4%) Query: 228 LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 ++ + GY G R + + + + Sbjct: 72 AIVFVNKAFTRMTGYGPTEAIGRTPRILQGEKTDRTILERMKLDLKDGGVFYGQTINYRK 131 Query: 285 VETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 +E+ + + + L + R + + R +A D LT L N Sbjct: 132 DGSEFVNEWHIEPIYNDRQQITHYLAIQRDVTERQNQHNRLIYEANHDSLTGLYNRGYFI 191 Query: 342 QAPE---------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + Q+ + +D + ++ +G + I L ++ + Sbjct: 192 TELQKAIDRTQNCQDYLFGLLFMDVDRFKLINDSFGHQAGDQLLIEIGDRLQSCIRPQDI 251 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGL--DMGYGAAWGRFDGN 447 L + G E +++ + + + N + + I L Sbjct: 252 LSRWGGDEFAIIIDDIQDLSEISQLTNKIQQTIKKPIILGEDHLETVTSLSIGIALSSMG 311 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 +L ++ + + + + +Q+ L +R AL + +LLL Sbjct: 312 YNCSADMLRDADTALYRAKDRGKG-SYAIFTQAMHHRVRQQLQLETDLRYALKREELLLN 370 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + G + +L G+++P++F+P+ + L + V+E Sbjct: 371 YQPIISMKTNRIVGCEVLLRWEHGTLGLISPEQFIPMAEETGLIVKMGDWVIEQACIQAK 430 Query: 565 THPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 C P SVNL L+ + I +I + + SP+ + E+TE + E Sbjct: 431 QWECIYQDAPPFLSVNLSTKQLINQGIVEKIKEILEATKCSPELIRFELTETAIAESTEV 490 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ + ++ G R+ IDDFGTG+++ RL D +KID F++ + + I + Sbjct: 491 AVTTLRKIKDLGIRLCIDDFGTGHSSLSRLSCFPIDTLKIDRSFIQGMSASEHQTKIAYA 550 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I LA++ + +AE +E +Q L G + QG+L+ +P Sbjct: 551 IVKLAQSLGMETIAEGIENLEQFCQLKSWGCELAQGFLMAQPI 593 >UniRef50_A1K633 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K633_AZOSB Length = 790 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 114/676 (16%), Positives = 222/676 (32%), Gaps = 35/676 (5%) Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 + + + A L + + + +F + Sbjct: 110 GVGEISARLDAVLEGIDASLQRGDTTAATLVRHVDEVAVLRSDLQRLNDAVFQRSMQQAS 169 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 + ++ +GS + + FG + L+++ R + Sbjct: 170 AQRAALDRLGSTSTAMIVLLGAFG--------LGLVAMLLRQQGSIKALEERDRELRRGE 221 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 Q R + + + + + Sbjct: 222 AVQRELRERLEKIADNVPGVIYQFRCCPDGHIEFPYASRGLHTMFGITPEVAARDGSAVL 281 Query: 255 VGKLRYPFL----NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV--LISFSVCLLYM 308 + + TL + ++ + Sbjct: 282 AAIHPDDREVVAGAIRRSAETLQPWVCEYRIERAGGGYRWMSVFATPQRERDGATLWHGH 341 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNL 360 + A DPLT LPN R L + + +DN Sbjct: 342 CHDVSSYKAAEDEIRHLAFYDPLTGLPNRRLLMDRLRHALATHARSRHHGALLFIDLDNF 401 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRLQ 415 + ++ G +R + L ++E + + +L G E +++L + + + Sbjct: 402 KTLNDTQGHQYGDMLLRQVAARLSACVREADTVARLGGDEFVVMLEDLDRDKGAAARQAE 461 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + FD + LL + Q+ Sbjct: 462 SAGEKILAALNDAYQLDGREAHSTPSIGITLFDAADAEIAELLKRADLAMYQAKEAGRN- 520 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDG 530 L + ++ L + +R +L QG+ L QP + G + ++ + Sbjct: 521 TLRFFDPVMQATVDAHSALESELRRSLRQGNFALLFQPQLDRDGRMTGAEALVRWHHPEQ 580 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKN 588 G+++P F+PL + L VLE+ LA + +VN+ Sbjct: 581 GLVSPAAFIPLAERTGLILPLGRWVLENACDKLAEWAADPETAHLTLAVNVSVREFRHPG 640 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++ R+ +R ++P + LE+TE + E ++ +++L + G ++DDFGTGY++ Sbjct: 641 FCDQVERVLQRTGVAPGRLKLELTESLLLEDVEDAIERMDRLKRLGVGFSLDDFGTGYSS 700 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL D +KID FV+D++T+ DA+I R+I L ++ L V+AE VET +Q L Sbjct: 701 LAYLKRLPLDQLKIDRSFVRDVMTDPNDAIIARTIIALGQSLGLDVLAEGVETAEQHDFL 760 Query: 709 HKLGVQYLQGYLIGRP 724 + G Q QGYL GRP Sbjct: 761 LRHGCQSFQGYLFGRP 776 >UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH Length = 816 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 92/622 (14%), Positives = 202/622 (32%), Gaps = 60/622 (9%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLS-LFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + P+ ++ + D + VD+ + A + S + Sbjct: 201 FRAAVNGTAPIHLTLGYLGPDQLRGWVDIHADHVAATDHQGRRITGVIHDATSRCNQEDK 260 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLG 254 R+ + AA ++++ ++ + Y Sbjct: 261 LRQAN-----------VVFETAAEGIIIMDGQRQIISVNPAFSSMTQYEEAEIVGKSPEA 309 Query: 255 VGKLRYP--FLNLTWAVSTLCL-LNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYM 308 + R + + L+ ++ ++ + + + Sbjct: 310 IMHPRRHTDIDYPWHTLLPGSHAWHGEMMCLRKDGGYFTSWQHVSAVHDSRHNTTNYVIA 369 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL---------EQAPEQEAGKSFCCLRIDN 359 + + A DPLT L N L + + +D Sbjct: 370 FSDISAIRKAEAQLNHLAYHDPLTELGNRNLLQERLELELKTAQLNH-QQLALLFIDLDG 428 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G ++ + + +++ N+ +L G E L+++ E L+ + Sbjct: 429 FKLINDTLGHRAGDELLKLLAERIRRVLRHNDVAARLGGDEFLVLIPFFERPQELERLAE 488 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + + + + + + + + L+ ++ Sbjct: 489 QLLACLREPVELGHERVAVSASIGIALYPEHATSPDTLVSAADSAMYEAKNRGRN-GYLF 547 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIM 533 ++ QT +++ + + A++Q L + QP + + G + +L G++ Sbjct: 548 YTPDMTEQTRERMSMEQGLFKAIEQHQLCVLYQPMTELASNRMSGLEALLRWQHPSEGMI 607 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGR 592 P +F+P+ + L + V+ + + R S+N+ + R Sbjct: 608 GPTRFIPVAEECGLIEQIGEWVMRTACQQGQAWLAAGLAVPRLSINVSVREMRSAGYVER 667 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + P+ + +E+TE + S+ +L G +IAIDDFGTG Sbjct: 668 VAAILAETGFPPEKLEIEVTES-IIQRVDQSLQLFRRLKALGVQIAIDDFGTG------- 719 Query: 653 KRL---------QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 D IKID FV+ + + + R+I +LA + + V AE +ETQ Sbjct: 720 --FSSLSLLKSLPIDRIKIDRTFVQALPDDKHSRELCRTIINLADSLGMMVTAEGIETQA 777 Query: 704 QQALLHKLGVQYLQGYLIGRPQ 725 Q+ L L Q QGYL P Sbjct: 778 QRQFLQSLHCQEGQGYLFSHPL 799 Score = 43.8 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 28/123 (22%), Gaps = 13/123 (10%) Query: 214 AFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFIIFT-LGVGKLRYPFLNLTW 267 L LA + + + G + + V L L Sbjct: 23 LQQLFELAPFGIGVFDRHFRCRSVNQTLADLNGLSREEHYGRYLREIVPTLAPVLEPLFQ 82 Query: 268 AVSTLCLLNYNQNF----LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNR 320 + + + N + I + ++ +L +VR + Sbjct: 83 QIISSGVPRVELNLSGHTAAHQGRQRHWQAIYSPMLDEQGVPDRILTIVRDVTEQVEAQQ 142 Query: 321 RWH 323 R Sbjct: 143 RLQ 145 >UniRef50_C7R9T3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9T3_KANKD Length = 810 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 105/555 (18%), Positives = 201/555 (36%), Gaps = 32/555 (5%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVG 256 + K+K TL + +L+ + GY Sbjct: 242 KTEQALRRKDKYYRTLVENSYDCILMYDRNMNVTYISPSVTRVTGYTEEDLIGKTLEMFI 301 Query: 257 KLRYPFLNLTW----AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMVR 310 A + L + + L + + Sbjct: 302 FEEDREEAEANLRYVAENPGALSVVERRINHKDGHILWIESRLVNHLGDPDIQGVTVNFH 361 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEF 362 + + ++ H A DPLT LPN L + + E+ + + +D + Sbjct: 362 VITERKQAEQKIHNLANYDPLTQLPNRYLLRKRLLKGLADSVKNESKLALMYIDLDRFKE 421 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + ++++ +T+ ++ ++ L ++ G E +VL +E +++ + Sbjct: 422 INDTLGHSVGDALLQTVAKTIHKCLRSSDTLARVGGDEFTIVLPE-TSEKEARYIAERIL 480 Query: 423 SR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + ++ + G F + + + L + E Sbjct: 481 QQFRTPFKADSHTVQTGASIGISIFPDHSKKAEDLFRFADIAMYSAKKE-RNQ-YQLYEL 538 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 S + ++ + ++TA+ L LY QP + + + + D G ++P Sbjct: 539 RHSERENRRRSVEKKLKTAIANDHLRLYYQPRVDIKSGAIKSVEALCRWYDPDHGDISPS 598 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + L QV + K L + ++NL L N+ + Sbjct: 599 VFIPIAEESTLVHELSQQVTDLACKQLVSWRNMGIDTTVALNLSIKDLRNFNLLNQFADT 658 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + Y I A+ +EITE A ++ +++ + Q G +++IDDFG GY++ L +L Sbjct: 659 MRTYDIPGSALEVEITESAAMTDVVNTVKVLNQFKDLGIKLSIDDFGKGYSSLAYLSQLP 718 Query: 657 ADIIKIDGVFVKDIVTNTLDAM----IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 D +KID FV + + D M I+RSI LA++ L V E VET QQ ++L LG Sbjct: 719 VDNLKIDMYFVSQLSSQKQDRMINVNIIRSIISLAQSLDLHTVGEGVETIQQMSILQSLG 778 Query: 713 VQYLQGYLIGRPQPL 727 QG L RP Sbjct: 779 CDMGQGMLFCRPMSA 793 >UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B535_SULD5 Length = 1196 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 99/566 (17%), Positives = 214/566 (37%), Gaps = 30/566 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLV 244 ++ + K + + + + L + Y Sbjct: 623 LLLLNQTIQEQLDIKKEQEEKLEIFAKIFSNTIEGIAITNLEGIVLQINDAFSAMTHYAP 682 Query: 245 PVFFIIFTLGVGKLRYP---FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + ++P + + V + + T Y I+ +++ Sbjct: 683 HEVLGQDIRLLRSYKHPDSLYKEIWDTVFSNTAWQGELWNKRKDGTLYPALLIIHPILNR 742 Query: 302 SVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGK 350 + +++ + + H QA DPLT L N + Sbjct: 743 EGHISYIVFIQHDISVLKHNEEKLHQQAYYDPLTKLANRTLAYDRLQHAITNAKSRRRLV 802 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 S L +D + ++ G + + + + + L +++ + +L G E L++L Sbjct: 803 SVLFLDLDKFKNINDTLGHDIGDLLLIEVAKRIQALCSQSDTVCRLGGDEFLVILEDITH 862 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + S+ + + + + +T++ LL +S Sbjct: 863 YETAISVAKGIIAALSQPFYLEGRTISTSTSIGITYYPNDGDTMKTLLKNADIAMYRSKT 922 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILA 524 + + + +S + V L ++ A+++ + ++ QPI + + G + ++ Sbjct: 923 NGRG-SYEIFTTALSDFIKESVKLEERLKKAVEKHEFFMHYQPIYDLQKKEIIGLEALMR 981 Query: 525 RLKYDGGIMT-PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPL 582 G+ PD FL ++ + + A + S+ ++ + S+N+ P+ Sbjct: 982 WN--YKGVTYFPDTFLSVMEETKMIAEASSNLFISVFHFIKKLNEALGRELFVSINISPV 1039 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 +I + + Q V LE+TE N E + L +GF IA+DDF Sbjct: 1040 QFSVAPFQESLIHALEASTLRAQLVCLEVTESLFLENIEEVSQKLAALKTYGFCIALDDF 1099 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 G+GY++ + LK L + +K+D +FV+D+ + D I +S+ L K +++V+ E VET+ Sbjct: 1100 GSGYSSLQYLKVLPLNKLKLDRIFVQDLPDSQSDIAITQSVLALGKNFNVNVIVEGVETE 1159 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q L ++G +Y+QGYLI +P P Sbjct: 1160 EQCKFLEQIGCRYIQGYLISKPMPEE 1185 >UniRef50_B1WWM4 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=B1WWM4_CYAA5 Length = 967 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 108/674 (16%), Positives = 224/674 (33%), Gaps = 48/674 (7%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV-----GSFFDFPLKIST 155 +++ TR +T W+ L I + + + Sbjct: 277 LGLIQTANYTRIGLLITVITALALTLWVSLWLGKTIVQPLTQLTDVSEHIAKGSLEETLN 336 Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL-WRRDIAPSLGKEKRA 214 F + L + + R A+ + + Sbjct: 337 FSASNEFGIVATALNKMLIQLRETLADLEDRVRERTQALEAKTESLEITLKKLRFSQANY 396 Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 L V++ +A + + + +TL Sbjct: 397 HQLINNLQAGVIIYDPRGNMMMANLAASELLDISSESLSLYSSPEARVTFVDESGATLPP 456 Query: 275 LNYNQN----------------FLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRS 315 + Q ++ ++ Sbjct: 457 QEHPCQQVLTTQVPLHNYVMGIHRQRPLDSIWTLVNAFPAFDDQNHLTQVVVLLLDITDR 516 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRH 366 + + +AL D LT LPN L + + + + +D + ++ Sbjct: 517 KLAEEQLRYRALHDALTGLPNRTLLTERLDHAIQRVKRYPDSLFAVLFIDLDRFKVINDS 576 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NS 423 G ++ + I TL ++ ++ + +L G E +++L + + ++ + Sbjct: 577 LGHLVGDQLLIYIANTLKRHVRSSDTVARLGGDEFVILLENLTSPHEVVQVIERIEKDIK 636 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA-LDSREEMVS 482 + I N L T + +L ++ + L + + Sbjct: 637 KPIQLMNKTLFTSASIGIALSSPEYGTGEDILRDADNAMYRAK--GNNLTSYELFNVEMR 694 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + L ++R AL+Q +L+ QPI + E G++ ++ + + G+++P KF+ Sbjct: 695 QTMLEVFELETSLRQALEQQQFILHYQPIVSATSLELLGFEALVRWVHPEKGLISPGKFI 754 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRL 596 PL + L + + +A D + + S+N+ +I ++ Sbjct: 755 PLAEETGLIIPLSEWIFQEACSQMAQWCADFRMASSLKMSINIAAYHFQSPQFLEKIDQI 814 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + + LEITE N + + + QL + I++DDFGTGY++ LKR Sbjct: 815 LTETQLLGKNLKLEITESLLIKNTDRFLSLVPQLQQRQIEISLDDFGTGYSSLNYLKRFP 874 Query: 657 ADIIKIDGVFVKDIV--TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 + +KID FV + N D I+ +I +A++ + VVAE VET +Q+ L +LG + Sbjct: 875 INTLKIDKSFVDGLDYQKNQADVSIIEAIIHIAQSLGMDVVAEGVETDRQRQQLQQLGCE 934 Query: 715 YLQGYLIGRPQPLA 728 +QGYL+ P Sbjct: 935 AIQGYLMSPPLTSE 948 >UniRef50_A4TXR0 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXR0_9PROT Length = 823 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 111/650 (17%), Positives = 219/650 (33%), Gaps = 26/650 (4%) Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 L + + ++ + L + + Sbjct: 157 LAAMILHTAPEAMLVIDADDKVIRANAHAAALFGHGPEALLGKPLPILVPDLPADAGETV 216 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 D S V + + F + +VS + A S + + Sbjct: 217 GLRRDGGSFPIQVRVGALHFGDESYRVVSI-QDLTARKVAEAESRLHGEIFTHAQEGVLV 275 Query: 224 SV-LLLLLCTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 + +L + GY + F + ++ + + Sbjct: 276 TDTSGTILSANPAFCRMTGYELDELVGSPSGFLRSGRHPDDFYGDMWEVLHRDGHWSGEI 335 Query: 280 NFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + ++ + + + + A D LT LPN Sbjct: 336 CNRRRDGDVIPQWVSISAVRDANGSVGNYVGVYMDISALKRHEEALRHMAHHDALTGLPN 395 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L + + +D + ++ G + + R LL + Sbjct: 396 RLLLADRLDVALAKARRTGKMVAVAYVDLDGFKPVNDRLGHHVGDSVLIQAGRRLLDSVA 455 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW--NNTGLDMGYGAAWGR 443 ++ + +L G E +LV+ + + + + ++ + + + + ++ + + Sbjct: 456 ADDTVARLGGDEYVLVMQDMDDDQQCRQRLSQVLTAMAEPMRFLDEDSAISITASIGAAL 515 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + LL Q+ L + + Q T + + ++R AL+ G Sbjct: 516 YPNDDSDPDTLLRHADRAMYQAKQEGRNR-LAMFDPQLDLQGTLRRNTMKSVRLALEDGQ 574 Query: 504 LLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 +L+ QP N G + ++ L + G++ P +FLPLI +L V S L Sbjct: 575 FVLFYQPKVNMRLGTVVGAEALIRWLHPERGLLPPAEFLPLIEDDSLDLAIGEWVTRSSL 634 Query: 561 KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSN 619 +A SVN+ LL + AGR+ + + + P+ + LE+ E A + Sbjct: 635 AQMAAWKRAGAVIPVSVNVAASHLLSNDFAGRLEEILAEFPDVPPRMLQLEVVETAALED 694 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + +E G +A+DDFGTGY++ L+ L D +KID FV ++ + D I Sbjct: 695 IGRAREVLEACRALGVSVALDDFGTGYSSLTYLRHLPIDTLKIDRSFVLNLPDDMDDLTI 754 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VR + LA V+AE +E + +L +LG + QGY I P P D Sbjct: 755 VRGVIVLAAGFGRDVLAEGIEKTEHGDMLLELGCELGQGYRIAPPMPAGD 804 >UniRef50_Q5P4J2 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4J2_AZOSE Length = 948 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 110/621 (17%), Positives = 207/621 (33%), Gaps = 23/621 (3%) Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 LV P +GS P S F ++ + T I L ++ Sbjct: 316 VPALVHPRLDIGRAIGLGSLVLLPPLASGFVLARTQLWIP---PAAATIGFIIGYLGWFA 372 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW--LAALSVLLLLLCTPYENDFIAGYLV 244 + S + + A T+ L + T + Sbjct: 373 VDLRRSRRGLRHARQDADATLRSIADAVVTVDDDCRIVLMNPVAERLTGLPLAGAQQRRL 432 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 FT ++ + L T +L ++ + + Sbjct: 433 GELLDTFTEQRAQIDETLGVCLQQRRMIRLPEPIAW-RMPDGTVCALRLTISPIGERAEG 491 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLR 356 + + R +A D LT LPN L + + Sbjct: 492 AVLAFNDVTEALAATSRLEHEATHDTLTGLPNRALLLDRLHHALAQADRRCTMIALLFVD 551 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + + L ++ + + + G E ++++ + + + Sbjct: 552 LDRFKRINDSLGHHAGDRVLEIVAERLTAAVRGGDTVARWGGDEFVVLMENLDDQPAVAA 611 Query: 417 MVNI---LNSRQIHWN-NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + L R + T L + G + LL ++ Sbjct: 612 IAHKMIELLERDVEAEPGTNLALSCSIGIGVGPRDSADAGTLLLMADRAMYRAKRQGGG- 670 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + ++ + ++ + + +R AL + L+ QP + G + ++ + D Sbjct: 671 SYTFYSPEMNTWSRDRLKMESALRAALQNREFELHYQPQIDIRSGRLVGLEALIRWRRAD 730 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G ++ PD F+P + L V+ A + +VN+ N Sbjct: 731 GELIRPDAFIPAAEESGLIRGIGDWVIREATSQAARWKSEGLLPVPLAVNVSAQQCSDMN 790 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + ++P + +E+TE A +AE + + + G +A+DDFGTGY++ Sbjct: 791 VVDTIRSALEDSGVAPAMLKIELTESTAMHDAERVAELLSSIDRLGVGVAVDDFGTGYSS 850 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR +KID FV DI ++ DA IVR LA + ++VVAE VETQ Q L Sbjct: 851 LSLLKRFPISELKIDKSFVHDITSDADDAAIVRGTIALAHSLGMTVVAEGVETQAQLRFL 910 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + QG L P P + Sbjct: 911 ARHRCNIAQGLLSSPPLPADE 931 >UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M823_METRJ Length = 785 Score = 618 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 111/735 (15%), Positives = 242/735 (32%), Gaps = 25/735 (3%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFI-F 59 ++ + ++T F + + I S+ + + + L + L+ LF + Sbjct: 50 LAGTAVVAGLGVWTTHFVAMLGYRPDMVLGFDDTTTIFSALVAILVVGLPLALARLFPSW 109 Query: 60 GWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSR 119 R + G + + + V+ A GL R Sbjct: 110 RIRTLAGAAAGFGIGAMHHAGM---AALEGCQQTHSPVMNVLAAGIGACSLALVCGLPRR 166 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 + + + + G+ + + + + + + Sbjct: 167 LATPWVVCALFTLAVTGTHFVAIAGTTLVPIQGYRGLPNENIVLSILTTGGAAVLFLGAF 226 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 + + + R + + + L + + + Sbjct: 227 LTILAARRFDAQERAHS-SILRTALDNMSNGLLYLDPAERVRLYNRRYLEIYHIPVDVDL 285 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 G + + G V + ++ +E L + + Sbjct: 286 TGMTIDQIIDLVGYRHGWTAERREAARRRVDDWRSVKNSKQIDYPLEDGRVLQVEIRPIE 345 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE----AGKSFCCL 355 + + RR A DPLT L N RAL E + + Sbjct: 346 D--GGNVVTFDDVTKEREAQRRIAELAFCDPLTKLANRRALSARLEHDFTPKRVVKLLLI 403 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ YG ++ + + L + + + +L G E+ +++ G + + Sbjct: 404 DLDRFKQVNDTYGHVVGDQLLIQVANRLRTIAGPDGFVARLGGDEMAVLVYG--DQTQAM 461 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + ++ + +G + + L+ +S Sbjct: 462 AVATAVIEALALPYGIDDLTVSIGCSIGL-CCTDDAQDAIELMQFSDIALYESKRQGRGR 520 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYD 529 + +V L +R A+++G++ L QP+ + GY+ ++ Sbjct: 521 TSC-YTPDMLRTVADRVQLETDMRAAIERGEMYLAFQPVIALVDDRIIGYEALIRWDHPK 579 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G ++P +F+PL + VL+ + A P +VN+ P+ + Sbjct: 580 LGAVSPARFIPLAEETGQIIPIGAWVLQEACRQAARLPN---DVYVAVNVSPVQFRSPQL 636 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + + R + + + +E+TE + + + + G +A+DDFGTGY++ Sbjct: 637 LSDLTQALARSGLPAERLEIELTETAIVEDGPRIAKILAAIRRLGVTVAMDDFGTGYSSL 696 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+ D IK+D FV T+ +++ I +AKA + + AE VET Q AL+ Sbjct: 697 AHLRDFPLDRIKVDRSFVATAETDRHSLAVLKGIMHIAKALDVVLQAEGVETPSQLALMR 756 Query: 710 KLGVQYLQGYLIGRP 724 ++G +QGYLIGRP Sbjct: 757 EIGCDAIQGYLIGRP 771 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 98/437 (22%), Positives = 187/437 (42%), Gaps = 16/437 (3%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRID 358 + + + + D LT LPN ++ Q + + +D Sbjct: 268 ALQSEVASRQEVEQTLSHVITHDALTGLPNRSFFQEDLAQAILRAQRANKYLAVMLVDLD 327 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ + ++ + L++ + + G E +++L PE+ + + Sbjct: 328 QFKKINDTLTHSAGDQLVVALTKRFNTLLENEISIARAGGDEFMMLLENPESVDEVIAIA 387 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 N + + + N+ + + + + + L+ ++ A Sbjct: 388 NRIMACMKQPFTLNDEEVFITCSIGIAVYPEGGVSAEDLIRNADAALYRAKAAGRN-GYH 446 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGI 532 + + K++ L +R A+++ +L L QP N + G + +L + + G Sbjct: 447 FYTTGMHAEALKRLELDRWLREAIERNELSLAFQPKVNLKTRDYTGAEVLLRWYRPEQGF 506 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAG 591 ++P +F+PL + L + V+ + L+ R ++NL + L K + Sbjct: 507 ISPAEFIPLAEETGLIKELGMWVVRRACQQLSEWRGTPLSHIRLAINLSAIQLEDKELVH 566 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 +I L + + + P+ + E+TEE N ES+M ++ +L K GFR++IDDFG GY++ Sbjct: 567 KIDNLLREFDVPPRQLEFELTEEVFIQNIESNMAHLNELIKMGFRLSIDDFGVGYSSLAY 626 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK IKID FV + TN D +I+ ++ +A +LSVVAE VET+ Q A L K Sbjct: 627 LKHFPISCIKIDRSFVSQLETNADDRVIINAVIAMAHNLNLSVVAEGVETEAQAAYLQKQ 686 Query: 712 GVQYLQGYLIGRPQPLA 728 G QGYL +P P Sbjct: 687 GCDEAQGYLFAKPLPPD 703 >UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNA1_9PROT Length = 650 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 93/467 (19%), Positives = 189/467 (40%), Gaps = 27/467 (5%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR-----------WHLQALTDPLTLLPN 336 Y + ++ QA D LT LPN Sbjct: 174 IYYNLSSGRRYANNFKQIILEQHSVSEYIKKQEEMQNELLEQKDILEHQATHDALTGLPN 233 Query: 337 FRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 EQ + + + +D+ + ++ G + ++ + L +++ Sbjct: 234 RILFNDRLEQSIQKAKRNDTQIALFFIDLDHFKEINDSLGHHIGDEVLKVVATRLNLVIR 293 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 + L +L G E +++ + + + I NN L + F Sbjct: 294 LEDTLARLGGDEFTIIMEDIKNIQYVIFFSQKILKVLLEPISVNNQNLYLSSSIGISLFP 353 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + L LL ++ + + ++ ++V+++ +++ A+ + + + Sbjct: 354 QDSTDLNNLLKYADTAMYKAKSEGRN-NFQFYSKEMTELAFERVIMVASLKQAIIKKEFV 412 Query: 506 LYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 ++ QP + + G + ++ G+++P KF+PL L D+ V+E + Sbjct: 413 VHYQPQIDAKNKKLVGMEALVRWEHPTLGLVSPAKFIPLAEDTGLIVDIDILVMEIAMMQ 472 Query: 563 LATHPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 ++ D P S+NL L + +Y + + LEITE + Sbjct: 473 VSEWRRDGLNPGILSLNLAIKQLNHDTFIIILKHNMSKYDFKSEWLELEITENDVMRKPK 532 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + ++++ + G +IAIDDFGTGY++ LK+L D +KID F++DI + D IV+ Sbjct: 533 DAAVKLKEISELGIKIAIDDFGTGYSSLSYLKKLPIDKLKIDQSFIRDIPGSEDDNAIVK 592 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ ++K+ +L V+AE VET++Q+ + + G +QGY RP P Sbjct: 593 AVIAISKSLNLDVIAEGVETKEQRDFVLENGCSKIQGYYYSRPLPAE 639 >UniRef50_B1HMM5 Sensory box/GGDEF family protein n=2 Tax=Bacillaceae RepID=B1HMM5_LYSSC Length = 573 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 97/559 (17%), Positives = 188/559 (33%), Gaps = 55/559 (9%) Query: 210 KEKRAFTLSWLAALSVLLLLLC-------TPYENDFIAGYLVPVFFIIF---TLGVGKLR 259 K + S+++ + I+ Y + Sbjct: 16 SLKELQDIFSAMNSSIIVAITDRTGKITFVNDHFCKISKYTREELVGQDHRLLNSGYHPK 75 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSE 316 F + + + N + Y + + + + + + Sbjct: 76 SFFREMWRTIGNGDMWNGEVCNRAKDGSLYWVKTTIFPFLDERGKPYQYIAIRVDITAQK 135 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + ++ A D LT LPN R LEQ + + ++ + ++ G Sbjct: 136 DI-KKITHIAYHDELTGLPNRRKLEQRLENEFHQSRRSGEKFALFFIDVNRFKHINDGLG 194 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 ++ + + L + + Y+ E +++L+ R++ M + + Sbjct: 195 HIIGDMFLVEMSNRLRNIDYTSNSFYRHNSDEFVMILNDVN---RIEEMAKEIIGVFNES 251 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 +N F + T++ LL + + + + Sbjct: 252 FVVDNYEFYASISIGISIFPDHANTVEELLKNADIAMYAAKST-RGNQYRLYRDNMDEAN 310 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 K +LL + AL L L+ QP + + G + +L + G + PD+F+P Sbjct: 311 DKWLLLETKLHQALKNDLLELHYQPKIDLKTDTIIGMEALLRWYDPELGHIPPDRFIPFA 370 Query: 543 AQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L + VL R +VN+ P+ + + + Sbjct: 371 EECGLINDIGVWVLGKASAQAKLWNESHNLRLRVAVNISPIHISTSGFVEMVKDVIAETG 430 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I PQ + +EITE E + I QL G I++DDFGTGY++ LK+ D++K Sbjct: 431 IDPQLLEIEITEMSMLDYTEDLINTINQLRALGITISLDDFGTGYSSLNYLKKFPVDVLK 490 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ-----------QALLHK 710 ID FV+DIV ++ ++ LA A +L Q +L + Sbjct: 491 IDRAFVRDIVPEKSGIAMISAMISLAHALNL-----------QVVAEGVEEEAELNVLRE 539 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G +Y+QGY +P + D Sbjct: 540 HGCEYVQGYYFSKPLSVED 558 >UniRef50_A4JQX8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JQX8_BURVG Length = 913 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 130/720 (18%), Positives = 237/720 (32%), Gaps = 20/720 (2%) Query: 24 LIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSF 83 L +S S I S + L+ + C +LS F+ +R + G Sbjct: 186 LRAMSDRASRNEAIEGSVLALSSLLTCALLSYAFVARYRARLERQRGRLVAAENERRFRQ 245 Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS-MYL 142 L F V + + + L + + Sbjct: 246 YFEHHPLPMLIFDVETLAIMAANVAAAAQYGYPVGELCRRDMASLYAQADMPAFLRDLQH 305 Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 + + + LS + + A++ R Sbjct: 306 LRTSGTGSGSAGICRHRRSDGRAMYVDLSYHFLTYTKRDACFITAIDVTERKNAELALRL 365 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP- 261 A ++ + I GY G+ + Sbjct: 366 RSRALDAIGNGVLITRVEAGEEIV---EYANPAFETITGYTSAQVVGRDHAGLARAGQQG 422 Query: 262 --FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 F + A++ + + + +A + + ++ Sbjct: 423 LLFEQMAQALAAGSAGARLLRSRRADGSAFWGQLYVAPVRDDLTYHICVISDLTELIDSR 482 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQE----AGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 + QA D LT LPN L + EQ + + +D L+ ++ G Sbjct: 483 DQLVRQARRDALTGLPNRATLRELIEQAVAERRAFALLFMDVDRLKDINDSLGHGAGDRL 542 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 +R + + L + E+ + + G E + +L P+ RL ++ + R + + Sbjct: 543 LREVAQRLSGCVGEDGTVTRYGGDEFVAMLGRPDDGDRLAALLRRIARALERPVQIGDAQ 602 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + + LL Q+ A ++ + + +++ L Sbjct: 603 SRVQLSIGVACYPADGLDAETLLKHADLAMYQAKARGRN-TVELFKPSFAEAAERRIALS 661 Query: 493 NTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 + +R AL+ L QP + G + +L + G ++P F+PL L Sbjct: 662 HRLRAALEHDGFELAYQPQIDVRTSRVSGVEALLRWHDAEMGTVSPAIFIPLAEDIGLIG 721 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 + VL S+ R SVN+ P L + + R+ + + L Sbjct: 722 QLGEWVLRSVCGQAKRWADTLPALRVSVNVSPRQLASGDFCSVVRRVLDASGLPAHQLEL 781 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE A ++ + L++ G IAIDDFGTGY++ L+ AD +KID FV+ Sbjct: 782 EITEGALV--APGALPALRALNEIGVLIAIDDFGTGYSSLSYLRTFHADRLKIDMSFVRG 839 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I T+ D I+R+I LA++ VVAE VE Q + L G +QGY R P A+ Sbjct: 840 IGTHCADEAIIRAILALARSLHFEVVAEGVERPDQLSFLVAEGCPIVQGYHFCRAVPAAE 899 >UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MED7_DIAST Length = 894 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 117/635 (18%), Positives = 209/635 (32%), Gaps = 31/635 (4%) Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 RL + L + + LL T V Sbjct: 247 QASARLSGKPAMVVARPLIYPDLWATVSLPRDAALAGWRQEAQTVLFGALLFAATVVAAG 306 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL--AALSVLLLLLCTPYEND 237 +++ YL RM + L L P+ Sbjct: 307 SVVALYLRRMHSARRVVARSKATLDQALEAMVSGFVLLDAQRCVVQWNLRFEEMFPWLVS 366 Query: 238 FIAG--YLVPVFFIIFTLGVGKLRYPFLNLT--WAVSTLCLLNYNQNFLQGVETEYSLAF 293 I V + + C L + Sbjct: 367 TIGEGVPFRRVLETTVHYHLPGASAEEKRAWVEERLQQQCTPRGGVEQLLPNGHYVQITE 426 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 ++ + A D LT LPN R L Sbjct: 427 RATA----DGGVVIIYHDVTDLRLATAEVEHLAFYDQLTGLPNRRLLLDQLGDASASAVR 482 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D+ + ++ G + + ++ + R L ++ + + +L G E +++L Sbjct: 483 TGTHGAVLFIDLDHFKTLNDTLGHEIGDYLLQQVARRLESGVRVGDIVARLGGDEFVVLL 542 Query: 406 SGPETE-----GRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +G TE +++ + L ++ F +T +L Q Sbjct: 543 AGLATEAERAREQVRAVAEKVVQLLAQPYPIAGQSYHGSCSVGAALFGSVLQTAAEVLKQ 602 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKE 515 Q A A+ + + + + L + ++ AL +G LL+ QP + Sbjct: 603 ADIAMYQVKAQ-RGNAVCFFDPRMQVALSARARLESDLQDALREGQFLLHLQPQFTRDGA 661 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGP 573 G + +L + G++ P +F+ + L VL S + LA + Sbjct: 662 VVGVEALLRWQHPERGLVLPAEFIGVAEDSELIVPLGRWVLASACELLARWQASPRLREL 721 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 SVN+ + ++ +L R + LE+TE + E S+ + QL Sbjct: 722 SLSVNVSARQFRSPDFVEQLSQLLLRSGAPAHRLELELTESLVLEDVEDSIAKMHQLRTK 781 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R A+DDFGTGY++ L RL +KID FV + + D ++V++I +A+ L Sbjct: 782 GVRFAVDDFGTGYSSLAYLTRLPLHRLKIDRTFVHHLGESRSDDVVVQTILGMARNLDLE 841 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET++Q++ L G QGYL+ P P+ Sbjct: 842 VVAEGVETEEQRSFLALHGCDVYQGYLLAHPMPVE 876 >UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative n=2 Tax=Cyanobacteria RepID=B0CC32_ACAM1 Length = 886 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 104/591 (17%), Positives = 208/591 (35%), Gaps = 34/591 (5%) Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQ-----ILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + A Y + I + Q + + P + + + S Sbjct: 281 GVVQATAAYLAKQAGGLQQINARRQIQFSIKGQRYFLQVTPLQDQHGLDWLSVLVIPESS 340 Query: 226 LLLLLCTPYENDFIAGYLVPVFFI-IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 + + + +L I + + P L + A + ++Q Sbjct: 341 FMAQIDANTRTTLLLCFLALGCAIYLGVCTASWIARPILRFSQASQAISSGQFDQTVAVK 400 Query: 285 VETEYSLAFIL---------AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 E + A L + + + ++ AL DPLT P Sbjct: 401 GFKEIGVLQQSFNRMAEKLQATFSDLEAANLALTKEVAERQRAEEQFKHLALHDPLTGFP 460 Query: 336 NFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N + E+ + + +D + ++ G + + +I L L Sbjct: 461 NRAFFMEQLERAVKQTQRHSQYLFAVLFIDLDRFKIVNDSLGHEVGDQLLGAIAHQLHSL 520 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGR 443 ++ + + +L G E +++L E + + + S I +N + + Sbjct: 521 VRATDIVARLGGDEFVILLEPIEEVNDAVRVADRIVQELSAPIDLSNRQVFISASVGIAL 580 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + +L ++ + E + Q ++ L N +R A+ Sbjct: 581 SSPDYSQATDILRDADIAMYRAKNRGKA-CFEIFNERMYTQALDRLQLENDLRQAIANQQ 639 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L ++ QPI N + G++ + G + P +F+P+ + L +L+S Sbjct: 640 LQVFYQPIVNIQTGKLSGFEALGRWPHPQRGFIPPTEFIPIAEETGLIIPLGEWILQSAC 699 Query: 561 KWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + +AT SVN+ L N+ ++ R ++ ++ + LE+TE Sbjct: 700 QQMATWLQTYPSAVKYTISVNMSIKQLKDPNLLTKVDRALEQSGLNRHQLSLELTESILM 759 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 N + QL + G +++IDDFGTGY++ L + IKID F+ I + Sbjct: 760 ENVIELKVILNQLKERGIQLSIDDFGTGYSSLSYLHLFPFNTIKIDQSFITRIGAQGENQ 819 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I+ +I +LA ++ ++E VE++QQ L KL Q QG +P Sbjct: 820 EIIETIINLASQLNMDAISEGVESKQQLNYLKKLLCQKAQGNYFSQPLSSD 870 >UniRef50_D2L6G6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6G6_9DELT Length = 814 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 99/441 (22%), Positives = 178/441 (40%), Gaps = 20/441 (4%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRI 357 +V + L + A DPLT LPN Q + L + Sbjct: 358 GLVSDITDRKHLENQLAHMAFHDPLTGLPNRSLCLDRIRQAIERSKRRENYQYAVIFLDL 417 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G M + + R L ++ + + +L G E +++L + + + Sbjct: 418 DRFKVINDSLGHHMGDRLLEGVSRRLRDCVRGLDTVARLGGDEFVVLLEETGSNREIIRI 477 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + S + + + + + LL + ++ Sbjct: 478 VKRIRTAISDIFVLCDHDIHVTCSMGIVISPALYDKPEELLRNANIALHRAKGEGRNR-F 536 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 + + + L N +R AL +G+ L QPI ++ G++ ++ + G Sbjct: 537 KVFNTRMLEDAIRLMDLENDLRLALKRGEFFLDYQPILALRDRRLTGFEALVRWRRPGKG 596 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKN 588 + +P +F+P+ L L VL + +A SVNL L Q Sbjct: 597 VASPMEFIPVAEDTGLIVPLGLWVLGEACQTMAAWQKRFPGAEHLSMSVNLSAKQLAQPT 656 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + R+ + + P+ + LEITE N E S+ +++L + G R+++DDFGTGY++ Sbjct: 657 MVEEVERILRATGLDPRTLKLEITESVIMDNPEVSILRLKRLKELGVRLSVDDFGTGYSS 716 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+R D +K+D FV DI + + IV ++ LA + L VVAE VE + Q +L Sbjct: 717 LSYLQRFPIDTLKVDRAFVSDIEAS-ENRKIVGAVVALAHSLGLDVVAEGVELETQSDVL 775 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + QG+L RP D Sbjct: 776 EGFNCEAGQGFLFSRPVCGED 796 >UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Chloroflexus RepID=B8G9I9_CHLAD Length = 1101 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 125/681 (18%), Positives = 227/681 (33%), Gaps = 46/681 (6%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 T L ++ G T V + R+ L + W+ L Sbjct: 427 LTGYATNELIGRSLRILHGPATDSVTLNRLWEAMERQQPARFALLYYTRAGKPIWVDLSL 486 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 Y + F A F D ++ +L + + L R++ Sbjct: 487 --SPVTDEYGKATHFIAL--HRDISAQKLAAFLEHDRSAILALLLQHAPVTAMLNRLVTL 542 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 +R L W + G + Sbjct: 543 IER----------------QRPNWLVWAELDGHPAAASKPLAGEADLIGPRLRQMIARHN 586 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY----- 307 + + L + + L ++ +S S +L Sbjct: 587 Q-KAPIVLDLHTHWDQLRHLSVSSGWIWPLAKAHGALAIFHQQTDWVSESDQMLLRVATE 645 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + + LN + + Q D LT LPN L++ E+ + + +D Sbjct: 646 LFNLIADHANLNAQLNYQVRYDTLTGLPNRNLLQERIDLALRDARERRHIVALLFIDLDG 705 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + ++ + + + + L ++ G E LL++ Sbjct: 706 FKQVNDSLGHPIGDRFLKHVSQAFAACARPQDTLGRMGGDEFLLLMPDLPDARLADIAAQ 765 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + L + F + + LL ++ Sbjct: 766 RLLDALQTPFLHDGHELRLTASIGISLFPRDGVDVVTLLKNADSAMHRAKELKR-SGFLH 824 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIM 533 S + ++ L +R AL++ +L +Y QP + G + ++ G + Sbjct: 825 YRPEHSRRAHTRLALEAQLRRALERHELAVYYQPQYDLVSEGITGVEALVRWHHPQRGPI 884 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGR 592 P +F+P+ + +L VL + R SVN+ LL+ Sbjct: 885 APGEFVPIAEESDLIIEIGSWVLREACRQAMAWQQAGYPLLRISVNVSARQLLRPEFVAE 944 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + Q + LEITE + + I+QL G RIA+DDFGTGY++ L Sbjct: 945 VAAVLHATGLPAQYLELEITEGVMLDDPIYAARQIDQLRHMGVRIALDDFGTGYSSLAYL 1004 Query: 653 KRLQADIIKIDGVFVKDIVTNT----LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 ++L+ D +KID FV+ I ++R+I +LA + L+VVAE VET +Q+A L Sbjct: 1005 RQLRLDALKIDQAFVRAIDEQQNVVTNSRALLRAIINLAHSLGLAVVAEGVETDEQRAAL 1064 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +G LQGYLI +P P + Sbjct: 1065 LSMGCDVLQGYLISQPLPADE 1085 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 11/142 (7%), Positives = 26/142 (18%), Gaps = 11/142 (7%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL--AALSVLLLLLCTPYENDFIAGYLVPV 246 + A+ + + + + I G + Sbjct: 256 DVTDRVEAERQLNLRARVLSQINEAVIVTDRSGAIIYLNEMAAYLYAVQPEAIIGQPLSR 315 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SV 303 F L ++ + + + L + Sbjct: 316 LFTAEPLPYQPVQPSVQSF------STGWRGELIHRLPDGRAMMVEVRIDPLYHDELANG 369 Query: 304 CLLYMVRIYHRSEWLNRRWHLQ 325 L +VR + R L Sbjct: 370 GALIVVRDITARKQAEERLRLL 391 Score = 46.5 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 37/143 (25%), Gaps = 11/143 (7%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAG---YLVPV 246 E R L LA L +++ ++ I G PV Sbjct: 130 DVTALLAADYALRNNEFRYRQLLELAPLLIIISTLPEGIIRYCNPAGARIFGVDDPAEPV 189 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVLIS-FSVC 304 + G+ A+ LL + + + ++ + Sbjct: 190 NQPLTEFLSGEDHDLMRKRRQALRNGQLLQPARYHIYARDQIVRVIEVQGTLIEGPGEIQ 249 Query: 305 LLYMVRIYHRSEWLNRRWHLQAL 327 +L + R+ +L+A Sbjct: 250 VLTIGYDVTDRVEAERQLNLRAR 272 >UniRef50_A5IAE9 Sensory box protein, GGDEF family protein, LssE n=5 Tax=Legionella pneumophila RepID=A5IAE9_LEGPC Length = 741 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 103/591 (17%), Positives = 203/591 (34%), Gaps = 33/591 (5%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 V + + L + T+ + R ++ +L Sbjct: 145 VIAVRQLASALTQKWVLARETQKHTEFLNQLVEER--TESLQQSFSLLRATIESSSDGIL 202 Query: 227 LLLL---CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 ++ L Y + F+ + +P I +L + Sbjct: 203 VVDLQGKIVDYNSQFVKLWNIPESIIKKETSEPQLIQYMSTQLLNSEQHAQHVKEFSIHI 262 Query: 284 ----------GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 + +V ++ R L + QA D LT Sbjct: 263 DDSSMQIYHFRNGKVVECCSKPHRVGLQTVGRVWSFRDITEQTRLKEKLEYQATHDALTN 322 Query: 334 LPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN L + + +D + ++ + ++ L Sbjct: 323 LPNRLLLIDRIEHAISGYARHKMKFAILFFDLDRFKMINDSLSHEAGDQLLCAVAERLRS 382 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWG 442 L+++ + L +L G E +++ +E ++ + + + H +++ Sbjct: 383 LVRKEDTLARLGGDEFVMLFQSFNSEEQIAGVAQKILKSFQKPFHIAERDINIHVSIGIS 442 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + +T+ LL Q+ E ++ +T +Q L ++ A+ Sbjct: 443 VYPTDGKTVNTLLSNADMAMYQAKFRGGNQ-FSFYTEKLNKKTNQQFQLELDLQKAIVHH 501 Query: 503 DLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L QP E + ++ GI+ P F+P L VL Sbjct: 502 EFFLLYQPQFTVNTHEIRSMEALIRWNHPQKGIILPLDFIPTAESSGLIVPIGEWVLRET 561 Query: 560 LKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 K + R + N+ L Q++ + L K Y + P + LEITE Sbjct: 562 CKQIGAWRTMGLPEIRVACNVASKQLRQRDFPAMVEDLLKEYSVEPHCLELEITENVIID 621 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + I++L G I +DDFGTG ++ LK++ D +KID F+++I + D Sbjct: 622 --KEIQRTIKKLKSLGVLIILDDFGTGNSSLNLLKQVAVDSLKIDQSFIQNISKSPGDEA 679 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I+ +I +A++ + +++AE VETQ Q L K +QG+L+ +P P + Sbjct: 680 IIDAIIAIAQSMNFNIIAEGVETQNQLKFLKKRRCNDIQGFLMSKPIPPEE 730 >UniRef50_C4ZM14 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM14_THASP Length = 712 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 110/621 (17%), Positives = 208/621 (33%), Gaps = 32/621 (5%) Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 + S D P + + + ++ L + ++ + Sbjct: 69 ALAQVQASGLDLPFVVVSASLADEEAGRLMALGAHDYVHKHDLARLAPALARGLAEARGR 128 Query: 198 ILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF- 248 R +E + +++ +L + I G+ Sbjct: 129 RARRHAEDGLRAREAHLRIWGEVVEGLHEGIVVTNLAGDILDCNPAFERITGHARAEVLG 188 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--- 303 + + A+ T + Y L + Sbjct: 189 LNPRVLKSGRHDAAFYAGMWDALVTRGSWVGEVWNRRKSGEIYPERLALRAVRGADGLPT 248 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCL 355 + M R + R DPLT N + + +Q + L Sbjct: 249 HYVGMFSDISREKQDQARLDYLTHHDPLTGFANRQLFMERLQQAVERAAAGEGKAAVLLL 308 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D ++ G ++ + + ++ L +L E L++++ L Sbjct: 309 DLDRFRRVNESLGQDAGDRLLQVMAERIAGCLKRRSSLARLGSDEFLVLITEFTDADALA 368 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC-AHHHV 471 + + + N L M + + LL ++ H Sbjct: 369 ALARRILDEIARPVTVNGQLLHMSASLGISVHPQDGADAEHLLQAAEAA--RAQIRHGLG 426 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 L + + + + + + +R AL +G+L LY QPI + + +L Sbjct: 427 NRLHFFTAGMDTRARRWIEVESELRHALARGELQLYYQPIVCVRDGRVRTVEALLRWNSP 486 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 G ++P +F+P+ + L LE+ + + R +VN+ L Sbjct: 487 ALGWVSPAEFIPVAEESELIVAIGDWALETACRQVRHWQDTGLPAVRVAVNVSAHQLAGG 546 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + R+ + +R I P + LE+TE S++E +E + + G +A+DDFGTGY+ Sbjct: 547 RLPERVREVLERTGIDPGQLELELTESAMMSDSEHGARQVEAISRMGVSVALDDFGTGYS 606 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L R +KID FV + + ++IV + LA+ L VVAE VET++Q+AL Sbjct: 607 SLAYLSRFALTKLKIDRSFVDGLSRDPKSSIIVDATLGLARGLGLRVVAEGVETEEQRAL 666 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G LQGYL P A Sbjct: 667 LAAAGCDALQGYLFSPPVAPA 687 >UniRef50_A6W0I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0I4_MARMS Length = 806 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 110/563 (19%), Positives = 207/563 (36%), Gaps = 33/563 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFT 252 ++ + + AA +LLL + + + Sbjct: 230 KRLNTALSDLERSDSHTKAMIEHAADGILLLDENYQITLVNAAAEHMLKMKSEDLNSKSL 289 Query: 253 LGVGKLRYP--FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS-VCLLYMV 309 + F N+ ++ + E + LA L ++ Sbjct: 290 DVLHSPSSWPEFFNILESLEVNSPTTVE-TIYRMQGIELPVEIRLAKYKVQDKTETLLLI 348 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG----------KSFCCLRIDN 359 R + R H A D +T LPN + L + + + +D Sbjct: 349 RDVSERKETEARIHHLAYYDSVTNLPNRQYLADKLYKAIKTKQKNTTSSYSAVVFMDLDR 408 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----EGRL 414 + ++ G + + + L L +EN ++ G E +L+ E + Sbjct: 409 FKTINDSLGHNVGDQLLCCVATQLSSLTEENIVFARMGGDEFAFLLTHVGDDKEKVEKAI 468 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 V + + + + + FDGN+ + + +L Q ++ Sbjct: 469 NGFVESVMYACQQVKKAGHHEVHITASLGATIFDGNEGSAEAILKQADTALYRAKESGRN 528 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYD 529 + + + ++ + + A + LY QP N E G + ++ Sbjct: 529 -TFALYKPEMQAVSDARLEMEKALHHATEFKLFELYYQPQTNDKNELIGAEALIRWKDEK 587 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQ 586 G ++P +F+P+ + L VL L +AT + R S+N+ P+ Q Sbjct: 588 KGFISPAEFIPVAEEIGLIVEIGHWVLNEALSQVATWLKEGKWQLSWRMSINVSPIQFQQ 647 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + +++ + P V LEITE ++ S + + + G ++IDDFGTGY Sbjct: 648 AGFLPMLKTQLEKHDVPPSCVDLEITENMLLNDLSSCLKKMNAIKALGVHLSIDDFGTGY 707 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ + LK L D +KID FV+D++T+ D IV ++ +AKA ++SV+AE VET Sbjct: 708 SSLKYLKSLPIDRLKIDQSFVRDLLTDKSDEAIVHAVIAMAKALNISVLAEGVETLLHYN 767 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L ++ Y QGY G P P + Sbjct: 768 RLREIDCFYYQGYYFGHPVPPNE 790 >UniRef50_A9BZW1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BZW1_DELAS Length = 1120 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 126/754 (16%), Positives = 239/754 (31%), Gaps = 52/754 (6%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWN 78 + I +S +S +F M + V+L+ L WR + ++ Sbjct: 321 LWRLNFIPVSTALSWTERAQPLVLFALGMLVSVLLASLAAAWWRRHPSSWAQLRASSRSM 380 Query: 79 FHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC 138 A+ + VV A R +T Q L + Sbjct: 381 RESDARFQALFEQAAVGVVQIDAANGNVLHVNRRYCDITGHEAQQLCQRPLL---ALVAA 437 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 L SL L + L + + +++ Sbjct: 438 ETVEGDRLLLQELAAGQRRALQIERQLRRSDGSLVWVELHISALGHGPSLRLMALVQDIS 497 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT---PYENDFIAGYLVPVFFIIFTLGV 255 R + + L + +L + +F+ + G Sbjct: 498 ARRHLQQMQRDGSRHLRMVIQRLPLGLAMLQEDGRFAYWNEEFMRLAGHGATAGMDGDGW 557 Query: 256 GKLRYPFLNLTWAVSTLCLL-----------------------NYNQNFLQGVETEYSLA 292 + P + + + S++ Sbjct: 558 WRNMCPDEARRQRMQRRFEAAQARARVAQSPHGSESDSCGTLNSEEYQLIGSDGCARSVS 617 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------ 346 +L L +++ + + A D LT LPN R L +Q Sbjct: 618 IGGMLLD---EGCLLILQDQSQRKTAEEEIRRLAFYDALTGLPNRRLLVDRLQQALASSR 674 Query: 347 --EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +DN + + GL + +R I L + L + G + +++ Sbjct: 675 RRGRCGAVMLLDVDNFKAFNDSLGLELGDVLLRMIAERLAQSLGREATLARHSGDDFVVL 734 Query: 405 LSGP--ETEGRLQHMVNILNSRQIHWN------NTGLDMGYGAAWGRFDGNQETLQPLLG 456 L ++ + + + + F + + +L Sbjct: 735 LEDLGKDSMHAASKLEGEVQRMRSLLLQPLQLSGQSCHITLSIGASLFGEQELSADEVLR 794 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKE 515 + Q+ L + + + + +R L + +LY QP N Sbjct: 795 RAEMAMYQAKGMGRN-TLQFFDPQLQAVLRSRTAMEQEMREGLVRSQFVLYYQPQVANGR 853 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGP 573 G + +L G++ P F+ L + L + VL + LA + Sbjct: 854 IVGAEGLLRWNHPREGLVPPSLFVSLAEETGLIQQLGEWVLGEACRQLAQWAAEPDMACL 913 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ P Q ++++ K + +P+ + LE+TE ++ + + + L Sbjct: 914 MLAVNVSPRQFHQARFVEQVLQALKEHGANPRLLKLELTESLLLADVDDTAAKMATLKAH 973 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++DDFGTGY++ LKRL D +KID FV+D++++ DA I R+I L + L Sbjct: 974 GVGFSLDDFGTGYSSLAYLKRLPLDQLKIDRSFVRDVLSDPNDAAIARTIVALGTSLGLQ 1033 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 V+AE VET+ Q+ L QGYL+ P P+ Sbjct: 1034 VIAEGVETEAQRQFLEDQHCHAWQGYLLSPPVPV 1067 >UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Tax=Chromobacterium violaceum RepID=Q7NXP8_CHRVO Length = 712 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 113/681 (16%), Positives = 226/681 (33%), Gaps = 37/681 (5%) Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC---SMY 141 ++ + + Q G L + G+ Sbjct: 13 TMTALMMLVALLSTQGYQVSSAQSGAEALDLALKHPPDLILLDFSMPGMDGLAVCRELKL 72 Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + L +S+ + F + + Sbjct: 73 NPRTRDIPILFLSSVSDSQTKVDGFAAGAVDFIIKPFERSELLARVNTHLDLARLKKRLS 132 Query: 202 RDIAP----SLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLV------- 244 + + E+R L A ++++ + + + + G + Sbjct: 133 KLVEEKTESLRLSEQRFRALIEQAPEAIMVYNMDTGRFVDANRQAEKLTGRSLQTLVGIS 192 Query: 245 -PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + + + + + + + L+ L S + Sbjct: 193 PAALYAPEQPDGLPVAESVSMHSEQAQKGDIPPFERIVQRPDGSAIPCEVRLSKLPSETG 252 Query: 304 CLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------QEAGKSFCCL 355 LL + + A D LT L N L + Q+ G + + Sbjct: 253 NLLRVSYIDISSRVAAQEKINRLAYFDTLTGLHNQSGLLEQLSALYSLSWQQPGFAVLLI 312 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 + + +F++ YG + + + + L + + +L G E +L+G + Sbjct: 313 ELGDFKFINDVYGNRIGDLLLCHVAQRLQQAIGPHGHAARLGGVEFAALLTGVAGAAEAE 372 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + L + + + L+ + ++ Sbjct: 373 AIACRMLDAVSEPFPVDEMMLSVTASIGISLGPEHGADGRELMARADMALYRAKEKS-AR 431 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + EE + Q ++V L ++R A+D G+L+L+ QP + G + ++ Sbjct: 432 RVQVYEEELGQQMRERVELEKSLRHAIDHGELVLHYQPQIELSTRRVVGVEALVRWQHPQ 491 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN 588 G++ P +F+P+ Q L VL + L + R +VNL Sbjct: 492 KGMIPPMRFIPIAEQSGLILPLGRWVLREACRQLKVWQDKGRDDLRMAVNLSVAQFTDHE 551 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + K +SP+ + LEITE + + S+ +E+ G +IDDFGTG++ Sbjct: 552 LPDFVADVLKETGVSPRHLELEITESCTMLSPQQSIGMMERFRAMGIHSSIDDFGTGHSA 611 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L R D +KID F+++I + + +I LA L VVAE VETQQQ L Sbjct: 612 LAYLTRFPVDTLKIDQSFIRNISNDEKGTALCDTIAYLAHRMGLQVVAEGVETQQQLTFL 671 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + V +QGYL+ +P P + Sbjct: 672 SSIHVDVVQGYLLCKPLPAVE 692 >UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acinetobacter radioresistens RepID=C6RJR5_ACIRA Length = 855 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 111/598 (18%), Positives = 208/598 (34%), Gaps = 32/598 (5%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 A +DL +L + + R I Q R Sbjct: 255 AYHASGEMIWLDLTNLPIKQNHQVTGVFGIARDITLRRKNQEHLRLLKRGVNASPNGIII 314 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLC 273 A ++ + GY F G + A+ Sbjct: 315 TDATA----ERKIVYVNPAFLHMTGYTEEDVMGKTCHFLQGPETEAEKIALVQQALKEHK 370 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDP 330 + + + + +L + + L + + Q D Sbjct: 371 EIQVTVKNYRKDGSWFWNRLMLGPVFDEAGRCTHFLGIQEDITQQRIHEDYITHQHSHDH 430 Query: 331 LTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT L N + E +Q C + +D+ + ++ G ++ I+S+ Sbjct: 431 LTGLANRQTFETNLQQAFETQHHSSKPLFLCYIDLDDFKPLNDSLGHLIGDQIIKSVSDR 490 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGA 439 L L+Q + L + G E L++ + + + + + + Sbjct: 491 LQALLQTGDFLGRFAGDEFALLMVNRNKRSEVITTAEEILKLFTQPFQIDEHKIHLSASI 550 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM----VSGQTTKQVLLLNTI 495 D + + LL +++ EE + + L + Sbjct: 551 GIVADDCSIQRSSELLYHAVLAMKEAKRQGRN-TWHWYEEANKKVMPEIDYAHLRLE--L 607 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 AL+ L+ QP+ N +G + ++ G + PD F+PL + Sbjct: 608 MEALNDNQFNLFYQPLINPATGLAKGVEALIRWNHPQRGYIFPDIFIPLAERTGQIVAIG 667 Query: 553 LQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL+ +A + SVN+ PL + + ++P+ + +E+ Sbjct: 668 QWVLKKACMDIAEWNKTHQSQLTVSVNISPLQFRRAGFLQELEHALDISTLTPELLKIEV 727 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE A+ ++ ++ + + G +++IDDFGTGY++ L+RL + IK+D F++ + Sbjct: 728 TEGMVIIGADRAIEILKSIRELGVQVSIDDFGTGYSSLSYLRRLPINQIKLDRSFIEHLT 787 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + DA IV+SI LA +L VVAE VET +Q A L++ G LQGY RP P+ + Sbjct: 788 ESDQDAAIVQSIIHLAHQLNLEVVAEGVETLKQAAFLYQQGCDLLQGYFYARPAPITE 845 >UniRef50_C3KQA4 Putative uncharacterized protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KQA4_RHISN Length = 1105 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 98/601 (16%), Positives = 202/601 (33%), Gaps = 35/601 (5%) Query: 154 STFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR 213 + + A + + + + + R I A+ + +R Sbjct: 472 TAIRDNTGAERYMDVITAPVLGAFGEPIRMLAIWRDITEARKARDDAEAARLHAERLAER 531 Query: 214 AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPF------LNLTW 267 + SV++ + +++ + + + L F + Sbjct: 532 LSGVLESTMDSVVVADRD--WRIEYLNSKAMRLLQVDEQAVGLDLWRLFPVNDSSVFAVE 589 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR------- 320 + + E L A R + Sbjct: 590 YRKVMSEHSSTTFEAYLEGLERWLEVHAAPTFEGISLF---FRDITERHKAEQERLLAHR 646 Query: 321 RWHLQALTDPLTLLPNFRALEQ---AP----EQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 + H A D +T LPN + L + + + L +D + ++ YG Sbjct: 647 QIHHMARHDAVTGLPNRQFLREAFERLFEGTRARSKTAVLSLDLDGFKAVNDAYGHPTGD 706 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNN 430 +RS+ L ++ + + +L G E +++ +G E + + + Sbjct: 707 LLLRSVAERLRRCVEGGDTVARLGGDEFVILRTGVRQEEEAIDLSQRIIDALGAPYELDG 766 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 D+G + L+ ++ A + E + + Sbjct: 767 VQADIGVRVGIAFSPRDGRAADQLIKAADIALYRAKARGRGTYIQ-FEPGMDAHLQARQQ 825 Query: 491 LLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + +R AL +L L+ QP+ N + ++ + G ++P F+PL + L Sbjct: 826 MKVELRRALANDELELHYQPLVNLRTGLIATCEALVRWNHPEKGAISPVDFIPLAEETGL 885 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 +L P +VNL PL + + + K + + Sbjct: 886 IVPLGEWILRRACAEAVQWPQQ---VSVAVNLSPLQFRSRRLVSVVRDTLKESGLDASRL 942 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 +E+TE +++++ ++ + + G +IA+DDFGTGY++ L+ D IK+D F+ Sbjct: 943 QIEVTESVLLDESDNNLRVLQDIRRLGVKIAMDDFGTGYSSLGYLRTFAFDKIKVDRGFI 1002 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 D+ T I+R++ + + ++ E VETQ Q ++H G QGYL RP Sbjct: 1003 SDLPTGKESLAIIRAVAGIGRTLGITTAVEGVETQTQLDVIHAEGFDEAQGYLFARPLTA 1062 Query: 728 A 728 A Sbjct: 1063 A 1063 Score = 61.5 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 7/138 (5%), Positives = 24/138 (17%), Gaps = 11/138 (7%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND-----FIAGYLVPVF 247 R+ + E R ++ A + + + G + Sbjct: 252 LVENIDDRRKALEALKESEARFRAIADDAPVMIWVADENGASVYQSRVWLETTGQIAEQA 311 Query: 248 FIIFTLGVGKLRYPFLNLT---WAVSTLCLLNYNQNFLQGVETEYSLAFILAV---LISF 301 L A+ + + + + + Sbjct: 312 QGFGWLDAIHPDDRIDAEAAFNEALRLRTPVRTEYRLRRVDGSYAWVIDVGQPRFATDGG 371 Query: 302 SVCLLYMVRIYHRSEWLN 319 + + + Sbjct: 372 FLGYVGVGLDITERRQAE 389 Score = 41.9 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 7/141 (4%), Positives = 21/141 (14%), Gaps = 17/141 (12%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---------CTPYENDFIAGYLVPVFFII 250 R ++ ++ + G + Sbjct: 1 MENTQLSLSKSPLRFDDGLEAILDAIPQPIIVKDEQSQFRFLNDAACALIGRGRDDLIGL 60 Query: 251 FTLG---VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC--- 304 + +ST + Q + +L S Sbjct: 61 TDFDVLPASEADRIREMDRRVLSTGEEFLFEQEITSADGSVRNLLTQKRRAELTSGHSKQ 120 Query: 305 --LLYMVRIYHRSEWLNRRWH 323 ++ + Sbjct: 121 QLVVATILDVTARRRAESELR 141 >UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVS2_RUBXD Length = 762 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 129/739 (17%), Positives = 238/739 (32%), Gaps = 36/739 (4%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 F L L + L+ S A+ + + L + + L Sbjct: 21 GYFLLPAGLAAAVYILTGASSAAAVALGALLHRPSRRLP-WFVLSLGPLLMSLADCLWSY 79 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + + + S+ +LG + +L+ + + L + G + Sbjct: 80 YWSRGSVPYPSYADALYLLGYV--FLGAGLLLLQHRTVSNGLDALVDPLMVAS---GGAL 134 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 G+ Y+ P K + + + L Y L Sbjct: 135 LYWGLIIGPYVHDPSLSLPAKAVSVAYPLLDVLLLAALARYLLGFGGRVPALYLLG---- 190 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 FA +L + + SW+ A L + + + V Sbjct: 191 -LSFAVLLLADSVYGLQVLQGSYRDGSWVDA-GWLACYVLLGAAALHPSMRGLSVPQPGS 248 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS-----LAFILAVLISFSVCLL 306 LT A T L Q L Y + +I ++ Sbjct: 249 AEPALLTNRRIALLTGAALTAPGLLAAQAALGVRIDAYPIAAGCVLIFALAVIRIRGIVV 308 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRI 357 ++R E L R QAL DPLT L N + L + Sbjct: 309 ALLRTLSERERLQERLEQQALHDPLTGLANRALFSDRLAHAASRANPLDCGRLAVLMLDL 368 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + + S+ + ++ ++ + +L G E +++ G + Sbjct: 369 DGFKSVNDSLGHEVGDALLVSVAGRIRACVRPSDTVARLGGDEFAVLIEEISDVGAAVRV 428 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + G + LL + Sbjct: 429 AERILDRLGEPYSVGGVGRVAAASVGVAFGP--AREAKSLLRDADAAMYVAKERGKGR-Y 485 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + E + +++ L +R AL++G+ ++ QPI + E + ++ + G Sbjct: 486 EVFEPRMRNARAEKLRLEAELRAALERGEFAVHYQPIVSFATGEVVEVEALVRWERPGRG 545 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 + P +FL + + L VL + + + +VNL L + Sbjct: 546 TVGPAEFLSVAEESGLIVPIGRWVLREACRQVREWQKGGSRELALAVNLSASQLHHPRLV 605 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + + LEITE+ A +A + +E+L G RIA+DDFG+GY+ Sbjct: 606 REVEEALGLSGLEARHLKLEITEQAAVEDAREAARRLEELSALGVRIALDDFGSGYSALS 665 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+ D +KID F++ I + IV ++ LAK+ ++ V AE ET++Q A L Sbjct: 666 YLRTFPVDTLKIDRSFIEGIGRDLQATSIVGAVIALAKSLNMCVTAEGTETEEQLAHLRS 725 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG QGY RP + Sbjct: 726 LGCDLAQGYYFSRPASPEE 744 >UniRef50_Q139W0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q139W0_RHOPS Length = 801 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 124/747 (16%), Positives = 253/747 (33%), Gaps = 33/747 (4%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRF-ISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + ++ + I++ F + + F I S + L + ++ Sbjct: 50 LLTAGVVTGVGIWSTHFIAMLAYLPGFDFDFDFSLTIASLIVAAVMATLGLSVAAYGEAR 109 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 W VV + F+ + + + L + L ++ Sbjct: 110 WTTVVG----GGLVGAGIAAMHFMGVTSLNFATLWDWDLVAVALLFGLSLSVGAVALAQR 165 Query: 121 VWQRL--FWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD-ADAIFTVVDLLSLFTAVL 177 + + I ++ D I + + T+ +++ T + Sbjct: 166 GETLRSLAGAAGLLALAIGSHHFIAMGAMDVLRPIQIYDATGRISPLTLCLTIAVVTGAI 225 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR--AFTLSWLAALSVLLLLLCTPYE 235 L L + A+ + D+A + + + L + Sbjct: 226 AVAALLVALVDRRSNRRVAERSMQLDVALNNMGRGLCMFDVGGRVQLFNSQYLEMYNLRA 285 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ-GVETEYSLAFI 294 +D +G + + T + + + + + + Sbjct: 286 SDIRSGDDLDRLLHLKTAVGTSPSDVDAHCGHLSAAIAERIPADWMTALPDGRKIHVTYQ 345 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------- 347 + + R A D LT LPN A ++ E+ Sbjct: 346 PIA----NGGWVITHEDCTERVQNRARIDFLAHHDALTQLPNRIAFDRHLEEAILRAKAT 401 Query: 348 -AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + C+ +D + ++ YG +R + R L + + ++ G E ++V+ Sbjct: 402 RSSFAAICVDLDRFKEINDVYGHGAGDAFLRDVARRLTAA-GDGAFVARIGGDEFVIVVE 460 Query: 407 GPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + G + N + + L+ Sbjct: 461 KGVQPRAAEELCGRIVRAFDLDFQLKGGAVKGGCSIGVAIYPDNGSSAEELIANADAALY 520 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDE 521 + A + E + ++ +L + A++ + QP + E G++ Sbjct: 521 RVKADQRG-SFRFFETTLDASLREKRMLHKELIEAVEAEQFEPFFQPQVTASGEVVGFEV 579 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 + + G++ P +F+ L + L + D Q+L + + A+ +VNL P Sbjct: 580 LGRWRHPNRGLVMPARFIALAEETGLISGIDEQILRAACREAASWDR---PLSIAVNLSP 636 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + ++A I+ + +SP + +EITE + +M + ++ G +A+DD Sbjct: 637 IDFRRGDVASMILSILFETGLSPGRLNVEITEGVLMQDDGRAMSQLRRIRDLGAHLAMDD 696 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FG+GY++ L+ D IKIDG FV + +N IVR+I L + LSV+AE VET Sbjct: 697 FGSGYSSLSYLQAFPFDKIKIDGTFVAQLGSNPQSRAIVRAIIGLGHSLGLSVIAEGVET 756 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 Q LL LG QGYLIG P P A Sbjct: 757 NAQFELLVALGCDEFQGYLIGHPAPAA 783 >UniRef50_C6XCZ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ3_METSD Length = 776 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 111/761 (14%), Positives = 238/761 (31%), Gaps = 81/761 (10%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHL 81 ++ +R AI+ S +++ + + + + ++ + V + + Sbjct: 29 MLYASSTRSFVFAAIVASLLVYVQLDVVPLAVCLAWMTFFLIVYGLRKALVWVYKRTPVH 88 Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC--- 138 ++ + + LC A + + + + + Sbjct: 89 AYPPGFWLNWFRALSGLCGIAWGLSGIFLFYPHDTAHQAFLTLALAGVCGGAVMAYATDK 148 Query: 139 --SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + G L + G+ ++ V+L L + + F R+ + Sbjct: 149 PTAYAFAGGLILLGLPRFFWGGNHFSMLMAVNL--LLFILYVTIASFKLANRLRENIVLR 206 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIF 251 + +R L+V+ + + I GY Sbjct: 207 IMA-HESQEAINAMAQRQKLHIDHTPLAVIEWDVNFRVTSWNAAAEHIFGYPPSEAMGRH 265 Query: 252 -----TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + ++ + ++ ++ + + + ++ Sbjct: 266 MSFIVPPDGQMMAQDIMSKLTHEAGGQHWQHD--NVRRDGRVIHCEWFNTAIKNDQNRII 323 Query: 307 Y---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCL 355 +++ + A D LT LPN R L + Q + Sbjct: 324 GFASLIQDETAYKKAQDEIERLAYFDALTNLPNRRLLMERLSQALNNSRSSHRIGGLMFI 383 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +DN + ++ G ++ + LL ++ ++ + ++ G E +L+L + Sbjct: 384 DLDNFKTLNDSRGHAFGDLLLKEVAARLLRAVRNHDTVARIGGDEFVLLLEDIGRDESAA 443 Query: 416 -----HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + S N F ++ +L + ++ Sbjct: 444 IQTASQIAEKILADISLPFDLGNYKHQCSASIGICMFYRQGMHVEEVLKRADAAMYETKR 503 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILAR 525 +E + + L N +R AL G LY QP + G + +L Sbjct: 504 AGRN-NYRFFDESMLPVIDSRASLKNDLRFALSLGQFELYYQPQVDGELRTTGAEVLLRW 562 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLT 583 + G++ P +F+PL + + VL+ L R SVN+ + Sbjct: 563 HHPERGMVPPGEFIPLAEESGMIIPIGNWVLQQACMQLGKWSHHAKTSQLRLSVNVSAMQ 622 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q + ++ + + ++LE+TE N + + ++ L G +++DDFG Sbjct: 623 FGQADFVEQVRHALLESGCNEKLLVLELTESLVIQNIDDIVSKMQALKSIGVSLSMDDFG 682 Query: 644 -----------------TGYANYERLKRLQADIIKIDGVFVKDIVTNT---LDAMIVRSI 683 KID FV++I N A+IV++I Sbjct: 683 LGYSSLSLLLRLPLDSL-----------------KIDQSFVREIQDNAPKNDSAVIVQTI 725 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 + K L V+AE +E QQA L ++G QGYL GRP Sbjct: 726 VAMGKNLGLDVIAEGIEEPYQQAFLEQVGCHAYQGYLYGRP 766 >UniRef50_A5VGA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGA6_SPHWW Length = 813 Score = 616 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 121/757 (15%), Positives = 230/757 (30%), Gaps = 44/757 (5%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 L + I+ F + + + S + LA + ++ Sbjct: 50 LTMAGLTAGLGIWATHFIAMLGYDPGIVMGYHVQQTVVSLLVVLAGATAGLFIATRAPH- 108 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVV----LCACAILRWQLGTRWRYGL 116 + L + +L A + + A A+ Sbjct: 109 ---WLGSLLAASVMGGGVTAMHYLGMAALEMPALIRWKADYVAASAVFAIVPLVLALPLA 165 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 + + + + + F + + L A Sbjct: 166 LRGRSLAKGAAAAGLITAAVVLLHFTGMTAITLIPSRGEFSPLSMMSPRAMSLWIFLAAS 225 Query: 177 LIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT---- 232 + + + R + G + + + L Sbjct: 226 CTIALTAAAAITSRRTGIKLRRQERENQLRVQGMKAQLDLALENMHQGLCLYDGDGRLLL 285 Query: 233 -PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF---LQGVE-- 286 + G T+G +L +N L Sbjct: 286 WNQRFLDLYGLGSDALQCGMTVGQVIRTGIANHLPVTEVEQRAAEIERNLNQALSASGDA 345 Query: 287 ---TEYS-LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 +EY + + + + R AL D LT LPN R Sbjct: 346 PAISEYPGVVVSVRSRALPDGGWVSTFDDITQQRRSEERIRHLALHDGLTGLPNRRRFND 405 Query: 343 AP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + +DN + ++ G ++ + L ++ENE + Sbjct: 406 VVDRDLDVTARAGSRLGLVVVDLDNFKDINDSRGHSAGDQALKMVAAALKDAVRENEHVA 465 Query: 395 QLPGSELLLVL---SGPETEGRLQHMVNILNSRQIHWNN-TGLDMGYGAAWGRFDGNQET 450 +L G E + E + + L I+ N L + + + + Sbjct: 466 RLGGDEFAAAILYREDYELADFVTRLSTGL--AAINAGNAHDLSVHASLGIATYPADSQD 523 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + L ++ + E+ + Q ++ L +R A +G++ + QP Sbjct: 524 REQLCNHADLAMYRAKGTVGER-ICYYEKGMDEQARERRQLAADLRGAAARGEMTILYQP 582 Query: 511 IRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 R+ GY+ +L G++ PD F+P+ + VL + A Sbjct: 583 QRSLKDDRVNGYEALLRWTHPKRGLVPPDIFIPVAEETGEILALGEWVLRQACEEAARW- 641 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 G ++NL + L Q ++ + + ++P+ + LEITE ++ +++ + Sbjct: 642 --GDGLTVAINLSAVQLSQASLPESVAQTLLETGLAPRRLELEITETAIIADKPRALHIL 699 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G IAIDDFGTGY++ + L D IKID FV I+R++ L Sbjct: 700 RRLKAMGIAIAIDDFGTGYSSLDTLNSFPFDKIKIDKSFVIGSEERPQARAIIRAVLALG 759 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 + + V+AE VET LL G +QGYL GRP Sbjct: 760 HSLGVPVLAEGVETSGHVDLLVAEGCDQVQGYLFGRP 796 >UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Photobacterium profundum RepID=Q1YXX2_PHOPR Length = 725 Score = 616 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 105/429 (24%), Positives = 187/429 (43%), Gaps = 16/429 (3%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHY 367 + A D LT L N R L + EQ + C +D+ + ++ Sbjct: 289 KQKTHELEKFAFYDYLTGLANRRLLNEHLEQVIQQTECCGNSAALLCFDLDDFKRINDSQ 348 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 G + ++ I L ++ +N+ + +L G E ++LS + + L S Sbjct: 349 GHDIGDCVLQQISHRLNSVVNKNDIVARLGGDEFTVLLSASYSASDAGRIAGQLIEVISE 408 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 I NN L + + + LL + + + + Sbjct: 409 PIFLNNKELSVSASVGITMIPSDGNDVSTLLRNADMAMYSAKKSGK-RNYHFFNKALQKK 467 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 +V + ++ TA+ + +L+ QP+ N + Y+ ++ G++ P++F+ + Sbjct: 468 ALDKVSIEESLDTAISKKQFVLHYQPVFNFYSNKLCCYEALIRWNHPREGLLYPERFIGI 527 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + V++ + + H K R +VNL P ++ I R+ + Sbjct: 528 AEESGKIKNIGYWVIQEVCNVIKMHQLHIGKRHRIAVNLSPRQFNDPDLLENIRRIIRNV 587 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 I + + +EITE N ES++Y + Q + G +AIDDFGTGY++ LKRL D + Sbjct: 588 GIDARFLEIEITESTLMENVESAIYTLRQFKELGITVAIDDFGTGYSSLAMLKRLPVDKL 647 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FVKD+ +N D IV+++ +A +SV+AE +ETQ+Q LL + G + QGYL Sbjct: 648 KIDRSFVKDLDSNNSDQKIVQALISMAHTLQISVIAEGIETQEQFNLLQQYGCDFGQGYL 707 Query: 721 IGRPQPLAD 729 RP P+ + Sbjct: 708 FSRPVPITE 716 >UniRef50_Q2W7L5 Predicted signal transduction protein n=2 Tax=Magnetospirillum RepID=Q2W7L5_MAGSA Length = 916 Score = 616 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 113/649 (17%), Positives = 231/649 (35%), Gaps = 29/649 (4%) Query: 109 GTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIF-TVV 167 G R+ + + G V + + VG++ DA+ V Sbjct: 254 GRRFVVVVEQPLLSALKLPGGAVVIVTLVLLFGGVGAWVLVRYSRRAILAPIDALAEAVR 313 Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 D+ + + + + ++ + + E++ + A+ ++++ Sbjct: 314 DVEAGDMSRRAPVESSDEIGALAMAFNSMTGRVAGLLNDLGESEEKFRLVMESASDALVV 373 Query: 228 LLLCT-----PYENDFIAGYLVPVFFIIF------TLGVGKLRYPFLNLTWAV-STLCLL 275 + + GY + L + + + Sbjct: 374 IDAEGKIVSWNGAATRMFGYQPAEIMGRNVSLLMPEHLRERHDQILARLRAKIDARIRTD 433 Query: 276 NYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 Q ++ T + + LA + ++R + A D LT L Sbjct: 434 PREQPAMRQDGTLFPVEVTLAGFSFKGNRFYSGIMRDISARKEAESNIRFLARHDALTGL 493 Query: 335 PNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L + ++ + +DN + ++ G + + L + Sbjct: 494 ANRVVLRERLDEILPQTGARQMHCLLFIDLDNFKLVNDVLGHSFGDRLLVEVAGRLRSIE 553 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRF 444 + + + G E +L+ T R + + + + +++G Sbjct: 554 GGHNIVCRHGGDEFILLAPDIRTRERAAELAERVLAVMGDAFAIDAQAIEVGCSIGISVA 613 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + L+ + ++ L + Q ++ L ++R L G++ Sbjct: 614 PDDGTDAETLIRKADIAMYKAKEKGR-LGYQFFTAAMDHQMVERRELEKSLRRGLRDGEI 672 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 ++ QP + G++ + + G++ P +F+PL + L VL L+ Sbjct: 673 FIHLQPKVRLGDGGVTGFEALARWQSAEHGLVPPVRFIPLAEECGLVGAIGDVVLRRTLE 732 Query: 562 WLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 LA + +VNL + L +AG I L + + + P + LE+TE + Sbjct: 733 TLAGWRAAGRKVLPVAVNLSAVQLGNPALAGEIGALLREFDLPPSLLELELTESMLMGDV 792 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + + +L G R++IDDFGTGY++ LKR D++KID FV D+ + + Sbjct: 793 DQVRAILFRLKDQGIRLSIDDFGTGYSSLSYLKRFPVDVLKIDRSFVTDLPGDPEGEALC 852 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I +AKA SL V+AE VET+ Q L + G Y QG+ RP P+ + Sbjct: 853 LAIIHMAKALSLDVIAEGVETEAQSLFLARHGCDYAQGFHFARPVPVDE 901 >UniRef50_C4ZJQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZJQ2_THASP Length = 1050 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 121/599 (20%), Positives = 218/599 (36%), Gaps = 28/599 (4%) Query: 156 FFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 G+ + L + + R + DI E+R Sbjct: 425 IRGETAFYEHDLRLRHCDGRWIWVYDRALAVRRDADGRALLLTGAQIDIDRRKENEERLR 484 Query: 216 TL---SWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLN 264 + ++L+ ++ I GY + R + Sbjct: 485 LAASVFSSSYEAILITDVDNRIVDVNPAFCRITGYSREESLGRDPGMLASGRQGREFYRA 544 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRR 321 + A+ + +E++ ++ + + L M R + Sbjct: 545 MWQAIEEHDHWQGELWNRRKDGSEFAEVLSISRVRDARGRVIHHLAMFSDISRLKKHEEE 604 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRV 373 + A DPLT PN R L+ Q + C + +D + ++ G Sbjct: 605 LNRIAYFDPLTGAPNRRLLDDRLRQAIAHSRRTGKPLAVCVIDLDGFKPVNDQLGHEAGD 664 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGL 433 + I L +++ ++ + +L G E +L+L E E L+ ++ + I + + Sbjct: 665 QVLIGIVDRLGAILRASDTVARLGGDEFVLLLEDIEGERVLERVLEAI-RTPIALASQQV 723 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + F + LL ++ + + V Q + L Sbjct: 724 CVSASIGVTLFPEDDADPDTLLRHADQAMYRAKQRGRN-CIQFFDASVEEQQRVRKERLE 782 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 + AL + + +L+ QP + G + +L + G++ P +FLP + L R Sbjct: 783 RLDQALRRQEFVLHFQPQVDMVDGRPLGMEALLRWQHPERGLLAPGEFLPDLEGTELETR 842 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVIL 609 V++ L L SVN+ P L+Q + +R+ I P+ + L Sbjct: 843 LGQWVVDHALGALERCRAAGLDIGVSVNVGPGPLMQAGFVASVRSALERHPDIPPERLEL 902 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EI E A + +M +E H+ G RIA+DDFGTGYA+ ++L D +KID FV D Sbjct: 903 EILESTALDDMVLAMDVLEACHRLGVRIALDDFGTGYASLRHFRQLPFDRLKIDRSFVLD 962 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + IV ++ LA+ V+AE VET A L LG + QG+ I RP P+ Sbjct: 963 MLEDGEARAIVGAVVQLARTFGREVIAEGVETPAHAAALLALGCRLGQGFGIARPMPVE 1021 >UniRef50_Q3A254 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A254_PELCD Length = 874 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 102/646 (15%), Positives = 221/646 (34%), Gaps = 26/646 (4%) Query: 104 LRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 + + L +V I+ + F I T Sbjct: 206 FGRLHSGPSWPSWSEQSTAAPEILLRVVDATRIRARVLFRDIFGVPAAVIGTNLSRDIYA 265 Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + ++ +L+ +++ +I +RD + ++ Sbjct: 266 QGLQSIIYFHIWLLVVSLMAGVCILVIWDRLAGSRQRQRDSEHLFQHLFQFSADAFFLCE 325 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + + + + ++ L+ T +ST + F Sbjct: 326 EQGRFVDVNHQSCAVLGFDRQKLLSLSWSDITDAAIGNLLSRTQRLSTAAPVPMEATFTG 385 Query: 284 GVETEY--SLAFILAVLISFSVCLLYMVRIYHRSEWL-------NRRWHLQALTDPLTLL 334 + ++ + + + + R + R + A D LT L Sbjct: 386 NRGRTFVGDVSVTHLEIQDQVLFFVLV-RDITERKAADTMLRKQKARLNYLAYHDVLTGL 444 Query: 335 PNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN + + ++ + +D + ++ G + + R + + Sbjct: 445 PNRLKAIELLQTYIGRANQRDTMVAVLIFDLDRFKNLNESLGHETGDEILMEVARRIQEM 504 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 +++ + + + G E L++L ++H+ L ++ + + Sbjct: 505 LRDTDVVARFGGDEFLVLLEHVADSTGVKHVAEKLLEAIAQPLRIGEQQFYLTGSIGISL 564 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + E Q +L + ++ + +++ L +R AL+ Sbjct: 565 YPKHGENAQTILKAADSAMYFAKEQGRN-TYRFFIPSINVEVEERLYLETDLRQALNLEQ 623 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 +L+ QP N + E + +L GI+ P +F+PL L VL+ Sbjct: 624 FMLFYQPEFNLHTGKVECLETLLRWQHPKRGIVGPGEFIPLAEDTGLIVPIGEWVLQEAC 683 Query: 561 KWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + + R +VN+ Q + R+ K+Y ++ + + LEITE + Sbjct: 684 RQVIAWREQGLPSIRVAVNISARQFRQSGFIEMVFRVLKQYGLAAEWLELEITESFVIQS 743 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 AE ++ + L + G +A+DDFG GY++ L++ +K+D FVK++V + D I Sbjct: 744 AEHALNMFKVLRQSGISLAVDDFGQGYSSLSYLRKFPFTKLKMDRAFVKNVVNDPHDEAI 803 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +I + + VVAE +ET++Q L LG QGY + P Sbjct: 804 AAAIIAMGDSLGQEVVAEGIETREQLDTLRTLGCPCGQGYYLALPM 849 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 615 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 103/600 (17%), Positives = 208/600 (34%), Gaps = 23/600 (3%) Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 + S +LSL + + R + Sbjct: 23 ALLVFIAFSGTAAQYGLQSRWDVVLSLGLGAALMLPCQWLNHRGHHEAAAGMV-LSVATL 81 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYEND-FIAGYLVPVFFIIFTLGVGKLRYPFLN 264 + L + L ++L+ L+ + + Sbjct: 82 SLFSIMWFSDGLRDSSLLGYPVILIGAGQLLKPRHFWMLLTFMLGCVVMLGLGTLNGWRT 141 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + L L + + L L+ + R + Sbjct: 142 GITSGTELDRLTDSVSILLINGFLIWFLT-----YDMQNALVRLRAQIARFHASEKNLTY 196 Query: 325 QALTDPLTLLPNFRA----LEQAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT LPN L +A ++ + + +DN + ++ G + Sbjct: 197 LAQHDGLTRLPNRILGNELLTEAMRVAAEEKNLVAMLFVDLDNFKDVNDSLGHSAGDDFL 256 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGL 433 + + L +++++ + + G E L+ L+G + + + + + + Sbjct: 257 VQVAQRLRESVRQSDIVCRQGGDEFLIGLTGLQHPDAVAKVSQDILQKMQAPFQLRGIEV 316 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + + L+ + E + T+ + L++ Sbjct: 317 LASCSIGIALYPQHGNSFDELMRHADLAMYHAKEAGRN-TFRFFSEDIRSSVTESLHLIS 375 Query: 494 TIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 ++R A+ Q + +L+ QP+ + G + ++ G+++P F+ L + L Sbjct: 376 SLRQAVTQEEFVLHYQPVYDLHSGRLLGAEALVRWQNPKLGMVSPGLFITLAEKSGLIVD 435 Query: 551 FDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + + SVNL P+ + N+ I + + + P+ + L Sbjct: 436 IGQWVLTEACRQMQAWRQQGATDLFVSVNLSPVQFSRGNVEAVIAQALRETGLDPRQLEL 495 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE + E + + ++ G R++IDDFGTGY+N L+R +KID FV+ Sbjct: 496 EVTESTLIHDTEKFITTLGRIQHSGIRMSIDDFGTGYSNLSYLQRFPVHKLKIDQSFVRR 555 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ D +V +I LAK+ L+V AE VE + + L ++G QGYL RP P D Sbjct: 556 LMQGQKDVAMVSAIIHLAKSLQLTVTAEGVENEATREALTRMGCDQAQGYLFARPMPAKD 615 >UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZMU9_PSEU2 Length = 972 Score = 615 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 95/568 (16%), Positives = 199/568 (35%), Gaps = 42/568 (7%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + + + + +L + +G+ Sbjct: 391 ERAALTAAQGLKLSKAAL-LVVDRVSHGTILHAGVGLTRFEIRSGHHDDFLNGTAPSAGF 449 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY------MVR 310 + + + + ++ + + + + + Sbjct: 450 VINSDAPDNRYTLLPAETVDA-YTIR----SSLEVDISCTEVFKGVLGVYASTDHPFTRE 504 Query: 311 IYH-------------RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-------- 349 ++ A D LT LPN L + Sbjct: 505 DVSYLQTLANLLAAALERYDAKKKLTYLAENDSLTHLPNRWFLSNYLREIISRKTSAPDA 564 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-P 408 S + +D + ++ G + + R L + EN + +L G E +V++ Sbjct: 565 VSVIFIDLDRFKAVNDTMGHSVGDQLLIQAGRRLKDCIGENSVVARLGGDEFSIVVTHSV 624 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 +E ++ + + + + + + + + +L Q+ Sbjct: 625 YSESLIKSLATHVVEALGKPFNLGGQDIFVSASVGIANYPFDGRDTGVILKNADTAMYQA 684 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 ++ T+++ +R AL++ + +L+ QP + G + + Sbjct: 685 KKSGRN-NFKFYNARMNESLTRRLQTETLLRGALERDEFILHFQPKVSLTDGRISGLEAL 743 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMP 581 L + G+++P F+P++ L + V+ + + L + ++NL Sbjct: 744 LRWNHPEQGMVSPADFIPILEDTGLIIPVGVWVIRKVCETLKRWEENHIRLVPIAINLSV 803 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L K +A + + + Y I+P + E+TE + ES++ + + +G +++DD Sbjct: 804 RQLQVKGLAETVKHIVEAYGINPALLEFELTESMLMIDPESAVEILRDIKSYGISLSVDD 863 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR D +KID F+KDI +N DA I R++ LA L+V+AE VET Sbjct: 864 FGTGYSSLAYLKRFPLDALKIDRAFIKDITSNHEDAAITRAVIVLAHELGLNVIAEGVET 923 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q LL G +QGYL +P + Sbjct: 924 VDQLELLVTYGCDQMQGYLFSKPVISDE 951 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 16/257 (6%), Positives = 54/257 (21%), Gaps = 7/257 (2%) Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCAC---AILRWQLGTRWRYGLTSRYVWQRLF 126 + A L + ++R V Q Sbjct: 104 AASAPLGRAPAWIESEVAARLFDVNRPITIGGKDYGVMRLSFNAERIAAELYSLVIQATL 163 Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 + G I + +++ K+ ++ + + + + + A + + Sbjct: 164 FAGFFLLISLMLMGFMIKRSLAHLGKLHSYEAEIASGAVAAEAMLVADAPMEIQEAIKAV 223 Query: 187 TRMIVS-PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 R S + + + + + +S + +S + + + Sbjct: 224 NRTAASMRNHFGLRIESLMNTLVQHKNALDEVSIVCEVSASGRITYVNERFVTSSQHSRA 283 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC- 304 + V + N E + ++ Sbjct: 284 ELLELTIDEVWTGMSSANEPWLWAPENKVWNGEVRLSGRTGKEAWHQRTVIPILDDLGGV 343 Query: 305 --LLYMVRIYHRSEWLN 319 + + + Sbjct: 344 EKYICIDIDITDRKEFE 360 >UniRef50_C6MQF9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MQF9_9DELT Length = 705 Score = 615 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 95/604 (15%), Positives = 211/604 (34%), Gaps = 25/604 (4%) Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLG 209 + ++ + + + + + + + + + + L R +A Sbjct: 87 IVAVTAHSETSYLLDAIEIGMDHYLLKPVNYPELFRILDRVGEKLTLRRLVARQVAALRA 146 Query: 210 KEKRAFTLSWLAALSVLLLLL------CTPYENDFIAGYLVPVFFIIFTL--GVGKLRYP 261 E+R T+ + + L G+ G+ Sbjct: 147 SEQRFSTIFQATPDLLSIASLQDGRLVEVNEAFLRALGFDRQEVIGRTPEELGLWLDAGE 206 Query: 262 FLNLTWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVLISFSVCLLYM-VRIYHRSEWLN 319 L A++ + E + L + + L Sbjct: 207 PAALLQALAEKGAVRDLEVRLKAKNGQELEGLVSADSIEMEGNPFLLTLFKDISERKRLE 266 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + QA DPLT LPN + + + L +D+ + ++ G Sbjct: 267 QIIKHQAQHDPLTDLPNRKLFMDFLALELAQARRNKKSLAVLFLDLDHFKQINDTLGHAA 326 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 ++++ + L ++E++ + ++ G E +++ + +V+ + Sbjct: 327 GDLLLQAVAQRLKRCVRESDTVARIGGDEFNVLMPDLAQTDDVGTVVSKIMGVFGPPFRL 386 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + F + E+ + LL + + + + ++ +T + Sbjct: 387 EGIEVQASTSLGVSMFPDDGESCEELLQKADGAMYVAKQSDGN-SYQFYNDEINARTVSR 445 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + +R A+ +G+L L QP+ N + +L + G++ P +FL + + Sbjct: 446 QNMEMRLRQAVSRGELELVYQPLLNLGTGRISAAEALLRWHHPERGLLFPAQFLTVAEET 505 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 V+ + +VNL N + ++P Sbjct: 506 GAIVPIGEWVIHQACTQMKEWQEQGLDLSLAVNLSNREFHHPNFLEMTMTALSETGLAPG 565 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 ++ ++I E NA + ++ +L + G ++DDFG G ++ +R+++L +KID Sbjct: 566 SLEMDIPERAIMDNASLPVKDMLRLTEAGVAFSVDDFGIGSSSLQRIRQLPIAKLKIDRS 625 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F++DI+T D +V ++ ++ + L V A VE Q AL+ G +QG LIGRP Sbjct: 626 FIRDILTEPGDLDVVSAMICMSHSLKLRVNAVGVEAPGQLALMEDYGCDEVQGDLIGRPL 685 Query: 726 PLAD 729 P A+ Sbjct: 686 PAAE 689 >UniRef50_Q2SNY4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY4_HAHCH Length = 994 Score = 615 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 105/577 (18%), Positives = 195/577 (33%), Gaps = 33/577 (5%) Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCT 232 + +TRMI S RD L ++ V L L Sbjct: 401 VSFDKLGRITRMIGSRRDISKEKSRDEQLLLA-----KSVFDHTPQGVFALDTEFRFLTV 455 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKL---RYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 I GY + R F + + + Y Sbjct: 456 NNAFSQITGYETEEVIGSSLEDFSQAPNKRQVFSRIRDELFLRGRWQGELYEKRKSGEFY 515 Query: 290 SLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + + + + + + + H D LT L N + Sbjct: 516 CQWLQITSIINTEGATTHYAGLFSDLTERKQADEKLHYLLNYDELTGLANRMLFRERLDK 575 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 EQ + L +D ++ G ++ + + L +L Sbjct: 576 ILRKVREQGLSINMLLLNVDRFRQVNESLGQDRGDELLKQVATRISQTASHAHTLARLGS 635 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E ++ ++ ++ L + + + + N +Q L+ Sbjct: 636 DEFAILTP-AKSRSQISRFCEQLLDELKAPFNIDGHEFYVSTSIGVTQAPDNGWEIQTLM 694 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q + Q+ + M+ + ++ + +R A+ + ++ QP + Sbjct: 695 QQANMAVRQAKYLGGN-TYEFYSRMLRSMSRMRLDVETELRRAIQNQQMEVFFQPKLSLD 753 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 G + + G++ P F+P+ + L Q+L + A + Sbjct: 754 SGRITGVEALARWRHPQRGLIAPSDFVPMAEESGLITELGEQMLGAACAQAAAWSREGLD 813 Query: 573 -PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 + SVNL L Q N+ + ++ + + P + LE+TE N + + + +L Sbjct: 814 NIQVSVNLSAHQLRQSNLPQMVRKVLQDTELPPHLLDLELTESTLMENMSRTQFMLSRLR 873 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 + G RI +DDFGTGY++ LKR + +KID +F+KD N DA I R++ L K+ + Sbjct: 874 EMGVRITVDDFGTGYSSLSYLKRFPLNALKIDRMFIKDAHHNADDAAITRAVIMLGKSLN 933 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L V+AE VE + L + G +QGYLI P Sbjct: 934 LEVIAEGVEHEGHLQFLRESGCHTVQGYLIAEPLGAE 970 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/316 (7%), Positives = 66/316 (20%), Gaps = 15/316 (4%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L+ + VL ++ +I + L F+ WR +L M Sbjct: 120 LSAAIATVLGPVAAYIILELPSSWLDSATIAQFVAAGLLSFFLGIWRTPFIILSAMPLLW 179 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 L L + ++ L L Q L Sbjct: 180 LSVLLSGRSPLPTELMTNAAILSVFLYPLAALWYLASSRYLNQNLQMQGLIAYLDNARSA 239 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + + +I + ++ + L++ I Sbjct: 240 SEQLNQQLAYEITRREEIEHELRETQKELE----NAICERTDELSEANRILSQQIKLRKN 295 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSV-----LLLLLCTPYENDFIAGYLVPVFFII 250 + + W + ++ + +I Sbjct: 296 ISDALMKSQTRLSQAIEATGLALWDWDIPRNSLYQSFFHDAFGPREMSATAFVERMHGLI 355 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL----ISFSVCLL 306 T ++R + +S + + + + ++ Sbjct: 356 HTDDRPRIRKEMMLCLKGLSN--TYRVQYRVTTAKDAWIWVEDCGKPVSFDKLGRITRMI 413 Query: 307 YMVRIYHRSEWLNRRW 322 R + + + + Sbjct: 414 GSRRDISKEKSRDEQL 429 >UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax sp. JS42 RepID=A1W268_ACISJ Length = 1108 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 104/569 (18%), Positives = 198/569 (34%), Gaps = 30/569 (5%) Query: 188 RMIVSPHFAQILW--RRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIA 240 R + R + V++ + ++ Sbjct: 526 RDAQALQTVADALWKHTAQRRQEAVIHRLSEALDQSPSPVVITDIDASIVYVNKAFSEVS 585 Query: 241 GYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 GY R + ++ + + Y+ L Sbjct: 586 GYGAQEVLGRNPRVLQSGLTPRTTYADMWTKLPRGLPWQGELINRRKNGQVYTENASLYP 645 Query: 298 LIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE------- 347 + + + + R + D LT L N +A ++ Q Sbjct: 646 VRDVFGEVTHYVAHMEDITQRREAEERIRALSNYDTLTGLLNKKAFDEQLTQAIDRADAS 705 Query: 348 -AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 S +DN + ++ G + + L + + + + G ++ Sbjct: 706 HERVSVLWFDLDNFKLVNETLGHAAGDELLLEMGNRLRACLAPHIPVARYSGDAFTAIVP 765 Query: 407 GPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + ++ + + + + A + + T L Sbjct: 766 -LADQAAVALLAQDALAQLQTTLQIHGHAVSVSASAGIAVYPDDARTASTLASAAEVAMY 824 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 + L + T + + L ++ A +G+L L QP R + G + Sbjct: 825 RVKQDGRN-GLRFFAPEMQAHTQRSLELAAGLKDAAHRGELFLVFQPQRTLGSGALAGAE 883 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNL 579 +L G+++P +F+P+ Q D V+E + + L +VN+ Sbjct: 884 ALLRWRHPRWGLVSPAEFIPIAEQSGSIVAIDFWVVEQVAQQLRAWDAAGLPPLVVAVNV 943 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + + ++R+ +R ISPQ + +E+TE A N E + I +LH+ GFR+A+ Sbjct: 944 SAAQFARPHFVEELVRILQRMDISPQRIEVELTEAVALKNPEQAETTIRRLHEVGFRVAL 1003 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR D +KID FV+++ D IV +I +A + ++ +AE V Sbjct: 1004 DDFGTGYSSMSYLKRYAIDKLKIDQSFVRELAHQASDQAIVTAIIKMAHSLRMATIAEGV 1063 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET +Q ALL G +QGY RP A Sbjct: 1064 ETAEQAALLQACGCDEMQGYWYSRPLEPA 1092 Score = 45.3 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 25/263 (9%), Positives = 48/263 (18%), Gaps = 19/263 (7%) Query: 83 FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYL 142 +L +V L A+ LG T + + Sbjct: 139 WLGRRSRYAGLLWVALLVGAVHYVLLGHPQWLPRTFTPEAGLTPFKVRFEYALATAYVLA 198 Query: 143 VGSFFDFPLKISTF----FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS-----P 193 F F A + ++ A + I++ Sbjct: 199 GVGFLTQLRHAREFGLSHLALASFTMAMSEIFFTLYANVTDVYNVAGHFYKILAYGFLYR 258 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 + E R + + Y + + L Sbjct: 259 GLFVETVQIPYLDLRAAEARQRATLNTLPDLLFEVDRKGVYLAVHANETSKLLTPLPQLL 318 Query: 254 GVGKL--------RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA--VLISFSV 303 G F L A T + + + + Sbjct: 319 GKTLDEALPPAAAAQCFEALAEAERTGMSRGQRITLPLPLGERHFELSVSRKSAVAGQPD 378 Query: 304 CLLYMVRIYHRSEWLNRRWHLQA 326 L + R + R +A Sbjct: 379 TFLMLSRDITPTVENEERIRSEA 401 >UniRef50_C6P3U3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3U3_9PROT Length = 600 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 95/438 (21%), Positives = 179/438 (40%), Gaps = 41/438 (9%) Query: 321 RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 + A D LT LPN + + L +D + ++ +G + Sbjct: 159 QIKRIAHYDSLTALPNRLLFLDRLDQEVARANRDDQMVAVLSLDLDRFKKVNESFGHPVG 218 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR----QIHW 428 ++++ + L ++ + + ++ E +VL+G + + + I Sbjct: 219 DQLLQTVAKKLSSQIRACDTVARIADDEFAIVLTGVKATHAAGEVAQKILDSFAHSPISI 278 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 +++ + + + + LL Q+ ++ + ++ Sbjct: 279 SDSEVFITLSIGISIYPVDGVNTTALLKSADTALHQAKREGRN-NFQYYTVQMNATSWQR 337 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L +R AL + + L+ QP + + G + +L + G++TP +F+PL+ + Sbjct: 338 LKLETELRQALARNEFELHYQPKVDMDCNKIVGMEALLRWQSAERGLVTPAEFIPLLEET 397 Query: 546 NLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL K +VNL L Q + AG ++++ + + + P Sbjct: 398 GLILPVGEWVLREACKQARAWQDAGIPDVHIAVNLSSLQFRQPDFAGSVLKIMQEHGLDP 457 Query: 605 QAVILEITEEQAF-------------SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 A N ++ + LH+ G R +IDDFGTGY++ Sbjct: 458 -----------AMNGIELELTESLLLDNVARTIDTLNTLHEAGIRFSIDDFGTGYSSLSY 506 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR +KID FV+D+ +N D IV +I L ++ LSV+AE VET +Q A L ++ Sbjct: 507 LKRFPISSLKIDQSFVQDLSSNRDDESIVSAIIALGRSLGLSVIAEGVETAEQSAQLRRM 566 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGYL RP P+A+ Sbjct: 567 GCDGMQGYLFSRPVPVAE 584 >UniRef50_C3MGT7 Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain n=1 Tax=Rhizobium sp. NGR234 RepID=C3MGT7_RHISN Length = 928 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 116/758 (15%), Positives = 236/758 (31%), Gaps = 47/758 (6%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW- 61 + + I L FT ++ + I I ++ + + F+ Sbjct: 174 LAATAAMTLGIVVLHFTAMGA---VTMEVEFATGIQEGMIQPHFLAFVLAGTAFFLLSAV 230 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 + + + +++ + W G G T+ + Sbjct: 231 LIAAGFARHAEILAVASEKEFSRFVGSVKDYAIYMLDVDGRVASWNAGAEANKGYTAEEI 290 Query: 122 WQRLFWLGLVTP--IGIKCSMYLVGSFFDFPLKISTFFGDADAI-FTVVDLLSLFTAVLI 178 + F + L + + + D F ++ Sbjct: 291 VGKNFACFYSPEDQAANLPARALRIALEAGQYETEGWRYRKDGTRFWAHVVIDTIVGEDG 350 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTP 233 + F + + I + L L + Sbjct: 351 GHAGFIKIAKDITKRKEDADRIAEVSKNL-------DIALENMTQGICLFDHADRLLISN 403 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFL-----NLTWAVSTLCLLNYNQNFLQGVETE 288 I + T R + A S + + Sbjct: 404 RRCLEIFELPESLAGFGLTFREVLDRMCARTYPDPAVAEAKSEAAYRKHRLEIAGKGGGD 463 Query: 289 YSLAFI-LAVLISF-----SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + ++ + + A D LT LPN Sbjct: 464 FVEKLSNGRSILVKHRTLPDGGWVSTYEDITERLDSEEQISFLARHDSLTGLPNRLQFNS 523 Query: 343 APEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 ++E + + +D + ++ +G + +I + + +QE E + Sbjct: 524 HLDEELDAAVWFSRKVAVIGIDLDKFKEVNDLHGHAAGDFVLVTIAQRMKEHLQEGEFVA 583 Query: 395 QLPGSELLLV--LSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 + G E V + ++ + + L G + + ET Sbjct: 584 RFGGDEFAAVKRFEDLSEVHDFLRRIETCLQEEMRFGDFELKSGGSMGVAIYPQDAETAD 643 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI- 511 L+ ++ A + E + + L N + A+++ +L L+ Q Sbjct: 644 TLINNADLAMYRAKAA-LNQTICFYEVSMDEAARGRRALANDLWEAVERSELALHYQVQK 702 Query: 512 --RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + GY+ +L + G++ P++F+PL + VL + A+ + Sbjct: 703 SVTTGDVIGYEVLLRWNHPERGLVPPNEFIPLAEECGAILPIGEWVLRQACREAASWDAE 762 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + +VNL P+ L ++ + + + + + LEITE + E ++ + Sbjct: 763 Y---KIAVNLSPVQLANGDVVSLVHSILVETGLDAKRLELEITESTIIDDKERALLTLRA 819 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 + G IAIDDFGTGY++ E L+ D IK+D F+ ++ + I+R+I L + Sbjct: 820 IKALGVTIAIDDFGTGYSSLETLRAFPFDKIKLDKSFMSEVEGSPQAKAIIRAILALGHS 879 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + V+AE VETQ+Q +L G QGYL+GRP P+ Sbjct: 880 LQVPVLAEGVETQKQLDILQAEGCDEAQGYLLGRPAPI 917 Score = 98.9 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 26/334 (7%), Positives = 67/334 (20%), Gaps = 22/334 (6%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 + I+ F + + S + + + ++ Sbjct: 50 LGAAGIASGFGIWATHFIAMLAYDPGVVLGYHTSLTTLSLVVAILLTTTALAIAT----Y 105 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVV---LCACAILRWQLGTRWRYGLT 117 +G L G + FL A + L ++L L Sbjct: 106 AKGRPAWLLGGLVLGAGVGCMHFLGMAALELPGFIRWDRTLVVASVLAGVLFEMVAIFAI 165 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF-----PLKISTFFGDADAIFTVVDLLSL 172 R + +GI + F + Sbjct: 166 KRDQSKAQLAATAAMTLGIVVLHFTAMGAVTMEVEFATGIQEGMIQPHFLAFVLAGTAFF 225 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 + ++ F ++ ++ + R + + A Sbjct: 226 LLSAVLIAAGFARHAEILA--VASEKEFSRFVGSVKDYAIYMLDVDGRVASWNAGAEANK 283 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 Y + I G F+ A + T + Sbjct: 284 GYTAEEIVGKNFACFYSPEDQAANLPARALRIALEA----GQYETEGWRYRKDGTRFWAH 339 Query: 293 FILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 ++ ++ + + + + + R Sbjct: 340 VVIDTIVGEDGGHAGFIKIAKDITKRKEDADRIA 373 >UniRef50_A0Q1B8 Diguanylate cyclase/phosphodiesterase domain 2 n=2 Tax=Clostridium RepID=A0Q1B8_CLONN Length = 961 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 107/560 (19%), Positives = 204/560 (36%), Gaps = 35/560 (6%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVL--------------LLLLCTPYENDFIAGYL 243 I + ++ + + ++ L ++ + I Sbjct: 389 IALEKSKETLEKGRQKYKLVVDGSNDAIWEWDIKEDKLFMSNKLNIIKGSSKYTDINENK 448 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 II K+ F + + ++ L E L Sbjct: 449 RYFSKIIKEEDYKKIIEKFKEILY--KNENYIDVECRILDEFNYENWFNIKGKALRDGEG 506 Query: 304 CLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 +L + + ++ A D LT LPN A + + + Sbjct: 507 NVLKIAGSITDITDRKEAIKKIEYLAYNDSLTGLPNRVAYSRDIYGIIQNVKKDNKIGAI 566 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L IDN + ++ G ++ + + + ++ E+E+ Y+L G E ++V G E Sbjct: 567 MFLDIDNFKNVNDTLGHDYGNELLKKVNKRISNILTEDERFYRLGGDEFIIVQCGSYNEK 626 Query: 413 RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 ++ + + + S+ N + F + LL + Sbjct: 627 DIELLADNILKLFSKSFIVKNEHIYTTVSLGISFFPKDSCDQSVLLKYADTAMYSAKNLG 686 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + +S ++ L +R A+++ +L L QP N E +G + +L Sbjct: 687 K-SKYLIYNKEMSSNLIRRSQLEEGLRHAIERKELKLVFQPQVNANTGEIKGVEVLLRWN 745 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLL 585 G ++P +F+ + + L VL + K SVN+ + L Sbjct: 746 SEKFGFVSPSEFIVIAEKSGLINSIGEWVLRESCLKRKQWQIENLKDITISVNVSVIQLQ 805 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + ++ + ++ + P+ + LEITE + E+++ + + G +IA+DDFGTG Sbjct: 806 QDDFIEKLKEILEKTKLPPECLELEITESVMMESKETNLDILNSIRDIGVKIALDDFGTG 865 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK L + IK+D F+ I N D IV I DLA L+V+AE VE +Q Sbjct: 866 YSSLSYLKMLPINKIKLDKSFIDTIHINKNDKFIVEGIIDLAHKIGLNVIAEGVELNEQL 925 Query: 706 ALLHKLGVQYLQGYLIGRPQ 725 +L + +QGY +P Sbjct: 926 DVLCEANCDEIQGYYFSKPV 945 >UniRef50_Q1JZ53 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ53_DESAC Length = 946 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 100/573 (17%), Positives = 204/573 (35%), Gaps = 38/573 (6%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEND 237 R I + ++ T+ + VL+ ++ Sbjct: 374 VLSSVRDIRERLEKEEQLKQ-----------LMTVVENSNDGVLVTDVTGSIIAVNRAFC 422 Query: 238 FIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 I+GY + + + ++ Y Sbjct: 423 RISGYDEEDVLGKTPRMFQSGIHDKSFYQAMWNELAQYGQWQGEIWNRNKDGESYPEMLS 482 Query: 295 LAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-- 349 + L + + + + L ++ A TDPLT + N +Q Sbjct: 483 IRALTDDAGTVYRYVGIFADLSNEKALEKKVLHLAQTDPLTGMANRVLFRDRLQQAIKHA 542 Query: 350 ------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D+ + ++ G ++ + + + L ++ + + G E L Sbjct: 543 QRHVTTLAVYSLGLDHFKKINDSLGHVIGDKILIEVAKRLKKCLRGEDSFCRHSGDEFTL 602 Query: 404 VLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 + G + + + + + L + F + L+ + Sbjct: 603 MTYGGADAMDASTVATKILNAIRLPFIVDGSELFLTASIGIALFPRDSSDDLGLMQKAEN 662 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GE 517 QS + S Q + + L N + AL++ +L LY QP + E Sbjct: 663 AMHQSKKNGRD-CFCYFSREFSQQAEQALHLTNMLHKALEKEELQLYYQPQVDLESRAII 721 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 + +L + G ++P + +P+ + L VLE + + + +H K + Sbjct: 722 AAEALLRWHNDEMGWISPAQMIPIAEESGLILPIGQWVLEQVAQQIRSHYETNKEWLPIA 781 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ + + ++++ + I + + LE+TE ++ E ++ + +LH G Sbjct: 782 VNISVKQFITDDFIEMVMKIIDAHAIPARCLELELTESLMLADVELAVKKMGELHTLGVP 841 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +A+DDFGTGY + LKR + IK+D FV DI + DA + +S+ + ++A Sbjct: 842 LALDDFGTGYTSLAYLKRFPVNKIKLDRAFVTDIHHSKGDAALAKSLVAFTREMEFELIA 901 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E +E + Q L +G +Y QGYL RP P + Sbjct: 902 EGIEEEIQGEYLKAMGFRYGQGYLYSRPLPKEE 934 Score = 62.7 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 12/171 (7%), Positives = 33/171 (19%), Gaps = 8/171 (4%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + + + +L + H + + L Sbjct: 226 LPARDLYLEVVASLMTVQGAQKIQFLLHDVSDVHRYKEKLESLSVELKNSLRTYQDLFNT 285 Query: 221 AALSVLL-----LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 A +++ L + GY V K + + + Sbjct: 286 VADGLVVRDVNGHFLMANQAFLSLLGYREEELIGTHCTKVCKDKNC--ERFAEILQGRTI 343 Query: 276 NYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + ++ +L VR + Sbjct: 344 VFKSTHTTRNGEKIPVEVNSTLVSFKGDTAVLSSVRDIRERLEKEEQLKQL 394 >UniRef50_C1F295 Cyclic diguanylate phosphodiesterase/diguanylate cyclase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F295_ACIC5 Length = 806 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 126/748 (16%), Positives = 238/748 (31%), Gaps = 46/748 (6%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG--WRGVVPVL 68 + + L LI S I + L P+ + ++ V L Sbjct: 59 LGVSALLLAGCSFLIASSDAIHDPGEAMIAASLLGVPPIAYLCLTVYGVSTVPVLVAVAL 118 Query: 69 CGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW-----Q 123 G C + ++ G+ +L I+ + G+ Sbjct: 119 VGQLCMIYVSLRYWGADRGIVRGNMVIALLIMLWIVYEIRAGQAILGVYGTLTEIFAINA 178 Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 +W + L + + ++ L + Sbjct: 179 WFYWRDFRRASAGVLTAVLGLLAWALVFPAALVVAAWWPHL-------HVSSELWNIPKY 231 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL------CTPYEND 237 + MI L +I + + L + + L Sbjct: 232 FVEFGMI------LTLLEEEIQAANRTSEDYRVLFENNPSPMWIYDLETLRFLRVNDAAQ 285 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFIL 295 + GY F + + + L + + + + + Sbjct: 286 HVYGYSEEEFRQMTLMDIRPQEEVPRMLEDVGLEREEMVFSGPWTHVYKDGRQSKVEVAA 345 Query: 296 AVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + +V E L+++ QA D LT LPN L+ Sbjct: 346 HTIHFNGRMARFCLVVN-VTEREELHQQLLYQAHHDLLTGLPNRLLLKDRMQQTLTRASR 404 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 Q+ +F C+ +D + ++ +YG ++ C++ + L ++ + + + G E + VL Sbjct: 405 QDRRVAFVCIDLDRFKQINDNYGHLVGDQCLKLVAERLRRRLRGEDTIARSGGEEFVAVL 464 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 ++ + L L++ + + L Sbjct: 465 GELKSRQDAYRVAEDLLYVFHEPFLVEGYRLELPASIGVALYPDDGTDASDLWRNADIAM 524 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYD 520 +S + +S + L +RTAL +G +Y QP + G + Sbjct: 525 YRSKKSGGNR-FTFVSDEISSAAAEANDLELMMRTALKEGGFEVYYQPQYLEDGTLCGME 583 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNL 579 +L G++ PD+F+P+ L VLE + + R +VN+ Sbjct: 584 ALLRLHHPRSGMILPDRFIPVAEDSGLIMPIGNWVLEEVARQFMAWSQAGLPQVRIAVNV 643 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 PL + + G + R+ R + + + LE+TE N E + +L G ++ Sbjct: 644 SPLQFMHSDFLGHVQRVLARSGMPAELLELEVTETTVMRNIEEIARQMRELAALGVHFSV 703 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L +L +K+D FV+ I IV++I LA + + VVAE V Sbjct: 704 DDFGTGYSSLRHLHQLPIKTLKVDRSFVERITETNGTYSIVQAILSLAHSLGMQVVAEGV 763 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPL 727 E + Q +L L QGYL P Sbjct: 764 ERKDQFEVLKALQCDVFQGYLFSYPLEA 791 >UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TT69_ALKMQ Length = 1242 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 105/609 (17%), Positives = 213/609 (34%), Gaps = 30/609 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 FD +I G I+ VV++ L + + I + Sbjct: 473 FDMEFRIIRPDGSVRHIYQVVEMTFDLEGHLT---YRRGIIQDITERKALVKKMQGIQEN 529 Query: 207 SLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFII--FTLGVGKLR 259 +KR L ++ + + + I GY + Sbjct: 530 INHIQKRFQVLIRDSSDVFEIVSPDGTIEYISPAVEKILGYQPKEMEGRNLMEFAWEIEK 589 Query: 260 YPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV--CLLYMVRIYHRS 315 + + + + + + + ++ R Sbjct: 590 PKLEKMFKVALSEPNKNIKREISAETKLGKRIYVELTMNNQLEEPSIKGIVLNWRDVTER 649 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHY 367 ++ + A D +T LPN E +A E+ + L ID+ ++++ Sbjct: 650 VEAQKKMNHIATHDQMTQLPNRLHFEKKIEYQCQEAKEKGTTFAVMMLDIDDFKYINDAL 709 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 G+ I R L + E + + G + +++ + +++ + S Sbjct: 710 GMGFGDQLITQAARRLKDFLGETRCICRYSGDQFGILIYNLKDIEAYKNIAMKIIDLFSS 769 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + + + Q L+ + ++ + + + Sbjct: 770 SFKIDPYEIYITMSVGVAIYPDDGQETQSLIKHGNIALFRAKEAGKNR-YEMYSPKMDVK 828 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 K L N +R A+ + +Y QP N + G + ++ G+++P +F+ L Sbjct: 829 NYKAFTLKNDLRRAIKNNEFKVYYQPQVNLQTSEIIGAEALIRWEHPTWGLVSPKEFISL 888 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +L + + D + SVN + QK+I I + Sbjct: 889 AEETGFIITLGNWILRQVCETYQKWLKDGLPAIKVSVNYSGIQFFQKDIVENIKNTIHEF 948 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P +++EITE + ++ +I+ L + G ++AIDDFG G+++ L DI+ Sbjct: 949 QLDPHFLVMEITETVLMNQSQQVSADIQSLQELGIKVAIDDFGAGFSSLTYLNSFNVDIL 1008 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+K I + I+ ++ +LAK + +VAE VET Q + L KL QG+L Sbjct: 1009 KIDRFFIKGIPLDETSNRIIEAVINLAKDLRIRLVAEGVETWDQLSYLRKLNCTVGQGFL 1068 Query: 721 IGRPQPLAD 729 RP P D Sbjct: 1069 YSRPVPQED 1077 Score = 49.6 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 10/149 (6%), Positives = 36/149 (24%), Gaps = 5/149 (3%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS-VLLLLLCTPYENDF 238 + + I + + ++ A SW + Y Sbjct: 376 VIGILGTIQDITENKLLKTQLEKSYKNLAEAQRLAKMGSWEMDVIRNKNTWSEEYYHIYG 435 Query: 239 IAGYLVPVFFIIFT-LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 I + F + R ++ + + ++ + + ++ + Sbjct: 436 ITNKEYDGSYEAFLNFVHPEDRELIEDILAHPPQVQPFDMEFRIIRPDGSVRHIYQVVEM 495 Query: 298 LISFSVCL---LYMVRIYHRSEWLNRRWH 323 L +++ + L ++ Sbjct: 496 TFDLEGHLTYRRGIIQDITERKALVKKMQ 524 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 110/534 (20%), Positives = 204/534 (38%), Gaps = 40/534 (7%) Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 + + G +V + F + + P L AV + N Sbjct: 287 ELLEESQRLGNSVGWIVLGTIVLLIFALLISMNVLMVRPLKQLMGAVREIGRGNLAPT-- 344 Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 +A + + L + E R A D LT LPN + Sbjct: 345 --------IALSTSDELGKLG--LSFQEMAGNLEKSRVRVERLAYHDSLTGLPNRFRAHE 394 Query: 343 APE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK-- 392 + + L +DN + ++ G + + + L +++ + Sbjct: 395 TLRCMISLAHRESRRMAVLFLDLDNFKRVNDTLGHQVGDQLLMEMAIRLQVVLRAEDVIH 454 Query: 393 ----------LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGA 439 L +L G E +++LS + + + + ++N + G Sbjct: 455 QEVSQNTLDVLARLGGDEFVVLLSNVSSSRDAAKVASRILDIMKLPFYFNENEIYSGCSI 514 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + + L+ + Q+ + + + + L +R AL Sbjct: 515 GISLFPSDGSDVDDLIKRADAAMYQAKSQGRN-NFQFYSASYNLAALEHISLEGRLRRAL 573 Query: 500 DQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +L+LY QP+ + G + +L GI+ PD+F+P+ + L VL Sbjct: 574 KNNELVLYYQPLVQARTGKIVGLEALLRWNDPLDGIIPPDRFIPVAEESGLILPLGEWVL 633 Query: 557 ESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + L+T SVN+ + L ++++ + ++ K + P + LEITE Sbjct: 634 REAGRQLSTWHAAGFTDACVSVNVSAIQLQRQDLVTIVDQVLKDNGLRPWQLELEITETA 693 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + ++ + + G I++DDFGTGY++ L+ L +KID FV+D++ + Sbjct: 694 LMRIRPEVIGDLNAMRRKGVTISLDDFGTGYSSLSLLQELPIGKLKIDKSFVRDMLVDPK 753 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV ++ +AK+ L AE VET +Q A L + G LQGYL+ RP P+A+ Sbjct: 754 DAAIVSAVLFIAKSLGLQSTAEGVETPEQAARLAEEGCDQLQGYLLCRPLPVAE 807 >UniRef50_A1TQ27 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=5 Tax=Comamonadaceae RepID=A1TQ27_ACIAC Length = 962 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 128/740 (17%), Positives = 228/740 (30%), Gaps = 39/740 (5%) Query: 20 LTVVLIQLSRF---ISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNL 76 + L L P ++ P+ I GW + + L Sbjct: 221 GALALSGLWSVGGDDDPGLMMFLPVYAGGGTPVTQEARRAAIRGWVAAPFRVAAVAGALL 280 Query: 77 WNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGI 136 A A + +R +RL + I Sbjct: 281 GELDPGVSLRIQDG----LAGGGADADVGELYNSRDAAEPAPHLSGERLRAARV----LI 332 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + P D A+ + L A M R + Sbjct: 333 VGGRPWTLTMEPLPAFDHRLGRDNYALIAWLGALFSVLAGWFIAMQATGHQRALALAQSM 392 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 R G + L + + + ++ + Sbjct: 393 TSELRTARDNLEGILQAVPDLLVELDAGGRIHYHRSARSDLSAEPSQAFEGRMLAEVLPP 452 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---------FSVCLLY 307 + F+ + + Q + +A + + + Sbjct: 453 GVASEFMQALREAESQGVSLGRQYHQDTAMGQRWFELSVARRLGVDSAAGQGGGASRYVA 512 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDN 359 + R H A D LT LPN R L + + + + +DN Sbjct: 513 LARDITARRDAEAAMHRMAYYDALTGLPNRRLLFEQLQDALDQARSGGRIGALFFIDLDN 572 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET-----EGRL 414 + ++ G + + R L L+Q + ++ G E ++++ Sbjct: 573 FKQLNDARGHAAGDRLLVQVARRLERLLQGFGSVVRIGGDEFVVLIPRIANGMQAGVDAA 632 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 M L +T + F ET++ LL + ++ + Sbjct: 633 GAMAARLREGMEAPYDLGSTYYSVTASTGVTLFPKAGETVEDLLREADTAMYRAKSSG-A 691 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYD 529 + E + +++ L + A+ L ++ P + G + +L Sbjct: 692 HRVRFFEADMQAAAQERLSLEQDLAQAIADDALEIHIHPQVDRDGAVCGGELLLRWRHPA 751 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G ++P +F+ + + L R +V+ LA SVN+ Q++ Sbjct: 752 HGNVSPARFVAIAEESGLILRLGARVIRRACDALAQLHAAGLDMTISVNVSARQFRQEDF 811 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + +ILE+TE N + + + +L +FG R +IDDFGTGY++ Sbjct: 812 VAYVRDALAYSGAPASRLILEVTETLLVENWQDTARRMAELVRFGVRFSIDDFGTGYSSL 871 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL +KID FV+D N DA IVR+I +A+ L VVAE VET+ Q L Sbjct: 872 AYLKRLPLYELKIDRSFVQDAPVNPNDAAIVRAILSMAQHLRLRVVAEGVETETQAEFLA 931 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G +QGYL P PL + Sbjct: 932 RHGCDAMQGYLYAHPLPLKE 951 >UniRef50_C5V0J9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0J9_9PROT Length = 1321 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 84/548 (15%), Positives = 191/548 (34%), Gaps = 44/548 (8%) Query: 215 FTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLT 266 + A+ +V++ + I GY + + + Sbjct: 773 DVIFNAASEAVMVTDANRRITSVNRAFIKITGYAAEEMIGQTPKLLSSGVHTQNFYDAMY 832 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWH 323 ++ + Y + + + + +++ + Sbjct: 833 ASLEASGYWAGEIWNRRKNGEIYPQWGSITAIFGELGDLRSYIAVFSDVSKAKQAEEHLY 892 Query: 324 LQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT L N + + +D + ++ G + Sbjct: 893 HLANHDSLTGLANRSKFVDYLNHTLDLARRNRGHKVAVAFIDMDRFKIINDTLGHTIGDQ 952 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT 431 +++I + + + L + G E +LV+ + + V + + + + Sbjct: 953 FLKAIATRISSQCRNEDLLSRWGGDEFVLVMDRVDGPDSVAEAVRRMMEVVRKPLLIDGH 1012 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 L+ F + + L+ + + E+ + ++ K+ + Sbjct: 1013 ELEPTLSVGISFFPDDAQNTTDLVKAADTAMYRVKENGRN-GYAFFTELQADESKKKFEI 1071 Query: 492 LNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 ++ + AL + +L QP E G + ++ + G ++P F+PL + + Sbjct: 1072 VSELNRALRLNEFVLNYQPQVKPDTGEIVGLEALIRWEHPERGYLSPANFIPLAEELGMI 1131 Query: 549 ARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 + V++++ + ++ PR +VN+ P L +A + R Y ++ + Sbjct: 1132 NQVGEWVIKAVCQQMSAWKLGGVTYPRVAVNVAPSQL-DSGLADYVQRTLALYGLTADCL 1190 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 +E+TE ++QL + G ++IDDFGTGY++ LK + KID FV Sbjct: 1191 EIELTEGAL-ERGGEVAPVLKQLRELGITLSIDDFGTGYSSLGHLKNFPINCFKIDKSFV 1249 Query: 668 KDIVTNTLDAMIVRSITDLAKAKS-------LSVVAEFVETQQQQALLHKLGVQYLQGYL 720 + + DA IV++I L + + + +A Q+ L +G + +QGY Sbjct: 1250 DGLPDSVQDAAIVKTILTLGENLNVEVVVEGVETLA-------QRDFLTSIGAKIIQGYC 1302 Query: 721 IGRPQPLA 728 G+P + Sbjct: 1303 YGKPLSVE 1310 >UniRef50_Q2SKH9 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKH9_HAHCH Length = 999 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 98/658 (14%), Positives = 206/658 (31%), Gaps = 44/658 (6%) Query: 115 GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 + L L+ + + +++ T +L Sbjct: 328 ARLVLRTALWIGGLVLIAGTVGIFLLVTFNNRLKNRVELHTHQLREANQALYEQTQTLME 387 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRD-------IAPSLGKEKRAFTLSWLAALSVLL 227 L + L + A ++ + + V++ Sbjct: 388 KEQALYKLNHALEARVEERTEALAQANQELKLEIAEREQRELSLRLLSKAVESSRSGVII 447 Query: 228 L-----LLCTPYENDFIAGYLVPVFFIIFTLG--VGKLRYPFLNLTWAVSTLCLLNYNQN 280 ++ + GY F + + ++ + Sbjct: 448 TNADGIIVYVNNAFLAMTGYDRMQVFDKHISSLEERVCFPRLDQINFRELPEPMIRDELH 507 Query: 281 FLQGVETEYSLAFILAVLISF--------------SVCLLYMVRIYHRSEWLNRRWHLQA 326 ++ + + + + A Sbjct: 508 CYDASRNQHWAQISIFPIYEQAARNYGVFRPAPEKVSHYVVTCEDITLLKKSKDEMEQLA 567 Query: 327 LTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT L + + E + + + ID+ + ++ +YG +++ Sbjct: 568 FYDHLTGLESRLLFKLRLENAITRAVRDKSMIALMFIDIDHFKEINDNYGHDAGDEVLKT 627 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDM 435 + + +++N+ + ++ G E ++LS + + + +R + + Sbjct: 628 VAARIKQNVRKNDTVARISGDEFTVILSDIRGHVDARRVAQGIRRTLNRPFKFAGKEYIV 687 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G + L LL Q+ + + ++ + K+ L + Sbjct: 688 GASIGISIAPDDGVELDELLKNADTAMYQAKRNGRND-IQFFSHSMNEEAKKKQTLEAEM 746 Query: 496 RTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 L + L QP+ + + G + +L G++ PD F+PL + L Sbjct: 747 IQGLSKKQFRLDYQPVIDLETKKLVGLEALLRWNHPSQGVIYPDHFIPLAEETGLIVELG 806 Query: 553 LQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ ++ ++N+ L K + I R+ P + LE+ Sbjct: 807 KWVINEVISATRELRKMGFSDVGVAINVSARQLRDKGLIADIGRIVAANRNEPCNIQLEL 866 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE E S +I L+K GF I +DDFG GY++ LK+L D IKID FV +++ Sbjct: 867 TEATIIEELEQSNRSINDLNKLGFGITVDDFGAGYSSMSNLKQLPIDCIKIDKSFVHNML 926 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV+++ +A L+VVA VE +Q L + QG+ + L + Sbjct: 927 RKGDDAEIVKAMISMAHNLKLNVVAVGVEDAEQVKFLKENKCFLAQGFYFSKAGDLHE 984 >UniRef50_C5SBC3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBC3_CHRVI Length = 1147 Score = 613 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 117/722 (16%), Positives = 232/722 (32%), Gaps = 48/722 (6%) Query: 43 FLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA 102 PL ML+ + + +C + + LS + T V + Sbjct: 426 LARGQPLRDMLTAIVAYIEEIAPHAICSIHLLDPETQTLSTAAALRLPEFYTRAVEGSRV 485 Query: 103 ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP--IGIKCSMYLVGSFFDFPLKISTFFGDA 160 L G+ +T + V + L P + M + I G Sbjct: 486 GLGV--GSCGTAAVTGQRV---VIADLLSHPDWSAYRDLMLQTPLRACWSQPIIGHAGQV 540 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + + + M I R + E++A L Sbjct: 541 LGTVAIYATRVMEPSPADLEM-----IESAAELAAIVIERDRAENATRQAEEKARLLLES 595 Query: 221 AALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKL-----------RYPFLN 264 + L L + GY + P L Sbjct: 596 TTEGIFGLDLEGRVTFINPAAANMLGYEPETLIGQPVHPLIHHSRANGLPLPPECCPILA 655 Query: 265 LTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRW 322 + + + + + + + + Sbjct: 656 TLQQGQDCHATSEVLW--RRDGSCFPAEYWATPVRRDHRIEGAVVTFHDISARQRAEAEI 713 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT LPN ++ + + L +D+ + ++ G + Sbjct: 714 QHLAFHDSLTGLPNRLLFKEELGQALAALRRDDQRFALHMLDLDHFKDVNDSLGHPVGDE 773 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNT 431 +R++ L + + + L + G E L+ S G + + + + Sbjct: 774 LLRAVAERLTAITRGTDVLARFGGDEFALLQSKIGEIGDAAALATKIIEAFGQAFWIDGN 833 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 +D+ D + ++ + ++ + ++ Q +++ + Sbjct: 834 RIDINTSIGILIADQACHDVDDIITRADVALYKAKEAGRG-THAFFADSMTQQLRREMEI 892 Query: 492 LNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 + A+ +L + QP + G + ++ G+ P FLP+ + L Sbjct: 893 ARELIQAIQNDELFIDYQPQFDLDSGRLVGMEALVRWHHPREGVRQPAAFLPVTEKRGLI 952 Query: 549 ARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 VL++ + R +VNL + + I+ + ++ P+ + Sbjct: 953 RPLSDWVLKAACCQIRDWSDRGLEFGRVAVNLCAQQVGDPDFGDNILAVLEQTGARPEHL 1012 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LE TE + + +I +L + G AIDDFGTG+++ + L++ + D IKID F+ Sbjct: 1013 ELEFTETVLIAADARTQADIARLSELGIHFAIDDFGTGFSSMQYLRKFRTDKIKIDREFI 1072 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +D+ + DA IV++ L A L +AE VET++Q L + G + +QGYL GRPQ Sbjct: 1073 QDVTQDAGDAEIVKATIALGTALGLITIAEGVETEEQAEFLRRHGCRQVQGYLYGRPQSP 1132 Query: 728 AD 729 D Sbjct: 1133 ED 1134 Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 22/240 (9%), Positives = 53/240 (22%), Gaps = 28/240 (11%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 WL L T G+ + L+ ++ + + I + + + + F Sbjct: 207 RLWLELATITGLFVVISLIAAWQTRRIALQERLDTQSCIDYLEQAIHTAADITAEELRFR 266 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA-----LSVLLLLLCTPYENDFI 239 + + R+ E+R TL ++ + V + + + Sbjct: 267 EFQTIAQAASTMIAQRRQAEQALRESEQRFRTLVEVSQYYIQEIDVEGCIQYANPASAHL 326 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN-----YNQNFLQGVETEYSLAF- 293 G + L + T Y L + Sbjct: 327 LGLEPKDLIGRNVSMLLPADER-ATLLKDLRTFASEQPTPSAYYNRNLTANGQTIDVEVG 385 Query: 294 --ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN-FRALEQAPEQEAGK 350 + + + + R L N + + + Sbjct: 386 WNYKRDESGQVTGFISIAKDVTDYQRA--RL-----------LLNGRNRVLEMLARGQPL 432 >UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VBK7_DESVV Length = 1413 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 103/436 (23%), Positives = 174/436 (39%), Gaps = 21/436 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMS 364 + + AL D LT LPN L + EQ + + +D + ++ Sbjct: 957 ERKQNEEQLTYLALHDSLTGLPNRTLLLERIEQARLRSLRGKGRSFAVMMIDLDRFKIIN 1016 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 +G + ++ + + P+++ + + +L G E ++L T + H+ + Sbjct: 1017 DSHGHAVGDRLLQMVSAAVRPVLRPADTVARLGGDEFAILLEDVATPREVVHVARRVIKA 1076 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 R N L + LL Q+ + Sbjct: 1077 VERPARVANKLLRTSASVGIVLRTDGYGSADELLRDADIAMYQAKEQGRGR-FRVFNRTM 1135 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKF 538 Q + L N + AL G L QP+ + G++ ++ G++ P F Sbjct: 1136 HQQAMDAMNLENDLGAALRWGQFELDYQPVFDTRSRALLGFEALVRWRHPLRGLIPPTAF 1195 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIR 595 +P+ + + R VLE+ L LA +VN+ L Q + G + Sbjct: 1196 IPVAEETGIITRLGHWVLETALTALARWRLQIPGIDDLYVAVNMSALQFAQPTLPGSVRD 1255 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 ++ + + +EITE + +++ I L G I IDDFGTGY++ L+R Sbjct: 1256 ALQKTGLPASCLKVEITETAIMQDPTTALQRISALRDLGVGIGIDDFGTGYSSLAYLQRF 1315 Query: 656 QADIIKIDGVFVKD--IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 D +K+D FV + IVR++ LA + SL+VVAE VET++Q A L LG Sbjct: 1316 PVDTLKVDRSFVSQSTTPEGEGNREIVRAVVVLAHSLSLAVVAEGVETEEQFAFLAGLGC 1375 Query: 714 QYLQGYLIGRPQPLAD 729 +QGYL+ RP P AD Sbjct: 1376 DAVQGYLLSRPVPEAD 1391 Score = 56.1 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 18/263 (6%), Positives = 42/263 (15%), Gaps = 26/263 (9%) Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLV 131 + M ++ + L + Sbjct: 551 ATLVVDAAGRLVAWNRAMEELTGIAAADMIGKGDYEYALPFYGERIPIL--CDLLRNPAI 608 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 P + L + F S T + R + Sbjct: 609 IPAARYSLLEQTEHRIVVELPLPFFRKGRGLFVW--TAASALTDEHGKVTAVIQVIRDVT 666 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGY---L 243 R ++ +R + + T I G Sbjct: 667 ER-------RIELEALAKSRERYQMAIEATNEGIWEWDVTTGELYHSPRCVEILGRGGAS 719 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWA----VSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 P + +T + + V+ + V Sbjct: 720 APDTLLRDLSLQVHPDDRLRMVTLTQSLMTEPVERFSLECRMRHPVQGWRWVLCHGVVQR 779 Query: 300 SFSVC---LLYMVRIYHRSEWLN 319 + S + + + Sbjct: 780 NGSGGPRRITGSIADITERKQSE 802 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 16/194 (8%), Positives = 44/194 (22%), Gaps = 15/194 (7%) Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 P K + + +I SL T + R + F + Sbjct: 345 LRHLLPPTKDGAWSQASFSIEAAHADGSLRTLDCLATTPDERGHRRV--LVFDTTRRNLE 402 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKL 258 R ++ A + + ++ E + G+ P + + Sbjct: 403 RQRVEAIHHRYMSILDNAPVGIFRIMPDGSMVGANREMARLWGFSSPEELLASEEARRLI 462 Query: 259 RY-----PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLL-YMVR 310 L+ ++ L+N ++ + + + Sbjct: 463 LCDDPKACPLSFARIAASGGLVNEEVLCRTRDGRSFTGLVSARAVPQDDDVQSYVDGFLL 522 Query: 311 IYHRSEWLNRRWHL 324 + + + Sbjct: 523 DISQLKEARDKLRQ 536 >UniRef50_A0YED8 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YED8_9GAMM Length = 642 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 107/588 (18%), Positives = 215/588 (36%), Gaps = 36/588 (6%) Query: 172 LFTAVLIYNMLFYYLTRMIV-SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS-----V 225 + L + + R+ + + + R F L L+ ++ Sbjct: 48 IAALSLEQSQELIHELRVHQIELEMQKEALLASREQAEISQSRYFNLYNLSPVAYSTLSD 107 Query: 226 LLLLLCTPYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVST-----LCLLNYN 278 L++ + + G + + + + + F A+ + Sbjct: 108 SGLIIQSNLTTSVLLGISTNALYQQPLAQYFIKEDQDKFYLFCKAIQRHKNDTISPCECE 167 Query: 279 QNFLQGVETEYSLAFIL--AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + T+ + L ++ + A DPLT LPN Sbjct: 168 LQIRRADGTQLWVNLTGIYTQSEDNKPELQIVLNNVTDTHNNIDEIRRLAFFDPLTGLPN 227 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 R L + L +DN + ++ G + ++ + L M+ Sbjct: 228 RRLLFDRLAHAVTTSARTNLYGAVMLLDLDNFKILNDSMGHGIGDLLLQKVSLRLKMCMR 287 Query: 389 ENEKLYQLPGSELLLVLSGPETEG-----RLQHMVNILNS---RQIHWNNTGLDMGYGAA 440 E++ L +L G E +++L ++ + + + + + + Sbjct: 288 EDDTLARLGGDEFVILLENLSSDEKKAAAQAEVVTQKILVSLVEDYNLQGFVHNSTASIG 347 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F G+ + LL Q+ A + ++ ++ L N +R L Sbjct: 348 IVMFKGDDLSFGDLLKNADVAMYQAKAASRN-TFRFFDPVMQAIAERRTQLENALRQGLV 406 Query: 501 QGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 Q + +L Q N + G + ++ + + ++ +F+ L + ++ VLE+ Sbjct: 407 QEEFVLNYQIQTNSNGKTTGVESLVRWINPEYATVSTGEFIALAEETDIIFLLGQWVLET 466 Query: 559 LLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 LA SVN+ L + + G + ++ +P +ILE+TE Sbjct: 467 ACAQLAAWSQHPTMSSWSMSVNVSALQFKKSSFVGNVETALEKSDANPNLLILELTESML 526 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + S++ ++++ G R ++DDFGTG+++ LKRL D +KID FV D++ + D Sbjct: 527 VDDVPSTIEKMKRIKSLGVRFSLDDFGTGFSSLAYLKRLPLDQLKIDQSFVHDLIVGSDD 586 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 A I +I L + + V+AE VET Q L ++G + QGY GRP Sbjct: 587 AAICETIITLGISLGICVIAEGVETADQYECLMEMGCKSFQGYYFGRP 634 >UniRef50_A6F7T4 PAS:GGDEF n=1 Tax=Moritella sp. PE36 RepID=A6F7T4_9GAMM Length = 1165 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 106/556 (19%), Positives = 203/556 (36%), Gaps = 23/556 (4%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFT 252 A + D L + T L V ++ GY Sbjct: 584 AIERYLSDEKLRLSSRVFSDTNEGLMITDVTGKIIDVNPAFTRATGYSRSEVLGQKPSIL 643 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMV 309 + F+ + ++ + + ++ ++ L ++ + + Sbjct: 644 ASDKQSPAFFIEMWQSLMEQGYWHGEVWNKKKNGELFAARLSISSLTNDDGENLHYVGLF 703 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 + + ++ + A D LT LPN L + + C L +DN + Sbjct: 704 SDITQIKQQQQKLEMMAHYDMLTKLPNRSLLADRFKSGIAHSQQTDTMLGVCFLDLDNFK 763 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ YG + + ++ + L +++ + + G E +L+L ++ + + Sbjct: 764 PVNDSYGHDVGDQLLIAVAQRLKSNIRDEDTASRQGGDEFVLLLGDIKSLAHCDETLQRI 823 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 ++ ++ + + L LL + Q+ Sbjct: 824 NYFLAQPYIIAGHTFNISVSIGVTLYPDDDADLDTLLRHADYSMYQAKLTGKNR-FHLFN 882 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 Q ++ L+ I+ AL + LY QP N + G + ++ + G++ P Sbjct: 883 PERDQQKIQKHQQLDEIKQALSNNEFALYYQPKINMKTGKVFGAEALIRWFHPEKGLIPP 942 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 FLP+I L + V+ LK + SVN+ LL + Sbjct: 943 LDFLPIIEGSELENQIGDWVINQALKQIVEWQKLGIFMEVSVNIASYHLLSAKFLTLLES 1002 Query: 596 LFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHK-FGFRIAIDDFGTGYANYERLK 653 + ++ Q + LEI E A + + + G IA+DDFGTGY++ LK Sbjct: 1003 ALASHPNLDAQYLQLEILESSALGDLNTIRNILNTCRDVLGVNIALDDFGTGYSSLTHLK 1062 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L A+ IKID FVK+++ + D I++ + LA + + V+AE VET + +L +G Sbjct: 1063 NLPANTIKIDQNFVKNMLDDPDDYAIIKGVLALADSFNREVIAEGVETTEHGLMLLSMGC 1122 Query: 714 QYLQGYLIGRPQPLAD 729 QGY I RP P +D Sbjct: 1123 YAAQGYGIARPMPASD 1138 Score = 44.2 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 25/300 (8%), Positives = 67/300 (22%), Gaps = 25/300 (8%) Query: 42 IFLAWMPLCVMLS---ILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVL 98 F AW + L+ L G+ V + + + F+ + V Sbjct: 132 AFAAWDSGKLTLAGPFHLVQGGYGAVGRLPIYLDRPSDEQSFWGFVTVLIRFPQVLDAV- 190 Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK-CSMYLVGSFFDFPLKISTFF 157 + G ++ + Q P+ + + + + + LK+S Sbjct: 191 --KLPALVEAGVAYQLSRINPDTGQIQVLSNSSAPLLVNPVANSIEIANVTWMLKMSPIN 248 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTL 217 G I + L T ++ + R+ + + + R Sbjct: 249 GWVHYISLLAMSLLSMTFTILTTFSAILIMRIKDNQKSLENIVATRTRELGDNLTRLNMA 308 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL------------ 265 + + L G + + + + Sbjct: 309 L--TSTGQVWFELNIQSGEVSFGGKNEQLTDVNPSDIQTIFEQWLEKIHPDDFESASNRY 366 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSL----AFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 ++ + + F + + + + + R Sbjct: 367 KKSLVSGMPFELEYRRKTKDGNWLWIHTACEFTAWDAHHKPIWCTGVHTDITQRKQIELR 426 >UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DIH6_THEEB Length = 1292 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 101/562 (17%), Positives = 181/562 (32%), Gaps = 30/562 (5%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFII 250 + E+R L+ + + LL L + + G+ Sbjct: 722 DITERKATELALRESEERYRLLAENTSDIICLLDCQGSCLYVSPSYETLLGWPTETLIGE 781 Query: 251 F---TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL- 306 + L + L ++ + Sbjct: 782 HFTQLCHPEERSRVKQELQQMIEQRQFWPITYQVCTARGDVLWLETLVKPRYDSQGHVQQ 841 Query: 307 --YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCL 355 R + + H A D LT LPN + + Sbjct: 842 LQTTSRDVTSRVQVQMQLHHDAYHDSLTGLPNRLYFMEQLAAAISQAQTNPQFHYAVLFF 901 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + + + L L+ + + G E +++L+ R Sbjct: 902 DLDRFKVINDSLGHGVGDQVLIAFATWLRRLVGNQYTVARFGGDEFVILLTHVPHPQRAI 961 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L + + + + ET +L + Sbjct: 962 ALCEELIHSLQQPLRVGERQIFLSTSIGVVFAQNEYETGMAVLRDADTAMYAAKRQS-GR 1020 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 + + Q +++ L + +R AL+QG L L QP+ + G + ++ + Sbjct: 1021 RYAVFDTQMYEQVLERLHLEHDLRQALNQGGLQLLYQPVVHLQSQRLVGMEALVRWQHPE 1080 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQ 586 G+++P F+P+ L D L L T SVN+ TL Sbjct: 1081 RGLVSPAHFIPIAEDTGLIVALDQWALAQACWQLWTWRQQYSTAANLVLSVNVSAKTLQD 1140 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + +RY + ++LE+TE + +E L I+IDDFGTGY Sbjct: 1141 PTFLQHLDTIRQRYPLPKGQLLLELTERIGIELGSEMLSLLESLRHRHVEISIDDFGTGY 1200 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 + L L +K+D FV + N + I+R I L+K V+AE +ET +Q Sbjct: 1201 SCLSYLHSLPIQHLKVDRSFVSQLEENERNLQIIRMILLLSKQLGYRVIAEGIETPKQLQ 1260 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 +L +LG QGYL RP P Sbjct: 1261 ILQELGCDEGQGYLFARPLPPE 1282 Score = 66.1 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 18/216 (8%), Positives = 45/216 (20%), Gaps = 20/216 (9%) Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 + P +V L + + + T +DL L + L Sbjct: 396 AIAPAFPGAWLLIPLIVADRVWGSLTLFNYPEPHEWSRTEIDLARAVATQLEVAIYQATL 455 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL---------LCTPYEND 237 + RR A E+ + ++ + + Sbjct: 456 YQ---QAQQELAERRRIEATLRQSEECFRLTATNVPGAIFRYIQYPDGRNRVFYLNPMCE 512 Query: 238 FIAGYLVPVF-----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV-ETEYSL 291 + G + + + ++ + TL + L Sbjct: 513 RLWGVPAEAAAEDGEHLWQLVHPEDREATWQSVLRSAETLTPWFAQWRIIHPTTGEIRWL 572 Query: 292 AFILAVLISFSVCLLY--MVRIYHRSEWLNRRWHLQ 325 +++ ++ R Q Sbjct: 573 EGAGQPTRDADGAVVWHTVILDVTDRHLAEARLKEQ 608 Score = 55.7 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 10/202 (4%), Positives = 35/202 (17%), Gaps = 20/202 (9%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 S+ ++ T ++++ + + H Sbjct: 540 ATWQSVLRSAETLTPWFAQWRIIHPTTGEIRWLEGAGQPTRDADGAVVWHTVILDVTDRH 599 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFI 249 A+ + A + ++ + L GY + Sbjct: 600 LAEARLKEQQAQLE-------LAARVSNIGFYFCDLHTGTFYVSPSYKAQLGYPATTQEV 652 Query: 250 IFTLGVGKLR-----YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 +L + + + T ++ Sbjct: 653 NLEDWEERLHPEDRDRALAAYRQFLRGEAHYSIDLRLRHCNGTYRWFHSEAVLIHDEQGQ 712 Query: 305 ---LLYMVRIYHRSEWLNRRWH 323 ++ + Sbjct: 713 PSKVVGTNVDITERKATELALR 734 Score = 43.4 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 28/324 (8%), Positives = 57/324 (17%), Gaps = 41/324 (12%) Query: 60 GWRGVVPVLCGMFCTNLWNFHLSFLQT---AVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 R + + + L + + VL L G Sbjct: 5 SPRSLAVDSWRLAVSTQGLLQLLQGRVGYDLEHYLAAVLSVLPVGVALYDVTGEIVYMNP 64 Query: 117 TSRYVWQ---------------RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDAD 161 R + R+F+ G P + + D Sbjct: 65 AGRALLGVEDPATTASQICADLRIFYCGSDRPYPKDELPGIQALQGLTVPPMELEVQYGD 124 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 TV S I + +++ + + R + + Sbjct: 125 RQLTVEVQASPILNPAGQVEFSISTFWEITARKRSELEQQILKNYWQAQANRYYEILQSQ 184 Query: 222 ALSVL-----LLLLCTPYENDFIAGYLVPVFFIIFTL---GVGKLRYPFLNLTWAVSTLC 273 + VL + V L + Sbjct: 185 SDLVLCSRADTTITFANDAFCQFFSRPASVVIGCPWSEFVLAEDLPPLLEKVAQLRPDAP 244 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTDP 330 ++ + L + R + + QAL Sbjct: 245 TFVNENRVYHPQYGLRWTQWMNTAIFDAEGNLREIQSVGRDITALK--EQLLREQAL--- 299 Query: 331 LTLLPNFRALEQAPEQEAGKSFCC 354 + QA + Sbjct: 300 -------NHVIQAIRNSLDLATIF 316 >UniRef50_B7K4E5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=8 Tax=Chroococcales RepID=B7K4E5_CYAP8 Length = 840 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 102/564 (18%), Positives = 204/564 (36%), Gaps = 25/564 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYL 243 I F ++ A + R A +LL ++ + GY Sbjct: 265 IRLYLFDITKYKTREAKLTTGKDRYRLFVEQATEGILLVNCETQYIIEANQAYCHLLGYT 324 Query: 244 VPVFFII--FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL-AVLIS 300 + L L+ S + S++ + Sbjct: 325 TAEIIGLSLHQLIAIDKAIIDQELSCVTSETPYFIKESIHRHKDGSLISVSGKINRTTYQ 384 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 ++R + + QAL DPLT LPN + Q + + Sbjct: 385 GQEIFCLVIRDIRDRKQAEEQLQYQALHDPLTNLPNRESFNQKLVLALDHAQRYQHLMAV 444 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 + ID+ ++ G + + S + L ++ + + + E +L+L + Sbjct: 445 MFVDIDSFTNINNTLGPSIGDRLLDSFGKRLSSCVRTGDTVARWGSDEFVLLLPQIKNTE 504 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + ++ L + + + E + LL ++ Sbjct: 505 DTVKLAQRIFDNLQVPFILDDHRLPVKCSIGIAVYPQDGEAGETLLKNAGTALGRTKEQG 564 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARL 526 +S + + L + + L++ L+ QP N + G + +L Sbjct: 565 RNH-YQFYNPNLSSEAALLLRLESLLHQGLEKKQFFLHYQPQINLKTKKVVGMEALLRWE 623 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL 585 GI+ P KF+PL + +L VL++ + + D VNL + Sbjct: 624 HPSLGIINPQKFIPLAEKTDLILHLGKWVLQTACEQNISWQKDGLPPISIGVNLSAREVQ 683 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q N+A + R+ + PQ + LE+TE + + ++ L G RIA+DDFGTG Sbjct: 684 QPNLAEVVARVLNDTGLDPQWLELELTEMSLRQHLTQARKSLRDLKNLGVRIALDDFGTG 743 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 +++ L++ +K+ F++D+ + + I+ + ++K ++ +VAE VET++Q Sbjct: 744 FSSLGYLQQFSFRTLKLHQAFIRDLRGTSEELGIISAALAISKGFNMRIVAEGVETEEQL 803 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 +L L + +QGY RP P+ + Sbjct: 804 KILSNLNCEEIQGYCFSRPLPVKE 827 >UniRef50_B1WWC9 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=B1WWC9_CYAA5 Length = 661 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 98/593 (16%), Positives = 207/593 (34%), Gaps = 37/593 (6%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 L L + L+ I R + ++R ++ V + Sbjct: 53 LQQLTIHLDQLTHTNLQLSEDIYHCQKLDEELRLNEQALQLNQERLHSILGSIDDVVWSI 112 Query: 229 ------LLCTPYENDFIAGYLVPVFF----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 +L + + + G + F + + + + + + Sbjct: 113 VPQTSQILYLNHATETVYGRPIADFLDNLNLWQEIIYADDQQRVEESQQLLYKTGIQDIE 172 Query: 279 QNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 L + + + ++ + + + + + AL D LT LP Sbjct: 173 YRILWPNDEIHWIRVRSRLIKDDQGNPIRIDGLTTEITEYKQIKDQLLHDALHDNLTGLP 232 Query: 336 NFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N L EQ + L +D + ++ G + + + Sbjct: 233 NRTLLMDRIEQGLKRCQRDKNRRFALLFLDLDGFKLINDSLGHLTGDQLLIILSHRFSRC 292 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGR 443 ++ + L +L G E +++L + + + I N + + Sbjct: 293 LRAEDTLSRLGGDEFVILLENLSNIDEAIAIADRIHNILKEPILLQNEEIFISVSIGIVL 352 Query: 444 FDGNQ-----ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + LL ++ A + + + K++ + N ++ A Sbjct: 353 GGEQSVYNNLDQVAELLRDADTAMYRAKAKGPGTS-KVFKPSMHTHVMKRLQVANELQRA 411 Query: 499 LDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ + ++Y QPI + +G++ ++ + G++ P F+P+ + + D V Sbjct: 412 IERQEFIVYYQPIISLDSDRIDGFEALVRWQHQEKGLIAPTDFIPIAEETEAILKIDQWV 471 Query: 556 LESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 L L SVNL L ++ + + + ++ +EIT Sbjct: 472 LRHACTQLGLWQQQFPNLGSLTMSVNLSSKHLAHPSLIEVLDEILAETGLGGSSLKVEIT 531 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E +++S+ +EQ+ + + +DDFGTGY++ L +I+KID F+K +V Sbjct: 532 ESFVMEQSKTSLDILEQIKQRKIELCLDDFGTGYSSLSYLDCFSFNILKIDRSFIKRLVA 591 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I+++I DLA ++ VVAE VET Q+ L L Y QGY P Sbjct: 592 EQDRCEIIKAIVDLAITLNMQVVAEGVETNVQRKRLKALNCGYGQGYGFFPPL 644 >UniRef50_Q3SK35 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=2 Tax=Betaproteobacteria RepID=Q3SK35_THIDA Length = 730 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 120/723 (16%), Positives = 228/723 (31%), Gaps = 36/723 (4%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 ++ +P A++ P ++ G T+ F LS + Sbjct: 2 IAYLCAPHALVLQKEASHRLRPKVSRPRTRYVIGRLHSQRAAAHPASTSPLMFRLSRYYS 61 Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRY-----GLTSRYVWQRLFWLGLVTPIGIKCSMY 141 L + VV+ R + + W + S Sbjct: 62 IASLVGISIVVVVLSWFYRQLAIETLLAHQTRSNVDLTRSYANAIWHRFDAFVSA--SGE 119 Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 ++++ A ++++ + L ++ I + Sbjct: 120 WSAEDLRRRPEVASLHAATLAQMHGMNVVKVKVYNLSGTTVYSSEAGQIGEDKHDNPGFL 179 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 A E N + V ++ Sbjct: 180 SARAGKPASEIVFRDQF-------YAFEEVIADRNLIATYLPIHEHGNGPVKAVFEVYTD 232 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 L + L L I+ + + + +R Sbjct: 233 VTPLVAKMEATQTKIITGVVLALALLYLFLFLIVRRADQ-----IITRQD-RERQDNEQR 286 Query: 322 WHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 QA D LT LPN + + + L +D + ++ G Sbjct: 287 IRHQAFHDSLTGLPNRNSFLEHISEAIDRSKRSGNPGALLFLDLDRFKLVNDSLGHDAGD 346 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNN 430 +R + ++E + +++ G E +++L + + + + Sbjct: 347 QLLRITASRIQKCLRETDMAFRMSGDEFVVILESVDKGEHAALAAQRVMQEMAVPMSLSG 406 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + + F G+ +Q LL + ++ + ++ +++ Sbjct: 407 CEVIVNVSIGITTFAGDSADVQALLKEADSAMYRAKQVGQNH-YEFHTPDMNSAAHERLS 465 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + ++ AL + +L+ QP + K + +L G++ P+ F+PL+ L Sbjct: 466 METDLQRALQNQEFVLHYQPKIDTATKAIVSVEALLRWNHPTRGLVLPNTFIPLLEDTGL 525 Query: 548 SARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VL R SVN+ + + R + + Sbjct: 526 INPVGEWVLLQAACQAQAWIDAGLEPIRMSVNISAKQFRSHILVETVRRTLGASQLESRY 585 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LE+TE NAE S+ +++L G ++IDDFG+GY++ LK+ D +KID F Sbjct: 586 LELELTESMFIENAERSIQIMQELKCLGVSLSIDDFGSGYSSLAYLKQFPVDYLKIDRSF 645 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V D+V+N DA I +I LA + L +VAE VE Q Q L K G LQGYL GRP Sbjct: 646 VTDLVSNKKDAAIAVAIAALAHSLDLKLVAEGVEDQAQVEFLEKQGCHELQGYLFGRPVS 705 Query: 727 LAD 729 + Sbjct: 706 AEE 708 >UniRef50_C6QG37 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QG37_9RHIZ Length = 625 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 100/511 (19%), Positives = 191/511 (37%), Gaps = 27/511 (5%) Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + + ++ + K R A++ + Q+ + Sbjct: 106 AELVRNHVKRETGLDNPQERKKQRAWIERHVAALARGETFTHTQHL--KSGRI--VLVTN 161 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------ 349 L + + ++ H A DPLT + N +A ++ Sbjct: 162 KPLEG--GGWVDIQEDITERRQAEQKIHWLARHDPLTEIANRLQFHEALDEALRNLAPSQ 219 Query: 350 -KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS-- 406 + + +D + ++ G + ++S+ ++L +++N+ + +L G E ++ S Sbjct: 220 TLALHWIDLDGFKTVNDTLGHPVGDALLKSVAKSLKRAVRKNDIVARLGGDEFAVLQSAS 279 Query: 407 GPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + M L + + +T + LL Sbjct: 280 RVVRKADAERMAQRLLKEICKPHDLGGQQVSCSASIGIAFAPLHGQTAEQLLKAADLALY 339 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYD 520 ++ A +A + ++ + L + +R ALDQ L LY QP+ + E ++ Sbjct: 340 KAKAGGKGIAF-FYDPDIADDANSRYELQSDLRGALDQNQLELYYQPLVDTENRDVIAFE 398 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 +L G++ P F+P+ + L L + P R SVNL Sbjct: 399 ALLRWHHPLRGMIAPADFIPIAEETGLIVEIGEWALIRACQEAVKWPDT---IRVSVNLS 455 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P+ + N+ ++ + ++P + LEITE + ++ + L G RIA+D Sbjct: 456 PIQFERGNLYQAVVNALRISGLAPHRLELEITEGVLLRDEINTRAILHNLRTLGARIALD 515 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDI--VTNTLDAMIVRSITDLAKAKSLSVVAEF 698 DFGT YA+ L+ D IKID FV+D+ I++++ L K +S VAE Sbjct: 516 DFGTAYASLSYLRSFPFDKIKIDRSFVRDLDVGKRKDCEAIIQAVAGLGKQMQISTVAEG 575 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +ET Q + G LQG+ P P +D Sbjct: 576 IETLDQAQTVTAAGCNELQGFYFSHPVPGSD 606 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 105/570 (18%), Positives = 195/570 (34%), Gaps = 35/570 (6%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL------CTPYENDFIAGYLVPV 246 ++ + + + VL++ G + Sbjct: 375 IVHDITAQQKARQQLRKEYEFFQMVIDNMVDPVLVMDTSRHIKKANRAAMFLADGKIDET 434 Query: 247 FFIIFTLGVGKLRYPFLNLTWA---VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + P + + + L E + A Sbjct: 435 AEVCCYEAFHRGSLPCDYQSQSCPMHTVLKTGKPASVIKHLDEKNKTYEIQAAPYFDDMG 494 Query: 304 CLLYM---VRIYHRS-------EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFC 353 +L + R + R+ + D T LPN L Q ++ Sbjct: 495 NILGVIESFRDITKRLEVENSLVEHERKIYDLTHYDSATGLPNRSVLIDRLNQAIYRALF 554 Query: 354 --------CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 L +D + ++ G + ++ I + L L ++ L + GS+ L++ Sbjct: 555 NNSSLALLSLTLDRFKKINETMGHHVGDCLLQEIAQRLKKLTCDHSSLAKDSGSQFFLLI 614 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G + + + + + + N L + + E LL + Sbjct: 615 EG-DPKEVVFDFADEVLTEVKQSFFANGQELIPSGSIGIAFYPDHAENATELLARADVAM 673 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGY 519 S A+ + + + + ++ AL+ L L+ QP + + G Sbjct: 674 RLSKDDMGGGAVMVYDPKYGEVAPQSLRMEADLKHALENNQLHLHYQPQFDLKNAGLVGV 733 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + ++ G ++P +F+PL + L VL + + +VN Sbjct: 734 EALIRWNHPTEGPVSPGEFIPLAEETGLIHPLGRWVLREACRQAKFWQNNFARIVPVAVN 793 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L L + N + + I PQ + LEITE E SM + + GF +A Sbjct: 794 VSSLQLKKNNFVHVLEECLNEFQIDPQLIELEITESAVMDRLEKSMELLNAIKGLGFNLA 853 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LK+ +KID FV D+ T+ DA I+ +I +A + L +AE Sbjct: 854 IDDFGTGYSSLSYLKKFPFSKLKIDRSFVMDLETDENDAAIITAIISMATSLGLKTIAEG 913 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET +Q+ L G +QG+L+ RP Sbjct: 914 VETVEQKHFLTDHGCDEVQGFLLSRPLSAD 943 >UniRef50_C6WT76 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT76_METML Length = 865 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 122/663 (18%), Positives = 234/663 (35%), Gaps = 37/663 (5%) Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFG 158 I+ + Q + + ++ P+ I SM F + I + Sbjct: 192 LLAWIILFVCVELIIVSAVPDLNKQFILSMFVILPMLIWASMSFGLVGGSFFVIILSSIA 251 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP--HFAQILWRRDIAPSLGKEKRAFT 216 + S + ++++ + + ++ Q +K+ + Sbjct: 252 VWVTSQGSGNFYSHDLSEGVFSLWTFMVALVVTMLLISALQSERNLAHMTIQKNDKKLRS 311 Query: 217 LSWLAALSVLLLLLCT-----PYENDFIAGY--------LVPVFFIIFTLGVGKLRYPFL 263 + A +++ + + I GY +P I Sbjct: 312 VIDGAFDAIVTIDSAGLLVEFNPAAERIFGYKKEDVLGKSMPDLIIPARYRNAHHAGHQQ 371 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRW 322 V+ + ++ +E+ + L L ++ L+ VR + + Sbjct: 372 YKMTGVTHIFNQRIELVGMRADGSEFPIELTLTALKDNNLSLVTGFVRDISEQKRARQEI 431 Query: 323 HLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT LPN R L + + + +D + ++ G + Sbjct: 432 ENFAYYDALTSLPNRRLLADRYQHAMSIAQRAKTYCALLFIDLDKFKVLNDTKGHDVGDQ 491 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GRLQHMVNILNSR---QI 426 + + + ++ + + +L G E +++L + ++ + L + Sbjct: 492 LLIEVAHRIQHTVRAGDTVARLSGDEFVVILESLDQNASIAYQQVSEIAQKLLAELNRNY 551 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + F+ N T + L S +++ Sbjct: 552 YLSLFEFATSASIGVTLFNDNALTFEDHLRHADTAMYLSKDSGGN-TYRFYDQLTQESIE 610 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 K L + AL +L L QPI N K+ + +L G ++P +F+P+ + Sbjct: 611 KNFALEAALGLALANQELYLNYQPIVNVAKQVVAAEVLLRWSHPTLGNVSPVEFIPIAEK 670 Query: 545 FNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 NL + VLE + L T + SVN+ L N + + R I Sbjct: 671 SNLIIKIGHWVLEQACEQLKTWEASPVLGQIKLSVNISAKQFLYINFVQELREILARTGI 730 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 +P + LE+TE N + ++ I L + G RIA+DDFG G+++ LK+L IKI Sbjct: 731 NPSLLKLELTETAVIDNMDDVIHKIGILRQMGVRIALDDFGIGHSSLVYLKKLPVTQIKI 790 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV D++T++ DA I++ + + K +VAE VE +Q LL + G Y QGY Sbjct: 791 DQSFVHDVLTDSNDAAIIQMVLAVGKTIHCDIVAEGVEQVEQFELLREFGCDYFQGYYFS 850 Query: 723 RPQ 725 RP Sbjct: 851 RPV 853 >UniRef50_C6WUZ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUZ4_METML Length = 834 Score = 611 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 88/579 (15%), Positives = 195/579 (33%), Gaps = 22/579 (3%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 V L + + ++ + ++ + R ++ Sbjct: 248 VQLDGQVIGTVGFARDISEKQHLVSEVTKQRNAYQSLVQNLPTTIIRYDLDGKRIFVNSR 307 Query: 227 LLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + + + G L + + + + Sbjct: 308 CFETYNIEVPYELNKTPLEWWSPYIVNVTG--AEFMTQLMEVMQFNVQKTLEIHSMHEDK 365 Query: 287 TEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + + + R+ A D LT LPN Q Sbjct: 366 VAVH-QLRIVPEFDEVHQVCGALTIATDITEVAEYRRKIESMAFHDQLTGLPNRTLFSQQ 424 Query: 344 PE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + L +D + ++ G + + + R + + ++ + Sbjct: 425 LSVAIDQAKTNNSQFALIILDLDQFKSINDTMGHAIGDKLLIEVARRITNSLDQHCTCAR 484 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E ++++ + ++++ N+L ++ + + + F + E + Sbjct: 485 LGGDEFIILVESVPSREHVEYVSNVLLNQIMQVYVIDGSEYFISASIGIAYFPDDSEDMD 544 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL + + ++ ++ + +R A++ ++ L QPI Sbjct: 545 DLLKYADSAMYHAKKGGRNR-YHTYSPAITESIQHRLNVETELRRAIENDEIYLEYQPIV 603 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + + +G + + GI++P F+ + + + ++ K Sbjct: 604 DMTSNQVKGLESLCRWHSRKLGIVSPMVFIQIAEETGMIVELGQWIMREAFKAARLLNAQ 663 Query: 570 K-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 SVNL + ++ ++ L K +P + EITE + +S + + Sbjct: 664 LKHPVSVSVNLSARQFFEVDLIHQVRHLLKEQQCNPAWIKFEITESLLLESNQSVLNALN 723 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 + G ++++DDFGTG + L + +KID FVK+I +N DA++V++I L Sbjct: 724 AFNDLGIKVSLDDFGTGQSALAYLSKFPIHQVKIDYSFVKEITSNPNDALLVKAIIALTA 783 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + ++AE VET Q LL G +Y QGYL +P L Sbjct: 784 TLNKELIAEGVETSAQATLLQSYGCRYAQGYLYSKPISL 822 >UniRef50_A1WC44 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A1WC44_ACISJ Length = 737 Score = 611 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 107/551 (19%), Positives = 198/551 (35%), Gaps = 28/551 (5%) Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 E+R + + +L + GY + Sbjct: 178 EAERAVRQSEERMRKFAIATEEGLAFHRDGRILDANEALQRMVGYSLAELVGQSIFDFA- 236 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL-LYMVRIYHRSE 316 L Y + + + + +VR + Sbjct: 237 LPEYRALAVEYTRRGSEKPYELAMRHKDGRVIPIEVVGKTMPQQEGDYRVVVVRDITARK 296 Query: 317 WLNRRW----HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 + L D LT LPN R L E++ + + +D+ + ++ Sbjct: 297 QAQEQAQVQARFLVLHDTLTQLPNRRHLMMQLARMASAAQERQTRAAVLFIDLDHFKTVN 356 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN----I 420 G + + R L ++ + + ++ G + +++L + + Sbjct: 357 ELLGNQAGDQLLIEMARRLQDGVKATDFVARVGGDQFIVLLPDLANRAAAAEVADALLAR 416 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + T L + F + + LL + + + E Sbjct: 417 VRAE-FAIGGTPLSLSPSIGISVFPDDGYSPDELLRRADAAMHHTKESGRGTRM-FYEPG 474 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + GQ T+ + + +R A+ QG L+ QP + G++ ++ G++ PD+ Sbjct: 475 MEGQPTELLQQEHLLREAVFQGAFALHYQPQVRVADGRLVGFEALVRWRHPVRGLVGPDE 534 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL L VL + L + +VNL + Q+++ G I ++ Sbjct: 535 FIPLAESRGLITPIGRWVLREACRQLKAWHDEGLPRVPVAVNLSAIEFRQRDVVGEIAQV 594 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + ++PQ + +EITE A+ + ++ L G + +DDFGTGY++ LKR Sbjct: 595 LQSAGLAPQYLEVEITESALMQQADHTRTTLQALQALGVAVTVDDFGTGYSSLAYLKRYP 654 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D IK+D FV D ++ D IV +I LA + L VAE VET +Q ALL +LG + Sbjct: 655 LDKIKVDRSFVTDTPADSEDVAIVTAIIQLAHSLQLQPVAEGVETAEQLALLQRLGCELA 714 Query: 717 QGYLIGRPQPL 727 QG+ I P Sbjct: 715 QGFGIAPPMDA 725 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 90/516 (17%), Positives = 188/516 (36%), Gaps = 22/516 (4%) Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 ++ + GY + L + + + N + + Sbjct: 9 IIRVNPAFTTLTGYSAERITGSLASELYLLPEGMER--EVLKKEAVWSGNVSIKKENGEI 66 Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA 348 L + I ++ + D T LP+ + QE Sbjct: 67 LQGLQTTVSTTVEDGGLARYIHIIKPADAATQE----GSYDQNTNLPDRNMFQHILAQEQ 122 Query: 349 --------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + ID+ + ++ +G + + + L++ N+ + L G+ Sbjct: 123 ENAKRKHFQLGVLYIDIDHFKVINDSFGYLKGNLLLGQVAERFKALLRGNDLIASLGGNR 182 Query: 401 LLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +++L+G + L +N + M F G+ + + LL Sbjct: 183 FVVLLTGLAHPEDATIVTLKLMQALESGFCIDNHEVVMTISTGIAIFPGDGDDSEALLQS 242 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 A + ++ + + +R A+++G+ +L+ QP N Sbjct: 243 AEQSMYSVKADGGN-NYQFFKASTQSSAINRLNMESEMRKAIERGEFVLHYQPQINATSG 301 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GP 573 G + ++ + G++ P F+ + + + V+ + Sbjct: 302 HVVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIGEWVMYEACRQNKAWHDAGLAEL 361 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 + +VNL + + ++ K+ ++P + LEITE + E+++ +E++ Sbjct: 362 KVAVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEITESVIMKDIEATIALLEEIASM 421 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +AIDDFGTGY++ LKR D +KID F+ D++++ D IV +I L+ L+ Sbjct: 422 GLSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVISSEDDGKIVEAIIGLSHNLKLN 481 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+ E VE +Q A L + +QGY +P P + Sbjct: 482 VICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADE 517 >UniRef50_C8X1L9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1L9_DESRD Length = 936 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 103/565 (18%), Positives = 199/565 (35%), Gaps = 31/565 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF 248 E R L A + L+ ++C + GY P F Sbjct: 329 VEDITSEMETAKNLEKSEARYRNLFANALEGMYLIGTDDSVICVNQAFADLLGYASPKDF 388 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLL------NYNQNFLQGVETEYSLAFILAVLISFS 302 G R L + + ++ ++ Sbjct: 389 ETSNRGKKFSRIYETPTVNKNKFNALWTKGKIMHLETQVRRKNGELIWISENTKIVKDDH 448 Query: 303 VCLL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------K 350 +L + + R QAL D T LPN + E+ Sbjct: 449 KNILYLQGTIIDITERKKSEERLLHQALYDHRTNLPNRSYFVEKIEKGLKRVGQEPGFSF 508 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 +D ++ +G + + + + + E + L + E ++ T Sbjct: 509 GLLYFDLDGFGTINDSFGYFVGDRLLLEVSHRIRTAIDETDTLARFSSDEFCVMSEN-RT 567 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++Q + + + + + + ++ + +L + Q+ Sbjct: 568 SAQIQDLAENIRQKLEQVFFLDGQEITLTTSIGILEYNVTYTRAEDMLRDIELAMLQAKK 627 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + + +++ L+ +R ALD+ +L+L QPI + E + ++ Sbjct: 628 RGKNR-WVIFSSDMYQRKSERTLMEKDLRRALDREELVLNYQPIIKLDSGELNSLEALIR 686 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + G ++P KF+PL Q L VL+ + + K +VNL L Sbjct: 687 WKHPEHGFISPGKFIPLAEQTGLIEPIGKWVLKEACRQVKIWRESNKSLIMNVNLSSKQL 746 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + I ++ + ++ P + LE+TE A S ES++ +++L G R++IDDFGT Sbjct: 747 EKAGLERNIYQILQDINLDPACLNLEVTESAAMSKLESNVRTLKRLKFMGIRLSIDDFGT 806 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ L+R D +KID F+ + IV +I +LA L +VAE +ET Q Sbjct: 807 GYSSLAHLQRFPLDELKIDRSFIISLKAGKACHRIVHAIVELALGLKLKMVAEGIETNSQ 866 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 ++ Y QG+L + + Sbjct: 867 LNMVKTFNCHYGQGFLFSKAMAANE 891 >UniRef50_B8DMV5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Desulfovibrio vulgaris RepID=B8DMV5_DESVM Length = 663 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 101/560 (18%), Positives = 187/560 (33%), Gaps = 49/560 (8%) Query: 209 GKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 + L+ A I GY + F G + L Sbjct: 103 DTAQSFRVLADHLADWESWEDADGKVVFVTPACQRITGYSLESFRANARFIEGIMHPEDL 162 Query: 264 NLTWAVSTL-----CLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRS 315 L + ++ E LA L + + R Sbjct: 163 PLWRKHREMVASGAEMVEVEVRVRTQDGRERWLACTSRRLHDAEGTSQGVRFSGRDVTDR 222 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRH 366 + + + QA DPLT LPN ++ + L +D + ++ Sbjct: 223 KIMLTQMKHQAWHDPLTGLPNRALCLDRIDRSLHRARRGVDNVCAVAFLDLDRFKVVNDS 282 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NS 423 G +R + R L + + + +L E +L+L +E V + Sbjct: 283 MGNSAGDQVLREVARRLAENTRTIDTVSRLGSDEFILLLDEVRSEEEALITVQRICTSLE 342 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + + + +L + H + + + Sbjct: 343 PPLEVAGRQIRISASVGVVM-NRGGGNADEMLRNANIAMHHVKEHGGD-GMAVFQPSMLE 400 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 Q + L + ALD + L QPI ++ G++ ++ D GI+ P +F+P Sbjct: 401 QAMNLMQLEIDLHRALDNNEFFLVYQPIMSLHDRRLTGFEALVRWNHPDRGIVGPSEFIP 460 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR---FSVNLMPLTLLQKNIAGRIIRLF 597 + + VL + LA + R VNL L Q + ++ + Sbjct: 461 VSESTGQIHQVGHWVLAEACRALAAWREQQPSMRSVIMHVNLSARQLSQPGLVEQVAAVL 520 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + + + + LE+TE N + + + +L + G R+ IDDFGTGY++ L++ Sbjct: 521 RETGLPARCLKLEVTETMLMENPDYANLVLRRLKEIGVRLCIDDFGTGYSSLSYLQQFPI 580 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS--------VVAEFVETQQQQALLH 709 D +K+D FV + IV+++ LA + L ++Q+ +L Sbjct: 581 DTLKVDQSFVARMCREPGHFKIVQAVVALAHSLGLDVVAEGVEE--------EEQRIMLS 632 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 +L + QGYL RP P D Sbjct: 633 ELSCEGGQGYLFSRPVPGED 652 >UniRef50_A4A7P9 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7P9_9GAMM Length = 834 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 104/589 (17%), Positives = 209/589 (35%), Gaps = 28/589 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++FT + SL F + R I + + Sbjct: 230 SLFTGETIRSLVRDPDGNVTGFVTVIRDISQRKLNERRLTMAAQVFTHAREGILITDD-- 287 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 ++ + I G+ F + + + + Sbjct: 288 ----AGKIIEVNEAFEDITGFSRDEAMGKNPSFLSSGQHSAEFYAAMWDELKKNDYWSGE 343 Query: 279 QNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + + ++ + + + R + ++ A D LT LP Sbjct: 344 FFNRRKDGSLFVELITISAIRDANEAVQQYVGLFTDITRMKEHQKQLEHAAKFDSLTDLP 403 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L + + + + +D + ++ G + + R + + Sbjct: 404 NRILLGDRLSMALSQSQRRGSKVAIAYIDLDKFKAINDRLGHAAGDLFLVQLSRQMKTAL 463 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF 444 +E + L ++ G E + ++ + ++ L + N L + + Sbjct: 464 RETDTLARIGGDEFVALIGDVADKTECAVLLRRLSEAIKTPVTINGEALSVSASIGVTLY 523 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + LL + + L+ + + LL+ +R AL + + Sbjct: 524 PEDSCDADQLLRHADQAMYAAKQNS-SHDLEFFDVSEGYNLDLRRALLSEVRQALLRQEF 582 Query: 505 LLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L+ QP + E G + ++ + G++ P +FLP + LS V+ L Sbjct: 583 RLFYQPKVHLPSGELLGAEALIRWEHPERGLLKPAEFLPDVETSPLSVEIGDWVIAEALS 642 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNA 620 + SVN+ + L + ++ R+ + P + LEI E +A ++ Sbjct: 643 QMNEWLETGLRVPVSVNVGAMQLQAPDFTEKLTLALARHEALDPSCLELEILETRALADL 702 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E++ ++ + G R+A+DDFGTGY++ LK L A+++KID FVK ++++ D IV Sbjct: 703 EATSRIMKACRRLGVRMALDDFGTGYSSLRYLKFLPAEVLKIDQSFVKGMLSDRDDKTIV 762 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I L + V+AE VET + L +LG QGY I P P +D Sbjct: 763 MAIIGLGETFDREVIAEGVETAEHARELLRLGCGRAQGYAIAHPIPASD 811 >UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n=2 Tax=Clostridium RepID=A0PXI0_CLONN Length = 591 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 99/539 (18%), Positives = 196/539 (36%), Gaps = 27/539 (5%) Query: 214 AFTLSWLAALSVLLLL-----LCTPYENDFIAGYLVPVFFIIFTLGVGKLR-YPFLNLTW 267 + + +++L L Y I V + K++ + N+ Sbjct: 39 FSEIIDSSKEGIMILDESLTVLYANYTLLKICERNVEEVINERIYNINKIKVEFYKNIVM 98 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 + + + YSL+ + + + + + R + Sbjct: 99 NIKQNKIWTGELEYRSKSGRMYSLSILGKSIISQRDLQTYYIVIFEDVTKLKESERDINY 158 Query: 325 QALTDPLTLLPNFRALEQ-------APE-QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 D LT LP + E L +D+ +F++ G + + Sbjct: 159 LKKYDILTQLPQKELFVKNLKDEIIRLEGTGKLVGVVTLGLDDFKFINEAMGHLSGDRLL 218 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGL 433 R + R L + + L ++ G E ++L+ E +++ +N + + N+ + Sbjct: 219 RDVTRRLK-TLDKKCFLARITGDEFGIILTECEDIKDIENRINHIQQLFCKAFVINDQEV 277 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + + L+ + + + +S K++ ++ Sbjct: 278 FVTASIGISIYPLDALNANELIMNATSAQNFVKKNGKND-YKIYSKDISKNAYKRIEMIA 336 Query: 494 TIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 ++ A++ +L+ QP + E G + ++ G++ PDKF+PL + L Sbjct: 337 LLKHAVENNQFVLHYQPQVSLESGSVMGVEALIRWNHPKLGLVYPDKFIPLAEKTGLIIP 396 Query: 551 FDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 V+ + SVNL L ++++ I+ K + P+ + + Sbjct: 397 MGEWVIREACRQNKIWHDSGFEELVVSVNLSALQFEKEDLVDVIVDALKTSGLDPKFLEV 456 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE N + ++ + L + G +IAIDDFGTGY++ LK D +KID F+ Sbjct: 457 EITEGILMVNTDKAIQTLNDLKEIGVKIAIDDFGTGYSSLSYLKEFPIDRLKIDRSFIMG 516 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I + I I +LAK+ L+VVAE ET L +QGY +P Sbjct: 517 IPK-EDNGAIANIIIELAKSLHLNVVAEGTETLDHIKFLKVRKCDTIQGYYFSKPVSGE 574 >UniRef50_A1VEL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VEL8_DESVV Length = 926 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 106/573 (18%), Positives = 193/573 (33%), Gaps = 30/573 (5%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDF 238 L ++ I+ RR E R + +A + L+ L+ + Sbjct: 339 RLLLELVSGHVAGAIIERRKAFALQESEARFRAIFEHSAAGICLVGRDGLLMDANPAFEE 398 Query: 239 IAGYLVPVFF--IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF--LQGVETEYSLAFI 294 + G K + + + L+ + I Sbjct: 399 LLGLTRAEVVGCRFDAFLPVKAASELDSTCRSSFAEGRDTVSLRLPFLRVDGEQRWGRQI 458 Query: 295 LAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQE 347 + + +L V + R A D LT LPN + Sbjct: 459 VTAVRDVAGDVAFVLAQVEDITEQQQTEARLTRMAFHDALTGLPNRVLFLDRVETALRRA 518 Query: 348 AG-----KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + L +D + ++ G +R R L P ++E + + + G E Sbjct: 519 RRHETYHFAVLFLDLDRFKVVNDSLGHKAGDELLRQFARRLEPCLREVDTMARFGGDEFA 578 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L +++ L + + G + + +L Sbjct: 579 ILLDDMSDVDESVNIIERLQAALRQPFLVQGMEVYTGASIGAVLRARDYTQAEDILRDAD 638 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 ++ E + + N +R ALD ++ LY QPI Sbjct: 639 IAMYRAKDSGKGR-FVVFESSAAPGAQDILRRENELRRALDGDEIELYFQPIVALRTGRI 697 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRF 575 G + ++ + G++ P F+PL + NL D+ V + + Sbjct: 698 TGLEALVRWQHPEQGLLAPGTFIPLAEESNLICDLDMHVFRKGCLAVVALQEAFEGPLAV 757 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 ++N+ + + + I + + PQ V LEITE + E + +L G Sbjct: 758 NINISARSFRRLRMVQDITDILRETGCPPQMVKLEITENLLLTGLE-VTDKLWRLKDLGL 816 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 + +DDFGTGY++ L++ DI+KID F+ + IV SI +L + L VV Sbjct: 817 SLVLDDFGTGYSSLNYLRQFPMDILKIDRSFISRVHEERAARGIVESIANLGRTLGLGVV 876 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE +E +Q +L ++G + QGY RPQP Sbjct: 877 AEGIEVSEQAEILLEVGCPHGQGYFYSRPQPFD 909 >UniRef50_A2SJS2 Sensory box/response regulator n=3 Tax=Bacteria RepID=A2SJS2_METPP Length = 754 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 98/619 (15%), Positives = 211/619 (34%), Gaps = 39/619 (6%) Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 L + + + + S ++ + Sbjct: 92 VLMLTGLDDDASITRAYEAGATDFFVKSTQWSLLAGRLRYLLRSSRTRLELERSKSKLAR 151 Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 R + W S LL + G + + +I + + L Sbjct: 152 AQDLARMGSFDWRRDRSGLLFSVEGLRVFGLGPGDHLGMRSLIRMVPAEHRQGCLSLLRD 211 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHL 324 ++ +L + + + + +V+ + Sbjct: 212 TLARSTVLATDFPVQLIDGRQRVVHVEAEPEFNEHGNLTGYTGIVQDVTDRRVAEDKIRH 271 Query: 325 QALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT LPN R L EQA + +D + ++ G + Sbjct: 272 LANFDALTGLPNRRQLIWRAERAMEQAKRLNHQVGLLLIDLDRFKVINDTLGHGAGDELL 331 Query: 377 RSICRTLLPLMQENEKL-------------------YQLPGSELLLVLSGPETEGRLQHM 417 + R L ++ ++++ +L G E + +L + + + + Sbjct: 332 MEVSRRLRSCVRHSDQVVETGIDSVGLRAHRSLEAVGRLGGDEFVALLPEVDADQDAERV 391 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + I + F + ++ +L + A A Sbjct: 392 ALRILEVMREPIFVGGQECFVTASVGIALFPRDGASVADVLRNADVAMYSAKAAGRNAA- 450 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 ++G+ +++ L + + A+++ +L+L+ QP + G + ++ + +G Sbjct: 451 SLYRPHLAGKGREKLELESALHKAIEREELVLHYQPKIDVRTARMVGAEALMRWKR-NGV 509 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIA 590 ++ P F+PL + L + + +VNL + ++ Sbjct: 510 LVPPGDFIPLAEETGLIVPMSEWAIREATRQARLWQQHHGIDTSIAVNLPSRLFERTDLV 569 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + + ++ + LEITE + ++ + + +L++ G I+IDDFGTGY++ Sbjct: 570 THIQQAAAAHGVTHSCIELEITETGLMKDLQNVIPALHRLNEIGVEISIDDFGTGYSSLA 629 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L L +KID FV+D+ + +V +I LA++ + V+AE VE +Q +LH+ Sbjct: 630 YLTTLPISELKIDRSFVRDLGVTLQSSAVVTAIIALARSLGIRVIAEGVENLRQMEVLHR 689 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG +QG+L + P D Sbjct: 690 LGCSTMQGFLFSKALPPED 708 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 102/444 (22%), Positives = 181/444 (40%), Gaps = 30/444 (6%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + Q D LT LPN EQ +A + L +DN + + Sbjct: 199 ITERQSKE--LVHQYSHDLLTNLPNRILFVDRLEQSIGRRASRDAHLAVILLDLDNFKRV 256 Query: 364 SRHYGLMMRVHCIRSICRTLLPLM------------QENEKLYQLPGSELLLVLSGPETE 411 + G I+ + L + + L +L G E ++L ++ Sbjct: 257 NDSLGHKSGDLLIKQLGEDLRKVFLGNELARRYGIEASSITLSRLGGDEFGIILDEVDSL 316 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + +V L SR+ + + F + + L+ + Sbjct: 317 DLVVRIVQHLIEVISREHDIEGHQVFLTCSVGISVFPYDGDDADTLIKNADAAMYDAKQR 376 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + + ++ QT +Q++L N + AL + + ++ QP + + G + ++ Sbjct: 377 GRN-SFQFYTKDINSQTYRQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRW 435 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 + G+ P F+ + + + VL+ + + + D R S+NL Sbjct: 436 RHPEKGLQPPANFIAIAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQF 495 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q ++ + + I+P + LE+TE + + ++ + QL+ G R+AIDDFGT Sbjct: 496 RQSDLVEQCRNTIRSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGT 555 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK D +KID FV+DI + D IV +I LAK+ L VVAE VET++Q Sbjct: 556 GYSSLNNLKHFPIDTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQ 615 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L +LG + +QGY RP P Sbjct: 616 LGFLKRLGCEIVQGYFFSRPLPFE 639 >UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Arthrospira RepID=B5VW83_SPIMA Length = 655 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 87/420 (20%), Positives = 161/420 (38%), Gaps = 19/420 (4%) Query: 324 LQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 ++ D LT L N + ++ E L +D + ++ G + Sbjct: 183 YKSTHDGLTDLYNRSYFMRELDEVVERAKEDPEYQFVVLLLDVDRFKIINDSLGHQVGDR 242 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNT 431 + + L + + +L G E ++ ++ + + I Sbjct: 243 LLEGVGERLRECIPPWHTVARLGGDEFAILFDDLNNLTQISQTAQNIQYHLQQPIILGEQ 302 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + + + + +L Q+ + + + ++ L Sbjct: 303 EVFSTVSIGIAISNVSYSNGKEILRDADTALSQAKSKGKA-CHVIFNPTMHREAWDRMQL 361 Query: 492 LNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 N +R A+++ +L L+ QPI + E G + ++ G ++P +F+P+ + L Sbjct: 362 ENDLRHAIERQELQLHYQPIISLETLEIIGCEALIRWEHPKRGWVSPSQFIPIAEETGLI 421 Query: 549 ARFDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 VL S + L K P SVNL L + ++ + + P Sbjct: 422 QPIGEWVLRSACETLHRWQLMFPQGKQPFMSVNLSTYQLTNPQLVNKVQTILEETGCDPC 481 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE AE + + +L + G ++ IDDFGTGY++ RL +KID Sbjct: 482 RLKLELTESTIAEYAEVVVPQMRELSELGIKLCIDDFGTGYSSLSRLYHFPIHTLKIDRS 541 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F++ I + I +I +LA L V+AE VET +Q A+L G Q QGYL + Sbjct: 542 FIEGIDESQDQLKIAYAIVNLAHTLGLEVIAEGVETPEQMAVLQAWGCQLCQGYLFSKAV 601 >UniRef50_B8DQX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQX2_DESVM Length = 936 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 123/699 (17%), Positives = 227/699 (32%), Gaps = 33/699 (4%) Query: 60 GWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSR 119 G +H + T V A R + W + + + Sbjct: 224 SPGTFPGAFTGGAADGPEVYHHVLPVERGGISICTVSVGLALDGYRAEQRAAWWH-IGAL 282 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 L L + + ++ G I T +L L A Sbjct: 283 TAMAVLVALATALLLSRTVTRTVLRLSGWVRSIGPGNMGQRIRIDTGDELEGLANAFNGM 342 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAP----SLGKEKRAFTLSWLAALSVLLLL-----L 230 L R + H RD + K + A + + + Sbjct: 343 LDLLEASQRELNEAHRELERRVRDRTAQLCDANAKLHLMGEVFTHAVEGIFITDSAGTVV 402 Query: 231 CTPYENDFIAG-YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + I G + + ++ + + Sbjct: 403 AVNPAFERITGVDAQSMVGRLSPALGMVPVNGTRSVWDEMLEHGSWIGETRGPHRDGWQI 462 Query: 290 SLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE- 345 L + + + + + + + QA D LT LPN + + + Sbjct: 463 PQWLSLVSIRDETGVILNCVGVFSDITDIKQKEAQITHQANHDDLTGLPNRKHIFELLHD 522 Query: 346 -------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + + +D +F++ Y + + R L ++ + L +L G Sbjct: 523 AIARASVRGQKLAVVFIDMDGFKFINDSYDHATGDQLLCDVARRLRAALRPGDMLGRLGG 582 Query: 399 SELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E + + G +G L ++ L + + G + + + ++ LL Sbjct: 583 DEFVAAVGGISDKGHLDGIMRRLFETFAEPFEYGGMGFSVTASFGVSVYPDDGDSANALL 642 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 + ++ A+ E + T++ + I+ A+ + L QPI + Sbjct: 643 SRADIAMYRAKDMGKN-AIAVFCEEQCLEFTRRYRMDQEIKAAIAGREFRLVYQPIADAR 701 Query: 514 -KEGEGYDEILARLKYDGGIM--TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + +L + G + P F+P+ N V+E A + Sbjct: 702 TLRVRKVEALLRWERD--GAVVAPPSVFIPVAESSNAIREITRLVVEMACVQHAAWRLEG 759 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 +VN+ L I Y + P A+ +EITE N E + L Sbjct: 760 LTLPVAVNISSRCLNSDETISHIAACLNAYDVPPDALEVEITETSLMQNYERGNAMLCTL 819 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G R+++DDFGTGY++ + L R+ +KID FV++++ IV +I LA++ Sbjct: 820 RDLGVRVSLDDFGTGYSSLQYLARMPIHALKIDRTFVQELLEEGGSLEIVETILGLARSL 879 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+ VAE VET Q + L +GV YLQGY +GRP P D Sbjct: 880 RLATVAEGVETAAQLSALRGMGVDYLQGYCLGRPLPADD 918 >UniRef50_Q5P826 Response regulator receiver protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P826_AZOSE Length = 638 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 99/584 (16%), Positives = 202/584 (34%), Gaps = 20/584 (3%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 + ++ R ++ FA IL ++ G E + Sbjct: 23 AALLETAAERLRFTIMTARSGEEALRQLLEHEFATILLDVNMPGLDGFETARLIHGRPRS 82 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL 282 ++ ++ L ++ + + LC Sbjct: 83 AAIPIIFLTAHRSDELDRIKGYEAGAADYLFTP-LVPQVLQAKVGVFVELCRQRRELEHK 141 Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + + + L + + AL D LT N R+L Sbjct: 142 AALLADLNRELQVQRLEDLERANAALQTEVAERRGAEKLARELALRDTLTGFFNRRSLND 201 Query: 343 APE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 Q + L +D + ++ G ++ + L ++E + L Sbjct: 202 RLARAISVAGHQNDRLALLFLDLDRFKRVNDSLGHDKGDELLKQVAARLRCAVREADTLA 261 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 + G E +++L + + ++ + + + + + + Sbjct: 262 RFGGDEFVVLLENLHDRDDAAQVAIKICAALAQPFELGASTVKVSASVGVSLYPDDGASA 321 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ ++ + E ++ + +++ + ++ AL+ + LY QP Sbjct: 322 SVLMKNADLAMYEAKQMGRN-GHEFYREELNRRLLERIRHEHELQQALENDEFELYYQPK 380 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 N G + +L G ++ ++F+ L + + L + + Sbjct: 381 VNVVEGTIAGMEALLRWHHPQLGFLSAEQFMGLAEEAGMLVPLGEWALRAACRQARQWQD 440 Query: 569 DK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + R +VN+ L + + RL + +SP + LEITE + + + Sbjct: 441 AGWLEETVRIAVNVAEPQLYSA-LPDTLARLLDEHGLSPAHIELEITETLLMRDVDHAAS 499 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + Q+ G IA+DDFGTGY++ LK L I+KID FV+D+ + IV +I Sbjct: 500 VLAQIGATGVSIAVDDFGTGYSSLAILKALPIHILKIDQSFVRDLPHDRDTHAIVTAIVQ 559 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A A L+V+AE VE + Q L +LG QGYL +P P ++ Sbjct: 560 MAHALGLNVIAEGVENEAQLGALRRLGCDEYQGYLYSKPIPASE 603 >UniRef50_A0YUF3 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YUF3_9CYAN Length = 923 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 92/583 (15%), Positives = 195/583 (33%), Gaps = 47/583 (8%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGY 242 ++ ++ E R + + + T + GY Sbjct: 334 QLEQRIQQRTSSLKQLDQALKISEDRWKLALQGSNDGIWDWNVQTNEIFFSPRAKEMLGY 393 Query: 243 LVP------VFFIIFTLGVGKLRYPFLNLTWAV-STLCLLNYNQNFLQGVETEYSLAFIL 295 + + + + + + + Sbjct: 394 EEDNETTNHLAEWEKQIHPHDRKRVLKAIWDHLDQQTEYYSTEYRIRCKDGQYKWVLHRG 453 Query: 296 AVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------- 345 L + ++ + + + A D LT LPN Sbjct: 454 QALWNEIGDPIRMVGSQTDLSEQKQVETQLFYYAYHDSLTCLPNRAFFMDRLHLALEQVR 513 Query: 346 --QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 E + + +D + ++ G + + + L + ++ L +L G E + Sbjct: 514 QYSEHLFAILFIDLDRFKLVNDGLGHLAGDELLIRVGHKLQQCISVHDTLARLGGDEFAI 573 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR-----FDGNQETLQPLL 455 +L + + + + + + + + + + + +L Sbjct: 574 LLDPIQGISDSIIVAERILAILQQPFILEDQTVSITASIGITFSHYYTANHSYKHSTDIL 633 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--- 512 + H + + T ++ L N +R A++ L +Y QPI Sbjct: 634 RDADIAMYHAKHHST-SKYAIFDSKMQMDTLIRLRLENDLRAAIESSQLKVYYQPIVCLK 692 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-- 570 + + ++ ++ G+++P +F+P+ + L VL + + L Sbjct: 693 TGKIKSFEALVRLPDPKKGLISPGEFIPIAEETGLIIPLGEWVLRAACQQLRQWQIQGWI 752 Query: 571 -----KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + QK I + ++ + +SP + LE+TE + E Sbjct: 753 DVNVSVSVNVA----GQQFSQKKIVNLVQQILQETELSPANLRLEVTESAIAEHLEWVAR 808 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + QL + G +I IDDFGTGY++ +RL+R D +KID FV + + + ++ V +I + Sbjct: 809 RLSQLRQMGVQILIDDFGTGYSSLDRLQRFPIDTLKIDRSFVAKMTSQSSNSKFVEAIAN 868 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A + SVVAE +ET +QQ L+ +G +Y QG L +A Sbjct: 869 FAHSLGFSVVAEGIETVEQQQLIQYIGCEYGQGNLFSPAVDVA 911 >UniRef50_C6XK75 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XK75_HIRBI Length = 785 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 110/732 (15%), Positives = 225/732 (30%), Gaps = 40/732 (5%) Query: 23 VLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLS 82 + ++ + + FL+ + L + F W + W + Sbjct: 31 AFLGMAPVAAFGLTATGA--FLSILHHNSSLGPIM-FSWAYSAG-VLAYVMIRSWQLSIQ 86 Query: 83 FLQTAVM-------LGSQTFVVLCACAILRWQLGTR--WRYGLTSRYVWQRLFWLGLVTP 133 +G + +L L L L V Sbjct: 87 QPDKNFHTSQKFKKIGFWAAGIGSVWGLLIAVLIMHDQTNLALVGAVAVGMLSMGSFVLA 146 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV-VDLLSLFTAVLIYNMLFYYLTRMIVS 192 + S+ + + GD + V + L+ + F + Sbjct: 147 VLPVASLVFMLGILAGFGAGAALSGDVAFLVIVPLFLIFMVVMQRYAAWTFRNFVLQRLD 206 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 + E ++ W ++LL V Sbjct: 207 RNAVSESKEVISLLLHDFESQSSDWLWDTDENMLL--GRVSQRFAEAVKRPAEVLNSECF 264 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMV 309 L + L ++ + + + Sbjct: 265 LHFFEEDSK-EQLQELFLNQRSFRDFVVPIRIEGELRWWSISASPKRNCEGEFTGYRGVC 323 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLE 361 + ++ A D LT + N E Q + C+ +DN + Sbjct: 324 SDVTQERTAEKKIAYMAHFDALTGVHNRANFSTELEKAVERMHTQGKPFALHCIDLDNFK 383 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL----QHM 417 ++ G ++ + L + + + + +L G E +++ G + Sbjct: 384 TVNDTMGHPAGDSLLKIVAHRLSMSISDGDIVGRLGGDEFMVLQMGCNDAEEAMLTSDMI 443 Query: 418 VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + L + + L + + ET + ++ + Sbjct: 444 TDALL-EPVSLMGSVLPVSGSVGTSFAPRDGETSKEIMQHADLALYAAKQDGRGCN-RMF 501 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 E + ++ L +R AL + +L ++ QP+ + +GY+ +L + + ++ Sbjct: 502 EPKMDLDAKRRTQLEIGLRRALQENELEMHYQPLMDVRSGTIKGYESLLRWRRGENDVLL 561 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 P +F+ + L ++ + + AT P ++NL P + ++ +I Sbjct: 562 PTEFIEIAEDTGLIVPLGEWIIRTAIAEAATWPE---NISVAINLSPTQMKNPSLISTVI 618 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + P V EITE +E ++ + L G +IA+DDFGTG+++ L+ Sbjct: 619 SALANNAMDPARVEFEITESVLLEESEVNIKTLHVLRDLGVKIALDDFGTGFSSLNYLRA 678 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D IKID FV ++ T I+R++ LA+ + AE +E Q LL G Sbjct: 679 FPFDKIKIDKCFVTEMETRDDCRAIIRAVMGLARDLGMKTTAEGIENQTHVDLLKAEGCD 738 Query: 715 YLQGYLIGRPQP 726 Y+QG+L RP P Sbjct: 739 YMQGFLFSRPIP 750 >UniRef50_B8I783 Diguanylate cyclase/phosphodiesterase n=2 Tax=Clostridium RepID=B8I783_CLOCE Length = 856 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 92/426 (21%), Positives = 180/426 (42%), Gaps = 14/426 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQA------PEQEAGKSFCCLRIDNLEFMSRHYGLM 370 +++ AL D LT LPN R+L + + +DN ++++ G Sbjct: 425 QSEEKYNFMALHDVLTGLPNRRSLLEDSSRFLGINTGKKTVLLFIDMDNFKYINDTMGHE 484 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIH 427 I + L +++ LY+L G E +L++ E + + ++ + + Sbjct: 485 FGDELINKAGQRLKTALKDLGTLYRLGGDEFILLIYNIENQFEAEDFMSQVLQSFKDEFE 544 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N+ L + + + + ++ L+ ++ + + ++ Sbjct: 545 IGNSVLHITFSIGAALYPDHGNNIEDLIKCADIAMYKAKEQGKNR-YVLYDRDMDKAFSE 603 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ + + TA+D + +Y QP + + G + +L + G ++P KF+ + Sbjct: 604 RMTIEKLLHTAMDNNEFEVYYQPQFDLQSQKITGLEALLRWKSSELGNVSPIKFIKVAED 663 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 +L VL ++ G SVN+ + +LQ +II + + ++ Sbjct: 664 THLIIPLGEWVLNQACAFVKELHEKGLQGLTVSVNISTIQILQSGFTRKIIDIINSHKLN 723 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + LEITE + + + +L K G RIA+DDFG GY++ LK+L +KID Sbjct: 724 PECLELEITETILIESFTTVFRKLNKLKKMGIRIALDDFGKGYSSLNYLKQLPISTLKID 783 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 F+ + + I R I L K+ ++++AE VE +Q L K +QGYL + Sbjct: 784 KSFIDSVSIDEEGRTITRHIITLGKSLGMTIIAEGVEFNEQLEYLKKYHCDRIQGYLFSK 843 Query: 724 PQPLAD 729 P P D Sbjct: 844 PLPGED 849 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 610 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 103/607 (16%), Positives = 200/607 (32%), Gaps = 46/607 (7%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT--LSWLA 221 ++ + ++R + + A+ R + Sbjct: 137 RWLMITRVPLRDASGTIVGVVGVSRDVTAQKSAERRMRAQSGLLEMIARGMPLPNFLEEL 196 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP----FLNLTWAVSTLCLLNY 277 AL I + R F+ Sbjct: 197 ALMTAGFAKGVHAAFLTITPDPAELRLAAAPTLNEDYRKRANATFIRTVPTDLDAAAAAL 256 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVCLLYMVR-----------IYHR------------ 314 F Q +E + + ++ + Sbjct: 257 KLAFDQAGISELDHQCRCLAISDADGQIEGILALYSSEGSRFQPDFSEFVSIAVHMAGIA 316 Query: 315 --SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 R A DPLT + N L++ + + L +DN + ++ Sbjct: 317 ISRHRAEARIGFLADHDPLTGMANRALLDRKLTFAMQTADSTRSEVALAFLDLDNFKLVN 376 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM--VNILN 422 G + ++ + + L + L ++ G E +++L + E L + + Sbjct: 377 DSLGHSVGDQLLKIVASRISELTSDQGSLARIGGDEFVIILEQMDLESCLDRLSAIREAV 436 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 +R I N+ L + + + T LL ++ + ++ Sbjct: 437 TRPIVLNDIELRVTCSIGVASYPSHGSTAGELLASADMAMYRAKELGRD-GIALFTSAMT 495 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 K++ + +R AL + + +L+ QP + + ++ G++ P F+ Sbjct: 496 AIVRKKLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGLVYPGDFI 555 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 L + +L VL++ + + R SVN+ +K + + Sbjct: 556 ALAEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIETVATALS 615 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + P + LEITE + S+ +++L G ++A+DDFGTGY++ LKR Sbjct: 616 ESGLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSALKRFPLS 675 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ DI + D I +I LA+ L V+AE VET++Q L + G +QG Sbjct: 676 RLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESGCNEIQG 735 Query: 719 YLIGRPQ 725 YL RP Sbjct: 736 YLFSRPV 742 Score = 42.6 bits (100), Expect = 0.060, Method: Composition-based stats. Identities = 13/115 (11%), Positives = 28/115 (24%), Gaps = 4/115 (3%) Query: 215 FTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + L N+ ++ V F + ++ +V+ Sbjct: 62 DYIYAKDLEGRFLFANQAIVANNGLSHLKDLVGRTDFDFLPHHIAQIATDVERSVAETGQ 121 Query: 275 LN-YNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQ 325 + + E L L S ++ + R + RR Q Sbjct: 122 PHFGGEELAFRGGGERWLMITRVPLRDASGTIVGVVGVSRDVTAQKSAERRMRAQ 176 >UniRef50_A6FEH9 Sensory box protein n=1 Tax=Moritella sp. PE36 RepID=A6FEH9_9GAMM Length = 627 Score = 610 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 91/432 (21%), Positives = 174/432 (40%), Gaps = 21/432 (4%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYG 368 +H A D LT L N R L Q E + + + +D + ++ G Sbjct: 186 QSQEEFHRLAFFDSLTGLANRRLLNQTIETQYQLAKTNQVVGALLFIDLDFFKAINDSLG 245 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN- 422 + + + L + + + + +L G E +++L E + L Sbjct: 246 HAVGDGILVEVAERLKEIPRPEDFIARLGGDEFVILLPDLSENPMHAEQHANLLAEQLIE 305 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 S+ + L +G F + LL Q Q+ ++ + Sbjct: 306 RISQPYLYKGQALYIGASIGVTLFPSKDQHADDLLKQADTAMYQAKSNGRKKVY-FFDVK 364 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDK 537 + + K++ + N +++A+ + +L L+ QP +N + G + ++ ++P + Sbjct: 365 MQRKADKRLHIYNCLKSAIAKNELFLHYQPQHMVQNGDIIGVEALVRWHLGGKQQISPAE 424 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + +L + VL++ + SVN+ N ++ + Sbjct: 425 FIPIAEETDLIIDIGIWVLQAACRQFVEWQLQGVNVPQLSVNVSTRQFHDNNFVDSVLMV 484 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + P + LEITE +AE ++ + L G A+DDFG GY++ LKRL Sbjct: 485 LDETGMDPMQLNLEITESVVIEHAEDAIRKMTDLKNIGVSFAVDDFGVGYSSLSYLKRLP 544 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 A+ +KID F++ I N D IV ++ +AK +V AE VE++QQ L + + Sbjct: 545 ANELKIDRSFIQGIPYNVSDMAIVEAVLAMAKHMGFNVTAEGVESRQQLEFLQRQQCSFY 604 Query: 717 QGYLIGRPQPLA 728 QG+ +P Sbjct: 605 QGFYASKPLTGE 616 >UniRef50_B7ITK1 Sensory box/ggdef family n=144 Tax=Bacillus cereus group RepID=B7ITK1_BACC2 Length = 914 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 94/623 (15%), Positives = 205/623 (32%), Gaps = 27/623 (4%) Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDAD-AIFTVVDLLSLFTAVLIYNMLFYYLT 187 LV + ++ + + + + G+ IF ++ + Sbjct: 270 ALVVFPYLAVAILIGFTLKEQTSSSTLITGNCITFIFVLIRHSIVRMQNNSLTKRLQAFN 329 Query: 188 RMIVSPHFAQIL-WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAG 241 + + K+++ +L + + L + G Sbjct: 330 AQLEEKVTLRTSDLVHKSEALSQKQQKFKSLYEYHPDPIFTIDLNGIFLNVNKAGSVLLG 389 Query: 242 YLVPVFFIIFTLG--VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL- 298 + + ++ V + + Y L + + Sbjct: 390 APTDELLGETCFSIILDEDKHKLALALEKVKQQESASLQLSSQYKDGFTYFLYVTIIPII 449 Query: 299 -ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 MV+ + A D +T + N + ++ + Sbjct: 450 IDGQISGSYIMVKDITALKKQQEEIKYLAFHDTVTKIGNRAFFHKKLKRVIKNAKIAGSE 509 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + + + + + + L ++ G E +++ Sbjct: 510 FALLYLDLDRFKAINDTLGHSSGDYILEEVAKRFQSCLPSHTHLSRIGGDEFTIIIENYT 569 Query: 410 TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E L + N L + + L + + + LL + + Sbjct: 570 DEDYLFQLCNQLFECMKKSFIIHEHKLTLSLSIGIAIYPHSGIDTATLLKNANVAMYDAK 629 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 A +L +++++ + +++ L + AL +L L QP + + G + ++ Sbjct: 630 AKELN-SLSIYDDVIAKKIERRLRLEKDLPNALQNEELFLLYQPQVDSESNKIIGAEALI 688 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPL 582 + GI++P +F+P+ + LE K + + VNL Sbjct: 689 RWNHPELGIISPYEFIPIAEETLQIISIGKWTLEQACKQMKRWHGLGYSHLKIGVNLSAK 748 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q++ I + ++ LE+TE A + ++ + L G I+IDDF Sbjct: 749 EFEQEDFVRSISSTLTNTGLPASSLDLELTERIAMMDERETLIKLRTLKSLGIHISIDDF 808 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L D +KI F+ T I+++I LA +SV+AE VET+ Sbjct: 809 GTGYSSLAYLPLYPIDTLKIPREFITMSETCDDGMEIIKTIITLANTLGMSVIAEGVETK 868 Query: 703 QQQALLHKLGVQYLQGYLIGRPQ 725 + L K Q++QGY +P Sbjct: 869 EHVNFLQKNKCQFIQGYYYSKPI 891 >UniRef50_Q07MF6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07MF6_RHOP5 Length = 802 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 117/751 (15%), Positives = 224/751 (29%), Gaps = 35/751 (4%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGW 61 + + F + S S + + LA + + ++ I Sbjct: 50 LALVAISSGFGTWATHFIAMLAYHP-STHASYHLGLTLLSLALAILIIGAGAAVALIGPS 108 Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGT----RWRYGLT 117 R + G L + + M + + L Sbjct: 109 RWYAGI--GGAVIGLGIAAMHYCGILAMQAPLLLIWSQETVLASIVLAVAFSIPGAIIGA 166 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 R + L+ + + S + L+ A Sbjct: 167 RRDELGYMLLASLLFAASVLSLHFTAMSAITALPDPDQTAVGPALTAPSLALVIAGAAAA 226 Query: 178 IYNMLFYYLTRMIVSPH---FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 I ++L I + L Sbjct: 227 ILGGCLIAALTDRRFRAVNARQKLLLDIAIENMPQALCMFDAEGNSTLFNSHYADLMGIP 286 Query: 235 ENDFIAGYLVPVFFII--FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + L+ F + G R + ++ +S + N + L Sbjct: 287 ADRLNGMNLLDQFELRKSHGKLAGDPRAIYESIMAQISAGRPIVKTDNLIVPG---RVLR 343 Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------E 345 L + + R A D LT LPN + Sbjct: 344 ITEQPLPG--TGWVTTIEDVTEWRKTQERIAHLARHDALTDLPNRTTFREEIDRVLRYTR 401 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV- 404 +E G + + +D+ + ++ G + + + R L +++ + + +L G E ++ Sbjct: 402 REVGAAVLYIDLDHFKEINDSLGHPIGDELLIEVARRLADCIRDGDLVARLGGDEFAVIQ 461 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 +S E E + + S + +G + L+ + Sbjct: 462 ISHHEPESDAAALAMRIVSIISTPYELQGHHVSIGASVGIALAPTDASEPDELIKKADLA 521 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG 518 ++ A + E + + LL +R AL + + L QPIR+ + Sbjct: 522 LYRAKAEGRG-SYRFFELDMDASAQTRRLLTTELRLALARNEFALLYQPIRDVESDQIIC 580 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVN 578 ++ +L + G + P++FL L L VL++ A SVN Sbjct: 581 FEALLRWEHPERGEILPEQFLALAESSGLIVPIGDWVLQTACADAAQWHS---DVGVSVN 637 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P + + ++P + LE+TE + +M ++ L G ++ Sbjct: 638 LSPSQFRHPRLVPSVAAALTASGLAPHRLELEVTETALLQQRKPAMAALKALRALGVGVS 697 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +D FG GYA+ L D IKIDG F+++I + + ++T L K + A Sbjct: 698 MDHFGAGYASLSSLSSFPFDRIKIDGSFIQEIEQSGDAFAALTAVTGLGKRLGRTTAATG 757 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET Q A+L G +QG LI P+ + Sbjct: 758 VETVHQLAMLRATGCAEIQGLLISPPRSAHE 788 >UniRef50_Q2BQ13 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ13_9GAMM Length = 1010 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 106/564 (18%), Positives = 208/564 (36%), Gaps = 36/564 (6%) Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVF 247 ++ ++ A +L+ ++ I GY Sbjct: 429 RLVDITERKQVEQTLQLS----ASVFTHAREGILITERDGTIVDVNDALLQITGYKKEEV 484 Query: 248 F---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS-- 302 + + +L ++ + + Y+ ++ + Sbjct: 485 IGQKPSLFSSGHHGKEFYHSLWNDITEKGYWSGELWNKRKNGDIYAQMLTISSVKDGENE 544 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCC 354 + ++ + ++ L A DPLT LPN R + + + + Sbjct: 545 GYFVALLSDITTIKEQQKKLELIANFDPLTGLPNRRHIIELLHEGMANAMKQMKTLAVFY 604 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL-LVLSGPETE-- 411 L +D + ++ YG + ++ + M + + + ++ G E + P + Sbjct: 605 LDLDGFKDINDTYGHEYGDQLLVTLANRMSKAMGQQDIVGRVGGDEFIGAFFEEPNSVFT 664 Query: 412 GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN-QETLQPLLGQLSWLAEQSCAHHH 470 +L H++ ++ I L + + L+ + Q+ Sbjct: 665 DKLHHILEQ-LAKPIFVEGYKLQVSASIGVTLYPQQRSTDADKLVREADQAMYQAKLAGK 723 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 + Q L IR AL++G+ +L+ QP N + G + ++ Sbjct: 724 NR-YHFFDAEKDQYIRGQHQALEDIRRALERGEFVLHYQPKVNMFTGQICGAEALIRWQH 782 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 + G++ P F+P I+ LS D V+ + LK + SVN+ PL L Sbjct: 783 PEEGLIMPGDFIPTISAHPLSVDLDEWVILTALKQIELWLHSGFDIPVSVNISPLQLQDS 842 Query: 588 NIAGRIIRLFKRYHISPQ---AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + R+ +L + +SP + +E+ E A N +++ IE+ G ++DDFGT Sbjct: 843 EFSKRLEKLL--HTVSPAARTRLSIEVIESHALENMSTALNAIEESKALGISFSLDDFGT 900 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL + +K+D FV ++ N D I+ + LAKA ++ E VE+++Q Sbjct: 901 GYSSMSYLKRLPVEELKVDRSFVHGMLNNQEDLAILSATIGLAKAFDKKILVEGVESEEQ 960 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L LG Q QGY I +P Sbjct: 961 GQRLLSLGYQEAQGYFISKPISAD 984 >UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF4_JANMA Length = 914 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 109/605 (18%), Positives = 206/605 (34%), Gaps = 20/605 (3%) Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW 200 +VG D L T D + LF +I ++ L + + Sbjct: 299 AIVGMSQDSVLARYTVHRDTIRNAAIAITTFLFVFAVIAVVMSLRLAWKSHRLDAVRNTY 358 Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R + V ++ G V +R Sbjct: 359 RIATEFGNEGYYIWSAIQDRNGYLVDFEIIDCNERGATFFGTSKEKLLNTQLSTVEFIRG 418 Query: 261 PFLNLTWAVS-TLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 L + Y +F + + + L R + Sbjct: 419 YLYTLMQQSRIAMEKGFYEDDFEMQAHNQGWIHKRMLRCED---GLAVTFRDVSDRKAHE 475 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 H A D LT LPN L E++ + + +D+ + ++ G Sbjct: 476 EELHRLATKDTLTNLPNRYWLMNHLPKALNEANEKQDSLAVLFIDLDDFKNINDTLGHSS 535 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW 428 ++ + L +++ + + +L G E L+L + + + N + + Sbjct: 536 GDSLLQVVASRLESVLRPGDSVVRLGGDEFTLLLESLPLQEDISLIANRIMQTFNQPFEI 595 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 L + R+ + + LL + A + ++ + + + Sbjct: 596 QQKMLTISASMGISRYPFDGRDAETLLKNADIAMYSAKADGKNK-VRVYDKKLYEEIELR 654 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 V + A+ + ++Y QP G + ++ + G++ PD F+PL Sbjct: 655 VDGERQLARAIQEDHFIVYYQPRVEAQTGRMVGMEALVRWAHPERGLIAPDHFIPLAEST 714 Query: 546 NLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 + V+E + +A SVN+ + N++ I +Y + P Sbjct: 715 GMILPLGRLVMEKVFCQIAAWQFQKLAVVPVSVNVSARQFDEGNVSEFIASCLNKYAVDP 774 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + +E+TE N E I + G +I +DDFGTGY++ L + D++K+D Sbjct: 775 RFIEIELTESAMMGNFEQVRGEISSISALGIQIHVDDFGTGYSSLSLLYKFNMDVLKVDR 834 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F I + SI +AK + VVAE VET +Q +L +LG +QGYL+ +P Sbjct: 835 AFTSQICNGKGGEIFFSSIVSMAKVLKMRVVAEGVETIEQLRVLQQLGCDEIQGYLVSKP 894 Query: 725 QPLAD 729 P +D Sbjct: 895 IPSSD 899 >UniRef50_D0J677 Diguanylate cyclase/phosphodiesterase n=2 Tax=Comamonas testosteroni RepID=D0J677_COMTE Length = 829 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 112/561 (19%), Positives = 202/561 (36%), Gaps = 22/561 (3%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 Y R I + R + A V++ + + L Sbjct: 239 YSYRDITVESSSATELRLAARVFESS---LDGIFIADANGVIVQVNPAGGQLLHGKAVLG 295 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + +F G + N Q ++ L Sbjct: 296 LAAWTLFESEGGPVSDLLELAAARWDVGSFWEGNLWLKQSEGQRCAVWLSWVALRDGYGR 355 Query: 305 LL---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 L+ +R ++ A +D LT LPN +L + + S Sbjct: 356 LVQSIGFMRDMTMQRSAQKQIEQLAYSDALTGLPNRLSLSRHVQAAITAARFTQQPFSIL 415 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G ++ + + L L++ + L + G E +L L EG Sbjct: 416 FLDLDRFKIINDSLGHDFGDRVLKLVAQRLSGLLRPADVLCRQGGDEFVLYLHDCTGEG- 474 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + G + +F + TL L+ Q + Sbjct: 475 ASAVAARILDEMRQPFMLDGLGFSVQCSIGAAQFPADGLTLDELIRQADIAMYRVKERGR 534 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + +S ++ L + +R ALD+G + ++ QP + + +L Sbjct: 535 G-NFSFYQPQMSAGLLSRMKLEHAMRQALDKGHMAVHFQPQVHIRSGRIVAAEALLRWTD 593 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 + G+++P F+PL + D VLE ++ A + SVN+ L Q Sbjct: 594 PELGVISPAAFIPLAEESGYVVALDAWVLEQSVQEAARWLAMDMPVKVSVNVSALEFRQP 653 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + R+ + + + Q + LE+TE A+ + Q+ + G + IDDFGTGY+ Sbjct: 654 DFVDRLKYVLEASGLPAQWLELELTESILLQEAQEMALRVHQIAELGVGLVIDDFGTGYS 713 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+L IKID FV+ + + D IV +I + +A + +VAE VETQ+Q Sbjct: 714 SLAYLKKLPISKIKIDQSFVRGLPHDAGDKAIVGAIISMGQALGVELVAEGVETQEQCQA 773 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 + +L Y QGYL P Sbjct: 774 IEQLQGDYFQGYLCSPALPAE 794 >UniRef50_B4VXK2 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VXK2_9CYAN Length = 884 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 88/512 (17%), Positives = 188/512 (36%), Gaps = 31/512 (6%) Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 ++ L + +PFL ++ L + + + V + Sbjct: 338 EAMRLLPELLDSEAEHPFLAEMPSMIRLMQQQSSLRREVKIGEIVYEQVLHYVPEIECIR 397 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------------- 349 + + + A D LT L N +Q Sbjct: 398 IYAL--DITDRKRAEELLLFNAFYDRLTGLANRALFMDRLQQAGRRAQPSQGENRDSPSY 455 Query: 350 -KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L ++ + ++ G + ++ + L ++ + + +L G E ++L G Sbjct: 456 RFAVVLLNLNRFKVVNESLGNHLGDQVLQEFGQRLQNCLRPTDTVARLGGDEFAILLEGI 515 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE---TLQPLLGQLSWLA 462 + + + + + + + M + + +L + Sbjct: 516 QGVCDAIQVADAIEQTLTLPFNLEGRDVFMTTSIGIALNTNRDRQVLSAENILRNANTAM 575 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 ++ + + + T ++ L +R A+++ + ++ QPI + + G+ Sbjct: 576 HRARSQGK-PGYAIFDNQMLSPTVDRLQLETDMRRAIERQEFQVHYQPIVSLLTHQITGF 634 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFS 576 + +L G++ P +F+P+ + L +L + L+ + + Sbjct: 635 EALLRWQHPQRGLVFPAEFIPIAEETGLIIPMGWWILREACRQLSIWQQQFQSPQPLTMN 694 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q ++ +I ++ + +I+ ++ LEITE N E + +L K Sbjct: 695 VNLSCKQFTQPDLLAQIDQILEETNIAVGSLKLEITESVVIDNPELVKDLLLELKKRQIH 754 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 + IDDFGTGY++ RL +KID F+ I ++ IV++I LA+ S+ VVA Sbjct: 755 LCIDDFGTGYSSLSRLHNFPISTLKIDRSFISRIGALGENSEIVQAIITLARTMSMDVVA 814 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E +E +Q + L L Y QG+L +P Sbjct: 815 EGIELLEQVSPLVALQCHYGQGFLFSKPVDSD 846 >UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L914_MAGSM Length = 1264 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 101/679 (14%), Positives = 221/679 (32%), Gaps = 39/679 (5%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 ++ + + ++ + + L Q Sbjct: 571 LFASAALGMALIDAKQRVVDANPALMQMLELSHHRDALPPLAQLAHPQDQQ--------- 621 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + + + G ++ ++S + + + Sbjct: 622 EVAARLDAVIEGRSPQENCEVRCLCEARHLTIWTRMVISPIVLESNLTPMVVVIVEDVTQ 681 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV---FFI 249 ++ R + ++ + ++GY + Sbjct: 682 RRRSEEALRLAATVYESTNE---SVVIFNGEG---RVEQVNQAFCRLSGYTAREVRGLEL 735 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLL 306 L + F + A++ + + S L+++ + + Sbjct: 736 RHLLSARYEKSQFDEMAQALALTGHWSGEVMGQRKQGALASERLSLSLVRRPDGSTQNTI 795 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + + QA DPLT LPN R + + L +D Sbjct: 796 AVFTDLTEQKAQEELIWRQANFDPLTSLPNRRLFQDRLHQALAQADRSAGRVALFFLDLD 855 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G ++ + ++ ++ + +L G E ++L + L + Sbjct: 856 RFKPINDTMGHQAGDELLQKCAERINAAVRSSDTVARLGGDEFTVILPNIQNGQDLSRIA 915 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + ++ + + + + L+ Q+ H + Sbjct: 916 EGIIKTLTEPFYLKAGEANISTSVGVAVYPDDSQDDEGLMRAADAALYQAKDHGRN-NVQ 974 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 E ++ Q +++ L +R L G+L L QP + G + ++ G + Sbjct: 975 FFTESLNQQILERIALEKGLRRGLGAGELFLVYQPQVEVSSGRLSGAEALVRWRLPTGEV 1034 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLL--QKNI 589 + PD+F+P+ + L + V+ ++ + PR S+N P + Sbjct: 1035 VMPDRFIPMAEESGLIVQVGEVVVSLAVQQIRAWLDAGFEPPRISINASPKQFHLDGGGL 1094 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ Y ISP + +EI E +N E S + L K G + +DDFGTGY++ Sbjct: 1095 TSILMSTCDAYQISPSRLAVEIVESGLMANPERSGEILAGLAKLGVEVELDDFGTGYSSL 1154 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 RL RLQ +K+D F+ I + + ++V ++ +A+ + V+AE VE +Q L Sbjct: 1155 ARLSRLQIQALKLDRRFLVGIPEDPQNRILVTAMVQMARGMGIEVIAEGVEDLRQMGFLQ 1214 Query: 710 KLGVQYLQGYLIGRPQPLA 728 LG QG+ I RP Sbjct: 1215 DLGCHRAQGFGIARPMEPE 1233 Score = 68.8 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 33/405 (8%), Positives = 88/405 (21%), Gaps = 95/405 (23%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR 62 ++ + + + L +V+ + +P ++ +PL + +++ FGW Sbjct: 161 AGSTVVHAVGGW-FSLALLLVIGPRTGRFNPDGSVNPITAS--NLPLTTLGALILWFGWI 217 Query: 63 ----------------GVVPVLCGMFCTNLWNFHLSF--------LQTAVMLGSQTFVVL 98 V+ G ++ S+ L + V Sbjct: 218 GFNGGSTLSLDARIGPVVLATCLGAVGGSMGALLWSWWREGRPSVLSAINGTLAGLVAVT 277 Query: 99 CACAILR--WQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTF 156 L LG + + + G+ +G G + + + Sbjct: 278 AGAHALSPLAALGAGLLAAPVALLMENWMLRHGIDDAVGAVPVHLGAGVWGTLAVALLGD 337 Query: 157 F-----GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH----------------- 194 G + L + A L+ ++ + + R+I Sbjct: 338 LHKLGTGLSRLEQLWAQLQGVLAAALVAFVIPWLVLRVINRRFPMRVTPEQEWQGLNISE 397 Query: 195 ------------------------------------FAQILWRRDIAPSLGKEKRAFTLS 218 + + + + Sbjct: 398 HGTQTELSSFLGVLRAQAEGGDLSLRAEVDPFSEVGLIADRYNHVMDAMEAAVAKTRAVF 457 Query: 219 WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL--- 275 A ++L++ + I + + +L V+ Sbjct: 458 QTAGDAILIID----PHSGQITAHNPMAEAVFGRSSAAFAHLTLSDLVVGVTPQRFWLGL 513 Query: 276 NYNQNFLQGVETEYSLAFIL-AVLISFSVCLLYMVRIYHRSEWLN 319 + + L + L+ R + Sbjct: 514 HEEGEGRLPDGHTFPLELAITRASHGDGEMLIGTFRDIRARKQAE 558 Score = 59.6 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 32/373 (8%), Positives = 78/373 (20%), Gaps = 54/373 (14%) Query: 9 KNIKIFTLAFTLTV--------VLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 ++ + L +L + + L + ++ + +P V+ I F Sbjct: 322 LGAGVWGTLAVALLGDLHKLGTGLSRLEQLWAQLQGVLAAALVAFVIPWLVLRVINRRFP 381 Query: 61 WRG-----VVPVLCGMFCT---NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGT-- 110 R + T + Q S V + Sbjct: 382 MRVTPEQEWQGLNISEHGTQTELSSFLGVLRAQAEGGDLSLRAEVDPFSEVGLIADRYNH 441 Query: 111 ---RWRYGLTSRYVWQRLFWLGLVTP--------------------IGIKCSMYLVGSFF 147 + + ++ + + Sbjct: 442 VMDAMEAAVAKTRAVFQTAGDAILIIDPHSGQITAHNPMAEAVFGRSSAAFAHLTLSDLV 501 Query: 148 DFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPS 207 + G + + F L + M++ ++ Sbjct: 502 VGVTPQRFWLGLHEEGEGRLPDGHTFPLELAITRASHGDGEMLIGTFRDIRARKQAELAI 561 Query: 208 LGKEKRAFTLSWLAALSVLLLL-----LCTPYENDFIAG--YLVPVFFIIFTLGVGKLRY 260 E R TL AAL + L+ + + + + L + + Sbjct: 562 KASEARFRTLFASAALGMALIDAKQRVVDANPALMQMLELSHHRDALPPLAQLAHPQDQQ 621 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQ---GVETEYSLAFILAVLISFSVC---LLYMVRIYHR 314 AV N +++ ++ S ++ +V + Sbjct: 622 EVAARLDAVIEGRSPQENCEVRCLCEARHLTIWTRMVISPIVLESNLTPMVVVIVEDVTQ 681 Query: 315 SEWLNRRWHLQAL 327 L A Sbjct: 682 RRRSEEALRLAAT 694 >UniRef50_Q46PR7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=3 Tax=Cupriavidus RepID=Q46PR7_RALEJ Length = 1076 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 114/684 (16%), Positives = 219/684 (32%), Gaps = 50/684 (7%) Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 + V +L +G + R + GI + + Sbjct: 366 MALAPDGFLVTDADGKVLSASPRAMQLFGAGIDGLQGRALADLVPGVAGIAMASVAPSAQ 425 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 ++ D + L A ++ + Sbjct: 426 ASAQRELQGVRVDGSRFPLRAGMARLPGANAGEPARSLWILTDL-------DELWHARQQ 478 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTP------------------------YENDFIAGY 242 + + R +L+ A + V+ Y + +A Sbjct: 479 AAVQAGRYASLADHAPMCVITFDEDGRITDINRTGQHMLWYPGPAQGAGIRYADLHVADE 538 Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA---VLI 299 L + + L + +++ + + L Sbjct: 539 LAERARDLTRELGETIAPGLPALVAKARLGLVDEREWTWVRKGGSRVPVQVTLRELPAED 598 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKS 351 + ++ AL D LT LPN L + + Sbjct: 599 GQPRQYQAIACDLTERHRVDEYIRHLALHDALTGLPNRAELTERCEAVLLHARRHGERVA 658 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ G + +R+I L +++ + + ++ G E +VL G + Sbjct: 659 LLLLDLDHFKHINDSLGHPVGDDVLRTIADRLKAAVRQGDLVARMGGDEFAVVLGGLRHD 718 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + S + L + F + E+L LL + Sbjct: 719 TEAELAASKILARVSEALEIGGQRLRVTPSLGIAMFPADGESLTDLLKSADAALYAAKQG 778 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 L ++ + ++ + +R A+D+ + L QPI + G + ++A Sbjct: 779 GRAQ-LRRFASEMAEASLARLTIEGLLRRAVDEQEFTLRYQPIVDTSTLAVTGVEALMAW 837 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL 584 + G+M P +F+P+ Q L L + + + +VN+ PL L Sbjct: 838 HTPERGMMQPSEFIPIAEQCGLIGALGEWALATACSDIQALRTALGRDIEVAVNISPLQL 897 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q + R ++ + P ++ +E+TE E+++ +L + G +++IDDFGT Sbjct: 898 RQPGFPDLVARTLQQAGLPPGSLTIEVTEGILVEGGETTIDTFLRLRELGVQLSIDDFGT 957 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+ L RL +KID FV D+ D ++ +I L L VVAE VET Q Sbjct: 958 GYSGLHYLTRLPISRLKIDKSFVDDVARPGHDQVVAAAIIALGHQLHLKVVAEGVETMAQ 1017 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 L G LQGYL R Sbjct: 1018 FEFLRAQGCDALQGYLFCRAVGPD 1041 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 608 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 88/431 (20%), Positives = 175/431 (40%), Gaps = 20/431 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 R L + QA D LT LPN + A + + +D + ++ Sbjct: 415 RHHQLTAQLRHQAQHDALTGLPNRSLFTERLAEILEQSERSRASTALLFVDLDEFKGVND 474 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + ++++ LL + + + ++ G E LVL E + + + Sbjct: 475 TVGHHVGDYVLQAVADRLLGCARRGDVVARVGGDEFTLVLPFAEEPH-AITVARRVLNEL 533 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 +G Q LL ++ E ++ Sbjct: 534 TRPFVVQGRAFHLGASIGISVSPQAGRDGQTLLRHADLAMYRAKRE--KSGFAVFEAQLN 591 Query: 483 GQTTKQVLLLNTIRTALDQ--GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 Q ++ L + +R AL + +L L+ QP + + G + ++ G+++P + Sbjct: 592 QQAQLRLQLASDLREALREPGANLELHYQPQVRLHDGQVVGAEALVRWRHPHLGMVSPAQ 651 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+P+ + V+E + G R +VN+ L + + + Sbjct: 652 FIPVAEDTGMIVPLGTWVMEEACRQAVAWAAAGHGAMRVAVNVSALQFARPDFVDTVSAT 711 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + + +E+TE + + S+ +E+L G +A+DDFGTGY++ L+RL Sbjct: 712 LRATGLEAGRLEVELTESAVMEDVKESVERMERLRALGVSVAVDDFGTGYSSLSYLQRLP 771 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +++KID F++++ N +V++I LA+ +L VAE VET ++ L ++G +Y Sbjct: 772 LNVLKIDRTFIQNLGVNATSRSVVQAIVGLAQHLNLECVAEGVETPDEREALIEVGCRYA 831 Query: 717 QGYLIGRPQPL 727 QG+ +P P Sbjct: 832 QGFFFAKPLPA 842 >UniRef50_B8HRL0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRL0_CYAP4 Length = 905 Score = 608 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 112/635 (17%), Positives = 210/635 (33%), Gaps = 46/635 (7%) Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 L +V + ++ + + PL+ + + + L + T L Sbjct: 268 LLQAVVVGGLMCLILLFALVVWVVLPLRSLSQALVVEDASLIHKLSTAKTEFGELAQLIL 327 Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY---------- 234 + + E+R + A + L Sbjct: 328 KFFHQKELLLSEIAVRKSVETELRQSEERYVLAAAGANDGLWDWDLQQNQIYFSNRWKSM 387 Query: 235 ---ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 I + I ++++ Y + + Sbjct: 388 LGFAELEIPNQVEAWLERIHPEDREQMQHCLQEHLE--GKSEHFEYEYRMRLKDGSYRWM 445 Query: 292 AFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA 348 + + + AL DPLT L N L + Q Sbjct: 446 LCRGLAVRDQVGQAYRIAGSQTDLTDRK---------ALYDPLTHLANRSLLMERLRQAM 496 Query: 349 G---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D ++++ G + + I L L + + + +L G Sbjct: 497 QIRERYPARLFAVLFLDLDRFKWVNDSLGHWIGDRLLIEIAARLKALSRSEDTVARLGGD 556 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +L+L+ T + + + ++ + G D ++ + LL Sbjct: 557 EFVLLLANLSTPAEAIAVASRIQHTLAQVFEIEGHTIYTGTSIGIAFADHLEQKGEELLQ 616 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---N 513 QS + + + + T+ ++ L +R AL+Q LLLY QPI Sbjct: 617 YADMAMYQSKSRGGN-NVQVFDTAMRVGTSNRLKLELELRQALEQQQLLLYYQPIVCLST 675 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---K 570 +G++ ++ G+++P FLPL + L +L++ + + Sbjct: 676 GTLQGFEALVRWQHPQAGLLSPVDFLPLAEETGLILPIGTWILQTACSQMYSWQQQIQAD 735 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVN N +I + ++P + LE+TE +AE + + QL Sbjct: 736 VPLSISVNFSTRQFFHPNFLQQIQTILSETGLAPHCLKLELTEHTMIEDAERAARLLSQL 795 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G I +DDFGTG+++ L +KID F + + ++ IV+++ LA Sbjct: 796 NALGIDIQLDDFGTGFSSLSHLHEFPIHTLKIDRCFTQQALDSSRHKEIVQAVVTLAHNL 855 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 LSVVAE +ET+ Q L LG Y QGY P Sbjct: 856 GLSVVAEGIETKAQYEQLRNLGCDYGQGYFFTPPL 890 >UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKT0_9GAMM Length = 812 Score = 608 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 108/571 (18%), Positives = 217/571 (38%), Gaps = 33/571 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLV 244 + + I R + E L +L ++L + + Sbjct: 231 VETVQQLLIENRENHHALERSENSLKQLINRVPQLILAVNSEGIVLFCNRKFAEFYSCRI 290 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYN-----QNFLQGVETEYSLAFILAVLI 299 + L + + + L ++ + + + + A + Sbjct: 291 DEVAGLSLLQLHNVDHEVEELNQIRRSVEVNQTEEAVTDFIWSSQTGKKLHFSITAAPFV 350 Query: 300 SFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK-------- 350 FS L++ + + A D LT LPN L EQ Sbjct: 351 YFSEPATLFVATDISEQKMVQDHISYMANHDTLTGLPNRALLNDRLEQALAASRRSGDLN 410 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D+ + ++ G + ++ + L+ ++ + + +L G E +++L ++ Sbjct: 411 ALMFIDLDHFKNINDSLGHGVGDLLLKKVAEILINEVRSCDTVARLGGDEFVILLQAFQS 470 Query: 411 E-----GRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + ++ + + + S+ I L +G F +TL L+ Sbjct: 471 DVDQVTQDVERVCHKLLTILSQPIEVKQHQLRIGASIGVVLFPMADKTLDDLMRFADTAM 530 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYD 520 + + + +S KQ + + + A+++ ++ QP+ + E G++ Sbjct: 531 YHAKENGRN-GFAFYHQAMSLAVEKQQNMESELHQAIEEEQFCVHYQPLVSVGGEIIGFE 589 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSV 577 +L + G+M P +F+P + L +L + + SV Sbjct: 590 ALLRWQHPEKGLMPPAEFIPSLEVSGLIVPVSNWLLGHCSRQIVKWKETGFWQPDWYVSV 649 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ PL Q ++ + + + LEITE A N E ++ ++ + + G I Sbjct: 650 NISPLQFYQADMVPTMQQAISEGGAHLTDICLEITETVAIENIEFAVNRLKVIRELGMMI 709 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 A+DDFGTGY++ LK L DI+KID FV+++ + IV ++T++A+A L VVAE Sbjct: 710 ALDDFGTGYSSLSYLKDLPIDIVKIDRSFVQELGQKSKSQSIVEAVTNIARAYELKVVAE 769 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +E+ Q L H +G QG+ I RPQ Sbjct: 770 GIESHDQLMLAHNIGCDIFQGFFIERPQVAE 800 >UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMJ7_9PROT Length = 829 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 91/430 (21%), Positives = 185/430 (43%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + A DPLT +PN + E+ + L +D+ + ++ Sbjct: 387 EIAKRETQLDELAHVDPLTKIPNRVMFIETLEKSISRAKRLNTKLAVFFLDLDDFKNVND 446 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + I + L +M+E++ + ++ G E +++ E+ + + + Sbjct: 447 TLGHYVGDKLLIEIAKNLSIVMRESDTISRIGGDEFNILIEDLESLSHIGEIAEKFIKQM 506 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 ++ N + + + + E LL ++ + + + Sbjct: 507 TIPLYIENNAITISGSIGISIYPDDGEDTTTLLKNADLAMYKAKDNGRNQ-YSFFSKELE 565 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFL 539 +K++ +L ++ A+++ + LY QP + + + ++ + G ++PD F+ Sbjct: 566 VSLSKRINMLKELKEAVNRDEFRLYYQPKFSLIDGSIKSAEALIRWDSKEFGFVSPDDFI 625 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFK 598 PL + V++ + A+ G SVN+ + + +I + Sbjct: 626 PLSEDSGEIVKIGAWVIKQACEDFASWSELGLGITQVSVNVSNVQFTRDDIVKVLSDNII 685 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + ISP+++ +EITE ++E ++ + + K G +A+DDFGTGY++ LKRL + Sbjct: 686 KSGISPESIEVEITESYMQEDSERALQILHDVRKIGVDLAVDDFGTGYSSMSYLKRLPIN 745 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ DI + D I R I LAK L++ AE +ET +Q L ++GV QG Sbjct: 746 RLKIDRSFIGDIPHDVDDVEITRIIVALAKTMGLAITAEGIETLEQMHFLQEMGVDEGQG 805 Query: 719 YLIGRPQPLA 728 Y+ +P P Sbjct: 806 YICSKPLPYE 815 >UniRef50_Q31JB1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JB1_THICR Length = 697 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 101/555 (18%), Positives = 207/555 (37%), Gaps = 23/555 (4%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 + R + + +K A W + + T + + Sbjct: 135 LIEDQLRTSQSQLMYAQKLAKLGYWEW-DTKADQVTGTGSAFELFGIPNQADVTLEQFFS 193 Query: 255 ---VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYM 308 L + A + + L + + + V + Sbjct: 194 NIIPKDLPLIQQAIADASQGYNDIQVSFRVLHHDNSLSHVDCLGEVSFDEHGDISRITGS 253 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------EAGKSFCCLRIDNLE 361 + R Q+ D LT L N + + + L ID + Sbjct: 254 AQDISRLHKAETLIDYQSSHDKLTDLANRSFFNKNLANFIKEANPKKYSATVILDIDRFK 313 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ + G +R++ + L + +E++ + +L E +++ E L ++ + Sbjct: 314 KINDNLGQENGDALLRTVAQRLKKVTREDDFVARLGSDEFAILIKNTEDAQELNLSLSRI 373 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 S+ + + L + + + + + L+ + Q+ + Sbjct: 374 FHDISKAFNVKDQELFITFSIGISIINQDGDQASELIAHANIARSQAKLKGGNQ-FLFYQ 432 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTP 535 ++ ++ +Q++L N +R ALD+ ++ +Y QP + + G + ++ GI++P Sbjct: 433 AEMNAESKEQLMLENDLRKALDRNEIEVYYQPQIDGHSLKPYGAEALVRWKHPTEGIISP 492 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRII 594 F+P+ + VLE+ +K + R +VNL N+ + Sbjct: 493 GIFIPMAESNGMIVDIGRFVLENAIKEAEKWHAEGFDEMRIAVNLSGRQFSSSNLIKEVQ 552 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + + + LEITE A SNA+ ++ ++ L G ++IDDFGTGY++ L Sbjct: 553 EVLQNTTLPAKYLDLEITESLAMSNADHNISILKGLKAMGVSLSIDDFGTGYSSLAYLHS 612 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D IKID F+ ++ + IVR+I +A + SL VVAE +E + L Sbjct: 613 FPIDAIKIDRSFIDNL-ESQEGQAIVRTILAMADSLSLKVVAEGIEEEFHVTFLQNKNCD 671 Query: 715 YLQGYLIGRPQPLAD 729 QG++ G+P P D Sbjct: 672 IFQGFMFGKPMPAGD 686 >UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desulfovibrio RepID=C4XGC1_DESMR Length = 725 Score = 607 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 107/557 (19%), Positives = 192/557 (34%), Gaps = 37/557 (6%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLL--------------LLCTPYENDFIAGYLVPV 246 EKR L + LLL +L + Sbjct: 156 HHTEQELRRSEKRYRELFSAMLNAFLLLRHCPGSSQGQDDFEILGANPAFERATSLSNDE 215 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 PF T A Y LA + + Sbjct: 216 IVGHTLRQTLPGIEPFWIDTLAAVAATGRPVRFENYLSDLNMYFLAQAYSP---QPGQVA 272 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRI 357 + + R + D LT LPN + L + Sbjct: 273 VALEDVTERKRGEERLRYRTFHDALTGLPNRALCLDRIARAIERAKRRSNYIYALLFLDL 332 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G ++ +R + L +++ + + ++ G E +++L + G + Sbjct: 333 DRFKLVNDSLGHLVGDGLLRRVADRLRREVRQLDTVARVGGDEFVVLLEEIASPGDALRI 392 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + + + + + E + LL + + + + Sbjct: 393 VKAVRERLRVPFVVDGRQIYVTASLGVVLGPADYERPEELLQNAAIAMNAARSAGCGR-V 451 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGG 531 + + + + + L +R L + + +L+ QPI + G + ++ + DG Sbjct: 452 RVFDWSMRERAERVMDLETNLREGLVRDEFVLHYQPILDLATRRLRGVEALVRWRRVDGE 511 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKN 588 ++ P +F+P Q L VL + LA +VNL Q + Sbjct: 512 LVPPGEFIPAAEQSGLIIPLGAVVLTEACRALARWRAGSLGDSPFFMAVNLSARQFTQPD 571 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + +++ +R ++P + LEITE + ES+M + L + G I IDDFGTGY++ Sbjct: 572 LVKQVVTALRREAMAPADLKLEITESVLMEHPESAMLKLRGLRELGVSIGIDDFGTGYSS 631 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+R D +K+D FV + + +IVRS+ LA VVAE +ET Q L Sbjct: 632 LSYLQRFPIDTLKVDRAFVSGMEE-QGNRVIVRSVVSLAHNLGYDVVAEGIETAAQLDDL 690 Query: 709 HKLGVQYLQGYLIGRPQ 725 +LG QG+L RP Sbjct: 691 SRLGCDMGQGFLFARPM 707 >UniRef50_C6HXD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXD1_9BACT Length = 855 Score = 607 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 107/654 (16%), Positives = 210/654 (32%), Gaps = 34/654 (5%) Query: 104 LRWQLGTRWRYGLTSRYVWQRLF----WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGD 159 W++ L + + + + + Sbjct: 173 GAWRIVNPAGLALFGLSGRTDWIGKTERELARMNPPLAAAHLGCLTTDEEAWVRGSSTDA 232 Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 + + + L + I + +V R R + Sbjct: 233 TEPVVAPDGAIHLIESRKIPLFNEDGSRKSLVVIGRDVTERIRSEEVLR----RYRHIFE 288 Query: 220 LAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVST 271 A +LL+ ++ GY + + ++ ++ Sbjct: 289 NAKEGILLMDESRKIVDVNPAFTATTGYTRDEAIGRNPNMLHSGRQDLRFYESMWASIDR 348 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + Y + + + + + + R A D Sbjct: 349 DGFWEGEIWNRRKSGEAYCEWLGVTAIKKEERISGYIGIFSDITKRKEAEDRIVHMAFHD 408 Query: 330 PLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 LT LPN RA + E + + L +D + ++ G + + Sbjct: 409 ALTGLPNRRAFRERIGEVLERRSREPDLRFAVGILDLDGFKEVNDRMGHSAGDELLVLVS 468 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAA 440 + ++ L +L G E L+L GP+ E + S +++ Sbjct: 469 LRIKESLRSTGTLSRLGGDEFGLLLVGPDLEDVTFDRIVSALSEPFEIGGERVEISGSLG 528 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 ++ + PLL + +E + + + N + AL Sbjct: 529 VTFSPPDRGDVDPLLSHADLALYRVKTREGN-GWTPFQEEMEEALENRHRIKNELVRALS 587 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + +L+L+ QP + G + ++ G++ P+ F+ + + +L + V+E Sbjct: 588 EKELVLHYQPQVDMVSGAVTGVEALVRWNHPKRGLLFPESFINVAEKSDLISSLGRSVME 647 Query: 558 SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY---HISPQAVILEITEE 614 L R SVN+ L N + R+ I P + +E+TE Sbjct: 648 EALAQQERWKTGGLDLRVSVNIGARHFLSDNFLADLDAALSRHCRKGICPVTLEIEVTET 707 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 +A + + I++ + G +++DDFGTG A+ L+RL IKID FV I + Sbjct: 708 EALKDLSKAQKIIKRCLETGIVVSLDDFGTGQASLTSLQRLSVGEIKIDKGFVGKIQDSD 767 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D IV S+ + + + VVAE +ET+ LL +G + QGY I +P P Sbjct: 768 KDRAIVSSLVVVGRMMGIDVVAEGIETEADGLLLIGMGCRVAQGYAIAKPMPAE 821 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 27/127 (21%), Gaps = 11/127 (8%) Query: 211 EKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 E L V L+ + F+ GY T + FL + Sbjct: 27 ETYLKALLDNVLAGVFLVTPNRGIRDVNRRGLFLFGYEAEELVGQSTRLLYPDEKEFLQV 86 Query: 266 ----TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNR 320 A + F++ + + + V L Sbjct: 87 QNLYAKASGDTPTSLEDVPFVRKNGERIWADLSASRVRVGEEDLFVVTVLDVTERHHLQD 146 Query: 321 RWHLQAL 327 AL Sbjct: 147 E-KQLAL 152 >UniRef50_Q2RNE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodospirillaceae RepID=Q2RNE1_RHORT Length = 951 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 114/608 (18%), Positives = 210/608 (34%), Gaps = 27/608 (4%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 G T L+L +F + R I + A Sbjct: 331 ALIGAGPRELTGRRRDGTTFALELALSEVRTEGRRIFIAVIRDITQRKETEGALAATRAR 390 Query: 207 SLGKEKRAFTLS---WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY--- 260 L L A VL L + ++ + + Sbjct: 391 LQTIADNVPGLVFQRELTAEGVLRFLFVSNGVHEVLGITPEALLADGELFLGAMDPDVRA 450 Query: 261 -PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL--YMVRIYHRSEW 317 L + S L + + E L ++ + + Sbjct: 451 AFRETLRQSASRLEPMEEDIKLRGRDGEERWLRGWSRPSRREDGSVVWDGVTLDVTDRKR 510 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGL 369 + A DPLT L N ++ + + +D ++ G Sbjct: 511 AEDKLTFLAYYDPLTGLGNRSLFIDRFDRARRFAESIQAWVAVLSIGLDRFGMVNATIGH 570 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QI 426 M + ++ R L ++ + + G L++L+G L+ +V + I Sbjct: 571 TMGDKVLIAVTRRLQQSLEAGSIVCRAGGDRFLVLLTGLTDRADLREVVATIQDAFVPPI 630 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 D+G + + L+ ++ A + + Sbjct: 631 EVEGQQFDIGLTIGGALHPEDGREAETLIMHADAALHRAK--GGGGAFQMFTPEMGARAA 688 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIA 543 + + + +R L++ + + Y QP + G + + + G++ P KF+ + Sbjct: 689 HLLTIQHKLRRGLERHEFVAYFQPQVDLRSGLITGCEALARWNSPEDGLVPPGKFIGVAE 748 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKN-IAGRIIRLFKRYH 601 ++ L QVL+ +WL+T +VN+ + + + ++ Sbjct: 749 EYGLIDAICGQVLDDSCRWLSTWRARGLPQVPVAVNISGRQFQNARQLVAMVDQALRQSG 808 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + LE+TE A S+ E+++ + L + G AIDDFGTGY++ LKR +K Sbjct: 809 VDPRLLELELTESSAMSDPENAIAVVNLLRERGVSCAIDDFGTGYSSLSVLKRFPIGKLK 868 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV D+ T+ DA IV++I +A A +L VVAE VET A L ++ +QG+L Sbjct: 869 IDRSFVMDVTTDPNDAAIVQAIIAMAHALNLRVVAEGVETLDHLAFLREVHCDAVQGFLF 928 Query: 722 GRPQPLAD 729 RP P D Sbjct: 929 ARPLPGED 936 Score = 58.8 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 16/225 (7%), Positives = 55/225 (24%), Gaps = 7/225 (3%) Query: 102 AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC-----SMYLVGSFFDFPLKISTF 156 L + + + + + + L L S + F Sbjct: 157 GSLSYPFLSSGVHAVLGYHPAEMSVALDGCLNAIHWADRESYLRRLRQSAQTLAICSEEF 216 Query: 157 FG-DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAF 215 + + S A+ ++L+ + + A++ + + Sbjct: 217 RAITREGAVKWLSGASQPRAMANGDILWDGVLVDVTERKRAELWLEMIMDRAADGIVTIN 276 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + + + + + + G V + T + + Sbjct: 277 EQGVIESANAAVGTFFGYADRGELIGRRVEILMAEADRRQHTRHMLRYRETGDGALIGAG 336 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVC-LLYMVRIYHRSEWLN 319 + T ++L L+ + + + ++R + + Sbjct: 337 PRELTGRRRDGTTFALELALSEVRTEGRRIFIAVIRDITQRKETE 381 >UniRef50_A2SIL3 Signal transduction protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SIL3_METPP Length = 965 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 108/674 (16%), Positives = 216/674 (32%), Gaps = 21/674 (3%) Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 + + + LG F L + + + Sbjct: 6 AALTLVAASPTPPGPEYALREVLDRLGPSVFAGLLDADGVLRYANQAALQAIGATPEQVL 65 Query: 125 LFWLGLVT---PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 + + S F + + + + Sbjct: 66 GLRFETTPWWQGCKLSQRRLQQALASASRGEASRFDVRLAIRGDTLAMDFSLLPLYGPDG 125 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 +L + R+ E+ L + + G Sbjct: 126 RVAWLIPSAHDVSERERARRQLRLTRHAVEQAHDALFLVGPDG---AYRDANAAACRLLG 182 Query: 242 YLVPVFFII--FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + + + + + N E + ++++ Sbjct: 183 LTRKQLLRLRVHDIDTQVNETSWPQRWHEMCERGSSRFETNVRHHDGHEIPVDVSVSLVT 242 Query: 300 SFSVCLLYM-VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKSFCC 354 S ++ V RR D LT LPN + L + + A + Sbjct: 243 SDGETFAHVCVDDLRDRRAAERRIQQLLQFDELTGLPNRQRLFEHLGATLQTSATTAVLV 302 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS--GPETEG 412 L +D + ++ G + +R + + ++ + + + G E ++V+ Sbjct: 303 LELDRFKRINDGLGPQIGDAVLREVAGRIAATVRSVDLVARRGGDEFVIVMPAPSVPAPH 362 Query: 413 RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 Q ++ + +R + + + G + + LL + + EQ+ Sbjct: 363 VAQTLLETI-ARPMTIEGHEIHLTCGIGIAMAPADGDRADTLLRRANAALEQAKRLGRNQ 421 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 ++ +Q+ L +R AL L+ QP + G + +L Sbjct: 422 -VNVYAGAPHDDDPEQMALETALRHALRDEQFELHYQPQVDLAQGRIVGVEALLRWQHPT 480 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKN 588 G ++PD+F+P+ + L VL ++ A R +VNL LLQ + Sbjct: 481 LGRISPDRFIPIAEETGLIVPIGDWVLRHAIEQAAAWQRARLPPLRMAVNLSARQLLQPD 540 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +A RI L + P+ +E+TE N + ++ ++ L G +++DDFGTGY++ Sbjct: 541 LARRIEGLLAATGLDPRRFGVEVTESMLIGNFDQAVQHLRALRALGVEVSLDDFGTGYSS 600 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+RL D++KID V D+ D I R+I +A + V+AE VE++ Q ALL Sbjct: 601 LSYLRRLPVDVVKIDRSLVPDVTAPAEDVSITRAIITMAHQLQMKVLAEGVESEGQAALL 660 Query: 709 HKLGVQYLQGYLIG 722 +QG+ Sbjct: 661 AANQCDQMQGWWFS 674 >UniRef50_Q0KC83 Predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains n=3 Tax=cellular organisms RepID=Q0KC83_RALEH Length = 1124 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 121/764 (15%), Positives = 226/764 (29%), Gaps = 57/764 (7%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILF--IFGWRGVVPVLCGMFCTNLW 77 + ++ IS + ++ + + V+L L + R + +L Sbjct: 338 WVIAFAADAKAISGPQRYLPGLVVISGLIISVLLGWLAYALSSSRARAVAVADQMTHSLR 397 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 + + + + + + I + GL + + Sbjct: 398 DSQAALAEAQQIAHLGDWRIDLDQDIAHFSQEMARLLGLRGDKPTPEALFQAIDAGHRAV 457 Query: 138 CS-MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 P + + + L+ + + I A Sbjct: 458 LRERMRTALQDRQPFEFECPYRSRRGRRGWLHLIGHAHGAPDSAV-LRGTAQDISQRRSA 516 Query: 197 QILWRRDIA----------PSLGKEKRAFTLSWLA-------------------ALSVLL 227 + ++ E TL + + Sbjct: 517 EQARTQEHQIALHLATATSEIEVLEGIVHTLLEGMDWEAGAFWPGDDSQGLKLPPVYLAR 576 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTL-GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + P+ + AG W + + +G Sbjct: 577 VKTLQPWLAERPAGPAGAAVLPAPQWYASRSAMARHPQARWLDAGGIRTVFAFPLSRGHV 636 Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHR-------SEWLNRRWHLQALTDPLTLLPNFRA 339 + + S L M A D LT LPN Sbjct: 637 SLGVVELYSRSKRSPDTHALAMASGIANQTGHFLLRRQAEENLRFIANHDALTGLPNRLM 696 Query: 340 LEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + EQ ++ + +D + ++ G +R + L ++E E Sbjct: 697 FKAEFEQALTRARASGQALHVIFVDLDEFKVVNDTIGHNAGDIVLREMADRLRGSLEEVE 756 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--Q-IHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +++L L + + + N + L M F + Sbjct: 757 LITRFGGDEFVVLLDPKGDSTILDRTIARIQAALAPGFVVNESELRMTASIGISSFPEDG 816 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 Q LL + +S +++ + + + AL+Q + +LY Sbjct: 817 SDWQTLLKHADLAMYGAKQLGKN-GYQFYCRGMSASLQRRIDMESHLHRALEQDEFILYY 875 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + ++ + G++ P F+P Q L + A Sbjct: 876 QPRIALASGACTAVEALIRWRHPELGLVMPGDFIPFAEQSGAIVEIGAWALREACRQNAA 935 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R SVNL K++ II ++ + + LE+TE +AE + Sbjct: 936 WRAQGLPPVRVSVNLSARQFADKSLRLTIIDALRQAGLPGNLLELELTESMVMRDAEQAS 995 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L + G R+AIDDFGTGY++ L R D +KIDG FV+ I + D I ++ Sbjct: 996 SWLSRLKRTGVRLAIDDFGTGYSSLAYLSRFPIDTVKIDGSFVRYIPESRSDTQITSAVI 1055 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L L VVAE VE + Q L + G +QGY P P A Sbjct: 1056 GLGHRLGLEVVAEGVENEVQLEFLRREGCDEVQGYYFSHPLPPA 1099 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/274 (8%), Positives = 57/274 (20%), Gaps = 16/274 (5%) Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 F V + ++ + L ++ L Sbjct: 268 FAQAAVPLSAANLLYDSVTGLAARERSRVAGGSTVHASAAHGATALADAQAAPGQHDLAK 327 Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 V ++ ++ + + IS + L S + Sbjct: 328 SVVRNFGGRRWVIAFAADAKAISGPQRYLPGLVVISGLIISVLLGWLAYALSSSRARAVA 387 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 + R +Q + + R +A S + L Sbjct: 388 VADQMTHSLRD------SQAALAEAQQIAHLGDWRIDLDQDIAHFSQEMARLLG------ 435 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + G + + G + A+ + + L I Sbjct: 436 LRGDKPTPEALFQAIDAGHRAVLRERMRTALQDRQPFEFECPYRSRRGRRGWLHLIGHAH 495 Query: 299 ISFSVCLL-YMVRIYHRSEWLNR---RWHLQALT 328 + +L + + + + H AL Sbjct: 496 GAPDSAVLRGTAQDISQRRSAEQARTQEHQIALH 529 >UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinococcus radiodurans RepID=Q9RX49_DEIRA Length = 805 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 121/731 (16%), Positives = 217/731 (29%), Gaps = 71/731 (9%) Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 WR + G + Q + S +VL + G + Sbjct: 52 WRVRAALDRG----RDAAQATGWAQHLLDKLSLPVLVLDRQGTVIHASEACGALGWSHDL 107 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + L L ++ S L + L + SL Sbjct: 108 RGRPLAELLSSPLEDLRLSNLLKRVWQGERLHQVPLSLRHTEGRLQLAEASLLPLHAASG 167 Query: 181 MLFYYLTRM---IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEN- 236 M H R + A + LA L Sbjct: 168 ESTAAYVAMSITTTELHGQSDDNARTDRQYFYESLLAALPASLAVLGPDQRYRFCNPAAI 227 Query: 237 ------DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS 290 ++I G+ + ++ A + + + L+ Sbjct: 228 GNPQIREWIMGHTDAEYVAERGFPPELATERGRHMDEAARERKTVQFEERMLRPDGEPVY 287 Query: 291 LAFILAVLISFSVC---LLYMVRIYHRSEWLNR-------------------------RW 322 L + L + Sbjct: 288 QLRNYTPLFDENGELLLYLGHGVDVTELRRTQEALRELNAQLEERVEARTAELEALSRQL 347 Query: 323 HLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMRV 373 AL D LT LPN Q + L +D + ++ G Sbjct: 348 QHDALHDSLTGLPNRALFSDRLSQAIARSKLPGGPQYAVLFLDVDRFKGINDTLGHPTGD 407 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNN 430 + + R L ++ + + +L G E ++L ++ + + + R + Sbjct: 408 AMLVEMARRLRACLRATDTVARLGGDEFTILLEPLQSTEQAAQVAARIQDALRRPMQMPA 467 Query: 431 ----------TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + M + ++ +L ++ Sbjct: 468 AGPGGLPGGWHQVTMSASLGIVHSQPDYDSAMAVLRDADIAMYRAKDGGRAK-YRVFTPE 526 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 + + + +R AL +L + QP+ + EG++ ++ + G++ PD Sbjct: 527 MREHILHVNRMEHELRRALAADELRVRYQPVLDLDRGRIEGFEALVRWQHPERGLLGPDD 586 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNIAGRII 594 F P+ + L D VL + L SVN L ++ R+ Sbjct: 587 FTPIAEESGLLPDIDRWVLARACRELVQWQRLYPHDPPLHLSVNFCSQHLAAPDVHERVK 646 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 L +R P + LEITE S N+E+L + G R+ +DDFGTGY++ L+ Sbjct: 647 ELLQRTGFDPGRLNLEITESSLLSQTGDVQRNMERLRQLGVRLHLDDFGTGYSSLSYLQL 706 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D++KID FV+ ++ N +A +VR+I +AK +L VVAE +E +Q A L LG Sbjct: 707 YPIDVLKIDRSFVQGMLDNDSNAELVRTIVAMAKNLNLKVVAEGIEDPRQLAALRGLGCD 766 Query: 715 YLQGYLIGRPQ 725 QG+L Sbjct: 767 AGQGFLFSPAL 777 >UniRef50_B9MQD5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQD5_ANATD Length = 1016 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 98/575 (17%), Positives = 207/575 (36%), Gaps = 39/575 (6%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + + + ++++ L + + + + G L F I Sbjct: 433 QELMNTLDILNKQSEMLMEEKEKYKFLVENVSDCIW--EIDFNEKKIEFYGKLKDQFDID 490 Query: 251 FTLGVGKLRYPFLNLTWAVST-------------LCLLNYNQNFLQGVETEYSLAFILAV 297 + + ++ + + Sbjct: 491 VIKSKNDFSAWLEFFHEDDRATVFKKLQDAILLHEEKVEFESRIRDKHGNWRWISSHVQI 550 Query: 298 L---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------Q 346 L ++ + + + R A D LT LPN + E E + Sbjct: 551 LYNEEDKPEKIIAVNIDWTAKKEYEHRIEYIAYYDALTNLPNRKLFEDRLESLIKKAEDE 610 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE---NEKLYQLPGSELLL 403 + + + IDN + ++ YG + ++ + +L + N ++ G E + Sbjct: 611 KTQGAVVLIDIDNFKDINDLYGHEAGDEYLIAVTKKILEYLNSIKLNTFFARVGGDEFAV 670 Query: 404 VLSGPETEGRLQHMVNILN---SRQIHWNNTG--LDMGYGAAWGRFDGNQETLQPLLGQL 458 +L G + + + L +I+ + + + +++ + + Sbjct: 671 ILDGLAKKEEVIEVCTKLLGIFESEIYIQKIEGCIFTSASIGVSFYPDDGRSVKEIFRNV 730 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--- 515 + + + + K++ + +++ A++ LY QP+ N + Sbjct: 731 DMALSSAKENGKND-FQIFMPFMLMKNFKKIEIEKSLKKAIEADQFELYYQPVINLKDME 789 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PR 574 + +L + + GI++P +F+P+ L + V+E L Sbjct: 790 IHSVEALLRWVSPEKGIISPLEFIPVAEDSGLIVKIGEMVIEKAFSDLKNWEKKGISYLH 849 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++N+ L K I + +RY ++PQ + EITE A N + S+ + L + G Sbjct: 850 MAINISARQLKTKFFEKMIQKQIERYGVNPQKISFEITETGAVENFDVSLKILSFLCQLG 909 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 + IDDFGTGY++ L+RL +KID F+ +I + IV I +A L V Sbjct: 910 IKFLIDDFGTGYSSLIYLRRLPIGGVKIDRSFISEIELSKESRAIVEGIILMAHKLDLKV 969 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET+++ +L ++G + QGYL +P P + Sbjct: 970 IAEGVETKRELEILKEIGCDFAQGYLFSKPVPKTE 1004 Score = 54.2 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 14/167 (8%), Positives = 44/167 (26%), Gaps = 12/167 (7%) Query: 164 FTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAAL 223 + L L + +++ + +TR+ + + + L Sbjct: 261 ILLSALYLLIIILFAASVIIFVMTRINRGLERGKQAYEKYAQLLAENANAIVLTLNLKGE 320 Query: 224 SVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWAVSTLCLLN-YNQ 279 ++ + I GY + R NL +S + +LN + Sbjct: 321 -----IIYFNKFAEQITGYKSEEVVGKKWVDIFIPSHRREYIENLFKRISEVKILNDHEN 375 Query: 280 NFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWH 323 + + + ++ + ++ + + + Sbjct: 376 EIVTKNGDTRWILWNNTLIENPYLNEPLIISTGLDITQIKRTQQLLE 422 >UniRef50_A4XFJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFJ6_CALS8 Length = 1015 Score = 606 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 103/575 (17%), Positives = 207/575 (36%), Gaps = 39/575 (6%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL-------LCTPYENDFIAGYL 243 + + +E+R + + + ++ F + Sbjct: 432 QELVNTLEILNKQTELLKEEEERYKFIVENISDCIWEFDVAEKRIEFYGNLKDYFETDKI 491 Query: 244 VP------VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 P + + + + Y ++ + V Sbjct: 492 NPKIDYYAWLELYHPDDIKAVMEKIQRAFE--LRDEKIEYEARIKDKNGNYKWVSVHIKV 549 Query: 298 L---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 L+ + Y + R A D LT LPN + E + Sbjct: 550 FYDNRGKPEKLIGINIDYSAKKEYEDRIKYLAYYDDLTNLPNRKLFENKLSELIKKAAQT 609 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK---LYQLPGSELLL 403 + + IDN + ++ YG + C+R+I + + ++ E ++ G E + Sbjct: 610 GKIGAVILIDIDNFKDINDLYGHEVGDECLRTISQKIAEYLKGLEVQNYFSRVGGDEFAI 669 Query: 404 VLSGPETEGRLQHMV---NILNSRQIHWN--NTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 +L+G E + + + + +I GL + + + +L + Sbjct: 670 ILNGLEKKDFVIEVCTEIQKIFENEIFLEKIERGLYTTISMGISFYPDDGRDTKEILRNV 729 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--- 515 + + + + ++ + +R A++ + +LY QP+ N E Sbjct: 730 DMALSLAKENGKND-FQIFMPFLLLKNLNKIEIEKNLRKAIENDEFVLYYQPVVNLENME 788 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPR 574 + ++ G+++P +F+P+ + L R V+E LK L Sbjct: 789 IHSVEALIRWFLPHKGMVSPLEFIPVAEESGLIVRIGEMVIEKALKDLKDWERKGINDIH 848 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++NL K + +L ++Y + P V EITE A N + S+ + L + G Sbjct: 849 IAINLSARQFKTKYFENTVAKLLEKYSVDPVKVSFEITETGAVENFDVSLKILGFLCQMG 908 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 + IDDFGTGY++ L++L +KID F+ +++ + IV I +A L V Sbjct: 909 IKFLIDDFGTGYSSLIYLRKLPISGVKIDKSFISELMFSKESRAIVEGIILMAHKLGLKV 968 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE +E +Q +L ++G + QGYL +P P + Sbjct: 969 VAEGIENNKQLEILKEIGCDFGQGYLFSKPVPKEE 1003 >UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73380_SYNY3 Length = 732 Score = 606 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 170/435 (39%), Gaps = 18/435 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEF 362 + + QAL D LT L N L Q E + + + +D+ + Sbjct: 290 IKLRKASQNQLSYQALHDTLTGLANRALLLQRLEFAGHQIKNNPKSRFALLFIDLDHFKL 349 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ +G + + I L ++E + +L G E ++ L + + + Sbjct: 350 INDSWGHSVGDALLIKIAEKLQINLRETDLAVRLGGDEFVIFLESITEIKQAIDVAERIL 409 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + L + + + L+ Q+ + + Sbjct: 410 IHLRLPVQIQAKELFVKASIGIVIGSIHYYEPERLIRDADIAMYQAKNNGRNQ-YAVFDP 468 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPD 536 + +++ L + R AL+Q L LY QPI + +G++ ++ + G + P+ Sbjct: 469 SMHQTILERLSLEHDFRKALEQETLELYYQPIISLVNDRLQGFEALIRWQHPEKGYINPE 528 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLLQKNIAGRII 594 + + + + L +++ + +A S+NL P + + I Sbjct: 529 QLIAIAEETGLIIILGQWIMQQACQQIAQWREITNDDKIYVSINLSPNQICRPLFVEEIE 588 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + A++LEITE + E ++++ G +I+IDDFGTGY++ L R Sbjct: 589 NILQTTKLDGDALVLEITEGVLIQHLEIVAECLKKIKSHGIKISIDDFGTGYSSLSYLYR 648 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L + +KID F+ I ++ IV++I L + VAE VET Q LL K+G Sbjct: 649 LPVNYLKIDRSFINQITEDSPSQSIVKTIITLGDLLDIQTVAEGVETNDQLNLLKKMGCG 708 Query: 715 YLQGYLIGRPQPLAD 729 QGY P + + Sbjct: 709 LGQGYFWSEPMTVRE 723 >UniRef50_Q48MD9 Sensory box protein/response regulator n=5 Tax=Pseudomonas syringae group RepID=Q48MD9_PSE14 Length = 705 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 94/555 (16%), Positives = 204/555 (36%), Gaps = 26/555 (4%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPVFFIIFT- 252 + +R T+ + ++ + L+ + GY Sbjct: 139 LEDQLQQRTIDLERFRTVMDASEDAIFLINRNTMSLIEFNRRACQLLGYTAEELAHKTPA 198 Query: 253 LGVGKLRYPFLNLTWAV--STLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMV 309 + + + + ++ +V Sbjct: 199 ELGETSMENLEVVYDQIIAGKGPSEPLETQIRDKSGRDVEVEIHRQAYRTGEDWVIVGIV 258 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLE 361 R R + ++R D LT LPN + + + + +D + Sbjct: 259 RDITRRKESDQRLLTMTHYDALTGLPNRDLFFTSLQMGVTQAAISRWKLAALTVNLDGFK 318 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ +G ++ + + R L + ++ L ++ G + L+L + + + ++ + Sbjct: 319 NINETWGHVLGDEVLLEVSRRLSECLNASDTLGRVDGDQFALILMLRDGQADTRQTLDRI 378 Query: 422 ---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + M + + E + L+ + Sbjct: 379 RNALRVPFQLEGQSIVMTASIGIALYPEDGEDSRELIKHAYTAMNSAKKIGPD-TYRFYT 437 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 ++ + ++ L +R A+ + + QP + G + +L + ++P Sbjct: 438 AQMNADVSARLDLEAALRDAVQKQAFEIVYQPKLNLTDNRVCGLEALLRWPRPGQSGISP 497 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRII 594 F+P++ L V++S+ +A G + +VN+ + ++ I Sbjct: 498 AVFVPVLESLGLIGEVGNWVVDSVCAQIARWQRSGLGSFQVAVNISGQQIYSSSLVADIR 557 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + +++ ++PQ + +E+TE N ++ + L G I+IDDFGTGY++ L+R Sbjct: 558 QALEKHKVAPQWLEVELTESSLMENTSHTIATLGALRANGVSISIDDFGTGYSSLAYLRR 617 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D +KID F++++ +N DA I R+I +LA + L V+AE VET +Q A L + Sbjct: 618 FPIDKLKIDIAFIREVTSNPQDAAIARAIIELAHSLDLKVIAEGVETPEQLAFLRENHCD 677 Query: 715 YLQGYLIGRPQPLAD 729 +QGYLI +P PL + Sbjct: 678 QIQGYLISKPLPLGE 692 >UniRef50_Q1GVY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphingopyxis alaskensis RepID=Q1GVY5_SPHAL Length = 878 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 116/743 (15%), Positives = 246/743 (33%), Gaps = 39/743 (5%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVML---SILFIFGWRGVVPVLCGMFCT 74 F ++ + + + + +F + S+ + + Sbjct: 27 FVAQLLRVATLWHYVLIGRLLAFAVFSVLPGVAGFFDQPSLWLTMASGLMCDAALTVMGQ 86 Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFW---LGLV 131 + + A + + ++ + + L+ Sbjct: 87 AMRRPRPALAARARQVAMLSAALVALGTLFNAAAMFAAIAMPDGGRHFDAFTAIQIGSLL 146 Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 + + F + G A F + + L +++ + R Sbjct: 147 VAASAVSIVRPLFFSFSGAVAFGGALGVASWPFALAGAVFLALLIVMMREDVRHQRRATA 206 Query: 192 SPHFAQILWRRDIAPSLGKEKRAF-TLSWLAALSVLLLL------LCTPYENDFIAGYLV 244 + A +R + E+ L+ + + I Sbjct: 207 AARRAISEQQRALNLMRDFERAGRGWFWETDRDGQLVYISPTVAARLGRPLAELIGRPFT 266 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + + L +++S+ E + + + Sbjct: 267 DIIRKRIGNDESEE----RTLGFSLSSRTPFKELTVQAAAPGEERWWSISGHPISNALGH 322 Query: 305 L---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFC 353 + R + A D LT L N R + E+ + Sbjct: 323 FQGFRGSGTDLTDQKRSEREINQLARYDTLTGLANRRHITDLLERALRTHIGQPQPCALL 382 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + ++ + L ++ + ++ +L G E +VL + Sbjct: 383 LMDLDRFKAVNDTLGHPVGDQLLQQVAGRLTQIVGDKGQVGRLGGDEFQIVLPQLNHPEK 442 Query: 414 LQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + N + ++ + +G DG + L+ + Sbjct: 443 IAGIANAIILSLAKPFAIEGEQVRIGSSIGIAVSDGEGVSASALVRNADLALYAAKDAGR 502 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 + + Q +++ + + +R AL + +L L QPI + G++ ++ Sbjct: 503 G-VYRFYADAMHNQASERKAIEDALRDALAKDELRLLYQPIVDVATERISGFEALIRWNH 561 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G ++P+KF+P+ + NL ++ + +AT G R +VN+ P + Sbjct: 562 ATAGTISPEKFIPIAEESNLIVPIGEWIIRTACAAIATL---GSGYRVAVNVSPRQFANE 618 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I+ I P+ + LEITE + ++ +L + G R+A+DDFGTGY+ Sbjct: 619 ALPATILSAVSGAGIRPEQLELEITEGVFLDESAENLAMFRKLKRTGVRLALDDFGTGYS 678 Query: 648 NYERLKRLQADIIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 LK+ D IKID FV ++++A I+ SI LA A + AE VET A Sbjct: 679 ALGYLKKAPFDKIKIDQSFVLGAADKSSMNAAIIASIVGLASALDMETTAEGVETHDDLA 738 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L+ LG ++QGY+ G+P LA+ Sbjct: 739 LVRSLGCSHVQGYIYGQPMQLAE 761 >UniRef50_C7RC12 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RC12_KANKD Length = 629 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 94/558 (16%), Positives = 197/558 (35%), Gaps = 22/558 (3%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKR-AFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF- 247 + + + I + + + + T + + + Sbjct: 64 LTELEEVKSELEQSIRKLRVTMDAGYDGIVQVNSDGIPTAYNDTVLKMLNLTARELQSLS 123 Query: 248 ---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 K +N + N + L + Sbjct: 124 YRKICQHLFKNIKNPEVVINQLRKALMKQDDSGNILVEHNDGRFFECKAKALELDGQTQG 183 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLR 356 L++ ++ + R A D LT LPN + E + L Sbjct: 184 LVWTIKDITDLKLKEREARYLAYHDELTNLPNRTLFFERLEHALDLAKRKEELLAVIFLD 243 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ +G ++ + + +L ++E++ +L G E +++L E + + Sbjct: 244 LDEFKTVNDTFGHAQGDLLLQKVAKRILVALREHDTFARLGGDEFVIMLEDVEDREAIVN 303 Query: 417 MVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +++ + I + + + + + Q LL + S H Sbjct: 304 VLDRVKHALDTPITLGTNQVYITPSLGVAIYPEDGDDAQDLLKKADMAMYNSKKHGKN-T 362 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + +T ++ + +R AL + L QP +K G + ++ + Sbjct: 363 YSFYSNHLEQYSTYRLSMRTALRRALRNSEFFLEYQPKFSLSDKRMMGVEALIRWNNKE- 421 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNI 589 +M+P++FL + V+E + +A K S+N+ P + Sbjct: 422 TLMSPNEFLNEAESNGMIIPISQWVIEQACRDIAHWKGDSKACCPVSINISPRYFQHGCL 481 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + R+ I + +EITE+ + E+++ + +L+ G +I+IDDFGTGY+++ Sbjct: 482 VDDLKACVNRFKIDASCIEIEITEQAFIPDIENAIKRMHELNDIGVKISIDDFGTGYSSF 541 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L +L +KID F++ + + + +V I +A LSVVAE VE + LL Sbjct: 542 NYLMKLPVQQLKIDTSFIRSLEESEIQHSLVAEIIKIAHLFGLSVVAEGVEHEHIADLLM 601 Query: 710 KLGVQYLQGYLIGRPQPL 727 QG+ +G P P Sbjct: 602 SYDCDLAQGFWLGSPIPA 619 >UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=Bacteria RepID=B4SHZ4_STRM5 Length = 710 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 148/726 (20%), Positives = 259/726 (35%), Gaps = 67/726 (9%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSIL--------FIFGWRGVVPVLCGMFCTNLWN 78 L +P + S + + + ++ + WR G+ ++ Sbjct: 2 LVGTYNPWLVAISLLVAVMASYTALAMAGRTVTAPGKGAAWWWRLGGGFAMGLGIWSMHF 61 Query: 79 FHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKC 138 + + LG + L + A+ RL L+ GI Sbjct: 62 IGMLAFDLPIPLGYDLPITLLSLALAIASSVFALWLVSLRTLPHPRLAGGALLMGTGIAG 121 Query: 139 SMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI 198 Y+ + I G L SL AV Y R+ Sbjct: 122 MHYVGMAAMRMQPGIDYDPG--------WLLFSLMVAVAASWTALYVAFRLRAQRTR--- 170 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 + A + LL L +A P I L Sbjct: 171 ------------------VGDRLAAAGLLGLAIVGMHYTGMAAARFPEGSICGAAVGDGL 212 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWL 318 + +L + V T+ +L + +L + L + Sbjct: 213 QSEWLAMLVVVLTVAILAVVLVV-----SWLDQRVEAQLLRLRNSLLSTSLTD------A 261 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + AL DPLT LPN L++ + + + + +D + ++ YG Sbjct: 262 QQELTQAALHDPLTRLPNRLLLQRRIVQALAEAEQGGSRFAVMFMDLDGFKQVNDAYGHQ 321 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR----QI 426 + ++ L++ N+ L +L G E +LV+ E + L + + + Sbjct: 322 AGDALLVAVAERTRQLLRPNDMLARLGGDEFVLVVR-IEHDEDLPTLARRILQAVGSGPL 380 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + L + + + + L+ Q+ A + ++ Sbjct: 381 -LADNELQVTASIGVAICPDHAASERQLMAFADAAMYQAKESGRN-AFVLFADWMNDSAE 438 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 +Q LL +R A+ L L QP ++ G + ++ + G++ PD+F+ L Sbjct: 439 QQFRLLADLRRAIGSEQLFLNYQPKIRVATQKVAGAEALIRWRHPEHGLIPPDRFIRLAE 498 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L+ L SVNL P+ ++ + + +RY+I Sbjct: 499 RSGAINDIGRWALDQACLQLRRWHDAGHEGWSMSVNLSPVQFSSPHLLQDVREVIERYNI 558 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 +P+ ++LEITE + ++S+ ++ L G I+IDDFGTGY++ LKRL A IKI Sbjct: 559 APRHLVLEITESTVMRDTDTSLRLLQALSALGVGISIDDFGTGYSSLLYLKRLPATEIKI 618 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+D+ + D +IV +I L A + +VAE VET Q+A L +LG YLQGYL+G Sbjct: 619 DHAFVRDLEHSAEDVVIVSAIVALGHALDMDIVAEGVETAAQRAYLERLGCDYLQGYLLG 678 Query: 723 RPQPLA 728 RP A Sbjct: 679 RPVDAA 684 Score = 85.0 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 83/297 (27%), Gaps = 15/297 (5%) Query: 3 VEHNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL--FIF 59 + + I+++ F + + + + S + +A + L L Sbjct: 46 LGGGFAMGLGIWSMHFIGMLAFDLPIPLGYDLPITLLSLALAIASSVFALWLVSLRTLPH 105 Query: 60 GWRGVVPVLCGMFCTNLWNFHLSFLQTAVML----GSQTFVVLCACAILRWQLGTRWRYG 115 +L G + ++ ++ + G F ++ A A L +R Sbjct: 106 PRLAGGALLMGTGIAGMHYVGMAAMRMQPGIDYDPGWLLFSLMVAVAASWTALYVAFRLR 165 Query: 116 LTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFP--LKISTFFGDADAIFTVVDLLSLF 173 V RL GL+ + I Y + FP GD + L+ + Sbjct: 166 AQRTRVGDRLAAAGLLG-LAIVGMHYTGMAAARFPEGSICGAAVGDGLQSEWLAMLVVVL 224 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS-----VLLL 228 T ++ +L V ++ ++ + L+ +LL Sbjct: 225 TVAILAVVLVVSWLDQRVEAQLLRLRNSLLSTSLTDAQQELTQAALHDPLTRLPNRLLLQ 284 Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + G + G ++ + + + + + L+ Sbjct: 285 RRIVQALAEAEQGGSRFAVMFMDLDGFKQVNDAYGHQAGDALLVAVAERTRQLLRPN 341 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/366 (9%), Positives = 83/366 (22%), Gaps = 38/366 (10%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQLSRF-ISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 L+ I + + + P ++ S + +A + ++ Sbjct: 108 LAGGALLMGTGIAGMHYVGMAAMRMQPGIDYDPGWLLFSLMVAVAASWTALYVAFRLRAQ 167 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 V L L + + A + + + Sbjct: 168 RTRVGDRLAAAGLLGLAIVGMHYTGMAAARFPEGSIC---------------GAAVGDGL 212 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 + L L +V + I + +V ++ ++ D T +++ Sbjct: 213 QSEWLAMLVVVLTVAILAVVLVVSWLDQRVEAQLLRLRNSLLSTSLTDAQQELTQAALHD 272 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 L R+++ L ++ +A Sbjct: 273 PLTRLPNRLLLQRR-IVQALAEAEQGGSRFAVMFMDLDGFKQVNDAYGHQAGDALLVAVA 331 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + L F+ + L + LQ V + LA + + Sbjct: 332 ERTRQLLRPNDML-ARLGGDEFVLVVRIEHDEDLPTLARRILQAVGSGPLLADNELQVTA 390 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 + + R+ A D A+ QA E Sbjct: 391 SIG--VAICPD---HAASERQL--MAFADA--------AMYQAKESGRNAFVLFAD---- 431 Query: 361 EFMSRH 366 +M+ Sbjct: 432 -WMNDS 436 >UniRef50_Q2RWY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWY3_RHORT Length = 683 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 107/654 (16%), Positives = 213/654 (32%), Gaps = 27/654 (4%) Query: 102 AILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI-GIKCSMYLVGSFFDFPLKISTFFGDA 160 +L + W L + +L ++ A Sbjct: 26 GAGGRRLCGSVVLSAGKILSVDKTLWQALGLSAESLSGLPFLSFLEDPSREVLAARLRLA 85 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 + + L + + + IL + L Sbjct: 86 GPPWDLRTALRVDGRAIPVVLRGDGAADRTTDTPLQVILITLAPQEGEVEPVSQSALFDH 145 Query: 221 AALSVLLLLLCTP--------YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 L V+L D A + L + Sbjct: 146 IPLGVMLSDGLGRIAYANPAFLAEDIAAVRALLGATPQALATGYLHEGLARTLWEDLLCG 205 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE-WLNRRWHLQALTDPL 331 + + + + L + ++ + + + Q D L Sbjct: 206 RVWRNDVDLPTADGQRTHSRLTIIPLRRDDGAVDRLMTVIEPRSPATDSQAWQQVNHDTL 265 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN + + + + +D+ + ++ G ++ + L Sbjct: 266 TGLPNRVLFQDRLLTALASARRRNDQLAVLFVDLDHFKTVNDSLGHSFGDQLLQQVATRL 325 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNN-TGLDMGYGA 439 +++++ L ++ G E + L+G + + N + R + +G Sbjct: 326 SQCLRDSDTLARMGGDEFTIALTGDGHQRDYAMIANRILETLRRPFTLEGGHEVLIGSSI 385 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + E + LL ++ A A E ++ + + L N +R A+ Sbjct: 386 GITLFPNDAEDVDTLLRNADTAMYRAKASGRN-AFQFFTEEMNREIQSHLDLENALRRAV 444 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 DL ++ QP+ + + ++ D G + P +F+P+ + L VL Sbjct: 445 RAMDLTIHYQPVVDSATLAVVSAEALVRWPLADKGFIPPSRFIPVAEELGLIDEIGGWVL 504 Query: 557 ESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + R SVN+ L + A R+ + + + LEITE Sbjct: 505 WNACTQAKVWQAQGAKAFRVSVNVSWRQLRNPDFALRVREALEGTGLGAAFLELEITEGM 564 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + + + L + G +AID+FG+G+++ + L++ I+K+D V D++T+ Sbjct: 565 VLRDPQGIAPALMALSEMGVALAIDNFGSGHSSIKCLRQFPFSILKLDRSCVADVLTSHE 624 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA++V + +A+ L+VVAE VET Q L + +QGYL GRP P D Sbjct: 625 DAVLVETAAIMARRLGLTVVAEGVETHAQLEFLREHYCDLIQGYLFGRPLPPED 678 >UniRef50_B9MF12 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Comamonadaceae RepID=B9MF12_DIAST Length = 630 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 106/543 (19%), Positives = 205/543 (37%), Gaps = 30/543 (5%) Query: 215 FTLSWLAALSVLLL-----LLCTPYENDFIAGY--------LVPVFFIIFTLGVGKLRYP 261 A ++L +L + I+GY + + + Sbjct: 72 RAAMDAAPDGIVLADRQGRILMVNAPMETISGYTNAQLCGQSIDLLVPVHARPEHGQHMQ 131 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 + + + + + + + ++ + L + ++ VR L R Sbjct: 132 RYHQSPSRRPMGMGR-DLWLQRRDGSQVPVDIALGHSSAHGGTVVAFVRDVSDLRRLEAR 190 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGLMMR 372 H QA D LT L N Q EQ + L +D+ + ++ YG Sbjct: 191 MHYQATHDTLTGLLNRWKFGQRLEQAIAEQAAAQSPPFALLLLDLDDFKAINDGYGHAAG 250 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWN 429 ++ + R L + + L +L G E ++L G + + + L Sbjct: 251 DQVLQEVARRLRGALGTGDILARLGGDEFTVLLPGVACATQAECVAARLMQALCVPCRVQ 310 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 L+ G + LL + + + +++ Sbjct: 311 GFELNFGASMGIALCPQDAGDAATLLRYADMAMYHAKHRGRA-NFAFYAPSMGRKMAEKI 369 Query: 490 LLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 L + ++ AL G L L+ QP G + +L G ++P++F+P+ Sbjct: 370 QLHDRLKLALAYGGLTLHYQPQVEVATNRMVGVEALLRWHDPQLGEVSPERFVPVAEATG 429 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 L V+ + + +A R +VNL L Q ++ ++ R + +H+ P+ Sbjct: 430 LILELGAWVMAAACRQIAAWERQGMRLRVAVNLSAQQLRQTDLVEQVARNLRTHHVPPEL 489 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LE+TE +A ++ E + + +L G +A+DDFGTG+++ LKRL IK+D F Sbjct: 490 LELEVTESEALADPEQACQVLNELRALGVAVALDDFGTGHSSLAYLKRLPVSHIKVDREF 549 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 ++++ + D +VR++ LA L VV E VET++Q L ++ QG+L + Sbjct: 550 MRNVPASGGDTTLVRAVVALAHTMGLRVVVEGVETREQLQFLREMQCACYQGWLFAKALS 609 Query: 727 LAD 729 D Sbjct: 610 PDD 612 >UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Sphingomonas RepID=A5VDE7_SPHWW Length = 887 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 115/719 (15%), Positives = 225/719 (31%), Gaps = 38/719 (5%) Query: 41 YIFLAWMPL--CVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSF-LQTAVMLGSQTFVV 97 W+ + + ++ + ++ G + + + Sbjct: 66 VAAGLWLLGRPALGGAGFWMIAAPLLAMLVAGGAIRLVARRGKGATAPERMHGFVALLGL 125 Query: 98 LCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFF 157 + W L + + + LV + V + Sbjct: 126 VQGFGWSVWLLASATGLAPSRWALAAVAHGGLLVVTTLVFA---PVPTAALALWLCLAIA 182 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP---SLGKEKRA 214 V L + + ML R V+ + E+ Sbjct: 183 ATVALGPWAVLALLVPLLAVAVVMLGGISERSYVASRRWLARAAVALKASLLLGEFEESG 242 Query: 215 FTLSWLAALSVLLLLL------CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 W L+ + D + G + ++ G G Sbjct: 243 RGWFWETDDRGLISYISPQIAAALGLAADRLLGTPMTGL-VLHEAGDGAGSGAGERTLGF 301 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQ 325 L + + L Sbjct: 302 HLATRLAFSEIAVRAAGDDVRWWSLSGRPAFDEYGNFLGFRGSGTDLTEMRRSEAEVKRL 361 Query: 326 ALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN + + ++ + L +D + ++ G + +R Sbjct: 362 ASYDSLTGLPNRILMRRTLDESLRDIAGRPKRAALFMLDLDRFKMVNDTLGHPVGDALLR 421 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLD 434 + L ++Q++ ++ +L G E +VL G RL + + + S+ + + Sbjct: 422 QVAVRLQRVVQQDGQVGRLGGDEFNVVLPGIVERNRLATLASAIIQQLSQPYLIDGAHVS 481 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 +G + T L+ + A E + + LL Sbjct: 482 IGASIGIAIAPDDGATADALVRNADLALYAAKADGKG-VHRFYEPEMHASAKDRRLLEMD 540 Query: 495 IRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R + + L L QP+ + ++ ++ G ++P F+P+ + L + Sbjct: 541 LRGVMSESGLHLVYQPVVDAGSEAIVCFEALVRWDHPTRGAVSPSDFIPVAEEIGLIPQI 600 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + A P R +VN+ P+ ++ G ++ + P + LEI Sbjct: 601 GEWVLRTACLEAANWPD---PVRVAVNISPIQFANPSLPGIVLSALAAAQLPPHRLELEI 657 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE ++ ++ +L G R A+DDFGTGY++ LK+ + IKID FV+ Sbjct: 658 TEGVFLNDDAATDAMFARLKAIGVRFALDDFGTGYSSLGYLKKAPFNKIKIDQSFVRGAA 717 Query: 672 T-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A I+R+I LA++ + AE ET + AL+ LG ++QGY+ GRP + Sbjct: 718 VPGNRNAAIIRAIVALAESLEMETTAEGAETPDELALIRSLGCSHIQGYIFGRPMLSDE 776 >UniRef50_Q12T53 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Shewanella RepID=Q12T53_SHEDO Length = 941 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 101/582 (17%), Positives = 201/582 (34%), Gaps = 41/582 (7%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 + +I+ E R L + E +++ + Sbjct: 343 DANRALNSLREKLEIIVSERTVQLKNSENRYRGLVESLQDEYIFYQHDIQGEIQYVSPSI 402 Query: 244 VPVFFIIFTLGVGKLRYPFLN----------LTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + G + + + + + + ++ Sbjct: 403 THILGHKALNFRGSYNKYLTSNKNNLAIPELILRCIKGEHVPPFEIEIMDIKGAYHTFEV 462 Query: 294 ILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--- 347 + + + + + + R+ + + D LT L N + Q Sbjct: 463 LERPMYNEQNECIGCEGIAHDITERKQHQRKLYRLSHFDKLTNLANRYLFTLSLGQAITS 522 Query: 348 -----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + L + + ++ + G ++ L + + L + G + Sbjct: 523 AKALNQTFALLFLDLTRFKIINDNLGHSAGDKLLQQAALRLTEQLNSQDILARFGGDKFC 582 Query: 403 LVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L E + + + + ++ +G F N + LL Q Sbjct: 583 ILLPE-SDEKQAEAVALTLIKILAQPFEVYEQSFILGCRIGISLFPTNGHDPETLLKQAD 641 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ---GD-LLL--YAQ---- 509 + E + +++ L +R AL + + L Q Sbjct: 642 AALYVAKK--RPAGFAFCSEEQAVYNQRRLKLEQGLRLALSKSSFDESFELSAVYQSLNQ 699 Query: 510 -PIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 P + G++ ++ + + G ++P +F+P+ + L +L + + L Sbjct: 700 LP--DAGLAGFEALIRWVHPELGPISPMEFIPIAEETGLIFELSRWMLTKVCRQLKEWHQ 757 Query: 569 DKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R SVNL L L+ N+A II L + P+ + +EITE + E S+ + Sbjct: 758 LGFDFKRVSVNLSALDLININLAEEIINLIEEAGAEPRWLKIEITETALMAAPEQSISTL 817 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +QL G +AIDDFGTGY++ LK L A +KID F+++I+T+ D +V+++ +A Sbjct: 818 QQLVGNGIHVAIDDFGTGYSSLAYLKSLPATSLKIDQSFIRNIMTSIEDQAVVKAVISMA 877 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V AE VETQ+Q L QGYL +P D Sbjct: 878 HSLGKKVTAEGVETQEQLDFLITRHCDLAQGYLFAKPLIAQD 919 >UniRef50_C5SQE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQE4_9CAUL Length = 622 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 95/573 (16%), Positives = 192/573 (33%), Gaps = 35/573 (6%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---------- 233 M A R+ + +R + L Sbjct: 44 RATQLMTDELETANEKLRQSLRDLRENGQRFQATIETLPHGICLYDRDGHICEYNRAYLT 103 Query: 234 ----YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 + + G + + + L ++ + ++ Sbjct: 104 FFDVDKANNARGLSLVQALEAAGRRMSASNARLMQLLEYLAIPKTGHSEGEYVWPSGRTV 163 Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--- 346 ++ L ++ S A D LT L N ++ Sbjct: 164 RVSRTGV----EGGGYLDVIADITESHLARATIERMANFDALTELANRNLFQKRLADLVA 219 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + L +D + ++ YG + + + R L+ +++ + +L G E Sbjct: 220 RASARSMAAILSLDLDRFKAVNDLYGHGVGDALLAKVARRLVDVLRPGDLAARLGGDEFA 279 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L + L S + + +G D L+ Sbjct: 280 VLLEKVSAHHDAHQVAKRLVSHLSAPYEIDGLEIVIGASVGIEFIDDPHAAPIDLMRHAD 339 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEG 516 + + + + ++ + +R A + L QPI + Sbjct: 340 QALYAAKRSGRND-IAVYDAKLHETYLERQQIEADLRKAAQSREFFLVYQPIFCVKSARV 398 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 GY+ +L GI++P++F+P+ + + V+ K A P + Sbjct: 399 CGYEALLRWQSPVRGIVSPNEFIPVAEETGIIEEIGSWVIRKACKDAAALPE---HTTIA 455 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ P+ + + R + I+P + +EITE +A ++ + L G R Sbjct: 456 VNVSPVQFRSRAFVSVVTRALQDSRINPNRLEIEITEGVMIGDAGEALKILRALKALGVR 515 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I++DDFGTGY+++ + D IKID FV+D+ + I+R+++ + + + A Sbjct: 516 ISLDDFGTGYSSFSYISAFPFDKIKIDQSFVRDLGQRSESLAIIRAVSGMCSSLGIVSTA 575 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET+QQ +L +QGYL G+P L + Sbjct: 576 EGVETEQQFEILRTEHCDTMQGYLFGKPVALNE 608 >UniRef50_Q47VW2 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47VW2_COLP3 Length = 831 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 103/563 (18%), Positives = 209/563 (37%), Gaps = 32/563 (5%) Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 Y ++ + ++ ++ L E + + L V L+ + + G + Sbjct: 269 RYSELVLRRRETVLLTYQEMMSLHLEGETKKPQDDIHSWLGVPLIY------SGQLLGVM 322 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 V + T + ++ VS +F + L L Sbjct: 323 VLQSYYYKTTYNQQDAELLNFVSNHVSAAIKRRELADFERRSHELLEQQVKLRTLALEDE 382 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCC 354 + + A D LT LPN + Sbjct: 383 --------ITHRKQAEKLLKHTAAHDSLTGLPNRMVFLDLLNHAIACAKRKDDFSFAVLF 434 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G ++ I R LL ++++ + + +L G E ++++ ++ Sbjct: 435 LDLDRFKVVNDSLGHHAGDVLLKIIARELLAIVRKVDTVARLGGDEFVILIEDLKSNNEA 494 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + +N + G + +L + + Sbjct: 495 FEVAQRITAFLQQPFTIDNQLVYTGTSIGISFSNIRYTDADTMLRDADTAMYHAKDNGRG 554 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 + ++ + + + L IR A+ + + Y QPI N++ +G++ + Sbjct: 555 R-YEVFDDSMHQKVQNALSLEADIREAITWQEFIPYFQPIIKLDNQKLKGFEALARWQST 613 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSVNLMPLTLLQ 586 G + P+ F+PL + +L D+Q++E + L + S NL Sbjct: 614 KRGFVYPNDFIPLAEETDLIKEIDIQIIEKSCQQLKCWHDELGCDDLYVSCNLFSKQFFS 673 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ I ++ KR ++P + +E+TE NAE + N++ L G +I +DDFGTGY Sbjct: 674 TSLPQDIEKVLKRTGLAPHHLRVELTERALLENAEIVLTNMQALKNMGVKILLDDFGTGY 733 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L R D++KID F+ ++ + + I+R+I DLA +S V E +E+ Sbjct: 734 SSLGYLHRFPIDVLKIDRSFISNVDEHNNNRAIIRTIVDLANNLQMSTVGEGIESLADAE 793 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 LL ++ Y QGY +P D Sbjct: 794 LLQQMDCVYGQGYYFAKPMSSQD 816 >UniRef50_A1SWA5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Alteromonadales RepID=A1SWA5_PSYIN Length = 724 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 113/602 (18%), Positives = 206/602 (34%), Gaps = 43/602 (7%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 ++ + + I + L ++ W Sbjct: 105 YVWVLASGKLVERDEQGKPKRMIGTHLDINERKNNEELMIVTSQLLNESQQIGRLGGWKL 164 Query: 222 AL--SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT-----WAVSTLCL 274 L L T I F G+G + A++ Sbjct: 165 DLKTGDLFWTDETYR----IHETSPEEFNPTVDAGIGYFLPDSQKIISKALDEAINNGIG 220 Query: 275 LNYNQNFLQGVETEYSLAFI--LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ------- 325 + + + + +V L + + + R+ Sbjct: 221 YDLELQTYTTKGRKIDVRTTCIVTQEDGVAVRLTGIFQDISEQKANQRKLEKSNLDLANA 280 Query: 326 -------ALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLM 370 A DPLT LPN L + + + +D + ++ +G Sbjct: 281 NSALKLSAHYDPLTGLPNRILLADRIQQAVAKSLRNDKYVAVAFIDLDGFKAVNDSHGHT 340 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 + ++ + + L +++E + L + G E + V+ +V + S + Sbjct: 341 IGDELLKKVAKRLKHVLREGDTLSRFGGDEFVAVIDNLSDPRESDLIVLRMLESVSSTLV 400 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 L + + + + LL + + + Sbjct: 401 VEKKLLKISASIGVTFYPLDSAGPEQLLRHADQAMYMAKQQGKNRSY-VFDIEQDVAIKH 459 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 L I AL + LY QP + G + ++ D G++ P FLP + Sbjct: 460 HNEALKRIAQALKNNEFALYYQPKTDLRSNRVVGVEALIRWNHPDRGVLAPAMFLPAVEH 519 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HIS 603 L V+++ L+ SVN+ PL L + R+ +Y +I+ Sbjct: 520 DILDIEIGKWVIKTALQQSQNWLSSGTDIPISVNISPLHLQHAEFVSELKRMLDQYPNIN 579 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 ++ EI E A + E +++ ++ G R +IDDFGTGY++ LKRL A+ +KID Sbjct: 580 AGSLEFEILESSALKDIELVSKVMKECNQLGVRFSIDDFGTGYSSLTYLKRLPAETLKID 639 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV+D++ +T D I++ I +LAK +L V+AE VET Q LL LG ++QGY I + Sbjct: 640 QSFVRDMLIDTDDKAIIQGIIELAKVFNLKVIAEGVETPQHGELLLSLGCYFVQGYGIAK 699 Query: 724 PQ 725 P Sbjct: 700 PM 701 Score = 51.9 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 8/131 (6%), Positives = 20/131 (15%), Gaps = 16/131 (12%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 R + + + L I GY I + Sbjct: 11 QQDDNNARLELVINATGVGIWDWQVQTGELTFNKRWAEIIGYTFDELQPIQFDSWASNLH 70 Query: 261 PFLNLTWAVSTLCLLNYNQ-------NFLQGVETEYSLAFILAVLI----SFSVCLLYMV 309 P + N + ++ ++ Sbjct: 71 PDDLVKAKSLLAQHFNGEIDFYELEARMKHKSGHYVWVLASGKLVERDEQGKPKRMIGTH 130 Query: 310 RIYHRSEWLNR 320 + + Sbjct: 131 LDINERKNNEE 141 >UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1N8_SHEAM Length = 817 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 120/665 (18%), Positives = 224/665 (33%), Gaps = 49/665 (7%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 L + L + ++ W G I + +++ + Sbjct: 149 LIYLEYDLSGAYSRAISELQQRFLQIWGGGALLILMFLTVFHYVGVRPLRSLLRLARLKQ 208 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 ++ + ++ ++ +R + E+R Sbjct: 209 AEPLAQTVPMASSEVAKLQQYMY-----------QTELKLKRTLKQLRDSEQRWLFAVEG 257 Query: 221 AALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV------ 269 + + + + + GY ++ G+L Sbjct: 258 SQTGIWDWQISSGELFLSDRWKEMLGYGPTELKNEYSSWEGRLHPDDKARVLERLQSYLK 317 Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVL----ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + V+ ++ R + Q Sbjct: 318 GEADVYESRHRLKHRQGHYIWVLDRGMVVEWQEDGRPARVIGSQRDVSEDMRNQQAIAHQ 377 Query: 326 ALTDPLTLLPNFRALEQAP---EQEAGK------SFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT L N RA+ A +Q + + +DN + ++ G + Sbjct: 378 ANHDSLTNLANRRAVMDALFEFQQAGPGSMLRLGALLLIDLDNFKLVNDALGHHHGDRLL 437 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGP-ETEGRLQHMVNIL-------NSRQIHW 428 L N + +L G E +++ + H L +R Sbjct: 438 IQAAARLSGFFSGNALVARLGGDEFAIMVLDLATDTEQAAHQAMQLGAELKQQIARSFQL 497 Query: 429 NNTGLDMGYGAAWGRFDGNQ-ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 ++ +++ FD + LL + + + + T+ Sbjct: 498 SDQQINVTASVGVCLFDNHHPVEPAQLLKHADMAMYAAKDGGRNGC-ALYSDELEDKATE 556 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L N +R A+++ L L QPI + E + + + G ++P +F+P+ Sbjct: 557 NLWLQNELRHAIEREQLSLVFQPIFNHDGELVCCEALCRWHHPERGPISPAQFIPVAEDS 616 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL + + L +VN+ Q + R++ L K + +SP Sbjct: 617 GLIIGIGQWVLLEVCRTLKAMSEKGTPMPAVAVNISARHFNQIDFVERLLALLKAHQVSP 676 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE SN + +++L GF IAIDDFGTGY++ L+ L +K+D Sbjct: 677 AQIELELTEYALLSNLNAISERMQRLRSAGFSIAIDDFGTGYSSLSYLQSLPLSRLKLDA 736 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV I T + IVR+I D+A + L VVAE VET+ QQA L L + QGYL+G+P Sbjct: 737 AFVGRIGTEAGN-AIVRAIVDMAHSLMLKVVAEGVETEAQQAYLSSLECDFFQGYLLGKP 795 Query: 725 QPLAD 729 P ++ Sbjct: 796 MPASE 800 >UniRef50_Q0A9N6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9N6_ALHEH Length = 696 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 104/590 (17%), Positives = 194/590 (32%), Gaps = 26/590 (4%) Query: 163 IFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA 222 V+ + + + A+ R A ++ A SW + Sbjct: 91 PVPVLVNAAPLYGEEGRIAGAVVSFQDVRERQVAREALERREAELAEAQQIAHLGSW-VS 149 Query: 223 LSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST-----LCLLNY 277 V + + + A+ + Sbjct: 150 DFVRNEIRWSDEVYRIFGLTPGEWGGTEAAFMEAVHPEDRARVRQAIDESMRPNGPPYDI 209 Query: 278 NQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + + + V + +V RR + D LT L Sbjct: 210 EHRIQRPDGSVRIVHQKGTVAFDADGRPLRMAGVVHDITEMREAERRLQYLSHHDVLTEL 269 Query: 335 PNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN + Q + + +D ++ G ++ + R L Sbjct: 270 PNRTLFQIRLRQAISEAQAEKGCFALVHIGLDRFRSVNEGVGHHAGDQVLQQVARRLEAC 329 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 ++ E L +L G E ++L+G + + V+ L + + A Sbjct: 330 LRPGETLARLGGDEFAVLLAGAGDDAEVAAGVDRLLAPLQELFRVGEDEFYVPGSAGVAL 389 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + + L+ + ++ L ++ + +V L + +R A+D+ + Sbjct: 390 YPHDCSSPGELMQRAEAAMHRAKQEE-STRLAYYSAEMNQRARARVALESRLRRAVDRME 448 Query: 504 -LLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 L QP G + +L + +G + +P F+P++ Q L ++ Sbjct: 449 GFYLDYQPRVETATGRIIGLEALLRWREGEGPVHSPATFVPVLEQTGLIMELGEWIVGEA 508 Query: 560 LKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + +VNL + G I + P + LE+TE Sbjct: 509 CRQARAWRQAGLPPVQLAVNLAAPQFRDPAMPGIIEGALGEAGLPPGNLELEVTESMLMR 568 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 S + + Q G R+A+DDFGTGY++ L+R D++KID FV D+ + A Sbjct: 569 EVTSVIDTLGQFRDMGVRVAMDDFGTGYSSLAYLRRFPIDVLKIDRSFVNDLYADESGAA 628 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I+R+I LA + VAE VE +Q A L + G +QGYL RP Sbjct: 629 IIRTILSLADNLGMESVAEGVERPEQHAFLCREGCHAVQGYLFSRPASPE 678 Score = 43.8 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 9/129 (6%), Positives = 23/129 (17%), Gaps = 4/129 (3%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + + L+ L + + + L Sbjct: 2 REQLLESLAEGVFSVDAEGNFTFLNRAACRLLGLADEQVALRANHQEWALHSGPDSQPLP 61 Query: 260 YPFLNLTWAVSTLCLLNY-NQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRS 315 + + T C+L F + A L + + + Sbjct: 62 PRSSPIDQVLRTGCVLKGCELRFRHSDGHPVPVLVNAAPLYGEEGRIAGAVVSFQDVRER 121 Query: 316 EWLNRRWHL 324 + Sbjct: 122 QVAREALER 130 >UniRef50_Q15V87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15V87_PSEA6 Length = 1524 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 93/483 (19%), Positives = 186/483 (38%), Gaps = 21/483 (4%) Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-----SFSVCLLYMVRIYHRSEWLNR 320 ++ + E + + + + L ++ + + Sbjct: 1033 LESLEASEDWRGEDQIMLQNEEVRDVLVYIKAVACINDVTDIDSYLIILSDISEHKKAQQ 1092 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMR 372 A D LT LPN L + + + +D + ++ G Sbjct: 1093 ALIKLANFDALTGLPNRALLLDRVDHAIYQAQRSASTLGLFFIDLDKFKQVNDSLGHNAG 1152 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWN 429 ++ I LL L+++ + + +L G E ++++ T L H+ + + + Sbjct: 1153 DTLLQEISARLLNLLRKEDTIARLGGDEFVVLIENVHTIDDLTHLASQIIEIIDTPVQLE 1212 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 N + + + + + Q LL + + ++ +++ Sbjct: 1213 NHLVSVSSSIGIALYPDDAQDAQELLQNADIAMYHAKENGRSH-FQFFTAKMNVLAQQRL 1271 Query: 490 LLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFN 546 L + ++ A L Y QPI + + G++ ++ G ++P +F+P+ + Sbjct: 1272 ALESDLKYAHSHQQLENYYQPIIDISRNKIAGFELLMRWFTDT-GKVSPGRFIPVAEELG 1330 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 L LQ +E L + SVNL +I + + Sbjct: 1331 LIESMTLQAMERALPMFKHWQANGFDGYLSVNLSARHFESLQSIKDVIAFLASNALPVEM 1390 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 V EITE + + ++ ++ L + GF IA+DDFGTGY++ + LK +IK+D F Sbjct: 1391 VRFEITESALMKDYQKAIIYMKHLREAGFSIALDDFGTGYSSLKYLKEFPLSVIKVDKSF 1450 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V DI N + ++ +I +A++ + VAE +ET++Q A + Q+LQG+ RP Sbjct: 1451 VDDIGINKNNEALIETILRMAQSLDMYCVAEGIETKEQVAFFKEHDCQFLQGFYFSRPVA 1510 Query: 727 LAD 729 LAD Sbjct: 1511 LAD 1513 >UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 Tax=Comamonas testosteroni RepID=D0IZ49_COMTE Length = 1115 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 113/621 (18%), Positives = 215/621 (34%), Gaps = 57/621 (9%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-FTLSW 219 + V+L + T L + I + + R +R L Sbjct: 476 EGAPVWVELNAFLTGRHESRR-LQVLVQDISGRKRLEQMERLGHQQLRNLMQRLPVGLVM 534 Query: 220 LAALSVLLL--------------------------------LLCTPYENDFIAGYLVPVF 247 L+ + Sbjct: 535 EDLDGRLVYWNEEFLRLAGHGGKPGVSTQQWWERMFPDAAERERVIQRWEVAKAQARRTL 594 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 + + V ++ + L S + +A + + L Sbjct: 595 QLRQSERVDDVQAQWDELATEASACTVSAQTLMLSGVDGLRRPVAVSAVL---QAEGCLM 651 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDN 359 +++ + + A D LT LPN R L +Q + L IDN Sbjct: 652 VLQDQSQRMAAEQEVRRLAFYDALTGLPNRRLLADRLQQALAVAQRKAHFGGVVLLDIDN 711 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--ETEGRLQHM 417 + + YGL ++S+ + + L+ + + G + +L++ ++ + Sbjct: 712 FKAFNETYGLDQGDLLLQSMSQRIRGLLPSGATIARQGGDDFVLLIEDLGSDSVAAAARL 771 Query: 418 VNIL------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 I + F + T + + + Q+ + Sbjct: 772 EQQADQWLSRLREPIEIGGIPRSITVSMGLSLFGEPELTGEEVQRRAEMAMYQAKSQGRN 831 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-KEGEGYDEILARLKYDG 530 ++ + + ++ L +R L G+ L+ QP + G + +L + Sbjct: 832 VS-CFFDPQLQSALQERRTLEQDMRAGLQAGEFELFYQPQVEMGKVIGAEGLLRWKHPEK 890 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKN 588 G + P F+PL + + VL++ + LA SVN+ P Q Sbjct: 891 GFVPPAHFIPLAEETGVILPLGDWVLQAACQQLAKWAKHPRYAQLVLSVNVSPKQFHQSG 950 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++++ + + + LE+TE S+ + ++ + +L +G ++DDFGTGY++ Sbjct: 951 FVEQVLKALAEHGADARRLKLELTEGMLVSDVDDTIAKMMRLKSYGIGFSLDDFGTGYSS 1010 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL D +KID FV+D++T+ DA I R+I LAK+ SL V+AE VETQ Q L Sbjct: 1011 LSYLKRLPLDQLKIDRSFVRDVLTDPNDAAIARTIVALAKSLSLHVIAEGVETQAQCRFL 1070 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + QGYL+ P P+++ Sbjct: 1071 EGIRCYAWQGYLMSPPVPVSE 1091 >UniRef50_Q2RU51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RU51_RHORT Length = 764 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 112/639 (17%), Positives = 204/639 (31%), Gaps = 35/639 (5%) Query: 112 WRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS 171 L G ++ + + L G D Sbjct: 103 RLNRAVRERRAAFLDVGHFRHRSGKIIAVEVSCNPVADTLAEEGRRGGLLGWLLDGDDAE 162 Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 L+ + F I + ++ + ++ A + Sbjct: 163 GAPGALLSMVTFV----DITARRESEAAVIKLSHAVEQSSA---SIVITDADG---RIEY 212 Query: 232 TPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE 288 I+GY + L ++ + + T Sbjct: 213 ANPAFTKISGYTAQEAIGRRPSILKSGLVPAETYRALWQTITNGGEWRGEFHNRRKDGTL 272 Query: 289 YSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 Y ++ + + + + + + +A D LT LPN + L Sbjct: 273 YWEMASISPIRDARGKITNFVAVKDDVTERKAIESELYHRANYDALTGLPNRQLLLDRVS 332 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + + ID + ++ G ++ L +++ + L +L Sbjct: 333 TALDLARRHDRRVAVMFMDIDRFKQINDSMGHAAGDVLLKQAASRLAAVLRPQDTLGRLG 392 Query: 398 GSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E L+V G E + + L R + + + + T Q L Sbjct: 393 GDEFLVVAPGLRWESEATALASRLLEVARRPFTIDGREVYVSVSIGVSLGPVDGTTAQAL 452 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-- 512 + + A + +++L+ N +RTA+ G L L QPI Sbjct: 453 MRNADAAMYLAKGGGRDAA-HFFTPDIEAAARRRMLIENGLRTAVSDGSLYLALQPIIAC 511 Query: 513 -NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCD 569 + + +L G + P +F+P+ + L V+E + L + P D Sbjct: 512 ADHTMIKAEALLRWTHPQLGGVPPSEFIPIAEESGLIRAIGAWVIEEAARLLVSLDPPRD 571 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 R +N+ + + + RY + P+ + +EITE + + + ++ Sbjct: 572 GA-FRLGINIASSQFT-GGLHHHVAGMLARYDLDPRMLEIEITERMLLDPSPAILEQVDA 629 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G IAIDDFGTGY+ L D +KID FV + ++ +I L Sbjct: 630 LRAMGVSIAIDDFGTGYSALSYLSVFHVDTLKIDRAFVSVMTDEARSQALIGAIVALGHE 689 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +VVAE VET Q LL +L V LQGY +GRP Sbjct: 690 LGCAVVAEGVETADQARLLGELAVDALQGYFLGRPTTAE 728 >UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W8B7_MAGSA Length = 682 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 102/455 (22%), Positives = 181/455 (39%), Gaps = 18/455 (3%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----- 344 L + + V ++ + H A D LT LPN R LE Sbjct: 199 PLVWSSRDELGEVVH--AYNQLLTEIDQRTEDIHQLANRDLLTGLPNRRLLEDRIGHAIA 256 Query: 345 ---EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 Q + IDN + ++ G +R I + +M+ + + + G E Sbjct: 257 LAGRQNRSIALLFADIDNFKVVNDTLGHKQGDALLRIIADRIHDIMRGMDTVARWGGDEF 316 Query: 402 LLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++V+ + G + L + + L +G + + + L+ Sbjct: 317 VIVVESLNSAGEAASVAEKLIETIGVPVQLGSNLLRVGVSVGISMYPQDGADITTLIKNA 376 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKE 515 ++ ++ ++ + +++ + +R A+ Q L L+ QP + Sbjct: 377 DMALFEAKGRGRN-TFHFFDQAMNARALRRMDIEMALRQAIPQNQLELHYQPKIASASGA 435 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPR 574 G + ++ + G++ PD+F+PL + +L VL + + Sbjct: 436 LAGVEALVRWRRPGEGLVQPDEFIPLAEESDLIVAVGEWVLNEACRQIRDWEARGFGEVA 495 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VNL P L + I R+ + + P + +E+TE E + + +L G Sbjct: 496 VAVNLSPRHFLHEKDVDGIFRIVDQSGVRPDLIEVEVTESTFMHEPEKVIGYLNRLRDRG 555 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 F IAIDDFG+GY++ L+RL +KID FV DI N +A I+R+I +A A L + Sbjct: 556 FGIAIDDFGSGYSSLSYLRRLPITTLKIDRAFVMDIEHNADNAEIIRAIIAMANAMGLGL 615 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VE + Q L +QGY RP P AD Sbjct: 616 IAEGVENRHQFEFLRHADCGVVQGYYFSRPLPPAD 650 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 108/568 (19%), Positives = 201/568 (35%), Gaps = 35/568 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYL 243 +++ R +K + +S+++ L + I Sbjct: 320 LIALFDDATERRSLSQELESTKKFLELIVDNIPVSLIVESAGDGRYLLANRSAEIILNRK 379 Query: 244 VPV---FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + R A+ +L L VL Sbjct: 380 REDATGLTTADIFNPREARLIMARDEAAIKKRGVLTEEHPISTKDGLRLFLTRRATVLGD 439 Query: 301 --FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 L+ R A D LT LPN A QA Q Sbjct: 440 GGEPQYLIKTYEDVTDRRQTESRMAHMAYHDGLTDLPNRAAFLQALSQMIEACADTGEEF 499 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + + L+ ++ +G + + + R + + + + +L G E L++ G + Sbjct: 500 AVLNVDLKGLKDVNDVFGHAIGDKLLIEVARRVHTVAR-GGVVARLSGDEFGLIIDG-KQ 557 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + L + + + F N LL ++ A Sbjct: 558 PETGRALAEQLAAAIAVEFQIEGKSIRTALTTGISVFPHNGPDPASLLANAGAALFRAKA 617 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI------RN-KEGEGYD 520 ++ E + Q + +L + A+ G+L LY QP + E G++ Sbjct: 618 RSRG-SITFYEPEMDQQIRDRRVLHQELSVAIKNGELSLYFQPQASSGRTVDCSEIIGFE 676 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 + G + P F+PL + + +L + A+ P + +VNL Sbjct: 677 ALARWHHPVRGFVPPSDFIPLAEESGMIVEMGEWILREACREAASWPK---PLQVAVNLS 733 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P + ++ + + +SP + LEITE + + + + +L G R+++D Sbjct: 734 PAQFVHGDLVALVHSILLETGLSPGRLELEITEGVLIEDFDRGVALLRRLKALGVRVSMD 793 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFG+GY++ L+ D IKID FV ++ N A I+R++ L ++S+VAE VE Sbjct: 794 DFGSGYSSLSYLQAFPFDKIKIDRAFVMNLGRNPQSAAIIRAVIGLGHGMNMSIVAEGVE 853 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T +Q L + G +QGYL+G+P P+ Sbjct: 854 TPEQLGFLAEQGCDSVQGYLLGKPLPID 881 >UniRef50_B5ZH00 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZH00_GLUDA Length = 698 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 120/685 (17%), Positives = 217/685 (31%), Gaps = 31/685 (4%) Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 + + + S ++ G I ++ T+R Sbjct: 14 RTILARMAMTLGADIQVEAFASPIEALDWFGDTNI---PDLVIADCRMPMMDGAAFTARI 70 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 L W G V + + G + F + + + Sbjct: 71 RA--LGWGGDVPVMVVTAQEDREGRISALAAGATDFLSSPVDHTEFLTRARNLLQLGWHQ 128 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 ++ + G R + V Y + Sbjct: 129 KRARSPVQLEQEL---ENSRAAQAEILRGSRDRLLQVIDTVPALVSATDAEGNYIF--VN 183 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 + V + + Y ++ E L Sbjct: 184 RFHARVMGAGQGRNDAASQLRDRQVLETGLPTA--RYEESIADRYGMERILLTSKIPFYD 241 Query: 301 FSVCLLYMVR---IYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAG 349 + + Y++ + R H A D LT LP+ L Q Sbjct: 242 DASGMRYVLTTSLDITDRKKAERELHHLAYYDQLTGLPSRSKLETEMQVLLRQRGADGPP 301 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 +F + +D + ++ G + +R + L + + +L G E +V Sbjct: 302 FAFVLMDLDRFKGINDTQGHTIGDLLLRKVALRLRTALPRAGIIARLGGDEFAIV-HDVI 360 Query: 410 TEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 HM + +R + +G A F T + LL + ++ Sbjct: 361 DAADAAHMAERIVGIFARPFTLGDRVTSVGASAGVTLFPARGATFETLLKRADLAMYRAK 420 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 +E + L +R A++ + +L+ QP + G + ++ Sbjct: 421 NEGRCR-YAFFDEEMEQAFAATTELEQALRRAVENEEFVLHYQPQIDLASGTLCGVEALI 479 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 ++ G ++ P FLPL + L A + L + A D R +VNL + Sbjct: 480 RWVQPGGDLVHPGCFLPLAEETGLIAPMTVWSLREACRQAARWQSDGIHIRVAVNLSGVL 539 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q ++ ++ + P + LE+TE N ES+ + L + G +AIDDFG Sbjct: 540 FRQHDVHRLVVDATTEAGLDPSFLELELTETAVIENPESAGRQLAALQQMGVSVAIDDFG 599 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGYA+ L RL +KID VF++D+ ++ IV++I L K + V+AE +E Q Sbjct: 600 TGYASLVYLTRLPIHRLKIDRVFIQDLGSSPGSRAIVKAIIALGKNLGIRVIAEGIERQD 659 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q L + Q QG+ G P P A Sbjct: 660 QLRWLEEQDCQEAQGFYFGYPVPPA 684 >UniRef50_C6DFX5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=Enterobacteriaceae RepID=C6DFX5_PECCP Length = 722 Score = 603 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 103/563 (18%), Positives = 203/563 (36%), Gaps = 21/563 (3%) Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL-----LLLLCTPYENDFIAG 241 + + S ++ RR + R ++ + ++L ++ + + Sbjct: 148 LQDLASLVMDKLEMRRLELARRASQVRFENIANTSPDTILCVNEKGMITFWNTAAEHMLE 207 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY---NQNFLQGVETEYSLAFILAVL 298 Y + + L+ N + + +++ Sbjct: 208 YTDEEIIGRSINTIVPDAFVVQLNHLVADRDSLMKGVTLELNVQAKSGSLVPVELSVSMW 267 Query: 299 IS-FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG----KSFC 353 ++ ++R R L A DPLT L N L E Sbjct: 268 EDNDNISYGAILRDITERRRNEERLFLLAHLDPLTGLANRTLLTSNLETALKNEPAVCIM 327 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + + + + + ++ + + ++ G E L+ G + Sbjct: 328 MVDLDGFKDVNDSLGHSSGDNILVHVAKKIKATVRSGDVVARMGGDEFALLFPGLNDKKV 387 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + S+ + ++ +++ + T+Q LL Q+ + Sbjct: 388 AGKIAEQIIHEISQAMIIDDHQINISASIGAVLYPEYGLTVQDLLTSADLALYQAKSEGR 447 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + A +Q + ++ QP E G + +L Sbjct: 448 N-CYRFFTRELLEVFQAKHAFQLEFVRAYEQHEFEMFYQPQVKLATNEIVGAEALLRWRH 506 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQ 586 + G+++P FL + + R ++E+ + A + R S+NL Sbjct: 507 PERGLLSPAAFLTALENGPWAERVGDWIVETACRQAAEWCRESDRYFRISINLFSAQFRT 566 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +A +I+ + R + P ++ LEITE E+ + ++ L G IA DD+GTGY Sbjct: 567 GMLAQKIMDILARTGLQPSSLELEITENIILRYDENMLQPLKALRDAGIGIAFDDYGTGY 626 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 A+ LK +KID FV+ + + DA IVR+I L K+ L V+AE VET +Q Sbjct: 627 ASLSMLKNYPVTRLKIDQTFVRTMCESPPDAAIVRAILYLGKSFGLGVIAEGVETLEQSE 686 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L G + QGYL G P P + Sbjct: 687 RLRGKGCEEAQGYLFGHPMPAEE 709 >UniRef50_Q0A564 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A564_ALHEH Length = 1023 Score = 603 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 110/539 (20%), Positives = 193/539 (35%), Gaps = 28/539 (5%) Query: 216 TLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIF---TLGVGKLRYPFLNLTW 267 ++ A +L+ +L I GY F L Sbjct: 469 SVFTSANEGILITDPQARILMVNQAFTRITGYHQDEVEGRDPKLLASGRHGPEFFQELWR 528 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHL 324 + + Y ++ + S + ++ + R+ Sbjct: 529 VLDEHDHWQGELWNRRKSGELYLQLITISAVRDESGRLINYVGLLSDITDMKAYQRKLEF 588 Query: 325 QALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCI 376 DPLT LPN L + + + +D+ + ++ +G + + Sbjct: 589 LTHYDPLTELPNRVLLLDRLRKAMQLAQREQRRVCVAYVDLDDFKTINDVHGHRVGDQVL 648 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 + L +E + +L G E +V + M + +R I L Sbjct: 649 LELASRLSAARREGDTASRLSGDEFAMVFVNLGSVAECHRMAARVLDAVARPITIEGVAL 708 Query: 434 DMGYGAAWGRFDGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + ++E + LL Q Q+ + Q Q L Sbjct: 709 QTSASIGVAHYPQDEEVDAEQLLRQADQAMYQAKLQGKNR-HHVFDVAGDRQLRDQHESL 767 Query: 493 NTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 + AL +G+ +L+ QP N G + ++ + G++ P FL + L Sbjct: 768 TRLELALARGEFVLHYQPKVNLRTREVVGAEALIRWQHPERGLLPPAAFLDDLNGQPLEV 827 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVI 608 V+ L+ + T SVN+ L L Q + +I L R+ + ++ Sbjct: 828 AVSRWVMARALEQVETWSEQGVHLPVSVNVPALHLQQADFVDQIRELLARHPGLPRNSLE 887 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEI E A ++ + I+ G ++DDFGTGYA+ LKR+ I+KID FV+ Sbjct: 888 LEILESSALASLDHVSRVIQGCAALGVDFSLDDFGTGYASLSYLKRIPVRIVKIDRSFVR 947 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 D++ + D ++ I L + L ++AE VET +Q L +LG + QGY IGRP P Sbjct: 948 DMLEDADDLALLEGIVRLTQVFDLQLIAEGVETPEQGERLLELGCEQAQGYGIGRPMPA 1006 >UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89S23_BRAJA Length = 618 Score = 603 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 103/580 (17%), Positives = 207/580 (35%), Gaps = 36/580 (6%) Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------ 227 L+ + L + T+ ++V Sbjct: 26 LGELVSAAYEANERDRHRVIDASAHTHDEVEQDLLRTREFLDTIVENIPIAVFAKCAKDS 85 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG--- 284 + + G + + FL+G Sbjct: 86 RYILLNRAGEDYYGLPREQMLGRTPE--EIFPADVARVVNEQDRRVVDTGEPMFLEGHLL 143 Query: 285 ----VETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + + ++ + ++ ++ R A D LT LPN Sbjct: 144 EVGVNGHDRVVNSRKLLIRDGNGTPQYVVGVIEDVTEQLASQARISHLAHHDALTDLPNR 203 Query: 338 RALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 A ++ + L +D + ++ +G + + L + Sbjct: 204 SAFNAELDERLELAQEALTSFAVLSLDLDRFKEVNDVFGHPVGD-MLMRAAADRLAAEAD 262 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDG 446 + ++ G E ++++ + + L +++ ++ +G + Sbjct: 263 GAFVARIGGDEFMILMPDNARREDMLTLAERLVEVIGKELEIDDYLSQVGVSVGIAVYPD 322 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + LL ++ + E + + LL + +R AL+Q L+ Sbjct: 323 DGVDAATLLANADSALYRAKREGRAR-VRFFESETDQELRDRRLLQHDLRQALEQNQFLV 381 Query: 507 YAQPI--RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 + QP + E G++ +L G + PD+F+PL + L + VL + A Sbjct: 382 HFQPQARMDGEVIGFEALLRWNHPTRGFVPPDRFIPLAEENGLIVQIGEWVLREACREAA 441 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + P + +VNL P+ + ++ I ++ ++P + +EITE + ++ Sbjct: 442 SWPR---PLQVAVNLSPVQVQAGDLERSIHQILLETGLAPTRLEVEITEGVLIGDFTRAL 498 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G RIA+DDFGTGY++ L+ D IKID F+ ++ A IVR++ Sbjct: 499 NLLRRLKALGIRIAMDDFGTGYSSLSYLQSFPFDKIKIDRSFISNLEATPQSAEIVRAVL 558 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 LA A ++ V+AE VET+ Q+A L + + +QGYL+GRP Sbjct: 559 SLAHALNIPVIAEGVETEAQRAFLAREACEEMQGYLVGRP 598 >UniRef50_C7R7Z7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7Z7_KANKD Length = 887 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 95/613 (15%), Positives = 202/613 (32%), Gaps = 23/613 (3%) Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 + + + P + D + + ++ V + + + Sbjct: 272 LARTDEHFYAARRGIPQRYEILTPDMQGNIHYLHVTNMPIIVDGQVTGVHGIALDLTREK 331 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI---IF 251 + + A + + I GY Sbjct: 332 QHEERAKILERSVESSTHGLLISDARADD---FPTIYVNPAFERITGYSKEDIIGKNCRI 388 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYM 308 G + + A+ ++ + T + +++ + + + Sbjct: 389 LQGPDTDQKVRQAIHNALEQQTEISTIIKNYKKDGTPFWNELLISPVKDDNDNVTHFIGL 448 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKS---FCCLRIDNLE 361 A DPLT L N ALE+ + + S + +D + Sbjct: 449 QNDITERIQRQETLEFHASHDPLTHLKNRSALERYLTSWAKNKDQISNTYILFIDLDGFK 508 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + L + E L + G E + V+ +++ + L Sbjct: 509 PINDSLGHEFGDQILVETAQRLNSEIVEPNMLARFGGDEFVAVIQDLTDSHQVEALARKL 568 Query: 422 N---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + ++ + + + + L+ + ++ Sbjct: 569 LERVAESYKVDDIEVSLSAAIGITSSQESFKHPMELIQRADIAMYEAKKRGGSYIY-WHT 627 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPD 536 ++ +QV + ++ A+ Q L+ QPI + G + ++ G ++P Sbjct: 628 AELNTNIDQQVAVRAQLQDAILQNQFELFYQPIMSHDNNIGGVEALIRWKHPIKGYVSPA 687 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 +F+P+ + VL + SVN P+ +++ +I Sbjct: 688 EFIPVAERTGQIIPISEWVLNRACTDIQELKRFGIN-SVSVNFSPIQFYREDFVEKIAET 746 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 K ++I P + +EITE + + + +L + G +AIDDFG+G+A+ L L Sbjct: 747 LKHHNIQPGEITVEITENVLVHDTDHITELLNELRQLGLDVAIDDFGSGFASLRYLNMLP 806 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 + +KID F +I N +A I R I + + VVAE VET ++ L + ++ Sbjct: 807 VNKLKIDRSFTGNIHQNKHNAAITRGILGMTTEMEIEVVAEGVETDEEYQYLREHKCDFM 866 Query: 717 QGYLIGRPQPLAD 729 QGYL RP P+ + Sbjct: 867 QGYLFCRPIPIKE 879 >UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X759_METSD Length = 765 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 84/441 (19%), Positives = 166/441 (37%), Gaps = 30/441 (6%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + QA D LT LPN + + + L +DN + ++ G Sbjct: 311 ASQKLIWKQANYDFLTGLPNRPMFHKQLAEEIHKSLQHQQPLVLMFLDLDNFKQINDQLG 370 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 + + + + ++ L +L G E +VLS + + +++ + + + Sbjct: 371 HSIGDKLLVETGARIAAVARDCTLLARLGGDEFTIVLSNVQNQQQVEWLCERILRQVSLP 430 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 N + + F + ++ L+ ++ + Sbjct: 431 FTIENHVVYVTTSIGIASFPEHSRDVETLMKYADQAMYEAKRLGRNR-YQFFSPSMQELA 489 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ + N +R AL++ +L++Y QPI + E + ++ G++ P +F+P+ Sbjct: 490 AHKLQVSNDLRHALNRHELVMYYQPIVDLATNEIHKAEALVRWQHPTRGLVPPFEFIPVA 549 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG---------------PRFSVNLMPLTLLQK 587 + + R V + T + + S+N+ PL Sbjct: 550 EETGMINRMGDWVFRQSARDTVTLVQESLASRSAPPEGNVVDATIFQVSINVSPLQFQSS 609 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + + +EITE ++ + Q G +IDDFGTGY+ Sbjct: 610 QELQTWQAYLDQIGLPAECLAIEITEGLLLEASDQVKATLTQFRDAGIATSIDDFGTGYS 669 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ D +KID FV+++ D ++ I D+A + V+AE VET+ Q L Sbjct: 670 SLAYLKKFHIDFVKIDRSFVQNLGAGNDDMVLCEVIVDMAHRLGMRVIAEGVETEAQLEL 729 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L + G + QGYL P Sbjct: 730 LKRAGCDFAQGYLFSPALPFD 750 >UniRef50_B1YEJ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YEJ2_EXIS2 Length = 878 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 116/692 (16%), Positives = 230/692 (33%), Gaps = 36/692 (5%) Query: 58 IFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT 117 + R + L + L T V + ++ + +G Sbjct: 196 WYERRRLFQFLFAGLLLQVGADTLFVYMTTVSGDNAIRLIDPLFILGLLMIGVSGHIVSP 255 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 R + +G YL+ + +A + + Sbjct: 256 VDSKEDRQSKQRIKVQVGKLFLPYLLVILLFLTMAFYARRDEALNGL-------MIGCAV 308 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT----- 232 ++ MI+S E+R +L +V L L Sbjct: 309 TILLILVRQILMILSHQELIQEIHEKADELEVSEERYKSLFTYHPDAVYSLDLKGRIESA 368 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + + R + + F + + L Sbjct: 369 NPSFEKLTEQHAEEL------VGKTYRQFTTWQQTSTDKATAQQFETIFQKSGGPDVLLN 422 Query: 293 FILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 + V + + + + A D LT N E+ Sbjct: 423 VTNIPIRVRDRFVGMYGIGQDITTIRENELKIRRLAYYDHLTGAINRTYFEEVLHHLIET 482 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + C + +D+ + ++ +G + + + + L + ++ + + G E + Sbjct: 483 EQADETIVLCFIDLDDFKLVNDSFGHHVGDQLLIQVAKRLQEAAEPDDLVARQGGDEFTV 542 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAA-WGRFDGNQETLQPLLGQLS 459 +L ++ + + L R L +++ + LL Q Sbjct: 543 ILRNVTSDDQARCRTARLLDDLKRTYAIEGIELISNPSIGAVSCRRTSEKHVVTLLKQAD 602 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EG 516 Q+ ++ E ++ + + ++ L + + A++ L+L+ QP + + Sbjct: 603 LAMYQAK-TGGGKSIIFF-EDIAEKASYRLRLESELPIAIETNQLILHYQPQVDTVTYKM 660 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 G + ++ + G++TP+ F+P+ + + R VL D + Sbjct: 661 VGVEGLIRWNHPELGMITPNDFIPMAEEAGMIIRLGEWVLREGFLQAKQWQDDGLNLKVG 720 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +N+ +IRL + + P + LEITE A + E ++ + +L GF Sbjct: 721 LNVSMQQFHHPTFVLTLIRLIEETKVDPTRIDLEITEVSAVEDIEETVLTMNRLKDLGFT 780 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 I+IDDFGTGY++ RL D +KI FV+ I T ++ SI LAK+ L V+A Sbjct: 781 ISIDDFGTGYSSLSRLADFPIDTLKIPREFVEKIQPATTGYSMISSIIHLAKSLHLEVIA 840 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET +Q +L++L +QGY GRP P Sbjct: 841 EGVETLEQVNVLNRLECSRMQGYYFGRPMPAE 872 >UniRef50_C1AC92 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC92_GEMAT Length = 556 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 103/541 (19%), Positives = 189/541 (34%), Gaps = 34/541 (6%) Query: 220 LAALSVLLLL----LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + ++ + + + G + L T Sbjct: 3 HSPEAIAVHRNGRLVYANEAAAHLIGARQGADILRRRASDFVHPDDL-ALVQQRLTSGPA 61 Query: 276 NYNQNFLQGVETEYSLA-FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 + + + +++ + + + R + L R A D LT L Sbjct: 62 RVQYRLRRLDDGIREVEAVSVSIAFEGTPAMQTLFRDVTERKELEARLLHGAFHDALTGL 121 Query: 335 PNFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 N E + L +D+ + ++ G +R++ ++ Sbjct: 122 ANRALFRDRLEHALQVAGRDPDHRIAVLFLDLDDFKGVNDSLGHDAGDQLLRTVSERIMA 181 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWG 442 ++ ++ + + G E ++L TE +VN + R + + + Sbjct: 182 EVRASDTVARFGGDEFAVLLERLPTESEALTIVNRIKVALRRPLMLEGRLMSVATSVGVA 241 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL--- 499 + + + LL ++ E + +++ L IR A Sbjct: 242 -YATPADDVDTLLRNADVAMYEAKEAGKAR-HAVFEPSMYAAIVQRLQLEADIRMAAGAP 299 Query: 500 DQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 ++ L L QPI + G + +L G +TP F+P+ + VL Sbjct: 300 ERSGLFLAYQPIVDLRTGAVRGLEALLRWDHPTRGTVTPSVFVPVAEHTGVIVPLGRWVL 359 Query: 557 ESLLKWLATHP------CDKKG--PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 E L + P SVN+ L +++ + + +R ++ Sbjct: 360 EQACTQLMAWRTQWWRERRQPDSVPSVSVNISGRQLAEEDFVDEVAAILQRTGAPAGSIT 419 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE N ESS+ + L G R+AIDDFGTGY++ L++ D++KID FV+ Sbjct: 420 LEITESVIMRNTESSLRTLSALKALGLRLAIDDFGTGYSSLSYLQKFPVDVLKIDRAFVE 479 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + DA + R+I L L VAE VET QQ L +G QGYL +P+ Sbjct: 480 GVAQGGSDAALARTIVTLGTTLGLRTVAEGVETSSQQEALEAMGCVDGQGYLFSPARPVD 539 Query: 729 D 729 + Sbjct: 540 E 540 >UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction protein n=3 Tax=Alteromonadales RepID=B4RZW0_ALTMD Length = 794 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 98/430 (22%), Positives = 181/430 (42%), Gaps = 19/430 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 E + QA D LT LPN + + + L +DN + ++ Sbjct: 356 ERERASELIWKQANFDTLTGLPNRNLMLDHLQLALKTADREGDRVAVAFLDLDNFKDIND 415 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + + + ++ N+ + +L G E +++L+ ET + +V + Sbjct: 416 TLGHDVGDQLLIECAERIKQCLRANDTVSRLGGDEFVVILNSIETLSSIDIVVQKILDVI 475 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + N + + + ++ LL + + + + Sbjct: 476 LKPYLINVERVHTSASLGVTLYPDDARDIKGLLKNADQAMYGAKDLGKN-SYKYYTQDMQ 534 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 K++ LLN +R A+ +L + QPI + + + +L + G + PD+F+ Sbjct: 535 AVAVKRITLLNDLRYAIQNDELFIEYQPITSFKDGKAIKAEALLRWQHPEKGRIAPDEFI 594 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT-LLQK-NIAGRIIRL 596 PL + L V E + K + + + +N P Q+ +I + RL Sbjct: 595 PLAEESGLIIEISNWVFEEVCKNVKRWQTHYCRELQICINTSPSQYFQQETSITDWLTRL 654 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +I+ ++++LE+TE + + Q + G IA+DDFGTGY++ LK+L Sbjct: 655 LDE-NIAARSILLEVTENLLMEADTNVSKKLFQFRQAGVDIALDDFGTGYSSISYLKKLP 713 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FVK + + D ++ +I +AK + VVAE VETQ+Q +L+ +G + Sbjct: 714 TDYLKIDKSFVKTMTDVSNDKVLCEAIIVMAKKLGIKVVAEGVETQEQYDILNNMGCDFG 773 Query: 717 QGYLIGRPQP 726 QGY I RP Sbjct: 774 QGYFIARPMS 783 >UniRef50_A1VFP9 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=5 Tax=Desulfovibrio vulgaris RepID=A1VFP9_DESVV Length = 951 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 122/762 (16%), Positives = 228/762 (29%), Gaps = 59/762 (7%) Query: 17 AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNL 76 F + L + F+S I S+ ++G + + Sbjct: 177 PFAGLLSLYEGPLFVSARPITRSTDPTRRGGW--------LVWGRYALGALPPFFSDLLP 228 Query: 77 WNFHLSFLQTAVMLGSQTFVVLCAC--------------AILRWQLGTRWRYGLTSRYVW 122 L + + A L + GL R + Sbjct: 229 HAAQLFTPGSYDTPPQVAALFTSAAKRDPQVRPLDDSTMEGLAVLTDIKGDPGLAMRILM 288 Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTF-----FGDADAIFTVVDLLSLFTAVL 177 R + + + LVG+ F A + + Sbjct: 289 PREASEQGHKALMLFSLVILVGTALVAATAQVLFQKHVGRRAASLAADIERVRISGFRSP 348 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL----LLLCTP 233 + + + + + + E L A ++LL + Sbjct: 349 LPADGDDEIAAIGHAINRLIRDREQAAHTLQENEAFFRLLYEQAPDAMLLLLDESIASAN 408 Query: 234 YENDFIAG---------YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 + G + + FF G F + L + F++ Sbjct: 409 DAAARLLGVADRKDLLSHPLIEFFPPAQEGGIPSVEGFARQVENTTPLGNRRFEWIFMRS 468 Query: 285 VETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 +E L+ ++ +L R + + A D LT L N Sbjct: 469 GGSEVPCEVTLSPVMQRGRRMLHLTARDISERKRNEAQITHLAFHDSLTGLANRVLFLDR 528 Query: 344 PEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLY 394 + + +D + ++ G + I + ++E + + Sbjct: 529 LAHAIATCRRAPDRNFAVLFIDLDRFKVINDSLGHAAGDGLLSIIASAIAANIRETDTVA 588 Query: 395 QLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 ++ G E +++ P + M + + + L + + Sbjct: 589 RISGDEFTVLVHEPPSPRFAIKMARRILERIKQPLTIEGFELVISASMGIVIGNSGYTDP 648 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 +L ++ L + Q + L N +R A+D GDL + QPI Sbjct: 649 HQVLRDADIAMYKAKRAGKDK-LRVFGSRMHEQALHAMRLENDLRQAIDNGDLSCHYQPI 707 Query: 512 RNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 N E EG++ + G + P F+P+ +L + A+ Sbjct: 708 VNLESGALEGFEALARWQHPTLGNIPPSTFIPIAEDTGRIIPLGRAMLHKACAFAASIRG 767 Query: 569 DKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 P VNL P L + + + + P+ ++LEITE N + Sbjct: 768 TLPQGDPVIHVNLSPRQFLSRQLLREVEAALDATGLPPELLVLEITESLLMENPRVAKSI 827 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L + G R+++DDFGTGY++ L+ D +KID F++ + IVR+I L Sbjct: 828 MAGLKEIGVRLSLDDFGTGYSSLGSLQDYPLDSVKIDRSFIRAMNDGRDAEHIVRAILKL 887 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L + E VET Q A L G +QG+L +P P Sbjct: 888 VSHLRLEAICEGVETTMQAANLMAFGATRMQGFLFAKPMPSE 929 >UniRef50_C1RHA2 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein (Fragment) n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHA2_9CELL Length = 721 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 98/615 (15%), Positives = 206/615 (33%), Gaps = 42/615 (6%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 L + F +D F + ++ ++ + V+ R + Sbjct: 97 LTLVVPVRFEGSDHGFLALTGPFDVMEESVFERFNHWAVLLAVALDQD-----RAVEALR 151 Query: 209 GKEKRAFTLSWLAALSVLLLLL-------------CTPYENDFIAGYLVPVFFIIFTLGV 255 E+R + A + L Y + I G + Sbjct: 152 VSEERYALAAEAANDGMWDWDLETGAVYYSARWKALLGYRDHEIEGTSHEWLSRVHPADR 211 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL---AFILAVLISFSVCLLYMVRIY 312 G + + + + + A + + L+ + Sbjct: 212 GAVDRALAHHLD--GRDPAMEVEYRLRTADGSYRWMITSALSVRDADGTATRLVGSMTDV 269 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFM 363 + L + A D LT LPN + Q + + L +D + + Sbjct: 270 TERKQLEDQLRHDAHYDLLTGLPNRALFLERLNQSILRTRRHPDYRFAVIFLDLDGFKVV 329 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + + L ++ + + + G E L++ + L +V L S Sbjct: 330 NDSLGHQVGDELLIEVAARLSSEVRATDTVSRFGGDEFALLVDDVKDVAGLPDVVRRLLS 389 Query: 424 RQIHW---NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + A +T L ++ A A+ + Sbjct: 390 VVSVPVVLEDRTRTVSAAAGIAVSASGYDTADEYLRDADTAMYRAKAEGPG-AVVLFDTA 448 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 + + ++ + + + + + + L+ QPI ++ G + ++ G++ P+ Sbjct: 449 MHARAMARLQMESALDQGIAEDEFELFYQPIVRMDTRQIVGMEALIRWRHPQRGLVAPND 508 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAGRII 594 FLP+ + + + + G SVNL ++ + Sbjct: 509 FLPVAEATGHTRPIGQWTIGEACRQIREWLDVVPGFEACTVSVNLSNRQFWDPDLRPTLR 568 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 RY + +++ E+TE N + ++ + QL + G + +DDFGTG+++ L Sbjct: 569 SALDRYAVPTSSIVFEVTEGVIMDNQDVAVSFLHQLREEGVELHVDDFGTGHSSLSSLHE 628 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L +KID FV+ + T+ +V + + L V+AE +ET+++ A L +LG Sbjct: 629 LPVGALKIDRSFVQRMQTSPRSHELVGLMVTMGTRFGLDVIAEGIETEEEAAALSRLGCP 688 Query: 715 YLQGYLIGRPQPLAD 729 Y QGYL RP P + Sbjct: 689 YAQGYLFSRPLPATE 703 >UniRef50_C9NJG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=20 Tax=Streptomyces RepID=C9NJG7_9ACTO Length = 724 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 120/667 (17%), Positives = 218/667 (32%), Gaps = 38/667 (5%) Query: 97 VLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF--PLKIS 154 +L L L R + V L P + ++ +V S+ Sbjct: 50 LLPLARELSDTLHRRVFDAAPAHRVGAGLVAAHCTDPDALSSTLGVVDSYLVLYCGGNGP 109 Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA 214 D+ + + L A E R Sbjct: 110 VELSTEDSRARCARIQHALAGGFTQALRERTLAEQEAIARSALTARSHAEQALHATEARF 169 Query: 215 FTLSWLAALSVLLLLLCTP-----YENDFIAG------YLVPVFFIIFTLGVGKLRYPFL 263 + AA+ + + L + G V + + + Sbjct: 170 RAVFKDAAVGIGIADLDGNILEINDTLTRMFGGLENHVRSHKVNEWVHPEDSPHVWKYYE 229 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNR 320 L + + + + T +++L L ++ LN Sbjct: 230 ELVRGERE--HYSVEKPYYRNDGTVLWTNLTVSLLRDPEGRPEYQLALLEDTTERRLLNL 287 Query: 321 RWHLQALTDPLTLLPNFRALEQAP------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 R +A D LT LPN + + C L +D + ++ G Sbjct: 288 RLRYEATHDALTGLPNRTLFFERLEKALAPREGMRFGLCYLDLDGFKAINDSLGHAAGDR 347 Query: 375 CIRSICRTLLPLM-QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNN 430 + + L E + +L G E + + +GP TE + + + + + + Sbjct: 348 LLVEVADRLQSCATAPGEMVARLGGDEFVALTTGPRTEDEVHELAGRILLALATPVRLDG 407 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 L + + T +L ++ A + + + Sbjct: 408 RELTVRGSIGVVEGPSGERTPAEVLRSADITMYRAKAAGGNR-FALADAEADARAITRHG 466 Query: 491 LLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L + TALD+G+ + QP+ + G + ++ G++ PD+F+PL L Sbjct: 467 LTTALPTALDRGEFFIEYQPLVHLGDGSVHGAEALVRWCHPQHGVLGPDRFIPLAEHTGL 526 Query: 548 SARFDLQVLESLLKWLATHPCD---KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 VLE ++ R +VNL P L ++ + + +R + P Sbjct: 527 IVPLGRWVLEESVRQANFWKERHTDGGPLRINVNLSPTQLHHPSLVAETVDVLERSGLEP 586 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 A+ LE+TE + + + QL + G IA+DDFGTGY+N L+RL ++K+D Sbjct: 587 GALCLEVTESALIGADDDLLKPLRQLAEMGVDIALDDFGTGYSNLANLRRLPVSVLKLDR 646 Query: 665 VFVKDI---VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 F + + + +D IV I LA + L+V E VET Q L ++G QG+ Sbjct: 647 SFTQGMQHHPADPVDLKIVEGIVSLAHSLDLAVTVEGVETGAQAEQLRQIGCDTAQGWYY 706 Query: 722 GRPQPLA 728 RP Sbjct: 707 ARPGAPD 713 >UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FF8_SACD2 Length = 581 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 94/417 (22%), Positives = 174/417 (41%), Gaps = 16/417 (3%) Query: 328 TDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 DPLT L N L + + L ID + ++ G+ + I Sbjct: 145 FDPLTGLANRAQLYEQLRRAIDYGRVHRECVTVMMLNIDRFKNINDSLGVGAGDDVLIQI 204 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMG 436 L ++++N+ + +L E +L+L + + + + + + + ++ + Sbjct: 205 SEILRNVLRDNDTVARLGSDEFILLLDKVDNPHHITKIADKILNAIGQPLNICGHEITCT 264 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 +F + +++ LL ++ + +S +T +L+ N +R Sbjct: 265 ASLGVSQFPIHGDSIDLLLKHADEAMARAKSEGKNR-YKIYTAQMSERTVDALLMENDLR 323 Query: 497 TALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL+Q + +L+ QP + G + ++ G+++P F+PL + L Sbjct: 324 RALEQDEFILFYQPQVHLRTGKIIGLEALIRWQHKTKGVISPLDFIPLAEETGLIEEVGA 383 Query: 554 QVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 VL + + +VNL Q + A ++ + + PQ + LEIT Sbjct: 384 WVLAHACERFHHWLKQGLSLGKVAVNLSARQFRQAHFAETVVEALNKSKLPPQYLELEIT 443 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + + + + L+K G IAIDDFGTGY++ LK+ + +KID F+ D+ + Sbjct: 444 ESLTMQDTDEVLQTLGYLNKLGLSIAIDDFGTGYSSLSYLKKFPVNKLKIDRTFIHDVGS 503 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D I +SI DLA S+ VVAE VE Q L+ G +QGY +P + Sbjct: 504 ELDDGAIAKSIIDLAHNMSMLVVAEGVERLGQSRWLYDQGCDQVQGYYFCKPLSENE 560 >UniRef50_A8MI55 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MI55_ALKOO Length = 737 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 94/425 (22%), Positives = 181/425 (42%), Gaps = 16/425 (3%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 + H A D +T LPN L + +Q+ L +D + ++ G M Sbjct: 304 EKVHNLAYYDGITKLPNRVYLLKILGECIDSANDQKNRFGILNLDLDRFKHINDTLGHHM 363 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 ++ + + +++ N + G E ++++ + + L + N + + Sbjct: 364 GDEILKLVGERIGRILKPNNFFARFGGDEFIILVKHIQEDKELIDLANQIIKEMDQPFML 423 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N+ L + + ETL L+ + ++ +S + + Sbjct: 424 NSHRLFLTTSIGISIYPEGGETLNDLMKNSDIAMYAAKGKGGNQYY-IYDKSLSEKQMEA 482 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 ++L+N +R A+D +L L+ QPI N G + +L + G++ P+ F+PL + Sbjct: 483 LILINQLRNAVDHDELTLFYQPIMNTSTGNIVGVEALLRWYQPGHGMIGPNTFIPLAEET 542 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 +L V ++ + R +N+ +K I++ K + P Sbjct: 543 DLIISIGKWVFRNVCAQIKDWIHRGYDVKRVYINVSAKQFQEKGFLESILQALKEAELPP 602 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + +EITE + + ++ I++L G I+IDDFGTGY+N+ LK + D IKID Sbjct: 603 KYIGIEITETVIIQDIDHTIELIKKLKDIGISISIDDFGTGYSNFNYLKEMGVDEIKIDR 662 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F+ + N+ I ++I LA ++V AE VET++Q L + +QG+ RP Sbjct: 663 SFIAETTKNSKKRAITKTIILLAHQLDIAVTAEGVETKEQLEFLRESSCSKIQGFYYSRP 722 Query: 725 QPLAD 729 P + Sbjct: 723 VPPEE 727 >UniRef50_Q7UUK0 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UUK0_RHOBA Length = 739 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 98/579 (16%), Positives = 204/579 (35%), Gaps = 52/579 (8%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAG-- 241 + ++ Q+ + + E+R + + L + G Sbjct: 163 VTIARISTQLQLKSALQRLRQSEERYALTARGTNDGMWDWNLVTGELYLSPRWRSMVGLD 222 Query: 242 ------YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + +I +++ G +T + Sbjct: 223 GVSWTPHGSEWMDLIHHEDRRRVQLDLEAHL--CGETDHFETELRMQDGHQTYRWMLCRG 280 Query: 296 AVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------ 346 + + + + D LT LPN ++ Sbjct: 281 LAVKDSHGTAYRIAGSLTDITEGKVA----------DALTGLPNRMLFNDRVQRCVDHQA 330 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE-KLYQLPGSELL 402 + + + +D+ + ++ H+G + SI L +++++ + ++ G E Sbjct: 331 RNPQNRFAVIFMDVDDFKLVNDHFGHDAGDDFLVSIASRLDTSLRKSDAIIARMGGDEFA 390 Query: 403 LVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGN------QETLQP 453 ++L + L + + + + Q T + Sbjct: 391 VLLENIRHVDEAVAVAMRLHDKMRAPFPVGDREILTRASMGIVVSEFDPESSVPQATGEE 450 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 LL + + L + + + ++ L + +R +L++ +L L QP+ Sbjct: 451 LLVRADTAMYFAKNQS-ELPYAIFNDDMLAENMLRLELGSQLRHSLERDELALLYQPMVQ 509 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD- 569 + + G++ +L + G ++P+ F+P+ L VL + + Sbjct: 510 LCDGKTAGFEALLRWEHPEHGTVSPNTFIPIAESNGLIIEIGKWVLRKACQQAMQWQEEF 569 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + SVN+ L + + + P+ + LE+TE + ES++ + Q Sbjct: 570 GRPIMISVNVSVRQLSSTGFVEAVTETLEETKLQPECLKLEVTESFLMQDPESTIELLHQ 629 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G I IDDFGTGY++ L R+ DI+K+D FV+ + + +A ++RSI LAK+ Sbjct: 630 LRRIGLTIGIDDFGTGYSSLSYLHRMPLDILKVDRSFVESMFDSEKNASLIRSILALAKS 689 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+VVAE VET Q L LG ++QG+ +P Sbjct: 690 LELNVVAEGVETLAQLQRLQDLGCHFVQGFYFSQPVKPE 728 >UniRef50_A5UZP0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Roseiflexus RepID=A5UZP0_ROSS1 Length = 796 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 115/728 (15%), Positives = 245/728 (33%), Gaps = 35/728 (4%) Query: 35 AIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQT 94 A + F + + + V+ + + + Sbjct: 52 ATLLDISPFPEVPLELIASIVAVAPHVPILALVVDDVDSRASAALAAGAHDVIRSDAAAS 111 Query: 95 FVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIS 154 +V + + L ++ + + R L+ + + + F Sbjct: 112 VLVSRLRSAVAHHLDVHRDQPVSLKELVLRSSNPALLINRDGRITQANPAAVTLFGDLTG 171 Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF-------AQILWRRDIAPS 207 G+ V +L++ ++ A + Sbjct: 172 QLIGEPFGTPIVSNLVTTIEIPQRNGAPITAELFLLHVLDEHSDDAYLAILRAASRQHRL 231 Query: 208 LGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFI-IFTLGVGKLRYP 261 + + +++ L + G + + + Sbjct: 232 DVDLRLMMAAISSTSDGIVIADLDGIPHYQNPAFQAMVGLTLDDLRAAGGLQRLYRDPGV 291 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWL 318 AV + ++ L ++ S L+ + + + Sbjct: 292 ARAALAAVRNGQSYRGEMRLIDHRGNALNVHVNLDPVLDPSGRAIALIAVHTDVTQRKLT 351 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQEA---------GKSFCCLRIDNLEFMSRHYGL 369 R + DPLT L N L +Q + +D + ++ G Sbjct: 352 EARLAYLSSHDPLTGLANRTLLLDRLQQALDRRNRERSLPCGVLLINLDRFKQINDSLGH 411 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQI 426 + + ++ L + + + + + G E +V+ P + + + + + + Sbjct: 412 AVGDEVLIAVAGRLKHITRPGDTVARFGGDEFAVVIDSPGSVEDIWRVAKRVQHTLNHPV 471 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + L +G DG + LL Q+ A + EE + + Sbjct: 472 TVQDHSLTVGVSIGIAVDDGRAKDAMTLLHNADTALHQAKARGRSRIV-MFEEAMHTEAA 530 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 +Q+ L +R A+ L ++ QPI + E G++ ++ G++ PD FLP+ Sbjct: 531 RQLQLEIELRQAVQHQTLEMHYQPIVDLCSGELYGFEALMRWQHPSHGLLFPDSFLPIAE 590 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + + + + + SVN+ L Q ++ ++ ++ ++ Sbjct: 591 EAGIIPTLGNWSIAEVCRQARRWRDRFGAAADVPISVNIHSQHLDQADLFAQVEQVLRQQ 650 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 ++ A+ +EITE+ A ++ + + + L G R+ +DDFGTGY++ L RL D Sbjct: 651 NLPGAALTIEITEKAALNDLDLVLSQLLPLKALGVRVMLDDFGTGYSSLSHLARLPVDGG 710 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+ ++ + A IVR++ LA+ L+VVAE VET++Q+A L +L Y QG+L Sbjct: 711 KIDRSFVQSMMHDPHAATIVRAVITLARELQLNVVAEGVETEEQRAALLQLRCPYAQGWL 770 Query: 721 IGRPQPLA 728 GR Sbjct: 771 FGRAADAD 778 >UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5U6_ALHEH Length = 802 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 120/690 (17%), Positives = 222/690 (32%), Gaps = 42/690 (6%) Query: 62 RGVVPVLCGMFCTNLWNFHLSFLQTAVM----LGSQTFVVLCACAILRWQLGTRWRYGLT 117 R V+ + V + V + R +T Sbjct: 118 RVFGGVILTRADRHDIQTLSDLAGRHVYAVGEGSLGGWHVGREALLDVGVDPARDLARVT 177 Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 + ++ G + L + Sbjct: 178 FTGMPHDQVVEAVLAGEGDAGMVRTGILESMAREGRLDLDAVRVLEPRRTAGFPLQHSTH 237 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE-- 235 +Y + PH + + L + L Sbjct: 238 LYPEWPFSRL-----PHTPDAIAQAVTIALLEMPSGHPAARDGGYVGWSAPLSYGGVHEL 292 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + + + V + + + T + + + ++ Sbjct: 293 FQRLGEPPYEHWGGLDLRVVWEQHPAIVLALMLIVTGGMAGAVIKYRRLN-RSLAVEVDQ 351 Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------E 347 ++ + R A DPLT LPN L EQ Sbjct: 352 RRMVER------------QLRQHQARLTHLANHDPLTDLPNRLLLTTRLEQAVARATGSG 399 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + +R + L + E + +L G E +++L G Sbjct: 400 QRVAVLFLDLDRFKNINDSLGHAVGDDLLRILAERLRSQV-EANTVARLGGDEFIVLLDG 458 Query: 408 PETEGRLQHMVNILN---SRQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + L + L +G F N + L+ Q Sbjct: 459 ISDLELVDQQARELLELVAESFSVGGWRSLQVGGSIGISLFPDNAQDASELITQADAAMY 518 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 + A + ++ ++++ +R AL+ L ++ QP + G + Sbjct: 519 LAKAEGRN-TYRYYNQSLTAAASERLETETRLRRALELDHLEVFYQPQLDITTGALTGVE 577 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNL 579 ++ + G++ PD+F+P+ + L R QVLE +A D +VNL Sbjct: 578 ALVRWRDPEQGLIPPDRFIPVAEETGLIDRLGQQVLERACLQVAAWDRDGLPALDVAVNL 637 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 + + +I +R ++P+ ++LEITE + AE ++ + L G ++AI Sbjct: 638 SAHQIGDPRLCAKIRHALERSGLAPRRLVLEITESTLMTQAEGALGTLAGLKGLGVQVAI 697 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKR D +K+D FV+D+ + DA + ++I +A L V+AE V Sbjct: 698 DDFGTGYSSLAYLKRFAIDWLKVDRCFVQDLPEDRNDAELTQTIVYMAHNLGLRVLAEGV 757 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ETQ Q L LG QG+L P P + Sbjct: 758 ETQAQLDFLTHLGCDGWQGFLCSPPLPPQE 787 >UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2C5_DESAC Length = 777 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 121/748 (16%), Positives = 246/748 (32%), Gaps = 37/748 (4%) Query: 4 EHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRG 63 +I NI+ L F A+I ++ F A + + + G Sbjct: 24 RAEVIINIRWLLLIFAAV-----------GSALIIAAIPFGADLNATHVAVLCL--GLIV 70 Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLG-SQTFVVLCACAILRWQLGTRWRYGLTS---- 118 + CG+ + N H ++ + + L + + Sbjct: 71 LTLYNCGLHLLSRTNRHPLWIDRGQLTADTVLVSTLIFFSGAEHSWLWPLYVVIALEATF 130 Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 R + + ++ GS+ + P + T+ +L A + Sbjct: 131 LLRHPREVVVISSLGAALFAAILCAGSYGNVPQFNLHLLDNIGPQHTIDRVLLWLWACFL 190 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 + + + A L + + L Sbjct: 191 GCSATLIGSSFNSALTNESQETLSRENQLQRFMESAQDLIFAFDADNRIHYLNGAARQRL 250 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 P + L +L + E + ++ Sbjct: 251 DVDISGPALHVDQILDESELPRWNSKTCLLTVGTPFEPTSFRLRSAAGHELPVDCRISTA 310 Query: 299 ISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------AP--EQEA 348 + + R +R + + D LT L N + + + Sbjct: 311 ADGGTILHWV-VCRDLSTQLENEKRLYNLSNFDQLTGLTNRQEFSEQATNAMRLTKRLQQ 369 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + ID+L+ ++ + +R L ++E + + +L G++ + + Sbjct: 370 QMAVALISIDHLKVINETLTSEVGDSLLREFSVRLSQGVRETDLVGRLSGNQFAVAFTNI 429 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + ++ ++ L S+ + + + + A + G+ +++ LL + + Sbjct: 430 DDIQSIEQVMTKLRKKLSQPMTIGDQEMFVTSSAGLSIYPGDALSVEALLKKANSARYYV 489 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 AH + ++ ++N + AL + +L L QP N E + + Sbjct: 490 RAHGGNK-HQFYAPEMDEDIKNRLEMINGLHNALVRDELQLSYQPKVNLAEGEFHSVEVL 548 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 L G ++P F+P+ + + L VL + R +VN+ Sbjct: 549 LRWSHPTLGQVSPSDFIPMAEESGMIGELTLWVLRQACLQVHAWQKQGLPPIRVAVNVSG 608 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + + L + PQ + +EITE + +++ + +L K G +AIDD Sbjct: 609 HQLQSSDFITALTDLLNETGLDPQWLEIEITESVLMQSPTAAIATLNKLRKLGIHLAIDD 668 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR +KID F+KDI + A I SI ++ K+ L+V+AE VET Sbjct: 669 FGTGYSSLAYLKRFPVHSLKIDRSFIKDIEQSERYATITSSIIEMGKSLHLTVIAEGVET 728 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L + +QG+L P + Sbjct: 729 LGQMAFLKEQNCDEIQGFLYSMPVNADE 756 >UniRef50_A9BVR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BVR1_DELAS Length = 828 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 118/667 (17%), Positives = 218/667 (32%), Gaps = 41/667 (6%) Query: 101 CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA 160 + R+ L+ D + Sbjct: 125 LLGELRATLESAADAILVCDPDGRIRAFNHRFATLWGIPEALLVRRNDVAILDHLASQVR 184 Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR--------------DIAP 206 DA L L L+ L + A RR A Sbjct: 185 DAESYARQLKLLSAQPLMEAADVLDLRDGRILERRAVPQLRRGLPMGRIFSFRDITAEAQ 244 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLC-----TPYENDFIAGYLV---PVFFIIFTLGVGKL 258 + + A + + + + T + + G + +F G+ Sbjct: 245 TQAGLELAARVFESSLDGIFIADGYMDVARTNPACERLLGGMPVQGRTVESLFEASEGQA 304 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRS 315 + Q ++ L + ++ +R + Sbjct: 305 DTLGDLARIQWHQGGFWEGDLWLRQAGGARCAVRLSWVPLRNAQGDVVQSIGFMRDLTQQ 364 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHY 367 +R A +D LT LPN L + + + + +D + ++ Sbjct: 365 RVAQQRIEQLAYSDALTGLPNRLNLTERVDAAIEAARAGGTVFSILFIDLDRFKIINDSL 424 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 G ++ + + L M+ + L +L G E +L L G + + Sbjct: 425 GHQFGDRVLKLVAQRLSDCMRPVDILCRLGGDEFVLYLQGC-NAELAASVARRILQEMER 483 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + G + ++ + TL L+ Q + + +S Sbjct: 484 PFLLDGLGFSVQCSIGVAQYPADGLTLDELIRQADTAMYRVKERGRGH-FSFYQPQMSAG 542 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPL 541 ++ L + +R AL+ G + +Y QP + + +L + G+++P F+PL Sbjct: 543 LLSRMKLEHAMRQALEHGRMAVYFQPQVHIDSDRIVAAEALLRWTDPEFGVVSPGVFIPL 602 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + V+E ++ A + SVN+ L Q R+ L + Y Sbjct: 603 AEESGYIVTLGAWVMEQAVQEAARWQQQGMPIKVSVNVSALEFRQSGFVERVTELLRSYG 662 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++PQ + LE+TE +A+ + Q+ G + IDDFGTGY+N LK+L IK Sbjct: 663 LTPQLLELELTESILLQDAQDMALRVCQIADLGVGMVIDDFGTGYSNLAYLKKLPISKIK 722 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+ + ++ D IV +I L A + +VAE VET +Q +H++ Y QG+L Sbjct: 723 IDQSFVRGLPSDEGDQAIVGAIISLGLALGVEIVAEGVETHEQLTAIHRMQGHYFQGFLC 782 Query: 722 GRPQPLA 728 P Sbjct: 783 APGLPRE 789 >UniRef50_A7BRN3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BRN3_9GAMM Length = 581 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 104/556 (18%), Positives = 197/556 (35%), Gaps = 43/556 (7%) Query: 211 EKRAFTLSWLA----ALSVLLLLLCTPYENDFIAGYLVP----VFFIIFTLGVGKLRYPF 262 + +L + T I V T K + Sbjct: 7 QAIFDKAFEFMVLIKPDGILQNINQTTLTFLGIQRETVEGSYFWTLPWATPCEEKTQGQL 66 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLN 319 + + + L F L + + ++++ R L Sbjct: 67 KMAIASAGQGNFAHCEVKIQKHNGQLTILDFSLTPVKNVHGKTIWILAEGRDLSEHRVLE 126 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPE---------QEAGKSFCCLRIDNLEFMSRHYGLM 370 +R L D LT LPN + + Q+ + L +D + + G Sbjct: 127 QRLTDMNLHDQLTGLPNRQLFMDYLDKALMRTKQHQKTTFAVLFLDLDRFKVTNISLGHD 186 Query: 371 MRVHCIRSICRTLLPLMQ--------------ENEKLYQLPGSELLLVLSGPETEGRLQH 416 M + + + L + + L + G E L++L Sbjct: 187 MGDWLLMEVAQRLQNCLNNFRGKSFCFTKTFASKDILARAGGDEFLILLENISDITEANR 246 Query: 417 MV---NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + N + ++ + + + +Q+ LL ++ A Sbjct: 247 LAVTINKVLAKPFLIDRYKIMTSASIGI-VYRTSQQEGMELLRDADAAMYRAKALGK-SG 304 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDG 530 + + ++ + + A+ + +L+ QP + + G + ++ + Sbjct: 305 YAIFSPGMREEAISRLQIEMDLHQAIVNKNFVLFYQPQTELYSNQLVGIESLIRFHHPEN 364 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNI 589 G++ P +FLP++ + +L++ + L T R +VNL P KN+ Sbjct: 365 GLILPMEFLPVLEDTGIIIPIGEWILQTACQQLKTWLEAGLLIERVAVNLSPYQFRSKNL 424 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 R+ + I+P+++ LEITE + +S++ ++ G R+ IDDFG GYA+ Sbjct: 425 LKRVADALENSGIAPESLELEITESLLLKDIDSAIKTLKSFKDMGIRVIIDDFGMGYASL 484 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 + +KR AD IKID F+ I+++ DA I + D+A A L+VVAE VET +Q+ L Sbjct: 485 DYIKRFPADGIKIDNSFINGIISSPEDATITVATIDMAHALGLTVVAEGVETVEQRDFLR 544 Query: 710 KLGVQYLQGYLIGRPQ 725 G QG P Sbjct: 545 DHGCDLAQGLFYAAPM 560 >UniRef50_Q8DHG0 Tlr1999 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DHG0_THEEB Length = 790 Score = 601 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 101/439 (23%), Positives = 180/439 (41%), Gaps = 22/439 (5%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE---------QEAGKSFCCLRIDNL 360 R + + + QA D LT LPN E + + CL +D Sbjct: 343 REIQERKEVEAQLLYQARHDHLTHLPNRWLFEDQVRLSLNHAAAHSDFHYAVLCLDLDRF 402 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + +++ + L + + + +L E ++L+ + + Q + Sbjct: 403 KTLNDSLGHAIGDLLLQAFAKRLTRCVSPQDVVARLGSDEFAVLLNDIQGIEQAQAIAQR 462 Query: 421 L---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L + ++ L D + ++ + LL + + H +D Sbjct: 463 LRERLNHPFEIDHYTLYTTVSIGLVMGDAHYKSTEELLRDADMAMYYAKSKGHNR-IDIF 521 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMT 534 + M+ Q ++ L +R A+DQGD LY QPI N G++ ++ + +++ Sbjct: 522 DPMMLQQVRDRLHLEVELRQAIDQGDFALYYQPIINLRSQSPRGFEALVRWQ-KEDTLIS 580 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-----FSVNLMPLTLLQKNI 589 P F+P+ + L VL S + L R S+NL + Sbjct: 581 PTVFIPVAEETGLIFELSRWVLRSACEQLQQWQKRYPKLRSLGFTVSINLSANQFSLPTL 640 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I + + +H++ Q + +EITE + +S+ + +L G RI IDDFGTGY++ Sbjct: 641 VAEIEQALEHHHLAGQFLKIEITESTLMHHLDSACEILTKLKAMGVRINIDDFGTGYSSL 700 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+ L D IKID F+ + + D +VR+I LA+ L +AE +E+ Q LL Sbjct: 701 SYLRNLPLDGIKIDRSFISQMDRSQEDLELVRTILVLARNLHLDCIAEGIESTTQLQLLR 760 Query: 710 KLGVQYLQGYLIGRPQPLA 728 L + QGYL P Sbjct: 761 SLRCPFGQGYLFAPPLTAD 779 >UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UAD7_METS4 Length = 1034 Score = 601 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 112/614 (18%), Positives = 213/614 (34%), Gaps = 36/614 (5%) Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 L G + + T G+ I T D+ +L A+ + + Sbjct: 409 RLLPGGRWVLITERRTATGETVGIRT--DITALKAALEDLAAANARAGQAMAEVQAQNTA 466 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP--------------YENDFIAGYLVP 245 + + + +L+ G + Sbjct: 467 LLERDRSLRTQNRLFDAALGNMSHGLLMADAAGRLIVANRRLAELLGTAPETLAPGESME 526 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 V F R + + F + +L+ + Sbjct: 527 VIFAEIGARCSLGRRALARMRALQRDIATREGAGTFKISGQDGRTLSITQRPMAD--GGS 584 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK------SFCCLRIDN 359 + + + R A DPLT LPN + + + L +D Sbjct: 585 VAIYEDVTEQQQAEDRIRFLAQHDPLTRLPNRVLFRERLDAMMRADAPDATALLYLDLDA 644 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + ++ L + E + +L G E + E E Q + Sbjct: 645 FKNVNDTLGHPVGDALLAAVGARLGACVGEGGVVARLGGDEFAVAC--AEGEAAAQALAT 702 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + ++ + +G LL ++ LA Sbjct: 703 RIIAQLSAPYALAGRTVQVGASVGIAVSGPEARDADTLLRHADMALYEAKGRGRGLA-CV 761 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 E+ ++ + +++ L + + A+ G L+L QP+ + G++ ++ G + Sbjct: 762 FEKSIAARLHERLALQSDLAEAVPGGQLVLAYQPVFDLAGGRVSGFEALVRWNHPVRGFV 821 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 +P +F+P+ Q VL+ + A P G R +VNL P+ L ++I RI Sbjct: 822 SPAQFIPIAEQTGQIEAIGAFVLDRACRDAAALP---PGIRVAVNLSPVQLRAEDIVERI 878 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++P + LEITE ++E + +E++ G RI +DDFGTGY++ L+ Sbjct: 879 ATALAESGLAPARLELEITETALMEDSERMVQLLERIRALGVRIVLDDFGTGYSSLSYLR 938 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 IKID FV+++ T IV +I LA ++ AE +ET + K+G Sbjct: 939 TFPFHKIKIDQSFVREMTTRANSLAIVSAIVGLADELGMATTAEGIETADHLDFVRKVGC 998 Query: 714 QYLQGYLIGRPQPL 727 + QGY +G+P+P+ Sbjct: 999 REAQGYFLGKPKPI 1012 >UniRef50_B8FTB0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfitobacterium hafniense RepID=B8FTB0_DESHD Length = 981 Score = 601 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 89/565 (15%), Positives = 192/565 (33%), Gaps = 32/565 (5%) Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL----LLLLCTPYE-NDFIAGYLVPVFF 248 + ++ + A ++ + + + N + GY Sbjct: 410 RQQFDELLSNQRQLKETQELQELVLEAAIDAIWDWDMIRDIRVYHSKNSSLLGYKGDEIR 469 Query: 249 IIFTLGVGKLRYPFLNLTWAV-----STLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + + + + L S Sbjct: 470 SVEHWNALMHPDDKAEFQKKLNQHLFEKTARYSCDYRIKDKDGEYKWIRAFGKALYDQSG 529 Query: 304 ---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSF 352 ++ R + A D LT LPN +++ EQ Sbjct: 530 NPYRMVGSHRDITDIKEKEMHIKYLAYHDFLTGLPNRAQIQEIIKSEILKAEEQGTLLGV 589 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L IDN + ++ +G + +I R L ++ +N + +L G E L+++ + + Sbjct: 590 LFLDIDNFKAINDSFGHPTGDQLLITISRHLTQIL-DNHVVARLAGDEFLILIRDIQEKE 648 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + + + + E+ + LL ++ Sbjct: 649 QAIDYAERIMKLFETALVIYKQYCYISTSIGITFYPQDGESYESLLINADTAMHKAKELG 708 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 + ++ + N +R A++ + +L+ QP + G + ++ Sbjct: 709 K-RNYVVFNMEMKRAVVEKAEIQNNLRKAIEFEEFVLHYQPQVEPHTGKVLGLEALIRWE 767 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL 585 + ++ P+KF+ + + L V+ + +L + SVN+ L Sbjct: 768 -KEHKLIPPNKFIGVAEETGLIVPIGDWVVATACAFLKKLHDLGYRELTMSVNISARQLQ 826 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE-SSMYNIEQLHKFGFRIAIDDFGT 644 + +++++ + + P + LEITE + + +L + +I++DDFG Sbjct: 827 EDRFVEKVLKVLRDNDLDPSKLELEITETMLIEFLDAKISNVLARLIENDIKISLDDFGL 886 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ +K+L +K+D F+ DI + I I +A L VVAE VE +Q Sbjct: 887 GYSSLNYIKQLPISTLKVDKSFIDDIQSTPESKNITGLIVIMAHQLGLKVVAEGVEKPEQ 946 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L K +QGYL +P P + Sbjct: 947 REYLIKYDCDAIQGYLASKPLPEEE 971 >UniRef50_A8FVX9 Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVX9_SHESH Length = 817 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 94/437 (21%), Positives = 169/437 (38%), Gaps = 26/437 (5%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYG 368 N + A DPLT LPN + + + +DN + ++ G Sbjct: 366 KSNEKIRELAFNDPLTGLPNRFMFTKHLNLSLESAKCDRGQLAVMFIDLDNFKHINDSLG 425 Query: 369 LMMRVHCIRSICRTLLPLMQ---------ENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + I L ++ +++ + +L G E + L + + + Sbjct: 426 HQSGDQLLHEIGDRLHRNLRSKDFCEHFSDSDMVARLGGDEFTVFLGELPSINIAEKVAK 485 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + S+ I + + + N T Q L+ + Sbjct: 486 RILEIISQPILLSGKSYYISASIGIACYPQNGVTTQELIKNADIAMYHAKKKGKG-GYQH 544 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 + +S Q + ++ + A++ LY QPI + + ++ + G + Sbjct: 545 FSDNLSRQNDEFSVIEQKMHEAVENERFELYFQPIVDSNTHRIVSLEALIRWYDVEFGFI 604 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGR 592 PDKF+PL + L V+ + L + ++N+ + L A Sbjct: 605 PPDKFIPLAEKNGLITVIGDWVIREACRQLKIWQDSGIVDIQLAINVSAIQLNNPKFAQE 664 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + K I P + +E+TE + + +E L G R+A+DDFGTGY++ L Sbjct: 665 LYQTIKNSGIIPGTLYIELTETTIINGEQEIFVTLEWLRSKGIRVALDDFGTGYSSLSYL 724 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + L DI+KID F++DI + + +I+ ++ +A A VVAE VE + A L K G Sbjct: 725 RNLPIDILKIDQSFIRDI-NDKNNNVILSAVIVMAHALGFKVVAEGVEERGHLAFLVKEG 783 Query: 713 VQYLQGYLIGRPQPLAD 729 LQGY+ RPQ D Sbjct: 784 CDLLQGYMFSRPQTADD 800 >UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBN5_METSD Length = 782 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 125/759 (16%), Positives = 253/759 (33%), Gaps = 52/759 (6%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV--VPVLCGMFCTNLW 77 L + + ++ + I ++P L L W + Sbjct: 11 LMMSGSAKGVLFGAVTVVMLAIIGSFFVPQP-WLPWLDNLHWTVSSGASFILTWIGYRQA 69 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT-------------SRYVWQR 124 + +LG ++ V C ++ +G + Sbjct: 70 YPEQREPRRWFLLGIGSYFVGQLCWDIQSAIGWNPFPAPADFFYLMLGPCCILGLLSALK 129 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFY 184 L + + L I ++ L+ +L Sbjct: 130 LHLSHAKLTAAKLDMAVMTIAVIGLILLIYLGRQSDSNALQLLVLVFYPAGLLSAACFAL 189 Query: 185 YL---TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 L R+ + + +L + + + + + LL + + + G Sbjct: 190 LLVPFLRLRLQWGWLLLLGGLALEGGIWMQWNLNVIDQVNIDGSLLNHVFSASDLLLGLG 249 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS--------LAF 293 + + ++ ++ L ++ + T + L+ Sbjct: 250 AMHWMATSSSNHTYIRICQGIQRAIPLMAMLIAISTIYFMMMDTTTPIAKSIALGSCLSI 309 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNR---RWHLQALTDPLTLLPNFRALEQAP------ 344 I ++ S+ L R+ + + R+ A D LT LPN + Sbjct: 310 IALAMVRQSILLAESERLLTAEQLIEEGQMRYQHLAHHDILTGLPNRLLFQDRLTHALAL 369 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + ID+ + ++ G ++ + +I L ++E + +L G E + Sbjct: 370 SARNNNRVGMLFIDIDHFKNINDSLGHVIGDELLVAIVERLKLRIREQDTFARLGGDEFV 429 Query: 403 LVLSGPETEGRLQHMVNILNSR---QIHWNNT-GLDMGYGAAWGRFDGNQETLQPLLGQL 458 L++ + + + L H + + + + + L+ Sbjct: 430 LLIEQLQNASEAATIASNLLEALKTPFHLSGNCEVVISASIGISVCPEDTQDATQLIRNA 489 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR----NK 514 ++ E ++ + ++++ + +R A+ +L+ QPI + Sbjct: 490 DSAMYRAKDTGRNR-YQFYTEELTQRAQERLMTESRLRQAIRDKAFVLHYQPIYTKGEDG 548 Query: 515 ---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + ++ + DG ++ PD F+P + L VL+ LA Sbjct: 549 GAPSIFSCECLIRWQQDDGSLIYPDLFIPCAEETGLIIPIGEWVLDHACAQLAEWDARLP 608 Query: 572 G--PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ N + + KR+ I+P +I+EITE + ++ +E Sbjct: 609 DNTLSMAVNISARHFCDANFVMTVHEVLKRHAIAPARLIIEITENAVMDRMDIAIPTLET 668 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G RIA+DDFGTG+++ +LK L +KID FVKDI +T D + SI +A+ Sbjct: 669 LVRTGVRIALDDFGTGHSSLAKLKTLPIHALKIDREFVKDIPDSTDDMQLAASIIRMAQG 728 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VAE VETQ+Q L + G QGYL+ RP Sbjct: 729 LHLQTVAEGVETQEQYDFLAQAGCDKFQGYLLSRPVTAE 767 >UniRef50_B5ZD56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZD56_GLUDA Length = 710 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 112/675 (16%), Positives = 222/675 (32%), Gaps = 26/675 (3%) Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 F L +ML + ++ Q G ++ L+ Sbjct: 27 GERIFELFRDDPELMLVAVVDEGGAPIGLVERQAFFAKVSGQFGHALFAGRPVALLMDDR 86 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS-- 192 + + + F + V L T + + + + + Sbjct: 87 PVIVDAAVSSTDFTSMTITAQSSDVLRGYIVVAGGRYLGTGTALDLINASHSNAVASAAN 146 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL------LLCTPYENDFIAGYLVPV 246 H R+ L + T+ ++++ L+ + + G Sbjct: 147 LHETAEELRKANRKILRDKLFMDTIVENIPSALVVRSVRDDRLVLINRAAELMTGRERSE 206 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA---FILAVLISFSV 303 L T ++A +A + Sbjct: 207 LVEHTAADAFTETEIGHALVHPEGTRREGVSESLLRNRAGDMRAVATRYVTIADERGDAR 266 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----QEAGKSFCCLRIDN 359 L + ++ A DPLT L N + C+ +D Sbjct: 267 WELCVADDVTERRQARQQVERLAHYDPLTGLANRALFGARLDGVCVAGHEAILLCIDLDY 326 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ YG +R + L + ++ + +L G E ++ + L H Sbjct: 327 FKTVNDLYGHAAGDALLRLVADRLRACSRPDDLIARLGGDEFAIIWPNVPEKEELAHRAG 386 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + SR + + +G + + + L ++ A S Sbjct: 387 EIVETISRPYVIDGQHVAIGASIGSASYPADAGSSDLLRQHADIALYKAKALGRN-CFHS 445 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIM 533 + +S + + L + +R A+ + L+ QP+ + + + ++ G++ Sbjct: 446 FDAGLSYEMRNKARLGDELRAAIGSSQICLHFQPLYTMPDNQIAACEALVRWNHPVRGMI 505 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 PD+F+ L + L VL + + P + +VN+ P+ + Sbjct: 506 PPDQFIGLAEENGLIHELGEWVLRAACREAVCWP---PHVKVAVNVSPVQFRNSRFMAIV 562 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + P + +EITE N+ + + QL G + +DDFGTGY+ L+ Sbjct: 563 QSALMEAGLVPHRLEVEITENIFVQNSAVNRDILRQLADMGCSVVLDDFGTGYSALSYLR 622 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 IKID FVK++ + I+++I LA++ + AE VETQ+Q A LH +G Sbjct: 623 LFSFQKIKIDRSFVKELPE-KSASGIIQAIVSLAQSMDIPTTAEGVETQEQWARLHAMGC 681 Query: 714 QYLQGYLIGRPQPLA 728 QG+L+GRP+P+A Sbjct: 682 SEAQGFLLGRPEPVA 696 >UniRef50_B1XWM7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWM7_LEPCP Length = 751 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 114/719 (15%), Positives = 217/719 (30%), Gaps = 69/719 (9%) Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 +V +L G+ L + L R+ + R Sbjct: 2 ATALVALLIGLVDPLLHRIEFISYDMLMELPGVLLRGAGDA-----------RHPPSGRL 50 Query: 121 VWQRLFWLG---LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 RL + + + + L P + + +V L+L L Sbjct: 51 DPARLIQPLNESICHAVNLLPLLLLALLQQCRPRRFHVHGLWLLPLPMLVTGLALALWQL 110 Query: 178 IYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CT 232 + + + R + +A SV+ + Sbjct: 111 WIPTVGLSIGLVTGWLLTRNQELRSARMALQHERGQADATLQAITDSVITVDTGARVQYL 170 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ-------NFLQGV 285 + +AG+ + + + P CL Sbjct: 171 NPSAERLAGHSLAEARGHAVGTLFQWDEPDAQTLEQALAECLQERRVVQVGLALRLKAPQ 230 Query: 286 ETEYSLAFILAVL--------------------------ISFSVCLLYMVRIYHRSEWLN 319 + I + + + + + Sbjct: 231 GE-RQVQIIASPVFERQIESGLSGDRLDRPLRRAPADHDRDRVTGAVLALSDVTEALRAA 289 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMM 371 + +A D LT LPN L + + + +D + ++ G Sbjct: 290 DKLQHEATHDALTGLPNRALLSDRLQHAVLGAQAGQRSVAVLFIDLDRFKRINDSLGHRH 349 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW 428 ++ + L + ++ L + G E +++L + + + + Sbjct: 350 GDAVLKEVASRLQQCCRAHDTLARWGGDEFVVLLEDVPSRDAVAARAAQMIDSVTLEFAI 409 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + G + + LL + + + + T + Sbjct: 410 DQVEVACGCSIGIAMAPQDGVAVDALLAMADTAMYRGKSRGGKR-FEFYASEMPSWTREW 468 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L +R L+ +L+ QP N + G + +L + DG + P +FLP+ + Sbjct: 469 LALETRLRHGLETQSFVLHYQPQVNLKTGQLVGLEALLRWRQPDGELWLPGRFLPVTEET 528 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L V+ + LA SVN+ L + + + I Sbjct: 529 GLILPIGEWVIREATQQLARWRDQGLPLVPVSVNVSTRQCLDRRLVQVVAEALLCSGIDA 588 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE A ++ + +L G ++A+DDFGTG+++ LK Q D IKID Sbjct: 589 GLLKLEVTESTAMADLGHLRGLLVELRALGVQVAMDDFGTGFSSLSHLKHFQIDQIKIDP 648 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV+DI + A IVR+ LA L VVAE VE+++Q A L QG+L R Sbjct: 649 SFVRDISRDANGAAIVRATIALAHGLGLPVVAEGVESEEQMAFLSAHHCDIAQGFLYAR 707 >UniRef50_A9KPL6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KPL6_CLOPH Length = 547 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 91/429 (21%), Positives = 175/429 (40%), Gaps = 15/429 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP-------EQEAGKSFCCLRIDNLEFMSRH 366 + A +D LT LPN A + Q + IDN + ++ Sbjct: 106 ELKKSKEIVKRMAYSDYLTSLPNRLAFVELLDGIMATIRQNEIVGILDIDIDNFKDINDT 165 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILNS 423 G + + L L++EN+ L ++ G E +++ L+ + + + Sbjct: 166 LGHSYGDEMLIDVMHRLEELIKENDYLSRIGGDEFAILIQNLTDLSELEERILEVQQIFA 225 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + +T Q L+ ++ ++ ++ ++ Sbjct: 226 TPFRVATREFFITVSIGVAIAPKDGKTTQSLVKNMNSAMYEAKERGKN-NFCYYDDSINL 284 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLP 540 + +++ + + +R A+++ ++Y QP N G++ + + GI+ P F+P Sbjct: 285 KMMQKLEMQSELRKAIEENQFVVYYQPQINLVNDRVVGFEALARWQHPEKGIIAPIDFIP 344 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + ++L L + + +VNL K+ + + + Sbjct: 345 LAEDNGMIVAIGKKMLYESCMQLRSLQESGYRDIVIAVNLSARQFKDKDFLPMVYEILEE 404 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + + EITE A + E S+ I +L + G A+DDFGTGY++ LKRL + Sbjct: 405 TKADARGLEFEITETVALDDLEFSISTISKLKEIGITFALDDFGTGYSSLNYLKRLPVNN 464 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F+ I+ N D IV ++ DLAK ++ V+AE VE +Q+ L ++ QGY Sbjct: 465 LKIDKSFLDTILENNSDQKIVHTMIDLAKHLNIEVIAEGVELSEQEKFLKEINCGKAQGY 524 Query: 720 LIGRPQPLA 728 G+P P Sbjct: 525 YYGKPVPKE 533 >UniRef50_C7RKP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKP6_9PROT Length = 640 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 108/599 (18%), Positives = 197/599 (32%), Gaps = 42/599 (7%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + L + R A RR + +AA + Sbjct: 4 SVTFLSAPRVGQAPRLVSRARKTAERRQADQALRRSE-ALKASILASLACGIVAADPQGV 62 Query: 228 LLLCTPYENDFIAGYLVPVFF--------------------IIFTLGVGKLRYPFLNLTW 267 + C + I GY L Sbjct: 63 ITAC-NPCAEAILGYRADELIGKLTPVIFRDSGDPAGPNDRPSQPPHRTGDAGLDAQLAR 121 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHL 324 A S + L+ + ++ + ++ + R + Sbjct: 122 AGSGSTAGERDTTCLRKDGQQIAVRLATIPMHDPDGLVSGYVHTLVDITRHKEAEDGIQR 181 Query: 325 QALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 DPLT L N L+ Q + L +D + ++ G + + Sbjct: 182 LVHADPLTGLANRILLDARVRQDLSRAHRAREPLALIFLDVDRFKNVNDTLGHRIGDELL 241 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGL 433 + L ++++ + L +L G E +LVL ++ L + L Sbjct: 242 IQVAARLDSIVRDEDTLCRLGGDEFVLVLPN-TDADGAANVAEKLLKITAPSYRLEQHVL 300 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 A + + +++ L ++ A A + + + + N Sbjct: 301 TCTVSAGIAMYPTDGDSVASLSTSADAAMYRAKARGGN-AYSFFTAEMQERLARTRQIRN 359 Query: 494 TIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R A+ G+L L QP G + +L G+++P +F+P+ LS Sbjct: 360 ELRRAIANGELHLQYQPRFAMAARRPVGAEALLRWQHRQLGMVSPLEFVPIAEGSGLSLA 419 Query: 551 FDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + ++ + R +VNL Q N++ R+ R+ + P + L Sbjct: 420 LGEWVLRTAIRHMRGWQNRSLPPMRVAVNLSAAQFRQTNLSERVARILDEEGLPPPFLEL 479 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE N +++ + +L G +++D+FGTG ++ L+RL+ D +KID V Sbjct: 480 ELTENLVMDNPLAAIATVNKLRTLGVGVSLDNFGTGRSSMSDLRRLRVDRLKIDRSLVTG 539 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + T+ A IV + LA L VA VE+ Q A L G QG L+G P Sbjct: 540 LPTDPDAAAIVAATLSLAHDLGLPTVAGGVESAAQMAFLRARGCDEAQGNLLGPPVVAE 598 >UniRef50_B6JDG4 Ggdef domain n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JDG4_OLICO Length = 763 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 112/724 (15%), Positives = 217/724 (29%), Gaps = 45/724 (6%) Query: 28 SRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM----FCTNLWNFHLSF 83 + IS A + A P +L + GW V + N Sbjct: 34 AGTISAAAAAAVTAWKAAQWPFLACSLLLALIGWARVRDMAAYSRQKPSADNYVETRRWE 93 Query: 84 LQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLV 143 + + G+ ++ C + + ++ L + + Sbjct: 94 KRYILGSGAFVAILSFWCFLTFALTSDPAVHLISFSVSLAYLVGVTGRNFSSDQLVTTQT 153 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRD 203 D F L+ F ++ + V L + Sbjct: 154 VCAGLPMTAGLIIQNDIYYAFLASLLIPFFLSLRFISTRLRKTLFDAVVASREIQLLAK- 212 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 R T + + + + + L L Sbjct: 213 ---------RFDTALNNMPHGLCMFD--ANRRLLVTNHRFIEMLGLGSNLNGNLCIRELL 261 Query: 264 NLTWAVSTLCLL-------NYNQNFLQGVETEYSLAFILAVLIS------FSVCLLYMVR 310 A + L L + + +L + + + Sbjct: 262 QHITASNQLRHLSPDEFASQFEERIASRQRQTLALEVDANKTFELTFQPMENGGHVVLSE 321 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-----EAGKSFCCLRIDNLEFMSR 365 + R A D LT LPN LE E+ + + +D + ++ Sbjct: 322 DITERQQTAERIEHLARYDALTGLPNRTHLEDEFERLTAQGMQSCALLFIDLDQFKKVND 381 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---N 422 G + + L ++ + + G E +++L + + + Sbjct: 382 TLGHPAGDALLCQVANRLRRILNTTGIVARFGGDEFVVLLPIQHSRDEAAQLAGHIIRTL 441 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S N + +G G + T + +L + A E + Sbjct: 442 SEIYDVNGHQIMVGASVGVGVMPEDGRTFEQILKCADMAMYHAKADGRG-TYSFFEHTMD 500 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + + L IR A+ + + +Y QPI + + +L + G++ P++F+ Sbjct: 501 EKAQTRRALELDIRNAMTRNEFDIYFQPIMDIKTGRTVTCEALLRWPHTERGMVPPNEFV 560 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 ++ + L VL T P +VN+ + + N++ I Sbjct: 561 SVVEEMGLITELGTWVLHKACSECTTWPK---NIGVAVNVSAIQFRRSNVSELIAECLAS 617 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 +S + +EITE N + + K G RI++DDFGTGY++ L+ Sbjct: 618 TGLSADRLEIEITESVLLENTAEIQKALNDIRKQGVRISLDDFGTGYSSLSYLREFPLSK 677 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL-GVQYLQG 718 IKID F+ I + ++ I ++ +SVV E VET +Q LL + + +QG Sbjct: 678 IKIDRSFLAGIENDPRSMKLLYGIARVSADLGMSVVVEGVETHRQLTLLLQEPSITQVQG 737 Query: 719 YLIG 722 YL Sbjct: 738 YLFS 741 >UniRef50_A1STY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STY4_PSYIN Length = 954 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 100/566 (17%), Positives = 184/566 (32%), Gaps = 36/566 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPV--FFI 249 E+R ++ + + + G V Sbjct: 371 LEARELYENALRESEERYALVANATNEGLWDWNITKNEMYFSPRFFALLGKNVDENSSLN 430 Query: 250 IFTLGVGKLRYPFLNLTWAV------STLCLLNYNQNFLQGVETEYSLAFILAVL---IS 300 + + L + L + + Sbjct: 431 TIEDWYKLIHPKDIILVKSAINDCLNGKTAHFQCEYRLLHHDGRYRWILSRGLAIWDSSG 490 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKS 351 ++ + + A D LT L N ++ + Sbjct: 491 EAIRMAASHSDISDQRDAKDKLRYDAFHDSLTGLYNRSWFVSYLQELLSGHSRNKNLNFA 550 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + + L ++E + L + G E +++L E Sbjct: 551 VLFLDLDQFKLVNDTLGHAAGDKLLIYVAERLKKCLRETDMLARFGGDEFVILLKSDENY 610 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + NN + G + + +L ++ + Sbjct: 611 RFI-QIAERIIEQLSLSFSINNNYIHTGASIGITLLETGYQDAYEMLRDADIAMYRAKLN 669 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 +E + Q KQV +R A++ +L LY QPI + G++ +L Sbjct: 670 GKN-CHIVFDEEMRSQLLKQVDTEKLLRQAIENDELTLYYQPIISLSDGRLTGFEALLRW 728 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPL 582 G ++PD F+PL + V ES L + S+N+ P+ Sbjct: 729 NNPILGNVSPDVFIPLAEANGTIIQLGQWVFESAFIQLKAWKEEFTGFDNLVLSINMSPV 788 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L K +L Y+I + +EITE ++ I K+G I +DDF Sbjct: 789 QFLDKLFLKNFPKLMDTYNIKGSEIAIEITETAIIHKKALAIKVINDFKKYGIHIHLDDF 848 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L Q D+IKID F++ + N+ + +V++I + A + AE +E Sbjct: 849 GTGYSSISHLVGFQIDLIKIDRSFIELLGVNSKEDKLVQAIINFAHNLGIKCTAEGIEEA 908 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 QQ LL Y QGY I +P P + Sbjct: 909 AQQRLLSIANCDYAQGYFIAKPAPAS 934 >UniRef50_A8VZ02 Orn/Lys/Arg decarboxylase, major region n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VZ02_9BACI Length = 778 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 111/725 (15%), Positives = 254/725 (35%), Gaps = 48/725 (6%) Query: 46 WMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILR 105 W+ V ++ I + + ++ F + ++ ++ G+ L + Sbjct: 45 WVLGSVQMTYAVILFYSIL--LVMHAFRRRIHFEIRAYTIIFILFGTGIVSGLTYGMVGS 102 Query: 106 WQLGTRWRYGLTSRYVWQR--LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAI 163 L + + +R ++W+ + I + ++ V + + + + Sbjct: 103 SMLFYVGAAYVAMLLLSKRETIYWMAMTLFIYLVIYVFWVSGILTYEFSVMDYAVSETTL 162 Query: 164 FTVVDLLSLFTAVLIYNMLFY--YLTRMIVSPHFAQILWRRDIAPSLGK----------- 210 + + F +LI++ +L + R + + Sbjct: 163 ISRMVAFIFFVGLLIFSQWMVNEFLVDKMNDLKQTHDELRLSDKQLIEQYNEILDNREEI 222 Query: 211 ---EKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFFIIFTL----GVGKL 258 E++ ++ + L+ + Sbjct: 223 KLKEEQYRSIVENTEDLIYAVTPERTLITANSSFSAFVKMEQSELIGTSLDKLKGLATLI 282 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVET-EYSLAFILAVLISFSVCLLYM-VRIYHRSE 316 NL ++ + + Q + Y + S+ ++ + Sbjct: 283 DENDRNLDHVLAMKEPIQFVQRIEKPSGRQIYHTDITPVMHADGSLTMMLIKHHDVTELV 342 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ-----EAGKSFCCLRIDNLEFMSRHYGLMM 371 + + A D LT L N E + +D+ + ++ G Sbjct: 343 HKDEQIEQLAYFDQLTGLVNRYHFEAIISEKIKDIGHQFGIIYFDLDHFKKINDTIGHFA 402 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL----QHMVNILN---SR 424 + ++ + TL ++ ++ L +L G E +VL L + + + + + Sbjct: 403 GDYLLKQVAETLQGVLPDDATLARLGGDEFAVVLDETSEGHALMRLLEEVADTIVKTARK 462 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 ++ + + A + + + L+ + ++ + + + Sbjct: 463 PVNIDGVHYYISASAGIVVYPEHGRSHDELMKNVDTAMYKAKNDGKNKCI-FFNAEIKDE 521 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 T + +LL +R A + ++ + QP+ + + G++ ++ G ++P F+P+ Sbjct: 522 TDQSILLEAHLRHAFEYDEMYVDYQPLVSGKNEHVRGFEALMRWNSNYFGPVSPAVFIPV 581 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + Q + F +L+ L + + SVN+ L L Q+ A + R+ + Sbjct: 582 LEQTGMIVEFGEWILKEALNKIHELEKVSDQSYVVSVNVSLLQLKQERFATNVKRIMDEW 641 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 ++P +V LEITE + E + + +L ++G RIA+DDFGTGY++ L++ D + Sbjct: 642 GVNPASVELEITESILADDVELIINVLSELKQYGIRIALDDFGTGYSSLSYLRKFPLDTL 701 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F + I ++ SI +A L VVAE +E +Q A L + Y QGY Sbjct: 702 KIDKSFSEGIGQQQKQLELIGSIIQMAHKIGLEVVAEGIEEPEQVAYLKRHHCDYFQGYY 761 Query: 721 IGRPQ 725 +P Sbjct: 762 FHKPL 766 >UniRef50_Q3A5U6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5U6_PELCD Length = 628 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 89/440 (20%), Positives = 174/440 (39%), Gaps = 31/440 (7%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + R H A D LT LPN ++ ++ + + +++ + ++ Sbjct: 165 RQIQGRLHRLAYFDNLTGLPNRTQFLESLNKTLAIAQRKQKQAALLFIDLNDFKRINDTL 224 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKL---------YQLPGSELLLVLSGPETEGRLQHMV 418 G M + + + L ++E++ L +L G E ++L E+E + + Sbjct: 225 GHSMGDKLLEIVAKRLAGCIRESDLLGSTCEGSKTARLGGDEFTVLLPEVESEQFVATVA 284 Query: 419 NIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL--- 472 + +R + + + F + + + L+ + Sbjct: 285 KRIFHCLTRPADLDKHQVMVTPSIGIALFPNDGKDAETLMKCADMAMYFAK----NREPE 340 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 +E ++ + K++ + +R AL + +L L QP + G + +L + Sbjct: 341 NYRFYQESMNTEALKRLAIETQLRHALQRQELSLVYQPQFDLNTGAVSGLEALLRWDNQE 400 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G + P +F+ + + + V+ + + T R SVN+ P + + Sbjct: 401 LGQIPPKEFILIAEETGIIYDLGHWVMCTACNQVKTWHNMDIELPRISVNVSPKEFIHPD 460 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + P + +EITE + E + +E+L + G +IAIDDFG GY++ Sbjct: 461 FLSNVKTALDESGLEPGGLQIEITETLLMEHYEGTAKILEELSRMGVQIAIDDFGKGYSS 520 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 RL L D +KID FV I + ++++I +A A +L V+AE VET+ Q L Sbjct: 521 LNRLHTLTIDCLKIDRSFVNGISVGFKEQSVIKAIISMASAMNLKVIAEGVETENQFTFL 580 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 Q QGY + P Sbjct: 581 KDKHCQEAQGYRLSLPLTTE 600 >UniRef50_B6AQB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Leptospirillum sp. Group II RepID=B6AQB4_9BACT Length = 878 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 90/568 (15%), Positives = 202/568 (35%), Gaps = 30/568 (5%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFT--LSWLAALSVLLLLL-----CTPYENDFIAGY 242 I + + T + + + + ++G+ Sbjct: 301 IGLLTRIAEAMSYALDDFERGQDLFLTSLVFDAVPEGIFITDVEGRITRVNEAFCRLSGF 360 Query: 243 LVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 + ++ A+ + ++ + Y + + ++ Sbjct: 361 SFGELLGREADTLTAGLEKGILCASIRDAIDQRGTVEGIFELIRKDASSYMVEATITLVE 420 Query: 300 S---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 S ++ +++ R+ A D LT L N AL + + Sbjct: 421 EPGRDSRHVVLLLKDVTAKMERERQIWRLANIDDLTGLLNRTALIERLANEMEKSRRNQG 480 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L D+ + ++ G ++ I L ++ + + +L G E ++V+S Sbjct: 481 AMALLFLDFDDFKGINDTLGHSAGDSFLKVIGHRLSGSVRPTDIVARLGGDEFVVVVS-L 539 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E++ ++ + + + + + + E+++ LL + Q+ Sbjct: 540 ESDEKILSFAQKILDILGAPVSIQSQTVQTSVSVGIATYPRDAESVEDLLRKADIAMYQA 599 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + + + ++T L +G L+ QP + + G + + Sbjct: 600 KNKGKN-TWQFFNVEMEERIRLRFEQEQMLKTGLQEGAFFLHFQPQIDVFRRRLVGVEAL 658 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 GG + P F+PL + F V++ + + + R VN+ Sbjct: 659 ARWPVPSGGTIGPASFIPLAEETGTILAFGEWVIQEAFRVIQFWSASGRPRIRVGVNVSS 718 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + + R+ + + E+TE + E++ + L + G RIAIDD Sbjct: 719 RQFWSPTFWTFLREILSRHAELTRWLTFELTETVLMRDPETAGEQLSWLKELGIRIAIDD 778 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L R D IK+ FV + + D +V++I + K+ L++V E ET Sbjct: 779 FGTGYSSLSYLSRFPVDEIKVSQEFVMRMAKSPRDLKLVKTIIQMGKSLRLNLVGEGAET 838 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +++ +L LG +QG+ + RP P+++ Sbjct: 839 EEEVRMLEGLGCHVIQGFALSRPLPVSE 866 >UniRef50_Q0AB93 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AB93_ALHEH Length = 693 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 114/615 (18%), Positives = 214/615 (34%), Gaps = 33/615 (5%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + + + + V + + L+R + L Sbjct: 76 VAADAAVRDVLNALDRAPTLHLPVVDERGECIGVTSHTCLFSVLLSREQALRRERESLIL 135 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTL 253 + + A + + +++ ++ GY Sbjct: 136 QLQDEL-HAHEIASAVFNATSEGIMVTDAEQRIISVNRAFVNTTGYEPREALGQSPSILS 194 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVR 310 + ++ + + Y + + + + + Sbjct: 195 SGRHSADFYADMWEQLREHGTWEGEIWNRRKNGEVYPEWLHVDAIRDEAGRITNYVGVFS 254 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 + + L+ R H A D LT LPN Q S L +D + Sbjct: 255 DITKHKELHDRLHALANYDSLTGLPNRTLFLDRLRQIIALAEHRGFSFSLLYLGLDRFKE 314 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ Y + + + L ++E + L ++ G E ++++ G E + + L Sbjct: 315 INDTYSHTAGDQVLVEVGQRLQTCLREKDDLARMGGDEFVILVEG--EELNVHTVAQRLL 372 Query: 423 SR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 I + + + + L+ Q+ A Sbjct: 373 RTLENPILIDQEPFFVSASIGICHYPDDGADTDTLMATAQSALYQAKAAGQG-GFSLYSP 431 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + ++V L++ +R AL+ L L QP N+ G++ + + DG ++P Sbjct: 432 DAHERARQRVRLVSDLREALEHNRLELAWQPQFGLDNRRVTGFEALARWQRDDGRPISPA 491 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---RFSVNLMPLTLLQKNIAGRI 593 +F+PL Q L A+ V+++ + RF++NL P L ++ + Sbjct: 492 EFIPLAEQSGLIAQLGRWVIDTATAEAKALLQARPELEQARFALNLSPYQL-DDSLPKIL 550 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + A+ +EITE F++ E + + G R+A+DDFGTGY+N RLK Sbjct: 551 TDGLAAAGLPAGALEVEITESALFADQERVTETLNAIGSTGVRLAVDDFGTGYSNIARLK 610 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L +K+D + D+ + D IVR++ +A+A L VVAE VETQ Q L + G Sbjct: 611 LLPIHRLKLDRSLITDLEHDHSDREIVRALLAMAEALGLDVVAEGVETQAQATFLAQAGC 670 Query: 714 QYLQGYLIGRPQPLA 728 QGYL RPQPL Sbjct: 671 PQAQGYLYARPQPLE 685 >UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7J2_BACCO Length = 559 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 101/468 (21%), Positives = 184/468 (39%), Gaps = 25/468 (5%) Query: 281 FLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRW----HLQALTDPLTLLPN 336 F+ + L LA + ++ + R R Q DPLT L N Sbjct: 91 FIHHSDARRILHTSLAGMNGG-EWVIAITRDVTALLDGERMLPDARTYQL--DPLTGLWN 147 Query: 337 FRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 AL ++ + + +D ++ + G + ++ I L L Sbjct: 148 RHALLDRLNRKTAEAKKGAPHPAVLYIDLDRFKYFNDILGQHVGDEILKRIAIRLKQLPF 207 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 + ++Y+ G E +++ +G + ++ M + + + F Sbjct: 208 SDYEVYRQGGDEFIVLTAGC-SREEVKQMAEQILALFYDPFKIEGEDYFLTPSVGISLFP 266 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + E + L+ + + + +L+ +R A+++ +L Sbjct: 267 EDGEDGETLIKHADTALFKVKERGKGH-FLFYSKKMDADFHNYILMEAHLRRAIEKNELA 325 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 ++ QP + + ++ +L G + P KF+PL + L V++ + Sbjct: 326 VHYQPQVQLDTGKIKSFEALLRWRNPKFGNVPPLKFIPLAEETGLITSIGAWVIDHVCAQ 385 Query: 563 LATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 +A G R +VN+ P L +AG I R ++Y + + +EITE + Sbjct: 386 IAQWRQKGWAGFRVAVNISPKQFLDPGLAGLIGRTLEKYKLPASVLEIEITEGA-MEDKG 444 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + + L + G I++DDFGTGY++ LK+ DI+KID FV+++ + DA I + Sbjct: 445 HILKVLSSLKEMGLTISVDDFGTGYSSLNYLKKFPVDILKIDQSFVRELENSQKDAAITK 504 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I LA L VVAE VE Q Q L Q QGY RP P + Sbjct: 505 TIIHLAHQLGLEVVAEGVEEQGQVEFLQSARCQKAQGYFFSRPVPAEE 552 >UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=cellular organisms RepID=A9BW89_DELAS Length = 947 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 99/431 (22%), Positives = 172/431 (39%), Gaps = 17/431 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 E RR A D LT LPN L EQ + + +D + ++ Sbjct: 493 EREQARRRIRQLAFYDGLTTLPNRSLLLAQAEQALSVASHEGHELAVVFIDLDRFKQVND 552 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---N 422 G + S+ + + ++ + +L G E ++VL + ++ L Sbjct: 553 SLGHPAGDRLLCSVAQRIQAELRTGDIAGRLSGDEFVIVLPHCGGAQAAE-VIERLQSAL 611 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 ++ L F + ++ LL + Q+ + L ++ Sbjct: 612 GEPCMIDDVSLASTASCGIAVFPADGRDMETLLHRADMAMYQAKSGGRGL-YSFFSPEMN 670 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 ++++L +R AL G L L+ QP + G + + + G ++P +F+ Sbjct: 671 RLAQERLVLETALRDALRSGGLRLHYQPQLDLKDGRLYGVEALARWSHAEFGEISPARFI 730 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L L + L SVNL P + ++ I + Sbjct: 731 PLAEECGLIGELGTWALREACRQLGEWRSRGIDVPAMSVNLSPTSFHNLDLPRMIADTLE 790 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + PQ + LEITE +M ++ +H G R+++DDFGTGY++ L+RL Sbjct: 791 HNALKPQDLTLEITESLLLDTNPGTMRTLQAVHSQGVRLSMDDFGTGYSSLSYLRRLPVS 850 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +K+D FV D+ + + +I + ++ L+VVAE VET Q +L + G QG Sbjct: 851 ELKLDRSFVADLENDEAAQALSNAILGIGRSLHLTVVAEGVETAAQNTILREQGYPVAQG 910 Query: 719 YLIGRPQPLAD 729 YL RP P AD Sbjct: 911 YLFSRPLPAAD 921 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 13/182 (7%), Positives = 33/182 (18%), Gaps = 20/182 (10%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 + + + I + A + + + A Sbjct: 176 WLEATYAPVLDTQGALSHVLCIATDITARVQADRRRQEHLRRLSLVADATDAAV-VIADG 234 Query: 225 VLLLLLCTPYENDFIAGYLVPVF---FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF 281 + + G+ I L + + + Sbjct: 235 NW-TISYVNAGFTRMFGWSSEEVVGRAPIALLVPHASPEFTAAYRAELDAGKPVYREEIL 293 Query: 282 LQGVETEYSLAFILAVLISFSVCL-----------LYMVRIYHRSEWLNRRWHLQALTDP 330 + Y ++ ++ L + + L Q P Sbjct: 294 VGKDGERYWVSAQANPVMGPDGRLHTTVTVITDITEAKMHEVLQRRALEAMARDQ----P 349 Query: 331 LT 332 LT Sbjct: 350 LT 351 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 10/135 (7%), Positives = 25/135 (18%), Gaps = 14/135 (10%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL----VPVFFIIFTLGVGKLR 259 +A L+ L+ + I GY + Sbjct: 89 QQALWSTLDKAMALAEFTPEGRLM---RANANYEAILGYPTSGAEGLLHSDLCTQAHADP 145 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSE 316 + ++ + + L A ++ +L + Sbjct: 146 DAYGRWRQRWGAGETISRVGEHRRRDGSTCWLEATYAPVLDTQGALSHVLCIATDITARV 205 Query: 317 WL----NRRWHLQAL 327 +L Sbjct: 206 QADRRRQEHLRRLSL 220 >UniRef50_Q07HD2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Alphaproteobacteria RepID=Q07HD2_RHOP5 Length = 1223 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 105/559 (18%), Positives = 202/559 (36%), Gaps = 24/559 (4%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---YENDFIAGYLVP 245 I + + + + + +L F Y + Sbjct: 653 DITDRIRVKTELAQQAERLARTNMQFDAALTNMSQGLAMLDSQGRLVLTNKRFQEMYGLD 712 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA----FILAVLISF 301 + L ++ L A ++ Y + V++ L + + Sbjct: 713 EEQLKPGTPAEDLVERYVPLFAASKSMVKG-YLARLSKDVDSVIPLLDGRIIRIRRAQTS 771 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----APEQ-EAGKSFCCLR 356 + E R+ A D LT L N L + A E + S + Sbjct: 772 DGGWVATHEDITAQERSARQISYLAFHDGLTELANRAELNKQGHLALESSDRPISVLLID 831 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL-SGPETEGRLQ 415 +D + ++ +G ++ + + L + + ++ G E ++ P+ Sbjct: 832 LDRFKAVNDTFGHAAGDRLLQLVAIRMRALAGPKDLVARVGGDEFAILQAPCPDQREAAI 891 Query: 416 HMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + +G L+ Q + + Sbjct: 892 ALASRTIEVLRQPFDLGGKQASIGASIGIAVRSPQTVRFDDLIHQADLALYEIKSGGRND 951 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 L E+ + + +++ L N +R A+ G + L+ QPI + G + ++ Sbjct: 952 CL-LYEDSLGARAHERLELENDLREAIAGGQMELHYQPIVRLTDLRVCGMEALVRWRHPV 1010 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G+++PD F+PL + L + V+ A+ P + +VN+ P + + + Sbjct: 1011 RGLLSPDLFIPLAEETGLIVQLGEFVVNQACHDAASWPD---HVKVAVNISPTHIKGRGL 1067 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 G + ++ + + LE+TE E + + QL G +A+DDFGTG+++ Sbjct: 1068 LGTVTLALLNSQLATERLELEVTETVLMERDEDMLAELHQLRALGISVALDDFGTGFSSL 1127 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L+ D IKID FV +I + A IV ++T LA+ + AE VET+QQ +L Sbjct: 1128 SHLRMFSFDKIKIDRSFVAEITERSDSAAIVCAVTGLARTLDIVTTAEGVETEQQMQILR 1187 Query: 710 KLGVQYLQGYLIGRPQPLA 728 G LQGYL GRP+P Sbjct: 1188 AAGCTQLQGYLFGRPKPAD 1206 Score = 68.8 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 8/130 (6%), Positives = 29/130 (22%), Gaps = 6/130 (4%) Query: 201 RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF---TLGVGK 257 + + +A V +L + I+GY Sbjct: 30 QLAADELGHLVAALDQTAIVAITDVKGRILHANDKFCEISGYSRDELLGQDHRLLKSGVH 89 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHR 314 F ++ ++ + + Y + + + ++ + + Sbjct: 90 PDELFRDMYRVIAGGGVWHGEFCNRAKSGRLYWVDTTIVPRLDGRGKVVGYTSIRVDITQ 149 Query: 315 SEWLNRRWHL 324 + + Sbjct: 150 RKTMEEALRR 159 Score = 50.0 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 9/178 (5%), Positives = 29/178 (16%), Gaps = 17/178 (9%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA-F 215 + ++ V + + + + I + RR Sbjct: 114 RAKSGRLYWVDTTIVPRLDGRGKVVGYTSIRVDITQRKTMEEALRRSEQLLRSTMTALGD 173 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV--------GKLRYPFLNLTW 267 L ++ + I G G + Sbjct: 174 GLVIQDRDGRIVA---SNPAAARILGLGADPCGSTALFDPCWVAIKEDGHDFPAVEHPAQ 230 Query: 268 AVSTLCLLNYNQN--FLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNR 320 + + ++ ++ C ++ Sbjct: 231 VTLATGEPQRDVVMGLRKPDGAVSWVSINSVAILGHDDCPDSVVTSCADITAKRQAEE 288 Score = 43.8 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 10/149 (6%), Positives = 28/149 (18%), Gaps = 15/149 (10%) Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP---YENDFIAGYLVP 245 I + H A+ R + K + + + + + F Y +P Sbjct: 524 DITARHTAEQQRRDSEQQARRKSAMLEVTLAHMSQGLSMYDAYGRLMVWNDRFAELYSLP 583 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ--------NFLQGVETEYSLAFILAV 297 + + + ++ + Sbjct: 584 SELQQEGVSYKSIAKYLPQVGLLGIDQPDWYQRVAAGQTVVAQLDFDDG--RAIKIVYQP 641 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + + + QA Sbjct: 642 IPG--SGWVATHEDITDRIRVKTELAQQA 668 >UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Shewanella RepID=B1KIP0_SHEWM Length = 796 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 86/502 (17%), Positives = 192/502 (38%), Gaps = 23/502 (4%) Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 F + + + + ++ L ++ ++ T L +A + L Sbjct: 282 WFEPVNEQDIFTSAWFIAGI--SLLALPVMLGLLYLMRVNNTNLVLQTQVASVSEQQQKL 339 Query: 306 ----LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FC 353 + ++ + + + QA D LT L N Q + Sbjct: 340 TNQNVLLLEEVDKRKASENKLAYQATHDELTGLANRTHSMSRLAQSIESAQVNNTKVLVM 399 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +DN + ++ G ++ + LL ++ + + + G E L+++ + Sbjct: 400 FLDLDNFKQVNDTVGHHAGDELLKLTSKRLLNSVRNTDTVARFGGDEFLIIIPELPHQNM 459 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + + + + + +T LL + ++ Sbjct: 460 AKMLASSILTLFEQAFKIEGQEFFVSTSIGMSIYPQDGDTAATLLKKADTSLYRAKDAGR 519 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 + ++ +++ L + A+ D+ +Y QPI + + G + ++ Sbjct: 520 N-GFSFYNDSMNQDIQRKLTLNVRLHQAISLDDIEIYYQPILDLASRKIIGAEALMRWTD 578 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL-Q 586 + G+++PD+F+PL + L + VL+ A+ + ++N + Sbjct: 579 SELGVVSPDEFIPLAEKNGLIHKLGDIVLQRACSQAASWQSIT-PLKMAINFSSVQFRYS 637 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + RI+ + + + + +E+TE M + L + G ++IDDFGTGY Sbjct: 638 EQLQARIVEVLAQTGLPADKLDMEVTESLLIDQESGLMTMLAYLKQLGIEMSIDDFGTGY 697 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 + L++ +KID F+ + ++ D +V +I +AK+ + VVAE +E +QQ Sbjct: 698 SALSYLQKFSFSKLKIDRAFINKMASSKSDKALVTAILAMAKSLEMKVVAEGIEDEQQAQ 757 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L G ++ QGYL RP Sbjct: 758 FLQSHGCEFGQGYLFSRPVTAE 779 >UniRef50_A7K1J3 Sensory box/GGDEF family protein ScrC (Involved in swarmer cell regulation) n=13 Tax=Vibrionaceae RepID=A7K1J3_VIBSE Length = 776 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 87/433 (20%), Positives = 168/433 (38%), Gaps = 17/433 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 R + + QA D LT LPN + + + +D+ + + Sbjct: 335 IERRKASEKELAFQAKYDTLTNLPNRSYGSERLALELIRASRSGSKVLVMFIDLDHFKQI 394 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + ++ + L + ++ + L ++ G E LLV+ + + + + S Sbjct: 395 NDSMGHFVGDEILKLSAQRLHQVARKTDLLARIGGDEFLLVIPDLPDNDTAKRVASSVLS 454 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 WNN + F + + + LL + A Sbjct: 455 AFNDPFVWNNHEFFLSSSVGMSVFPDDGDNAEQLLACADMAMYRVKQDGRD-AFCFYNHN 513 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDK 537 ++ + + L N +R A+ L LY QPI + + G + ++ G + P++ Sbjct: 514 MNQDLQRYLDLENRLRNAISSQLLELYYQPIIELSSGKIVGAEALMRWNDEKYGFVNPEE 573 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ-KNIAGRIIRL 596 F+ + + L + ++ + A SVN + + I + Sbjct: 574 FISIAEKNGLIHQIGEFAIQQACRQAAQWQS-LTPLFVSVNFSSVQFRYCDRLLAFIKKS 632 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + +E+TE F++ + + L G ++ IDDFGTGY+ L++ Sbjct: 633 LEESGLPSDKFDIEVTESLLFNHDSELLDMLNNLRALGTKLTIDDFGTGYSALSYLQKFP 692 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F++++ N D +V I +AKA +L +VAE +E Q+ L L ++ Sbjct: 693 FDRLKIDRSFMQNMFENDSDRELVNVIIAMAKALNLKIVAEGIEEQRHVDYLKGLNCEFG 752 Query: 717 QGYLIGRPQPLAD 729 QG+ RP P D Sbjct: 753 QGFHYSRPLPAKD 765 >UniRef50_A4A7X6 Sensory box/GGDEF family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A7X6_9GAMM Length = 943 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 102/592 (17%), Positives = 205/592 (34%), Gaps = 28/592 (4%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 + + +D+ + I H A+ RR + Sbjct: 334 WRETPEGPRRIDVTFAPYSDTQVPRGVAVSIHDITPLHEAEAKLRRVAEVFSSSAEAVMM 393 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLC 273 + ++ I GY F + + Sbjct: 394 TE------LDGSIIDVNNAFTEITGYARNEAIGETPEIISSDQHSPQFFQEMFRIIDAQG 447 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + + ++ + + + R L A DP Sbjct: 448 RWQGEVWNRRKNGDHFPCLLTVSAVRDEKSRVTGYVASFSDITTIKQNEHRLELLARQDP 507 Query: 331 LTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L + ++ + +D + ++ G ++ Sbjct: 508 LTGLPNRTHLRHTLDSRLARAAPGNRSTTILFIDLDQFKDVNDSLGHSAGDELLKVCSSR 567 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGA 439 LL +++++ L ++ G E + +L + + + L I + + Sbjct: 568 LLDSLRDDDILARVGGDEFVALLFDVPGYENVSTIASKLIAVLEEPIAIGGETVRVSASI 627 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 R+ + + LL + + + ++ T+ +LL R AL Sbjct: 628 GICRYPEDGADTETLLRNADTAMYAAKKAGRG-TWECYSQAMTDVATRHLLLSGAFREAL 686 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 DL + QP + G++ + D G ++P++F+ + L D +VL Sbjct: 687 TANDLEIVYQPKYDADSLALTGFEALSRWTSPDFGNVSPEEFIAIAENNGLIVELDYKVL 746 Query: 557 ESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + L+ P+ +VN+ TL Q + R+ + + + +S +++ LE+TE Sbjct: 747 GGVCAQLSRWRAARLLPPKIAVNVSGRTLQQADFYQRLRDILEHHDVSGESLELELTETA 806 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 E ++Q+ G I+IDDFGTGY++ L+RL +KID FV+++ + Sbjct: 807 LLPQPEKQAGVLDQIRALGLTISIDDFGTGYSSLSYLQRLPVATLKIDASFVRELSVSKD 866 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 I +I +A+A + +VAE VE++QQ L + G +QG+L + Sbjct: 867 ADAIAEAIIAMARALDMGIVAEGVESEQQARFLRERGPMSVQGFLYSKAVSA 918 >UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E09_THICR Length = 665 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 97/556 (17%), Positives = 210/556 (37%), Gaps = 23/556 (4%) Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII 250 + L +++ L L + +I Y Sbjct: 104 TDLAIQKKLMSLTPNALKQHPIFEMDINFFIQDKPSYLNLYLYVDQTYIQKYFAESQHNF 163 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 F + L + + Y + + + + + Sbjct: 164 FLFFGLVPFLMLMLLWFVLRKYVTSPLEFLRQYA----YYQSNVPSKFKLRELEYIRSSM 219 Query: 311 IYH-RSEWLNR-RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNL 360 + + + QA TD L+ L N L + + + +DN Sbjct: 220 VQTFDRLDNEKNELYRQARTDNLSGLANRNHLNERINWLISEYSRTGQEFAVLFMDLDNF 279 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + ++++ + ++++ + + ++ G E ++VL+ ++ L H++N Sbjct: 280 KTVNDMLGHEVGDNLLKNVSTIIQEVLRDYDIIARVGGDEFVIVLNYYQSNFELTHVINR 339 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + S ++ + + F + + + L+ ++ Sbjct: 340 ILDRISEVHMVDSHPVKVSASIGIVCFPKDGDNISTLMKNADIAMYEAKNSGKNR-FKFF 398 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 E + Q ++ L ++ AL + LY QP + G + ++ G++ Sbjct: 399 TESLHKQVIGEIQLEQDMQRALKNNEFELYFQPKICVNDGSVVGAEALVRWNDPKKGLVP 458 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRI 593 P+ F+P + L VL++ ++ T + S+NL P+ LL ++ Sbjct: 459 PNDFIPAAEKTGLMVPLGHWVLKTAIQQQVTWKEQGLADLQISINLSPVQLLDTLFDRKL 518 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 L + + P + +E+TE Q N E +++++ + K G I++DDFGTGY++ LK Sbjct: 519 QALINQSGVDPTKLDIEMTESQFMENTEQNLHSLSTMRKQGINISLDDFGTGYSSLAYLK 578 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D +KID F+ D T A+ + +I +A +L+VVAE +E + Q L + G Sbjct: 579 KFPIDTLKIDKTFIDDYAT-ESGAIFIETIVKIAHTLNLNVVAEGIEQEAQLNYLVQTGC 637 Query: 714 QYLQGYLIGRPQPLAD 729 + QGY P P+++ Sbjct: 638 ETYQGYYCSAPLPVSE 653 >UniRef50_Q10V30 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10V30_TRIEI Length = 771 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 106/575 (18%), Positives = 198/575 (34%), Gaps = 47/575 (8%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFIIF 251 ++ L E+R L ++ GY+ Sbjct: 182 ITEGKQARKAKLENERRLRALIENTTDLTWIIDAHGTSSYVSPSVMKTLGYVPEEVVSQS 241 Query: 252 TLGVGKLRYPFL---NLTWAVSTLCLLNYNQNFLQGV--ETEYSLAFILAVLISFSV--C 304 + + L + A+ + + + IL + Sbjct: 242 IFDLIHINDLLLVTCTINKAIKNPNISQTAIKYRVKNSSGSWCFFEGILTNFLDDPGVRG 301 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCL 355 ++ + + RW D LT LPN E++ + + Sbjct: 302 IIINSHDITQRKLTEERWKYNVFHDALTHLPNHDLFIDRLEEKIKETKCRKKLLFAVLLV 361 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 ID + ++ +G + I I + L L+ + +L E ++L Sbjct: 362 DIDRFKVLNNRFGHQITNKLIVMIAKKLKTLLNHGNTVARLSPDEFGILLENISDISDAT 421 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ + +N + I + + + N + + +L + Sbjct: 422 YIADQINKQLTLPIILDGNEIFINPSIGIAVGSRNISSAEHILQDAEIAMYHAKNLSRG- 480 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTAL---------DQGDLLLYAQPIRNK---EGEGYD 520 + + Q ++V L N +++AL Q + +LY QPI + E G++ Sbjct: 481 SHQVFCNSMRSQFLQRVQLENDLQSALNNIQSQSLRKQSEFILYYQPIVSLATNEITGFE 540 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSV 577 ++ G ++PD+F+PL + L L +L L +V Sbjct: 541 ALVRWQHPKLGFISPDEFIPLAEETGLIIPLGLWILREACFQLRKWQNQLPNNYHLNINV 600 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL Q ++ +I ++ + +++ LEITE N ES + +L + Sbjct: 601 NLSAKQFAQVDLIDQIDKILLETQLDGKSLKLEITESTLIENNESIRGKMSRLRARNIDL 660 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV-------TNTLDAMIVRSITDLAKAK 690 IDDFGTGY+++ L + +KID F+ I + I+RSI L+ Sbjct: 661 YIDDFGTGYSSFNYLYNFPMNTLKIDRSFINRIGLTNLVNNKSIKTIEILRSIITLSHNL 720 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 ++VVAE VET +Q L L +Y QGYL +P Sbjct: 721 GINVVAEGVETPEQALQLQALKCEYAQGYLFSKPL 755 >UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GAF n=1 Tax=Deinococcus deserti VCD115 RepID=C1D398_DEIDV Length = 960 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 105/625 (16%), Positives = 219/625 (35%), Gaps = 38/625 (6%) Query: 132 TPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIV 191 P+ + + + + + G D ++ + L L R+ Sbjct: 341 APLNVWLRLKIYAHSTGLTVLMQNITGKKAEEQAQGDRNAILEMTVQGKPLSEILHRVAT 400 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF 251 + + +R + A + L D V Sbjct: 401 MVEAQVPDYVCAVLL----RQRGRLAVYAAPSLPPEVRLALNGAPDHDGICGPAVLNGEV 456 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-------------LAVL 298 + P V L + + L + + + Sbjct: 457 LMVEDLTTDPAYADWQMVLLPHQLRACVSLPVKDGGQSVLGAMTLFAKSPGVLPPEVLRV 516 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 + + L + L + QAL D LT L N + E++ ++ Sbjct: 517 LDKARHLTAVAV---EHHHLTEQLKYQALHDALTGLANRQLFEESLQRALDAAQHVGGEL 573 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +DN + ++ G +R I L +Q + + ++ G E ++L + Sbjct: 574 AVLFIDVDNFKSVNDSLGHEAGDQVLREIASRLKGCVQHGDTVARISGDEFTVILP-FAS 632 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E + + S +H + + + + L + + Sbjct: 633 ESDALEVARQITEVLSDPMHVVDRQIKVSASIGITLTPEGGSDPEMLHRTADLAMYHAKS 692 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 ++ ++ + ++ L + +R A + D L+ QP+ + + G + ++ Sbjct: 693 --RKMSFAVFRSEMNRRAYERFQLTSFLRQAAEHNDFELHYQPLIRLFDGQLTGVEALVR 750 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLT 583 + G ++P++F+PL + L VL+ + R +VN+ L Sbjct: 751 WQHEELGAVSPERFIPLAEETGLIESIGAWVLKEACRQGVLWQAQGHSQLRVAVNVSALQ 810 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 ++N + R + + + LE+TE E S++ + QL G I++DDFG Sbjct: 811 FERRNFVETVARCLEETGFPAEQLELELTERVIMRQVEESVWRMRQLRDLGVWISVDDFG 870 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L RL +I+KID FV + + +V++I LA++ L +AE +ET + Sbjct: 871 TGYSSLSYLPRLPINILKIDRSFVTGLSETSPTFPVVQAILSLARSLHLEAIAEGIETNE 930 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 + ++L LG QG+ GR +P + Sbjct: 931 ELSVLKHLGCDLGQGHFFGRAKPAS 955 >UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CC56_ACAM1 Length = 787 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 100/443 (22%), Positives = 180/443 (40%), Gaps = 33/443 (7%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------------------KSFCCLRI 357 + +AL D LT LP+ + +++ + L + Sbjct: 327 HRTAEQLKQKALFDNLTGLPSRDYFYEQLQRKLQQVQRQQLEGYSRQAELCHFAILFLDV 386 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + +I + L ++ + L +L G E ++L G + + Sbjct: 387 DHFKLVNDSLGHSVGDQLLVAIAQQLKESLRPQDLLARLGGDEFAILLDGVVNHQQAHKI 446 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + ++ + N + + + LL ++ AH Sbjct: 447 VQRIQRSLAKPLKLNQQEVFTSVSIGITHSTSLYQHPEELLRDADTAMYRAKAHGRG-GY 505 Query: 475 DSREEMVSGQTTKQVLLLNTIR---TALDQGD--LLLYAQPIRNKE---GEGYDEILARL 526 +E + Q ++ L N++R A++QG LL QPI G++ +L Sbjct: 506 VVFDETMHKQVRSRLWLGNSLRYAVKAIEQGQNPFLLQYQPIFCLRQQRLIGFEALLRWH 565 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL 585 G+++P+KF+P+ + L VL++ + LA + S+N+ L Sbjct: 566 HPQQGLISPEKFIPVAEETGLIIPLGQWVLKAACQQLAVWEQEFSVPLTMSINVSSQQFL 625 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q N + L + + ++ + LEITE + +EQL G +++DDFGTG Sbjct: 626 QPNFVQSVESLMQSHQLAGHHLKLEITETVLMESTHYVTDRLEQLQNLGISLSLDDFGTG 685 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L L + +KID FV I IV++I LA ++VVAE +ET +Q Sbjct: 686 YSSLNYLYNLPINTLKIDRSFVWGIGQGQD--QIVKTIIALAHGLEMNVVAEGIETIEQM 743 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 LH LG + QGY RP Sbjct: 744 QYLHTLGCELGQGYWFARPLQPE 766 >UniRef50_A4STK2 GGDEF/EAL domain protein n=2 Tax=Aeromonas RepID=A4STK2_AERS4 Length = 848 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 95/549 (17%), Positives = 196/549 (35%), Gaps = 22/549 (4%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLL-LLCTPYENDFIAGYLVPVF---FIIFTLGV 255 +R + LS + ++ + I GY Sbjct: 286 LKRHAEQLKLSHRVYDNLSEAILVCDADSRIISVNPAFEQITGYSGEEVCGQRPSMLKSG 345 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYH 313 + + ++ A+ + + + Y +++ L + + Sbjct: 346 LHDQAFYADMYHALERVGVWRGEVWNKRKNGKLYPQQLMISTLREGGKISQYIGIFSDLS 405 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKSFCCLRIDNLEFMSRHYGL 369 +++ ++ QA D LT LPN + E+ + L ++N + ++ Sbjct: 406 QTKLAEQKIAAQANYDNLTGLPNRWLFGRCLTRFCERGERFALMVLDLNNFKAVNNSMDH 465 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQI 426 +R + L+ ++ + + ++ G E ++ G + + + +R Sbjct: 466 HAGDALLREVSDRLVSRVRTEDLVARIGGDEFAFLVPGIVNRRQAEVFAKQVIGGFARPF 525 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 N L + G+ LL + +L S + + Sbjct: 526 MLANQHLYVTATIGITLCPGDGVESDELLRNAEQALFAAKRQGRLLG--SYCASMREEVR 583 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++ + + A+ L + QPI + + ++ G ++P F+PL Sbjct: 584 QRHQMQQDLAEAIKLEQLTMAYQPIWDNRSGRVAKLEALVRWYHPHWGQVSPADFIPLAE 643 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLL--QKNIAGRIIRLFKRY 600 + L VL + LA + S+N L A +++ + Sbjct: 644 EAGLIQGLGALVLWQSCRDLARLQQSGFPDLQMSINRSTLEFQTIDPE-ASEWLKVIHHF 702 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P +++EITE ++ I+ L + G ++AIDDFGTGY+ L+ D++ Sbjct: 703 GLDPCDIVIEITESLLMETSDQHRVRIDALREAGCKLAIDDFGTGYSALNYLRNFPVDLV 762 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+ I N D +++ I ++ + VV E VET++Q L + G + QG+L Sbjct: 763 KIDRAFVRHIPFNEQDRLLLDGIINIVHNLGMQVVIEGVETREQLNFLCQKGCAFTQGFL 822 Query: 721 IGRPQPLAD 729 + RP D Sbjct: 823 LSRPLAYDD 831 >UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AF7_DECAR Length = 1094 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 90/434 (20%), Positives = 159/434 (36%), Gaps = 19/434 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + + QA D LT LPN G + + +D + ++ Sbjct: 646 ERNRIEAKLKYQASFDALTGLPNRSLFYIRLRDEMLRAARTGHGGALLFIDLDRFKEVND 705 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + ++ ++ + +L G E ++VL L + + Sbjct: 706 SLGHESGDSLLVEAAERIRAQVRASDLVARLGGDEFVVVLPDVRAPEHLGLLAQAIVDAL 765 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + + E LL + E + Sbjct: 766 VVPFVLDGHQAYVSASVGIACYPQDAEDADILLSCADKAMYVAKELGRN-GFCFFTESMQ 824 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 ++ L + +R+AL G LLL+ QPI + + +L G++ PD+F+ Sbjct: 825 TSADYRLKLSHDLRSALADGQLLLHYQPIVEVESGRVVKAEALLRWRHPQRGMVPPDQFI 884 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK----GPRFSVNLMPLTLLQKNIAGRIIR 595 L + L V + + SVN+ P ++ + Sbjct: 885 HLAEETGLIHAIGDWVFQQAALTARDWAARMPAGAADCQISVNMSPRQFVKDGSEAGWLD 944 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 K + P+ + LEITE + G +I++DDFGTGY+ LK+ Sbjct: 945 YLKSIGLDPRYIGLEITEGLLLDERLHVAERLAAFRASGIQISLDDFGTGYSAMAYLKKY 1004 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV+D+V+++ D I +++ +A L VAE VET +Q+ LL G Sbjct: 1005 PIDYLKIDRTFVRDLVSDSGDRAIAQAMIFMASQLGLKTVAEGVETAEQRDLLQSFGCDL 1064 Query: 716 LQGYLIGRPQPLAD 729 +QGY RP P + Sbjct: 1065 IQGYYYARPLPRDE 1078 Score = 70.4 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 74/307 (24%), Gaps = 13/307 (4%) Query: 17 AFTLTVVLIQLSRFISPLAI-IHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 TL LI + ++ AI H FLA P L G++ T Sbjct: 60 HATLLAWLIGMQAIVAGRAIQAHRLKGFLASAPGRERLHAWIRHFSYGLLLAGLHWGGTA 119 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + A+ L V + +IL L + + + Sbjct: 120 FLFMSPENVSAAMFLLLVLTGVAASASILHTSLPATAVPFIALVLIPVAVRMYAFENVGS 179 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 L + ++I +D L A I + + Sbjct: 180 YASVAVLGFLLLLWAAARRGHRMLWNSIAVGLDNERLQHA--IMADKLAAEGALRAAAQE 237 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 Q ++ + + R +A + + + I + Sbjct: 238 YQEVFAHITDGLILIDVRDDASFRVAGANAAMAQIVGVPVESAIGKTFGELVEPELASQA 297 Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIY 312 N V ++Y F + +L + + + + + R Sbjct: 298 E------ANYRRCVDLGDPIHYESEFRR-SGVVRHFDSMLVPMSDGAGRVFRVIGIHRDI 350 Query: 313 HRSEWLN 319 + L Sbjct: 351 TERKQLE 357 >UniRef50_A5PAA5 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAA5_9SPHN Length = 783 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 117/664 (17%), Positives = 213/664 (32%), Gaps = 26/664 (3%) Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSM 140 + +GS + V+ + G+ + + P Sbjct: 88 WRRILILQAIGSTIWFVVFPYLAPYAEGLEIAVLGIIGTAILCGTLLVHRNAPQAALFHT 147 Query: 141 YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTA-VLIYNMLFYYLTRMIVSPHFAQIL 199 + + +G ++ + F R + Sbjct: 148 LTMAPSLAVAAVMIGGWGAWPSLILIASFAVALIGETRTQERYFVGAARAEIERRENNAT 207 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 R + + WL + + + L + Sbjct: 208 VRMLLNDYEEQSS-----DWLWTVGPRGNMRDVTERLGAALSTDPDHLEGMPFLDLFVAG 262 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 L + L+ + + R + Sbjct: 263 EERDALATRLLERSPFRDLIVRLRVKGDVRYWRISARPRDD--GRMSGVARDVTAGRLIE 320 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMM 371 R A D LT L N + + + + L +D+ + ++ G ++ Sbjct: 321 ERVAFMAHYDNLTGLANRYLFNERLRSLAGEQASRGSNIALFYLDLDDFKAINDTRGHLV 380 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHW 428 +R + L ++ + + +L G E +++ +G L + S Sbjct: 381 GDRMLREVGTRLEQEVRSEDLVARLGGDEFAVLIETRAGDGLLIERAHRFLSVVRAPYEI 440 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + R + L+ + + L E + ++ Sbjct: 441 EGHSYRVSTSVGVARCTDGDCDAEELMRRADLALYAAKEKGRD-NLALFEPALDRIARER 499 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 +R AL +G + ++ Q I + E G + +L GI+ P FL + + Sbjct: 500 RETEIDLREALTRGQMRMHYQAIVDLDTGETTGLEALLRWYHPQRGIIPPGDFLTIAEET 559 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 + V+ L A P R ++NL P + N+ + + +I+P+ Sbjct: 560 GMITSLGEWVIRQTLSDAAALPG---NFRIAINLSPTQVKNPNLVATVAQAIHATNIAPE 616 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 V LEITE + + +L + G RIA+DDFGTGY++ L+R D IKID Sbjct: 617 RVELEITEHVLMDQGAAGHVTLLRLRELGIRIALDDFGTGYSSLGYLRRFPFDRIKIDRT 676 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV D+ ++ IV +IT LA A + AE +E Q+Q LL KLGVQ QG+LIGRP Sbjct: 677 FVTDVASDLGSQAIVSTITRLADALGMDTTAEGIEDQRQLDLLRKLGVQEAQGFLIGRPV 736 Query: 726 PLAD 729 P + Sbjct: 737 PPEE 740 >UniRef50_A1K8Z7 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K8Z7_AZOSB Length = 691 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 93/434 (21%), Positives = 171/434 (39%), Gaps = 16/434 (3%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLE 361 R+ R R + A D LT LPN + A A L +D + Sbjct: 242 RLIDRLRDERSRAYQLASHDHLTGLPNRLLFTELANSHLSRARRSHAPFVMMFLDLDRFK 301 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + ++ + L ++E + + +L G E +L+L+ + + L Sbjct: 302 RINDTLGHRVGDLLLQEVALRLRQTVRETDIVARLGGDEFVLLLTELDALDDASRVARKL 361 Query: 422 NS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 + + + ++M + ++ ++ ++ + Sbjct: 362 IEAIGQPMVLDGHEIEMRPSVGIAIHPRDGMDVEAMMRNADSAMYEAKRSGSGR-FHYYD 420 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTP 535 ++ +++ Q+ L R A+ + +L+ QP + ++ + G++ P Sbjct: 421 PSLNSRSSLQLDLNGRFRRAILGNEFVLHYQPRVTLNGFRVTSLEALIRWQHPERGLVPP 480 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRII 594 +F+ Q L V+ + +A + ++N+ P L + I Sbjct: 481 GEFIEYAEQEGLVVELGNWVVREACRQIAAWIAEGLEIVPVAINVSPKQLRDHSFVEVIR 540 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 Y I P + +EITE + E +E L G +IA+DD+GTG+++ LK+ Sbjct: 541 ESVAHYGIRPALLEIEITERCVVEDFERPRAALETLSALGLKIALDDYGTGFSSLSYLKQ 600 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L DIIKID F+ DI DA IV S L L+V+AE VET++Q L G Sbjct: 601 LPIDIIKIDRSFISDIRNARHDAAIVASTIALGHNLGLTVIAEGVETREQVIYLRTAGCD 660 Query: 715 YLQGYLIGRPQPLA 728 +QGY +P P Sbjct: 661 EVQGYYFQKPAPPD 674 >UniRef50_A6SXB0 Signal transduction protein n=2 Tax=Oxalobacteraceae RepID=A6SXB0_JANMA Length = 898 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 91/565 (16%), Positives = 193/565 (34%), Gaps = 36/565 (6%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV------------- 244 I + + + + LL N+FI + V Sbjct: 323 IRLAWRKQQADAIRETYRIATEGGNEGFYI-LLPMRDRNEFITDFQVVDCNEKGASFYNM 381 Query: 245 --PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 F + Y + + + ++ ++ ++ + Sbjct: 382 NKDKFTGVKVSDFYSGEYFDKVMQAYRIAMDTGFFEDDYQVPADSPVDAEWLKRKFVRSE 441 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 L +R + R A D LT LPN + Sbjct: 442 NGLAITLRDISEPKRHEREMSRLATEDGLTALPNRHWFMSYLPKALENARANATMLAILF 501 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D+ + ++ G + ++ + L +++ ++K+ ++ G E ++L +E Sbjct: 502 IDLDDFKNVNDTLGHSAGDQLLCTVAKRLRSVLRPSDKVIRIGGDEFTVILEAIHSEEEA 561 Query: 415 QHMVNIL---NSRQIHWN----NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 H+ + + + + +G F + + ++ L+ + Sbjct: 562 AHIAHAINQALREPFEISRDTTSQKNRIGGSIGISIFPRDGQDVETLVKNADIAMYAAKT 621 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 + + ++ ++ A+ + L+Y QP + G + ++ Sbjct: 622 GSKGQ-FRFYDHTLYEDIKMRLNTEQELQQAIKEDQFLIYYQPRVQTQTGKLLGIEALIR 680 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLT 583 G++ P+ F+ L + L V++ + LA+ SVN+ P Sbjct: 681 WQHPTRGLVLPNDFIGLAEESGLINPIGELVVDKVCAQLASWLKQGVEAVPVSVNVSPHQ 740 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + I ++ I + +E+TE N + ++ G ++ +DDFG Sbjct: 741 FNEGKVKKSIAASLAKHGIPASLLEIELTESAMMRNIGDIFDELTAINAMGIKVHVDDFG 800 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L+RL DI+KID F + + +I +AKA + VVAE VET + Sbjct: 801 TGYSSLSLLQRLDMDILKIDQAFTSQLGRGKDGEIFFTAIVSMAKALGMRVVAEGVETLE 860 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q +L L +QGY + P P Sbjct: 861 QLHILQTLSCDEVQGYYVAWPLPAD 885 >UniRef50_B8KIB3 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KIB3_9GAMM Length = 681 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 127/659 (19%), Positives = 224/659 (33%), Gaps = 32/659 (4%) Query: 95 FVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIS 154 +V+ ++ T R V L L + + S+Y F +S Sbjct: 13 WVLSLLWLVILGFYLTSRGQAQEDRNVSILLVILSIDAFRTVFESVYFGLYFNSLYGILS 72 Query: 155 TFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLT----RMIVSPHFAQILWRRDIAPSLGK 210 A ++V L L + +LF + R I + + Sbjct: 73 PSIAVELAKPSLVLLPKLINILAGLVILFILIRNWLPRAIREKRASDDALQLASTVFTHA 132 Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTW 267 ++ + ++ V L ++GY + + Sbjct: 133 DEG---IVIMSPEGV---TLDVNAAFAALSGYGRAELIGSKVGIHRSKEHSNSFYAEIWR 186 Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHL 324 A + Y + + V + M S R+ Sbjct: 187 AAREEGSWSGVIWNRHKSGVVYPAQMSVTAVMGPDGEIVRFVCMFTDVAESVEQQRQLEH 246 Query: 325 QALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D LT LPN L Q + + +D+ + ++ YG + Sbjct: 247 LAHFDLLTGLPNRSLLSDRLSQAVLQCETRSQSVAVLFVDLDDFKKLNDQYGRPAADRLL 306 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGL 433 + + ++ + L + G E + VL + E + + ++ L + I + + Sbjct: 307 LEVSSNMQGALRSVDTLARFGGDEFVAVLPNLDDEMQCETILTKLMEGVRQPIKIADDNV 366 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + + + L+ + + +Q L Sbjct: 367 SLSASMGVTLYPQDSADPEQLIRHADQAMYLAKGKGKG-VWQYFDTSRDIAFQEQSRLQG 425 Query: 494 TIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +IR AL G +L+ QP+ +E G + ++ DG + P FL L+ Sbjct: 426 SIRRALINGGFVLHFQPLIQLATQELVGVEALIRWETDDGECLEPAAFLGATQNNALAVD 485 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI-SPQAVIL 609 VL + + + SVN+ L Q A R+ L + + +P + L Sbjct: 486 LGDWVLRTAMAQIEAWSEQGLRIGVSVNVDGFHLQQPGFAARLAELLATHALVNPANLEL 545 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+ E A N E+ + + + G AIDDFGTGY++ L+RL A IKID FV+D Sbjct: 546 EVLETSALDNLEAVATVMAECTELGVSFAIDDFGTGYSSLSYLRRLPAQRIKIDQSFVRD 605 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + D IV + LA A +VVAE VE+++ L LG + QGY I RP P Sbjct: 606 MLDDASDLSIVEGVIGLAHAFKRTVVAEGVESEEHCHALLSLGCELAQGYGIARPMPAE 664 >UniRef50_B7L1R8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=7 Tax=Rhizobiales RepID=B7L1R8_METC4 Length = 795 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 120/731 (16%), Positives = 243/731 (33%), Gaps = 37/731 (5%) Query: 16 LAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCT 74 F + + S I +A + + L+++ F Sbjct: 64 THFIAMLAFAPGVPSGYQVALTGISLIIAIALVGSGLSLAVMVGGRAAAWAGGAILGFGI 123 Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 ++ + + A L LG + R + + Sbjct: 124 AAMHYTGMAAYEVAGHKAWDPATVAASLALGGLLGGAALAAQVGAWGLSRQLPAAFLLLL 183 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 I + + +A + + + I + + + Sbjct: 184 AICSHHFTAMGAVTITPDPTLTVSEAAVPNAWLAVAVALASFAILLLAGAAMALAVRDRR 243 Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 A++ R +L+ A +++ T + LV + Sbjct: 244 HAKLE-----------SDRLRSLANAAVEGLIVCTGDTVVSANRSFAKLVGMPQNALAGT 292 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRIYH 313 P A+++ + I+ + VR Sbjct: 293 TLSAYLPGDAARLALASQLERPVEAELKLADGGMVPVEVIMQPVEYEGRPHYAIAVRDLR 352 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSR 365 + A D LT L N + Q +QE + CL +D + ++ Sbjct: 353 ARRQAESQIQFLAHHDALTGLANRASFGQRLDQEMRAADAGERKLALLCLDLDRFKEVND 412 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ 425 +G + S+ R + + + + + +L G E +++ + + Sbjct: 413 LFGHAAGDAMLESVARIVTGELDDTQMMARLGGDEFAVLMP-CGGPSEAGRLAERILEA- 470 Query: 426 IHWNNTGL-----DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + LL ++ + E Sbjct: 471 --LRSGRADTGGPQIATSIGVALYPDDALEQAALLSYADTALYRAKSEGRG-TYRFFEAR 527 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 + + ++ +L + +R A+ +G++ L QP + G++ +L + G ++P Sbjct: 528 MGIEVRERRVLEHDLRHAVARGEMHLVYQPQTDVGTGAVIGFEALLRWKHPERGYVSPAV 587 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+P+ + ++ + VL + AT P +VN+ + + + G + + Sbjct: 588 FIPIAEESDVILQIGEWVLREACREAATWPQ---PLTIAVNVSAVQIHSTHFVGLVHEVL 644 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 R ++P + +E+TE S+ ++ + QL G RIA+DDFGTGY++ L+ Sbjct: 645 LRTGLAPHRLEVEVTETALISDPNRALLTLRQLKALGLRIAMDDFGTGYSSLSNLRSFPF 704 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D IKIDG FV+ + +N A IVRS+ L + L V+AE VET+ + L Q Sbjct: 705 DKIKIDGSFVRSVDSNEQTAAIVRSVLGLGRGLGLPVLAEGVETEAELGFLIAEQCHAAQ 764 Query: 718 GYLIGRPQPLA 728 GYL+GRP P+A Sbjct: 765 GYLMGRPSPIA 775 >UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC21_CELJU Length = 1306 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 103/431 (23%), Positives = 178/431 (41%), Gaps = 22/431 (5%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLM 370 + + A DPLT LPN R L + + +D+ + ++ G Sbjct: 858 QEQIYRLAFFDPLTRLPNRRMLMDRLRLIIAQSARTSQQGALLFIDLDHFKLLNDTRGHH 917 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNIL---N 422 + + + + +++ + +L G E ++V + +H L Sbjct: 918 IGDQLLVQVAERISSIIRTTDLAARLGGDEFVVVFDNLGTDPDKAALEAKHRAEQLHELI 977 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + F+ N ++ LL Q+ + + + Sbjct: 978 NLPYPLQQSVYHCTISIGVNLFNANNTSIDDLLRHADVAMYQAKDGGRN-TIRFFDPHMQ 1036 Query: 483 GQTTKQVLLLNTIRTALDQG-DLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFL 539 + K+ + +R+A + G L Y Q N E G + +L + G + P F+ Sbjct: 1037 SRLEKRAEIEADLRSAHESGTQLTPYYQAQVNHTGEVLGAELLLRWIHPRKGTIAPGDFI 1096 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 P+ Q L QV+ K L +VN+ P+ Q + +I Sbjct: 1097 PVAEQTGLIVAIGRQVIRMACKQLQCWQQQPGFGHLTLAVNVSPIQFNQSSFVEDVISCV 1156 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 Y ++P + LE+TE N E S+ +++L +FG A+DDFG GY++ LK+L Sbjct: 1157 LDYDVNPNHLKLELTESSLLKNVEHSIEKMQRLQEFGISFAMDDFGIGYSSLSYLKKLPL 1216 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV+DI + DA+IVR+I +A +L+V+AE VET+ Q+ L + G Q Sbjct: 1217 DQLKIDRTFVRDITIDPNDAIIVRTIIAMAANMNLNVIAEGVETELQKQFLEQNGCLLFQ 1276 Query: 718 GYLIGRPQPLA 728 GY G+P PL Sbjct: 1277 GYYFGKPMPLD 1287 Score = 61.9 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 55/187 (29%), Gaps = 8/187 (4%) Query: 14 FTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFC 73 + L + + ++ ++ + I L W+P + ++ + + W V Sbjct: 18 WPLQLAVALAY-GITGWLGLNIPLSDGNITLFWLPTGIAVAAFYRYSWTLWPGVFLAALI 76 Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 +L + LG+ +L C +LR R + LG++ Sbjct: 77 VSLSTGLPWLNSGLIALGNTLAPLL-TCYLLRRTDSNITRLTPRDSIGFLLFSALGMIVS 135 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 L+ F + + D L +F A + R ++ Sbjct: 136 AATGSLSLLLLGREVFS------VAQGFLNWWMGDSLGVFLAAPLLVNFSLGECRRALAQ 189 Query: 194 HFAQILW 200 IL Sbjct: 190 PRELILI 196 Score = 55.0 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/351 (9%), Positives = 79/351 (22%), Gaps = 31/351 (8%) Query: 19 TLTVVLIQLSRFISPLAIIHSSYIFLA-WMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 ++ L +S S + + ++ GV + +L Sbjct: 122 IGFLLFSALGMIVSAATGSLSLLLLGREVFSVAQGFLNWWMGDSLGVFLAAPLLVNFSLG 181 Query: 78 --NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF---WLGLVT 132 L+ + +++ + VV C L + ++ W GL Sbjct: 182 ECRRALAQPRELILIILASLVVAALCFPLNNLTSHSPAGVIHLPILFTSFICMAWAGLRF 241 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVS 192 + L I + + + + + +T Sbjct: 242 GLPGASLSTLGFGLVALVSTIQGLGPLSFDSTQLSAWMIWIYGFCMTLLGL-MITSAHTQ 300 Query: 193 PHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFT 252 A ++K + ++ + G Sbjct: 301 LRTASHQLDETSHEQAQQKKHLEAIIHAIPDLLIETNREGH--CLWANGPTHWHGLHSHE 358 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY--------SLAFILAVLISFSVC 304 L +LR + W + + + + ++ + +A Sbjct: 359 LPGRELRELLPSDAWQTWSQAIHEADDWGISQGKSIHLIQGTQSLWYELSIAKSSGQRPH 418 Query: 305 ---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSF 352 + +VR + + QA L N + E + Sbjct: 419 EDRFVCLVRDITKRVNI-----YQA------DLANEQRFRNIFEATRNIAV 458 Score = 44.6 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 39/141 (27%), Gaps = 13/141 (9%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA-------LSVLLLLLCTPYENDF 238 L + ++ + R+ + A W S ++ L Sbjct: 566 LEQELMERRQIEGALRQSERLLESAQIMARLAYWEWDPQDDSYKFSRSMVELFGLPAA-Q 624 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYS--LAFILA 296 + G L P G + + +L+ ++ + N L Y + + Sbjct: 625 LTGQLKPFLAGCMPAGQRR--HFIQSLSTSLEHKTPIATEINLLLH-GHPYWFAVQGNID 681 Query: 297 VLISFSVCLLYMVRIYHRSEW 317 ++C+ ++ + Sbjct: 682 EHADGTLCMRGTLQDITERKR 702 >UniRef50_Q1NLX3 GGDEF:EAL n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NLX3_9DELT Length = 775 Score = 598 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 96/429 (22%), Positives = 176/429 (41%), Gaps = 16/429 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSR 365 E + QA D LT LPN + Q + L +DN + ++ Sbjct: 332 EVEQAMEQLRHQATHDLLTGLPNRELFQDRLRQATRRAAKEERPVAVLQLDLDNFKAVNN 391 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 ++G +R I R L + ++ + +L G E +++L + M + + Sbjct: 392 NFGHAAGDEVLRFIARRLQQALADDCTVGRLSGDEFVILLPNIKECRESAEMARQILAAL 451 Query: 425 --QIHWNNTG-LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + +T + +G F + + + LL + Q+ + Sbjct: 452 ETPVSTPHTPNITVGGSVGIACFPDDGKDDKTLLRHVEMAMYQAKKAGRG-TYAFYAREL 510 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKF 538 + + ++L + ++TAL + L L+ QP + G + +L + G + PD+F Sbjct: 511 NQRHQDDLVLHHKLKTALAENQLELHYQPKVAMNDGRIIGVEALLRWHDKELGQVGPDRF 570 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ L VL + + LA + + +VNL P Q ++ R+ + Sbjct: 571 IPMAEATGLIVPLGDWVLNTACRQLAAWYAAGRELKMAVNLSPQQFRQPDLVNRLANILA 630 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + LEITE A N ++ + L G +A+DDFGTG+++ LK L Sbjct: 631 ATGAPAHLLELEITETAAMENFAATSRQLHNLSDLGLTLALDDFGTGHSSLAYLKSLPIS 690 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ D+ + +IVR++ +A + L VAE VE+++Q L + QG Sbjct: 691 QLKIDRSFISDLTFEENNRIIVRAVLSMAASMELETVAEGVESEEQLDFLRQHHCTSYQG 750 Query: 719 YLIGRPQPL 727 +L R P Sbjct: 751 WLFARALPA 759 >UniRef50_Q2BQB2 Sensory box protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQB2_9GAMM Length = 677 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 91/431 (21%), Positives = 175/431 (40%), Gaps = 16/431 (3%) Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMS 364 E A D LT L N A ++ + + + +D + ++ Sbjct: 229 SELEQQKNSLRQIAEHDSLTGLANREAFLKSLNEVIIHCSTNKRRAAVFFIDLDKFKQIN 288 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + +++++ L ++ G E +++ + L Sbjct: 289 DSMGHSAGDAVLIEMAHRFTSTLRKSDSLARIGGDEFTVIIDPLYESKDAAELAKKLIAS 348 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + L + + + T Q L+ Q+ ++ Sbjct: 349 LEEPYEYEDQTLYLNTSIGIAVYPEDGTTPQELMKNADSAMYQAKKAGGN-TFHFYNRLM 407 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKF 538 + T ++ L + +R+A+ Q L +Y QP + + G + + + + G++ P F Sbjct: 408 NQDTLAKIQLESELRSAIQQDQLTVYYQPQFDLKTRKLVGVEALARWIHPEKGLIPPCTF 467 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +PL + L + +L + +A + +VNL L +AG I + Sbjct: 468 IPLAEEKGLIHQVGSIILTKACQQMAQWNGEREAQIALAVNLSAKQLNTPELAGSISDIL 527 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 ++ Q + LEITE S+ E +++ +EQL G R+A+DDFGTGY++ LK+L Sbjct: 528 HTTGLNAQHLELEITESCVLSDPEDAIHKLEQLKALGIRLAMDDFGTGYSSLAYLKKLPL 587 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV + N DA I +++ L + +L+V+AE +E + Q +L + G Q Sbjct: 588 DKLKIDKSFVDGLEINPEDAAICQAVIALGHSLNLTVIAEGLEHEVQATILAEQGCDQAQ 647 Query: 718 GYLIGRPQPLA 728 GY +P Sbjct: 648 GYFFAKPISAE 658 >UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT Length = 595 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 85/434 (19%), Positives = 173/434 (39%), Gaps = 19/434 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMS 364 + + + A D LT L N + E++ + + +D + ++ Sbjct: 154 DLKQIQEKLSFHARQDTLTHLVNRSVFLERIDLALKRFHEEEDYLFAVFVIDLDRFKMIN 213 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--- 421 G + + + R L L+ + + + ++ G E ++L + + Sbjct: 214 DSDGHQVGDLLLVEVSRILESLVSQADTVARVGGDEFAILLDPIRDVNEALKLAQNIKEA 273 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + + + + + + +L ++ + + + Sbjct: 274 LTTSFFIQGRQVFISSSIGLTFSESSYNSALEILRDADIAMGKAKQKGRGK-YEIFNQEM 332 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 Q + L +R +++ + +Y QPI N + G++ ++ D G ++P +F Sbjct: 333 HTQALNLLTLETDLRYGIEKQEFEVYYQPIMNLNPIKLVGFEALIRWQHPDKGFISPGEF 392 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIR 595 +P+ L VLE + + + T + + +VNL I I Sbjct: 393 IPVAENTGLIIPIGKIVLEKVCQQIQTWKKKFQQITILKIAVNLSSKQFKNAYILQEIDE 452 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + +R ++ + LEITE +++ ++ ++QL + I +DDFGTGY++ L R Sbjct: 453 VMERTGLTSNNLKLEITETSLIDHSQETIKLLKQLKQRNLEICLDDFGTGYSSLSYLHRF 512 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID F+ I + I++SI LA ++VVAE +ET++Q L KL + Sbjct: 513 PVDTLKIDRSFINCIGQPEENLEIIQSIIHLAHNLGMNVVAEGIETEEQLIYLQKLNCDF 572 Query: 716 LQGYLIGRPQPLAD 729 QGYL RP + Sbjct: 573 GQGYLFNRPLTAQE 586 >UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMB6_LYSSC Length = 782 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 90/422 (21%), Positives = 170/422 (40%), Gaps = 16/422 (3%) Query: 322 WHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRV 373 A DPLT LPN R EQ + S + +DN + ++ G Sbjct: 347 LSKFAFYDPLTNLPNRRQFVFTLEQAITQASSEQSKFSIIFIDVDNFKQVNDTLGHSAGD 406 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNN 430 ++ + L + + +L G E +++L L+ M++ L + + Sbjct: 407 ELLQKVAEQLQSSIGSEGVVARLGGDEFVILLEHRADHAYLEKMLSSLRDSFVQPFTIHG 466 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + + + T + LL ++ + ++ K+ Sbjct: 467 QITFVQMSLGIASYPIDGVTQEELLKHADIAMYKAKESGGN-NHRFFDNKMNELVIKKNQ 525 Query: 491 LLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + IR AL + ++ ++ QP + G++ ++ + G ++P+ F+P+ + Sbjct: 526 IEQMIRLALARNEINVHYQPQIEPATGKLRGFEALVRWKSPELGFVSPEDFIPIAEKTGF 585 Query: 548 SARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 + D V+ SVN+ L L + + ++ + + P+ Sbjct: 586 ITQIDEWVMYQACLKNVELQHQFGYPFLMSVNISALQLERTDFVDKVQLILNETKLKPEY 645 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + +EITE + ESS+ + +L G +IA DDFGTGY++ L L +KID Sbjct: 646 LEIEITESILVESFESSICILRKLENLGVKIAQDDFGTGYSSLNYLSLLPIHTLKIDRSL 705 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 ++++ + T + I+ SI LA VVAE VET++Q LL + ++QGY RP Sbjct: 706 IQNMTSATAEKTIIESIIQLAHKLGHDVVAEGVETKEQYILLKEWNCDFVQGYYFSRPVS 765 Query: 727 LA 728 Sbjct: 766 ED 767 >UniRef50_Q21YJ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21YJ3_RHOFD Length = 765 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 133/668 (19%), Positives = 235/668 (35%), Gaps = 33/668 (4%) Query: 82 SFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY 141 + + Q +++ A+L Q + + L G V + Sbjct: 89 AAASRQMHGTVQQNLMVRHLALLDAQAHVLASSDVDGVALDSWLPA-GFVAQALAQPMSE 147 Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 L S S + D + + L + VS +I Sbjct: 148 LSISAPVVNFASSERVIYFGRPIKLADNSRVLAVAEVQVSLLNAILSQGVSISGLEITLE 207 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 R L E L W LS L + T + A L I+ Sbjct: 208 RGDGQLLSSEPAQEQL-WGTQLSPPLGQVGTQKQVLRGAARLSGQAAIVLAQPTLYRDIF 266 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWL--- 318 + L +NF+ GV ++L + + L+ + ++ Sbjct: 267 IAASIPIDAVLANWREQRNFILGVSLLFALMILAS-----GGLALWYLERLAQARQAIAS 321 Query: 319 -NRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGL 369 A DPLT LPN R L + + L +D+ + ++ G Sbjct: 322 SKAEIEQLAFFDPLTNLPNRRLLMDRLQHALSANARSGRCGALLFLDLDHFKTLNDTLGH 381 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-RLQHMVNIL------- 421 + ++ + + L ++E + + +L G E +++L + + Sbjct: 382 EVGDLLLQQVAQRLKTCLREQDTVARLGGDEFVVMLEDLAEHSLEAAALARRIGEKILAS 441 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQ-ETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 ++ F+ T LL Q Q A L + Sbjct: 442 LNQPYVLMTQTYRSTCSVGAALFEATTPITAADLLKQADIAMYQVKARGRND-LCFFDPQ 500 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKF 538 + T L + ++ AL +G+ LY QP + G + ++ L G++ P +F Sbjct: 501 MQASITAHAQLEDDLQAALVRGEFALYYQPQYQLQEGVVGAEALIRWLHPLRGLVPPVEF 560 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRL 596 + + + L + L VL + + LA D + +VN+ Q + ++ + Sbjct: 561 IAVAEESELINQIGLWVLRTACQQLARWQGDPRACDLHLAVNVSARQFRQPDFVAQVSTV 620 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 I P + LE+TE N ++ + +L G R ++DDFGTG ++ L RL Sbjct: 621 VHESGIKPHLLKLELTESLVLDNVMDTIAKMNELKDLGVRFSMDDFGTGQSSLSYLTRLP 680 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 + +KID FV++I D +IV++I +A++ LSV+AE VET QQ L G Sbjct: 681 LNQLKIDQSFVRNIGLQATDDVIVQTIIGMARSLGLSVIAEGVETPAQQEFLALHGCTLY 740 Query: 717 QGYLIGRP 724 QGYL G+P Sbjct: 741 QGYLFGKP 748 >UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TM92_ACIAC Length = 724 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 134/728 (18%), Positives = 244/728 (33%), Gaps = 65/728 (8%) Query: 27 LSRFISPLAIIHSSYIFLAWMPLCVMLSILF-------IFGWRGVVPVLCGMFCTNLWNF 79 + P+ + S I + + + L+ W V+ G + Sbjct: 1 MPSHYDPMVVAASFAIAVLASYVTLDLARRVHVSQRHIGLVWWAAGSVVMGTGIWAMHFL 60 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCS 139 + Q + LG + L + R+ ++ + + GI Sbjct: 61 GMQAFQLPIALGFSGGLTLLSWLAAVLASALALGMASLPRFGRWQILFGAVCMGSGISGM 120 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 Y+ + I V+ LS+ A +I + Sbjct: 121 HYIGMKAMKMSIDIVWDP--------VLVALSVAVAFFASATALRIFQWLIHVRQDRRRA 172 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 W + A + +A + + + + L Sbjct: 173 WYQAAAAL---------IMGIAICGMHYTGMAAASFPEGSICLSADGLGGPGLTAMVLLS 223 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 L L+ + + Q + L N Sbjct: 224 SGMLLLSTLFTAVLDARLQSTARQLNASLQESNARLT--------------------EAN 263 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQ-------------EAGKSFCCLRIDNLEFMSRH 366 + QA DPLTLLPN E + +D + ++ Sbjct: 264 AQLQKQAFADPLTLLPNRLLFEDRLSHALLRLDRMRRRDAGQRLGVMFVDLDGFKPINDS 323 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--- 423 +G +RS L +E++ + ++ G E LL+L + N L + Sbjct: 324 FGHAAGDAILRSAAERLRLQARESDTVARVGGDEFLLLLENVNDPADCLAVANRLLNSLG 383 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + + + + E L+ + E + Sbjct: 384 QPFEVAGKTVQIACSVGIVVYPDHGER-DKLVANADAAMYAAKRAGGN-GYAMFESHMDS 441 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 T Q+ L + +R A+ +G+L L+ QP + G + +L G ++P +F+P Sbjct: 442 DATAQLSLQHDLRQAIARGELSLHYQPKIDARRGRINGVEALLRWRHPLRGNVSPAEFIP 501 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +F L A+ V+E + +A D R ++NL L + +A RI +R+ Sbjct: 502 VAERFGLIAQLGNWVIEEACRQMAAWSWDGLRMRVAINLSAYQLRESGLADRIRDALQRH 561 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + ++ EITE A + ++ IE+L + G ++IDDFGTGY++ L+ L A + Sbjct: 562 GVPASHLLCEITESVAMEDTRATQRAIEELGRIGVYLSIDDFGTGYSSLHYLRSLPARQL 621 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+D+ +V ++ LA A L VVAE VET+ Q+ +L + LQG+ Sbjct: 622 KIDRSFVRDLEEQEDARAVVDAVVRLAHALGLRVVAEGVETEGQRDILAAMHCDELQGFY 681 Query: 721 IGRPQPLA 728 RP P Sbjct: 682 FARPMPAD 689 >UniRef50_A9WJ06 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WJ06_CHLAA Length = 845 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 106/712 (14%), Positives = 215/712 (30%), Gaps = 68/712 (9%) Query: 75 NLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPI 134 L + L L TA+ + +Q VL A + L L Sbjct: 129 QLLHSALDALPTAIAILNQYGQVLAANVRWLQLGPLLGVETVDCAVGASFLAACHLGGKT 188 Query: 135 GIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPH 194 + + + F +++ + + I + Sbjct: 189 AGVIAQAIERLLHGDVTRYEDEFAVGKEARRWLEIRVVRFGSGERVR-AVVVLDDISARR 247 Query: 195 FAQILWRRDIAPSLGKEKRAFT----------LSWLAALSVLLL--LLCTPYENDFIAGY 242 A+ + ++ + + + + + Sbjct: 248 KAEQIALARRRVLELIARQYDLRTITRELLHLIGEQVPDLIYAACVVRSSNLFVSYSTSL 307 Query: 243 LVPVFFIIFTLGVGKLRYPFLN-------------------LTWAVSTLCLLNYNQN-FL 282 + L + A + Sbjct: 308 PEEAIKHLDAWAGEVLASELRPQQRMLSLRVDPSRWPVVDYILQAYAVSETWMMALRTNR 367 Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYH----RSEWLNRRWHLQALTDPLTLLPNFR 338 L + L+ + QA D LT LPN Sbjct: 368 DVDSWLLVCRQQNNPLTAEEQLLIEQFEQLSLIALEQHATLHKLAYQAHHDALTGLPNRL 427 Query: 339 ALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 E +Q + + +D + ++ G + + R ++ Sbjct: 428 LFEDRLQQAIEHARRANTMVAVLFIDLDRFKHVNDTLGHTTGDMLLIQVARRFEACIRAT 487 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGN 447 + + + G E LLVLS + ++ H+V L + N + + + + Sbjct: 488 DTIARHGGDEFLLVLSDITSPQQVTHVVRRLHEALDQPFFVNGHEIFVSASIGASLYPID 547 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L ++ H + + ++ + +++ + N +R A+++ +LLLY Sbjct: 548 GTDVIALQRAADVAMYRAKQLLHN-SFQFFDAAITDVSIERLQIENLLRRAIERHELLLY 606 Query: 508 AQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + +L + G+++P +F+P+ + L VL + + + Sbjct: 607 YQPKVDRTGQLVGLEALLRWQHPELGMVSPARFIPIAEETGLIVPIGRWVLREVARQVTQ 666 Query: 566 HPCDKKGPR--------FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 D Q + A + + + + LE+TE Sbjct: 667 WWRDGLKVVPVAVNVSVI-------QFTQADFAQTVADTVAQTALPFSWLELELTESMLM 719 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD- 676 + + +L + G +AIDDFGTGY++ L RL +++KID FV + + Sbjct: 720 GQIDDLRRQLGELRQLGVTLAIDDFGTGYSSLSYLHRLPINVLKIDRSFVARLDQDDAGV 779 Query: 677 -AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++ +I L + +VAE VET Q+ +L G QGY I RP P Sbjct: 780 ERSLITTIITLGHHLGVQIVAEGVETAGQRQILFDAGCDVFQGYHISRPLPA 831 >UniRef50_Q1QHQ7 Diguanylate cyclase/phosphodiesterase n=13 Tax=Bradyrhizobiaceae RepID=Q1QHQ7_NITHX Length = 781 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 105/741 (14%), Positives = 229/741 (30%), Gaps = 41/741 (5%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNF 79 + S F +P + + + + + + V+ V+ G + Sbjct: 22 AIYAALVGSLFQNPAPMFAGAVCAAIAAVMTALKTGNHLLWPCAVLLVMIGALRSFDMAK 81 Query: 80 HLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY---VWQRLFWLGLVTPIGI 136 + S + + + + + + + + + + T Sbjct: 82 YKSRGSDLTVAEAARWETRYQIGAVLYAIVLGAWCAIALLMTDDAVAHMICISVTTGYVA 141 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + G + F ++I G + L+ + F L R+ Sbjct: 142 AGAGRAYGRPWIFHVQILLTCGPMAGAMVLHGNPYYVGMALLTVLYFLGLERITTRLQEI 201 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIF 251 + + T + + Y + +L F Sbjct: 202 FVRALIAREREAAIAGQFDTALNNMPHGLCMFGADGRLGVMNYRFGEM-MHLADSFVHRR 260 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV---------ETEYSLAFILAVLISFS 302 + T + + Q E +L++ ++ Sbjct: 261 VGAADVIAACVAVGTMSPENGSTIISEIENSQAGAIVTADLDRERGRALSWTFQPMVG-- 318 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + +V + A D LT LPN + E+ + Sbjct: 319 GGTVVLVEDITERRKAEAKISHLARFDSLTELPNRLSFRDEIERLLAIANSESRLSALLF 378 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G + + L +++ ++ + + G E ++ ++ Sbjct: 379 IDLDQFKQINDTLGHPCGDRLLCIVADRLRGMLRPDDFVARFGGDEFVVFQQNIQSAEEA 438 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + + +++G T LL Q ++ A Sbjct: 439 AALSRRVVERLTERYEIDRHLVEIGASIGIAL-TSPGVTADNLLKQADMALYRAKAGGRG 497 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ + +L +R AL + + L+ QP+ N + +L Sbjct: 498 -TFCFFRNEMAEIVEARRVLELDLRKALAKEEFELFYQPLVNLKSGRITTCEALLRWNHP 556 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G+++P +P+ + L +L T P +VN Q++ Sbjct: 557 TRGMVSPIDIIPVAEEIGLIVDLGRWILRKACMECMTWPDA---VSVAVNFSSQQFHQRD 613 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + + +EITE N + + + QL G RI++DDFGTGY++ Sbjct: 614 VLSEVRYALEVSGLPAHRLEIEITESSLLRNTQWTHDALTQLRSAGVRISLDDFGTGYSS 673 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L +KID F++ I + ++R + L+ +SVV E +ET +Q L+ Sbjct: 674 LSYLHNFPLQKVKIDRSFLEGIDADRP-LTLLRGVARLSADLGMSVVVEGIETNEQLELI 732 Query: 709 HKLG-VQYLQGYLIGRPQPLA 728 G V QGYL RP A Sbjct: 733 SADGTVTEAQGYLFSRPVSAA 753 >UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Methylobacterium RepID=B1ZGT4_METPB Length = 574 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 100/458 (21%), Positives = 167/458 (36%), Gaps = 28/458 (6%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 + LA L S A +PLT L N L Sbjct: 109 RLVEAALAPL--SSGGFALTFEDVTELLRGAA----LARQEPLTGLCNRVGLHDRLDAAL 162 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 +A + L +D + ++ G + +R + L + + + +L G E Sbjct: 163 AEAARTDAPLAVLMLDLDRFKAVNDTLGHPVGDALLRKVAERLRKATRSGDVVARLGGDE 222 Query: 401 LLLVLSGPET----EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 ++ GP + + + L R + L++G + Sbjct: 223 FAIIQGGPSSGAEQPQAAEALARRLVDLVGRTYVVDGHMLNVGVSVGVALSPADGRNADD 282 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 LL ++ A E ++ Q + L +R AL L QP Sbjct: 283 LLKHADLALYRAKAEGRG-THRFFEPAMNAQMQARRSLEIDLRRALALKQFDLAFQPQIQ 341 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G++ +L + G ++P F+PL + L L + + A Sbjct: 342 LETGQIVGFEALLRWNHPERGPVSPALFIPLAEEIGLIVGIGEWALRTACREAAGWTQ-- 399 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 +VNL P+ + ++ + + + P + LEITE N +S + + L Sbjct: 400 -PASIAVNLSPVQFRGGRLVETVMHVLAQTGLDPARLELEITEGALLENTDSVLDVLNGL 458 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G +I++DDFGTGY++ L++ D IKID FV+ + N IVR+I L + Sbjct: 459 RALGVKISMDDFGTGYSSLSYLQKFPFDKIKIDQSFVRGMEGNAECGAIVRAIARLGASL 518 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + AE VET Q + G +QGYL GRP P A Sbjct: 519 GMRTTAEGVETATQLDAIRAEGCTEVQGYLTGRPMPAA 556 >UniRef50_Q486I4 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q486I4_COLP3 Length = 685 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 105/572 (18%), Positives = 205/572 (35%), Gaps = 32/572 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND-FIAGYLV 244 R++ ++ + A +W + + I G Sbjct: 112 SIRLLSEQELVASTMQKLHERLEFSQSLAHVGTW---DWDITNETLAWTDETYRIFGVKP 168 Query: 245 PVFFIIFTLGVGKLRYPFLNLT-----WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 F + + + A++ + ++ + VL Sbjct: 169 QEFKATYEAFLFYIHADDRQAVIDAVNDAINNDSSYSIKHRVIRPSGEIREVLEKGQVLR 228 Query: 300 SFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEA 348 + ++ V + A D T LPN + E Sbjct: 229 DENGKASRIIGAVLDITELNQSKEKLEKLAHYDEKTQLPNRVLCRKEIEIRISHALLNNK 288 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D+ + ++ G + + + + LL ++ + L L G E +++ Sbjct: 289 KFAILFIDLDHFKNINDTQGHLAGDEFLHEMSQKLLTIIPKGMFLAILGGDEFIIITDYS 348 Query: 409 ETEGRLQHMVNILNSRQIHW-------NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + E +++ V L + I N +D+ + + LL Sbjct: 349 DDEEEIKNKVTRLAKQLILLIPTKKSYENFSIDITASIGIALYPNHGNNFTSLLSSADNA 408 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEG 518 Q + + +++ L++ +RT L +G ++ Q ++ + G Sbjct: 409 MYQVKNTGRN-NYAMYHPDIEQKRLRELQLISDMRTGLKKGQFTVHYQAKQSLKTDELIG 467 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSV 577 + ++ + G + P +F+ L L VLE ++ K SV Sbjct: 468 CEALIRWQHHTLGNIPPLEFISLAESSGLIIPIGKFVLEQSCLFIKQWQAHSDKSLVVSV 527 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ L L ++++ IS + LE+TE N E+++ + L + G I Sbjct: 528 NVSALQLKDPLFKEEVLQVINSAGISGHNIELELTESLLMENIEATIQTLHDLKEIGVSI 587 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 +IDDFGTGY++ L++L D +KID F+ + ++ D IV + LA L VAE Sbjct: 588 SIDDFGTGYSSLSYLQKLPVDTLKIDKSFIDSLSSSDEDTWIVINTISLASGLKLKTVAE 647 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VETQ+Q+++L LG LQGYL +P P + Sbjct: 648 GVETQEQKSILADLGCDILQGYLYSKPIPKNE 679 >UniRef50_Q2RVK9 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RVK9_RHORT Length = 917 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 109/606 (17%), Positives = 208/606 (34%), Gaps = 34/606 (5%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR---MIVSPHFAQILWRRDIAPSLGKEKR 213 + + I + L L +L+++ R + + + + Sbjct: 290 WYETRNISLLFVAFFLSLFYLSLFILYFFWRRQKEDATRLRESNEQTQTVLRTLRESDNA 349 Query: 214 AFTLSWLAALSVLLLLLCTP---YENDFIAGYLVPVFFIIFTLGVGKLRYPFLN------ 264 + LS +L L + A + + L YP Sbjct: 350 LAAACEVGGLSTFILDLSANLWMRSPEQEAIFGLDGRHPRTRDAWHALIYPEDRGGVLDY 409 Query: 265 -LTWAVSTLCLLNYNQNFLQG-VETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLN 319 + ++ + + + L+ ++ + Sbjct: 410 FAERDALDTGEFDIQYRIIRPSDGAVRWIHGAGKLERAEDLSVRRLVGAIKDVTEIKEDL 469 Query: 320 RRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMM 371 R A D LT LPN L ++ + C L +D+ + ++ +G + Sbjct: 470 DRTEFLAYHDSLTNLPNRLLLADRMGQALALAVRRQDLLAVCYLDLDSFKPINDTWGHSV 529 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW 428 + + R L + + + +L G E +++L G + E ++ +V + + Sbjct: 530 GDALLIEVARRLQQNARAEDTVARLGGDEFVVLLCGFKAEAEVERVVRRMMDSIATPYSV 589 Query: 429 NNTGLDMGYGAAWGRFDGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + + F + E L+ ++ + + + Sbjct: 590 GGRQVTLTVSMGITTFPRDAEQEADALIRHADQAMYEAKRQGRNR-IHYFDAEKDRLHKE 648 Query: 488 QVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + N + AL+ + L+ QP + + G + ++ + G++ P FLP I Sbjct: 649 RQTYYNRMVAALEANEFQLHYQPTIDLVSGVFSGVEALIRWRHPERGLLLPGAFLPDIED 708 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HIS 603 +L+ +L L+ VNL L Q + R + + + Sbjct: 709 TDLTVPLGEWILREALRQKERWQDMGLSLTVGVNLFGYHLQQDSFVARFAAILAEFPAVH 768 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ V LEI E A + + + +FG A+DDFGTGY++ +RL +KID Sbjct: 769 PEEVTLEIVETTAMRDLAAISEKMWDCKRFGVDFALDDFGTGYSSLTYFRRLPVTHLKID 828 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV DI+ N D +V+SI ++ A VVAE ET A L + G + QG+ I R Sbjct: 829 RSFVTDILENAQDQAMVQSIVAMSHALGRKVVAEGAETLAHCAALGRYGCDFAQGFGIAR 888 Query: 724 PQPLAD 729 P P D Sbjct: 889 PMPGED 894 >UniRef50_A3YI96 Sensory box/GGDEF family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YI96_9GAMM Length = 806 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 101/560 (18%), Positives = 209/560 (37%), Gaps = 36/560 (6%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVF---FIIF 251 + + + + A ++ L + + G + Sbjct: 232 LESTLKALERSDAHSKAIISQAGDAIFLSDMEGQITLVNKAAVKMVGIDEQELTHSNLRS 291 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI-LAVLISFSVCLLYMVR 310 + +L L + + + ++ S+ +L + R Sbjct: 292 LHAEETWVSFYQDLVKQPLDT-PLTIETLYRHSSGAVTPIEIRLIKYVLQESIEVLILAR 350 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEF 362 + + + A D LT LPN + + E ++ + L +D + Sbjct: 351 DISARKEAEDKINHLAYFDSLTHLPNRHWIMERLESSMEISRERKVKGAVLFLDLDRFKN 410 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEK-LYQLPGSELLLVLSGPETE-----GRLQH 416 ++ G + ++ + ++ E + + +L G E + + E + ++ Sbjct: 411 INDSLGHDVGDLLLQVVANDFK-VLAEGDICVARLGGDEFVFLFPFLEGDLDYINEKVAF 469 Query: 417 MVNILNSRQIH----WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + + + + FDG +E + LL Q ++ Sbjct: 470 FAQQIV-QSFNKSKFVGSHEMHISVSIGITLFDGFEENVGVLLKQADTALYKAKDAGRN- 527 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKEGEGYDEILARLKYDG 530 + + T ++ L + A+ + LY QP E G + ++ D Sbjct: 528 TYRFYKAEMQVLTDDRLKLEKALHRAITHNEFELYYQPQNNVKGELLGAEALIRWHDGDN 587 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNLMPLTLLQK 587 G + P +F+PL + L V+E+ L+ S+N+ P+ Sbjct: 588 GFIPPAQFIPLAEEIGLIIELGEWVMENAFYQLSQWLKRDLWKPDWTLSINVSPIQFQHP 647 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + RL +Y+I + +EITE ++ ++S +E + G +++IDDFGTGY+ Sbjct: 648 EFLINLERLLLKYNIPATLIDIEITENMLLTDLQASRLKMEHIRSLGMKLSIDDFGTGYS 707 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + + LK L + +KID FV+D++ ++ D IV ++ ++ A + V+AE VETQ+ Sbjct: 708 SLQYLKTLPIERLKIDQSFVRDLLIDSGDEAIVGAVIAMSGALDIEVLAEGVETQEHLLR 767 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 L ++G QGYL GRP Sbjct: 768 LEEMGCLNYQGYLFGRPVSA 787 >UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Burkholderiales RepID=D0J3T4_COMTE Length = 728 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 131/717 (18%), Positives = 251/717 (35%), Gaps = 64/717 (8%) Query: 36 IIHSSYIFLAWMPLCVMLSILFIFG-----WRGVVPVLCGMFCTNLWNFHLSFLQTAVML 90 + +F +++ L + + G W + ++ G + + + + L Sbjct: 25 VSIVIAVFASFVTLGLARRMRMASGRIGRIWWAIGAMVMGTGVWAMHFIGMQAFELPITL 84 Query: 91 GSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFP 150 G + L + + + Y W L+ GI YL + Sbjct: 85 GYSGALTLASWVAAVAASALAFGVATRAEYRWPHFLGASLLMGGGICAMHYLGMLAIEMS 144 Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 + I+ + A + L S L + R+ + +A Sbjct: 145 IPIAWDWPLVAASALIAVLASATALTLFRALFSLSGKRL---------WLFQTLAAL--- 192 Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS 270 + ++ + F +G + G + +T + Sbjct: 193 ---------VMGFAICGMHYTGMSAASFASGS----VCLSAEALSGPELTTIIIITTVML 239 Query: 271 TLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + + + T + L L + + N +A DP Sbjct: 240 LIAAMFSTLLDARLQSTAFKLNQSLQEANAK-------------LQLANTELRQRAFADP 286 Query: 331 LTLLPNFRALEQAP-------------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 LT LPN E + + +D + ++ +G + Sbjct: 287 LTNLPNRLLFEDRLIHALLRLERANRSRTKERLGILFVDLDGFKPINDSFGHAAGDQILV 346 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 S L+ + ++ + ++ G E L++L + + N + S+ N L Sbjct: 347 SAAERLMAEARSSDTVARVGGDEFLVLLEDTQDVAACMAVANRILKALSQPFRLGNKELQ 406 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + F + L+ + + E + ++Q+ L N Sbjct: 407 ITCSIGIVAFPDHG-DRDHLIANADAAMYAAKRNGGN-GFAVFEPHMGSDASEQLELQND 464 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R A+ +G + L+ QP + G + +L + G++ PD F+PL +F + Sbjct: 465 LRHAIQRGQMELHYQPKIDSERGNIIGVEALLRWAHPERGMIAPDIFIPLAERFGIINSL 524 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+E + LA R ++NL L + +A RI + R+ + ++ EI Sbjct: 525 GNWVIEEACRQLALWRDMGLQMRVAINLSVHQLRESGLADRITQTLLRHDVQASQLLCEI 584 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE A + +++ IE+L G ++IDDFGTGY++ L++L A +KID F++D+ Sbjct: 585 TESVAMEDTQATQRAIEELRDIGIFLSIDDFGTGYSSLNYLRQLPAQQLKIDRSFIRDLE 644 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 T +V ++ LA A L VVAE VET Q+ +L + LQGY RP P Sbjct: 645 TEEDARAVVHAVVRLAHALGLRVVAEGVETAGQRDILIDMQCDELQGYFYARPMPAD 701 Score = 83.9 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 82/318 (25%), Gaps = 11/318 (3%) Query: 5 HNLIKNIKIFTLAFTLTVVL-IQLSRFISPLAIIHSSYIFLAWMPLCVMLSIL------- 56 ++ ++ + F + ++ S + S +A L ++ Sbjct: 59 GAMVMGTGVWAMHFIGMQAFELPITLGYSGALTLASWVAAVAASALAFGVATRAEYRWPH 118 Query: 57 FIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL 116 F+ + +C M + +S ++ A R + L Sbjct: 119 FLGASLLMGGGICAMHYLGMLAIEMSIPIAWDWPLVAASALIAVLASATALTLFRALFSL 178 Query: 117 TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAV 176 + + +W LV I Y S F +A + + ++ + T + Sbjct: 179 SGKRLWLFQTLAALVMGFAICGMHYTGMSAASFASGSVCLSAEALSGPELTTIIIITTVM 238 Query: 177 LIYNMLFYYLT--RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY 234 L+ +F L R+ + + A ++ L+ L L Sbjct: 239 LLIAAMFSTLLDARLQSTAFKLNQSLQEANAKLQLANTELRQRAFADPLTNLPNRLLFED 298 Query: 235 ENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFI 294 L +G L + +Q + E + A Sbjct: 299 RLIHALLRLERANRSRTKERLGILFVDLDGFKPINDSFGHAAGDQILVSAAERLMAEARS 358 Query: 295 L-AVLISFSVCLLYMVRI 311 V L ++ Sbjct: 359 SDTVARVGGDEFLVLLED 376 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 25/256 (9%), Positives = 62/256 (24%), Gaps = 18/256 (7%) Query: 2 FVEHNLIKNIKIFTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVML--SILFI 58 F+ +L+ I + + + + + + S+ I + + L ++ + Sbjct: 119 FLGASLLMGGGICAMHYLGMLAIEMSIPIAWDWPLVAASALIAVLASATALTLFRALFSL 178 Query: 59 FGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTS 118 G R + + + + A L+ Sbjct: 179 SGKRLWLFQTLAALVMGFAICGMHYTGM-------------SAASFASGSVCLSAEALSG 225 Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 + + ++ I S L K++ +A+A + + Sbjct: 226 PELTTIIIITTVMLLIAAMFSTLLDARLQSTAFKLNQSLQEANAKLQLANTE--LRQRAF 283 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 + L R++ L R + A ++R L + D Sbjct: 284 ADPLTNLPNRLLFEDRLIHALLRLERANRSRTKERLGILFVDLDGFKPINDSFGHAAGDQ 343 Query: 239 IAGYLVPVFFIIFTLG 254 I Sbjct: 344 ILVSAAERLMAEARSS 359 >UniRef50_Q2SLT6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLT6_HAHCH Length = 928 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 109/597 (18%), Positives = 225/597 (37%), Gaps = 26/597 (4%) Query: 153 ISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR-MIVSPHFAQILWRRDIAPSLGKE 211 I T + + S + +I M +IV + + Sbjct: 312 IRTNIDETSWHLLLSVKQSTIRSAIIEQMTPEMALAGLIVLFAALIQRYFLTAGQLESSQ 371 Query: 212 KRAFTLSWLAALSVLLLL------LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 +R + ++L + G+ + I + + Sbjct: 372 RRYRQMFEHCDAVQIILDPTNNKVIDANPAACDFFGFSSEMMGNISASRLFLSENNEMLG 431 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHL 324 + +L +G + ++ + + L +V + + L Sbjct: 432 ENWLPSLQSGKTVIAARRGDNRSSLVEMYVSDIKDKASSYLYLIVHDITDRKRSEEQIRL 491 Query: 325 QALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA DPLT LPN L + ++A + + +D + ++ + G + + Sbjct: 492 QAYYDPLTRLPNRSYLFEHLNSLIASHKREQARLAVLFIDLDRFKQVNDNLGHGVGDKLL 551 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGL 433 + + L ++E++ L +L G E +VL E H+ +L + + L Sbjct: 552 QQVSTRLKSRLRESDMLARLGGDEFTVVLPHLREETDAIHVAKMLLQQLADSFSVGDYEL 611 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 +G F + E L+ ++ + EE ++ +++L Sbjct: 612 HIGASIGVTLFPKDGEDASTLIKNADIAMYKAKDNGRNQ-YRFFEERMNEAVASRLMLEG 670 Query: 494 TIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 IR A L QPI + G + +L L G + P +F+ + + + Sbjct: 671 DIREATQNEQFHLEFQPIIDLKNMRLAGAEALLRWLHPRFGELHPREFMSIAEETGNIVQ 730 Query: 551 FDLQVLESLLKWLATHP---CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 +L++ L A + P +VN+ L+ R + ++ + P ++ Sbjct: 731 ISEWLLQNALNLAAEWQYSRPAGQQPFIAVNMSRRQLISSQHIKRWRDIIRQSEVPPSSL 790 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 +LE+TE + E S + +LH+ G R+++DD+G G ++ LK L ++K+DG+ + Sbjct: 791 VLELTEHNLLNEFEESRRCLIELHQMGVRLSLDDYGHGASSLTLLKDLPISMLKLDGLLI 850 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +++ T + +++ ++ + +A + +VAE VET QQ A+L + G Y QGYL P Sbjct: 851 RNLGRQTKEEVLMDALVKMGRAMDMKIVAEGVETPQQLAVLRESGCDYGQGYLFSPP 907 >UniRef50_Q315P5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q315P5_DESDG Length = 595 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 114/552 (20%), Positives = 192/552 (34%), Gaps = 32/552 (5%) Query: 209 GKEKRAFTLSWLAALSVLLLLLCTP-----YENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 KE+ L +A + + C I GY + + L Sbjct: 29 EKEQLFRVLLEYSADCEIWIDACGVVRFVSPSFASITGYTPECLYRNPDYLAAIMVQSDL 88 Query: 264 NLTWA-----VSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCLLYMVRIYHRS 315 A + E + + R R Sbjct: 89 PAFRAQERILAERGGSFDVEVRIRTASGRECWVLCICRSITDDEGRPQGRRLTCRDVTRR 148 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPE---QEAGKS------FCCLRIDNLEFMSRH 366 L + QA DPLT LPN + + + + +D + ++ Sbjct: 149 RLLAMQLQHQAGHDPLTGLPNRSLFLEKLDARVNGGRAARDGGASVVMIDVDRFKQINDV 208 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G +R + L ++ N+ L +L G E L+L+G + V + R Sbjct: 209 LGHEAGDGVLRVVADRLRGILGGNDALCRLGGDEFCLLLAGGGRAEEVLARVQQIQQRLM 268 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + L + Q + ++ + + L+ + + Sbjct: 269 DSVDTGGRRLHLTVSVGVATHRPGQNAPEDMMRNGGIALQHAKRAGGG-GLEVFSDWMLE 327 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 L + AL L QP+ + + + G ++P F+P Sbjct: 328 SALNHARLEMELHHALKDNAFHLEFQPLVDLHSGRPVRVEALARWDHPQRGAVSPADFIP 387 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR---FSVNLMPLTLLQKNIAGRIIRLF 597 ++ + R VLE+ A R SVNL L Q + ++ + Sbjct: 388 VLEETGQILRLGSWVLENACMAAARWQRRHPELRSVGVSVNLSARQLAQPALVDQVAAVL 447 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 R + P ++ LE+TE N E S + +L G +AIDDFGTGY++ L+ Sbjct: 448 SRSGLEPASLKLEVTETMLMDNPELSNLVLRRLKDLGVFLAIDDFGTGYSSLAYLQSFPI 507 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV + ++ IV+++T LA + L VVAE VE Q+Q+ +LH +G +Y Q Sbjct: 508 DTLKIDKSFVMGMTSDPGKFNIVKAVTALAHSLGLDVVAEGVEEQEQRIMLHAVGCEYAQ 567 Query: 718 GYLIGRPQPLAD 729 G+L RP P D Sbjct: 568 GFLFARPVPEKD 579 >UniRef50_C5V1X8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1X8_9PROT Length = 714 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 105/435 (24%), Positives = 194/435 (44%), Gaps = 20/435 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSR 365 ++ + A D LT LPN L +Q + + +D + ++ Sbjct: 272 ELRQAAKKINELAFFDQLTGLPNRVLLLDRLKQAMSASTQNRCHIALLLIDLDKFKTINE 331 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-----RLQHMVNI 420 G M ++ + L ++ + + +L G E +++ + T + +++ Sbjct: 332 TLGHDMGDQLLKQVAERLSHCVRSGDTVARLGGDEFVVMSANLNTHEALAATQAENIGEK 391 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + R H++ F G Q ++ LL Q +S AL Sbjct: 392 ILAALNRTYHFDAIPHHSTPSIGVTLFCGEQTDVEILLKQAELAMYKSKEAGRN-ALHFF 450 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-NKEGEGYDEILARLKYDGGIMTPD 536 ++ + + T+ + N +R A+ Q +L+ QP +++ G + ++ K DG +++P Sbjct: 451 DQDMETKVTRYANMENDLRVAVQQQQFILHYQPQIADQQLTGVEALVRWQKPDGSMVSPA 510 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRII 594 F+P+ + L L VLE+ + LA ++ +VN+ Q + +++ Sbjct: 511 DFIPMAEETGLILPLGLWVLETACRQLAIWANQPERAHLTIAVNVSAHQFRQADFVDQVL 570 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + K +P + LE+TE +N E + + L G ++DDFGTGY++ LKR Sbjct: 571 EVIKNSGANPHRLKLELTESLLLTNVEEIIEKMIALKLTGVSFSLDDFGTGYSSLSYLKR 630 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +KID FV+D++ + DA I R+I LA++ SL V+AE VET+ Q+A L Sbjct: 631 LPLDQLKIDQSFVRDVLIDPNDAAIARTIITLAQSLSLGVIAEGVETEAQRAFLASADCH 690 Query: 715 YLQGYLIGRPQPLAD 729 QGYL +P + D Sbjct: 691 AYQGYLFSKPLRIDD 705 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 596 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 114/634 (17%), Positives = 217/634 (34%), Gaps = 50/634 (7%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 L + L S + + + V + L L R + Sbjct: 3 LYVTTPRPRLGHSMVRANMAGAGAALTIAGFLLIVFQFIALHAALVRDVHVQARIVGANS 62 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + TL L A L +A Y + LR Sbjct: 63 VAALLFNDRRAAEETLGALEASPSLRAAGIFSALRKPLALYQHGDAAPVRAPDAAMLRES 122 Query: 262 FLNLTWAVSTLCLLNYNQNFL-----QGVETEYSLAFILAVLISFSVC-------LLYMV 309 ++ + + + + + + +E + + +++ SV L + Sbjct: 123 AVSTLTTLEVVEPVESERRVIGYVVVRSSLSELYMQLLGYAVLTVSVGIGAMGLAYLVIA 182 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-------QEAGKSFCCLRIDNLEF 362 R+ A D +T LPN A + + Q L +DN + Sbjct: 183 RMRRAVLQAEAHLDYLAHIDSVTELPNRHAFNERLQVSLKRAGQTGAVGLLLLDLDNFKV 242 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQE---NEKLYQLPGSELLLV--------LSGPETE 411 ++ G +R + R L ++++ L ++ G E ++ ++ E Sbjct: 243 VNDTLGHNNGDRLLRQVARRLNDVIEQANLRAVLCRIGGDEFAVIAELSGRAQIAETEAA 302 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + + + + +Q L + H Sbjct: 303 TLADGLAKRILAALGAPFSLDLHQIYVTASVGVSLYPHDARDVQVLTRNADTAMYHAKNH 362 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-----NKE-------- 515 A S + Q +++ + +R ALD+ +LLL QP + Sbjct: 363 GKNAA-ASFTSEMDQQARRRLRVEADLRRALDREELLLAYQPQVRLSTDDAHDAVISRAN 421 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPR 574 G + ++ + G++ P +F+ + + L L VL + + D R Sbjct: 422 VYGVEALVRWRHPEIGLIGPGEFIAVAEETGLIVPLGLWVLRTACQQAVRWMREDGVTLR 481 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VNL + ++ + + + P + LEITE + E+++ +E LH G Sbjct: 482 VAVNLSARQTRDPALVENVMDVLRETGMPPHQLELEITESVLMEDIEANIALLESLHAAG 541 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++IDDFGTGY++ L+R +KID FV+ + + I ++ +A + + V Sbjct: 542 ISLSIDDFGTGYSSLAYLQRFPIQKLKIDRSFVQRMPGDGE--AIAGAVIAMAHSLRMQV 599 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VAE VE +Q ALL G QGYL RPQ Sbjct: 600 VAEGVEDPEQLALLRDAGCDLGQGYLFSRPQQAD 633 >UniRef50_D2LTE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LTE4_BACS4 Length = 716 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 114/591 (19%), Positives = 205/591 (34%), Gaps = 27/591 (4%) Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP----SLGKEKRAFTL 217 +I+ V + +F + I + R+ I + + Sbjct: 120 SIYWVKATIYPIYNKEGKIDMFLSIRLDITEGKIYEEKLRQIIEKDYSTIIKNIQNFIIR 179 Query: 218 SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 + ++ L + I +G R + + Sbjct: 180 VLPSNDKGPVVSLLEGHLAKVIGIDTEKAKNKPIGEVIGNSRDKDIITSRFKQAFEGQKV 239 Query: 278 NQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 +F G L + +I + + ++ + + A D LT LP Sbjct: 240 EFDFKHG---YRILHASITPIIHCNEVIEVIATINDITELKNSELAVKNMAYHDALTGLP 296 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R LE+ Q+ S + +D ++++ G + I L L Sbjct: 297 NRRILEEDLMYRLVDAKTQQKKASLIIVDLDKFKYINDTLGHNVGDRFIMMAAERLQTLT 356 Query: 388 QENEK----LYQLPGSELL-LVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWG 442 +N LY L G E +++ E + + L ++ N Sbjct: 357 FDNHVEYFRLYHLGGDEFAWIIIGPDEHVCIVTRQILTLFDEPFYYRNGEFHQKASIGVS 416 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL-DQ 501 F + + L+ + + +VL+ + +R A+ Sbjct: 417 VFPEHATNPEELMKAADMALLSAKHAGGN-TFRKFNSQMKNVFVSKVLMEDDLRQAIIAN 475 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 L+ QP+ + ++ + ++ G++ P F+P+ + L V+ Sbjct: 476 NQFELFYQPVMDVKQQKINSCEALIRWYHPKKGLINPADFIPIAEETGLIIPLGEWVIRQ 535 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + L + SVN+ L Q + R+ + + P + LEITE Sbjct: 536 ACRDLKRWEESQIHLNISVNISAYQLKQSDFVERLTTIVSDERVLPNRIQLEITENGLME 595 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N S+ +++L + GF IAIDDFG GY++ LK+ + +KID FVKDI ++ D+ Sbjct: 596 NTTDSINTLQKLKQIGFTIAIDDFGIGYSSLSYLKQFPVNCLKIDRSFVKDIPSDNSDSA 655 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV S+ L K L VVAE VE Q+ L + YLQGY +P D Sbjct: 656 IVSSVVKLGKDLGLLVVAEGVEGQEASDYLSSIECPYLQGYYYSKPIKFED 706 Score = 70.8 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 6/125 (4%), Positives = 25/125 (20%), Gaps = 6/125 (4%) Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPF 262 + L ++ ++GY + + Sbjct: 36 QLEELLRAFDHSCILVLTDSSGSIIEVNDTYCQVSGYSRDELVGNTHRLVHSGYHTQEFY 95 Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLN 319 L + + + + + Y + + + + L + + Sbjct: 96 HKLWQTIMNGDIWSGEIKNRKKDGSIYWVKATIYPIYNKEGKIDMFLSIRLDITEGKIYE 155 Query: 320 RRWHL 324 + Sbjct: 156 EKLRQ 160 >UniRef50_C5BI93 Motility regulator n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BI93_TERTT Length = 897 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 102/591 (17%), Positives = 200/591 (33%), Gaps = 22/591 (3%) Query: 154 STFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP-HFAQILWRRDIAPSLGKEK 212 + L++F + + S A+ S Sbjct: 288 EAQAARRADGTEFMVDLTIFRHTHGTERYTVLQIQDVTSRLQRAEAHLETSQQLSALTHL 347 Query: 213 RAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 + + YE + + I L ++ L A+ Sbjct: 348 VPVAILRVDTHWNCAFANDRWYEFSGLTFDEINQTGWINALHRDDVKTTLEELRSALKVG 407 Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTD 329 L + V VL L R A D Sbjct: 408 HNLKREVRLVSPVGQVRWTEMNTQVLFDERGAILGFLATFADITERYIHQERLRHVAEYD 467 Query: 330 PLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT L N + + + L +D + ++ G + ++ + Sbjct: 468 SLTGLANRYLFQDRLKQAFFNSEREGSEVVVMFLDLDGFKIVNDSLGHAVGDKLLKKVGE 527 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 LL +++ + + + G E +++L+ E + + + + + ++ + + + Sbjct: 528 RLLNILRRVDTVARFGGDEFVILLNPHEKQLDVAEVASKIIQSLAQTYQIDGNEICVTSS 587 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + L+ Q + + E + + K+V + R+A Sbjct: 588 IGISGGTAKNSSPEKLMKQADAALYLAKSEGKN-NFQLFNEALDKEAKKRVFMARQTRSA 646 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L L QP+ N KE G++ ++ G + P F+ ++ + V Sbjct: 647 LRHKRFFLEYQPLANISRKEIVGFEALIRFKDEMGRCVYPGDFIAILEESGAIVEAGNWV 706 Query: 556 LESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 ++ + L+ + S+N+ P L ++ I+ +R+ I PQ + +E+T Sbjct: 707 IDEACRQLSQWHAQQLFPLDGFMSINVSPKQFLDDSLLDSILGSCERHCIRPQCLTIEVT 766 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + QL + G R A+DDFGTGY++ L++ D +KID FV ++ + Sbjct: 767 ESVLIDKPAKIQRTMSQLKEQGIRFALDDFGTGYSSLTYLQQYPFDHLKIDKSFVANLGS 826 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 + A I +SI L K+ L+V AE V + +L G Y QGY +GR Sbjct: 827 DENSAKITKSIIALGKSMGLTVTAEGVADEPTLNILSAYGADYYQGYFLGR 877 >UniRef50_Q2N9U4 Sensory box/GGDEF family protein n=5 Tax=Sphingomonadales RepID=Q2N9U4_ERYLH Length = 740 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 95/542 (17%), Positives = 193/542 (35%), Gaps = 32/542 (5%) Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF---TLGVGKLRYPFLNL 265 E + LS A ++ I L +F + G + P L Sbjct: 50 DSESKLIYLSENA------AAQFGCSADELIGKPLSELFILERGEEEKGEQSPQRPLPFL 103 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRW 322 A +T+ L + + + + + + + + Sbjct: 104 LRARNTISDLPVRISIGESDDRKIWWSISGKPQLDGNGDLLGYRGSAKDITAVRQNQLEV 163 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT L N + + + + L +D + ++ G Sbjct: 164 GRMAQYDSLTGLANRHRMTKRLTTTLTAYKAAKRSCALMMLDLDRFKQVNDTLGHPAGDE 223 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNT 431 ++ + + L ++ N ++ +L G E ++L E GRL + + S+ + Sbjct: 224 LLKQVGQRLERIIGGNGEIGRLGGDEFQVILPDIEDRGRLGEVAARVIQMISQPYSIDGA 283 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 +G + + L+G + + + + Sbjct: 284 RAIIGTSVGIAIAPYDGIDTEELVGAADLALYAAKGGGRGQ-YRFYSSELKDGARHRREI 342 Query: 492 LNTIRTALDQGD-LLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 +R AL L ++ QP+ + + ++ ++ + G ++P F+P+ N Sbjct: 343 EEDLRDALSMDQGLEMHYQPLVDAKTHRVKCFEALIRWNHPERGWISPGDFIPVAEDTNQ 402 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 VL + ++ P +VN+ + N+ + + K + P+ + Sbjct: 403 IGDLGEWVLRRVCTDASSWPG---DISVAVNVSAVQFGDPNLPQIVCKALKDSGLDPRRL 459 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LE+TE + ++ L K G +A+DDFGTGY++ LK D IKID FV Sbjct: 460 ELELTESVFIGDPNATHDMFVALKKLGVALALDDFGTGYSSLGYLKNAPFDKIKIDQSFV 519 Query: 668 KDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + + ++ I+ +I LA A +++ VAE VE + L+ + G Y+QG++ + P Sbjct: 520 RGSTENDNNNSAIITAIVSLAGALNMTTVAEGVEAMDELELVRERGATYIQGFIFSKAIP 579 Query: 727 LA 728 Sbjct: 580 QD 581 >UniRef50_B3PCW8 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCW8_CELJU Length = 850 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 111/600 (18%), Positives = 213/600 (35%), Gaps = 44/600 (7%) Query: 169 LLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL 228 L L + L L R++V A E ++ ++ Sbjct: 235 TLYLDASFLPIKNKQGKLERVLVQLQDLSREL-YARAALQESETSYKAFITNSSEAIWCY 293 Query: 229 LL-------------------------CTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 + + + + G Y F Sbjct: 294 DMQPRVDTGLPIAEQVEQIAASAHLVEANRVLLNMLGVETLDDVLGQPLSESGSTNYLFD 353 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL--ISFSVCLLYMVRIYHRSEWLNRR 321 T+ + +++++ ++ + + + + + + Sbjct: 354 LDTFIANGYQMVDHDITRQDERGKKFYFQISCTGIIEDGYLRRIWGTTKDVTTRKRYEDK 413 Query: 322 WHLQALTDPLTLLPNFRALEQAP------EQEAGK-SFCCLRIDNLEFMSRHYGLMMRVH 374 Q+L D LT LPN L Q + + +D + ++ G + Sbjct: 414 LRHQSLHDSLTGLPNREKLYQDMASCFEQRTAEQISALMLIDLDRFKEINDTLGHNVGDR 473 Query: 375 CIRSICRTLLPLMQEN-EKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNN 430 ++ I L M E + +L G E + L + + + + +++ Sbjct: 474 LLQMIGPRLAAEMAEVPGTVARLGGDEFAVFLPRIRSTHQAVVFGHRILDALAQEYDLEV 533 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 M + L+ + + L L + K++ Sbjct: 534 FCTQMSASIGIAIAPYQAQDHHALMRYADIAMYYAKSQM--LGLSIYSPDYDPHSPKRLA 591 Query: 491 LLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 +++ + A+ + L LY QP G++ ++ + + G + PD F+P+ +L Sbjct: 592 MMSELGRAIRENQLCLYYQPKVVLDECRCYGFEALIRWIHPELGFVPPDDFIPIAEFTSL 651 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 VLE+ ++ +VNL L+ +NI + RL +Y + + Sbjct: 652 IHPLTAWVLENSIEQCRHWQLQGLNLSVAVNLSARNLMDENIPKLVERLLNKYQLPAARL 711 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE S+ ++ ++ LH+ G ++IDDFGTGY++ LKRL +KID FV Sbjct: 712 ELEITESSIMSDPNRALRILQHLHELGVHLSIDDFGTGYSSLAYLKRLPVQTLKIDNSFV 771 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++++ + D +IV S LA L+VVAE VE ++ LH +G +QGY IGRP + Sbjct: 772 RNMLGDLQDELIVNSTIHLAHNLGLTVVAEGVENEELMKRLHDMGCDEVQGYFIGRPMTV 831 >UniRef50_D0SWD2 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWD2_ACILW Length = 859 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 110/601 (18%), Positives = 211/601 (35%), Gaps = 28/601 (4%) Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 + +DL +L + R I + R Sbjct: 250 HYELPIYNVAGDILWLDLTNLPIIQNQKVTGIIGIARDITVSRENKESLRLLKRGVEASP 309 Query: 212 KRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI---IFTLGVGKLRYPFLNLTWA 268 ++ ++ +++ + GY F G L A Sbjct: 310 NSL-FITDVSEERLMV---YVNPAFLKLTGYTAAEVLGQSCFFLQGPDTDPDQIALLKQA 365 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQ 325 V + + + + + + L + + Q Sbjct: 366 VKEQKEIQVTIKSYCKDSSWFWNRLTIGPIFDQTGTCTHFLGIQEDITQQRIHEEYIQHQ 425 Query: 326 ALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 D LT LPN A +Q E + +D+ + ++ G ++ ++ Sbjct: 426 HTHDHLTGLPNQYAFKQILENIFEAQHESSQPLVLLYIDLDDFKNINDSLGHLVGDQILK 485 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 + L +Q N L + E +L+LSG + ++ + + S + + Sbjct: 486 IVGERLQKFVQGNNVLCRFAEDEFILLLSGTDEHTEVEAIAGEILDLLSMLFIVDQYKIH 545 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM-VSGQTT-KQVLLL 492 + D + L+ Q +++ + E+ + L Sbjct: 546 LSASIGIVADDSSIHHSSELIYQSVLAMQEAKRQGRNM-WQWYEKTRMQPVAEIDYTNLR 604 Query: 493 NTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 + A++Q + L+ QP+ G + ++ G ++P F+PL + Sbjct: 605 LELMEAINQENFDLFYQPLVHPETGLVTGVEALIRWCHPQQGYISPAIFIPLAERTGQII 664 Query: 550 RFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VLE +A SVN+ PL + + + + P+ + Sbjct: 665 SVGQWVLEKACLDIAEWNKTHNSQITVSVNISPLQFRRAGFLQVLEHALELSQLPPELLK 724 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 +EITE + A+ ++ ++ + G ++AIDDFGTGY++ L+RL + IK+D F++ Sbjct: 725 IEITEGVIINGADRTIEILKAVRALGVQVAIDDFGTGYSSLSYLRRLPINQIKLDRSFIE 784 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + DA IV+SI LA L VVAE VET Q +LL++ G LQG+ +P PL Sbjct: 785 ELTLDGQDAAIVQSIIHLAHQLDLEVVAEGVETFSQASLLYQQGCDLLQGFFYAKPAPLN 844 Query: 729 D 729 + Sbjct: 845 E 845 >UniRef50_C5D2S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C5D2S1_GEOSW Length = 676 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 99/557 (17%), Positives = 206/557 (36%), Gaps = 32/557 (5%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEND----FIAGYL-V 244 ++ ++ ++ + +L+ LL P + I Y Sbjct: 112 RDVTKEKKLERALEESKQHFQLIAEHSTDYILIFSNKRELLYIPSSLEKVGTAIHQYSYE 171 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV- 303 + + + + F L T + +++ Sbjct: 172 DILQFVHPDDLPNIVRKFDELYRTYDTQIA---EFRKRDNEGKWIWMEAQGKAIVNEQNE 228 Query: 304 --CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP----EQEAGKSFCCLRI 357 ++ V+ + + A D LT + N E+ E + + C L Sbjct: 229 LDYVIVTVKNIGERKKYEEKLRQLAYFDSLTGIANRSYFERYIKQLIESQTDFALCYLDF 288 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D ++++ H+ + ++ R + +++ + ++ G E +L+L T+ + + Sbjct: 289 DKFKWINDHFSHQAGDYFLQEAVRRVQSVLRTEDFFARIGGDEFVLLLPNI-TKEEVTKL 347 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + L + ++ + F + + ++ ++ Sbjct: 348 ADELVQTFHKPFYYEKQLIQSTLSMGIAFFPKDSDRIEQVMKYADQALYNVKKRGKN-GY 406 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 + + + + + A+ + L QP + G + +L G Sbjct: 407 EFYRPTQNRKAI----IEQDLPFAILREQFYLCYQPKIKLDSGATMGVETLLRWRHPSLG 462 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 + P F+PL Q L VLE + + G + +VNL P L + + Sbjct: 463 EIPPLDFIPLAEQSGFIFEITLWVLEHSCRQVKEWQTQFPGLKLAVNLSPFLLNRTELVQ 522 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I+ + + H +P+ +ILE+TE N E+ + + QL G ++AIDDFGTG+++ Sbjct: 523 HIVHILRDTHFAPEHLILEVTESGLMENFETGKHILTQLKNIGVQVAIDDFGTGFSSLAY 582 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 ++ L ++KID F++ I N+ DA IV +I LAK+ + V+AE VET Q ALL ++ Sbjct: 583 IRNLPVSLLKIDRSFIQGIAENSKDATIVDTIIHLAKSLDIQVLAEGVETYHQVALLQQM 642 Query: 712 GVQYLQGYLIGRPQPLA 728 + QG+ + Sbjct: 643 DCDFAQGFYFSKSLEAE 659 Score = 42.3 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 12/121 (9%), Positives = 32/121 (26%), Gaps = 11/121 (9%) Query: 214 AFTLSWLAALSVLL-----LLLCTPYENDFIAGY--LVPVFFIIFTLGVGKLRYPFLNLT 266 +V + ++ T + G V F L Sbjct: 5 YAAFFHHFTEAVAILNTEGYVIYTNPAFQALLGTNGSGAVRHAHFETIAEMETIVVEPLL 64 Query: 267 WAVSTL-CLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRW 322 +V + N + + ++ + + +++ + L + R + + L R Sbjct: 65 QSVRNGKSIHNVEWTIKKADDRIVPVSAVFSPIVNEQGEIDSILCVCRDVTKEKKLERAL 124 Query: 323 H 323 Sbjct: 125 E 125 >UniRef50_Q3A5Q2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5Q2_PELCD Length = 734 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 103/579 (17%), Positives = 198/579 (34%), Gaps = 45/579 (7%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLLLLCTPYEN 236 M R+ +Q + + + LL + Sbjct: 123 VMHMLRSARLCEDLRVSQARISLAQRIAHLGHWHFNFKTKDFVCSDAVLSLLD----RRD 178 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL-----LNYNQNFLQGVETEYSL 291 D + I +++ N + + + Sbjct: 179 DISVHNPESLLRNIHPDDKPRVQAALENAIGNRQPYQENYRINVQGEERRINSQGEIQ-- 236 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 + +++ ++ A D LT L + + + Sbjct: 237 ----TNGNGEPEAITGIIQDVTDIYHAEQKIFRLAHFDALTGLAKRKFFMEKLAEAVFLT 292 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-----------ENEK 392 + L +D + ++ + G + +R + + + +Q E+ Sbjct: 293 EHGHGQLAVMILDLDRFKRINENLGHVPGDQILRKMAKRIQRSLQQCHVLYPSSLTEDHC 352 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + + G+E ++L + ++ + L ++ ++N + + F + Sbjct: 353 IARFGGNEFAILLPEVQDTHQVNRIAGHLLKDIAQPFTFDNCEVLITTSIGICLFPEGSD 412 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 Q ++ Q+ + + T +++L N +R AL + +LY Q Sbjct: 413 DQQDIIRNADIALRQAKSQGRD-TFRLYHPSMGKPTQDRLILENDLRNALKNDEFVLYFQ 471 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + G + ++ G+ P FLPL + L D VL +A Sbjct: 472 PQVDIRSGQLLGAETLIRWQHPQQGLKLPGAFLPLALESGLIIEIDQWVLRQACAQIARW 531 Query: 567 PCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R SVN+ Q+ +A I + ++ I A+ +E+TE N ++ Sbjct: 532 QAAGYDKLRLSVNVSGQLFAQEGVAALISDIVRQSGIPTGALEIELTENTLMQNNAQTIS 591 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L + G IAIDDFGTGY++ LK D +KID F++D+ D I R+I Sbjct: 592 TLTDLKQLGTNIAIDDFGTGYSSLSYLKNFPIDTLKIDRSFIRDLENAPGDIAITRTIIA 651 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 L + L+ + E +ET QQ+ LL LG QGYL RP Sbjct: 652 LGENLGLTTICEGIETHQQKDLLVDLGCYIGQGYLFARP 690 >UniRef50_B5ZG86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alphaproteobacteria RepID=B5ZG86_GLUDA Length = 974 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 121/755 (16%), Positives = 234/755 (30%), Gaps = 51/755 (6%) Query: 9 KNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVL 68 + I +L F ++ P H L + + VM L G + Sbjct: 213 MTLAIMSLHFIAMADTDVVAASSPPDLARHLLSPMLMVVIIGVMACALLPIGLAASIITY 272 Query: 69 CGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWL 128 L + + R + + L Sbjct: 273 RAELAAWRNELGFRLLVDEARDYAVYMLDDAGRVTTWNVGAQRLTGYSAREVLGRVGGRL 332 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADA-IFTVVDLLSLFTAVLIYNMLFYYLT 187 L+ + + + D F ++ + F Sbjct: 333 YSEAERRDGVPQRLLAEAREGTVAREGWRYRKDGSPFWASVTINPVRDEAGAQVGFAVSV 392 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R + + + L G +F Sbjct: 393 RDDTKRKTDADRIAQMTRNL-------DIALQNMSHGLCLFGADA--RLILANGRYAEIF 443 Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF------ 301 + G K + L V T L+ + T ++ Sbjct: 444 GL--PEGAAKPGMTYRALLTLVYTRRGLSAEAVRRRVDGTFERQMALVRRRRGGTSVLHP 501 Query: 302 --------------SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 + R A D LT L N +A ++ Sbjct: 502 RPDMAVQVQYRIMADGGWVATYEDITERLRAEARITYLAHHDSLTGLANRAWFTEALDRA 561 Query: 348 --------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +D + ++ +G + + ++ + +++++E + +L G Sbjct: 562 LTLAASGTQRVAVIGIDLDKFKEINDQHGHAVGDQVLVTLAARIRDVLEDDELVARLGGD 621 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E + L + L S+ I + L + + ET++ L+G Sbjct: 622 EFAA-AKRFDDMAELNAFIGRLEECLSQPIGVDGFELRPNASIGVSLYPRDAETVEALMG 680 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RN 513 ++ + E + + L+ + A+D L+ Q Sbjct: 681 DADLAMYRAKGALR-EHVCFYEAEMDEAARDRRSLVAALWEAVDHHQFHLHFQVQKRVAT 739 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 E G++ +L + G + P F+PL + VL + A Sbjct: 740 GEITGFEVLLRWHHPERGWVAPMDFIPLAEECGAILPIGEWVLRQACREAARWSR---PY 796 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R +VNL + L + +A + + + ++P + LEITE + + S+ ++++ Sbjct: 797 RIAVNLSAVQLGEDGLADMVRAILEETGLAPSRLELEITETAIIVDKQQSLRTLQRIKAL 856 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G I+IDDFG GY++ E L+ D IK+D F+ +I + I+R+I L ++ ++ Sbjct: 857 GVSISIDDFGVGYSSLETLRTFPFDKIKMDRSFMTEIERSPESKAILRAILALGRSLTIP 916 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 V+AE VETQ Q +LH G QGYL+GRP+P+ Sbjct: 917 VLAEGVETQVQLDILHAEGCIEAQGYLLGRPKPME 951 Score = 84.6 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/353 (6%), Positives = 74/353 (20%), Gaps = 47/353 (13%) Query: 14 FTLAFTLTVVLIQ-LSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV-------- 64 + F + + ++ S + + V+L+ G Sbjct: 62 WATHFLGMLAFGSDVVAAYRLRPVVLSLGVSMLASGAAVLLAGCVAPVAAGALAGGDADG 121 Query: 65 -------------------------VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLC 99 +L + + L + + ++ L Sbjct: 122 DADAGADRAARTRRTRMREILVGVGAGILFILGVAAMHVMGLQAARMHGLTWNEPMSALA 181 Query: 100 ACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST--FF 157 + + + R + + I ++ + D S Sbjct: 182 LLVGGGFSIA-AFLTARWGSSAPFRCLVPAWLMTLAIMSLHFIAMADTDVVAASSPPDLA 240 Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW--RRDIAPSLGKEKRAF 215 + +V ++ + L+ L + + R + + Sbjct: 241 RHLLSPMLMVVIIGVMACALLPIGLAASIITYRAELAAWRNELGFRLLVDEARDYAVYML 300 Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + + T Y + G + + R A + + Sbjct: 301 DDAGRVTTWNVGAQRLTGYSAREVLGRV-----GGRLYSEAERRDGVPQRLLAEAREGTV 355 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQ 325 + + + + + + + VR + + R Sbjct: 356 AREGWRYRKDGSPFWASVTINPVRDEAGAQVGFAVSVRDDTKRKTDADRIAQM 408 >UniRef50_D1CDW9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDW9_THET1 Length = 718 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 118/576 (20%), Positives = 227/576 (39%), Gaps = 23/576 (3%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 L S +LI ++ R+ + A+I +A E+ T + + Sbjct: 139 RLPSNLILMLIQDVSLTESLRVQLEIEHAKIEIAERVANLGLWERDTSTGQEVWSDQTFK 198 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 + P + YL+ + V ++ L + + L + Sbjct: 199 IYGLKPGSLEPSYEYLLRIVHPDDRDRVDSAYR------DSIKALSAYDVSYRILLPDSS 252 Query: 288 EYSLAFILAVLISFSVCLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 + ++ LL V+ + QAL DPLT LPN L Q E Sbjct: 253 IRVVHSKAQIVKGADSHLLLTGTVQDVTEQKVNEESLLRQALHDPLTGLPNRVMLGQQLE 312 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + L +DN + ++ + G + ++ R L ++ + + G Sbjct: 313 KLLASNRSRSIAVLFLDLDNFKAVNDNLGHQAGDSLLVAVARRLSANLRPTDFAARFGGD 372 Query: 400 ELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +V++ ++ + + + S+ + ++++ LL Sbjct: 373 EFTVVVTKVKSIDYVVSIAKRIIESISQPFDIAGERVYTSTSIGIALCSSSEDSASSLLR 432 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 + +S + ++ + + ++ + L +RTA+ +++ QPI + Sbjct: 433 KADIALYKSKSLGRG-TYVIFDQSMEQEASEILELERNLRTAIQNDQFIVHYQPIVDAAT 491 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKG 572 + E + +L + GI++PDKF+P+ + L VL + A Sbjct: 492 GKVEMIEALLRWNSPN-GILSPDKFIPIAEEVGLINTLGELVLNKACEQTAYLKATTGAK 550 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 S+N+ L Q + + + +Y + P+ V LEITE E ++++ Sbjct: 551 FITSINVSAKQLRQPHFTNNLESMLHKYDLQPKDVQLEITENALVEEVECITNALKEIKT 610 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G RIAIDDFGTGY++ L++L D+IKID FVK + + I+ +I LA + L Sbjct: 611 LGIRIAIDDFGTGYSSLSYLRKLPIDLIKIDQSFVKMLPNDEEHRAIIYTIISLACSLDL 670 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++AE VE + Q+ +L +G +++QG LI P L Sbjct: 671 EIIAEGVEEKSQREILLSMGCKFIQGNLISHPVDLE 706 >UniRef50_Q1YK72 Putative sensory protein, diguanylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YK72_MOBAS Length = 632 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 107/579 (18%), Positives = 205/579 (35%), Gaps = 23/579 (3%) Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 + ++S+ A + + FYY + A+ + + + Sbjct: 22 LALIVSVLVAFVPPALHFYYGLQYAEGSLAAEARLNSRLVSQIVGRNPQMWQFETLRIDE 81 Query: 226 LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 ++ + V I + + + + Q+ + Sbjct: 82 IIAFTDATVTKTLLNAEGGEVSRIGAAALPWPTVSTTHPVYDSGAVAGRIVITQSLF-AL 140 Query: 286 ETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 +L F++ + V R A DPLT LPN + Sbjct: 141 ARTSALLFLVCAAGALGVFFALRTLPLRLLRRAADRASFLASHDPLTQLPNRSLFNEWLV 200 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 Q+ + CL +D+ + ++ G +R + + ++ + L +L Sbjct: 201 RSVADVDRQDGSMAVLCLDLDHFKEVNDLLGHAAGDELLRQVTERMTATLRRYDILARLG 260 Query: 398 GSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRF--DGNQETLQ 452 G E ++ + L S+ + +G + Q Sbjct: 261 GDEFAIIQKHFAQPAGSARLAERLIEELSKPFDLKGNEVLIGVSIGVALRRDPED-RDGQ 319 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 LL Q ++ E+ ++ + + + +R A+ + +L L+ QP Sbjct: 320 DLLRQADMAMYRAKGEGRG-TFRYFEDAMNDRLVARKKVELALRHAIARNELQLHYQPQI 378 Query: 513 NKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + + +G + ++ + + GI+ P+ F+ L + L V+ + P Sbjct: 379 DMKTNSVKGVEALIRWYRGEDGIVQPNDFIQLAEETGLIIPIGEWVIREACRQAGDWPE- 437 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 F+VN+ P+ N+ + + P + +EITE S+ + ++ + Sbjct: 438 ---LTFAVNVSPVQFRHGNLVETVRSALAEAGVEPHRLEIEITENVLLSHTDETIETLRA 494 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G RIA+DDFGTGY++ L+R D IKID F D+ T IV ++ +L A Sbjct: 495 LQAMGVRIAMDDFGTGYSSLSYLRRFPFDKIKIDRSFTSDLGTCFDADSIVAAVINLGAA 554 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + AE VET +Q LL G +QG+L RP P A Sbjct: 555 MGMVSNAEGVETLEQAELLRAQGCNEVQGFLYSRPVPSA 593 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 100/447 (22%), Positives = 182/447 (40%), Gaps = 20/447 (4%) Query: 300 SFSVCLLYMVRIY-HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGK 350 L + + A D LT L N L ++ + + Sbjct: 215 DELGRLALSFHNLWQARAAAESQLNQLAYFDTLTGLANRSLLLKSLNETLKESQSEQYPG 274 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +D + ++ G + + +R+I + L +Q E ++ G E +++ Sbjct: 275 VLFYLDLDRFKTINDSLGHTIGDNLMRTIAKRLEAWLQPGEIAARIGGDEFAILIPKL-N 333 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + L S ++ L F + +L Q ++ Sbjct: 334 KEDAANKAKQLLTLISNPYSIDDHQLYCTVSIGISTFADKGISSIDVLRQADTALYRAKV 393 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILAR 525 E + Q + + + AL +G L LY QP N + G + ++ Sbjct: 394 AGRNK-YMFYEPEMQAQVESFLEIEKGLHEALHKGQLELYYQPQVNAQQQIIGVEALIRW 452 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP----RFSVNLMP 581 + G++ P F+P+ + + ++E A ++ P R ++N+ P Sbjct: 453 NHPEKGVLPPGVFMPIAEETGQILQIGDWIIEQACFQYAQWKKEQVLPETFHRLAINISP 512 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + I K+ +I+ + + LEITE N ES++ + +L + +I+IDD Sbjct: 513 LQFSKNAFVEHITHALKQANITGEHIELEITESLLLENVESAINKMAELKELDLKISIDD 572 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK L D++KID FV + + D IV +I +A+ SL V+AE VET Sbjct: 573 FGTGYSSLRYLKHLAVDVLKIDRSFVTQLHLDQSDQAIVSTIIMIAERLSLEVIAEGVET 632 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 +++ L +LG + QGYL G+P P+ Sbjct: 633 EEEFNTLVELGCEQFQGYLFGKPLPVE 659 >UniRef50_B0C8G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8G1_ACAM1 Length = 911 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 113/565 (20%), Positives = 200/565 (35%), Gaps = 27/565 (4%) Query: 183 FYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----LLCTPYEND 237 L ++ S L A E++ + L +L L + + Sbjct: 329 LTTLAELMGSTFERIRLQDEAAAVLRDSEEQVRLFIDGSPLLLLALDSQGMIHRVSHFGA 388 Query: 238 FIAGYLVPVFF-----IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 GYLV I+ +L + + + LQ T Sbjct: 389 SQLGYLVDHLIGSPFSILHPDDQTAEIQAYLQTLSNLEIGEIYSREAQMLQADGTLIWAR 448 Query: 293 FILAVLISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE----- 345 + LL + L + H A D LT LPN E Sbjct: 449 QNARRVHDHRGIPQLLLACEDISKVRSLTDQLHFMAHHDALTALPNHTLFRHTLEALIAK 508 Query: 346 ---QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 Q + + +D + ++ + + + + L + ++ + +L G E + Sbjct: 509 TADQPTPFAMLFIDLDGFKKVNDSLSHAIGNELLCQVAQRLQGAVTSSDTVARLGGDEFV 568 Query: 403 LVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L + M + + H N + +G + +T L+ Q Sbjct: 569 VLLPRAASPDAAAKMAQAILQQLRTPFHVQNHEIFIGGSIGISLYPAQGKTSSELMKQAD 628 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGE 517 ++ A +S +++ + + +RTA+++ +L L QP + Sbjct: 629 LAMYRAKAQGRN-NYQFYSAQLSATLQRKLAIEHALRTAIEKDELNLVFQPQVGPEGQIL 687 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 G + ++ GI+ P F+P+ + +L A VL+ L LA +V Sbjct: 688 GLEALVRWHHPTLGIVPPSTFIPIAEESHLIAALTDWVLDHSLAILAPLNSAYPHLYVAV 747 Query: 578 NLMPLTLLQK-NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 N+ L + R+ R + A+ LEITE E + L G R Sbjct: 748 NISAQEFLAPCTLVKRVRRALTAAKLPGSALELEITESVFLHPGEVPSQLLTALKNEGVR 807 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 IAIDDFGTG+++ L L D +KID FV DI + I++ I +A + ++ VA Sbjct: 808 IAIDDFGTGFSSLAYLLNLSFDTLKIDRTFVSDIDIDPAKEGIMKGILTIANSLGVTFVA 867 Query: 697 EFVETQQQQALLHKLGVQYLQGYLI 721 E +E+ Q L +LG + QGY Sbjct: 868 EGIESSSQLHCLQRLGCSHYQGYYF 892 >UniRef50_A0L6C9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L6C9_MAGSM Length = 555 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 91/544 (16%), Positives = 188/544 (34%), Gaps = 37/544 (6%) Query: 217 LSWLAALSVLLL----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTL 272 L A +++ +L + G + + + Sbjct: 10 LLHHLADGIIIHEQDMILYANEIARIMLGTEIHTDLTQSLFSLRIDPTCREAWLHNGANH 69 Query: 273 CLLNYNQNFLQGVETEYS-------LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + L+ +R + R Q Sbjct: 70 SHEADRVKLV--DLKLLPEAKPFTHVEALTIPFQGNERLLVTTLRDISEKKRQEERIRHQ 127 Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN + + + +D ++++ G +R Sbjct: 128 ANYDALTGLPNRGLFLDRLKLELARAKRTDVRVAVMFIDLDRFKWVNDTLGHAAGDDLLR 187 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLD 434 + LL ++++ + ++ G E ++L + + + + + Sbjct: 188 EASKRLLSCHRQSDTVARMGGDEFTVILPDMARGPHAERVAAQILEQLAAPFTLEGQEVT 247 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + F + + L LL ++ + A + + ++ L Sbjct: 248 ISGSVGVTIFPDDADNLDDLLKNADTAMYRAKSQGRN-AYRFYTPDMHAEAMARMALERE 306 Query: 495 IRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 + +A++ +L L QPI + G + +L G ++P+ F+P+ + L A+ Sbjct: 307 LSSAVEDQELALCYQPIVDLNTNRIAGAEALLRWNHPTLGAVSPEVFIPIAEEMGLIAQI 366 Query: 552 DLQVLESLLKWLATHPCDK---KGPRFSVNLMP---LTLLQKNIAGRIIRLFKRYHISPQ 605 + K SVNL L + +I + + P Sbjct: 367 TEWAVREACTQACQWRSQYGTAKDFFISVNLTCTRCRELSTDD---KIPSILAETQLPPH 423 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 A++LE+TE + +M + L + G R+ +DDFGTG ++ L+ L +KID Sbjct: 424 ALVLEVTETILGEDPPKAMAMLNHLKQIGVRLWLDDFGTGSSSLSVLRNLPVCGVKIDRT 483 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV D + + ++V +I ++ ++ + ++ E VET+ Q+ L GVQ QGY G+P Sbjct: 484 FVPDALNDKEAEVLVTTIINMGRSLNRILIGEGVETEAQRLYLEGKGVQLAQGYFFGKPC 543 Query: 726 PLAD 729 A+ Sbjct: 544 SAAE 547 >UniRef50_UPI0001AEC71A response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC71A Length = 701 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 108/615 (17%), Positives = 219/615 (35%), Gaps = 31/615 (5%) Query: 145 SFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDI 204 + + +++ + + F + I L R ++ + R Sbjct: 76 TAAIPVIFVTSHSDPENEHVALSLGAIDFISKPIDIGLCQMRVRNHLTIQDQKTKLARVN 135 Query: 205 APSLGKEKRAFTLSWLAALSVL-------------LLLLCTPYENDFIAGYLVPVFFIIF 251 ++K+ A V+ + T Y G + + Sbjct: 136 HELEAEKKQLAITLKSIADGVISINAAGDVTFINPVAQRLTGYSETEALGKPIDEVMNLR 195 Query: 252 TLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYM 308 + V ++YN + + + + +I L + + Sbjct: 196 DASTNERLLNPALYALEVMRPVAMSYNATLVSRHNQVFRVEDTASPIIDEDGHLSGAVIV 255 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNL 360 + + + + D LT LPN L Q + + IDN Sbjct: 256 FQDVSEAIEMAVKMTHLTNHDQLTGLPNRVLLHDRVVQAITRCFTSKQSIALLLIDIDNF 315 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 ++++ G + + I SI + L ++ E+ L ++ G E +L+ + + Sbjct: 316 KYLNDSLGHQVGDYIIASIAKRLAKVVGESATLARVGGDEFACLLTEIGSGYSADSIAMA 375 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 I + + + + + ++ +S + Sbjct: 376 CLQAGREPIDIDGKAHQLSLSIGISLYPQDAVNAEEMMRHADSAMYRSKSKGKD-TFSFF 434 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 + + +V + +R A++ L +Y QP + + ++ +G ++ Sbjct: 435 SKDLQHAMHHRVEMEVKLRNAIENDSLAIYLQPKYNFDDSAVLSAESLVRMFDENGKVIG 494 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 PD+F+PL + L + QVL+ +++A + + +VN+ L A + Sbjct: 495 PDEFIPLAEETGLIHQLGKQVLQKSCEFVARCNELGQDFKVAVNVAAKQLSNPGFAKEVA 554 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + I+ ++ LE+TE + E + + L G IA+DDFGTGY++ L++ Sbjct: 555 EIINEAGIAASSIELEVTESALMHDFEQTRDILNDLASLGVTIALDDFGTGYSSLSYLRQ 614 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 +++KID FV D+ IV +I LA + L++VAE +ETQ A L LG Sbjct: 615 FPLNVLKIDRSFVIDMDKEQQAHDIVTAIVHLALSLELTIVAEGIETQSHFAALKALGCH 674 Query: 715 YLQGYLIGRPQPLAD 729 QGY + RP +AD Sbjct: 675 LGQGYFMCRPMAMAD 689 >UniRef50_B8FI78 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI78_DESAA Length = 858 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 85/435 (19%), Positives = 169/435 (38%), Gaps = 20/435 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 L QA D LT L N AL + E+ E + + +D + ++ Sbjct: 416 EKVRLTETLVYQARHDDLTGLANRGALREWLERSLNAAKRYEEMLALLYIDLDRFKQVND 475 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---N 422 G ++ ++ + LL ++++++ L ++ G E +L S E++ M + Sbjct: 476 SLGHVVGDQLLKEVVSRLLRIVRDSDILARMGGDEFVLAASRLESKEDALGMGRRIRQIF 535 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + L + F + + L+ + L E + Sbjct: 536 REPYRIQDHELYLDASIGISFFPEDAQDAGKLIRHADTAMYYAKIRGGNR-LAEFEPQMK 594 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 +++ + N +R A++ + L+ QP +K G++ ++ + G + P KF+ Sbjct: 595 MAVLERLEIENDLRKAIENKEFELFYQPQYELASKRLIGFEALIRWNHPELGRIPPLKFI 654 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFK 598 PL + L V+ A G + SVN+ + + ++ Sbjct: 655 PLAEETGLIIPIGEWVVHEACAQNARWAKAGYGSFKVSVNVSSVQFADEGFLDVLVSALN 714 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + + +E+TE + +S + + G AIDDFGTGY++ L L D Sbjct: 715 KSGMESHHLEIELTESILVKDVKSIANMLSGVKSLGATTAIDDFGTGYSSMSYLHDLPID 774 Query: 659 IIKIDGVFVKDIVTN----TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 +KID FV + + ++ I +++ L+V+AE + +QQ L K+G Sbjct: 775 CLKIDRSFVINTGDDTFASERKRNLLSKIVEMSHDLGLTVIAEGFDNKQQFDYLVKIGCD 834 Query: 715 YLQGYLIGRPQPLAD 729 QG+ +G P + Sbjct: 835 VGQGFYLGVPMSAPE 849 >UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase n=11 Tax=Clostridium RepID=A7GAB5_CLOBL Length = 892 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 98/525 (18%), Positives = 206/525 (39%), Gaps = 23/525 (4%) Query: 216 TLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL 275 + + + + I G + F L ++ L Sbjct: 369 IIDFRVVEINNYFSELLNTDKENIIGENISSFIPSILNENPILIKSIKKISSVGGKETLE 428 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 L+ F V ++ ++ + A D LT L Sbjct: 429 EIYIEELRK-------WFSAVVYSMEVDYFALLLTDITENKKDKEKILGLAYYDSLTGLS 481 Query: 336 NFRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 N + + + + + + +D+ + ++ G + + + + L+ Sbjct: 482 NRKKIIETINKTINSYENEKFAVLFIDLDHFKSINDTLGHDVGDYVLEKVSARFKMLLSP 541 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDG 446 K+ +L G E +++ + + + + + I + L +G + Sbjct: 542 KNKIGRLGGDEF-IIVQNITSISDAEKLACKICTTLNHSIKYKEDDLFIGASIGISIYPE 600 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + L+ + + + ++ + ++L N +R AL++ +LL+ Sbjct: 601 DGKDTSTLMKNADAAMYAAKKNG-GYKYEVYSRSMNERALDDLILENRLRRALEKNELLV 659 Query: 507 YAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QPI + + + ++ + I++P++F+PL A D VL Sbjct: 660 YFQPIYHLKTSKIIAMESLVRWKFDNK-IISPNQFIPLAKNIGEIANIDNWVLNKACSQC 718 Query: 564 ATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 K SVN+ + KN ++ + + + P + LEITE++A + + Sbjct: 719 NLWQKQNNKPLYVSVNISFKQMKDKNFVDNVLNILRTTKLEPSYLCLEITEDEAMEDVDL 778 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 S+ +E L + G +I++DDFGTGY++ + +L D IKID +K+I + IV+S Sbjct: 779 SIKTLEALKRHGIKISLDDFGTGYSSLSYVTKLPIDNIKIDKSIIKNIHKDNKSLQIVKS 838 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 I ++K+ +++VAE VET +Q +L +LG ++QG+ I P P+ Sbjct: 839 IILMSKSLDINIVAEGVETIEQLEILQELGCDFIQGFYISEPLPI 883 >UniRef50_Q30VT6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=Q30VT6_DESDG Length = 935 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 107/610 (17%), Positives = 218/610 (35%), Gaps = 39/610 (6%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 D V+ + A+ ++L++ + S + R Sbjct: 208 SLALWHDEYRVQFPDGRVIWVEGEASPEAMPDGSILWHGYIHDVTSRRRSAEELRLAAK- 266 Query: 207 SLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF---IIFTLGVGKL 258 + A +L+ ++ I GY Sbjct: 267 ----------VFEHAGEGILITDAQGHIVNVNRAFSVITGYAREEVMAQTPRLLESDRYD 316 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRS 315 + + A+ + + ++++ ++ + M Sbjct: 317 DEFYQTVWQALREHDYWHGELWCRRKNGSQFAALLTISAVPDMRGNIEHYAAMFSDITAL 376 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + ++ A D LT LPN L + + + +D + ++ + Sbjct: 377 KENQQQLERVAHYDLLTGLPNRLLLGDRLKQAIRQTRRRGMHLAVVFIDLDGFKEVNDQH 436 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SR 424 G + + + R + +++E++ L +L G E + VL +++ L ++ Sbjct: 437 GHAVGDKLLSVLSRRMTQVLREDDTLARLGGDEFVAVLLDLPDISVSVPILDRLIEVAAQ 496 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQE-TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + ++ + ++ LL Q ++ + Sbjct: 497 PVPIGDALCEVSASIGVSYYPQGEDIDADQLLRQADQAMYRAKQAGKNR-YHVFDTEKDR 555 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 + L++I AL G LLY QP N E G + ++ G+++P F+P Sbjct: 556 TLRTRHEELDSIEKALANGQFLLYFQPEVNMRTGEVLGAEALIRWQHPTRGLLSPASFIP 615 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 +I L +E+ L + SVN+ LLQ + + + R+ Sbjct: 616 IIENHPLGIDVGEWTIEAALTQIEVWRKAGLHVPISVNIGARHLLQPDFIMHLRGMLSRH 675 Query: 601 -HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 PQ + LEI E A + + + G R A+DDFG+GY++ LKRL A + Sbjct: 676 PGAQPQDLELEILETSAVEDFVQVSQLMALCGRMGLRFALDDFGSGYSSLTYLKRLPAHL 735 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F++D++ + D I+ ++ LA++ + +AE VE+ Q +L ++G ++ QGY Sbjct: 736 LKIDQDFIRDMLEDPDDIAILDALLALARSFGRNCIAEGVESIQHGEMLLRMGCEWGQGY 795 Query: 720 LIGRPQPLAD 729 IG P P + Sbjct: 796 AIGHPMPAHE 805 Score = 52.3 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 9/185 (4%), Positives = 24/185 (12%), Gaps = 9/185 (4%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW---RRDIAPS 207 L + + + + I + RR Sbjct: 81 LDLRYRIVSGGQVRWIHLRATFKGDASGRPRAADGTVEDITDLKRVEQALNSMRRQREEL 140 Query: 208 LGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTW 267 L + + V + Sbjct: 141 ASHVPGMLYQYRLRPDGSSHFPYASARIQEIYGVAPEDVVEDATPAFAALHPEDRDRVHE 200 Query: 268 AVSTLCL----LNYNQNFLQGVETEYSLAFILAV--LISFSVCLLYMVRIYHRSEWLNRR 321 + + + + + S+ + Sbjct: 201 TIQASGQSLALWHDEYRVQFPDGRVIWVEGEASPEAMPDGSILWHGYIHDVTSRRRSAEE 260 Query: 322 WHLQA 326 L A Sbjct: 261 LRLAA 265 >UniRef50_Q2BIX1 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIX1_9GAMM Length = 888 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 98/589 (16%), Positives = 203/589 (34%), Gaps = 29/589 (4%) Query: 167 VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL 226 L + +I+ + + + G + + SV+ Sbjct: 280 AWLERMQPIGVIFILFLLAALLAYRAALQISKKISDAKQAAEGNVHKLSKAIEQSPNSVV 339 Query: 227 LLLL-----CTPYENDFIAGYLVPVFFIIFTLGVGKLRYP-----FLNLTWAVSTLCLLN 276 + D + Y ++ V+ Sbjct: 340 ITDNNWCIEYANSHFDIATAKPNAHDKARGHNIIDYPPYNVLTTDLKKISDEVALSGNWF 399 Query: 277 YNQNFLQGVETEYSLAFI-LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 YS + + + +V+ + + + QA DPLT LP Sbjct: 400 GE-RKTDFDGKWYSFSISHITNPSDQITHYVTVVQDISARKQAEAKLYKQANFDPLTGLP 458 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R + + + + L IDN + ++ +G M+ ++ + L+ Sbjct: 459 NRRRAHENLTAELQSAWKHKQQVAVLYLDIDNFKNVNDTFGHMVGDQLLQLVSARLVKCC 518 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRF 444 ++ + + G E LV + +E ++ + + + + + R+ Sbjct: 519 KDLANICHISGDEF-LVYARYASESDIRKLAQKILDDVQTPVLIEGKQIFVSVSIGISRY 577 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + + L+ +S + + + ++ + +R AL++ ++ Sbjct: 578 PEDNNDVTGLVKFADIALYESKREGRNR-YSFFDHELDRRLKRKHTIETELRQALERNEI 636 Query: 505 LLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 + Q I + + G++ ++ G + P +F+ + + L Sbjct: 637 YMAYQSKNDIASGKIIGFEALMRWNSGVLGPVGPFEFIEVAEDIGVINELGEFALRQACI 696 Query: 562 WLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L + +VNL L +I + + + I P + LEITE N Sbjct: 697 DLQEFQKFSDTTLKMAVNLSIRQLNDDSIVDMVAKGIEETGIDPSRLELEITESLLAENI 756 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + + +E+L + G + IDDFGTGY++ L +K+D FVKD+V+N DA + Sbjct: 757 DQILPRLERLLELGTALTIDDFGTGYSSLSYLTTFPVSTLKVDRAFVKDMVSNEGDATLT 816 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I +A A + VVAE +E + Q A+L + QGYL +P + Sbjct: 817 HTIITMAHALGMKVVAEGIEDEDQLAMLREQNCDIGQGYLFSKPLTQKE 865 >UniRef50_A3JIW6 Two-component response regulator n=3 Tax=Marinobacter sp. ELB17 RepID=A3JIW6_9ALTE Length = 848 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 109/612 (17%), Positives = 212/612 (34%), Gaps = 25/612 (4%) Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + L+ +A VD+++L V Y + R I A Sbjct: 232 VANEALILMAGGESHSYEIAGLNASGEAIFVDVINLPIVVDGDVRGGYGIARDISERKKA 291 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI---IFTL 253 + R L ++ ++GY + Sbjct: 292 EDRMRLLERGIEASPNGVVMLDASVQDYPMV---YVNPAFTEMSGYQPKEAIGKGYLVLF 348 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVR 310 G G + A+ + + + + + + + Sbjct: 349 GKGTAPEALRLIRSALEHQEECEITLLSYRKNGSTFWKKLTITPVYDGRGECTHYIAAQQ 408 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 R QA DP+T LPN R E Q + + +D+ + Sbjct: 409 DVTRQLKSEELLDYQARHDPVTGLPNHRLFEAHLSQVFVRARGKTSDMVLLYVDLDDFKS 468 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + + L L+ ++ L +L E +++ + E ++ + + + Sbjct: 469 LNESLGRQVGDLLLAVVADRLRNLLANDDVLTRLAADEFVIMRPALQAEAEVKMLASQML 528 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + L + DG+ E + LL + ++ Sbjct: 529 TCLAEAYDIKGQRLSISASIGIASDDGSVEQPKELLDNAALAVREAKRQGGN-TFCWNHG 587 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 S T+QV++ + A++ ++Y QP+ + ++ G++ P Sbjct: 588 AASTAGTEQVIMRCELMEAIEARQFVVYYQPLVEAKTGRLRSAEALVRWNHPARGLLLPG 647 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+ L Q VL +A + +VN+ PL + ++ Sbjct: 648 AFISLAEQTGQIVAIGRWVLHQACMDMAQRWRQTGQAVSIAVNISPLQFRRPEFIDDVLA 707 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + P+ + LE+TE S + ++ +E L G ++AIDDFGTG+++ L++L Sbjct: 708 VLEASGLPPELLELEVTEGVLLSGIDKAISMLESLRDLGVQVAIDDFGTGFSSLSYLRQL 767 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +K+D F+ D+ T+ A IV+ + +A L VVAE +ET +QQ L Sbjct: 768 PITKVKLDRSFIIDVTTDRGSAAIVQGVITMAHHLGLLVVAEGIETVEQQNYLAASDCDL 827 Query: 716 LQGYLIGRPQPL 727 LQG+L RP PL Sbjct: 828 LQGFLYSRPVPL 839 >UniRef50_A0XY04 Sensory box/GGDEF/EAL domain protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XY04_9GAMM Length = 1485 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 99/557 (17%), Positives = 212/557 (38%), Gaps = 23/557 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWL-AALSVLLLLLCTPYENDFIAGYLVPVFF 248 I + + L S + T +++ +F Sbjct: 919 ITEQRANEEQAKILGEAFSQINDWLLILDDHLMPFSANNSFIRTFSDSEEFTNISPKLFI 978 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 + F + + + + +++ + + + + Sbjct: 979 ---KSIGKENCKEFAKILKKLQPTENWHIDTLIKTAKSSKHPVHINVTAVAKSTTEVSYY 1035 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRI 357 + ++ + A D LT LPN + Q E+ + + + Sbjct: 1036 VIVISDLTEQKRAENELRYLANYDALTKLPNRSLMYQEIEEAIKQAESSNTHCALLFIDL 1095 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ +G + + +I + ++ EN +L + G E L+++ E++ L+ Sbjct: 1096 DKFKPVNDSFGHAVGDKLLCNITERVSNILNENAQLGRQSGDEFLVLIKNVESQDSLKET 1155 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V ++ + ++ + +++ + + T L+ Q+ + Sbjct: 1156 VMLISKELANKVMIEDFAINISASIGVALYPFDAITTDILIRNADVAMMQAKQNGRN-GF 1214 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGG 531 + ++ Q ++++L N ++ A+ + QPI + E G + ++ + Sbjct: 1215 SFFSDEMNEQIKQKLMLENDLKDAVKADLFFNHYQPIVDIEARTINGVELLMRWKNKEQ- 1273 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 ++P F+P+ + L R L+ L LA + S+NL P +L++NI Sbjct: 1274 FVSPAVFIPISEETGLIERLTELALKRALIELAPLLNENPLFYISLNLSPKHILKENITE 1333 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 R+ + I P+ + LEITE + + +++L GF++ +DDFGTGY++ Sbjct: 1334 RLQCILADAGILPKQLRLEITETILLEDKLKAANQLQKLKAAGFKLLLDDFGTGYSSLTY 1393 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 L + ++IKID FV I + D I+++I LA+ +L +AE VE + Q L Sbjct: 1394 LSQFPINVIKIDQSFVNSIGEDKGDESIIKTIISLAENLNLYCIAEGVENRDQMEFLVNA 1453 Query: 712 GVQYLQGYLIGRPQPLA 728 G LQGY +P Sbjct: 1454 GCHVLQGYYFAKPMSAE 1470 Score = 51.5 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 9/177 (5%), Positives = 37/177 (20%), Gaps = 6/177 (3%) Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGK 210 L ++ + + F + + + ++ Y + ++ + + K Sbjct: 752 LSMNVAYAPWKSPFAIFTYIIVMLSLFALFFWQYRNRQNVIQQAHTDTINSKKQTELALK 811 Query: 211 EKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF--IIFTLGVGKLRYPFLNLTWA 268 ++ + + L + + + F II + + Sbjct: 812 NNKSGIWDFRFKDGSVNTLRGIELGYENLEERVSIELFYSIIHPDDKRRFETKWQGFISK 871 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LL-YMVRIYHRSEWLNRR 321 S ++ + + + Sbjct: 872 KSKNKNWQLTYRLRHKNGQWLWYQDTGQIIFDTQTGKPLYVSGIYTNITEQRANEEQ 928 >UniRef50_Q58AF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q58AF7_RALME Length = 705 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 105/583 (18%), Positives = 209/583 (35%), Gaps = 30/583 (5%) Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL-- 230 V + ++L ++ R ++ + L + K + + + +VL+ Sbjct: 106 IGIVSMASLLAEFVCRSDINRREREALVSQLRTELEN-RKISANVLESTSDAVLVTDARL 164 Query: 231 ---CTPYENDFIAGYLVPVFFII---FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 GY F R + + + L+ Sbjct: 165 RIQYINRAFTAATGYPGADIVGRPAGFLRSGRHGRGFYAEIFATLRDGGRWEGEVWLLRA 224 Query: 285 VETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + + + M + E L ++ A D LT LPN R + Sbjct: 225 DGSIAPDWVTIKTVHDEHGEVFSFVAMFADIMQRESLRAQYMHLAYYDSLTGLPNRRLFQ 284 Query: 342 QAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 S L ++ + ++ G + + L++E + + Sbjct: 285 DRLGHAIERSANKGTEFSLLFLDLNRFKDVNDTLGHSFGDRLLEVVGERFKRLVKEADFV 344 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 ++ G E +L +++ + + ++ I N T + RF + T Sbjct: 345 GRIGGDEFTFILHDTADPAQVESIARRIFDELAKPIVLNGTQSYVSASIGVSRFPADGTT 404 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + L+ ++ + + K++ + N + AL+ + L QP Sbjct: 405 AEALIMNADAAMYRAKEDGIGAC-HFFSRGLHTKVLKRLDISNALHRALEANEFSLAWQP 463 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + G + +L ++ ++P +F+P+ + + VL +++A Sbjct: 464 QVSLTTGKVIGAEVLLRWMRDGSVPVSPAEFIPVAEETGVIGAIGDWVLRESCRYVAKLE 523 Query: 568 CD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R +VN PL L +++ ++ + + +E+TE F + E + Sbjct: 524 ALAIDPEFRVAVNFSPLQLSWHR-QEPVLQTIAQFGVDCRRFKIELTENALFVHEEGLLE 582 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L G IAIDDFGTGY+N LK L +KID F+ D+ + D IV+++ Sbjct: 583 FVRELGAAGVGIAIDDFGTGYSNLSSLKHLPVTELKIDRAFIHDMQGSHSDRQIVQAMIS 642 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A L VVAE VE Q ++L + G + QGYL RP Sbjct: 643 MAHMLGLRVVAEGVEYVWQVSVLREFGCEVGQGYLFSRPIDFD 685 >UniRef50_Q15PZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PZ4_PSEA6 Length = 590 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 94/461 (20%), Positives = 173/461 (37%), Gaps = 30/461 (6%) Query: 297 VLISFSVCLLYMVRIY-HRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 ++ V + + H A D LT LPN + L Q + Sbjct: 114 PILGERVKYILRASQAFADLVTQQQELHQLAFYDSLTGLPNRQYLMQDLKRFLAMAKRNK 173 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ------------ 395 + + +D + ++ G +R + L +++++ + Sbjct: 174 YQAAMLFIDLDRFKRINDTMGHSYGDKLLRKVAHRLQANLRDSDTFARVAAEKNKEAPQL 233 Query: 396 --LPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 G E + LS + + S + + F + E Sbjct: 234 SSFGGDEFTIFLSRLNDPNEAMLVAERVIRSFSTPFQLEQYEVVVTPSIGISTFPNDGED 293 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL + ++ ++ + ++ L +R AL +++ + QP Sbjct: 294 AETLLKNADTAMYFAKQSGR-CCYKFYQDSMNSKAAARLQLEQDLRQALKSNEIVPFYQP 352 Query: 511 IR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 G + ++ L GGI+ PD+F+P+ + L VLE Sbjct: 353 QVCAKTGRIVGVEALVRWLPLKGGIIPPDEFIPIAEETGLINELGRLVLEQGCYQAKQWL 412 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 R ++N+ Q + + ++ + + P + LE+TE S+AE ++ + Sbjct: 413 DSGHSVRMAINVSAHQFRQLDFTQTVAKVLAQSQLPPSLLELELTESVIMSDAEENIARL 472 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G +A+DDFGTGY++ LKR DI+KID F+ D+ + D IV +I LA Sbjct: 473 VELKSLGVSLAVDDFGTGYSSLSYLKRFPIDILKIDRSFMCDVNSAPDDVAIVEAILALA 532 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +L V+AE +E Q +L LQGYL RP Sbjct: 533 ESLTLGVIAEGIEYCSQITILKNTSNLLLQGYLFSRPVAAD 573 >UniRef50_C1F8P8 PAS domain S-box/GGDEF/EAL domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8P8_ACIC5 Length = 763 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 120/717 (16%), Positives = 244/717 (34%), Gaps = 31/717 (4%) Query: 38 HSSYIFLAWMPLCVMLSILFIFGWRGVVPVL---CGMFCTNLWNFHLSFLQTAVMLGSQT 94 S + + +S ++ ++ + LS + Sbjct: 17 PSFKPAMILCAVMFGVSAS-LYSALVIIGITQPWLMWPLFAASCISLSVTLLHAQENRRR 75 Query: 95 FVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIS 154 L A+ + + L L + + Y + + Sbjct: 76 RDRLLRIAVAVVTATLAGIDFFFNPPLDGGLLALLSAIYLADGLAYYRRFRRISSGVCTT 135 Query: 155 TF-FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKR 213 F ++ V LL + + + L ++ V+ L ++ + +R Sbjct: 136 LLGFAAWGLVWPVASLLGHYAPHFQAPPVLWNLPKLFVAIGMILTLLEQETLRMAREAER 195 Query: 214 AFTLSWLAALSVLLLLLCT-----PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT-- 266 TL + + L + ++ I + +L Sbjct: 196 NRTLYDKSQCGLFLTNMSGTLLDCNDALARMSSRGSSQAMIGTSAVACYADPAERDLWIR 255 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFIL---AVLISFSVCLLYMVRIYHRSEWLNRRWH 323 + + N + ++ T + L + + + ++R+ Sbjct: 256 DILRDGSIENRELHLIRPDGTAWIALMNAKLRRDLRGQPMEIEGALLDVTEHRRMHRQLL 315 Query: 324 LQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 QA DPLT L N ++E A +Q + + C+ +D ++++ ++G + Sbjct: 316 WQARHDPLTGLANRASMEDAVQQALAGADANGSQVAMICMDLDQFKWINDNHGHTIGDGF 375 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTG 432 +R+ + L + + L ++ G E LL+L +E + + + + Sbjct: 376 LRAFAQRLKTAVTAPDLLGRVGGDEFLLLLRNVSSEQDAAERLERVLKTLDKPLEVEGHT 435 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 L A + + L ++ + + L Sbjct: 436 LRPSVSAGVAIYPCDSAHAADLRRHADHALYRAKEMGRDQ-YQFYSRN-RKKIDDDIALE 493 Query: 493 NTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 + L + +L+ QP + G + +L + G++ P FL + + L Sbjct: 494 RLLHRGLKENWFVLHYQPQMFADGGFFGVEALLRFQHPERGLLQPADFLSIAERNGLLHP 553 Query: 551 FDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 V+E + +VN+ + + + + R+ R + P+ + L Sbjct: 554 LGEWVIEEACRQHREWQSQGLPMLTMTVNVSAVQFNRPDFCESVERILLRQQMPPEYLEL 613 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE ++ E S+ +++L + G RIA+DDFGTGY++ L RL D++KID F++ Sbjct: 614 EITESLVMNDCEDSVAQMKRLKELGIRIAVDDFGTGYSSLSYLHRLPIDVLKIDRSFIEK 673 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + IV +I LA + L VVAE +E Q+ LL LG LQGYL + P Sbjct: 674 LQEPHGTLPIVEAIISLANSLHLQVVAEGIEHDFQRQLLRHLGAHRLQGYLYSQAIP 730 >UniRef50_Q1N3N5 Sensory box protein n=1 Tax=Bermanella marisrubri RepID=Q1N3N5_9GAMM Length = 764 Score = 593 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 70/507 (13%), Positives = 175/507 (34%), Gaps = 25/507 (4%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLL-----CTPYENDFIAGYLVPVFFII---FTLG 254 + + + + +L+ +I+GY + F L Sbjct: 253 TQKALNEQAQFGRLVFDNSGEGILIADAHRVIKAVNSAYCYISGYEQHEVIGLESDFLLK 312 Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS---FSVCLLYMVRI 311 L ++ ++ + ++ ++ + + + Sbjct: 313 ENPLDEKQRDIFKSIQRNGYWRGETWYKHKEGHAIAIEMMINTQKNSNNEIENYIVLFSD 372 Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQEAGKSFCCLRIDNLEFMSRHY 367 + QA D LT L N + Q ++ + + +DN + ++ Sbjct: 373 ITDKKQTQELIWQQAHYDNLTQLLNRHSFTQYTQNLIQKALPFALLFIDLDNFKQVNDTQ 432 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G + + + + ++E++ + + G E ++L G + + + + + S Sbjct: 433 GHNVGDALLIEAAKRIKQCVRESDIVARFGGDEFTVLLLGIKNVLSTKRICSDITKRLSE 492 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + +F + + L+ L ++ + + Sbjct: 493 PFTLDKEKAYVSASIGIAQFPWDSDNLEDLYKYADQAMYEAKHLGRNR-FSFFTHELQQK 551 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 +++ + +R AL++ + +Y QPI + + + ++ GI++P F+P+ Sbjct: 552 ASERQRISLDLRQALERNEFQVYYQPIVDLKSHQVHKAEALIRWHHPRDGIISPADFIPI 611 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL--LQKNIAGRIIRLFK 598 + L + + + S+N P+ Q++I + + Sbjct: 612 AEESGLIIEIGNWIFKQAAMQTKLWRKTLYPDFQISINKSPVQFYGNQEDIHQSWSQFLQ 671 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++ + +EITE + + + G ++++DDFGTGY+ LK+ D Sbjct: 672 IINLPGDGISVEITEGLLLDSIPIVKEKLSDFSQSGIQVSLDDFGTGYSALSYLKKFNID 731 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITD 685 IKID FV++IV + D ++ +I Sbjct: 732 YIKIDMSFVRNIVNDKYDLILCETIIA 758 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.188 0.665 Lambda K H 0.267 0.0576 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,462,162,468 Number of Sequences: 3077464 Number of extensions: 578935701 Number of successful extensions: 1748592 Number of sequences better than 1.0e-01: 1000 Number of HSP's better than 0.1 without gapping: 30332 Number of HSP's successfully gapped in prelim test: 23909 Number of HSP's that attempted gapping in prelim test: 1549978 Number of HSP's gapped (non-prelim): 102363 length of query: 729 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 593 effective length of database: 621,861,252 effective search space: 368763722436 effective search space used: 368763722436 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.6 bits) S2: 98 (41.9 bits)