BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (729 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobact... 1499 0.0 UniRef50_A7MP46 Putative uncharacterized protein n=2 Tax=Bacteri... 618 e-175 UniRef50_C8T3N0 Putative uncharacterized protein n=1 Tax=Klebsie... 535 e-150 UniRef50_D0ZFH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ed... 433 e-119 UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Se... 338 4e-91 UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobact... 311 5e-83 UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepI... 309 3e-82 UniRef50_C1MAR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ci... 258 7e-67 UniRef50_C1M7D0 Putative uncharacterized protein n=1 Tax=Citroba... 212 5e-53 UniRef50_C5BBK9 Cyclic diguanylate phosphodiesterase (EAL) n=2 T... 209 4e-52 UniRef50_A6AJX1 FOG: EAL domain protein n=3 Tax=Vibrio harveyi R... 174 2e-41 UniRef50_A8FQD1 Sensory box protein n=15 Tax=Shewanella RepID=A8... 167 2e-39 UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiester... 163 2e-38 UniRef50_A3JCF9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 163 3e-38 UniRef50_B4S311 Predicted signal transduction protein containing... 161 8e-38 UniRef50_A1S2J3 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 2e-37 UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 4e-37 UniRef50_Q2SAB8 Predicted signal transduction protein containing... 159 5e-37 UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylo... 158 7e-37 UniRef50_Q15NS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_Q6LLM3 Hipothetical sensory box/GGDEF family protein n=... 153 2e-35 UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiester... 153 2e-35 UniRef50_A8GZL9 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 3e-35 UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylo... 153 3e-35 UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase,... 152 4e-35 UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=B... 151 7e-35 UniRef50_A6FHQ7 PAS sensor diguanylate cyclase and phophodiester... 149 3e-34 UniRef50_A6AP12 FOG: EAL domain protein n=2 Tax=Vibrio harveyi R... 149 5e-34 UniRef50_A1SX34 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 8e-34 UniRef50_A0Y401 PAS sensor diguanylate cyclase/phophodiesterase ... 147 1e-33 UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 2e-33 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 146 3e-33 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 145 4e-33 UniRef50_Q8D5T3 FOG: EAL domain protein n=2 Tax=Vibrio vulnificu... 145 5e-33 UniRef50_B2HTC9 EAL domain protein n=14 Tax=Acinetobacter RepID=... 145 7e-33 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 145 7e-33 UniRef50_B4SPP4 Diguanylate cyclase/phosphodiesterase with PAS/P... 144 9e-33 UniRef50_Q7MQD8 Sensory box/GGDEF family protein n=54 Tax=Vibrio... 144 1e-32 UniRef50_C7RCU7 Diguanylate cyclase/phosphodiesterase with Chase... 144 1e-32 UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=N... 144 1e-32 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 144 1e-32 UniRef50_C6W9U5 Diguanylate cyclase/phosphodiesterase with PAS/P... 144 2e-32 UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/P... 144 2e-32 UniRef50_B9L207 Developmental regulator MorA n=1 Tax=Thermomicro... 143 2e-32 UniRef50_B0S9W4 Response regulator of a two component complex n=... 143 2e-32 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 143 2e-32 UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1... 143 3e-32 UniRef50_D0I367 Sensory box/GGDEF family protein n=1 Tax=Grimont... 142 4e-32 UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/P... 142 4e-32 UniRef50_C0N8Q5 Cyclic diguanylate phosphodiesterase domain prot... 142 4e-32 UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclass... 142 4e-32 UniRef50_D0SCY0 Putative uncharacterized protein n=2 Tax=Acineto... 142 4e-32 UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/P... 142 4e-32 UniRef50_A1TV44 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 142 5e-32 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 142 6e-32 UniRef50_A4G5U9 Putative uncharacterized protein n=1 Tax=Hermini... 142 7e-32 UniRef50_B9R245 Putative uncharacterized protein n=1 Tax=Labrenz... 141 1e-31 UniRef50_A6DCT5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 140 2e-31 UniRef50_Q1N0U8 Putative diguanylate cyclase/phosphodiesterase (... 140 2e-31 UniRef50_B1KCF3 Diguanylate cyclase/phosphodiesterase with PAS/P... 140 2e-31 UniRef50_C4Z459 Histidine ammonia-lyase n=1 Tax=Eubacterium elig... 140 2e-31 UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=En... 140 2e-31 UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas a... 140 2e-31 UniRef50_C8R1Y2 Response regulator receiver modulated diguanylat... 140 2e-31 UniRef50_A4XVP2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 139 3e-31 UniRef50_Q0G4W7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Fu... 139 3e-31 UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT ... 139 4e-31 UniRef50_C0N6V7 Cyclic diguanylate phosphodiesterase domain prot... 139 4e-31 UniRef50_C5T9Y9 Diguanylate cyclase/phosphodiesterase with extra... 139 4e-31 UniRef50_Q30QU6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ca... 139 5e-31 UniRef50_B8GPR3 Signal transduction protein n=2 Tax=Thioalkalivi... 139 5e-31 UniRef50_A6VX21 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 139 6e-31 UniRef50_Q31JC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 139 6e-31 UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Pho... 138 6e-31 UniRef50_Q2SJ14 Predicted signal transduction protein containing... 138 8e-31 UniRef50_A1K5I8 Conserved hypothetical membrane protein n=1 Tax=... 138 9e-31 UniRef50_B9ZQM9 Diguanylate cyclase/phosphodiesterase with PAS/P... 137 1e-30 UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/P... 137 1e-30 UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Ta... 137 2e-30 UniRef50_A3ISZ5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 137 2e-30 UniRef50_A6DBD8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 136 2e-30 UniRef50_C5AKX9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bu... 136 3e-30 UniRef50_A4Y0K2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 136 3e-30 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 136 4e-30 UniRef50_C3KBD8 Putative sensory box GGDEF/EAL domain protein n=... 135 4e-30 UniRef50_Q15NX4 Diguanylate cyclase/phosphodiesterase with PAS/P... 135 4e-30 UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 135 5e-30 UniRef50_C0QQ30 Signal transduction response regulator n=1 Tax=P... 135 6e-30 UniRef50_A9BVF0 Diguanylate cyclase/phosphodiesterase n=2 Tax=ce... 135 7e-30 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 135 8e-30 UniRef50_Q3ILC0 Putative orphan protein ; putative sensory-box d... 135 8e-30 UniRef50_C5BR51 PAS sensor diguanylate cyclase and phophodiester... 134 9e-30 UniRef50_Q31DY5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 134 9e-30 UniRef50_Q5ZVC2 Sensory box protein/GGDEF domain/EAL domain n=6 ... 134 1e-29 UniRef50_Q15QF9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 134 1e-29 UniRef50_A4BFV7 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 134 1e-29 UniRef50_Q1MXL3 Putative diguanylate cyclase/phosphodiesterase (... 134 1e-29 UniRef50_A1U0A2 Diguanylate cyclase/phosphodiesterase with PAS/P... 134 1e-29 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 134 1e-29 UniRef50_C0EE41 Putative uncharacterized protein n=1 Tax=Clostri... 134 1e-29 UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus... 134 1e-29 UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria R... 134 1e-29 UniRef50_C8QGW8 Diguanylate cyclase/phosphodiesterase withMHYT s... 134 1e-29 UniRef50_D0L072 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ha... 134 1e-29 UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 134 2e-29 UniRef50_B0TL03 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sh... 134 2e-29 UniRef50_B6BLQ9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 133 2e-29 UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitrati... 133 2e-29 UniRef50_Q1YVI9 Putative uncharacterized protein n=1 Tax=gamma p... 133 2e-29 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 133 2e-29 UniRef50_Q30TM0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Su... 133 2e-29 UniRef50_C0QQF8 Ggdef family protein n=1 Tax=Persephonella marin... 133 3e-29 UniRef50_D1B111 PAS sensor protein n=1 Tax=Sulfurospirillum dele... 133 3e-29 UniRef50_Q7MAP6 GGDEF FAMILY PROTEIN n=1 Tax=Wolinella succinoge... 132 3e-29 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 132 3e-29 UniRef50_B2JVY6 Diguanylate cyclase/phosphodiesterase with PAS/P... 132 3e-29 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 132 3e-29 UniRef50_A6LL12 Diguanylate cyclase/phosphodiesterase with PAS/P... 132 4e-29 UniRef50_Q1YRT2 Putative uncharacterized protein n=1 Tax=gamma p... 132 4e-29 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 132 5e-29 UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 132 5e-29 UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 132 5e-29 UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/P... 132 6e-29 UniRef50_UPI0001C31434 diguanylate cyclase/phosphodiesterase wit... 132 6e-29 UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase wit... 132 6e-29 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 132 6e-29 UniRef50_C8WAS4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Zy... 132 7e-29 UniRef50_C0QD16 Putative uncharacterized protein n=1 Tax=Desulfo... 132 7e-29 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 131 8e-29 UniRef50_B6BNW2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 131 9e-29 UniRef50_A8UTB3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 131 9e-29 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 131 1e-28 UniRef50_C7G9A4 Putative hybrid signal transduction histidine ki... 131 1e-28 UniRef50_C0QHY0 Signal transduction family protein (GGDEF domain... 131 1e-28 UniRef50_Q5P8V8 Predicted response regulator receiver n=1 Tax=Ar... 131 1e-28 UniRef50_D0IWU4 Diguanylate cyclase/phosphodiesterase with n=3 T... 131 1e-28 UniRef50_B4VZB0 Cyclic diguanylate phosphodiesterase (EAL) domai... 131 1e-28 UniRef50_Q3ID42 Putative uncharacterized protein n=2 Tax=Alterom... 131 1e-28 UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase... 131 1e-28 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 130 1e-28 UniRef50_B8GN37 Diguanylate cyclase/phosphodiesterase with PAS/P... 130 2e-28 UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine ... 130 2e-28 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 130 2e-28 UniRef50_Q2YZH5 Putative uncharacterized protein n=1 Tax=uncultu... 130 2e-28 UniRef50_A9KMR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 130 2e-28 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 130 2e-28 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 130 2e-28 UniRef50_C8XJV3 Diguanylate cyclase/phosphodiesterase with GAF s... 130 2e-28 UniRef50_C8WNQ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 130 3e-28 UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS... 129 3e-28 UniRef50_Q67KG5 Putative uncharacterized protein n=1 Tax=Symbiob... 129 3e-28 UniRef50_A6Q1F1 Signal transduction response regulator n=2 Tax=B... 129 3e-28 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 129 3e-28 UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythro... 129 3e-28 UniRef50_Q12JD4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sh... 129 4e-28 UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/P... 129 4e-28 UniRef50_D2SEK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 129 4e-28 UniRef50_C0CZP3 Putative uncharacterized protein n=1 Tax=Clostri... 129 4e-28 UniRef50_Q21LK5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 129 4e-28 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 129 5e-28 UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/P... 129 5e-28 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 129 5e-28 UniRef50_C6XCG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 129 5e-28 UniRef50_B0BZ23 Diguanylate cyclase/phosphodiesterase with PAS/P... 129 5e-28 UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 T... 129 6e-28 UniRef50_C1DD31 Predicted signal transduction protein containing... 129 6e-28 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 129 6e-28 UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/P... 128 6e-28 UniRef50_A2SC87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 128 7e-28 UniRef50_Q30UE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 128 7e-28 UniRef50_Q2L0X8 Putative signaling protein n=1 Tax=Bordetella av... 128 7e-28 UniRef50_Q1K3N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 128 8e-28 UniRef50_A8UQN5 Tyrosyl-tRNA synthetase n=2 Tax=Aquificaceae Rep... 128 8e-28 UniRef50_C7RRQ6 Response regulator receiver modulated diguanylat... 128 9e-28 UniRef50_Q2BRD7 Two-component response regulator n=1 Tax=Neptuni... 128 9e-28 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 128 9e-28 UniRef50_Q98I63 Mlr2546 protein n=1 Tax=Mesorhizobium loti RepID... 128 9e-28 UniRef50_Q21N07 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 128 1e-27 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 128 1e-27 UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Bu... 127 1e-27 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 127 1e-27 UniRef50_C4L2F5 Diguanylate cyclase/phosphodiesterase with PAS/P... 127 1e-27 UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 127 1e-27 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 127 1e-27 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 127 1e-27 UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 127 1e-27 UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 127 1e-27 UniRef50_Q30P66 Diguanylate cyclase/phosphodiesterase with PAS/P... 127 1e-27 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 127 1e-27 UniRef50_B8GQU5 Diguanylate cyclase/phosphodiesterase with PAS/P... 127 2e-27 UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiob... 127 2e-27 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 127 2e-27 UniRef50_A4WAU1 Diguanylate cyclase/phosphodiesterase n=2 Tax=En... 127 2e-27 UniRef50_Q7MQJ2 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 127 2e-27 UniRef50_B5JU45 PAS sensor diguanylate cyclase and phophodiester... 127 2e-27 UniRef50_C6AZA7 Diguanylate cyclase/phosphodiesterase n=12 Tax=R... 127 2e-27 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 127 2e-27 UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ol... 127 2e-27 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 127 2e-27 UniRef50_UPI0001AEC6AC sensory box/GGDEF family protein n=1 Tax=... 127 2e-27 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 126 2e-27 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 126 2e-27 UniRef50_A4SJC3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 126 2e-27 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 126 2e-27 UniRef50_Q89MX8 Blr4064 protein n=1 Tax=Bradyrhizobium japonicum... 126 3e-27 UniRef50_Q3JE85 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 126 3e-27 UniRef50_Q7MS36 Putative uncharacterized protein n=1 Tax=Wolinel... 126 3e-27 UniRef50_Q31HK1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 126 3e-27 UniRef50_B2V6C7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Su... 126 3e-27 UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 126 3e-27 UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/P... 126 3e-27 UniRef50_B7AQW5 Putative uncharacterized protein n=1 Tax=Bactero... 126 4e-27 UniRef50_Q73RG0 HAMP domain/GGDEF domain/EAL domain protein n=1 ... 126 4e-27 UniRef50_A8ERQ1 EAL/GGDEF/PAS domain protein n=1 Tax=Arcobacter ... 126 4e-27 UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonen... 126 4e-27 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 125 4e-27 UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromob... 125 4e-27 UniRef50_C9QFQ1 Sensory box/GGDEF family protein n=1 Tax=Vibrio ... 125 4e-27 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 125 4e-27 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 125 4e-27 UniRef50_Q0KDS7 Predicted signal transduction protein containing... 125 5e-27 UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 125 5e-27 UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacill... 125 5e-27 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 125 5e-27 UniRef50_A3UFJ0 Putative uncharacterized protein n=1 Tax=Oceanic... 125 5e-27 UniRef50_A3JH20 PAS sensor diguanylate cyclase and phophodiester... 125 5e-27 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 125 5e-27 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 125 5e-27 UniRef50_Q5QV37 Signaling protein with DMT-family integral membr... 125 6e-27 UniRef50_Q2SPM3 Predicted signal transduction protein containing... 125 6e-27 UniRef50_B1QUK2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Cl... 125 6e-27 UniRef50_B8KIK0 Diguanylate cyclaSe/phosphodiesterase with PAS/P... 125 6e-27 UniRef50_C1DVT2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Su... 125 6e-27 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 125 7e-27 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 125 7e-27 UniRef50_Q1N196 Putative uncharacterized protein n=1 Tax=Bermane... 125 7e-27 UniRef50_B4RSB4 PAS sensor diguanylate cyclase and phophodiester... 125 7e-27 UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/P... 125 7e-27 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 125 7e-27 UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acineto... 125 7e-27 UniRef50_Q7NZT0 Putative uncharacterized protein n=1 Tax=Chromob... 125 7e-27 UniRef50_A8EV16 EAL/PAS/GGDEF domain protein n=1 Tax=Arcobacter ... 125 7e-27 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 125 7e-27 UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfuro... 125 8e-27 UniRef50_A5PAA5 Sensory box/GGDEF family protein n=1 Tax=Erythro... 125 8e-27 UniRef50_Q47W00 GGDEF/EAL domain protein n=1 Tax=Colwellia psych... 125 8e-27 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 125 8e-27 UniRef50_A9L3T6 Diguanylate cyclase/phosphodiesterase n=12 Tax=S... 125 8e-27 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 124 9e-27 UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/P... 124 9e-27 >UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobacteriaceae RepID=YFEA_ECOLI Length = 729 Score = 1499 bits (3880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 729/729 (100%), Positives = 729/729 (100%) Query: 1 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG Sbjct: 1 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY Sbjct: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN Sbjct: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA Sbjct: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS Sbjct: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL Sbjct: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI Sbjct: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM Sbjct: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP Sbjct: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY Sbjct: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII Sbjct: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL Sbjct: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 Query: 721 IGRPQPLAD 729 IGRPQPLAD Sbjct: 721 IGRPQPLAD 729 >UniRef50_A7MP46 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A7MP46_ENTS8 Length = 735 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 330/698 (47%), Positives = 472/698 (67%), Gaps = 2/698 (0%) Query: 32 SPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLG 91 SP AI+ + I+L ++PL +ML+++++FG + P++ W F L+ Q + Sbjct: 34 SPKAIVDGAGIYLTFLPLSLMLAMIYLFGRYALFPLVITFLFFYGWFFPLNSQQLLAFIA 93 Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 S V+ CAILR G RWR+ ++ RLF GL+ P IK M + G + D+P Sbjct: 94 SFLLPVILTCAILRALKGPRWRFAISRHSTGLRLFLPGLLAPCLIKFLMVVSGYWLDYPE 153 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 IS++FG++ + ++VV + L A +I+ +FYY RM +S FA+ W R + P L E Sbjct: 154 VISSYFGESTSFYSVVTVQGLMAASVIFVDIFYYPVRMALSRAFARAFWHRCVIPLLAPE 213 Query: 212 KRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST 271 K+ W A + +LL+L P++ I+ Y +PV F++FT G+ + + L W+ S Sbjct: 214 KKVLAAGWFAGVFILLILFLLPFKLFLISIYTLPVIFVLFTAGIFLIGPVLITLLWSFSL 273 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 L LL + NFL + + LAF+L+ I+F+V + +M I+++SEW+ R++ + ALTDPL Sbjct: 274 LLLLGSSSNFLPAEKNGFLLAFMLSGFIAFTVSMRFMTVIFNKSEWMKRQYRMLALTDPL 333 Query: 332 TLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 T LPN RALE+ + +G + CCLR+ NLEF+SRHYGLMMR+ C + + LLP + E Sbjct: 334 TRLPNLRALERHLQGISGGALCCLRVANLEFLSRHYGLMMRIQCKKEVTTLLLPWLNTGE 393 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQ--E 449 K++QLP S+LL+ L+GPE + RL+H+V++LNS++I WN L++ Y AAW Q E Sbjct: 394 KVFQLPDSDLLIYLAGPEPQSRLRHLVDLLNSKRIQWNGAQLELDYSAAWAPVPRAQTPE 453 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 L +GQLS+LAE + V+AL+SR + +SGQT++ VL+L ++ AL +G + L+AQ Sbjct: 454 ELYRTIGQLSYLAEVAGPGDPVVALESRSQGLSGQTSEPVLMLQKVKQALSEGGVTLFAQ 513 Query: 510 PIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 PI+N +GEGY EILARL+ DG ++ P KF+PLI +FNLSARFD+QVLE LL +L THP Sbjct: 514 PIQNAQGEGYAEILARLECDGELIMPAKFIPLITRFNLSARFDMQVLEKLLIYLHTHPQT 573 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + G RFSVNLMPLTL Q+ IA + I LF+RY + AVILE+TEEQA S +E+++ NI Sbjct: 574 RPGARFSVNLMPLTLEQQGIAQQAIALFERYRVPISAVILEVTEEQALSGSENTVQNISL 633 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L GF IAIDDFGTGYAN+ERLK LQADIIKIDG F++++V+NT DA++V+SI DLAKA Sbjct: 634 LQARGFCIAIDDFGTGYANFERLKNLQADIIKIDGCFIRNVVSNTFDALVVKSICDLAKA 693 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +SL+VVAEFVET Q+ LL LGV+Y+QG+L GRP+ L Sbjct: 694 RSLTVVAEFVETPAQRDLLFALGVEYIQGHLPGRPERL 731 >UniRef50_C8T3N0 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T3N0_KLEPR Length = 538 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 259/530 (48%), Positives = 360/530 (67%), Gaps = 1/530 (0%) Query: 10 NIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLC 69 NIK LAF + +V I L+RFISP II + I++AW+P+ VM S++FIFG + P++ Sbjct: 8 NIKKTLLAFIICLVAIPLARFISPQTIIDGNLIYIAWLPISVMFSVIFIFGRYAIAPLIL 67 Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 TN + L+ Q ++L Q F V +CAILR +G RWR G T++++ R+FW G Sbjct: 68 AFAITNSFLIKLTLPQAFILLFCQLFAVFVSCAILRLLVGKRWRCGPTAKHMGARIFWGG 127 Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 P+ +K +MYL G +F FPL I+++FG I+TV+D+ SL +A LI+ YY RM Sbjct: 128 FFAPVLLKITMYLAGQYFAFPLAITSYFGSMPLIYTVIDIQSLISAALIFTTFLYYPMRM 187 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 I+SP +A+ W+++ P L + R+FTL W AL+V+L LLC PY+++FIAGYLVPV FI Sbjct: 188 IISPRYARRFWQQECLPWLAPQYRSFTLYWFIALAVILTLLCAPYQSEFIAGYLVPVIFI 247 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV 309 ++ +G+ ++ + L ++W+VS L+ YN+NFLQGV++EYSL+F+L+VLISF++CL YM Sbjct: 248 VYFIGISRIGHALLRISWSVSAFLLVVYNKNFLQGVQSEYSLSFVLSVLISFTICLFYMA 307 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGL 369 IY RS+ RRW QA DPLT LPN RALE + ++ C LRIDNL+F+SRHYGL Sbjct: 308 DIYARSDRNKRRWRSQAEEDPLTGLPNLRALESHLQSCPQQAICSLRIDNLDFLSRHYGL 367 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWN 429 MM V C R I R L PL+ +K++Q+PGSEL+LVL GPE RL HMV +LN ++ W+ Sbjct: 368 MMGVDCKRQIIRALQPLLGAADKVFQVPGSELILVLDGPEPSSRLNHMVAVLNHKKFSWH 427 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 N LD+ +GAAWGR DG E L +LGQLSWL+EQ+ + VLALD +++V QTT+QV Sbjct: 428 NQPLDLEFGAAWGRDDGQGEGLYQMLGQLSWLSEQAGSERRVLALDEEQDLVVDQTTEQV 487 Query: 490 LLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTP-DKF 538 LL ++ L L+LYAQPI+N EGEGY EIL R++ + P D F Sbjct: 488 RLLMRVKQVLKDRALMLYAQPIQNPEGEGYHEILTRMRVAIASLCPTDSF 537 >UniRef50_D0ZFH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZFH2_EDWTE Length = 740 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 262/733 (35%), Positives = 416/733 (56%), Gaps = 13/733 (1%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR 62 V + + + + L +L+V+L+ L+ F SP A+++ +FL +P+ + +++ +FG R Sbjct: 11 VMQRVTRCLGQYALPASLSVLLLPLTWFFSPHAVVNGQALFLLPLPMALAAALVMLFGPR 70 Query: 63 GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT---SR 119 + + + L LSF + + + + + LG R R L Sbjct: 71 ALPSLSLALLLFALLLPSLSFAGALALGCALLLPLSPIAHLSQRLLGKRGRCDLNRGGGT 130 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA-DAIFTVVDLLSLFTAVLI 178 + RL GL PIG M L G+ PL I T D F ++ L + + + Sbjct: 131 RLAIRLLGFGLFYPIGSWLMMLLGGTLMT-PLSIGTAAAPPRDLPFALLALEGMILSCVA 189 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS-WLAALSVLLLLLCTPYEND 237 YYL RM+++P + + D +L ++ R L ++AA+ L C P + Sbjct: 190 LTPALYYLLRMLLNPGSLRA-FLLDCRRALRRDIRGLFLPIYVAAMGAL----CFPPASH 244 Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 GYL P+ F++F RY + L WA++ L LL + NF+Q Y LAF+ + Sbjct: 245 VNLGYLTPLLFVLFVFASFHFRYRAVLLLWALTVLGLLACSANFIQLGNRHYQLAFLSSA 304 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALT--DPLTLLPNFRALEQAPEQEAGKSFCCL 355 LI+FS+ L+YM ++ R++ + R + L D L LPNFRAL + + C L Sbjct: 305 LIAFSIALVYMAQVITRNDRMRRLYLRLRLRRRDGLVDLPNFRALNDYLARRPCGTLCIL 364 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 R+ NL+ +SR +G+ MR + L PL++ E++YQ+PG+ELL+ L R+ Sbjct: 365 RLSNLDILSRCHGMTMRAATKSQLAAHLAPLLRPGERVYQMPGAELLIYLQADADLPRIN 424 Query: 416 HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + L ++ + W + + YG A+ FD +++++ ++GQLS+LAE++C + +L L Sbjct: 425 AIRATLIAQALVWQQHPVTLQYGVAYSPFDAHRQSIHAVVGQLSYLAERACRDNVILPLY 484 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTP 535 E + +QV L I AL + LLLYAQPI ++EG+ Y EILARL+ ++ P Sbjct: 485 GNEADANAAVNEQVFWLQKITRALQENALLLYAQPIVHREGQRYYEILARLQDGEQLVLP 544 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 KF+P I FNL A+FDL ++E++++ + D FSVNLMPLTL+Q +A +II Sbjct: 545 GKFIPFITAFNLCAQFDLLIIENVVRHIHRAGLDSSSTCFSVNLMPLTLMQNGVAAQIIA 604 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 LF+RY + PQAVI EITE+Q + +++ + L + F+IAIDDFGTG +NY+RLK L Sbjct: 605 LFERYQVRPQAVIFEITEQQYLLDENAALETVRALRDYCFKIAIDDFGTGLSNYQRLKHL 664 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 AD++KIDG+FVKDIV+++LD +I++SI D+A+ + L VVAE+VE+++Q +L LGVQY Sbjct: 665 NADVVKIDGMFVKDIVSSSLDRLIIKSICDIARERQLQVVAEYVESREQMEILCSLGVQY 724 Query: 716 LQGYLIGRPQPLA 728 LQG+L+G P+PLA Sbjct: 725 LQGFLLGEPRPLA 737 >UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Serratia proteamaculans 568 RepID=A8GHP9_SERP5 Length = 750 Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 216/715 (30%), Positives = 377/715 (52%), Gaps = 15/715 (2%) Query: 22 VVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR---GVVPVLCGMFCTNLWN 78 ++LI + ++SP ++ ++L ++PL +++L ++ WR G+ + + + L Sbjct: 34 LLLIPFAGWLSPRIMLPEGKVYLLYLPLAACIALLMVYDWRALPGITLAIMVRYASRLG- 92 Query: 79 FHLSFLQTAVMLGSQTFVVLCACAI-LRWQLGTRWRYGL-TSRYVWQRLFWLGLVTPIGI 136 L++ +++ S + L C + R Q RW V RL WL ++ + Sbjct: 93 -----LESGILVTSLYLLCLILCWLGYRSQTQRRWCAAPGVPTLVKARLIWLVVLPALLF 147 Query: 137 KCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA 196 + L+ + P ++ G++D + +V+ +L L LFY++ R++ P FA Sbjct: 148 VFGLKLLVALAQLPDELGMMPGNSDYLLALVNFQALLLGCLSAMPLFYFMLRLLNKPRFA 207 Query: 197 QILWRR---DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 LWRR ++AP K++ + L L ++ LL + GY + + + Sbjct: 208 LTLWRRFGREMAPQADKKELSLWLLVLVSMVALLSYYAKNSNPLLLGGYGLILLLPVMLY 267 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYH 313 G + Y F + W+ S L L + + Q ++LA I ++++ F++C+ M + Sbjct: 268 GAMRFGYQFNCIIWSSSLLVLFFHYPGYAQRDNLLHNLAVISSMMVVFTLCIYLMSALNT 327 Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 R + R AL DP+ LPN RAL++ + C LR+ L+ +SR+YG+ +R+ Sbjct: 328 RQRLSHARAQSAALQDPVIGLPNLRALKRDLTLSLPSTLCFLRVSELDLLSRNYGMQLRI 387 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGL 433 + + L ++ E +Y LPG +LLL + G ++E ++ + + L ++ WN L Sbjct: 388 RFKQQLAALLHQVLAPGEGVYHLPGYDLLLRVDGEDSEEKVLQIYHALEKFRLIWNGLPL 447 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 G + + + E L LLG+LS LAE S ++ + + V + ++V LL+ Sbjct: 448 HPPLGLGYCSVNADFEHLYLLLGELSSLAEVSLTSGKPESVQNGGQWVQEEIKRKVELLH 507 Query: 494 TIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYD-GGIMTPDKFLPLIAQFNLSARFD 552 ++ ALD +L AQPI G+ Y EIL R++ G I++P+ FLP+ +F L+ R D Sbjct: 508 GVQHALDNDGFILMAQPIVGLRGDRYHEILLRMRDTCGEIISPNDFLPVAHEFGLAYRLD 567 Query: 553 LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 L VL + LK++ + + RF+VNL P +L + + + L ++Y I P + LE+T Sbjct: 568 LWVLRNTLKFMDLYRAELPSARFAVNLSPSSLCRPMLRHDVNSLLEQYQIEPYQLTLEVT 627 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E + + N++ L + G RIA+DDFGTGYA+Y+RLK L D++KIDG FV+D++T Sbjct: 628 ESHLLQDTAYAGANLQALREIGCRIALDDFGTGYASYDRLKMLPVDMLKIDGSFVRDMLT 687 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 N +D ++ SI +A+ K L++VAE+VE+ +Q L +GV Y+QGY IG PQPL Sbjct: 688 NPVDFQVITSICKVARMKRLAIVAEYVESMEQLVALKGVGVDYMQGYFIGEPQPL 742 >UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobacteriaceae RepID=YFGF_ECOLI Length = 747 Score = 311 bits (797), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 212/711 (29%), Positives = 365/711 (51%), Gaps = 19/711 (2%) Query: 31 ISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVML 90 I+ A I S +FL ++PL +M+S++ F W + + G+F L F +T + Sbjct: 32 INTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKY--AELGFYETLSL- 88 Query: 91 GSQTFVVLCACAILRWQLGTRWRYGLT---SRYVWQRLFWLGLVTPIGIKCSMYLVGSFF 147 + F+++ +++ T R ++ +R + QR+FW +V P + ++ +F Sbjct: 89 -TANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFW-QIVFPATLFLILFQFAAFV 146 Query: 148 DFPLKISTFFGDAD-AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 G + T+++ +L LI L Y++ R++ +P + + + + Sbjct: 147 GLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQ 206 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYEND---FIAGYLVPVFFIIFTLGVGKLRYPFL 263 K + WL AL LLLLLC P F Y + + + G + Y + Sbjct: 207 VDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLI 266 Query: 264 NLTWAVSTLCLLNYNQNFLQ---GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 +L WAV + ++ QN++ G T+ L + + FS + YM + R + R Sbjct: 267 SLLWAVVLMISIHSYQNYIPIYPGYTTQ--LTITSSSYLVFSFIVNYMAVLATRQRAVVR 324 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 R A DP+ LPN RAL +A + C LRI +E + ++YG+M+R+ + + Sbjct: 325 RIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS 384 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAA 440 L PL++ E +YQL G++L L L+ + R+ + + L + W+ + G + Sbjct: 385 HWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVS 444 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM-VSGQTTKQVLLLNTIRTAL 499 + + LLG+L+ +AE S + + R M + + +V ++N ++ AL Sbjct: 445 YCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQAL 504 Query: 500 DQGDLLLYAQPIRNKEGEGYDEILARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLES 558 + L AQPI G+ Y EIL R+K + +++PD FLP+ +F LS+ D+ V+E Sbjct: 505 EHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEH 564 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 L+++A + RF++NL P ++ Q + +L +Y I +I E+TE A + Sbjct: 565 TLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT 624 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N + + ++ L + G +IAIDDFGTGYA+Y RLK + AD++KIDG F+++IV+N+LD Sbjct: 625 NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQ 684 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV SI LA+ K + VVAE+VE ++ + + LG+ Y+QGYLIG+PQPL D Sbjct: 685 IVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLID 735 >UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepID=B2VE87_ERWT9 Length = 749 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 224/704 (31%), Positives = 354/704 (50%), Gaps = 17/704 (2%) Query: 37 IHSSYIFLAWMPLCVMLSILFIFGWR---GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQ 93 I Y++L ++P+ +M+++L +F WR G+ LC + + Q V++G Sbjct: 38 ISDGYVYLIYLPIAMMIAMLMVFDWRAFPGIAVALCFHYLG-----RYTVPQVLVLVGMF 92 Query: 94 TFVVLCACAILRWQLGTRWRY--GLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 + R Q+ TRW G S+ V RL WL LV LV PL Sbjct: 93 LASLAAGWWGYRTQIKTRWSVSPGELSQ-VSIRLIWLVLVISTLFVILTQLVLPIGILPL 151 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL---WRRDIAPSL 208 S F D+ ++ +++ SL A L LFY+ R++ +P F +L +R I+ + Sbjct: 152 HYSVFVDDSFSLRALLNYQSLLLASLGTVPLFYFSLRLLRNPRFIIMLKNRCQRQISAGV 211 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 + L L +L ++L L +N Y +P+ + + Y F +L+W Sbjct: 212 TWREFLLWLVLLMSLLIMLTLFRANQDNLLTTEYGLPLLLPLMLWAALRFGYLFTSLSWG 271 Query: 269 VSTLCLLNYNQNFLQ-GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQAL 327 + + L F+ V Y+L I A L+ F++ +L M I R L R AL Sbjct: 272 ILLVVLYQLRDRFMDLTVMKPYNLLVISAYLLVFTLVILLMSAISTRQRQLLTRAKELAL 331 Query: 328 TDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 TDP+ LPN RAL + + S C LRI +L+ +SR YGL +R+ RS+ L P + Sbjct: 332 TDPIIGLPNLRALNKDLAFVSCSSLCFLRIPDLDRLSRTYGLRLRIQYKRSLAIYLRPNL 391 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 E +YQLPG +L++ L+ + R++ + + S + W+ + G ++ + Sbjct: 392 FAGESIYQLPGFDLVIRLNHAVLQSRIEELEARIKSYHLSWDGLPIHPDIGLSYCTVNTP 451 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALD-SREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 L LLG++S LAE S H + L S V T+++ +L+ I+ AL G L Sbjct: 452 VLHLYELLGEMSALAETSLRSGHAVNLQQSTNVTVQRHITEKLAMLHDIQFALQNGSFQL 511 Query: 507 YAQPIRNKEGEGYDEILARL-KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 +Q I G+ Y EIL R+ G + P F+P++ +F L+ D VLE L+++ Sbjct: 512 MSQKICGVRGDDYYEILLRMVNTQGEYIQPASFIPVVQEFGLTWEVDRMVLEQALRFIHR 571 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 H G RF++NL TL + + I K + + P +I+E+ E S+ Sbjct: 572 HRDRLPGIRFAINLFAATLCRPQLTEEIASSLKTHGVEPWQLIIEVKESPMLSDNSWGNR 631 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ QL K G R+AIDDFGTGYA+Y RLKR Q D++KIDG FV++++ N+LD I+ SI Sbjct: 632 SLAQLRKLGCRVAIDDFGTGYASYSRLKRAQVDMLKIDGSFVRNMLNNSLDYQIIVSICA 691 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +++ K + +VAEFV+T++ L KLGV YLQG ++G P PL D Sbjct: 692 VSRLKRMQIVAEFVQTEEVAEELRKLGVDYLQGEIVGMPIPLQD 735 >UniRef50_C1MAR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Citrobacter RepID=C1MAR9_9ENTR Length = 736 Score = 258 bits (658), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 216/747 (28%), Positives = 345/747 (46%), Gaps = 47/747 (6%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR 62 + N IKNI+ + L L + L+++++ +I++++ + + + L V + L +FG+R Sbjct: 5 INSNTIKNIREWCLPLVLPGLFYPLAQYLNGYSILNNTILTVYDLKLAVFSAALVLFGFR 64 Query: 63 GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSR--- 119 VL G L FL ++G Q V C I+ L T R Sbjct: 65 ----VLPGF---------LLFLTVMFVVGPQNERVDALCLIIASTLSYAAYRKFTGRRSC 111 Query: 120 -------YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV-----V 167 + RL WL G +YLV S D D I + V Sbjct: 112 VSFGRIKISFNRLLWL-----CGYNVLLYLVFSKLFAMFVAHGQRPDVDNIPALSLGMLV 166 Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + + L LFY + R+I P F R G +SW L L+ Sbjct: 167 RIQGIINGCLTGIPLFYKIYRIIRRPSFLLTFLRAIAEQCKGNIGVYGVISWCILLFFLM 226 Query: 228 LLLCTPYEND-FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-V 285 L +P D F + Y + + F + G K+ + F L W + + L +N +++ V Sbjct: 227 FFLTSPDNLDVFFSIYSLILLFPLMLWGAIKIGHLFTMLVWTIVLIILGKHNDSYIASDV 286 Query: 286 ETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 A + ++ FS+ ++ M + + + L LTDP+T + N RAL+ Sbjct: 287 NFMLHQALVSTLIFVFSLTIVIMGVLAKFTRQRFNQALLLGLTDPMTGMANLRALKTELF 346 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + C ++I LE SR YG R + + L + ++EK+Y G +LL+ L Sbjct: 347 TTERATVCLIQIPELELFSRRYGFHFRARYQKILAEHLRRHLVKSEKVYYHAGYDLLIRL 406 Query: 406 SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E RL + NS ++ +NN L G + + + + L+G+L +A S Sbjct: 407 ENGTWE-RLCDLYQAANSFRLFYNNHRLGFRSGLGYCLINDLSDDIYQLVGKLGMVAGLS 465 Query: 466 CAHHHVLALDSREEMVSG-QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG-YDEIL 523 + L+++ + G + + ++ ALD +L AQPI + GE Y EIL Sbjct: 466 LTNGRPENLEAQHSRILGNHIVDKTEIRTALQNALDNNAFVLMAQPIVSTHGEAPYHEIL 525 Query: 524 AR-LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLM 580 R L G + P+ FLP+ L+ DL V+E+ LK++ HP C FS+NL Sbjct: 526 IRMLNERGEFIPPNSFLPVAHDAGLAPDIDLWVIENTLKFMRNHPQHC------FSINLA 579 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P+T+ + NI +I +L Y + PQ +I EITE S+ E ++ + + + G R+AID Sbjct: 580 PVTVCRSNIVMKITQLLHDYAVEPQRIIFEITEADTLSDKEQTVETLRLIRQLGCRVAID 639 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+A++ RL ++ADI+KIDG F++ I + + IV S +A+ K + VVAEFVE Sbjct: 640 DFGTGFASHARLMNIEADILKIDGSFIRRITESEISYYIVESFCRVAEMKKMQVVAEFVE 699 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPL 727 QA L K+ V +LQGY IG+P PL Sbjct: 700 NATIQACLEKMNVGWLQGYHIGKPTPL 726 >UniRef50_C1M7D0 Putative uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M7D0_9ENTR Length = 740 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 186/714 (26%), Positives = 333/714 (46%), Gaps = 73/714 (10%) Query: 52 MLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTR 111 ++S L + + +P+L F L+++ LS + L +Q L + + + G R Sbjct: 57 LISALLVLYRQKALPILATFFLYALYSYSLS---SVFTLTAQLLAALISQTLYFFSTGKR 113 Query: 112 WRYGL-TSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL 170 S+ QR+ WL + C+ L S D + +T +FT+ L+ Sbjct: 114 GAVSFGRSQLTTQRIVWL-------VCCNALLFISI-DHWFQSNTASAPIANLFTLQTLI 165 Query: 171 SL---FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 +L + L Y L R + +P + + R+ A + + WL L ++ Sbjct: 166 NLQWLMNSCLTGIPFCYLLLRSVQNPAWCILYIRQVKALIKSGPPILYQVLWLVLLLCIM 225 Query: 228 LLLCTPYEN-----DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL------- 275 L E+ D+ +L+PV GV + + ++ W V+ L LL Sbjct: 226 SALIVIREDILIFTDYSLLWLLPVML----WGVICIGHALISPVW-VTMLILLGYYINSY 280 Query: 276 ----NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 NYN N+L + ++ F+ ++ I + L + H ++L R L ++P Sbjct: 281 IPPANYN-NYLHSLVISSTIVFVFSITIVVTGVL-----VVHNRKYLRRLKQLFR-SEPN 333 Query: 332 TLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 T LPNF+AL+ + A + C +R L + + +G+ R ++++ + L++ Sbjct: 334 TGLPNFQALQMDIRKHATECLCYIRCTELNTLEQTHGIEFRFEFVKALSAYVRKLIKGTG 393 Query: 392 KLYQLPGSELLLVLSG-PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +Y PG ++L L+ P+ + + LNS + W + L + G A+ T Sbjct: 394 DIYYAPGHGIILRLNAVPD----IPDLYKDLNSFRFIWKDYQLGLSCGMAY-------TT 442 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT-----TKQVLLLNTIRTALDQGDLL 505 + L+ LS + ++ + + ++S Q Q ++ + ++ A+D+ Sbjct: 443 EKNLIKNLSQAIKHLNTQSYISLMQGQPLLLSPQVPGDKIVSQAVIRHMLQKAIDRKSFE 502 Query: 506 LYAQPIRNK--------EGEG---YDEILARLK-YDGGIMTPDKFLPLIAQFNLSARFDL 553 L AQPI + G Y EIL R+K DG ++ PD LP+ + L D+ Sbjct: 503 LMAQPIVSTMLVVQPIVSTTGLTRYHEILIRIKMVDGKLIFPDTILPVAREAGLLPALDI 562 Query: 554 QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 V+E +++ + FS+NL P +L + + + LF++Y I+P+ +I E+ E Sbjct: 563 TVIEQTFRFIQSRQKSDPNSHFSINLTPDSLNKIDFLDNVFTLFRKYSIAPERIIFEVIE 622 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 NA + + L K G +IAIDDFGTG ++Y RL+ L ADI+KIDG F+++I+T+ Sbjct: 623 SDIIDNANVTDV-LRALRKAGSKIAIDDFGTGASSYSRLRTLDADILKIDGSFIRNILTD 681 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VRS ++AK K++ VVAEFVE ++ + +L +G+ +LQGY IG+P P+ Sbjct: 682 EFSRCAVRSFCEVAKLKNMEVVAEFVENEEIEKMLITMGIGWLQGYHIGKPVPI 735 >UniRef50_C5BBK9 Cyclic diguanylate phosphodiesterase (EAL) n=2 Tax=Edwardsiella RepID=C5BBK9_EDWI9 Length = 723 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 193/730 (26%), Positives = 341/730 (46%), Gaps = 43/730 (5%) Query: 21 TVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFH 80 +++I LS SP I+ + +L + L++ F+FG R + P M L + Sbjct: 4 ALLVIPLSILYSPRVILPNGQAYLIALLPAAALALSFLFGSRILAP----MMIVTLATLY 59 Query: 81 LSFLQT---AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVW-QRLFWLG------- 129 L++ T AV L ++LC + G RWR GLT ++ RLFWL Sbjct: 60 LAYGMTPLLAVGLPFSLTLLLCWWGYTQ-HAGLRWRAGLTKPHLMLPRLFWLAGMFPLLF 118 Query: 130 -LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR 188 L+T I + M+ FF L S + T+ + + L+ L+Y+L R Sbjct: 119 ILLTQIVVTMGMFSGHPFFAERLPFS--------LSTLTNYQGMVLGALVGAPLYYHLLR 170 Query: 189 MIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE-------NDFIAG 241 ++ P + Q++ R G W ++V++ LLC + D+ Sbjct: 171 LLRRPRYWQVMRSRCRREKTGDATGWEFCLWGGVVAVMIALLCIRAQAQGSILFTDYTLA 230 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLT--WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 L+PV +IF G +RY +L T W+V+ + LL + +++ + ++ F+ A+LI Sbjct: 231 LLLPV--MIF----GAMRYGYLLSTQVWSVAVMILLFNYEGYVEPDDLGRNICFVTAMLI 284 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDN 359 F++ ++ M I R L R A+ DP+ LPN LEQ + C +RI + Sbjct: 285 VFTLTVILMAAINGRQRRLYRYMRRAAMIDPVVQLPNVGCLEQDLQHYGRSVLCFIRISS 344 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 L+ + R YG+ +R+ + + ++ +E++Y LPG +LL+ L + L+ + Sbjct: 345 LDTLCRTYGMQLRLSYKQRLAAAFRAVLHADERVYHLPGYDLLIRLEPGRAQQTLRRLEQ 404 Query: 420 ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + ++ ++ WN L G ++ G E L L+G+LS +AEQS + +L + Sbjct: 405 VAHAFRLQWNGLPLQRQLGLSYCSVPGTVEALYSLIGELSAMAEQSLDSGRLESLALNQR 464 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARL-KYDGGIMTPDKF 538 + ++ LL T++ AL+ +L AQPI GE Y EIL ++ GG ++P+ F Sbjct: 465 RLQQGIDRKASLLRTLQRALENDRFILSAQPIEGFRGESYQEILLKMVDEQGGYLSPESF 524 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 LP+ +F L+A D +L L ++ H G R ++ L L + + + Sbjct: 525 LPVAEEFGLTATLDRWILTHTLAFIGQHRAQLPGIRVAIPLSCAGLSPPTLPALLESVLG 584 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 +Y I P +IL EQ + A + + G IA++ +A + + L AD Sbjct: 585 QYRIEPWQLILTFRAEQLAALAPAPSALSALRAQ-GCHIALNGIDFVHAGGQP-ESLDAD 642 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 I+++ + + ++ + IV ++ +A + +VVA V++ Q+A L +LGV +QG Sbjct: 643 ILQMTPALSRRLGAHSAEQYIVTALCQVAHLRRQTVVARAVDSDAQRARLKQLGVDAIQG 702 Query: 719 YLIGRPQPLA 728 L+G P PL+ Sbjct: 703 RLVGAPVPLS 712 >UniRef50_A6AJX1 FOG: EAL domain protein n=3 Tax=Vibrio harveyi RepID=A6AJX1_VIBHA Length = 741 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 170/625 (27%), Positives = 272/625 (43%), Gaps = 49/625 (7%) Query: 133 PIGIKCSMYLV--GSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMI 190 P + S++ V G F F I + T VD L L Y L YLT+++ Sbjct: 115 PAAQRISLFFVIMGCLFPFANTIKIML-----VNTFVDGQFLSPDFLFYATLGNYLTQLL 169 Query: 191 VSP---HFAQILWRRDIAPSLGKEKRAFT--------LSWLAALSVLLLLLCTPYENDFI 239 V+P +L D L +KR L+WLA+ + + + F+ Sbjct: 170 VTPILYVLVSLLTDTDTQSYLALDKRLRISNSRCRGYLAWLAS-CIAIFIAAALSSTSFM 228 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLL-------NYNQNFLQGVETEYSLA 292 L FF + + VG ++ + + S LL +YNQ + G + Y L Sbjct: 229 LNSLS--FFAVLLVVVGLAKHGLIRPLFVGSPFILLIINDGISHYNQALI-GDKQFYGLL 285 Query: 293 FILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS 351 I+ VL + + L Y V+++ ++ R + DP + L N L++ ++ Sbjct: 286 IIITVLTTLAYLLGGYSVKLFEMTQKQIRSERI----DPYSGLSNIAQLKEDISHQSRSL 341 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS--GPE 409 L + M G + I + L + Y+ P S LL + Sbjct: 342 LIYLDLTPTLSMLTDLGHEGKSQLIMQLSEFLYSRNNSINRCYRPPFSTGLLSFTHYSDT 401 Query: 410 TEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 E L + L S Q +W T + + + + ++ ++ L QS + Sbjct: 402 AEEDLNEVAEYLESFQFYWRGTSVALVSPTIFCTLVSQDQDIEKVVSILCDQPPQSDSSI 461 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGEGYD---EILAR 525 H + + S E +V LN I+ + L+ QP ++ E E E+L R Sbjct: 462 HWINIQSFE-------MDRVDKLNHIQQVFKREQFELFCQPYMKLSESEPSKHSFEVLLR 514 Query: 526 LK-YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLT 583 LK DG ++ P F PLI QF L + D V+ + + L+ + ++NL T Sbjct: 515 LKEQDGKVLPPSAFFPLINQFGLELKLDHWVILNTFRMLSDKVKNWNNIGHCAINLTAKT 574 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L +N+A RII + + I + EITE A N + ++ N+ L G +IAIDDFG Sbjct: 575 LSAENLAVRIIESAQSFSIPLNKICFEITESSALINEQQAIANLSHLRDHGCKIAIDDFG 634 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGYA++ L+RL DI+KI+G FV++I + D +IV SI +AK L VAEFVE+ Sbjct: 635 TGYASFAYLRRLPLDILKIEGAFVREITQSETDRLIVSSIVTVAKEMHLETVAEFVESTA 694 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 A+L LG+ + QGY + +P PL+ Sbjct: 695 HIAILRNLGIDFAQGYGVAKPMPLS 719 >UniRef50_A8FQD1 Sensory box protein n=15 Tax=Shewanella RepID=A8FQD1_SHESH Length = 870 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 127/435 (29%), Positives = 203/435 (46%), Gaps = 18/435 (4%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----EAGKSFCCLRIDNLEFM 363 ++R R E L R+ +A D +T L N RA E+ E+ + C ++ + + Sbjct: 414 VLRDITREELLKRQLRQKANFDSITSLLNRRAFEERLEKFSHDAQSIAICYFDLEQFKLI 473 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + + + + ++E L +L G E L + Q + I++S Sbjct: 474 NDSCGHSAGDTMLAMVAKAMQSCLSKDEMLARLGGDEFGLAIRDHNASEVAQLVKRIVSS 533 Query: 424 --RQIHWNN-----TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 Q+ +N G+ G A + +E ++ ++ +A + + V D Sbjct: 534 VSMQVLRDNGCHYKVGVSAGVAIARAPYISPKELIKD--ADVACIAAKRKGSNQVHFYDD 591 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD-GGI 532 ++ Q + + I A++ +LLLY QPI+ E + EIL R++ G I Sbjct: 592 NDKESIYQRNAPMWAVR-IGQAIEHNELLLYYQPIKGMGPGEHKQRMEILLRIQEPCGRI 650 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGR 592 ++P +F+ +F L D +V+ WL+ H S+NL +L + + Sbjct: 651 LSPAQFIEAAERFKLMNDVDKEVIRKAFLWLSLHEEIWDDHCISINLSGNSLGAEGMVEY 710 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 I FKR+ I + + EITE A N +M + L K GF A+DDFGTG+A+Y L Sbjct: 711 IAEQFKRFEIPSKCICFEITETSAIQNRNRAMDMLNYLRKLGFSFALDDFGTGFASYGYL 770 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K L D +KIDG FVK + TN D IV+SI D+ + VAEFVE Q L +G Sbjct: 771 KELPVDYVKIDGCFVKSLATNAKDFAIVKSIHDVCDVMGIETVAEFVENQDIIDRLEDIG 830 Query: 713 VQYLQGYLIGRPQPL 727 + Y QGY IGRP+PL Sbjct: 831 INYAQGYAIGRPKPL 845 >UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiesterase n=2 Tax=Moritella sp. PE36 RepID=A6F7G4_9GAMM Length = 911 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 108/387 (27%), Positives = 195/387 (50%), Gaps = 15/387 (3%) Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-TE 411 C L +D + ++ G +R I + ++ N+ L +L G E +++ + TE Sbjct: 518 CFLDLDQFKIINDTCGHAAGDELLRQIAGLIGDNLKPNDTLARLGGDEFAVLMRDCQLTE 577 Query: 412 GRL--QHMVNILNSRQIHWNNT----GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + +++ + Q W + G+ +G E L + L+ A + Sbjct: 578 AVVAANEILDKVKKFQFIWKKSCFSVGVSIGVAEICNTSGNTSEVL--IHADLACYAAKD 635 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEI 522 + V +E+++ + + +N I+ AL++ LYAQPI ++ + E+ Sbjct: 636 LGRNRVHTYHDNDELLTARD-DEFRWVNEIKEALNEDRFELYAQPIVALQDTAQKPIFEV 694 Query: 523 LARLK-YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLM 580 L R++ +G +++P FLP+ ++NLS D V++ L+W+ H S+NL Sbjct: 695 LLRMQDKNGALISPGVFLPIAERYNLSEPIDRWVIDRTLQWMKAHSQQLDMFDHISINLS 754 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 +L ++ I+ + +SPQ ++ EITE A SN S+ I L FG + A+D Sbjct: 755 GASLGDSDLLQHIMTTITQAKVSPQQIMFEITETAAISNLASATIFINTLSTFGCQFALD 814 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFG+G +++ LK L + +KIDG+F+KDI+TN +DA +V+SI ++ L +AEFVE Sbjct: 815 DFGSGLSSFAYLKNLPVNTLKIDGIFIKDILTNPIDAAMVKSINEIGHLMKLKTIAEFVE 874 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPL 727 + + +G+ + QGY IG+PQP+ Sbjct: 875 NDAIKQKVETIGIDFAQGYGIGKPQPI 901 >UniRef50_A3JCF9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A3JCF9_9ALTE Length = 1133 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 131/443 (29%), Positives = 205/443 (46%), Gaps = 42/443 (9%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALE-------QAPEQEAGKSFCC-LRIDNLEFMSRH 366 S+ L ++ QA+ DPLT L N R E Q E A + C L +D + ++ Sbjct: 692 SKLLQQQLSFQAIHDPLTGLINRREFERSLQSLIQDVEHNASEHLLCYLDLDQFKIVNDT 751 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGR--LQHMVNILNS 423 G ++ + TL PL+++++ L +L G E ++LS P +G+ + + + Sbjct: 752 CGHQAGDELLKQLANTLKPLLRQSDILARLGGDEFGVLLSHCPLNQGQEIAEQLREAVCG 811 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL--LGQLSWLAEQSC--------AHHHVLA 473 W+ +G G QP LG + A+ +C H+ Sbjct: 812 FHFSWDGQVFAVGVSI------GIVHLTQPCGDLGIMLSKADTACYLAKNLGRNRVHLHL 865 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD----EILARLKYD 529 DS E + T QV +N IR AL++ L+ QPI + D EIL RLK Sbjct: 866 PDSSEVKLQ---TDQVQWVNRIRQALNEDHFRLFCQPIMALDQADADPTHYEILLRLKDA 922 Query: 530 GGIMTP-DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF----SVNLMPLTL 584 G M P FLP +FNL + DL V+ + L W+ +G ++NL ++ Sbjct: 923 RGHMVPPGAFLPSAERFNLMPQIDLWVIRNTLAWMGGQ---LRGSHLDLHCAINLSGASI 979 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 I ++ + V EITE A ++ + + I +L G + A+DDFG+ Sbjct: 980 GHPECLQTIREQLTKHRVPAHRVCFEITETTAMADLKKAQDFIGELRTLGCKFALDDFGS 1039 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 G +++ L+ L D +KIDG+F++++ + +D IV SI + L VAEFVE Sbjct: 1040 GLSSFGYLRHLSVDYLKIDGIFIRELAQSPIDRAIVDSINTIGHIMGLKTVAEFVEDGAT 1099 Query: 705 QALLHKLGVQYLQGYLIGRPQPL 727 +LH+LGV Y QGY +GRPQPL Sbjct: 1100 HEILHQLGVDYAQGYHLGRPQPL 1122 >UniRef50_B4S311 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=4 Tax=Alteromonas macleodii RepID=B4S311_ALTMD Length = 945 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 117/424 (27%), Positives = 209/424 (49%), Gaps = 25/424 (5%) Query: 326 ALTDPLTLLPNFRALE----QAPEQEAGKSFCCL--RIDNLEFMSRHYGLMMRVHCIRSI 379 A D LT + N R E + Q++ C L +D + ++ G I+ I Sbjct: 523 ATHDSLTGVYNRRQFETDFREKLSQKSDIPVCILFMDLDRFKVVNDTCGHKAGDVLIKDI 582 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIH---WNNTGLDMG 436 R + + + L +L G E ++ + + + V ILN+ Q + W+N ++G Sbjct: 583 ARLIENTLHDEALLARLGGDEFGVIYTDVDANEVYLNAVKILNAVQAYRFMWDNRIFNLG 642 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSC------AHHHVLALDSREEMVSGQTTKQVL 490 E + GQ +A+ +C + V + +E + + +++ Sbjct: 643 VSIGMVVC----EDTEVNAGQYLSMADAACYFAKEQGRNQVHRYNKDDESMQ-RYQRELD 697 Query: 491 LLNTIRTALDQGDLLLYAQPIR--NKEGEG-YDEILARLK-YDGGIMTPDKFLPLIAQFN 546 +++I AL++G LY Q +R N+ +G Y E+L RL+ +G ++ P FLP +F Sbjct: 698 WVSSINNALEEGRFELYYQSLRPLNQTTDGHYYEVLLRLREKNGNLVEPANFLPTAERFE 757 Query: 547 LSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 ++ D V+ + KWL+ +P + R S+NL +L ++ I+ F+ ++I Sbjct: 758 MNVNVDKWVVTNTFKWLSENPEHLAELKRCSINLNCHSLADRDFTLFILNAFETFNIPYN 817 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 V E+ E A E ++ + ++ G A+DDFG+G+++Y LK L + +KIDG+ Sbjct: 818 KVCFEVIESVAIIKMEDTLSFMRTFNRLGCSFALDDFGSGFSSYSYLKSLPVNQVKIDGM 877 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 F+KD++ +++D +V SI D+AKA + V EFVE + A L K+GV + QGY + +P Sbjct: 878 FIKDMLNDSVDTAMVASINDVAKAMGMQTVGEFVENEGTLAQLGKMGVDFAQGYGVAKPA 937 Query: 726 PLAD 729 PL D Sbjct: 938 PLRD 941 >UniRef50_A1S2J3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S2J3_SHEAM Length = 837 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 131/452 (28%), Positives = 203/452 (44%), Gaps = 44/452 (9%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ-----APEQEAGKSFCCLRIDNL 360 L +R E L QA D +T LPN E A QE + C L ++ Sbjct: 392 LLALRDVTAEERLKSELRRQAEEDAVTGLPNRTTFEARMKRLASGQET-VALCYLDLEQF 450 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV-- 418 + ++ G + + + +T + E L ++ G E ++L G R H V Sbjct: 451 KIINDSCGHLEGDRMLCMVAKTFQSCLAPGELLGRVGGDEFGILLLG-----RSAHEVAL 505 Query: 419 -----------NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC- 466 +L S Q + G+ +G A P +G+L A+ +C Sbjct: 506 LLKTLQQKLSMQVLES-QGQCHRVGVSIGVAFARAPL--------PPVGELFKDADIACV 556 Query: 467 -----AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD- 520 + + D +++ ++ Q L I A+ +L LY QPI + G Sbjct: 557 AAKQKGSNQIHFYDDKDKELNYQRNAPKWALR-IAKAIHNRELELYFQPIHSLHGGSPRK 615 Query: 521 --EILARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSV 577 EIL R++ G I+ P +F+ +F L D V+ ++WLA HP S+ Sbjct: 616 RMEILLRIRESNGRILPPAQFIASAERFKLMPEVDKAVVSMAMEWLAAHPNFWHDHCLSI 675 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL +L + + I+ +R I P + EITE A N + ++ + L K GF Sbjct: 676 NLSGNSLGVEGMESFIVEQLQRNGIPPACICFEITETTAIQNRQRALDMLRSLRKQGFAF 735 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFG+G+A+Y L+ L D +KIDG FV+ + +N D IV+SI D+ + VAE Sbjct: 736 AIDDFGSGFASYGYLRELPVDYVKIDGCFVRQLASNAKDYAIVKSIHDVCSVMGIETVAE 795 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 FVE+Q A L ++G+ Y QGY +GRP+PL D Sbjct: 796 FVESQDIMARLEEIGINYAQGYAVGRPKPLKD 827 >UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTY7_THISH Length = 808 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 124/435 (28%), Positives = 201/435 (46%), Gaps = 30/435 (6%) Query: 318 LNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGL 369 + R+ QA D LT L N R ALE A + C + +D + ++ G Sbjct: 372 MARQLSHQARHDALTGLINRREFEDRVREALESARRSSRSHALCYIDLDQFKVVNDTCGH 431 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL---QHMVNILNSRQI 426 + +R + L +++ + L +L G E L+L + L ++ + + Sbjct: 432 VAGDELLRQLAAALPRHIRDTDTLARLGGDEFGLLLENCPLDRALSICHQLLAEVAELRF 491 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 W D+G DG +L +L + A+ +C +V R + + Sbjct: 492 MWQGRRFDVGMSIGLVAIDGASASLSEVLSE----ADSAC---YVAKEQGRNRVYVSRPG 544 Query: 487 KQVLL--------LNTIRTALDQGDLLLYAQPIRNKEGEG--YDEILARLK-YDGGIMTP 535 Q L L IR A+++ LY QPIR GEG + EIL RLK DG ++ P Sbjct: 545 DQALKTRFGEMEWLGRIREAMEEERFELYCQPIRPISGEGVPHFEILLRLKAEDGSLVEP 604 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRII 594 F+P ++NL + D V+ S+ LA K+ +NL +L Q+++ + Sbjct: 605 GAFIPAAERYNLMPQVDRHVIRSVFAMLADSDFALKQHAIVGINLSGQSLGQEDLLDFVT 664 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 Y + EITE A +N S+ I +L G A+DDFG+G +++ LK Sbjct: 665 EALHYYGLPAHRFCFEITETAAIANLSSAAGFIRELRDMGCAFALDDFGSGLSSFNYLKH 724 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 + D +KIDG FV+D++T+ +DA +V +I + + + +AEFVE++ L ++GV Sbjct: 725 MPVDYLKIDGSFVQDVLTDPVDAAMVGAIHRIGRVLGVKTIAEFVESEAVLEHLREIGVD 784 Query: 715 YLQGYLIGRPQPLAD 729 Y QGY IGRP+P D Sbjct: 785 YAQGYGIGRPKPFRD 799 >UniRef50_Q2SAB8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAB8_HAHCH Length = 966 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 124/439 (28%), Positives = 211/439 (48%), Gaps = 23/439 (5%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPN-----FR---ALEQAPEQEAGKSFCCLRIDN 359 +V I + E ++ H A DPLT L N +R AL ++ EQ + + +D Sbjct: 532 IVDITEKKEN-EQQLHYLARHDPLTGLLNRTEFEYRLNNALVRSREQGLQHALLFMDLDQ 590 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE--LLLVLSGPETEGRLQH- 416 + ++ G +R I ++E + L +L G E +LL G E + H Sbjct: 591 FKIVNDTSGHAAGDELLRQIAVMFRQHLRERDSLARLGGDEFGILLERCGIEKASEIAHR 650 Query: 417 MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL--LGQLSWLAEQSCAHHHVLAL 474 + N ++ + +G +++ + L + A + + ++ Sbjct: 651 LRNEVSEFRFALKEKVFSVGVSIGIVPITAATPSIEEIFSLADTACYAAKDAGRNRIIVH 710 Query: 475 DSRE-EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR----NKEGEGYDEILARLKYD 529 + + E++ Q+ QV+ ++ A+ Q L+LY Q I GE Y EIL RLK Sbjct: 711 NEKTGEIIRRQSEMQVV--TALQEAIKQNQLVLYKQNIGALKPELRGERY-EILVRLKQG 767 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKN 588 I+ P FLP ++N+ D V+++ KWL P ++ + ++NL T+ Sbjct: 768 ADILPPGAFLPAAERYNIIRSLDRWVIDAYFKWLHARPGQLERLSQVNINLSSQTINDSE 827 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 A ++ F +Y I V EITE A S+ + ++ + G + A+DDFG+G+++ Sbjct: 828 FADFLLTAFTKYSIPLDKVCFEITESSAISSLVETTALVQNMRAKGIKFALDDFGSGFSS 887 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 Y LK L + +KIDG FV+DI+++ +D +VRSIT++A L+VVAEFVE ++ L Sbjct: 888 YSYLKSLPVNSLKIDGSFVRDILSDPVDLAMVRSITEVAHIMGLNVVAEFVENEETVERL 947 Query: 709 HKLGVQYLQGYLIGRPQPL 727 L V ++QGY I +P PL Sbjct: 948 KSLDVDFVQGYHIHKPMPL 966 >UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D2_9GAMM Length = 1203 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 116/426 (27%), Positives = 198/426 (46%), Gaps = 25/426 (5%) Query: 325 QALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT L N R + A + C L +D + ++ G + + Sbjct: 776 QATHDQLTGLINRHEFDLRLERVVLAAKHNLTEHALCFLDLDQFKLVNDTCGHIAGDELL 835 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVL---SGPETEGRLQHMVNILNSRQIHWNNTGL 433 R I L ++ + + +L G E +++ S + ++ +L + HW + Sbjct: 836 RQIGSLLQSNVRSRDTIARLGGDEFAVLMEHCSIDRAYKACEQILQLLQDFRFHWQDYTF 895 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC-----AHHHVLALDSREEMVSGQTTKQ 488 +G D + L + + +C A + + + + + Q + Sbjct: 896 TVGGSIGLAIIDQHTRDSNEALKHV----DTACYSAKDAGRNRVEVHREDSLRLKQRRGE 951 Query: 489 VLLLNTIRTALDQGDLLLYAQPIR---NKE-GEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + I ALD LLYAQPI+ N E G Y+ ++ L+ DG I P FLP + Sbjct: 952 IHWSTEINDALDDDRFLLYAQPIQPVMNPERGMSYEVLVRMLRKDGEISPPGAFLPAAER 1011 Query: 545 FNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 +N R D V+ WL + K S+NL L++ +++ II + I Sbjct: 1012 YNSINRIDRWVVSHTFDWLNKNAAKLNKVATVSINLSGLSMGDESMLTFIIEQLETAKIP 1071 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + + EITE A +N ++ IE L + G ++DDFG+G +++ LK+L+ D +KID Sbjct: 1072 AEKIKFEITETAAIANLRAATKFIETLRESGIHFSLDDFGSGLSSFAYLKKLKVDSLKID 1131 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 G+FVKD++ + LD +V+SI ++ L +AEFVE++ A L ++GV ++QGY IG+ Sbjct: 1132 GMFVKDMLIDPLDFEMVKSINEIGHVMGLETIAEFVESEAILAKLSEIGVDFVQGYAIGK 1191 Query: 724 PQPLAD 729 P P+ D Sbjct: 1192 PAPIDD 1197 >UniRef50_Q15NS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NS8_PSEA6 Length = 965 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 108/399 (27%), Positives = 200/399 (50%), Gaps = 17/399 (4%) Query: 343 APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 A +Q+ + + ID + ++ +G +R + + + ++ ++ + +L G E Sbjct: 556 AKQQQEELTLLHVNIDQFKAINDTHGHKAGDAVLRQLSQLMKKIVSDDGMIGRLGGDEFG 615 Query: 403 LVLSGPETEGRLQHMVNILNSRQIH---WNNTGLDMGYG---AAWGRFDGNQETLQPLLG 456 ++L G + +LN+ Q+H W L +G W + E L + Sbjct: 616 ILLVGNNAQNSFMLANKLLNAVQVHEFTWEERPLTLGVSIGQVPWNDTISSSEQLLSMAD 675 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP----IR 512 ++A++ + + S ++ ++ + Q+ L I+ AL L+ QP Sbjct: 676 SACYMAKKH-GRNRLHTYSSTDKQIA-KYESQLSWLPRIQHALSHNGFELHCQPYMPMTS 733 Query: 513 NKEGEGYDEILARL--KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 +G Y EIL RL ++D I+ P +FLP ++NLSA+ D V+++ WLA +P K Sbjct: 734 IAKGHHY-EILLRLVDEHDQRIL-PSEFLPAAERYNLSAKIDRWVIDTYFAWLAQNPQHK 791 Query: 571 KG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 R ++NL +L ++++ I+ F++Y + + EITE A + ++ I+ Sbjct: 792 ADLMRCNINLSGHSLGEQDLKLFILSAFEKYQVPHNKICFEITESMAILKLDETIEFIDT 851 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 G A+DDFG+G+++Y LK L D +KIDG FVK+I+ +D +V SI D+A A Sbjct: 852 FKALGCTFALDDFGSGFSSYNYLKNLPVDQVKIDGEFVKNILIAPVDMAMVNSIKDIASA 911 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + VAE+VE+++ L K+GV ++QG+ + +P L+ Sbjct: 912 MKIQTVAEYVESKEIMVELGKIGVDFVQGFGVNKPISLS 950 >UniRef50_Q6LLM3 Hipothetical sensory box/GGDEF family protein n=4 Tax=Vibrionaceae RepID=Q6LLM3_PHOPR Length = 1052 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 21/431 (4%) Query: 318 LNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGL 369 L + QA D LT L N E +A E E + + +D + ++ G Sbjct: 611 LEEKLEYQACHDYLTGLFNRNYFETQLENVLVEAREHETRHAMFYIDLDQFKVINDTAGH 670 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL---SGPETEGRLQHMVNILNSRQI 426 ++ + L + E+ L +L G E ++L + E ++++L + Sbjct: 671 EAGDEALKQVALLLQEITPEHATLSRLGGDEFAIILRHCTQHEAVTFGDEILHLLEGAEF 730 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS---WLAEQSCAHHHVLALDSREEMVSG 483 W +T D + Q + Q + A+ + L EE+ Sbjct: 731 FWQSTRFSFSCSLGIRLIDETAGSPQQVHAQADTACYAAKDEGRNRLHLYHPDDEELKRR 790 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQ---PIRNKEGEGYDEILARLK-YDGGIMTPDKFL 539 + ++ +N I AL + L+AQ P+ + + + EIL R++ DG +++P F+ Sbjct: 791 EL--EMEYVNHIHKALAEQRFELHAQQIAPVASGSTKQHYEILVRMRNSDGSMVSPGLFM 848 Query: 540 PLIAQFNLSARFDLQVLESLLKWL-ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P ++N++ D V++ +++WL A +K S+NL ++ ++ G +I + Sbjct: 849 PAAERYNIAHLIDRYVVKGVIEWLQANKEAVEKLELCSINLSGQSMGNRDFVGFLIEQIR 908 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + P + LEITE A N ++ QL G IA+DDFG+G +++ LKR+ D Sbjct: 909 DSGLPPSKLCLEITETAAIGNMSEAIQLFTQLKNLGCLIALDDFGSGLSSFGYLKRMPVD 968 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 IIKIDG+FV+DI + +D +V++I +LAK VAEFVE + L LGV Y QG Sbjct: 969 IIKIDGMFVRDIAEDEMDFAMVKAINELAKKMGKRTVAEFVENEAILMRLQSLGVDYAQG 1028 Query: 719 YLIGRPQPLAD 729 YL G+P+PLA+ Sbjct: 1029 YLFGKPKPLAE 1039 >UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW24_9GAMM Length = 796 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 122/427 (28%), Positives = 200/427 (46%), Gaps = 28/427 (6%) Query: 325 QALTDPLTLLPN-------FRAL-EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT L N R L E+A ++G + L +D + ++ G + + Sbjct: 370 QASHDALTGLVNRGEFERRLRQLVERAHVDDSGHALLYLDLDQFKIINDTCGHVAGDELL 429 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSG---PETEGRLQHMVNILNSRQIHWNNTGL 433 R + L +++ + L +L G E +++ + E Q M +++ S Q W + Sbjct: 430 RQLAGLLKHKVRKGDTLARLGGDEFGVLVENCTMEDAERLAQTMCDVVASFQFFWGVSSF 489 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS----REEMVS-GQTTKQ 488 +G ++ Q A+ +C L + RE + + Sbjct: 490 RIGVSIGLASIASGSGDYADIMSQ----ADSACYAAKDLGRNRVHIYRENDAELARRFGE 545 Query: 489 VLLLNTIRTALDQGDLLLYAQPI-----RNKEGEGYDEILARLK-YDGGIMTPDKFLPLI 542 + ++ I + L+Q LY QPI +G Y E+L R++ DG I+ P F+ Sbjct: 546 MQWVSKIESTLEQDRFELYFQPIVPIDNTRLDGRHY-EVLVRMRDVDGNIVPPASFMSAA 604 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRYH 601 ++NL R D +V+ L+WL+ HP K SVNL TL+ + I K+++ Sbjct: 605 ERYNLMGRIDRKVVSQTLRWLSLHPDHLKNLSVCSVNLSGQTLMDDDFLEFIFDELKQWN 664 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + E+TE A N + I L G + ++DDFG+G +++ LK L D IK Sbjct: 665 VDPRKLCFEVTETAAIENLTKASDFIRSLKDRGCKFSLDDFGSGLSSFAYLKNLPVDYIK 724 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 IDG+FV+DIV + +D +VRSI ++A+ VAEFVE + L +GV Y QGY I Sbjct: 725 IDGLFVRDIVKDPIDYSMVRSINEIAQVMGKKTVAEFVEDELILNALRNIGVDYAQGYYI 784 Query: 722 GRPQPLA 728 R QP++ Sbjct: 785 SRDQPIS 791 >UniRef50_A8GZL9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GZL9_SHEPA Length = 857 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 116/424 (27%), Positives = 201/424 (47%), Gaps = 15/424 (3%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQA----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 L R+ Q+ DP+T L N E+ + + L ++ + ++ G + Sbjct: 421 LKRQLQRQSYLDPVTGLLNRTTFEERFMGYAQSSQSLAVVYLDLEQFKLINDSSGHAIGN 480 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVL---SGPETEGRLQHMVNILNSRQIHWNN 430 ++ + R + + +N L ++ G E L++ S ++ ++ + + + N+ Sbjct: 481 KMLKKVARVIESCLSDNMLLGRIGGDEFGLIVRDSSALAVAKLIKKIIAGVGCQTVTHND 540 Query: 431 TGLDMGY--GAAWGRFDGNQETLQPLL-GQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 T +G G A R + + + L L ++ LA + + V D R+ +S Q Sbjct: 541 TCYRVGVSVGVALSRVNKDTDLLGLLKDADIACLAAKRKGCNQVHFYDGRDIDLSYQRNA 600 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD---EILARLKYDGG-IMTPDKFLPLIA 543 + ++ A++ +L+LY Q I+ + EIL R++ GG I+ P +F+ Sbjct: 601 PKWAVRIVQ-AIEHNELILYYQKIKCLSSHSHRQRLEILLRIQEPGGRILPPAQFIAAAE 659 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 F L D +V+ WL+ + S+NL +L + + I+ KR+ + Sbjct: 660 SFKLIVDVDKEVIRKTFLWLSLNEGLWDDHCLSINLSGSSLGAEGMVDFILSQQKRFGVP 719 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + EITE A N +M + L K GF A+DDFG+G+A+Y LK + D +KID Sbjct: 720 SSCICFEITETSAIQNRSRAMKMLLDLRKRGFAFALDDFGSGFASYGYLKEMPVDYVKID 779 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 G FVK++ +N D IV+S+ D+ + + VAEFVE Q+ L +G+ Y QGY IGR Sbjct: 780 GCFVKNLASNAKDYAIVKSVNDVCRVMGIETVAEFVENQEIIDKLEVIGINYAQGYGIGR 839 Query: 724 PQPL 727 PQPL Sbjct: 840 PQPL 843 >UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D3_9GAMM Length = 805 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 115/422 (27%), Positives = 199/422 (47%), Gaps = 22/422 (5%) Query: 325 QALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT L N E+ A + ++ + C + +D + ++ G + + Sbjct: 364 QATHDNLTGLINRTEFERRLIELVQDARQHDSVHALCFIDLDQFKVINDTCGHIAGDELL 423 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVL---SGPETEGRLQHMVNILNSRQIHWNNTGL 433 R + + L+ +++++ L +L G E +++ ++E + ++ Q W++ Sbjct: 424 RQLGQRLIGQVRKSDTLARLGGDEFAILMRHCDPGQSEKVATEVREVIELFQFVWDSRVF 483 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLS---WLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 +G + + +L Q + A+ + + + D + +V Q + Sbjct: 484 TIGASIGVSSIHRHTTDMTEVLKQADTACYAAKNAGRNRVYIYQDDDKHLVEQQG--EFH 541 Query: 491 LLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTP-DKFLPLIAQFN 546 +N I+ AL + L+ QPI ++ + E Y E+L RL+ G ++P FLP ++N Sbjct: 542 WVNEIKLALTENRFELFVQPITSAKSGKAEIY-EVLLRLRNKQGDLSPPSAFLPSAERYN 600 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 LS + D VLE WL H R ++NL +L + I LF++ S Sbjct: 601 LSDKVDRWVLEKTFDWLEKHINQVPDLRKIAINLSGASLGNDEMLKLISDLFEKARFSAS 660 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + EITE A SN + I +L K G ++DDFG+G +++ LK L IKIDG+ Sbjct: 661 KIKFEITETAAISNLREATRFISELSKLGCEFSLDDFGSGLSSFGYLKHLPVKSIKIDGM 720 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FVKD+ + LD +V+SI D+ L +AEFVE + L +G+ Y QGY +GRP Sbjct: 721 FVKDMAHDPLDFEMVKSINDIGHVMGLKTIAEFVENEDVWQKLQSIGIDYGQGYHLGRPV 780 Query: 726 PL 727 P+ Sbjct: 781 PI 782 >UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C6M6_ACAM1 Length = 935 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 116/428 (27%), Positives = 211/428 (49%), Gaps = 19/428 (4%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQA-----PEQEAG---KSFCCLRIDNLEFMSRHYGL 369 L+++ QA D LT L N R E E+++ + C L +D + ++ G Sbjct: 506 LSQQLTHQATHDSLTGLVNRREFEHQLGQIIEEKQSNPIQHALCFLDLDQFKIVNDTVGH 565 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-GRL--QHMVNILNSRQI 426 + ++ + L +++ + L +L G E L+L E R+ +++++ L+ + Sbjct: 566 LAGDALLKQVADLLQAHIRQTDILSRLGGDEFGLLLKNCSLEKARIVTENLISELSQFRF 625 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ--LSWLAEQSCAHHHVLALDSREEMVSGQ 484 W +G + + L L + ++ + + + V ++ + V+ Q Sbjct: 626 IWEGQLFKIGASIGIVPITADTDNLTLLFAKADVACYSAKDRGRNRVHLYHAQAQGVTEQ 685 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY----DEILARLK-YDGGIMTPDKFL 539 + +++ + TIR AL++ LY QPI + E EIL RL+ DG I++P+ FL Sbjct: 686 HS-ELMQVATIRKALEESRFRLYYQPIVPLDTETKIPVCYEILLRLQDTDGKILSPNSFL 744 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 P ++ L D V+E++L + ++ R S+NL +L + I + Sbjct: 745 PAAERYGLMLEIDKWVIENVLIKYGAYFQSQENTRISINLSGSSLDDDALLDFIQTQLNK 804 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P + EITE A SN + ++ IE++ +FG A+DDFG+G++++ LKR D Sbjct: 805 TQLEPHKICFEITETVAISNFKQAIQCIEKIKEFGCHFALDDFGSGFSSFSYLKRFPIDY 864 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KIDG V+D+V + ++V +I + +A + +AEFVE L ++GV YLQGY Sbjct: 865 LKIDGSLVRDMVEDATHQVMVSAINQICRAMHIKTIAEFVENGDTIVALEQIGVDYLQGY 924 Query: 720 LIGRPQPL 727 +G+PQPL Sbjct: 925 AMGKPQPL 932 >UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=Bacteria RepID=B4SHZ4_STRM5 Length = 710 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 124/426 (29%), Positives = 207/426 (48%), Gaps = 41/426 (9%) Query: 326 ALTDPLTLLPNFRALEQ------APEQEAGKSFCCL--RIDNLEFMSRHYGLMMRVHCIR 377 AL DPLT LPN L++ A ++ G F + +D + ++ YG + Sbjct: 269 ALHDPLTRLPNRLLLQRRIVQALAEAEQGGSRFAVMFMDLDGFKQVNDAYGHQAGDALLV 328 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI--LNSRQIHWNNTGL-- 433 ++ L++ N+ L +L G E +LV+ R++H ++ L R + +G Sbjct: 329 AVAERTRQLLRPNDMLARLGGDEFVLVV-------RIEHDEDLPTLARRILQAVGSGPLL 381 Query: 434 ---DMGYGAAWG-----RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 ++ A+ G ++ L + A++S + VL D ++ Sbjct: 382 ADNELQVTASIGVAICPDHAASERQLMAFADAAMYQAKESGRNAFVLFAD----WMNDSA 437 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +Q LL +R A+ L L QP + ++ G + ++ + G++ PD+F+ L Sbjct: 438 EQQFRLLADLRRAIGSEQLFLNYQPKIRVATQKVAGAEALIRWRHPEHGLIPPDRFIRLA 497 Query: 543 AQ---FNLSARFDL-QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + N R+ L Q L +W H +G SVNL P+ ++ + + + Sbjct: 498 ERSGAINDIGRWALDQACLQLRRW---HDAGHEGWSMSVNLSPVQFSSPHLLQDVREVIE 554 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 RY+I+P+ ++LEITE + ++S+ ++ L G I+IDDFGTGY++ LKRL A Sbjct: 555 RYNIAPRHLVLEITESTVMRDTDTSLRLLQALSALGVGISIDDFGTGYSSLLYLKRLPAT 614 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 IKID FV+D+ + D +IV +I L A + +VAE VET Q+A L +LG YLQG Sbjct: 615 EIKIDHAFVRDLEHSAEDVVIVSAIVALGHALDMDIVAEGVETAAQRAYLERLGCDYLQG 674 Query: 719 YLIGRP 724 YL+GRP Sbjct: 675 YLLGRP 680 >UniRef50_A6FHQ7 PAS sensor diguanylate cyclase and phophodiesterase (Fragment) n=2 Tax=cellular organisms RepID=A6FHQ7_9GAMM Length = 950 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 117/426 (27%), Positives = 208/426 (48%), Gaps = 26/426 (6%) Query: 326 ALTDPLTLLPNFRALEQ--APEQEAGKS------FCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT L N E+ EA +S L +D + ++ G + ++ Sbjct: 519 AKYDQLTGLVNRSHFEKLVGASLEANRSVLEDNILLYLDLDQFKLVNDICGHDVGDSLLK 578 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI-LNSRQIHWNNTGLDMG 436 I L + E+ L +L G E ++L+ + L+ I + + G Sbjct: 579 KITVVLKSFLDESAILARLGGDEFGILLNHTNFDNALEVADTIRCGIEDFRFTHNGRHFV 638 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSC------AHHHVLALDSREEMVSGQTTKQVL 490 G + G + E+++ LS LA+ +C + V +++ G +++ Sbjct: 639 LGVSIGVVTLD-ESIENFSQALS-LADTACFTAKEQGRNRVHVYSKCNDVMLGHQ-REMR 695 Query: 491 LLNTIRTALDQGDLLLYAQPIRN-----KEGEGYDEILARLK-YDGGIMTPDKFLPLIAQ 544 + +R ALD+ L Q I+ KEG Y EIL RL+ DG + +P +F+ Sbjct: 696 WIGVLREALDENRFELAFQTIKPLSASIKEGYRY-EILLRLRDEDGNLQSPSEFIAAAEN 754 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 +N ++ D V+++ +WL+++P S+NL +L+ +++ I Y I Sbjct: 755 YNFMSQLDRWVVKTYCQWLSSNPKHLANLSSASINLCGQSLVDRSMHSYIENTILTYGIP 814 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + EITE QA + + ++ + + G R ++DDFG+G+++Y +KRL D +KID Sbjct: 815 PEKLCFEITESQAIMDFDQTILFMNKFKALGCRFSLDDFGSGFSSYSYIKRLPIDQLKID 874 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 G FVK+I T+ +D +V+S ++AKA ++ VAE+VE + + +L +G+ Y+QGYLI + Sbjct: 875 GSFVKNIETDNVDYTMVKSFNEIAKAVNIKTVAEYVENENIKNILSGIGIDYVQGYLIAK 934 Query: 724 PQPLAD 729 P L D Sbjct: 935 PALLVD 940 >UniRef50_A6AP12 FOG: EAL domain protein n=2 Tax=Vibrio harveyi RepID=A6AP12_VIBHA Length = 661 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 134/499 (26%), Positives = 239/499 (47%), Gaps = 29/499 (5%) Query: 246 VFFIIFTLGVGK--LRYPFL--NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 + + +G+GK L P L T + ++N L E Y++ +L VL Sbjct: 168 ILLCLVGMGLGKFGLIRPMLVGAATLLICVFSIINRFNAELLSREQVYAMLLVLFVL--- 224 Query: 302 SVCLLYMVRIYHRSEWLNRRWHL-QALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 L +M+ + ++ R + + D T L N L++ ++A + + ID Sbjct: 225 -TMLTFMLGAHTIKNYVTTRNAIRKERIDSFTGLYNLAQLKEDVAKQANAT--VIYIDLE 281 Query: 361 EFMSRHYGL--MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG--PETEGRLQH 416 +S+ GL R ++ + + L + ++ Y P + LL ++ P+ + L+ Sbjct: 282 PTLSKLNGLGHQGRAQLMKQLSQYLASNTEHLKRAYLPPFASGLLCIAPRLPDMDAELET 341 Query: 417 MVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 ++ +L+ ++++ + + ++L PL+ S L EQ H + + Sbjct: 342 LIALLDRFYFYFDDKAISLVKRTIQCASVYGDKSLDPLI---SKLCEQQGHEHRCVNWIT 398 Query: 477 REEMVSGQTTKQVL-LLNTIRTALDQGDLLLYAQPIR--NKEGEGYD-EILARLK-YDGG 531 ++ Q K L L+ I+ + + LY QP R ++ + + EIL RL+ Sbjct: 399 QD-----QEQKNTLDQLSFIQQCFRKNEFELYCQPYRALSEANQAANFEILLRLRPSKDT 453 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIA 590 +M+P +F PLI +F L D V+E L D + R S+NL L + +A Sbjct: 454 LMSPGEFFPLINEFGLELELDNWVIEHTFLSLKAQIHDWRSVGRCSINLTAKALNSEGLA 513 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 +I + I + EITE A N ++ N+ L K G IA+DDFGTGYA+++ Sbjct: 514 EQIQTKAALHEIPMNKLCFEITESDALCNEPIAIQNLNLLRKAGSTIALDDFGTGYASFD 573 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+RL D++K+DG FVKDIV + D +IV++I+ +A++ +L VAEFVE++ L Sbjct: 574 YLRRLPLDVLKVDGSFVKDIVASENDRIIVQAISQVARSMNLVTVAEFVESEAHIETLRA 633 Query: 711 LGVQYLQGYLIGRPQPLAD 729 L +Q+ QG+ + +P PL++ Sbjct: 634 LNIQFAQGFGVSKPIPLSE 652 >UniRef50_A1SX34 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SX34_PSYIN Length = 799 Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 106/389 (27%), Positives = 191/389 (49%), Gaps = 16/389 (4%) Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 CC+ +D + ++ G ++ I L ++ + + ++ G E ++ + + Sbjct: 395 LCCIDLDQFKLINDSCGHFAGDTLLKEISVVLTQTVRAKDLVARIGGDEFAILFQSSDLQ 454 Query: 412 GRLQHMVNILNS-RQIHWNN------TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 Q ++ + QI +++ G +G GR+D + Q G+++ A + Sbjct: 455 AAKQIAQDVCDKIAQIRFHHKDKFYHVGASIGVVPLDGRWDNAEAAQQA--GEIACFAAK 512 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI----RNKEGEGYD 520 V ++ V Q Q+ + ++ A+D+ L+AQPI E + Sbjct: 513 HEGRGRVHMYTDLDKTVMEQR-DQMQWASRLQQAIDENRFELFAQPIMALDEQAEQGLHF 571 Query: 521 EILARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVN 578 E+L RL+ GG +++P F+ QF L+ + D V+ ++LKW+ TH + +K +VN Sbjct: 572 EVLLRLRETGGALVSPAVFMASAEQFGLATQIDHWVVNNVLKWMKTHADELEKVHIIAVN 631 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L ++ ++ +I + Q + EITE A N + + I +H+ G +I+ Sbjct: 632 LSGNSVGDRDFHQFLIEALDHAQVPVQKISFEITETAAIENLDIATEFIAMVHQRGAKIS 691 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFG+G ++ LK+L D +KIDG FVKD+ +T+D +VRSI +A +AEF Sbjct: 692 LDDFGSGMSSMAYLKKLPVDYLKIDGQFVKDMENDTVDCAMVRSIKQIADLTGKITIAEF 751 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VE + LL +GV + QGY IG+PQP+ Sbjct: 752 VENAKILMLLKDIGVDFAQGYHIGKPQPI 780 >UniRef50_A0Y401 PAS sensor diguanylate cyclase/phophodiesterase n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y401_9GAMM Length = 739 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/426 (26%), Positives = 203/426 (47%), Gaps = 26/426 (6%) Query: 325 QALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 Q+ D LT L N R ++ A E+ + C + +D + ++ G + + Sbjct: 316 QSSHDSLTGLANRREFKRRVELLLSVAAEKRVDHALCYMDLDQFKVVNDTCGHLAGDELL 375 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIH-----WNNT 431 R + L ++++ + + +L G E +++ + H V L ++I W Sbjct: 376 RQLGSLLQKVVRKTDVVARLGGDEFAVLMENCSFDN--AHRVTSLIQKEIEDYRFVWEGR 433 Query: 432 ----GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 G+ MG ++ E L+ L ++A++ + + D EE+ Q Sbjct: 434 SFRIGVSMGLIQITDKYVDFTEVLK-LADVACYIAKEKGRNRIHVHYDDDEELAVHQGEM 492 Query: 488 QVLLLNTIRTALDQGDLLLYAQ---PIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 Q +N ++ A+D+ +YAQ P+ + + Y+ +L + GGI+ P FLP + Sbjct: 493 Q--WVNRVQDAIDENRFKIYAQLIEPLACDKNKHYELLLRMVDDQGGIIPPGAFLPPAER 550 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 + L + D ++E+ K + +P KG F S+NL +L ++ + Sbjct: 551 YQLIVKVDSWMIENAFKMILNNPNFLKGVNFLSINLSGQSLTNEDFLIFVTEQLTLLGEH 610 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 + + EITE A SN E + I QL G A+DDFG+G +++ LK L+ D +KID Sbjct: 611 SEKICFEITETAAISNLELASKFISQLKVLGCCFALDDFGSGLSSFGYLKNLKVDYLKID 670 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 G+FVKDI + +D +V+SI ++ + +AEFVET + + L ++GV Y QGY + + Sbjct: 671 GIFVKDIEVDPIDHAMVKSINEIGHVMGMKTIAEFVETSRIKQTLLEMGVDYAQGYAVHK 730 Query: 724 PQPLAD 729 PQP+ + Sbjct: 731 PQPIEE 736 >UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Methylobacterium RepID=B1ZFY0_METPB Length = 833 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 144/519 (27%), Positives = 224/519 (43%), Gaps = 56/519 (10%) Query: 261 PFLNLTWAVSTLCLLNYNQ---NFLQGVETEYSLAFILAVLISFSV-CLLYMVR------ 310 P L+L LL ++ L+ E E A LAV + S + Y+ R Sbjct: 294 PLLDLFADADAPALLRRSRCRPEELRPEEFEIRTAAGLAVPVELSCRAIEYLGRPATAVA 353 Query: 311 ---IYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDN 359 + R R HL AL D LT LPN ALE A E A + L +D Sbjct: 354 LRDLSQRRRDEARIRHL-ALHDALTDLPNRTLLEERLSLALETAAENGASVALVYLDLDR 412 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ +G + + +L ++ + L ++ G E ++VL+ T ++ Sbjct: 413 FKPVNDFHGHAAGDALLVQAAKRMLAELRPTDTLARIGGDEFVIVLAHTRTLAQIAETAA 472 Query: 420 ILNS---RQIH--WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA----EQSCAHHH 470 L + R H N G G G +G E L+ +G + +A + S A Sbjct: 473 RLVAALGRPFHLEGQNEGEGKSEGKGEGTSEGKSEGLRIEIGASAGIAVYPSDGSTAETL 532 Query: 471 VLALDSR---------------EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---R 512 A D+ E + Q + + + + A+ +G+L LY QPI R Sbjct: 533 KRAADTALYRVKDEGRGTVRFFEAAMDEQLQARRRIEHELSGAIPRGELQLYYQPIVNGR 592 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT--HPCDK 570 E E ++ ++ + G + P F+PL Q + R VL++ A HP Sbjct: 593 TGEIETFEALIRWHHPERGCVPPADFIPLAEQTDQIGRIGAWVLDTACAAAAAWPHPW-- 650 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R SVN+ P Q A + + RY + P ++LEITE +A ++ + L Sbjct: 651 ---RVSVNVSPKQFRQPGFAAGVAAVLGRYGLPPGRLVLEITEGVFIQDATMAVEVLTAL 707 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G R+A+DDFGTGY++ L+R + D IK+D FV+ + + IVR+IT L Sbjct: 708 RTLGVRLALDDFGTGYSSLSYLQRFKFDKIKVDQSFVRRLGRHADTLTIVRAITHLGHNL 767 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V E VETQ+Q A+L +LG +QGYL RP P+ + Sbjct: 768 GLQVTVEGVETQEQLAMLRELGCDQMQGYLFARPAPMTE 806 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 125/430 (29%), Positives = 213/430 (49%), Gaps = 33/430 (7%) Query: 326 ALTDPLTLLPNFRALEQAPEQEAG-----KSFCCL---RIDNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN R L+ +QE K C L +D+ + ++ G +R Sbjct: 386 AFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFIDLDDFKTLNDTLGHDTGDKLLR 445 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVL---------SGPETEGRLQHMVNILNSRQIHW 428 + L ++E + + ++ G E +L+L + E Q ++ +LN + Sbjct: 446 QVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAATHAELVAQKVLRVLNKPYL-L 504 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLL--GQLSWLAEQSCAHHHVLALDSR-EEMVSGQT 485 ++T F G+QETL+ LL L+ ++ + V D+ +E+V+ ++ Sbjct: 505 DSTPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRNTVRFYDTTMQEVVNAKS 564 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD-EILARLKY-DGGIMTPDKFLPLIA 543 + ++R A+ +L+ QP N G+ E L R ++ G++ P+KF+PL Sbjct: 565 VMEA----SMRQAITGQQFVLFYQPQINSNGQIIGAEALVRWRHPQKGLIAPNKFIPLAE 620 Query: 544 Q--FNLS-ARFDLQVL-ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + F LS R+ LQ E L++W A P + +VN+ Q ++ + R+ + Sbjct: 621 ENGFILSIGRWVLQTACEQLVEW-ARQPATAQ-ITMAVNVSARQFHQIDLVEEVERIICQ 678 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 +PQ + LE+TE + E + ++ L K G ++DDFGTGY++ LKRL D Sbjct: 679 TGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSSLAYLKRLPLDQ 738 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DI+ ++ DA I R++ LAK+ +V+AE VE +Q +L +G + QGY Sbjct: 739 LKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGY 798 Query: 720 LIGRPQPLAD 729 L GRP P+ + Sbjct: 799 LFGRPVPIEE 808 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 121/432 (28%), Positives = 199/432 (46%), Gaps = 35/432 (8%) Query: 319 NRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLM 370 NR AL D LT LPN +A++QA + + + +D + ++ YG Sbjct: 256 NRELIQLALHDNLTKLPNRMLLDDRLEQAIQQAIRDDRRFAVLFMDLDGFKAVNDAYGHH 315 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG--PETEGRLQHMV--NILNSRQI 426 + + + + ++ + + +L G E +L++ P L + I QI Sbjct: 316 LGDLLLIEVAERIRANVRAQDTIARLGGDEFVLLIEAREPADAATLAEKLVKRISQPYQI 375 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR-----EEMV 481 + + G A + G+ +T L+ A +H E + Sbjct: 376 SRHEVRISASIGIAL--YPGDGQTRHELM------INADAAMYHAKDQGRNGYCFFESSM 427 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKF 538 + +Q+ LL+ +R AL++ L+L+ QP N G + +L G++TP +F Sbjct: 428 NANAQEQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMIGVEALLRWEHPQHGLITPGQF 487 Query: 539 LPLIAQFNLSARFDLQVLESLLK----WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 LPL + L + VL+ + WL D +VNL L + + Sbjct: 488 LPLAEKTGLIVQIGEWVLDEACRQMRLWLDGGHADWN---IAVNLSALQFAHAGLVDSVR 544 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 R+ + P +ILE+TE A +A++S+ +EQL G I+IDDFGTGY++ LKR Sbjct: 545 NALLRHSLEPSHLILEVTESTAMRDADASLVILEQLSAMGVGISIDDFGTGYSSLLYLKR 604 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L A +KID F+ ++ ++ DA IV +I L + +L +VAE VET+ QQ L +LG Sbjct: 605 LPASELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVETEAQQEFLTRLGCN 664 Query: 715 YLQGYLIGRPQP 726 LQG+L+GRP P Sbjct: 665 SLQGFLLGRPMP 676 >UniRef50_Q8D5T3 FOG: EAL domain protein n=2 Tax=Vibrio vulnificus RepID=Q8D5T3_VIBVU Length = 725 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 108/350 (30%), Positives = 171/350 (48%), Gaps = 20/350 (5%) Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQ----HMVNILNSRQIHWNNTGLDMGYGAAWGRF 444 EN K Y+ P S VL E + R++ M L++ Q +W T + + Sbjct: 374 ENAKCYRPPFSTG--VLGFIEGDERMKPFVAEMAQRLDNFQFYWRGTSISLVSPTLHCVV 431 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + E L ++ S L E ++ V +D E + Q K L I+ + Sbjct: 432 VKHGEDLTDVV---SHLCEHQGSNQQVNWIDG-EAIAESQIDK----LAYIQRVFKNNEF 483 Query: 505 LLYAQ---PIRNKEGEGYD-EILARLKYD-GGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 LY Q + + + E+L R+K + P +F PLI QF L + D V+E Sbjct: 484 ELYCQRYMKLADPSSQQLSFEVLTRVKTSQDSRLLPSEFFPLINQFGLEVQLDQWVVEQT 543 Query: 560 LKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + L + + + +VNL +L ++ II +Y + + E+TE A Sbjct: 544 FRLLNEQVRNWCRVEKCAVNLTARSLAMAGLSTWIIEKAHQYQVPLDKICFEVTESSALQ 603 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N E ++ ++ L G +IA+DDFGTGYA++ L+RL DI+KIDG F+KD+ TN D + Sbjct: 604 NEEQAIETLKVLRAAGCKIALDDFGTGYASFAYLRRLPLDIVKIDGEFIKDLPTNETDRL 663 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV SI+++A L VAEFVE++Q +L + + Y QG+ + +PQPLA Sbjct: 664 IVESISNVANDIGLETVAEFVESEQHIEMLKQWHITYAQGFGVYKPQPLA 713 >UniRef50_B2HTC9 EAL domain protein n=14 Tax=Acinetobacter RepID=B2HTC9_ACIBC Length = 684 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 138/507 (27%), Positives = 233/507 (45%), Gaps = 45/507 (8%) Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI------- 299 F ++ TL + + Y T +ST N F+ + E+ L +L+ Sbjct: 179 FAVMMTLSIMVMHY-----TALIST----NITDKFVSQYQAEHDLLLFTIILVTCLVLVA 229 Query: 300 SFSVCLLYMVRIYHRSEWL---NRRWHLQALTDPLTLLPNFRALEQAPE--------QEA 348 SF V +L R+ R+ L N+ ++ D LT LPN L E ++ Sbjct: 230 SFIVAVLEQ-RLNQRNLELRKANKELANLSIQDNLTKLPNRLYLVDYAEVLLSDHRYKDQ 288 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 +F + +D + ++ +G + + + L + E KL ++ G E LL+ Sbjct: 289 KIAFLYIDLDRFKSVNDAFGHHIGDQLLIQMANRLHWQLNEKCKLLRIGGDEFLLIAENT 348 Query: 409 ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWG--RFDGNQETLQPLL----GQLSWLA 462 +TE +Q +L+ Q + +G ++ A+ G F + + +Q LL + Sbjct: 349 DTEEAMQLAEKVLHLIQDSYQISGKEINISASLGIALFPEHGQNVQDLLMNADAAMLMSK 408 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYD 520 EQ + V + + ++ +T Q L+N + A+++ +LY QP N E G + Sbjct: 409 EQGRNTYTVFSYSTHQQ----ETRSQSKLINDLYKAVEEKQFVLYYQPKFNTNLEICGVE 464 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF---SV 577 ++ G++TP F+ + L LE + + ++ +F +V Sbjct: 465 ALIRWNHPSLGMLTPHMFIGGAEKTGLIIPMGYWALEQACQQI--QEWERSNTQFYPIAV 522 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 NL L K + + L K+Y I P +I+EITE A + + S+ E+L G R+ Sbjct: 523 NLSALQFENKKLFSTLEGLLKKYQIQPHHLIIEITESTAMRHIDLSIRACERLRDMGIRV 582 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTG++++ LK L D +KID F+ D+ + + +I+ SI LAK L+V AE Sbjct: 583 AIDDFGTGHSSFLYLKDLPVDELKIDRGFIVDLKPGSKEEVILESIIHLAKKLGLTVTAE 642 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRP 724 VETQQQ +L +LG Q QGYL+G P Sbjct: 643 GVETQQQVEILTRLGCQQFQGYLLGMP 669 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 115/413 (27%), Positives = 195/413 (47%), Gaps = 16/413 (3%) Query: 326 ALTDPLTLLPNFRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRV--HCIR 377 A DPLT LPN L E G L ID F + + L V + Sbjct: 533 AYFDPLTGLPNRTLLRDRIESAIHFANRNGSKVAILFIDLDYFKTVNDTLGHDVGDRILV 592 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGRLQHMVNILNSRQIHWNNTGLDMG 436 + + L + +E + + + G E + V+ + + +Q IL+ + G D+ Sbjct: 593 QVAKRLSSVFRETDTVARFGGDEFVAVIPDVRDLKDVVQVAERILSLFSTPFEANGEDIY 652 Query: 437 YGAAWG--RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 A+ G + N E L+ +A E ++ + + + + N Sbjct: 653 LSASVGIAVYPDNGENPTELIKNAD-MAMYRAKEEGKSNFSFFTEEMNSKAVEILSVKNK 711 Query: 495 IRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 + AL++G+ LLY QPI + G + +L D G+++P KF+P++ + L Sbjct: 712 LHKALERGEFLLYYQPIYSLGDNSIVGLEALLRWRDPDRGLVSPAKFMPILEELGLVKEV 771 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ K + D+ G SVN+ P + +N R++++ + + + V+LEI Sbjct: 772 GRWVMGEAFKK-SREWGDRYGIYVSVNISPRQFMDRNFVKRVLQIASDTNANNEHVVLEI 830 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N E S+ +++L GF++A+DDFGTGY++ LKRL DIIK+D F + +V Sbjct: 831 TETSLMRNPEESVSILKRLRAKGFKVAVDDFGTGYSSLAYLKRLPIDIIKVDMTFTQGMV 890 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 + +D IV ++ L+K+ L +AE VET++Q +L +LG QGYL G+P Sbjct: 891 KSNVDRSIVMAVIGLSKSLGLKSLAEGVETREQVNILRELGCDLAQGYLFGKP 943 >UniRef50_B4SPP4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=30 Tax=cellular organisms RepID=B4SPP4_STRM5 Length = 807 Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 124/435 (28%), Positives = 207/435 (47%), Gaps = 34/435 (7%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQ-------EAG-KSFCCLRIDNLEFMSRHYGL 369 L R A DPLT L N R +E+ E+ E G S C + +D+ + ++ +G Sbjct: 359 LAREIEHHASHDPLTGLINRREIERLLERSLLQVRSEGGTHSLCYINLDHFKLVNDSFGH 418 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSE--LLLVLSGPETEGRLQHMVNILNSRQIH 427 +RS L+ +++ + + +L E + L +G + R+ V I N Q Sbjct: 419 AAGDQMLRSFADYLVAAVRDGDWVGRLGADEFAVFLAHAGQDEAKRVLQRV-IRNLGQAT 477 Query: 428 WNNTGLDMGYGAAWGRFDGNQET-----LQPLLGQLSWLAEQS------CAHHHVLALDS 476 + + + G + N E L + A+Q+ C + + LAL+ Sbjct: 478 FPISEGSPQLSCSIGVVEVNAEAPDANWLMSAADSACYAAKQAGRNRVHCFNENRLALEE 537 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY--DEILARLK-YDGGIM 533 R + + L + A+ + +LLYAQ I Y E+L R++ DG + Sbjct: 538 RRQ--------EAERLQGVSLAMAENRMLLYAQRIARVGDPSYLHYEVLVRMRGTDGSLH 589 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGR 592 P +F+P + ++ ++ D VL L + L P + +VN+ ++ + Sbjct: 590 LPGQFMPAVERYGMAVALDRHVLGLLFRHLQVCPAHVRQLGLCNVNVSAQSIAEPGFLAF 649 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + L +R + EITE A SN + I+ + G R+A+DDFG+G +++ L Sbjct: 650 VCDLLERNRALASKLCFEITETAAISNLSQARAFIDAVKARGCRMALDDFGSGLSSFGYL 709 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 ++L ADI+KIDG FV+D+ T+ + VR+I++L + + VVAE+VET + A L +LG Sbjct: 710 RQLPADILKIDGTFVRDMDTDPISHATVRAISELGRELQMEVVAEWVETAEVAAALTRLG 769 Query: 713 VQYLQGYLIGRPQPL 727 VQ LQGY I RPQPL Sbjct: 770 VQGLQGYAIERPQPL 784 >UniRef50_Q7MQD8 Sensory box/GGDEF family protein n=54 Tax=Vibrionales RepID=Q7MQD8_VIBVY Length = 1048 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 116/404 (28%), Positives = 187/404 (46%), Gaps = 15/404 (3%) Query: 338 RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 RAL + + + +D L+ ++ G I+ L ++ L +L Sbjct: 633 RALREVESHRRVHAMLYIDLDQLKVLNDTAGHDAGDGAIQFCASMLEEVLPHTAILARLG 692 Query: 398 GSELLLVLSGPETE---GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++L G + ++ L+S+ W +++ D E+ Q + Sbjct: 693 GDEFAVLLKDSNEHTAIGVAKTIIATLSSQPFIWEKVQINLTCSIGIRMIDHTAESPQMV 752 Query: 455 LGQLS----WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ- 509 Q EQ + +LDS E Q + V N + AL L L+AQ Sbjct: 753 HAQADTACHAAKEQGRNRFKLFSLDSEELQRRQQEMESV---NLVHDALANDRLELFAQR 809 Query: 510 --PIRNKEGEGYDEILARLK-YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P+ + + + EIL R++ G ++P F+P ++N++ D QV+ L WL H Sbjct: 810 IIPLSKECDKMHFEILTRIRDKQGEYLSPAIFMPASERYNIAHLIDEQVVTKTLDWLEAH 869 Query: 567 PCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 P + R S+NL ++ ++ I + LEITE A N +M Sbjct: 870 PDALHQLGRCSINLSGHSMGNPEFMAFLLDRLTNSVIPCHKLCLEITETAAMKNVALAMD 929 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 Q+ G IA+DDFG+G +++ LK+L D++KIDG+FV+D+ N D ++VR+I + Sbjct: 930 FFAQVKALGCLIALDDFGSGLSSFGYLKQLPVDVVKIDGIFVQDMHRNESDHIMVRAINE 989 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA+ VAEFVE + ALL +LGV Y QGY+IG P PLA+ Sbjct: 990 LAQQMGKQTVAEFVENSEIIALLTELGVDYAQGYVIGYPTPLAE 1033 >UniRef50_C7RCU7 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCU7_KANKD Length = 783 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 126/470 (26%), Positives = 210/470 (44%), Gaps = 37/470 (7%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHR----------------SEWLNRRWHL--QALTDP 330 YSL ++ +L F +Y+V + +R SE + R L QA D Sbjct: 316 YSLMLLVMLLTIFLFYFMYLVFVLYRNNKVLLESKGELRKNISELESSRNQLVYQANHDF 375 Query: 331 LTLLPNFRALE----QAPEQEAGKSF--CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LT L N AL+ + Q G C L ID ++ +G ++ + + Sbjct: 376 LTDLENRFALDKFLNELISQGGGAKHIACLLDIDKFNLVNDSFGHEAGNFVLKQFAKIIH 435 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWN--NTGLDMGYGA 439 + + Y+L E L+V E + + NIL + W + +D G Sbjct: 436 TNIGAKDHAYRLSADEFLIVFDQANLESAFKVIHNILMTVHDTVFDWTEMHISIDASAGM 495 Query: 440 AWGRFD--GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 A D G E L L + E+ HV E + Q QVL +N I Sbjct: 496 ATIGSDTLGPSEVLSELASARTIAKEKGGNRIHVFDKSDPESIHFHQ---QVLWVNRINK 552 Query: 498 ALDQGDLLLYAQPIRNKEGEG--YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 ALD+ L Q I++ G+G + ++ L GG++ P +F+P +FN+ + D V Sbjct: 553 ALDEDRFALRTQTIKDLNGDGDLKEVLVVMLDEHGGMIPPIEFIPAAERFNIMPQVDNWV 612 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + +L++L + + +NL ++L + ++ Q ++ EITE Sbjct: 613 VNRVLEYLEAN-SQASDYLWCINLSGVSLNSEEFRESLVEQISENQELAQYMVFEITETA 671 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 A +N E I+ L++FG + A+DDFG+G ++Y L+ + D IK+DG F+K I+ N Sbjct: 672 AINNYELVKEFIDSLNRFGCKFALDDFGSGMSSYGYLRNIPVDFIKVDGSFIKQILENDY 731 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 D IV+SI +++ + +AEFVE +Q + ++G Y QGY I +P+ Sbjct: 732 DQTIVKSICEISVQLGIKTIAEFVENEQVLNKIKEMGFDYGQGYHIDKPK 781 >UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2C3_NITSB Length = 765 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 117/429 (27%), Positives = 205/429 (47%), Gaps = 34/429 (7%) Query: 326 ALTDPLTLLPNFRALEQAPE------QEAGKSFCC--LRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN + + E Q + + F L IDN +F++ YG + + Sbjct: 336 AYNDPLTSLPNRVSFQDILEKLSKIAQRSKERFALIFLDIDNFKFVNDTYGHEIGDKLLI 395 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLD 434 I L ++ ++ ++++ G E ++++ ET+ L ++ + +++ + N Sbjct: 396 DIATILKETLRSSDLIFRIGGDEFVVLIPKVETKDSLDIVLEKIKESVAKEYRYGNINFS 455 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLS---WLAEQSCAHHHVLALDSREEMVS-----GQTT 486 + F + + ++ L + A++S + V +EEM QTT Sbjct: 456 VSCSLGIAIFPDDSDDIETLTRYADIAMYEAKKSGKNRFVFF---KEEMKKYLDHLQQTT 512 Query: 487 KQVLLLNTIRTALDQGD-LLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 + +R AL + D L L+ QP I+N + G + ++ G++TP+ F+P+ Sbjct: 513 QD------LRKALKKEDELTLFFQPKIDIQNNKVIGAEALIRWNHPQKGLLTPNVFIPVA 566 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPR--FSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +L + D V++ + L DK+ S+N+ + + K Y Sbjct: 567 ERSDLIEKIDEFVIKKSFRHLQEWSSDKELQNIVLSLNISARQFRNPKFLDFLDKNLKLY 626 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 +I P + LEITE + N ++ +E + + GF++A+DDFGTGY++ LKRL D I Sbjct: 627 NIDPSKLELEITETLSMENVSHTVNMLEAIKQIGFQVALDDFGTGYSSLNYLKRLPFDTI 686 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+ DI + D I + ITD+A ++AE VET+QQ+ +L L Y QGYL Sbjct: 687 KIDKSFIDDIDKDPEDYQITKIITDIAYTFRKEIIAEGVETKQQERILKDLKCFYAQGYL 746 Query: 721 IGRPQPLAD 729 +P PL + Sbjct: 747 YAKPLPLNE 755 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 87/252 (34%), Positives = 134/252 (53%), Gaps = 3/252 (1%) Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE-GYDEILARLKY-DGGIMTP 535 + ++ + +++ L +R A+++G+L L+ QPI + +G E L R ++ + G++ P Sbjct: 314 DRAMNAASAERLTLEAELRHAVERGELRLFYQPIVDPDGTVRAAEALVRWQHPEQGLLAP 373 Query: 536 DKFLPLIAQFNLSARFDLQVL-ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 D+F+PL + L VL E+ + H + R SVN+ + Q + + Sbjct: 374 DRFIPLADETGLITEIGAWVLTEACYQGRCWHDAGHERFRVSVNVSAVQFGQPRLLETVR 433 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + P + LEITE S+ ES+ + L G RIA+DDFGTGY++ L+R Sbjct: 434 EALRGSGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSSLSYLRR 493 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +KID FV+D+ N DA IVR+I LA + L VAE VET +Q+A L + G Sbjct: 494 LPIDTVKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATLRREGCD 553 Query: 715 YLQGYLIGRPQP 726 QGY GRP P Sbjct: 554 SFQGYRYGRPVP 565 >UniRef50_C6W9U5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Actinomycetales RepID=C6W9U5_ACTMD Length = 673 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 130/426 (30%), Positives = 202/426 (47%), Gaps = 23/426 (5%) Query: 319 NRRWHLQ----ALTDPLTLLPNFRALEQAPEQE----AGKSFCCLRIDNLEFMSRHYGLM 370 +RR H + A DPLT L N RA+ + E+ S L +DN + ++ G Sbjct: 229 SRRVHDELLALAEQDPLTGLANRRAVTRELERRLATGGTGSLLLLDLDNFKDVNDLRGHA 288 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL--SGPETEGRL-QHMVNILNSRQIH 427 + +R++ L ++ + +L G E +VL +GP R+ +H+ + + + Sbjct: 289 VGDRLMRALAAALRTRLEPEHLIGRLGGDEFAVVLPDTGPADAARVAEHLRDTIARLPLA 348 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 T + G A G+ L L+ A ++ + V E T K Sbjct: 349 TPATRTTISTGVAGYGTSGDTWELVLANADLALYASKAAGRNRVTVY---EPGHYADTAK 405 Query: 488 QVLLLNTIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYDG--GIMTPDKFLPLI 542 +V +L+ +R ALD G L L+A P +R G G+ E+L RL+ DG + P FLP Sbjct: 406 RVSVLDRLRGALDGGGLALHAMPMVRLATGRVLGH-ELLLRLE-DGQEPRLGPADFLPEA 463 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + NL D VL + + L HP + RF+VN+ TL G ++ + Sbjct: 464 ERTNLVHEIDRWVLATAIDTLVRHPDPEL--RFNVNVSGRTLEDPEFGGFVLDRLAGAGV 521 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 +P + +EITE A +N +++ QL G RI +DDFG+G+ ++ LK L IKI Sbjct: 522 APGRLGIEITETAAVTNLDAARTLAHQLRGHGCRIVLDDFGSGFGSFVHLKHLPITGIKI 581 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 DG FV+ I DA++V I +A+ LS VAE+VE +Q L LGV+ QG+ +G Sbjct: 582 DGEFVRGIDERGPDAVLVSGIMRIAQGLGLSAVAEWVERPEQVRTLTSLGVRVGQGFHLG 641 Query: 723 RPQPLA 728 P PL Sbjct: 642 GPVPLG 647 >UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nostocaceae RepID=B2J5P2_NOSP7 Length = 1224 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 137/515 (26%), Positives = 231/515 (44%), Gaps = 40/515 (7%) Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 L VF I+ K++ P + L N+ + G + E ++ A + + Sbjct: 719 LEEVFRIVHETTREKVKNPIEQALQENRIVSLANHTV-LITGRDQEIAIQDSAAPIRNRE 777 Query: 303 VCLLYMVRIYH---RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--EAGK------S 351 ++ V ++H ++ L+R+ QA D LT L N + E+ EQ K + Sbjct: 778 GQVIGAVMVFHDVTQNRLLSRQLSWQATHDALTGLVNRQEFERRVEQALHVAKLDYQVYT 837 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 C L +D+ + ++ G + +R I L +++ + L + G E L+L+ E Sbjct: 838 LCYLDLDHFKIVNDTCGHVAGDELLRQITVLLQEKVRKTDTLARFGGDEFGLLLTQCTLE 897 Query: 412 GRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC-- 466 L+ N+L+ Q W +G D N E+L ++ A+ +C Sbjct: 898 EALRVANNLLSCVQEFRFVWQEQVFSIGVSIGLVVIDTNSESLAEIIS----TADAACYT 953 Query: 467 ------AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI-----RNKE 515 +V D +E + Q Q+ + I AL+ LY Q I ++ Sbjct: 954 AKNRGRNRVYVAQTDDQERL---QQRGQMQWVGRISQALESDWFCLYVQRIAAIIPTDQN 1010 Query: 516 GEGYDEILARLKYD-GGIMTPDKFLPLIAQFNLSARFDLQVLESLLK-WLATHPCDKKGP 573 G+ Y E+L RL+ + G ++ P F+P ++NL D V+ +L K W + D K Sbjct: 1011 GDHY-EVLLRLRDEQGKLVLPMAFIPAAERYNLMHLIDRWVIRTLFKNW--SRVVDNKQS 1067 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +++NL ++ + F + ISPQ + EITE A +N + I++L + Sbjct: 1068 IYAINLSGSSINDDRFIDFLHEQFTLHPISPQHICFEITETVAIANLLKARQFIQKLQRM 1127 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R A+DDFG G +++ LK L D +KIDG F+++IV N +D IV +IT ++ + Sbjct: 1128 GCRFALDDFGAGMSSFAYLKSLPIDYLKIDGSFIRNIVENPVDNAIVTAITRISSVMGIQ 1187 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AEFVE + LG+ Y QGY I P PL Sbjct: 1188 TIAEFVENDAILERITALGIDYAQGYGIAVPHPLG 1222 >UniRef50_B9L207 Developmental regulator MorA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L207_THERP Length = 897 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/254 (34%), Positives = 144/254 (56%), Gaps = 9/254 (3%) Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMT 534 E ++ + L+ +++AL G+LLL+AQPI R + Y E+L RL+ ++ Sbjct: 648 EPAIAEPEQPRTAHLSIVQSALANGNLLLFAQPILDLRRERIAAY-ELLIRLREGERVLE 706 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 P F P+ + +FDL VLE + T +G R +N+ TL + + Sbjct: 707 PGMFFPVTEGLGIVPQFDLWVLERACELNLT----SRG-RIHLNVSARTLREARHFAVLR 761 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 L +R +P+ ++LE+TE A + + ++++L + G RIA+DDFG GY++ +L+ Sbjct: 762 DLLERCPFAPRQLVLEVTETTALIDFVQAHEHLQRLRERGCRIALDDFGVGYSSLYQLRH 821 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D IKIDG+F+ D+ N ++ IVR+I LA+A +A +VE+ + ALL +LGV Sbjct: 822 LPIDFIKIDGMFIVDLAENPVNQSIVRAIVALARAVGAETIAGWVESAETLALLRELGVD 881 Query: 715 YLQGYLIGRPQPLA 728 + QG+ IGRP+PLA Sbjct: 882 HAQGFAIGRPEPLA 895 >UniRef50_B0S9W4 Response regulator of a two component complex n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9W4_LEPBA Length = 556 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 120/413 (29%), Positives = 196/413 (47%), Gaps = 43/413 (10%) Query: 332 TLLPNFRALEQAPE----QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 T PNF +L + + +S L+I + + +G+ + R + + L + Sbjct: 155 TKYPNFESLVKELKGNNLSNTNQSILLLKIVTFPTIIKTFGIEVYRKIFRKVLQLLSVHL 214 Query: 388 QENEKLYQLPGSELLLV--LSGPETEGRLQHMVNILNSRQIHWNNTG--LDMGYGAAWGR 443 Q K++ L E+ ++ LS ++ IL S + + G LD Y +A G+ Sbjct: 215 QNEHKVFHLYSDEIAILSNLSEQALVDAVRSFRMILKSDEFFLDGVGFHLDCRYASASGQ 274 Query: 444 FDGN--------QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 D Q Q + +S+ + S HH + + Q +++ I Sbjct: 275 EDCYYKAKLALFQAEFQNTMDFVSYTEDLSTDHH----------LQNFQVSQK------I 318 Query: 496 RTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF- 551 TA+ Q +++ Y Q I + KE + E LAR++ I+TPD FL L A+ S R Sbjct: 319 HTAISQKNIIPYFQGILDNQTKEIRKF-ECLARIRDRDTILTPDVFLKL-AKVTGSIRMI 376 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 LQ+++ +++ + HP D FS+NL L K+ + + +Y I P V EI Sbjct: 377 GLQMIDESMQYFSNHPYD-----FSINLTESELEYKSFSKWVESRLSQYKIDPTRVTFEI 431 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 E+ +FS + S+ I+ L G +IAIDDFG Y+N RL D +KIDG F+K++ Sbjct: 432 LEDISFSEHKHSLSTIKDLKTIGCQIAIDDFGVQYSNLSRLLEFNPDFLKIDGKFIKNLP 491 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 N ++V+ I +LA+ VVAEFV+ Q L+ LG++Y QGYL +P Sbjct: 492 ENKTAYLLVQGIVELARGIGAKVVAEFVDRPAIQDLVESLGIEYSQGYLFMKP 544 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 114/427 (26%), Positives = 199/427 (46%), Gaps = 31/427 (7%) Query: 326 ALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN R A+ A + + +DN + ++ YG M ++ Sbjct: 460 AFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQ 519 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSG---------PETEGRLQHMVNILNSRQIHW 428 + + L+ +++ + + + G E +++L G + E + + L RQ + Sbjct: 520 QVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPLDAASQAETVGEQIFAAL--RQPYL 577 Query: 429 NNTGLDMGYGAAWGR-FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 T G + F+ Q+++ L+ Q +A L + + K Sbjct: 578 IGTHEYHGTSSIGATLFNDKQQSIDELMKQAD-IAMYQAKKEGRNVLRFFDPQMQETIAK 636 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L +R A++ L+ Q I+ E G + ++ + G+++PD+F+PL + Sbjct: 637 RTALEGDLRKAIENHQFQLHYQ-IQVDESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEE 695 Query: 545 FNLSARFDLQVLES----LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 +L VLE+ + +W H G SVN+ Q + ++ L ++Y Sbjct: 696 SDLILPIGYWVLETACARIQRW--QHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQY 753 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 I+P + LE+TE N E ++ + L + G + ++DDFGTGY++ + LKRL D + Sbjct: 754 EINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQL 813 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+DI + D IVR+I +A + L V+AE VET++QQ L G + QGYL Sbjct: 814 KIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYL 873 Query: 721 IGRPQPL 727 G+P P+ Sbjct: 874 FGKPVPI 880 >UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1_9GAMM Length = 864 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 115/427 (26%), Positives = 207/427 (48%), Gaps = 26/427 (6%) Query: 321 RWHLQALTDPLTLLPNFRALE---QAPEQEAGKS---FCCLRIDNLEFMSRHYGLMMRVH 374 R+H A D LT L N R E Q E G C + +D + ++ G + Sbjct: 422 RYH--ATHDALTGLTNRREFENTLQESLDEPGAEHSMLCFIDLDRFKVVNDTAGHVAGDA 479 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ---HMVNILNSRQIHWNNT 431 +R R + ++E + + +L G E L+L + +Q ++ L + W + Sbjct: 480 LLRECARVIGRQVREGDVVARLGGDEFGLLLRHCPAQRAIQIAERLIGALGDIRFAWKES 539 Query: 432 GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC--AHH---HVLALDSREEMVSGQTT 486 D+G A + D N T++ + + A+ +C A H + +++ + ++ + + Sbjct: 540 LYDIGASAGLVQLDANVITVEEAMSR----ADVACYAAKHRGRNRVSVYTPDDSEASRRH 595 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR----NKEGEGYDEILARLK-YDGGIMTPDKFLPL 541 ++ + +R +L+ LLYAQ IR + E Y E+L RL+ +G I+ P F+P Sbjct: 596 LELQMAAGLRESLESNRFLLYAQEIRPIDASTEPSHY-EVLLRLRDRNGDILNPGSFIPA 654 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 ++ + D VL LL L+ ++NL +L + L + Sbjct: 655 AERYQMMPHIDRWVLTQLLVSLSDELAALPQLNIAINLSATSLDDPTFMPFLESLLSKTS 714 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 +SP+ + EITE + S+ + ++ + G ++A+DDFG+G++++ LK D IK Sbjct: 715 LSPERLTFEITETTVVNQLSSASDLLGRIREQGCKVALDDFGSGFSSFSYLKHFPVDFIK 774 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 IDG FV++++ +++D IV SI ++A + VAE+VE +L + GV ++QGY I Sbjct: 775 IDGSFVRNLLHSSVDRTIVESINEVAHRLGVKTVAEYVEEHALIGVLEEAGVDFVQGYAI 834 Query: 722 GRPQPLA 728 GRPQPL+ Sbjct: 835 GRPQPLS 841 >UniRef50_D0I367 Sensory box/GGDEF family protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I367_VIBHO Length = 1043 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 114/369 (30%), Positives = 178/369 (48%), Gaps = 29/369 (7%) Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH---MVNILNSRQIHWNNTGLDM 435 I R LP+ L +L G E ++ + L+ +++ L+ +W NT L + Sbjct: 667 ILRESLPI---GATLARLGGDEFAVICYDCNEQQALEQGKRILDTLSELDFYWKNTRLAL 723 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSC--AHH------HVLALDSREEMVSGQTTK 487 G D T Q + Q A+ +C A H H+ D +E + + Sbjct: 724 GCSVGIRMLDKTASTPQQVHAQ----ADTACYAAKHEGRSRVHLYRPDDQELR---RHER 776 Query: 488 QVLLLNTIRTALDQGDLLLYAQPI----RNKEGEGYDEILARLK-YDGGIMTPDKFLPLI 542 ++ ++ I AL + +YAQPI N E + Y E+L R++ +G + P +F+P Sbjct: 777 EMSFVSKIHEALAEDRFEVYAQPIVSVNANLEEKLYFEVLVRMRDKEGNYVPPGQFIPAA 836 Query: 543 AQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 +FN++ D +V+E L W HP D G S+NL ++ + ++ K Sbjct: 837 ERFNMAHMIDKRVIEKTLGWFDRHPEHVDVVG-MVSINLSGRSMSDEGFIHFLLEALKTS 895 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 I ++ LEITE A SN ++ +L + G IA+DDFG+G +++ LKRL DII Sbjct: 896 TIPSSSISLEITETAAISNLSDAIGLFTKLKQLGCSIALDDFGSGLSSFGYLKRLPVDII 955 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KIDG FV+DI + D ++VR+I +LA VAEFVE L LGV Y QGY Sbjct: 956 KIDGQFVRDIADDEADYVMVRAIHELATQMGKKTVAEFVENDAILMRLCSLGVDYAQGYH 1015 Query: 721 IGRPQPLAD 729 P+P+ + Sbjct: 1016 FSVPKPMEE 1024 >UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8Z9_METSD Length = 828 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 125/432 (28%), Positives = 200/432 (46%), Gaps = 34/432 (7%) Query: 320 RRWHLQALTDPLTLLPN---FRA-----LEQAPEQEAGKSFCCLRID--NLEFMSRHYGL 369 +R A D LT LPN F +EQ P + G FC L ID N + ++ G Sbjct: 399 KRIEQLAYHDILTELPNRLLFNQQLQILIEQTPINKHG--FCLLFIDLDNFKTINDTLGH 456 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---NILNSRQI 426 + + + R + L+ +++ L ++ G E + L P RL + I+++ + Sbjct: 457 SVGDKLLIEVSRRIRQLLGKDDMLARMGGDEFAISL--PHCLSRLDAALLAARIIDALNV 514 Query: 427 HWNNTGLDMGYGAAWGR--FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + A+ G + + L LL LA + ++ Sbjct: 515 PFEVSSIKFFVSASMGIAFYPEDSSHLDDLLKHAD-LAMYHAKRQGRNNFQFYNQELTVN 573 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPL 541 +++L+ N +R AL +G+L LY QPI E G + +L +D G++ PDKF+P+ Sbjct: 574 AAERLLMENLLRQALAKGELQLYYQPIMELATGELHGAEALLRWNSFDLGMVGPDKFIPI 633 Query: 542 IAQFNLSARFDLQVLE----SLLKW--LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 + + VL + + W L + PC ++NL +Q++ RI Sbjct: 634 AEERGMIVDIGAWVLREGCRTAVAWNALRSQPC-----VLAINLSSRQFMQQDFLSRITD 688 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + PQ + EITE +++ +E LH G IAIDDFGTGY+ L + Sbjct: 689 CLQETGCHPQWLKFEITESLLLHDSDHIRQTLEALHSIGITIAIDDFGTGYSALGYLNKF 748 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +KID F+ DI TNT A++V++I +A + +VAE VET +Q LL +LG QY Sbjct: 749 PVSQVKIDRSFISDIATNTESALLVKAIIAMADSLGKELVAEGVETAEQAKLLSQLGCQY 808 Query: 716 LQGYLIGRPQPL 727 +QGY GRP PL Sbjct: 809 VQGYYYGRPVPL 820 >UniRef50_C0N8Q5 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N8Q5_9GAMM Length = 727 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 113/422 (26%), Positives = 200/422 (47%), Gaps = 26/422 (6%) Query: 326 ALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT L N R +L A + + L +D + ++ G ++ Sbjct: 282 AEHDPLTDLCNRRKFIEEFEKSLRTAIRYKHNNALLYLDLDQFKDINDTSGHSAGDELLK 341 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETE--GRL---QHMVNILNSRQIHWNNTG 432 + +TL + + + + +L G E +++ PET+ G + + + L Q+ + N Sbjct: 342 EVAKTLKRVTRFTDLVARLGGDEFAVLM--PETDEVGAVVLTKKIQAELQKIQLEYGNVK 399 Query: 433 LDMGYGAAWGRFDGNQETLQPLLG--QLSWLAEQSCAH--HHVLALDSREEMVSGQTTKQ 488 + + + ++ L+G L+ +S +H+ + D + Q + Sbjct: 400 HKISSSIGIVNYPVHDASIHELMGFSDLAMYKAKSAGKNTYHIFSAD---DQTREQLETR 456 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGG--IMTPDKFLPLIAQ 544 V + I AL+ +L+ QPI N E + E+L R++ G I P KF+ + Q Sbjct: 457 VFWKHKIEDALENNLFVLHYQPILNIENNVIQHYEVLIRMREPGSGQIRMPGKFIEIAEQ 516 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L D V++ +K L+ +F++NL + + + RL K+Y + P Sbjct: 517 VGLIQSIDHFVIQQGIKHLSRLQKQGLKVKFAINLSGSVVDAPVLLPFLKRLLKKYELDP 576 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 +I E+TE A SN + + + + G + ++DDFG G+A++ +++L DIIKIDG Sbjct: 577 SGLIFEVTETAAVSNLQQAKLMMTAVKALGCQFSLDDFGVGFASFNYMRQLPIDIIKIDG 636 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +F+KD+ N D + V+++ D+AK +AEFVE + LL + GV Y QGY IGRP Sbjct: 637 IFIKDLDKNADDQLFVKALIDVAKGLGKKTIAEFVENKDILTLLRQYGVDYAQGYHIGRP 696 Query: 725 QP 726 +P Sbjct: 697 EP 698 >UniRef50_A4ABI7 Sensory box/GGDEF family protein n=3 Tax=unclassified Gammaproteobacteria RepID=A4ABI7_9GAMM Length = 654 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 120/435 (27%), Positives = 200/435 (45%), Gaps = 41/435 (9%) Query: 325 QALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QAL D LT LPN R AL +A + L +D + ++ G + Sbjct: 217 QALFDELTGLPNRRLLQDRLGQALARAKRNNTQAALMFLDLDFFKRVNDSLGHSAGDELL 276 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR------------ 424 I R L ++E + +L G E +L+L+ + EG +H+V+++ R Sbjct: 277 VEIGRRLSDFLREADTAARLGGDEFVLLLT--DIEGGSEHVVSVVRRRGETLRQAVEAPI 334 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM---- 480 I N + + G + D N + L + + + D R + Sbjct: 335 NIKGNEVHITVSIGVSLLPDDTND---------VDDLLKHADTAMYRAKDDGRNTLRFFV 385 Query: 481 --VSGQTTKQVLLLNTIRTALDQGD-LLLYAQP-IRNKEGEGYDEILARLKYDGGIMTPD 536 + ++++ + +R ALD + L LY QP ++E E+L R +Y+G + PD Sbjct: 386 PEMQASLSQRMDMERQLRGALDADEGLELYLQPQYTDEEAICGAELLIRWQYEGSFVPPD 445 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS--VNLMPLTLLQKNIAGRII 594 F+P+ L R V+E+ + A + + FS +N+ P QKN + +I Sbjct: 446 VFIPVAEDSGLIYRLGDWVIENACRIGAGLKDELRDREFSLAINVSPRQFRQKNFSEKIF 505 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +R+ + + LE+TE + + ++ + L + G R +IDDFGTGY++ LK Sbjct: 506 EAMERHELPRGLIELELTEGLLIEDVDDTVSKMLSLREQGVRFSIDDFGTGYSSLRYLKS 565 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +K+D FV+D++T+ DA IVR+I +A+ L V+AE VET++ + L Sbjct: 566 LPLDTLKVDQSFVRDVLTDPGDASIVRAIVSMARTLELEVIAEGVETKEVRDFLISANCL 625 Query: 715 YLQGYLIGRPQPLAD 729 QGYL RP PL D Sbjct: 626 RFQGYLYSRPLPLDD 640 >UniRef50_D0SCY0 Putative uncharacterized protein n=2 Tax=Acinetobacter RepID=D0SCY0_ACIJO Length = 692 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 127/429 (29%), Positives = 203/429 (47%), Gaps = 32/429 (7%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQ------APEQEAGKSFCCLRIDNLEFMS------RH 366 N+ QA+ D LT LPN L + ++ +S L ID F + H Sbjct: 255 NKELANQAVQDNLTKLPNRLYLAEYAHFLFTDQRFRNESIAFLYIDLDRFKAVNDVFGHH 314 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQI 426 G + V I R L +NEK+ ++ G E L+VL E Q ++L Q Sbjct: 315 VGDQLLVQLTTRIHRHL----SKNEKILRIGGDEFLMVLEQATPEQACQMAEHVLELIQD 370 Query: 427 HWNNTGLDMGYGAAWG--RFDGNQETLQPLL--GQLSWLAE--QSCAHHHVLALDSREEM 480 + G ++ A+ G + + LQ LL + L Q + + ++ Sbjct: 371 SFLIAGKEINVSASIGIAMYPEHGSNLQDLLINADAAMLTSKYQGRNTYSIFNYSFDQQE 430 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDG-GIMTPD 536 QT L+N + A+++ +LY QP I+++ G E L R K+ G++TP+ Sbjct: 431 AKSQTK----LINDLYKAVEEQQFVLYYQPKFTIQDQRICGV-EALIRWKHPTLGLLTPN 485 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 F+ + L + LE K L +K + +VNL + K++ + Sbjct: 486 MFIKGAEKTGLIIQMGYWALEQACKQLQIWEREKIELYPIAVNLSAVQFEHKHLFNNLEH 545 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 LF +Y ++P +I+EITE A + E+S+ +++L + G R+AIDDFGTG++++ LK L Sbjct: 546 LFDKYKVNPNHLIIEITESTAMHHIEASIRTLQRLREMGIRLAIDDFGTGHSSFLYLKNL 605 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID F+ ++ + D MI+ SI LA L V AE VE+ Q +L +LG Q Sbjct: 606 PVDELKIDRGFIHELTVGSKDEMILESIVHLAIRLGLVVTAEGVESPLQMEILSRLGCQQ 665 Query: 716 LQGYLIGRP 724 LQGYL+G P Sbjct: 666 LQGYLLGMP 674 >UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMB9_9GAMM Length = 817 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 121/436 (27%), Positives = 205/436 (47%), Gaps = 42/436 (9%) Query: 325 QALTDPLTLLPNFRALEQAPEQ-----EAGKSFCCL---RIDNLEFMSRHYGLMMRVHCI 376 QA D LT L N R E+ ++ E G + L +D + ++ G + Sbjct: 378 QATHDELTGLCNRREFERRLDEALRTLEEGDTPHALFYMDLDQFKIINDTCGHQAGDALL 437 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL----NSRQIHWNNTG 432 R + L +++++ L +L G E L+L E R + + N L + W Sbjct: 438 RELADLLPAHIRDSDTLARLGGDEFGLLLRHCPVE-RAEAIGNKLLATAQGLRFSWEGRR 496 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD-SREEMVSGQTTKQVLL 491 D+G +G + L +L Q A+ +C +A D R + + + + Q+L Sbjct: 497 FDVGMSIGLVPIEGPGQNLPEVLSQ----ADSAC----YVAKDLGRNRLYTWKPSDQILR 548 Query: 492 --------LNTIRTALDQGDLLLYAQPIRNKEGEG----YDEILARLK-YDGGIMTPDKF 538 + +R AL++ + YAQP++ G + EIL RL DG ++TP F Sbjct: 549 RRHGEMEWVGRLRAALEEARFVAYAQPVKPLNGADLPLDHVEILLRLHGEDGTLITPGAF 608 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-----SVNLMPLTLLQKNIAGRI 593 +P +++L D V+E + + LA H + P S+NL +L Q + I Sbjct: 609 IPAAERYHLMPEIDRHVVELVFRQLADH--RDRNPHHAPVVVSINLSGQSLAQDGMLEFI 666 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ I Q +I E+TE A S+ + + I L G R ++DDFG+G +++ LK Sbjct: 667 TSRMSQFRIQAQQIIFEVTETAAISHHDRAQGLIRALRYMGCRFSLDDFGSGLSSFGYLK 726 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L D +K+DG FV+DI TN +DA +V +I + L +AE VE+++ L ++G+ Sbjct: 727 NLPVDFLKVDGSFVRDIATNAVDAAMVTAIHRVGHVLGLRTIAECVESEETMHHLREIGL 786 Query: 714 QYLQGYLIGRPQPLAD 729 ++QGY + +P PL D Sbjct: 787 DFVQGYHLAKPIPLTD 802 >UniRef50_A1TV44 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TV44_ACIAC Length = 772 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 141/503 (28%), Positives = 223/503 (44%), Gaps = 33/503 (6%) Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 V +F I F L ++ P +T A + NY + +E + I + SF Sbjct: 271 VALFAIGFALMARRVAAPLRAVTEATQRISRGNYAEP----IEHTHRKDEIGRLARSFDR 326 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN---FR-----ALEQAPEQEAGKSFCCL 355 L + L A TD LT +PN FR A+E S L Sbjct: 327 MRLGIAAQQDEIRQL-------ADTDRLTGVPNRERFRRMLMEAMEHGGRSGEPLSVIAL 379 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSI-CRTLLPLMQENEKLYQLPGSELLLVLSGP-ETEGR 413 +D + ++ G + ++++ R L + E + +L G+E ++L G E R Sbjct: 380 DLDRFKQVNDVLGYALGDRLLQAVVARIASHLRAQREVVARLGGNEFAVLLPGADEASAR 439 Query: 414 --LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG--QLSWLAEQSCAHH 469 Q + S + +++ +D+ G + G LLG +++ A + H Sbjct: 440 DTAQRITRAFESPLV-FDDQMVDLSAGIGIACWPGPAHDADTLLGHAEIAMYAAKRRLHG 498 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD--EILARLK 527 + S E + + + LL+ +R A++ G+L L+ QP +G+G E L R + Sbjct: 499 AQIYDPSMES----SSAEALSLLSELRRAVEAGELRLFLQPKLRLDGQGGSGAEALVRWQ 554 Query: 528 YD-GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 + G++ P +F+P Q + L + E ++LA G R SVNL L+ Sbjct: 555 HPVRGLVPPMQFIPFAEQTGFVRQLTLWIFEQAARYLARPQVQGLGLRISVNLSTRDLMD 614 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +++ R+ L R+ + P + LEITE + + + +L GF+++IDDFGTGY Sbjct: 615 TDLSTRLGTLMARHGVEPGSFCLEITESAIMDDPGRAEAMLNRLSAQGFKLSIDDFGTGY 674 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKRL D +KID FV + + DA IVRS DLA LSVVAE VE+ Sbjct: 675 SSLAYLKRLPVDELKIDKSFVMGMAADAGDAQIVRSTIDLAHNLGLSVVAEGVESAAILE 734 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L L QGY IGRP P D Sbjct: 735 QLRGLRCDEAQGYHIGRPMPADD 757 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 123/443 (27%), Positives = 208/443 (46%), Gaps = 47/443 (10%) Query: 313 HRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMS 364 HR+E +R A D LT LPN RALE + + +DN + ++ Sbjct: 141 HRAE---QRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVALLFIDLDNFKVIN 197 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV-NILNS 423 G + ++++ + +++ + + + G E +++LS E+ + + ILN+ Sbjct: 198 DSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLESAFDAEAVAQKILNA 257 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW--LAEQSCAHHHVLALDS----- 476 Q+H+ G ++ + G +L P G+ W L A +H Sbjct: 258 LQLHFLIDGKELHISGSIGI------SLFPDDGEDIWTLLRNSDIAMYHAKKNGRNNCEF 311 Query: 477 -REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD--EILARLKYDG-GI 532 + EM + Q ++ + +R AL + +LLL+ QPI N G D E+L R ++ G G+ Sbjct: 312 FKPEM-NRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRWQHPGDGL 370 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC------DKKG---PRFSVNLMPLT 583 + P KF+ L + + + + +WL C ++G PR ++NL + Sbjct: 371 IYPVKFIRLAEETGM--------IIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQ 422 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 QK + I+R+ ++ + LEITE + + E ++ + QL + G I+IDDFG Sbjct: 423 FRQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFG 482 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY+N LKR Q + +KID FV+DI + D I+ +I +A A L V+AE VE +Q Sbjct: 483 TGYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQ 542 Query: 704 QQALLHKLGVQYLQGYLIGRPQP 726 Q A L G QG+ +P P Sbjct: 543 QLAYLALHGCTRFQGFYFSKPLP 565 >UniRef50_A4G5U9 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5U9_HERAR Length = 709 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 111/424 (26%), Positives = 203/424 (47%), Gaps = 24/424 (5%) Query: 325 QALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT L N R E+ + Q + + +D + ++ G + Sbjct: 277 QASHDELTGLINRREFERCLQSALHDIRTQHGTHTILYMDLDQFKIVNDTCGHHAGDILL 336 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL---QHMVNILNSRQIHWNNTGL 433 + + R L +++N+ L +L G E ++L E L + + + + WN+ Sbjct: 337 QQLTRVLKEKLRQNDILARLGGDEFGVLLRNCPAEPALNVAESLRQTASEFRFAWNDKLF 396 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLS---WLAEQSCAHH-HVLALDSREEMVSGQTTKQV 489 +G F ++ +L +L + +LA++ + HV D E + Q+ Sbjct: 397 SVGVSIGLLTFSDDELSLNEILSIVDGACYLAKEKGRNRIHVCHPDDGE---LSERKSQM 453 Query: 490 LLLNTIRTALDQGDLLLYAQPIR----NKEGEGYDEILAR-LKYDGGIMTPDKFLPLIAQ 544 + I AL++ ++L+ Q I +++ + E+L R L +G ++ P FLP + Sbjct: 454 GWVAKISNALEENRMVLFKQTIAPLQLSQQKIIHFEVLLRMLDEEGKLLPPSFFLPAAER 513 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 +NL R D V+++ + D S+NL T+ + + I F+ Y IS Sbjct: 514 YNLMTRIDFWVIKTAFSYYRDFCTDPAVAYTCSINLSGATVGDERLIAYIREQFQAYGIS 573 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + EITE A +N + ++ ++ L + G R A+DDFG+G +++ LK+L + IKID Sbjct: 574 PAGICFEITETAAIANLDRAVTLMQDLQQIGCRFALDDFGSGMSSFGYLKKLPINYIKID 633 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 G FVKD++ + +D +V +I ++ + +AEFVE ++ L ++ V + QGY IG+ Sbjct: 634 GSFVKDMLHDRIDRAMVEAINNIGHVMGIQTIAEFVEDEKTMIALQEMNVNFAQGYGIGK 693 Query: 724 PQPL 727 P+PL Sbjct: 694 PEPL 697 >UniRef50_B9R245 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R245_9RHOB Length = 892 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 119/430 (27%), Positives = 197/430 (45%), Gaps = 28/430 (6%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQ---------APEQEAGKSFCCLRIDNLEFMSRHYGL 369 + R A TD LT L N + + E S + +++ + ++ +G Sbjct: 454 DERVKKAAETDNLTELANRLSFRETLDHVVDIAGDADEVASSLLLIDLNDFKAVNDSHGH 513 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QI 426 ++ ++ + TL + + + +L G E LVL P TE ++ + N L + + Sbjct: 514 VVGDRLLQHVANTLKAVSEGGDLAARLGGDEFALVLK-PRTEEDIREIANGLCAVFDLPV 572 Query: 427 HWNN----TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + +GL +G G++ETL L ++ + + V D +E Sbjct: 573 NLDGLMVQSGLSVGVAIISADGTGSEETLSRADLALYKAKQEKRSAYRVFDADIAKEDAE 632 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGG---IMTPDKFL 539 + TK L IR +QG L ++ QPI N E D A +++ G + P F+ Sbjct: 633 RKRTKNAL----IRVVENQG-LDVFCQPILNLETHRVDHFEALVRWHQGEESYVPPSNFI 687 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 PL + L A+ VL +L+ LAT P D R VN+ L L R++ K Sbjct: 688 PLAEEIGLIAKVGDFVLSEVLRSLATWPNDY---RACVNVSVLQLGDGRFVERVLNGLKE 744 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 ISP + LE+TE S ++ ++ +L G +A+DDFG G++++ L+ L + Sbjct: 745 AGISPHRLELELTESVLMSAGSAAHEDLRKLRDAGLNLALDDFGIGFSSFGYLQELPFNK 804 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV ++ + A I+R+I LA + AE VET QQ +++ G Y QGY Sbjct: 805 LKIDRRFVSEVEKDEGSAAILRTIAALADNLDMKSTAEGVETAQQLSVVTACGCHYGQGY 864 Query: 720 LIGRPQPLAD 729 IG+P PL D Sbjct: 865 FIGQPIPLED 874 >UniRef50_A6DCT5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCT5_9PROT Length = 610 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 107/418 (25%), Positives = 196/418 (46%), Gaps = 23/418 (5%) Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQEAGKS-FCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 + Q+L DPLT N + + + + K+ IDN + ++ YG + ++++ Sbjct: 202 KEKFQSLIDPLTNTYNRKIINRIENENIKKTALLIFDIDNFKKINDTYGHNIGDIVLKNL 261 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGA 439 +T+ ++ N+ L + G E LL+L+ E + L+ + I N+ + NT +++G Sbjct: 262 TQTIKSQIRSNDYLIRYGGEEFLLILNNIEQKDALKKIEKIFNTIR----NTPINIGNKK 317 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM--VSGQTTKQVLLLNTIRT 497 + G L+P + + A + A + + + + ++++ +N I Sbjct: 318 LFITISGGVH-LEPEKEKNIFEAIKKADQELYKAKRTGKNKYCIYSENSEKIFAINEITD 376 Query: 498 ALDQGDLLLYAQPIRNKEGEGYD--EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 ++ +L+Y QPI N + + E LAR+KY I +P+ FL I N F + Sbjct: 377 FIESNSILVYLQPILNIKTNKIEKFEALARIKYKDEIFSPNTFLENIKNTNTYRDFTSII 436 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF----KRYHISPQAVILEI 611 L+ + K ++ + + SVN + + I LF K+Y + +EI Sbjct: 437 LDKVFKTISKYKVE-----ISVNFFAKDFFDE----KFITLFDEKEKKYKDLLSFLSIEI 487 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 E + N + ++ L + G +I+IDDFG+ Y+N L + D IKID VK++ Sbjct: 488 LENEQIENIQKLQNQLKILKEKGIKISIDDFGSDYSNLSYLTYITPDYIKIDSSIVKEVR 547 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +N I+++I LAK + +AEFVE + +L L V Y+QGY I P P+ + Sbjct: 548 SNINAQKIIKTIVILAKEFNAKTIAEFVEDKDSFKILKSLNVDYIQGYYISPPLPIEE 605 >UniRef50_Q1N0U8 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Bermanella marisrubri RepID=Q1N0U8_9GAMM Length = 625 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 138/247 (55%), Gaps = 5/247 (2%) Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKY-DGGIMTPDKFLP 540 Q + + ++ I AL + LY Q ++ + Y EIL RLK DG I P + Sbjct: 378 QRQQDMRRVHEINRALTEDRFTLYKQKVQRIASDKNYYYEILLRLKNPDGSISAPGAIIA 437 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 ++N+ + D VL + + +LA +P ++ F++NL TL + + L Y Sbjct: 438 AAEKYNIMGKIDYWVLRNTIAYLADYP--EEQASFAINLSGATLSDPSCINYLQHLIDTY 495 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 I+P + EITE +A + ++ + L G RI++DDFGTG +++ L++++ + Sbjct: 496 QITPSRLQFEITETEAVKHLSTTNIILSALRDMGCRISLDDFGTGSSSFSYLQQMKIQNL 555 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KIDGVF+KD+ N+++ IV S +AK+ +S AEFVET++ ALL +L V Y+QG+ Sbjct: 556 KIDGVFIKDLHHNSVNQAIVESAVKVAKSMGISTTAEFVETEEVVALLKELQVDYVQGFG 615 Query: 721 IGRPQPL 727 I +P+PL Sbjct: 616 IHKPEPL 622 >UniRef50_B1KCF3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1KCF3_BURCC Length = 935 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 126/449 (28%), Positives = 205/449 (45%), Gaps = 24/449 (5%) Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGK 350 V S ++C L + R E R A D LT LPN + L E + Sbjct: 482 VDASLNLCALALER-----EGSKERIRRLAFYDGLTGLPNRQLLMSQAESVLAAAVASQH 536 Query: 351 SFCCLRID--NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 SF + +D + + ++ G + + + L +++ + + +L G E ++VLS Sbjct: 537 SFAVMFVDLNSFKQVNDTLGHAAGDGLLSEVAQRLKIDLRDTDIVGRLSGDEFVIVLSPA 596 Query: 409 ETEGRLQHMVNILNS-RQ-IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW-LAEQS 465 + E L +N RQ + ++T L F + E++ L+ + E Sbjct: 597 DIELTLDFAERTMNRLRQPVQISDTNLRPAASMGIAIFPQHGESIGALMQHADMAMYEAK 656 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGEGYD-EIL 523 A HH + E M + + +++ L +R +L G+L L+ QP +R + Y E L Sbjct: 657 FAGHHEYRVFEPELMRAREARRKLGL--ALRDSLVAGELQLHYQPQVRLDDDSLYGVEAL 714 Query: 524 AR-LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSVNLM 580 AR D G + PD F+PL+ + L A F+ VL + LA C+ PR SVN+ Sbjct: 715 ARWFHRDFGNVAPDHFIPLVEECGLVAEFNRWVLTEACRQLAQW-CEAGLDVPRISVNIS 773 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 P A + L Y ++P + LE+TE +S M I+ +H G +AID Sbjct: 774 PTAFRDPAFASLVSSLLGTYKLAPSQLTLEVTEAVLLDATDSVMTTIQDVHSLGVNMAID 833 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L+RL + +K+D F+ ++ + +V S+ D+ L++VAE VE Sbjct: 834 DFGTGYSSLSYLRRLPVNEVKLDKSFISNVENSENARSLVNSVADICAKLHLTIVAEGVE 893 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T Q+ +L G Q QGYL P A+ Sbjct: 894 TDVQRQILQARGYQVAQGYLFSPPIEAAE 922 >UniRef50_C4Z459 Histidine ammonia-lyase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z459_EUBE2 Length = 723 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/257 (35%), Positives = 135/257 (52%), Gaps = 16/257 (6%) Query: 481 VSGQTTKQVLLLNTIRTALDQ--GDLLLYAQPIRNKEGEGYDEILARLKYDG---GIMTP 535 V T K++ + N +R A+ + +++ QP+ N + A +++D G M P Sbjct: 457 VENSTAKRLDIENNMRQAISNEINEFVVFYQPVVNVNTQMCTSCEALVRWDSKALGFMGP 516 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPC----DKKGPRF--SVNLMPLTLLQKNI 589 +F+PL L VLE A C D P F +VNL + LLQK++ Sbjct: 517 GEFIPLAEYLGLITSIGDYVLEE-----ACRRCKIWNDNGHPDFYINVNLSVVQLLQKDV 571 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I R+ + ++P+ ++LEITE A ++ + M I L K G RIA+DDFGTGY++ Sbjct: 572 VENIKRILDKTGVNPKNIVLEITESFAINDMQRVMEIITGLKKLGPRIALDDFGTGYSSL 631 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 +K+L DIIK+D F+ DIV + V+ I DL+K +V E VE ++Q LL Sbjct: 632 NYIKQLPLDIIKVDKTFIDDIVEDDYAQAFVKLIVDLSKTIGTKIVVEGVEHKEQFELLK 691 Query: 710 KLGVQYLQGYLIGRPQP 726 LGV Y+QGY G+P P Sbjct: 692 SLGVDYIQGYYFGKPVP 708 >UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=Enterobacteriaceae RepID=A4W933_ENT38 Length = 642 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 105/399 (26%), Positives = 186/399 (46%), Gaps = 14/399 (3%) Query: 338 RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 +E A + + +D + ++ YG + +R I + L+ + ++ LY+L Sbjct: 245 ETIENAVKSNNTVTVMLFDLDRFKVVNDTYGHDVGDMLLRQISQRLISMGLTSDTLYRLG 304 Query: 398 GSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 G E + SG + NI ++ + + + G + E L + Sbjct: 305 GDEFAFLSSGLTESSAVSLAQNICDAINQPYTIYNTIINITTSVGIVISDTERRSDYLYK 364 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 + LA + + + + + + L + + AL + ++Y QPI + + Sbjct: 365 FADLALYEAKNEGAGKIKVFRQWMLDKLQESRTLEHDMALALANKEFVVYYQPIVDSFTQ 424 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE----SLLKWLATHPCDK 570 E Y+ ++ + GI++PD F+P+ + + +LE + W+ P Sbjct: 425 EIYSYEALIRWIHPLKGILSPDTFIPVAEKTGMINEMGKSMLEMACREAVSWVI--PA-- 480 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + SVN+ P+ L K AG ++ + +S + + LE+TE F+ +++ M + +L Sbjct: 481 ---KISVNVSPVQLSSKAFAGIVVSILNETGLSAERLELEVTESSLFTESKTPMNTLNRL 537 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G +I+IDDFGTGY++ RL RL D IKID FV + T I+R IT +AK+ Sbjct: 538 RTLGVKISIDDFGTGYSSLSRLSRLAFDKIKIDKSFVNSVSTQEDALNIIRLITGMAKSL 597 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ VAE VETQ+Q L LG ++QGYL G+PQP D Sbjct: 598 NMKTVAEGVETQEQLESLQALGCDFIQGYLFGKPQPYID 636 >UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas aeruginosa RepID=A6V917_PSEA7 Length = 1105 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 113/433 (26%), Positives = 187/433 (43%), Gaps = 19/433 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSR 365 ++ + R A D LT L N RAL A E+ + + C + +D + ++ Sbjct: 659 KARAMQRELSYHASHDALTGLFNRTKFEEELRRALANAQERASQHALCFIDLDRFKVVND 718 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE---TEGRLQHMVNILN 422 G +R + R L + ++ L +L G E L+L + E ++ + Sbjct: 719 SAGHAAGDMLLRELSRILADRTRASDTLARLGGDEFGLLLFDCDLAVAEEVASKLIEQIC 778 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ--LSWLAEQSCAHHHVLALDSREEM 480 S + W D+G + L+ Q ++ A + + V E Sbjct: 779 SVRFPWEGRVYDVGASIGITALTATSRSTSELMSQADVACYAAKHAGRNRVSVYQFGHEE 838 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPI-----RNKEGEGYDEILARLKYDGGIMTP 535 V Q + +LL + +R AL+ L AQ I R G Y+ +L DG + P Sbjct: 839 VERQH-RDILLASGLREALENDRFQLQAQEIVPVVARRDGGRHYELLLRLYDPDGQMTPP 897 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+P +FNL A D V+ L G +NL +L ++ Sbjct: 898 GAFIPAAERFNLMASIDRWVINEALINFGPRIAAIDGLTIGINLSGNSLNDPLFLPYLLD 957 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + P+ + E+TE + + +++L G ++A+DDFG+G +++ LK Sbjct: 958 RIEHSPLGPERLYFELTETALMNQLSVASRIVDKLRDLGCKVALDDFGSGLSSFNYLKNF 1017 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IKIDG FV+++ + +D IV SI +A+ VAEFVE+++ L +LGV Y Sbjct: 1018 AVDAIKIDGSFVRNLDKSPVDQAIVDSINQIAQRLGAVTVAEFVESREILDHLARLGVDY 1077 Query: 716 LQGYLIGRPQPLA 728 QGY +GRPQP A Sbjct: 1078 AQGYAVGRPQPFA 1090 >UniRef50_C8R1Y2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1Y2_9DELT Length = 603 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/287 (32%), Positives = 153/287 (53%), Gaps = 13/287 (4%) Query: 449 ETLQPLLGQLSWLAEQSC------AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 E+LQ G+L A+Q+C + V D + V G + + +R AL G Sbjct: 301 ESLQA--GELLSRADQACHVAKRRGRNRVHCYDPEDPEVVG-LKRDATWVPMLRQALRNG 357 Query: 503 DLLLYAQPI-RNKEGEG-YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L QPI R ++G + E L RL +G + +P +F+P + L + DL V+E+ + Sbjct: 358 SFALEFQPIVRARDGACCHYEALIRLLENGKMYSPGEFIPSAERMGLIHQLDLWVVEAAV 417 Query: 561 KWLATHP-CDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 LA P + + P R S+NL L + + R + +SP+ ++ EITE A + Sbjct: 418 DRLAAMPLTEGQEPIRLSINLSAYALRNPVLMPLLERKLEMTGLSPRRLMFEITETTAVT 477 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + +E++ G R A+DDFG+G++ + LK D++KIDG FV +++ N D + Sbjct: 478 QLKQARELVERMRSLGCRFALDDFGSGFSTFNYLKHFPVDMLKIDGSFVVNMLKNPTDEL 537 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +VRS+ +LA + V+AEFVE + L ++GV YLQG+ +GRPQ Sbjct: 538 LVRSMVELAHSLDKQVIAEFVEDEATARRLREIGVDYLQGFYLGRPQ 584 >UniRef50_A4XVP2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XVP2_PSEMY Length = 770 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 127/420 (30%), Positives = 196/420 (46%), Gaps = 39/420 (9%) Query: 328 TDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP-- 385 TDPLT LPN L ++ S L +D + ++ YG +R + LL Sbjct: 359 TDPLTQLPNRARLLLDLQRTPRPSLILLNLDAFKEINGFYGHACGDQMLRHLGAQLLQHL 418 Query: 386 -LMQENEKLYQLPGSE---LLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAW 441 L ++ +LY+L E LL LS E R+ + + +++ W G ++G+ A + Sbjct: 419 RLEADSARLYRLTADEFAVLLPRLSDEALEARMNELGTFIQRQRLDWQ--GQEVGFNATF 476 Query: 442 G--RFDGNQETLQPLLGQLSWLAEQSCA--------HHHVL---ALDSREEMVSGQTTKQ 488 G R E Q G+ S LA + A +H+L AL REE + Sbjct: 477 GAARLSAG-EARQ---GRDSLLASATIALKLARLQQRNHLLYDPALKIREEY-----EQN 527 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILAR-LKYDGGIMTPDKFLPLIAQF 545 +L N ++TAL + LL + QPI + G G E L R L DG ++ P +FL + + Sbjct: 528 LLWANKVKTALQEDRLLPHFQPILDNHGGSIGKFECLVRMLDDDGQVINPGRFLGVAKKI 587 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L + +LE L+ P + FS+NL L+ ++ I + + P+ Sbjct: 588 RLHRQITRVMLEKCLERFRDLPYE-----FSINLSYEDLIDPQLSQTIKEQLQHSGMGPR 642 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 +I EI E + N I+++ G RIAIDDFGTGY+N+E L RL D+IKIDG Sbjct: 643 -LIFEILESEGIDNYSQVRTFIDEVKALGCRIAIDDFGTGYSNFEHLLRLNVDLIKIDGS 701 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 ++ + ++ + I A++ + VAEFV + Q + LG+ Y QG IG PQ Sbjct: 702 LIRQLDSDPNALAVTLGIVQFARSLGMQTVAEFVHSAAVQEKVLALGIDYSQGQHIGMPQ 761 >UniRef50_Q0G4W7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G4W7_9RHIZ Length = 489 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 111/424 (26%), Positives = 193/424 (45%), Gaps = 17/424 (4%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDNLEFMSRHYGLM 370 R+ ALTD LT LPN RA EQ E + IDN + ++ +G Sbjct: 39 RKARKSALTDELTGLPNRRAFSGHIEQYFRDSGSKAETKVAMLLFDIDNFKLVNDEHGHE 98 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHW 428 +R+ +L + +L G E + + G E E R + M + L+ S++ + Sbjct: 99 GGDQLLRAFSERILEAVGPECLFARLGGDEFAIAMFGEEAEERSREMASRLSVLSKKPYE 158 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 + + G G P + + + +A + + A +E + TK+ Sbjct: 159 CAGRTLVATSSIGGVACGGNLADVPAIMRRADIALYNAKENKRSAACFYDESMELVVTKR 218 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKY---DGGIMTPDKFLPLIAQF 545 L+ +R A+++G+L+L+ QPI + A L++ G ++P +F+P+ + Sbjct: 219 AALMRDLRHAVEKGELVLHFQPIVDLADSKLVSFEALLRWRHPSRGFVSPGEFIPIAEES 278 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L L V+E AT P + RF++NL P + + ++ ++ + P Sbjct: 279 GLILPIGLWVIEEACSVAATWP---EHIRFAINLSPRQFSDERLIPTVLGALEKNGVGPA 335 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + +E+TE + ++ + +L G +IA+DDFGTG+A+ L + D++KID Sbjct: 336 RLTVELTETAIIEHDGKALAALRKLRSEGVKIALDDFGTGFASLSYLTKFPFDVVKIDQS 395 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV++ N +++ SI DLA L VAE +E+ L+ K G QGYL GRP+ Sbjct: 396 FVREASRNNNADVVISSICDLAARLGLDTVAEGIESLDHLELVRKAGCNRGQGYLFGRPE 455 Query: 726 PLAD 729 P D Sbjct: 456 PAID 459 >UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Dickeya dadantii Ech703 RepID=C6C4P4_DICDC Length = 678 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 86/249 (34%), Positives = 132/249 (53%), Gaps = 4/249 (1%) Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEG--EGYDEILARLKYDGGIMTPDKF 538 S Q LL + AL L+ QP R G G++ ++ G++ PDKF Sbjct: 418 SHHGNHQPELLQALPKALALNQFRLWYQPKYRPPNGPIHGFEALIRWQHPQKGLLLPDKF 477 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 LP+ + L V+ + L H + ++N+ P+ Q N+ I Sbjct: 478 LPMAEKTGLIIAIGEWVINEACRQLQVWHQQGQVHWTVAINISPVQFDQHNLVSVISDAL 537 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 +Y I P + LEITE A N E S+ + +L + G +++IDDFGTGY+N L+RL A Sbjct: 538 AKYQIPPYMLTLEITESVAMRNLEKSLNILHELDRLGVKVSIDDFGTGYSNLLSLRRLPA 597 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +KID FVKD++ + +A++V +I ++A++ +L VVAE VET +QQ LL +LG LQ Sbjct: 598 RELKIDRTFVKDLLLHNKNAVVVTTIIEMARSMNLEVVAEGVETPEQQELLTRLGCYSLQ 657 Query: 718 GYLIGRPQP 726 G+L+ P P Sbjct: 658 GFLLAPPMP 666 >UniRef50_C0N6V7 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6V7_9GAMM Length = 605 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 83/236 (35%), Positives = 125/236 (52%), Gaps = 6/236 (2%) Query: 495 IRTALDQGDLLLYAQPIRNKEGEG--YDEILARLKYDGGIMT-PDKFLPLIAQFNLSARF 551 IR AL + + LL QPI + + E L R++ DGG++ P +F+P+ L + Sbjct: 368 IRAALKEENFLLEFQPIFALDSGAITHYECLIRMRGDGGVVYYPKEFIPVAEAMGLIHQI 427 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 D V+ L P F+VNL L +N+ I + K I P+ ++ EI Sbjct: 428 DFWVVAKAFDLLCGMP---DSISFAVNLSGNVFLDENLYRLIQQKLKETEIDPERIVFEI 484 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE A SN E + + L G R A+DDFG G+ +Y LK DI+KIDG F+ D+ Sbjct: 485 TETSAISNFEQTKRMVTNLRSLGCRFALDDFGAGFNSYSYLKHFPVDILKIDGGFITDLD 544 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + +D ++V+S+ D+A + VAEFVE + LL GV ++QGYL+G+PQ + Sbjct: 545 NDPVDQLLVKSMIDIAHSLGKKTVAEFVERESTLNLLKGYGVDFVQGYLVGKPQSI 600 >UniRef50_C5T9Y9 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Comamonadaceae RepID=C5T9Y9_ACIDE Length = 777 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/261 (37%), Positives = 137/261 (52%), Gaps = 12/261 (4%) Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG--YDEILARLKY-D 529 ALDS S QT LL +R A++ +L LY QP G+ E L R ++ Sbjct: 516 ALDS----ASAQTLS---LLTELRHAVEHHELRLYLQPKIALHGQPGLAAEALVRWQHPQ 568 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G++ P +F+P Q + L + E + +WLAT P + P R SVNL LL Sbjct: 569 RGLVPPMEFIPFAEQTGFVRQLTLWMFEEVCRWLAT-PAARHLPLRVSVNLSTRDLLDPE 627 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + R+ L RY ++ A+ LEITE + + + + +L + GF+++IDDFGTGY++ Sbjct: 628 LCHRLAALLARYGVAASALCLEITESAIMDDPQRAEAMLNRLSEHGFKLSIDDFGTGYSS 687 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL D +KID FV + + DA+IVRS DLA L+VVAE VETQ L Sbjct: 688 LAYLKRLPVDELKIDKSFVMGMESAGDDALIVRSTIDLAHNLGLTVVAEGVETQAILGHL 747 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 L QGY I +P P AD Sbjct: 748 RSLSCDEAQGYAISKPLPAAD 768 >UniRef50_Q30QU6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Campylobacterales RepID=Q30QU6_SULDN Length = 723 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 110/420 (26%), Positives = 203/420 (48%), Gaps = 23/420 (5%) Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 + + Q D LT L N AL+ A + K I ++ YG+ + + + Sbjct: 312 KHFSKQVYKDHLTNLKNRYALDDALTSQKSKVLILSNIKEFSLLNELYGVHVGNETLIQV 371 Query: 380 CRTLLPLMQENE-KLYQLPGSELLLVLSGP----ETEGRLQHMVNI-LNSRQIHWNNTGL 433 QE+ ++Y++ E +L+ + ++ +L ++ +NS I + Sbjct: 372 AHAFKEFAQEHSFEVYRISSDEYVLLKNDENFDEDSYSKLTEELHCKINSLNIVIHGVDE 431 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH-HVLALDSREEMVSGQTTKQVLLL 492 + G + +L+ L + S ++ + +D++E S QT + Sbjct: 432 IISIEIYSGIAHDHAHSLEDAQMALKKAKKNSLSYMIYSKNVDTKE---SSQTILNIK-- 486 Query: 493 NTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGG---IMTPDKFLPLIAQFNL 547 TI+ AL+ +++ + QPI +K G Y+ ++ +++D G I++P +FL + + Sbjct: 487 KTIKHALEHKNVVPFFQPITDKNGTIVKYEALVRIVEFDNGKKNILSPAEFLDISMKSGS 546 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 + ++LE A+ + + SVN +P L +I +I +++ SP V Sbjct: 547 YIKIAKEMLEQSFSIFAS-----RSEKISVNFLPNDFLNPSIMEALIIGIEKFE-SPNRV 600 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 ++EITE++ N E ++ +++L G IAIDDFG+GYANY + +++ D +KIDG + Sbjct: 601 VVEITEQEGVENFERLLHVVKKLRDIGILIAIDDFGSGYANYAHILQIKPDYLKIDGSLI 660 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 KDI+ + ++V+SI AK ++ VAE+VET++ LL GV QGY GRP L Sbjct: 661 KDILEDNESRILVQSIVRFAKELGITTVAEYVETKEIFELLKSYGVDEFQGYYFGRPTDL 720 >UniRef50_B8GPR3 Signal transduction protein n=2 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPR3_THISH Length = 571 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 118/422 (27%), Positives = 194/422 (45%), Gaps = 23/422 (5%) Query: 326 ALTDPLTLLPNFRALEQAPEQEAGKS-------FCCLRIDNLEFMSRHYGLMMRVHCIRS 378 AL D LT L N E ++ K+ + +D + ++ G +R Sbjct: 146 ALHDSLTGLINRHGFETRLKEALAKARRQRPSALLYIDLDQFKLVNDTCGHQAGDDLLRQ 205 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSG---PETEGRLQHMVNILNSRQIHWNNTGLDM 435 + L ++E++ L +L G E ++L + E + M++I+N + W + Sbjct: 206 LASLLQIPVREHDTLARLGGDEFGVLLDECTLEQAEQVARRMLSIVNDFRYTWGEHNFRI 265 Query: 436 GYGAAWGRFDGNQETLQPLL--GQLSWLAEQSCAHH--HVLALDSREEMVSGQTTKQVLL 491 G D +L ++ ++ A + + H+ D R M + Sbjct: 266 GASIGLTLLDDPDLSLSDVMRHADMACYAAKDKGRNRVHLFREDDRTLMARHSEMQWTAR 325 Query: 492 LNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILAR-LKYDGGIMTPDKFLPLIAQFNLS 548 +N AL+Q LLY Q I + G+ EIL R L G +++P F+P ++NL Sbjct: 326 INE---ALEQDRFLLYYQEIHPLKPDTAGHCEILLRMLDPSGEVISPWAFIPAAERYNLM 382 Query: 549 ARFDLQVLE---SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 D +VLE ++ L KG R+ +NL LTL + + + I P+ Sbjct: 383 PTVDRKVLELTLPRIRQLLREGQVPKGYRWFINLSGLTLGDDAFLAHVTERLREHAIPPE 442 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 A+ EITE +N +++ I+++ G +A+DDFGTG +++ L + AD IKIDG Sbjct: 443 ALGFEITETAVIANLGNAVRFIQRMRDLGCHVALDDFGTGLSSFSYLSNIPADYIKIDGG 502 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+D+ N + IV +I + L +AEFVET+ + L +LGV Y QGY I RP+ Sbjct: 503 FVRDMHENEMHQAIVEAINRIGHVAGLRTIAEFVETEGVRQRLAQLGVDYAQGYGIARPR 562 Query: 726 PL 727 PL Sbjct: 563 PL 564 >UniRef50_A6VX21 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VX21_MARMS Length = 823 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 144/548 (26%), Positives = 248/548 (45%), Gaps = 67/548 (12%) Query: 219 WLAALSVLLLLLCTPYE-NDFIAGYLVPVFFII--FTLGVGKLRYPFLN--LTWAVSTLC 273 + A + VL+ L+CT + + G+L F++ F L +G + LN + W V + Sbjct: 300 FFALIEVLMFLICTYWGIKAYRKGFLAVRFYLFSWFVLIIGSI----LNTLIFWKVLPIN 355 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 L E+ + ++ IL L+ FS + + RS LQALTDP T Sbjct: 356 LF---------TESIFPVSSILQ-LLGFSFAFADKAKQFERSR------KLQALTDPSTE 399 Query: 334 LPN-----------FRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMR----VHCIRS 378 LPN +EQ Q A + I N + +S+ +G I++ Sbjct: 400 LPNRTYYYDTLPTLLPNMEQNTPQLA---LIMIDISNYQTLSQAFGPAKADSAICEAIKN 456 Query: 379 ICRTLL--------PLMQEN-EKLYQLPGSELLLVLSGPETE----GRLQHMVNILN-SR 424 I + +L PL ++ +KL ++ + ++L+ + P+ ++Q +++I Sbjct: 457 IHKQILMMEGILIFPLPNKSIQKLIRITATNVVLISTTPDQIKQQISKIQQILDIPTLVN 516 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 +IH+ + Y + L L Q + +A S + + + S Sbjct: 517 KIHFRHQ-----YKIGSALYPSQGSDLDKLY-QNALIANNSVTYSSGSWAVFTDNLKSNH 570 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY--DEILARLKYDG-GIMTPDKFLPL 541 Q+ L+ + ++ L + QP N EIL R + G ++P +F+PL Sbjct: 571 A-HQLGLITQLTEDIENEKLYFHIQPQVNLADRSIIGGEILVRWHNEHLGQVSPAEFIPL 629 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 Q L + +LE + +W HP R S+N+ L LLQK+ A ++I + +H Sbjct: 630 AEQTGLIYKLTDMLLEKVFQWAFEHPAALSTQRLSINISALDLLQKDFAIQVIEKLQNHH 689 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 +S +EITE F N + N+ QLH GF++AIDDFG GY++ + L L+ D +K Sbjct: 690 LSACKFTIEITETSIFQNNDIVHNNVRQLHHAGFKLAIDDFGVGYSSMQNLVALETDELK 749 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV +++ + + R++ DL KA ++ VAE +E+++ LL + Q QGY + Sbjct: 750 IDQFFVMNLLNDPQSQTLCRNMIDLCKALNIVSVAEGIESEEILQLLLQWQCQIGQGYHL 809 Query: 722 GRPQPLAD 729 RP +D Sbjct: 810 YRPMSPSD 817 >UniRef50_Q31JC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JC5_THICR Length = 632 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 115/415 (27%), Positives = 197/415 (47%), Gaps = 21/415 (5%) Query: 326 ALTDPLTLLPNFRALEQAPEQ--EAGKSFCCLRIDNLEFMSRHYGLMMRV-----HCIRS 378 AL D LT LPN R L ++ +A F + +D F + + L V I+ Sbjct: 206 ALKDALTGLPNRRNLSYEAQRMLDATYPFVLIMMDLDRFKTINESLGHSVGDLMLQKIKD 265 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN---ILNSRQIHWNNTGLDM 435 +LP + L + G E + ++ G E ++ M+ + R +H N L + Sbjct: 266 RFELVLP---QGAMLSRFGGDEFVFIIPGIRVEQDVEQMIRDFLKVVERPMHLNGLNLHI 322 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 W + + ++ LL + + +A ++ V + +++ N I Sbjct: 323 SASFGWVFAPEDGKDVESLL-RFADVAMHMAKQRQGVSYLRYSGQVDHYHQRLLVIENRI 381 Query: 496 RTALDQGDLLLYAQPI-RNKEGEGYD-EILARLKYDG-GIMTPDKFLPLIAQFNLSARFD 552 RTA+++ ++ + QP+ G+ E LAR D G ++PD+F+P+ NL + Sbjct: 382 RTAVEEKQIVPFYQPMFSTVTGDLVGVECLARWHDDELGWVSPDEFIPIAEDINLIGKLG 441 Query: 553 LQVLESLL---KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 +LE + LA C K FSVN P L + ++ L ++Y + P+ + + Sbjct: 442 ETILEQAIITAGKLAKF-CPLKDVYFSVNASPYQLSEIGFVNKVKSLLEQYDLPPKLLKI 500 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE E ++ + +L G IA+DDFGTGY+ + L+ DI+K+D FV++ Sbjct: 501 EVTESLFIGGNEYAINVLGELRALGVSIALDDFGTGYSAFAVLREGCIDILKVDKSFVQN 560 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 + N + +V I +A +L+VVAE VET+ Q+ALL ++G LQGYL+ RP Sbjct: 561 MADNDQEKALVAEIIQMAHIMNLTVVAEGVETKAQKALLAEIGCDVLQGYLLARP 615 >UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Photobacterium profundum RepID=Q1YXX2_PHOPR Length = 725 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 114/423 (26%), Positives = 198/423 (46%), Gaps = 24/423 (5%) Query: 326 ALTDPLTLLPNFRALEQAPEQEAGKSFCC--------LRIDNLEFMSRHYGLMMRVHCIR 377 A D LT L N R L + EQ ++ CC +D+ + ++ G + ++ Sbjct: 299 AFYDYLTGLANRRLLNEHLEQVIQQTECCGNSAALLCFDLDDFKRINDSQGHDIGDCVLQ 358 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGP---ETEGRLQHMVNILNSRQIHWNNTGLD 434 I L ++ +N+ + +L G E ++LS GR+ + + S I NN L Sbjct: 359 QISHRLNSVVNKNDIVARLGGDEFTVLLSASYSASDAGRIAGQLIEVISEPIFLNNKELS 418 Query: 435 MG--YGAAWGRFDGNQ-ETLQPLLGQLSWLAEQSCA-HHHVLALDSREEMVSGQTTKQVL 490 + G DGN TL + A++S ++H + + + +V Sbjct: 419 VSASVGITMIPSDGNDVSTLLRNADMAMYSAKKSGKRNYHFF-----NKALQKKALDKVS 473 Query: 491 LLNTIRTALDQGDLLLYAQPIRNKEGEG---YDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + ++ TA+ + +L+ QP+ N Y+ ++ G++ P++F+ + + Sbjct: 474 IEESLDTAISKKQFVLHYQPVFNFYSNKLCCYEALIRWNHPREGLLYPERFIGIAEESGK 533 Query: 548 SARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 V++ + + H K R +VNL P ++ I R+ + I + Sbjct: 534 IKNIGYWVIQEVCNVIKMHQLHIGKRHRIAVNLSPRQFNDPDLLENIRRIIRNVGIDARF 593 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + +EITE N ES++Y + Q + G +AIDDFGTGY++ LKRL D +KID F Sbjct: 594 LEIEITESTLMENVESAIYTLRQFKELGITVAIDDFGTGYSSLAMLKRLPVDKLKIDRSF 653 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 VKD+ +N D IV+++ +A +SV+AE +ETQ+Q LL + G + QGYL RP P Sbjct: 654 VKDLDSNNSDQKIVQALISMAHTLQISVIAEGIETQEQFNLLQQYGCDFGQGYLFSRPVP 713 Query: 727 LAD 729 + + Sbjct: 714 ITE 716 >UniRef50_Q2SJ14 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q2SJ14_HAHCH Length = 559 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 115/432 (26%), Positives = 203/432 (46%), Gaps = 29/432 (6%) Query: 319 NRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLM 370 R H A D LT L N R AL + E+ L +D + ++ G + Sbjct: 134 ERTLHHMAYHDSLTDLVNRREFERRLKSALNSSKERGLTHMLLYLDLDQFKIINDTCGHV 193 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR----QI 426 ++ + L ++E++ L +L G E ++L E R + LNS + Sbjct: 194 AGDELLKQLAILLSKHIRESDTLARLGGDEFGILLESC-AERRAIQLAQELNSEVRNFRF 252 Query: 427 HWNNT----GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE-EMV 481 W L +G A + E L ++ A + + + S + EM+ Sbjct: 253 VWQQKPFTISLSIGIVAVTSEYGSGAEILSH--ADIACYAAKDKGRNTIQVYQSDDVEMM 310 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEG-YDEILARLKYDGGIMTPDK 537 +T Q ++ IR AL++ LY QP+ G G + E L RL+ ++ P Sbjct: 311 RRRTEMQ--WISRIRIALEENRFFLYQQPMERIGPDRGAGLHTEFLLRLREGDEVIPPGA 368 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLAT--HPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+P +++L D +V+E + ++LA KG F +NL +L + I + Sbjct: 369 FIPAAERYSLMPLIDRRVIELVFQYLAESGKGMADKGAYF-INLSGASLSDDKVFEDIRK 427 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 ++Y I P+ + EITE A ++ ++ I ++ + GF+ A+DDFG G +++ LK + Sbjct: 428 NLRKYKIRPERICFEITETAAIAHLAETVEFIREIREEGFKFALDDFGCGMSSFSYLKTI 487 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KIDG FV++++++ +D IV + + A L+ +AEFVE +Q + L ++GV Y Sbjct: 488 PVDYLKIDGSFVRNMLSDPIDVGIVEACNRIGHAAGLTTIAEFVENEQIKEKLIEIGVDY 547 Query: 716 LQGYLIGRPQPL 727 QG+ + +P+PL Sbjct: 548 AQGFAVSKPKPL 559 >UniRef50_A1K5I8 Conserved hypothetical membrane protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5I8_AZOSB Length = 856 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 114/437 (26%), Positives = 202/437 (46%), Gaps = 63/437 (14%) Query: 326 ALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT L N R L+++ + + +DN + ++ HYG ++ Sbjct: 428 ATRDPLTDLYNQRVFWELLDYELDRSQRHATRATLLLIDLDNFKLINDHYGHATGDRFLQ 487 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGY 437 R++ ++ + L + G E +++L PETE L+ GY Sbjct: 488 QFSRSMQQALRGGDILARYGGDEFVVIL--PETE---------------------LEQGY 524 Query: 438 GAAWGRFDGNQETL------QPLLGQLS-----WLAEQSCAHHHVLALDS--------RE 478 A D ++ P+ G +S + + A L D+ + Sbjct: 525 ATARRLLDATRDIALEIPGNDPIRGTVSIGLAVYPDHANTAKDLFLFADNMMYRAKAEGK 584 Query: 479 EMVSGQTTKQVLLL--------NTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKY 528 E V+ + + V+ + + A+++ ++ + QPI E E+L+RL+ Sbjct: 585 ERVAVPSEEDVMAVFRDVSEMSMAVLHAVNERRIIPFFQPILGIEDGRVAAVEVLSRLEV 644 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 +G ++ D+F+ + + + R D V+E+ L + D G F NL P L+ Sbjct: 645 NGQLLRADQFIEIAEKIGVIHRLDAIVIEAALARV--RESDFDGDIF-FNLSPRALVLAE 701 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 A + + I+P+ ++ EITE N I L GFR+AIDDFG+G+++ Sbjct: 702 FARTLRSIVADSGIAPERIVFEITERDTVKNLSLLERFICDLKAEGFRLAIDDFGSGFSS 761 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 + L+R D++KI+G F+ ++V + D + V+SIT+L++A + VVAEFVE+ + ALL Sbjct: 762 FHYLRRFPFDVLKIEGDFIANMVNSERDRIFVQSITELSRALKIKVVAEFVESAEVLALL 821 Query: 709 HKLGVQYLQGYLIGRPQ 725 + G+ Y QGY +GRP+ Sbjct: 822 REFGIDYAQGYHVGRPE 838 >UniRef50_B9ZQM9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQM9_9GAMM Length = 792 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 122/513 (23%), Positives = 222/513 (43%), Gaps = 26/513 (5%) Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 ++ + L VF +I ++ +P + L ++Q + +Y + + Sbjct: 264 DEAVNHRLDDVFMLIDASSGTRIYHPLTECVYD-GMASGLRHDQMLVSRTGQQYEIEEVA 322 Query: 296 AVLISFSVCLLYMVRIYH---RSEWLNRRWHLQALTDPLTLLPNFRALEQ--------AP 344 + + + S ++ ++ RS L R A D LT LPN E+ A Sbjct: 323 SPIRNRSGAIIGAALVFRDVTRSRSLERDLIWAARHDELTGLPNRAEFERRLRKMVIHAR 382 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 S L +D + ++ G +R + ++ ++ L +L G E ++ Sbjct: 383 RNGIDHSLIYLDLDQFKVVNDTCGHPAGDELLRQLATQFQERLRSSDVLARLGGDEFGIL 442 Query: 405 LSG---PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD---GNQETLQPLLGQL 458 L E E + + + + W +G D G+ E Sbjct: 443 LERCTLGEAEAIAEKIRASVAEGRFEWQGKVFTVGVSIGVAPIDPDTGDAEQFMSKADAA 502 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ---PIRNKE 515 +LA+++ + + S +E V+ + + I A++ L L+ Q P+ K Sbjct: 503 CYLAKEA-GRNRIHVTHSGDENVA-YCEDHMHCVQAISEAIEADRLWLHGQNICPVSGK- 559 Query: 516 GEGYDEILAR-LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 G+GY E+L R L G +++P F+P +F + + D V+ +L +A KG R Sbjct: 560 GKGYTEVLVRVLDQKGELLSPGTFIPAAERFGIMPQIDRWVIRRVLTHMANPGSGFKG-R 618 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +SVNL +L + I ++F+ + P + EITE A +N + + +++L G Sbjct: 619 YSVNLSGQSLCDIEMLDFITKIFRHTRVDPSRICFEITETAAIANLDQASRFMKELRGLG 678 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 R A+DDFG G +++ L+ L+ D IKIDG FV+D+ + + +V SI + L Sbjct: 679 CRFALDDFGVGMSSFGYLRDLKVDYIKIDGSFVRDMAEDPIHHAMVESIHHIGHVMGLET 738 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VAEFV + L ++G+ Y QG+ + RP+PL Sbjct: 739 VAEFVSDPRLLVSLREIGIDYGQGFGLHRPEPL 771 >UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Chromatiales RepID=B8GT56_THISH Length = 958 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 123/460 (26%), Positives = 207/460 (45%), Gaps = 42/460 (9%) Query: 305 LLYMVRIYH---RSEWLNRRWHLQALTDPLTLLPN--------FRALEQAPEQEAGKSFC 353 +L +V ++H ++ + R+ QA D LT L N +AL QA ++ A + Sbjct: 500 ILGVVLVFHDVSKTRQMARQLSWQATHDALTGLFNRYEFEQRLAQALAQARDRLAHHAVL 559 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEG 412 + +D + ++ G ++ + L+ ++E++ L +L G E ++L P + Sbjct: 560 YMDLDQFKVVNDTCGHSAGDELLKQLAYLLMGKVRESDTLARLGGDEFGVLLENCPLDKA 619 Query: 413 R--LQHMVNILNSRQIHWNNTGLDMGYGAAWGRF-DGNQETLQPLLGQLSWLAEQSCAHH 469 R Q + + + W +G DGN + L ++ A+ +C Sbjct: 620 REIAQELRQTVRDFRFSWKGKSFQIGISIGLVMISDGNLD-----LAEVLSAADMACYAA 674 Query: 470 HVLALDS-----REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD---- 520 L D E+ + ++ +N I AL +LY Q I G D Sbjct: 675 KDLGRDRIHVYHAEDADLQRRHVEMQAINRITDALTHDRFVLYTQRIVATGAAGPDDGGE 734 Query: 521 --EILARL-KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH---PCDKKGPR 574 EIL R+ G ++ P F+P +++L D V+ +A H C G Sbjct: 735 HMEILLRMVDEKGDLVPPGAFIPAAERYDLMPAIDRWVIRRFFSTMAQHIREECGVDGSG 794 Query: 575 -------FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 +++N+ ++ + G + + + I P A+ EITE A +N +M I Sbjct: 795 GSASGCLYAINISGASINDETFLGFVTEQLETHRIPPTAICFEITETAAIANLTRAMNLI 854 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L K G R ++DDFGTG +++ LK L D +KIDG VKDIV++ +D +V +I + Sbjct: 855 NELRKRGCRFSLDDFGTGVSSFGYLKNLPVDYLKIDGSLVKDIVSDPIDRAMVDAINRIG 914 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + + VAEFVE + A L +LGV Y QGY I RP+PL Sbjct: 915 QVMGIHTVAEFVENDEILASLRELGVDYAQGYGIDRPKPL 954 >UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Tax=Proteobacteria RepID=Q88M14_PSEPK Length = 973 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 121/427 (28%), Positives = 198/427 (46%), Gaps = 33/427 (7%) Query: 325 QALTDPLTLLPNFRALEQAPEQ-------EAGK-SFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT L N R E EQ +AG+ S L +D + ++ G + Sbjct: 528 QATHDALTGLANRREFEYRLEQALNDLARQAGRHSLMFLDLDQFKLVNDTCGHAAGDELL 587 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSG--PETEGRL-QHMVNILNSRQIHWNN--- 430 R IC L ++E + L +L G E ++L P+ R+ + + ++ S W Sbjct: 588 RHICAVLQSGLREGDTLARLGGDEFGVLLENCPPDQAERIGEQLRQMVQSLHFVWKGRPF 647 Query: 431 -TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL--ALDSREEMVSGQTTK 487 T + +G + G E ++A++ + + A DS M G+ Sbjct: 648 VTTVSIGL-VHMAQAPGTLEASLRAADMACYMAKEKGRNRVQVYHADDSELSMRFGE--- 703 Query: 488 QVLLLNTIRTALDQGDLLLYAQ---PIRNKEGEGYDEILARLKYDGG-IMTPDKFLPLIA 543 + + + AL++ LYAQ P++ EG G+ EIL RL + G + P F+P Sbjct: 704 -MAWIQRLHVALEENRFCLYAQEIAPLKTFEGPGHIEILLRLHDESGRTILPSSFIPAAE 762 Query: 544 QFNLSARFDLQVLESLLKWLATHPC---DKKGP--RFSVNLMPLTLLQKNIAGRIIRLFK 598 ++ L D V+ ++ ++ C ++GP ++NL ++ + RLF Sbjct: 763 RYGLMTALDRWVVRNV--FMVIRKCLEEGREGPLSTCAINLSGSSIGDDKFLEYLQRLFV 820 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 Y I P+ + EITE A +N S++ I +L G R ++DDF G +++ LK L D Sbjct: 821 EYAIPPRMICFEITETSAIANLGSAIRFINELKGLGCRFSLDDFCAGMSSFAYLKHLPVD 880 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KIDG FVKD++ + ++ +V I + +AEFVET + L ++GV Y QG Sbjct: 881 YLKIDGSFVKDMLDDPVNRAMVEVINHIGHVMGKRTIAEFVETPLIEQALQEIGVDYAQG 940 Query: 719 YLIGRPQ 725 YLI RPQ Sbjct: 941 YLIERPQ 947 >UniRef50_A3ISZ5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ISZ5_9CHRO Length = 750 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 116/446 (26%), Positives = 208/446 (46%), Gaps = 34/446 (7%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLE 361 R + L R+ QA D LT L N R+ E+ A + C L +D + Sbjct: 304 RDVTKPRQLARKIAWQANHDGLTKLMNRRSFEEQLDRAILEARTHQNSHILCYLDLDQFK 363 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL------SGPETEGRLQ 415 ++ G + +R + ++ ++K+ +L G E ++L +G + +L+ Sbjct: 364 VVNDTCGHIAGDELLRQLAELFNHQVRTSDKIARLGGDEFGILLHQCPLQAGKQIADKLR 423 Query: 416 HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ--PLLGQLSWL----AEQSCAHH 469 ++ + W++ GA+ G + N++TL LL + Sbjct: 424 KLIEDF---RFTWDDKTF--AIGASIGLVEINEDTLDLNSLLSAADAACYAAKDNGRNRL 478 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI----RNKEGEG-YDEILA 524 H+ D E V+ Q ++ + + I AL++ LY Q I +K+G+ ++E+L Sbjct: 479 HIYQADDHE--VAKQREERQWI-SKIHLALEENRFCLYQQKIIPVNPSKKGQNNHNELLI 535 Query: 525 RL-KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLT 583 R+ +G I+ P F+P +++L D V+ K+ +T +K +++NL + Sbjct: 536 RMIDREGKIVPPMAFIPAAERYDLMPVLDRWVVSHFFKYYSTLTNSQKQEIYTINLSGSS 595 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L + + + K + ISP+ + EITE A +N ++ I +L K G A+DDFG Sbjct: 596 LTSEQFLNFLKQQLKEHPISPETLCFEITETTAIANLSKAITFIRELKKIGCHFALDDFG 655 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 +G +++ LK L D +KIDG F+KDI+ + +D +V I + + +AEFVE+ + Sbjct: 656 SGMSSFGYLKNLPIDYLKIDGSFIKDILKDPIDCEMVECINRVGHVMGIQTIAEFVESNE 715 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 L K+ + Y QGY I +P PL D Sbjct: 716 ILQKLQKMNIDYAQGYGIAKPCPLFD 741 >UniRef50_A6DBD8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBD8_9PROT Length = 651 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 114/417 (27%), Positives = 207/417 (49%), Gaps = 28/417 (6%) Query: 326 ALTDPLTLLPNFRALEQAPEQ--EAGKSFCC--LRIDNLEFMSRHYGLMMRVHCIRSICR 381 LTD LT L N + LE++ ++ + FC L +DN + ++ +YG + I I Sbjct: 232 TLTDYLTRLGNRKFLEKSVKELINKNEKFCMVFLDLDNFKEINDYYGHSVGDELIIKISE 291 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETE----GRLQHMVNILNSRQIHWN---NTGLD 434 L ++E+E + ++ G E +L+L G + + RL ++N LN R + + T + Sbjct: 292 ILKEFIKEDEIISRVGGDEFVLILKGCDDKTYINNRLNKLLNQLNRRWVLRDYEIKTSVS 351 Query: 435 MGYGAAWGRFDGNQETLQPLLGQ--LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 MG + N + LL + ++ +S + V D +M+ + K+ ++ Sbjct: 352 MGVSI----YPDNAIIYEELLKKSDIALYESKSRGKNSVTFFD---DMLEVKVKKEFIIK 404 Query: 493 NTIRTALDQGDLLLYAQPIRNKEGEGYD-EILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 N + AL++ D LY QP + G+ E L R + I+ P++F+P+ + L + Sbjct: 405 NDLVKALEKNDFSLYLQPKVDMTGKIVGCEGLIRWIKNNQIIPPNEFIPIAEKSGLILKI 464 Query: 552 DLQVLESLLKWLATHPCDK--KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 V++ + D+ K + S N+ PL +N + ++ K + + + Sbjct: 465 GEWVMKKSFDIVKEFQNDEDLKNIKLSFNVSPLQFKCENFLLNLEKI-KEF---ANMLEI 520 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE + + + IE++H GF+I +DDFGTGY++ LK D +KID F+ D Sbjct: 521 EITESVFIEDKKKAKEIIEKIHNLGFKINLDDFGTGYSSLSVLKEFDIDYLKIDKAFIDD 580 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 I++ + V++I +++K+ S+ VAE VE+++Q +L +GV QGYL +P P Sbjct: 581 IMSEN-GMVFVKTIVNMSKSLSIKTVAEGVESKEQFNILKNIGVDVYQGYLFSKPLP 636 >UniRef50_C5AKX9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AKX9_BURGB Length = 995 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/245 (33%), Positives = 129/245 (52%), Gaps = 5/245 (2%) Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYD-EILARLKY-DGGIMTPDKFLPLI 542 + + L+ T+ L+L QPI + GE D E+L RL+ DG +++ F+ + Sbjct: 715 RDLALIGTLSEEAVPEGLVLAMQPIVSVTHAGEALDFEVLLRLRREDGTLLSAADFIDAV 774 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRYH 601 + DL VL S+L W+ + RF VNL +L + I + R + + Sbjct: 775 ERLGTIGAIDLWVLSSVLAWIERNQATLAKTRFICVNLSGASLNDERIVAEMFRRLEAHA 834 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + LEITE A + ++S + + + H G RIA+DDFG G+ +++ LK L AD +K Sbjct: 835 SIAHLLCLEITETVALHDLKTSQHFVARAHDMGVRIALDDFGAGHTSFKYLKALSADALK 894 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 IDG FV+ + + D IV SI DLA+ + +AE+VE + L +GV Y+QGY + Sbjct: 895 IDGEFVRSMCEHPADIAIVESIVDLARNLGMRTIAEWVEDTRTFEALRAIGVDYVQGYAV 954 Query: 722 GRPQP 726 GRP P Sbjct: 955 GRPVP 959 >UniRef50_A4Y0K2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0K2_PSEMY Length = 960 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/247 (32%), Positives = 134/247 (54%), Gaps = 6/247 (2%) Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG---YDEILARLK--YDGGIMTPDKFLPL 541 +Q+ + +R A ++G L+ QP++ + + E+L R + G ++P +FL Sbjct: 698 RQLQWITRLREACERGHFELFFQPVQALQSAASGLHYEVLLRYRDPASGEWVSPAQFLDA 757 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 A+++ D V++ L WLA +P + + +VNL +LL + + R+ Sbjct: 758 AARYDFLGAIDRWVIQHLCAWLAANPRHLAQLAQVNVNLSASSLLDSAFHQLLEQELSRH 817 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P + +E+TE A S I++L G ++A+DDFG+G+A+Y L+ L DI+ Sbjct: 818 QLPPGKLCIEVTEMVALGELGVSAQWIDELRSKGLKVALDDFGSGFASYAYLRHLPLDIL 877 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KIDG F+ I ++ ++ +V S+ +A L VAEFVETQ L +LG+ Y QGY Sbjct: 878 KIDGSFISGIESDPINQAMVGSMRQIASQLGLLTVAEFVETQASLDCLRRLGIDYAQGYF 937 Query: 721 IGRPQPL 727 +GRPQPL Sbjct: 938 VGRPQPL 944 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 127/428 (29%), Positives = 195/428 (45%), Gaps = 40/428 (9%) Query: 326 ALTDPLTLLPNFR----ALEQAPEQEAGKSFCC----LRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN R LEQA A C L +DN + ++ G M +R Sbjct: 615 AYNDPLTGLPNRRLLLDRLEQALAMSARHQLCGAVMMLDLDNFKTINETQGPDMGDRLLR 674 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSG-----PETEGRLQHMVNIL----------N 422 + R L + E+E L + G E ++VL E R + M + + Sbjct: 675 EVARRLRDCVPEDETLARHGGDEFVVVLKDLGADPQEAANRAEEMGQTILAAIRAPFDID 734 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA--EQSCAHHHVLALDSREEM 480 +Q H T L +G F G +E+ LL + S LA E A L + Sbjct: 735 GQQHH---TALSVGIAI----FRGVRESADELL-KRSDLAMYEAKAAGRDTLRF--FDPQ 784 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKY-DGGIMTPDKFL 539 + +++ L +R LD G L L+ QP ++ E L R ++ D G ++P +F+ Sbjct: 785 MQAAVSERAALEADLRAGLDAGQLELFYQPKVDQGRITGAEALVRWRHPDRGFISPAEFI 844 Query: 540 PLIAQFNLSARFDLQVLESLLKWLA---THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 PL + L R V+ S LA HP + +VN+ P + + +++ Sbjct: 845 PLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGE-LTVAVNVSPRQFHEGSFVPQVLEA 903 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + LE+TE + E ++ + QL +G ++DDFGTGY++ LKRL Sbjct: 904 LAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGYGVGFSLDDFGTGYSSLAYLKRLP 963 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID FV+D++T+ DA+I R+I L + L VVAE VET+ Q+A L + G Sbjct: 964 LHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLRVVAEGVETEAQRAFLERNGCHAW 1023 Query: 717 QGYLIGRP 724 QGYL+ P Sbjct: 1024 QGYLLSPP 1031 >UniRef50_C3KBD8 Putative sensory box GGDEF/EAL domain protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KBD8_PSEFS Length = 409 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/241 (33%), Positives = 133/241 (55%), Gaps = 4/241 (1%) Query: 491 LLNTIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L N +R A++ + L+ QP + G + +L + D G ++P F+P++ L Sbjct: 155 LENALRQAVEHHEFTLHYQPKVEVASGRLCALEALLRWERPDYGAVSPAVFVPILESLGL 214 Query: 548 SARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 V+E + + +A GP SVN+ L++ ++ I RL K+ + P Sbjct: 215 IVPVGRWVIEQVCRQIAEWQQGPIGPVEVSVNVSGHQLIEGDLIADIARLLKQNQVEPHW 274 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + +E+TE N + ++ ++++LH G +I+IDDFGTGY++ L+R D +KID F Sbjct: 275 LEVELTEGSLMENTQHTIASLQRLHTMGVKISIDDFGTGYSSLAYLRRFPIDTLKIDIAF 334 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 ++++ +N DA I R+I +LA + +L VVAE VETQ Q A L + G +QGYL RP P Sbjct: 335 IREVTSNPQDAAITRTIIELAHSLNLRVVAEGVETQAQLAFLKEAGCDQIQGYLFSRPLP 394 Query: 727 L 727 + Sbjct: 395 V 395 >UniRef50_Q15NX4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NX4_PSEA6 Length = 918 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 110/430 (25%), Positives = 191/430 (44%), Gaps = 43/430 (10%) Query: 325 QALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT L N R + A CC+ +DN + ++ G + + Sbjct: 501 QANYDALTGLVNRRHFVSLLKRYFAEKNNNVAPSYLCCIDVDNFKLVNDSLGHQIGDGVL 560 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVL---SGPETEGRLQHMVNILNSRQIHWNNTGL 433 + L L+ N+ L +L G E L+L S E+ ++++ ++ +W + Sbjct: 561 TEVAEVLSHLVNSNDTLGRLGGDEFALLLVDRSLEESTSLCKNLIQSVSEHAFYWGGRQI 620 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ--------- 484 ++G TL+ L + L++ L+ D +E+ G+ Sbjct: 621 NIGISIGM-------VTLERDLSDVELLSKAG------LSRDKAKELGRGRLFFAEAGCT 667 Query: 485 ----TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG----YDEILARLKYDGG-IMTP 535 + + I L G L QPI + + EIL R + G ++P Sbjct: 668 DMLRDQAHIGYIANISHDLKLGRFSLVKQPIVGLKNTNQHILHYEILIRYHNENGQFVSP 727 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+P+ + + + D V+++ L AT+ + S+NL +++ + + ++I Sbjct: 728 GVFIPVAEKHGVISLIDSWVVKTTLANYATY-FPEGNVTVSINLSGVSVSNDDFSRQVIN 786 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 L K I+PQ + EITE S ++ I +L G + A+DDFG+G +++ LK++ Sbjct: 787 LIKTSRIAPQNICFEITETAVISRIGQALDFIHELKAIGVKFALDDFGSGTSSFGYLKQI 846 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KIDG VKDI D IV S+ ++AK + VAEFVE + +L +G+ Y Sbjct: 847 PVDYLKIDGSLVKDIHNQPTDRAIVESVHNIAKMMGMKTVAEFVENDEICRVLQDIGIDY 906 Query: 716 LQGYLIGRPQ 725 QGY +G+PQ Sbjct: 907 GQGYGLGKPQ 916 >UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3I9_9PROT Length = 1123 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 129/476 (27%), Positives = 221/476 (46%), Gaps = 60/476 (12%) Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--- 338 L+GV EY + +LI I R E + L + +D LT LPN R Sbjct: 662 LRGVPVEYESQPAVQLLIQ---------DISSRKE-AQEQLRLLSYSDELTGLPNRRLYS 711 Query: 339 -----ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 A A ++ S L +D + ++ G ++++ LL ++ ++ Sbjct: 712 DRVEQACSMARRRKRPISLLFLDLDRFKLINDTRGHACGDMVLKTVANRLLQTLRVSDTA 771 Query: 394 YQLPGSELLLVLSGPETE--------GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD 445 ++ G E ++L PETE G+L +N + I N L +G F Sbjct: 772 ARMGGDEFAVLL--PETEPDKALRVAGKLIAALN----QPILIGNQELIIGASIGLASFP 825 Query: 446 GNQETLQPLLGQLS---WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + E + LL + A+Q+ + H + ++ +++ L +++R A G Sbjct: 826 ADGEDGETLLKHADSAMYYAKQNRLNIHCFS-----SVMEAVAQRRMQLEDSLRLAAGSG 880 Query: 503 DLLLYAQPIRN-KEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 L L+ Q + EG G + ++ + G ++P +F+PL + L + S+ Sbjct: 881 QLSLHYQSQHSLAEGTITGMESLMRWHHPELGNISPGEFIPLAEETGL--------IRSI 932 Query: 560 LKWLATHPCDK---------KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 W T + + R S+N+ L+Q+N+A I+ L + P+ + +E Sbjct: 933 TAWAITEASRQALVWEEAGIRPERISINISAAELMQQNLASEILTLIRGSGAKPEWIEIE 992 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE A + E+ + + +L + G IAIDDFGTGY++ LK+L AD +KID F++++ Sbjct: 993 ITETAAMNQPETGIGIMRELVEGGVSIAIDDFGTGYSSLAYLKQLPADHLKIDIAFIRNL 1052 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + DA+IVR+I +A A ++VVAE VETQ Q L + G +QGYL+G+P P Sbjct: 1053 PDDAEDAVIVRTIIAMAHALGMTVVAEGVETQAQLDFLRQEGCDGIQGYLLGKPLP 1108 >UniRef50_C0QQ30 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QQ30_PERMH Length = 847 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 118/461 (25%), Positives = 217/461 (47%), Gaps = 24/461 (5%) Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL- 340 L V+T+ + I+ ++S + L+ V+ ++ ++ + D +T L N + Sbjct: 390 LPEVQTDKTKVLIIDSILSTFLNLIISVKAINK---YSKEIEYYSTRDSITGLYNQKVFW 446 Query: 341 -----EQAPEQEAGKSFCCL--RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 E A G F L IDN + ++ YG ++ I + + ++ + + Sbjct: 447 ELLNYEIARADRHGYKFTLLTIDIDNFKAINDTYGYGFGDIILQKIAQIIRDTIRRGDIV 506 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRF---DGNQ 448 + G E ++L + E +I++S R G + A+ G D + Sbjct: 507 ARYGGDEFAVILPLTDAEKGYSIAKDIIDSINRFFLIATDGSKVKVSASIGMAVYPDHGK 566 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN-TIRTALDQGDLLLY 507 + L + L + + + L + +++ Q K++ LN TI A++ ++ Y Sbjct: 567 DAKDLFLFADNILHKVKMENKGSVYLPTEDDV--EQIYKKIGKLNITILNAIENKKVIPY 624 Query: 508 AQPIRN-KEGEGY-DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + KE + Y E+L R++ + + D+F+ + + + + DL ++E+ K + Sbjct: 625 FQPILDIKEDQVYIHEVLCRIENEVKTLKADEFIRVAEKMGVIHKLDLVLMENTFKKVKE 684 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + +G F +NL P ++ K I L YH++P ++ EITE + SN Sbjct: 685 E--NYEGVLF-MNLSPKAIMSKEFLESIKSLVSDYHLNPSNIVFEITERETVSNISILED 741 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L GF+ AIDDFG+G++++ +KR DI+KI+G F++ +V N D V SIT Sbjct: 742 FVMKLKDEGFKFAIDDFGSGFSSFHYIKRFPIDIVKIEGDFIRSMVKNPKDRAFVLSITT 801 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 L K + VAE+VE + + +G+ Y QGY IGRP P Sbjct: 802 LTKNLGIKTVAEYVENEVILEAVKSVGIDYAQGYYIGRPSP 842 >UniRef50_A9BVF0 Diguanylate cyclase/phosphodiesterase n=2 Tax=cellular organisms RepID=A9BVF0_DELAS Length = 573 Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 146/282 (51%), Gaps = 7/282 (2%) Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 G +E L + A+++ + + + +S + V+ Q Q +R A+ L+ Sbjct: 265 GKKEKLMAAADAAMYTAKRAGGNTYAIFKESMRQGVAAQFDLQ----QALRRAVASQQLV 320 Query: 506 LYAQP-IRNKEGEGYD-EILARLKYDG-GIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ QP I + G E LAR + G+++P F+PL +F L + V++ + Sbjct: 321 LFYQPKIDTRTGRIRSVEALARWNHPQFGLISPRVFIPLAERFGLISEIGDWVIDEACRQ 380 Query: 563 LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 A +++ R S+N+ L Q +A I R+HI P+ ++ EITE A + ++ Sbjct: 381 TAQWARERRFMRVSINISGYQLFQTRLAQFIAEAIARHHIRPEQLVFEITESVAMEDDKT 440 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 +M I +L G +I+IDDFGTGY++ L++L AD +KID FV+D+ + +V + Sbjct: 441 TMAVIAELTGMGVQISIDDFGTGYSSLALLRQLCADEVKIDRSFVRDVALKSDARAVVDA 500 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 I LA A L VVAE V QQQ+ +L LG LQG+ RP Sbjct: 501 IVRLAHALELRVVAEGVTNQQQREVLQALGCDELQGFYFARP 542 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 123/439 (28%), Positives = 205/439 (46%), Gaps = 26/439 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---EAGKSFCC-----LRIDNLEF 362 I R E RR A D LT LPN R L + EA + + + +D+ + Sbjct: 376 ISERKE-AERRIQDLAYYDELTGLPNRRQLHETLAHAFGEASRDYLIGALLFIDLDHFKT 434 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL-----SGPETEGRLQHM 417 ++ G ++ + L L+++ + L +L G E +L+L S P+ E + + Sbjct: 435 INDSLGHATGDWLLKEVASRLKRLVRQGDCLARLGGDEFVLLLPSLSASPPQAEMQADLI 494 Query: 418 VNILNSR-QIHWNNTGLDMGYGAAWG--RFDGNQETLQPLLGQLSWLAEQ--SCAHHHVL 472 L S +N+ G + GA+ G F G ++ + LL Q Q S Sbjct: 495 AERLISEIAAPYNHAGQVLHIGASVGITLFPGREQGVDDLLKQADTAMYQAKSAGRKTRR 554 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY--DEILARLKYDG 530 D+ ++ Q +++L+ N +R+AL+Q +L LY QP EG E L R + G Sbjct: 555 FFDASMQL---QADRRLLIHNELRSALNQQELTLYYQPQHMVEGGDIIGVEALIRWQPPG 611 Query: 531 -GIMTPDKFLPLIAQFNLSARFDLQVL-ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 +++P +F+P+ + +L VL E+ +++ P+ SVN+ + Sbjct: 612 RALVSPAEFIPIAEETDLIVDIGNWVLYEACAQYVRWEENGIHIPQLSVNVSAKQFHATD 671 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 RI + + P ++ LEITE +AE ++ + +L G AIDDFG GY++ Sbjct: 672 FVDRIHDVLASTGMDPASLNLEITESVVLGHAEDTISKMSELKALGISFAIDDFGAGYSS 731 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL AD +KID F++DI + + IV ++ +A+ +V AE VE++QQ L Sbjct: 732 LSYLKRLPADELKIDRSFIQDIPRDGDNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFL 791 Query: 709 HKLGVQYLQGYLIGRPQPL 727 G + QGYL +P P+ Sbjct: 792 QAQGCHFYQGYLASKPLPV 810 >UniRef50_Q3ILC0 Putative orphan protein ; putative sensory-box domain n=3 Tax=Alteromonadales RepID=Q3ILC0_PSEHT Length = 843 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 135/237 (56%), Gaps = 9/237 (3%) Query: 495 IRTALDQGDLLLYAQPI----RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 IR AL Q + L+ QPI RN+ Y E+L RLK + ++ P++F+P + N + Sbjct: 588 IRQALQQDSIELHYQPIWDFRRNEVA--YFEVLLRLKINDELVFPNQFIPSLEMLNDTFL 645 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 D V+ + + +A +P + + ++NL + L + + I +Y + P +I E Sbjct: 646 MDQCVIRNTIANVALYP---ELNQVAINLSAQSFLDERLVPLIESNLAKYQVLPTQIIFE 702 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE + +N ++ IE+L+ G +IDDFGTG++ + LK+L A +KIDG FV D+ Sbjct: 703 ITESASINNLAATRKMIEKLNILGCHFSIDDFGTGFSTFNYLKQLPAQHVKIDGSFVCDM 762 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + + +D +V++I D++ + VAE+VET++ L ++GV Y QGY I RP P+ Sbjct: 763 LNDPIDLALVKAINDISHSLDKRSVAEYVETEEVFFALKEIGVDYGQGYFIARPMPI 819 >UniRef50_C5BR51 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BR51_TERTT Length = 728 Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 120/445 (26%), Positives = 202/445 (45%), Gaps = 22/445 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--APEQE----AGKSFCC--L 355 LL + + S+ L + QA D LT L N RALE A + E GK + Sbjct: 270 TLLLVCQDISESKELAESLYYQARHDDLTGLYNRRALENFIAEKLEIMSPVGKPLALIFM 329 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS--GPETEGR 413 ID L+ ++ G IR + + + + + G EL +VLS P Sbjct: 330 DIDQLKVVNDTCGHRAGDEYIRQLVQRIGEHHGHFDFFARAGGDELAMVLSDTSPTEAVE 389 Query: 414 LQHMV-NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS---WLAEQSCAHH 469 + + NI W + N +L ++ + A+Q + Sbjct: 390 MAELARNIAEDFSFSWQDQSFRQSLSVGVALTSRNIRSLTDIMAAADAACYTAKQQGRNR 449 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI----RNKEGEGYDEILAR 525 V+ D+ E + + ++ ++L ++ ++TAL + LY QPI G + E+L R Sbjct: 450 VVVQEDTPELLDANRS--EMLWVSRLQTALMRDRFELYFQPICDLRHRHSGYIHYEVLIR 507 Query: 526 -LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLT 583 + DG TPD FLP +F L+ + DL VL + L +L HP + S+NL + Sbjct: 508 YVDDDGTHRTPDNFLPAAERFGLTNQIDLWVLTTTLDYLDRHPAHTRALSCCSINLSAHS 567 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L I +L + EITE A N + ++ + L G R A+DDFG Sbjct: 568 LASHQSRSAIKQLVMTAQFPKNKLCFEITETNAIHNLQEAVEFVNDLKILGCRFALDDFG 627 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TG++++ L+ L D IKIDG F++DI+ N + +V+++ + + ++ +AE+VE+ + Sbjct: 628 TGFSSFGYLQNLDVDYIKIDGSFIRDIINNEVGRAMVKAMNAIGRELNIGTIAEYVESDE 687 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 A L + V Y QG+ + +P P++ Sbjct: 688 IIAELIHMDVAYGQGFALAKPMPVS 712 >UniRef50_Q31DY5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DY5_THICR Length = 671 Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 120/448 (26%), Positives = 208/448 (46%), Gaps = 35/448 (7%) Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALE----QAPEQEAGKSFCCLRIDNLEF-----M 363 H+ E + + D LT L N +E +A + E + L ID +F Sbjct: 225 HKVEATTEQMRYLSEHDDLTGLYNRYYIELLIQKALQDETAQHHVLLNIDLDQFKLINDA 284 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL-SGPETEGRL--QHMVNI 420 + H + + C+ +LP ++ + ++ G + ++L + E G+ + ++ Sbjct: 285 AGHSAGDELLKMVAHSCQDMLP---DSVSMARIGGDDFYILLPNHSEKIGKAIAETLLEH 341 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL--GQLSWLAEQSCAHHHVLALDSRE 478 L+ + W + F + TL+ L+ ++ + +S + + S + Sbjct: 342 LSDFRFSWEGQAYSVSASIGMVAFKPFEYTLEELVKAADSAFYSAKSAGRNKLHIFHSED 401 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGD----------LLLYAQPI----RNKEGEGYDEILA 524 E S +V + + I+ AL QG L+AQ I N E EIL Sbjct: 402 EE-SQYYKHEVQIASYIKEALAQGASPTPSKNTAYFELFAQGITPLQHNNRDEVSYEILI 460 Query: 525 RLK-YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPL 582 RL+ G ++ PD FLP ++ + A D VL L + + P K + +NL Sbjct: 461 RLRDVKGNLIAPDAFLPTAERYQMMADIDGFVLTQYLNRVQSLPTHLTKLHKAHINLAGS 520 Query: 583 TLLQKNIAGRIIRLFKRY-HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 +L + R+ +L + H + + LEITE A N +M I+ G +A+DD Sbjct: 521 SLNNADFQARLKQLVSEHPHFPWRKLELEITETSAVGNFNQAMPFIQYCQALGIGLALDD 580 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG +++E LK L D+IKIDG FVKD+ ++ D ++R I +++ ++ VAE+VET Sbjct: 581 FGTGMSSFEYLKSLPFDVIKIDGSFVKDMHSDPSDKAVIRYIQEISALRNQETVAEYVET 640 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ +L ++G+ Y QGY +GRP+PL + Sbjct: 641 QEDVDVLTEIGITYGQGYFLGRPKPLTE 668 >UniRef50_Q5ZVC2 Sensory box protein/GGDEF domain/EAL domain n=6 Tax=Legionella pneumophila RepID=Q5ZVC2_LEGPH Length = 849 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 107/420 (25%), Positives = 195/420 (46%), Gaps = 23/420 (5%) Query: 325 QALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 Q+ D LT LPN A++ A + L +D ++ +G I Sbjct: 426 QSTHDMLTNLPNKVLAINMLGYAMKTAVSSKKIVGVYLLDLDRFTQINDVFGHSKGDEII 485 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--RQIHWNNTGLD 434 ++I + L+ + N L +L G + +++ S ++ + + +L++ + N + Sbjct: 486 KAISKRLIDCVPMNHMLGRLSGDQFIVIASINNSKEVVTGVTRLLSAFHEPVKMNGHSIK 545 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS----REEMVSGQTTKQVL 490 M + + T+ LL + A+ + + V +S +EM S T + +L Sbjct: 546 MSCSVGISFYPKDGNTVDTLLSK----ADIALSRTKVEGRNSFQFYTQEMHS-YTLEHIL 600 Query: 491 LLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L + ++ A+ + + +LY QPI G++ ++ G++ PDKF+PL + + Sbjct: 601 LESELKNAVAKNEFVLYYQPILKLSSLNVIGFEALIRWNHPRNGLILPDKFIPLAEEIGI 660 Query: 548 SARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 V ++ K + K + S+N+ P + I RI L + + ++ Sbjct: 661 IGEIGDWVFVTVCKQIQAWQLQGFKNIKISINISPKQFKFQYIPKRINELLSEFQVKSES 720 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LE+TE + + + +L + G +I+IDDFGTGY+ LK L DI+KID F Sbjct: 721 IELELTENILIDKSTDIIDTLSKLKEMGIQISIDDFGTGYSCLSYLKDLPIDILKIDQTF 780 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 VKD+ N + ++++I +AK +LS++AE +E Q Q L KLG Y QGY P+P Sbjct: 781 VKDLKNNQSNQTLIKAIIAMAKKFNLSLIAEGIENQYQLEFLKKLGCHYGQGYYFSHPKP 840 >UniRef50_Q15QF9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QF9_PSEA6 Length = 666 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 115/422 (27%), Positives = 198/422 (46%), Gaps = 25/422 (5%) Query: 325 QALTDPLTLLPNFRALEQA-----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 QA DPLT L N RA E+ ++ C + +D + ++ G + + Sbjct: 250 QASHDPLTELQNRRAFERNLHEIMDDRRLSYFLCFIDLDYFKTINDTCGHAAGDEILVKV 309 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL-NSRQIHWNNTGLDMGYG 438 R L ++ N+ + +L G E +++ + LQ NI N R + ++ G Sbjct: 310 ARILKANVRSNDIVARLGGDEFSILIKDCPFDNALQIANNIKENIRGLTYHWEGETFHLS 369 Query: 439 AAWG---RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ-VLLLNT 494 A+ G + G+ T ++ ++ + V D E +G +Q +L ++ Sbjct: 370 ASIGVAPKVHGSTTTELLNSADVACGIAKNAGRNTVHLYDVSNE--TGVNKRQDILSVHQ 427 Query: 495 IRTALDQGDLLLYAQ---PIRNKEGEGYDEILARLKY-DGGIMTPDKFLPLIAQFNLSAR 550 I AL +LY Q P+++ + + + E+L R+K D I++P +F P+ ++ L+++ Sbjct: 428 INNALKNDLFVLYRQDIIPLQHTQQDQHFEVLLRMKGPDDTIISPARFFPIAERYRLTSK 487 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF-----KRYHISPQ 605 D V+ +L TH D K S++ + + L ++ R + F K I Sbjct: 488 IDRWVINALF----THYADNKKQLDSIHTISINLSGHSMNDRELEQFIMTKVKSGLIPAT 543 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + EITE A +N + + ++ + G A+DDFG+G+ +Y ++ L + IKIDG Sbjct: 544 KICFEITETVAITNVKRARLFMDNIKALGCSFALDDFGSGHTSYTYVRELPTEKIKIDGS 603 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV ++ N LD V+SI D+AKA V+AE VE ++ L KLGV Y QGY P Sbjct: 604 FVSCMMENPLDYTAVKSICDIAKAAKQDVIAECVEDKKTMEALKKLGVDYGQGYYFCHPY 663 Query: 726 PL 727 L Sbjct: 664 AL 665 >UniRef50_A4BFV7 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Reinekea blandensis MED297 RepID=A4BFV7_9GAMM Length = 814 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 119/417 (28%), Positives = 193/417 (46%), Gaps = 27/417 (6%) Query: 329 DPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHY---GLMMRVH-------CIRS 378 D LT LPN + ++ E + C R +NL ++ G + VH +R Sbjct: 391 DALTGLPNRQLFQEQLHHELHR--CRRREENLAVVALEVSGIGQINSVHGDAFSDQLLRR 448 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL----QHMVNILNSR-QIHWNNTGL 433 I L ++E + L + E L+V+S +T L + ++ + ++R QI + L Sbjct: 449 IAGELTKALREEDSLCRYSNDEFLMVISDFQTPEALHALAKRLIKLASTRYQIDDHYVAL 508 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA---LDSREEMVSGQTTKQVL 490 G A D E G L A + H LD E + + ++ Sbjct: 509 YANVGIATFPSDARDE------GSLITCAITAMRHARQTGRNTLDYFSEESARRAQEKWH 562 Query: 491 LLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 L + AL D L+ QPI + + A L++ + PD+F+P+ + L Sbjct: 563 LERQMTEALAAHDFQLHYQPIFDLDSNRCIAAEALLRWPSTQLAPDQFIPVAEETGLIHP 622 Query: 551 FDLQVLESLLK-WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 +L + ++ W H ++ SVN+ L L Q + I L K+YH+ P ++L Sbjct: 623 MGNWILSTAVRQWAQWHDEGRELTYLSVNISVLQLQQPGFIDQAISLTKQYHLPPGRLVL 682 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE + + + I +L + G+R+AIDDFGTG+++ LK+L D +K+D FV+ Sbjct: 683 EITESILLQTSPNVLSQINRLRQAGYRLAIDDFGTGFSSLNYLKQLPIDYLKVDRSFVEG 742 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 I+ N D+ I R+I D+A A + +VAE VET QQ L + GV + QGY + P Sbjct: 743 IIENNQDSAIYRAIVDMAMAMDIEIVAEGVETPQQMLWLKQQGVTFAQGYFYTQALP 799 >UniRef50_Q1MXL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Bermanella marisrubri RepID=Q1MXL3_9GAMM Length = 561 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 125/453 (27%), Positives = 201/453 (44%), Gaps = 29/453 (6%) Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA----PEQ 346 LA+ L++L C LY+ I R + + H QA D T L N R E EQ Sbjct: 110 LAYNLSLLPDLGSCHLYIEDITERKQ-AEEQLHYQAYHDIHTGLANRRQFELDLGLIIEQ 168 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL------YQLPGSE 400 + S + ID +F++ G + I+ R L+ E E+L Y+L GS Sbjct: 169 KLPISVMFIAIDRFKFITASQGYFIGDQIIKEFGRRLV---HECEQLDFEALSYRLDGST 225 Query: 401 LLLVLSGPETEGRLQHMVNILNSRQI------HWNNTGLDMGYGAAWGRFDGNQETLQPL 454 ++++ P+++ I NS H L MG+ F N + L Sbjct: 226 FCVLVNSPKSQHAWDTSHAIQNSMDAPLQVGEHRYYLTLSMGFC----HFPENGRDAKAL 281 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 + + + +A S E Q + + IR AL+ L+ Q + Sbjct: 282 ITNGNAALNSAKLKGDNIAQYS--EQHHAQEQSWLPIEEKIRKALEWDQFELHYQAKVDG 339 Query: 515 EGEGYD--EILARLK-YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 + E L RLK +G ++P +F+P+ Q L + V+E + Sbjct: 340 QDHSIKGAEALIRLKDENGNHISPGRFIPVAEQTGLIIKIGQWVIEKGFRQAKAWDDQGD 399 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 + ++N+ +N + + ++P + LEITE NAE S++ ++QL Sbjct: 400 KIKLAINISARQFQDRNFLIHLQQQLSETQVNPALIELEITESLLMDNAEQSIFIMKQLK 459 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 GF +AIDDFGTGY++ LKR D +K+D FV+++ T+ D IVR+I L + + Sbjct: 460 AMGFALAIDDFGTGYSSLAYLKRFPIDTLKVDQAFVRNLETDKDDQNIVRAIVSLGQHLN 519 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 L +VAE VET Q + L+ L V Y+QG+L +P Sbjct: 520 LEIVAEGVETSGQLSFLNTLNVNYIQGFLFSKP 552 >UniRef50_A1U0A2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gammaproteobacteria RepID=A1U0A2_MARAV Length = 575 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 112/417 (26%), Positives = 194/417 (46%), Gaps = 24/417 (5%) Query: 329 DPLTLLPNFRALEQAPEQEAGKSFCCLR--------IDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN R +E E ++ C R +DN + ++ G ++S+ Sbjct: 149 DDLTGLPNRRLMESELESRLAEADRCNREVAVIFMDLDNFKLINDTLGHYQGDSLLKSVA 208 Query: 381 RTLLPLMQENEKLYQLPGSELLLVL---SGPET-EGRLQHMVNILNSR-QIHWNNTGLDM 435 TL ++ ++ L + G E +L+L GPE LQ +V L S+ Q+H + + Sbjct: 209 DTLKQELRHSDLLCRFGGDEFVLLLFDFHGPEGIHELLQRLVKALESKVQLHGDCYQVSA 268 Query: 436 GYGAAWGRFDGNQETLQPLLG--QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 +G + + N T L+G + + + V S ++ + K + Sbjct: 269 SFGVSL--YPHNGGTAAELMGNADAAMYRAKEIGKNTVCFYTSD---INDRLVKYQQITA 323 Query: 494 TIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R AL G L LY QP +R + +L +++P F+P+ + L R Sbjct: 324 LLRQALTNGGLELYYQPQIDLRTGGATSCEALLRCFDKASNLVSPATFIPVAEKSGLINR 383 Query: 551 FDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 V+++ K L + G R VNL L ++A +I+ + Y + P+ + + Sbjct: 384 IGDWVIDAACKQLKAWQRTELAGVRIDVNLSGRQLTNPHLADQILETIEHYGLKPEQLGV 443 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE + F + E +E+L G I+IDDFGTGY++ L++L IKID F+ Sbjct: 444 ELTENEVFGSEEDQTRQLERLKAAGLHISIDDFGTGYSSLVYLRKLPVCSIKIDRSFLHY 503 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + N D I++++ + ++ LS++ E VET+QQ L+ LG + QG+L +P P Sbjct: 504 AMENESDMAIMKAMVTVGQSLGLSILVEGVETEQQAKLIRDLGCDFAQGFLYAKPMP 560 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/253 (35%), Positives = 134/253 (52%), Gaps = 8/253 (3%) Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE-GYDEILARLKYD-GGIMTPDKF 538 + Q T + L + +R + + +L ++ QPI + E L R ++ G+++P F Sbjct: 844 MQAQVTARSQLESDLRQGIARHELTVHLQPIVDGSTRLCGAEALVRWRHPVKGLISPADF 903 Query: 539 LPLIAQFNLSARFDLQVL----ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 +PL + L QVL E L++W ATHP +VN+ Q + ++ Sbjct: 904 IPLAEETGLILPLGRQVLQTACEQLVRW-ATHPATASFT-IAVNVSARQFRQPDFVAEVL 961 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +PQ + LE+TE + E ++ + QL + G A+DDFGTGY++ LKR Sbjct: 962 GTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYLKR 1021 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D++KID FV+D++T+ DA IVR+I LAK+ L VVAE VET Q + L G + Sbjct: 1022 LPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGCE 1081 Query: 715 YLQGYLIGRPQPL 727 QGYL GRP PL Sbjct: 1082 GFQGYLFGRPVPL 1094 >UniRef50_C0EE41 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE41_9CLOT Length = 606 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 115/467 (24%), Positives = 213/467 (45%), Gaps = 36/467 (7%) Query: 287 TEYSLAF--ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 +EY L F +L L++F V M ++ LNR + TDPLT + N A Sbjct: 144 SEYKLTFSLLLTALLTFVVFYGLMHLNKRQNAKLNRLLY----TDPLTGIANQSAF---- 195 Query: 345 EQEAGKSFCCLR-------------IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 A ++ LR I+N ++++ YG +++I + + ++E Sbjct: 196 ---ADRALYLLRDNPSISYALVYFDINNFKYVNDAYGYETGDALLQAIAQYFDRHLSKSE 252 Query: 392 KLYQLPGSEL-LLVLSGPETEGRLQHMVNILNSRQIHWN---NTGLDMGYGAAWGRFDGN 447 ++ LL +G E + L + + + + N + Y + + Sbjct: 253 LCARINADHFALLTFNGEERDISLTKRIRVCIDQAVSDGIELNIADSLSYSFGIYQIVDH 312 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E + ++ + + +Q+ H + + S + + + ++ + +++AL + L+Y Sbjct: 313 AEPVNSMMDKANIALKQAKNHEEMRTV-SYNDALFAKLQRERQIEARMQSALQNAEFLVY 371 Query: 508 AQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP I G + ++ + + G + PD+F+PL + A+ D VL+ + + + Sbjct: 372 LQPKVEISTNTMIGAESLVRWVSPEFGFLPPDEFIPLFEKNGFIAQLDFYVLDRVCRKMR 431 Query: 565 THPCDKKGPRFSV--NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 D+ FS+ NL +TL Q + R R+ +RY + P + LE+TE N E Sbjct: 432 QVIDDRLSDSFSISINLSRVTLYQDDFFERFTRIVERYKMPPSRIELEVTESAFIGNQEG 491 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + +E+L GF IA+DDFG+GY++ LK L D++KID F+++ I++ Sbjct: 492 ILSVLERLKGMGFLIAMDDFGSGYSSLNLLKLLPIDVLKIDKQFLRESSKGDRSYRIIKC 551 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + ++AKA VV E VET++Q L ++ QGY RP +AD Sbjct: 552 VIEMAKALDAQVVCEGVETKEQVDFLAQINCDIGQGYYFARPMAIAD 598 >UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC21_CELJU Length = 1306 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 111/432 (25%), Positives = 193/432 (44%), Gaps = 40/432 (9%) Query: 326 ALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN R L Q+ + + +D+ + ++ G + + Sbjct: 865 AFFDPLTRLPNRRMLMDRLRLIIAQSARTSQQGALLFIDLDHFKLLNDTRGHHIGDQLLV 924 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETE------------GRLQHMVNILNSRQ 425 + + +++ + +L G E ++V T+ +L ++N+ Q Sbjct: 925 QVAERISSIIRTTDLAARLGGDEFVVVFDNLGTDPDKAALEAKHRAEQLHELINLPYPLQ 984 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLL--GQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + +G F+ N ++ LL ++ + + + D + Sbjct: 985 QSVYHCTISIGVNL----FNANNTSIDDLLRHADVAMYQAKDGGRNTIRFFDPH---MQS 1037 Query: 484 QTTKQVLLLNTIRTALDQG-DLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLP 540 + K+ + +R+A + G L Y Q N GE G + +L + G + P F+P Sbjct: 1038 RLEKRAEIEADLRSAHESGTQLTPYYQAQVNHTGEVLGAELLLRWIHPRKGTIAPGDFIP 1097 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-----SVNLMPLTLLQKNIAGRIIR 595 + Q L QV+ K L C ++ P F +VN+ P+ Q + +I Sbjct: 1098 VAEQTGLIVAIGRQVIRMACKQLQ---CWQQQPGFGHLTLAVNVSPIQFNQSSFVEDVIS 1154 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 Y ++P + LE+TE N E S+ +++L +FG A+DDFG GY++ LK+L Sbjct: 1155 CVLDYDVNPNHLKLELTESSLLKNVEHSIEKMQRLQEFGISFAMDDFGIGYSSLSYLKKL 1214 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV+DI + DA+IVR+I +A +L+V+AE VET+ Q+ L + G Sbjct: 1215 PLDQLKIDRTFVRDITIDPNDAIIVRTIIAMAANMNLNVIAEGVETELQKQFLEQNGCLL 1274 Query: 716 LQGYLIGRPQPL 727 QGY G+P PL Sbjct: 1275 FQGYYFGKPMPL 1286 >UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria RepID=A6SW06_JANMA Length = 459 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 8/241 (3%) Query: 495 IRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 +R AL L+LY QP +G G + +L G+++P F+PL Q L Sbjct: 192 LRKALQDNQLMLYYQPQTGNDGRIVGAEALLRWRHPVKGMVSPADFIPLAEQTGLILPIG 251 Query: 553 LQVL----ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VL L+ W + HP + ++N+ L Q + +++ + R P + Sbjct: 252 HWVLGMACAQLISW-SKHPATAQ-LSLAINVSALQFKQPDFVSQVVSVLDRSGADPHLLE 309 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LE+TE ++ + + L + G R+++DDFGTGY++ LK+L D +KID FV+ Sbjct: 310 LELTESMLVNDVNDIIAKMNALKEKGLRLSLDDFGTGYSSLSYLKKLPLDQLKIDQSFVR 369 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D++ ++ D IVR++ +LA+ L V+AE VETQ+Q+ L +LG QGYL+ RP P A Sbjct: 370 DMLFDSNDVTIVRTVVELARGMGLHVIAEGVETQEQRQFLAELGCLSFQGYLLSRPVPNA 429 Query: 729 D 729 + Sbjct: 430 E 430 >UniRef50_C8QGW8 Diguanylate cyclase/phosphodiesterase withMHYT sensor n=1 Tax=Pantoea sp. At-9b RepID=C8QGW8_9ENTR Length = 699 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 87/261 (33%), Positives = 139/261 (53%), Gaps = 20/261 (7%) Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMT 534 E +S Q+ L N + AL+ ++ L+ QP G G++ +L G++ Sbjct: 420 EPAMSTVAQHQLALANDLWHALEHQEMRLFYQPKFRAGGTLLMGFEALLRWQHPRRGLLM 479 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC------DKKGPR---FSVNLMPLTLL 585 PD FLP A Q++ +L W+ C ++G SVNL L Sbjct: 480 PDMFLP-------RAEKTGQII-ALGNWVINEACRQLRQWHEEGNSHWSVSVNLSALQFH 531 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q+++ + + +R+ + A++LEITE A + + S I +LH+ G ++AID+FG G Sbjct: 532 QRDLIDSLREILQRHSLPEGALMLEITETIAMRDPQFSQQRIAELHQLGVKVAIDNFGIG 591 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 YAN LK L+A +KID F+ + ++ DA +V ++ LA++ +L +VAE VET++QQ Sbjct: 592 YANLLHLKHLEATELKIDRSFINSLRADSEDATVVSAMITLAQSLNLRMVAEGVETEEQQ 651 Query: 706 ALLHKLGVQYLQGYLIGRPQP 726 LL LG LQGYL+G+P P Sbjct: 652 RLLTGLGFDTLQGYLLGKPTP 672 >UniRef50_D0L072 Diguanylate cyclase/phosphodiesterase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L072_HALNC Length = 737 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 140/495 (28%), Positives = 214/495 (43%), Gaps = 54/495 (10%) Query: 266 TWAVSTLCLLN-YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHL 324 TW + + LL+ YN + L G + +L FI A+L S MV+ Y SE + Sbjct: 260 TWFNAHINLLHGYNASMLLG---DQALIFIAALLAVIST---EMVQAYRLSE---KSLAR 310 Query: 325 QALTDPLTLLPNFRALEQA----PEQEAGKS----FCCLRIDNLEFMSRHYGLMMRVHCI 376 Q L DPLT L N L Q P+ G + I LE + G H Sbjct: 311 QLLIDPLTGLQNDMGLSQRLQAWPKDRTGAMQPMIVIGVHIPELEQIDALMG-----HEE 365 Query: 377 RSICRTLLPLMQENEKLYQL-----PGSELLLVLSGPETEGRLQHMVNILNSR-QIHWNN 430 + L + EKL PG +L L+ R + L R + W Sbjct: 366 SNQVELRLSQILRKEKLSDYASRVRPGV-FILCLTSAVMGMRGADVAQKLKDRIEFEWKK 424 Query: 431 TGLDMGY-GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 G Y A + F+ Q LG L+ C L+L R ++V + Sbjct: 425 MGAGARYLQAGFTVFNLAQTRD---LGLLTSAVLAGCQ----LSLADRNQLVHVEDNLDS 477 Query: 490 LL---------LNTIRTAL----DQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIM 533 LL + +R AL G +L+AQ IR+ + + ++ +L D ++ Sbjct: 478 LLSHRVQELTWVQRMRAALVGDTQAGQFILFAQTIRDTRHPDVKAFEVLLRWQDADENVL 537 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 P +FLP+ ++ L DL V+ S L+ LA P + + S+NL +L N+ I Sbjct: 538 PPSEFLPIAERYGLMTAIDLWVMRSALEQLAQSPWRAEISKVSINLSGASLADPNLIHEI 597 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + K + + EITE ++ + + + + + G +I++DDFGTG + + LK Sbjct: 598 EQQLKSCGCRAEQICFEITETMVIADTKLARQAVLGIKELGCKISLDDFGTGLSTFSYLK 657 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D +KIDG FV+ I + +D IV SI +A + VAEFVE Q L ++GV Sbjct: 658 RFPFDYLKIDGEFVRHITESRIDRAIVESIQAIAFEMNTITVAEFVENIDQMETLRQIGV 717 Query: 714 QYLQGYLIGRPQPLA 728 Y QGY + +P P+A Sbjct: 718 YYHQGYGVAKPVPIA 732 >UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3J9L4_NITOC Length = 811 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 116/463 (25%), Positives = 207/463 (44%), Gaps = 25/463 (5%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYH---RSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 EY++ A + S + +L +V ++ + + R+ QA D LT L N R E Sbjct: 346 EYAIQDSAAPISSRTGEVLGVVLVFSDVTEARHMTRQITHQATHDSLTGLVNRREFEHRL 405 Query: 345 E--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 E + A + C +D + ++ G + +R + L +++ + L +L Sbjct: 406 ERVLATLKAESAEYALCYFDLDRFKVINDTCGHVAGDELLRQVSEVLRGQIRKRDTLARL 465 Query: 397 PGSELLLVL---SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E ++L S + + + + Q W +G + Sbjct: 466 GGDEFGVLLEHCSLKQAQRVATAIHKAIEDFQFTWEGKSFRIGVSIGLVPITKASMGIAV 525 Query: 454 LLGQLS---WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 +L + A+ + + ++ +E+ S + +V + I AL + +Y QP Sbjct: 526 VLKAADTACYAAKNKGRNRIHVYHETDKELASHRG--EVQWMTRIHRALKENYFQVYFQP 583 Query: 511 I----RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 I KE + Y+ L GG++ P FLP ++NL+ + D ++ + WLA + Sbjct: 584 IIPLATEKEEKCYEVFLRLEDGAGGVVLPGAFLPTAERYNLAVKIDRWMIANTFTWLAQN 643 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 P + +NL +L K II ++ I + EITE A +N ++ Sbjct: 644 PEPLR--TCFINLSGHSLRNKTFLAFIIEQLEKTPIPSIQICFEITEAAATANLSCTIRF 701 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 I+ L G + ++DDFG+ +++ LK L D +KIDG+FVKDI+ + +D IVRSI ++ Sbjct: 702 IKSLKSHGCKFSLDDFGSSLSSFAYLKNLPVDFLKIDGLFVKDILDDPIDLAIVRSINEI 761 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +AE+VE ++ L ++GV Y QGY I PQPL + Sbjct: 762 GQIMKKQTIAEWVEKEEVLEKLREIGVNYAQGYWINPPQPLTE 804 >UniRef50_B0TL03 Diguanylate cyclase/phosphodiesterase n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TL03_SHEHH Length = 574 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/261 (33%), Positives = 143/261 (54%), Gaps = 13/261 (4%) Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARL 526 HV+ L++ E + ++V L + AL ++YAQ I E + E+L RL Sbjct: 290 HVINLENGE---LEEHIREVEWLGKLNWALASNQFVIYAQKICAIGGGEESSHFEVLIRL 346 Query: 527 K-YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 K DG I++P F+P +++L D VL++ + T C+ +S+NL TL Sbjct: 347 KDEDGMIISPGVFIPPAERYDLMPDIDRWVLKATFSKI-TPSCN-----YSINLSGQTLS 400 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 ++ I L Y+++P+ + EITE A + ++ I L + GF ++DDFG+G Sbjct: 401 DDSLINYIENLLDTYNVNPKQICFEITETAAIQELDKTVALISCLKQKGFCFSLDDFGSG 460 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 +++ LK+L + +KIDG FVKDI T+++ +V+SI ++ L +AEFVE++ Sbjct: 461 LSSFSYLKKLPVNYLKIDGDFVKDIATDSVSYAMVKSINEVGHTMGLKTIAEFVESEAIL 520 Query: 706 ALLHKLGVQYLQGYLIGRPQP 726 A L ++GV Y+QGY I PQP Sbjct: 521 AKLTEIGVDYVQGYYIHEPQP 541 >UniRef50_B6BLQ9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BLQ9_9PROT Length = 780 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 110/447 (24%), Positives = 210/447 (46%), Gaps = 30/447 (6%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHL--QALTDPLTLLPNFRALEQAPEQEAGKS 351 I+ VL + + Y+ Y +E + +R L Q TD LT L N L E + Sbjct: 340 IIPVLDTNGEIVEYIASRYDITELVEKRKTLEKQYKTDRLTTLGNRFKLLNDIETIDSAA 399 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN-EKLYQLPGSELLLVLSGPET 410 + ID+ + ++ YG + H I + + LL L + ++Y+L + + + T Sbjct: 400 LAIIDIDSFKEINDFYGHEIGDHVIIELSKRLLELTNDRFAEVYRLQADQFAFLCTECTT 459 Query: 411 ----EGRLQHMVNILNSRQIHWNNTG--LDMGYGAAWGRFD--GNQETLQPLLGQLSWLA 462 E ++ +V+ L + I++ L + G A+ + D N + + Q + Sbjct: 460 KDKFENTIKKLVDKLTNNPIYFQQHEILLRVTIGIAFEKKDLFINADIALKIAKQEN--- 516 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGY 519 + S + ++ Q + ++ ALD+ ++ + QPI NK+ E + Sbjct: 517 KNSVTYEKTFNIEE-------QYKNNLEWTKKVKKALDEDRIVAFFQPIYNQHNKKIEKF 569 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + ++ + D +++P FL + + L ++ + +++ ++ +H + FS+NL Sbjct: 570 EALVRMIDTDDKVISPFFFLEIAKKAKLYSKITMIMIDKAIEAAKSHDYE-----FSINL 624 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 ++ K++A + K +I + +++E+ E + N + IEQ + G ++AI Sbjct: 625 TIDDVVNKDVATYFLENIKTNNIGHK-IVIELVESEGIENFDEFYSFIEQAKQLGCKLAI 683 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY+N+E L +L D IKIDG VKDI + ++ +I AK ++ +AEFV Sbjct: 684 DDFGTGYSNFEYLLKLDVDYIKIDGSLVKDIDKDKNMRLVAENIISFAKIANMQTIAEFV 743 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQP 726 ++ ++ +GV Y QGY G P P Sbjct: 744 SHKEIADIVSAIGVDYSQGYYFGEPVP 770 >UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5V4_NITSB Length = 793 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 138/258 (53%), Gaps = 9/258 (3%) Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMT 534 +E + + ++V L ++ A+++ +L+LY QP +R K+ EG++ ++ G + Sbjct: 531 QENMQQEALEKVTLKQELKKAIEKNELMLYLQPKISVRTKKVEGFEALIRWNHPTRGFIP 590 Query: 535 PDKFLPLIAQFNLS---ARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 P KF+PL + L + Q ++ LL L + + P ++N+ + Sbjct: 591 PSKFIPLAEESALIIPLTEWIFQEVDRLLDQLQQNGIE--SP-IAINISARHFATDKLIE 647 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 +I K+ +I + LE+TE + +M+ +++LH FG ++A+DDFGTG+++ + Sbjct: 648 QITTNIKKEYIQKGLIELEVTESAVMEDINKAMHYLQKLHSFGIKVALDDFGTGHSSLQY 707 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK+L D IKID F+ I+ + D IV S ++A + VAE VET++Q L K+ Sbjct: 708 LKKLPIDTIKIDKTFIDHIINDNKDQAIVESTIEMADKLGMDTVAEGVETKEQAQFLEKI 767 Query: 712 GVQYLQGYLIGRPQPLAD 729 G+ Y+QGY +P P + Sbjct: 768 GIDYIQGYYYAKPMPFEE 785 >UniRef50_Q1YVI9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVI9_9GAMM Length = 857 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 132/471 (28%), Positives = 204/471 (43%), Gaps = 53/471 (11%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL----EQAPE-- 345 AF L + V L + R+ + ++ R Q++ D LT LPN +L ++A E Sbjct: 400 AFPLRDAMGRIVKCLVIFRLLSEARRVSSRLQWQSMHDSLTGLPNRASLSKHIQKAVEIA 459 Query: 346 QEAGKSFCCLRID--NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + G + L ID N ++ G ++ + L+ L ++ ++ E L Sbjct: 460 RHEGATHALLYIDLYNFSVINDTSGHTAGDELLKEFAQLLIRLAGPSDITARIGNDEFAL 519 Query: 404 VLSGPETEGRLQHMVNILNSR-------------QIHWNNTGLDMGYGAAWGRFDGNQET 450 ++ H VN SR ++ W L +G A+ G + Sbjct: 520 LI----------HRVNYDKSRMLAERILAEVKELRVPWEGEVLKIG--ASIGAILIDNTA 567 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL--------LNTIRTALDQG 502 L + L A SCA A D + Q+ + + + I +ALD+ Sbjct: 568 LSDI--DLMISAGSSCA----TARDKGRNKIHFQSFNEEVARRRSLATSMPKIVSALDED 621 Query: 503 DLLLYAQPIRNKEGEGYD----EILARLK-YDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 L+AQPI +G E+L R++ DG I+ P +F+P F+L D V Sbjct: 622 RFTLFAQPIVPLQGSATTAKCYEVLVRMRESDGTILPPSEFIPGAEHFSLIDDLDKWVFS 681 Query: 558 SLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 LK+L P SVNL T+ +N I+R F ISP+ EITE A Sbjct: 682 HSLKFLQRLQAQGSALPLLSVNLSGTTVGDENAIDYILRGFSDTGISPKQFQFEITETAA 741 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + + + I L G IA+DDFG+G +++ LK L D +KID F+ + + +D Sbjct: 742 VKHLQEAKRLISTLRSVGVSIALDDFGSGLSSFAYLKELPIDCLKIDSSFIHTMENSDVD 801 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +V +I L ++ VAE VE + Q LL K+GV YLQG+L PQPL Sbjct: 802 YSVVSTINHLGHIMGVTTVAEGVENENQLRLLKKIGVDYLQGFLFQHPQPL 852 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 117/425 (27%), Positives = 188/425 (44%), Gaps = 27/425 (6%) Query: 329 DPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN A+ + A L ID+ + ++ G + +R + Sbjct: 577 DTLTGLPNRSLMWDRLRHAIAASARSGASGMLMLLDIDHFKLLNDTQGHEVGDALLREVA 636 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSG-----PETEGRLQHMVNILNSRQIHWNNTGLDM 435 + L ++E + + ++ + +V+ E GR + + L+ GL Sbjct: 637 QRLRGALREEDTVARVGDDDFAIVVENLGADRDEAIGRAEKIAEHLHRCVTAPCELGLAS 696 Query: 436 G---YGAAWGR--FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 G GA+ G F G +L Q ++ L E M + + L Sbjct: 697 GPYHVGASLGLTLFRGRNAAADAVLKQAEVAVARAKDDGRNLIRFFSEAMQAVVAARAEL 756 Query: 491 LLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 L +R AL LY QP ++ G G + ++ +G +++P F+PL + L Sbjct: 757 ELK-LRAALACNGFRLYYQPQLDRNGRVIGAEALIRCFDAEGEMISPAAFIPLAEETGLI 815 Query: 549 ARFDLQVLES----LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 VLE+ L W T G S+N+ Q + G++ +R+ I P Sbjct: 816 VPIGEWVLETACAQLRAWQRTPST--AGLSLSINVSARQFHQPDFVGKVAAAIERHRIRP 873 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + +E+TE + E+++ + Q+ G R A+DDFGTGY++ LKRL D +KID Sbjct: 874 GGLEIELTESVVIGDIETTVLRMRQIKALGVRFALDDFGTGYSSLSYLKRLPFDQLKIDQ 933 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +FV+D+ +T IVR+I L+++ L VVAE VET Q LL G + QGYL GRP Sbjct: 934 MFVRDMEKDTSSEAIVRAILALSRSLDLKVVAEGVETAAQHELLLTRGCELFQGYLFGRP 993 Query: 725 QPLAD 729 P+ D Sbjct: 994 VPIED 998 >UniRef50_Q30TM0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30TM0_SULDN Length = 656 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/443 (26%), Positives = 199/443 (44%), Gaps = 44/443 (9%) Query: 307 YMVRIYHR-SEWLNRRWHLQALT-------DPLTLLPNFRALEQAPE---QEAGKSFCCL 355 Y++R + +E L ++ + L D LT LPN L + E + + + Sbjct: 223 YLIRFSKKVNETLEKKIEQKTLEFKSSLFQDRLTKLPNRLKLIEDIELSMDKKHRHLALV 282 Query: 356 RIDNLEFMSRHYG-------LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 ID + ++ YG L+ IR+ C L + Y+LP E + ++ Sbjct: 283 NIDAFKDINDLYGYAIGDEILIQVSQRIRNFCTDLGSI-------YKLPNDEFAIFVTDK 335 Query: 409 ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD-GNQETLQPLL--GQLSWLAEQS 465 E + L N T + + + F G PLL + A +S Sbjct: 336 FDEDNFHKTIKTLLET---INETKFSIDEQSIFISFSCGISSNKDPLLIKANTALQAAKS 392 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEI 522 A V+ DS Q TK + L ++ A+ + + Y QPI R+K+ E Y E Sbjct: 393 TAKSVVIYKDSLN--AKEQITKNMDALLILKEAIAKNQITPYFQPIYNTRSKKIEKY-EA 449 Query: 523 LARL-KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 LAR+ + DG ++ P FL + + L ++ ++ K FS+NL Sbjct: 450 LARIVREDGSVIAPFAFLDIAIKSKLYPEITKAMILKSFEFFKD-----KEYEFSINLSI 504 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + + + I+ + + PQ V+ EI E N + I+++ K+G +IAIDD Sbjct: 505 LDIQNQEVLKFILSKLREFP-EPQRVVFEILESHKIENYQEMKSFIKEVKKYGSKIAIDD 563 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FG+GY+N+ ++ L D +KID VK I T+ +I+++I + A L +AEFVE Sbjct: 564 FGSGYSNFSQVFELNVDCLKIDASLVKYITTDESSRVIIKTIVNFASNLGLKTIAEFVED 623 Query: 702 QQQQALLHKLGVQYLQGYLIGRP 724 ++ +L K+G+ ++QGY IG+P Sbjct: 624 RESLEILEKMGIDFIQGYYIGKP 646 >UniRef50_C0QQF8 Ggdef family protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QQF8_PERMH Length = 656 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 107/427 (25%), Positives = 192/427 (44%), Gaps = 38/427 (8%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 E LNR+ Q TD LT LPN L + + + I++ + ++ YG + Sbjct: 248 ENLNRKLEKQLFTDSLTSLPNRLKLIEDIKGSSDPKLAIFNINSFKEINDFYGQEIGDEL 307 Query: 376 IRSICRTLLPLMQENE-KLYQLPGSELLLVLSGPETEGRLQHMVN-----------ILNS 423 ++ + R + + ++ +Y+L G E ++ T + + + I Sbjct: 308 LKKVGRKINSYVDKDRYTVYKLSGDEFAILSDRDITMDQFSNTIQRIIENIHEEIFICGE 367 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 +IH T GY + R L+ + + + H + L S+ + Sbjct: 368 TEIHIYMTA---GYASGKER----------LISRADMALKYAKQHKKSIQLYSKNLGIEK 414 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPI-RNKEG--EGYDEILARLK-YDGGIMTPDKFL 539 Q + ++ I+ AL + + ++ QP+ N+ G E Y E L RLK DG + P+ F Sbjct: 415 QYIHNITVMKKIKEALRKNMVTVHFQPVYNNRTGLVESY-ETLVRLKDTDGSEILPETFF 473 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + + +++E++ K + P +FS+NL + + + RI K Sbjct: 474 DIAKKSPVYPEITAKIIETIFKKIKDIPH-----KFSLNLSVRDIENRELTERIFEFLKS 528 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 Y +I EI E ++ N + I+++ K G +IAIDDFG+GY+N+E + +L D Sbjct: 529 YR---NDIIFEILESESIRNYRTVSQFIKEVKKLGAQIAIDDFGSGYSNFEFILKLDVDY 585 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 IK+D +KDI N +IV +I AK VAE V +++ ++ +L V + QG+ Sbjct: 586 IKLDSSLIKDIDRNINSQIIVETIVGFAKRLGKKTVAEHVHSEEVFEVVKELDVDFSQGF 645 Query: 720 LIGRPQP 726 G+P P Sbjct: 646 YFGKPSP 652 >UniRef50_D1B111 PAS sensor protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B111_SULD5 Length = 647 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 130/244 (53%), Gaps = 7/244 (2%) Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIA 543 K + L I+TA+++ ++L Y QPI N + E Y+ ++ L +G ++ P FL + Sbjct: 408 KNIETLYMIKTAIERQNILSYFQPIVNNQTQQIEKYESLVRLLNEEGDVLAPHAFLDIAK 467 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 + S + VLE+ L P S+NL + Q++I I L +RY Sbjct: 468 KGRYSTKITKIVLENSFNALEKIP----KVAISINLSMQDIEQESILETIYTLLQRYKKH 523 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 +I E+ E + + I ++ G +IAIDDFGTGY+N+ERL + DI+KID Sbjct: 524 APRLIFELLESENMKDVLQIKQFIHEVKAQGVKIAIDDFGTGYSNFERLLFFEPDILKID 583 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 G +++I TN ++ IV +I AK + L+ VAEFVE + ++ +G+ Y QGY G+ Sbjct: 584 GSLIRNIHTNRVNQHIVETIMLFAKKQKLTTVAEFVENETIFKMVKDMGIDYSQGYFFGK 643 Query: 724 PQPL 727 P+ L Sbjct: 644 PERL 647 >UniRef50_Q7MAP6 GGDEF FAMILY PROTEIN n=1 Tax=Wolinella succinogenes RepID=Q7MAP6_WOLSU Length = 698 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 115/414 (27%), Positives = 191/414 (46%), Gaps = 19/414 (4%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 NR Q TD LT LPN R L + + L ID+ + ++ YG + ++ Sbjct: 290 NRLLEDQLYTDKLTSLPNRRKLLEDLKHAPSPFLILLNIDSFKEVNDFYGTEIGDFVLKE 349 Query: 379 ICRTL-LPLMQENEKLYQLPGSELLLV----LSGPETEGRLQHMVNILNSRQIHWNNTGL 433 I + L L + Q +LY+L E L+ + EG Q + + ++S I + Sbjct: 350 IAKRLGLFVHQGRFRLYKLQADEYALLDMECSRDEDLEGVGQKVHDDVDSHLIFLKEQEI 409 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + A G ET+ LA++ H+ + + MV + + + Sbjct: 410 HIQISAGMAF--GENETVMTRADIALKLAKK---HNKPFLIYNDTMMVMKEYEENFRWIR 464 Query: 494 TIRTALDQGDLLLYAQPI-RNKEGEGYD-EILARL-KYDGGIMTPDKFLPLIAQFNLSAR 550 ++ ALD ++ Y QP+ NK E Y E LARL DG + +P F+ + + L R Sbjct: 465 MLKNALDDNRIICYFQPVFNNKTKEVYKYECLARLLGEDGKVYSPFFFIEISKKARLYHR 524 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 ++ + C +FS+NL +L + II +R+ ++ +A I E Sbjct: 525 ITQAIVSDACRVFKEVNC-----KFSINLSIDDILDHHTINFIIEELERHGVAHKA-IFE 578 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 I E + N E I+++ K G +IAIDDFG+GY+N+ + RL DIIKID +++ Sbjct: 579 ILESEGIDNYEEVDAFIQRVRKLGCQIAIDDFGSGYSNFAHILRLNVDIIKIDASIIQNS 638 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 T+ +I ++I + ++ + VAEFV +++ + GV Y QGY IG P Sbjct: 639 DTDKNSQIIAKTIVEFSRKLGIKTVAEFVHSKEILETVKSFGVDYSQGYFIGEP 692 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 131/253 (51%), Gaps = 20/253 (7%) Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQ 544 + + N IR AL + + LY QP +G+ G + ++ G ++P +F+P+ + Sbjct: 657 EHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHPKQGTISPIEFIPIAEE 716 Query: 545 FNLSARFDLQVLESLLKWLATHPCD-----KKGP-----RFSVNLMPLTLLQKNIAGRII 594 L + L +W+ C + P ++N+ Q +++ Sbjct: 717 TGL--------ILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVL 768 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +RY +P + LE+TE + E ++ + QL K+G ++DDFGTGY++ LKR Sbjct: 769 EALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKR 828 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +KID FV+D++TN+ DA I R+I LAK+ +L+V+AE VETQ+Q+ L G Sbjct: 829 LPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCL 888 Query: 715 YLQGYLIGRPQPL 727 QGYL RP PL Sbjct: 889 DFQGYLFSRPVPL 901 >UniRef50_B2JVY6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVY6_BURP8 Length = 981 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 113/418 (27%), Positives = 187/418 (44%), Gaps = 14/418 (3%) Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQEAGK----SFCCLRIDNLEFMSRHYGLMMRVHCI 376 R H A DPLT L N +E A ++++ + + L +D + + +G + Sbjct: 520 RLHFLAEHDPLTGLLNRLGIEHAIDRQSSQNGPWALAYLDLDRFKVFNDLFGHGTGDEIL 579 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSG---PETEGRLQHMVNILNSRQIHWNNTGL 433 R + L+ + + + ++ G E + VLS E R + +V+ LNS + N Sbjct: 580 RHVGARLVERLGPHVPIGRIGGDEFVCVLSNMTIDEAIARCREIVDALNSAPVPVNTRAF 639 Query: 434 DMGYGAAWGRFDGNQETLQPLL-GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + L L + A + ++AL +T + L+ Sbjct: 640 QVRGSIGVVECTEGERVLDALAYADRACRAAKRGGSARLVALRRGAPAFEERTAEINLIE 699 Query: 493 NTIRTALDQGDLLLYAQPIRN--KEGEGYD-EILARLKY-DGGIMTPDKFLPLIAQFNLS 548 + L +G L L QPI + + + D E+L R++ DG + T K + Sbjct: 700 ALGQRRLPEG-LFLVMQPIMSMREPTQALDFEVLLRMRSPDGAVATAGKLIAAAEDSGTI 758 Query: 549 ARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 D VL + L WL+ + RF VNL +L ++ G + L RY + Sbjct: 759 VEIDRWVLSTTLAWLSDNRASLINTRFVCVNLSGGSLNDEHFLGELFDLLSRYEDVVHLL 818 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 +EITE A + E + I ++H G +IAIDDFG G+ + LK+L AD +KIDG FV Sbjct: 819 CIEITESVALHDLEHTERFIARVHDMGAKIAIDDFGAGHTSLRYLKKLSADALKIDGEFV 878 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + + + D IV ++ LA + +AE+VE + L +LGV Y+QG+ I +PQ Sbjct: 879 RTMCNHPADIAIVEAMISLAHNLGMRSIAEWVEDLETLRALDELGVDYVQGFAIAKPQ 936 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 113/436 (25%), Positives = 200/436 (45%), Gaps = 49/436 (11%) Query: 326 ALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLTLLPN R AL + + + +DN + ++ G M ++ Sbjct: 584 AFYDPLTLLPNRRLLTDRLNHALASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLK 643 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGRLQHMVNILNSRQIHWNNTGLDMG 436 + L ++E++ L +L G E +++L E ++ + + L+ Sbjct: 644 QVALRLKSCIREDDTLARLGGDEFVVILENLSELAMDAATKAELIGEKIL----AALNQV 699 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT-- 494 Y A + G L + ++ + S++ SG+ T + L+T Sbjct: 700 YPLASQEYHGAASIGVTLFAGHALSIDELMKQADIAMYQSKK---SGRNTLRFFDLDTQK 756 Query: 495 -----------IRTALDQGDLLLYAQPIRNKEGEGYD-EILARLKYD-GGIMTPDKFLPL 541 +R A+D+ L L+ Q N G E L R + G+++P F+PL Sbjct: 757 IINERAELEIELRKAVDKKQLHLHYQIQLNSVGTPLSAEALIRWVHPVRGLISPAHFIPL 816 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDK----KGPRFS------VNLMPLTLLQKNIAG 591 D ++ + +W+ C + + RF+ VN+ QKN Sbjct: 817 AE--------DTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNFVA 868 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + +R+ I+P+ + LE+TE N E + + L + G + ++DDFGTGY++ + Sbjct: 869 LVKETVQRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLDDFGTGYSSLQY 928 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL + +KID FV+++ +++ D IVR+I +A++ +L+V+AE VET++Q LL + Sbjct: 929 LKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQDI 988 Query: 712 GVQYLQGYLIGRPQPL 727 G Y QGYL G+P P+ Sbjct: 989 GCNYYQGYLFGKPMPI 1004 >UniRef50_A6LL12 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Thermosipho RepID=A6LL12_THEM4 Length = 819 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 84/285 (29%), Positives = 148/285 (51%), Gaps = 10/285 (3%) Query: 447 NQETLQPLLGQLSW-LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 N E L+ ++ + + L++ ++ EE V + TK++ I+ A+ D + Sbjct: 537 NSEDLEEIIRKTTLALSKSKDVEMEIVYSKEMEEQVIKEVTKEI----QIKQAIKNRDFI 592 Query: 506 LYAQPIRNKEGEGYD-EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 + QPI + E E+L R + +G I+ P FL I + LQV E +++L Sbjct: 593 PFLQPISKENMEIVGAEMLLRWEKEGKIIPPSDFLDYIERSGQIHEISLQVFEKTMEFLK 652 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 HP K VN+ P+ L KN +++ ++++ISP+ + EITE S E Sbjct: 653 KHPNLK---FIDVNISPIQLKDKNFFDEYLKIIEKFNISPKKIAFEITENLFLSYDEQVK 709 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 NI ++ K G ++ +DDFGTGY++ L+ L D++KID F+K+I N + ++++I Sbjct: 710 ENISKIKKEGIKLCLDDFGTGYSSLSYLRNLPFDMLKIDREFIKNI-DNERNTNLLKAIY 768 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + + +L+ + E VET +Q +L +G + QGY G+P L + Sbjct: 769 SICETFNLTPIPEGVETVKQLEILSMIGFKLFQGYYFGKPMSLEE 813 >UniRef50_Q1YRT2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRT2_9GAMM Length = 314 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/257 (33%), Positives = 141/257 (54%), Gaps = 13/257 (5%) Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYD-GGIM 533 E + + K++ L +R A+D L+L+ QP I K G+ G E L R ++ G++ Sbjct: 48 ERGMEAEIAKRLKLEQELRKAIDSDQLVLHYQPQIDFKTGDLLGA-EALVRWEHPLKGLV 106 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLL----KWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 +PD F+PL + L + VL+++ +WL + R +VNL L+Q++ Sbjct: 107 SPDDFIPLAEESGLINQLTDWVLKNVAVQTKRWLD----EGYSLRLAVNLSVKDLMQEDF 162 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ L KR + P + LEITE + E + + ++ K G +A+DDFG+GY++ Sbjct: 163 HTKLEDLIKRSDLPPDVLELEITESTLMDHPELMIKELNKIKKMGITVAVDDFGSGYSSL 222 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+L D++KID F+ DI ++ D+ IV I LAK +S VAE VET+ Q+ +L Sbjct: 223 NYLKKLPVDVLKIDRSFISDIESDPNDSAIVAGIIALAKNLGMSTVAEGVETEAQRKILE 282 Query: 710 KLGVQYLQGYLIGRPQP 726 +LG QGYL+ +P P Sbjct: 283 QLGCDTFQGYLVSKPVP 299 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 137/250 (54%), Gaps = 10/250 (4%) Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQP----IRNKEGEGYDEILARLKY-DGGIMTPDKF 538 ++ K++ + N++R A+ +LLL+ QP I N+ E L R K+ + G + P +F Sbjct: 554 RSEKRLYIENSLRKAIQNEELLLFFQPKISTITNQVCGA--EALIRWKHPERGWVPPIEF 611 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF--SVNLMPLTLLQKNIAGRIIRL 596 +P+ + R VLE + L +K P F S+N+ L + N + R+ Sbjct: 612 IPVAEDSGIIERIGDWVLEEACR-LKKQWSEKNLPSFPLSINVSGKQLARANWSHRVQAT 670 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +Y I+P+ + LE+TE N E S+ E L + G +++IDDFGTGY++ LK++ Sbjct: 671 ILQYGINPEEIELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGYSSLSYLKKIN 730 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 AD+IKID FV D+ N D I ++I ++A + L V+AE VE Q+ LLH LG + Sbjct: 731 ADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRDLLHDLGCHMI 790 Query: 717 QGYLIGRPQP 726 QGYL +P P Sbjct: 791 QGYLYSKPLP 800 >UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TM92_ACIAC Length = 724 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 114/429 (26%), Positives = 197/429 (45%), Gaps = 25/429 (5%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQ-----------APEQEAGKSFCCL--RIDNLEFMSR 365 N + QA DPLTLLPN E ++AG+ + +D + ++ Sbjct: 263 NAQLQKQAFADPLTLLPNRLLFEDRLSHALLRLDRMRRRDAGQRLGVMFVDLDGFKPIND 322 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN-ILNSR 424 +G +RS L +E++ + ++ G E LL+L + N +LNS Sbjct: 323 SFGHAAGDAILRSAAERLRLQARESDTVARVGGDEFLLLLENVNDPADCLAVANRLLNSL 382 Query: 425 QIHWNNTGLDMGYGAAWGRF----DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + G + + G G ++ L + A+++ + + + E Sbjct: 383 GQPFEVAGKTVQIACSVGIVVYPDHGERDKLVANADAAMYAAKRAGGNGYAMF----ESH 438 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYDGGIMTPDK 537 + T Q+ L + +R A+ +G+L L+ QP I + G G + +L G ++P + Sbjct: 439 MDSDATAQLSLQHDLRQAIARGELSLHYQPKIDARRGRINGVEALLRWRHPLRGNVSPAE 498 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+P+ +F L A+ V+E + +A D R ++NL L + +A RI Sbjct: 499 FIPVAERFGLIAQLGNWVIEEACRQMAAWSWDGLRMRVAINLSAYQLRESGLADRIRDAL 558 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 +R+ + ++ EITE A + ++ IE+L + G ++IDDFGTGY++ L+ L A Sbjct: 559 QRHGVPASHLLCEITESVAMEDTRATQRAIEELGRIGVYLSIDDFGTGYSSLHYLRSLPA 618 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +KID FV+D+ +V ++ LA A L VVAE VET+ Q+ +L + LQ Sbjct: 619 RQLKIDRSFVRDLEEQEDARAVVDAVVRLAHALGLRVVAEGVETEGQRDILAAMHCDELQ 678 Query: 718 GYLIGRPQP 726 G+ RP P Sbjct: 679 GFYFARPMP 687 >UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAJ7_CHRVI Length = 1030 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 116/448 (25%), Positives = 198/448 (44%), Gaps = 38/448 (8%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ-------APEQEAGKSFCCLRIDN 359 + R R + RR H A D LT L N + Q PE A + L +D Sbjct: 570 FHARDITRQREVQRRLHQLAHYDGLTGLANRQFFRQNLSIHLMGPEP-AQIAVLFLDLDR 628 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G +R++ L +++ + + + G E ++ L G + + H Sbjct: 629 FKTINDTLGHAAGDQLLRTVAERLRSVLRSEDLVARWGGDEFVVALLGVQDRDAVMHKAA 688 Query: 420 ILNSR-----QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + +R + + + GAA G L L+ +S H Sbjct: 689 DIIARLAEPHPLAGRSIRVPTSIGAALYPEGGTSADLLIRNADLALYRAKSNGRGHCQLF 748 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD---EILARLKYDG- 530 D +++ + ++++ N +R ALD+G+L L+ QP + + G G E L R ++ G Sbjct: 749 DP---VLASEISERLEFENDLRDALDRGELELFYQP-QVEVGSGRIVGLEALLRWRHPGK 804 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK------KG---PRFSVNLMP 581 G+++P F+P++ + L +E + +W+ C + +G PR +VN+ Sbjct: 805 GMVSPTVFVPILEELGL--------IELVGEWVLRTACRQHRVWRERGLSPPRIAVNVSG 856 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L+ A + R+ + AV LEITE + + + + +L + G IA+DD Sbjct: 857 RQFLRLGFAETVERILTEEGTAVTAVELEITETVLAHDTDVCIETLRRLKRLGLEIALDD 916 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR D +KID FV + N DA I +I LA+ L +AE VET Sbjct: 917 FGTGYSSMSYLKRFPVDTLKIDRAFVAECDVNAEDAAICTAILSLARGLGLKTLAEGVET 976 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + G Q+ QG+ RP P+ + Sbjct: 977 PGQLEFLRREGCQFYQGFFFRRPMPVEE 1004 >UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax sp. JS42 RepID=A1W268_ACISJ Length = 1108 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 83/254 (32%), Positives = 132/254 (51%), Gaps = 7/254 (2%) Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY---DEILARLKYDG-GIMTPD 536 + T + + L ++ A +G+L L QP R G G E L R ++ G+++P Sbjct: 841 MQAHTQRSLELAAGLKDAAHRGELFLVFQPQRTL-GSGALAGAEALLRWRHPRWGLVSPA 899 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ Q D V+E + + L P +VN+ + + ++R Sbjct: 900 EFIPIAEQSGSIVAIDFWVVEQVAQQLRAWDAAGLPPLVVAVNVSAAQFARPHFVEELVR 959 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + +R ISPQ + +E+TE A N E + I +LH+ GFR+A+DDFGTGY++ LKR Sbjct: 960 ILQRMDISPQRIEVELTEAVALKNPEQAETTIRRLHEVGFRVALDDFGTGYSSMSYLKRY 1019 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV+++ D IV +I +A + ++ +AE VET +Q ALL G Sbjct: 1020 AIDKLKIDQSFVRELAHQASDQAIVTAIIKMAHSLRMATIAEGVETAEQAALLQACGCDE 1079 Query: 716 LQGYLIGRP-QPLA 728 +QGY RP +P A Sbjct: 1080 MQGYWYSRPLEPAA 1093 >UniRef50_UPI0001C31434 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31434 Length = 769 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 115/448 (25%), Positives = 208/448 (46%), Gaps = 31/448 (6%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-----GKSFCCLRID 358 C+ + I R + + +L A D LT L N RA ++ EQ G + + +D Sbjct: 311 CIKQLEDISDRKRFEGQLAYL-ADHDALTGLYNRRAFQRELEQRTSEDGRGGAVVVIDLD 369 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---PETEGRLQ 415 + + ++ G I + R L +++ + L +L G E +LSG E E + Sbjct: 370 HFKDINDTLGHAAGDEVIVRVARLLAKRLRKTDVLGRLGGDEFATLLSGVSREEAEAVIA 429 Query: 416 HMVNILNSRQI---HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ--------LSWLAEQ 464 ++ ++ + + + GL G A F+G+ PL G+ + A++ Sbjct: 430 ELLRVVREQSVVVEGGHPIGLTASAGIAL--FEGDT----PLSGEELLVSADIAMYDAKE 483 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-KEG-EGYDEI 522 + H +++++ E Q T+++ +R AL+ +L+ QP+ + + G E+ Sbjct: 484 AGRDRHAISVET--EQRQAQMTERMAWSQRMRDALEHDGFVLFQQPVVDLRTGLPKCHEL 541 Query: 523 LARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 L R++ D G ++ P FLP+ + L A D V + +A + R +VNL Sbjct: 542 LLRMRGDDGELIPPAAFLPIAERSGLIAEIDRWVTRRAIATIAAQEAAGRPLRLAVNLSG 601 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 ++ + I P +++ E+TE A N + + L + G +A+DD Sbjct: 602 ASVSDPGLLEIIEGDLAAMAPPPGSLVFEVTETAAIVNLDRARAFAATLAELGCELALDD 661 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FG G+ ++ LKRL D +KIDG F++ + ++ D ++VR+I ++A+ VAEFV Sbjct: 662 FGAGFGSFYYLKRLPFDYLKIDGDFIRQLTSSHEDQLVVRAIVEIARGLGKRTVAEFVGD 721 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + LL +L V QG+ +GRP PL D Sbjct: 722 EATLELLRELRVDDGQGFHLGRPAPLED 749 >UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E99 Length = 994 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 114/446 (25%), Positives = 197/446 (44%), Gaps = 31/446 (6%) Query: 307 YMVRIYHRSEWLNRRWHLQALTD--PLTLLPNFRALEQAPEQE--------AGKSFCCLR 356 ++ +I SE + LQ + D PLT L N R+ E+ Q A + L Sbjct: 544 FLGQIQDVSERVRYEAQLQHMADHDPLTGLLNRRSFERELNQHIHRVERYGAEGAALVLD 603 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL-SGPETEG--- 412 ID + ++ G + I + +TL +++++ L +L G E ++L G + E Sbjct: 604 IDRFKHINDTLGHNVGDELIVKVAQTLRSRLRDSDVLARLGGDEFAVLLPKGGQQEAEAV 663 Query: 413 --------RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 R Q ++ R+ + G+ A +G G + L+ + Sbjct: 664 AESILASVRAQSVLTTAGRRRPITTSVGI-----ALFGETGGLSAEDVLVNADLAMYDAK 718 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDE 521 S+E S + ++ IR AL++ LYAQPI R+ ++ Sbjct: 719 EAGRDRAATFSSQERGAS-RMKARITWAERIRDALEEDRFTLYAQPIVELRSGAVRQHEV 777 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 +L L G ++ P F+ + +F+L D V+ +K + + F VN+ Sbjct: 778 LLRMLDEQGEVIPPAAFIGVAERFDLMQEIDRWVVARAIKEMGQQRRAGRDLVFEVNISG 837 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + ++ I R + I P ++LE+TE A +N + +L + G R A+DD Sbjct: 838 ASTGDPDLLTIIERELRENEIDPINLVLEVTETTAVANIPRAQEFAARLAELGCRFALDD 897 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FG G+ ++ LK L DI+KIDG FV+ T+ D +++R+ ++A+ +AE+V Sbjct: 898 FGAGFGSFYYLKHLPFDILKIDGEFVRSCTTSQTDQLLIRAAVEIARGMGKETIAEYVGD 957 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPL 727 + LL LGV Y QG+ +GRP PL Sbjct: 958 DETVELLRTLGVDYAQGFHLGRPAPL 983 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 115/424 (27%), Positives = 202/424 (47%), Gaps = 23/424 (5%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCC--------LRIDNLEFMSRHYGLM 370 R H A D LTLLPN +L+ E+ ++F + +D+ + ++ G Sbjct: 796 EERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHH 855 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--RQIHW 428 + + + R L +M ++ + +L G E ++VLS + + R+ + L S Q + Sbjct: 856 VGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSDTDHD-RVAKVAEALRSGLNQTYL 914 Query: 429 -NNTGLDMGYGAAWGRFDGNQETLQPLLGQLS---WLAEQSCAHHHVLALDSREEMVSGQ 484 +N L F + ++++ L+ + A+ + +++ + +V Sbjct: 915 IDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLV--- 971 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPL 541 T++ + +R A+ +LLLY QP I + + G + ++ + G++ PD+F+P+ Sbjct: 972 -TERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPI 1030 Query: 542 IAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + ++ VLE+ L LA KG R +VNL L + I II + ++ Sbjct: 1031 AEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKH 1090 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + A+ LEITE A E + + +L + G +AIDDFGTGY++ LK L D + Sbjct: 1091 KLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRL 1150 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 K+D FVKDI ++ DA I + +A L+VVAE VE + Q LL +G +QGY Sbjct: 1151 KLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYY 1210 Query: 721 IGRP 724 +P Sbjct: 1211 FSKP 1214 >UniRef50_C8WAS4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Zymomonas mobilis RepID=C8WAS4_ZYMMN Length = 579 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 118/431 (27%), Positives = 198/431 (45%), Gaps = 25/431 (5%) Query: 318 LNRRWHLQALTDPLTLLPN----FRALEQAPEQEAG-KSFCCLRIDNLEF--MSRHYGLM 370 L ++ L D LT LPN R L+ E G S + ID + F ++ G + Sbjct: 144 LQSTMRMKILRDSLTGLPNRIGFSRLLDDVILLEKGTASVAVIAIDLIRFSRINESMGSV 203 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS---GPETEGRLQHMVNILNSRQIH 427 + + S+ R L +++ ++L ++ G + ++LS G + L S + Sbjct: 204 VGDELLVSVARRLTSVLRPGDRLGRIGGDQFDILLSLHHGTSDVWHAARRIKALMSTPFN 263 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 N + + + D E + LL +++ HV + E V K Sbjct: 264 LANLKVKVNCAIGFSLMDDRIEVSEDLLRDAQIALKRAKETDHVEVYNVGEASV---LQK 320 Query: 488 QVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDG-GIMTPDKFLPLIA 543 + L +R A+D GDL L QPI NK+ G+ E LAR ++ G ++P +F+P+ Sbjct: 321 RFSLETDLRRAIDNGDLHLVYQPILSPYNKKIVGF-EALARWNHETLGPVSPAEFIPVAE 379 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKGP-----RFSVNLMPLTLLQKNIAGRIIRLFK 598 + L LES + DK+ R SVN+ L L++ N+ I + K Sbjct: 380 ESGLIVPLGRWALESSVH--TQQQWDKQAGYTLPIRVSVNVSALQLMRDNLTQLITDIKK 437 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + I+ + + LE+TE E S+ I +H+ G +I++DDFGTGY++ LK D Sbjct: 438 QTGINGERLTLELTESALMRYPEQSISVINTMHELGIKISMDDFGTGYSSLSYLKTFPID 497 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV ++ + I R+IT +A S+ + E +ET +Q+ ++ LG Y QG Sbjct: 498 HLKIDRSFVTNLAEDKTAIAITRAITSMASTLSIKTIVEGIETPEQKKIIMDLGCDYAQG 557 Query: 719 YLIGRPQPLAD 729 + RP P+ + Sbjct: 558 FYFSRPLPVDE 568 >UniRef50_C0QD16 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QD16_DESAH Length = 938 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 137/248 (55%), Gaps = 9/248 (3%) Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARL-KYDGGIMTPDKFLPLI 542 T+++ N + A++ +LY QPI + + + + E L RL G ++ P +F+ Sbjct: 686 TQRMYWKNVLEEAIENDRFVLYFQPILDLKTDRISHYECLIRLISEQGSVIPPGEFIEYA 745 Query: 543 AQFNLSARFDLQVLESLLKWLATH-PCDKKGPR--FSVNLMPLTLLQKNIAGRIIRLFKR 599 L D V+ K +A H +K+G S+NL +L + ++ I RL Sbjct: 746 EVLGLIGHIDRIVM---AKAIAQHLEFNKRGMTVGLSINLSGRSLNDRTVSHEIRRLLTL 802 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 H++P+ +I EITE A SN S+ I ++ + G R AIDDFG G+++++ LK L D Sbjct: 803 PHVNPEKIIFEITETAAISNFPSARTLINEVKELGCRFAIDDFGVGFSSFQYLKDLAVDY 862 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KIDG F++ I T+ D + V+S++++A A +AEFVE + ++L + + Y QGY Sbjct: 863 VKIDGSFIRKIDTSHGDRIFVKSMSEIAHALGKKTIAEFVENEAIVSVLREYEIDYAQGY 922 Query: 720 LIGRPQPL 727 IG+PQP+ Sbjct: 923 HIGKPQPI 930 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 125/441 (28%), Positives = 202/441 (45%), Gaps = 55/441 (12%) Query: 326 ALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN R A+ + + + +DN + ++ G M H + Sbjct: 399 AFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLNDTLGHDMGDHLLS 458 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSG--PE-TEGRLQHMVNILNSRQIHWNNTGLD 434 + LL ++E + + + G E +++L PE TE Q I+ + + N Sbjct: 459 QVAARLLACVRETDTVARFGGDEFVVMLETLRPELTEAASQ--AEIVAEKLLASLNQPFA 516 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA---LDSREEMVSGQTTKQVL- 490 +G G Q P +G ++ ++ + +L L + +G+ T++ Sbjct: 517 LG---------GQQHYSTPSIG-ITLFGDERLSVDELLKRADLAMYQAKGAGRNTQRFFD 566 Query: 491 ------------LLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYD-GGIMTP 535 L +R L +G+L +Y QP+ + G E L R ++ G+++P Sbjct: 567 PDMQAAVNARSNLEADLRQGLARGELCVYYQPVVDHRARLLGV-EALVRWRHPVRGMISP 625 Query: 536 DKFLPLIAQFNLSARFDLQVLES----LLKWLATHPCDKKGPR---FSVNLMPLTLLQKN 588 F+PL Q L QVL++ L +W ++K R SVN+ Q Sbjct: 626 ADFIPLAEQTGLILPLGQQVLQTACGQLQRW-----GERKQTRHLSVSVNVSARQFRQPG 680 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +++ + P+ + LE+TE + E ++ +EQL + G A+DDFGTGY++ Sbjct: 681 FVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSS 740 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL D +KID FV+D++T+ DA IVR+I LA++ L VVAE VET Q A L Sbjct: 741 LSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFL 800 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 G + QGYL GRP P+ D Sbjct: 801 RLHGCEGFQGYLFGRPGPVED 821 >UniRef50_B6BNW2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNW2_9PROT Length = 779 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 110/412 (26%), Positives = 190/412 (46%), Gaps = 23/412 (5%) Query: 326 ALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 A TD LT L N AL++ + + ID+ ++ YG + + LL Sbjct: 379 ANTDSLTKLGNRNALKEEIDYGENIFLILVNIDSFSQINDFYGHELGDAILVEFSSKLLQ 438 Query: 386 L--MQENEKLYQLPGSEL-LLVLSGPETE--GRLQHMVNILNSRQIHWNNTGLDMGYGAA 440 + E +L+++ G E +L + P + Q + +N+ + +++ + Sbjct: 439 SCSLYEELRLFRVSGDEFAILTIDMPAHTVVQKAQSIAKFINAHVYEVKDETVELNATIS 498 Query: 441 WGRFDGNQ--ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + +Q T L A+ + + LD E +L I+ A Sbjct: 499 ISLEEKDQLLITADMALKIARRDAKDLLVYDKAMNLDKEYE-------NNMLWTKKIKEA 551 Query: 499 LDQGDLLLYAQPI-RNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + ++L+ QPI N GE Y+ ++ + D ++TP FL + + L + V Sbjct: 552 IKNDKIVLFFQPIVDNATGEINKYESLIRLIDSDDKVITPYFFLEIAKKAKLYKQLTKIV 611 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 ++ + + + FSVN+ +L K I I+ + Y+IS + VI EI E + Sbjct: 612 IQKSFENFRENDFE-----FSVNISIDDILDKEINAYILEMLNIYNISHR-VIFEIVESE 665 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + N + I+ + + G R+AIDDFGTGY+N+E L RL+AD IKIDG +K+I+ N Sbjct: 666 SIENFDEIQRFIKSVKELGCRVAIDDFGTGYSNFEYLMRLEADFIKIDGSIIKEILDNKN 725 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +I I D AK + V+AEFVE+++ + +LG++ QGY P+P Sbjct: 726 SEIITTVIVDFAKKMGIQVIAEFVESEEIFQKVKELGIEKSQGYYFSEPKPF 777 >UniRef50_A8UTB3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UTB3_9AQUI Length = 625 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 83/248 (33%), Positives = 139/248 (56%), Gaps = 12/248 (4%) Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGG-IMTPDKFL 539 + K+ L + +R A++ G ++ + QPI R E Y E LAR+K + G I++P+ FL Sbjct: 386 EELKRRLSIADVRDAIESGRVICHYQPIVDLRTHEISHY-EALARIKDEKGEIVSPNMFL 444 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 I + RF +++ +K L +++ R S+NL+P + + + + + KR Sbjct: 445 EDIKGTFIYTRFVKEIIRMNVKLLK----EREDIRVSINLIPTDVTDETVLEELRSIDKR 500 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 ++LEITE + + E ++ +L K GFRI IDDFG GY+N + +++ D Sbjct: 501 IR---GRMLLEITEVEGIPSFERMKESVMELRKLGFRICIDDFGAGYSNLINITQMRIDY 557 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KIDG +KDI N L ++ ++IT K ++ V+AE+VE + L +LGV Y QG+ Sbjct: 558 LKIDGSIIKDIHRNKLSKLLTKTITSFCKEVNIKVIAEYVENEAILKTLRELGVDYGQGF 617 Query: 720 LIGRPQPL 727 IG+P+PL Sbjct: 618 HIGKPKPL 625 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 121/445 (27%), Positives = 204/445 (45%), Gaps = 37/445 (8%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDN 359 +V I R R H+ AL D LT LPN AL A + + + +D Sbjct: 487 LVEINERKMAEERVKHM-ALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDR 545 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS----GPETEGRLQ 415 + ++ G + + L ++ N+ + +L G E ++VL+ E G ++ Sbjct: 546 FKLVNDTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIE 605 Query: 416 HMV-NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL------SWLAEQSCAH 468 + N + ++ + + G A DG ET L+ + + ++CA Sbjct: 606 DIQQNFKPAVKLALQDMFVTPSIGVAIYPEDG--ETPVQLMKNADAAMYHAKASGRNCAQ 663 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILAR 525 + +LD +++ L N + AL G LY QP +++ G + ++ Sbjct: 664 YFNRSLDD-------SLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRW 716 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPL 582 + G+++PD F+PL + L VL LA K+G SVNL L Sbjct: 717 NHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQ--WRKQGFDQLSVSVNLSAL 774 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + +++ A + + + Y + + LE+TE NAE ++ ++++H G +I++DDF Sbjct: 775 QVQKESFAREVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDF 834 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID FV+DI +T DAMI ++I +A +L V+AE VET Sbjct: 835 GTGYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETN 894 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 Q LL G + QGYL +P P+ Sbjct: 895 AQLELLRDYGCEQYQGYLFAKPLPV 919 >UniRef50_C7G9A4 Putative hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase n=2 Tax=Roseburia RepID=C7G9A4_9FIRM Length = 554 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/278 (29%), Positives = 146/278 (52%), Gaps = 14/278 (5%) Query: 461 LAEQSCA----HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG 516 +A Q C HH L E + + ++ ++N + TAL++ ++Y QP +G Sbjct: 272 IAAQECKGQYMHHEALYT----EQMGKEMQREQQIINEMDTALEEKQFVVYFQPKYELDG 327 Query: 517 ---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKG 572 G + ++ K DG +++P +F+P+ + + D V + + + +AT +K Sbjct: 328 YTPRGAEALVRWKKPDGTMVSPGEFIPVFEKNGFIIKLDYYVWDQVCQLIATALRAGRKP 387 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN-IEQLH 631 SVN+ + L N ++ L ++Y I P+ + LE+TE FS+ E+ + N + LH Sbjct: 388 DPISVNVSRVNLYNPNFLESLVNLVEKYRIPPEYLHLELTE-SVFSDTENVILNAVNYLH 446 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 K GF I +DDFG+GY++ LK + D++KID F+ + I+ ++ +AKA Sbjct: 447 KAGFTILMDDFGSGYSSLNVLKDIDLDVLKIDMKFLSKGKDDGRGEKILAAVIQMAKALD 506 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VE ++Q +L +LG Y+QGY +P P D Sbjct: 507 MPVIAEGVEEKKQVQMLKRLGCNYIQGYYFAKPMPQED 544 >UniRef50_C0QHY0 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHY0_DESAH Length = 559 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 114/421 (27%), Positives = 193/421 (45%), Gaps = 30/421 (7%) Query: 325 QALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 A D +T LPN +A++ A Q++ + DN + + G + Sbjct: 135 DATHDIVTDLPNRILLLDRLEQAIQAARRQKSTLALLIFGFDNFKEIHDTLGHFSSDRLL 194 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHW------NN 430 + I L ++++++ L ++ E ++L P E + + ++NI+ Q + Sbjct: 195 KQIVSRLQGVLRKSDTLARMGSDEFAILL--PMVENK-EAIINIIGKIQKTFIEPFSIEG 251 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 GL++ F + + + +L Q + +A A + + + Sbjct: 252 LGLEVQACIGIAMFPQHGKDVDTIL-QRTHVA-LCAAKQDIKKYTIYSNGLDKHNPHHLT 309 Query: 491 LLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 ++ +R A++ +L+L+ QP I+ + G + ++ + G + PD F+P+ + L Sbjct: 310 MVGELRQAIENDELVLHFQPKINIQTRSISGVEALVRWQHPEHGFLPPDDFIPMAERTGL 369 Query: 548 SARFDLQVLESLL----KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 + VL L KW H + K ++NL P T L + II + Y I Sbjct: 370 IKPLSIWVLNHALSQGEKW---HQQNFK-LSIAINLSPATFLDPELPNLIIGMLSLYDIP 425 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P V LEITE N + +M +E+L G +I+IDDFGTGY++ LK++ A +KID Sbjct: 426 PNFVTLEITEGSMIKNPDLAMEILERLTSKGIKISIDDFGTGYSSLVYLKKMPASEVKID 485 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV D++ N DA+IV+SI DL L VVAE VE +Q L LG LQGY + Sbjct: 486 KSFVTDMLKNDNDAVIVKSIIDLGHNLGLKVVAEGVEDKQTANYLKTLGCDLLQGYYFSK 545 Query: 724 P 724 P Sbjct: 546 P 546 >UniRef50_Q5P8V8 Predicted response regulator receiver n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P8V8_AZOSE Length = 599 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/249 (34%), Positives = 126/249 (50%), Gaps = 3/249 (1%) Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGEGYD-EILARLKYDG-GIMT 534 E + G + L + + AL+ +L+L+ QP + G E L R ++ G++ Sbjct: 329 EAAMEGSARAHLRLESDLHHALEHSELVLHYQPEMEAASGRMVAVEALVRWQHPSHGLIG 388 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 PD F+PL + L VL+S L R +VN L ++I R+ Sbjct: 389 PDTFIPLAEEVGLIGPIGAWVLDSACAQLKAWRDAGHSLRVAVNFSADQLQDRDITDRVA 448 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +R+ + +++EITE +++ N+ L + G R+AIDDFGTGYA+ LK Sbjct: 449 AALERFGLQADDLVVEITESVWLDPESAAIDNLHHLKRLGVRLAIDDFGTGYASLSYLKH 508 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L DI+KID FV D+ +DA IVR I LA L V+ E VETQ Q AL+ +G Sbjct: 509 LPVDILKIDRSFVTDLAEVGVDAAIVRGIVSLAHKLDLEVIVEGVETQTQCALVRDMGCD 568 Query: 715 YLQGYLIGR 723 +QGYL+GR Sbjct: 569 VVQGYLLGR 577 >UniRef50_D0IWU4 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IWU4_COMTE Length = 869 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/242 (33%), Positives = 127/242 (52%), Gaps = 9/242 (3%) Query: 495 IRTALDQGDLLLYAQPI-------RNKEGEGYDEILARLKYDGG-IMTPDKFLPLIAQFN 546 IRTALD+ LYAQ I ++ G + E+L RL+ + G I+ P F+P ++ Sbjct: 560 IRTALDEDRFCLYAQSIAPLQARKHSRHGGMHFEVLLRLRDENGQILAPGHFIPAAERYG 619 Query: 547 LSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L D V+ L+ LA P K ++NL +L + + +++ I+PQ Sbjct: 620 LMPSLDRWVITRALQTLAQQPGHAKLVETCAINLSGPSLDDDGLLEFVKEQLQQHAIAPQ 679 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + EITE A N ++ I+ L G R A+DDFG G ++ LK+L D +KIDG Sbjct: 680 KLCFEITETSAIGNLSNATRLIQSLRALGCRFALDDFGVGMSSLTYLKQLPVDYLKIDGG 739 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+D++ + D +V I + + +AEFVE+++ L +GV Y+QGY I RP+ Sbjct: 740 FVRDMLKDKGDHAMVEMINRIGQTLGKKTIAEFVESREIAEELMTMGVDYVQGYAIARPK 799 Query: 726 PL 727 P+ Sbjct: 800 PM 801 >UniRef50_B4VZB0 Cyclic diguanylate phosphodiesterase (EAL) domain, putative n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VZB0_9CYAN Length = 267 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/267 (32%), Positives = 132/267 (49%), Gaps = 24/267 (8%) Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI----RNKEGEGYDEILARL-KYDGG 531 ++ + T++Q L +TAL + LY QPI + EG + EIL R+ DG Sbjct: 2 QQNLCQESTSRQAL-----QTALIEDRFCLYFQPIFPLLQGDEGHVHKEILIRMVGQDGR 56 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLK-----------WLATHPCDKKGPRFSVNLM 580 I+ P+ FLP + L D VLES W + C G + NL Sbjct: 57 IIPPNYFLPCAEESGLMPSIDRWVLESFFNGIYHPSKCMGCWARDYYC---GCIIAFNLS 113 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 ++ + + + + P +++ EITE A N + + I++L G + A+D Sbjct: 114 GSSVNDDSFLDFLENAVINHPVPPSSLVFEITETVALINIDKTRQFIQRLQNLGCQFALD 173 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG ++ LK L D +KIDG+FV+D+V N + IV +I +AKAK + +AE+VE Sbjct: 174 DFGTGMSSLAYLKELPLDFVKIDGMFVRDVVQNPISEAIVSAIVQMAKAKQIKTIAEYVE 233 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPL 727 L LGV Y QG+ +G+P P+ Sbjct: 234 NVAILERLQALGVDYAQGFYLGKPTPI 260 >UniRef50_Q3ID42 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3ID42_PSEHT Length = 522 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 131/234 (55%), Gaps = 9/234 (3%) Query: 498 ALDQGDLLLYAQPIRN-KEGEGYD-EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L G+ QPI N + G+ E+LAR K D G++TPD+F+P++ Q NL+ F + Sbjct: 282 GLKSGNFYWVYQPIVNLQSGKIIGCEVLARFKDDYGVLTPDQFIPILRQINLTWSFTKIM 341 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG--RIIRLFKRYHISPQAVILEITE 613 + ++L L + G + S+N+ P + Q N+ +I L + S + LEITE Sbjct: 342 INTVLNELESAEQLPSGLKVSLNIFPCDVEQGNVLSLPKIAGLMQ----SKFVICLEITE 397 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 ++ + + Y + L + GFR+++DDFGTGY+N + L L +KID FV+DI T Sbjct: 398 DEYLDSTIAHGY-FKTLIESGFRLSLDDFGTGYSNLKNLHNLSFHQLKIDRSFVQDIATE 456 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 L A ++ +I +L + VAE +ET +Q+ +L + GV Y QG+ GRP P+ Sbjct: 457 GLKASMIPNIMELVHKFGYTCVAEGIETTEQEVILKEAGVHYGQGWKYGRPMPI 510 >UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase n=11 Tax=Clostridium RepID=A7GAB5_CLOBL Length = 892 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 134/252 (53%), Gaps = 19/252 (7%) Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD--EILARLKYDGGIMTPDKFLPLIAQF 545 ++L N +R AL++ +LL+Y QPI + + E L R K+D I++P++F+PL Sbjct: 641 DLILENRLRRALEKNELLVYFQPIYHLKTSKIIAMESLVRWKFDNKIISPNQFIPLAKNI 700 Query: 546 NLSARFDLQVLESLLKWLATHPC---------DKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 A D W+ C + K SVN+ + KN ++ + Sbjct: 701 GEIANID--------NWVLNKACSQCNLWQKQNNKPLYVSVNISFKQMKDKNFVDNVLNI 752 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + + P + LEITE++A + + S+ +E L + G +I++DDFGTGY++ + +L Sbjct: 753 LRTTKLEPSYLCLEITEDEAMEDVDLSIKTLEALKRHGIKISLDDFGTGYSSLSYVTKLP 812 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D IKID +K+I + IV+SI ++K+ +++VAE VET +Q +L +LG ++ Sbjct: 813 IDNIKIDKSIIKNIHKDNKSLQIVKSIILMSKSLDINIVAEGVETIEQLEILQELGCDFI 872 Query: 717 QGYLIGRPQPLA 728 QG+ I P P+ Sbjct: 873 QGFYISEPLPIK 884 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 124/454 (27%), Positives = 209/454 (46%), Gaps = 46/454 (10%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------APEQEAGKSFCCL 355 ++CL++ I R + H QA D LT LPN LE A + G+ L Sbjct: 415 ALCLMFH-DITDRRRFQEELLH-QATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALL 472 Query: 356 --RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG------ 407 +DN + ++ G +RS+ + ++ + +L G E ++VL+ Sbjct: 473 MFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDD 532 Query: 408 ----PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 E+ L M L R+I + MG F + +T++ L+ + A+ Sbjct: 533 AVTVAESFRNLLAMPFFLGGREIFITAS---MGISL----FPDDGDTMEALIKK----AD 581 Query: 464 QSCAHHHVLALDSRE---EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD 520 + H +S + E ++ + ++ + +R AL++G++LL+ QP R + G G Sbjct: 582 TAMYHIKESGRNSFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQP-RLEPGTGAV 640 Query: 521 ---EILARLKY-DGGIMTPDKFLPLIAQFNLSARFDLQVLESL----LKWLATHPCDKKG 572 E L R D G+++P F+P+ L VL + L+W H Sbjct: 641 VGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEW---HRMGHDS 697 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 R SVN+ + + R++R+ ++ +SP V LE+TE N + ++ + +L + Sbjct: 698 LRVSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRE 757 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G I+IDDFGTGY++ LKR D++KID F+ D+V DA IV +I +A + Sbjct: 758 RGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHM 817 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 VVAE VET +Q LL + + +QG+ RP P Sbjct: 818 KVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLP 851 >UniRef50_B8GN37 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GN37_THISH Length = 803 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 132/239 (55%), Gaps = 8/239 (3%) Query: 493 NTIRTALDQGDLLLYAQPIRNK-EGE-GYDEILARLKYDGG---IMTPDKFLPLIAQFNL 547 + IR AL+Q LLL+ Q + + GE + E LAR++ I+ P +F+P+ + L Sbjct: 561 DRIRMALEQDLLLLHYQGVYDAASGELVHMEALARIRDPRDLERILMPGQFVPIAEKTGL 620 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 D +VLE + LA +P P +VN+ + +A I L R+ + P + Sbjct: 621 ILALDRRVLELGIAQLADNP---DMPPLAVNISGRSFDDPALADAIRELIARHRVDPSRL 677 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 I+E+TE A S + + IE +H+ G ++ +DDFG G++++ LK + D++KIDG+FV Sbjct: 678 IIELTETAAVSEIQEAQRFIESMHRLGCKVCLDDFGAGFSSFAYLKYIDVDMLKIDGMFV 737 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +D+ + + + VR++ D+AK VAEFVE +L+ LGV QGY + RP P Sbjct: 738 RDLTRDRENQVFVRAMVDVAKGLGKRTVAEFVEDAATLEMLNTLGVDMAQGYHLHRPGP 796 >UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEH3_9GAMM Length = 700 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/258 (30%), Positives = 136/258 (52%), Gaps = 20/258 (7%) Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTP 535 E ++ + +++ L +R +D G+L L QPI N E + G++ ++ + DG ++ P Sbjct: 426 EDINRRLVERLDLEEKLRNVVDNGELALQYQPIFNLETQKIAGFEALVRWPQADGSVIMP 485 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP---------RFSVNLMPLTLLQ 586 D F+P A ++ V++ + +W+ C + P ++N+ PL L Sbjct: 486 DSFIP--------AAENIGVIQKIDEWVLASACRETAPFLLSGDDNLCLAINISPLQLED 537 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ + + P+ + LEITE S+AE++ NI+ L + G R+++DDFGTGY Sbjct: 538 PGYVAFVMAQLEANQLEPRHLELEITERVLVSDAETTDRNIKALTELGIRMSVDDFGTGY 597 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKR +KID FV D+ + +V +I +AK + V+AE +ET+ QQ Sbjct: 598 SSLGYLKRYPLHTLKIDRSFVADMDVDDSARRLVETIILMAKGLQMDVIAEGIETESQQV 657 Query: 707 LLHKLGVQYLQGYLIGRP 724 LLH+LG QGY + RP Sbjct: 658 LLHELGCSQAQGYFLSRP 675 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/238 (34%), Positives = 126/238 (52%), Gaps = 6/238 (2%) Query: 495 IRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLS---A 549 +R L + +LL+Y QP+ + + G + ++ G++ P F+PL Q L Sbjct: 604 LRQGLARAELLVYYQPVVDHQARLMGAEALVRWRHPQRGMIGPADFIPLAEQTGLILPLG 663 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 ++ LQ + L+ + HP D G SVN+ Q +++ K + P+ + L Sbjct: 664 QYVLQTACAQLQRWSQHP-DTAGLSISVNVSARQFRQPGFVAQVLHQLKSHGADPRRLKL 722 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE + E ++ + QL G A+DDFGTGY++ LKRL D IKID FV++ Sbjct: 723 ELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVRE 782 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++ + DA IVR+I LAK+ L VVAE VET Q + L G + QGYL GRP P+ Sbjct: 783 VLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQLHGCEGFQGYLFGRPVPM 840 >UniRef50_Q2YZH5 Putative uncharacterized protein n=1 Tax=uncultured gamma proteobacterium RepID=Q2YZH5_9GAMM Length = 650 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 122/439 (27%), Positives = 201/439 (45%), Gaps = 23/439 (5%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--EAGKS------FCCLRIDN 359 + ++ + + N + QA DPLT LPN AL +Q E+ +S FC + I+ Sbjct: 189 LANLFQKIDDTNLQLKFQAHHDPLTQLPNRDALSYVTQQAIESARSAEGELIFCLIDIEA 248 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 L+ ++ G + I + L ++ ++ + + G++ ++L+ ET G ++ + N Sbjct: 249 LKDINDSLGHENGDILLNLISQRLKGSLRSSDHIGRFGGNKFAVILNHTET-GNIEAISN 307 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L NN L + F + + Q L+ + AE + +ALD Sbjct: 308 KLLENFEATFEINNHSLYVRAILGISIFPSHADNSQVLIQK----AETALHKARKMALDF 363 Query: 477 R--EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILAR-LKYDG 530 + + ++ L + +R A+ L LY QP IR+ + E LAR + Sbjct: 364 AIYDTSLDKNNADRLRLTHDLRGAIHNDALKLYYQPQLDIRSGTIKSV-EALARWIHPTQ 422 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G + PD F+ + L VL + ++ A SVNL L + + Sbjct: 423 GFIPPDVFIEIAEHAGLIQSLTDWVLRTAIRQSAEWQKIGLHITVSVNLSARNLHDETLG 482 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ L +++ P+ + LEITE ++ E + ++ L G RI+IDDFGTGY++ Sbjct: 483 TQVSNLLNYWNVKPEQLCLEITETSMMADPEHARTVLDGLDNLGVRISIDDFGTGYSSLA 542 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+L D +K+D FV ++ + DA IVR+ LA L VVAE VE Q Q L K Sbjct: 543 YLKQLPVDELKVDKSFVLNMSNDESDASIVRATVSLAHDLGLEVVAEGVEDQAAQDELQK 602 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG + +QGY RP P D Sbjct: 603 LGCELIQGYHFARPMPATD 621 >UniRef50_A9KMR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMR9_CLOPH Length = 799 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 119/450 (26%), Positives = 208/450 (46%), Gaps = 31/450 (6%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA-----------PEQEAGKS 351 VC+ + +SE R QA D LT L N ALE+ PE+ + Sbjct: 356 VCIAKDISERKKSEESIR---YQANHDMLTGLSNRYALEKEIQACSNMILLYPEEMS--M 410 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PET 410 F L +D + ++ G I+ + + ++E + L ++ G E ++L+G + Sbjct: 411 FLFLDLDKFKIVNDVCGHHAGDELIKHLTLMMKQNLREQDTLARIGGDEFGVLLNGISQV 470 Query: 411 EGR--LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG---QLSWLAEQS 465 EG +++ + + W +G + + + ++ Q ++++++ Sbjct: 471 EGLEIAENLCETVKKFRFVWEEKVFTLGVSIGAVIINRDLYEVSKVISAADQACYISKEN 530 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEI 522 + L +S +E + QV+ +I A ++ LL Q I +K GY E Sbjct: 531 GGNRVQLFSESEQEFSLREEEMQVM--PSITKAFEENRFLLVYQDIVRVSDKVLSGY-EA 587 Query: 523 LARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF--SVNL 579 L RLK + G +++P FLP ++N D V+ + K H F ++N+ Sbjct: 588 LIRLKDEQGQLVSPGTFLPAAQRYNKLTDIDRWVITNFCKNYDFHQIGSIENDFIYNINI 647 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 ++ + I F+ + + PQ V EITE A SN + I++L K G R A+ Sbjct: 648 SATSINAEGFLEFICHQFEEHQVPPQRVCFEITETSAVSNFVKAKEFIQELKKLGCRFAL 707 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFG+G +++ LK L D IKIDG+ V DI TN +D +V SI ++A + +AE+V Sbjct: 708 DDFGSGLSSFTYLKYLPVDYIKIDGIIVNDIDTNKIDYALVSSINEIAHLMGMKTIAEYV 767 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E + L ++GV Y QG+ +G P+ L++ Sbjct: 768 ENEDIFNCLREIGVDYAQGFWLGEPKGLSN 797 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/251 (33%), Positives = 134/251 (53%), Gaps = 10/251 (3%) Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD--EILAR-LKYDGGIMTPDKFL 539 + K++ L +R A+++ +L L QP N + Y E+L R + + G ++P +F+ Sbjct: 454 AEALKRLELDRWLREAIERNELSLAFQPKVNLKTRDYTGAEVLLRWYRPEQGFISPAEFI 513 Query: 540 PLIAQFNLSARFDLQVL----ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 PL + L + V+ + L +W T P R ++NL + L K + +I Sbjct: 514 PLAEETGLIKELGMWVVRRACQQLSEWRGT-PLSH--IRLAINLSAIQLEDKELVHKIDN 570 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 L + + + P+ + E+TEE N ES+M ++ +L K GFR++IDDFG GY++ LK Sbjct: 571 LLREFDVPPRQLEFELTEEVFIQNIESNMAHLNELIKMGFRLSIDDFGVGYSSLAYLKHF 630 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 IKID FV + TN D +I+ ++ +A +LSVVAE VET+ Q A L K G Sbjct: 631 PISCIKIDRSFVSQLETNADDRVIINAVIAMAHNLNLSVVAEGVETEAQAAYLQKQGCDE 690 Query: 716 LQGYLIGRPQP 726 QGYL +P P Sbjct: 691 AQGYLFAKPLP 701 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 86/247 (34%), Positives = 132/247 (53%), Gaps = 8/247 (3%) Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD-EILARLKY-DGGIMTPDKFLPLIAQF 545 + L + +R AL+ +LLL+ QP+ N +G E L R ++ G++ P +F+P Q Sbjct: 596 RAALESELRLALESDELLLHYQPLVNGDGSMLGAEALVRWRHPQRGLVMPGEFIPAAEQG 655 Query: 546 NLSARFDLQVLE----SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L VLE L+ W + + +VN+ Q + ++++ +R Sbjct: 656 GLIVALGQWVLERACAQLVAWSRSAATAQL--VLAVNVSVRQFRQPDFVDQLLQTLRRSG 713 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 P+ + +E+TE ++ E + +EQL G AIDDFGTGY++ LKRL D +K Sbjct: 714 AQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGTGYSSLAYLKRLPLDQLK 773 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D++T+ DA IVR+I LA++ L VVAE VET Q L + G + QG+L Sbjct: 774 IDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQLKFLQRHGCKAFQGHLF 833 Query: 722 GRPQPLA 728 GRP P A Sbjct: 834 GRPAPAA 840 >UniRef50_C8XJV3 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Nakamurella multipartita DSM 44233 RepID=C8XJV3_NAKMY Length = 659 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 120/439 (27%), Positives = 196/439 (44%), Gaps = 43/439 (9%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQ--EAGKS----FCCLRIDNLEFMSRHYGLMMR 372 R QA D LT L N R L + Q E G + +D L+ ++ +G Sbjct: 181 EERLRHQAFHDELTDLANRRFLVEEITQRLEPGTGDPVGLIFMDVDRLKALNSFFGHAAG 240 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQI------ 426 ++ + L + + +L G E ++++ GP E + + L RQ+ Sbjct: 241 DQYLQILAGRLRERISARHMVARLGGDEFVVIMGGPTDEATARALAEKL--RQVANQPIL 298 Query: 427 -HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + G A G QP GQ S + A +L SR G Sbjct: 299 VGGEEVSRAVSIGVALG---------QP--GQTSASELMNQADQAMLEAKSRGGNEIGVF 347 Query: 486 TKQVLLLNTIRT--------ALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMT 534 + Q+ N IRT A+ G L+L+ QP +R+ G + ++ G++ Sbjct: 348 SAQMRRANEIRTDIELHIGTAIRHGALVLHYQPEVDLRDGRILGVEALVRWPNPTLGLLQ 407 Query: 535 PDKFLPLIAQFNLSARFDL----QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 P F+ ++ NL+ Q L +W +P + G SVN+ P L+ + Sbjct: 408 PGAFIDVVEATNLAGELGRWVLGQACRQLREWQLHYPERRLG--MSVNVSPAQLITLDFV 465 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + + Q + LEITE+ + + ++ + L + G +IAIDDFGTGY+++ Sbjct: 466 ATVAKTLADHELDGQWLTLEITEQALVRDTDQALATLRGLQRIGVKIAIDDFGTGYSSFA 525 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 +LK L AD++KID FV+D+ T+ D IV+SI LA++ L +VAE VET+ + L Sbjct: 526 QLKSLPADVLKIDRGFVRDLGTDFDDLAIVQSIIGLARSLGLDLVAEGVETEIAASTLVD 585 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG QG+L P+P A+ Sbjct: 586 LGCTRAQGFLFAGPRPPAE 604 >UniRef50_C8WNQ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WNQ2_EGGLE Length = 885 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 109/422 (25%), Positives = 200/422 (47%), Gaps = 29/422 (6%) Query: 325 QALTDPLTLLPNFRALEQAPE------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 ++ DPLT L N E Q A S L ID+L ++ Y IR Sbjct: 460 KSKVDPLTGLFNKFEFEDDVRRRMETMQSARISLMVLGIDDLRHINDRYDRAFGDEVIRF 519 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH-MVNILNSRQIHWNNTGLDMGY 437 + + + + E+ ++Y+L G E +++ R + + + RQ Sbjct: 520 VAQRIQSSLPEDARVYRLDGDEFAVIVDDDVDVLRSAYAQLGGMFQRQHDHEGRKFYCTL 579 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 ++ G+ ET + L+ ++ E + H ++ + +++ + +++ L+ +R Sbjct: 580 SGGIAQYPGDAETYESLVKYANYALEHAKGHGKKRCVNFSQPILA-ERVRELELMELLRD 638 Query: 498 ALD---QGDLLLYAQPIRNKEGEGYD-EILARLKYDG-GIMTPDKFLPLIAQFNLSARFD 552 +++ +G L Y + G E LAR + D G ++P +F+PL+ + L Sbjct: 639 SVENGFKGFSLCYQPQVEAATGCVVGAEALARWRCDEYGDLSPLEFIPLLEESGL----- 693 Query: 553 LQVLESLLKWLATHPCD------KKGPRF--SVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 + + W+ H D K P F SVNL L + + I+ + + P Sbjct: 694 ---IVPVGTWVLQHAVDTCKRWRKAIPSFTMSVNLSYRQLDEDGLVPLIVDTLREAELPP 750 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 +++++E+TE + +A+ + +QL G R+A+DDFGTGY++ LK ADI+KID Sbjct: 751 ESLVVEMTESRFADDAQVTHELFDQLRMQGVRVAMDDFGTGYSSLGVLKTSPADIVKIDR 810 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 F++DI T+T DA ++ + +L A +SV E VET ++ ++ +G+ Y+QG+L GRP Sbjct: 811 AFIRDIQTSTFDATFIKFVVELCHAVGISVCLEGVETNEEYEVVGGMGLDYIQGFLFGRP 870 Query: 725 QP 726 P Sbjct: 871 LP 872 >UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains n=1 Tax=Idiomarina loihiensis RepID=Q5QUC0_IDILO Length = 829 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 112/425 (26%), Positives = 194/425 (45%), Gaps = 22/425 (5%) Query: 326 ALTDPLTLLPNFRAL------EQAPEQEAGKSFCCL--RIDNLEFMSRHYGLMMRVHCIR 377 A D LT L N R+L + A +EAG++ + ID + ++ G M ++ Sbjct: 398 AYNDALTGLANRRSLLDHLQDQLATYKEAGQNGALILCDIDKFKILNNTLGSDMGDLLLK 457 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPE-------TEGRLQHMVNILNSRQIHW-- 428 + L + N L +L +E +VL+G E + L + +L+ Q + Sbjct: 458 RVAERLQSSTKANSFLARLSANEFAVVLTGLERGNSVNIKQQLLTRIYQLLDQLQQPYQL 517 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 N+ + A FD ++ + L+ Q S LA + + + +K+ Sbjct: 518 NSYTHLCSFSAGASLFDDSESNAETLMTQ-SGLALSHSKRKGTGEVSLFRQEFADAVSKR 576 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFN 546 V L +R A+ Q + LY QP N E + G + ++ + DG ++P F+PL + Sbjct: 577 VKLEEQLRNAIKQNEFELYLQPQVNIESKPTGAEALIRWKQSDGRFVSPADFIPLAEETG 636 Query: 547 LSARFDLQVLESLLKWLAT--HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L + E + L +K + S+N+ Q ++ L ++Y I P Sbjct: 637 LIVPLGYWITERACQILQQWQQSPEKAKMQLSINVSAKQFQQPEFVEQVQLLVEKYEIRP 696 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE + S I+QL + G A+DDFGTGY++ L ++ D +KID Sbjct: 697 HRLKLELTESLLMDDISSVTNKIKQLKRLGIEFALDDFGTGYSSLSYLMQIPFDTLKIDV 756 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV++++ + A IV +I L ++ L++VAE VET++Q L +L QGYL +P Sbjct: 757 SFVRNMLDSMEKAQIVYTIIQLGESLKLNIVAEGVETEEQFNYLARLNCDTFQGYLFSKP 816 Query: 725 QPLAD 729 P ++ Sbjct: 817 VPESE 821 >UniRef50_Q67KG5 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67KG5_SYMTH Length = 712 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 3/233 (1%) Query: 495 IRTALDQGDLLLYAQPIRN-KEGE-GYDEILARLKYDGG-IMTPDKFLPLIAQFNLSARF 551 +R AL + +LYAQPI + + G E+L RL +GG ++ P FL +F L Sbjct: 448 LREALREDRFVLYAQPILDLRLGRITRVELLLRLVDEGGNVIAPGAFLAGAERFGLIQEI 507 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 D VL ++ +A D + F VNL T+ +A I + P ++LEI Sbjct: 508 DRWVLREAIRLIAQQEPDSEIEAFEVNLSGKTISDPGLARMIQEELEASGADPSKLVLEI 567 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE A + E + I + + G R A+DD G+G+++ LK+L D +KIDG F++++ Sbjct: 568 TETAAIGDLEQARRFITAMRRLGCRFALDDVGSGFSSLRLLKQLPVDYLKIDGAFIRNLP 627 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 T D +VR++ +A+ + +AEFV+ + L+ + GV Y QGYL+GRP Sbjct: 628 TEDADKHLVRAMVAMARTQGQQTIAEFVDRAETLRLVREFGVDYAQGYLVGRP 680 >UniRef50_A6Q1F1 Signal transduction response regulator n=2 Tax=Bacteria RepID=A6Q1F1_NITSB Length = 844 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 108/420 (25%), Positives = 189/420 (45%), Gaps = 29/420 (6%) Query: 326 ALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DPLT L N R E+A S + +DN + ++ YG + Sbjct: 429 ATRDPLTNLYNQRVFWELISYEEERAKRHHYKFSLLVIDLDNFKLVNDTYGHDFGDEFLN 488 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ---IHWN----- 429 I L ++ + + + G E ++VL + +G IL + + IH Sbjct: 489 KIADLLQDCVRPGDIVARYGGDEFVIVLPETDEQGAFIVANRILKNAEKYSIHTPDGKII 548 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC-AHHHVLALDSREEMVSGQTTKQ 488 N L +G D N + L + + + A+ + A + + EE+ ++ Sbjct: 549 NPRLSIGVATCPDHAD-NIKDLFSIADHMMYKAKSAGKAQVKLPTQEDIEELFQEESEIS 607 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD--EILARLKYDGGIMTPDKFLPLIAQFN 546 + L ++ +++ Y QPI N + E + E+LAR +Y ++ F+ + + Sbjct: 608 IFLTEAVKNR----EIIPYFQPILNVKTEKVEAYELLARFRYKDELLPAATFIEVAEKTG 663 Query: 547 LSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 L + DL +LE A + + VNL P L+ + ++ +L K Y I P+ Sbjct: 664 LIFKMDLILLEK-----AFEKMQGRKEKLFVNLSPKALVISDYFLKVNQLVKTYGIDPKN 718 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 ++ EITE N + +L GF AIDDFG+G++++ +K+L D +KI+G F Sbjct: 719 LVFEITERDTVKNFSLLQKFVNELKNSGFNFAIDDFGSGFSSFYYVKQLPIDYVKIEGEF 778 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +K+++ + D V SI L+K + VAEF+E + + +L + Y QGY IG+P P Sbjct: 779 IKNLLVDEKDRAFVESIVTLSKKLGIKTVAEFIEDESILHAIQQLEIDYGQGYYIGKPSP 838 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 113/423 (26%), Positives = 194/423 (45%), Gaps = 31/423 (7%) Query: 326 ALTDPLTLLPNF--------RALEQAPEQEAGK-SFCCLRIDNLEFMSRHYGLMMRVHCI 376 AL DPLT LPN RA+++ ++ + + L +D +F++ +G + + Sbjct: 773 ALHDPLTGLPNRALLLDRIERAIQRRRRNDSYRFAVLMLDLDRFKFINDSHGHTTGDNLL 832 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWN---- 429 + R + P+++ + + +L G E L+L ++ R+ + L + R + Sbjct: 833 VEVARRMRPVVRAGDTVARLGGDEFALLLEDVDSPRRIVQITRRLLAALERPVRMGAKVV 892 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 T +G +D L+ + Q V + + T + + Sbjct: 893 RTSASIGMVLRTQGYDTADALLRDADIAMYQAKAQGKGRFRVF-----NQSMHRHTMEMM 947 Query: 490 LLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDG-GIMTPDKFLPLIAQF 545 L + A+ + L L QP+ +G G+ E L R ++ G + P +F+P+ + Sbjct: 948 TLEGDLSMAMRRKQLYLEYQPVLAVDGARLLGF-EALVRWRHPTEGAVPPARFIPMAEET 1006 Query: 546 NLSARFDLQVLE----SLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L R VLE +L +W AT P SVNL Q N+ GR+ R+ Sbjct: 1007 GLILRIGQWVLEQAAATLARWRATLPG-AHDLYVSVNLSARQASQPNLTGRVARILSDTG 1065 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+A+ LEITE + + ++ +E L + G I IDDFGTGY++ L+R D +K Sbjct: 1066 LPPEALKLEITETAIMKDPDGALQRLEALRRLGVGIGIDDFGTGYSSLAYLQRFPVDTLK 1125 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 +D FV + + + IVR++ L ++ L VVAE VET +Q A++ +LG +QGY Sbjct: 1126 VDRSFVSAVAGDAENREIVRTVVTLGRSLGLHVVAEGVETAEQFAIVAELGCHSVQGYHF 1185 Query: 722 GRP 724 RP Sbjct: 1186 SRP 1188 >UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE71_9SPHN Length = 749 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 123/235 (52%), Gaps = 6/235 (2%) Query: 495 IRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +RTAL GDL L+ QP+ + + GY+ ++ + G++ PD+F+PL Q L Sbjct: 506 LRTALTDGDLRLHFQPLMDLQTNKILGYEALVRWHHPERGLILPDEFIPLAEQTGLIVEL 565 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ P + S+NL P L + ++ I+P + LEI Sbjct: 566 GEWVIREAAATARLLPGELT---ISINLSPAQLRSSQLLATVVSAVAHAGIAPSRLELEI 622 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE ++E M + +L FG RIA+DDFGTGY+++ L+R + IKID FV ++ Sbjct: 623 TEGVFLEDSEDCMRILRELRTFGVRIALDDFGTGYSSFGYLRRFPFNTIKIDRSFVAELR 682 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + IVR+I+DLA +SV AE +E Q ++L LG + QG+L+G+P P Sbjct: 683 ESDDCRRIVRAISDLAHGMGMSVTAEGIEDVSQLSMLRDLGCEVGQGFLLGKPMP 737 >UniRef50_Q12JD4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Shewanella RepID=Q12JD4_SHEDO Length = 755 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 118/422 (27%), Positives = 203/422 (48%), Gaps = 29/422 (6%) Query: 329 DPLTLLPN---FRALEQAPEQEAGKSFCC---LRIDNLEFMSRHYGLMMRVHCIRSICRT 382 D LT LPN F L ++ + C L +D + ++ G + + + Sbjct: 318 DVLTGLPNRVQFELLLDEALKDPDSANACVAFLDLDQFQVINDVSGHQAGDELLCQVAKR 377 Query: 383 LLPLMQENEKLYQLPGSEL-LLVLSGPETEGRL--QHMVNILNSRQIHWNNTGLDMGYGA 439 L L+++ + + +L G E +L+ S + L + + L+ + W ++ Sbjct: 378 LKLLLRKGDVVARLGGDEFGILMYSATQESATLVAKRICLQLSEHEFQWRKVKHNVSVSM 437 Query: 440 AWGRFDGNQETLQPLLGQLSW---LAEQSCAHH-HVLALDSREEMVSGQTTKQVLLLNTI 495 + D N + +L Q+ LA++ + H S+++ + Q+L I Sbjct: 438 GLAKLDKNAGDIYTVLSQIDASCRLAKEEGRNQWHFY---SKDDPQISKLYNQMLASVDI 494 Query: 496 RTALDQGDLLLYAQ---PIRNKEGEGYDEILARL-KYDGGIMTPDKFLPLIAQFNLSARF 551 AL + L+ Q P+ + + E+L R+ + DG ++P FLP ++NL++R Sbjct: 495 TGALALDEFELFYQLIEPLEKADTGLHMEVLLRMVQKDGSYVSPAIFLPAAERYNLASRI 554 Query: 552 DLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTL-LQKNIAGRIIRLFKRYHISPQAV-- 607 D V+++LLKW A + ++ S+NL L+L QK ++ +RL + P+ V Sbjct: 555 DRWVIDNLLKWGANNLATWQQLTMVSINLSALSLGDQKFMSWLEMRLM----VEPELVDK 610 Query: 608 -ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 EITE A S + + I+ L G ++A+DDFG+G++++ LK L D +KIDG F Sbjct: 611 LCFEITETAAVSQLDQATALIDLLQPLGCKLALDDFGSGFSSFAYLKCLDVDFVKIDGQF 670 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V ++ + D IV +I L K V+AEFVE+ + LL LGV Y QGY I +PQ Sbjct: 671 VVNLCQDKSDKAIVAAICQLGKDMEFEVIAEFVESVEVGYLLKNLGVDYAQGYAIAKPQR 730 Query: 727 LA 728 L+ Sbjct: 731 LS 732 >UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YC85_NITMU Length = 951 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 108/425 (25%), Positives = 194/425 (45%), Gaps = 31/425 (7%) Query: 325 QALTDPLTLLPNF----RALEQAPEQEAGK---SFCCLRIDNLEFMSRHYGLMMRVHCIR 377 QA D LT L N R L+Q E++ G + L +D + ++ G + ++ Sbjct: 529 QATHDALTGLINRHEFERRLKQVLERDKGADEHTLLYLDLDQFKIVNDTCGHLAGDELLK 588 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEG-RLQHMV-NILNSRQIHWNNTGLD 434 + L +++++ L +L G E L+L P R+ ++ + + W Sbjct: 589 QLTSLLQAKLRKDDTLARLGGDEFGLLLERCPRGSAFRVAEVLRQTVQEFRFVWEERIFS 648 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL--- 491 +G F G ++T +L +A+ +C LA D V + L Sbjct: 649 LGISIGLATFSGGEQTFSDVL----RMADTAC----FLAKDKGRNRVQLYASDDKNLEKR 700 Query: 492 ------LNTIRTALDQGDLLLYAQ---PIRNKEGEGYDEILARLKYDGGIMTPD-KFLPL 541 + + ALD+ +LY+Q P+ + EIL R+K + G + P F+P Sbjct: 701 RGEMGWVERLHKALDKQRFVLYSQKILPLSAPSSTSHYEILLRMKGENGELVPPMAFIPA 760 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 ++ L + D V+ + A+HP ++NL ++ +++ ++ FK+ Sbjct: 761 AERYGLMPQLDRWVITNAFAQYASHPSRGIKDTCTINLSGASICDEHLYDFVVDQFKQSQ 820 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I P + EITE A +N + I +L + G R ++DDFG+G +++ LK L D +K Sbjct: 821 IDPAGICFEITETVAIANLTQAATLIRKLKELGCRFSLDDFGSGMSSFTYLKHLLVDYLK 880 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 IDG F+K ++++ +D +V +I + + +AE+VE + L K+GV Y QGY I Sbjct: 881 IDGAFIKGMLSDPIDHAMVEAINHIGHVMKIQTIAEWVEEESFLEALRKIGVDYAQGYAI 940 Query: 722 GRPQP 726 P+P Sbjct: 941 EEPRP 945 >UniRef50_D2SEK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SEK4_9ACTO Length = 878 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 113/422 (26%), Positives = 185/422 (43%), Gaps = 38/422 (9%) Query: 326 ALTDPLTLLPNFRALEQAPEQEAG------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 A TDP+T LPN E+ EQ G +S + +D L+ + G + + + Sbjct: 447 AFTDPVTGLPNRAGCERLLEQALGADEPGCRSLLLIELDGLDAVREDAGRDVVTEVLVEV 506 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYG- 438 R L ++ ++ + ++ G ++ EG LQ V++L R + LD G G Sbjct: 507 GRRLRATVRSSDAVTRVGGGAFAVL-----AEGTLQ-AVDLLADRCLSVIEQPLDTGAGV 560 Query: 439 ----AAWGRFD-GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 AA G D G E++ LL + + A AL R + S ++ L Sbjct: 561 FDVSAAIGVVDLGAAESVPDLLTRAELAVRAAGAAGTGTALRYRPALGS-AAERRARLRE 619 Query: 494 TIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 + A D+G+L + QP+ + G + +L + G + P +F+P+ + Sbjct: 620 DLPGAWDRGELSVLFQPVVSLGERRVTGVEALLRWQHPELGEVPPAEFVPIAERAG---- 675 Query: 551 FDLQVLESLLKWLATH--------PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 V+ L +W TH PC R VN+ + + + + + + + Sbjct: 676 ----VIGELQRWALTHAAAAVLTLPCTGAPLRLGVNISASHVAARTLVRDVAAVLQSTGL 731 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 +P+ +ILEITE S E +IE L G +A+DDFGTG ++ L RL D++K+ Sbjct: 732 APERLILEITEATLMSEGEHVAVDIEALRLMGVHVALDDFGTGRSSLAHLTRLPIDVLKL 791 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV + + + S+ +A A L VVAE VET Q L G + QG+L+ Sbjct: 792 DHAFVLRVDRDPKARALCESVVSIAGALGLDVVAEGVETPAQLGALRAAGCGFAQGFLLA 851 Query: 723 RP 724 RP Sbjct: 852 RP 853 >UniRef50_C0CZP3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZP3_9CLOT Length = 915 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 135/241 (56%), Gaps = 4/241 (1%) Query: 493 NTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 + ++ ++ + +Y Q + EG G + ++ +G I+ PD+F+P++ L + Sbjct: 659 DVLKQKIENHEFTVYLQAKIDVEGGRMAGAEALIRYRDENGSIVAPDRFIPVLEDTYLIS 718 Query: 550 RFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 + D V E + K L+ + K G S N +T ++ RI + ++YH+ + + Sbjct: 719 KIDYYVFEEVCKALSAWNQQGKSGITVSSNFSRITFMEDQFVKRIEAISEKYHVQRKYLE 778 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 +EITE ++ ++ + I+Q+ GF +A+DDFG +N L ++ D++KID FVK Sbjct: 779 IEITESAKVTDLDTLVARIDQMRNSGFSVAMDDFGVESSNLAMLSFVKIDVLKIDKSFVK 838 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DIVTN +I+ ++T++ + + ++AE +E +QQ ++ + GV+ +QGYL RP P++ Sbjct: 839 DIVTNKRAQIIIGTMTEMCEEMGIQLIAEGIEDEQQLDVVREYGVKTVQGYLFSRPIPIS 898 Query: 729 D 729 + Sbjct: 899 E 899 >UniRef50_Q21LK5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LK5_SACD2 Length = 587 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 84/286 (29%), Positives = 148/286 (51%), Gaps = 6/286 (2%) Query: 450 TLQPLLGQLSWLAEQS-CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T+ ++G EQ+ A + + + S + Q+ ++ I+ A + L+ Sbjct: 295 TITEIIGAADAACEQAKVAGKNRVHVHKDTRAASEDSRHQMRWVSRIQQAFIEDRFELFF 354 Query: 509 QPI---RNKEGEGYDEILARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QPI + + + E+L R + + ++P+ FLP ++ LS + DL VL + L +LA Sbjct: 355 QPIVALHHSDQYVHYELLIRYRDENNRFVSPNAFLPAAEKYGLSTQIDLWVLTTALDFLA 414 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 ++P K S+NL +L I +L P+ V EITE A N + + Sbjct: 415 SNPEHTYKLQCCSINLSAHSLSSHQTRSAIAQLIIGCGFPPEKVCFEITETSAIKNLDEA 474 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 IE++ G R A+DDFGTG+++ LK L D +KIDG F+++IV + +D +V ++ Sbjct: 475 TAFIEEMKLIGCRFALDDFGTGFSSLGYLKSLNVDYLKIDGAFIRNIVHDKIDHAMVTAV 534 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + K +++ +AEFVE ++ ++ L ++ V Y QG+ +P PL D Sbjct: 535 ASIGKEMNIATIAEFVENEEIKSTLSQMAVDYGQGFGFAKPMPLND 580 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 118/430 (27%), Positives = 201/430 (46%), Gaps = 32/430 (7%) Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQ-------EAGK-SFCCLRIDNLEFMSRHYGLMMR 372 ++H A D LT LPN L+ Q A K + L +D +F++ G Sbjct: 502 KYH--AYFDSLTDLPNRVLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFG 559 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN-ILNS--RQIHWN 429 +R + L + ++ + + G E + L ++E + +VN +++S R H Sbjct: 560 DLLLREVANRLSACVPKSATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLV 619 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL----AEQSCAHHHVLALDSREEMVSGQT 485 + + M F N +T + L+ E S + +H + E + +T Sbjct: 620 DNEIYMKTSIGISIFPDNGDTTEILVKNADTAMYKSKEISGSSYHFFS-----EGMDTRT 674 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKY---DGGIMTPDKFLPLI 542 + + L N + AL+Q +L++Y QP N + + + A +++ + G++ PDKF+P+ Sbjct: 675 FESIKLENDLYKALEQEELVIYYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIA 734 Query: 543 AQFNLSARFDLQVLESLLKWLAT-HPCDKKGP--RFSVNLMPLTLLQKNIAGRIIRLFKR 599 + L VL+ + L H D+ P SVNL L Q ++ + + + Sbjct: 735 EETGLIVPIGEWVLKEACRQLKKWH--DQGSPLISMSVNLSARQLEQSDLFAMVKNVLEE 792 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 +SP+ + LE+TE N ES++ +++L G +AIDDFGTGY++ LK+L Sbjct: 793 VELSPKYIQLELTENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPIST 852 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+D+ + DA I +I LAK +L V+AE VET++Q L +QGY Sbjct: 853 LKIDKSFVQDMTKD--DAAITNTIITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGY 910 Query: 720 LIGRPQPLAD 729 RP D Sbjct: 911 FFSRPMAAED 920 >UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS52_BACS4 Length = 607 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 113/419 (26%), Positives = 195/419 (46%), Gaps = 29/419 (6%) Query: 329 DPLTLLPNFRALEQAP----EQEAGKSF----CCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN E+ E + + F +D +F + G I+SI Sbjct: 178 DTLTGLPNRDKFERDVRSRIEMKHAEKFPFAILFFDLDRFKFYNDTLGHFTGDKLIQSIS 237 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV-NILNSRQIHWNNTGLDMGYGA 439 +TL + + ++Y+ G E ++ P+++ +Q + IL + + ++ G ++ A Sbjct: 238 QTLSSIQHKKVQIYRYGGDEFSVLFHSPKSKEEVQELAQEILLAFESPFHVKGNELYITA 297 Query: 440 AWGRFDGNQETLQPLLG----QLSWLAEQSCAHHHVLALDSRE-----EMVSGQTTKQVL 490 + G + P++G Q+ AE A H+ L + + + +++L Sbjct: 298 SIGI------SYFPVIGVTYDQIIQQAE--MAMHYAKELGKGDFQWYQSSIRTEHDEKLL 349 Query: 491 LLNTIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + +R A++Q + LY P I KE + G + +L G ++P KF+P+ + L Sbjct: 350 MEKRLRIAMEQENFELYYHPQIDLKENKVIGVEALLRWNDEQLGKVSPYKFIPIAEETGL 409 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 + VLE + R +N+ P + + ++ + +SP+ + Sbjct: 410 INQIGDWVLEKACIQAKKWNNEGHELRIGINISPQQFQRPDFVSKVKNTLDKTGLSPKLL 469 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LEITE N + + + +L +FG I+IDDFGTGY++ L+R D +KID F+ Sbjct: 470 DLEITENDLLYNRDECLKTLYRLKQFGVSISIDDFGTGYSSLSYLRRFPIDTLKIDQSFI 529 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 K++V NT D IV SI LA L V+AE VET + A L+KL +QG+L +P P Sbjct: 530 KEVVDNTNDQAIVTSIIQLAHNMKLRVIAEGVETSEMVAFLNKLSCDEMQGFLYSQPLP 588 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 116/430 (26%), Positives = 204/430 (47%), Gaps = 37/430 (8%) Query: 326 ALTDPLTLLPNFRALEQ------APEQEAGKSFCCLRID--NLEFMSRHYGLMMRVHCIR 377 A DPLT LPN R L A +G+ L ID N + ++ G + ++ Sbjct: 712 AFYDPLTHLPNRRLLVDRLQHALASSTRSGREGALLFIDLDNFKTLNDTLGHDIGDLLLQ 771 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVL---------SGPETEGRLQHMVNILNSRQI-- 426 + L ++E + + +L G E +++L + +TE + ++ LN + Sbjct: 772 QVALRLASCVREGDTVARLGGDEFVVMLEELSEQTLEAAAQTESIGEKILLTLNQPYLLA 831 Query: 427 --HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ--LSWLAEQSCAHHHVLALDSR-EEMV 481 + N+ GA F ++++ LL Q ++ + + + D + +E V Sbjct: 832 AHEYRNSP---SIGATL--FGNKPQSIEELLKQADIAMYQAKKAGRNTLRFFDPQMQETV 886 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFL 539 + LL + AL+ LY Q E G + ++ + + G++ P+ F+ Sbjct: 887 ----IARALLERELSKALENDQFQLYYQIQMTDLNEPFGAEALIRWIHPERGLIPPNHFI 942 Query: 540 PLIAQFNLSARFDLQVLESLLKWLA--THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 PL + L L VL++ + + +VN+ + Q + +I + Sbjct: 943 PLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNVSARSFFQDDFVTQIQTVL 1002 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 +R+ I+P+ + LEITE ++ E ++ + L K G + A+DDFGTGY++ + LKRL Sbjct: 1003 QRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDFGTGYSSLQYLKRLPL 1062 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV+DI T++ D IV +I +A + +L V+AE VET+QQ+ LL + G Q Sbjct: 1063 DQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETEQQRQLLIESGCSQYQ 1122 Query: 718 GYLIGRPQPL 727 GYL G+P P+ Sbjct: 1123 GYLFGKPAPI 1132 >UniRef50_C6XCG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCG6_METSD Length = 674 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 82/256 (32%), Positives = 136/256 (53%), Gaps = 22/256 (8%) Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARL-KYDGGIMTPDKFLPLIA 543 +++ +N + AL++ LY Q I N+ + EIL RL +GG++ F+P Sbjct: 424 EEIQWVNRLELALEENRFSLYCQRILPLNENSGIHGEILLRLPDGNGGMIPAGAFMPAAE 483 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII--RLFKRYH 601 +F++++R D V + +L WL H + + +L NI+G+ I R F Y Sbjct: 484 RFHITSRIDRWVTKRVLHWLMQH---------EHVIDHIDVLSVNISGQSIGDRAFHDYM 534 Query: 602 I-----SP---QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + +P + EITE A +N + I + +FG R ++DDFG+G +++ LK Sbjct: 535 LELIVSTPATYSKLCFEITETAAITNLADANSFIASMRRFGIRFSLDDFGSGVSSFGHLK 594 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L D +KIDG F++ I +N +D +VR I ++A L +AE+VET + + LL +G+ Sbjct: 595 NLDVDYLKIDGQFIRAIDSNVIDQAMVRCICEIANGTGLKTIAEYVETVEVENLLRGMGI 654 Query: 714 QYLQGYLIGRPQPLAD 729 Y QGYL +P PL + Sbjct: 655 HYTQGYLRHKPAPLDE 670 >UniRef50_B0BZ23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZ23_ACAM1 Length = 964 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 112/457 (24%), Positives = 207/457 (45%), Gaps = 32/457 (7%) Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 +G++ + + + L I++ + + +RSE+ +R L + + L Sbjct: 519 RGIQRDITEEYFLTKKIAYQAAYDSLTNLLNRSEFDSR------LQESVNL--------- 563 Query: 343 APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 A E + C L +D + ++ G ++ + + L ++ ++ L +L G E Sbjct: 564 AKEDDTQYVLCYLDLDQFKLVNDTAGHIVGDQLLTDLAHLLKQKLRPDDVLGRLGGDEFG 623 Query: 403 LVLSG---PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L++ E + + +V + + + W ++ +G F + + LL + Sbjct: 624 LLMQDCTLEEAQAFCEKLVTQVQNFRFQWRDSQFRVGVSVGIVAFADASYSAEELLSRAD 683 Query: 460 ---WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG 516 + A+ S +A + E+ Q Q+ + I A+++ L L QPI++ Sbjct: 684 LACYKAKDSGRGRVYVANQNDRELDHFQL--QMAHIADIPQAIEEERLFLVKQPIQSIRQ 741 Query: 517 ----EGYDEILARLKYDG--GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + EIL RL+ DG I+ P F+P ++ + A D VLE+ L + C Sbjct: 742 PTSLHRHYEILLRLR-DGKNNIIGPGLFIPAAERYGVIALIDHWVLENTLDQY--YQCGL 798 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + S+NL ++ ++I L + + P + +EITE + + ++ IE L Sbjct: 799 EDEMVSINLSGASINDDRATAKVIALITQSSVPPSNICIEITETATIAQLDQALRFIESL 858 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G + A+DDFG+G ++ LK L D +KIDG +K+I D I+ I +LA + Sbjct: 859 KDIGVKFALDDFGSGVSSLSYLKSLPVDYLKIDGSLIKNIAVVESDREIIYLINELAHKR 918 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + +AEFVE +Q L +GV Y QGY IG+P+PL Sbjct: 919 GMKTIAEFVENEQILEQLRIIGVDYAQGYGIGKPEPL 955 >UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 Tax=cellular organisms RepID=Q1LGY0_RALME Length = 536 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 90/242 (37%), Positives = 125/242 (51%), Gaps = 6/242 (2%) Query: 491 LLNTIRTALDQGDLLLYAQPIRNKEGEGY--DEILARLKYDGGIMTPDKFLPLIAQFNLS 548 LL + AL +L L PI E + E L R +DG + PDKF+PL + + Sbjct: 276 LLRQLDRALRDDELSLAYMPIVELESGKWIGAEALMRWCHDGQWIAPDKFIPLAERHHRI 335 Query: 549 ARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 + ++L+ L+ P D + FSVNL L IA R+ + R V Sbjct: 336 RKLTNRMLDLLVADAQALPRDLARAMYFSVNLSAEDLAACAIAQRVADV--RQACGVDGV 393 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 ++E TE A + NIE+L K G R+AIDDFGTGY++ L L D IKID FV Sbjct: 394 MVEATE-GVLLEASRVIPNIERLRKLGIRVAIDDFGTGYSSLSYLGSLDVDYIKIDKSFV 452 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 I TN++ +V I D+AK ++V+AE VETQ+Q L GV+Y QG+L G+ P+ Sbjct: 453 SAIGTNSVRGHVVAHIIDMAKDVGVAVIAEGVETQEQADYLMARGVRYAQGWLFGKAMPM 512 Query: 728 AD 729 D Sbjct: 513 QD 514 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 81/249 (32%), Positives = 133/249 (53%), Gaps = 4/249 (1%) Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 +T + V L +R A+++G++ L+ QP ++ E G + +L G ++P +F+P Sbjct: 639 RTLRHVQLTGALRGAVERGEMQLHYQPQVDLQTGELSGVEALLRWTHPLFGAVSPGEFIP 698 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L VL + + LA D P +VNL L +A +I + Sbjct: 699 LAEESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSVLQFNLPGLAQQIASILSE 758 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P +E+TE A + E+++ I++LH G ++++DDFGTGY++ LKR + D Sbjct: 759 AGVPPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGYSSLAYLKRFRLDR 818 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KIDG FV+D ++ D IV +I +A++ L+ VAE VET Q ++ LG +QGY Sbjct: 819 LKIDGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLEVIRALGGDAVQGY 878 Query: 720 LIGRPQPLA 728 I RP P A Sbjct: 879 WISRPLPAA 887 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 110/421 (26%), Positives = 191/421 (45%), Gaps = 30/421 (7%) Query: 326 ALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A DP+T LPN A+ +A G + L +D + ++ G M +R Sbjct: 527 AYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSLGHAMGDQLLR 586 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV-----NILNSRQIHWNNTG 432 + LL ++ ++ + +L G E ++++S + + + +V + QI + Sbjct: 587 LVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEVY 646 Query: 433 LDMGYGAAWGRFDGN--QETLQPL---LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 G + DG +E L+ + Q +C H L+ R T+ Sbjct: 647 TSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTC-HFFSPELNMR-------ATE 698 Query: 488 QVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++LL +T+R AL++ + L QP +R+ G + +L D G++ P+ F+P+ + Sbjct: 699 RLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIAEE 758 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL + + + P R +VN+ Q+N+ RI ++ + Sbjct: 759 TGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILMETGLD 818 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P + LE+TE N E ++ + QL K G ++IDDFGTGY++ LK D +KID Sbjct: 819 PALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRLKID 878 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FVK + + DA I +I LA + L+VVAE +E +Q +H+ +QGY + R Sbjct: 879 RSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSR 938 Query: 724 P 724 P Sbjct: 939 P 939 >UniRef50_A3J8I8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8I8_9ALTE Length = 1020 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 118/434 (27%), Positives = 195/434 (44%), Gaps = 29/434 (6%) Query: 320 RRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMM 371 R H A D LT L N LE+ Q + + ++ L ++ G Sbjct: 590 REAHRLAFYDSLTGLANKALLEERLSEVCKANTRQNTHAALLYVDVEQLRSVNDARGYEF 649 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG--PE-------TEGRLQHMVNILN 422 +++I L +++E++ L ++ G E ++LS P TEG +++ Sbjct: 650 GDLVLKAIAEQLGTMVRESDTLARIGGDEFAILLSNLNPSQDVAARVTEGVADKVLDAF- 708 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR----E 478 +R I + + DG + L Q + A Q L + R + Sbjct: 709 TRPIEVLQQKIQVNISIGITLIDGRSSPVDQQL-QRAEQATQQAKEQAKLRGEKRISFFD 767 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGE-GYDEILARLKYDG-GIMTP 535 + Q + VL+ +R AL + L+LY QP IRN GY E+L R ++ GI++P Sbjct: 768 PEIQAQVVQHVLMEEELRNALAEEQLVLYYQPQIRNPNQLLGY-EVLLRWRHPKRGIVSP 826 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS--VNLMPLTLLQKNIAGRI 593 F+P+ Q L ++E + LA + S VN+ + N ++ Sbjct: 827 AVFIPIAEQSRLILPIGRWIIEQACEKLAAWQSEPTTSELSLAVNVSIIQFQSNNFVEQV 886 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ ++ P+ + LE+TE ++ E + +L G R ++DDFGTGY++ L Sbjct: 887 GQILEKTGAPPRLLKLEVTESLLMNDPERITEMMNRLRSMGVRFSLDDFGTGYSSMSYLN 946 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 +L D IKID F+ ++ N + IV SI LAK +L V+AE VET++Q+ L G Sbjct: 947 QLPLDQIKIDQSFINEVANNLASSAIVESIIGLAKGLNLEVIAEGVETEEQRNWLANHGC 1006 Query: 714 QYLQGYLIGRPQPL 727 Q QGYL GRP+ + Sbjct: 1007 QNFQGYLFGRPEEI 1020 >UniRef50_A2SC87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SC87_METPP Length = 816 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 121/419 (28%), Positives = 196/419 (46%), Gaps = 20/419 (4%) Query: 326 ALTDPLTLLPN---FRA-LEQAPEQEAGKSFCC----LRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN FRA L A + ++ C L +D + ++ G ++ Sbjct: 374 AFEDGLTQLPNREQFRADLRAAIQHAQARNEPCAVLMLDLDRFKHVNDVLGHRFGDRLLQ 433 Query: 378 SICRTLL-PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--RQIHWNNTGLD 434 + + L + N+ + +L G E +++ + L I + R I ++ +D Sbjct: 434 EVAKRLTQEARRSNDVVARLGGDEFAMLMPSADIALALGIAQRIQRAFERPISLDDHTVD 493 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQS--CAHHHVLALDSREEMVSGQTTKQVLLL 492 +G G + L+ + AE + A H L + + + + + + LL Sbjct: 494 LGAGIGIACCPAHGVEADTLVSR----AELAMYAAKQHQLGVKVYDAALDMSSDESLSLL 549 Query: 493 NTIRTALDQGDLLLYAQP-IRNKEGEGYD-EILARLKY-DGGIMTPDKFLPLIAQFNLSA 549 + +RTA+D+ L LY QP I G E L R ++ G++ P KF+P Q Sbjct: 550 SELRTAVDRDQLRLYLQPKISLATGAVLGAEALVRWQHPQRGLVPPGKFIPFAEQTGFIR 609 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 ++E L + SVNL LL +++ ++ RL ++P ++ L Sbjct: 610 VLTGWMIERSAMVLRQMNAGAPALKISVNLSTRDLLDQDLPAKMQRLIDTLALNPGSMCL 669 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE + + ++ +E+LH GF+++IDDFGTGY++ LKRL D +KID FV + Sbjct: 670 EITESAIMDDPQRALQTLERLHAMGFKLSIDDFGTGYSSLAYLKRLPVDELKIDQSFVFN 729 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + DA IVRS DLA L+VVAE +ET + LL LG QGY + +P P A Sbjct: 730 MERDLDDAKIVRSTIDLAHNLGLNVVAEGIETAKAWKLLQALGCDEAQGYFVAKPMPEA 788 >UniRef50_Q30UE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=Q30UE4_SULDN Length = 1002 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 116/434 (26%), Positives = 197/434 (45%), Gaps = 47/434 (10%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLM 370 I H+ E+ + A TD LT N L ++ S +DN ++ YG Sbjct: 592 IRHKEEF-----EIAAKTDSLTGCGNRLRLHYDMQENEKLSVAIFNLDNFRQINDFYGHN 646 Query: 371 MRVHCIRSICRTLLPLMQ--ENEKLYQLPGSELL-LVLSGPETEGRLQHMVNILNSRQIH 427 I++I + +Q +N K Y+L G E + L ++ P+ E L+ IL + Sbjct: 647 FGDLVIQTIASKINMYIQHDKNFKFYRLQGDEFVTLAINAPKDE-LLEKTKGILKLIKKK 705 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD------------ 475 + + GN+E L +S+ ++ +AL Sbjct: 706 F---------------YIGNEELLISCSAGISFEEKEHLLSTANMALKITKKSSTDFLIY 750 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI-----RNKEGEGYDEILARLKYDG 530 S E + Q + + +A+ + +L+ + QPI N+E E L R+ +G Sbjct: 751 SSEISLEDQYKNNLNWAKKLSSAIKENNLVTFYQPIINNSIDNRENPTKYECLIRIVDNG 810 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 I++P FL + Q + V++ + K FS+NL L +L+ Sbjct: 811 KIISPFFFLEVAKQTRQYSEITKTVVKQSFELFKD-----KHAHFSINLSVLDILEPRTT 865 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + K+Y I + VI EI E ++ N ES + I+++ +G +IAIDDFGTGY+N+E Sbjct: 866 TYIFEMLKQYGIGER-VIFEIVESESIDNFESIVAFIDKVKSYGCKIAIDDFGTGYSNFE 924 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L +L+AD +KIDG +K++ + ++V +I + +K + VAEFVE ++ ++ + Sbjct: 925 YLIKLRADYLKIDGSLIKNLDKDKNALLVVSTIVEFSKKLGMKTVAEFVENREIFDIVRE 984 Query: 711 LGVQYLQGYLIGRP 724 LGV Y QGY P Sbjct: 985 LGVDYSQGYYFSEP 998 >UniRef50_Q2L0X8 Putative signaling protein n=1 Tax=Bordetella avium 197N RepID=Q2L0X8_BORA1 Length = 691 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 77/246 (31%), Positives = 136/246 (55%), Gaps = 4/246 (1%) Query: 485 TTKQVLLLNTIRTALDQGDL-LLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPL 541 + + V +L +R+A+D+ +L L Y I G+ G + +L G + PD+F+P+ Sbjct: 433 SDRPVRVLEQLRSAIDKDELRLFYQAKIDAATGKRVGVEALLRWQNKALGYVAPDEFIPV 492 Query: 542 IAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 Q ++ + +L+ + + LA D P ++N+ + Q ++A + + KR+ Sbjct: 493 ADQNHMILPLQVWMLDEVCRQLADWDKVDAAIPTVAINIPEVQFQQPHLADSLAIVLKRH 552 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 ++ +ILE+ E A +A S+ +++LH G ++I DFGTGY++ L+R A + Sbjct: 553 NLQANRLILEVAETTAMKHAAQSVKIMQRLHAMGIGLSIGDFGTGYSSLPYLRRFPASEL 612 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID + + T + + +V +I +A+A L+VVAE VET+ Q+ L +LG LQGYL Sbjct: 613 KIDRSLIHGLGTASGETSVVTAILAMARALRLTVVAEGVETEAQRQKLTELGCDVLQGYL 672 Query: 721 IGRPQP 726 +GRP P Sbjct: 673 VGRPAP 678 >UniRef50_Q1K3N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3N9_DESAC Length = 657 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 16/251 (6%) Query: 486 TKQVLLLNTIRTALDQGDLLLYAQ---PIRNKE--GEGYDEILARLKYDGGIMTPDKFLP 540 +Q+ L IR AL + L Q P+ N E + Y+ +L+ DG + P++FL Sbjct: 394 NRQIRALPFIREALHRNLFFLRRQKICPVGNVEPHSDCYEVLLSMQLADGSSLAPEEFLT 453 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLF-- 597 +++L D V+ WL ++ G R+ +++ M + L K+ + Sbjct: 454 AAERYDLMPSIDRWVINHCFDWL-----EEDGERWKNLDFMAINLSGKSFNDPTFLAYLE 508 Query: 598 ---KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 +R + + EITE A N E S+ I ++ +FG R A+DDFG+G +++ LK Sbjct: 509 TKLRRATFPAEKICFEITETAAVENEERSVTFIHRIKRFGCRFALDDFGSGMSSFRYLKN 568 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D+IKIDG F+ D+V N L IV SI ++A A L VAE E QQ +L ++GV Sbjct: 569 FPVDVIKIDGSFIVDMVENELSREIVTSIHNIASALGLKTVAEHAEDQQTLQVLQEIGVD 628 Query: 715 YLQGYLIGRPQ 725 Y+QGY++ +P+ Sbjct: 629 YVQGYVVEKPK 639 >UniRef50_A8UQN5 Tyrosyl-tRNA synthetase n=2 Tax=Aquificaceae RepID=A8UQN5_9AQUI Length = 844 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 120/421 (28%), Positives = 198/421 (47%), Gaps = 31/421 (7%) Query: 326 ALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A+ D LT L N R LE+A S L +DN + ++ YG + +R Sbjct: 431 AMRDSLTFLYNQRTFWELFNYELERAERFGRKLSLMLLDLDNFKVINDTYGHVFGDTVLR 490 Query: 378 SICRTLLPLMQENEKLYQLPGSEL-LLVLSGPETEG-----RLQHMVNILN--SRQIHWN 429 + R + ++ + + G E LLV+ TE R++ + L + + Sbjct: 491 EVGRIIYEKKRKADVAARYGGDEFALLVVGAGVTEAYSLAKRIKEAIENLTFIAEEDKVI 550 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA-EQSCAHHHVLALDSREEMVSGQTTKQ 488 N + +G + + N L L L A E+ + V + + ++ S T K Sbjct: 551 NVEVSIGI-STFPDHAKNPRDLFILADNLLRKAKEEGRSRLKVPSYEDLSKIGSFLTEKS 609 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN-KEGEGY-DEILARLKYDGGIMTPDK-FLPLIAQF 545 + +L+ AL++ +++ Y QPI + GE + +E L R+ G P F+ Sbjct: 610 IQILD----ALNKREIVPYFQPIVDLNTGEVFANEALMRI---GKHRLPAAAFIEAAENL 662 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 + R DL + E + K + KK +N P LL ++ + R+ L + ISP Sbjct: 663 GVLVRMDLILYEEVFKKIKEQGYKKK---IFLNFSPRVLLLEDFSSRLSSLVEGLGISPG 719 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 V+ E+TE ++ N E ++ + + GF+ AIDDFG+GY+++ LKR+ D +K++G Sbjct: 720 NVVFELTERESVRNIELLEKFVKVMKENGFKFAIDDFGSGYSSFYYLKRVPVDYVKMEGE 779 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FVKDIV++ D + SI LAK + VAEFVE + L +LGV Y QG+ G+P Sbjct: 780 FVKDIVSDWRDRSFIASIVALAKGMGIKTVAEFVEGEDILNYLRELGVDYGQGFYFGKPS 839 Query: 726 P 726 P Sbjct: 840 P 840 >UniRef50_C7RRQ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RRQ6_9PROT Length = 1014 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 118/433 (27%), Positives = 191/433 (44%), Gaps = 27/433 (6%) Query: 318 LNRRWHLQALTDPLTLL---PNF-----RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGL 369 L R+ A D LT L P F RA+ A + A C L +D + ++ G Sbjct: 579 LARQLAHDATHDALTGLINRPEFERRLQRAVTSARQDGARHVLCYLDLDQFKVVNDTAGH 638 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGRLQHMVNILNSRQIHW 428 ++ I L + +E++ L ++ G E L+ P + N R+ + Sbjct: 639 AAGDELLQQINTILAGMFRESDTLARIGGDEFALLQENCPLDRAYAIAQSVVRNVREHRF 698 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD-----SREEMVSG 483 N G G + G ET + QL A+ +C L + R + S Sbjct: 699 NWQGRSYQIGVSIGLVPITAETQDTV--QLLTEADIACYTAKELGRNRVHVYQRTDSESV 756 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD----EILARLKYDGG------IM 533 Q ++L +R ALDQG L+ QPI +G + E L R+ + G ++ Sbjct: 757 QRHSEILGAAGLRDALDQGLFRLHYQPIVALQGPDFRTVRYEALLRVAHPGNTQRKGELV 816 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRI 593 P F+P ++NL D V+++ + A + G R ++NL +L +++ I Sbjct: 817 LPAAFIPAAERYNLMGAIDRWVIQAAFREYA-NGVGLGGARLAINLSGNSLSDESLLAFI 875 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 F + P+ EITE A N ++ + L G +A+DDFG+G +++ LK Sbjct: 876 ESQFVEHAFPPERACFEITETAAIQNLGPALGLMAALKGHGCHLALDDFGSGLSSFHYLK 935 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 L D +KIDG FVKD+ + D +V +I ++ A + VAE+V ++ L +LGV Sbjct: 936 TLPVDYLKIDGSFVKDMCEDPRDDALVAAINQMSHAMGIQTVAEYVCSESIAERLCELGV 995 Query: 714 QYLQGYLIGRPQP 726 Y QGY G+P P Sbjct: 996 DYAQGYFFGKPMP 1008 >UniRef50_Q2BRD7 Two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRD7_9GAMM Length = 709 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 171/713 (23%), Positives = 305/713 (42%), Gaps = 77/713 (10%) Query: 63 GVVPVLC-GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV 121 G+V +L G+ T+ F+ S+ T Q V+ A + L + G S V Sbjct: 14 GLVAILALGILATSSLAFYFSYQDTLAGKKDQIRSVVQATSSQVIALRSEKAAGNISENV 73 Query: 122 WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNM 181 + L+ + S Y+ D + + + + F + +L SL M Sbjct: 74 YNNRLR-NLINDVSYGHSGYIYLMTQDLRVHLHPKRPELEG-FLISELPSLSHP----QM 127 Query: 182 LFYYLTRMIVSP---HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 + ++I SP HF ++ W + PS G T + L S L+L Y +D Sbjct: 128 MIDGFKQVISSPSGSHFWELYWPK---PSGGPSVAKLTYAELIPESNLILGTGI-YIDDL 183 Query: 239 IAGYLVPVF-FIIFTLGVG------------KLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + Y+ F ++I T+ V + P +L+ ++ + + +Q L Sbjct: 184 VPLYIQRAFSYLIITIVVLCAALLTAALISRNIVRPIASLSKQMNDVAHDDIDQEILY-T 242 Query: 286 ETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT--DPLTLLPNFRALEQA 343 E + + + L F L+ R+ + E H+Q L DP+T L N RA+ +A Sbjct: 243 EQQDEIGSMARALEHFREHLIENKRLRYMQE------HVQFLENFDPVTRLYNRRAMGEA 296 Query: 344 PEQEAGKSFCC--------LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 E+E ++F +R+D L ++ G R + L + N L + Sbjct: 297 LEREVIRNFESQEHVYFLFIRLDLLRNLTIELGDEQRDQILIETANRLRQRLSVNHSLGR 356 Query: 396 L-PGSELLLVLSGPETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRF--DGNQET 450 L G L+++ P+ +L++ + I ++ + + F DG+Q+ Sbjct: 357 LSEGCFGLMIIDKPDDVDLDSLTTELLHTLEQPIQLDSIQIQIAARIGITSFPEDGDQQF 416 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREE-------MVSGQTTKQVLLLNTIRTALDQGD 503 L+G+ A+ + RE+ + Q +++ L + A++Q Sbjct: 417 --ELIGRAEIAAKTA---------KKREQGWLYFNQIRDTQVKQKMELWQDLSIAMEQDQ 465 Query: 504 LLLYAQPIRNKEGEG--YDEILARLKY-DGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 L QP+ + E E L R + + G ++P F+PL Q L +R D VL ++ Sbjct: 466 FYLVFQPLFDLESNTPLSAETLLRWTHPEHGPISPATFVPLAEQSGLISRLDHWVLNAVA 525 Query: 561 K----WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + WL + PR ++NL ++ L+ + R+ FK +++ + LE+TE Sbjct: 526 RQCRLWLDN---ELTLPRIAINLSGISFLRNDFEQRLTNTFKAHNVPLHHIELELTEGVL 582 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + ++++ G ++IDDFGTGY++ R+K L D IKID F+ DI N D Sbjct: 583 IEDLARIQEKLQRVRDMGISVSIDDFGTGYSSLSRIKNLPVDHIKIDKSFIDDIDKNPQD 642 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV++I +A+ L VVAE VET++Q ++L + +QGYL+ RP + D Sbjct: 643 LKIVQAIILMAQGLQLKVVAEGVETEKQLSILREEHCDVVQGYLLSRPLSVED 695 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 128/441 (29%), Positives = 206/441 (46%), Gaps = 32/441 (7%) Query: 310 RIYHRSEWLNRRWHLQALTD-PLTLLPNFRALEQAPE--QEAGKSFCCL--RIDNLEFMS 364 R+ L R H ALTD P +L N R L E Q +G+ L ID + ++ Sbjct: 379 RMKETEARLQRLAHYDALTDLPNRVLLNLR-LAHGVERVQRSGEMLAVLFLDIDRFKNVN 437 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL----SGPETEGRLQHMVNI 420 G + + I R L ++ + L +L G E +++L S + Q ++++ Sbjct: 438 DSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSANDVADFAQEIIDL 497 Query: 421 LNSRQIHWNNTGLDMGYGAAWG----RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 LN Q +G ++ GA+ G D + T Q + + L + A +V + Sbjct: 498 LN--QSFQLASGQEVFVGASIGISLYPLDTDDAT-QLISNADAALYQAKEAGRNVYRFYT 554 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-KEGEGYD-EILARLKY-DGGIM 533 + ++ +++ L +R L++G+ +L+ QP+ +GE E L R + G++ Sbjct: 555 AD--LTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMI 612 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLK----WLATHPCDKKGP-RFSVNLMPLTLLQKN 588 P +F+PL + L VLES + WL C + P +VNL + Sbjct: 613 APLRFIPLAEETGLIVPLGEWVLESACRQGREWL---DCGR--PLTIAVNLSTRQFRAGD 667 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + R + LEITE +A+ ++ + L G R++IDDFGTGY++ Sbjct: 668 LTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSS 727 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR D +KID FV+DI + D MIV ++ +A L V+AE VET +Q A L Sbjct: 728 LAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFL 787 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 LG + QGYL+GRPQ AD Sbjct: 788 RSLGCEAYQGYLVGRPQAAAD 808 >UniRef50_Q98I63 Mlr2546 protein n=1 Tax=Mesorhizobium loti RepID=Q98I63_RHILO Length = 518 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 108/423 (25%), Positives = 198/423 (46%), Gaps = 40/423 (9%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMS----RHYGLMMRV 373 + RR+ L+AL D L + + R EA + + +D+ + ++ +G + V Sbjct: 103 MTRRYFLEALRDSLGTMRDRR--------EA--TLLLIDVDHFKQLNDTFGHQFGDLALV 152 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG---RLQHMVNILNSRQIHWNN 430 H +++ R M + +L G E +++ + ++ +++ + + + H Sbjct: 153 HLVKTSERVFADGM-----VGRLGGDEFGVIIPHGDLAAINKDIRQLLDTMRAGKSHEGK 207 Query: 431 T-GLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 T L + G A + L+ L+ ++ V D EEM+S + ++ Sbjct: 208 TIPLSISVGVALAPAHASNTAELMLVADLALYESKAAGRGRVTVFD--EEMLSDKRYRR- 264 Query: 490 LLLNTIRTALDQGDLLLYAQPIRNKEGEGYD-EILARLKYD-GGIMTPDKFLPLIAQFNL 547 L+ +R A+ G+L L+ QPI N +G Y E L R ++ G+++P +F+P+ + L Sbjct: 265 LVERELRAAVYLGELELHYQPIVNPDGSAYALEGLIRWRHPVRGLISPAEFIPIAERSTL 324 Query: 548 SARFDLQVLESLLKWLATHPCDK----KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 ++ L +W+ C G R S+N+ L + I R+ + S Sbjct: 325 --------IDMLGEWVFKRACADVGHFPGRRISINVSGEQLKRDEIVTMCDRVLRETGRS 376 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 I+EITE A + ++ +E L GF IA+DDFGTG+ + LK L D IKID Sbjct: 377 ATQFIIEITETVATAATPETLRRLEALRGLGFHIALDDFGTGHCGFNYLKTLPIDSIKID 436 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 +++ + + + + V ++ +A+ + +++VAE VETQ++ AL G QGY GR Sbjct: 437 RSYIRSLAHDQVAQIFVSALAQIARIQDVTIVAEGVETQEEFALARAAGCNRFQGYFFGR 496 Query: 724 PQP 726 P P Sbjct: 497 PAP 499 >UniRef50_Q21N07 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21N07_SACD2 Length = 855 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 116/427 (27%), Positives = 189/427 (44%), Gaps = 41/427 (9%) Query: 326 ALTDPLTLLPNFRALEQA-------PEQEAGK-SFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A TD LT LPN A + E+ GK + + +D+ + ++ YG + I Sbjct: 423 AFTDELTSLPNRLAFSKKLKNTMKLAEKYHGKVAMLIVDLDHFKDINDSYGHPVGDSLIC 482 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHW--------- 428 + L ++ +E L ++ G E L+L + H + SR+I Sbjct: 483 EVVTRLKEVLVGDEYLARIGGDEFALILDNVRS-----HDAALHYSRRIQKIMAEPIYLM 537 Query: 429 ----NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 N + MG F + E L+ Q+ L ++E S Sbjct: 538 EGPVVNARVSMGVAL----FPDDGEDAVALIKAADLAMHQAKKSGRNTVLPYKQEY-SSS 592 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPL 541 K++ L +R+A+ +L+LY QPI + E G + +L + G ++P F+P+ Sbjct: 593 LEKKIFLEEELRSAIRDEELMLYYQPIIDLSTEKIVGCEALLRWIDRAGKFVSPVDFIPV 652 Query: 542 IAQ----FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 + + L + + L W H D K SVN+ P L + I RL Sbjct: 653 AEESGLIYELGNWINATAFKQLKLWQTLH-TDMK--YISVNVSPHQLQNADFVKDIQRLL 709 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 +++ P+ + LEITE + ++ + L + GFR+AIDDFGTGY++ LKR Sbjct: 710 DIHNVDPRHIQLEITEGTFLQESLNTQSQLRILGEMGFRLAIDDFGTGYSSLAYLKRFAV 769 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D+IKID FV D+ + D IV++I + + + E VET++Q ++ LG Y Q Sbjct: 770 DVIKIDRSFVMDLEDDPADRDIVKAIIAMTTSLGFDTLVEGVETREQSLIVGALGCGYGQ 829 Query: 718 GYLIGRP 724 GYL G+P Sbjct: 830 GYLYGKP 836 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 118/453 (26%), Positives = 213/453 (47%), Gaps = 36/453 (7%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQE 347 A + S V + + + RSE + QA D LT LPN + A+ A + + Sbjct: 453 AGIPSHYVAIFHDISEIKRSE---EKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHK 509 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L IDN ++++ G ++ I LL ++ + +L G E ++++ Sbjct: 510 TKLAVIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILM-- 567 Query: 408 PETEGRLQHMVNILNSR-----QIHWNNTGLDMGYGAAWGR--FDGNQETLQPLLGQLS- 459 PE E H + +L R ++ +G D + G F + +T + L+ Sbjct: 568 PEIED--PHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADI 625 Query: 460 --WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE 517 + A+++ + + L + ++ + +++ L + AL + + +L+ QP + E E Sbjct: 626 AMYRAKEAGKNGYQLFTAAMQQTI----MQRIELEARLSDALCRNEFVLFYQPQVDLESE 681 Query: 518 ---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 G + ++ K DG ++ PD+F+P+ + L + D VL++ + A ++ G Sbjct: 682 HVIGAEALIRWQKPDGQLVYPDEFIPIAEECGLITQIDHWVLKAACRQ-ANKWREQSGRN 740 Query: 575 F--SVNLMPLTLLQ-KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 F SVNL + + + R+ + + + + + LE+TE S+ ES++ + QL Sbjct: 741 FKMSVNLSSEQFAKDQELVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESAIAIMTQLT 800 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G IAIDDFGTGY++ +K A +KID FVKDI ++ D I SI L + + Sbjct: 801 ALGVSIAIDDFGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLN 860 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 + V+AE VE Q Q L + Q +QGY G+P Sbjct: 861 MEVIAEGVEEQTQIDFLKQHRCQQVQGYFYGKP 893 >UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Burkholderiales RepID=D0J3T4_COMTE Length = 728 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 19/260 (7%) Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYDGGIMT 534 E + ++Q+ L N +R A+ +G + L+ QP I ++ G G + +L + G++ Sbjct: 448 EPHMGSDASEQLELQNDLRHAIQRGQMELHYQPKIDSERGNIIGVEALLRWAHPERGMIA 507 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG--------PRFSVNLMPLTLLQ 586 PD F+PL +F ++ SL W+ C + R ++NL L + Sbjct: 508 PDIFIPLAERFG--------IINSLGNWVIEEACRQLALWRDMGLQMRVAINLSVHQLRE 559 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +A RI + R+ + ++ EITE A + +++ IE+L G ++IDDFGTGY Sbjct: 560 SGLADRITQTLLRHDVQASQLLCEITESVAMEDTQATQRAIEELRDIGIFLSIDDFGTGY 619 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L++L A +KID F++D+ T +V ++ LA A L VVAE VET Q+ Sbjct: 620 SSLNYLRQLPAQQLKIDRSFIRDLETEEDARAVVHAVVRLAHALGLRVVAEGVETAGQRD 679 Query: 707 LLHKLGVQYLQGYLIGRPQP 726 +L + LQGY RP P Sbjct: 680 ILIDMQCDELQGYFYARPMP 699 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 113/430 (26%), Positives = 195/430 (45%), Gaps = 31/430 (7%) Query: 325 QALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT LPN R A+ + L +D + ++ +G M + Sbjct: 611 QANFDTLTNLPNRRLFADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLL 670 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-----RLQHMVNILNS---RQIHW 428 + R L ++E + + ++ G E L++L+G +E R + + + + R Sbjct: 671 IEVARRLTSCVREEDTVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQL 730 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA--HHHVLALDSREEMVSGQTT 486 + T F G+ + + LL + QS A + + DS + + Sbjct: 731 DKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQEI---LE 787 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQ 544 K+ L +R AL++ + LL+ Q + G G + +L G ++P +F+P+ + Sbjct: 788 KRGQLETALRGALERKEFLLHYQLQMDSSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEE 847 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRF-----SVNLMPLTLLQKNIAGRIIRLFKR 599 L VLE+ LA D PRF +VN+ + + ++ + ++ Sbjct: 848 SGLILPIGHWVLETACAQLARWQSD---PRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQ 904 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 I P + LE+TE + S+ +E L G + ++DDFGTGY++ L RL D Sbjct: 905 SGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQ 964 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DI T+ DA IV++I +A + + V+AE VET++Q+ L G Q QGY Sbjct: 965 LKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGY 1024 Query: 720 LIGRPQPLAD 729 L +P P+ + Sbjct: 1025 LYAKPMPIEE 1034 >UniRef50_C4L2F5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L2F5_EXISA Length = 868 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 103/420 (24%), Positives = 195/420 (46%), Gaps = 24/420 (5%) Query: 325 QALTDPLTLLPNFRALEQAPEQ--EAGKSFCCL--RIDNLEFMSRHYGLMMRVHCIRSIC 380 QA D LT L N AL++ E+ E G++F + +D + ++ +G M ++ I Sbjct: 447 QAKFDSLTGLHNRYALQEQIERLIEEGRTFTLMFSDLDGFKEINDQFGHHMGDQLLQHIG 506 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAA 440 + L + NE +L G E ++V + E + + ++ + T +++ Sbjct: 507 KRLRTALLPNEYAGRLGGDEFIVVAEHGDDEMLTERLRRLVYRPPYYMAGTLVEVHASIG 566 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 RF + + L+ LL ++ + E+ + ++VL+ + TAL+ Sbjct: 567 IVRFPEHGKKLKHLLSNADLAMYRAKDKGRDETVMFEPELREDKEERKVLM-EGLETALE 625 Query: 501 QGDLLLYAQPIRNKEGEGY--DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 +G++ L+ QP + + E L R +++G + P +F+P+ + ++ Sbjct: 626 KGEISLFLQPQVDASTKAIIGAEALMRWQHNGAFIPPSQFIPIAEETGH--------IQD 677 Query: 559 LLKWLATHP---------CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 L +W+ D P+ SVNL L +++ + LF+R+ I P + Sbjct: 678 LGRWMIHETFQLIHVFEQGDIHLPKLSVNLSVRQLFDEHLIDYLKTLFERFPIEPSRLNF 737 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE A +++ + I +L G +++IDDFGTGY++ L R D +KI F Sbjct: 738 ELTETVAAHHSDRVLNRILELKALGIKLSIDDFGTGYSSLAYLVRYPIDELKIPREFTMQ 797 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + N M+ +I +A+ +++VAE VET+ Q+ L K+G +QGY +P PL + Sbjct: 798 LEENREYQMVTTTIVAMARQLGMALVAEGVETEYQETFLRKIGCDSMQGYRYAKPMPLDE 857 >UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Actinomycetales RepID=A0LUZ3_ACIC1 Length = 949 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 120/447 (26%), Positives = 202/447 (45%), Gaps = 45/447 (10%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEF 362 + R E L R+ QA +DPLT L N AL + Q + L +D + Sbjct: 470 VSERKE-LERQLTRQAFSDPLTGLANRALFANRVEHALSERSRQPGEVAVLFLDLDGFKG 528 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + H + + L ++ ++ + +L G E +++ GP+ E H V++ Sbjct: 529 VNDAQGHAVGDHLLTLVADRLRRCVRPSDTVARLGGDEFAILVVGPQAEA---HGVDVAE 585 Query: 423 SRQIHWNN----TGLDMGYGAAWG--RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 Q +G ++ A+ G D ET+ LL ++ + + Sbjct: 586 RVQRALAEPFLLSGREVTLAASIGIAVTDDGTETVDQLLRNADLAMYRAKSSRKGTYVRF 645 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-KEGE--GYDEILARLKYDGGIM 533 R EM + V +R AL + +L+L+ QP N + G+ G + ++ G++ Sbjct: 646 RTEMHDALLAR-VQTETDLRHALSRRELVLHYQPTVNLRTGQVVGVEALIRWYHPTRGLI 704 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL--LQKNIAG 591 P F+ + + L +ES+ W A C ++G R+ P + + N++G Sbjct: 705 QPMDFIGMAEETGL--------VESIGAW-AIRECCRQGARWQRYAQPGGVFHVAVNVSG 755 Query: 592 R--------IIRL-FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 R I+R + P A+++E+TE +E ++ + QL FG R+AIDDF Sbjct: 756 RQLHPRLPDIVRTALTETGMPPGALVIEVTENILVKRSEEAIAVLRQLKSFGVRVAIDDF 815 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIV---TNTLDAMIVRSITDLAKAKSLSVVAEFV 699 GTGY++ L R D++KID FV+ I + T +VR+I L +A L VAE + Sbjct: 816 GTGYSSLSYLARFPVDVLKIDKSFVEQITDRNSGTEGTELVRTILHLGRALRLGTVAEGI 875 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQP 726 ET++Q A L + Y QGYL RP P Sbjct: 876 ETREQYAALLAMSCDYGQGYLFSRPLP 902 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 120/433 (27%), Positives = 197/433 (45%), Gaps = 44/433 (10%) Query: 323 HLQALTDPLTLLPN----FRALEQA--PEQEAGK--SFCCLRIDNLEFMSRHYGLMMRVH 374 QA D LT LPN + ++QA + GK + L +D +F++ G + Sbjct: 272 QFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGHQVGDE 331 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH-MVNILNSRQIHWNNTGL 433 ++ + L ++E++ + + G E +L+L+ E + H M +L+ W L Sbjct: 332 LLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEVSQPWKANDL 391 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQ--LSWLAEQSCAHHHVLALDSRE------EMVSGQT 485 + + G TL P G+ + L A + L EM S Sbjct: 392 EFQITCSIGL------TLCPDDGRDAETLLKNADSAMYKAKELGRNNFQYFSAEMNSS-V 444 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 T ++ LLN +R A+ D +L+ QP + + + G + ++ G+++P F+PL Sbjct: 445 TDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLA 504 Query: 543 AQFNLSARFDLQVLESLLKWLATHPC-------DKKGPRF--SVNLMPLTLLQKNIAGRI 593 + L + L +W+ C D P SVNL P L + +I + Sbjct: 505 EETGL--------IIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVV 556 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 R+ + Q + LEITE ++ E S + QL G +I++DDFGTGY++ LK Sbjct: 557 ERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLK 616 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D +KID FV+DI T+ A IV++I L + +L+V+AE +ET+ Q L G Sbjct: 617 RFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGC 676 Query: 714 QYLQGYLIGRPQP 726 QGYL+ +P P Sbjct: 677 DEGQGYLMSKPVP 689 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 115/444 (25%), Positives = 201/444 (45%), Gaps = 51/444 (11%) Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQ-----EAGKSFCCL---RIDNLEFMSRHYGLMMR 372 R H A D +T LPN L++ Q A ++ L +DN + ++ G + Sbjct: 517 RIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLFVDLDNFKTLNDTLGHNVG 576 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-------------------GR 413 ++ + L +E++ + +L G E +++S T+ GR Sbjct: 577 DLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSAAMQGAEAAARYLLSELGR 636 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ--LSWLAEQSCAHHHV 471 + N+ IH N + GA F G QE+++ L+ Q L+ + + V Sbjct: 637 TFQLGNV-----IHRNTVSI----GATL--FKGEQESIESLMRQIDLAIYQAKGAGRNTV 685 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYDEILARLKYD 529 D E+ ++ + +R A+++ LL+ Q ++G EG + +L + Sbjct: 686 RFFDPSMEIA---LRERAAIEEALRYAIEEEQFLLHYQAQIGEDGRIEGAEVLLRWQHPE 742 Query: 530 GGIMTPDKFLPLIAQFN----LSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 G+++P F+PL + L + Q L +W A P G +VN+ + L Sbjct: 743 RGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARW-AESPV-MAGLVLAVNVSAVQLR 800 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + ++ + + P + LE+TE ++ E+++ ++ L G ++DDFGTG Sbjct: 801 QPDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTG 860 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL +KID FV+D++ + D I S+ LAK+ L V+AE VET+ Q+ Sbjct: 861 YSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEAQR 920 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 LL +G QGYL RP P+ D Sbjct: 921 ELLAGIGCHCYQGYLFSRPLPIGD 944 >UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KC5_SACD2 Length = 823 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 115/443 (25%), Positives = 203/443 (45%), Gaps = 26/443 (5%) Query: 307 YMVRIYHRSEWLNRRWHLQALT--DPLTLLPNFR--------ALEQAPEQEAGKSFCCLR 356 Y+ + +E N + L+ L DPLT LPN R L+ A E+++ + + Sbjct: 372 YVGSVLDVTELKNAQHELEKLAYYDPLTHLPNRRYFKDYLVKQLQLAKEEDSIMAVLLVD 431 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL----SGPETEG 412 +DN + ++ G + + + + + + ++ G E LVL S E E Sbjct: 432 LDNFKRINDTLGHDAGDILLSVLAGRIKQRLHSQDLVARMGGDEFYLVLRNLSSLAEVEK 491 Query: 413 RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL--GQLSWLAEQSCAHHH 470 + + ++L S I N +++ + N +T + L+ ++ + + Sbjct: 492 ITKRVRSVLAS-PIRIKNHFVEITASIGVASYPENCDTPEELMRNADIALYKAKGDGRNR 550 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD--EILARLKY 528 V + + Q ++ L + +R A+ +Y QP + + + E+L R + Sbjct: 551 VAYFSAE---LDSQLRDKMRLESKLRQAVSCEAFEIYIQPQYDYKTSKFRWAEVLIRWED 607 Query: 529 -DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTL 584 + G + PDKF+ L + + D VL + K A H + S+NL Sbjct: 608 PEEGFIPPDKFIKLAEETGIINDIDQWVLRATCKLWAEHGEALRAIGIEGVSMNLSARQF 667 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 K + + +F+ Y I+P + EITE N E ++ +E+L G RI+IDDFGT Sbjct: 668 YSKTLFAYVEAVFEEYGINPSCISFEITESMVIENIEGAIETMERLRNIGSRISIDDFGT 727 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL D +KID F+ DI +T D I +I +A+ +LSV+AE +ET++Q Sbjct: 728 GYSSLSYLKRLPIDSLKIDRSFIMDIPGDTNDVAITSAIIAMAEKLNLSVIAEGIETKEQ 787 Query: 705 QALLHKLGVQYLQGYLIGRPQPL 727 L + G ++QGY +P P+ Sbjct: 788 CEFLVEQGCFHMQGYYFAKPAPV 810 >UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYF1_9DELT Length = 711 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 117/451 (25%), Positives = 214/451 (47%), Gaps = 27/451 (5%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNR---RWHLQALTDPLTLLPNFRALEQAPEQ 346 S F A L S + +L +V+ ++ LNR H A D LT L N A + + Sbjct: 271 SYIFFAAFLASVGLIILLLVKTERENQALNRMSQALHRAATRDQLTGLANRFAFDSDQGR 330 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR---SICRTLLPLMQENEKLYQLPGSELLL 403 + ID+ + ++ YG+ + + +I R LP Q + Y+L G + L Sbjct: 331 CRHPLLLLINIDDFKHVNDLYGVRAGDYVLTELAAILRRQLP-AQPWGRCYRLGGDDFGL 389 Query: 404 VLSGPET----EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 +L +T + Q ++ ++ + ++ + + + R ET L ++ Sbjct: 390 LLDEADTTVQPQSLAQQVLAAVDQSEFNYRDQPIRINVSIGISRLRPLLETADLALNEVK 449 Query: 460 WLAEQSCAHHHVLALDSREEM-VSGQTTKQVLLLNTIRTALDQGDLLLYAQPI-RNKEGE 517 L S L +EE+ + + + +L R AL D+L+Y QPI N+ G+ Sbjct: 450 KLRRGSF-------LIYQEELNLQERIADNLQVLENARRALSNDDVLVYYQPIVDNRTGK 502 Query: 518 GYD-EILARLKY-DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF 575 E L RL+ DG +++P FL ++ + +L F ++++ LA C + G F Sbjct: 503 IVKFESLVRLRNPDGQVLSPVMFLDVVKESSLYPEFTRRMVDKTFADLAD--C-RYG--F 557 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 S+NL ++++ + I+ K + + + EI E + N IE++ G Sbjct: 558 SLNLSIADIVEQEVQDFIMAKIKAHPEIARRLTFEILESEGVENIALVQSFIERVKAAGC 617 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 +IAIDDFG+GY+N+ + + + D IKID +++I + ++VR+I D + ++ V Sbjct: 618 QIAIDDFGSGYSNFAHILQFKVDSIKIDATLIRNIHQDQQAQVLVRTIVDFCRQLGINTV 677 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 AEFV +++ ++ +LG+ Y QGY +G+P P Sbjct: 678 AEFVHSEEVLQVVKELGIDYSQGYFLGKPAP 708 >UniRef50_Q30P66 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30P66_SULDN Length = 861 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 109/411 (26%), Positives = 189/411 (45%), Gaps = 27/411 (6%) Query: 328 TDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 TD LT N L + ++ S L +DN ++ YG I SI + + Sbjct: 464 TDALTGYDNRTKLSEDIKELKDLSLAILNLDNFRQLNDFYGHQFGNLVIISIANKIYNFI 523 Query: 388 QENEKL--YQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWG-RF 444 +++KL Y+L G E ++V + E + IL + ++ ++ + G F Sbjct: 524 SKDKKLKFYRLQGDEFVVVGVEYDKEKFISKTKEILLLIKERFSMKNEEILLSCSCGISF 583 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + N+ L G L + +L D + + Q +++ I AL ++ Sbjct: 584 EDNEHILS---GANMALKTAKKSSIDLLVYDDSLSL-NQQYENNMIVTKKISDALKNDNI 639 Query: 505 LLYAQPI-----RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ----FNLSARFDLQV 555 + Y QPI NKE + Y E L R++ I++P FL + Q F ++ Q Sbjct: 640 ITYYQPIINNKDENKEPKKY-ECLVRMRDGDKILSPYFFLDIAKQTKQYFGITKAVVFQA 698 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 E K +FS+NL +L + ++ I+ + RY + + VI EI E + Sbjct: 699 FEMF---------KDKEAQFSINLSINDILDEEMSKYILMMLDRYEVGNR-VIFEILESE 748 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N E + I ++ K+ +IAIDDFGTGY+N+ L +L+ D++KIDG +++I + Sbjct: 749 YIENFEELLIFITKIKKYKCKIAIDDFGTGYSNFGYLIKLKPDLLKIDGSLIRNIDKDKN 808 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +IV +I + + + +VAEFVE ++ ++ LG+ Y QGY P+ Sbjct: 809 ARLIVSTIVEFSHKLGMKIVAEFVENKEIFEIVKTLGIDYSQGYYFSEPKE 859 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 111/426 (26%), Positives = 199/426 (46%), Gaps = 29/426 (6%) Query: 326 ALTDPLTLLPNFRALEQ------APEQEAGKSFCCLRI--DNLEFMSRHYGLMMRVHCIR 377 A DPLT LPN R L A +G+ L I DN + ++ G M +R Sbjct: 381 AFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALNDTLGHDMGDLLLR 440 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVL---------SGPETEGRLQHMVNILN-SRQIH 427 + + L ++E + + +L G E +++L + +TE + ++ +L Q+ Sbjct: 441 QVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGEKILAMLGLPYQLV 500 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLL--GQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + GA F G++ + LL ++ + + V D + + Sbjct: 501 AHEYRCTPSIGATL--FSGHELAKEELLKRADIAMYQAKQAGRNTVRFFD---QQMQDAV 555 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIA 543 T +V L + ALD+ L+ Q + G G + ++ + + G++ PD+F+ + Sbjct: 556 TARVALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALIRWMHPERGLVPPDQFIGMAE 615 Query: 544 QFNLSARFDLQVLESLLKWLAT--HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + +L V+++ L T + +VN+ Q + ++ +R+ Sbjct: 616 ETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQRHA 675 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 I P+ + LE+TE N E ++ + L + G + ++DDFGTGY++ + LKRL D IK Sbjct: 676 IDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQIK 735 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+DI +++ D IV +I +A+ L V+AE VET++Q+ L G + QGYL Sbjct: 736 IDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYLF 795 Query: 722 GRPQPL 727 G+P P+ Sbjct: 796 GKPVPV 801 >UniRef50_B8GQU5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQU5_THISH Length = 732 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/244 (33%), Positives = 127/244 (52%), Gaps = 11/244 (4%) Query: 495 IRTALDQGDLLLYAQPI-----RNKEGEGYDEILARLKYDGG-IMTPDKFLPLIAQFNLS 548 I A+ +G L+AQ I R K + E+L +++ +G ++ P FLP ++NLS Sbjct: 488 IHQAVQEGRFSLFAQTIQPVEAREKHRGTHLEMLIKMQGEGDELIPPGVFLPAAERYNLS 547 Query: 549 ARFDLQVLESLLKWLATHPCDKKGPRFS---VNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 D VL+ W+A D+ R S +NL ++ ++ KR+ + Sbjct: 548 GTIDRWVLQHTFSWIADAGLDEN--RLSLCAINLSGHSVGDPAFLDYVVSQLKRHALPAT 605 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + EITE A +N + +E L G R A+DDFG+G +++ L+ L D +KIDG+ Sbjct: 606 LICFEITETVAIANLNQARTMMETLGGMGCRFALDDFGSGMSSFGYLRTLPVDYLKIDGL 665 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FVKDI + D +VRSI D+A +AEFVE+Q+ L ++GV Y QG I P Sbjct: 666 FVKDIAKDPTDLALVRSINDIAHVMGKRTIAEFVESQEILDRLQEMGVDYAQGNFIAEPV 725 Query: 726 PLAD 729 P+A+ Sbjct: 726 PVAE 729 >UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67NQ9_SYMTH Length = 720 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 114/418 (27%), Positives = 195/418 (46%), Gaps = 19/418 (4%) Query: 326 ALTDPLTLLPNFRALEQAPEQ------EAGKSFCC--LRIDNLEFMSRHYGLMMRVHCIR 377 A+ D LT L N R +Q E+ G+S + +D + ++ G +R Sbjct: 295 AMVDSLTDLANRRRFQQELEEAVTEAERTGRSGALVFIDLDMFKHINDTLGHPAGDEVLR 354 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-RQIHWNNTGLDMG 436 + L ++ + +L G E LVL + Q +L + R+ + + Sbjct: 355 QVATILRSAIRPGDTAARLGGDEFALVLRNADGARAAQVADRLLTAIRRARFGGAEAPVS 414 Query: 437 YGAAWGR--FDGNQETLQPLLGQLSW-LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 A+ G F + +++ L+ + L E A + E + Q+L Sbjct: 415 LTASMGVVLFPEHGRSVRELMNRADMALLEAKEGGRDSWAPFTPEGRWQREMQAQLLWRQ 474 Query: 494 TIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGG-IMTPDKFLPLIAQFNLSAR 550 I AL++ +L+ QPI + + E L R+ DGG ++ P +F+ + +F+L + Sbjct: 475 RISRALEEDRFVLHYQPILDLRRNAVTRHEALLRMVGDGGELIFPGEFMAVAERFDLIQQ 534 Query: 551 FDLQVLESLLKWLATHPCDKKGPR--FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 D VLE ++ LA + G R VNL TL+ + I R + P +++ Sbjct: 535 VDRWVLERAVRELAE--LQRAGRRTVLEVNLSGRTLMDPVLPAVIRRGLTLRDVDPASLV 592 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE A S+ + + I ++ G R+A+DD G G+A+ LKRL D IKIDG F++ Sbjct: 593 LEITETAAISDVDQAERFIGEMKALGCRLALDDVGAGFASLYFLKRLPVDYIKIDGAFIR 652 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 ++ +T D +VR++ + + VAEFV++ + ++ + G+ Y QGYLIGRP P Sbjct: 653 NLPHDTADQHLVRALASVCRELGKQTVAEFVDSPKTLQVVREYGIDYAQGYLIGRPGP 710 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 25/261 (9%) Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDG-GIMTPDKFLP 540 ++++ + N +R AL +G+L L+ QP R+ G E+L R + G P +F+ Sbjct: 873 ASERLRMENDLRLALARGELALHFQPQVDARDNRIVGA-EVLLRWHHPQLGQQPPSQFIQ 931 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK----------KGPRFS--VNLMPLTLLQKN 588 ++ + L +LE + W+ CD F+ VN+ P Q + Sbjct: 932 VLEESGL-------ILE-VGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQND 983 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 GR++R Y + Q + LEITE N E ++ + +L ++G A+DDFGTGY++ Sbjct: 984 FVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSS 1043 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL D +KID FV+D + DA IVR+I +A++ L+V+AE VE +Q A L Sbjct: 1044 LTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFL 1103 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +LG QGYL RP PL + Sbjct: 1104 ERLGCHLYQGYLHSRPLPLPE 1124 >UniRef50_A4WAU1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Enterobacteriaceae RepID=A4WAU1_ENT38 Length = 709 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 112/427 (26%), Positives = 192/427 (44%), Gaps = 23/427 (5%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQ------EAGKSFCC--LRIDNLEFMSRHYGL 369 LN++ LQA D LT L N ++ + + K F L ID+ + ++ +G Sbjct: 252 LNKQLELQARFDALTGLANRHQMDISLQDCLHTSLLNKKQFAVMFLDIDHFKLINDAWGH 311 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--RQIH 427 + + ++ + + + L +L G E +L++ + E + +L+ R Sbjct: 312 QVGDELLINVAQRITARLVPGMTLARLGGDEFILLVPDCDDEKITTLSMTLLDEIRRPFA 371 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS----REEMVSG 483 +++ + + ETL +L + A+ + H + R EM S Sbjct: 372 IGGHAINVTLSVGVSLYPQHGETLH----ELKFKADAAMYHIKQEGRNGWAIYRPEM-SK 426 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLP 540 T + L + AL++ L+ QP E G++ ++ + G++ P FLP Sbjct: 427 SITAEPSFLQDLTQALEREQFELWYQPTYLADANEIHGFEALIRWHHPEQGVLLPAVFLP 486 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + L + +E + L G S NL P+ Q++I I ++ Sbjct: 487 SLEKTGLIIPVGVWAIEQACRQLRFWTEQGFGQWTLSFNLSPVQFEQQDIFEIITSTIQK 546 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 Y++ P +ILE+TE A N E S+ + + GF ++IDDFGTGY+N L L A Sbjct: 547 YNLEPSRLILEVTESTALKNLERSIELLNAFSQAGFIVSIDDFGTGYSNLLMLNVLPAKE 606 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F+ ++ N IV +I ++A+ + VVAE +ET +QQ +L LG YLQGY Sbjct: 607 LKIDKSFIDSMLDNNKSQKIVETIINVARTMDMVVVAEGIETAEQQQILTNLGCDYLQGY 666 Query: 720 LIGRPQP 726 RP P Sbjct: 667 YFSRPLP 673 >UniRef50_Q7MQJ2 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MQJ2_VIBVY Length = 753 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 116/459 (25%), Positives = 209/459 (45%), Gaps = 26/459 (5%) Query: 288 EYSLAFILAVLISFSVCLLYMV----RIYHRSEWLNRRWHLQALTDPLTLLPNFR----A 339 + ++A I++ SF C Y V ++ H E + A TD LT L N R Sbjct: 287 QLAIALIVSGFASF--CFFYYVTLPKKLQHAVEQKTFQLKKLANTDMLTGLDNRRKFTDV 344 Query: 340 LEQAPEQEAGKSFCC----LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 L Q ++ + C L IDN + ++ G + ++ + + L + + + + + Sbjct: 345 LNQILQKPDALAHCHALLYLDIDNFKQINDQLGHYVGDQVLKVVAQRLCHHVSDAQSITR 404 Query: 396 LPGSELLLVLSGPETE---GRLQHMVNILNSRQIHWNNTG-LDMGYGAAWGRFDGNQETL 451 + G E ++L E + RL ++ L+ H N+ L + G DG TL Sbjct: 405 ISGDEFAVLLEYQEIDSLKARLSALIVALSQPSEHIPNSHRLTVSIGVVLIPQDGQDLTL 464 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + +S + D ++ + +++ L+ +++ A++Q +L+ QPI Sbjct: 465 LMQHVDFAMYQAKSQGRNQYCFFD---RLMKLRDDEKIQLIESLKIAIEQNQFVLHYQPI 521 Query: 512 ---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 R+ + Y+ ++ G++ P F+ L Q L VL +++A Sbjct: 522 YDIRSHQIHCYEALIRWQHPTKGLLFPASFIELAEQSGLINEIGDCVLAQACQFIAQTAQ 581 Query: 569 DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 +K P S+N+ L + R I + ++Y + ++ E+TE N +S + Sbjct: 582 EK--PIVSINISASQLSDPQLFERFIGIIQQYGVDAHSLKFELTETTLMQNIQSCTNILL 639 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 + + G +IAIDDFGTGY++ LK + A+ +KID F+ I +NT D + +SI LA Sbjct: 640 KFKQLGIQIAIDDFGTGYSSLAVLKDVPANYLKIDKSFIDQINSNTGDQKVAQSIITLAH 699 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + V+AE VE +Q+ LL + + QGYL GRP P+ Sbjct: 700 HLDMQVIAEGVEQIEQEELLAQFQCDFGQGYLFGRPAPV 738 >UniRef50_B5JU45 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JU45_9GAMM Length = 787 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 105/423 (24%), Positives = 176/423 (41%), Gaps = 24/423 (5%) Query: 325 QALTDPLTLLPNFRALEQA-------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 QA DPL+ L N E P + C + I+ + ++ G IR Sbjct: 353 QATHDPLSDLLNRHEFEHQLQQLVSQPIDKQHHVLCTIDINQFKVINDTCGHNAGDELIR 412 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETE---GRLQHMVNILNSRQIHWNNTGLD 434 + E + +L G E +++ G TE R++ + ++ +W + Sbjct: 413 QFADLIRDDALERDITGRLGGDEFGILIIGTNTEDAVARIKKLRERISDFHFNWEDKSFS 472 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH-----HVLALDSREEMVSGQTTKQV 489 + DGN + L L+ A Q+ HV D E M + Sbjct: 473 ISVAIGVVEIDGNTDYLADLMNDAD-AARQAAKEKGRNRIHVYQPDDHELMRRRGEMRWA 531 Query: 490 LLLNTIRTALDQGDLLLYAQPI----RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 LN A+ LL Q I +++G+ Y+ +L L G I + FL ++ Sbjct: 532 AYLNG---AIADNRFLLTRQTILPLQEHEKGQHYEILLRCLDESGKISSAGDFLNAAERY 588 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 NL + D V+ L+ W + P + S+NL +++ + + R Sbjct: 589 NLISEIDRWVVRHLVTWFESTPTAMEATHTVSINLSARSIIDSRFTQDLREMMLRMPGLA 648 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + V EITE A +N + I + G A+DDFG G ++ LK+L D +KIDG Sbjct: 649 KKVCFEITETAAIANFNQAKSFIVAMRALGCSFALDDFGKGMSSLSYLKQLPVDYLKIDG 708 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+D++++ +D +V I +A + +AE+ E + +L ++GV Y QGY I RP Sbjct: 709 DFVRDLLSDPIDRAMVEHINQIAHMIGMKTIAEYAENHEIIQVLREIGVDYAQGYGIDRP 768 Query: 725 QPL 727 P+ Sbjct: 769 HPI 771 >UniRef50_C6AZA7 Diguanylate cyclase/phosphodiesterase n=12 Tax=Rhizobium RepID=C6AZA7_RHILS Length = 515 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 124/465 (26%), Positives = 217/465 (46%), Gaps = 44/465 (9%) Query: 294 ILAVLISFSVCLLY-MVRIYHRSEWLNRRWHLQ------ALTDPLTLLPNFRALE----Q 342 +LA+ IS + L+Y +RI S ++RR + A D LT LPN R L+ Q Sbjct: 52 LLALNISGFLGLIYSALRIRDLSREVHRRLQAEKNVDWIACHDTLTELPNRRFLDSICAQ 111 Query: 343 A-PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVH---CIRSICRTLLPLMQENEKLYQLPG 398 A +Q A +++ ID L+ + L+ H ++++ + L L E++++L G Sbjct: 112 AMSDQRAQETYAVFSID-LDGFKKVNDLLGHDHGDAVLKTVAQRLSSLF-PRERVFRLGG 169 Query: 399 SELLLV---LSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +++ P+ +V ++ + +N +D+G + F N + L Sbjct: 170 DEFVVLARRTGNPDLVALGNRIVTVI-GKPFTFNGVAVDLGASVGFALFPENGDDL---- 224 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVS-------GQTTKQVLLLNTIRTALDQGDLLLYA 508 GQ+ + CA + +A +V + K+V L +R A+ + +++ Y Sbjct: 225 GQV--IRHSDCAMY--VAKKQGRNLVKPFVPSMQDELAKRVRLEADLRAAIKKAEIVPYY 280 Query: 509 QPIRNKEGE---GYDEILARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + + G+ E LAR K G + P++F+P+ + L Q+L Sbjct: 281 QPLVDLKTNRIIGF-EALARWKTASGEFIPPNEFIPVAEEAGLIVELTDQLLRHACADAL 339 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + P + S NL P+ L + + RI+++ + V LE+TE +A ++ Sbjct: 340 SWPNELV---LSFNLSPIQLSDRLLGLRILKILGDVGLPAHRVELEVTESAIIQDAVTAR 396 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ L G RIA+DDFGTGY++ +L + D IKID FV TN ++++I Sbjct: 397 IVLDDLVNAGVRIALDDFGTGYSSLSQLSNYRFDKIKIDRSFVSSFETNDKQDKVIKAII 456 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L +++ AE +E + Q L LG QGYL+GRP P A+ Sbjct: 457 ALGAGLGVTITAEGIEEESQLQRLQDLGCDIGQGYLLGRPAPAAE 501 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 111/413 (26%), Positives = 191/413 (46%), Gaps = 21/413 (5%) Query: 329 DPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN A+ A + + L +DN + ++ G + ++ Sbjct: 622 DPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFS 681 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQ--IHWNNTGLDMG 436 + L+ ++E + + +L G E +LVL G +T+G +LN +RQ I + L + Sbjct: 682 QRLVNAVREQDTISRLGGDEFVLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVS 741 Query: 437 YGAAWGRFDGNQ-ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G A DG +TL + A+QS + + + ++ + + + N + Sbjct: 742 IGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYCFFTTE----MQARSARTLQIDNAL 797 Query: 496 RTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL++ L QP + G++ ++ G PD+F+P+ Sbjct: 798 RRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIG 857 Query: 553 LQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL++ ++ L K SVNL + + ++ + + +SP+ + LE+ Sbjct: 858 EWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLEL 917 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE A N +++ I++L K G RI+IDDFGTGY++ LKR +KID FV+D+ Sbjct: 918 TEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLP 977 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +T D IV ++ LA + + VAE VET++Q L G +QGY + RP Sbjct: 978 NDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRP 1030 >UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGP3_OLICO Length = 825 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 114/424 (26%), Positives = 201/424 (47%), Gaps = 17/424 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRAL-EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMR 372 R ++L + L L + + + R + ++A Q+ + L ID ++ YG Sbjct: 370 RIQYLAQHDSLTGLFNRVAFNDHVRKVWQKAAAQKHPFTILSLDIDRFSEINDTYGHSTG 429 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM-VNILNSRQIHWNNT 431 +R R L + + +L G E ++V S E R + +L + ++ +N Sbjct: 430 DAFLREAARRLQAACG-SAFIARLGGDEFMIVSSEGEQPARAGDICTRVLTAFEMMFNID 488 Query: 432 GLDMGYGAAWGR--FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 G + G G + + E ++ L+ + +A ++ E + Q ++ Sbjct: 489 GHAIHSGCTVGVSIYPQDGEDIETLISN-AGVALYRAKKEERGSIRFFEPEMDRQLREKR 547 Query: 490 LLLNTIRTALDQGDLLLYAQPIRNKEGEGYD-EILARLKY-DGGIMTPDKFLPLIAQFNL 547 ++L+ + L+ L L+ QP + +G + E L R ++ + G++ P F+PL + Sbjct: 548 VMLHDLDLVLENKQLELHFQPQADPDGTPFGFEALVRWRHPEKGLVPPGVFVPLAEETGA 607 Query: 548 SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 D +L + A+ P K ++N+ P++ ++ G I + ++P+ + Sbjct: 608 IVAIDEWILRKACQEAASWP---KPLSIAINVSPMSFQHNDLPGLIHSILLETGLNPKRL 664 Query: 608 ILEITEE---QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 +EITE Q FS A S + I+ L G R+A+DDFGTGY++ L+ D IKID Sbjct: 665 EIEITEGVLVQDFSRACSILRRIKNL---GVRVAMDDFGTGYSSLSYLQSFPFDKIKIDQ 721 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV I N + I+R+I L +A +L V+AE VET+ Q+ L G +QGYLIGRP Sbjct: 722 AFVAQINKNVQSSAIIRAIISLGEALNLGVIAEGVETELQRDFLADAGCFEMQGYLIGRP 781 Query: 725 QPLA 728 QP+A Sbjct: 782 QPIA 785 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 106/436 (24%), Positives = 187/436 (42%), Gaps = 42/436 (9%) Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLM 370 N + H AL D LT LPN LE +Q + S L +D + ++ G Sbjct: 257 NEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDGAFSVFFLDVDRFKPINDSLGHS 316 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIH 427 ++ + R L + + + ++ G E ++V + G++ + + + + Sbjct: 317 TGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQKDPGKVHEIARKIRDCVAENME 376 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE-EMVSGQTT 486 + L + F + T + LL A A ++ + S + + SG+ Sbjct: 377 VDGQSLSVTTSIGISLFPHDGTTFRTLL------ASADSAMYYAKSKGSGQIQFYSGELN 430 Query: 487 KQVLLL----NTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFL 539 L N +R +++ + +LY QP + E E + ++ + GI+ P F+ Sbjct: 431 DSAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFI 490 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK---------KGPRFSVNLMPLTLLQKNIA 590 P + L + L +W+ C + R +VNL L + +++ Sbjct: 491 PRAEETGL--------IIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLM 542 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I+ + + P+ + LEITE + E +M + + + G +AIDDFGTGY+++ Sbjct: 543 KEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFS 602 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ D +KID F+ DI N DA IVR+I L +L V+AE VE+Q Q +L Sbjct: 603 YLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKA 662 Query: 711 LGVQYLQGYLIGRPQP 726 + QG+ RP P Sbjct: 663 MECDAYQGFFNSRPLP 678 >UniRef50_UPI0001AEC6AC sensory box/GGDEF family protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC6AC Length = 745 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 111/417 (26%), Positives = 187/417 (44%), Gaps = 30/417 (7%) Query: 329 DPLTLLPN--FRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 + LT L N F + ++ E + L++ NL ++ YG + S+ L Sbjct: 330 NELTGLKNHHFWKIAESSESILNRHIVLLKLANLREVNLQYGYSQGDQLLLSVASLLQSE 389 Query: 387 MQENEKLYQLPGSELLLVLSGPE-TEGRLQHMVNILNSRQIHWNNTGLDMGYGAAW--GR 443 + +YQ PG++ L ++G + ++H + + N+ + + W G Sbjct: 390 FTNDVSVYQFPGAKFLFTVNGKHLSTQSIEHYLERRLPTSMVINSARGTVEHMLKWRAGH 449 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS----GQTTKQVLLLNT----- 494 + ++E +S A C +AL +E T + + NT Sbjct: 450 YHASRE--------ISLDAAAECC---AIALSQSDEFAPYISFSINTVKTIRENTQQKDK 498 Query: 495 IRTALDQGDLLLYAQPIRNKEGE--GYDEILARLK--YDGGIMTPDKFLPLIAQFNLSAR 550 ++ LD G L LY QP + G GY E+LARLK G ++ P +FLPL+ + Sbjct: 499 VKALLDNGCLALYLQPQVSLHGVTVGY-EVLARLKEPKSGTVLQPFQFLPLVEENKWEVL 557 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 F ++++ L L P + ++NL LL +++R F + + LE Sbjct: 558 FTQKIIDGTLALLDKWPSNLPKVPLAINLSGPELLSDLFYEKLLRRFSESPELGERLKLE 617 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE ++ + + L G I IDDFGTG+A+ +L + A +IK+D FV+ + Sbjct: 618 LTETSVLASHYETKRRLTSLANVGATIIIDDFGTGHASLSQLIDMSASVIKVDREFVERV 677 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 T+ IV+ DLAK+ + +AE VETQ Q +L +G QGYL G+P P+ Sbjct: 678 ETSERHRKIVKMTLDLAKSLDMQTIAEGVETQAQLRVLKDMGFNIFQGYLFGKPAPI 734 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 135/252 (53%), Gaps = 20/252 (7%) Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKE-GE-GYDEILARLKYDG-GIMTPDKFLPLIA 543 +++ L N +R AL++ + +L+ QP N E G+ E L R ++ G++ P +F+PL Sbjct: 368 ERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLAE 427 Query: 544 QFNLSARFDLQVLESLLKWLATHPC-------DKKGP--RFSVNLMPLTLLQKNIAGRII 594 + L + L +W+ C D P + +VNL P L Q +++ + Sbjct: 428 ETGL--------IVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVA 479 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 R+ ++P +++E+TE +AE ++ +L + G RI+IDDFGTGY++ LK+ Sbjct: 480 RVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKK 539 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 +KID FV++I +N D I ++ +AK +L VVAE VET +Q +L L + Sbjct: 540 FPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCR 599 Query: 715 YLQGYLIGRPQP 726 Y+QG+L P P Sbjct: 600 YMQGFLFSEPAP 611 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 117/444 (26%), Positives = 199/444 (44%), Gaps = 34/444 (7%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPN--------FRALEQAPEQEAGKSFCCLRID--NL 360 I R E+ + H QA D LT LPN RA+E+ ++ F + ID Sbjct: 813 ISERKEFERQITH-QAFHDSLTGLPNRSLFRERLGRAVERT-KRRPDYHFAAMLIDLNKF 870 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 ++++ G + I L ++ + + +L G E ++L T + + + Sbjct: 871 KWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGDEFAILLEEFRTNKEVISVASR 930 Query: 421 LNS---RQIHWNNTGLDMGYGAAWG-----RFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + R WN G ++ GA+ G R E + + A++ H V Sbjct: 931 IQNEVRRAFLWN--GKEIVSGASVGIVLQTRDCAGAEDILRDADIAMYKAKERGRGHLVF 988 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYD 529 R+E++ + + + N +R A++ L L+ QPI + +G EG++ ++ + Sbjct: 989 HNRMRQEVL-----EVINMENELRRAIEGNSLELHYQPIFDVDGGKLEGFEALVRWRHPE 1043 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLES----LLKWLATHPCDKKGPRFSVNLMPLTLL 585 G++ PD+F+PL + L V+ + L W + G SVNL Sbjct: 1044 HGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLTMSVNLSCKQFA 1103 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + I+R + I+P + LEITE + ++ + +L + G +A+DDFGTG Sbjct: 1104 QHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLKEIGVLLAVDDFGTG 1163 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ L++ DI+KID F+ T +A IVRSI D+A + L V AE VETQ+Q Sbjct: 1164 YSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRVTAEGVETQEQL 1223 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L + QGY+ +P D Sbjct: 1224 ERLQSINCDRAQGYMFSKPMAPGD 1247 >UniRef50_A4SJC3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SJC3_AERS4 Length = 667 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 16/274 (5%) Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGE 517 LA+ H D + + ++ L+ + A+ G L QPI RN + Sbjct: 389 LAQGKRQQQHCTLFDPE---LDAKLKRRQLIAAQLPLAIKSGQLTAVYQPIISTRNNQLH 445 Query: 518 GYDEILARLKY-DGGIMTPDKFLPLIAQFNLSARFDLQVLES----LLKWLATHPCDKKG 572 G E+L R + + G+++PD+F+PL + L + ++LE L +W P Sbjct: 446 GA-ELLCRWPHPELGMISPDEFIPLAEELGLIGQLGQRMLEQGCAQLARWQGAAP----D 500 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 S+NL PL ++ +I +R+ ++P + LEITE NA+ N+ L + Sbjct: 501 LVLSINLSPLQFRDPDLCPQIFACIERHGLAPWQLELEITEGVLMENADEIESNLANLIE 560 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 GF++AIDDFGTGY + L RLQ +K+D F + + TN IVRS+ L + Sbjct: 561 AGFQLAIDDFGTGYCSLAYLPRLQVATLKLDRSFTQGLATNQATTAIVRSVIGLGHELGI 620 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + AE VET +QQA L + G LQGYL RP P Sbjct: 621 RITAEGVETPEQQAWLVQAGCDRLQGYLFSRPLP 654 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 120/438 (27%), Positives = 210/438 (47%), Gaps = 52/438 (11%) Query: 325 QALTDPLTLLPN----FRALEQ----APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT LPN L+Q A + + + +D+ + ++ G + + Sbjct: 165 QANHDSLTDLPNRVLFMDRLQQSINIAQRYDNKVALLFIDLDHFKEINDSLGHGVGDKVL 224 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS--------RQIHW 428 + R + M++++ L +L G E ++L+ ++ M +I+ S +I+ Sbjct: 225 IEVSRRMKNQMRKSDTLSRLGGDEFCIILNDIID---IEDMSDIITSGMEALKEPMEING 281 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR------EEMVS 482 + + M G + DGN S L + + A + D R +E ++ Sbjct: 282 HTLYVGMSIGVSVYPNDGNS---------ASSLLKNADAAMYKAKGDGRNTYCFYDEAMT 332 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYD-GGIMTPDKF 538 + ++V L +R AL++ +L++Y QP I +E + G E L R ++ G + PDKF Sbjct: 333 ERAFERVFLETALRKALEEDELVVYFQPQIDARENKLVGM-EALVRWEHPIMGFIYPDKF 391 Query: 539 LPLIAQFNLSARFDLQVLESLL----KWLATHPCDKKG---PRFSVNLMPLTLLQKNIAG 591 +PL + + D V++ L KW DK G + ++NL + + + Sbjct: 392 IPLAEITGMIVQLDRLVMKKALTQFKKW------DKAGLNPGKLALNLAIKQIEENDFIE 445 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I + S + + E+TE Q +N E+S+ +++L G IAIDDFGTGY++ Sbjct: 446 FIENILDCEDCSYKNIEFELTENQIMNNPEASIETLQKLSDLGISIAIDDFGTGYSSLAY 505 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL D +KID F+KD+ + DA I ++I L + +L V+AE VET++Q+ + + Sbjct: 506 LKRLPIDKLKIDRSFIKDLPQDADDAAITKTIISLCSSLNLKVIAEGVETEKQKNFILQN 565 Query: 712 GVQYLQGYLIGRPQPLAD 729 G Q++QGY RP + D Sbjct: 566 GCQFIQGYYYSRPLSIED 583 >UniRef50_Q89MX8 Blr4064 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89MX8_BRAJA Length = 689 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 117/432 (27%), Positives = 201/432 (46%), Gaps = 23/432 (5%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQ---APEQEAGK-----SFCCLRIDNLEFMSRH 366 S L+R H+ A DPLT LPN R+L + +AG +FC + +D+ + ++ Sbjct: 235 SGALDRLGHM-ASHDPLTSLPNRRSLSERLVTLSGDAGSPDSLIAFCFIDLDDFKGINDT 293 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ----HMVNILN 422 +G + I L ++ + + +L G E +++ E Q H++ ++ Sbjct: 294 FGHDAGDKFLVHISGRLREAVEPQDWVARLGGDEFVVIRPEVSNEATAQAFARHLLAAIS 353 Query: 423 SR-QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 ++H G A R D + + P L ++ ++ A V L+ E + Sbjct: 354 EPIRLHDKQVVPRASIGLAVRRADDPELSHLPALADIALYHAKTKAPGTVAVLN---EAL 410 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD--EILARLKY-DGGIMTPDKF 538 ++ L I T +G ++ Q + + +G E L R ++ + G++ P +F Sbjct: 411 QRDYRRRRELELAIPTGFAEGQFEVWYQSQVDLDSQGVVGLEALIRWRHPEYGVIGPGEF 470 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP--RFSVNLMPLTLLQKNIAGRIIRL 596 L LI + +AR VL + L H P R ++NL P L ++A + Sbjct: 471 LSLIERSGNNARLTRYVLTDACRAL-RHLAAAGRPDIRIAINLPPSELADHSLAAELRET 529 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 +R+ ++ ++ LEITE +N S+ + +L + G IA+DDFGTGY++ L+R Sbjct: 530 CQRFGVAASSLELEITEGSLINNIASASETLHRLRRLGATIALDDFGTGYSSLAHLRRFP 589 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID F+ +I + D IV I LA L++VAE +E +Q + ++GV Sbjct: 590 LDKVKIDKAFISEIPDSAEDKAIVGVIASLAGTLGLTLVAEGIERPEQADAMREMGVMLG 649 Query: 717 QGYLIGRPQPLA 728 QGY RPQPLA Sbjct: 650 QGYHYHRPQPLA 661 >UniRef50_Q3JE85 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JE85_NITOC Length = 979 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 118/453 (26%), Positives = 206/453 (45%), Gaps = 27/453 (5%) Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--- 351 LAV S V +L + E +R A DPLT L N R + EQ G S Sbjct: 515 LAVHPSSDVVVLSVGHDVTEREQAEQRLAWLADHDPLTELFNRRRFQHEFEQILGASIRY 574 Query: 352 -----FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 +D ++++ G +R + L +++ ++ + +L G E +V+ Sbjct: 575 GTQGGLLYFDLDQFKYINDTSGHQAGDALLRMVADKLRQVVRGSDIVARLGGDEFAVVIR 634 Query: 407 GPETEGRLQHMVNILNSRQI-----HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ---- 457 + E ++ + N + + G A F + T++ L+ Sbjct: 635 ECDVESAVRVARKVCTQLSTLEFPARGGNHSISLSIGIAL--FPLHGATVRDLMANADVA 692 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE 517 + E+ H+ + D E V + ++V I AL + LLY QP+ + Sbjct: 693 MYQAKEEGRGRWHLFSSD---EQVRERMQQRVYWKEQIEQALREDRFLLYFQPVLDIRTH 749 Query: 518 --GYDEILARLKYD--GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G+ E+L R+ YD G I++P +F+P+ Q L D VL + A Sbjct: 750 TIGHYEVLLRM-YDHRGRIISPAQFIPVAEQSGLIHAIDHLVLRKAIAQQAKLWSQGYHL 808 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 S+NL + + + L + ++P +++ E+TE A ++ ++ + ++ Sbjct: 809 TLSINLSGRVVDDPELVPILEDLLRTTGVNPSSLMFEVTETAAVADLAAAEGFMHRIKAH 868 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R A+DDFG G++++ LKRL D +KIDG+FV+++ + D + V++++++AK Sbjct: 869 GCRFAVDDFGVGFSSFFYLKRLPVDYVKIDGMFVRELAKSHQDQVFVKALSEVAKGLGKK 928 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 VAEFVE + ALLH+ GV Y QG+ IGRP P Sbjct: 929 AVAEFVEDAEALALLHEYGVDYAQGHYIGRPTP 961 >UniRef50_Q7MS36 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MS36_WOLSU Length = 522 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 112/402 (27%), Positives = 183/402 (45%), Gaps = 34/402 (8%) Query: 342 QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 QA +E + + +D+L+ +Y + + I +I + + ++ Y+ GSE+ Sbjct: 133 QAIAKEDDRVMMLIEVDHLD----NYHTVFSLAFIDAILQEVGDFLEH----YKPDGSEI 184 Query: 402 L-------LVLSGPETEGRLQHMVNILN----SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L E R + ILN R+I+ +D+ + + G ET Sbjct: 185 FSISEEKYAILMEDENTFRAEDFATILNVLILDRKIYVKKQEVDVSFSVGVAK--GRGET 242 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 L A++S H VLA D EE Q + + + +R AL++ ++ Y QP Sbjct: 243 LLSKAYAALRKAKESGRKHVVLAEDD-EEFRFFQR-ENLRWMRGVRHALEEDRIVPYYQP 300 Query: 511 IRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 I N E Y E LARL ++ P FL Q L + ++ L + Sbjct: 301 IINNATGKIEKY-ECLARLIDHEVVVPPAIFLQSARQIGLMSNVTFAIINKSLTLFQNND 359 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + S+N+ + I ++ +RY I P +++EI E+ F S+ ++ Sbjct: 360 ME-----LSINIAEEDIRDAKIIRYLLNRCERYGIDPSRIVIEILEDITFGRNNKSLEHM 414 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 LH+ GF+IAIDDFG +N+ RL ++ D IKIDG FVK++ T+ IV SI Sbjct: 415 RYLHQEGFKIAIDDFGFENSNFGRLIDMEVDYIKIDGSFVKNMETDDRSYKIVDSIAKFC 474 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR--PQPL 727 K+ +AE+V +Q Q + LG+ Y QGY G+ P+PL Sbjct: 475 KSIGAKSIAEYVHSQGVQERVLALGIDYSQGYFFGKATPKPL 516 >UniRef50_Q31HK1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HK1_THICR Length = 864 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 112/465 (24%), Positives = 214/465 (46%), Gaps = 31/465 (6%) Query: 284 GVET----EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 GVET E S + ++ +++ V ++ ++ ++ + A DPLT L N R Sbjct: 382 GVETFPPKESSRSVVVESILTTLVNVIGSIKAINK---FTKELEYYATRDPLTHLFNQRV 438 Query: 340 LEQAPEQEAGK------SFCCLRID--NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + E + SF L ID N + ++ YG +++ + +++E + Sbjct: 439 FHELLAYEVTRAHAHRYSFGLLMIDFDNFKLINDQYGHAFGDEVLQAFANAIQQVLREGD 498 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS----RQIHWNNTGLDMGYGAAWGRFDGN 447 + G E ++L + + ILN+ + I + + M + + Sbjct: 499 IFARYGGDEFCVILPESQMDDVKSMSYKILNATSDLKMIEPKGSVVTMTCSVGVSLYPDH 558 Query: 448 QETLQPL-LGQLSWLAEQSCAHHHVLALDSREEMVS--GQTTKQVLLLNTIRTALDQGDL 504 + + L + + L + L+ E++V ++ Q L I +L+ G+ Sbjct: 559 AKDKEDLFMVADNMLYRVKDNGKNSLSYPEEEDLVEVYKESNDQSLF---IMHSLETGEP 615 Query: 505 LL-YAQPIRNKE-GE-GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 + + QPI E GE E+L RL+ +G +++ +F+ L + DL +++ L Sbjct: 616 IEPHYQPIICMETGEIAVHELLMRLRQNGELISASRFIETAEHMGLVNQMDLVLIDKALA 675 Query: 562 WLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + D +G F +NL P ++ +I L ++Y + + ++ EITE + N Sbjct: 676 QVQI--SDYRGLVF-INLSPKAIVASEFIAKIKGLTEKYEVHHERIVFEITERETVHNIA 732 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + +L GFR AIDDFG+G+++++ LKR D IKI+G F+ ++ N +D V Sbjct: 733 LLEKFVRELRSEGFRFAIDDFGSGFSSFQYLKRFPVDFIKIEGEFINNMSKNKIDLAFVE 792 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 S +A + + +AEF+E ++ L+ +LG+ Y QG+L+ PQP Sbjct: 793 SAVSMATSLGIKTIAEFIENKETLLLVKQLGIDYAQGFLLATPQP 837 >UniRef50_B2V6C7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sulfurihydrogenibium RepID=B2V6C7_SULSY Length = 638 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 100/425 (23%), Positives = 197/425 (46%), Gaps = 34/425 (8%) Query: 322 WHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 + ++ TD LT L N L+ + + ID + ++ YG + ++S+ Sbjct: 226 YKQRSFTDNLTGLYNRNYLQHI--MDFKYIIALIDIDYFKKINDTYGHAIGDKVLKSVAN 283 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWN------------ 429 T+ L +E + + G E LL L+ + + +Q M+N+ +I N Sbjct: 284 TMKKLTREEDIFIRYGGEEFLL-LAKVDRKQDIQVMLNLF--ERIRSNIEKLKIPITDGD 340 Query: 430 --NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 T + +G + E ++ ++ +S + + D +E K Sbjct: 341 YIKTTISIGVYLNTNKDKNINEAIKK--ADVALYKAKSKGRNRIEIYDEEKE-----AEK 393 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRNKEGEG---YDEILARLKYDGGIMTPDKFLPLIAQ 544 +++ + ++ A+++ LL Y QPI + + Y+ ++ + +G ++ P FL +I Sbjct: 394 KLITVVEVKDAIEENRLLCYYQPIVDLKVNNISHYEALVRIIDKNGNVVPPFNFLNVIEN 453 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 + + V++ L H K + S+NL +L ++I ++ + K I+ Sbjct: 454 TFIYTKLTKAVIDYNYNILKKH----KNLKVSINLKQADVLNRSIVDYLLSISKEKDITE 509 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + +I EI E + E S+ I+QL + G+ I +DDFG+GY+N+ L RL D +KID Sbjct: 510 RMLI-EIVETEDLLAYEESLEIIKQLKEAGYSICLDDFGSGYSNFVYLLRLNVDYLKIDA 568 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 +K+IV + + +VR I K + +AE+VE ++ ++ +L + Y QGYL +P Sbjct: 569 NLIKNIVNDDVSYEVVRMIAQFCKKMKIKTIAEYVENEEILGIIKELDIDYGQGYLFSKP 628 Query: 725 QPLAD 729 +P+ + Sbjct: 629 KPIEE 633 >UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJT4_ALKOO Length = 504 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 107/422 (25%), Positives = 205/422 (48%), Gaps = 38/422 (9%) Query: 329 DPLTLLPNFRALEQAPEQEAGKS------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 + LT LPN +LE+ E+ G+S C+ +D + ++ G + + I Sbjct: 85 NTLTNLPNKISLEKRFEEMLGRSPKENFNILCIDVDGFKMVNDTLGYEIGDQILVRIAER 144 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN----------ILNSRQIHWNNTG 432 L + + +L+ + G E +L++ ++ ++Q + + + ++IH + Sbjct: 145 LKKTINKEGELFHIRGDEFVLLIQKEDSMEKIQKLSETIIKAMAMSFVFSEKEIHLTVSV 204 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLA----EQSCAHHHVLALDSREEMVSGQTTKQ 488 GY WG + N LL Q + +A ++S H++ DS ++ + ++ Sbjct: 205 GIAGY--PWGGSNLN------LLLQNAHIAVQAAKESSKSKHLVYDDS----MNIKMNRK 252 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDG---GIMTPDKFLPLIAQF 545 + L+N + AL++ + LY QP + E + A L++ G ++P +F+P+ + Sbjct: 253 LELINNLHKALEKKEFELYYQPQIDSETNEIVGLEALLRWQNPTLGRVSPAEFIPVAEET 312 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL++ AT + P SVN+ + + +++ + K ++P Sbjct: 313 GLIIPIGDWVLKTACAQNATWQKEGYKPIPVSVNISTIQFNEPLFVDKVVTILKETTLNP 372 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + + LEITE A ++A ++ + +L K G +IA+DDFGTG+++ L + + +++KID Sbjct: 373 KWLHLEITESVAINDATLTINVLNRLQKIGVKIALDDFGTGFSSLGYLSKFKINVLKIDS 432 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+DI + ++ I ++I L K ++ VVAE VET +Q L G +QGYL P Sbjct: 433 SFVQDIGED--ESTITKTIIVLGKNLNMEVVAEGVETNEQLDYLKNAGCDIIQGYLFSSP 490 Query: 725 QP 726 P Sbjct: 491 LP 492 >UniRef50_C7LR02 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LR02_DESBD Length = 1158 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 129/246 (52%), Gaps = 5/246 (2%) Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLP 540 Q + V L N +R AL + + L+ QPI G+ G++ ++ G + P +F+P Sbjct: 894 QVVQTVQLENDLRQALVEDEFELFFQPIYALSGQKLRGFEALIRWNHPQRGHLPPGEFIP 953 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKG--PRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + L V+ + LA G S+NL P LLQ ++ + L Sbjct: 954 VAEETGLVTEIGKWVMRRGCRVLAGWQSQFPGLDISLSLNLSPKDLLQASLVPVLTELLH 1013 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + + LEITE N E + +E+L K GF+IA+DDFGTGY++ L+RL D Sbjct: 1014 ETGLDARHLKLEITETAVMDNPEQATSRLERLQKMGFQIAMDDFGTGYSSLSYLQRLPID 1073 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 I+KID FV+ ++ N + I+++I L K L +VAE VET+QQ L +LG QG Sbjct: 1074 ILKIDRSFVQTMLENPNNLEIIKAIIGLGKILDLRIVAEGVETRQQLETLQELGCDLAQG 1133 Query: 719 YLIGRP 724 +L+GRP Sbjct: 1134 FLLGRP 1139 >UniRef50_B7AQW5 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AQW5_9BACE Length = 718 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/256 (30%), Positives = 139/256 (54%), Gaps = 16/256 (6%) Query: 485 TTKQVLLLNTIRTAL--DQGDLLLYAQPIRNKEGEGYDEILARLKYDG---GIMTPDKFL 539 + KQ+ + N +R A+ + + +++ QP+ + A ++++ G M P +F+ Sbjct: 457 SIKQLDIENNMRQAVASECDEFIVFYQPVVDAVTRECVSCEALIRWNSKALGFMAPGEFI 516 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPC---DKKG-P--RFSVNLMPLTLLQKNIAGRI 593 PL L +LE A C ++ G P R ++NL + L+QK++ + Sbjct: 517 PLAEYLGLITSIGDFILEE-----ACRQCKDWNEHGFPDFRININLSVVQLMQKDVVDNV 571 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 ++ R ++P ++LEITE A ++ E M ++ L + G +IA+DDFGTGY++ +K Sbjct: 572 KKILDRTGVNPHNIVLEITESFAINDMERVMNIVKGLRRLGPKIALDDFGTGYSSLNYIK 631 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 +L DIIK+D F+ DIV + V+ I +L+K + E VE+++Q +L ++GV Sbjct: 632 QLPLDIIKVDKTFIDDIVDDDYAKAFVKLIVELSKTIGTKICVEGVESREQYEVLSQIGV 691 Query: 714 QYLQGYLIGRPQPLAD 729 Y+QGY G+P P+ + Sbjct: 692 DYIQGYYFGKPVPVGE 707 >UniRef50_Q73RG0 HAMP domain/GGDEF domain/EAL domain protein n=1 Tax=Treponema denticola RepID=Q73RG0_TREDE Length = 801 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 103/393 (26%), Positives = 178/393 (45%), Gaps = 22/393 (5%) Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE----NEKLYQLPGSELLLVLSGPET 410 L ID + +++ +G I+ I +L ++ + + G E + G E Sbjct: 400 LDIDKFKTINQLWGYYAGNALIQHIYSMILAHIKSFNIPEDSFMHVIGDEFSIFYFGNEE 459 Query: 411 E--GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 E Q +++ +NS WN L + ++ Q ++ A +C+ Sbjct: 460 EVCRFTQTLIDKINSEYFTWNEKKLTISISVGIVNIPKIPQSSQEIISN----AYDACSI 515 Query: 469 HHVLALDSREEMVSGQTT-----KQVLLLNTIRTALDQGDLLLYAQ---PIRNKEGEGYD 520 E ++S T LNTI+ AL + + +LYAQ P+ + Sbjct: 516 AFRKGGGCYELLLSSGITGFSRGNISFWLNTIQKALKEDNFVLYAQAIMPLNDLLHRPKY 575 Query: 521 EILARLKY-DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA--THPCD-KKGPRFS 576 EIL RLK D I+ PD F+P+ ++NL D V+ + + A T D + FS Sbjct: 576 EILIRLKTNDDHIIMPDVFIPIAERYNLIYEVDKWVIRNAFAFFAEATSKGDLNEDAIFS 635 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 +N+ + ++ I K ++ EITE A N E++ + +L K GF Sbjct: 636 INISADSFFSNDLVEFIAESRKTLNVPAHNFCFEITESCAVRNLEATSTFVTELRKQGFS 695 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++DDFG G++++ LK L D +KIDG F+K I + +D +V+++ D+ L + Sbjct: 696 FSLDDFGKGFSSFPYLKTLPIDYVKIDGSFIKSIDKDYIDFSMVKTMRDMCYHLGLYTIG 755 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E+ ET + ++L +GV Y QGY +P P+A+ Sbjct: 756 EYAETDKIVSILKDIGVDYGQGYAFQKPIPIAE 788 >UniRef50_A8ERQ1 EAL/GGDEF/PAS domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERQ1_ARCB4 Length = 538 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 102/417 (24%), Positives = 187/417 (44%), Gaps = 22/417 (5%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 L + A D LT LPN + + + ID+ + ++ +G ++ Sbjct: 137 LKEKNEKLAYYDQLTTLPNRQKIILDINTNFPTACIVFNIDDFKEINDFFGTENADKILQ 196 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLV----LSGPETEGRLQHMVNILNSRQIHWNNTGL 433 I L +Y++ G E ++ LS + + + Q ++ + + + + + Sbjct: 197 DIANRFLDYKY---IVYRIDGDEFAILFYENLSIDQLKSQAQKILTLFDEEPFYVEDQTI 253 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 +G+ + N LL ++ + +++ E + + + + + Sbjct: 254 SIGFSIGIAKAKDN------LLTKVDIAVNNAKNSSSDISVYEESENIEKKYKQNLEMAT 307 Query: 494 TIRTALDQGDLLLYAQPIRNKE-GEGYD-EILARL-KYDGGIMTPDKFLPLIAQFNLSAR 550 +I+ AL + ++ + QP+ + E GE Y E L R+ DG I+ P KFL + L + Sbjct: 308 SIKEALLEDRIVCHYQPLIDIETGEIYSFETLVRMIDKDGNIIPPIKFLDFSKKVKLYSS 367 Query: 551 FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 +V++ A + FS+NL + K II+ + + + V E Sbjct: 368 ITRKVIKE-----ACETFKHRNENFSINLNIADIKDKETVKEIIKNITETNTASK-VTFE 421 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 I E + N + + I Q+ G +IAIDDFGTGY+N+E L RL + IKIDG +K+I Sbjct: 422 ILESEGIENYDEVISFINQIKALGAKIAIDDFGTGYSNFEHLLRLDVNYIKIDGSLIKNI 481 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++ +IV +I A+ + VAEFV +Q ++ ++GV QGY IG+P+ L Sbjct: 482 ASDEKHRIIVETIVSFARRIGIKTVAEFVADKQILEIIKEIGVSCAQGYYIGKPEKL 538 >UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1N8_SHEAM Length = 817 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 89/251 (35%), Positives = 135/251 (53%), Gaps = 8/251 (3%) Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD-EILARLKY-DGGIMTPDKFLPL 541 + T+ + L N +R A+++ L L QPI N +GE E L R + + G ++P +F+P+ Sbjct: 553 KATENLWLQNELRHAIEREQLSLVFQPIFNHDGELVCCEALCRWHHPERGPISPAQFIPV 612 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFK 598 L VL + + L +KG P +VN+ Q + R++ L K Sbjct: 613 AEDSGLIIGIGQWVLLEVCRTLKA--MSEKGTPMPAVAVNISARHFNQIDFVERLLALLK 670 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + +SP + LE+TE SN + +++L GF IAIDDFGTGY++ L+ L Sbjct: 671 AHQVSPAQIELELTEYALLSNLNAISERMQRLRSAGFSIAIDDFGTGYSSLSYLQSLPLS 730 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +K+D FV I T +A IVR+I D+A + L VVAE VET+ QQA L L + QG Sbjct: 731 RLKLDAAFVGRIGTEAGNA-IVRAIVDMAHSLMLKVVAEGVETEAQQAYLSSLECDFFQG 789 Query: 719 YLIGRPQPLAD 729 YL+G+P P ++ Sbjct: 790 YLLGKPMPASE 800 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 117/432 (27%), Positives = 198/432 (45%), Gaps = 32/432 (7%) Query: 323 HLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 HL A D LT LPN R A+ + E + + +DN + ++ G M Sbjct: 575 HL-AFYDALTGLPNRRLLHDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDR 633 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSG----PET---EGRL--QHMVNILNSRQ 425 ++ + + L ++E + + +L G E +++L PE + R+ + ++ +LN Sbjct: 634 LLQQVGQRLSSSVREGDTVARLGGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNR-- 691 Query: 426 IHWNNTGLDMGYGAAWG--RFDGNQETLQPLL--GQLSWLAEQSCAHHHVLALDSREEMV 481 ++ +G D + G F G Q + L+ L+ ++ + + D R + V Sbjct: 692 -PYDLSGHDYHNTPSVGITLFGGQQVGIDELMKRADLAMYEAKASGRNALRFFDPRMQAV 750 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFL 539 T + + +R A+ + L QP + G+ G + +L G ++P +F+ Sbjct: 751 ---VTARADIEKDLRAAVGRQSFFLAYQPQVDASGQVIGAEALLRWQHQQRGTVSPAEFI 807 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF--SVNLMPLTLLQKNIAGRIIRLF 597 P+ + L L VLE+ A RF SVN+ Q N +++ + Sbjct: 808 PVAEETGLILPLGLWVLETACAQAALWAARPGRERFTVSVNVSARQFRQANFVDQVLAVL 867 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 R P+ + LE+TE N + + + L G ++DDFGTGY++ LK+L Sbjct: 868 ARSGAHPRNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPL 927 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID FV+D++T+ D +I R+I LA+ LSV+AE VE+ +QQ L G Q Sbjct: 928 DQLKIDQSFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQ 987 Query: 718 GYLIGRPQPLAD 729 GYL RP LAD Sbjct: 988 GYLFSRPLALAD 999 >UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTV0_CHRVO Length = 1390 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 119/416 (28%), Positives = 204/416 (49%), Gaps = 27/416 (6%) Query: 329 DPLTLLPNFRALEQAPEQ------EAGKS--FCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT +PN R L Q +G+S C L +D + ++ YG + + ++ Sbjct: 955 DPLTGVPNRRLLSDRLRQAIVRANRSGRSCAVCFLDLDGFKAVNDKYGHAVGDQLLVTVS 1014 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLS---GPETEGRLQHMVNILNSRQIHWNNTGLDMGY 437 L +++ ++ L +L G E +++LS PE + V SR + + ++G Sbjct: 1015 NNLKSILRGDDTLARLGGDEFVVLLSEVGSPEECMLVLDRVLATASRPMPVGDA--EVGV 1072 Query: 438 GAAWG-----RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 A+ G + + + +TL Q +LA+ + + + L D E Q +Q L L Sbjct: 1073 TASIGVSLYPQDNVDPDTLLRHADQAMYLAKDAGKNRYQL-FDP-ENDRKAQEHRQFLEL 1130 Query: 493 NTIRTALDQGDLLLYAQPIRN-KEGEGYD-EILARLKYDG-GIMTPDKFLPLIAQFNLSA 549 +R AL + L+ QP+ + + GE E L R ++ G++ P +FLP ++ L A Sbjct: 1131 --LRQALVHDEFALFYQPVVDLQSGEIISVEALIRWRHPRRGLLAPAEFLPHLSGNELEA 1188 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY-HISPQAVI 608 F L VL++ L ++ + S N+ LL+ + + ++ + RY ++ P + Sbjct: 1189 AFGLWVLDAALSQVSRWAEAGFHIKISTNVSTNYLLRTDFSQQLSTVLGRYPNVPPWHLE 1248 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEI E A + E ++ +++ + G A+DDFGTG+A+ L+RL D +KID FV Sbjct: 1249 LEIVE-SASGDVEQTIRVLQRCRELGVHFALDDFGTGHASLTHLRRLPVDTLKIDNSFVH 1307 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 D++ + D IV + +LA + +AE VET + ALL LG Y QG+ I RP Sbjct: 1308 DMIGSQDDRRIVEGVIELASIFARKAIAEGVETMEHAALLRSLGCHYAQGFGIARP 1363 >UniRef50_C9QFQ1 Sensory box/GGDEF family protein n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QFQ1_VIBOR Length = 831 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 109/418 (26%), Positives = 197/418 (47%), Gaps = 24/418 (5%) Query: 329 DPLTLLPNFRALEQ--APEQEAGKSFCC------LRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN L Q A E + CC + +D+ + ++ YG + I Sbjct: 403 DELTGLPNRSLLHQHIANGIEMSAAQCCQLAVMFVDLDDFKKVNDLYGHSAGDRLLSEIG 462 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSG----PETEGRLQHMVNILNSR-QIHWNNTGLDM 435 + + N+ + + G E + S ETE +++ + N+ + I Sbjct: 463 KKFDAFLGPNDYVARFGGDEFIFCFSNLKNLSETESKVEQIKNVFRQQFVIDGKVIFASC 522 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH--VLALDSREEMVSGQTTKQVLLLN 493 G + DG+ + L+ + + +S A VL DS ++ Q LL Sbjct: 523 SIGVSMYPSDGDDP--EELISKADIVLYKSKARQKGDVLFFDSS---INQQVQYDFLLER 577 Query: 494 TIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R A+D+G+L + QP + K GE G + +L G ++P +F+ L + L R Sbjct: 578 ELREAIDRGELTVSYQPQVNAKTGELYGVESLLRWYNPQLGQVSPLEFISLAEEIGLIGR 637 Query: 551 F-DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 + + ++ +++ P S+N+ P+ L+ ++ + ++ + + + L Sbjct: 638 IGEFVINKACEEFVQVFPSPDSELILSINISPMQLMYSGFIQQLQSITDKHQLPSRRITL 697 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 EITE ++ I Q+ + GF +++DDFGTGY++ L L D +KID VFV Sbjct: 698 EITENVLINDLPKVAPVINQVKELGFTVSLDDFGTGYSSLSYLSNLPLDELKIDRVFVDK 757 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 ++++ +V++I +A++ ++ VVAE VET+ Q+A+L + G LQGYLI RP P+ Sbjct: 758 MLSSEQSDSLVKAILAIARSANMRVVAEGVETEAQRAVLIEYGCDLLQGYLIERPIPI 815 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 110/427 (25%), Positives = 192/427 (44%), Gaps = 38/427 (8%) Query: 329 DPLTLLPNFRALEQAPEQEA-------GKSFCC--LRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN R L Q +A G+ F + +D+ + ++ G + ++++ Sbjct: 576 DGLTGLPN-RVLFQDRVHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAV 634 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSG---PETEGRLQHMVNILNSRQIHW----NNTG 432 + L ++ ++ + +L G E +++LS E +G + IL RQ+ T Sbjct: 635 AQRLTGALRASDTICRLGGDEFVVLLSDLDDVEVDGVAEVAKKIL--RQVAQPCVLGGTE 692 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWL----AEQSCAHHHVLALDSREEMVSGQTTKQ 488 +++G F G+ E L+ + + +H + + V + + Sbjct: 693 VNVGASLGIALFPGDGEDPDTLMKRADAAMYRSKREGRNRYHFFS-----KAVDDAASAR 747 Query: 489 VLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + L +R AL G +++ QP+ R ++ + +L + G+ +P F+P+ + Sbjct: 748 LQLEADMRRALAAGQFIVHYQPVVHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVAEES 807 Query: 546 NLSARFD----LQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L Q E L W T G +VN+ P+ L Q + + + Sbjct: 808 GLIVPMGHWVLRQACEQLRAWSGTA---LGGISVAVNVSPVQLAQADFVDTVADVLHATG 864 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + EITE + E+++ + +L G RIAIDDFGTGY++ LKR D +K Sbjct: 865 VDGSRLEFEITESTLMQDPEATLEMLRRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTLK 924 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D+ + D +VR+I +A++ L VVAE VET+ Q A+L + QGYL Sbjct: 925 IDHTFVRDLEADADDRELVRAILAMARSLRLHVVAEGVETEAQAAILAAMECPAFQGYLF 984 Query: 722 GRPQPLA 728 RP A Sbjct: 985 ARPAGAA 991 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 127/248 (51%), Gaps = 22/248 (8%) Query: 495 IRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R A+ Q L +Y QP + + + G + +L + G ++P F+P+ + L Sbjct: 689 LRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIAEETGL---- 744 Query: 552 DLQVLESLLKWLATHPC------DKKG----PRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + + W+ C +G P +VNL L Q N A R++ + + Sbjct: 745 ----INEIGDWVLRQSCLQARLWQAQGYDIVP-IAVNLSARQLKQDNFAARVVTILREAG 799 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + ++LEITE S ES + +EQL G R+A+DDFGTGY++ RLK L D +K Sbjct: 800 LDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLK 859 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+DIVT+ DA IV + LA A +L V AE VETQ+Q + L + QGYL Sbjct: 860 IDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLF 919 Query: 722 GRPQPLAD 729 RP P ++ Sbjct: 920 SRPIPASE 927 >UniRef50_Q0KDS7 Predicted signal transduction protein containinga membrane domain, an EAL and a GGDEF domain n=4 Tax=Cupriavidus RepID=Q0KDS7_RALEH Length = 1132 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 106/432 (24%), Positives = 196/432 (45%), Gaps = 29/432 (6%) Query: 318 LNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGL 369 L R A+ D LT LPN A + A + C + +D + ++ G Sbjct: 682 LQRELARSAMHDALTGLPNRTWFEKRLREACDAARLHGHRAALCFIDLDRFKIVNDTAGH 741 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---PETEGRLQHMVNILNSRQI 426 +R + + ++ ++ L +L G E L+L + E Q +++ + R+ Sbjct: 742 GAGDVLLRELGYMIRNHVRPDDVLARLGGDEFALLLKDCTVDQAEQVCQGVIDAIRGRRF 801 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC-----AHHHVLALDSREEMV 481 W DMG D + P + +L A+ +C A +++ R+E Sbjct: 802 PWEGRVYDMGASIGIAAIDLDV----PPVSELMSRADVACYAAKAAGRSRVSVYRRDESD 857 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIR------NKEGEGY--DEILARL-KYDGGI 532 + + +++ + I +AL+ L+AQ IR N++G + EIL R+ G + Sbjct: 858 ARRHHRELEVAAGIHSALEANRFRLFAQEIRALQPEENEDGAEHCHIEILVRMVDEHGDL 917 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGR 592 + P F+P +++L D V+ ++L+ G S+NL +L + + Sbjct: 918 IMPGAFIPAAERYDLMGHVDRWVIRNVLRGYGERLGAVPGLSVSINLSANSLGEPFLLPF 977 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + + LEITE +N ++ + ++ + G +++DDFG+G +++ L Sbjct: 978 LHAELEASALPASRIRLEITETALINNMAAANRLVTEMRRAGCTVSLDDFGSGLSSFAYL 1037 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K+ D +KIDG F++ + N +D IV SI D+ + VAE+VE ++ L +G Sbjct: 1038 KQFPVDFLKIDGSFIRQLADNAVDREIVSSINDIGHRLGVRTVAEWVEDERTLDALRAIG 1097 Query: 713 VQYLQGYLIGRP 724 V Y QGY+IGRP Sbjct: 1098 VDYAQGYVIGRP 1109 >UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47K14_DECAR Length = 783 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 116/437 (26%), Positives = 201/437 (45%), Gaps = 61/437 (13%) Query: 326 ALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL--RIDNLEFMSRHYGLMMRVHC 375 A DPLT L N RA A +++A +S L ID + ++ +G + + Sbjct: 363 AERDPLTGLAN-RARFAAELDRLVSRFQRDATQSGAVLYFDIDEFKTINDTFGHRVGDNV 421 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDM 435 + + L++ E L +L G E +V G + +G +Q M + ++ TGL Sbjct: 422 LVRTADVVSKLVRTGELLARLGGDEFAIVAPGADLDG-VQAM-----AERVVKALTGLSF 475 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA---------------------- 473 FDG + L LG ++ L E + + ++A Sbjct: 476 -------EFDGKRFGLTISLG-IALLPEHAASAEELVAHADAAMYQAKRSGKNCWRIYRP 527 Query: 474 -LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 LD M+S Q+ + I+ AL++ L+L+ Q + + Y+ ++ + D Sbjct: 528 DLDESSHMLS-----QLGWNDKIQAALNENRLVLHFQGVHVTATRAISHYEALVRMIDPD 582 Query: 530 G--GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 ++ P F+P + D V+ + + LA P P ++N+ + Sbjct: 583 NPDELLQPGSFIPAAERTGRIVDIDRWVIGTAIHKLAGMPS---LPALAINVSARSFDDP 639 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 +A I L +H++PQ +I+E+TE A +N S I+ L + G + +DDFG G++ Sbjct: 640 TLARTISDLLTEFHVNPQRLIIELTETAALANIRDSERFIDDLRRLGCTVCLDDFGVGFS 699 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 ++ LK L AD++KIDG+F++++V+N D + VR+I ++A+ VAEFV AL Sbjct: 700 SFAYLKHLSADVLKIDGMFIRNLVSNREDQVFVRAIVEVARGLGKKTVAEFVGDAPTLAL 759 Query: 708 LHKLGVQYLQGYLIGRP 724 L +LGV Y QGY + P Sbjct: 760 LGELGVDYAQGYYLSFP 776 >UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacillus cereus group RepID=Q81HZ8_BACCR Length = 567 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 113/424 (26%), Positives = 204/424 (48%), Gaps = 15/424 (3%) Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQ------APEQEAGKSFCCLRIDNLEFMSRH 366 HR R+ A D LT LPN L A ++E G + +D + ++ Sbjct: 133 HRLRLSESRYRELAYHDALTSLPNRLQLITTVNELIADKKEFGMIY--FDLDRFKLVNDT 190 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQI 426 G M+ + + L ++ E + L +L G E +L+ + Q ++L+ Q Sbjct: 191 LGHMIGDLLLSEVASRLHYVLGEKDVLARLGGDEFVLLTKNHRQDDMSQLATSVLSCFQA 250 Query: 427 HWNNTGLDMGYGAAWG--RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + G ++ A+ G + + + ++ LL S LA S A + + + Sbjct: 251 PFMLEGHEVYISASLGLCSYPQDGQDVETLLKN-SDLAMYSAKEQGRNAACFFTDELRAK 309 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD--EILARLKYDGGIMTPDKFLPLI 542 +++ + ++ A+ +L + QPI + + + Y E L R + G ++P +F+P+ Sbjct: 310 INRRMKVEFALQKAIRDEELDVALQPIIDLKTKRYSGIEALVRCMTEDGPISPSEFIPVA 369 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L + VLE + T P ++G + SVNL L+QK + + KR Sbjct: 370 EESGLIIKLGDWVLEKSCRLFKTLPNYQEGLKLSVNLSIQQLMQKRFILSVRSILKRTGF 429 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 P +ILEITE A + + + +++L G IA+DDFGTGY++ LK+L DI+KI Sbjct: 430 PPNRLILEITESIAVRHFDYIIATLQELRNMGVLIALDDFGTGYSSLYYLKQLPLDIVKI 489 Query: 663 DGVFVKDIVTNTL--DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 D F+++ + + IV+S+ ++A + +L+VVAE VET +Q++LL + Y+QG+ Sbjct: 490 DRNFIREFHYDHAQPERTIVKSVIEIAHSLNLAVVAEGVETVEQESLLQSMSCDYVQGFY 549 Query: 721 IGRP 724 +P Sbjct: 550 YAKP 553 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 123/441 (27%), Positives = 197/441 (44%), Gaps = 48/441 (10%) Query: 323 HLQALTDPLTLLPNFR----ALEQA--PEQEAGK--SFCCLRIDNLEFMSRHYGLMMRVH 374 H A DPLT +PN R L+QA + +G+ + + ID+ + ++ G + H Sbjct: 288 HHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGALLIIDIDHFKTLNDTLGHDVGDH 347 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLS--GPETEG------------RLQ-HMVN 419 + + R L ++E + + G E +++L G E EG RL+ Sbjct: 348 LLVEVARRLSACIREGDTAARQGGDEFVVMLEELGSEQEGAAVQAEIVAEKIRLELARPY 407 Query: 420 ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ--LSWLAEQSCAHHHVLALDSR 477 +LN ++ + + + F G ++T+ LL Q ++ + + + D+ Sbjct: 408 LLNGDTEYFRSASIGISL------FFGQEKTIDILLKQADIALYKAKDAGRNAIRFFDT- 460 Query: 478 EEMVSGQTT--KQVLLLNTIRTALDQGDLLLYAQP----IRNKEGEGYDEILARLKYDGG 531 + QTT ++ L +R AL + + +LY QP +R G E L R + G Sbjct: 461 ----AMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAVRRLIGA---EALLRWQPPGR 513 Query: 532 IM-TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR--FSVNLMPLTLLQKN 588 M P+ F+PL + L + VL+ L D + SVN+ Q + Sbjct: 514 AMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFLSVNVSARQFRQAD 573 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++ R+ +P+ + LE+TE N E + ++ L G R ++DDFGTGYA+ Sbjct: 574 FVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGVRFSLDDFGTGYAS 633 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR + +K+D F++DI N DA IVR+I + LSVVAE VE Q A L Sbjct: 634 LSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVVAEGVEDDLQHAYL 693 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 K QGYL GRP D Sbjct: 694 VKHECSLFQGYLFGRPMSFDD 714 >UniRef50_A3UFJ0 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFJ0_9RHOB Length = 686 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 121/429 (28%), Positives = 194/429 (45%), Gaps = 29/429 (6%) Query: 316 EWLNRRWHLQALTDPLTLLPN---FRAL-EQAPEQEAGKSFCCLRIDNLEF--MSRHYGL 369 E +RR AL D +T LPN F AL EQA E GK+ L ID F ++ +G Sbjct: 240 ERTDRRLRHLALHDIVTDLPNRACFTALVEQAIENRKGKNIAVLVIDLNRFKEINDVWGH 299 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS------ 423 + I L + +L G E +V E E L + ++ S Sbjct: 300 QAGDAVLCDIADRLRGHERPGGYAARLGGDEFGIVFP-VEGETELVEELKLIESLFMTPV 358 Query: 424 RQIHWN---NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 R + N L + GR + ETL + + LA + + E Sbjct: 359 RHADFEIVTNASLGVAVYPEDGR---DCETLM----RNADLAMYKAKTDPLNRIQHYEHA 411 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYDGGIMTPDK 537 + ++ L +RTAL+ G+L ++ QP I K GE GY+ ++ G+++P + Sbjct: 412 LGEAVRQRRELAQDLRTALETGELRMFYQPQIDLKSGEVCGYEALVRWPHPVRGMISPAE 471 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+PL L R VLE+ + +A P P+ ++NL + L ++ G++++ Sbjct: 472 FVPLAEANGLIGRLGDWVLETTCEEVAQWP---GAPKVAINLSAIQLNDPHLVGKVLQAM 528 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 +SP + +E+TE + S+ + ++ G +A+DDFGTGY+ E L+R Sbjct: 529 VSTGLSPSQLEIELTETALIHDLGQSLNVLRRIKALGVSMALDDFGTGYSALETLRRFPF 588 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D IK+D F + ++ ++ LA + V+AE VET Q LL+ +G + Q Sbjct: 589 DKIKLDKGFTDGLSDGGRSRAVISAVVTLAHNLDIPVLAEGVETADQLDLLNMMGCEQAQ 648 Query: 718 GYLIGRPQP 726 GYLIGRP P Sbjct: 649 GYLIGRPAP 657 >UniRef50_A3JH20 PAS sensor diguanylate cyclase and phophodiesterase n=2 Tax=Marinobacter RepID=A3JH20_9ALTE Length = 295 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 83/243 (34%), Positives = 123/243 (50%), Gaps = 5/243 (2%) Query: 492 LNTIRTALDQGDLLLYAQPIRN--KEGEGYD-EILARLK-YDGGIMTPDKFLPLIAQFNL 547 LN I+ AL + L AQ I K G G E+L RLK +G + P FLP +F + Sbjct: 40 LNRIQVALQENRFFLDAQLIAPTVKGGRGLRYEVLVRLKDKEGKTIPPGAFLPAAERFGI 99 Query: 548 SARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 + + D V+ + + LA H + +NL + Q + A +I + Y +S Sbjct: 100 AHKIDRWVINEVFRQLAAHTAHLNELDACHINLSGRSFDQPDFAEFVIERLQHYGLSGGK 159 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + E+TE A N + + L A+DDFGTG +++ L+RL D +KIDGVF Sbjct: 160 ICFELTETAAIHNFADAQNFMALLGDSKCSFALDDFGTGLSSFSYLRRLPVDYLKIDGVF 219 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V+DI T+ D +VR+I D+ K +AEFVE + LL ++GV + QGY + RP Sbjct: 220 VRDIATDQTDLAMVRAINDIGKTLQKKTIAEFVENNETLELLKEMGVDFAQGYGLHRPCR 279 Query: 727 LAD 729 D Sbjct: 280 FQD 282 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 119/421 (28%), Positives = 200/421 (47%), Gaps = 27/421 (6%) Query: 329 DPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN RAL A E +A + L +D+ + ++ G + + + Sbjct: 435 DVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELA 494 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGR---LQHMVNILNSR-QIHWNNTGLDMG 436 + L +++ ++ L +L G E +L+L G E Q ++ +N +I + + Sbjct: 495 QRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAKKIAQELMRAINEPYRIGSHELNVMAS 554 Query: 437 YGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 G A DG + ETL + A+Q + A S + + +T+ + +LN + Sbjct: 555 IGIAVYPADGMDFETLCKNADVAMYRAKQEGRN----AYRSFTQEMQAYSTRYLQVLNAL 610 Query: 496 RTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R A+ Q L ++ QP I G+ G + +L + G ++P +F+P+ + L + Sbjct: 611 RQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIG 670 Query: 553 LQVLESLL----KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 VL + KW H +VNL + + ++++ K PQ + Sbjct: 671 EWVLRVAVAQAKKW---HQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLE 727 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LE+TE A + + ++ + LH+ G R++IDDFGTGY++ LK+ +A +KID FV+ Sbjct: 728 LELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVR 787 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 DI T+ D IV +I +AK L +AE VET +QQA L + G QGY +P P A Sbjct: 788 DISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAA 847 Query: 729 D 729 D Sbjct: 848 D 848 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 137/259 (52%), Gaps = 8/259 (3%) Query: 479 EMVSGQ----TTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGG 531 EM S + T ++ + N +R AL++ + +L+ QP + N E G + +L D G Sbjct: 751 EMYSSEINTLTMERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRG 810 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIA 590 I++P +F+PL + L VL+ + P+ SVN+ L +K+ Sbjct: 811 IVSPMEFIPLAEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFV 870 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + + Q + LEITE A N + SM +++L + G +IAIDDFGTGY++ Sbjct: 871 QAVKSILEDTQLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLA 930 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+L IKID F++D+ + D IVR+I +A + L+V AE VET+ Q+ +L + Sbjct: 931 MLKQLPISNIKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQ 990 Query: 711 LGVQYLQGYLIGRPQPLAD 729 YLQGYL +P P + Sbjct: 991 EKCNYLQGYLYSKPLPAEE 1009 >UniRef50_Q5QV37 Signaling protein with DMT-family integral membrane sensor domain, GGDEF and EAL domains n=2 Tax=Idiomarina RepID=Q5QV37_IDILO Length = 690 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 107/431 (24%), Positives = 200/431 (46%), Gaps = 17/431 (3%) Query: 309 VRIYHRSEWLNRRWHLQALTDP---LTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSR 365 VR R+E+L+ L +++ ++ +P F +E + + + + ++ Sbjct: 238 VRAIQRAEYLHTHDALTGVSNRDQLVSKIPLF--IEYCRSNNRQLTIMLIGVSRFKVVNE 295 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 + G+ ++ I R L ++ + ++ G + ++ ++ + L Sbjct: 296 NIGIRGGDQVLKEIARRLQNFRKQPLAVSRISGDVFAIAFDHLKSRSLIKDLAAELQDTL 355 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S+ I L++ G R+ + + LL + + +A H ++ E + Sbjct: 356 SKPIEVGEKTLNIAAGIGISRYPQHGSRSEVLLNKAT-IALTQAKQSHQPSVTVYERGMD 414 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFL 539 + V + +R A+ + + LY QP + + + G++ ++ D G+++P +FL Sbjct: 415 EMYSYLVDMEPILRRAMRENEFTLYLQPQFDFDHQQLCGFEALIRWQHPDRGLLSPAEFL 474 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRL 596 P I Q LS D VL LA+ K G P +VNL + ++ +L Sbjct: 475 PYIEQLGLSTELDDWVLNHAAAILASWK-QKFGLCWP-IAVNLSAPQFQHFQLIEKMQQL 532 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + Y ISP+ + LEITE A S+ + M I++L + GF I+IDDFGTG+++ L+ L Sbjct: 533 LEDYSISPEWLELEITENVAMSDLHNGMSVIQRLREMGFGISIDDFGTGHSSLAYLRSLP 592 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 + IKID FV ++ N D I++++ L+ V+AE +ET++QQ +L KLG + Sbjct: 593 INKIKIDRSFVSELQQNNNDVTILKAMIRLSHGLGKRVIAEGIETEEQQDMLQKLGCDMM 652 Query: 717 QGYLIGRPQPL 727 QGY P L Sbjct: 653 QGYFYSPPMRL 663 >UniRef50_Q2SPM3 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPM3_HAHCH Length = 826 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 121/456 (26%), Positives = 204/456 (44%), Gaps = 46/456 (10%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCL 355 L+ V I R E +R L A DPLT LPN + ++ A + + Sbjct: 368 ALIVSVDITDRVEAQSRVEQL-AFHDPLTGLPNRNLFYDRLTMDIARSRNHGAYGALLLI 426 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE---TEG 412 +DN + ++ G + +R++ + L + E + +L G E +++ PE T Sbjct: 427 DLDNFKNINDSLGHSVGDELLRNVAKNLRNCLDEEITVGRLGGDEFTVIM--PELGRTPE 484 Query: 413 RLQHMVNILNSRQIHWNNTGL-----------DMGYGAAWGRFDGNQETLQPLLGQLSWL 461 + N++ ++ + +T MG A + D N E + + Sbjct: 485 EAEQNANLIAAKVLSELSTPFFFNTQEFTVTASMGV-ALYPDKDANTEVILRYADTALFQ 543 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGE--G 518 A+ + + + EM +K++ + N +RTA+ L+ Y QP + +G G Sbjct: 544 AKHEGRNKVTIF---KAEMADA-VSKRLSIENELRTAVKDKALMFYYQPQVSVTDGRIIG 599 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNL--SARFDL--QVLESLLKWLATHPCDK---- 570 + ++ G++TPD+F+P++ NL +A D+ Q + +WL DK Sbjct: 600 AEALIRWNHPQRGLITPDEFVPVLENSNLILTAGLDMFTQACMQVKEWL-----DKGWWE 654 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + R +VN+ P Q +II + + + + LE+TE N + ++ + L Sbjct: 655 EDMRVAVNVSPKQFYQPEFVEQIIEILEATRLPAYCIELEVTESVVIQNVKDTINKMLSL 714 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G R ++DDFGTGY++ LKRL D +KID FV DI ++ DA IV +I +A Sbjct: 715 KGLGVRFSLDDFGTGYSSLSYLKRLPVDSLKIDRSFVTDINSDVNDAAIVSTILAMAAHL 774 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 L VVAE VET + L + Y QGYL +P P Sbjct: 775 DLEVVAEGVETVEHLEFLKENECDYYQGYLFSKPLP 810 >UniRef50_B1QUK2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Clostridium butyricum RepID=B1QUK2_CLOBU Length = 762 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 116/419 (27%), Positives = 199/419 (47%), Gaps = 31/419 (7%) Query: 329 DPLTLLPNFRALEQAPEQ--EAGKSFCC--LRIDNL----EFMSRHYGLMMRVHCIRSIC 380 D +T L N R+LE+ E K F C + IDN +F+ + G V CI I Sbjct: 346 DTVTRLLNRRSLEEIGENLIRDNKEFSCAFIDIDNFKKINDFLGHNTG--DEVLCI--IA 401 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGY 437 +L ++ ++ G E L+++ G + ++ MV + + I++ T ++ Sbjct: 402 DYILSYGKDKISCGRIGGDEFLVIIEGEGNKEKIIDMVKYMFDKLKDNIYFRGTSYNVKA 461 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH--HVLALDSREEMVSGQTTKQVLLLNTI 495 F + ET +L Q S +A + ++ + + RE S + ++L Sbjct: 462 SIGISYFPEHGETFSQIL-QNSDIAMYNVKNNERNNYCIFQRELFNSLEVESKIL----- 515 Query: 496 RTALDQGDLLLYAQPIRN-KEG--EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 + +G+ Y QPI + K G G E L R G+++P+KF+PL D Sbjct: 516 -EGIKKGEFEAYFQPIIDLKTGIINGA-EALIRWNTCEGVISPNKFIPLAKSNGYIIEID 573 Query: 553 LQVLESLLKWLATHPCDKKGPRF--SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 V+E K L D F S+N L QK ++ + +RY+I + + LE Sbjct: 574 KMVIEQSCK-LIRELIDNGIEDFQISINTSFKLLSQKRFLSNLMEVIRRYNIGVKNIKLE 632 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE++ + E + ++ + G +++IDDFGTGY+++ +K L D++KID ++D+ Sbjct: 633 ITEDETIEDLEYMTDLLRRIRECGIQVSIDDFGTGYSSFNYIKTLPLDVLKIDKSLLRDM 692 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + I+++I +LA +LSV E VET++Q LL KL +QGY + RP + D Sbjct: 693 EKDERTEHIIKTIINLAHILNLSVTCEGVETKEQFQLLEKLNCDNIQGYYLSRPLKIND 751 >UniRef50_B8KIK0 Diguanylate cyclaSe/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KIK0_9GAMM Length = 815 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 126/476 (26%), Positives = 210/476 (44%), Gaps = 33/476 (6%) Query: 283 QGVETEYSL-------AFILAV--LISFSVCLLYMVRIY---HRSEWLNRRWHLQALTDP 330 +GVE E SL AFI A L++ L+ + IY + L + A D Sbjct: 338 RGVEFEDSLSSPNGRRAFISAKFPLLASDSTLMGLAGIYTDISDRKALEEQLEQLAHFDS 397 Query: 331 LTLLPN--------FRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN + + Q+ Q + + L IDN + ++ G + ++ Sbjct: 398 LTGLPNRALARDRLAQGIAQSKRQGSRLAVLFLDIDNFKVINDSLGHHAGDELLLAMSGR 457 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-----QIHWNNTGLDMGY 437 L +++ + L +L G E L VL ++ N L + + N+ + Sbjct: 458 LRNILRGGDTLSRLGGDEFLAVLLDVKSREDAVFAANKLLATTKERFEALGNSVHSSLSI 517 Query: 438 GAAWGRFDGNQETLQPLLGQL-SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 G A DG ++ L+ + + + A +A R++ + T ++ LL+ +R Sbjct: 518 GLALYPEDG--LSIDELIQHADTAMYQAKSAGRGRVATYQRQQ--TSDVTTELHLLSELR 573 Query: 497 TALDQGDLLLYAQPIRN-KEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 A++ L+ QP N ++G G + +L + G + P F+P L A Sbjct: 574 DAIEHEQFELHWQPQVNLRDGSLCGAEALLRWKRPGAGCVLPQFFIPFAESHGLIAELGD 633 Query: 554 QVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + LK + FS+NL P L +++ + + ++P V+ EITE Sbjct: 634 WVLAAALKQIGIWAKQNSDATFSINLAPADLADDGFMPKVLGYCEEHKVTPSRVVFEITE 693 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + S+ E NI QL + GF ++IDDFGTG ++ RLK+ +KID FV+ I + Sbjct: 694 QDVLSSLELGRENIMQLRQQGFTLSIDDFGTGNSSLLRLKKFPFHELKIDQSFVQGIPED 753 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV++ +AKA + V+ E VET+QQ L +G QG+ GRP A+ Sbjct: 754 AESLAIVQATLSMAKALDMQVMTEGVETEQQAGFLLGIGCIKAQGFYFGRPVSAAE 809 >UniRef50_C1DVT2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DVT2_SULAA Length = 653 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 113/410 (27%), Positives = 196/410 (47%), Gaps = 30/410 (7%) Query: 329 DPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL-M 387 D LT LPN L + + + ID+ + ++ YG+ + + ++ L + Sbjct: 259 DKLTNLPNRIKLMEDLKNLKEYKVIIVNIDSFKEINDVYGIKIGDMLLNALGNRLKDIGK 318 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL----NSR--QIHWNNTGLDMGYGAAW 441 + N +Y+L G E L+++ + L+ +VN + S+ +I + +D+ GAA Sbjct: 319 KHNFNVYKLSGDEFLILIDRFYPKTFLESLVNEIFYEVQSKPFEIEGLSIPIDITIGAAE 378 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLL--LNTIRTAL 499 G D + L+ L + A+QS + + D E + Q Q + + ++ A+ Sbjct: 379 GSKDETK-ALEKADMALKY-AKQS--KKNFVCYD---ETLKIQEIYQNNISWVRNLKKAI 431 Query: 500 DQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 D+ L+Y QPI N + E Y E L R+K D + +P FL + + ++ L + Sbjct: 432 DEDGFLVYYQPILNNQTNKIEKY-ESLVRVKIDNTVYSPFYFLEIAKK----SKLYLAIT 486 Query: 557 ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + K H D S+NL L +L + I+ II+ K S + EI E + Sbjct: 487 KKVFKEAIKHAKD---YEISINLSVLDILNEEISTEIIKTLKE---SDLKITFEILESEG 540 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N E I+ + FG ++AIDDFG+GY+N+ + +L D IKID +K+I + Sbjct: 541 IENYEDVSGFIKNVKSFGAKVAIDDFGSGYSNFAYILKLDVDYIKIDASLIKNIHQDINS 600 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +IV +I +LAK + +AEFV ++ + +LG+ Y QGY I P+ Sbjct: 601 QIIVENIVNLAKKLGIKTIAEFVHCKEVFEKVKELGIDYSQGYYISEPKD 650 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 20/260 (7%) Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGE--GYDEILARLKYDGGIMTP 535 E ++ Q + + + +R AL G+L LY QP + G G + +L GIMTP Sbjct: 547 EELAVQVSDRTAMEGALRKALGNGELELYYQPQVALPAGRIVGAEALLRWRHPQEGIMTP 606 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--------KGP-RFSVNLMPLTLLQ 586 D+F+P+ + L + L W+ T C + P + +VNL ++ Sbjct: 607 DRFIPIAEETGL--------IRDLGHWVLTTACRRAVYWHRTVDSPFKVAVNLSTRQFVR 658 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++ G + R+ + P+ + LEITE N +E+LH GF I+IDDFGTGY Sbjct: 659 NDLPGELQRIVQDTGCRPEWLELEITESLLLGNDAEVGAALEELHDMGFAISIDDFGTGY 718 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 + L R D IKID F++ + +V++I +A A L V+AE VET Q Sbjct: 719 SALSYLNRFPLDQIKIDRSFIQGFPADREKVELVKAIISIAGALQLEVIAEGVETSHQAE 778 Query: 707 LLHKLGVQYLQGYLIGRPQP 726 LH G + QG+L GRP P Sbjct: 779 YLHAQGCRLAQGHLFGRPLP 798 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 124/453 (27%), Positives = 204/453 (45%), Gaps = 34/453 (7%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN--------FRALEQAPEQEAG 349 L+SF VC + SE RR H A D LT LPN AL+QA Sbjct: 954 LVSF-VCFFSDISERKASE---RRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQW 1009 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL-SGP 408 L +D + ++ G ++ + L + +++ + ++ G E L+L S Sbjct: 1010 VVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQG 1069 Query: 409 ETEGRLQHMVN----ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG-QLSWLAE 463 + E L+ + IL + G + A+ G L P G +LS L + Sbjct: 1070 DREIALKRAIQVAELILGRLARPFTLEGREFFVTASIG------VALSPQDGAELSLLMK 1123 Query: 464 QS-CAHHHVLALDSR-----EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE 517 + A +H + + ++ + +++ L + +R AL+ G+ +L+ QP +G Sbjct: 1124 NADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGR 1183 Query: 518 ---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGP 573 G + +L G++ P +F+P++ + L A+ +L K L + H + P Sbjct: 1184 RLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVP 1243 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 + SVNL + RI + I P + LE+TE S+ +M + L + Sbjct: 1244 KVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRL 1303 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G IA+DDFGTGY++ LK+ D++KID FV + DA I R+I +A + +L Sbjct: 1304 GLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLM 1363 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V+AE VE+Q Q L + G +QGYL GRP P Sbjct: 1364 VIAEGVESQAQLDFLREHGCDEVQGYLFGRPMP 1396 >UniRef50_Q1N196 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N196_9GAMM Length = 913 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 119/438 (27%), Positives = 201/438 (45%), Gaps = 44/438 (10%) Query: 320 RRWHLQALT-----DPLTLLPNFRALEQAPEQ--EAGKSFCCLRIDNLEF---------- 362 R H++ L D LT LPN AL + ++ E K F L++ L F Sbjct: 479 NRTHIERLEYKTRHDDLTGLPNRNALSELLDEKIELAKQFG-LKVGLLFFDLDRFKEVND 537 Query: 363 -MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 + +YG ++ + I L P+ N KL +L G E +V+ E ++ + + Sbjct: 538 ALGHNYGDVLLKKIPQRINNYLQPI---NAKLCRLGGDEFAIVIPTIENTAQVLELAKDI 594 Query: 422 NSR--------QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC--AHHHV 471 + Q+H + G + +G+ +G L A+ + A H Sbjct: 595 QTALRQAFDLGQLH---VEVSASLGVSCYPENGSD------VGTLMRCADVAMYKAKHTP 645 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-KEGE-GYDEILARLKY- 528 + S + + +++ ++ I + L Q L+ QP + K G E L R ++ Sbjct: 646 GGILSYSANLDEGSPRRLAIMAAINSGLKQDQFFLHYQPKMDLKTGHVTAAEALIRWQHP 705 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 + G+++P +F+PL ++ VL+ + L +K R SVN+ LL N Sbjct: 706 EMGLISPGEFIPLAEMSDIIIDLTEWVLDQAIYQLKKFQLSQKDVRLSVNVSTRNLLDDN 765 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + Y + PQ + LEITE + + ++ + +L G I++DDFGTGY++ Sbjct: 766 LVPYIHAKLEEYDVRPQQLELEITESALMVDPDRALETLNKLSGLGLSISVDDFGTGYSS 825 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+RL D +KID +FV+++ N DA+IV SI +L SL+VVAE E + +L Sbjct: 826 LVYLRRLPIDSLKIDLMFVRNMCRNDQDAIIVNSIINLGHNLSLTVVAEGAEDKATVEVL 885 Query: 709 HKLGVQYLQGYLIGRPQP 726 +G Y+QGY I +P P Sbjct: 886 KTMGCDYVQGYQISKPVP 903 >UniRef50_B4RSB4 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RSB4_ALTMD Length = 950 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 14/265 (5%) Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN----KEGEG----YDEILARL 526 ++ +M + QVL + + AL LY+Q I +E +G + EIL RL Sbjct: 677 ENDSQMAIDDSENQVL--HALHKALQHDGFELYSQAIMPLTVPQEEQGAHLQHYEILLRL 734 Query: 527 K-YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLT 583 + G+++P F+PL + L + DL V+++ LK L ++P D G + ++NL +T Sbjct: 735 NSKESGLISPGLFIPLAERHGLMNKVDLWVVDNTLKTLESNPAHIDNVG-KVAINLSGIT 793 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L + +I + + + + + EITE A +N ++ + I L G A+DDFG Sbjct: 794 LGDEMALHKIAQRMQSTTVPAEKICFEITETTAVTNLNAAKHFISTLRDIGCSFALDDFG 853 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 G +++ LK L D +KIDG FV++IV + +D V +I ++A + VAEFV Sbjct: 854 AGMSSFTYLKNLDVDYVKIDGSFVRNIVHDPIDHATVTAINNIAHSMGKQTVAEFVVDNA 913 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 +L KL V Y QG+ + +P+PLA Sbjct: 914 TAEVLRKLKVDYGQGFALDKPKPLA 938 >UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QP03_9BACI Length = 802 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 110/440 (25%), Positives = 194/440 (44%), Gaps = 32/440 (7%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----EAGKSFCCLRIDNLEFM 363 ++R + ++ A DP+T+LPN L + + + + + ++ +F+ Sbjct: 357 IIRDLSEQKSKEKKIEFMAQYDPITVLPNRNYLREKLNELLLRDVSIAVLLVDVNRFQFI 416 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR---LQHMVNI 420 + G ++ + R L + E L ++ E +V + + E L+ + + Sbjct: 417 NDFLGHSNGDELLKEVARRLKKIQSEQVFLSRIGDDEFAVVYTYNKKEEVNWLLKKLDRL 476 Query: 421 LNSRQ-IHWNNTGLDMGYGAAWGR-FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 LN I + + G ++ D + ETL G+ + A+ + H V Sbjct: 477 LNEPYFIAGEKLNVTINIGVSYAHDADRSVETLLSNAGKAVYYAKTNGVHRVVQYQSKLH 536 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-KEGEGYDEILARLKYDG-GIMTPD 536 ++ K++ L N ++TAL+ + LY QP N + G E L R K+ G+++P Sbjct: 537 DIF----VKRIRLENDLQTALENNEFSLYYQPKVNVQSGTVSVEALIRWKHPQLGMVSPA 592 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCD------KKG---PRFSVNLMPLTLLQK 587 +F+P+ + N+ +E + KW+ CD K G + +VNL + Sbjct: 593 EFIPIAEETNM--------IERIGKWVLQQSCDDLKTLHKSGFSALKMAVNLSARQFMDS 644 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + + + P + + EITE + ++ L + G IAIDDFG Y+ Sbjct: 645 SLKATVSNILTSADVPPSSFVFEITETTIMKEPNEVIRILQALKEQGIMIAIDDFGVSYS 704 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L R D +KID F++D N A IV +I LA +LSV AE VET++Q Sbjct: 705 SLNYLNRFPIDAVKIDRSFIRDFHENRKGAEIVEAIISLAHRLNLSVTAEGVETEEQVRF 764 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 L + G +QGY RP PL Sbjct: 765 LLEKGCDEMQGYYFSRPVPL 784 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 119/458 (25%), Positives = 214/458 (46%), Gaps = 35/458 (7%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL-----EQAPEQEA 348 I+ V ++ V + +VR + H A DPLTLLPN R L E Sbjct: 640 IVEVQMAGEVNFIGVVRDITERKQRENEIHQLAFYDPLTLLPNRRLLLDRLTEAINHSVR 699 Query: 349 GKSFCCL---RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV- 404 ++F L +DN + ++ G + + L+ +++ + + +L G E +++ Sbjct: 700 TRNFSALFFLDLDNFKNLNDSAGHNKGDLLLGQVAERLVNSVRQGDTVARLGGDEFVIIA 759 Query: 405 --------LSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETL--QPL 454 L+ + E Q +V+ L +N GL A+ G N E L + L Sbjct: 760 SDLSHEPTLAANQAERLAQKIVSNLTR---EYNLDGLTYNSSASIGVTLFNSENLPKEDL 816 Query: 455 LGQ--LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L Q ++ + + V D + ++ + + +++ + +A+ +L+ Q Sbjct: 817 LKQADMAMYKAKYAGRNGVQFFDPQMQV---SVSSRASIVSDLYSAIQSQQFVLFYQKQV 873 Query: 513 N--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE----SLLKWLATH 566 N K+ G + +L + + G+++P +F+PL + L VLE +L KW + Sbjct: 874 NHLKQCIGVEVLLRWIHPEKGMVSPLQFIPLAEETGLIVPIGEWVLEEACATLAKW--SL 931 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 +K+ +VN+ + + N ++ K +PQ + LEITE +N Sbjct: 932 ESEKQHLSIAVNISVVQFSKDNFVQTVLNALKTSGANPQLLKLEITETLLANNIPDVKAK 991 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 +++L + G +IDDFGTGY++ LK+L + +KID FV+DI+ ++ D I +++ L Sbjct: 992 MKELQQHGVTFSIDDFGTGYSSLSYLKQLPINQLKIDQGFVRDIINSSNDRAIAQAVITL 1051 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 A + L V+AE VET+ Q+ALL +G QGYL G+P Sbjct: 1052 ADSIELQVIAEGVETEAQRALLQSMGCHTYQGYLYGKP 1089 >UniRef50_Q6F6T4 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F6T4_ACIAD Length = 676 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 112/423 (26%), Positives = 201/423 (47%), Gaps = 23/423 (5%) Query: 326 ALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 AL D LT LPN R +E + E + + + +DN + ++ G + ++ Sbjct: 253 ALYDELTGLPNRRYVKDRLKKVIELSKESQHHSAILMMDLDNFKTVNDTLGHDYGDNLLK 312 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV------NILNSRQIHWNNT 431 + + ++E E + +L G ELL++LS + I NS +N Sbjct: 313 MVANRVKKCVRETETIARLGGDELLIILSNLSENEEIAQAQAQAIAERISNSIYQPFNLE 372 Query: 432 GLDMGYGAAWGRFDGNQETL-QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + + G F N ++ Q L + + +A + + + + ++ + Sbjct: 373 NQVIQTSVSIGIFVFNDASIPQNELLKYADMALYQAKANGKNCICTFDPLMEQNVISRAS 432 Query: 491 LLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNL- 547 LL+ +R AL + + LY QPI ++ + GY+ +L + G++ P +F+ + +L Sbjct: 433 LLSDLRQALIRDEFELYYQPIVDQHKKIIGYEALLRWIHPVRGLILPGEFIEQAEKSDLI 492 Query: 548 ---SARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 R + + L +W + D SVN+ + + II++ + +P Sbjct: 493 HLIGNRVLMMACQQLYQW--SQNTDSAHWTLSVNISVQQFRKSDFEENIIQIIQDSKANP 550 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE +++ +SS+ +++L + G R ++DDFGTGY++ LK L D +KID Sbjct: 551 YRLRLELTESMFYTDMQSSIEKMKKLIEIGVRFSMDDFGTGYSSLNYLKLLPLDQLKIDR 610 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FVK++V N+ D IV +I +LA L+VVAE VET++Q L + QGYL GRP Sbjct: 611 SFVKNMVDNSRDIAIVNTIINLAHILDLNVVAEGVETEEQFICLTQNQCFTFQGYLFGRP 670 Query: 725 QPL 727 P+ Sbjct: 671 LPI 673 >UniRef50_Q7NZT0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZT0_CHRVO Length = 606 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 102/401 (25%), Positives = 188/401 (46%), Gaps = 36/401 (8%) Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV--- 404 AG + + +DN + ++ +G + I++I LL ++ + + + G E +++ Sbjct: 190 AGLALLFVDLDNFKLINDTHGHGIGDQLIQAIAARLLTQLRPGDTVARFAGDEFVVLCEQ 249 Query: 405 LSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ++ PE L +N ++ + GL +G A+ G G+ Q L L A+ Sbjct: 250 VARPEDISALAERINAALREEVRLD--GLALGCTASIGIAIGSGR--QHLADDLLRSADI 305 Query: 465 SCAHHHVLALDSRE------EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG 518 + H + R+ + + GQ ++ ++ +R+A+++ +L QPI + +G Sbjct: 306 AM---HAVKQKGRDGWRFFNDSLHGQARQRFSIIQGLRSAIEREELHARYQPIVDADGVR 362 Query: 519 Y--DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-------- 568 E+L R GG + P +F+ + + ++ W+ C Sbjct: 363 VVGAELLLRWHAAGGEIPPAQFITIAESCG--------AIVAIGYWVFRQACLAEADWRR 414 Query: 569 --DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 P SVNL L + +A R+ + +P ++LE+TE ++ + ++ Sbjct: 415 RWGADAPYVSVNLSARQLDEARLADEFGRILRETGAAPARILLEVTETALMADIDVNLKV 474 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 ++ L+ G R+A+DDFGTGY++ +L RL +++KID FV I D ++R+I L Sbjct: 475 LQALNALGLRVAVDDFGTGYSSLAQLTRLPVEVLKIDRAFVDGIGRKQQDVTLIRAIIGL 534 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 KA L +VAE VE+ +Q L +LG +QGYL RP PL Sbjct: 535 GKALGLKLVAEGVESGEQLQTLRQLGCDLIQGYLFHRPMPL 575 >UniRef50_A8EV16 EAL/PAS/GGDEF domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EV16_ARCB4 Length = 615 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 110/426 (25%), Positives = 199/426 (46%), Gaps = 39/426 (9%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRV 373 ++E L R L D LT + N L + + L I + ++ +G Sbjct: 197 KTEELKRNLRL----DSLTNIGNRYKLIEDVSKSVNPCISILDIVSFSDVNDFFGYKTGD 252 Query: 374 HCIRSICRTLLPLM--QENEKLYQLPGSELLLVLSGPETEGRLQHMVNI----------L 421 + ++ + R + L+ +EN K+Y+ +V + + ++++ I + Sbjct: 253 NVLKIVARKIEELLIDKENYKVYRDHSDTFCIVAQNEDRDKFIKNIDEISKTIAKVPIVI 312 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 SR+++ + + Y ++ E+ + LL + + S A+ +++ D E+ Sbjct: 313 KSRELY-----VQLSYVFSF-------ESKENLLETANIIKRYSHANKNIIIYDKALEL- 359 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 K + I+ ALD+ ++ Y QPI N + E Y E L RL +++P F Sbjct: 360 EKDYEKNIFWTLKIKKALDEDKIVPYFQPIYNLKTSKIEKY-EALVRLIDGNNVISPYYF 418 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 L + + S ++ LQ+ +++++ + DK FS+NL + + I+ II L K Sbjct: 419 LDISKK---SKQY-LQLTKTMIQKTFDYFRDK-DFEFSINLTFEDIKSEYISSFIIELLK 473 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 Y I + V+ EI E + N + ++G +IAIDDFG+GY+N+E L +L D Sbjct: 474 EYKIGHR-VVFEIVESEEIDNFRKINEFFVTIREYGCKIAIDDFGSGYSNFEYLAKLNVD 532 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 IKIDG +KDI+ N IV + + AK + + +AEFV + + +LG+ Y+QG Sbjct: 533 YIKIDGSLIKDILINKSSQNIVSMLVNFAKGQKVKTIAEFVSNKDILNKVRELGIDYVQG 592 Query: 719 YLIGRP 724 Y I P Sbjct: 593 YYIKEP 598 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 122/428 (28%), Positives = 205/428 (47%), Gaps = 32/428 (7%) Query: 325 QALTDPLTLLPNFRALEQAPEQ---EAGK-----SFCCLRIDNLEFMSRHYGLMMRVHCI 376 QA D LT L N L++ +Q EA + S + IDN + ++ G I Sbjct: 388 QANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFKRVNDSMGHSAGDELI 447 Query: 377 RSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN-----ILNSRQIHWNNT 431 R + + L +++ + + +L G E +L+L+ + + +V I+N I Sbjct: 448 RLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVVQRIRNTIINPFIITGRQL 507 Query: 432 GLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + G A DG N +TL L S + + + + ++E ++ + ++ Sbjct: 508 TVTCSIGLANFPHDGRNADTL--LSNADSAMYQAKASGSNNFRFYAKE--MNAELGHRLS 563 Query: 491 LLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L N + AL+ L+L+ QP +RN + G + ++ G++ P +F+PL L Sbjct: 564 LENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSEDDGL 623 Query: 548 SARFDLQVLESLLKW-----LATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + V+E+ LA +P P R +VNL L QK++ I + + Sbjct: 624 IVPIGIWVMETAAHQNRQLQLAGYP-----PIRVAVNLSVRQLEQKDLVHCIEKTLQHSG 678 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + PQ + LEITE N E S+ + ++ G ++++DDFGTGY++ LKRL + +K Sbjct: 679 LDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLK 738 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ DI T DA+I RSI LA + + V+AE VE+ Q A L + G +QGYL+ Sbjct: 739 IDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLL 798 Query: 722 GRPQPLAD 729 RP+P + Sbjct: 799 SRPRPFEE 806 >UniRef50_A6Q7Q8 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q7Q8_SULNB Length = 656 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 108/423 (25%), Positives = 202/423 (47%), Gaps = 24/423 (5%) Query: 326 ALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN +++++ + L +DN + ++ G + + ++ Sbjct: 229 AYYDILTKLPNRVLFYDRLKHSIDKSKRNNTKLAVLFLDLDNFKEINDSLGHHVGDNVLK 288 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL----QHMVNILNSR-QIHWNNTG 432 + L +++++ L +L G E L+L E + Q ++ +++ +I + Sbjct: 289 ILATRLQKRLRKSDTLARLGGDEFTLLLEDLEDLSNIGEISQSLIQVISKPIKIKEHTLY 348 Query: 433 LDMGYGAAWGRFDG-NQETLQPLLGQLSWLAE-QSCAHHHVLALDSREEMVSGQTTKQVL 490 + + G + DG + E+L + A+ + C H ++EM + + +++ Sbjct: 349 VTVSLGISIYPDDGQDTESLLKCADAAMYSAKNEGCNLFHFY----KQEM-TVKALERIT 403 Query: 491 LLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 +IR ALD + ++Y QP IR + G + +L + G+++PDKF+ + ++ Sbjct: 404 FETSIRHALDNDEFIVYYQPLIDIRTNQLIGLEALLRWQHSEKGLLSPDKFIHIAETSSI 463 Query: 548 SARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 + +VLE + L H R +VNL L + I + ++ P+ Sbjct: 464 IIQIGERVLEDVAAQLEIWHEKGFNPERIAVNLSVKQLRHHGLISIISDILEKTKFRPKW 523 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE ++ + Q+ G + IDDFGTGY++ LK++ + +KID F Sbjct: 524 LELEITESYTMQKPVQAIRLLNQIKDLGVDLTIDDFGTGYSSLSYLKKIPVNKLKIDRAF 583 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 +KDI N D +V +I +AK+ +L VVAE VET++Q+ L LG +QGYL +P Sbjct: 584 IKDITENKDDKALVSAILSMAKSMNLDVVAEGVETEEQRQCLEALGCYKIQGYLFSKPMS 643 Query: 727 LAD 729 ++D Sbjct: 644 VSD 646 >UniRef50_A5PAA5 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAA5_9SPHN Length = 783 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 80/235 (34%), Positives = 119/235 (50%), Gaps = 6/235 (2%) Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL +G + ++ Q I + E G + +L GI+ P FL + + + Sbjct: 506 LREALTRGQMRMHYQAIVDLDTGETTGLEALLRWYHPQRGIIPPGDFLTIAEETGMITSL 565 Query: 552 DLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+ L A P + R ++NL P + N+ + + +I+P+ V LEI Sbjct: 566 GEWVIRQTLSDAAALPGNF---RIAINLSPTQVKNPNLVATVAQAIHATNIAPERVELEI 622 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE + + +L + G RIA+DDFGTGY++ L+R D IKID FV D+ Sbjct: 623 TEHVLMDQGAAGHVTLLRLRELGIRIALDDFGTGYSSLGYLRRFPFDRIKIDRTFVTDVA 682 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 ++ IV +IT LA A + AE +E Q+Q LL KLGVQ QG+LIGRP P Sbjct: 683 SDLGSQAIVSTITRLADALGMDTTAEGIEDQRQLDLLRKLGVQEAQGFLIGRPVP 737 >UniRef50_Q47W00 GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W00_COLP3 Length = 672 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 102/418 (24%), Positives = 193/418 (46%), Gaps = 17/418 (4%) Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 LNR + L+D + L + + + + + + I +F++ YGL + + Sbjct: 252 LNREQVMAKLSDKMQELTHANKINK---NQMKLAVFLIDIKQFKFINDTYGLKVGDFILG 308 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETE--GRLQHMVNILNSRQIHWNNTGLDM 435 I L + + + +L G + V+ + R + ++ L R + + + Sbjct: 309 EIASRLNHSVFIPQAVGRLSGDSFMFVIEFEQISHVDRAVNHIHELIERCFRYEQQEITI 368 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + + + + LL Q S LA +++ ++ + EE + Q VL+ + Sbjct: 369 QGSVGYCFYPDDADKSEDLL-QKSNLALHHAETNNIPSV-AFEEGMQAQGRHLVLMEKQL 426 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R+A+ + +LY QP N + EG + ++ + G+++P FL + + FD Sbjct: 427 RSAIANDEFVLYYQPQLNLFTNKLEGVEALVRWQHPEKGLLSPGDFLTELETLGMHNEFD 486 Query: 553 LQVL----ESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 +L ++ +W + ++ +VN+ + + + I L +Y I + + Sbjct: 487 NYILVKACQASERWFKLY---QRRVAIAVNITAVEFQNEQLVTNIQMLLHKYGIPSKYIE 543 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 LEITE ++ +M +I +L G +++IDDFGTGY++ L+ L D IKID F+ Sbjct: 544 LEITENVVMTDITRAMDSIVKLQSMGIKVSIDDFGTGYSSLAYLRDLPIDKIKIDRSFIN 603 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 ++ N D IV+S+ DL+ V+AE VET +Q LL LG +QGY I +P P Sbjct: 604 EVAINDSDLTIVKSMVDLSHGLGKRVLAEGVETIEQLNLLRHLGCDAVQGYFISKPLP 661 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 120/455 (26%), Positives = 211/455 (46%), Gaps = 34/455 (7%) Query: 297 VLISFSVCLLYMVRIYHRSEWL-NRRWHLQALTDPLTLLPNFR--------ALEQAPEQE 347 V+I V L + I + E L N ++ DPLT LPN AL Q+ Sbjct: 401 VIIGTVVALKDITEIKKKDEILYNMEYY-----DPLTGLPNRSLFSDRLKMALAQSKRNN 455 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +DN + ++ G + ++ + + ++E + + ++ G E +++ Sbjct: 456 EMCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQ 515 Query: 408 -PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGR--FDGNQETLQPLLGQLS---WL 461 + + IL Q W G + A+ G + E Q + + Sbjct: 516 IKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYR 575 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP-IRNKEGE--G 518 A++ +++ L +S + V +++ + N++R A+++ + +L+ QP I K G+ G Sbjct: 576 AKELGRNNYQLYTESMNQKV----LQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVG 631 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL----KWLATHPCDKKGPR 574 ++ +L D G+M P +F+P+ L VLE+ KW+ C + Sbjct: 632 FEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIE---CGLEPHL 688 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVNL + NI I R+ ++P+ + LEITE A + ++ + QL K G Sbjct: 689 ISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKG 748 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 R+++DDFGTGY++ L++L D +KID FV+DI N+ + I +++ LA L+V Sbjct: 749 IRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTV 808 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET++Q L K QGYL +P P + Sbjct: 809 VAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEE 843 >UniRef50_A9L3T6 Diguanylate cyclase/phosphodiesterase n=12 Tax=Shewanella RepID=A9L3T6_SHEB9 Length = 739 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 4/223 (1%) Query: 510 PIRNKEGEGYDEILARL-KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-P 567 P+ +E + EIL R+ + +G I++P FLP ++NL+++ DL V+++LLKW H Sbjct: 496 PLNREESGLHLEILLRMVQANGTIVSPAIFLPAAERYNLASKVDLWVIDNLLKWGGCHLD 555 Query: 568 CDKKGPRFSVNLMPLTLLQKNIAGRI-IRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 ++ SVNL +L + +RL + + I EITE A S + + Sbjct: 556 IWQQLDLVSVNLSATSLGDFEFMNWLEMRLMAEPELVDKLCI-EITETAAVSQLDQATKL 614 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 ++ L ++A+DDFG G++++ LKRL D +K+DG FV +I ++ D IV+SI L Sbjct: 615 LDILRPLNCKLALDDFGAGFSSFAYLKRLNVDFVKVDGQFVVNICEDSADQAIVKSICQL 674 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + VVAEFVE+Q L LGV Y QGY I +P LA+ Sbjct: 675 GQDMGFDVVAEFVESQDIGRKLQTLGVDYAQGYAINKPIRLAE 717 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 102/395 (25%), Positives = 189/395 (47%), Gaps = 36/395 (9%) Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGR 413 L +D ++++ G ++ + L L++ + L ++ G E +++L + + Sbjct: 201 LDLDRFKYINDELGHYSGDILLQKVANRLKKLLRTKDTLARIGGDEFVVILPKLKDIQEA 260 Query: 414 LQHMVNILNSRQ----IHWNNTGLDMGYGAAWGRFDGNQ-ETLQPLLGQLSWLAEQSCAH 468 + I+ S Q +H + + G + DG+ E L + A++S + Sbjct: 261 VSIAEQIIESLQAPFLLHHKDIYISASIGISVYPNDGDDGEMLLRRADRAMQKAKESGRN 320 Query: 469 H---HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILAR 525 + LD + E+V+ L N +R A+++ +L + QPI N + + + + A Sbjct: 321 RFELYTAKLDYQSEVVT--------LENYLRKAIERNELFVCYQPIVNIKTKKIEALEAL 372 Query: 526 LKYDG---GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC------DKKGP--R 574 +++ G ++P +F+PL + L + + KWL C + P + Sbjct: 373 MRWKQPNIGFVSPAQFIPLAEETGL--------IVPMTKWLFEQACVHIKAIHQFAPHVK 424 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +N+ + Q + ++ + K++ + P+ LE+TE NAE S+ + QL + G Sbjct: 425 IGINISAVHFQQDDFVQQLSTIVKKHDVHPRFFKLELTESTIMPNAEESVQKLVQLKQCG 484 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 F++AIDDFGTG+++ L R DI+KID F++ + + DA IV +I +A LSV Sbjct: 485 FKLAIDDFGTGFSSLSYLHRFPIDILKIDQSFIRRLSLYSDDATIVSTIIMMAHHLHLSV 544 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET+QQ L+K QGY I +P P+ + Sbjct: 545 VAEGVETEQQYEFLNKQQCDMAQGYYIAKPMPIDE 579 >UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=B1J7P7_PSEPW Length = 699 Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 120/435 (27%), Positives = 195/435 (44%), Gaps = 46/435 (10%) Query: 323 HLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 H A D LT LPN +AL + + + + CL +DN + ++ G Sbjct: 273 HHMAHHDALTGLPNRTLFNERLKQALVRGHQNDKLTAALCLDLDNFKNINDSLGHAFGDK 332 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-------TEGRLQHMVNILNSRQIH 427 +R++ + L ++E + L +L G E +VL+G + T RL + + H Sbjct: 333 LLRALGKRLRRELREQDTLARLGGDEFAVVLTGLDGREAACNTAKRLIEAICPPFQIEGH 392 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLG---------QLSWLAEQSCAHHHVLALDSRE 478 G+ +G A D N++ Q LLG + + C H + LD Sbjct: 393 QFTVGVSIGIAIAP---DDNEQAEQ-LLGYADMALYEAKRNGRNRYECFH---VELDV-- 443 Query: 479 EMVSGQTTKQVLLLNT-IRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMT 534 +Q L+ T +RTAL G L L+ QPI +++ GY+ +L G++ Sbjct: 444 ------AARQRRLVETDLRTALHLGQLHLHYQPIVDQQTSSVTGYEALLRWEHPTRGMVM 497 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 P F+P+ + L + L + A+ ++ SVNL P+ N+ + Sbjct: 498 PMDFIPIAEETGLIHELGTRALNLACQEAASWDSEQT---VSVNLSPVQFKNANLVHTVA 554 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++PQ + LEITE N+E ++ + L G I++DDFGTGY++ L+ Sbjct: 555 LALADSGLAPQRLELEITESVLLGNSEENVRTLRALKDLGVSISLDDFGTGYSSLGYLRS 614 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D IKID FV D+ + IVR+IT+L+ + + AE VE+++Q L G Sbjct: 615 FPFDRIKIDKSFVHDMCDSREAMSIVRAITELSNSLMIKTTAEGVESEEQMQRLAAEGCS 674 Query: 715 YLQGYLIGRPQPLAD 729 + QGYL GRP P + Sbjct: 675 HFQGYLYGRPVPAGE 689 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobact... 884 0.0 UniRef50_A7MP46 Putative uncharacterized protein n=2 Tax=Bacteri... 596 e-168 UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Se... 582 e-164 UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobact... 570 e-161 UniRef50_D0ZFH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ed... 545 e-153 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 533 e-150 UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepI... 526 e-147 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 524 e-147 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 522 e-146 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 519 e-145 UniRef50_C1MAR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ci... 519 e-145 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 518 e-145 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 518 e-145 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 517 e-145 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 517 e-145 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 516 e-144 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 516 e-144 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 515 e-144 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 515 e-144 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 515 e-144 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 515 e-144 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 514 e-144 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 513 e-144 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 513 e-144 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 513 e-143 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 513 e-143 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 513 e-143 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 512 e-143 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 510 e-143 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 510 e-143 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-142 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-142 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 509 e-142 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 509 e-142 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 509 e-142 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 509 e-142 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 508 e-142 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 508 e-142 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 508 e-142 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 508 e-142 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_B9ZQM9 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-141 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-141 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-141 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-141 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 505 e-141 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 505 e-141 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 504 e-141 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-141 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 503 e-141 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-140 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 503 e-140 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 502 e-140 UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 501 e-140 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 501 e-140 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 500 e-140 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 500 e-140 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-139 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-139 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 499 e-139 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-139 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-139 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 499 e-139 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-139 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase,... 498 e-139 UniRef50_A3JAM8 Response regulator receiver modulated diguanylat... 498 e-139 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 497 e-139 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 497 e-139 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 497 e-139 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 497 e-139 UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 496 e-138 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 496 e-138 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 496 e-138 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Pho... 495 e-138 UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_C1DD31 Predicted signal transduction protein containing... 495 e-138 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_Q2BRD7 Two-component response regulator n=1 Tax=Neptuni... 494 e-138 UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiester... 494 e-138 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-138 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-138 UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-137 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-137 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 491 e-137 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 491 e-137 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 490 e-136 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-136 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-136 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 490 e-136 UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 490 e-136 UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudov... 488 e-136 UniRef50_C8T3N0 Putative uncharacterized protein n=1 Tax=Klebsie... 488 e-136 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 488 e-136 UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacte... 488 e-136 Sequences not found previously or not previously below threshold: UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 531 e-149 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 529 e-148 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 526 e-147 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 524 e-147 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 520 e-146 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 520 e-145 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 517 e-145 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 515 e-144 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 515 e-144 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 515 e-144 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 513 e-144 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 513 e-144 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 513 e-144 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 513 e-143 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 511 e-143 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 509 e-142 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 509 e-142 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 509 e-142 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 507 e-142 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-141 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 505 e-141 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 505 e-141 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 505 e-141 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 504 e-141 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 504 e-141 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 504 e-141 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 504 e-141 UniRef50_A8FYM5 Signal transduction protein containing a membran... 503 e-141 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-140 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 503 e-140 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 503 e-140 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-140 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 502 e-140 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 502 e-140 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 502 e-140 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 502 e-140 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 502 e-140 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 501 e-140 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 501 e-140 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 501 e-140 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 501 e-140 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 500 e-139 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 500 e-139 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-139 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-139 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 499 e-139 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 499 e-139 UniRef50_Q2SG37 Predicted signal transduction protein containing... 499 e-139 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 497 e-139 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 496 e-139 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-138 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-138 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 496 e-138 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 496 e-138 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 496 e-138 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-138 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 495 e-138 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 495 e-138 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 495 e-138 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 495 e-138 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 495 e-138 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 495 e-138 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 495 e-138 UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (... 494 e-138 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 494 e-138 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 494 e-138 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 494 e-138 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 494 e-138 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 493 e-138 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-138 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 493 e-137 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 493 e-137 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 493 e-137 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 492 e-137 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-137 UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-137 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 492 e-137 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 492 e-137 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 492 e-137 UniRef50_C1DB08 Predicted signal transduction protein containing... 491 e-137 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 491 e-137 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 491 e-137 UniRef50_Q2SF23 Predicted signal transduction protein containing... 491 e-137 UniRef50_Q220B0 Response regulator receiver modulated diguanylat... 491 e-137 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 491 e-137 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 490 e-137 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 490 e-137 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 490 e-137 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 490 e-136 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 490 e-136 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-136 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 490 e-136 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-136 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-136 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-136 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 489 e-136 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 489 e-136 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 489 e-136 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_Q2VYM7 Predicted signal transduction protein containing... 488 e-136 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 488 e-136 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 488 e-136 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 488 e-136 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_B8GSV3 Signal transduction protein containing a membran... 488 e-136 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 >UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobacteriaceae RepID=YFEA_ECOLI Length = 729 Score = 884 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 729/729 (100%), Positives = 729/729 (100%) Query: 1 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG Sbjct: 1 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY Sbjct: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN Sbjct: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA Sbjct: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS Sbjct: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL Sbjct: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI Sbjct: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM Sbjct: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP Sbjct: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY Sbjct: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII Sbjct: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL Sbjct: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 Query: 721 IGRPQPLAD 729 IGRPQPLAD Sbjct: 721 IGRPQPLAD 729 >UniRef50_A7MP46 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A7MP46_ENTS8 Length = 735 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 329/699 (47%), Positives = 471/699 (67%), Gaps = 2/699 (0%) Query: 32 SPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLG 91 SP AI+ + I+L ++PL +ML+++++FG + P++ W F L+ Q + Sbjct: 34 SPKAIVDGAGIYLTFLPLSLMLAMIYLFGRYALFPLVITFLFFYGWFFPLNSQQLLAFIA 93 Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 S V+ CAILR G RWR+ ++ RLF GL+ P IK M + G + D+P Sbjct: 94 SFLLPVILTCAILRALKGPRWRFAISRHSTGLRLFLPGLLAPCLIKFLMVVSGYWLDYPE 153 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 IS++FG++ + ++VV + L A +I+ +FYY RM +S FA+ W R + P L E Sbjct: 154 VISSYFGESTSFYSVVTVQGLMAASVIFVDIFYYPVRMALSRAFARAFWHRCVIPLLAPE 213 Query: 212 KRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVST 271 K+ W A + +LL+L P++ I+ Y +PV F++FT G+ + + L W+ S Sbjct: 214 KKVLAAGWFAGVFILLILFLLPFKLFLISIYTLPVIFVLFTAGIFLIGPVLITLLWSFSL 273 Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 L LL + NFL + + LAF+L+ I+F+V + +M I+++SEW+ R++ + ALTDPL Sbjct: 274 LLLLGSSSNFLPAEKNGFLLAFMLSGFIAFTVSMRFMTVIFNKSEWMKRQYRMLALTDPL 333 Query: 332 TLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 T LPN RALE+ + +G + CCLR+ NLEF+SRHYGLMMR+ C + + LLP + E Sbjct: 334 TRLPNLRALERHLQGISGGALCCLRVANLEFLSRHYGLMMRIQCKKEVTTLLLPWLNTGE 393 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD--GNQE 449 K++QLP S+LL+ L+GPE + RL+H+V++LNS++I WN L++ Y AAW E Sbjct: 394 KVFQLPDSDLLIYLAGPEPQSRLRHLVDLLNSKRIQWNGAQLELDYSAAWAPVPRAQTPE 453 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 L +GQLS+LAE + V+AL+SR + +SGQT++ VL+L ++ AL +G + L+AQ Sbjct: 454 ELYRTIGQLSYLAEVAGPGDPVVALESRSQGLSGQTSEPVLMLQKVKQALSEGGVTLFAQ 513 Query: 510 PIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 PI+N +GEGY EILARL+ DG ++ P KF+PLI +FNLSARFD+QVLE LL +L THP Sbjct: 514 PIQNAQGEGYAEILARLECDGELIMPAKFIPLITRFNLSARFDMQVLEKLLIYLHTHPQT 573 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + G RFSVNLMPLTL Q+ IA + I LF+RY + AVILE+TEEQA S +E+++ NI Sbjct: 574 RPGARFSVNLMPLTLEQQGIAQQAIALFERYRVPISAVILEVTEEQALSGSENTVQNISL 633 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L GF IAIDDFGTGYAN+ERLK LQADIIKIDG F++++V+NT DA++V+SI DLAKA Sbjct: 634 LQARGFCIAIDDFGTGYANFERLKNLQADIIKIDGCFIRNVVSNTFDALVVKSICDLAKA 693 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +SL+VVAEFVET Q+ LL LGV+Y+QG+L GRP+ L Sbjct: 694 RSLTVVAEFVETPAQRDLLFALGVEYIQGHLPGRPERLE 732 >UniRef50_A8GHP9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Serratia proteamaculans 568 RepID=A8GHP9_SERP5 Length = 750 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 214/722 (29%), Positives = 376/722 (52%), Gaps = 9/722 (1%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 + + ++LI + ++SP ++ ++L ++PL +++L ++ WR + + + Sbjct: 24 RWWGYPLIWGLLLIPFAGWLSPRIMLPEGKVYLLYLPLAACIALLMVYDWRALPGITLAI 83 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAI-LRWQLGTRWRYGL-TSRYVWQRLFWLG 129 L ++ +++ S + L C + R Q RW V RL WL Sbjct: 84 MVRYASRLGL---ESGILVTSLYLLCLILCWLGYRSQTQRRWCAAPGVPTLVKARLIWLV 140 Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 ++ + + L+ + P ++ G++D + +V+ +L L LFY++ R+ Sbjct: 141 VLPALLFVFGLKLLVALAQLPDELGMMPGNSDYLLALVNFQALLLGCLSAMPLFYFMLRL 200 Query: 190 IVSPHFAQILWRR---DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 + P FA LWRR ++AP K++ + L L ++ LL + GY + + Sbjct: 201 LNKPRFALTLWRRFGREMAPQADKKELSLWLLVLVSMVALLSYYAKNSNPLLLGGYGLIL 260 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + G + Y F + W+ S L L + + Q ++LA I ++++ F++C+ Sbjct: 261 LLPVMLYGAMRFGYQFNCIIWSSSLLVLFFHYPGYAQRDNLLHNLAVISSMMVVFTLCIY 320 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRH 366 M + R + R AL DP+ LPN RAL++ + C LR+ L+ +SR+ Sbjct: 321 LMSALNTRQRLSHARAQSAALQDPVIGLPNLRALKRDLTLSLPSTLCFLRVSELDLLSRN 380 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQI 426 YG+ +R+ + + L ++ E +Y LPG +LLL + G ++E ++ + + L ++ Sbjct: 381 YGMQLRIRFKQQLAALLHQVLAPGEGVYHLPGYDLLLRVDGEDSEEKVLQIYHALEKFRL 440 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 WN L G + + + E L LLG+LS LAE S ++ + + V + Sbjct: 441 IWNGLPLHPPLGLGYCSVNADFEHLYLLLGELSSLAEVSLTSGKPESVQNGGQWVQEEIK 500 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYD-GGIMTPDKFLPLIAQF 545 ++V LL+ ++ ALD +L AQPI G+ Y EIL R++ G I++P+ FLP+ +F Sbjct: 501 RKVELLHGVQHALDNDGFILMAQPIVGLRGDRYHEILLRMRDTCGEIISPNDFLPVAHEF 560 Query: 546 NLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 L+ R DL VL + LK++ + + RF+VNL P +L + + + L ++Y I P Sbjct: 561 GLAYRLDLWVLRNTLKFMDLYRAELPSARFAVNLSPSSLCRPMLRHDVNSLLEQYQIEPY 620 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE + + N++ L + G RIA+DDFGTGYA+Y+RLK L D++KIDG Sbjct: 621 QLTLEVTESHLLQDTAYAGANLQALREIGCRIALDDFGTGYASYDRLKMLPVDMLKIDGS 680 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+D++TN +D ++ SI +A+ K L++VAE+VE+ +Q L +GV Y+QGY IG PQ Sbjct: 681 FVRDMLTNPVDFQVITSICKVARMKRLAIVAEYVESMEQLVALKGVGVDYMQGYFIGEPQ 740 Query: 726 PL 727 PL Sbjct: 741 PL 742 >UniRef50_P77172 Inner membrane protein yfgF n=114 Tax=Enterobacteriaceae RepID=YFGF_ECOLI Length = 747 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 215/730 (29%), Positives = 373/730 (51%), Gaps = 19/730 (2%) Query: 12 KIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGM 71 K + L L +++ + I+ A I S +FL ++PL +M+S++ F W + + G+ Sbjct: 13 KWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGI 72 Query: 72 FCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT---SRYVWQRLFWL 128 F L F +T + + F+++ +++ T R ++ +R + QR+FW Sbjct: 73 FVRKYA--ELGFYETLSL--TANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFW- 127 Query: 129 GLVTPIGIKCSMYLVGSFFDFPLKISTFFGDAD-AIFTVVDLLSLFTAVLIYNMLFYYLT 187 +V P + ++ +F G + T+++ +L LI L Y++ Sbjct: 128 QIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFII 187 Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND---FIAGYLV 244 R++ +P + + + + K + WL AL LLLLLC P F Y + Sbjct: 188 RVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTL 247 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ---GVETEYSLAFILAVLISF 301 + + G + Y ++L WAV + ++ QN++ G T+ L + + F Sbjct: 248 SLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQ--LTITSSSYLVF 305 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLE 361 S + YM + R + RR A DP+ LPN RAL +A + C LRI +E Sbjct: 306 SFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGME 365 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 + ++YG+M+R+ + + L PL++ E +YQL G++L L L+ + R+ + + L Sbjct: 366 MLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHL 425 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM- 480 + W+ + G ++ + LLG+L+ +AE S + + R M Sbjct: 426 KQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMY 485 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLK-YDGGIMTPDKFL 539 + + +V ++N ++ AL+ L AQPI G+ Y EIL R+K + +++PD FL Sbjct: 486 LQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFL 545 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 P+ +F LS+ D+ V+E L+++A + RF++NL P ++ Q + +L + Sbjct: 546 PVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAK 605 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 Y I +I E+TE A +N + + ++ L + G +IAIDDFGTGYA+Y RLK + AD+ Sbjct: 606 YQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADL 665 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KIDG F+++IV+N+LD IV SI LA+ K + VVAE+VE ++ + + LG+ Y+QGY Sbjct: 666 LKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGY 725 Query: 720 LIGRPQPLAD 729 LIG+PQPL D Sbjct: 726 LIGKPQPLID 735 >UniRef50_D0ZFH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZFH2_EDWTE Length = 740 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 257/731 (35%), Positives = 409/731 (55%), Gaps = 9/731 (1%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR 62 V + + + + L +L+V+L+ L+ F SP A+++ +FL +P+ + +++ +FG R Sbjct: 11 VMQRVTRCLGQYALPASLSVLLLPLTWFFSPHAVVNGQALFLLPLPMALAAALVMLFGPR 70 Query: 63 GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLT---SR 119 + + + L LSF + + + + + LG R R L Sbjct: 71 ALPSLSLALLLFALLLPSLSFAGALALGCALLLPLSPIAHLSQRLLGKRGRCDLNRGGGT 130 Query: 120 YVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIY 179 + RL GL PIG M L G+ + D F ++ L + + + Sbjct: 131 RLAIRLLGFGLFYPIGSWLMMLLGGTLMTPLSIGTAAAPPRDLPFALLALEGMILSCVAL 190 Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 YYL RM+++P + D +L ++ R L A + LC P + Sbjct: 191 TPALYYLLRMLLNPGSLRAFL-LDCRRALRRDIRGLFLPIYVA---AMGALCFPPASHVN 246 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI 299 GYL P+ F++F RY + L WA++ L LL + NF+Q Y LAF+ + LI Sbjct: 247 LGYLTPLLFVLFVFASFHFRYRAVLLLWALTVLGLLACSANFIQLGNRHYQLAFLSSALI 306 Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALT--DPLTLLPNFRALEQAPEQEAGKSFCCLRI 357 +FS+ L+YM ++ R++ + R + L D L LPNFRAL + + C LR+ Sbjct: 307 AFSIALVYMAQVITRNDRMRRLYLRLRLRRRDGLVDLPNFRALNDYLARRPCGTLCILRL 366 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 NL+ +SR +G+ MR + L PL++ E++YQ+PG+ELL+ L R+ + Sbjct: 367 SNLDILSRCHGMTMRAATKSQLAAHLAPLLRPGERVYQMPGAELLIYLQADADLPRINAI 426 Query: 418 VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L ++ + W + + YG A+ FD +++++ ++GQLS+LAE++C + +L L Sbjct: 427 RATLIAQALVWQQHPVTLQYGVAYSPFDAHRQSIHAVVGQLSYLAERACRDNVILPLYGN 486 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDK 537 E + +QV L I AL + LLLYAQPI ++EG+ Y EILARL+ ++ P K Sbjct: 487 EADANAAVNEQVFWLQKITRALQENALLLYAQPIVHREGQRYYEILARLQDGEQLVLPGK 546 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 F+P I FNL A+FDL ++E++++ + D FSVNLMPLTL+Q +A +II LF Sbjct: 547 FIPFITAFNLCAQFDLLIIENVVRHIHRAGLDSSSTCFSVNLMPLTLMQNGVAAQIIALF 606 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 +RY + PQAVI EITE+Q + +++ + L + F+IAIDDFGTG +NY+RLK L A Sbjct: 607 ERYQVRPQAVIFEITEQQYLLDENAALETVRALRDYCFKIAIDDFGTGLSNYQRLKHLNA 666 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D++KIDG+FVKDIV+++LD +I++SI D+A+ + L VVAE+VE+++Q +L LGVQYLQ Sbjct: 667 DVVKIDGMFVKDIVSSSLDRLIIKSICDIARERQLQVVAEYVESREQMEILCSLGVQYLQ 726 Query: 718 GYLIGRPQPLA 728 G+L+G P+PLA Sbjct: 727 GFLLGEPRPLA 737 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 106/449 (23%), Positives = 200/449 (44%), Gaps = 21/449 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKS 351 + ++ + + + A DPLT LPN R L +Q + Sbjct: 434 GMVTNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGA 493 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---- 407 + +DN + ++ YG M ++ + + L+ +++ + + + G E +++L G Sbjct: 494 VLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDEN 553 Query: 408 -PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + + + + + F+ Q+++ L+ Q Sbjct: 554 PLDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMY 613 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDE 521 Q+ + L + + K+ L +R A++ L+ Q ++ G + Sbjct: 614 QAKKEGRNV-LRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVDESRHPFGAEA 672 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNL 579 ++ + G+++PD+F+PL + +L VLE+ + D K G SVN+ Sbjct: 673 LIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNV 732 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q + ++ L ++Y I+P + LE+TE N E ++ + L + G + ++ Sbjct: 733 SAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSL 792 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ + LKRL D +KID FV+DI + D IVR+I +A + L V+AE V Sbjct: 793 DDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGV 852 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET++QQ L G + QGYL G+P P+ Sbjct: 853 ETEEQQKHLSSKGCKNFQGYLFGKPVPIE 881 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 105/453 (23%), Positives = 190/453 (41%), Gaps = 16/453 (3%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQA 343 A + ++ + + + + + A D LT LPN AL QA Sbjct: 482 AQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQA 541 Query: 344 PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +D+ + ++ G + ++ I + L+++ + + ++ G E + Sbjct: 542 HRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTI 601 Query: 404 VLSG-PETEGRLQHMVNILNSRQIHW--NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L E I+++ W N + + + + LL Sbjct: 602 LLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADA 661 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGE 517 Q+ ++ QT ++ L N +R ALD+ + ++Y QP I + Sbjct: 662 AMYQAKEMGRN-NYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIV 720 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 G + ++ G+++P +F+P+ + L +L P R + Sbjct: 721 GVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVT 780 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL LQ ++ I + + + PQ + LEITE A + + + +L K G Sbjct: 781 VNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGIT 840 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ LKRL DI+KID F+ D+ T + D I+ +I L + VVA Sbjct: 841 LAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVA 900 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L + +QGYL +P P+ + Sbjct: 901 EGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRE 933 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 92/445 (20%), Positives = 185/445 (41%), Gaps = 24/445 (5%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE----------------AG 349 + ++ + A D LT L N ++ E E Sbjct: 420 IITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHK 479 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D ++++ G + ++ + L +++++ +++L G E ++L+ Sbjct: 480 WALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLT 539 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + +R + L + + + + ++ L+ + Sbjct: 540 DDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMYAAK 599 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILA 524 + E ++ +T ++++L N +R AL L++Y QP+ + + G + +L Sbjct: 600 EENQ--GYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVDSTNQIVGMEALLR 657 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLT 583 + G+++P +F+PL + L VL + +VNL Sbjct: 658 WHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQ 717 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + ++ I ++ + + P + LE+TE + E ++ ++ L G +IDDFG Sbjct: 718 FREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFG 777 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR D +KID FV D TN D I+++I +A+ + VAE VE ++ Sbjct: 778 TGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKE 837 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 QQ L G +QGY GRP P Sbjct: 838 QQDFLIHHGCHMMQGYYFGRPMPAE 862 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 102/443 (23%), Positives = 181/443 (40%), Gaps = 15/443 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKS 351 S V + R A D LT LPN ++ + + Sbjct: 544 SGRVEFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRGQLA 603 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 +D+ + ++ G + + R L +++ + + +L G E + +L + E Sbjct: 604 VMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVFLLPDTDAE 663 Query: 412 GRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 G + +L + + + ++ L + + + L Q+ Sbjct: 664 GAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREG 723 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 E + ++T+ +LL N +R ALD+G L+ QP + G + +L Sbjct: 724 RN-GFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWT 782 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLL 585 + G ++P +F+P+ L A+ VL + + P +VNL Sbjct: 783 HPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFR 842 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 N+ + ++ + + P V LE+TE A + +S++ ++ L G R++IDDFGTG Sbjct: 843 NPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTG 902 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR + +KID FV+DI + D IV +I LA + + VAE VET Q Sbjct: 903 YSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQL 962 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L + G +QGY RP P Sbjct: 963 DFLRQQGCDTVQGYYFSRPLPAE 985 >UniRef50_B2VE87 Inner membrane protein YfgF n=3 Tax=Erwinia RepID=B2VE87_ERWT9 Length = 749 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 221/706 (31%), Positives = 351/706 (49%), Gaps = 9/706 (1%) Query: 31 ISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVML 90 +S I Y++L ++P+ +M+++L +F WR + + L + Q V++ Sbjct: 32 LSVRLWISDGYVYLIYLPIAMMIAMLMVFDWRAFPGIAVALCFHYLG--RYTVPQVLVLV 89 Query: 91 GSQTFVVLCACAILRWQLGTRWRYGLTS-RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDF 149 G + R Q+ TRW V RL WL LV LV Sbjct: 90 GMFLASLAAGWWGYRTQIKTRWSVSPGELSQVSIRLIWLVLVISTLFVILTQLVLPIGIL 149 Query: 150 PLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL---WRRDIAP 206 PL S F D+ ++ +++ SL A L LFY+ R++ +P F +L +R I+ Sbjct: 150 PLHYSVFVDDSFSLRALLNYQSLLLASLGTVPLFYFSLRLLRNPRFIIMLKNRCQRQISA 209 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + + L L +L ++L L +N Y +P+ + + Y F +L+ Sbjct: 210 GVTWREFLLWLVLLMSLLIMLTLFRANQDNLLTTEYGLPLLLPLMLWAALRFGYLFTSLS 269 Query: 267 WAVSTLCLLNYNQNFLQ-GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 W + + L F+ V Y+L I A L+ F++ +L M I R L R Sbjct: 270 WGILLVVLYQLRDRFMDLTVMKPYNLLVISAYLLVFTLVILLMSAISTRQRQLLTRAKEL 329 Query: 326 ALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 ALTDP+ LPN RAL + + S C LRI +L+ +SR YGL +R+ RS+ L P Sbjct: 330 ALTDPIIGLPNLRALNKDLAFVSCSSLCFLRIPDLDRLSRTYGLRLRIQYKRSLAIYLRP 389 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD 445 + E +YQLPG +L++ L+ + R++ + + S + W+ + G ++ + Sbjct: 390 NLFAGESIYQLPGFDLVIRLNHAVLQSRIEELEARIKSYHLSWDGLPIHPDIGLSYCTVN 449 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALD-SREEMVSGQTTKQVLLLNTIRTALDQGDL 504 L LLG++S LAE S H + L S V T+++ +L+ I+ AL G Sbjct: 450 TPVLHLYELLGEMSALAETSLRSGHAVNLQQSTNVTVQRHITEKLAMLHDIQFALQNGSF 509 Query: 505 LLYAQPIRNKEGEGYDEILARL-KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 L +Q I G+ Y EIL R+ G + P F+P++ +F L+ D VLE L+++ Sbjct: 510 QLMSQKICGVRGDDYYEILLRMVNTQGEYIQPASFIPVVQEFGLTWEVDRMVLEQALRFI 569 Query: 564 ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 H G RF++NL TL + + I K + + P +I+E+ E S+ Sbjct: 570 HRHRDRLPGIRFAINLFAATLCRPQLTEEIASSLKTHGVEPWQLIIEVKESPMLSDNSWG 629 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 ++ QL K G R+AIDDFGTGYA+Y RLKR Q D++KIDG FV++++ N+LD I+ SI Sbjct: 630 NRSLAQLRKLGCRVAIDDFGTGYASYSRLKRAQVDMLKIDGSFVRNMLNNSLDYQIIVSI 689 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +++ K + +VAEFV+T++ L KLGV YLQG ++G P PL D Sbjct: 690 CAVSRLKRMQIVAEFVQTEEVAEELRKLGVDYLQGEIVGMPIPLQD 735 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 106/448 (23%), Positives = 188/448 (41%), Gaps = 26/448 (5%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 + + R + A D LT LPN L +Q ++ + + Sbjct: 375 HYIGTHNDITERKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFI 434 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-------- 407 +DN + ++ G + ++ + L +++ + + +L G E ++VL+ Sbjct: 435 DLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEA 494 Query: 408 -PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQ 464 +TE + ++ LN + T F G + L+ Q + Sbjct: 495 AQDTETVAEKILATLNQTYQLGHVTHHS-SASIGATLFKGPLIPIDDLMKQADLSMYKAK 553 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-GEGYDEIL 523 + + V D E+ + + + + AL + LL+ Q E G + +L Sbjct: 554 AAGRNAVRFFDPSMEIA---VKVRAEMEDDLLRALAEKQFLLHYQAQMVGERLTGAEVLL 610 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMP 581 G+++P +F+PL + L VLE+ LA + +VN+ Sbjct: 611 RWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSA 670 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q + +++ + ++ +PQ + LE+TE N E + + L G ++DD Sbjct: 671 HQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDD 730 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL D +KID FV+D++T++ DA I R+I LA + L V+AE VET Sbjct: 731 FGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVET 790 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + Q+ L G QGY RP P+ D Sbjct: 791 EAQRDFLASSGCHTYQGYYFSRPLPIED 818 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 102/440 (23%), Positives = 194/440 (44%), Gaps = 18/440 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLR 356 LL + R + H A D LT LPN R + QA ++ + L Sbjct: 262 LLLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLD 321 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL----VLSGPETEG 412 +D + ++ +G + + + L ++ + + +L G E + +L E Sbjct: 322 LDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATE 381 Query: 413 RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + ++ L R + ++ + + + + LL + A + Sbjct: 382 LAEQIMYQL-QRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRAD-TALYTVKSRGKN 439 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYD 529 D + + ++ +++L+ N +R A++Q +Y QP I G + ++ + + Sbjct: 440 GYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPE 499 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 GI+ P++F+P+ + + +L+ K + SVNL + QK++ Sbjct: 500 LGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDL 559 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I + + +SP + LEITE E + ++Q+ G +I+IDDFGTGY+++ Sbjct: 560 VEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGTGYSSF 618 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 +K L D IKID F++DI N IV++I +A++ +++V+AE +E Q A L Sbjct: 619 SYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALK 678 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G + QGYL +P P D Sbjct: 679 ENGCDHGQGYLFSKPLPTDD 698 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 109/433 (25%), Positives = 185/433 (42%), Gaps = 16/433 (3%) Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNL 360 V + QA D LT LPN L +Q + L +D Sbjct: 258 VEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQF 317 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH-MVN 419 +F++ G + ++ + L ++E++ + + G E +L+L+ E + H M Sbjct: 318 KFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPNEEAITHTMQR 377 Query: 420 ILNSRQIHW--NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 +L+ W N+ + + + LL ++ Sbjct: 378 VLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKELGRNNFQYFS 437 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 E ++ T ++ LLN +R A+ D +L+ QP + + G + ++ G+++ Sbjct: 438 AE-MNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVS 496 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRI 593 P F+PL + L VL + + P SVNL P L + +I + Sbjct: 497 PASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVV 556 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 R+ + Q + LEITE ++ E S + QL G +I++DDFGTGY++ LK Sbjct: 557 ERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLK 616 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D +KID FV+DI T+ A IV++I L + +L+V+AE +ET+ Q L G Sbjct: 617 RFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGC 676 Query: 714 QYLQGYLIGRPQP 726 QGYL+ +P P Sbjct: 677 DEGQGYLMSKPVP 689 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 98/447 (21%), Positives = 183/447 (40%), Gaps = 19/447 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE---------QAPEQEAGK 350 + ++ + QA DPLT LPN L+ +A + Sbjct: 434 GVVTNYIGVMNDITEHRRYEEQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPI 493 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG--- 407 L +DN + ++ G + ++++ L ++ + + +L G E ++VL Sbjct: 494 CVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVRE 553 Query: 408 -PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 P+ + M+N+ + + + + F + ET+ LL A Sbjct: 554 VPDVITVAKKMINVFAA-PLLLMGNEIYVTASIGIALFPTDGETVDALLKNAD-AAMYHA 611 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEIL 523 ++ + +++ L ++ A+ + LL+ QP +RN G + ++ Sbjct: 612 KEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALV 671 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPL 582 + G+++P KF+PL + L VL + R +VNL Sbjct: 672 RWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSAR 731 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q+N+ + + ++PQ + LE+TE AE S + +L G +AIDDF Sbjct: 732 QFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDF 791 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR +KID F++D+ + DA +V++I +A + +AE VE Sbjct: 792 GTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELA 851 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L + + +QGY RP + Sbjct: 852 EQIDFLCRHQCEEMQGYYFSRPITAEE 878 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 97/443 (21%), Positives = 184/443 (41%), Gaps = 18/443 (4%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCC 354 + + + + + +R A D LT L N AL Q+ + + Sbjct: 789 INFIGVKEDITQRKLNEKRLEYMATHDGLTGLANRTLLYDHLEIALHQSQRSKKLVAVIL 848 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G ++ ++++ + L ++ + + +L G E +++L+ Sbjct: 849 LDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLGGDEFVVLLTDVRDTTAA 908 Query: 415 QHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + L + + L + + + LL ++ A Sbjct: 909 GKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILLRNADIAMYKAKAEGCG 968 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 L S E ++ K + + N++R AL++ + LY QP G + +L Sbjct: 969 LYFYSHE--MNEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHATGRIIGCEALLRWRHP 1026 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQ- 586 G++ P +F+PL + L + VL + + P +VN+ Q Sbjct: 1027 QRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPPLTMAVNISARQFYQG 1086 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 +N+ + +R + P + LE+TE +A ++ + ++ + G +++DDFGTGY Sbjct: 1087 ENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGY 1146 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L+ D +KID F+ DI ++ A I+ SI +A L VAE VE Q A Sbjct: 1147 SSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLA 1206 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L+ G Y+QGYL RP P D Sbjct: 1207 LVANCGCNYIQGYLFSRPLPPED 1229 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 105/445 (23%), Positives = 193/445 (43%), Gaps = 20/445 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFC 353 + ++ M R + A DP+T LPN A+ +A G + Sbjct: 503 AEAIIGMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAIL 562 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G M +R + LL ++ ++ + +L G E ++++S + + Sbjct: 563 FLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHA 622 Query: 414 L-QHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC--AH 468 + ++ IL ++ + F + + LL Q+ Sbjct: 623 VGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGR 682 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILAR 525 + ++ + T+++LL +T+R AL++ + L QP R+ G + +L Sbjct: 683 NTCHFFSPE---LNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRW 739 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 D G++ P+ F+P+ + L VL + + + P R +VN+ Sbjct: 740 RHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQF 799 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q+N+ RI ++ + P + LE+TE N E ++ + QL K G ++IDDFGT Sbjct: 800 RQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGT 859 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK D +KID FVK + + DA I +I LA + L+VVAE +E +Q Sbjct: 860 GYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQ 919 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 +H+ +QGY + RP + Sbjct: 920 MEFMHQRHCDTMQGYYLSRPVTAEE 944 >UniRef50_C1MAR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Citrobacter RepID=C1MAR9_9ENTR Length = 736 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 211/745 (28%), Positives = 343/745 (46%), Gaps = 43/745 (5%) Query: 3 VEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWR 62 + N IKNI+ + L L + L+++++ +I++++ + + + L V + L +FG+R Sbjct: 5 INSNTIKNIREWCLPLVLPGLFYPLAQYLNGYSILNNTILTVYDLKLAVFSAALVLFGFR 64 Query: 63 GVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYV- 121 + L FL ++G Q V C I+ L T R Sbjct: 65 VLPGFLL-------------FLTVMFVVGPQNERVDALCLIIASTLSYAAYRKFTGRRSC 111 Query: 122 ---------WQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTV-----V 167 + RL WL G +YLV S D D I + V Sbjct: 112 VSFGRIKISFNRLLWL-----CGYNVLLYLVFSKLFAMFVAHGQRPDVDNIPALSLGMLV 166 Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + + L LFY + R+I P F R G +SW L L+ Sbjct: 167 RIQGIINGCLTGIPLFYKIYRIIRRPSFLLTFLRAIAEQCKGNIGVYGVISWCILLFFLM 226 Query: 228 LLLCTPYEND-FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG-V 285 L +P D F + Y + + F + G K+ + F L W + + L +N +++ V Sbjct: 227 FFLTSPDNLDVFFSIYSLILLFPLMLWGAIKIGHLFTMLVWTIVLIILGKHNDSYIASDV 286 Query: 286 ETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 A + ++ FS+ ++ M + + + L LTDP+T + N RAL+ Sbjct: 287 NFMLHQALVSTLIFVFSLTIVIMGVLAKFTRQRFNQALLLGLTDPMTGMANLRALKTELF 346 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + C ++I LE SR YG R + + L + ++EK+Y G +LL+ L Sbjct: 347 TTERATVCLIQIPELELFSRRYGFHFRARYQKILAEHLRRHLVKSEKVYYHAGYDLLIRL 406 Query: 406 SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E RL + NS ++ +NN L G + + + + L+G+L +A S Sbjct: 407 ENGTWE-RLCDLYQAANSFRLFYNNHRLGFRSGLGYCLINDLSDDIYQLVGKLGMVAGLS 465 Query: 466 CAHHHVLALDSREEMVSG-QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG-YDEIL 523 + L+++ + G + + ++ ALD +L AQPI + GE Y EIL Sbjct: 466 LTNGRPENLEAQHSRILGNHIVDKTEIRTALQNALDNNAFVLMAQPIVSTHGEAPYHEIL 525 Query: 524 ARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 R+ + G + P+ FLP+ L+ DL V+E+ LK++ HP FS+NL P+ Sbjct: 526 IRMLNERGEFIPPNSFLPVAHDAGLAPDIDLWVIENTLKFMRNHPQH----CFSINLAPV 581 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 T+ + NI +I +L Y + PQ +I EITE S+ E ++ + + + G R+AIDDF Sbjct: 582 TVCRSNIVMKITQLLHDYAVEPQRIIFEITEADTLSDKEQTVETLRLIRQLGCRVAIDDF 641 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTG+A++ RL ++ADI+KIDG F++ I + + IV S +A+ K + VVAEFVE Sbjct: 642 GTGFASHARLMNIEADILKIDGSFIRRITESEISYYIVESFCRVAEMKKMQVVAEFVENA 701 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 QA L K+ V +LQGY IG+P PL Sbjct: 702 TIQACLEKMNVGWLQGYHIGKPTPL 726 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 98/432 (22%), Positives = 185/432 (42%), Gaps = 21/432 (4%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEF 362 + + A D LT LPN LE+ + ++ + +D + Sbjct: 959 DITQHKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKN 1018 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + + L +++ + + +L G E ++VL + +G +L Sbjct: 1019 VNDSLGHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKLLE 1078 Query: 423 --SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL---LGQLSWLAEQSCAHHHVLALDSR 477 + L A + + E+ + L + A+QS + + Sbjct: 1079 VMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFF---- 1134 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 + ++ + + + N +R AL+ G+L L+ QP ++ G + +L G+++ Sbjct: 1135 TAEMQERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVS 1194 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRI 593 P +F+P+ + L VL + + L + P +VNL + Q ++ + Sbjct: 1195 PVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVV 1254 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 R+ ++ Q + LE+TE A N +++ +++L G R++IDDFGTGY++ LK Sbjct: 1255 SRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLK 1314 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R + +KID FV D+ + D IV + LA+ L +AE VE++ Q A L G Sbjct: 1315 RFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGC 1374 Query: 714 QYLQGYLIGRPQ 725 QGYL RP Sbjct: 1375 DEAQGYLFSRPL 1386 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 112/447 (25%), Positives = 185/447 (41%), Gaps = 23/447 (5%) Query: 300 SFSVCLLYMVRIYHRS------EWLNRRWHLQALTDPLTLLPNF--------RALEQAPE 345 F VC + I R R + A D LT LPN L +A Sbjct: 297 VFGVCTIG-TDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARR 355 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + L ID + ++ G +++I L +++ + + +L G E ++VL Sbjct: 356 SNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVL 415 Query: 406 SGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G + + N L SR + + + F + LL Sbjct: 416 EGIHDVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAM 475 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGY 519 ++ + ++ +LL N +R A++Q L LY QP + + G Sbjct: 476 YKAKEAGKNNC-QFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGV 534 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + ++ + G+++P F+PL + L VL K K + +VN Sbjct: 535 EALVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVN 594 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P QKN G++ + + + + + LEITE A +A ++ + QL++ G +A Sbjct: 595 LSPRQFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLA 654 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ L+R +KID F+ DI + DA I ++I LA L VVAE Sbjct: 655 IDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEG 714 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQ 725 VET+ Q L G +QG+L +P Sbjct: 715 VETESQAEWLRAKGCDQVQGFLYAKPM 741 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 108/455 (23%), Positives = 196/455 (43%), Gaps = 21/455 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------A 339 E+ L + + + R A DPLT LPN A Sbjct: 581 EWLLIQTMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLA 640 Query: 340 LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + A + + L +DN + ++ G + ++ + L+ ++E + + +L G Sbjct: 641 ISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGD 700 Query: 400 ELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL--- 454 E +LVL G +T+G +LN +RQ + +++ + + L Sbjct: 701 EFVLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRS 760 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 + A+QS + + + ++ + + + N +R AL++ L QP + Sbjct: 761 ADAAMYRAKQSGRNDYCFFTTE----MQARSARTLQIDNALRRALERNQFSLVYQPQLSL 816 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK- 570 G++ ++ G PD+F+P+ VL++ ++ L + Sbjct: 817 NTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGL 876 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 K SVNL + + ++ + + +SP+ + LE+TE A N +++ I++L Sbjct: 877 KDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDEL 936 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 K G RI+IDDFGTGY++ LKR +KID FV+D+ +T D IV ++ LA + Sbjct: 937 RKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSL 996 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + VAE VET++Q L G +QGY + RP Sbjct: 997 GMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPL 1031 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 99/442 (22%), Positives = 179/442 (40%), Gaps = 27/442 (6%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLE 361 R + A DPLT LPN R L Q + L +D+ + Sbjct: 447 RDITQQRQDEEEIRRLAFYDPLTGLPNRRLLMDRVRQAMVNSARLGQHGALMFLDLDHFK 506 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------PETEG 412 ++ G + ++ + L ++E + + +L G E +++L G + E Sbjct: 507 LLNDTLGHDVGDELLQQVAYRLRNCVREGDSVARLGGDEFVVLLEGLSDNRTDAANQAEV 566 Query: 413 RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCAHHH 470 +++ L + G + F + ET+ LL + ++ + Sbjct: 567 VAHKILDAL-ALPYSLRGHGYNSTPSIGIVVFMEDHETMDDLLKKADVAMYQAKAAGRNT 625 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKY 528 D ++ T L IR L + + +L+ Q + +G G + ++ Sbjct: 626 ARFFD---PVMQAAVTTHAELAKEIRLGLQRHEFVLHYQVQIDSQGRCTGAEALVRWNHR 682 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQ 586 G+++P F+PL + + V+ES + L + +VN+ L Q Sbjct: 683 VRGLVSPAHFIPLAEETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQ 742 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + +R + LE+TE + E + + + + G ++DDFGTGY Sbjct: 743 PEFVASVREALQRSGAPAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGY 802 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKRL +KID FV+D++T+ DA+I R++ L + L+V+AE VET +Q+ Sbjct: 803 SSLSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRD 862 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L + QGY GRP P Sbjct: 863 ALAAMQCDAFQGYYFGRPAPAD 884 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 114/474 (24%), Positives = 202/474 (42%), Gaps = 27/474 (5%) Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + ++ + + ++ + V L VR + A DPLT LPN R Sbjct: 654 HKRMDSGQSFPADVLLSSMKLDGRVVLQATVRDITERKKSESEIVRLAFYDPLTGLPNRR 713 Query: 339 ALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L + + + + +DN + ++ G + + + + L ++E Sbjct: 714 LLMDRLQHALTSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREE 773 Query: 391 EKLYQLPGSELLLVLS---------GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAW 441 + + +L G E +++L G T+ + ++ LN Sbjct: 774 DTVARLGGDEFVVLLDNLSHGHDNAGAHTKRVAEKILQALN-LSYMLQGYEYHSSPSIGV 832 Query: 442 GRFDGNQETLQPLLGQLS--WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + + LL + ++ + V D R + + + L + + AL Sbjct: 833 ALFCADASSPDELLKRADSAMYQSKAAGRNTVRFYDERTQAL---LLARAELEHALHHAL 889 Query: 500 DQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 +Q L+LY Q N + G + +L G+++P +F+PL + + VLE Sbjct: 890 EQQQLMLYYQVQVNADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLE 949 Query: 558 SLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 L D K +VN+ + + A ++ L ISP + LEITE Sbjct: 950 QACDQLKRWASDVFKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESM 1009 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + E+ + ++QL K G ++DDFGTGY++ +KRL D +KID FV+DI + Sbjct: 1010 LVHDVENIIATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEH 1069 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D IVR+I +A++ L+++AE +ET+QQ+ LL G QGYL +P PL+D Sbjct: 1070 DKAIVRTIIAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSD 1123 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 108/441 (24%), Positives = 186/441 (42%), Gaps = 16/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCL 355 + + R + R A D LT LPN L E+ + L Sbjct: 369 HYVGVFSDISRMKETEARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFL 428 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL----SGPETE 411 ID + ++ G + + I R L ++ + L +L G E +++L S + Sbjct: 429 DIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSANDVA 488 Query: 412 GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 Q ++++LN + + +G + + + L+ Q+ Sbjct: 489 DFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRN 548 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + ++ +++ L +R L++G+ +L+ QP+ E G + ++ Sbjct: 549 V-YRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHP 607 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 G++ P +F+PL + L VLES + + +VNL + Sbjct: 608 TEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGD 667 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + R + LEITE +A+ ++ + L G R++IDDFGTGY++ Sbjct: 668 LTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSS 727 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR D +KID FV+DI + D MIV ++ +A L V+AE VET +Q A L Sbjct: 728 LAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFL 787 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 LG + QGYL+GRPQ AD Sbjct: 788 RSLGCEAYQGYLVGRPQAAAD 808 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 111/451 (24%), Positives = 202/451 (44%), Gaps = 26/451 (5%) Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEA 348 V+I V L + I + E + DPLT LPN AL Q+ Sbjct: 401 VIIGTVVALKDITEIKKKDE----ILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNE 456 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +DN + ++ G + ++ + + ++E + + ++ G E +++ Sbjct: 457 MCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQI 516 Query: 409 ETEGRLQHMVN-ILNSRQIHW--NNTGLDMGYGAAWGRFDGNQETLQPLLGQLS---WLA 462 + + IL Q W + G + E Q + + A Sbjct: 517 KDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRA 576 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGY 519 ++ +++ L E ++ + +++ + N++R A+++ + +L+ QP I+ + G+ Sbjct: 577 KELGRNNYQL----YTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGF 632 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVN 578 + +L D G+M P +F+P+ L VLE+ + C + SVN Sbjct: 633 EALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVN 692 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L + NI I R+ ++P+ + LEITE A + ++ + QL K G R++ Sbjct: 693 LSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVS 752 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L++L D +KID FV+DI N+ + I +++ LA L+VVAE Sbjct: 753 LDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEG 812 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET++Q L K QGYL +P P + Sbjct: 813 VETKEQLLFLKKEKCDKAQGYLFSKPLPAEE 843 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 103/440 (23%), Positives = 190/440 (43%), Gaps = 15/440 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + ++ S + + D LT LPN L +Q G + Sbjct: 489 THFVAILNDVTESIQYQAQLEYKTKYDNLTGLPNRNLLNDRIQQAIAYAARRNKGFALAV 548 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 +DN ++++ G + + +L ++E + L +L G E ++++ E + L Sbjct: 549 FDLDNFKYINDSMGHETGDQLLTEVAESLRSCLREGDTLARLGGDEFVILMHKEECDRPL 608 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 M+N + S+ + + + +F + E LL ++ Sbjct: 609 GLMLNRIQQLVSQPRRLKDKEILVTPSIGVCQFPEDGEDASTLLKNADTAMYKAKERGRN 668 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYD--EILARLKYD 529 + S + ++ K+V + +R ++ G+L LY QP + G G E L R + Sbjct: 669 R-ICSYTQEMNESIQKRVQMEQDLRRGIENGELELYYQPQLDPHGGGAVGLEALVRWRKG 727 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKN 588 ++ P +F+P+ + L D VL + L ++ SVNL P Sbjct: 728 DRMVPPLEFIPIAEETGLITEVDAWVLRAACLQLKMWRDQKQQMVPVSVNLSPRQFQDAY 787 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++ + +I P + +E+TE NAE ++ + QL G ++++DDFGTGY++ Sbjct: 788 CVELVRKVLQESNIEPGCLKIEVTESMVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYSS 847 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK D +KID FV+++ + +A I+R+I L K + +VAE VET +Q + L Sbjct: 848 LSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSFL 907 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 + G +QGY P P+A Sbjct: 908 VRAGCDLIQGYFYSPPLPVA 927 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 109/460 (23%), Positives = 196/460 (42%), Gaps = 22/460 (4%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR-------- 338 TE+ + + + + R H A DPLT LPN Sbjct: 368 TEHLTITGIRGPDGTFTHYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGA 427 Query: 339 ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 AL +A Q + L +D +F++ G + ++++ L ++ ++ + +L G Sbjct: 428 ALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGG 487 Query: 399 SELLLVLSGP-ETEGRLQHMVNILNSRQ--IHWNNTGLDMGYGAAWGRFDGNQETLQPL- 454 E +VL + G Q +++ Q + + + + + + T + L Sbjct: 488 DEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLR 547 Query: 455 --LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 + A++ ++ ++ T ++ L + + AL + + L+ QP Sbjct: 548 MNADTAMYRAKERGKNN----FQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKV 603 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G + +L ++ G ++P F+P+ + NL + VLE + Sbjct: 604 DLAHGHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNL 663 Query: 570 KKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 P +VNL + Q +I + R+ + ++ + LEITE A N + ++ Sbjct: 664 GLLPGTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLK 723 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L G RIAIDDFGTGY++ LK+L D++KID FV D+ + DA I +I + + Sbjct: 724 NLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQ 783 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +L VAE VE ++ + L G QY QGYL RP P A Sbjct: 784 SLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAA 823 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 107/432 (24%), Positives = 187/432 (43%), Gaps = 15/432 (3%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDN 359 + R + R + A D LT LPN A+ QA E A + L +DN Sbjct: 312 LHREIQDRQRDQERIYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDN 371 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + I + L +++ + + +L G E +L+L G +G + Sbjct: 372 FKHVNDSLGHRIGDALLVEIAQRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAK 431 Query: 420 ILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + +H + L + F + + L+ ++ A + Sbjct: 432 MQEAALQPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKADGRN-SFRFF 490 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMT 534 + Q+ + + L N +R AL++ L L+ QP I G + +L + G ++ Sbjct: 491 TPTMQAQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVS 550 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ VL + L L T +VNL + Q + + Sbjct: 551 PAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELV 610 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 RL Y + P + LE+TE A ++ +++ ++QLH G R+++DDFGTGY++ LK Sbjct: 611 DRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLK 670 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R Q +KID FV+D+ + D IV +I +A+A + AE VET Q L + G Sbjct: 671 RFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGC 730 Query: 714 QYLQGYLIGRPQ 725 QG+ RP Sbjct: 731 DEAQGFYFSRPL 742 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 92/443 (20%), Positives = 182/443 (41%), Gaps = 16/443 (3%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFC 353 ++ L+ + R + + A D LT LPN A+E A + + Sbjct: 130 TIGLVGIGRDITERKQSEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVL 189 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + ++ ++ ++ + +L G E +++L E+ + Sbjct: 190 FIDLDRFKNINDTLGHDAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQ 249 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + S + + + + + + E Q L+ ++ Sbjct: 250 AARVAQKILSAAIQPLDVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGK 309 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 + ++ ++++L N +R AL++ + L+ Q RN + G + ++ Sbjct: 310 N-NYQFYSPDLKVRSLERLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQH 368 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQ 586 + G ++P F+PL + L VL + P +VNL Sbjct: 369 PELGTISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFD 428 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N+ I + ++P+ + +EITE +AE ++ + + G R+AIDDFG GY Sbjct: 429 DNLINDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGY 488 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ +KR D +K+D F++DI N D I +I + K SL+V+AE VETQ+Q+ Sbjct: 489 SSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQEN 548 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L QGY +P + Sbjct: 549 FLRDSACDQTQGYYFSKPVSPEE 571 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 113/474 (23%), Positives = 208/474 (43%), Gaps = 20/474 (4%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV--RIYHRSEWLNRRWHLQALTDP 330 L + + F + ++ + + ++++ + + + ++ + + + + A D Sbjct: 450 NLYDKTEQFFRKDQSSFPVEYVISSIKEGTEIVGEVITFKDVTQRKQMEEEIKYHAYFDS 509 Query: 331 LTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L+ Q + L +D +F++ G +R + Sbjct: 510 LTDLPNRVLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANR 569 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGA 439 L + ++ + + G E + L ++E + +VN + SR H + + M Sbjct: 570 LSACVPKSATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSI 629 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F N +T + L+ +S + E + +T + + L N + AL Sbjct: 630 GISIFPDNGDTTEILVKNADTAMYKSK-EISGSSYHFFSEGMDTRTFESIKLENDLYKAL 688 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +Q +L++Y QP N + EG + ++ + G++ PDKF+P+ + L VL Sbjct: 689 EQEELVIYYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVL 748 Query: 557 ESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + + L SVNL L Q ++ + + + +SP+ + LE+TE Sbjct: 749 KEACRQLKKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENL 808 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 N ES++ +++L G +AIDDFGTGY++ LK+L +KID FV+D+ + Sbjct: 809 IVRNTESTLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD-- 866 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA I +I LAK +L V+AE VET++Q L +QGY RP D Sbjct: 867 DAAITNTIITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAED 920 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 103/440 (23%), Positives = 190/440 (43%), Gaps = 21/440 (4%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLE 361 R S+ + + + A DPLT LPN R L + + L +DN + Sbjct: 331 RDITTSKAASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNFK 390 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + ++ + L ++E + + +L G E +++L + Sbjct: 391 TLNDTLGHDVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLENLSLQAIEAANKAKK 450 Query: 422 NSRQIHW--------NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +++I + N F GN+ ++ LL Q QS A Sbjct: 451 VAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRN-T 509 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGG 531 + + + + +R A++ L+ Q + G+ G + ++ + G Sbjct: 510 WHFFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVSSSGQTLGAEALIRWQHPERG 569 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNI 589 ++P F+PL + L VL+S L + + +VN+ L Q++ Sbjct: 570 QVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDF 629 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ KR+ I+P + LE+TE N + + L K G ++DDFGTGY++ Sbjct: 630 VEQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSL 689 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 + LK+L + IKID FV+D++T+ D IVR+I ++ + +SV+AE VET +++ L Sbjct: 690 QYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLL 749 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 G + QGYL +P P+ + Sbjct: 750 DNGCTHYQGYLFSKPVPINE 769 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 101/439 (23%), Positives = 186/439 (42%), Gaps = 16/439 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRI 357 L +VR + A D LT LPN L+ QA + L + Sbjct: 462 LAIVRDITDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDL 521 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + + ++ L ++E + + ++ G E ++++S E L + Sbjct: 522 DRFKSINDTLGHVAGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKI 581 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + S+ + N+ + + + + +Q LL ++ A Sbjct: 582 AEKILAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKN-AF 640 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGG 531 ++ Q + ++L N++R AL++ + +++ QP + + G + ++ D G Sbjct: 641 QYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLG 700 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIA 590 ++ P +F+P+ + L L++ R +VNL + QK Sbjct: 701 LLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFI 760 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + K+ ++P + LE+TE S AE S + +L + G +AIDDFGTGY++ Sbjct: 761 ELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLS 820 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK + +KID F++D+ N D IV +I +A +L V AE VE Q L Sbjct: 821 YLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLST 880 Query: 711 LGVQYLQGYLIGRPQPLAD 729 +QGYL+ P P A+ Sbjct: 881 RNCNEIQGYLLSSPLPEAE 899 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 105/443 (23%), Positives = 188/443 (42%), Gaps = 17/443 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCC 354 + +L + A D LT LPN AL QA + Sbjct: 605 LSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARRLNKFVAVLL 664 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE----T 410 L +DN + ++ G IRS+ L + + L + G E +L+L+ + T Sbjct: 665 LDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLLTDLDDIQNT 724 Query: 411 EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + +L R + ++ + + + + LL + ++ + Sbjct: 725 TSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTAMYEAKKNGR 784 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 ++ Q ++ + +R+AL +G++ L QP + G + +L Sbjct: 785 N-GYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQS 843 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQ 586 + G ++P +F+PL + L VL+ + A + +VNL Q Sbjct: 844 PEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQ 903 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++A I ++ + +SP + LEITE N E+++ + +L K G + +IDDFGTGY Sbjct: 904 PDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGY 963 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+L D IKI FV+DI T+ D I+++ +AK+ + ++AE VE QQ A Sbjct: 964 SSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLA 1023 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L G +QGY +P P + Sbjct: 1024 FLLLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 105/446 (23%), Positives = 196/446 (43%), Gaps = 18/446 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGK 350 + FSV + R+ S + H A D LT LPN ++ + Sbjct: 1028 VHFSVLRKRVARLLDASR-AEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQF 1086 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G + +++ ++ ++ N+ + +L G E ++L E+ Sbjct: 1087 AVLFLDLDRFKLVNDTLGHEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKIES 1146 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + S + ++ + + + G+ E + L+ ++ Sbjct: 1147 PRVAAEVAAKICSVLSKVFAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKE 1206 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + E+ + K++ L +R AL+Q +L LY QP N E + ++ Sbjct: 1207 QGN--SYQFYEKGMETAAVKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIR 1264 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 + G++ P +F+PL + L A +L + + GP +VN+ Sbjct: 1265 WHHPEHGLIPPSEFIPLAEETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRE 1324 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L ++++ +I+ + K + P+ + LEITE A +++ +L + G + AIDDFG Sbjct: 1325 LEREDLVDKIVTILKETGLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFG 1384 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK DI+KID F+ D+V+N DA I++ I LA + L VVAE VETQ Sbjct: 1385 TGYSSLNYLKSFPVDILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQA 1444 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ L QG+ + P A+ Sbjct: 1445 QEEFLKAHQCDRFQGFYLSEPLSAAE 1470 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 107/438 (24%), Positives = 186/438 (42%), Gaps = 16/438 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRI 357 + ++ + + R AL D LT LPN LE+ E + + + + Sbjct: 484 MDLLVEINERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDL 543 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G + + L ++ N+ + +L G E ++VL+ + + Sbjct: 544 DRFKLVNDTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGV 603 Query: 418 VNILNSRQIHWNNTGLD---MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + L + + + ET L+ + A A Sbjct: 604 IEDIQQNFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCAQ 663 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + +++ L N + AL G LY QP + G + ++ + G Sbjct: 664 YF-NRSLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKG 722 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIA 590 +++PD F+PL + L VL LA SVNL L + +++ A Sbjct: 723 MISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFA 782 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + + Y + + LE+TE NAE ++ ++++H G +I++DDFGTGY++ Sbjct: 783 REVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLS 842 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D +KID FV+DI +T DAMI ++I +A +L V+AE VET Q LL Sbjct: 843 YLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRD 902 Query: 711 LGVQYLQGYLIGRPQPLA 728 G + QGYL +P P+ Sbjct: 903 YGCEQYQGYLFAKPLPVE 920 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 107/439 (24%), Positives = 181/439 (41%), Gaps = 22/439 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 + R A D LT LPN L Q EA + + +D+ + Sbjct: 583 DITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALLFIDLDHFKT 642 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------PETEGR 413 ++ G ++ + R L + E++ + ++ G E ++VL +TE Sbjct: 643 LNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKNRQEAANQTEAV 702 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + ++ +L S H F G+Q ++ LL Q +S A Sbjct: 703 GERILAVLGS-PYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMYKSKERGRN-A 760 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-GEGYDEILARLKYDGGI 532 + + + ++ L +R A++ LL+ Q G + ++ GI Sbjct: 761 VRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGTRVTGAEALVRWQHPQRGI 820 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIA 590 + P +F+PL + L VLE+ LA D +VN+ + + Sbjct: 821 VPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKADFV 880 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ + R P + LE+TE N + + + L G A+DDFG GY++ Sbjct: 881 DNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLS 940 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL D +KID FV+D++ ++ DA+I R+I LA++ L V+AE VET+ Q+ L Sbjct: 941 YLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAA 1000 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G QGY RP P+ D Sbjct: 1001 AGCYAYQGYYFCRPLPIED 1019 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 95/430 (22%), Positives = 181/430 (42%), Gaps = 16/430 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEF 362 ++ Q D LT L N L Q + + +D +F Sbjct: 504 DITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKF 563 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ G +++I L +++ + + ++ G E +L+L G +V + Sbjct: 564 VNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDAGLSTGIVQRIM 623 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 ++ + + + + T + L+ +A Sbjct: 624 DGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHAD-IAMYRAKETGRNNFQFYTS 682 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPD 536 ++ + +++ L +R A+++G+ +L+ QP R + G + ++ + G++ P Sbjct: 683 SMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPM 742 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIR 595 +F+ L + L V+ + G R SVNL Q+++ I Sbjct: 743 RFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLESIAL 802 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + PQ + +E+TE ++ + ++ + +L G +++IDDFGTGY++ LKR Sbjct: 803 ALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKRF 862 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D++KID FV DI T+ DA IV SI LA + L+V+AE VET++Q A L + Sbjct: 863 PIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQ 922 Query: 716 LQGYLIGRPQ 725 +QGY RP Sbjct: 923 IQGYFFSRPI 932 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 98/455 (21%), Positives = 181/455 (39%), Gaps = 15/455 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----- 342 E L ++ + + L + R D LT LPN L + Sbjct: 685 ESVLISPVSQVDGRVMNYLAIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYA 744 Query: 343 ---APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 A + L +D+ + ++ G + + + + L +++ + + + G Sbjct: 745 LSLAQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGD 804 Query: 400 ELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 E +L+L G + G ++ S+ + L + + E + L Sbjct: 805 EFILILPGTDENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKN 864 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNK 514 A H + + + + L N +R AL +G L L+ QP ++ Sbjct: 865 AD-TAMYRVKHDGRNGFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDG 923 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 G + +L + G ++P +F+P+ VL + +K L P Sbjct: 924 HVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPM 983 Query: 575 F-SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VNL Q N+ + + + + + LE+TE A + + ++ +++LH Sbjct: 984 IMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTG 1043 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +++IDDFGTGY++ LKR + +KID FV DI + D IV +I ++A + + Sbjct: 1044 GIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQ 1103 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AE VET Q + L G +QGY +P P Sbjct: 1104 TIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAE 1138 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 103/441 (23%), Positives = 191/441 (43%), Gaps = 27/441 (6%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 S+ A DPLT LPN R L+ +Q + + +DN + Sbjct: 566 DITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFIDLDNFKN 625 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------PETEGR 413 ++ G + + + L ++E + + ++ G E +++L +TE Sbjct: 626 LNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDLSDNILDAAEQTESV 685 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCAHHHV 471 ++ LN D F+ N ++ LL Q + + + Sbjct: 686 GSKILASLN-VPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQAKKAGRNTM 744 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYD 529 D R + + ++ L +R A+++ LY Q ++ G + +L + + Sbjct: 745 RFFDPR---MQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPLGAEALLRWMHPE 801 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQK 587 G+M P +F+P+ + L VLE+ L D + S+N+ Q Sbjct: 802 HGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQP 861 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ Y I P + LE+TE N ++++ + L K G ++DDFGTGY+ Sbjct: 862 DFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYS 921 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + + LKRL D +KID F+++I +++ D IV +I +A++ + V+AE VET++Q+ L Sbjct: 922 SLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQL 981 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L + G + QGYL +P P+ Sbjct: 982 LLRKGCNHFQGYLFSKPVPVE 1002 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 102/438 (23%), Positives = 173/438 (39%), Gaps = 16/438 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCC 354 + + + A D LT L N +L +A + Sbjct: 361 THFIAIFSDITARKRAEADIQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMF 420 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + ++ + R L ++E + + +L G E ++VL G + Sbjct: 421 LDLDRFKHINDSLGHPVGDELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDV 480 Query: 415 QHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 H+ L ++ + T L F + L+ + A Sbjct: 481 THVAAKLLAQLSAPYCVDTTELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRA 540 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKY 528 + ++ T ++ L +R A+ +G+ L+ QP R+ G + ++ Sbjct: 541 -KFQFYTDEMNRAATARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHP 599 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQK 587 G++ P +F+PL + + VL + R SVNL L +K Sbjct: 600 QDGLIAPLRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREK 659 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + P + LEITE N + ++ ++ L G RIAIDDFGTG++ Sbjct: 660 CLVDTVWTTLAASGLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHS 719 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK D +KID F+ DI + D MIV + LA LSV+AE VE+ Q A Sbjct: 720 SLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVAR 779 Query: 708 LHKLGVQYLQGYLIGRPQ 725 L +LG LQG+ RP Sbjct: 780 LRELGCDELQGFHFSRPV 797 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 103/458 (22%), Positives = 193/458 (42%), Gaps = 21/458 (4%) Query: 287 TEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 +Y + A + +L V + + L ++ A D LT LPN + Sbjct: 531 RDYGVQISAAPIAGRDGRVLGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDR 590 Query: 344 --------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + + +D+ + ++ G + ++++ + L ++ ++ + + Sbjct: 591 VHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICR 650 Query: 396 LPGSELLLVLSGPET---EGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 L G E +++LS + +G + IL ++ T +++G F G+ E Sbjct: 651 LGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPGDGED 710 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 L+ + +S + V + ++ L +R AL G +++ QP Sbjct: 711 PDTLMKRADAAMYRSKREGRNR-YHFFSKAVDDAASARLQLEADMRRALAAGQFIVHYQP 769 Query: 511 IRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + + + +L + G+ +P F+P+ + L VL + L Sbjct: 770 VVHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWS 829 Query: 568 -CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 G +VN+ P+ L Q + + + + + EITE + E+++ Sbjct: 830 GTALGGISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEM 889 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + +L G RIAIDDFGTGY++ LKR D +KID FV+D+ + D +VR+I + Sbjct: 890 LRRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAM 949 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 A++ L VVAE VET+ Q A+L + QGYL RP Sbjct: 950 ARSLRLHVVAEGVETEAQAAILAAMECPAFQGYLFARP 987 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 109/441 (24%), Positives = 197/441 (44%), Gaps = 27/441 (6%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNLEFM 363 + A DPLT LPN R L+ +QE + + +D+ + + Sbjct: 372 VTERKKAEEAIQNLAFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFIDLDDFKTL 431 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET---------EGRL 414 + G +R + L ++E + + ++ G E +L+L + E Sbjct: 432 NDTLGHDTGDKLLRQVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAATHAELVA 491 Query: 415 QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCAHHHVL 472 Q ++ +LN + ++T F G+QETL+ LL ++ + V Sbjct: 492 QKVLRVLN-KPYLLDSTPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRNTVR 550 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDG 530 D+ + + ++ ++R A+ +L+ QP N G+ G + ++ Sbjct: 551 FYDTT---MQEVVNAKSVMEASMRQAITGQQFVLFYQPQINSNGQIIGAEALVRWRHPQK 607 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKN 588 G++ P+KF+PL + VL++ + L +VN+ Q + Sbjct: 608 GLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQPATAQITMAVNVSARQFHQID 667 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + R+ + +PQ + LE+TE + E + ++ L K G ++DDFGTGY++ Sbjct: 668 LVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSS 727 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL D +KID FV+DI+ ++ DA I R++ LAK+ +V+AE VE +Q +L Sbjct: 728 LAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQML 787 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +G + QGYL GRP P+ + Sbjct: 788 IDMGCRVFQGYLFGRPVPIEE 808 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 114/442 (25%), Positives = 181/442 (40%), Gaps = 19/442 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG------KSFCCLRI 357 +L + + + H A DPLT LPN L + + + + Sbjct: 595 AILAINTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQVRHGQVGALLLIDL 654 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET------- 410 DN + ++ G M ++ I + L +++ + L ++ G E ++VL G Sbjct: 655 DNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIVLEGLSASPGDAGS 714 Query: 411 -EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 R+ + +R + F+ TL L + Q+ AH Sbjct: 715 LATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRADLAMYQAKAHG 774 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYDEILARLK 527 AL + + + L +R AL G L+ Q + G G + +L Sbjct: 775 RN-ALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDARGCVSGAEALLRWQH 833 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLL 585 G + P F+PL + L L VL+ L +VN+ Sbjct: 834 PQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFR 893 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + A +++ +R P+ + LE+TE N + ++ + L G ++DDFGTG Sbjct: 894 QADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTG 953 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL D IKID FV+D++ + DA I RSI L ++ +L VVAE VET Q Sbjct: 954 YSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQH 1013 Query: 706 ALLHKLGVQYLQGYLIGRPQPL 727 A L + G Q QGYL RPQP Sbjct: 1014 AFLAEHGCQAYQGYLFNRPQPA 1035 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 102/446 (22%), Positives = 183/446 (41%), Gaps = 26/446 (5%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 +L + + + R A D LT LPN AL A + G + + Sbjct: 1042 AILAIDTDIGQRKATEREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFI 1101 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET----- 410 +DN + ++ G ++ + L ++ + + +L G E ++++ G T Sbjct: 1102 DLDNFKTLNDTLGHDQGDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIEGLSTHPGEL 1161 Query: 411 ---EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRF-DGNQETLQPLLGQLSWLAEQSC 466 + + + + F DG T+ LL Q Q+ Sbjct: 1162 AMSARTVGEKILAVLATPYVLQGYHYRSTPSIGVAPFGDGRTSTVGELLKQADLAMYQAK 1221 Query: 467 --AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEI 522 + + D + T + L N +RTAL + +L+ QP ++ G G + + Sbjct: 1222 TAGRNTLRFFDPG---MQAVVTARAELENDLRTALAREQFMLHYQPQIDRRGSVTGVEAL 1278 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLM 580 + G+++P +F+PL + L VL + LA + +VN+ Sbjct: 1279 VRWPHPQRGMVSPGEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVS 1338 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + ++R + LE+TE + E+++ + L G ++D Sbjct: 1339 SRQFHHEAFVEDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLD 1398 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKR+ D +KID FV+D++ + DA IV +I L+++ L V+AE VE Sbjct: 1399 DFGTGYSSLSYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVE 1458 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQP 726 T +Q+ L + G + QGY RP P Sbjct: 1459 TAEQRTRLEQAGCRAYQGYFFSRPLP 1484 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 510 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 110/442 (24%), Positives = 194/442 (43%), Gaps = 17/442 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCC 354 L + + R A D LT LPN RAL A E +A + Sbjct: 409 THYLAIEEDITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMF 468 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR- 413 L +D+ + ++ G + + + + L +++ ++ L +L G E +L+L G E Sbjct: 469 LDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAK 528 Query: 414 --LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 Q ++ +N + L++ + + + L +A Sbjct: 529 KIAQELMRAINE-PYRIGSHELNVMASIGIAVYPADGMDFETLCKNAD-VAMYRAKQEGR 586 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 A S + + +T+ + +LN +R A+ Q L ++ QP + + G + +L Sbjct: 587 NAYRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHP 646 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQK 587 + G ++P +F+P+ + L + VL + +VNL + Sbjct: 647 ELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHA 706 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++++ K PQ + LE+TE A + + ++ + LH+ G R++IDDFGTGY+ Sbjct: 707 GLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYS 766 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ +A +KID FV+DI T+ D IV +I +AK L +AE VET +QQA Sbjct: 767 SLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAF 826 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + G QGY +P P AD Sbjct: 827 LREEGCHEAQGYHYSKPLPAAD 848 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 510 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 97/436 (22%), Positives = 176/436 (40%), Gaps = 16/436 (3%) Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNL 360 VR + + Q+ D LT L N L+ +Q + + L +D Sbjct: 317 VRDITIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRF 376 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + ++ L + + L +L G E +V++ + M Sbjct: 377 KVINDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQK 436 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + N L + + + E + LL Q+ Sbjct: 437 ILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGN-GFQFC 495 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMT 534 E + + K + L +R AL G +L+ QP I + + +G + ++ D G+++ Sbjct: 496 SEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMIS 555 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRI 593 PD F+PL + L VL + P + +VNL LQ + I Sbjct: 556 PDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESI 615 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + + I P + LE+TE + + + +L + GF +++DDFGTGY++ L+ Sbjct: 616 QTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLR 675 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D +KID F+ D+ ++ A + S+ +A + + +AE VET++Q A L Sbjct: 676 RFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCEC 735 Query: 714 QYLQGYLIGRPQPLAD 729 +QGYL +P P D Sbjct: 736 DSIQGYLFSKPLPAND 751 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 510 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 106/437 (24%), Positives = 183/437 (41%), Gaps = 20/437 (4%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEF 362 + RR H A D LT LPN AL+QA L +D + Sbjct: 963 DISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKP 1022 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-ETEGRLQHMVNIL 421 ++ G ++ + L + +++ + ++ G E L+L + E L+ + + Sbjct: 1023 INDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVA 1082 Query: 422 N------SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 +R + + L L+ + Sbjct: 1083 ELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKN-NFQ 1141 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGI 532 + ++ + +++ L + +R AL+ G+ +L+ QP +G G + +L G+ Sbjct: 1142 FYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGL 1201 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P +F+P++ + L A+ +L K L + K + P+ SVNL + Sbjct: 1202 VPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGE 1261 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI + I P + LE+TE S+ +M + L + G IA+DDFGTGY++ Sbjct: 1262 RIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNY 1321 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK+ D++KID FV + DA I R+I +A + +L V+AE VE+Q Q L + Sbjct: 1322 LKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREH 1381 Query: 712 GVQYLQGYLIGRPQPLA 728 G +QGYL GRP P Sbjct: 1382 GCDEVQGYLFGRPMPAE 1398 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 107/447 (23%), Positives = 186/447 (41%), Gaps = 30/447 (6%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + + + + H A DPLT LPN R L + + +DN + Sbjct: 462 DITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKA 521 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + + + L +++ + + +L G E ++++ + + V + Sbjct: 522 LNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVEAVA 581 Query: 423 SRQI----------------HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + N F + + LL Q Q+ Sbjct: 582 GKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAK 641 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEIL 523 A+ + + T +V L +R A++ G LY QP E G + +L Sbjct: 642 DSGRN-AIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALL 700 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMP 581 G++ P +F+PL + L VLE+ LAT +VN+ Sbjct: 701 RWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSA 760 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + Q + +++ + +PQ + LE+TE SN E + + L G ++DD Sbjct: 761 HQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDD 820 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL D +KID FV +++T+ DA I + I LA++ L+V+AE VET Sbjct: 821 FGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVET 880 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++Q+ L + G QGYL +P PLA Sbjct: 881 EEQRNFLAESGCHAYQGYLFSKPLPLA 907 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 101/446 (22%), Positives = 191/446 (42%), Gaps = 21/446 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKS 351 L + + + R A D LT LPN L+ A + Sbjct: 847 GRVTNYLSIKEDITEQKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLA 906 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L ID+ + ++ G + + + + + L+++ + L + G E +LVL + + Sbjct: 907 VLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDEDTLSRFGGDEFILVLPDTDAD 966 Query: 412 GRLQHMVNILNSR----QIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSC 466 G IL + I + + G A DG + + L + A+Q Sbjct: 967 GAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDG 1026 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEIL 523 ++ + ++ +++LL N +R AL + L+ QP ++ + G + +L Sbjct: 1027 RNN----FRFFTSEMQARSARRLLLENALRQALSRNQFELHYQPQISMQDGKIVGAEALL 1082 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPL 582 + G ++P +F+P+ + L VL + ++ + P ++NL + Sbjct: 1083 RWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAV 1142 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q ++ ++++ +++P + LE+TE A N ++ + LH G R++IDDF Sbjct: 1143 QFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDF 1202 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ L++ + + +KID FV+D+ + IV +I LA + +AE VET Sbjct: 1203 GTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETA 1262 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q A L G +QGY RP +A Sbjct: 1263 GQLAFLRLQGCNEVQGYYFSRPLTVA 1288 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 102/455 (22%), Positives = 182/455 (40%), Gaps = 30/455 (6%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 ++ ++ + + H A D LT LPN R + E ++ + Sbjct: 360 TIGIVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHGALL 419 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +DN +F++ +G + + + + L +++ + +L G E +++L + G Sbjct: 420 LIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILEDIDGAGN 479 Query: 414 LQHMVNILNSRQIHWNNTGLD-------------MGYGAAWGRFDGNQETLQPLLGQLS- 459 ++ N FD T + LL + Sbjct: 480 GTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELLRRADT 539 Query: 460 -WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE- 517 ++ + + D + T + L +R A+D+ L Q ++ G Sbjct: 540 AMYQAKAAGRNTLRFFDPE---MQAAVTHRAALETELRKAIDEQQFHLCFQVQMDQSGRP 596 Query: 518 -GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPR 574 G + +L G + P F+PL + L VL + + LA + G Sbjct: 597 TGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLT 656 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ Q ++ L + + LE+TE + E+ + + +L + G Sbjct: 657 LAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLG 716 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 R ++DDFGTGY++ LKRL + +KID FV+D++T+ DA I +I L L V Sbjct: 717 IRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEV 776 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET Q L +G + QGYL GRP PL + Sbjct: 777 IAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLE 811 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 110/439 (25%), Positives = 193/439 (43%), Gaps = 21/439 (4%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEF 362 + + QA D LT LPN R Q + L +D + Sbjct: 597 DITEKKRKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSGRYGALLSLDLDQFKR 656 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG-----RLQHM 417 ++ +G M + + R L ++E + + ++ G E L++L+G +E R + + Sbjct: 657 LNDTFGHSMGDKLLIEVARRLTSCVREEDTVARMGGDEFLVILNGLGSEQNEAAIRAELI 716 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + + R + T F G+ + + LL + QS A A+ Sbjct: 717 AEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRN-AI 775 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGI 532 + + K+ L +R AL++ + LL+ Q + G G + +L G Sbjct: 776 CFFDSSMQEILEKRGQLETALRGALERKEFLLHYQLQMDSSGRPIGAEALLRWNNAKLGS 835 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR--FSVNLMPLTLLQKNIA 590 ++P +F+P+ + L VLE+ LA D + R +VN+ + + Sbjct: 836 VSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAAFV 895 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ + ++ I P + LE+TE + S+ +E L G + ++DDFGTGY++ Sbjct: 896 AKVRNVLQQSGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLS 955 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L RL D +KID FV+DI T+ DA IV++I +A + + V+AE VET++Q+ L Sbjct: 956 YLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLDL 1015 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G Q QGYL +P P+ + Sbjct: 1016 RGCQAYQGYLYAKPMPIEE 1034 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 98/444 (22%), Positives = 186/444 (41%), Gaps = 20/444 (4%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCC 354 + +V + + Q+ D LT LPN +AL A + + Sbjct: 507 TNYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFF 566 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D+ +F++ G M ++ R L ++ + + + G E ++VLS Sbjct: 567 IDLDHFKFINDSLGHDMGDKLLQIAARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDA 626 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCAHH 469 + + R L + + + Q LL + C + Sbjct: 627 AKVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRN 686 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + ++ ++ + +R AL++ + L++ QP + G + ++ Sbjct: 687 N---FQFYTGDLNDIVLARLTMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQ 743 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLL 585 + G ++P F+PL + L VL + D P +VNL P Sbjct: 744 SPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFR 803 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q+++A + R+ + ++P+ + LE+ E + + ++ ++ L + G ++ +DDFGTG Sbjct: 804 QEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTG 863 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR D++KID FV+DI + A IVR++ LA +L VVAE +ET+ Q Sbjct: 864 YSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQL 923 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L L +QG+ RP P A+ Sbjct: 924 GYLRGLACDEMQGFYFSRPVPAAE 947 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 106/434 (24%), Positives = 185/434 (42%), Gaps = 16/434 (3%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLE 361 I R E A D LT LPN + Q + + L +D+ + Sbjct: 610 DISERKEQ-EAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFK 668 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G ++ + + L ++ ++ + + G E +L++ + + L Sbjct: 669 NINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRL 728 Query: 422 NS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 R + L + F N LQ LL + A Sbjct: 729 LDDLRRPFQIDGQALAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNR-YQFFT 787 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTP 535 ++ Q +++ L N +R AL++ L L QP I N+ G + +L + G+++P Sbjct: 788 PELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISP 847 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+PL + L VL+ + A R +VN+ L Q ++ + Sbjct: 848 ARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEA 907 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 R+ + + LE+TE +AE ++ +++ + G +A+DDFGTGY++ LKR Sbjct: 908 ALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRF 967 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D+IKID FV ++ N DA IV +I LA+A + +AE VE+++Q L + G Sbjct: 968 SPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDV 1027 Query: 716 LQGYLIGRPQPLAD 729 +QGYL GRPQ + Sbjct: 1028 VQGYLTGRPQSAGE 1041 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 90/442 (20%), Positives = 181/442 (40%), Gaps = 16/442 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + + + QA D LT LPN L E + Sbjct: 441 AHFISVFNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHTKLAVLL 500 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + I+ + + +++++ + +L G E +++ + E Sbjct: 501 LDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDIRDERAA 560 Query: 415 QHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + L + ++ N + F + + L ++ Sbjct: 561 ATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRAKDVGRN 620 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ + +++ L ++R A+ L L+ QP + + + ++ Sbjct: 621 -GFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHP 679 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQK 587 G+++P F+P+ + L V+E + LA + + R ++N+ L Sbjct: 680 QLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAYQLSHG 739 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++I+ + PQ++ +E+TE + ++ ++ L + G R+A+DDFGTGY+ Sbjct: 740 KLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYS 799 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR DI+KID FV DI + IV++I +LA +++VVAE VET+ Q Sbjct: 800 SLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEF 859 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G +QGY +P P + Sbjct: 860 LRTNGCDEVQGYYFCKPLPSEE 881 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 91/430 (21%), Positives = 172/430 (40%), Gaps = 16/430 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEF 362 + + R A D LT LPN +AL +A + + + +D + Sbjct: 673 DITQRKLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKI 732 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ G ++ + L ++E + + + G E ++++ L + + Sbjct: 733 INDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIM 792 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 ++ L + + + LL A Sbjct: 793 ATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHAD-AAMYRAKESGKNTFRFYAA 851 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPD 536 + + + + L N +R A+++ + +L+ QP + + G + ++ + G+++P Sbjct: 852 EANTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPM 911 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+PL + L ++ + + R +VNL + + I Sbjct: 912 QFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIAD 971 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 ++P + LEITE NAE + ++ H G + IDDFGTGY+++ LK Sbjct: 972 ALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHF 1031 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV+DI + D I ++I +A + + VVAE VETQ+Q A L K G Sbjct: 1032 PIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQ 1091 Query: 716 LQGYLIGRPQ 725 +QG+L P Sbjct: 1092 IQGFLFSEPL 1101 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 104/446 (23%), Positives = 186/446 (41%), Gaps = 17/446 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKS 351 S S + + + + + A DPLT LPN +A+E+A Sbjct: 334 SNSCNYVGVFTDISQIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVG 393 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + + + + ++E + L +L G E LLVL Sbjct: 394 VLYIDLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDL 453 Query: 412 G----RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 G Q ++N+L S + + + + F + L+ Q+ Sbjct: 454 GDPAFVAQSLINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKK 513 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILA 524 E +S +++++ N +R AL +L+L+ QP+ + G + ++ Sbjct: 514 EGRN-TYRYHTEALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVR 572 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLT 583 ++ P KF+P+ + L VL + K +VNL Sbjct: 573 WQPPGKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQ 632 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +N+ G + R+ + + + LE+TE + E S+ + +L G +AIDDFG Sbjct: 633 FQSENLVGMVQRILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFG 692 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR D +KID FV+D+ + D I +I +A+ L V+AE +E+++ Sbjct: 693 TGYSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEE 752 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L + Y QGYL RP P + Sbjct: 753 QLAFLRQQDCDYYQGYLFHRPVPAIE 778 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 127/684 (18%), Positives = 249/684 (36%), Gaps = 61/684 (8%) Query: 94 TFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG---LVTPIGIKCSMYLVGSFFDFP 150 + A+ + +TS RL WLG + +GI ++ F P Sbjct: 11 LVSLSVFIAVTAAYTSFSFASRITSTSGKIRLLWLGGGSVAMGVGIWSMHFIGMLAFRMP 70 Query: 151 LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI------------ 198 + D+ + ++L+ ++ + RM P Sbjct: 71 FPVH------------YDVRTTLLSLLMAIVVSGFALRMTSLPRIGPANLLMAGTLMGLG 118 Query: 199 --------LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYE--NDFIAGYLVPVFF 248 + ++ ++ + LS L A+S L +D + F Sbjct: 119 IGAMHYTGMMAMEMPMAIRYDPFLVFLSILIAVSASTAALRIVSTLRSDVAVADMPKKFL 178 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 +I + + Y + + + + LA + + I + L+ Sbjct: 179 SALIMGAAISGMHYTGMAAARFPLRMSGTPLKNSSDAWLAVTIGLASFMILAIGLILSLV 238 Query: 307 YMVRIYHRS------EWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------F 352 + + N + H AL D LT LPN LE +Q + Sbjct: 239 DSHLATRTAGLVGSLKAANEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDGAFSV 298 Query: 353 CCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG 412 L +D + ++ G ++ + R L + + + ++ G E ++V + G Sbjct: 299 FFLDVDRFKPINDSLGHSTGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQKDPG 358 Query: 413 RLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 ++ + + + + + L + F + T + LL + + Sbjct: 359 KVHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYAKSKG 418 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARL 526 + ++ ++ + N +R +++ + +LY QP E E + ++ Sbjct: 419 SG-QIQFYSGELNDSAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWN 477 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 + GI+ P F+P + L +++ + R +VNL L + Sbjct: 478 HPEKGILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFI 537 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 +++ I+ + + P+ + LEITE + E +M + + + G +AIDDFGTG Sbjct: 538 NQDLMKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTG 597 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y+++ LK+ D +KID F+ DI N DA IVR+I L +L V+AE VE+Q Q Sbjct: 598 YSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQL 657 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 +L + QG+ RP P + Sbjct: 658 EMLKAMECDAYQGFFNSRPLPPGE 681 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 108/437 (24%), Positives = 191/437 (43%), Gaps = 23/437 (5%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFM 363 + A DPLT LPN R L + + + +DN + + Sbjct: 698 ITDRKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHALASSTRSGREGALLFIDLDNFKTL 757 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------PETEGRL 414 + G + ++ + L ++E + + +L G E +++L +TE Sbjct: 758 NDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFVVMLEELSEQTLEAAAQTESIG 817 Query: 415 QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + ++ LN F ++++ LL Q Q+ L Sbjct: 818 EKILLTLNQ-PYLLAAHEYRNSPSIGATLFGNKPQSIEELLKQADIAMYQAKKAGRN-TL 875 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGI 532 + + + LL + AL+ LY Q E G + ++ + + G+ Sbjct: 876 RFFDPQMQETVIARALLERELSKALENDQFQLYYQIQMTDLNEPFGAEALIRWIHPERGL 935 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIA 590 + P+ F+PL + L L VL++ + + +VN+ + Q + Sbjct: 936 IPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNVSARSFFQDDFV 995 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 +I + +R+ I+P+ + LEITE ++ E ++ + L K G + A+DDFGTGY++ + Sbjct: 996 TQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDFGTGYSSLQ 1055 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL D +KID FV+DI T++ D IV +I +A + +L V+AE VET+QQ+ LL + Sbjct: 1056 YLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETEQQRQLLIE 1115 Query: 711 LGVQYLQGYLIGRPQPL 727 G QGYL G+P P+ Sbjct: 1116 SGCSQYQGYLFGKPAPI 1132 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 97/435 (22%), Positives = 187/435 (42%), Gaps = 25/435 (5%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 R A D LT LPN R Q + + L +D + ++ Sbjct: 184 ERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKLIND 243 Query: 366 HYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLSGPETEG----RLQHMVNI 420 G + + ++ + L + E + + + G E ++ LS Q ++++ Sbjct: 244 TLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQKIIDV 303 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL---SWLAEQSCAHHHVLALDSR 477 + + L + + + + L+ + A++ ++ L Sbjct: 304 FRT-PFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQLFA--- 359 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMT 534 ++ + +++ L N +R AL++ + +L+ QP N E + ++ G++ Sbjct: 360 -PEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVP 418 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+PL + L VL + + + +VNL P L Q +++ + Sbjct: 419 PSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETV 478 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 R+ ++P +++E+TE +AE ++ +L + G RI+IDDFGTGY++ LK Sbjct: 479 ARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLK 538 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + +KID FV++I +N D I ++ +AK +L VVAE VET +Q +L L Sbjct: 539 KFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNC 598 Query: 714 QYLQGYLIGRPQPLA 728 +Y+QG+L P P Sbjct: 599 RYMQGFLFSEPAPAE 613 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 104/433 (24%), Positives = 180/433 (41%), Gaps = 16/433 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + R A D LT L N +L + + + +D + Sbjct: 458 DISELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKT 517 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + + L ++E++ + +L G E ++ L G + H+ + + Sbjct: 518 INDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDIT 577 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S L + G+ + LL + A+ E Sbjct: 578 REISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRG-NYQFFTE 636 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPD 536 ++ TT+++ L + +R A+ + + LL+ QP R+ G + ++ G+++P Sbjct: 637 DMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPA 696 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 F+P+ + + A VLE + L R S+NL L K + RI Sbjct: 697 DFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHE 756 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 L +S + LE+TE + ++ + S+ ++ L G ++IDDFGTGY++ LK L Sbjct: 757 LLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLL 816 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 +KID FVKDI ++ DA I LA L VVAE VET+ Q L +G + Sbjct: 817 PIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEK 876 Query: 716 LQGYLIGRPQPLA 728 +QGYLI +P P Sbjct: 877 VQGYLISKPLPAD 889 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 93/436 (21%), Positives = 183/436 (41%), Gaps = 22/436 (5%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDN 359 ++ + R A D LT LPN AL +A + + +D Sbjct: 380 ILADITERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFIDLDR 439 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ---- 415 + ++ G + +R + L L++E + + +L G E +++L + Sbjct: 440 FKIINDTLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSG 499 Query: 416 HMVNILN-SRQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLA 473 +++ L+ + + + G + DG + + + + A+ + +++ Sbjct: 500 KIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNYQFF 559 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 ++ +++ + +R A+ + +L L QP + G + +L Sbjct: 560 AAD----MNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTD 615 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNI 589 G+++P +F+P+ + + VL + +A K R +VN+ L +++ Sbjct: 616 GMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDF 675 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + + + + LEITE N + +++ +E+L + G +AIDDFGTGY++ Sbjct: 676 CETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSL 735 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK D +KID FV DI + D I LA + L+V+AE VET+ Q LL Sbjct: 736 AYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLR 795 Query: 710 KLGVQYLQGYLIGRPQ 725 G +QG+L +P Sbjct: 796 ANGCDEVQGFLFSKPL 811 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 107/441 (24%), Positives = 184/441 (41%), Gaps = 17/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCL 355 + ++ + + R DPLT LPN R ALE+A Q + + Sbjct: 616 HYVGVMTDISQLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFV 675 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---PETEG 412 +D + ++ G + + R L ++E++ L +L G E L++L PE Sbjct: 676 DLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDAA 735 Query: 413 RLQHMVNILNSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + L + H N L +G + + T+ L+ Q+ Sbjct: 736 AVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRN 795 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKY 528 ++ +++ L + AL + +L+ Q R+ G + ++ Sbjct: 796 -TYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSA 854 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 G++ PD+F+PL + L VL + +VNL L Sbjct: 855 TEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSP 914 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ R+ R+ + + + + LE+TE E ++ + L G R++IDDFGTGY+ Sbjct: 915 DLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYS 974 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL D +KID FV+DI ++ D I +I +A+ L+V+AE VET +Q Sbjct: 975 SLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDF 1034 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L + G QGYL GRP P Sbjct: 1035 LIRQGCTAGQGYLFGRPLPAE 1055 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 118/555 (21%), Positives = 211/555 (38%), Gaps = 24/555 (4%) Query: 198 ILWRR---DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 + WRR + E+R + ++LLL D V + F L Sbjct: 301 LFWRRLLESLQQGRRSEERNRLVVERTNQAILLLEPGAGTIIDANPATCVLLGFSRNELT 360 Query: 255 VGKLRYPFLNLTWAVS----TLCLLNYNQNFLQGVETEYSLAFILAVLISFSV-CLLYMV 309 + V + E + + + L M Sbjct: 361 GADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVEAMATQVPHGDDQALCLMF 420 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLE 361 QA D LT LPN LE A + + +DN + Sbjct: 421 HDITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFK 480 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---ETEGRLQHMV 418 ++ G +RS+ + ++ + +L G E ++VL+ + + Sbjct: 481 VVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDDAVTVAESF 540 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L + + + F + +T++ L+ + A + Sbjct: 541 RNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKAD-TAMYHIKESGRNSFQFFA 599 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 E ++ + ++ + +R AL++G++LL+ QP G + ++ D G+++P Sbjct: 600 EEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISP 659 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTLLQKNIAGRII 594 F+P+ L VL + L H R SVN+ + + R++ Sbjct: 660 ADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVV 719 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 R+ ++ +SP V LE+TE N + ++ + +L + G I+IDDFGTGY++ LKR Sbjct: 720 RIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKR 779 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D++KID F+ D+V DA IV +I +A + VVAE VET +Q LL + + Sbjct: 780 FPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCE 839 Query: 715 YLQGYLIGRPQPLAD 729 +QG+ RP P + Sbjct: 840 EIQGFYFSRPLPPEE 854 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 110/435 (25%), Positives = 183/435 (42%), Gaps = 18/435 (4%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEF 362 + R + A D LT LPN +A A + + +D + Sbjct: 495 DITERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKN 554 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG----RLQHMV 418 ++ G + ++ + L ++ ++ + +L G E + +LS ++ + M+ Sbjct: 555 INDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMI 614 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L + L + + + ET LL Q+ Sbjct: 615 ESLTEK-FTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRN-NFKFYS 672 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 ++ + +++ L +R A+ Q L +Y QP + + G + +L + G ++P Sbjct: 673 PDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISP 732 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRII 594 F+P+ + L VL +VNL L Q N A R++ Sbjct: 733 AVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVV 792 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + + + ++LEITE S ES + +EQL G R+A+DDFGTGY++ RLK Sbjct: 793 TILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKN 852 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +KID FV+DIVT+ DA IV + LA A +L V AE VETQ+Q + L + Sbjct: 853 LPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCE 912 Query: 715 YLQGYLIGRPQPLAD 729 QGYL RP P ++ Sbjct: 913 EYQGYLFSRPIPASE 927 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 97/430 (22%), Positives = 185/430 (43%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + A D LT L N L+Q + + + + +D + ++ Sbjct: 655 ERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTIND 714 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + ++++ L ++ N+ + +L G E +++L E + + + Sbjct: 715 SLGHHIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDAL 774 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 I + L + + + T+ L+ Q+ A+ E ++ Sbjct: 775 RPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYFTAE-MN 833 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG---YDEILARLKYDGGIMTPDKFL 539 + + +R A+D+ + ++ QP+ + + Y+ ++ G++ P +F+ Sbjct: 834 AAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFI 893 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + L VL L + + P ++NL P+ N+ I R+ + Sbjct: 894 TVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICRILR 953 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 Y ++P + LEITE + E ++ ++ L GFR++IDDFGTGY++ LKR D Sbjct: 954 DYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVD 1013 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID F+ D+ N D IV +I LA + LSV+AE VET++Q LL L + QG Sbjct: 1014 TLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQG 1073 Query: 719 YLIGRPQPLA 728 Y + +P P Sbjct: 1074 YYMAKPMPAE 1083 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 103/454 (22%), Positives = 191/454 (42%), Gaps = 20/454 (4%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA 348 Y+ + +I S L ++ + D LT LPN E+ Sbjct: 323 YNEDHSIRGIIETSRDLTDILNSEAELNEKTQHLQFVTTHDQLTHLPNKELFFDRLERAT 382 Query: 349 GK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 K + + +D + ++ G + ++ + + L +++ + L ++ G E Sbjct: 383 FKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVAKRLSTSIRKTDTLARMGGDE 442 Query: 401 LLLVLSGPETEGRLQHMVN-----ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 L+++ + + + IL S I + + G + D Sbjct: 443 FLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGHELFITPSMGISIAPTDTQHPKELLAF 502 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IR 512 +++ + + ++ + ++ L + +R A++Q +LY QP I+ Sbjct: 503 AEIAMYQAKGLGGNKCQFY---TAEMNSRAKTRIELESYLRKAVNQDQFVLYYQPQFDIQ 559 Query: 513 NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + E G + +L G+++P+ F+PL + + VL+ Sbjct: 560 SGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHS 619 Query: 573 P-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 P R +VN+ P + I R+ + I P+ + LEITE + +S++ ++QL Sbjct: 620 PIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLK 679 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G +AIDDFGTGY++ LKR +KID FV+DI T+ DA I +++ LA + + Sbjct: 680 AKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMN 739 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 L VVAE +ETQ+Q L + G + QGYL P Sbjct: 740 LKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPV 773 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 100/459 (21%), Positives = 182/459 (39%), Gaps = 19/459 (4%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYH---RSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 Y + + L + ++ R + R A DPLT LPN R L+ + Sbjct: 389 YPQLLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLLDDRLQ 448 Query: 346 QEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 E + + +D + ++ G + + I L +++++ + ++ Sbjct: 449 VELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMG 508 Query: 398 GSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E L+VL+ M + R ++ L + + + L Sbjct: 509 GDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTL 568 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 + ++ + E ++ ++ +++ L + AL + +L LY QP+ Sbjct: 569 VKHADVAMYRAKDEGRN-SFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKA 627 Query: 515 EG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDK 570 EG + +L D G+++P F+PL L VL S + Sbjct: 628 EGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGG 687 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 VN+ ++ A + + ++P + LE+TE + + ++ ++ L Sbjct: 688 APLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHL 747 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G +AIDDFGTGY++ LKR D +KID +FV+ I NT DA +V +I L + Sbjct: 748 RALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSL 807 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VET +L + G QG+ P P + Sbjct: 808 GLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEE 846 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 109/444 (24%), Positives = 186/444 (41%), Gaps = 22/444 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + + R + R A D LT LPN L EQ + + L + Sbjct: 785 VSVQRDITERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDL 844 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG--------PE 409 DN + ++ +G + + + LL ++ + + +L G E ++V+ + Sbjct: 845 DNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQ 904 Query: 410 TEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRF-DGNQETLQPLLGQLSWLAEQSCAH 468 + + + S+ + F + Q T+ LL + ++ A Sbjct: 905 EASLVADKILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAA 964 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARL 526 + + TK+ + +R AL + ++ LY QP + +G G + ++ Sbjct: 965 GRN-TFRFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQGSLLGAEALVRWE 1023 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTL 584 G+++P F+ L + L VL + L + G SVN+ L Sbjct: 1024 HPQQGLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQL 1083 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q + R+ + K +PQ++ LE+TE N E + + L G ++DDFGT Sbjct: 1084 HQHDFIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGT 1143 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL +KID FV+D++ ++ DA IV++I L + VVAE VE+ +Q Sbjct: 1144 GYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQ 1203 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 Q L K G QGYL GRPQP Sbjct: 1204 QQFLEKHGCLEYQGYLFGRPQPAE 1227 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 110/440 (25%), Positives = 184/440 (41%), Gaps = 23/440 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLEF 362 + + A D LT LPN R L ++ + + +DN + Sbjct: 384 DITDRKRAEQEIERLAFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALLFIDLDNFKD 443 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS---------GPETEGR 413 ++ G M H + + LL ++E + + + G E +++L + E Sbjct: 444 LNDTLGHDMGDHLLSQVAARLLACVRETDTVARFGGDEFVVMLETLRPELTEAASQAEIV 503 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + ++ LN F + ++ LL + Q+ Sbjct: 504 AEKLLASLNQ-PFALGGQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQAKGAGRNTQ 562 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGG 531 + + + L +R L +G+L +Y QP+ + G + ++ G Sbjct: 563 -RFFDPDMQAAVNARSNLEADLRQGLARGELCVYYQPVVDHRARLLGVEALVRWRHPVRG 621 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNI 589 +++P F+PL Q L QVL++ L + SVN+ Q Sbjct: 622 MISPADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGF 681 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 +++ + P+ + LE+TE + E ++ +EQL + G A+DDFGTGY++ Sbjct: 682 VAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSL 741 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL D +KID FV+D++T+ DA IVR+I LA++ L VVAE VET Q A L Sbjct: 742 SYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLR 801 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 G + QGYL GRP P+ D Sbjct: 802 LHGCEGFQGYLFGRPGPVED 821 >UniRef50_B9ZQM9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQM9_9GAMM Length = 792 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 117/512 (22%), Positives = 216/512 (42%), Gaps = 22/512 (4%) Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 ++ + L VF +I ++ +P + L ++Q + +Y + + Sbjct: 264 DEAVNHRLDDVFMLIDASSGTRIYHPLTECVYD-GMASGLRHDQMLVSRTGQQYEIEEVA 322 Query: 296 AVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------AP 344 + + + S ++ R RS L R A D LT LPN E+ A Sbjct: 323 SPIRNRSGAIIGAALVFRDVTRSRSLERDLIWAARHDELTGLPNRAEFERRLRKMVIHAR 382 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 S L +D + ++ G +R + ++ ++ L +L G E ++ Sbjct: 383 RNGIDHSLIYLDLDQFKVVNDTCGHPAGDELLRQLATQFQERLRSSDVLARLGGDEFGIL 442 Query: 405 LSGP---ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL--GQLS 459 L E E + + + + W +G D + + + + Sbjct: 443 LERCTLGEAEAIAEKIRASVAEGRFEWQGKVFTVGVSIGVAPIDPDTGDAEQFMSKADAA 502 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RNKEGE 517 + + + S +E V + + I A++ L L+ Q I + +G+ Sbjct: 503 CYLAKEAGRNRIHVTHSGDENV-AYCEDHMHCVQAISEAIEADRLWLHGQNICPVSGKGK 561 Query: 518 GYDEILAR-LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFS 576 GY E+L R L G +++P F+P +F + + D V+ +L +A +P R+S Sbjct: 562 GYTEVLVRVLDQKGELLSPGTFIPAAERFGIMPQIDRWVIRRVLTHMA-NPGSGFKGRYS 620 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL +L + I ++F+ + P + EITE A +N + + +++L G R Sbjct: 621 VNLSGQSLCDIEMLDFITKIFRHTRVDPSRICFEITETAAIANLDQASRFMKELRGLGCR 680 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 A+DDFG G +++ L+ L+ D IKIDG FV+D+ + + +V SI + L VA Sbjct: 681 FALDDFGVGMSSFGYLRDLKVDYIKIDGSFVRDMAEDPIHHAMVESIHHIGHVMGLETVA 740 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 EFV + L ++G+ Y QG+ + RP+PL Sbjct: 741 EFVSDPRLLVSLREIGIDYGQGFGLHRPEPLE 772 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 106/505 (20%), Positives = 202/505 (40%), Gaps = 20/505 (3%) Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 L+ VF I+ + P + L N+ + EY++ A + Sbjct: 237 LLEVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHT-ALIGRHGNEYAIEDSAAPIRDQD 295 Query: 303 VCLLYMVRIYH---RSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKS 351 +L +V ++H + + + A D LT LPN +AL A + + Sbjct: 296 GNVLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALTIARRDQEFIA 355 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ G + ++ + R L ++ ++ + + G E +++L Sbjct: 356 LMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEFMILLPELTNY 415 Query: 412 GRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + L + + + + F + E + L A Sbjct: 416 FSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNAD-AAMYHAKS 474 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILAR 525 ++ + + L + +R A+++ + +LY QP IR + G + ++ Sbjct: 475 LGRNNYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRW 534 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTL 584 G++ PD+F+P+ L L V+ + +VNL + L Sbjct: 535 QHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQL 594 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q N + + + P + LE+TE A + + +L G ++A+DDFGT Sbjct: 595 RQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGT 654 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL + +KID F++DI T+ DA I+ +I ++ L+V+AE VE Q Sbjct: 655 GYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQ 714 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L K G +QG++ RP P + Sbjct: 715 LEFLKKEGCDQMQGFIASRPVPADE 739 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 125/598 (20%), Positives = 216/598 (36%), Gaps = 23/598 (3%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 D KI + DA F L + L +L+ L + +R I+ Sbjct: 260 VDMRRKIYSQGVDAVQYFLFCFLGFCLISSLTGYILYAKLLASRKERKDTEKRYRSVISQ 319 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + S + L Y D + GV L+ Sbjct: 320 ASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTLYDIMEDDRSGVDWRINRILSE- 378 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 L + G E L L V + + I R + H+ A Sbjct: 379 ---KVCFLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICMVLRDISERKRFEGELMHM-A 434 Query: 327 LTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN Q + L +D + ++ G ++ Sbjct: 435 HHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGHHTGDMLLKE 494 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG----RLQHMVNILNSRQIHWNNTGLD 434 + L ++++ + + +L G E +++ T + ++++ ++ + Sbjct: 495 VADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSA-PFRLEKHEMF 553 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + + + +T + LL + E ++ + ++++ + Sbjct: 554 ITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRN-TYQFFSEEMNSRVSERLSMETG 612 Query: 495 IRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL + + LL+ QP N G + ++ + G++ PD F+PL + L Sbjct: 613 LRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPI 672 Query: 552 DLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + R SVN+ N+ I + + + P + LE Sbjct: 673 GEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELE 732 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE N E ++ + +L + G IAIDDFGTGY++ LKRL ADI+KID FV I Sbjct: 733 ITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGI 792 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 N D +V +I +L L +VAE VE Q+Q L + Q +QGY +P P Sbjct: 793 PGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAE 850 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 110/460 (23%), Positives = 199/460 (43%), Gaps = 28/460 (6%) Query: 295 LAVLISFSVCLLYMVRIY---HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 + + S LLY V I+ + + + H A DPLT LPN R L + +Q Sbjct: 263 INPVRDISGNLLYYVGIFSDVTKRKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVG 322 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +DN + ++ G + + + + L ++ + + +L G E ++ Sbjct: 323 ARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVV 382 Query: 404 VLSGPET--------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 VL + + + S+ N F G+Q++L+ +L Sbjct: 383 VLESLSSVPDEAATQADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVL 442 Query: 456 G--QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 + ++ + + D ++ + L +R +++ L LY Q + Sbjct: 443 KFADTAMYQAKTAGRNAIRFYD---PVMQASIEARAELEEELRQVVERNQLRLYYQVQMD 499 Query: 514 KEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + +L + G+++P +F+P+ + L VL++ L D Sbjct: 500 SSNRPLGAEVLLRWQHPERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPL 559 Query: 572 --GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ + ++ R + P + LE+TE N E ++ + + Sbjct: 560 TCDLTLAVNVSAKQFRSMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVEDTIAKMRE 619 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G ++DDFGTGY++ + LKRL D IKID FV+DI +++ DA IV++I +++ Sbjct: 620 LKLLGVSFSMDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEV 679 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+V+AE VET+ Q+ L G QGYL GRP PLA+ Sbjct: 680 LGLNVIAEGVETEAQREFLDLRGCHAFQGYLFGRPAPLAE 719 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 95/445 (21%), Positives = 179/445 (40%), Gaps = 21/445 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGK--S 351 + + + + A D LT LPN +AL A + G+ + Sbjct: 947 TEYYIGSFVDISERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVA 1006 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + + + L +++++ + +L G E ++VL+G + Sbjct: 1007 VMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADAL 1066 Query: 412 GRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL--GQLSWLAEQSCA 467 + IL SR L F + E+++ L+ + +S Sbjct: 1067 AAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAG 1126 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY--DEILAR 525 ++V ++ + + L + AL Q +L+ QP + + + + +L Sbjct: 1127 RNNVQFF---TASMNEAASDRRQLEEDLHLALQQKQFVLHYQPQVDAQRRVFAVEALLRW 1183 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLT 583 G++ P +F+PL L VLE+ + + + +VN+ Sbjct: 1184 QHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQ 1243 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q + + + +P + LE+TE N ++ + + G ++DDFG Sbjct: 1244 FRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFG 1303 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L RL D +KID FV + N DA+I ++I + ++ L VVAE VET+ Sbjct: 1304 TGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEA 1363 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ L G QG+L RP + Sbjct: 1364 QRQFLDSHGCDGYQGFLFSRPLAVD 1388 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 103/448 (22%), Positives = 197/448 (43%), Gaps = 27/448 (6%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 L ++V L + H A D LT LPN R L E+ + L Sbjct: 469 LFFIVHDITERRHLEEKMHDLAFYDLLTKLPNRRLLLDRLEKALLSGTRSRHHSALMFLD 528 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG--------- 407 +D+ + ++ +G + + + +L ++E + + G E ++++ Sbjct: 529 LDHFKVLNDLHGHDIGDQLLVEVANRILGCIREQDSAARFGGDEFVVMIEDLSENLSDAV 588 Query: 408 PETEGRLQHMVNILNSRQIHWNN---TGLDMGYGAAWGRFDGNQETLQPLLG--QLSWLA 462 + + + + L + + F ++E L+ LL ++ Sbjct: 589 NQADSVAEKIRCALAAPYLLKRGEEVISHHCSSSIGVTLFRDHEENLEQLLKWTDMAMYH 648 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYD 520 + + + D ++ + L N + TAL++ L+ Q +++G EG + Sbjct: 649 AKDAGRNVIRFFD---PVMQTAIENRAALENDLHTALEERQFELFYQIQVDRDGRAEGAE 705 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 +L G+++P +F+PL L VL+++ +A +++ +VN+ Sbjct: 706 VLLRWRHPQRGLVSPAQFIPLAEDTGLIVPIGEWVLDTVCAQIAKWQGEQRNLVIAVNVS 765 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 Q N + ++ +R+ +SP + LE+TE N + ++ ++ L FG ++D Sbjct: 766 AKQFRQSNFVELVQQIIQRHQVSPALLKLELTESLVLDNIQDTIDKMKVLKAFGVSFSMD 825 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LK+L D IKID FV+DI T+ D ++V++I DL + V+AE VE Sbjct: 826 DFGTGYSSLSYLKQLPLDQIKIDQSFVRDIATDKTDLVMVKTIVDLGVNFEMDVIAEGVE 885 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ Q LL + G QGYL +P P+ Sbjct: 886 SEVQLGLLKQCGCSRFQGYLFSKPVPVE 913 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 87/433 (20%), Positives = 185/433 (42%), Gaps = 15/433 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 + + + + + A DPLT L N L + + Sbjct: 1018 YVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLFID 1077 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D+ + ++ G + + + + +L ++++ + + + G E ++VL G + Sbjct: 1078 LDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDTGENGAVHV 1137 Query: 417 MVNILNSRQIHWNNTGLDMGY--GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 IL S N + + + + LL Q+ + Sbjct: 1138 AEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNVYR 1197 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGG 531 E + +++ + + + +R AL LY QP ++ G + ++ + G Sbjct: 1198 FFTME-MQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIRWNHPEMG 1256 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIA 590 ++P +F+P+ Q VL + ++ + K + +VNL + +++ Sbjct: 1257 PVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQFRYEDLP 1316 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 +++++ + +SP+ + LE+TE A +N E+ + +++L G +++IDDFGTGY++ Sbjct: 1317 KQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGTGYSSLS 1376 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR + +KID F++D+ ++ D I+ +I L+KA L +AE VETQ Q L + Sbjct: 1377 YLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQE 1436 Query: 711 LGVQYLQGYLIGR 723 +QG+ + Sbjct: 1437 KQCDEIQGFYYSK 1449 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 108/450 (24%), Positives = 192/450 (42%), Gaps = 26/450 (5%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLR 356 ++ + + ++ A D LT LPN R A+ A + Sbjct: 561 IIGSITNISEKKQQEKQIMHLAFHDGLTGLPNRRLLRSRLELAMTDADRYNYKLGLLLID 620 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK----------LYQLPGSELLLVLS 406 +D + ++ G I+ + L M+ + + +L G E +++L+ Sbjct: 621 LDRFKVINDTLGHQAGDELIQKVADVLELTMRSPDTHSRAKQEHTTVARLGGDEFIILLT 680 Query: 407 GPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 LQ N++ + N + + + L G +A Sbjct: 681 HITDVSDLQASANLIIEKFKEPFFIQNQDVFTSASIGISVYPDHGRDYDSLTGNAD-IAM 739 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 + ++ ++ T ++ + N +R AL++ + +L+ QP N E G + Sbjct: 740 YRAKENGKNQMEMYSSEINTLTMERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGIE 799 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNL 579 +L D GI++P +F+PL + L VL+ + P+ SVN+ Sbjct: 800 ALLRWNSSDRGIVSPMEFIPLAEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVNI 859 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L +K+ + + + + Q + LEITE A N + SM +++L + G +IAI Sbjct: 860 SARQLQEKDFVQAVKSILEDTQLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAI 919 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LK+L IKID F++D+ + D IVR+I +A + L+V AE V Sbjct: 920 DDFGTGYSSLAMLKQLPISNIKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGV 979 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET+ Q+ +L + YLQGYL +P P + Sbjct: 980 ETEDQKNILLQEKCNYLQGYLYSKPLPAEE 1009 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 105/446 (23%), Positives = 197/446 (44%), Gaps = 27/446 (6%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + +V+ + + + A DPLT LPN R L + + + + Sbjct: 361 IAIVQDITEHKAAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDL 420 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------P 408 DN + ++ G M +R + + L ++E + + +L G E +++L Sbjct: 421 DNFKALNDTLGHDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAA 480 Query: 409 ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSC 466 +TE + ++ +L F G++ + LL + + Sbjct: 481 QTEAVGEKILAML-GLPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQA 539 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILA 524 + V D + + T +V L + ALD+ L+ Q + G G + ++ Sbjct: 540 GRNTVRFFD---QQMQDAVTARVALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALIR 596 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSVNLMPL 582 + + G++ PD+F+ + + +L V+++ L T + +VN+ Sbjct: 597 WMHPERGLVPPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSAT 656 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + ++ +R+ I P+ + LE+TE N E ++ + L + G + ++DDF Sbjct: 657 QFHQLDFVFQVRATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDF 716 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ + LKRL D IKID FV+DI +++ D IV +I +A+ L V+AE VET+ Sbjct: 717 GTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETE 776 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q+ L G + QGYL G+P P+ Sbjct: 777 EQRQFLQDNGCTHFQGYLFGKPVPVE 802 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 97/442 (21%), Positives = 178/442 (40%), Gaps = 16/442 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCC 354 + L + R A DP+T LPN AL A + + Sbjct: 416 LLLRGTAQDITERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLF 475 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G MM +R LL ++E + + + G E +++L E + Sbjct: 476 LDMDQFKNVNDSLGHMMGDELLRQTAERLLGCVREGDTVARFGGDEFIILLENIEHSEQA 535 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + R + + E + L+ + A Sbjct: 536 SLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGA 595 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ + +++LL N + AL+ G ++ QP + G + ++ Sbjct: 596 -GYRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHP 654 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQK 587 + G++ P +F+P+ L VL + + + SVNL P Sbjct: 655 ERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHP 714 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ G + R+ + + + LEITE + E ++ + ++ + G R++IDDFGTG++ Sbjct: 715 DLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHS 774 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL +KID FV I ++ DA I ++ L + L V+AE VET++Q + Sbjct: 775 SLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASF 834 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + G +QG+ I RP P + Sbjct: 835 LREHGCDAVQGFFIARPMPAGE 856 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 111/464 (23%), Positives = 205/464 (44%), Gaps = 27/464 (5%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 EY L + + + + R ++ A DPLTLLPN R L Sbjct: 546 EYLLISAVKDIKNEVANYVATFRDITANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHA 605 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +DN + ++ G M ++ + L ++E++ L +L G Sbjct: 606 LASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGD 665 Query: 400 ELLLVLSG---------PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 E +++L + E + ++ LN + F G+ + Sbjct: 666 EFVVILENLSELAMDAATKAELIGEKILAALNQV-YPLASQEYHGAASIGVTLFAGHALS 724 Query: 451 LQPLLGQLSWLAEQSC--AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ Q QS + + D + + ++ L +R A+D+ L L+ Sbjct: 725 IDELMKQADIAMYQSKKSGRNTLRFFDLDTQKI---INERAELEIELRKAVDKKQLHLHY 781 Query: 509 QPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 Q N G + ++ + G+++P F+PL L VL++ L + Sbjct: 782 QIQLNSVGTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSW 841 Query: 567 PCDK--KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 ++ + +VN+ QKN + +R+ I+P+ + LE+TE N E + Sbjct: 842 QDERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDII 901 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L + G + ++DDFGTGY++ + LKRL + +KID FV+++ +++ D IVR+I Sbjct: 902 VTMNALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIV 961 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A++ +L+V+AE VET++Q LL +G Y QGYL G+P P+ Sbjct: 962 AMAESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIE 1005 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 99/442 (22%), Positives = 186/442 (42%), Gaps = 16/442 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCC 354 + + + +R + A D LT LPN A+ A + Sbjct: 491 THFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLF 550 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D +F++ G + ++ + + ++ + + +L G E +++ + Sbjct: 551 IDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAI 610 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + S + + L + + + LL + Q+ Sbjct: 611 SLITQKIISACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKS 670 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKY 528 E ++ T+Q+ L N +R AL + + LY QPI N E + ++ + Sbjct: 671 CCQFFTTE-INTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVSVEALIRWVDP 729 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + G+++P+ F+PL + L VL++ P R ++NL L Q Sbjct: 730 ELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLSARQLEQT 789 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + R+ + K+ + LE+TE + ESS+ + L K G R+++DDFGTGY+ Sbjct: 790 DFSERVSEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYS 849 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 LKR D +KID FV+ I + DA I ++T +A + +V+A+ VET++Q Sbjct: 850 PLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGVETREQLNF 909 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L+++ V QGY I P P + Sbjct: 910 LNEIKVDEAQGYFISYPVPAEE 931 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 104/458 (22%), Positives = 187/458 (40%), Gaps = 16/458 (3%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + +L L + + +RI + + QA DPLT LPN L Sbjct: 171 FDAEEIGLLEELANNLAHGILSLRIMAEHKRYEEQLAYQATHDPLTALPNRNLLADRISQ 230 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + +D +F++ G ++ + L +++ + L G Sbjct: 231 ALAWAQRHRRWIAVLFVDLDFFKFVNDSLGHGKGDQLLKMVAERLSERVRQVDTLAHQGG 290 Query: 399 SELLLVLS---GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 + ++VL+ G E R H++ S + L + + + E Q L+ Sbjct: 291 DKFVVVLTDLRGNEEADRAVHVIREAISLPFLMDGQELVISCSIGITVYPKDGEDAQTLV 350 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE 515 +A ++ + ++ + +R AL+ + L+ QP + Sbjct: 351 KNAE-VAMYRAKEQGRNCFRYYTRELNERVASRMSMEKHLRKALENEEFELWYQPQADLN 409 Query: 516 G---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 G + ++ + G++ P F+PL + L + V+ + Sbjct: 410 TGRLSGMEGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLS 469 Query: 573 P-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 P +VNL P + + G I + + + P+ + LEI E + ES+ + +L Sbjct: 470 PLTVAVNLSPRQFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHDVESAAAMLNELK 529 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G ++++DDFGTGY++ LKR +KID FV+DI+T+ A I +SI +A + Sbjct: 530 ALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLN 589 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LSVVAE VET+ Q L G +QGY + RP P A+ Sbjct: 590 LSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRPLPAAE 627 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 111/446 (24%), Positives = 192/446 (43%), Gaps = 22/446 (4%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 I R N H AL D LT LPN R L + + Sbjct: 597 AIFAINTDITQRKSAENEILH-LALYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLF 655 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---PETE 411 + +DN + ++ G M +R + L ++E++ + +L G E +++L G + + Sbjct: 656 IDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMGDFGEDHD 715 Query: 412 GRLQHMVNILNS------RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 L + I + + + + F+ +T LL + Q+ Sbjct: 716 EALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQA 775 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE-GYDEILA 524 A A+ + + + +L + + + ++ + +L+ Q + G G + ++ Sbjct: 776 KASGRN-AMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVDSRGIIGAEALVR 834 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF--SVNLMPL 582 G++ P +F+P + L VLE+ LA+ + + SVN+ L Sbjct: 835 WQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSL 894 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + ++I + R +PQ + LE+TE + + ++ + L G A+DDF Sbjct: 895 QFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDF 954 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 G GY++ LKRL D +KID FV+D++T+ DA IVR+I LAK+ L+V+AE VET Sbjct: 955 GIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGVETG 1014 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q+ L G QGYL RP PL Sbjct: 1015 AQKDFLASHGCTAYQGYLFSRPLPLE 1040 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 109/476 (22%), Positives = 201/476 (42%), Gaps = 25/476 (5%) Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYH---RSEWLNRRWHLQALTDPL 331 L + + E ++ A + + + V ++H S + + A D L Sbjct: 340 LAADSILIHRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDVSESRAMALKMAHLAQHDFL 399 Query: 332 TLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN RA+ QA L +D + ++ G + ++ + L Sbjct: 400 TGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERL 459 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ-----IHWNNTGLDMGYG 438 + +++ + + + G E +++L+ E + L + I N + + G Sbjct: 460 IVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIG 519 Query: 439 AAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + DG + +T+ + A+ + +++ ++ + +++ + +R Sbjct: 520 ISIYPDDGMDADTVMKNADTAMYHAKANGRNNYQFFTTE----MNTRAVRRLFIEGNLRR 575 Query: 498 ALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL QG+ +LY QP + G + ++ + G++ P +F+P+ + L Sbjct: 576 ALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSW 635 Query: 555 VLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + + SVN+ + K+ + + K + P + LE+TE Sbjct: 636 VLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTE 695 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 +AESS +E L G ++AIDDFGTGY++ LKR + +KID FV DI + Sbjct: 696 SILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAID 755 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV ++ + K VVAE VET++Q A L L QG+L GRP P + Sbjct: 756 PDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADE 811 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 113/452 (25%), Positives = 192/452 (42%), Gaps = 27/452 (5%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKS 351 LL + R + ++ L A D LT LPN R L E + Sbjct: 648 GHVTGLLSVSRDITDRKKAEQQIELLAFFDALTGLPNRRLLLDRLQRAGAACQRNEKLGA 707 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET- 410 + +DN + ++ G M + + + L ++ ++ + + G E +++L G + Sbjct: 708 LLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFVVMLEGLDAD 767 Query: 411 --------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--W 460 E + ++ LN R F + T+ LL + Sbjct: 768 TALAALQAEQVAEKLLAQLN-RPFEMGAQQHYSTPSIGITLFGDQRRTVDELLKRADLAM 826 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--G 518 ++ + D + Q T + L + +R + + +L ++ QPI + G Sbjct: 827 YQAKAAGRNTQRFFDPD---MQAQVTARSQLESDLRQGIARHELTVHLQPIVDGSTRLCG 883 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFS 576 + ++ G+++P F+PL + L QVL++ + L + Sbjct: 884 AEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIA 943 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ Q + ++ +PQ + LE+TE + E ++ + QL + G Sbjct: 944 VNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVG 1003 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 A+DDFGTGY++ LKRL D++KID FV+D++T+ DA IVR+I LAK+ L VVA Sbjct: 1004 FALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVA 1063 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET Q + L G + QGYL GRP PL Sbjct: 1064 EGVETAGQLSFLKLHGCEGFQGYLFGRPVPLE 1095 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 93/456 (20%), Positives = 186/456 (40%), Gaps = 15/456 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RA 339 ++++ + + + + R QA D LT LPN +A Sbjct: 453 QHAIISPIRDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQA 512 Query: 340 LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + QA + L +D+ + ++ G ++ L+ ++E + + +L G Sbjct: 513 IAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGD 572 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E +L+L + + + + + + F ++ L+ Sbjct: 573 EFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMR 632 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 +S + E ++ + + + + + +R A+++ ++ ++ QP+ + Sbjct: 633 NADAAMYRSKREGKGVFRYFTPE-MNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGT 691 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G + +L G ++P++F+PL + L VL + + A+ Sbjct: 692 GRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEI 751 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VN+ ++ + + + P + LE+TE + + ++ I++L Sbjct: 752 FVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESL 811 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G AIDDFGTG+++ L+R D +KID F+KD+ N DA +V+SI +A + SL Sbjct: 812 GVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLK 871 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VV E VET Q+ L G QG+L RP P D Sbjct: 872 VVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKD 907 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 99/435 (22%), Positives = 191/435 (43%), Gaps = 22/435 (5%) Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMS 364 + + +R A D LT LPN L EQ + + + +D+ + ++ Sbjct: 439 YEGKEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTIN 498 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGRLQHMVNILNS 423 G + ++++ L ++ + + + G E ++VL+ E+ + IL+S Sbjct: 499 DSLGHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDS 558 Query: 424 R--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ---LSWLAEQSCAHHHVLALDSRE 478 H + L + F + + LL + A+++ +++ D Sbjct: 559 FALPFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDE-- 616 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTP 535 ++ ++ +L +R AL++ +LLLY QP+ + G + +L + ++TP Sbjct: 617 --LNKSAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITP 674 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 DKF+ L + L V+ ++ + PR ++NL K++ I Sbjct: 675 DKFINLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNIS 734 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 R+ + + + LEITE N E + + +L G I+IDDFGTGY++ LK+ Sbjct: 735 RILSETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQ 794 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 +KID FV+D+VT+ D IV +I +A + + V+AE +E ++Q L Sbjct: 795 FPIHTLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCN 854 Query: 715 YLQGYLIGRPQPLAD 729 + QGY +P +++ Sbjct: 855 HYQGYYFSKPVTVSE 869 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 101/450 (22%), Positives = 183/450 (40%), Gaps = 27/450 (6%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + L + + + A D LT LPN R L +Q + Sbjct: 581 IHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRSRRHGALLF 640 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG------- 407 + +DN + ++ G ++ + + L ++E + + +L G + +++L Sbjct: 641 IDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQDLSEQQTE 700 Query: 408 --PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + EG Q +++ L+ + + F+ +Q+T++ LL + Q+ Sbjct: 701 AATQAEGVGQKILDALHQ-PYPFGHFTHHGSASVGVALFNASQDTVEELLKRADLALYQA 759 Query: 466 C--AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDE 521 + + D + + + + +R L + LLY QP N G G + Sbjct: 760 KDAGRNTLRFFDPD---MQAVISARAEMEADMRLGLQENQFLLYYQPQVNHAGRLIGVEA 816 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNL 579 ++ G++ P F+PL L V+E+ + L +VN+ Sbjct: 817 LVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIAVNV 876 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L ++ ++ R + LE+TE + + + + L G ++ Sbjct: 877 SALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVGFSL 936 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ LKRL D IKID FV D ++N DA +VR+ + + + V+AE V Sbjct: 937 DDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGMMVIAEGV 996 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ETQ Q+ L G QGY GRP P+A+ Sbjct: 997 ETQMQRDFLEGEGCLNFQGYFFGRPVPVAE 1026 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 109/440 (24%), Positives = 197/440 (44%), Gaps = 16/440 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLR 356 L+ M +R A D LT LPN RALE + + Sbjct: 130 LIGMFVDITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVALLFID 189 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +DN + ++ G + ++++ + +++ + + + G E +++LS E+ + Sbjct: 190 LDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLESAFDAEA 249 Query: 417 MVN-ILNSRQIHW--NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + ILN+ Q+H+ + L + F + E + LL + + Sbjct: 250 VAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKKNGRNNC 309 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDG 530 + + ++ Q ++ + +R AL + +LLL+ QPI N G +G++ +L Sbjct: 310 -EFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRWQHPGD 368 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G++ P KF+ L + + ++ + + PR ++NL + QK + Sbjct: 369 GLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQFRQKTL 428 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I+R+ ++ + LEITE + + E ++ + QL + G I+IDDFGTGY+N Sbjct: 429 MENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFGTGYSNL 488 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKR Q + +KID FV+DI + D I+ +I +A A L V+AE VE +QQ A L Sbjct: 489 SFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQLAYLA 548 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 G QG+ +P P + Sbjct: 549 LHGCTRFQGFYFSKPLPAIE 568 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 97/433 (22%), Positives = 177/433 (40%), Gaps = 16/433 (3%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDN 359 + + QA DPLT L N RAL A L +D Sbjct: 583 LFSDITERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHGCKVGLLFLDLDG 642 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 ++++ G + + + R L +++ + + +L G E +V+ L + + Sbjct: 643 FKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHDLADRADLGAIAD 702 Query: 420 IL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 L + F + + +Q LL ++ A Sbjct: 703 KLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYKAKQAGKNRA-QP 761 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 + +V L +R A++Q L+ QPI + G + ++ + G++ Sbjct: 762 YAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKHPERGMI 821 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGR 592 +P +F+P+ + L VL +++ P R ++N+ + + + Sbjct: 822 SPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREAGLPEL 881 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + L + + +++ EITE +E+ + + + G A+DDFGTG+++ L Sbjct: 882 VRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFSSLSYL 941 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KR DI+KID FV+D + DA +V +I ++A + L V AE VE+ +Q+ L LG Sbjct: 942 KRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFLRALG 1001 Query: 713 VQYLQGYLIGRPQ 725 YLQGYLIG+P Sbjct: 1002 CDYLQGYLIGKPL 1014 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 105/445 (23%), Positives = 182/445 (40%), Gaps = 25/445 (5%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + +V + + H A DPLT LPN R EQ + L + Sbjct: 481 IEVVTDITDKKNREQEIHRLAFYDPLTRLPNRRLFFDRLEQAFSASARSGQHGAVLFLDL 540 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE------ 411 DN + ++ G + + L ++ N+ + + G E +++L+ E Sbjct: 541 DNFKTLNDTRGHDVGDLLLTMAAERLQEAVRANDTISRQGGDEFMVLLNNLSPERHAAIS 600 Query: 412 --GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG--QLSWLAEQSCA 467 GR+ + + + +G F G+ L + + Sbjct: 601 QAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTPADELFKRADAAMYQAKHAG 660 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILAR 525 + V D + + + L+ +R A+ QG L+ QP +G G + +L Sbjct: 661 RNQVRFFDPE---MQAELEQASALVVDLRQAIWQGQFQLHYQPQTANDGRIIGAEALLRW 717 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLT 583 + G ++P +F+PL + NL VLE LA + +VN+ Sbjct: 718 RHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWADLPAAGNCKLAVNVSARQ 777 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q I R+ P+ + LE+TE + ++ +++L G ++DDFG Sbjct: 778 FRQPEFVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQELRDLGIGFSMDDFG 837 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ +LKRL + +KID FV+D+ ++ D IV +I + + + V+AE VET++ Sbjct: 838 TGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKE 897 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q A L + G QGYL RP P A Sbjct: 898 QLATLARYGCDAYQGYLFSRPVPAA 922 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 99/455 (21%), Positives = 188/455 (41%), Gaps = 28/455 (6%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 +VCL ++ + + L A D LT LPN R Q EQ + + Sbjct: 242 AVCLTGTIQDITERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDRMLAVL 301 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ------------LPGSEL 401 L +D + ++ G + ++ + LL ++ + L + L G E Sbjct: 302 FLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRLGGDEF 361 Query: 402 LLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++LS E + + + S + + + + T L+ Sbjct: 362 TIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASDLIRNA 421 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG-- 516 Q+ +E ++ + ++++L + + AL + + ++Y QP + + Sbjct: 422 DGAMYQAKEQGRN-GYQIYDESMNAKALERIILESQLHKALKEEEFIVYYQPQVSNQSGR 480 Query: 517 -EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPR 574 G + ++ + G++ P +FLPL + L + D V+ + Sbjct: 481 VVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGFPPVT 540 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 ++N+ ++ + + + K + P + LE+TE ++ E ++ ++ L G Sbjct: 541 LAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQALKGMG 600 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 R+AIDDFGTG+++ LKR D++KID F+ DI T+ DA I + ++A L V Sbjct: 601 VRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMAHTMKLKV 660 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET+ Q L K G QGYL +P P + Sbjct: 661 IAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTE 695 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 182/442 (41%), Gaps = 21/442 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK--------SFC 353 ++ + R + R H+ A D LT LPN + + + + Sbjct: 506 GGWVVTYEDVTERHKAQARVAHM-ARHDSLTDLPNRTLFREKMGEGLNQVAIAGGAMAVL 564 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE---T 410 C +DN + ++ G +R + L + E++ + +L G E ++ GP+ Sbjct: 565 CFDLDNFKTVNDRLGHAAGDRLLRWVAARLKENVGEHDTVARLGGDEFAVLQRGPQPQSA 624 Query: 411 EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 E + +V I+ + + +G + L+ Q+ A Sbjct: 625 EKLARRLVEIIGHPP-PLESQSIHVGVSVGIAIAPDHGLDADELMKCADLALYQAKARGR 683 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 A E + + + L + +R AL+ + L QP + E G++ +L Sbjct: 684 G-AYQLFEPEMEEEARSRHALEHNLRGALEAREFHLVFQPQVRLESSELTGFEALLRWKH 742 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQK 587 G ++P +F+P+ + L VL + A+ P +VNL P+ + Sbjct: 743 PSRGFVSPAEFIPIAEENGLIVPIGEWVLRTACATAASWP----DVTVAVNLSPVQFRAR 798 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 +A + + PQ + LE+TE ++E+++ + QL G R+++DDFG GY+ Sbjct: 799 GLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATIEILHQLRALGVRVSLDDFGVGYS 858 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L++ D IKID FV + + IVR+I L + AE VET++Q Sbjct: 859 SLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEGVETEEQLDF 918 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 + + G +QGY GRP P A+ Sbjct: 919 VRECGCTAVQGYYFGRPCPAAE 940 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 100/439 (22%), Positives = 182/439 (41%), Gaps = 18/439 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLR 356 LL + + + A DPLT LPN AL + + + + Sbjct: 258 LLGVSEDIAERKRAEAQIARLAHYDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVD 317 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + ++ L ++E + + +L G E +V +G + Sbjct: 318 LDRFKTVNDTLGHPLGDALLKIAAERLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATR 377 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + +G + + LL + ++ A A Sbjct: 378 LAARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRG-A 436 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 E + Q + L +R AL G+ L+ QP+ ++ G + +L + Sbjct: 437 YHFFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPER 496 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G+++P F+PL + L + VL A P + R +VNL P + + Sbjct: 497 GMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWP---EHVRLAVNLSPAQFRDRGLV 553 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ + Q + LEITE +++++M + L G RI++DDFGTGY++ Sbjct: 554 RTVVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLS 613 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+ D IKID FV+DI+ ++ I++++ DL + + AE VETQ Q L + Sbjct: 614 YLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQ 673 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G +QGY I RP P ++ Sbjct: 674 QGCAEIQGYFISRPAPASE 692 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 107/446 (23%), Positives = 191/446 (42%), Gaps = 20/446 (4%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQE 347 A +S VC + I R E RR A D LT LPN AL+QA Sbjct: 598 AGHVSHWVCT--SIDITDRKES-ERRIRFLAEHDVLTELPNRALCIERLRLALQQARRTG 654 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +D + ++ G + +RS+ + L+ ++ + + +L G E ++VL+G Sbjct: 655 QKVAVLFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVVVLNG 714 Query: 408 PETEGRLQHMVNILN----SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + H+V + + + F + + + L+ Q Sbjct: 715 LADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMY 774 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYD 520 Q+ A ++ + ++++ N +R+A+ QG L L+ QP + + G + Sbjct: 775 QAKAQGRN-GAQFFTAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVE 833 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNL 579 +L + G + PD+F+P+ + L V+E+ + + S+NL Sbjct: 834 GLLRWHSPELGHVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINL 893 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L L + + +R+ + P + LE+TE ++ + + L + G R++I Sbjct: 894 SALQLRDPGLLDVLRASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSI 953 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L R D +KID FV+D++ + D I+++I L L VVAE V Sbjct: 954 DDFGTGYSSLNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGV 1013 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQ 725 E + + L G LQGY RP Sbjct: 1014 ERELEVQALRAAGCDELQGYHFARPM 1039 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 183/442 (41%), Gaps = 15/442 (3%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFC 353 + ++Y+ + + A D LT LPN ALE+A + + Sbjct: 597 TQQIIYIFSDITERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVM 656 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D+ + ++ G + ++ + +++ + + + G E ++LS T+ Sbjct: 657 FIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNA 716 Query: 414 LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + L + ++ + + G F N +++ L+ ++ Sbjct: 717 TTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGR 776 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKY 528 + ++ +++ L +R AL++ + +L+ QP + G G + ++ Sbjct: 777 NC-FQFYTKEMNQYAQERLELELDLRKALERDEFVLHYQPQFDPNGRIIGCEALIRWQHP 835 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQK 587 D G+++P +F+ + L V+++ SVNL L Sbjct: 836 DKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHH 895 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + I+P + LE+TE N E ++ + + G ++IDDFGTGY+ Sbjct: 896 DLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYS 955 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR + +KID FV+ + + D IV+SI +A A +L+V+AE VET +Q Sbjct: 956 SMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEF 1015 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + QGY RP AD Sbjct: 1016 LKSSRCEEFQGYYFSRPILAAD 1037 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 97/327 (29%), Gaps = 32/327 (9%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV 64 L +++ L TL+ V LS + + + W P + +S + IFG+R Sbjct: 4 EKLKHHLRYLALCATLSFVYY-LSGRLGLSLAFEQAGVSPVWPPTGIAISAVLIFGFRVW 62 Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 ++ G NL + LG+ ++ ++R T Sbjct: 63 PGIMLGALLVNLSIALPFSAAILIALGNTLEAIVAGYLLIRCAERYP----FTQVNHTAW 118 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVD-LLSLFTAVLIYNMLF 183 + ++ P+ + L + ++ L L+ L Sbjct: 119 FIAIAVMAPM-------FSATIGLVSLSMHNLIEASELGIVWSTWWLGDIVGALVIVPLL 171 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 +R + + G A + L +L + LL+ +P+ ++ L Sbjct: 172 -------------LTWFRPHESMNGGVPVMALWGTCLVSLGLALLIF-SPWHTEYDPHQL 217 Query: 244 VP-VFFIIFTLGVGKLRY----PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + + + + + ++ L F+ + L +V Sbjct: 218 LIFMMLPLLIWTALRFHHRGSTLLVTVFSGIAISGTLVGYGPFVMESTNQSLLTLQASVG 277 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 L+ + R R +Q Sbjct: 278 AIMVTILILIASQEERKRVNRRLLQVQ 304 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 105/439 (23%), Positives = 179/439 (40%), Gaps = 15/439 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 L+ V + + A D LT L N AL + + + + + Sbjct: 572 LVGTVNDVTDQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVD 631 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + +R + L ++ L +L G E LLVL G + + Sbjct: 632 LDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVLPGADERAASEV 691 Query: 417 MVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 IL S + + L + + E L+ Q+ A Sbjct: 692 AACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRN-TF 750 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 ++ +++ L +R A +G+++L+ QP + G + ++ G Sbjct: 751 QLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLG 810 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIA 590 +++P +F+PL + L + + +VNL Q N Sbjct: 811 MVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFT 870 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + PQ + LE+TE + E + + +L G +++IDDFGTGY++ Sbjct: 871 AVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLN 930 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D++KID FV+D+ T+ DA IVR+I L K +L ++AE VETQ Q LH Sbjct: 931 YLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHA 990 Query: 711 LGVQYLQGYLIGRPQPLAD 729 GV ++QGY RP P D Sbjct: 991 AGVDFIQGYYFSRPLPAED 1009 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 107/440 (24%), Positives = 192/440 (43%), Gaps = 21/440 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 C+L + R + + A D LT LPN AL A + L Sbjct: 589 CILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFL 648 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ G + + + R L ++E + L +L G E +L+L G + Q Sbjct: 649 DLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPGTDEAQASQ 708 Query: 416 HMVNILNSR----QIHWNNTGLDMGYGAAWGRFDGNQ-ETLQPLLGQLSWLAEQSCAHHH 470 +L + QI N + G A DG ETL + +Q+ + Sbjct: 709 VATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRND- 767 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLK 527 + + + + + L+N +R AL + + L+ QP + G + +L Sbjct: 768 ---FRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRH 824 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQ 586 + G+++P +F+P+ VL + ++ L + +VNL + Sbjct: 825 PELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRH 884 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N+ + R+ + P+ + LE+TE A + +++ + +L + G R++IDDFGTGY Sbjct: 885 PNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGY 944 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+ + + +KID FV+DI + D IV +I +LA + + +AE VET Q A Sbjct: 945 SSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLA 1004 Query: 707 LLHKLGVQYLQGYLIGRPQP 726 L G +QGY + +P P Sbjct: 1005 FLRLQGCDEVQGYYVSKPLP 1024 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 199/442 (45%), Gaps = 21/442 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLR 356 + ++ + R + DPLT LPN AL A + + + Sbjct: 884 HIGIISDISERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMFVD 943 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D +F++ G + ++ + + M+ + + + G E +L+L + EG Sbjct: 944 LDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTDAEGAAHV 1003 Query: 417 MVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL---GQLSWLAEQSCAHHHV 471 +L+ ++ +++ + + + + E+ + L + A+ ++ Sbjct: 1004 AKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRNN-- 1061 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKY 528 + Q +LL + +R+A++ + LLY QP + + G + ++ Sbjct: 1062 --FQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHP 1119 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 + G+++P F+P+ + L A VL + +K LA+ G +VNL + Q Sbjct: 1120 EKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQD 1179 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + G + ++ + + P + LE+TE A ++E ++ + QL+ G R++IDDFGTGY+ Sbjct: 1180 TLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYS 1239 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ + D +KID FV+ I ++ DA I+ +I +AK+ S +AE VET +Q Sbjct: 1240 SLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNF 1299 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L +QGY +P P + Sbjct: 1300 LIANSCDEIQGYYFSKPLPSTE 1321 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 91/443 (20%), Positives = 191/443 (43%), Gaps = 25/443 (5%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCL 355 + M+ I R + A D LT LPN + A +++ + Sbjct: 364 MVGSMIDITERKKAEET-IRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQKDEKIGVMFI 422 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + ++++ L+ +++ + + +L G E + L+G + Sbjct: 423 DLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRLGGDEFAIFLTGVTHREAGE 482 Query: 416 HMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL---GQLSWLAEQSCAHHH 470 I+ S I ++ + + + + + ++ LL +LA++ +++ Sbjct: 483 IAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEALLKHADAAMYLAKEQGKNNY 542 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLK 527 E + K++ L +R ALD+ L+ QP ++ + G + ++ Sbjct: 543 QFF----SEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGMEALIRWDH 598 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQ 586 D G++ P +F+P+ + L V+ + + +VN+ +Q Sbjct: 599 PDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVNISLRQFMQ 658 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 N+ I + + ++PQ + LEITE A N + ++ + +L G I+IDDFGTGY Sbjct: 659 NNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILNRLKALGVSISIDDFGTGY 717 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L + D +KID F++++ N + I+++I +A ++V+AE VET + Sbjct: 718 SSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVD 775 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L + +QGY +P P + Sbjct: 776 FLKEQLCNEVQGYFYSKPLPTKE 798 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 98/441 (22%), Positives = 177/441 (40%), Gaps = 16/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 + + QA D LT L N RA+ +A + L Sbjct: 633 HFIAIFNDVTERVRYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLL 692 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGRL 414 +D + ++ G ++ R L ++ + + +L G E ++V+S + Sbjct: 693 DLDRFKLINDSLGHAAGDALLQETARRLSASVRRGDTVARLGGDEFMVVMSDMSAEDAAA 752 Query: 415 QHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 +L S + N + + + E LL +A Sbjct: 753 ALAAKVLESLAEPMLLNGREIVATGSIGVSLYPRDGEAAATLLKHAD-VAMYRAKELGRN 811 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYD 529 ++ + +++ L N++R AL+ +L L+ QP +R+ G + ++ Sbjct: 812 RFQFYAPEMNERILERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQ 871 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKN 588 G+++P F+PL + L V++ + L +VN+ + Sbjct: 872 LGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQ 931 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + R + + P + +E+TE E +++ + +L G RI++DDFGTGY + Sbjct: 932 LTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCS 991 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR D IKID FV D+ T+ DA I I LA + + +V+AE VE + Q L Sbjct: 992 LNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFL 1051 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + G +QG+L RP P A+ Sbjct: 1052 RRHGCDEMQGFLFSRPLPAAE 1072 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 110/440 (25%), Positives = 189/440 (42%), Gaps = 25/440 (5%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG--------KSFCCLRIDNLE 361 + RR A D LT LPN R L + G + + +D+ + Sbjct: 374 EDISERKEAERRIQDLAYYDELTGLPNRRQLHETLAHAFGEASRDYLIGALLFIDLDHFK 433 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-----PETEGRLQH 416 ++ G ++ + L L+++ + L +L G E +L+L P+ E + Sbjct: 434 TINDSLGHATGDWLLKEVASRLKRLVRQGDCLARLGGDEFVLLLPSLSASPPQAEMQADL 493 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCAHHHV 471 + L S + L +G F G ++ + LL Q +S Sbjct: 494 IAERLISEIAAPYNHAGQVLHIGASVGITLFPGREQGVDDLLKQADTAMYQAKSAGRKTR 553 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKY 528 D+ + Q +++L+ N +R+AL+Q +L LY QP EG G + ++ Sbjct: 554 RFFDA---SMQLQADRRLLIHNELRSALNQQELTLYYQPQHMVEGGDIIGVEALIRWQPP 610 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQK 587 +++P +F+P+ + +L VL + P+ SVN+ Sbjct: 611 GRALVSPAEFIPIAEETDLIVDIGNWVLYEACAQYVRWEENGIHIPQLSVNVSAKQFHAT 670 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + RI + + P ++ LEITE +AE ++ + +L G AIDDFG GY+ Sbjct: 671 DFVDRIHDVLASTGMDPASLNLEITESVVLGHAEDTISKMSELKALGISFAIDDFGAGYS 730 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL AD +KID F++DI + + IV ++ +A+ +V AE VE++QQ Sbjct: 731 SLSYLKRLPADELKIDRSFIQDIPRDGDNMAIVEAVIAMARHMGFNVTAEGVESRQQLEF 790 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 L G + QGYL +P P+ Sbjct: 791 LQAQGCHFYQGYLASKPLPV 810 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 103/445 (23%), Positives = 181/445 (40%), Gaps = 21/445 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 + ++ + R A D LT LPN + E + + Sbjct: 495 IEGAIQDISAQKVAESRIQHLAFYDSLTSLPNRQLFIDRLEHTLAYSARTSKSGAVLFID 554 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL---SGPETEGR 413 +DN + ++ G + ++ + + ++E++ + + G E +++L SG E Sbjct: 555 LDNFKTLNDTMGHDLGDMLLQQVAMRIAGCLRESDTVARFGGDEFVVLLHELSGNHQEAA 614 Query: 414 LQHMV---NILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 Q + IL S ++ FD T+ +L + QS A Sbjct: 615 AQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQPTTVDEILKRADLAMYQSKAA 674 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARL 526 + + + + +V + +R L + L QP + +G G + +L Sbjct: 675 GRNV-IRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCYQPQVDNQGRLLGAEALLRWR 733 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTL 584 G++ P F+PL L V+ + K L +VN+ L Sbjct: 734 NPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQL 793 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q + +I+ + +P+ + LE+TE +N E + + +L G +IDDFG Sbjct: 794 RQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGI 853 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LK L D +KID FV+D++T+ DA+I R+I L K+ +L V+AE VET Q Sbjct: 854 GYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQ 913 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L G QGYL +P P + Sbjct: 914 REFLDNYGCDAYQGYLFSKPVPADE 938 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 110/445 (24%), Positives = 186/445 (41%), Gaps = 17/445 (3%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQE 347 A + + R + H QA D LT LPN +AL +A Sbjct: 260 APHPGQFLGTYGIARDVTDRKHAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGN 319 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + ++ + + L ++E + L +L G E L+L Sbjct: 320 EEVAVLFLDLDRFKVVNDSLGHSVGDQLLQQVAQRLRACLREGDTLARLGGDEFTLLLPA 379 Query: 408 ----PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 P E Q ++ L +N L +G F + ETL+ L+ +A Sbjct: 380 IPDRPAVERVAQKCIDALEQ-PFMVHNHRLFLGVSIGIALFPEHGETLETLIKHAD-VAM 437 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYD 520 H ++ + + + + +R AL+Q + + QP + G + Sbjct: 438 YHVKEHGKGHYTFFDQAMGSRIDHHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTGME 497 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 ++ + G ++P +F+P+ Q L +L S + L P +G R +VNL Sbjct: 498 ALIRWQHPETGEVSPREFIPVAEQTGLILPIGEWLLRSACEELLRWPDGNEGLRLAVNLS 557 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 PL + Q++ R+ + + + LEITE + ES + + L + G I ID Sbjct: 558 PLQVHQRDFVDRVRAICDETGFPLRRLDLEITENLLMRDVESVVEKLRTLSRLGVTITID 617 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L+RL +KID FV I N +V +I +A L+VVAE VE Sbjct: 618 DFGTGYSSLGYLQRLPIHALKIDQSFVHAIRENEEKGTLVETIIAMAHGLGLNVVAEGVE 677 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ 725 T++Q L +L +QG+ P Sbjct: 678 TKRQLDYLRRLQCGRMQGFYFSYPL 702 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 100/447 (22%), Positives = 180/447 (40%), Gaps = 21/447 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + + + + A D LT LPN R L + Sbjct: 676 TTEYVAIFSDITQRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVL 735 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG- 412 L +D + ++ G + + + ++E + + +L G E ++++ +T Sbjct: 736 FLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRAE 795 Query: 413 -------RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + S + G +E+ LL Q+ Sbjct: 796 ETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQA 855 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEIL 523 A+ + ++ +V L N +R AL L LY Q + + G + ++ Sbjct: 856 KDSGRN-AVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAIGAEALV 914 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMP 581 + G+++P F+P+ + +L VL++ LA +VN+ Sbjct: 915 RWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSV 974 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q I L + Y I PQ + LE+TE ++ + + L G R+++DD Sbjct: 975 QQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDD 1034 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK L D +KID FV++I T+ DA++V++I +A+ L+V+AE VET Sbjct: 1035 FGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVET 1094 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLA 728 + Q A L + G QGY G+P P+ Sbjct: 1095 EAQLAFLKQNGCMCYQGYYFGKPAPIE 1121 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 109/440 (24%), Positives = 189/440 (42%), Gaps = 16/440 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLR 356 + + + QA D LT L N +A+ +A S + Sbjct: 368 FVGVQKDITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFID 427 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 IDN + ++ G IR + + L +++ + + +L G E +L+L+ + + Sbjct: 428 IDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHT 487 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +V + + L + F + LL Q+ A Sbjct: 488 VVQRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSN-N 546 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDG 530 + ++ + ++ L N + AL+ L+L+ QP RN + G + ++ Sbjct: 547 FRFYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKL 606 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNI 589 G++ P +F+PL L + V+E+ R +VNL L QK++ Sbjct: 607 GMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDL 666 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 I + + + PQ + LEITE N E S+ + ++ G ++++DDFGTGY++ Sbjct: 667 VHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSL 726 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL + +KID F+ DI T DA+I RSI LA + + V+AE VE+ Q A L Sbjct: 727 SYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLL 786 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G +QGYL+ RP+P + Sbjct: 787 ENGCDEVQGYLLSRPRPFEE 806 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 99/439 (22%), Positives = 177/439 (40%), Gaps = 17/439 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLR 356 + V+ + A D LT LPN A L A + + L Sbjct: 642 IRGTVQDVTSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHILAVLFLD 701 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS----GPETEG 412 +DN + ++ G + + ++ + L ++E + +L G E + +L + Sbjct: 702 LDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLPRVTRAEDAAA 761 Query: 413 RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + M++ L + + ++ L F + + LL A Sbjct: 762 VARKMLDAL-ATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHAD-TAMYGAKEVGRN 819 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYD 529 ++ + +++LL N +R A+++ +L L+ QP G + ++ D Sbjct: 820 NFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHPD 879 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNI 589 G++ P +F+P+ L VL + VN+ L + + Sbjct: 880 FGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRRADF 939 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++++ +P+ + LEITE +++ + +L G +A+DDFGTGY++ Sbjct: 940 VDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYSSL 999 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL +KID FVKD+ + DA + + LA+ L VVAE VET Q+ L Sbjct: 1000 AYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLV 1059 Query: 710 KLGVQYLQGYLIGRPQPLA 728 G LQGYL RP +A Sbjct: 1060 ARGCHTLQGYLYSRPLDVA 1078 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 100/448 (22%), Positives = 191/448 (42%), Gaps = 21/448 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + M ++ + R A DPLT LPN R + Sbjct: 512 TTNYVGMFTDISVAKAASERIENLAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALV 571 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-----P 408 L +D+ + ++ G ++ + L ++E + + +L G E +L++ Sbjct: 572 FLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARLGGDEFVLLVENLSANDV 631 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E +++ + + + ++ + F+G+QE+ + LL Q+ Sbjct: 632 EAAHQIEAIGDKILMSLNQPYQLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMYQA 691 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEIL 523 L + ++ +V L ++ A++Q LY Q N G+ G + ++ Sbjct: 692 KKAGRN-TLRFFDPLMQETINMRVDLERELKKAIEQKQFELYYQVQMNSAGQPSGAEALI 750 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSVNLMP 581 + GI++P +F+P+ + L + VL L D+ K ++N+ Sbjct: 751 RWRHPERGIISPIQFIPVAEETGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSA 810 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 LQ + A ++ + +HI + LE+TE N E ++ + L + G + ++DD Sbjct: 811 KQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDD 870 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ + LK L +KID FV+D+ T+ + IV +I +A + L+V+AE VET Sbjct: 871 FGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVET 930 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q LL+ G QGY P + + Sbjct: 931 DEQLQLLNAHGCGNYQGYYFSEPLSINE 958 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 185/442 (41%), Gaps = 17/442 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 + + + + R A D LT LPN A+E+ + L Sbjct: 670 NYVGVFTDITQIKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYL 729 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP----ETE 411 +D + ++ G + + + L ++E + L +L G E L+VL E Sbjct: 730 DLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPA 789 Query: 412 GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 Q ++++L + + + + F + ++ L+ + Sbjct: 790 MVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRN 849 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 + +S ++++L +R AL G+ +L+ QP+ + + G + ++ Sbjct: 850 -TYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPP 908 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQK 587 D +++P KF+P+ + L VL + D +VNL + Sbjct: 909 DKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSE 968 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ I ++ + + + LE+TE +AE S+ ++ L G R++IDDFGTGY+ Sbjct: 969 NLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYS 1028 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR D +KID FV + + D I +I +A+ L V+AE VE++QQ + Sbjct: 1029 SLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDI 1088 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L++ G Y QGYL RP P + Sbjct: 1089 LNQHGCDYYQGYLFHRPVPAQE 1110 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 96/438 (21%), Positives = 182/438 (41%), Gaps = 15/438 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLR 356 + R R A D LT LPN RA+ A + + L Sbjct: 377 FIGSFRDITEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLD 436 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G ++ + L ++ + + +L G E ++L Sbjct: 437 LDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASM 496 Query: 417 MVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + + I + + +G F + + LL Q+ A Sbjct: 497 VADKILASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGR- 555 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + ++ + ++ L +R A+++G ++ QP +N G++ ++ Sbjct: 556 FNFYSAEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRL 615 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G+++P F+PL + +L R D+ V+ + +VNL + + ++ Sbjct: 616 GMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDLP 675 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ ++ + + + LEITE +++L G ++AIDDFGTGY++ Sbjct: 676 EQVRQVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLS 735 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL + +KID FV+DI ++ D M+V SI +A + L VVAE +E + Q A+L Sbjct: 736 YLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLS 795 Query: 711 LGVQYLQGYLIGRPQPLA 728 +QGYLI +P P Sbjct: 796 QECDEIQGYLIAKPMPAE 813 >UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2A5_METFK Length = 722 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 103/448 (22%), Positives = 193/448 (43%), Gaps = 23/448 (5%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 V + + + + L + AL D LT LPN R + + + Sbjct: 268 VQYIAIRADITQRKILEQSVQRMALYDDLTGLPNRRLMVERLQMIREACVRSHRHGAVMF 327 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE--- 411 L +DN + ++ +G ++ + + L +++ + + + G E +++L+ + + Sbjct: 328 LDLDNFKEINDTHGHEQGDRLLKQVGQRLRENIRQVDTVARAGGDEFIILLADLDEDPAK 387 Query: 412 ------GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + N L S +N L F + L ++ Sbjct: 388 ATAQAYNVAEKLRNAL-STPYIFNRIVLHTSTSVGIVMFSDKAKPKTELFKHADMALYRA 446 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEIL 523 A + + + + + LL +R AL + + LY QP+ N++G+ G++ ++ Sbjct: 447 KAQGKNR-ISMFDPSLQAEVLEYASLLADLRQALQRDEFRLYFQPVVNRDGKVIGHEALI 505 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMP 581 + G++ P +F+P+ Q L VL K L D K SVN+ Sbjct: 506 RWIHPVRGMVLPGQFIPVAEQTGLIQEIGQWVLSMACKQLNVWSEDAVKSQWTLSVNVSA 565 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + G++ ++ P+ + LE+TE ++ ++ + L G ++DD Sbjct: 566 KQFRDMDFVGKVHDAIRQSGADPKRLWLELTESMFHTDIVQTIEKMRALQDIGVHFSMDD 625 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK L D +KID FV+D++ + DA IVR+I LA +L+VVAE +E+ Sbjct: 626 FGTGYSSLSVLKLLPLDQLKIDRSFVRDVIDDPNDAAIVRTILALAGILNLTVVAEGIES 685 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L + G Q QGY G+P P+ + Sbjct: 686 SEQFDFLEQHGCQAFQGYFFGKPVPMDE 713 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 112/441 (25%), Positives = 197/441 (44%), Gaps = 17/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 + + R H A D LTLLPN +L+ E+ + + + Sbjct: 781 HYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFI 840 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ G + + + R L +M ++ + +L G E ++VLS + + R+ Sbjct: 841 DMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSDTDHD-RVA 899 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L S + +N L F + ++++ L+ ++ A Sbjct: 900 KVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRN- 958 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 ++ T++ + +R A+ +LLLY QP + + G + ++ + Sbjct: 959 NYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPE 1018 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKN 588 G++ PD+F+P+ + ++ VLE+ L LA KG R +VNL L + Sbjct: 1019 LGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDT 1078 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 I II + ++ + A+ LEITE A E + + +L + G +AIDDFGTGY++ Sbjct: 1079 IVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSS 1138 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK L D +K+D FVKDI ++ DA I + +A L+VVAE VE + Q LL Sbjct: 1139 LSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLL 1198 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +G +QGY +P D Sbjct: 1199 SGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 101/438 (23%), Positives = 187/438 (42%), Gaps = 15/438 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLR 356 +++ + + + A DPLT LPN ALE+A + + Sbjct: 434 YVFVFNDISQLKDSQEQLERLAHYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFID 493 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--ETEGRL 414 +D + ++ G + +I + L +++ + L +L G E L+V+ + + Sbjct: 494 LDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEFLVVIEEAPVQQVASI 553 Query: 415 QHMVNILNSRQIHWNNTG-LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 H + + + ++ G +G + G+ + L+ + A A Sbjct: 554 AHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSN-A 612 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 E ++ +++ + ++R AL + +L+ QP+ + G + ++ Sbjct: 613 YRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGE 672 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 ++ P +F+PL + L VL + +VNL P L+ ++ Sbjct: 673 ALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLV 732 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 G++ + + + P + LE+TE AE ++ + L + G +AIDDFGTGY++ Sbjct: 733 GQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLA 792 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D +KID FV+D+ ++ DA IV +I + + L +AE VET QQ A L + Sbjct: 793 YLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQ 852 Query: 711 LGVQYLQGYLIGRPQPLA 728 LG QGYL P P Sbjct: 853 LGCDSGQGYLFSPPLPAE 870 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 180/442 (40%), Gaps = 15/442 (3%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FC 353 + + + + + QA D LT LPN + EQ ++ Sbjct: 389 TTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVM 448 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ YG ++ R L ++ ++ + +L G E +++LS E + Sbjct: 449 FLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHA 508 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 ++ + S T + F + ET LL +A Sbjct: 509 GAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNAD-VAMYHAKQGG 567 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKY 528 ++ ++ + + + +R AL + + L+ QP + G + ++ Sbjct: 568 ERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVRADLTLIGAEALIRWRHP 627 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 + G++ P F+PL + L L + + + P SVN+ P + Sbjct: 628 EKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQ 687 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + ++ + P+A+ LEITE + E ++ + L G ++IDDFGTGY+ Sbjct: 688 TLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYS 747 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK D +KID FV+D++ + DA IV +I LA+ SVVAE VE +Q Sbjct: 748 SLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEF 807 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L Q QG+L RP P A+ Sbjct: 808 LGSRDCQNFQGFLYSRPLPPAE 829 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 102/441 (23%), Positives = 183/441 (41%), Gaps = 26/441 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + + + AL DPLT LPN R L + Q + + +DN + Sbjct: 588 DITKRKEAEEQIQFLALYDPLTHLPNRRLLNERLSKALTSSGRQRRHAALLFIDLDNFKM 647 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHM 417 ++ G + +R + L ++ N+ + +L G E +++L + +++H+ Sbjct: 648 INDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGDEFVILLEELSPNIHDATTQIEHI 707 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG--QLSWLAEQSCAHHHVL 472 + + + F ET++ LL ++ ++ + + Sbjct: 708 AQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETIESLLKSADMAMYKAKAAGKNRLF 767 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDG 530 D + + + L +R A + +LY QP ++ G G + ++ Sbjct: 768 FFD---PAMQTEVEARAALERDLRQAQREKQFVLYLQPQVDQSGHVSGAEALIRWQHPTH 824 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKN 588 G++ P +F + + L VLE K L D ++N+ L + Sbjct: 825 GLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNPDTAHLTLAINVSALQFRNPD 884 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH-KFGFRIAIDDFGTGYA 647 + R + LEITE + + ++ ++ L + G +++DDFGTGY+ Sbjct: 885 FVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERMQVLKNQLGVGLSLDDFGTGYS 944 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+L D IKID FVKDI N DA I ++ L ++ SL+V+AE VET +Q+ Sbjct: 945 SLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALGRSFSLNVIAEGVETIEQRDA 1004 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G QGYL GRP P+ Sbjct: 1005 LIARGCLTFQGYLFGRPGPID 1025 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 101/441 (22%), Positives = 191/441 (43%), Gaps = 22/441 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 + + + + A D LT LPN A+ Q Q + Sbjct: 337 HYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFI 396 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + ++ + L ++ + + +L G E +++ TEG L Sbjct: 397 DLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGNLA 456 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL---GQLSWLAEQSCAHH 469 + L + + L + + + E L+ +LA++ ++ Sbjct: 457 DLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGRNN 516 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 ++ +T ++ L + +R+A+D GD L+ QP + + G + ++ Sbjct: 517 ----YQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWR 572 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 + G+++P +F+PL + L VL +K LA SVN+ L Sbjct: 573 HRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFR 632 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + R+ + + + P A+ LE+TE + +S++ ++ L + GFRIAIDDFGTG Sbjct: 633 QGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTG 692 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 +++ L+ L +++KID FV++++ IV SI LA+A +AE VET+ + Sbjct: 693 FSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAEF 752 Query: 706 ALLHKLGVQYLQGYLIGRPQP 726 +L G + +QGY RP P Sbjct: 753 DVLQARGCRLMQGYFFARPMP 773 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 104/472 (22%), Positives = 200/472 (42%), Gaps = 26/472 (5%) Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR-------SEWLNRR---WHLQALT 328 +F+ +T F + L+ S L ++++ H E L ++ A Sbjct: 404 HHFIDQNQTSRYFEFTVTPLVDGSGQLNSVIQLGHEITNYLDIQEQLQQQKNDLDFIAYH 463 Query: 329 DPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN +A+ QA + + +D + ++ +G + Sbjct: 464 DPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDLDRFKEINDSFGHASGDLVLIECG 523 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGY 437 + L ++E + + +L G E +++ +T + ++V + S I N + Sbjct: 524 KRLKKAIREIDTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIFVNENIFHITA 583 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F + LL Q+ + ++ Q ++L+ N +R Sbjct: 584 SIGISIFPNDGTDANQLLQNADAAMYQAKEDGKN-TYHFYTKEMTEQAYNRLLMENNLRD 642 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 ALD LY QP + + G++ ++ GI+ PD F+PL + L Q Sbjct: 643 ALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEETGLIIPLGKQ 702 Query: 555 VLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 ++ + ++ + R ++N+ L + + + P + +EITE Sbjct: 703 IIAMASQTISEWHQANLTNARIAINVSAKQLRDSRFFHNLNTALNKNNCQPDWIEIEITE 762 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N E ++ + +L + G I+IDDFGTGY++ LK+L +KID FV ++ + Sbjct: 763 SSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKIDRSFVSNLPQD 822 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 DA I ++I ++++ +L ++AE +ETQ+QQ + + G + +QGY RP Sbjct: 823 KDDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSRPL 874 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 105/461 (22%), Positives = 202/461 (43%), Gaps = 29/461 (6%) Query: 294 ILAVLISFSVCLLYMVRIYHRS--EWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 I AV + V + Y+ + + + A DPLT LPN R L +Q Sbjct: 666 ITAVKDARGVVINYVASLSDITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALVAS 725 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +DN + ++ G + ++ + + L ++E + + ++ G E ++ Sbjct: 726 SRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGGDEFVV 785 Query: 404 VLSGPETEGRLQ---------HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 +L E +++ LN + H + FD + + L Sbjct: 786 MLEDLSAESIEAASQTEAVGWKIISTLN-KPYHLEKFEVHSTPSIGATLFDSRPQIIDDL 844 Query: 455 LGQL--SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 Q + + + + D + + + L +R ++++ + L+ Q Sbjct: 845 FKQADIAMYQAKKAGRNTMRFFDPQ---MQDTLNTRTALEADLRKSIERREFNLFYQIQV 901 Query: 513 N--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD- 569 + G + ++ + G+++P +F+PL + +L L VL+ L T + Sbjct: 902 DEMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNP 961 Query: 570 -KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + +VN+ Q + A ++ ++Y I P + LE+TE N E ++ + Sbjct: 962 LTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMN 1021 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 L + G + ++DDFGTGY++ + +K+L + +KID FV D+ + D IVR+I +AK Sbjct: 1022 ALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAK 1081 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L V+AE VETQ+Q+ LL G + QGYL +P P+ + Sbjct: 1082 SLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIRE 1122 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 111/484 (22%), Positives = 208/484 (42%), Gaps = 27/484 (5%) Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 +W + +LQ ++ +I++ + L+ + + + Sbjct: 425 SWQGEIFNKRKNGEEYLQWTMITAVISDHEDEIINYVITLI----DITQRKAAESKIKQL 480 Query: 326 ALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN + L + E + L +D+ + ++ G + Sbjct: 481 AFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGDKFLT 540 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL---------QHMVNILNSRQIHW 428 + + LL ++ + + ++ G E +++L +++ + + +++ L S+ + Sbjct: 541 LVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTL-SKPYYI 599 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 +N F G + + LL Q+ + + + Sbjct: 600 DNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRN-THRFFNPEMQAKVLEH 658 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFN 546 + N IR AL + + LY QP +G+ G + ++ G ++P +F+P+ + Sbjct: 659 AAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETG 718 Query: 547 LSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL+ + LA ++N+ Q +++ +RY +P Sbjct: 719 LILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRANP 778 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LE+TE + E ++ + QL K+G ++DDFGTGY++ LKRL D +KID Sbjct: 779 DRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKIDK 838 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV+D++TN+ DA I R+I LAK+ +L+V+AE VETQ+Q+ L G QGYL RP Sbjct: 839 SFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRP 898 Query: 725 QPLA 728 PL Sbjct: 899 VPLE 902 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 94/456 (20%), Positives = 196/456 (42%), Gaps = 16/456 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ----- 342 EY+ + + + + + ++ QA D LT LPN LE Sbjct: 335 EYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHA 394 Query: 343 ---APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 A + L +D + ++ G + ++ + L ++ ++ + +L G Sbjct: 395 IEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGD 454 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++VL+ ++ L + +++ + + + +G + + + L+ Sbjct: 455 EFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMK 514 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG 516 ++ + ++ + ++ L +R AL +G+ L+ QP + + Sbjct: 515 DADTAMYRAKQKGRN-TFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQT 573 Query: 517 ---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKG 572 G + ++ + G ++P F+P+ + NL + VLE + +A G Sbjct: 574 GRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTG 633 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 + +VN+ L + I L +Y + P + +E+TE + + ++ + +L + Sbjct: 634 IKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLRE 693 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++++DDFGTGY++ LKRL IK+D FV+D+ + +A IV +I LA A + Sbjct: 694 IGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDM 753 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 S+VAE VET+ ++ L G +QG+ +P P Sbjct: 754 SIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPAD 789 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 96/437 (21%), Positives = 178/437 (40%), Gaps = 22/437 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEF 362 + + A D LT L N EQ + L +D + Sbjct: 259 DISERKINEEQLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKI 318 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL---SGPETEGRLQHMVN 419 ++ G + ++ + L ++++ + + +L G E +L+L + P+ G L + Sbjct: 319 INDSLGHSFGDRLLSAVAQRLDRVVRDTDTVARLGGDEFVLLLAEVTEPDDVGLLASRIL 378 Query: 420 ILNSRQIHWNNTGLDMGYGAAWGRFD---GNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + M + G+ TL + A+Q Sbjct: 379 HELAVPHRIEGREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQEGGG----VFSF 434 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 ++ + + + + + +R AL++G+ LY QP + G + ++ L G++ Sbjct: 435 YAPEMNQRAMETMEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVV 494 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGR 592 P F+PL + L VL+ + + + +VNL ++ G Sbjct: 495 APADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGL 554 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + + P + LE+TE ++ + +E+L G R+++DDFGTGY+++ L Sbjct: 555 VREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHL 614 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + +KID F+K IVT+ A I SI +A L +AE VET+ Q A L K G Sbjct: 615 SHFPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQG 674 Query: 713 VQYLQGYLIGRPQPLAD 729 +QGYL+ RP P ++ Sbjct: 675 CDEIQGYLLSRPLPASE 691 >UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Chromatiales RepID=B8GT56_THISH Length = 958 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 118/518 (22%), Positives = 213/518 (41%), Gaps = 35/518 (6%) Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 L VF I + + P + L N+ + ++ A + + Sbjct: 439 LTKVFRIFNEFTLQPTQDPVKTCLEEGRIVALANHT-VLMSRDGATRAIEDSAAPIRDRN 497 Query: 303 VCLLYMVRIYH---RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKS 351 +L +V ++H ++ + R+ QA D LT L N EQ Q A + Sbjct: 498 GLILGVVLVFHDVSKTRQMARQLSWQATHDALTGLFNRYEFEQRLAQALAQARDRLAHHA 557 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G ++ + L+ ++E++ L +L G E ++L + Sbjct: 558 VLYMDLDQFKVVNDTCGHSAGDELLKQLAYLLMGKVRESDTLARLGGDEFGVLLENCPLD 617 Query: 412 GR---LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW--LAEQSC 466 Q + + + W +G L +L A + Sbjct: 618 KAREIAQELRQTVRDFRFSWKGKSFQIGISIGLVMISDGNLDLAEVLSAADMACYAAKDL 677 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-------NKEGEGY 519 + + + + + + + +N I AL +LY Q I + GE Sbjct: 678 GRDRIHVYHAEDADLQRRHVE-MQAINRITDALTHDRFVLYTQRIVATGAAGPDDGGEHM 736 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR----- 574 + +L + G ++ P F+P +++L D V+ +A H ++ G Sbjct: 737 EILLRMVDEKGDLVPPGAFIPAAERYDLMPAIDRWVIRRFFSTMAQHIREECGVDGSGGS 796 Query: 575 -----FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +++N+ ++ + G + + + I P A+ EITE A +N +M I + Sbjct: 797 ASGCLYAINISGASINDETFLGFVTEQLETHRIPPTAICFEITETAAIANLTRAMNLINE 856 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L K G R ++DDFGTG +++ LK L D +KIDG VKDIV++ +D +V +I + + Sbjct: 857 LRKRGCRFSLDDFGTGVSSFGYLKNLPVDYLKIDGSLVKDIVSDPIDRAMVDAINRIGQV 916 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + VAEFVE + A L +LGV Y QGY I RP+PL Sbjct: 917 MGIHTVAEFVENDEILASLRELGVDYAQGYGIDRPKPL 954 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 107/468 (22%), Positives = 198/468 (42%), Gaps = 26/468 (5%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + S A + S V + + + RSE + QA D LT LP Sbjct: 433 RRKNGEVYPLNVSISRCTNSAGIPSHYVAIFHDISEIKRSE---EKLQHQAYHDALTNLP 489 Query: 336 NFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + A + + + L IDN ++++ G ++ I LL Sbjct: 490 NRKLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCT 549 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 ++ + +L G E ++++ E + + + + + F Sbjct: 550 RQEDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVF 609 Query: 445 DGNQETLQPLLGQL---SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + +T + L+ + A+++ + + L + +++ L + AL + Sbjct: 610 PDDADTPEDLIKNADIAMYRAKEAGKNGYQLF----TAAMQQTIMQRIELEARLSDALCR 665 Query: 502 GDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + +L+ QP + E E G + ++ K DG ++ PD+F+P+ + L + D VL++ Sbjct: 666 NEFVLFYQPQVDLESEHVIGAEALIRWQKPDGQLVYPDEFIPIAEECGLITQIDHWVLKA 725 Query: 559 LLKWLATHPCD-KKGPRFSVNLMPLTL-LQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + + SVNL + + R+ + + + + + LE+TE Sbjct: 726 ACRQANKWREQSGRNFKMSVNLSSEQFAKDQELVQRVKNVLNKTGLPAECLTLEVTENAV 785 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 S+ ES++ + QL G IAIDDFGTGY++ +K A +KID FVKDI ++ D Sbjct: 786 MSDTESAIAIMTQLTALGVSIAIDDFGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDD 845 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 I SI L + ++ V+AE VE Q Q L + Q +QGY G+P Sbjct: 846 MAIAASIISLGRNLNMEVIAEGVEEQTQIDFLKQHRCQQVQGYFYGKP 893 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 91/437 (20%), Positives = 175/437 (40%), Gaps = 16/437 (3%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 +++ R + R A D LT L N +++ + L +D Sbjct: 234 VIQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDR 293 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + +R L ++EN+ + +L G E +++LS + + L + + Sbjct: 294 FKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVAD 353 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + S + + + + LL A + Sbjct: 354 KILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADM-AMYAAKESGGDTFRF 412 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIM 533 ++ + ++ + +R AL+Q + + QP + + G + +L G++ Sbjct: 413 YSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQLGVI 472 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGR 592 P +F+ L + NL V+ + + + P R +N+ +Q + Sbjct: 473 PPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDFVDM 532 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + RL +P+ + EITE + ++++ +E L K G +AIDDFGTGY++ L Sbjct: 533 VCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSCL 592 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K L + +KID F+ D+ N D IV + +AK L V AE VET+ Q + K Sbjct: 593 KHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKRE 652 Query: 713 VQYLQGYLIGRPQPLAD 729 +QG+ RP ++ Sbjct: 653 CDEVQGFYFSRPLSPSE 669 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 101/438 (23%), Positives = 186/438 (42%), Gaps = 21/438 (4%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEF 362 + + A D LT LPN R AL + + +D + Sbjct: 473 DLTERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGALLFIDLDKFKT 532 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV---- 418 ++ G + ++ + L ++E + + ++ G E +++L E Sbjct: 533 LNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIESVEAAAQTEVI 592 Query: 419 --NILNSRQIHWN--NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 IL + ++ + F N ++ L Q Q+ L Sbjct: 593 GEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMYQAKKSGRN-KL 651 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGI 532 ++ + + + L +R AL L L+ Q + + G + +L + GI Sbjct: 652 RFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSAHQTIGAEVLLRWIHPVNGI 711 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIA 590 ++P +F+P+ + L L VLE+ L + ++N+ Q A Sbjct: 712 ISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFHQNGFA 771 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + +R+ I+P + LE+TE +N + ++ + L +FG + ++DDFGTGY++ + Sbjct: 772 TEVRSVIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSSLQ 831 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKRL +KID FV+D+ T D IVR+I +A + +L+V+AE VET+ Q+ +L K Sbjct: 832 YLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQRQILLK 891 Query: 711 LGVQYLQGYLIGRPQPLA 728 + QGYL G+P P+ Sbjct: 892 NQCSHFQGYLFGKPMPIE 909 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 107/430 (24%), Positives = 180/430 (41%), Gaps = 16/430 (3%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + + QA D LT LPN ++ +Q L +D + ++ Sbjct: 424 QKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVNDT 483 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---S 423 G + ++ + L ++ + + + G E L+ + + + + + S Sbjct: 484 LGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKLS 543 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 +N L + + E Q LL ++ EE + Sbjct: 544 IPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEE-MHR 602 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 + Q+ L +R AL + + LLY QP I + G + ++ G + PD+F+P Sbjct: 603 EALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIP 662 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L A VL++ + + P R +VNL Q + I++ + Sbjct: 663 LAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLET 722 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 I PQ + LEITE A + E ++ +++L + G I IDDFGTGY++ LK + Sbjct: 723 TEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNT 782 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DIV N+ DA I ++I L++ L VVAE VET QQ + L + QGY Sbjct: 783 LKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGY 842 Query: 720 LIGRPQPLAD 729 P P + Sbjct: 843 YFCPPVPAIE 852 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 103/520 (19%), Positives = 205/520 (39%), Gaps = 29/520 (5%) Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS-----TLCLLNYNQNFLQGVETEYS 290 ++ I L+ + I LG R + + + + L + Sbjct: 380 SNLILMLLIAIMIIAAFLGFIYCRRSLIMPIYQMVNQLQRPVTEGGQVYPELLDDRRQDE 439 Query: 291 LAFILAVLISFSVCLLYMVRI----YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ 346 + + L R + + + AL DPLT LPN + EQ Sbjct: 440 FGLLAYHFNQSKMALDSNNRDLKLQINERKQAEYQLKHLALHDPLTGLPNRLLFQDRLEQ 499 Query: 347 --------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + + +DN + ++ G ++ + L ++ + + +L G Sbjct: 500 AIALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSCTGRKTDTVARLGG 559 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +++ T LNS I N ++MG + + + LL Sbjct: 560 DEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMGSSIGITIYPDDAANSEELL 619 Query: 456 GQLSWLAEQSC--AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 Q+ + V S ++ + + +L + +L + LY QP+ Sbjct: 620 RNADIAMYQAKDDGRNTVRFFTSE---MNARLQRNKEVLTDLAESLTKEHFELYYQPLFT 676 Query: 514 KEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCD 569 + G + ++ + G++ PD+F+ + + L VL + + Sbjct: 677 IDQNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDWVLAQACREIKNFLNAG 736 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + ++N+ P+ +K++ ++ + ++ +S + + LEITE N + ++ ++ Sbjct: 737 ITVFKVAINISPVQFRRKDLLQHMLMILAQHDVSAELIELEITEGAVMDNVDQAIETMQA 796 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 LH GF++A+DDFGTGY++ LKR +KID F+ D+ + I +I ++ + Sbjct: 797 LHDAGFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDLENDDDSKSITTAIIQMSHS 856 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET++Q L Y+QGY GRP P ++ Sbjct: 857 LGLHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASE 896 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 116/489 (23%), Positives = 207/489 (42%), Gaps = 24/489 (4%) Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNF-LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 P +N V + Q L E IL+++ + + L ++ Sbjct: 588 YFGIPLVNSEQKVVGVLNGFSRQRMHLPPDARE-----ILSIVAARAATELERLKADEAL 642 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHY 367 ++ A DPLT LPN + E S + +D + ++ Sbjct: 643 AEHRKQLSYLAFHDPLTQLPNRLRFTEVLEAAVGDAEGHGRYLSLLFIDLDRFKNINDSL 702 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET----EGRLQHMVNILNS 423 G + ++++ R L+ + L +L G E ++L T Q +++ L S Sbjct: 703 GHSIGDKLLQAVARRTGSLIDSADVLARLGGDEFAILLFNCVTPVVGADTAQRVIDAL-S 761 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + ++ L + + L+ ++ E ++ Sbjct: 762 QPFQIDDYSLHVSASIGITVAPVDAREPDELIKCADIAMFKAKDAGRN-TYKFYERSMNL 820 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLP 540 +T + +LL N +R AL + L LY QP + + G++ +L + G+++P +F+P Sbjct: 821 KTHELLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIP 880 Query: 541 LIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L +L S + + T + R +VN+ ++ + ++ ++ Sbjct: 881 LAEETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQ 940 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + + + LEITE + +SS+ + +L K G R+AIDDFGTGY++ LK+ Sbjct: 941 TGVPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICS 1000 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV D++T+ DA I S LA L VVAE +E Q+Q L + G Q+ QGY Sbjct: 1001 LKIDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGY 1060 Query: 720 LIGRPQPLA 728 LI RP P+A Sbjct: 1061 LISRPLPVA 1069 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 104/444 (23%), Positives = 182/444 (40%), Gaps = 25/444 (5%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDN 359 + R + + + + H A DPLT LPN + L EQ + +DN Sbjct: 539 VGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQALADCTITRQEGVLMFIDLDN 598 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-GRLQHMV 418 + ++ G ++ + L +++ + + +L G E +++L T+ Sbjct: 599 FKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGDEFVVMLQDLGTQPEAATRKA 658 Query: 419 NILNSR-------QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC--AHH 469 I+ + F+ Q ++ LL Q Q+ + Sbjct: 659 QIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTMGRN 718 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLK 527 V D + + L +R L + L++ QP ++E G + +L Sbjct: 719 TVCFFDPD---MQASVSANAALSTDLRAGLREHQFLVHYQPQVDREQRITGVEALLRWKH 775 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLL 585 G+++P +F+P+ + L VLE LA + G +VN+ Sbjct: 776 PQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFR 835 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + ++ K I P + LE+TE E ++ + L G +A+DDFG G Sbjct: 836 HPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMG 895 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKRL D +KID F+ D+ ++ DA I +I LA++ L V+AE VET+ Q+ Sbjct: 896 YSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQR 955 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 + L LG Y QG+L P P+A+ Sbjct: 956 SFLAGLGCGYYQGFLFCPPLPIAE 979 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 111/472 (23%), Positives = 212/472 (44%), Gaps = 28/472 (5%) Query: 282 LQGVETEYSLAF-ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 L+ + + + I+ V ++ V + +VR + H A DPLTLLPN R L Sbjct: 627 LRKDGSMFPIELGIVEVQMAGEVNFIGVVRDITERKQRENEIHQLAFYDPLTLLPNRRLL 686 Query: 341 EQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + L +DN + ++ G + + L+ +++ + Sbjct: 687 LDRLTEAINHSVRTRNFSALFFLDLDNFKNLNDSAGHNKGDLLLGQVAERLVNSVRQGDT 746 Query: 393 LYQLPGSELLLV---------LSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGR 443 + +L G E +++ L+ + E Q +V+ L +R+ + + + Sbjct: 747 VARLGGDEFVIIASDLSHEPTLAANQAERLAQKIVSNL-TREYNLDGLTYNSSASIGVTL 805 Query: 444 FDGNQETLQPLLGQLSWLAEQSC--AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F+ + LL Q ++ + V D + + + + +++ + +A+ Sbjct: 806 FNSENLPKEDLLKQADMAMYKAKYAGRNGVQFFDPQ---MQVSVSSRASIVSDLYSAIQS 862 Query: 502 GDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 +L+ Q N K+ G + +L + + G+++P +F+PL + L VLE Sbjct: 863 QQFVLFYQKQVNHLKQCIGVEVLLRWIHPEKGMVSPLQFIPLAEETGLIVPIGEWVLEEA 922 Query: 560 LKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 LA +K+ +VN+ + + N ++ K +PQ + LEITE Sbjct: 923 CATLAKWSLESEKQHLSIAVNISVVQFSKDNFVQTVLNALKTSGANPQLLKLEITETLLA 982 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 +N +++L + G +IDDFGTGY++ LK+L + +KID FV+DI+ ++ D Sbjct: 983 NNIPDVKAKMKELQQHGVTFSIDDFGTGYSSLSYLKQLPINQLKIDQGFVRDIINSSNDR 1042 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +++ LA + L V+AE VET+ Q+ALL +G QGYL G+P + + Sbjct: 1043 AIAQAVITLADSIELQVIAEGVETEAQRALLQSMGCHTYQGYLYGKPCRIEE 1094 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 92/441 (20%), Positives = 189/441 (42%), Gaps = 16/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 C ++++R QA D LT LPN +++ A E+ + + Sbjct: 256 CHMFVLRDITERRRQEAAIEFQATHDALTGLPNRSLFLDRVTQSINHARRNESRLALIFI 315 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G +R + + L + + L + G E +L++ E+E L Sbjct: 316 DLDKFKLINDTLGHNAGDDLLRIMSKRLQECTRNCDTLARFGGDEFVLLVDNLESEADLT 375 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 H+ L S + + F + + ++ L+ ++ Sbjct: 376 HLAARLISSVSAPVLLLGQSHSITCSLGISSFPEDGDNVEVLMRHADIAMYRAKESGRN- 434 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + + + +++ L ++++ AL+ + +L+ QP + + G + ++ Sbjct: 435 SYQFFTHQMQDRLNERLKLESSLKQALENDEFVLHYQPQVDLSTGKIIGLEALIRWQSPT 494 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKN 588 G++ P F+P + L + V+ ++ K L + K ++N+ L +++ Sbjct: 495 LGLVPPGDFIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVPVAINISALQFMEQK 554 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + Y + P+ + LE+TE + + +S+ +++L G ++IDDFGTGY+N Sbjct: 555 TEELVKQALNEYMVEPKYLELELTESLSMLDPVTSISLMQRLKDIGVSLSIDDFGTGYSN 614 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR + +KID FV + N D IV++I ++++ L +AE ET Q ALL Sbjct: 615 LSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAGQIALL 674 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 +QG+ RP P A+ Sbjct: 675 AAENCDAIQGFYFSRPLPEAE 695 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 110/446 (24%), Positives = 192/446 (43%), Gaps = 21/446 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGK 350 IS V L I R E R A D LT LPN +A+ QA Q Sbjct: 176 ISHFVALF--TDISERKEQEAR-VQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQL 232 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D+ + ++ G ++ + R L ++ + + + G E +L+L Sbjct: 233 AVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQ 292 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 G + + + L +G + +Q LL + A Sbjct: 293 PGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKA 352 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILA 524 H ++ Q +++L+ N +R A++Q L L QP + G+ G + +L Sbjct: 353 HGRN-TFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEALLR 411 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLT 583 D G++ P +F+P+ L VL+ + + + R +VN+ Sbjct: 412 WRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQ 471 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L++ + + +R+ + + LE+TE ++A+ + + + G R+AIDDFG Sbjct: 472 LMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFG 531 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKR D++KID F+ D+ + +A IV +I LA A + +AE VE + Sbjct: 532 TGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENEN 591 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 QQ L LG + +QGYL+G PLA+ Sbjct: 592 QQRFLQTLGCEAMQGYLLG--SPLAE 615 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 107/444 (24%), Positives = 191/444 (43%), Gaps = 27/444 (6%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 ++++ + + + A DPLT LPN R L Q + + + Sbjct: 355 IWVIEDISARKAVEDEVNRLAFYDPLTQLPNRRLLRDRLAQALAASARSGMHGALIFIDL 414 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------P 408 DN + ++ G ++ + + L ++E++ + +L G E ++++ Sbjct: 415 DNFKSLNDTLGHARGDQLLKLVGQRLTHCVRESDTVARLGGDEFVVIVQDLGARLDECAT 474 Query: 409 ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC-- 466 + EG + +++ LN + F +++++ LL + Q+ Sbjct: 475 QAEGVGEKILDALNQ-PYPLDGHVRHSTPSIGITLFADDRDSVDDLLKEADMAMYQAKTA 533 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILA 524 + + D+ + + Q + L +R ++ LL+ QP + G + +L Sbjct: 534 GRNTLRFFDADMQAMLVQ---RAALEEDMRESMRLSHFLLHYQPQVVGSGRITGAEVLLR 590 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPL 582 G++ P +F+PL NL VLE+ K LA D K SVN+ Sbjct: 591 WPHPLRGLVPPAEFIPLAEDTNLITALGHWVLETACKTLADWSAQDDMKHLSVSVNVSAR 650 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + ++ + +R P + LE+TE + E + + L G ++DDF Sbjct: 651 QFRQPHFVAEVMSILERTGADPHLLKLELTESLLVEDVEDIVAKMSALKSRGVGFSLDDF 710 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKRL D +KID FV+DI+T+ D I R + LA + L+V+AE VE Sbjct: 711 GTGYSSLAHLKRLPLDQLKIDQSFVRDILTDPNDLAIGRMVVALADSLGLTVIAEGVELA 770 Query: 703 QQQALLHKLGVQYLQGYLIGRPQP 726 Q+ LL ++G QGYL RP P Sbjct: 771 AQRELLAQIGCDAYQGYLFSRPLP 794 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 102/440 (23%), Positives = 183/440 (41%), Gaps = 16/440 (3%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + ++ + QA D LT LPN L G + Sbjct: 580 TTHHIAVINDVTALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVV 639 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G + + + L + ++ + + G E ++V++ E Sbjct: 640 FIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGDEFVIVMTDTVDEQS 699 Query: 414 LQ---HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 L V S + + T L +G F + + + L+ + ++ Sbjct: 700 LIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGR 759 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLK 527 + ++ ++ L +R AL + LL+ QP + E G + ++ Sbjct: 760 N-TFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGMEALVRWHD 818 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQ 586 + G++ P +F+P+ + L VL + + P R SVNL Q Sbjct: 819 PEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQ 878 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++IA ++++ + + PQ + LE+TE NAE ++ + +LH G +AIDDFGTGY Sbjct: 879 RDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGY 938 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKR D +KID FV DI ++ D I +I LA + +L V+AE VET Q Sbjct: 939 SSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLD 998 Query: 707 LLHKLGVQYLQGYLIGRPQP 726 L + +QGY +P P Sbjct: 999 FLKERACDEMQGYFFAKPLP 1018 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 100/440 (22%), Positives = 191/440 (43%), Gaps = 21/440 (4%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCC 354 + V + + A DPLT LPN R AL ++ + + Sbjct: 576 THFIANVEDINERKNAEATIEHLAYFDPLTDLPNRRMLQDRLELALRRSRRHGSNVALMY 635 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D+ + ++ G ++ + ++++++ + +L G E L+L + + Sbjct: 636 LDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDDVVCRLGGDEFALILHDIHQDQDV 695 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD---GNQETLQPLLGQLSWLAEQSCAH 468 + L ++ + + + + F G+ + L+ + A++ + Sbjct: 696 VPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDGGDVKNLEKHADIALYHAKEEGKN 755 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILAR 525 L E ++ + ++ L +R A ++ +L L+ QP + + G + +L Sbjct: 756 TFRFYL----EELNSTISTRIALEQGLRYAKERQELELHYQPKVCVASGKVSGVEALLRW 811 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLL 585 D G+++P +F+PL Q L VL + +VNL + L Sbjct: 812 HSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQWREQGLLLNMAVNLSAIQLK 871 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + R+ + I P+ + LE+TE +N + + +E+L G I+IDDFGTG Sbjct: 872 SPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQLLERLRTLGCSISIDDFGTG 931 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK I+KID FV+D+ N+ D I RS+ DLA + VAE VE+++Q Sbjct: 932 YSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVDLANNLDMKTVAEGVESEEQL 991 Query: 706 ALLHKLGVQYLQGYLIGRPQ 725 +L ++G Y+QG++ RP Sbjct: 992 TILQQIGCTYIQGFIYSRPV 1011 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 95/461 (20%), Positives = 186/461 (40%), Gaps = 20/461 (4%) Query: 283 QGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF----- 337 G S+ + + ++Y+ + + + QA D LT LPN Sbjct: 354 DGRLIPVSMIGFPIEIAGETQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFAD 413 Query: 338 ---RALEQAPEQ-EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 RAL +A + ++ + + ++ + ++ G + + R L ++ + + Sbjct: 414 RLERALTRARRRGDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTV 473 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E ++L +T+ + +V + + + + Sbjct: 474 ARLGGDEFAVILEEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPEASIGIVLHTRDYAA 533 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 LL ++ + + + + + + L +R AL+ G+LLL+ QP Sbjct: 534 ADDLLRDADIAMYRAKEQGRASMI--FDRKMHQEILEAISLETDLRQALEAGELLLHYQP 591 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 I + G++ ++ D G++ P +F+PL + L V++ + L Sbjct: 592 IVDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQ 651 Query: 568 CDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + SVN+ ++ + + ++ + P + LEITE +AE + Sbjct: 652 LEMPEAADLSVSVNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTA 711 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G +IAIDDFGTGY++ L++L D +KID F+ + IV+SI Sbjct: 712 RELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSII 771 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 LA++ L+V+AE VE Q L QG++ RP Sbjct: 772 SLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSRPV 812 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 111/446 (24%), Positives = 204/446 (45%), Gaps = 28/446 (6%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDN 359 + R + E +N QA +DPLT LPN R AL + + + +DN Sbjct: 261 LKRANAQLENMNDLLQSQATSDPLTGLPNRRFMLDRLKHALASSSRSGREGALLFIDLDN 320 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------PET 410 + ++ G + ++ + L ++E + + +L G E +++L +T Sbjct: 321 FKTLNDTLGHDVGDQLLQQVAHRLETCVREGDTVARLGGDEFVVMLEDLSEKDLEAAAQT 380 Query: 411 EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 E + ++ LN F+ +Q++L LL Q Q+ Sbjct: 381 EAVGEKILAALNQ-PYQLGKHEYRNTPSIGATLFNDHQQSLDELLKQADIAMYQAKRAGR 439 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-------KEGEGYDEIL 523 AL + + + L N +R AL+ L+ Q + G + ++ Sbjct: 440 N-ALRFFDPQMQETINSRATLENELRKALELHQFYLFYQVQVDSVQEDGSHRATGAEALI 498 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSVNLMP 581 + G+++P +F+PL + L L VL++ L T D +G +VN+ Sbjct: 499 RWAHPERGLVSPAQFIPLAEETGLIVPIGLWVLDTACAQLKTWQHDALTRGLVLAVNVSA 558 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q + ++ +R+ I P+ + LE+TE N + ++ + L + G R ++DD Sbjct: 559 KQFRQPDFVAQVDAAVQRHGIDPKLLKLELTESLLLENIQDTIATMNALREIGIRFSLDD 618 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ + LK+L D +KID F+ D+V+++ D IVR+I +A++ +L+V+AE VET Sbjct: 619 FGTGYSSLQYLKQLPLDQLKIDQSFICDLVSDSSDRAIVRTIIAMAQSLNLNVIAEGVET 678 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPL 727 + Q+ +L + G + QGYL +P P+ Sbjct: 679 EAQRQILLEKGCIHHQGYLFSKPVPI 704 >UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C6M6_ACAM1 Length = 935 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 112/439 (25%), Positives = 203/439 (46%), Gaps = 19/439 (4%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 + R + L+++ QA D LT L N R E + C L +D Sbjct: 495 GIGRDITEAHSLSQQLTHQATHDSLTGLVNRREFEHQLGQIIEEKQSNPIQHALCFLDLD 554 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR---LQ 415 + ++ G + ++ + L +++ + L +L G E L+L E + Sbjct: 555 QFKIVNDTVGHLAGDALLKQVADLLQAHIRQTDILSRLGGDEFGLLLKNCSLEKARIVTE 614 Query: 416 HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCAHHHVLA 473 ++++ L+ + W +G + + L L + + + + V Sbjct: 615 NLISELSQFRFIWEGQLFKIGASIGIVPITADTDNLTLLFAKADVACYSAKDRGRNRVHL 674 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG-----YDEILARLKY 528 ++ + V+ Q ++ + + TIR AL++ LY QPI + E Y+ +L Sbjct: 675 YHAQAQGVTEQHSELMQ-VATIRKALEESRFRLYYQPIVPLDTETKIPVCYEILLRLQDT 733 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 DG I++P+ FLP ++ L D V+E++L + ++ R S+NL +L Sbjct: 734 DGKILSPNSFLPAAERYGLMLEIDKWVIENVLIKYGAYFQSQENTRISINLSGSSLDDDA 793 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + + P + EITE A SN + ++ IE++ +FG A+DDFG+G+++ Sbjct: 794 LLDFIQTQLNKTQLEPHKICFEITETVAISNFKQAIQCIEKIKEFGCHFALDDFGSGFSS 853 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 + LKR D +KIDG V+D+V + ++V +I + +A + +AEFVE L Sbjct: 854 FSYLKRFPIDYLKIDGSLVRDMVEDATHQVMVSAINQICRAMHIKTIAEFVENGDTIVAL 913 Query: 709 HKLGVQYLQGYLIGRPQPL 727 ++GV YLQGY +G+PQPL Sbjct: 914 EQIGVDYLQGYAMGKPQPL 932 >UniRef50_A3JAM8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAM8_9ALTE Length = 756 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 106/448 (23%), Positives = 195/448 (43%), Gaps = 21/448 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 + + +VR + + A DPLT LPN R L+ Q + Sbjct: 300 DIDFVVIVRDITQRKKREDEIRQLAYYDPLTRLPNRRLLKDRLQQVIANCGRQSRYAALF 359 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +DN + ++ G + + L+ ++ + + +L G E ++++ G ++ Sbjct: 360 FLDLDNFKNLNDSLGRTKGDLLLCQVAARLIESVRHGDTVSRLGGDEFVVLIEGLSSDRN 419 Query: 414 LQHM--------VNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + +N+ +++ + + + F+ N +L+ LL Q ++ Sbjct: 420 EAAVQVEAAAGKINVQLTQKFDLDGSPYNGSASIGVTTFNSNDSSLEDLLKQADMALYKA 479 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEIL 523 A H ++ + + + + + + AL + L+ Q ++ G + +L Sbjct: 480 KAADHS-SVHFFDPQMQVVASLRAAMQQDLYEALRKNQFQLHYQKQIDQHEGLIGVEALL 538 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMP 581 G ++P +F+PL + L VL + LA D K +VN+ Sbjct: 539 RWAHPTKGFISPAQFIPLAEETGLIVPIGEWVLREACQTLAQWASDPAKANLTIAVNISV 598 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 + +K+I ++ P + LEITE S+ E+ + +L + G +IDD Sbjct: 599 VQFNKKDIVHTVLNALNASGAKPHNLKLEITESLLASDVENVKVKMLELQRHGVTFSIDD 658 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LK+L +KID FV+DI+ + D I +++ LA A L+V+AE VET Sbjct: 659 FGTGYSSLFYLKQLPLHQLKIDQSFVRDIINSPNDQAIAQAVITLAIAMHLNVIAEGVET 718 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + Q+A+L LG QGYL G+P L D Sbjct: 719 EAQRAMLQDLGCGAYQGYLFGKPCALQD 746 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 107/465 (23%), Positives = 193/465 (41%), Gaps = 28/465 (6%) Query: 289 YSLAFILAVLISFSV--CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR-------- 338 L F+L L SF + + + H A DPLT L N + Sbjct: 119 VPLEFVLQYL-SFGEDDYFVILGKDISERRHAESTIHTLAFFDPLTHLANRQLLHDRMAQ 177 Query: 339 ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 AL ++ + + +DN + ++ G + + + + + +++E + L ++ G Sbjct: 178 ALAKSQRHHKVGALLMIDLDNFKALNDTKGHHIGDELLIQVAQRIQTIVREGDTLARISG 237 Query: 399 SELLLVLSG--------PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 E +++L G + + V L + F+G ++ Sbjct: 238 DEFVVLLEGLAHEESKAAQEAEKFATRVKYLLNEPYELLGYEHTCSSSIGIALFNGQPKS 297 Query: 451 LQPLLGQLS--WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + LL Q + + + D ++ + + + +R AL + +L+L+ Sbjct: 298 KETLLKQADIAMYQAKEKGRNRICFYD---PLMQENIEHKTTMEHELRMALSKEELILFY 354 Query: 509 QPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 QP N EG+ G + +L G++ P+ F+PL + L VL + L+ Sbjct: 355 QPQVNLEGKIVGVEALLRWNHPQKGLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEW 414 Query: 567 PCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 D + S+N+ + + + ++ LE+TE + ++ Sbjct: 415 KKDFPHQPLHLSINVSAKQFQEASFYETVANAIALSGSDAGSIKLELTESLILDSIHETI 474 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 IE L G ++DDFGTGY++ LKRL D +KID FV+DI + DAMIV++I Sbjct: 475 AKIEALRLLGVGFSLDDFGTGYSSLSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTII 534 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++A L V+AE VE ++Q L + G QGYL G+P P + Sbjct: 535 EMAHNFDLDVIAEGVEDKEQFNFLMENGCGLFQGYLFGKPMPPEE 579 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 109/435 (25%), Positives = 185/435 (42%), Gaps = 23/435 (5%) Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHY 367 + A D LT LPN R L E + + +DN + ++ Sbjct: 567 KAAQEEIRHLAFYDALTGLPNRRLLHDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTL 626 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS--GPETEGRL-------QHMV 418 G M ++ + + L ++E + + +L G E +++L G E + ++ Sbjct: 627 GHDMGDRLLQQVGQRLSSSVREGDTVARLGGDEFVVMLENLGERPEEAAGQSRIVGEKII 686 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 +LN R + F G Q + L+ + ++ A AL + Sbjct: 687 KLLN-RPYDLSGHDYHNTPSVGITLFGGQQVGIDELMKRADLAMYEAKASGRN-ALRFFD 744 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPD 536 + T + + +R A+ + L QP + G+ G + +L G ++P Sbjct: 745 PRMQAVVTARADIEKDLRAAVGRQSFFLAYQPQVDASGQVIGAEALLRWQHQQRGTVSPA 804 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRII 594 +F+P+ + L L VLE+ A ++ SVN+ Q N +++ Sbjct: 805 EFIPVAEETGLILPLGLWVLETACAQAALWAARPGRERFTVSVNVSARQFRQANFVDQVL 864 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + R P+ + LE+TE N + + + L G ++DDFGTGY++ LK+ Sbjct: 865 AVLARSGAHPRNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQ 924 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L D +KID FV+D++T+ D +I R+I LA+ LSV+AE VE+ +QQ L G Sbjct: 925 LPLDQLKIDQSFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQGCL 984 Query: 715 YLQGYLIGRPQPLAD 729 QGYL RP LAD Sbjct: 985 AYQGYLFSRPLALAD 999 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 108/462 (23%), Positives = 187/462 (40%), Gaps = 27/462 (5%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALE 341 ++ + L +L + R + + A D LT LPN R ++ Sbjct: 384 TIKTPIRDLHGRVTGVLGVCRDITERKRAAQEIERLAFYDALTGLPNRRLLLDRLQRSIA 443 Query: 342 QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + + +DN + ++ G M + + L+ ++ + + + G E Sbjct: 444 TCQRTHKLGALLFIDLDNFKDLNDTLGHDMGDQLLAQVATRLVASVRAADTVARFGGDEF 503 Query: 402 LLVLSG---------PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 +++L + E ++ LN + F + ++ Sbjct: 504 VVMLEALAPDLRTATAQAEMVADKLLASLNQ-PFALDGGQHYSTLSIGVTLFGEQRLSVD 562 Query: 453 PLLGQLSW--LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 LL + ++ + D + + L +R L + +LL+Y QP Sbjct: 563 ELLKRADLALYQAKAAGRNTQRFFDPD---MQAAVNARSNLEADLRQGLARAELLVYYQP 619 Query: 511 IRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + + + G + ++ G++ P F+PL Q L VL++ L Sbjct: 620 VVDHQARLMGAEALVRWRHPQRGMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQ 679 Query: 569 --DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 D G SVN+ Q +++ K + P+ + LE+TE + E ++ Sbjct: 680 HPDTAGLSISVNVSARQFRQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIAR 739 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + QL G A+DDFGTGY++ LKRL D IKID FV++++ + DA IVR+I L Sbjct: 740 MAQLKSEGVGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILAL 799 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AK+ L VVAE VET Q + L G + QGYL GRP P+ Sbjct: 800 AKSLDLQVVAEGVETTGQLSFLQLHGCEGFQGYLFGRPVPME 841 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 184/442 (41%), Gaps = 26/442 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + + QA D LT LPN R L E + L +D + Sbjct: 361 DITEKKQKDELIFWQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGALMFLDLDKFKT 420 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHM 417 ++ G + + R + ++E + + ++ G E +++L + H+ Sbjct: 421 LNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVVLLENLGADIKDATQAAAHI 480 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC--AHHHVL 472 + S ++ N E+ + L+ Q Q+ + V Sbjct: 481 AEKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAMYQAKEAGRNAVR 540 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDG 530 D + + L + +R A+ + L L+ Q + G + +L + Sbjct: 541 FFDPQ---MQQSVETIAALESDLRHAVHERQLQLFYQIQLDHTHHPVGAEALLRWIHPVR 597 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKN 588 G+++P +F+P + +L VL+ + +A ++ +VN+ Q + Sbjct: 598 GMVSPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTRDLVLAVNISARQFKQPD 657 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK-FGFRIAIDDFGTGYA 647 ++ + +++ I P + LE+TE A + + + L G +++DDFGTGY+ Sbjct: 658 FVEQVGAMIRKHAIQPARLKLELTESIALEELDVIITKMHALRNGLGISLSLDDFGTGYS 717 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL D IKID FV+D+ ++ DA++V++I D+A + V+AE VET Q L Sbjct: 718 SLSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEGVETAGQFFL 777 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + G QGYL GRP PL + Sbjct: 778 LKQYGCLLFQGYLFGRPVPLRE 799 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 98/446 (21%), Positives = 186/446 (41%), Gaps = 21/446 (4%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFC 353 + ++ + + R+ QA D LT LPN + + + Sbjct: 804 TNIFWIYQDISERKEFERQITHQAFHDSLTGLPNRSLFRERLGRAVERTKRRPDYHFAAM 863 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + ++ ++++ G + I L ++ + + +L G E ++L T Sbjct: 864 LIDLNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGDEFAILLEEFRTNKE 923 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + R WN + G + + +L ++ Sbjct: 924 VISVASRIQNEVRRAFLWNGKEIVSGASVGIVLQTRDCAGAEDILRDADIAMYKAKERGR 983 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLK 527 + + + + + + N +R A++ L L+ QPI + +G EG++ ++ Sbjct: 984 GHLV--FHNRMRQEVLEVINMENELRRAIEGNSLELHYQPIFDVDGGKLEGFEALVRWRH 1041 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD----KKGPRFSVNLMPLT 583 + G++ PD+F+PL + L V+ + + L + + + G SVNL Sbjct: 1042 PEHGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLTMSVNLSCKQ 1101 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q + I+R + I+P + LEITE + ++ + +L + G +A+DDFG Sbjct: 1102 FAQHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLKEIGVLLAVDDFG 1161 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L++ DI+KID F+ T +A IVRSI D+A + L V AE VETQ+ Sbjct: 1162 TGYSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRVTAEGVETQE 1221 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + QGY+ +P D Sbjct: 1222 QLERLQSINCDRAQGYMFSKPMAPGD 1247 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 101/490 (20%), Positives = 196/490 (40%), Gaps = 17/490 (3%) Query: 256 GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS---VCLLYMVRIY 312 G++ + ++ A+S N + + S+ LA + + S + ++ Sbjct: 198 GEVCNGYTDICQAISRGTEGYTVLNLERENGAQQSVELFLAPVENESGDVTHFIGVLNDV 257 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK------SFCCLRIDNLEFMSRH 366 +R QA D LT LPN L + + L +D + ++ Sbjct: 258 TARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGRLTAVMFLDLDRFKLVNDS 317 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 YG + IR + + ++ + + +L G E +++L + + L R Sbjct: 318 YGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLS 377 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + L + + + LL ++ + Sbjct: 378 ESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRN-NYCFYGPEMDH 436 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLP 540 +++ + + +R AL G+L + QP + G + ++ + ++ P +F+ Sbjct: 437 HARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIA 496 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + L QVL + + + + +VNL Q ++ ++ + Sbjct: 497 VAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAE 556 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + LEITE A ++A+ S+ + L + G +AIDDFGTGY++ LKR D Sbjct: 557 TGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDT 616 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F++ I + D IV++I +A++ LS++AE VET Q+ L G + QG+ Sbjct: 617 LKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGF 676 Query: 720 LIGRPQPLAD 729 L GR P D Sbjct: 677 LFGRAMPAED 686 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 101/445 (22%), Positives = 180/445 (40%), Gaps = 21/445 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFC 353 + + + + + A D LT LPN + QA + Sbjct: 1057 TSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALL 1116 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G + +++ + L ++E + + +L G E ++L G Sbjct: 1117 FLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVAKTKA 1176 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG--QLSWLAEQSCAH 468 + + + L + + + + L+ + +S Sbjct: 1177 ATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGR 1236 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILAR 525 ++ ++ T+ VLL ++ A+ + +L L QP +R+ G + +L Sbjct: 1237 NN---FQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALLRW 1293 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 + G ++P +F+PL + + + V+ + LA +VNL L Sbjct: 1294 HHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSARQL 1353 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 +I I + Q++ LE+TE N + S+ + +L G IAIDDFGT Sbjct: 1354 K-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGT 1412 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKR D +KID FV+DI + DA I +I LA + L+VVAE VETQ Q Sbjct: 1413 GYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQ 1472 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L G +QG+L+ +P D Sbjct: 1473 LNFLGLQGCDEVQGFLLSKPLSAKD 1497 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 496 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 93/441 (21%), Positives = 178/441 (40%), Gaps = 15/441 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 V + + R + H A D LT LPN L + S Sbjct: 472 VNYISIARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIF 531 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL--SGPETEG 412 L +D ++++ G + ++S+ + ++E + + +L G E +++L +G Sbjct: 532 LDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLREAGESAAS 591 Query: 413 RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + I + + + + + L+ ++ Sbjct: 592 VVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRN- 650 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 ++ + + +R AL++G+L L QP + G + ++ Sbjct: 651 NFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPV 710 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKN 588 G ++P +F+P+ + VL + +A +VNL L Q + Sbjct: 711 KGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPD 770 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +A I + + + + LEITE + +++ + ++ G +++IDDFGTG+++ Sbjct: 771 LAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSS 830 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK++ + +KID F++DI T+ DA I+RSI L +L V+AE VETQ+Q L Sbjct: 831 LNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFL 890 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 G +QGY RP D Sbjct: 891 RIRGCDEIQGYFYSRPLLAED 911 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 106/444 (23%), Positives = 191/444 (43%), Gaps = 21/444 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLR 356 + + + + + + AL DPLT LPN R AL A G + L Sbjct: 802 YISIRTDITQRKAAEDKSNYLALYDPLTNLPNRRLLLDRLTHALASAMRTGRGGALLFLD 861 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---PETEGR 413 +D+ + ++ G + ++ + L ++E + + +L G E +++L G E E Sbjct: 862 LDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVARLGGDEFVVILEGLSEQEVEAA 921 Query: 414 LQHMV---NILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 Q V ILN + + F N LL Q Q+ Sbjct: 922 AQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKNNLKSDELLKQADIAMYQAKKL 981 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARL 526 AL + + +V + + +R ALD+ + L+ Q + G + ++ + Sbjct: 982 GRN-ALSFFDPKMQEGIQARVDMEHELRKALDKNEFQLFYQMQVGLSDRAVGAEALIRWI 1040 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTL 584 + G++ P++F+ + + V+++ L ++ SVN+ Sbjct: 1041 HPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLKRWEQSERTRSLTLSVNVSAKQF 1100 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 Q + ++ R+ I+P + LE+TE + E ++ + L G R ++DDFGT Sbjct: 1101 RQADFVEQVTTAIARHGINPMLLKLELTESALLDHIEDAVAIMNALKDIGIRFSLDDFGT 1160 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ + L+ L +KID FV+DI ++ + IVR+I +A +L+V+AE VETQ Q Sbjct: 1161 GYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQ 1220 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 Q +L G + QGYL P P+ Sbjct: 1221 QGILLDSGCMHYQGYLFSEPVPID 1244 >UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3I9_9PROT Length = 1123 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 107/440 (24%), Positives = 202/440 (45%), Gaps = 16/440 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCL 355 + +++ + + L + +D LT LPN R A A ++ S L Sbjct: 674 AVQLLIQDISSRKEAQEQLRLLSYSDELTGLPNRRLYSDRVEQACSMARRRKRPISLLFL 733 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G ++++ LL ++ ++ ++ G E ++L E + L+ Sbjct: 734 DLDRFKLINDTRGHACGDMVLKTVANRLLQTLRVSDTAARMGGDEFAVLLPETEPDKALR 793 Query: 416 HMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 ++ + + I N L +G F + E + LL + + L Sbjct: 794 VAGKLIAALNQPILIGNQELIIGASIGLASFPADGEDGETLLKHADSAMYYAKQNR--LN 851 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + ++ +++ L +++R A G L L+ Q + G + ++ + Sbjct: 852 IHCFSSVMEAVAQRRMQLEDSLRLAAGSGQLSLHYQSQHSLAEGTITGMESLMRWHHPEL 911 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G ++P +F+PL + L + + + R S+N+ L+Q+N+ Sbjct: 912 GNISPGEFIPLAEETGLIRSITAWAITEASRQALVWEEAGIRPERISINISAAELMQQNL 971 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 A I+ L + P+ + +EITE A + E+ + + +L + G IAIDDFGTGY++ Sbjct: 972 ASEILTLIRGSGAKPEWIEIEITETAAMNQPETGIGIMRELVEGGVSIAIDDFGTGYSSL 1031 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK+L AD +KID F++++ + DA+IVR+I +A A ++VVAE VETQ Q L Sbjct: 1032 AYLKQLPADHLKIDIAFIRNLPDDAEDAVIVRTIIAMAHALGMTVVAEGVETQAQLDFLR 1091 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 + G +QGYL+G+P P + Sbjct: 1092 QEGCDGIQGYLLGKPLPADE 1111 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 103/465 (22%), Positives = 189/465 (40%), Gaps = 15/465 (3%) Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 +++ L G ++ LA LL +VR + R A DPLT L Sbjct: 483 FDWHARRLDGSLFWVEVSMRLARFSDGQNRLLVVVRDITERKNAQDRLEFMAHHDPLTEL 542 Query: 335 PNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN RA+ A + + L +D + ++ G ++ + L Sbjct: 543 PNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQC 602 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 ++E++ + +L G E ++VL+ + + ++ + I + Sbjct: 603 VRESDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAM 662 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F + L+ + A ++ + L + + AL++G+ Sbjct: 663 FPEDGHDFDTLMKKAD-AAMYHAKESGRSTYRFFAARMNADAVAHLALRSGLHRALERGE 721 Query: 504 LLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LY QP + G G + ++ + G+++P +F+P+ L VL Sbjct: 722 FQLYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQAC 781 Query: 561 KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + A +VNL L + ++ + + ++P ++ LE+TE + Sbjct: 782 RQAALWQAGGHALTMAVNLSALQFRRGDLERAVREALEESGLAPHSLELELTESIMIQDH 841 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E+ M +L G +++IDDFGTGY++ LKR D +KID FV+D+ T+T +A I Sbjct: 842 EAVMDMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAIT 901 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 ++I +A + L V+AE VE + L G QG+L GRP Sbjct: 902 QAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQGFLYGRPM 946 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 109/447 (24%), Positives = 191/447 (42%), Gaps = 24/447 (5%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQE 347 AVL +V + ++ H+ + QA D LT LPN AL A Sbjct: 422 AVLAMMAVSISGAIQRQHK----EQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSG 477 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 S L +D + ++ G + ++++ L ++E + + + G E ++L Sbjct: 478 EKLSVLFLDLDRFKTINDTLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQ 537 Query: 408 PETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + S + H N L + +D + + L+ Q Sbjct: 538 IHQVNDVAKTAQRMLSALEQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQ 597 Query: 465 SC--AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 + + S +S +++ L ++R AL++ + LLY QP N + G Sbjct: 598 AKQLGRNTYQFFCSG---LSNGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGM 654 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + +L + G++ P F+ + + L VL + T P +VN Sbjct: 655 EALLRWKHPEMGLVIPQLFMSVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVN 714 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L Q ++ G I R+ + PQ + LEITE A + E + +++L G +I+ Sbjct: 715 LSARQFRQPDLTGMIARILDETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQIS 774 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L++ + +KID FV+D+ N+ DA IV ++ LA+ +L+VVAE Sbjct: 775 MDDFGTGYSSLAHLQQFPLNTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEG 834 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQ 725 VE +Q L L + QGY+ RP Sbjct: 835 VENDEQLNCLESLHCEEAQGYIFNRPL 861 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 102/428 (23%), Positives = 182/428 (42%), Gaps = 15/428 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFM 363 R A DPLTLLPN L+ A + + L +D + + Sbjct: 302 ITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTI 361 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV-NILN 422 + G ++ H ++ + + L ++E++ + + G E +++L ++ + H+ I+ Sbjct: 362 NDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIE 421 Query: 423 SRQ--IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + I N L++ + F + L+ +S A Sbjct: 422 AMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRN-QFQFFTAD 480 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKF 538 ++ +++ L N + A+++G+ L QP G G + +L G++TP +F Sbjct: 481 MNAHALERLALENDLHRAVERGEFRLMFQPQFEGSGSIIGAEALLRWQHPQRGLVTPAEF 540 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ + L VLE + + K SVN+ L QKN+ I RL Sbjct: 541 IPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLL 600 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 +I P + LE+TE + ++ + +L + G R+AIDDFGTGY++ L+ Sbjct: 601 AVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPI 660 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 +KID FV+D+ I +I LAK ++ V+AE VET QQ + L Q Sbjct: 661 SKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQ 720 Query: 718 GYLIGRPQ 725 G+ +P Sbjct: 721 GHFFSQPV 728 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 106/482 (21%), Positives = 203/482 (42%), Gaps = 28/482 (5%) Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-LLYMVRIYHRSEWLNRRWHLQALTDP 330 Y + G ++ L+ + + + R + R + A DP Sbjct: 376 FSEGKYYALEMPGGRRDFELSVASKAGKEKGIQRYVMLSRDITERKENEARINNLAFFDP 435 Query: 331 LTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN R L+ E Q A + + +D+ + ++ + G + + ++ Sbjct: 436 LTQLPNRRLLQDRLEHAIATGQRQAALGALLYIDLDDFKTLNDNRGHHVGDLLLIAVADR 495 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRL---------QHMVNILNSRQIHWNNTGL 433 L ++ + + +L G E L++L G + + ++ LN + Sbjct: 496 LRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQAAQQVQQIAEKILQSLNQVYVLDEQEYF 555 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCAHHHVLALDSREEMVSGQTTKQVLL 491 + F + ++ LL + ++ + + D + ++ L Sbjct: 556 N-SPSIGICLFGDDDADIEDLLKRADQAMYHAKAAGRNTLRFFDPH---MQASAAQRFAL 611 Query: 492 LNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 N IR AL LY QP ++ G G + ++ L + G+++P F+P+ + L Sbjct: 612 QNEIREALLFNQFKLYYQPQVDRTGRITGAEALIRWLHPERGMISPMDFIPIAEESGLIL 671 Query: 550 RFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAV 607 +L++ + L + S+N+ Q + +++ R +P + Sbjct: 672 PLGNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQQPDFVTQVLAAVTRTGANPHQL 731 Query: 608 ILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFV 667 LE+TE +N + + ++ L G + ++DDFGTGY++ LKRL + +KID FV Sbjct: 732 TLELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLPINELKIDKSFV 791 Query: 668 KDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 DI+T+ DA I R + LA++ L+V+AE VETQ+Q+ L + G + QGY G+P Sbjct: 792 NDILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQGYYFGKPVGA 851 Query: 728 AD 729 + Sbjct: 852 EE 853 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 95/429 (22%), Positives = 177/429 (41%), Gaps = 16/429 (3%) Query: 315 SEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRH 366 + R A DPLT LPN +A+E A +D + ++ Sbjct: 576 RKTTEERLTYLAQFDPLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFADLDRFKIVNDT 635 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR-- 424 G + + + L ++ + + +L G E L+LS + + S Sbjct: 636 MGHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDATLIAEKVISALQ 695 Query: 425 -QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + + + G+ LL Q+ + ++ Sbjct: 696 VPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQGPAI-YQFYLPQMNE 754 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 + ++ + +R AL + + +L+ QP + N E G++ +L G++ P +F+ Sbjct: 755 RAVARLKIETQLRGALARREFVLHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFIS 814 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKR 599 ++ L V++++ + + ++NL Q+++ I + Sbjct: 815 VLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETLRA 874 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 +I P+ + E+TE AE + ++ L FG +I++DDFGTGY++ LKR D+ Sbjct: 875 TNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLDV 934 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID F++D+ T+ DA I ++ LA + L VVAE VET+ Q L + G +QGY Sbjct: 935 LKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGY 994 Query: 720 LIGRPQPLA 728 +P PL Sbjct: 995 YFSQPLPLE 1003 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 91/441 (20%), Positives = 170/441 (38%), Gaps = 16/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + + Y + + R A D LT L N AL+ + + + Sbjct: 649 VIALQIAQYKQRKQAERSLRFMASHDGLTGLFNRAALQHELARAIKRSNRHQKQFAVIFV 708 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + I+ L L++E + + + G E +L+L + Sbjct: 709 DLDRFKHINDTLGHGVGDEMIKICGERLTALLREADVVARFGGDEFVLLLENLSSANDAA 768 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + L + + N + LL ++ Sbjct: 769 GLAEKVLACCAEPFFLAGRELHVSASVGVSIYPDNGADAEALLKNADTAMYRAKERGRN- 827 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYD 529 ++ Q T+Q++L + +R AL++G+L ++ QP + + + G + ++ Sbjct: 828 TFRFYAAKMNAQNTEQLMLESALRHALERGELEMHYQPKMDLQTQRIVGVEALMRWHHPI 887 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKN 588 G++ P +F+P+ + L LE + SVNL P + Sbjct: 888 LGMIPPVQFIPIAEELGLIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQFESRT 947 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + + + P + LEITE +N E + + + G +AIDDFGTGY++ Sbjct: 948 LIADIQAVLEASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYSS 1007 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK +KID F+ D+ + ++ I LA + VVAE +ET Q L Sbjct: 1008 LSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQLDYL 1067 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 G QGY + +P P + Sbjct: 1068 RSHGCDEAQGYWLCKPVPADE 1088 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 181/442 (40%), Gaps = 17/442 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKS 351 + + + +R A D LT LPN AL+QA + Sbjct: 779 GTVTNYIALFTDISAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVA 838 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D+ + ++ G + + + L +++ + + +L G E +++L+ E Sbjct: 839 VIFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDS 898 Query: 412 GRLQHMVNI----LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 +++ ++ L + L F + LL A Sbjct: 899 HQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNAD-TAMYRAK 957 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILA 524 E ++ + +++ + ++R +++ +LLL+ QP + G + +L Sbjct: 958 EVGRNNYHFYTEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLR 1017 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLT 583 D G+++P +F+P+ + L QV+ + + L+ S+N+ + Sbjct: 1018 WQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQ 1077 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + +++L + +SP + LE+TE +A ++ +E L GF +IDDFG Sbjct: 1078 FRDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFG 1137 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L R D +KID F++ ++ D I+++I L + V+AE VE + Sbjct: 1138 TGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKED 1197 Query: 704 QQALLHKLGVQYLQGYLIGRPQ 725 + L G +QGY + RP Sbjct: 1198 EYRALRAAGCDGIQGYFVARPL 1219 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 94/442 (21%), Positives = 183/442 (41%), Gaps = 16/442 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------- 351 + ++ L +V+ + R A D LT LPN L EQ ++ Sbjct: 239 PNHAIILRGIVQDITERKMQQGRIEYLANHDALTGLPNRNLLSDRMEQAMSQARRTGQLV 298 Query: 352 -FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 L +D + ++ +G + +R + L +++ + + +L G E +++L T Sbjct: 299 AVMVLDLDRFKHINDSFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDEFVVMLVNLAT 358 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + L + + + LL A + Sbjct: 359 QADADVIARKILDTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTAD-AALYAAK 417 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 H + + +Q +L N + A+ +L LY QP + + G + ++ Sbjct: 418 EHGRNCYRFYTRELGARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGVEALIR 477 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 + G++ PD+F+P+ L VL + + P R +VNL Sbjct: 478 WRRPGIGVIPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPIRIAVNLSARQ 537 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q+++A + + ++P ++ LE+TE + + + + +L G +++DDFG Sbjct: 538 FRQQDVAAMVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFG 597 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK L D++KID F+ D+ T+ A + RSI +A++ + VAE VET+ Sbjct: 598 TGYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEA 657 Query: 704 QQALLHKLGVQYLQGYLIGRPQ 725 Q + L++ +QGY P Sbjct: 658 QLSFLNRHRCHAMQGYYFSHPV 679 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 99/468 (21%), Positives = 193/468 (41%), Gaps = 24/468 (5%) Query: 281 FLQGVETEYSLAFILAVLISFSVCLLY-MVRIYHRSEWLNRRW-------HLQALTDPLT 332 +++ ++ L ++ ++Y +VR + + H QA D LT Sbjct: 334 YIRADGEKFLAEVTLTPIMLGKRHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALT 393 Query: 333 LLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN E + + +DN + ++ G + + + + L Sbjct: 394 GLPNRTLFSDRLEHGLKLAERHLGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLK 453 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAW 441 +++ + L +L G E +++ + ++ + + + +H L + Sbjct: 454 AKIRQEDTLARLGGDEFTIIMENFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGI 513 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + + L+ ++ ++ ++V++ ++R A+ Sbjct: 514 SFYPQDTQNANDLVKYADAAMYKAKEEGRN-NFQFYSTEMTTLAYERVVMEASLRQAIKN 572 Query: 502 GDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + +LY QP N + G + ++ G++ PDKF+PL + L D V+ + Sbjct: 573 EEFILYYQPQVNAQTSRMTGMEALIRWEHPHLGMILPDKFIPLAEESGLILEIDRWVMRT 632 Query: 559 LLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 +K + P S+NL L +N I P+ + E+TE Q Sbjct: 633 AMKQVREWYARGLDPGVLSLNLSMRQLKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQMM 692 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 + ++ ++ ++ G IAIDDFGTGY++ LKRL +KID F+ I + +A Sbjct: 693 KRPDDAVASLGEIKSMGISIAIDDFGTGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENA 752 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 IV++ LAK+ SLS++AE VE ++Q+ L G +QGY GRP Sbjct: 753 AIVKATIALAKSLSLSIIAEGVENEEQKEFLLFNGCISMQGYYYGRPM 800 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 105/443 (23%), Positives = 183/443 (41%), Gaps = 24/443 (5%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 M+ I R E A D LT LPN L + + +DN Sbjct: 485 MMDISDRKE-AEEEIRRLAFFDGLTGLPNRTLLHDRLGQALANTARTRHHGAVLFIDLDN 543 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------PET 410 + ++ G + + + R + ++E + L +L G E +++L+ E Sbjct: 544 FKDINDTLGHAVGDDLLCQVARRMENSVREADTLARLGGDEFVIILNDLHPDPARAATEA 603 Query: 411 EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 E + ++N+L + F G ++ +L Q LA + Sbjct: 604 EAVGRKLINLLRE-PFQLAGQNRHVTPSIGATLFSGRSLGVEEVLKQAD-LAMYRAKNAG 661 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKY 528 + + + + L N +R ALD+ + QP + EG G + +L Sbjct: 662 RNTVRFYDPELHRAVEARFELENELRHALDEDRFSVVYQPQVDAEGRVIGAELLLRWEHA 721 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQ 586 G ++P +F+P+ Q L +VL + L + SVN+ Sbjct: 722 QRGAISPAEFIPVAEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRDLTLSVNISARQFRD 781 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + + + + LE+TE ++ + +I++L G A+DDFGTGY Sbjct: 782 PHFVPHLREILQETGAPGDRLKLELTESMLLEEIDTVVAHIDELRALGVEFALDDFGTGY 841 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+L +KID FV+D++ + DA I + + +LA+ L V+AE VET +Q+A Sbjct: 842 SSLAYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLDLDVIAEGVETVEQRA 901 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L LG ++ QG+L G P LAD Sbjct: 902 FLFGLGCRHFQGFLYGYPGDLAD 924 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 102/435 (23%), Positives = 182/435 (41%), Gaps = 16/435 (3%) Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLE 361 R + R A DPLT LPN +A+E A ++ + + +DN + Sbjct: 267 RDITQRREAEDRIKHLAHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFIDLDNFK 326 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + + L + ++ + +L G E ++V++G M + Sbjct: 327 RINDTLGHRIGDALLEQVAARLTENVPGSQVVGRLGGDEFIVVITGNRVSTTSAAMAERI 386 Query: 422 NS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 R + L G + + + + L+ + + + Sbjct: 387 LESLCRPYTVEDYQLHSGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGRN-TFEFFS 445 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG---YDEILARLKYDGGIMTP 535 + ++ +++ + N +R AL G L+ QP + + +L G++ P Sbjct: 446 QAINRGVRERLDIENGLRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPLLGVIAP 505 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 D+F+P+ + L L V++ L D G R +VN+ L ++ + Sbjct: 506 DRFIPIAEETKLILPLGLWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDESFFEALG 565 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 + +R+ +S + LEITE N ++ L +G ++IDDFGTGY++ RLK Sbjct: 566 SIVERHGLSGSDIELEITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYSSLGRLKL 625 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L +KID FV DI T+ +A I I L + L ++AE VET Q+ LL G Sbjct: 626 LPIQSLKIDRSFVHDIETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNLLQNSGCD 685 Query: 715 YLQGYLIGRPQPLAD 729 +QG+LI +P P D Sbjct: 686 AIQGFLIAKPLPADD 700 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 102/446 (22%), Positives = 184/446 (41%), Gaps = 17/446 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-------- 351 V + + R + R A D LT LPN + + + Sbjct: 358 GHLVNCIGIFSDISRLKATEERLEQLAFFDCLTKLPNRAHFQSRLDHALTAANRRQNKVG 417 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D+ + ++ G + + + ++E + + ++ G E ++L+ Sbjct: 418 LIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDTVARMGGDEFTIILADLTDT 477 Query: 412 GRL--QHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 ++ + IL S I + L +G + + L+ ++ Sbjct: 478 AKVMTNVALTILESFTHPIVLEDKKLFIGCSLGMAIYPDDSGNAALLIKHADTAMYRAKE 537 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 ++ Q ++ L + +R A+D LY QP + E G++ +L Sbjct: 538 SGRNR-YSFYTAEMNAQAQSRISLESELRYAIDHKAFELYYQPKVDAHSSEIVGFEALLR 596 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLT 583 + G+++P++F+P+ + L A QV+E + L + C K ++NL Sbjct: 597 WIHPTEGVISPNQFIPIAEESGLIAAIGNQVVEMACQGLQRINRCTPKPLPVAINLSVRQ 656 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L Q N+ + Y I + + LE+TE E S ++ LH+ G++IAIDDFG Sbjct: 657 LRQDNLVNYFSQTLANYGIEAEQLELEVTESFLAKPIEKSAALLQALHQLGYKIAIDDFG 716 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK +KID FV ++ N IV++I +A A +VAE VET Sbjct: 717 TGYSSLSYLKNFPIHTLKIDRSFVMEVAHNQESRTIVQAIISMAHALGYDLVAEGVETAA 776 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q +L LG +QG+ RP PL + Sbjct: 777 QVNVLQGLGCGIMQGFHYARPAPLHE 802 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 104/446 (23%), Positives = 194/446 (43%), Gaps = 20/446 (4%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAG 349 + ++ + + H+ E L D LT LPN AL A Sbjct: 501 IANYVAVFHDISDMKHKEEQLAHHL----YHDGLTGLPNRVLVLDRLSMALSHANRTGTK 556 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +DN + ++ +G ++++ L+ L ++ + + + G E L+V+ Sbjct: 557 VAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDTVARQGGDEFLVVVVDVH 616 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 E + + L + + + + + L+ QS Sbjct: 617 EEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDGQDPASLVKNADMAMYQSK 676 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEIL 523 A ++ +S + +++ L + +R AL + + +Y QP + E G + ++ Sbjct: 677 AKGRNSYFLFTQQ-MSERIAQRLTLESDMRRALKEREFTVYFQPKVDLASGEVSGLEALV 735 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPL 582 +K DG I++P+ F+P+ + L VL++ K + +VNL P+ Sbjct: 736 RWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVAVNLSPI 795 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q+++ ++ +R + + LEITE ++ +SS+ + +L + G I+IDDF Sbjct: 796 QFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSVAQLNRLVELGITISIDDF 855 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK +KID F++DI + DA IV ++ +A+ + VVAE VET+ Sbjct: 856 GTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVAEGVETK 915 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q LL G +QGY RP PL Sbjct: 916 EQLDLLATFGCATVQGYYYSRPLPLE 941 >UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTY7_THISH Length = 808 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 122/477 (25%), Positives = 211/477 (44%), Gaps = 21/477 (4%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWL---NRRWHLQALTD 329 + + + Y++ + L + V + H L R+ QA D Sbjct: 324 VVFSEESRLRRPDGESYAVRLTASPLRDGEDGISGAVLVLHDFSMLWDMARQLSHQARHD 383 Query: 330 PLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT L N R ALE A + C + +D + ++ G + +R + Sbjct: 384 ALTGLINRREFEDRVREALESARRSSRSHALCYIDLDQFKVVNDTCGHVAGDELLRQLAA 443 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRL---QHMVNILNSRQIHWNNTGLDMGYG 438 L +++ + L +L G E L+L + L ++ + + W D+G Sbjct: 444 ALPRHIRDTDTLARLGGDEFGLLLENCPLDRALSICHQLLAEVAELRFMWQGRRFDVGMS 503 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSC--AHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 DG +L +L + + + V ++ + + + + L IR Sbjct: 504 IGLVAIDGASASLSEVLSEADSACYVAKEQGRNRVYVSRPGDQALKTRFGE-MEWLGRIR 562 Query: 497 TALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGG-IMTPDKFLPLIAQFNLSARFDL 553 A+++ LY QPIR + EG + EIL RLK + G ++ P F+P ++NL + D Sbjct: 563 EAMEEERFELYCQPIRPISGEGVPHFEILLRLKAEDGSLVEPGAFIPAAERYNLMPQVDR 622 Query: 554 QVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 V+ S+ LA K+ +NL +L Q+++ + Y + EIT Sbjct: 623 HVIRSVFAMLADSDFALKQHAIVGINLSGQSLGQEDLLDFVTEALHYYGLPAHRFCFEIT 682 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E A +N S+ I +L G A+DDFG+G +++ LK + D +KIDG FV+D++T Sbjct: 683 ETAAIANLSSAAGFIRELRDMGCAFALDDFGSGLSSFNYLKHMPVDYLKIDGSFVQDVLT 742 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + +DA +V +I + + + +AEFVE++ L ++GV Y QGY IGRP+P D Sbjct: 743 DPVDAAMVGAIHRIGRVLGVKTIAEFVESEAVLEHLREIGVDYAQGYGIGRPKPFRD 799 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 98/437 (22%), Positives = 184/437 (42%), Gaps = 21/437 (4%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFM 363 L + A D LT LPN R L Q + + +D+ + + Sbjct: 144 SKEKAKLAEELNDLAFYDTLTGLPNRRLLIDRLHHALASNVRQGCESAVMFIDLDHFKDI 203 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-----PETEGRLQHMV 418 + G + + + L +++ + + +L G E +L+L E + + + Sbjct: 204 NDTLGHEVGDLLLIQTAQRLESCLRKGDTVARLGGDEFMLILENLDENPIEAATKAKAIA 263 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + + + + FD T + L+ Q Q+ L + Sbjct: 264 DKILAELNKPYQLDMHKCHSTVSIGAVFFDHQGNTAEDLIKQADIAMYQAKQAGGNL-IR 322 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIM 533 + ++ L N +R A+++ LY Q + + G + ++ + G++ Sbjct: 323 FFNPKMQESINARITLENELRIAIEKSQFHLYYQIQMDSDNRVLGAEALIRWTNPEHGLV 382 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAG 591 P F+P+ + L V+E+ + + +VN+ QK+ Sbjct: 383 LPATFIPIAEETGLILSIGKWVIETACAQIKVWQKKSQTRDLTLAVNVSAKQFRQKDFVD 442 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ +R+ I + LE+TE + E ++ ++ L+K G + ++DDFGTGY++ + Sbjct: 443 QVQSAVQRHAIPGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSSLQY 502 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL D KID FV+DI T+ D IV++I +A+ + V+AE VET++QQ LL Sbjct: 503 LKRLPLDQFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLLLGK 562 Query: 712 GVQYLQGYLIGRPQPLA 728 G QGYL +P P+ Sbjct: 563 GCTLYQGYLFSKPIPID 579 >UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nostocaceae RepID=B2J5P2_NOSP7 Length = 1224 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 126/507 (24%), Positives = 222/507 (43%), Gaps = 24/507 (4%) Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF 301 L VF I+ K++ P + L N+ + G + E ++ A + + Sbjct: 718 LLEEVFRIVHETTREKVKNPIEQALQENRIVSLANHT-VLITGRDQEIAIQDSAAPIRNR 776 Query: 302 SVCLLYMVRIYH---RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS------- 351 ++ V ++H ++ L+R+ QA D LT L N + E+ EQ + Sbjct: 777 EGQVIGAVMVFHDVTQNRLLSRQLSWQATHDALTGLVNRQEFERRVEQALHVAKLDYQVY 836 Query: 352 -FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 C L +D+ + ++ G + +R I L +++ + L + G E L+L+ Sbjct: 837 TLCYLDLDHFKIVNDTCGHVAGDELLRQITVLLQEKVRKTDTLARFGGDEFGLLLTQCTL 896 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL--GQLSWLAEQS 465 E L+ N+L + W +G D N E+L ++ + ++ Sbjct: 897 EEALRVANNLLSCVQEFRFVWQEQVFSIGVSIGLVVIDTNSESLAEIISTADAACYTAKN 956 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-----NKEGEGYD 520 + V + ++ Q Q+ + I AL+ LY Q I ++ G+ Y+ Sbjct: 957 RGRNRVYVAQTDDQERLQQ-RGQMQWVGRISQALESDWFCLYVQRIAAIIPTDQNGDHYE 1015 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLM 580 +L G ++ P F+P ++NL D V+ +L K + +K+ ++NL Sbjct: 1016 VLLRLRDEQGKLVLPMAFIPAAERYNLMHLIDRWVIRTLFKNWSRVVDNKQSIY-AINLS 1074 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 ++ + F + ISPQ + EITE A +N + I++L + G R A+D Sbjct: 1075 GSSINDDRFIDFLHEQFTLHPISPQHICFEITETVAIANLLKARQFIQKLQRMGCRFALD 1134 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFG G +++ LK L D +KIDG F+++IV N +D IV +IT ++ + +AEFVE Sbjct: 1135 DFGAGMSSFAYLKSLPIDYLKIDGSFIRNIVENPVDNAIVTAITRISSVMGIQTIAEFVE 1194 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPL 727 + LG+ Y QGY I P PL Sbjct: 1195 NDAILERITALGIDYAQGYGIAVPHPL 1221 >UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Photobacterium profundum RepID=Q1YXX2_PHOPR Length = 725 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 109/455 (23%), Positives = 196/455 (43%), Gaps = 16/455 (3%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--- 346 S+ L + L ++ + A D LT L N R L + EQ Sbjct: 263 SITIALFGSWAMWFVLRQPEKLQKIVKQKTHELEKFAFYDYLTGLANRRLLNEHLEQVIQ 322 Query: 347 -----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 + C +D+ + ++ G + ++ I L ++ +N+ + +L G E Sbjct: 323 QTECCGNSAALLCFDLDDFKRINDSQGHDIGDCVLQQISHRLNSVVNKNDIVARLGGDEF 382 Query: 402 LLVLS---GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 ++LS GR+ + + S I NN L + + + LL Sbjct: 383 TVLLSASYSASDAGRIAGQLIEVISEPIFLNNKELSVSASVGITMIPSDGNDVSTLLRNA 442 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KE 515 + + + + +V + ++ TA+ + +L+ QP+ N + Sbjct: 443 DMAMYSAKKSGK-RNYHFFNKALQKKALDKVSIEESLDTAISKKQFVLHYQPVFNFYSNK 501 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPR 574 Y+ ++ G++ P++F+ + + V++ + + H K R Sbjct: 502 LCCYEALIRWNHPREGLLYPERFIGIAEESGKIKNIGYWVIQEVCNVIKMHQLHIGKRHR 561 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VNL P ++ I R+ + I + + +EITE N ES++Y + Q + G Sbjct: 562 IAVNLSPRQFNDPDLLENIRRIIRNVGIDARFLEIEITESTLMENVESAIYTLRQFKELG 621 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +AIDDFGTGY++ LKRL D +KID FVKD+ +N D IV+++ +A +SV Sbjct: 622 ITVAIDDFGTGYSSLAMLKRLPVDKLKIDRSFVKDLDSNNSDQKIVQALISMAHTLQISV 681 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE +ETQ+Q LL + G + QGYL RP P+ + Sbjct: 682 IAEGIETQEQFNLLQQYGCDFGQGYLFSRPVPITE 716 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 90/433 (20%), Positives = 169/433 (39%), Gaps = 16/433 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEF 362 + + A DPLT L N +L+ A ++ + L +D + Sbjct: 769 DITERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKS 828 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + + R L +++++ + +L G E ++VL+ + + L Sbjct: 829 INDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLL 888 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + L + + + L+ + + + Sbjct: 889 GALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRD-NVQFFTP 947 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPD 536 ++ K++ + +R A++ G L+ QP N + ++ G+++P Sbjct: 948 EMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPA 1007 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ + L VL + L +VNL L + + R Sbjct: 1008 EFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVAR 1067 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + LEITE A + +S+ ++ L G ++IDDFGTGY++ LK L Sbjct: 1068 TLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLL 1127 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +K+D FV +I N D I + LA + L VVAE +ET+ Q+ LL + Sbjct: 1128 PIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDF 1187 Query: 716 LQGYLIGRPQPLA 728 +QGYL P P Sbjct: 1188 MQGYLFSAPLPAE 1200 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 101/440 (22%), Positives = 181/440 (41%), Gaps = 21/440 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRI 357 + + R R A DPLT LPN R + Q + + L + Sbjct: 536 ITLFRDISLQREAQERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQARGGQLALLFLDL 595 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + ++ R L L+ + + +L G E LL+L + Sbjct: 596 DHFKNVNDSLGHRIGDILLVAVARRLQSLIGPQDTVSRLGGDEFLLLLPATSAAHAAKVA 655 Query: 418 VNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPL---LGQLSWLAEQSCAHHHVL 472 +L + + + L + E+ L + A+QS + + Sbjct: 656 SALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGRNRYGF 715 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + +T + + + N +R AL++ L+ QP + + G + +L + Sbjct: 716 FTAD----LQARTARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPE 771 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKN 588 G++ P +F+P+ VL + + + R SVNL + Sbjct: 772 LGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQ 831 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + R ++ + + + LE+TE A + +++ ++QLH G R+++DDFGTGY++ Sbjct: 832 LPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSS 891 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR Q +KID FV+D+ + D IV +I +A+A + AE VET Q L Sbjct: 892 LSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFL 951 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 G QGYL RP P Sbjct: 952 RAQGCDEGQGYLFSRPLPAD 971 >UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8Z9_METSD Length = 828 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 109/439 (24%), Positives = 187/439 (42%), Gaps = 18/439 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRI 357 + + + +R A D LT LPN Q + + G + + Sbjct: 385 MTVASDVTENSRYRKRIEQLAYHDILTELPNRLLFNQQLQILIEQTPINKHGFCLLFIDL 444 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP----ETEGR 413 DN + ++ G + + + R + L+ +++ L ++ G E + L + Sbjct: 445 DNFKTINDTLGHSVGDKLLIEVSRRIRQLLGKDDMLARMGGDEFAISLPHCLSRLDAALL 504 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 +++ LN ++ + + + L LL + Sbjct: 505 AARIIDALN-VPFEVSSIKFFVSASMGIAFYPEDSSHLDDLLKHADLAMYHAKRQGRN-N 562 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 + ++ +++L+ N +R AL +G+L LY QPI E G + +L +D Sbjct: 563 FQFYNQELTVNAAERLLMENLLRQALAKGELQLYYQPIMELATGELHGAEALLRWNSFDL 622 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNI 589 G++ PDKF+P+ + + VL + + P ++NL +Q++ Sbjct: 623 GMVGPDKFIPIAEERGMIVDIGAWVLREGCRTAVAWNALRSQPCVLAINLSSRQFMQQDF 682 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 RI + PQ + EITE +++ +E LH G IAIDDFGTGY+ Sbjct: 683 LSRITDCLQETGCHPQWLKFEITESLLLHDSDHIRQTLEALHSIGITIAIDDFGTGYSAL 742 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 L + +KID F+ DI TNT A++V++I +A + +VAE VET +Q LL Sbjct: 743 GYLNKFPVSQVKIDRSFISDIATNTESALLVKAIIAMADSLGKELVAEGVETAEQAKLLS 802 Query: 710 KLGVQYLQGYLIGRPQPLA 728 +LG QY+QGY GRP PL Sbjct: 803 QLGCQYVQGYYYGRPVPLE 821 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 186/435 (42%), Gaps = 23/435 (5%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDN 359 ++R + + QA DPLT LPN A+ +A + L +D Sbjct: 474 IIRDISERKAAEDQLVHQAYHDPLTGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDR 533 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + ++ + + +++ + + + G E L++L + + Sbjct: 534 FKNINDTLGHAVGDRILTTLAQRMQETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQ 593 Query: 420 ILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL---GQLSWLAEQSCAHHHVLA 473 L+ S+ + + + + + + L+ + A++ ++ Sbjct: 594 KLSDLVSQPVLIDGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGRNN---- 649 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 ++ +++ L N +R AL + ++++Y QP + G + +L + + Sbjct: 650 FQFYTPDMNAHAGRRLQLENNLRKALQRQEMVVYYQPQVEMDSGRIIGSEALLRWMHPEH 709 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G+++P+ F+PL + + LE + + + +VNL +N+ Sbjct: 710 GLISPNDFIPLAEETGVIEEIGAWALEQACQQTVAWQKNHPELKIAVNLSARQFRNENLV 769 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I ++ + ++ + + +E+TE + + ++ + +L K G +AIDDFGTGY++ Sbjct: 770 DDIEQILNKTGLAARHLEMELTESLLMEDVDVAIDLMNRLTKLGITLAIDDFGTGYSSLS 829 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L R D +KID FV + + I R+I L + LS++AE VE +Q+ LL + Sbjct: 830 HLNRFPIDKLKIDRSFVNSMSLDNNG--IARTIITLGRTLGLSIIAEGVENNEQRQLLLQ 887 Query: 711 LGVQYLQGYLIGRPQ 725 LG QGY RP Sbjct: 888 LGCPQAQGYYFSRPV 902 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 104/469 (22%), Positives = 194/469 (41%), Gaps = 19/469 (4%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR---SEWLNRRWHLQALTDPLTL 333 N ++ +E + A ++ + V + H + + + A D LT Sbjct: 282 SNSILVRRDGSELPIDESRAPILDRQGQIAGTVTVLHDVSVTRAMELKMAHLAQHDFLTD 341 Query: 334 LPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN R L+ A Q + + ID + ++ G M ++S+ L Sbjct: 342 LPNRRVLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLTT 401 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWG 442 ++ ++ + + G E +++L+ T + + S L + Sbjct: 402 CVRASDTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGIS 461 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + + L+ Q+ ++ + ++ L +++R AL++ Sbjct: 462 TCPNDADDAETLIKHADIAMYQAKEKGRN-NYQFFRADMNERVLQRQSLESSLRLALERQ 520 Query: 503 DLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + LL+ QP N E G + ++ + G++ P F+ + L VL+ Sbjct: 521 EFLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEA 580 Query: 560 LKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + P +VN+ + +K+ +I + + P+ + LE+TE Sbjct: 581 CRQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMK 640 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 AE ++ + L G ++AIDDFGTGY++ L RL D +KID FV D+ T T +A Sbjct: 641 EAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAA 700 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 IV +I + K+ +L+V+AE VETQ+Q ALL QGY RP + Sbjct: 701 IVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSV 749 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 121/488 (24%), Positives = 206/488 (42%), Gaps = 29/488 (5%) Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWL 318 R+ WA L Q FL + + V + S + M + Sbjct: 411 RHLDEQGGWAGELLLRQRNGQLFLAWL-------TLRTVRLGTSTYHVCMFGDLSDRQAA 463 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGL 369 RR A D LT LPN L + + L ID+ + ++ G Sbjct: 464 ERRIQYLAYFDTLTGLPNRALLTDRANMALRGVEGDAAPALALLLLDIDHFKHINDTLGH 523 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR----Q 425 ++S+ + L ++E + + + G E +++L IL + Sbjct: 524 STGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDANASRAASVAQEILRRLGFVCR 583 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQ-ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 I ++ + + G A DG TL + A+Q + + + Sbjct: 584 IGEHDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAKQEGRNTLRFFF----PEMQER 639 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPL 541 T + V L +R A+++G++ L+ QP + + G + +L G ++P +F+PL Sbjct: 640 TLRHVQLTGALRGAVERGEMQLHYQPQVDLQTGELSGVEALLRWTHPLFGAVSPGEFIPL 699 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKNIAGRIIRLFKRY 600 + L VL + + LA D P +VNL L +A +I + Sbjct: 700 AEESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSVLQFNLPGLAQQIASILSEA 759 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P +E+TE A + E+++ I++LH G ++++DDFGTGY++ LKR + D + Sbjct: 760 GVPPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGYSSLAYLKRFRLDRL 819 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KIDG FV+D ++ D IV +I +A++ L+ VAE VET Q ++ LG +QGY Sbjct: 820 KIDGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLEVIRALGGDAVQGYW 879 Query: 721 IGRPQPLA 728 I RP P A Sbjct: 880 ISRPLPAA 887 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 117/455 (25%), Positives = 193/455 (42%), Gaps = 25/455 (5%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 A L+ +I ++ MV R + A DPLT LPN R L EQ Sbjct: 582 AVELSGMILGDSHIVTMVDQSQR-KAAEEEVRYLAYNDPLTGLPNRRLLLDRLEQALAMS 640 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +DN + ++ G M +R + R L + E+E L + G E ++ Sbjct: 641 ARHQLCGAVMMLDLDNFKTINETQGPDMGDRLLREVARRLRDCVPEDETLARHGGDEFVV 700 Query: 404 VLSG-----PETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 VL E R + M + + + F G +E+ LL Sbjct: 701 VLKDLGADPQEAANRAEEMGQTILAAIRAPFDIDGQQHHTALSVGIAIFRGVRESADELL 760 Query: 456 G--QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 L+ ++ + D + + +++ L +R LD G L L+ QP + Sbjct: 761 KRSDLAMYEAKAAGRDTLRFFDPQ---MQAAVSERAALEADLRAGLDAGQLELFYQPKVD 817 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--K 570 G + ++ D G ++P +F+PL + L R V+ S LA Sbjct: 818 QGRITGAEALVRWRHPDRGFISPAEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVL 877 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 +VN+ P + + +++ + + LE+TE + E ++ + QL Sbjct: 878 GELTVAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQL 937 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 +G ++DDFGTGY++ LKRL +KID FV+D++T+ DA+I R+I L + Sbjct: 938 RGYGVGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSL 997 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 L VVAE VET+ Q+A L + G QGYL+ P Sbjct: 998 GLRVVAEGVETEAQRAFLERNGCHAWQGYLLSPPL 1032 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 114/486 (23%), Positives = 201/486 (41%), Gaps = 30/486 (6%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 L P + + + + +Y + F A V + V + + Sbjct: 716 LGTPLRSRGKVIGAMVVQHYEDS-----------EFFSARDAELMVPVAEQVAVAIERKQ 764 Query: 318 LNRRWHLQALTDPLTLLPNF--------RALEQAPEQEA-GKSFCCLRIDNLEFMSRHYG 368 AL DPLT LPN RA+++ ++ + L +D +F++ +G Sbjct: 765 GEEMLTHLALHDPLTGLPNRALLLDRIERAIQRRRRNDSYRFAVLMLDLDRFKFINDSHG 824 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 + + + R + P+++ + + +L G E L+L ++ R+ + L + R Sbjct: 825 HTTGDNLLVEVARRMRPVVRAGDTVARLGGDEFALLLEDVDSPRRIVQITRRLLAALERP 884 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + +T LL Q+ A + + T Sbjct: 885 VRMGAKVVRTSASIGMVLRTQGYDTADALLRDADIAMYQAKAQGKGR-FRVFNQSMHRHT 943 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLI 542 + + L + A+ + L L QP+ +G G++ ++ G + P +F+P+ Sbjct: 944 MEMMTLEGDLSMAMRRKQLYLEYQPVLAVDGARLLGFEALVRWRHPTEGAVPPARFIPMA 1003 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + L R VLE LA G SVNL Q N+ GR+ R+ Sbjct: 1004 EETGLILRIGQWVLEQAAATLARWRATLPGAHDLYVSVNLSARQASQPNLTGRVARILSD 1063 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 + P+A+ LEITE + + ++ +E L + G I IDDFGTGY++ L+R D Sbjct: 1064 TGLPPEALKLEITETAIMKDPDGALQRLEALRRLGVGIGIDDFGTGYSSLAYLQRFPVDT 1123 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +K+D FV + + + IVR++ L ++ L VVAE VET +Q A++ +LG +QGY Sbjct: 1124 LKVDRSFVSAVAGDAENREIVRTVVTLGRSLGLHVVAEGVETAEQFAIVAELGCHSVQGY 1183 Query: 720 LIGRPQ 725 RP Sbjct: 1184 HFSRPV 1189 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 100/445 (22%), Positives = 187/445 (42%), Gaps = 22/445 (4%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCC 354 + + + + R + DPLT LPN R A++ A ++ + Sbjct: 530 INYVGVFADISEIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEIALLF 589 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D + ++ G M + + + + +++++ + +L G E ++++ Sbjct: 590 VDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLREREDA 649 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ---SCAH 468 + + S + + L + + + + L+ Q + Sbjct: 650 AKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKN 709 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILAR 525 +H +S ++ L N +R AL + +Y Q + E G + ++ Sbjct: 710 NHCF----YSADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRW 765 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTL 584 + + G+++P KF+PL + L VL + SVN+ + + Sbjct: 766 IHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQI 825 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + N A + + + LEITE N E + +++ G R+AIDDFGT Sbjct: 826 QRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGT 885 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL D IKID FV+D+ N+ DA I +I +A++ +V+AE VET+QQ Sbjct: 886 GYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQ 945 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L K+G Q QGYL RP ++ Sbjct: 946 ASFLKKIGCQQGQGYLYSRPVTASE 970 >UniRef50_Q2BRD7 Two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRD7_9GAMM Length = 709 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 154/698 (22%), Positives = 285/698 (40%), Gaps = 50/698 (7%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 V + G+ T+ F+ S+ T Q V+ A + L + G S V+ Sbjct: 16 VAILALGILATSSLAFYFSYQDTLAGKKDQIRSVVQATSSQVIALRSEKAAGNISENVYN 75 Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 L+ + S Y+ D + + + + F + +L SL M+ Sbjct: 76 NRLR-NLINDVSYGHSGYIYLMTQDLRVHLHPKRPELEG-FLISELPSLSHP----QMMI 129 Query: 184 YYLTRMIVSP---HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 ++I SP HF ++ W + PS G T + L S L+L Y +D + Sbjct: 130 DGFKQVISSPSGSHFWELYWPK---PSGGPSVAKLTYAELIPESNLILGTGI-YIDDLVP 185 Query: 241 GYLVPVF-FIIFTLGV------------GKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 Y+ F ++I T+ V + P +L+ ++ + + +Q L E Sbjct: 186 LYIQRAFSYLIITIVVLCAALLTAALISRNIVRPIASLSKQMNDVAHDDIDQEILY-TEQ 244 Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE 347 + + + L F L+ R+ ++ DP+T L N RA+ +A E+E Sbjct: 245 QDEIGSMARALEHFREHLIENKRL----RYMQEHVQFLENFDPVTRLYNRRAMGEALERE 300 Query: 348 --------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 F +R+D L ++ G R + L + N L +L Sbjct: 301 VIRNFESQEHVYFLFIRLDLLRNLTIELGDEQRDQILIETANRLRQRLSVNHSLGRLSEG 360 Query: 400 ELLLVL----SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 L++ + + +++ L I ++ + + F + + L+ Sbjct: 361 CFGLMIIDKPDDVDLDSLTTELLHTLEQ-PIQLDSIQIQIAARIGITSFPEDGDQQFELI 419 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE 515 G+ A+ + ++ Q +++ L + A++Q L QP+ + E Sbjct: 420 GRAEIAAKTAKKREQGWLY--FNQIRDTQVKQKMELWQDLSIAMEQDQFYLVFQPLFDLE 477 Query: 516 GEG---YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKK 571 + +L + G ++P F+PL Q L +R D VL ++ + + Sbjct: 478 SNTPLSAETLLRWTHPEHGPISPATFVPLAEQSGLISRLDHWVLNAVARQCRLWLDNELT 537 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 PR ++NL ++ L+ + R+ FK +++ + LE+TE + ++++ Sbjct: 538 LPRIAINLSGISFLRNDFEQRLTNTFKAHNVPLHHIELELTEGVLIEDLARIQEKLQRVR 597 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G ++IDDFGTGY++ R+K L D IKID F+ DI N D IV++I +A+ Sbjct: 598 DMGISVSIDDFGTGYSSLSRIKNLPVDHIKIDKSFIDDIDKNPQDLKIVQAIILMAQGLQ 657 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L VVAE VET++Q ++L + +QGYL+ RP + D Sbjct: 658 LKVVAEGVETEKQLSILREEHCDVVQGYLLSRPLSVED 695 >UniRef50_Q3SMK7 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMK7_THIDA Length = 738 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 97/435 (22%), Positives = 186/435 (42%), Gaps = 19/435 (4%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRID 358 + + + H QA D LT LPN L QA + L +D Sbjct: 286 GVAKDVTERKQAEETVHYQAYHDLLTGLPNRALFRDHLALMLAQAKRSHKTLAVLSLDLD 345 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP----ETEGRL 414 + + ++ G + + ++ L ++E + L +L G E ++L + E Sbjct: 346 HFKVINDSLGHTIGDELLLAVGARLRQCLREGDTLARLGGDEFAVLLPTLLSRGDVEQIC 405 Query: 415 QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + ++ +L SR ++ + + + E + L+ Q Q+ A L Sbjct: 406 RKIIQVL-SRPVYVKGHEIYISVSIGACVAPDDGEMIDSLIRQAEIAMYQAKAQGRSR-L 463 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 E + ++++ + +R AL + + +L+ QP + E G++ +L G Sbjct: 464 QFWEAGMQAPYSERMQIEADLRRALARNEFVLFYQPQVDTVSGEVRGFEALLRWWHPQRG 523 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIA 590 ++P +F+P+ + + VL +A R SVN+ L + Sbjct: 524 FLSPAEFIPVAEESGVIVPIGDWVLREASAQMAEWRRAGLPQVRLSVNISARQLESPDFV 583 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++R + + + Q + LEITE + E++ + +L G R+AIDDFGTGY++++ Sbjct: 584 ESVMRAVQVHALDGQQIELEITESLLMRDFEANAIKLGRLSASGIRLAIDDFGTGYSSFK 643 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L R +KID F++++ + IV ++ + + +L+VVAE VETQ Q A L + Sbjct: 644 YLSRFPIHTLKIDQSFIQELER-EENLSIVNAMVAMGRGMNLNVVAEGVETQSQLACLQQ 702 Query: 711 LGVQYLQGYLIGRPQ 725 + +QG+ P Sbjct: 703 MQCHEMQGHYYSVPM 717 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 98/438 (22%), Positives = 178/438 (40%), Gaps = 15/438 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCC 354 + + + A D LT LPN R L+ A + Sbjct: 498 TNYVAIKEDITEKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMF 557 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +DN + ++ G + + I + + ++E + + +L G E +++ + + Sbjct: 558 LDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAM 617 Query: 415 QHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ S+ + L + + + + LL A + Sbjct: 618 HIATTLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFKTLLKNAE-TAMYRVKNDSRN 676 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + ++ + L N +R AL + +L LY QP N + G + +L + Sbjct: 677 GFHFVTPEMQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPE 736 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLLQKN 588 G+++P +F+P+ VL + ++ D P +VNL + QKN Sbjct: 737 LGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKN 796 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + + + + LE+TE + ES + + H+ G R++IDDFGTGY++ Sbjct: 797 LLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSS 856 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK+ + +KID F++DI + D IV +I D+A L +AE VET +Q A L Sbjct: 857 LSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFL 916 Query: 709 HKLGVQYLQGYLIGRPQP 726 G +QGY +P P Sbjct: 917 RLHGCHEVQGYYFSKPLP 934 >UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=B1J7P7_PSEPW Length = 699 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 107/439 (24%), Positives = 189/439 (43%), Gaps = 18/439 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK--------SFCCLR 356 +L++ + + H A D LT LPN + +Q + + CL Sbjct: 255 VLFVAEDATEELAAHAQIHHMAHHDALTGLPNRTLFNERLKQALVRGHQNDKLTAALCLD 314 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-TEGRLQ 415 +DN + ++ G +R++ + L ++E + L +L G E +VL+G + E Sbjct: 315 LDNFKNINDSLGHAFGDKLLRALGKRLRRELREQDTLARLGGDEFAVVLTGLDGREAACN 374 Query: 416 HMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 ++ + +G + E + LLG ++ + Sbjct: 375 TAKRLIEAICPPFQIEGHQFTVGVSIGIAIAPDDNEQAEQLLGYADMALYEAKRNGRNRY 434 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDG 530 E+ +++ + +RTAL G L L+ QPI +++ GY+ +L Sbjct: 435 ECFHVELDVAARQRRL-VETDLRTALHLGQLHLHYQPIVDQQTSSVTGYEALLRWEHPTR 493 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 G++ P F+P+ + L + L + A+ ++ SVNL P+ N+ Sbjct: 494 GMVMPMDFIPIAEETGLIHELGTRALNLACQEAASWDSEQ---TVSVNLSPVQFKNANLV 550 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + ++PQ + LEITE N+E ++ + L G I++DDFGTGY++ Sbjct: 551 HTVALALADSGLAPQRLELEITESVLLGNSEENVRTLRALKDLGVSISLDDFGTGYSSLG 610 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 L+ D IKID FV D+ + IVR+IT+L+ + + AE VE+++Q L Sbjct: 611 YLRSFPFDRIKIDKSFVHDMCDSREAMSIVRAITELSNSLMIKTTAEGVESEEQMQRLAA 670 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G + QGYL GRP P + Sbjct: 671 EGCSHFQGYLYGRPVPAGE 689 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 109/438 (24%), Positives = 178/438 (40%), Gaps = 16/438 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCC 354 + + R + R QA D LT LPN AL +A + Sbjct: 385 TNYVGISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILF 444 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS---GPETE 411 L +D + ++ G + ++ + + LL +E++ L + G E +++L G E Sbjct: 445 LDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDA 504 Query: 412 GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + + + + E +Q LL ++ Sbjct: 505 AVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKN 564 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKY 528 E +S +++ L +R AL + + +L+ QP I G + ++ Sbjct: 565 -DYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLP 623 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQK 587 D G++ P F+PL + VL + PR SVNL + Sbjct: 624 DRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKD 683 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ + R+ K +SP + LEITE N E ++ ++ L + G +AIDDFGTGY+ Sbjct: 684 NLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYS 743 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR +KID FV+ I +N D I SI L K +L VVAE VETQ+Q + Sbjct: 744 SLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTV 803 Query: 708 LHKLGVQYLQGYLIGRPQ 725 L QGYL +P Sbjct: 804 LRNYQCDEAQGYLFSQPV 821 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 96/439 (21%), Positives = 189/439 (43%), Gaps = 20/439 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEA-GKSFCCL 355 ++Y+ + + + QA D LT LPN RAL +A + + + Sbjct: 365 IVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLDRALTRARRRGDYQYAVLMI 424 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 ++ + ++ G + + R L+ ++ + + +L G E ++L +++ + Sbjct: 425 DLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMDTVARLGGDEFAVILEELKSKKEVM 484 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 +V+ + + + T + G + ++ + +L ++ Sbjct: 485 AVVDRIGAALGKPCMLCGTTVTPGASVGIVLRTRDYQSPEDILRDADIAMYRAKESGRPS 544 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 + + + + + L +R ALD+G+LLL+ QPI + EG++ ++ D Sbjct: 545 MI--FDRRMHQEILDAINLEADLRAALDRGELLLHYQPIVDVQTGRIEGFEALVRWDHPD 602 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQ 586 G++ P +F+PL + L V+ + L + SVN+ ++ Sbjct: 603 RGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVNVSCHQFVK 662 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + + + + + P + LEITE +A+ + + +L G +IAIDDFGTGY Sbjct: 663 EGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHTAGELSRLKALGVKIAIDDFGTGY 722 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L++L D +KID F+ N IV+SI LA++ L+V+AE VE Q Q Sbjct: 723 SSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSIIALARSLGLTVIAEGVEHQDQLD 782 Query: 707 LLHKLGVQYLQGYLIGRPQ 725 L QG++ RP Sbjct: 783 KLRNADCDKAQGFMFSRPV 801 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 97/451 (21%), Positives = 187/451 (41%), Gaps = 16/451 (3%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-- 351 +LA++ + + R D LT LPN + + + Sbjct: 428 VLAIMAARVSAEIEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASL 487 Query: 352 ------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + +D+ + ++ G + + + R L + + + +L G E ++L Sbjct: 488 GQHQVGVLFIDLDHFKKINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIIL 547 Query: 406 SGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + + +N R + L + + G+ + + LL A Sbjct: 548 DQLNNIENVILIAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCAD-AA 606 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 ++ + ++ + L +R A+D+ L++Y QP ++ G Sbjct: 607 MFKAKELGRDNYRFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGA 666 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + ++ + G+++P F+P+ + L VL P R SVN Sbjct: 667 EALVRWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVN 726 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + QK++ + R+ + +SP+ + LEITE ++ + ++ + +LH G +++ Sbjct: 727 MSARQFRQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLS 786 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LK+ +KID FV+D++ + DA I ++ DLA+ +L+V+AE Sbjct: 787 IDDFGTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEG 846 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +E Q Q L G Y QGYL RP P + Sbjct: 847 IEQQDQHQFLLDRGCGYGQGYLFSRPIPAHE 877 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 93/441 (21%), Positives = 189/441 (42%), Gaps = 15/441 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCC 354 + M + + AL D LT +PN LE+ E + Sbjct: 118 TNYVAMFSDITEHKRNVEQLTRLALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLF 177 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +D + ++ G + ++ + L ++++ + + + G E +++L + Sbjct: 178 LDLDRFKNINDTLGHRVGDMLLKETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREA 237 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 +M + R +N+ + + + + + L+ Q+ + Sbjct: 238 AYMAEKIVESLKRPFCFNHQEIYISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRN 297 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKY 528 + G + L +R AL++G+ LY QP I+ K+ + ++ Sbjct: 298 -QYALYHAGMHGNGKQLFQLETALRKALERGEFELYYQPQLDIKTKQIRAVEALIRWNHP 356 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 + G ++P F+PL + L ++ + L + S+N+ P+ Q + Sbjct: 357 EKGFISPGMFIPLAEESGLITPISDWIMMQACEHLKQLQLRFPYVKMSINISPIYFQQID 416 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++ + + +++P+ + LE+TE +AE S+ + +L G IAIDDFGTG+++ Sbjct: 417 FLKKLQKTIESVNVNPRLIELELTESAVMPHAEQSVERLTKLKTMGMSIAIDDFGTGFSS 476 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L R DI+KID F K + D+ IV++I +A + + VVAE VET++Q +L Sbjct: 477 LSYLHRFPIDILKIDRSFTKQLSRYQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQYQIL 536 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 K ++QGY + +P +++ Sbjct: 537 EKQSCDFVQGYYVSKPLSISE 557 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 104/468 (22%), Positives = 188/468 (40%), Gaps = 19/468 (4%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR---IYHRSEWLNRRWHLQALTDPLTL 333 Y+ + + + F V + + +V + A D LT Sbjct: 190 YDSTMIHTDGSIRDIIFSKTVFGNTDGSIGGIVGTILDITERKRAEEAIQQLAYFDALTG 249 Query: 334 LPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN + L QA + G L +D + ++ G + ++ + Sbjct: 250 LPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIAS 309 Query: 386 LMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWG 442 ++E++ + +L E +++L G E + +V + R I + Sbjct: 310 SIRESDTVARLGSDEFVVILPGVGHEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIA 369 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 + + + LL ++ ++ + +++ L ++R AL++ Sbjct: 370 IYPTDGSSADILLKNADMAMHKAKEFGGD-GYQFYSSELNHRAMERLTLETSLRRALERR 428 Query: 503 DLLLYAQP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + LL+ QP I + G + +L + G+++P +F+PL + L VL S Sbjct: 429 EFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSA 488 Query: 560 LKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + L H SVN+ + + + P+ + LE+TE Sbjct: 489 CEQLRALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIME 548 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 +E++ + +L + G +AIDDFGTGY++ LK D +KID FVK++ + +A Sbjct: 549 RSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAA 608 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 I +I LA +L VVAE VET +Q A L L +QGY I RP P Sbjct: 609 IAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLP 656 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 113/476 (23%), Positives = 191/476 (40%), Gaps = 23/476 (4%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 N G TE + + + + R A D LT LP Sbjct: 524 FINTRKDGGTYTELATIAPIKQADGSVSHYVAIKEDITGRREAEARIRQLAYYDTLTGLP 583 Query: 336 NFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N + A L ID+ + ++ G + +R + + L + Sbjct: 584 NRSLMWDRLRHAIAASARSGASGMLMLLDIDHFKLLNDTQGHEVGDALLREVAQRLRGAL 643 Query: 388 QENEKLYQLPGSELLLVLSG-----PETEGRLQHMVNILNSR-----QIHWNNTGLDMGY 437 +E + + ++ + +V+ E GR + + L+ ++ + +G Sbjct: 644 REEDTVARVGDDDFAIVVENLGADRDEAIGRAEKIAEHLHRCVTAPCELGLASGPYHVGA 703 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F G +L Q ++ L + E + + L +R Sbjct: 704 SLGLTLFRGRNAAADAVLKQAEVAVARAKDDGRNL-IRFFSEAMQAVVAARAELELKLRA 762 Query: 498 ALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 AL LY QP ++ G G + ++ +G +++P F+PL + L V Sbjct: 763 ALACNGFRLYYQPQLDRNGRVIGAEALIRCFDAEGEMISPAAFIPLAEETGLIVPIGEWV 822 Query: 556 LESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 LE+ L G S+N+ Q + G++ +R+ I P + +E+TE Sbjct: 823 LETACAQLRAWQRTPSTAGLSLSINVSARQFHQPDFVGKVAAAIERHRIRPGGLEIELTE 882 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + E+++ + Q+ G R A+DDFGTGY++ LKRL D +KID +FV+D+ + Sbjct: 883 SVVIGDIETTVLRMRQIKALGVRFALDDFGTGYSSLSYLKRLPFDQLKIDQMFVRDMEKD 942 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T IVR+I L+++ L VVAE VET Q LL G + QGYL GRP P+ D Sbjct: 943 TSSEAIVRAILALSRSLDLKVVAEGVETAAQHELLLTRGCELFQGYLFGRPVPIED 998 >UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW24_9GAMM Length = 796 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 116/443 (26%), Positives = 201/443 (45%), Gaps = 20/443 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 +L + + L+ + QA D LT L N E+ Q ++G + L Sbjct: 350 VLIVSEDISEARQLSNQLSHQASHDALTGLVNRGEFERRLRQLVERAHVDDSGHALLYLD 409 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---ETEGR 413 +D + ++ G + +R + L +++ + L +L G E +++ + E Sbjct: 410 LDQFKIINDTCGHVAGDELLRQLAGLLKHKVRKGDTLARLGGDEFGVLVENCTMEDAERL 469 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCAHHHV 471 Q M +++ S Q W + +G ++ Q A + + V Sbjct: 470 AQTMCDVVASFQFFWGVSSFRIGVSIGLASIASGSGDYADIMSQADSACYAAKDLGRNRV 529 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR-----NKEGEGYDEILARL 526 + ++ + + + ++ I + L+Q LY QPI +G Y+ ++ Sbjct: 530 HIYRENDAELARRFGE-MQWVSKIESTLEQDRFELYFQPIVPIDNTRLDGRHYEVLVRMR 588 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPLTLL 585 DG I+ P F+ ++NL R D +V+ L+WL+ HP K SVNL TL+ Sbjct: 589 DVDGNIVPPASFMSAAERYNLMGRIDRKVVSQTLRWLSLHPDHLKNLSVCSVNLSGQTLM 648 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + I K++++ P+ + E+TE A N + I L G + ++DDFG+G Sbjct: 649 DDDFLEFIFDELKQWNVDPRKLCFEVTETAAIENLTKASDFIRSLKDRGCKFSLDDFGSG 708 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 +++ LK L D IKIDG+FV+DIV + +D +VRSI ++A+ VAEFVE + Sbjct: 709 LSSFAYLKNLPVDYIKIDGLFVRDIVKDPIDYSMVRSINEIAQVMGKKTVAEFVEDELIL 768 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L +GV Y QGY I R QP++ Sbjct: 769 NALRNIGVDYAQGYYISRDQPIS 791 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 108/472 (22%), Positives = 206/472 (43%), Gaps = 19/472 (4%) Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV--RIYHRSEWLNRRWHLQALTDPLT 332 N + F + + + + ++ +++ + ++ + + + L + A D LT Sbjct: 458 FNSYEVFFRKDHSNFPVEYVTSLIKEGDKVVGEVITFKDITQRKQLEEKIKYHAYFDSLT 517 Query: 333 LLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN + L+ A + L +D + ++ G ++S+ + L Sbjct: 518 DLPNRVLLIDRLTQGLKYAKVNGEKLAVLYLDLDRFKLVNDSLGHSYGDLLLQSVAKRLS 577 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAW 441 + E+ + + G E + L + E + ++N +N S+ + + + + Sbjct: 578 ACVPEDATVSRQGGDEFTIYLPNIKCENDILKVINCINASFSQPFNLIDNEIYIKTSIGI 637 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F N +T + L+ +S + E + +T + + L N + AL++ Sbjct: 638 SLFPKNGDTTETLIKNADTAMYKSK-ETPGTSYHFFSEGMDTRTFESIKLENDLYKALER 696 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 +L+++ QP N + +G + +L + G++TPD+F+PL + L VL+ Sbjct: 697 DELIIFYQPQINYKTNKIKGVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEWVLKE 756 Query: 559 LLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 K L SVNL Q N+ I + +SP+ + LE+TE Sbjct: 757 ACKQLKEWHNQGYPLISMSVNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLELTENLIV 816 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 N E ++ + QL+ G +AIDDFGTGY++ LK L +KID FV++++T+ A Sbjct: 817 KNTEVTLKTMTQLNGLGVNLAIDDFGTGYSSLGYLKNLPISTLKIDKSFVQEMLTD-DAA 875 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +I LA+ L V+AE VET++Q L + +QGY +P + Sbjct: 876 AITNTIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFSKPMKAGE 927 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 172/442 (38%), Gaps = 15/442 (3%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFC 353 + + + + + + D LT LPN + +E A + Sbjct: 510 TTHYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALV 569 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ G + + + + + + + + G E +++L+ + Sbjct: 570 VLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILADSDAVRA 629 Query: 414 LQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + ++++ + L + + + + L+ A Sbjct: 630 ARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSAD-AAMYHAKSLGR 688 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 +S T+++ L N + AL G+ LY QP ++ G + ++ Sbjct: 689 NTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHP 748 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQK 587 + G + P +F+PL + + R VLE + +VNL PL L + Sbjct: 749 EVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKD 808 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ L ++P + LE+TE + + +L + G R +IDDFGTGY+ Sbjct: 809 DFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYS 868 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L R D +KID F++D+ A I R+I LAK L VVAE VET +Q Sbjct: 869 SLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEF 928 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L + G QG+ RP P + Sbjct: 929 LERAGCDGAQGFYFSRPVPADE 950 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 110/452 (24%), Positives = 184/452 (40%), Gaps = 29/452 (6%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCC 354 + + R + ++ A DPLT LPN R A+ A + + + Sbjct: 392 LGYRGVGRDITERKRVDAEIERLAFFDPLTGLPNRRLLTDRLRRAIGTAARERSHGALLF 451 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG------- 407 L +DN + ++ G M + + LL + + + G E +++ G Sbjct: 452 LDLDNFKDLNDTLGHDMGDRLLVQAAQRLLACAGAGDTVSRFGGDEFVVLAEGLPGDMHR 511 Query: 408 --PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL-----GQLSW 460 + + L F G + L+ Sbjct: 512 ARADAAVLANRITAALGRPYAVGGMGHHHSTPSIGLALFGGGTGDGAGVDDLLKHADLAM 571 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--G 518 ++ + + D + + L + +R AL+ +LLL+ QP+ N +G G Sbjct: 572 YQAKAAGRNTIRFFD---PSMLQAVLARAALESELRLALESDELLLHYQPLVNGDGSMLG 628 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFS 576 + ++ G++ P +F+P Q L VLE L + Sbjct: 629 AEALVRWRHPQRGLVMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWSRSAATAQLVLA 688 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ Q + ++++ +R P+ + +E+TE ++ E + +EQL G Sbjct: 689 VNVSVRQFRQPDFVDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVG 748 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 AIDDFGTGY++ LKRL D +KID FV+D++T+ DA IVR+I LA++ L VVA Sbjct: 749 FAIDDFGTGYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVA 808 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 E VET Q L + G + QG+L GRP P A Sbjct: 809 EGVETTGQLKFLQRHGCKAFQGHLFGRPAPAA 840 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 102/443 (23%), Positives = 194/443 (43%), Gaps = 18/443 (4%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCC 354 + + + + QA DPLT LPN +AL++A E G + Sbjct: 879 AHYVGVFSDITELRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFF 938 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR- 413 + +D + ++ G + + + L LM+E++ + +L G E L+V+ Sbjct: 939 IDLDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAV 998 Query: 414 ---LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + ++N+L + + + +G F + + L+ ++ Sbjct: 999 SHIAEKILNVLQASPVTVEHEFF-VGASIGISVFPQDGADAETLMKNADVAMYRAKERGR 1057 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 + + ++ + ++ + +R A+++G+L +Y QP + + G + ++ L+ Sbjct: 1058 N-TYEFFTKDLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRWLR 1116 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVL-ESLLKWLATHPCDKKGPRFSVNLMPLTLLQ 586 G++ P +F+ L + L V + +W SVN+ + + Sbjct: 1117 PQQGLVLPGEFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFAR 1176 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 I R + + + + LEITE S+AE+S+ ++ L G + IDDFGTGY Sbjct: 1177 GRIQQTARRTLELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGY 1236 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LKRL + +K+D FV+ + +T D I R++ L + L+V+AE VET+ Q+ Sbjct: 1237 SSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQRE 1296 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L G +QGYL GRP P D Sbjct: 1297 FLTGEGCDEMQGYLRGRPMPFDD 1319 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 97/447 (21%), Positives = 178/447 (39%), Gaps = 18/447 (4%) Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--- 351 +AV + +++ + + + A D LT LPN L EQ K+ Sbjct: 270 VAVFFPETGYFAFLMEDVTQRKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRD 329 Query: 352 -----FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV-- 404 L +D + ++ G + + L ++ ++ L ++ G E +++ Sbjct: 330 KTRVVLLFLDLDRFKVINDTMGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFT 389 Query: 405 LSGPETEGR--LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 L GP+ QH+++ + S + + F + LL A Sbjct: 390 LEGPQLNVSPLAQHLIDSITSV-YPISGRDVYASTSIGIATFPDDGGDCNSLLRCADM-A 447 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGY 519 + ++ + ++ + +R AL++ + L QPI N G Sbjct: 448 MYAAKEGGGKGYHFYSPEMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGA 507 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + +L + G++ PD F+ + + VL + + + P R SVN Sbjct: 508 EALLRWSDPEKGLIMPDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVN 567 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + Q N + + + + P + LE+TE + E++ + QL + I Sbjct: 568 VSGRQFCQANFTDTVCSIIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIV 627 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFG GY++ L++ D IKID F++D+ ++ D IV +I +A L VVAE Sbjct: 628 IDDFGAGYSSLGYLQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEG 687 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQ 725 VET +Q L + G +QG+ RP Sbjct: 688 VETSEQLDFLKEQGCHEIQGFYFHRPL 714 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 101/455 (22%), Positives = 184/455 (40%), Gaps = 15/455 (3%) Query: 289 YSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------ 342 Y ++ +L++ L + R+ R A D +T LPN A + Sbjct: 160 YVGTTVMVMLVTLFAAALLLSRLQRAMLKAEERAGFLANYDTVTDLPNRHAFSRHFHLLL 219 Query: 343 --APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 A + + +D+ + ++ G + + + + L+ + +Y++ G E Sbjct: 220 EGARHRRGVLALLVFDLDDFKVINDTLGHDVGDKLLHLVAQRLMVAAGKKNTVYRVGGDE 279 Query: 401 LLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 ++L P ++ + N + I N+ +G + + E LL Sbjct: 280 FAMMLDQPADVENVEAVANRFIRALAPPIVLNDRNFYIGVSIGASIYPYDGEDAAHLLRD 339 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--- 514 + + + +++ ++LL +R AL++ LY QP + Sbjct: 340 ADAAMYYAKSRGKN-NFQMFSAEMHHKSSTRLLLETELRVALEEKQFELYYQPQFSLPDC 398 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR 574 + G + ++ G++ P F+P+ + L R VL + R Sbjct: 399 KLVGVEALIRWHHPQRGLLCPSSFIPVAEETGLIVRIGEWVLREACRQAMEWKALGVPLR 458 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVNL Q+N+ + ++ +R + + LEITE +AE++ + L G Sbjct: 459 MSVNLSGRQFRQENLVQTMTKIIERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMG 518 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 +AIDDFGTGY++ LKR +KID F++DI + D I + +A + L V Sbjct: 519 MHLAIDDFGTGYSSMAYLKRFPVSRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEV 578 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET+ Q L + G +QGYL RP + Sbjct: 579 VAEGVETKAQLQFLREQGSDMVQGYLFSRPVSARE 613 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 95/443 (21%), Positives = 176/443 (39%), Gaps = 20/443 (4%) Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FC 353 + + + + H A D LT LPN L+ E S Sbjct: 452 TTHFVAAMSDITPMKQYETTLHRLASHDVLTGLPNRALLQDRLENAIAYSARNGHAVWVV 511 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET--- 410 + +D +F++ G ++ I L ++E++ + +L G E +LVL Sbjct: 512 LVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARLGGDEFVLVLPECGDGPS 571 Query: 411 ---EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 +Q ++ + + + + + + + LL +S Sbjct: 572 GYSSDVIQRIMEAVV-KPLTIQGSEFFLSCSMGIAVYPNDGADPTTLLAHADVAMYRSKE 630 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILA 524 ++ Q +++ + +R A++ +L+L+ QP + G + ++ Sbjct: 631 LGRN-NFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVR 689 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLT 583 G++ P F+ L + L VL++ + R +VNL Sbjct: 690 WNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQ 749 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q ++ I + + + + +E+TE ++ E ++ + L G ++++DDFG Sbjct: 750 FTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFG 809 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TG+++ LKR D +KID FV+DI N DA IV SI LA L+V+AE VET Sbjct: 810 TGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETAS 869 Query: 704 QQALLHKLGVQYLQGYLIGRPQP 726 Q +L G +QGY +P P Sbjct: 870 QMDILRAQGCNEIQGYYFCKPLP 892 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 104/472 (22%), Positives = 196/472 (41%), Gaps = 28/472 (5%) Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 L+ E S+ F ++ IS ++ + + QA D L Sbjct: 406 FIELHNCTREYHWSLQEESILFAMSASISAAL----------QRQDKEEIIRHQAFHDAL 455 Query: 332 TLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN AL A + + +D + ++ G + ++ + L Sbjct: 456 TDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLINDTLGHSIGDELLKEVALRL 515 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETE-GRLQHMVNILNSRQ--IHWNNTGLDMGYGAA 440 +++ + + + G E ++L E+ + IL++ + L + Sbjct: 516 QDCLRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDALKAAFVIRRHELFVTTSIG 575 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + + + LL +S ++ + +Q +L N++R ALD Sbjct: 576 IAIYPEDGQEAEILLQNADVALYRSKEQGRGTC-QLYNPTMNAK--EQFILENSLRHALD 632 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + + +L+ QP N E G + ++ + G+++P F+P+ + L VL Sbjct: 633 RDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIPIAEETGLIVELGEWVLR 692 Query: 558 SLLKW-LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + + + H ++NL Q N+ + ++ + ++PQ + LEITE A Sbjct: 693 TACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIESTGLNPQQLELEITETIA 752 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N E + + L G IA+DDFGTGY++ LK+L + +KID F++D+ + D Sbjct: 753 VKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFNTLKIDQSFIQDLKPASKD 812 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I+ ++ L K L VVAE V+ ++Q LL L + +QGYL RP + Sbjct: 813 VEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQGYLFSRPLSVD 864 >UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3J9L4_NITOC Length = 811 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 119/507 (23%), Positives = 216/507 (42%), Gaps = 24/507 (4%) Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 L VF +I + P + + N++ + EY++ A + S + Sbjct: 302 LATVFRVIDEQTREPIADPIAQCLKEGGAIEIANHS-VVISRNGQEYAIQDSAAPISSRT 360 Query: 303 VCLLYMVRIY---HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKS 351 +L +V ++ + + R+ QA D LT L N R E E+ A + Sbjct: 361 GEVLGVVLVFSDVTEARHMTRQITHQATHDSLTGLVNRREFEHRLERVLATLKAESAEYA 420 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--- 408 C +D + ++ G + +R + L +++ + L +L G E ++L Sbjct: 421 LCYFDLDRFKVINDTCGHVAGDELLRQVSEVLRGQIRKRDTLARLGGDEFGVLLEHCSLK 480 Query: 409 ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSC 466 + + + + Q W +G + +L A ++ Sbjct: 481 QAQRVATAIHKAIEDFQFTWEGKSFRIGVSIGLVPITKASMGIAVVLKAADTACYAAKNK 540 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR----NKEGEGYDEI 522 + + ++ ++ + V + I AL + +Y QPI KE + Y+ Sbjct: 541 GRNRIHVYHETDKELASHRGE-VQWMTRIHRALKENYFQVYFQPIIPLATEKEEKCYEVF 599 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 L GG++ P FLP ++NL+ + D ++ + WLA +P + +NL Sbjct: 600 LRLEDGAGGVVLPGAFLPTAERYNLAVKIDRWMIANTFTWLAQNPEPLR--TCFINLSGH 657 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 +L K II ++ I + EITE A +N ++ I+ L G + ++DDF Sbjct: 658 SLRNKTFLAFIIEQLEKTPIPSIQICFEITEAAATANLSCTIRFIKSLKSHGCKFSLDDF 717 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 G+ +++ LK L D +KIDG+FVKDI+ + +D IVRSI ++ + +AE+VE + Sbjct: 718 GSSLSSFAYLKNLPVDFLKIDGLFVKDILDDPIDLAIVRSINEIGQIMKKQTIAEWVEKE 777 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 + L ++GV Y QGY I PQPL + Sbjct: 778 EVLEKLREIGVNYAQGYWINPPQPLTE 804 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 129/728 (17%), Positives = 265/728 (36%), Gaps = 67/728 (9%) Query: 28 SRFISPLAIIHSSYIFLAWMPLC-VMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 +R + +I + + + + +M++ + ++ W ++ T + F Sbjct: 107 TRVVKGSVVIGTGIAGMHYTGMAAMMMNAVILYDW---------LWFTVSIFVAILFSMV 157 Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 A++L Q V + WR + + + + + Sbjct: 158 ALILTFQLRSVDPVEGL--------WRKIFAGLLMGASITGMHYTGMYATTFVAHEHMTI 209 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF----------A 196 P S I +V+ L+ +V + R++ S Sbjct: 210 AVIPYDDSGLIATMIGIVSVLILVVTLASVYVDKQFAGKTLRVLESDQRYKSLFEHNYDG 269 Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 I + D S+ + L +C + + I+ + Sbjct: 270 VIFYSIDGTQSVMNPAAMRLTKEQSLPLEKLKTMCISTDAELISTH-------------- 315 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE 316 F N + C + +G + ++ + + +VR + Sbjct: 316 -----FTNAVQGDARNCDITLTTR--EGCQLHLNMTHTPVFVDQQITGVFMIVRDITNKK 368 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYG 368 + + A D LT LPN R +EQ +Q + L +D+ + ++ G Sbjct: 369 EYEAKINYLAFHDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVYVLFLDLDHFKLVNDSLG 428 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 ++ L + + +Y+L G E +++L+ TE + M N +N + Sbjct: 429 HDFGDLLLQEASLRLRECVGKKGTVYRLGGDEFMVILTDV-TEREVSSMANEINETIEQA 487 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + L + R+ + + L+ A + + + Sbjct: 488 FFIHGHELYITTSIGISRYPEDGQDRSVLMRNAD-AAMYAAKDKGKNSFHLYVPNLEQAV 546 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ + N + AL + + LL+ QP + + G + ++ + G++ PD+F+ + Sbjct: 547 NDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFISVA 606 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL + K K R +VNL L+++ I + + Sbjct: 607 EETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQTR 666 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++P+ + LEITE + + +++L + G +AIDDFGTGY++ LK + +K Sbjct: 667 LAPEYLELEITESSMI-DVHRATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLK 725 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D++ + IV +I +A + V+AE VET+++ A L + + +QGYL Sbjct: 726 IDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLF 785 Query: 722 GRPQPLAD 729 RP P D Sbjct: 786 SRPLPSED 793 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 106/503 (21%), Positives = 204/503 (40%), Gaps = 16/503 (3%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + A L+ + + + + + + + NY L+ + + + + Sbjct: 67 YSAEELLEQMGPLDLILPEQHAFVIEQMQLRAAGVLGHNYELTGLRKDGSTLPIMVLGSP 126 Query: 298 -LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 +I + V + +R A D LT LPN R L + EQ ++ Sbjct: 127 SVIGGLPASVGTVLDISAQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKS 186 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D+ + ++ G + + + R L +++ + L +L G E + + G Sbjct: 187 EIAVIFLDLDHFKRVNDSLGHSVGDELLCEVARRLDSVVRRIDTLARLGGDEFIFAMPGF 246 Query: 409 ETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 T ++ ++ SR L + + + L+ LL ++ Sbjct: 247 HTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAK 306 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEIL 523 A ++ T ++L+ + +R AL Q + +L+ QP+ N E G + ++ Sbjct: 307 EMGRN-AFQFYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALI 365 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPL 582 L + G++ PD+F+ + + L VL + +VN+ P+ Sbjct: 366 RWLHPELGLIMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPV 425 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + + + LE+TE +A+ +M + LH+ G +++DDF Sbjct: 426 QFRQAGFVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDF 485 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR +KID FV D+ T+ D I +I + ++ ++V+AE VE Sbjct: 486 GTGYSSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKV 545 Query: 703 QQQALLHKLGVQYLQGYLIGRPQ 725 +Q ALL K+G QGY RP Sbjct: 546 EQLALLRKMGCDMAQGYYFSRPM 568 >UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ56_DESAC Length = 928 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 101/441 (22%), Positives = 187/441 (42%), Gaps = 17/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 L+ + + + + A D LT L N L +Q K+ L Sbjct: 481 HLIVIGEDITEEKKNAQHFEFLATHDSLTGLANRLLLHDRLDQAILKAKRVHGTVFLILL 540 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL- 414 +D + ++ G ++ I LL +++E++ + +L G E +++LS ET Sbjct: 541 DVDRFKMINDSMGHDNGDRLLQLIADRLLKVVRESDTVVRLGGDEFVVLLSEVETLDDAL 600 Query: 415 --QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ S + + + A + + + LL ++ H Sbjct: 601 CAAEAIHRELSEPFTVSERQIPLTVSAGICSYPDHGMSSLELLRHADVAMYKAKETHSQT 660 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 + E + G + + L +R A+ + +L +Y QP + + G++ +L + D Sbjct: 661 CI--FESSMDGLVLESLELEAELRQAIVKNELHVYYQPKVDAGSEKIVGFEALLRWVHSD 718 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G+++P F+PL Q L L V+E + + L +VNL + Sbjct: 719 RGMISPGVFIPLAEQTGLIHEIGLWVIEDVCRQLRQWADQDYAIVPVAVNLSAKQFQSVD 778 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 +A ++ + YHI E+TE N SS+ +++L G R+A+DDFGTGY++ Sbjct: 779 LAKQVATILDSYHIDSSWFEFELTESMIMQNPLSSIRIMKELKDLGLRLAVDDFGTGYSS 838 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+RL D +KID F+ D+ + + SI +A++ + +AE VET +Q L Sbjct: 839 LNYLRRLPLDYLKIDRSFIDDVTQDLSADAVATSIIGIARSLGMQTIAEGVETAEQLMFL 898 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 ++QG+ RP P+ D Sbjct: 899 KDNNCDFIQGFYFYRPMPVDD 919 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 106/449 (23%), Positives = 191/449 (42%), Gaps = 25/449 (5%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCC 354 + + + + R H A D +T LPN L++ Q K Sbjct: 499 THYIGLHQDVSERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLF 558 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE--- 411 + +DN + ++ G + ++ + L +E++ + +L G E +++S T+ Sbjct: 559 VDLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSA 618 Query: 412 --GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW--LAEQ 464 + L S R N F G QE+++ L+ Q+ + Sbjct: 619 AMQGAEAAARYLLSELGRTFQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIYQAK 678 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEI 522 + V D E+ ++ + +R A+++ LL+ Q + EG + + Sbjct: 679 GAGRNTVRFFDPSMEIA---LRERAAIEEALRYAIEEEQFLLHYQAQIGEDGRIEGAEVL 735 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLM 580 L + G+++P F+PL + VL+ LA G +VN+ Sbjct: 736 LRWQHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVS 795 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + L Q + ++ + + P + LE+TE ++ E+++ ++ L G ++D Sbjct: 796 AVQLRQPDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLD 855 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ LKRL +KID FV+D++ + D I S+ LAK+ L V+AE VE Sbjct: 856 DFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVE 915 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 T+ Q+ LL +G QGYL RP P+ D Sbjct: 916 TEAQRELLAGIGCHCYQGYLFSRPLPIGD 944 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 100/436 (22%), Positives = 171/436 (39%), Gaps = 16/436 (3%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDN 359 + R + + QA D LT LPN LE E S L IDN Sbjct: 376 IARDITERKHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDN 435 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G +R + L ++ + + + G E +VL + +++ Sbjct: 436 FKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAILH 495 Query: 420 ILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + + + + + + + + LL +S A Sbjct: 496 KVRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNR-YQF 554 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIM 533 ++ + + + L +R ALD+G+ L+ QP R+ G + +L G++ Sbjct: 555 YAPEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVI 614 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWL-ATHPCDKKGPRFSVNLMPLTLLQKNIAGR 592 P F+PL+ L VL + A R SVN+ + + + Sbjct: 615 APGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQ 674 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + ++ + + P + LEITE A + ++ + L G R+AIDDFGTGY++ L Sbjct: 675 VEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYL 734 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 KR D +KID F++D + A I + L L VVAE VET +Q A L + Sbjct: 735 KRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRA 794 Query: 713 VQYLQGYLIGRPQPLA 728 +QG+ RP P Sbjct: 795 CDLIQGFHFSRPLPAD 810 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 103/439 (23%), Positives = 184/439 (41%), Gaps = 16/439 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLR 356 L + + E +R A D +T LPN +ALE A + + + Sbjct: 415 LEETTQRMNEQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIFID 474 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + + + L ++ + + +L G E ++VL + H Sbjct: 475 LDRFKNINDSLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISAAH 534 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 V + S+ + L++ + + ET+Q L+ + + + Sbjct: 535 AVRKIQQTLSQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRN-S 593 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + ++ +++L + +RTAL++ +++L+ QP + E G + +L Sbjct: 594 YQFFTQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVR 653 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNI 589 G + PD F+P+ L L+S + LA P R +VNL Q N+ Sbjct: 654 GAVAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNL 713 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + + ++ + LEITE A + +++ ++ L + G +AIDDFGTGY++ Sbjct: 714 PSLLADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSL 773 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK + +KID FV+ I T++ DA I + LA VVAE VET+ Q L Sbjct: 774 SYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLR 833 Query: 710 KLGVQYLQGYLIGRPQPLA 728 LQGY P A Sbjct: 834 GQQCDILQGYFFSEPLSAA 852 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 100/457 (21%), Positives = 186/457 (40%), Gaps = 20/457 (4%) Query: 290 SLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN--------FRALE 341 + + + C VR R + + D LT LPN +A+ Sbjct: 575 PVEVSVTFDAGRAACFSLFVRDLSRRDEAQEHIRRLSHFDTLTGLPNSSLFADLLRQAIG 634 Query: 342 QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 A S + ID+ + ++ G + + I + L +L G E Sbjct: 635 NAQRSGESLSVMYIDIDHFQHINDTLGHRIGDRLLVEIAGRFRNALCAENTLARLGGDEF 694 Query: 402 LLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 L++L + E ++ + + + + + + + E + LL + Sbjct: 695 LILLPHAQVECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRAD 754 Query: 460 WL--AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---- 513 +S + ++ S T + L +R AL++ +L+L+ QP + Sbjct: 755 TATNRAKSDGRNTYRFFAPEMQLRSAHT---LRLETALRRALERNELVLHYQPQIDLVDF 811 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKG 572 G + ++ + G+++P +F+P+ L V+++ L L + Sbjct: 812 GRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQL 871 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 + VNL Q+N+ + R+ + + LE+TE + +++ ++ LH+ Sbjct: 872 GQVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHR 931 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G R++IDDFGTGY++ LKR + D +KID FV+D+ + IV +I LA+ Sbjct: 932 DGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRF 991 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VE +Q A L G Q +QGYL RP P + Sbjct: 992 RTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDE 1028 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 92/413 (22%), Positives = 175/413 (42%), Gaps = 14/413 (3%) Query: 328 TDPLTLLPNFRALEQAP-----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 DPLT LPN L + + +D + ++ G + ++ + R Sbjct: 664 FDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARR 723 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGA 439 L+ ++ + + + G E +LVL G L+ + L S I + L + Sbjct: 724 LVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSL 783 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F + LL + + + + ++ + + + +R+AL Sbjct: 784 GVAVFPRDGNDCDALLRHADAALYHAKSRGRN-TYRFFTREIDDRVSEYLHIEHGLRSAL 842 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 ++G+ L+ QP + G + +L + G+++P +F+P+ + L + V+ Sbjct: 843 ERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVI 902 Query: 557 ESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + + +VNL + ++ I + P+ + +E+TE Sbjct: 903 REACRQAMLWRRAGLRPMTMAVNLSGRQFSR-SVIEAIDEALADSGLDPRWLQVEVTESV 961 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + + + +E L G +A+DDFGTGY++ LKR D +KID F++DI + Sbjct: 962 IMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDED 1021 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +IV +I +A + V+AE VET+ Q L + G +QGYL+ RPQP A Sbjct: 1022 NPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAA 1074 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 94/442 (21%), Positives = 183/442 (41%), Gaps = 16/442 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCC 354 + ++ + + QA D LT L N +AL QA + S Sbjct: 366 GHFVGVLYDVTQIKRYQEDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDHFLSLVF 425 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +DN + ++ G I ++ L +++ + + ++ G E +L+L+ Sbjct: 426 IDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFVLLLTNQSVSDSN 485 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 ++ + + + + + + RF + E + LL ++ + Sbjct: 486 AGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRAKSSGRN 545 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKY 528 + ++ + +++ L + + AL +L L QP R+ G + ++ Sbjct: 546 -NFQFYTKEMNATSGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHP 604 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTLLQK 587 G++ P F+P+ L + VLE+ + L R ++NL L + Sbjct: 605 KRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSARQLSDR 664 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N + + + + P + LE+TE N E + + L+K G ++++DDFGTG++ Sbjct: 665 NFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFS 724 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKR D +KID F+ + ++ DA+I ++I LA + V+AE VE + + Sbjct: 725 SLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSF 784 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L K G QGY I RP D Sbjct: 785 LKKNGCDEGQGYFISRPLTFDD 806 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 108/445 (24%), Positives = 191/445 (42%), Gaps = 19/445 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGK 350 S+SV L+ + +H+++ R+ A D LT LPN + +L QA + Sbjct: 244 PSYSVALISNITPHHQAKQKIRQL---AYFDGLTGLPNRQLFLEHCNSSLTQARRNRSPL 300 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 C + ID + ++ YG ++++ + L M + L +L E V++ + Sbjct: 301 GVCIIDIDRFKGVNDTYGYESGDALLKTVSQRLSDCMSREDVLARLGSDEFAAVIASVGS 360 Query: 411 EGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + I L G F + + LL + Q+ Sbjct: 361 QDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDAEALLKNAATAMHQAKQ 420 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 H + ++ +++ + +R ALD L L+ QP + G + +L Sbjct: 421 HGSN-NFRFFSKGMNRMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLR 479 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLT 583 + G ++P +F+PL + L VLES + R +VN+ Sbjct: 480 WESPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQ 539 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q R+ + +R I+P+ + +E+TE ++ ++ + + G ++AIDDFG Sbjct: 540 FKQAGFIDRLDAIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFG 599 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY+ LK D IK+D FV+DI NT DA I +I +A + + V+AE +ET++ Sbjct: 600 TGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETRE 659 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q A L + QGY GRP P+ Sbjct: 660 QLAFLKDRACEEGQGYYFGRPVPVE 684 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 102/447 (22%), Positives = 188/447 (42%), Gaps = 17/447 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGK 350 + + + + + R A DPLT LPN AL+ A + Sbjct: 498 VGHVTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRV 557 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G +R++ L ++E + L +L G E +++L E Sbjct: 558 AVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEA 617 Query: 411 EG----RLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 +++V +L + N + + + + + L+ ++ Sbjct: 618 PADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAK 677 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGY--DEILA 524 A E+++ T+++ L +R AL+ + ++Y QP+ + E L Sbjct: 678 AQGRNTYGFYTEDLIRS-ATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALV 736 Query: 525 RLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPL 582 R K G +++P F+P+ + L VL + + + +VNL Sbjct: 737 RWKPQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSAE 796 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 +++++ + + + + LEITE E ++ +E+L + G +AIDDF Sbjct: 797 QFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDF 856 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID FV+DI ++ D I +I +A+A ++V AE VE + Sbjct: 857 GTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGE 916 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q LL LG QGYL P P + Sbjct: 917 AQLELLRGLGCGSYQGYLCSPPLPADE 943 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 116/479 (24%), Positives = 204/479 (42%), Gaps = 27/479 (5%) Query: 277 YNQNFLQGVETEYSLAFILAV---LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 +++ L + L ++V ++ CLL R + + + A DPLT Sbjct: 647 HHREMLGRNKRGDILTVEVSVEPITLNEVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTN 706 Query: 334 LPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN L + L +D+ + ++ G + ++ I L Sbjct: 707 LPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEA 766 Query: 386 LMQENEKLYQLPGSELLLVLSGPE-----TEGRLQHMVNILNSR---QIHWNNTGLDMGY 437 ++ + + +L G E +++LSG E E +++ + + L + + L + Sbjct: 767 SVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTP 826 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + T LL + ++ + ++++ + N +R Sbjct: 827 SIGVALIPDHGTTPADLLKRADIALYRAKDSGRN-TTQLFHTTMQKAASERLRMENDLRL 885 Query: 498 ALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL +G+L L+ QP R+ G + +L G P +F+ ++ + L Sbjct: 886 ALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSW 945 Query: 555 VLESLL----KWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 +L+ + L D VN+ P Q + GR++R Y + Q + LE Sbjct: 946 ILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLE 1005 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE N E ++ + +L ++G A+DDFGTGY++ LKRL D +KID FV+D Sbjct: 1006 ITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDA 1065 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + DA IVR+I +A++ L+V+AE VE +Q A L +LG QGYL RP PL + Sbjct: 1066 PVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCHLYQGYLHSRPLPLPE 1124 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 91/434 (20%), Positives = 167/434 (38%), Gaps = 16/434 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 + NR+ AL D LT L N R EQ + L +D + Sbjct: 191 DVSELKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKR 250 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGRLQHMVNIL 421 ++ G ++++ + L ++ + + +L G E ++L+ +T IL Sbjct: 251 INDTLGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQIL 310 Query: 422 NSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + I + + + L+ ++ H E Sbjct: 311 KALKEPIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRDR-YHFYTE 369 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG---YDEILARLKYDGGIMTPD 536 ++ KQ+L+ +R AL + L QP N + ++ G++ PD Sbjct: 370 ELNAHALKQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPD 429 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLAT-HPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+ + + L VL++ + + +VNL + I Sbjct: 430 SFISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEE 489 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + P+ + LE+TE + ++ +++L + G +AIDDFG+GY++ LK+L Sbjct: 490 ALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKL 549 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + +K+D FV+DI ++ D I +I +A L VVAE VET +Q+ L + Sbjct: 550 PVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDF 609 Query: 716 LQGYLIGRPQPLAD 729 QGY +P D Sbjct: 610 AQGYFFSKPLSFED 623 >UniRef50_Q220B0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B0_RHOFD Length = 701 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 102/458 (22%), Positives = 184/458 (40%), Gaps = 25/458 (5%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------- 346 + ++ + + +V + + A D LT LPN R L +Q Sbjct: 237 VSELMHNGQTQFIGLVHDITQRRRSEENIYRLAFYDKLTGLPNRRLLMDRLKQALITSTR 296 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D+ + ++ +GL ++ + + L +++++ + + G E +++L Sbjct: 297 TGQHGALILLDLDHFKQINETFGLDAGDELLQQVGQRLPTCVRDDDTVSRFGGDEFMVML 356 Query: 406 SGPETE------GRLQHMVNILNSRQIHWNNTGLDMGY--GAAWGRFDGNQETLQPLLG- 456 ++ IL + + G G F Q +L LL Sbjct: 357 EALSSQPQEAAIQAEAIAQKILLALAQPYRLRGHTHGTTPSIGVVMFRQAQVSLDDLLKM 416 Query: 457 -QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE 515 ++ ++ + V D + + L +R L + +L+ Q + + Sbjct: 417 TDVAMYQAKAAGRNTVRFFD---PALQALALARTALEENLRRGLALQEFVLHYQIQVDHQ 473 Query: 516 G--EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-- 571 G G + +L G++ P +F+PL + VLES + L + Sbjct: 474 GLPTGAEALLRWQHPVRGMVPPAQFIPLAEETGFILPLGQWVLESACRQLVAWSHQRATG 533 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VN+ L Q + + + +P + LE+TE + + + + L Sbjct: 534 SWTLAVNVSALQFAQPDFVAHVTSALQATSANPTLLKLELTESMLVGDVQDVITKMNALK 593 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G A+DDFGTGY++ LKRL D +KID FV+D++ N DA+I ++I L Sbjct: 594 AQGVSFALDDFGTGYSSLSYLKRLPLDQLKIDQSFVRDLLINPNDAVIAQTIVALGHNLG 653 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET Q L +G QGY GRP P A+ Sbjct: 654 LQVIAEGVETVGQHDYLASIGCDAFQGYYFGRPVPAAE 691 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 102/441 (23%), Positives = 177/441 (40%), Gaps = 27/441 (6%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 R + A D T LPN R L +Q + + +DN + Sbjct: 724 DITRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKT 783 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------PETEGR 413 ++ G ++ + + L + E + +L G E +++L + E Sbjct: 784 LNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETL 843 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC--AHHHV 471 + ++ L + F QET + LL + Q+ + + Sbjct: 844 AKRILASLKQT-YSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNTL 902 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYD 529 D + T + L +R A+ + LLY Q + +G G + +L + Sbjct: 903 RFFDPE---MQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQGHLTGCEALLRWQHPE 959 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQK 587 G++ P +F+ L L VL++ LA + +VN+ Q Sbjct: 960 RGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQA 1019 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + +++ + +PQ + LE+TE + E + + L + G ++DDFGTGY+ Sbjct: 1020 DFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYS 1079 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL D +KID FV++I+ + DA I R + L + L+V+AE VE + Q+ Sbjct: 1080 SLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRDF 1139 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L +LG QGYL RP PL Sbjct: 1140 LARLGCHACQGYLFCRPLPLD 1160 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 87/434 (20%), Positives = 173/434 (39%), Gaps = 16/434 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEF 362 + + R A D LT LPN L++ A + + +D + Sbjct: 605 DISQRKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKI 664 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL- 421 ++ G ++ + L +++ + + + G E ++++ + L ++ + Sbjct: 665 INDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIM 724 Query: 422 --NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 ++ L + + + + LL ++ Sbjct: 725 HALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKN-TFHFYSA 783 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 + + ++ L N++R AL++ + L Q + + G + ++ + G+++P Sbjct: 784 DGNANSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQ 843 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+P+ + + VL+ + + R VN+ + ++ I Sbjct: 844 DFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISN 903 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + ++P + LEITE NAE + ++ G + IDDFGTGY++ LK Sbjct: 904 ALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHF 963 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV+DI ++ D I ++I +A + ++VVAE VETQ Q L G Sbjct: 964 PIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQ 1023 Query: 716 LQGYLIGRPQPLAD 729 LQGY+ RP + D Sbjct: 1024 LQGYIFSRPLVVED 1037 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 108/440 (24%), Positives = 185/440 (42%), Gaps = 23/440 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + + A D LT LPN L + + + +DN + Sbjct: 460 DITERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDLDNFKT 519 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---------PETEGR 413 ++ G + + LL ++E + + ++ G E ++VLS ETEG Sbjct: 520 LNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAASETEGA 579 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + ++ L SR + T F G++ ++ LL Q +S A Sbjct: 580 AEKVLTAL-SRPYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDLAMYKSKESGRN-A 637 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGG 531 + + + ++ L +R A+D+ LL++ Q G + ++ G Sbjct: 638 ICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEALVRWQHPQHG 697 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNI 589 ++ P +F+PL + L +VL++ + LA D+ +VN+ L + + Sbjct: 698 LVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQLRENSF 757 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ R P + LE+TE N E + + L G ++DDFG GY++ Sbjct: 758 VTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGVGYSSL 817 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LKRL +KID FV+D++ + DA+I R+I LA++ L V+AE VETQ Q+ L Sbjct: 818 SYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQRQFLA 877 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 G QGYL RP P+ D Sbjct: 878 DAGCHAYQGYLFCRPLPIED 897 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 96/442 (21%), Positives = 188/442 (42%), Gaps = 16/442 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCC 354 V + + R ++ R+ QA D LT LPN L +++ + Sbjct: 263 VNYIAVFRDISEAKASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASSNDRKSCIALLF 322 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +DN + ++ G ++ ++ + + E + + ++ G E +++L + + Sbjct: 323 IDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVIMLKDLQDKHDA 382 Query: 415 QHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 M + L ++ + + + + + +T L+ ++ Sbjct: 383 AVMADTIINLFAQALTVESHQFTITPSIGIALYPEDGKTPYSLVRNADTAMNKAKQEGRN 442 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ +++ + N +R +Y QP N G + ++ ++ Sbjct: 443 R-YHLFTPGLTESALRRISMENQLRQTASDNGFTVYYQPKVNLHDNTIVGMEALIRWIQP 501 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLL-KWLATHPCDKKGPRFSVNLMPLTLLQK 587 DG I++P +F+PL + L QVLE+ + + + SVNL Q+ Sbjct: 502 DGTIISPAEFIPLAEETGLIVPIGEQVLEAACLDTVELNQRFGTNLKVSVNLSLRQFKQE 561 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I+ + I P + LEITE + E + +E++ K G ++IDDFGTGY+ Sbjct: 562 QLMKNIMDIIAMTAICPSCLELEITESTVMDDIEQTKTILEKMDKLGITLSIDDFGTGYS 621 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK + +KID FV + N D +V++I LA++ LS VAE +ET +Q Sbjct: 622 SLSHLKNMPMHTLKIDQSFVAGLPHNKSDQKLVKAIMSLARSFDLSTVAEGIETPEQYNY 681 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 + +LG + +QGY P PL + Sbjct: 682 MRELGCEVMQGYYYSPPVPLEE 703 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 95/440 (21%), Positives = 183/440 (41%), Gaps = 25/440 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 S+ + + A DPLT LPN L Q + + +D+ + Sbjct: 393 DISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSSRTGKKGALLFVDLDHFKV 452 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-----PETEGRLQHM 417 ++ G ++ L ++ + + + G E ++VL E + + Sbjct: 453 LNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVVLEDLDRNATEAAAIAEQI 512 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCAHHHVL 472 N + S + F G++ ++ LL Q + + + Sbjct: 513 GNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLLKQADISMYQAKKAGRNTLR 572 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDG 530 D + + + + L + +R A+++ L LY Q N+ G + ++ + + Sbjct: 573 FFD---PAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQRMVGAEALIRWIHPER 629 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKN 588 G ++P +F+P+ + L V+ + LA +KK +VN+ + Sbjct: 630 GTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSAHQFRALD 689 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + I + LE+TE + + + + L G ++++DDFGTGY++ Sbjct: 690 FVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLDDFGTGYSS 749 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK+L D +KID FV+D+ + DA++V++I DLA ++V+AE VET+ + +L Sbjct: 750 LSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVETELELDIL 809 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 G + QGYL GRP P+ Sbjct: 810 KGYGCRLYQGYLFGRPVPIE 829 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 104/450 (23%), Positives = 187/450 (41%), Gaps = 15/450 (3%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-- 351 + V + ++ +V+ R QA D LT LPN L+ EQ + Sbjct: 612 LAPVRAAGDAHVVCVVKDVTERVLYLRELERQAKYDGLTGLPNRYLLDDRLEQAIVAARR 671 Query: 352 ------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + +D+ + ++ + G +R L ++++ + + G E +++L Sbjct: 672 HERLLGVAFIDLDHFKVVNDNVGHRQGDELLRQAASRLAAVLRDGDTAARQGGDEFVVLL 731 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 E ++ L + ++ + + + LL Sbjct: 732 PDLGDERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRDGGDGDTLLKHADIAM 791 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 Q+ A + E ++ Q ++ L +R+AL+ G+L L QP + + G Sbjct: 792 YQAKAAGRNVVRFFTAE-MNIQVRDRLQLEGALRSALENGELHLAFQPQVDGGSGQVIGA 850 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNL 579 + +L + G + P +F+PL + L VL + + + R +VN+ Sbjct: 851 EALLRWQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAGRRLRIAVNV 910 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 ++ RI + + P + LE+TE +AE + + +L + G +A+ Sbjct: 911 SARQFRSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGVSLAL 970 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY+++ L+R D +KID FV+ +V IV +I LA + + V+AE V Sbjct: 971 DDFGTGYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIAEGV 1030 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ET QQ L + G LQGYL GRP P A+ Sbjct: 1031 ETPLQQRQLFEFGCDELQGYLFGRPVPAAE 1060 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 110/460 (23%), Positives = 184/460 (40%), Gaps = 19/460 (4%) Query: 283 QGVETEYSLAFI-LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL- 340 QG +L + C + + R H A TD LT LPN +L Sbjct: 386 QGYTFPVALTITTVTGEDGRVECYINTFSDISERKANEARIHDLAHTDTLTGLPNRMSLY 445 Query: 341 ---EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 E+ L +DN + ++ G + + + R L+ + E + +L Sbjct: 446 SGLEERLANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLG 505 Query: 398 GSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++VL P+ + + + R L G + L Sbjct: 506 GDEFVIVLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSL 565 Query: 455 LGQ---LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L + A+ S ++ E + Q +++ + N +R A+ + + L+ QP Sbjct: 566 LKNIDTAMYAAKSSGKNN----FKFFTEKMREQINERMQMENHLRQAILRNEFELHYQPQ 621 Query: 512 RN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + ++ + G++ P+KF+ + + NL VL + ++ Sbjct: 622 VDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSR 681 Query: 569 DK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + SVN+ L + + I L + I P + LEITE + E ++ + Sbjct: 682 QGLEAVCISVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRM 741 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 ++L G +AIDDFGTGY++ LK L +KID FVKDI T+ DA I + LA Sbjct: 742 KELKNKGVALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALA 801 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + L +VAE VET+ Q L G QGY +P P Sbjct: 802 RTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYFSKPLPA 841 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 99/437 (22%), Positives = 182/437 (41%), Gaps = 24/437 (5%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------QEAGKSFCCLRIDNLE 361 + R+ R E R AL DPLT LPN L E G + + +D+ + Sbjct: 435 LGRVVER-ELAQGRLTHHALHDPLTGLPNRVLLLDRLEVALAQRSRGGVAVAFVDLDHFK 493 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G I + L +++ + + + G E +++ E ++ + L Sbjct: 494 LINDSLGHAAGDTVITAAATRLRAVVRPGDTVARFGGDEFVVLAESVVDERDVEGLAERL 553 Query: 422 N---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL---GQLSWLAEQSCAHHHVLALD 475 + + + G LL + A+++ H + Sbjct: 554 AGALAEPFDLAGDEVFVTASIGIAVSSGTGGDAHGLLRDADAAMYRAKEAGRARHEVF-- 611 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILARLKYDGGI 532 + ++ +++ ++N + AL++ +L+ QP + G + +L + + G+ Sbjct: 612 --DSVMRAGAIRRLEIVNDLHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGL 669 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLLQKNI 589 + P +F+P+ + L VL + + T D++ SVNL L Q + Sbjct: 670 IPPLEFIPVAEETGLINDLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRL 729 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 A + + ++LEITE ++ ++++ +E L + G R+AIDDFGTGY++ Sbjct: 730 AEEVAAALEDSGFPADQLVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSL 789 Query: 650 ERLKRLQADIIKIDGVFVKDIVT-NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L+R DI+KID FV + + N ++ + R+I LAK L VAE VE + L Sbjct: 790 TYLQRFPIDILKIDKSFVDGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVREL 849 Query: 709 HKLGVQYLQGYLIGRPQ 725 L QGY RP Sbjct: 850 QSLHCDIGQGYFFARPL 866 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 176/449 (39%), Gaps = 19/449 (4%) Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK---- 350 L L ++ M + + L D LT LPN L EQ + Sbjct: 950 LGKLADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKRKQQQ 1009 Query: 351 -----SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D + ++ G ++ +++I L ++ + + + G E +++L Sbjct: 1010 PNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEFVILL 1069 Query: 406 SGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 M + ++T L+ Sbjct: 1070 EDLTIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNADIAM 1129 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 +S + ++ Q T+ + L +R AL++ + ++Y QPI N+ G+ Sbjct: 1130 YRSKEAGRAR-YTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRNLLGF 1188 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KKGPRFS 576 + ++ + + G+++P F+P+ + L VL + + + R S Sbjct: 1189 EALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVS 1248 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL L Q N+ RI + + + + LEITE +N E + Q+ + Sbjct: 1249 VNLSGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQ 1308 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTGY++ L L D +KID FV + + IV +I LA + VVA Sbjct: 1309 VSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVA 1368 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 E VET+Q L +LG ++ QGY +P Sbjct: 1369 EGVETEQHLRQLQQLGCEFGQGYFFSKPL 1397 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 106/445 (23%), Positives = 202/445 (45%), Gaps = 21/445 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGK 350 IS V + + RS+ R A DPL+ LPN ALE++ ++ Sbjct: 305 ISHYVAVFSDITALKRSQ---RELDYLAHHDPLSNLPNRLLFTERIAHALERSKSEQLRG 361 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV----LS 406 + + +D+ + ++ G + ++S+ L + L +L G E L+ Sbjct: 362 AVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLARLGGDEFGLLSETCAD 421 Query: 407 GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 P+ Q+++ L + + L +G F + ++++ +L ++ Sbjct: 422 APQAAELAQNLLRCLEA-PFRLDEHELYIGASIGISLFPDDADSVEQVLRNADSALFKAK 480 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEIL 523 + + ++ ++V L +++R ALD +L ++ QP+ + E G + ++ Sbjct: 481 SSGR-EGYAFYVQELTDYARQRVELASSLRHALDNHELRVFYQPLHDLENGNPVGMEALV 539 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF-SVNLMPL 582 G++ P +F+P+ + D VLE + + RF +VN+ Sbjct: 540 RWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEGSALRFVAVNVSSR 599 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + + ++ ++ +SPQ + LE+TE + ++++ + +L G R+AIDDF Sbjct: 600 LFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLTRLRALGVRLAIDDF 659 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ RLKRL D +K+D FV+ + + DA I R++ L + L+V+AE +E+ Sbjct: 660 GTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLGLNVLAEGIESP 719 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPL 727 Q L LG Y QGY GRP P+ Sbjct: 720 AQVDFLRALGCDYGQGYHFGRPAPV 744 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 18/440 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 F L ++ + R H A D LT LPN ++ + Sbjct: 401 GFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLA 460 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG---- 407 + ID + ++ G ++ I L ++E + + + G E +L+L+ Sbjct: 461 VAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRM 520 Query: 408 PETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + Q ++ L + ++ L + + G+ T + LL S Sbjct: 521 EDANDVTQRILKKLKE-PVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKE 579 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 V + +Q+L +R AL+ +L+LY QP N G + +L Sbjct: 580 SGRD-NYHFYSSTVQEKAYEQLLEEMYLRRALENRELVLYYQPQVNIATGRLVGMEALLR 638 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLT 583 G+++P +F+PL D VL + K +A +VN+ T Sbjct: 639 WKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHT 698 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 ++N+ + + +SP A+ LEITE A N ++++Y + +L G +I IDDFG Sbjct: 699 FGRENLIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFG 758 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TG+++ L + +KI F+ ++ + ++ IV+++ +AK+ L+V+AE VET + Sbjct: 759 TGFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDE 818 Query: 704 QQALLHKLGVQYLQGYLIGR 723 Q L L QGYL + Sbjct: 819 QFEFLQGLQCDEFQGYLCSK 838 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 107/445 (24%), Positives = 181/445 (40%), Gaps = 27/445 (6%) Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRID 358 + R + + A D LT LPN R L + + + +D Sbjct: 379 GVGRDITGRKQAEGQIERLAFYDALTGLPNRRLLLDRLQHATVAVTRSNTQGALLFIDLD 438 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL---- 414 N + ++ G H ++ + L ++E + + + G E +++L+G Sbjct: 439 NFKSLNDTLGHDAGDHLLQQAAQRLKACVREVDTVARFGGDEFVVLLAGLSAAAAQASAE 498 Query: 415 -----QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS--WLAEQSCA 467 +H+ L + F + LL Q ++ Sbjct: 499 AAQVAKHIAASL-GQPYALGGAVHHSTPSIGIALFGPQACRVDELLKQADLAMYQAKAAG 557 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILAR 525 + D + + + L +R L Q +L+L+ QP+ + +G G + ++ Sbjct: 558 RNTQRFFDPE---MQAAASHRSALEADLRRGLQQRELVLHYQPMVDGQGRLQGAEALVRW 614 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK--KGPRFSVNLMPLT 583 G+M P +F PL Q L VLE+ L + SVN+ Sbjct: 615 NHPQRGLMPPAEFTPLAEQTGLILPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQ 674 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q + +++ + +P+ + +E+TE ++ + + ++QL G A+DDFG Sbjct: 675 FRQADFVQQLLATLEASGANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFG 734 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ +LKRL D IKID FV+D+ + D IVRSI LA++ L+VVAE VET+ Sbjct: 735 TGYSSLSQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRA 794 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q L G Q QGY GRP P Sbjct: 795 QLEFLQHHGCQTFQGYHFGRPMPPE 819 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 104/436 (23%), Positives = 183/436 (41%), Gaps = 23/436 (5%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA-------GKSFCCLRIDNLEFM 363 + + QA D LT LPN L Q E A + L +DN + + Sbjct: 281 DVSELKRKEAQIVHQATHDELTGLPNRMGLRQRMEDHALKGGPDARLAVLYLDMDNFKTV 340 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS---GPETEGRLQHMVNI 420 + G + +R++ L+ + + + +L G E +++L + E I Sbjct: 341 NDSLGHAVGDELLRAVAGRLVGMAPRRDMVARLGGDEFVVLLPLSAEGDGELAETESARI 400 Query: 421 LNSRQIHWNNTGLDM----GYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALD 475 +S +N ++ G + DG + TL + A++ Sbjct: 401 QDSFTRPFNAADHELYVMPSIGISVAPEDGRDPATLLKNAEIAMYRAKEQGGAR----FR 456 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYDGGI 532 + ++ T+++ + +IR L+ + +++ QP I + G + ++ + DG + Sbjct: 457 RFTQAMNDDVTRRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQVTGMEALVRWARPDGTL 516 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGR 592 + P +F+P+ L +VL + R +VN+ Q ++ R Sbjct: 517 VPPLEFIPVAEDTGLVVALGERVLRDACIQTRRWTDELGPLRIAVNISARQF-QPDLLDR 575 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + + P + LEITE + +S+ +E+L G IAIDDFGTG+++ L Sbjct: 576 VQAALAESGLPPSQLELEITETTMMRDLPTSVAILERLAAQGISIAIDDFGTGHSSLYYL 635 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 K D IKID FV+D+ + DA IV +I + + SL+VVAE VET Q L G Sbjct: 636 KNFPIDTIKIDRSFVRDVPGDEGDATIVSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHG 695 Query: 713 VQYLQGYLIGRPQPLA 728 + +QGY +P P Sbjct: 696 CREVQGYYYSKPLPAD 711 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 95/432 (21%), Positives = 174/432 (40%), Gaps = 19/432 (4%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEF 362 + +R A D LT LPN + EQ + CL +D + Sbjct: 569 DITERKASEQRIAYMARHDVLTGLPNRTVFHEHLEQRLAEVRRGRGQAALLCLDLDRFKS 628 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + I L ++ + + +L G E +++S + + + + Sbjct: 629 INDMLGHPAGDELLCQIATRLRATVRGGDVVVRLGGDEFAIIVSHLDHARQASVLAQRVI 688 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + +G N +T + L ++ A E Sbjct: 689 DAVGQPLDLGGHLVTVGISIGIAFAPTNGDTSETLFKNADLALYRAKASARN-TYCFYEA 747 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 + ++ L +R A+ G L+ QP+ + G++ ++ G++ PD Sbjct: 748 GMDAAVEARMQLEFEMREAITCGSFALHYQPVLRLADHRIVGFEALMRWPHPKRGMIAPD 807 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 +F+P + L L+ + A+ P R +VN+ + Q + ++ Sbjct: 808 EFIPSAEETGLIVPLGSWALQEACREAASWPDH---LRIAVNVSAVQFQQPGLEQGVMSA 864 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++P ++LE+TE +AE+ + + +L G RIA+DDFGTGY++ L+R Sbjct: 865 LAASGLAPHRLVLEVTESVLVQDAEAVIACLHRLKSLGVRIALDDFGTGYSSLSYLRRFP 924 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D IKID F+ +I + A IVR++ +A +V AE VET Q + G + Sbjct: 925 FDRIKIDRSFISEIG-DPGAAAIVRAVVGIAMQLGATVTAEGVETTAQLEQVRSEGCMEV 983 Query: 717 QGYLIGRPQPLA 728 QGYL+ RP P Sbjct: 984 QGYLVSRPLPAD 995 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 106/469 (22%), Positives = 191/469 (40%), Gaps = 23/469 (4%) Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + L T + ++ ++ + R + H QA DPLT LPN Sbjct: 233 EEELPVNITPLPITWLHHQIVPLGDGIAITARDISERKQKEAELHRQAFYDPLTELPNRT 292 Query: 339 ALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 Q+ + L +D + ++ G ++ +++I R L ++E Sbjct: 293 YFMNRLTKVLERAGRRQDFHYAVFFLDLDRFKVVNDSLGHLLGDEFLKAIARRLSSCLRE 352 Query: 390 NEKLYQLPGSELLLVLS---GPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDG 446 + + +L G E ++L P+ R+ + + S L Sbjct: 353 EDMVARLGGDEFAILLEELSNPDIVHRIAERLQRVLSAPFTLKQHELFTTASIGIALGTS 412 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 E + +L Q+ + ++ + + K+ L + +R A+++ + L Sbjct: 413 YYEQPEAILRDADIAMYQAKTQGKARHIIF-DQAMHTRAVKRWQLESDLRWAIERREFCL 471 Query: 507 YAQPIRNKEGE---GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 QPI + + E G++ ++ G ++P +F+ + + L VL + L Sbjct: 472 VYQPIVSIQTERLIGFEALVRWHHPQRGWISPAEFISVAEETGLIIPLGHWVLWEGCRQL 531 Query: 564 ATHPCD-------KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + SVNL Q ++ I ++ ++ + + LE+TE Sbjct: 532 RQWQSQFNLSPTAEPPLTVSVNLSSKQFCQPDLIHYIQQVLQQTGMEGTCLKLELTESIL 591 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N ++ + QL + G ++A+DDFGTGY++ L R D++KID F+ I T + Sbjct: 592 MENLSTATSLLVQLKELGIQLALDDFGTGYSSLSYLHRFPLDVLKIDRSFINGIEAETEN 651 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 IVR+I LA++ +L VVAE VETQ Q L L Y QGYLI RP Sbjct: 652 LEIVRTILSLARSLNLQVVAEGVETQAQLDHLQALQCGYAQGYLISRPL 700 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 134/747 (17%), Positives = 263/747 (35%), Gaps = 73/747 (9%) Query: 17 AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNL 76 L + +S +A + + F+ ++ L+ ++ G + + C + + Sbjct: 87 PRHLHAFFPPVEHVLSGVATVIVAAAFMRYLTGDFFLARNYL-GIGITLTLSCYIATFSW 145 Query: 77 WNFHLS----------FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 W +++ + + +V + R + G Sbjct: 146 WADYITTNPASKFGQTWCDVLFHTIAALLLVFPTWHLFRHRTG----------------- 188 Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 WL + I ++ L + + IFT + + + L Y Sbjct: 189 WLRNI----ICFALVCFFLTETLKLVDIAYGERYEYIFTPIRRSFNLIGIYV---LGYVY 241 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R S RR A + EKR TL + + L+ GYL + Sbjct: 242 IREQESRR------RRATAKVVESEKRYRTLVENVNMG--ISLIDGNNRIVMNNGYLEKM 293 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF--------ILAVL 298 F G+ Y CL + V E L+ Sbjct: 294 FRKNAEKLTGRFCYQEFENRDECCDNCLGVEAMTTGRAVSREVERILDDGEPSGLRLSAF 353 Query: 299 ISFSVC-----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPE 345 F+ + +V + + A D LT LPN +A+ A Sbjct: 354 PVFNEQGKATKFIKVVEDITDRKRAEEKIRRLAYYDSLTGLPNRPLMMDRLSQAIRHARR 413 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ G + ++ + L +E++ L +L G E +++ Sbjct: 414 HGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAARLSGCTRESDTLARLGGDEFVIIA 473 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G + + + + + L + F + + LL + Sbjct: 474 PGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIGIVLFPSDGGNGEMLLQRADMAM 533 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 + + ++ + ++ L +R AL G+ L QP N + G Sbjct: 534 YAAKDRGGN-SYRFFSAEMNTRAVERHELEEDMRQALTNGEFFLMYQPQVNTGTWKVVGV 592 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + ++ G++ P +F+P+ + ++ VLE + A D P + VN Sbjct: 593 EALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEACRQGAQWQHDGLPPLQMGVN 652 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L + I G + + ++ + + + +E+TE ++E+++ + QL G R+A Sbjct: 653 LCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLM-DSETAVSTLGQLKALGVRLA 711 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY+++ LK D IKID F++DI + + I+ +I +A++ V+AE Sbjct: 712 IDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVAVARSLGPEVLAEG 771 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQ 725 VET++Q L + +QG+ RP Sbjct: 772 VETEEQLRYLMSITCADIQGFYFSRPL 798 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 95/443 (21%), Positives = 191/443 (43%), Gaps = 18/443 (4%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 + + +++ + + DPLT LPN +A++ A + + C Sbjct: 836 HYIAVFTDISQAKESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVLCF 895 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ +G ++ +R I L ++E++ L +L G E +L+L R+ Sbjct: 896 DLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDVADSHRVT 955 Query: 416 HMVN-ILNSRQIHW----NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 M IL+ Q + + + + + LL + ++ H Sbjct: 956 MMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSALYRAKQHGR 1015 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 EE ++ Q ++V L +R AL++ + +Y QP + + G + ++ Sbjct: 1016 ARFAYYNEE-MTEQAQERVQLSFHLRQALEKKEFAVYYQPQVDLGTGQIVGAEALMRWNS 1074 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQ 586 + G++TPD+F+PL + +L + + +VNL + + Sbjct: 1075 PELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAVNLSAVQFAE 1134 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 ++IA R+ + + + LE+TE + ++ ++ L++ G R+A+DDFGTGY Sbjct: 1135 EDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRLALDDFGTGY 1194 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK ++K+D F+ D+ + D +V +I + ++AE VET Q+ Sbjct: 1195 SSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAEGVETVAQRD 1254 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L +LG Y QGY P P + Sbjct: 1255 CLAQLGCDYYQGYYCSPPVPACE 1277 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 103/441 (23%), Positives = 186/441 (42%), Gaps = 21/441 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLR 356 L + R S+ R+ L A D LT LPN AL A + L Sbjct: 411 FLVLCRDITESKQAERKIQLLAHFDSLTGLPNRVLLTDRCNLALSAAQRNGTPLALLLLD 470 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D+ + ++ G + + ++ L ++E + + +L G E +LVL G Sbjct: 471 LDHFKNVNDSLGHRVGDEVLIALAGRLKGAVREQDTVCRLGGDEFILVLPETNAAGAAHI 530 Query: 417 MVNILNSRQIHWNNTGLDMGY--GAAWGRFDGNQ---ETLQPLLGQLSWLAEQSCAHHHV 471 +L S + + ++ F G+ +TL + A++ +++ Sbjct: 531 AEMLLQSALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRNNYR 590 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + ++ + + L N +R AL++ L L+ QP + G + +L Sbjct: 591 FF----TAEMQARSERTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHP 646 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQK 587 + G + P +F+P+ L VL + ++ L SVNL + Sbjct: 647 ELGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHA 706 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 ++ + + + + LE+TE A ++ ++ + LH+ G R++IDDFGTGY+ Sbjct: 707 DLPELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYS 766 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+ + IKID FV+DI ++ D IV +I +A + + +AE VET+ Q Sbjct: 767 SLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEF 826 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G +QGY RP P+ Sbjct: 827 LKAKGCTEVQGYYFSRPLPVE 847 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 112/474 (23%), Positives = 199/474 (41%), Gaps = 26/474 (5%) Query: 274 LLNYNQNFLQGVETEYSL-AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLT 332 L + N L+ +E + AF V S L + R A D LT Sbjct: 353 LSDRNWRHLKADGSEIEIIAFGRRVAFERSDGFLVAIVDVTERRKAEARIAHMAHHDGLT 412 Query: 333 LLPNFRALEQAPEQ-------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN ++ + E + C+ +D + ++ +G + ++ + L Sbjct: 413 NLPNRSFYQERLQHALEARPAECHVAVLCVDLDLFKNVNDSFGHPVGDRLLQLVAERLRL 472 Query: 386 LMQENEKLYQLPGSELLLVL----SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAW 441 ++ + +L G E +VL S E ++ L S + + +G Sbjct: 473 EVRGANMVARLGGDEFAIVLVSVVSPNEASDFAARVIERL-SVPYDVDGLEVVIGASIGI 531 Query: 442 GRFDGNQETLQPLLGQLSWL---AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 G+ + + LL A++S +H E+ + Q K+ + +R A Sbjct: 532 ALSPGDGDNGEDLLRNADMALYRAKESGGGNHHFF----EKEMDRQAQKRRDMEIDLRYA 587 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +G LY QP+ + G++ +L + G+++P F+P+ L V Sbjct: 588 FAKGQFELYYQPLVDVARDRVAGFEALLRWRHPERGMISPADFIPVAEDIGLIVGLGEWV 647 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 L AT P + + +VNL P+ +N+ +I + +SP+ + LEITE Sbjct: 648 LRQACAEAATWPSE---IKIAVNLSPVQFRSRNLVQAVIGALAQSGLSPRRLELEITESV 704 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 + E+++ + Q+ G RI++DDFGTGY++ L+ D IKID FV+D+ Sbjct: 705 FLAETEANLATLHQMRDLGVRISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVQDLAQRPD 764 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I L ++ +++ AE VETQ Q L + G +QG+L +P + Sbjct: 765 CLAIVRAIAGLGRSLNITTTAEGVETQAQLDWLREEGCNEVQGFLFSPARPAGE 818 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 89/442 (20%), Positives = 175/442 (39%), Gaps = 21/442 (4%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + + R A D LT LPN R + L +D Sbjct: 424 IFSDITERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDL 483 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + + ++E + + +L G E ++L + + + Sbjct: 484 FKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAE 543 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + + ++ L + + + T++ L+ ++ + Sbjct: 544 RVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRN-SYQL 602 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIM 533 ++ ++ +++ + +++R AL + + L Q + E G + ++ + G++ Sbjct: 603 YTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLV 662 Query: 534 TPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGR 592 +P F+PL + + VL + + R +VN+ ++ ++ Sbjct: 663 SPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEV 722 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + R + + PQ + LE+TE + + ++ L G RI+IDDFGTGY++ L Sbjct: 723 VARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYL 782 Query: 653 KRLQADIIKIDGVFVKDIVT-----NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 KR+ D +K+D FV DI A IV +I +LA L +AE VET +Q Sbjct: 783 KRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEF 842 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G +QGYLI RP D Sbjct: 843 LRSKGCDEVQGYLISRPVSGED 864 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 98/443 (22%), Positives = 183/443 (41%), Gaps = 17/443 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCC 354 + + A D LT LPN AL QA + Sbjct: 247 THFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVLF 306 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLSGPET-EG 412 L +D + ++ G + +++ L + + + + + G E +++L + + Sbjct: 307 LDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLPDIDDVQE 366 Query: 413 RLQHMVNILNSRQ--IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 ++ I+++ + L + F + + L+ ++ Sbjct: 367 AVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDGRDTETLIKNADMAMYRAKEQGR 426 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLK 527 + Q +++ + N++R AL + + LY QP I+ + + ++ Sbjct: 427 SR-YHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLEALVRWQN 485 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQ 586 + G++ P++F+PL L VL + T P R +VN P Q Sbjct: 486 PEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQ 545 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + + ++ ++P + LE+TE N E ++ + +L G I+IDDFGTGY Sbjct: 546 PRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDFGTGY 605 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ +K+L +KID FV DI TN DA I ++ +A++ L+V+AE VET +Q Sbjct: 606 SSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETLEQMK 665 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 LL L +QGYL +P P+A+ Sbjct: 666 LLDGLNCPEMQGYLFSKPLPVAE 688 >UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KC5_SACD2 Length = 823 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 104/440 (23%), Positives = 187/440 (42%), Gaps = 18/440 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLR 356 + V + A DPLT LPN R + A E+++ + + Sbjct: 372 YVGSVLDVTELKNAQHELEKLAYYDPLTHLPNRRYFKDYLVKQLQLAKEEDSIMAVLLVD 431 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +DN + ++ G + + + + + + ++ G E LVL + ++ Sbjct: 432 LDNFKRINDTLGHDAGDILLSVLAGRIKQRLHSQDLVARMGGDEFYLVLRNLSSLAEVEK 491 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + S I N +++ + N +T + L+ ++ Sbjct: 492 ITKRVRSVLASPIRIKNHFVEITASIGVASYPENCDTPEELMRNADIALYKAKGDGRNRV 551 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDG 530 E + Q ++ L + +R A+ +Y QP + + + ++ + Sbjct: 552 AYFSAE-LDSQLRDKMRLESKLRQAVSCEAFEIYIQPQYDYKTSKFRWAEVLIRWEDPEE 610 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF---SVNLMPLTLLQK 587 G + PDKF+ L + + D VL + K A H + S+NL K Sbjct: 611 GFIPPDKFIKLAEETGIINDIDQWVLRATCKLWAEHGEALRAIGIEGVSMNLSARQFYSK 670 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + +F+ Y I+P + EITE N E ++ +E+L G RI+IDDFGTGY+ Sbjct: 671 TLFAYVEAVFEEYGINPSCISFEITESMVIENIEGAIETMERLRNIGSRISIDDFGTGYS 730 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL D +KID F+ DI +T D I +I +A+ +LSV+AE +ET++Q Sbjct: 731 SLSYLKRLPIDSLKIDRSFIMDIPGDTNDVAITSAIIAMAEKLNLSVIAEGIETKEQCEF 790 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 L + G ++QGY +P P+ Sbjct: 791 LVEQGCFHMQGYYFAKPAPV 810 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 98/453 (21%), Positives = 187/453 (41%), Gaps = 24/453 (5%) Query: 293 FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE------- 345 + ++ + + + A D LT LPN + E Sbjct: 235 VVARAADGRALRFIGTQIDITARKAAEGQVAHMARHDGLTDLPNRALFYERLEIRLADLH 294 Query: 346 -QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + CL +D + ++ G +R++ + +++ ++ + +L G E ++ Sbjct: 295 LNGGACAVLCLDLDRFKTVNDSLGHAAGDFLLRAVAHRIRAVLRADDMVARLGGDEFAVL 354 Query: 405 LSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 ++ + R + + L + I + L +G + + + L + Sbjct: 355 VADADDPARAETLAARLIAAVQAPIPFGKRRLKVGLSVGIAQAPSHGFDSETLFRRADLA 414 Query: 462 ---AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE- 517 A+ + H + E + + L +R A++ +L+LY QP + Sbjct: 415 LHRAKTEGRNTHRVF----EPAMDEAEAARRDLERDLRQAIEGDELILYYQPQVSTGTGR 470 Query: 518 --GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRF 575 G++ ++ G++ P+ F+PL + L VL + + A + Sbjct: 471 LLGFEALVRWEHPTRGLVPPNAFIPLAEESGLILPLGEWVLRAACREAARWA---HPLKV 527 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL P Q ++ R++ + ++P + LEITE ++ ++ + +L FG Sbjct: 528 AVNLSPRQFQQADLPERVLAILTETGLAPTRLELEITETLIINDMARALGILRRLKAFGV 587 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 IA+DDFGTGY++ L+ D IKID FV + + A+IVR++ L ++ +SVV Sbjct: 588 SIAMDDFGTGYSSLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVV 647 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET Q L QGYLI +PQP+ Sbjct: 648 AEGVETDAQMRFLAAEACDEAQGYLISKPQPIE 680 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 94/437 (21%), Positives = 177/437 (40%), Gaps = 15/437 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCC 354 + + + QA D LT LPN +A+ QA Q+ + Sbjct: 882 THFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFLAIDRLKQAILQADRQKKRVAVMF 941 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +D+ + ++ G ++ + + L +++++ + +L G E L++L Sbjct: 942 IDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGDEFLIILPNLRETHHC 1001 Query: 415 QHMV-NILNSRQIHWNNTGLD--MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + IL+S + +N + + + + + L+ A Sbjct: 1002 KLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLMRNAD-AAMYLGKRGGR 1060 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 ++ + ++ + +R AL + + L QPI + + G + +L Sbjct: 1061 NDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAEALLRWNNP 1120 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 + G ++PD+F+ + + L + V+ + + +VNL P + Sbjct: 1121 ELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGSPIWVAVNLSPRQFRESK 1180 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I I+ + LEITE+ + S IEQLH+ FR++IDDFGTGY+ Sbjct: 1181 LLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSA 1240 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L + + +KID F+ DI N +V++I + L V+AE VET +Q +L Sbjct: 1241 LSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLKLQVIAEGVETTEQANIL 1300 Query: 709 HKLGVQYLQGYLIGRPQ 725 G Y QGY RP Sbjct: 1301 EAEGCDYAQGYFFSRPL 1317 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 102/435 (23%), Positives = 178/435 (40%), Gaps = 16/435 (3%) Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNL 360 V + H QA D LT LPN +AL A + + L +D Sbjct: 634 VEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFLDLDRF 693 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + ++ + + LLP ++E + + + G E L+L +T + Sbjct: 694 KVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPHVQTPADSVKIAER 753 Query: 421 LNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L + L + + + E LL A L Sbjct: 754 LLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNAD-AALYRAKEEGRNGLYCY 812 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMT 534 M++ + + + L + + AL+Q +L +Y QP N E + ++ G+++ Sbjct: 813 TPMLNSRGHELLALESELHKALEQQELDVYYQPQINAATGEILRLEALVRWQHSQLGLVS 872 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P F+ L + L VLE+ G +VNL Q ++ ++ Sbjct: 873 PQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGFPGLGTAVNLSVRQFQQPHLVQQV 932 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + ++ + LEITE A N + + +L + G IA+DDFG+GY++ L+ Sbjct: 933 AETLQYTGLAADRLELEITETTAMQNVNLTRTLLHELDQMGVGIALDDFGSGYSSLNYLR 992 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + IKID F++++ + D IV+++ L + +LSVVAE VE+Q Q +L LG Sbjct: 993 QFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLNLSVVAEGVESQSQLKVLRSLGC 1052 Query: 714 QYLQGYLIGRPQPLA 728 +QGY G P A Sbjct: 1053 DIIQGYFFGPPIAAA 1067 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 118/520 (22%), Positives = 212/520 (40%), Gaps = 23/520 (4%) Query: 229 LLCTPYENDFIAGYLVPVFFIIFTLGVGKL--RYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 + P ++ V I+F++ + + +Y + A++ N+ Q+ + Sbjct: 277 QILAPANLEWKINLSVMAVVILFSVLLARFFGQYTLVKPLAALAQASH-NFGQDQPWQLP 335 Query: 287 TEYSL-AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-------- 337 ++Y A I + +F+ + +R A D LT L N Sbjct: 336 SQYCQPAEIEQLSATFTTMTQRLENSRAIQLQSEQRLEHLATHDELTGLANRTLLLDRLD 395 Query: 338 RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 A+E+ Q + + +D + ++ G + I + L ++ + + +L Sbjct: 396 HAIEEGMRQHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKRLCQHVRSTDTVSRLG 455 Query: 398 GSELLLVLSGPETEGRL----QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E LVL E L Q ++ ++S H +N + + F + Sbjct: 456 GDEFALVLGDLNNEESLIPLMQDLLKEISS-PCHIDNHHIVVTASIGISLFPNDGNDSIT 514 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL QS H S + ++ K + L +R AL++G+LLL+ QP + Sbjct: 515 LLRNADLAMYQSKRHKGDFTFYSSD--MNQHAVKILELEKDLRQALERGELLLHYQPKVS 572 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD- 569 + G + ++ G+++P F+PL + L VLE + + Sbjct: 573 LQSGKIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWVLEQACQQAISWQQQQ 632 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VNL N+ + + + + P + LEITE + E ++ + Sbjct: 633 LPTITMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMIA 692 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G +++DDFGTGY++ L+R D +KID F++D+ ++ A + SI D+A Sbjct: 693 LKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAHH 752 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L+ VAE VET +Q L K LQGYL RP P D Sbjct: 753 LGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAED 792 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 101/440 (22%), Positives = 174/440 (39%), Gaps = 16/440 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCL 355 + + + R A D LT LPN L+ A + L Sbjct: 420 HYIGIFSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRNSTQAAVLFL 479 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + +R + + L ++E + + + G E ++VL E Sbjct: 480 DLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIVLPDLEHGQDAG 539 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + + L + + G+ LL ++ A Sbjct: 540 TIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMYRAKADGRN- 598 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYD 529 ++ + ++LL + +R ALD+ +L LY QP N EG + +L D Sbjct: 599 GFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEALLRWQHPD 658 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKN 588 G++ P +F+P + L VL + L P +VNL ++ Sbjct: 659 LGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLSGQQFAHQD 718 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 I + + + + LE+TE + E ++ + +L G +AIDDFGTGY++ Sbjct: 719 IVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAIDDFGTGYSS 778 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L++ + +KID FV DI + D I ++ LA L+V AE VET QQ L Sbjct: 779 LAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVETAAQQHFL 838 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 + G LQG+L G+P+P Sbjct: 839 ARHGCDQLQGFLFGQPEPAE 858 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 96/440 (21%), Positives = 185/440 (42%), Gaps = 17/440 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-----EAGKSFCCLRIDN 359 + + + R A DPLT LPN + +A ++ E+ + + +D Sbjct: 952 HIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQMHEALDRLMAKEESQLALLFIDLDR 1011 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-PETEGRLQHMV 418 + ++ G ++ + L + + ++ G E ++++ PETE +Q ++ Sbjct: 1012 FKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLVSRIGGDEFTVIMATLPETEQAIQTII 1071 Query: 419 NILNS------RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ + + L + + N + LL + A Sbjct: 1072 DVSERILHQMMQPFFIEDRQLYLSASVGIALYPENALSGTDLLRNADTAMYHAKAMGKN- 1130 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARLKYD 529 E ++ + +++ L N + AL + + L Q I++ G + +L + D Sbjct: 1131 NFQFYAEEMNEKAMERLELENNLHLALQRDEFELTFQAQWDIKHNCICGVETLLRWHRPD 1190 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G++ PDKF+P+I + L VL + + P+ +VNL Sbjct: 1191 IGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIMDWQEAGYVIPKLAVNLSARQFKDAQ 1250 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + RI R+ + P+ + LE+TE + + ++ + + K GF ++IDDFGTGY++ Sbjct: 1251 MLDRICRIVDETGVDPELIELELTESILMDDIDRTLAVLNEARKMGFGLSIDDFGTGYSS 1310 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK+ +KID F++++ N D I R+I +A L V+AE VE + Q+ L Sbjct: 1311 LSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTIVAMANNLGLGVIAEGVENESQRQFL 1370 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 +G +QGY+ P P Sbjct: 1371 KTIGCYQVQGYMYSHPVPAD 1390 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 104/440 (23%), Positives = 186/440 (42%), Gaps = 27/440 (6%) Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMS 364 S+ R A DPLT LPN A E Q + + +DN + ++ Sbjct: 134 EASKEYADRLAYLAYHDPLTNLPNRLAFESQLAQALRGCERDNRQLALMLIDLDNFKNIN 193 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 G + ++ + L ++ ++ + ++ G E ++VL E+ + N + Sbjct: 194 DTLGHHVGDELLQKVALRLRESVRSSDLVARIGGDEFVIVLPEIESPLTAARVANKVQQN 253 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 S +I + G + DG + TL + A+ + ++H Sbjct: 254 MADSYRIADHALYATPSIGISLFPIDGSDANTLLRNADTAMYHAKDAGRNNHQF----YT 309 Query: 479 EMVSGQTTKQVLLLNTIRTALD-----QGDLLLYAQPIR---NKEGEGYDEILARLKYDG 530 ++ +++ + N +R A+ + L+ QP + G + +L Sbjct: 310 ARMNEAAGERLHMENELRQAISAISPGDSEFSLHFQPQVQTATGQVFGLEALLRWNNPIF 369 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G ++P +F+ + + L V+ + + + R ++N+ L +N+ Sbjct: 370 GQVSPMRFIAIAEETGLIQPLGDWVIWETCRLIRQMKQHGIEDIRIAINISAQQLRHENL 429 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + Y + P+ + LEITE A N E+++ ++QL G +AIDDFGTGY++ Sbjct: 430 LLLVRGALSCYDLRPEDIELEITESTAMQNPETTLSILDQLAAMGIVLAIDDFGTGYSSL 489 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK L +K+D FVKDI + DA I + L + L +VAE VET+ Q+A L Sbjct: 490 AYLKHLPIQRLKLDRSFVKDIEIDANDAAICTATIALGHSLGLELVAEGVETEAQRAFLA 549 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 LG LQGYL +P P + Sbjct: 550 SLGCDTLQGYLYSKPMPFEE 569 >UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=A5ETN6_BRASB Length = 1047 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 104/438 (23%), Positives = 183/438 (41%), Gaps = 18/438 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS-------FCCLRI 357 L+ ++ + R A D LT LPN + E ++ L I Sbjct: 596 LINVIEDTTERRLADERIAHLAHYDALTELPNRVLFRERIAHEIERARHGMFFALLYLDI 655 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS-GPETEGRLQH 416 D + ++ G + +R+I + + + + +L G E ++L+ + + + Sbjct: 656 DEFKGINDSLGHHVGDELLRTIASRIRSCLAPEDTVARLGGDEFAVLLTMAADRDEVIAK 715 Query: 417 MVNILNSRQIHWNNTGLDMG--YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 + IL + + G + + + L + A Sbjct: 716 VTEILERIREPYRCLGHQLSTDASIGIALAPEHGVEIDQLTKHADLAMYAAKADGR-HTF 774 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGG 531 E + +++ L +R A+ +G L+ QP+ R G + +L + G Sbjct: 775 RFFEPAMDESARERLQLQQDLRRAITEGQFELHYQPLLGFRENIMTGCEALLRWRHPERG 834 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAG 591 ++ P F+PL L V+ + A P D R +VN+ P+ L +A Sbjct: 835 MVPPLDFIPLAEDTGLINEIGDWVMRTACAEAAHWPSD---IRVAVNVSPIQLKSPTLAL 891 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 + ++P+ + +EITE + + ++ + QLH G RIA+DDFGTGY++ Sbjct: 892 HVASALSAAGLAPERLEIEITEAVLIGDDDVALDILHQLHAMGVRIALDDFGTGYSSLSY 951 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKR D IKID FV DI ++ IV+++ +A A +++ AE VET QQ L +L Sbjct: 952 LKRFPFDKIKIDRCFVSDIGADSSS-AIVQAVVSIAAASNMTTTAEGVETGAQQTALRQL 1010 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGYL P+P A+ Sbjct: 1011 GCTEMQGYLFSAPKPAAE 1028 >UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR2_9RHOB Length = 1031 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 100/433 (23%), Positives = 182/433 (42%), Gaps = 20/433 (4%) Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---------EAGKSFCCLRIDN 359 VR + + R A D LT LPN + +Q E + L +D Sbjct: 550 VRDMRKQKEDEARILHLAQHDMLTGLPNRTYFRERFQQAIENQACAEETISAVMVLDLDR 609 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL----Q 415 + ++ YG + I+++ R L + ++ + +L G E ++ +T + Sbjct: 610 FKDINDLYGHPVGDKLIQTVARRLNACVTHHDTVARLGGDEFAIIQVNLKTTAEVGLLTN 669 Query: 416 HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 ++ +L+ NN + + L+ + ++ Sbjct: 670 KIIEVLSKPIHVGNNITIRTSASIGIALIPEHGTDPDELMSKADIALYEAKEAGRNTFAF 729 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGI 532 ++M ++ + +R AL+ +L L+ QP + G++ +L + G+ Sbjct: 730 FEDKMEEAILLRRT-MEGDLRNALENEELQLHFQPQARSDTRSIVGFEALLRWNHPEKGL 788 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGR 592 + P+ F+P+ + L VL + P + R VNL P+ + + Sbjct: 789 IAPNNFIPVAEESGLIIPIGRWVLNEACAQASQWP---ERYRVGVNLSPVQFCDEYLIQE 845 Query: 593 IIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERL 652 + R ++P+ + LEITE + ++ + QL + G IA+DDFGTGY++ L Sbjct: 846 VEGALARSGLTPERLELEITESVLIHDDRRALNTLRQLKELGITIALDDFGTGYSSLSYL 905 Query: 653 KRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 +R D +KID FV + A I+R++ DL +A + V+AE VET+ + LL Sbjct: 906 RRFPFDRLKIDRSFVSGVTQTPELAAIIRAVIDLGQALGMEVIAEGVETEPELELLRNES 965 Query: 713 VQYLQGYLIGRPQ 725 +QGYLIGRPQ Sbjct: 966 CDEVQGYLIGRPQ 978 >UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JTT5_BURVG Length = 884 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 101/447 (22%), Positives = 185/447 (41%), Gaps = 16/447 (3%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPE 345 AV IS +L +R + QA D +T LPN R AL ++ Sbjct: 427 FSAVDISGQSHVLCQMRDVTTRRQYEAQLVKQATFDEITGLPNRRLYIDRLSNALHRSKR 486 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 G + + +D+ + ++ G + + + L L++ + + + G E +L++ Sbjct: 487 DGTGCAVMFIDLDHFKRVNDTLGHPFGDQLLIAAAQRLSGLLRPGDTVARFGGDEFVLLM 546 Query: 406 SGPETEGRLQHMVN-ILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 S + + I+ + + +G F G+ LL Sbjct: 547 SDFTDPMECRIVAEGIVEAFAAPFEVAARSISVGASVGVSVFPGDGTEPDILLQHADTAM 606 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 ++ + ++ + + + IR+AL + ++ + QPI + +E Sbjct: 607 YEAKSAGRS-GFCFFNHDMNARVHDMLRIDARIRSALARNEISVLYQPIIDPVTREIVKA 665 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVN 578 + + D G + PDKF+P+ + L A+ VL+ A + P SVN Sbjct: 666 EALARWHSEDLGHVPPDKFIPVAEENGLIAQIGDWVLQEACMNAAKWSKELASPITVSVN 725 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + + + + LEITE S+ E+++ I L + G ++ Sbjct: 726 VSAKQFDDPTFVDSVFAALETSKLPAHLLELEITERVLISDDETALETISALREIGVGLS 785 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ L + + IKID FV+D+ + + R+I +AK+ L ++AE Sbjct: 786 LDDFGTGYSSLSYLTKFPLNTIKIDRAFVRDLDHDEQTQNLTRAIIAMAKSLDLKLIAEG 845 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQ 725 VETQ+Q L G +YLQG+ GRP Sbjct: 846 VETQEQADKLVLYGCEYLQGFYFGRPM 872 >UniRef50_Q2VYM7 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2VYM7_MAGSA Length = 982 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 101/436 (23%), Positives = 176/436 (40%), Gaps = 17/436 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLR 356 + ++R R +R A D LT LPN A+ +A + + L Sbjct: 531 FVLLLRDITRKRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRAEQTGERLAVLYLD 590 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 ++ + ++ YG + +R + R L ++ ++ + +L G E +++L Q Sbjct: 591 VNRFKDINDSYGHAVGDELLRQVARRLKACVRASDVIGRLGGDEFVMLLPSVGDHTAAQA 650 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 N + + L G + + + + LL + + L Sbjct: 651 CANKVLYAFAEPFDMEGLQLFAGTSIGIALYPDDADGAESLLSRADAAMYHAKRGG--LP 708 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 + + Q ++V L N +R AL + L QP + G + ++ Sbjct: 709 YSCFDIEMDRQVAERVSLENDLRLALGEDQFRLVYQPKVDALSGAIIGAEALIRWRHPVR 768 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNI 589 ++P F+P+ + L D VL + +A P SVNL P + Sbjct: 769 ADVSPGLFIPVAERAGLIGAIDDWVLVEACRQVAEWRAQGLILPSISVNLSPAQFHDGRL 828 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 ++ + P + LEITE S+ + ++ + QL G R+++DDFGTGY++ Sbjct: 829 KEKVKAALAGSGLPPSVLELEITETMMASDVDRAIEILGQLTTLGVRVSLDDFGTGYSSL 888 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK +KID FV ++ N D I+ S+ LA SV+AE VET++Q A L Sbjct: 889 AYLKLFPVSTLKIDRAFVTELPGNAKDGAIIASVIALAGNLGFSVIAEGVETREQAAFLA 948 Query: 710 KLGVQYLQGYLIGRPQ 725 G +QG+L RP Sbjct: 949 ARGCPIMQGFLFSRPV 964 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 94/441 (21%), Positives = 178/441 (40%), Gaps = 16/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 + + S+ + A D LT LPN E + + Sbjct: 290 NYIGIFSDISESKATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAVFFI 349 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-ETEGRL 414 +D + ++ G ++ + + L ++ + + ++ G E ++L+ + E Sbjct: 350 DLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILADISDNESVA 409 Query: 415 QHMVNILNSRQ--IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + +L Q I + +G + N ++ L ++ Sbjct: 410 RVARKVLEELQKSISIKGHDIFVGASIGIALYPDNGNDVETLTKNADMAMYRAKESGRG- 468 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYD 529 E ++ T++++ L + + A++ L +Y QP N + G + ++ + D Sbjct: 469 NYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYYQPKLNMQSGIMVGMEALVRWPQAD 528 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKN 588 G ++ P +F+P+ + L V+ + A + R +VNL Sbjct: 529 GSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRETGMNLRVAVNLSAREFQSPG 588 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + + + +EITE + E+++ +EQ+ + G IA+DDFGTGY++ Sbjct: 589 LVVEIEQTLAECGLDARHFEVEITESLMMHDVENAIATLEQISRLGIHIAMDDFGTGYSS 648 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK+ +K+D FVKDI + D IV +I LAK +L VVAE VETQ+Q + L Sbjct: 649 LSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKVLNLKVVAEGVETQEQLSFL 708 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 + QGY +P D Sbjct: 709 RQNLCDECQGYSFSKPLSAVD 729 >UniRef50_C8T3N0 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T3N0_KLEPR Length = 538 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 256/518 (49%), Positives = 356/518 (68%) Query: 10 NIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLC 69 NIK LAF + +V I L+RFISP II + I++AW+P+ VM S++FIFG + P++ Sbjct: 8 NIKKTLLAFIICLVAIPLARFISPQTIIDGNLIYIAWLPISVMFSVIFIFGRYAIAPLIL 67 Query: 70 GMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG 129 TN + L+ Q ++L Q F V +CAILR +G RWR G T++++ R+FW G Sbjct: 68 AFAITNSFLIKLTLPQAFILLFCQLFAVFVSCAILRLLVGKRWRCGPTAKHMGARIFWGG 127 Query: 130 LVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRM 189 P+ +K +MYL G +F FPL I+++FG I+TV+D+ SL +A LI+ YY RM Sbjct: 128 FFAPVLLKITMYLAGQYFAFPLAITSYFGSMPLIYTVIDIQSLISAALIFTTFLYYPMRM 187 Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 I+SP +A+ W+++ P L + R+FTL W AL+V+L LLC PY+++FIAGYLVPV FI Sbjct: 188 IISPRYARRFWQQECLPWLAPQYRSFTLYWFIALAVILTLLCAPYQSEFIAGYLVPVIFI 247 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMV 309 ++ +G+ ++ + L ++W+VS L+ YN+NFLQGV++EYSL+F+L+VLISF++CL YM Sbjct: 248 VYFIGISRIGHALLRISWSVSAFLLVVYNKNFLQGVQSEYSLSFVLSVLISFTICLFYMA 307 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGL 369 IY RS+ RRW QA DPLT LPN RALE + ++ C LRIDNL+F+SRHYGL Sbjct: 308 DIYARSDRNKRRWRSQAEEDPLTGLPNLRALESHLQSCPQQAICSLRIDNLDFLSRHYGL 367 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWN 429 MM V C R I R L PL+ +K++Q+PGSEL+LVL GPE RL HMV +LN ++ W+ Sbjct: 368 MMGVDCKRQIIRALQPLLGAADKVFQVPGSELILVLDGPEPSSRLNHMVAVLNHKKFSWH 427 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 N LD+ +GAAWGR DG E L +LGQLSWL+EQ+ + VLALD +++V QTT+QV Sbjct: 428 NQPLDLEFGAAWGRDDGQGEGLYQMLGQLSWLSEQAGSERRVLALDEEQDLVVDQTTEQV 487 Query: 490 LLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLK 527 LL ++ L L+LYAQPI+N EGEGY EIL R++ Sbjct: 488 RLLMRVKQVLKDRALMLYAQPIQNPEGEGYHEILTRMR 525 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 116/595 (19%), Positives = 224/595 (37%), Gaps = 36/595 (6%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 PL+ A+ V+ + F L + P + + Sbjct: 115 LPLERLGASPSPAAVLAAVETIRKTAEKKSAVPGFDCLVQ----PVYFDYERVGTVVIHA 170 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 E L W A +++L +L+ F A + P L+L + Sbjct: 171 DTELFRKNLRWTATVTLLFMLVTVIAAYFFSAKLQQM------------ISRPLLDLLSS 218 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + ++N+ V L + F+ L + A Sbjct: 219 MKDVS---ASKNYAIRVAKPSDDEIGL-LYDGFNEMLSEIEERNQILRQRQAHLQQLAHY 274 Query: 329 DPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN +AL QA S + +D+ + ++ G + + Sbjct: 275 DPLTRLPNRTLFYDRLAQALNQAERNRQALSVIFIDLDHFKDINDTLGHRTGDLLLIDVA 334 Query: 381 RTLLPLMQENEKLYQLPGSELLLV---LSGPETEGRLQHMVNILNSRQIHWNNTGLDMGY 437 L +++ + + +L G E + + + + +N L ++ + + + Sbjct: 335 NRLSTVVRSCDTVARLGGDEFTVFTQNVMNADNAAIVAAKLNALFAKPFQLGESEIYVTA 394 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F + +T+ LL + A + + ++ ++V LL+ +R Sbjct: 395 SIGVTLFPNDGKTVDELLMNADIAMYHAKACGKNV-YKMFDRKMNEHANERVTLLSDLRL 453 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ + +L+ QP + + ++ + G++ PDKF+ L + Sbjct: 454 ALEREEFVLHYQPKVDLLTGNVTSVEALVRWMHPRLGMLAPDKFIRLSEESGFIVELTDW 513 Query: 555 VLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + G R +VNL P ++++ I + + P + +EITE Sbjct: 514 VLRTACTQAKKWQEQNLGSVRVAVNLSPYHFQRQDVKEAIFSVLDATGLEPALLEIEITE 573 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N E + +L + G I++DDFGTGY++ L R + +KID F+ +++ + Sbjct: 574 SALMQNDEYTCALFRELRELGMTISVDDFGTGYSSLSYLHRFPINTLKIDRTFILNMMKS 633 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + D IV +I +AK+ ++ +VAE VET Q L G +QG+L+ RP Sbjct: 634 SEDQAIVTAIIAMAKSLNMQIVAEGVETVDQLEKLKDQGCHEIQGFLVSRPVAAE 688 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 93/439 (21%), Positives = 180/439 (41%), Gaps = 16/439 (3%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 +++VR S+ + QA D LT L N ++ L + Sbjct: 402 IHIVRDVTESKKMEDEIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDL 461 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D + ++ G ++ I L ++E + + ++ G E ++++ + Sbjct: 462 DRFKSINDSLGHAAGDKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAI 521 Query: 418 VNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 N + S + + L + + + E + LL + Sbjct: 522 ANKILSSMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRN-NY 580 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 ++ +T ++V + N +R AL++ +L++ QP + G + ++ L + G Sbjct: 581 QFYNPALNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLHPELG 640 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 +++P F+P+ + D VLE+ + + +VN+ + ++ Sbjct: 641 LLSPGHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRRPDLV 700 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ R+ + P+ + LEITE A + E ++ ++ L AIDDFGTGY++ Sbjct: 701 DQVRRVLNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSSLS 760 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+L +KID F+ + T+ D IV +I +A L V+AE VE Q LH+ Sbjct: 761 CLKKLPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFLHQ 820 Query: 711 LGVQYLQGYLIGRPQPLAD 729 +QG+L RP P D Sbjct: 821 NHCDQMQGFLYSRPIPAED 839 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 104/442 (23%), Positives = 198/442 (44%), Gaps = 22/442 (4%) Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 L + + + + QA D LT LPN +Q + + + + Sbjct: 146 LDLEKNLKILDEQREQLEYQANHDSLTDLPNRVLFMDRLQQSINIAQRYDNKVALLFIDL 205 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + + R + M++++ L +L G E ++L+ ++ M Sbjct: 206 DHFKEINDSLGHGVGDKVLIEVSRRMKNQMRKSDTLSRLGGDEFCIILNDIID---IEDM 262 Query: 418 VNILNS------RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 +I+ S + N L +G + + + LL ++ Sbjct: 263 SDIITSGMEALKEPMEINGHTLYVGMSIGVSVYPNDGNSASSLLKNADAAMYKAKGDGRN 322 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKY 528 +E ++ + ++V L +R AL++ +L++Y QP + + G + ++ Sbjct: 323 -TYCFYDEAMTERAFERVFLETALRKALEEDELVVYFQPQIDARENKLVGMEALVRWEHP 381 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 G + PDKF+PL + + D V++ L P + ++NL + + Sbjct: 382 IMGFIYPDKFIPLAEITGMIVQLDRLVMKKALTQFKKWDKAGLNPGKLALNLAIKQIEEN 441 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I + S + + E+TE Q +N E+S+ +++L G IAIDDFGTGY+ Sbjct: 442 DFIEFIENILDCEDCSYKNIEFELTENQIMNNPEASIETLQKLSDLGISIAIDDFGTGYS 501 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL D +KID F+KD+ + DA I ++I L + +L V+AE VET++Q+ Sbjct: 502 SLAYLKRLPIDKLKIDRSFIKDLPQDADDAAITKTIISLCSSLNLKVIAEGVETEKQKNF 561 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 + + G Q++QGY RP + D Sbjct: 562 ILQNGCQFIQGYYYSRPLSIED 583 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 103/444 (23%), Positives = 184/444 (41%), Gaps = 20/444 (4%) Query: 305 LLYMVRIYHRSEWL---NRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKSFC 353 +LY + IY L R AL DPLT LPN AL+ A + Sbjct: 629 ILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALL 688 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D+ + ++ +G + + L ++E++ + +L G E ++L + Sbjct: 689 MLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDD 748 Query: 414 ----LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + +++ L+ + N + +G + + T + L+ Q ++ Sbjct: 749 VSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDG 808 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEGYDEILARL 526 EE+ + ++ L + A+ + ++ QP I+ + G + +L Sbjct: 809 RDGYRYFSEELFL-KAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWD 867 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLL 585 + G++ P +F+ + + L VL + +VNL PL L Sbjct: 868 DPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLH 927 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 ++ I + + LE+TE E ++ ++ L + G RIAIDDFGTG Sbjct: 928 HGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTG 987 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LK+ D++KID FV+DI D I +I + + L+V+AE VET+ Q Sbjct: 988 YSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQL 1047 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L + G Y QGYL P P + Sbjct: 1048 EFLEQQGCDYYQGYLYSMPLPAEE 1071 >UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacteria RepID=A4C9D0_9GAMM Length = 1503 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 99/439 (22%), Positives = 182/439 (41%), Gaps = 14/439 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 + ++ + + + A D LT LPN L + + + Sbjct: 1051 NYIVVITDISEQKDAEKELRVLANYDTLTKLPNRSLLLDRISHATELSRRHKNRLALLFI 1110 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D+ + ++ G + + ++ + L +++ + + +L G E ++++ +T L Sbjct: 1111 DLDHFKQVNDTLGHDLGDTLLITVAQRLKYGLRKQDTVARLGGDEFVILIEDIDTIDELI 1170 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + N + + F + + LL + Sbjct: 1171 PVCRKICEEVSLPVQLGNHRMTVEPSIGVAIFPDDADNSLDLLKSADIAMYHAKKRGGA- 1229 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDG 530 + ++ + ++V L N ++ A+ + Y QPI + E+L R + D Sbjct: 1230 TYQFFHQEMNHKIQRKVQLENELKEAVKLNQFVNYYQPIISATDFTLKGFEVLLRWRQDN 1289 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIA 590 +++P +F+P+ L L ++ L K SVNL + I Sbjct: 1290 KLISPAEFIPVAESMGLITTLTFAALTRAMQDLKAWLVSKPDCYVSVNLSARDFEHETIG 1349 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++ + + ISP V+ EITE +++ ++ + L + G RI +DDFGTGY++ Sbjct: 1350 EKLTDIILQADISPTQVVFEITESALMQDSQKALEAMLILKQKGCRIYMDDFGTGYSSLS 1409 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D++KID FV DI + D I+ S LA + S VAE VET+ Q L Sbjct: 1410 YLKRFPIDVLKIDQSFVADIGQDASDEAIIHSTLALAHSLGKSCVAEGVETKAQVEFLQM 1469 Query: 711 LGVQYLQGYLIGRPQPLAD 729 LG YLQGYL +P P + Sbjct: 1470 LGCDYLQGYLFSKPVPSNE 1488 >UniRef50_B8GSV3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=2 Tax=Thioalkalivibrio RepID=B8GSV3_THISH Length = 806 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 110/515 (21%), Positives = 214/515 (41%), Gaps = 23/515 (4%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGK-LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + N G + F F G G + +P ++ +T L+ + E+++ Sbjct: 274 WRNHLARGRSLAEVFRTFHEGSGDPVPHPLIHAVPD-ATASSLHQGVVLVSRDGREFAVE 332 Query: 293 FILAVLISFSVCLLYMV---RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ------- 342 + A + ++ R ++ + R+ A D LT L N E+ Sbjct: 333 EVSAPIRDRDGHVIGAALVFRDVTQAREMARKLSWAATHDSLTGLVNRAEFERRLDLLVT 392 Query: 343 -APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSEL 401 A ++ G + + +D + ++ G +R + R L +++N+ L +L G E Sbjct: 393 TARQEGRGHAVLFMDLDQFKLVNDTCGHAAGDELLRQLTRRLQGQLRDNDTLARLGGDEF 452 Query: 402 LLVLSGPETEGR---LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL--G 456 ++L G E + + + + W +G D + +++ L+ Sbjct: 453 GVLLEGCPMERAGQIAETLRATVAEFRFQWQEKIYTVGVCIGVAPIDEHIKSVASLMSDA 512 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ---PIRN 513 + + + + + ++ +S + ++ + I AL++ LY Q P+ Sbjct: 513 DAACYLAKEQGRNRIHIIQHGDQALSRR-QGEMSWVQRINEALERDRFCLYHQHIVPVSG 571 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 E + ++ L DG I+ P F+P ++ L D V+ +L L P + Sbjct: 572 NEPPHTEVLVRMLDEDGAIIAPMAFIPAAERYGLMPAIDRWVIARVLNHLRI-PGPRPHG 630 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +++NL +L + I+ + R + P V EITE A +N + + L Sbjct: 631 LYAINLSGQSLCDNQMLDFILDMLARTGVEPGRVCFEITETTAIANLTQAERFMSALRNL 690 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G R A+DDFGTG +++ LK+L+ D +KIDG FV+D+ + ++ +V SI + + Sbjct: 691 GCRFALDDFGTGMSSFGYLKQLKVDFLKIDGSFVRDMNEDPINRAMVESINHIGHIMGIQ 750 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +AE V + L +GV Y QG+ + P PL Sbjct: 751 TIAECVAHEAVMDHLKAIGVNYGQGFGLHMPAPLE 785 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 90/444 (20%), Positives = 179/444 (40%), Gaps = 22/444 (4%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLR 356 ++ R + + QA DPLT LPN +L QA + + + Sbjct: 300 IVINARDISERKRFEKELVHQAYHDPLTGLPNRVFLQRRLADSLAQAARERTRVALLFID 359 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---ETEGR 413 +DN + ++ G + + + LL ++ + + G E +++++G + Sbjct: 360 LDNFKLINDSLGHDAGDRVLSELGKRLLGCIRCGDMAARFGGDEFMVLINGTPGTDAALA 419 Query: 414 LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC--AHHHV 471 + + + L + + + L+ ++ Sbjct: 420 AADRLAATLAEPFVVDGHELVITTSIGVALGGDPDDRPEDLIRNADAAMHRAKLLGKARR 479 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG---YDEILARLKY 528 + D + Q +++ L +R L++G+ +Y QP+ + + ++ Sbjct: 480 VVFD---PAMYAQAVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVEALVRWHHP 536 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC---DKKGPRFSVNLMPLTLL 585 + G+++P +F+P+ + L VL + LA D SVNL Sbjct: 537 ERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFR 596 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 ++ I ++ + P ++ LEITE + S++ + L + G ++A+DDFGTG Sbjct: 597 HPSLTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTG 656 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR D +KID F + + + D +V ++ A A L V E VET++Q Sbjct: 657 YSSLSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQL 716 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L ++G +QG+L P P + Sbjct: 717 EFLERVGCDLVQGFLFAPPMPPDE 740 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 743 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 728 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 726 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 709 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 704 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 702 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 700 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 699 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 696 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 695 0.0 UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 692 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 692 0.0 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 691 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 689 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 689 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 689 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobact... 687 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 687 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 686 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 685 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 684 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 682 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 682 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 681 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 680 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 680 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 679 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 677 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 676 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 676 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 675 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 675 0.0 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 675 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 675 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 674 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 673 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 673 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 673 0.0 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 673 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 672 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 672 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 671 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 671 0.0 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 671 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 670 0.0 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 670 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 669 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 668 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 668 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 667 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 667 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 667 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 667 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 666 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 666 0.0 UniRef50_A0YBW6 Predicted signal transduction protein containing... 666 0.0 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 666 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 666 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 665 0.0 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 665 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 665 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 664 0.0 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 664 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 664 0.0 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 661 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 661 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 660 0.0 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 660 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 660 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 660 0.0 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 660 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 659 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 659 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 659 0.0 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 659 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 659 0.0 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 658 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 658 0.0 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 658 0.0 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 657 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 657 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 657 0.0 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 656 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 656 0.0 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 655 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 655 0.0 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 655 0.0 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 655 0.0 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 654 0.0 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 654 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 654 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 654 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 653 0.0 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 653 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 653 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 652 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 652 0.0 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 652 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 651 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 650 0.0 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 650 0.0 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 650 0.0 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 650 0.0 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 650 0.0 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 650 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 649 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 649 0.0 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 649 0.0 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 649 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 648 0.0 UniRef50_Q220B0 Response regulator receiver modulated diguanylat... 648 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 648 0.0 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 647 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 647 0.0 UniRef50_Q2SG37 Predicted signal transduction protein containing... 647 0.0 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 647 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 646 0.0 UniRef50_UPI00016AFAA6 predicted signal transduction protein con... 646 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Ch... 645 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 645 0.0 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 645 0.0 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 644 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 644 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 643 0.0 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_A3JAM8 Response regulator receiver modulated diguanylat... 642 0.0 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 642 0.0 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 642 0.0 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 642 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 642 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 641 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 640 0.0 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 640 0.0 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 640 0.0 Sequences not found previously or not previously below threshold: UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 640 0.0 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 129/751 (17%), Positives = 258/751 (34%), Gaps = 73/751 (9%) Query: 17 AFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNL 76 L + +S +A + + F+ ++ L+ ++ G + + C + + Sbjct: 87 PRHLHAFFPPVEHVLSGVATVIVAAAFMRYLTGDFFLARNYL-GIGITLTLSCYIATFSW 145 Query: 77 WNFHLS----------FLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLF 126 W +++ + + +V + R + G Sbjct: 146 WADYITTNPASKFGQTWCDVLFHTIAALLLVFPTWHLFRHRTG----------------- 188 Query: 127 WLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYL 186 WL + I ++ L + + IFT + + + L Y Sbjct: 189 WLRNI----ICFALVCFFLTETLKLVDIAYGERYEYIFTPIRRSFNLIGIYV---LGYVY 241 Query: 187 TRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R S RR A + EKR TL + + L+ GYL + Sbjct: 242 IREQESRR------RRATAKVVESEKRYRTLVENVNMG--ISLIDGNNRIVMNNGYLEKM 293 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLL----------NYNQNFLQGVETEYSLAFILA 296 F G+ Y CL + + L Sbjct: 294 FRKNAEKLTGRFCYQEFENRDECCDNCLGVEAMTTGRAVSREVERILDDGEPSGLRLSAF 353 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + +V + + A D LT LPN + Sbjct: 354 PVFNEQGKATKFIKVVEDITDRKRAEEKIRRLAYYDSLTGLPNRPLMMDRLSQAIRHARR 413 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ G + ++ + L +E++ L +L G E +++ Sbjct: 414 HGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAARLSGCTRESDTLARLGGDEFVIIA 473 Query: 406 SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 G + + + + + L + F + + LL + Sbjct: 474 PGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIGIVLFPSDGGNGEMLLQRADMAM 533 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 + + ++ + ++ L +R AL G+ L QP N + G Sbjct: 534 YAAKDRGGN-SYRFFSAEMNTRAVERHELEEDMRQALTNGEFFLMYQPQVNTGTWKVVGV 592 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVN 578 + ++ G++ P +F+P+ + ++ VLE + A D + VN Sbjct: 593 EALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEACRQGAQWQHDGLPPLQMGVN 652 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L + I G + + ++ + + + +E+TE ++E+++ + QL G R+A Sbjct: 653 LCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLM-DSETAVSTLGQLKALGVRLA 711 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY+++ LK D IKID F++DI + + I+ +I +A++ V+AE Sbjct: 712 IDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVAVARSLGPEVLAEG 771 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET++Q L + +QG+ RP D Sbjct: 772 VETEEQLRYLMSITCADIQGFYFSRPLLPDD 802 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 728 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 124/597 (20%), Positives = 210/597 (35%), Gaps = 21/597 (3%) Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAP 206 D KI + DA F L + L +L+ L + +R I+ Sbjct: 260 VDMRRKIYSQGVDAVQYFLFCFLGFCLISSLTGYILYAKLLASRKERKDTEKRYRSVISQ 319 Query: 207 SLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLT 266 + S + L Y D + GV L Sbjct: 320 ASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTLYDIMEDDRSGVDWRINRIL--- 376 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + L + G E L L V + ++R + A Sbjct: 377 -SEKVCFLGEHTVRAEDGSMVEVDLNANL-VSYGEQQVICMVLRDISERKRFEGELMHMA 434 Query: 327 LTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN Q + L +D + ++ G ++ Sbjct: 435 HHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGHHTGDMLLKE 494 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDM 435 + L ++++ + + +L G E +++ T + + S + + Sbjct: 495 VADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSAPFRLEKHEMFI 554 Query: 436 GYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTI 495 + + +T + LL + E ++ + ++++ + + Sbjct: 555 TASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRN-TYQFFSEEMNSRVSERLSMETGL 613 Query: 496 RTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 R AL + + LL+ QP N G + ++ + G++ PD F+PL + L Sbjct: 614 RHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPIG 673 Query: 553 LQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 VL + R SVN+ N+ I + + + P + LEI Sbjct: 674 EWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELEI 733 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N E ++ + +L + G IAIDDFGTGY++ LKRL ADI+KID FV I Sbjct: 734 TESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGIP 793 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 N D +V +I +L L +VAE VE Q+Q L + Q +QGY +P P Sbjct: 794 GNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAE 850 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 100/523 (19%), Positives = 195/523 (37%), Gaps = 23/523 (4%) Query: 229 LLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 ++ + I GY V F G + + L A + + Sbjct: 357 IIYVNPAFERITGYGVDEVIDKNPRFLRGDDRDQAELKKLVQAFKEEREGCFVLRNYRKD 416 Query: 286 ETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQ 342 + + +A + + ++ + QA DPLT LPN L+ Sbjct: 417 GSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQLVYQATHDPLTGLPNRNLLQD 476 Query: 343 AP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + L +DN + ++ G + ++++ L ++ + + Sbjct: 477 RLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTV 536 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQET 450 +L G E ++VL + + + + + + + F + ET Sbjct: 537 ARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGET 596 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL + ++ + +++ L ++ A+ + LL+ QP Sbjct: 597 VDALLKNADAAMYHAKEQGKN-NYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQP 655 Query: 511 IRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + ++ + G+++P KF+PL + L VL + Sbjct: 656 RVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQ 715 Query: 568 CDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 R +VNL Q+N+ + + ++PQ + LE+TE AE S Sbjct: 716 DAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAI 775 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + +L G +AIDDFGTGY++ LKR +KID F++D+ + DA +V++I + Sbjct: 776 LRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITM 835 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A + +AE VE +Q L + + +QGY RP + Sbjct: 836 AHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEE 878 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 124/728 (17%), Positives = 261/728 (35%), Gaps = 67/728 (9%) Query: 28 SRFISPLAIIHSSYIFLAWMPLC-VMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQT 86 +R + +I + + + + +M++ + ++ W ++ T + F Sbjct: 107 TRVVKGSVVIGTGIAGMHYTGMAAMMMNAVILYDW---------LWFTVSIFVAILFSMV 157 Query: 87 AVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSF 146 A++L Q V + WR + + + + + Sbjct: 158 ALILTFQLRSVDPVEGL--------WRKIFAGLLMGASITGMHYTGMYATTFVAHEHMTI 209 Query: 147 FDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI-------- 198 P S I +V+ L+ +V + R++ S + Sbjct: 210 AVIPYDDSGLIATMIGIVSVLILVVTLASVYVDKQFAGKTLRVLESDQRYKSLFEHNYDG 269 Query: 199 --LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVG 256 + D S+ + L +C + + I+ + Sbjct: 270 VIFYSIDGTQSVMNPAAMRLTKEQSLPLEKLKTMCISTDAELISTH-------------- 315 Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE 316 F N + C + G + ++ + + +VR + Sbjct: 316 -----FTNAVQGDARNCDITLTTRE--GCQLHLNMTHTPVFVDQQITGVFMIVRDITNKK 368 Query: 317 WLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYG 368 + + A D LT LPN R + +A + + L +D+ + ++ G Sbjct: 369 EYEAKINYLAFHDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVYVLFLDLDHFKLVNDSLG 428 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 ++ L + + +Y+L G E +++L+ TE + M N +N + Sbjct: 429 HDFGDLLLQEASLRLRECVGKKGTVYRLGGDEFMVILTDV-TEREVSSMANEINETIEQA 487 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + L + R+ + + L+ + + + Sbjct: 488 FFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAKDKGKN-SFHLYVPNLEQAV 546 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ + N + AL + + LL+ QP + + G + ++ + G++ PD+F+ + Sbjct: 547 NDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFISVA 606 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL + K R +VNL L+++ I + + Sbjct: 607 EETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQTR 666 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++P+ + LEITE + + +++L + G +AIDDFGTGY++ LK + +K Sbjct: 667 LAPEYLELEITESSMI-DVHRATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLK 725 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D++ + IV +I +A + V+AE VET+++ A L + + +QGYL Sbjct: 726 IDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLF 785 Query: 722 GRPQPLAD 729 RP P D Sbjct: 786 SRPLPSED 793 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 96/453 (21%), Positives = 182/453 (40%), Gaps = 16/453 (3%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 A + ++ + + + + + A D LT LPN Sbjct: 482 AQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQA 541 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +D+ + ++ G + ++ I + L+++ + + ++ G E + Sbjct: 542 HRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTI 601 Query: 404 VLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L + + + + N + + + + LL Sbjct: 602 LLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADA 661 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 Q+ ++ QT ++ L N +R ALD+ + ++Y QP + Sbjct: 662 AMYQAKEMGRN-NYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIV 720 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFS 576 G + ++ G+++P +F+P+ + L +L R + Sbjct: 721 GVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVT 780 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL LQ ++ I + + + PQ + LEITE A + + + +L K G Sbjct: 781 VNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGIT 840 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ LKRL DI+KID F+ D+ T + D I+ +I L + VVA Sbjct: 841 LAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVA 900 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L + +QGYL +P P+ + Sbjct: 901 EGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRE 933 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 115/640 (17%), Positives = 232/640 (36%), Gaps = 37/640 (5%) Query: 118 SRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLK---ISTFFGDADAIFTVVDLLSLFT 174 + R++++ ++ +++ I+ + +L++L Sbjct: 269 APLKTNRIYFITVMAVGTSVTLLFVWFLMQRLTSPLSLITRHVEAIPDKSGLHNLINLER 328 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LL 229 + +I + + + + E L+ A + + L Sbjct: 329 KDELGT--------LINAFNSMILSLDQHQNALRESESNFRALADNANDGLQIITDSSHL 380 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN----YNQNFLQGV 285 I GY V + + + + + T + Sbjct: 381 AYVNKRAAEIVGYSVEEMLLTTIETIIHPDHLQMIIERKAKTDAGEFVPKQFEIMLAHRN 440 Query: 286 ETEYSLAFILAVLISFSVCL-LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + + A I + L +VR + A D LT LPN L+ Sbjct: 441 GSCVPVEVTTARTIWQGKQVELAIVRDITDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRL 500 Query: 345 --------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + L +D + ++ G + + ++ L ++E + + ++ Sbjct: 501 GQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLTECVRETDTVARI 560 Query: 397 PGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 G E ++++S E L + + S+ + N+ + + + + +Q Sbjct: 561 GGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQG 620 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL ++ A ++ Q + ++L N++R AL++ + +++ QP + Sbjct: 621 LLKNADLAMYKAKDQGKN-AFQYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQMD 679 Query: 514 ---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 G + ++ D G++ P +F+P+ + L L++ Sbjct: 680 LKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAG 739 Query: 571 K-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 R +VNL + QK I + K+ ++P + LE+TE S AE S + + Sbjct: 740 FMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHK 799 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G +AIDDFGTGY++ LK + +KID F++D+ N D IV +I +A Sbjct: 800 LKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHN 859 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +L V AE VE Q L +QGYL+ P P A+ Sbjct: 860 LNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAE 899 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 709 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 104/570 (18%), Positives = 210/570 (36%), Gaps = 46/570 (8%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV- 255 ++ E+R + A V Y+ + Y P F +F + Sbjct: 301 ITERKQAEEALRKSEERYRIVLESAPDPV------VVYDTEGKVAYFNPAFSRVFGWTLD 354 Query: 256 ----GKLRYPFLNLTWAVSTL--------CLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + + + L L + + A Sbjct: 355 ESIGRNIDFLPVENVPENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHD 414 Query: 304 CL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-------------- 346 L + ++ + A D LT L N ++ E Sbjct: 415 KLQGSIITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRR 474 Query: 347 --EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + L +D ++++ G + ++ + L +++++ +++L G E ++ Sbjct: 475 IKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTII 534 Query: 405 LSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L+ + + + + +R + L + + + + ++ L+ Sbjct: 535 LNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIA 594 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGY 519 + E ++ +T ++++L N +R AL L++Y QP+ + + G Sbjct: 595 MYAAKEE--NQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVDSTNQIVGM 652 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVN 578 + +L + G+++P +F+PL + L VL + +VN Sbjct: 653 EALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVN 712 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L + ++ I ++ + + P + LE+TE + E ++ ++ L G + Sbjct: 713 LSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFS 772 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D +KID FV D TN D I+++I +A+ + VAE Sbjct: 773 IDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEG 832 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VE ++QQ L G +QGY GRP P Sbjct: 833 VEAKEQQDFLIHHGCHMMQGYYFGRPMPAE 862 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 113/558 (20%), Positives = 211/558 (37%), Gaps = 26/558 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVL------LLLLCTPYENDFIAGYLVPVFFII 250 ++ E+R L A V+ LL +P + Sbjct: 388 ISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKA 447 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE-YSLAFILAVLISFSV---CLL 306 + +Y + +L + + L + + S ++ Sbjct: 448 LLPVIMLPEQLATAAGMEQMICSDTSYYREYLSPTREGKRWIGWALRCIFNQSGQAEAII 507 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 M R + A DP+T LPN L G + L +D Sbjct: 508 GMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLD 567 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G M +R + LL ++ ++ + +L G E ++++S + + + +V Sbjct: 568 RFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVV 627 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + ++ + F + + LL Q+ Sbjct: 628 MKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTC-H 686 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 ++ + T+++LL +T+R AL++ + L QP + G + +L D G+ Sbjct: 687 FFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGV 746 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P+ F+P+ + L VL + + R +VN+ Q+N+ Sbjct: 747 VPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGL 806 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 RI ++ + P + LE+TE N E ++ + QL K G ++IDDFGTGY++ Sbjct: 807 RIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSH 866 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK D +KID FVK + + DA I +I LA + L+VVAE +E +Q +H+ Sbjct: 867 LKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQR 926 Query: 712 GVQYLQGYLIGRPQPLAD 729 +QGY + RP + Sbjct: 927 HCDTMQGYYLSRPVTAEE 944 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 111/501 (22%), Positives = 212/501 (42%), Gaps = 25/501 (4%) Query: 252 TLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLY 307 L G+ F + W A++T + + Y + + + Sbjct: 382 LLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTVTAVKDRNGMVTNYVG 441 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCCLRIDN 359 ++ + + + A DPLT LPN R L +Q + + +DN Sbjct: 442 VLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFIDLDN 501 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG-----PETEGRL 414 + ++ YG M ++ + + L+ +++ + + + G E +++L G + + Sbjct: 502 FKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPLDAASQA 561 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + F+ Q+++ L+ Q Q+ Sbjct: 562 ETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGRN 621 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYD 529 + L + + K+ L +R A++ L+ Q + + G + ++ + Sbjct: 622 V-LRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVDESRHPFGAEALIRWFHPE 680 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQK 587 G+++PD+F+PL + +L VLE+ + G SVN+ Q Sbjct: 681 HGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQT 740 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + ++ L ++Y I+P + LE+TE N E ++ + L + G + ++DDFGTGY+ Sbjct: 741 DFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYS 800 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + + LKRL D +KID FV+DI + D IVR+I +A + L V+AE VET++QQ Sbjct: 801 SLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKH 860 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G + QGYL G+P P+ Sbjct: 861 LSSKGCKNFQGYLFGKPVPIE 881 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 704 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 97/486 (19%), Positives = 192/486 (39%), Gaps = 19/486 (3%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWL 318 + A+ L + + + + A ++ + + +V + Sbjct: 463 LEVIRVALCELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDITERKRY 522 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + Q+ D LT LPN L + + + +D+ +F++ G Sbjct: 523 EEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHD 582 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH 427 M ++ R L ++ + + + G E ++VLS + + R Sbjct: 583 MGDKLLQIAARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQ 642 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 L + + + Q LL ++ ++ Sbjct: 643 IGEHELVVSCSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRN-NFQFYTGDLNDIVLA 701 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ + +R AL++ + L++ QP + G + ++ + G ++P F+PL + Sbjct: 702 RLTMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEE 761 Query: 545 FNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL + D +VNL P Q+++A + R+ + ++ Sbjct: 762 TGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLA 821 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 P+ + LE+ E + + ++ ++ L + G ++ +DDFGTGY++ LKR D++KID Sbjct: 822 PRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKID 881 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV+DI + A IVR++ LA +L VVAE +ET+ Q L L +QG+ R Sbjct: 882 QSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSR 941 Query: 724 PQPLAD 729 P P A+ Sbjct: 942 PVPAAE 947 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 116/633 (18%), Positives = 231/633 (36%), Gaps = 34/633 (5%) Query: 122 WQRLFWLGLVTPIGIKCS-------MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFT 174 + WL ++ + G+F D L DA+ + T + ++SL Sbjct: 6 AINMIWLAILLAFVYWFLEPTIYAFVLQKGTFTDKWLH-----PDAEELRTRMSVVSLLL 60 Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS--VLLLLLCT 232 L L R Q ++ T+ ++S + + Sbjct: 61 --LFGVYAQTMLKRQQQIMESLQASKQKIRQIIDTANDAFITIDAEGSISDWNPMAEMIF 118 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + D G + + + + + L E+ Sbjct: 119 GWPEDLAIGKSMMDLIMNQAPRNALIDDIQEFINTGSAPFTQGQIVITALHRDGHEFPAE 178 Query: 293 FILAVLISFSVCLLYMV-RIYHRSEWLNRRWHLQALTDPLTLLPNF----RALEQ----A 343 ++ + + + R + + + A D LT L N L++ A Sbjct: 179 MSISPQAVGASFIFNIFVRDISQRKADEEKLETLATRDELTGLINRFSYNHLLKKEVALA 238 Query: 344 PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G + +R L ++E++ + ++ G E L+ Sbjct: 239 KRHMESLAVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRESDTVARIGGDEFLI 298 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 ++ G + + + + + + +G + + + ++ L+ Sbjct: 299 IMPGIKDVHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADT 358 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGE 517 Q+ A + + K++ + +R A+++ L QP + Sbjct: 359 AMYQAKDSGRN-AYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRIL 417 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRF 575 G + +L + G ++P F+ LI NL VL+ K R Sbjct: 418 GVEALLRWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRM 477 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN Q ++ + + ++ ++ + + LEITE A ++ E ++ ++ L + G Sbjct: 478 AVNFAARQFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGV 537 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 IAIDDFGTG+++ LKR DI+KID F+ +I DA IV +I+++A + + V+ Sbjct: 538 SIAIDDFGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVI 597 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET+ Q L G +QGYL RP P Sbjct: 598 AEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPE 630 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 98/498 (19%), Positives = 195/498 (39%), Gaps = 19/498 (3%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 I F G + L + + + +A + + Sbjct: 439 IGFLWGKDWEQPGIEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPVKDDTGEVSHF 498 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRI 357 + + ++ Q D LT L N L Q + + + Sbjct: 499 VVALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDL 558 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D +F++ G +++I L +++ + + ++ G E +L+L G + Sbjct: 559 DRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDAGLSTGI 618 Query: 418 VNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + ++ + + + + T + L+ ++ Sbjct: 619 VQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRN-NF 677 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 ++ + +++ L +R A+++G+ +L+ QP + + G + ++ + G Sbjct: 678 QFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELG 737 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIA 590 ++ P +F+ L + L V+ + G R SVNL Q+++ Sbjct: 738 MIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLL 797 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 I + + PQ + +E+TE ++ + ++ + +L G +++IDDFGTGY++ Sbjct: 798 ESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLS 857 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D++KID FV DI T+ DA IV SI LA + L+V+AE VET++Q A L + Sbjct: 858 YLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQ 917 Query: 711 LGVQYLQGYLIGRPQPLA 728 +QGY RP Sbjct: 918 HDCDQIQGYFFSRPITAD 935 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 114/555 (20%), Positives = 206/555 (37%), Gaps = 24/555 (4%) Query: 198 ILWRRDI---APSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLG 254 + WRR + E+R + ++LLL D V + F L Sbjct: 301 LFWRRLLESLQQGRRSEERNRLVVERTNQAILLLEPGAGTIIDANPATCVLLGFSRNELT 360 Query: 255 VGKLRYPFLNLTWAV----STLCLLNYNQNFLQGVETEYSLAFILAVLISFS-VCLLYMV 309 + V + E + + + L M Sbjct: 361 GADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVEAMATQVPHGDDQALCLMF 420 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 QA D LT LPN LE + + +DN + Sbjct: 421 HDITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFK 480 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV--- 418 ++ G +RS+ + ++ + +L G E ++VL+ + Sbjct: 481 VVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDDAVTVAESF 540 Query: 419 NILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L + + + F + +T++ L+ + + Sbjct: 541 RNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRN-SFQFFA 599 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 E ++ + ++ + +R AL++G++LL+ QP G + ++ D G+++P Sbjct: 600 EEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISP 659 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRII 594 F+P+ L VL + R SVN+ + + R++ Sbjct: 660 ADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVV 719 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 R+ ++ +SP V LE+TE N + ++ + +L + G I+IDDFGTGY++ LKR Sbjct: 720 RIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKR 779 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 D++KID F+ D+V DA IV +I +A + VVAE VET +Q LL + + Sbjct: 780 FPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCE 839 Query: 715 YLQGYLIGRPQPLAD 729 +QG+ RP P + Sbjct: 840 EIQGFYFSRPLPPEE 854 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 107/528 (20%), Positives = 200/528 (37%), Gaps = 21/528 (3%) Query: 221 AALSVLLLLLCTPYENDFIAGYLV-PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQ 279 L+ + T + + G + VF I+ P T+ L + Sbjct: 286 VTYLNLVAEMMTGWPREAAIGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLAA-DS 344 Query: 280 NFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + E ++ A + + + + S + + A D LT LPN Sbjct: 345 ILIHRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDVSESRAMALKMAHLAQHDFLTGLPN 404 Query: 337 FRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L + L +D + ++ G + ++ + L+ ++ Sbjct: 405 RALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIR 464 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFD 445 + + + + G E +++L+ E + L + L + + Sbjct: 465 DTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYP 524 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + ++ + A+ ++ + +++ + +R AL QG+ + Sbjct: 525 DDGMDADTVMKNADTAMYHAKANGRN-NYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFM 583 Query: 506 LYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LY QP + G + ++ + G++ P +F+P+ + L VL + Sbjct: 584 LYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQ 643 Query: 563 LATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + SVN+ + K+ + + K + P + LE+TE +AE Sbjct: 644 VRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAE 703 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 SS +E L G ++AIDDFGTGY++ LKR + +KID FV DI + DA IV Sbjct: 704 SSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVG 763 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++ + K VVAE VET++Q A L L QG+L GRP P + Sbjct: 764 AMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADE 811 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 100/469 (21%), Positives = 189/469 (40%), Gaps = 23/469 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ ++ + + R + A D LT LPN Sbjct: 351 RKNGEVYPKWLSISAVVGTNGRVSHYIGTHNDITERKKAEERINALAFFDQLTGLPNRTL 410 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L ++ + + +DN + ++ G + ++ + L +++ + Sbjct: 411 LLDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGD 470 Query: 392 KLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 + +L G E ++VL+ E + + + + + + Sbjct: 471 TVARLGGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATL 530 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F G + L+ Q ++ A A+ + + + + + + AL + Sbjct: 531 FKGPLIPIDDLMKQADLSMYKAKAAGRN-AVRFFDPSMEIAVKVRAEMEDDLLRALAEKQ 589 Query: 504 LLLYAQPI-RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 LL+ Q + G + +L G+++P +F+PL + L VLE+ Sbjct: 590 FLLHYQAQMVGERLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQ 649 Query: 563 LATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 LA + +VN+ Q + +++ + ++ +PQ + LE+TE N Sbjct: 650 LAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENV 709 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E + + L G ++DDFGTGY++ LKRL D +KID FV+D++T++ DA I Sbjct: 710 EDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIA 769 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 R+I LA + L V+AE VET+ Q+ L G QGY RP P+ D Sbjct: 770 RTIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIED 818 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 99/514 (19%), Positives = 196/514 (38%), Gaps = 20/514 (3%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + L+ VF I+ + P + L N+ + EY++ Sbjct: 228 SNAEAQGKPLLEVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHTA-LIGRHGNEYAIED 286 Query: 294 ILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 A + +L + + + + A D LT LPN L Sbjct: 287 SAAPIRDQDGNVLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALTI 346 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + L +D+ + ++ G + ++ + R L ++ ++ + + G E + Sbjct: 347 ARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEFM 406 Query: 403 LVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++L + L + + + + F + E + L Sbjct: 407 ILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNAD 466 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 + + ++ + + L + +R A+++ + +LY QP + + Sbjct: 467 AAMYHAKSLGRN-NYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQV 525 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRF 575 G + ++ G++ PD+F+P+ L L V+ + Sbjct: 526 VGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPV 585 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VNL + L Q N + + + P + LE+TE A + + +L G Sbjct: 586 AVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGV 645 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++A+DDFGTGY++ LKRL + +KID F++DI T+ DA I+ +I ++ L+V+ Sbjct: 646 KLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVI 705 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VE Q L K G +QG++ RP P + Sbjct: 706 AEGVENINQLEFLKKEGCDQMQGFIASRPVPADE 739 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 116/612 (18%), Positives = 223/612 (36%), Gaps = 42/612 (6%) Query: 147 FDFPLKISTFFGDADAIFTV-----VDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 D ++ G D I T D++ T VL L + + + Sbjct: 14 LDLWIRRLLTMGAPDLIDTALCDGACDIVRAETGVLTAINRQAGLLTFTAASGAWNQMMK 73 Query: 202 RDIAPSLGKEKRAFTLSWLAALSV-LLLLLC-----TPYENDFIAGYLVPVF---FIIFT 252 P A + L V L L C + LVP+F + Sbjct: 74 GVTVPLRNGNICAALAACGTPLRVDRLSLFCRESCELFQVVEMNTALLVPIFDEGRVAAC 133 Query: 253 LGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIY 312 + ++ PF + L ++ + + ++ + Sbjct: 134 IAAFRMDKPFDQV--DEQLLQQYAHSASAVLRN---------FRLMEDLRRHAAMLEEEV 182 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMS 364 R A D LT LPN R + + L +D + ++ Sbjct: 183 AERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKLIN 242 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQ-ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 G + + ++ + L + E + + + G E ++ LS + + Sbjct: 243 DTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQKIID 302 Query: 424 R---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + L + + + + L+ ++ Sbjct: 303 VFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNC-QLFAPE 361 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 ++ + +++ L N +R AL++ + +L+ QP N + + ++ G++ P + Sbjct: 362 MNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSR 421 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L VL + + + +VNL P L Q +++ + R+ Sbjct: 422 FIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARV 481 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++P +++E+TE +AE ++ +L + G RI+IDDFGTGY++ LK+ Sbjct: 482 LAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFP 541 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 +KID FV++I +N D I ++ +AK +L VVAE VET +Q +L L +Y+ Sbjct: 542 VHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYM 601 Query: 717 QGYLIGRPQPLA 728 QG+L P P Sbjct: 602 QGFLFSEPAPAE 613 >UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDT9_TOLAT Length = 753 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 138/711 (19%), Positives = 256/711 (36%), Gaps = 63/711 (8%) Query: 50 CVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLG 109 +LS+ +FG ++ + + L +G T V+ + Sbjct: 65 SAILSMAGLFG----GALVATIAGVIAGVYRLWLGGATYGVGILTIVISVILGLAYRAAH 120 Query: 110 TRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDL 169 R + L+ + + ++ L+ S F FP+ + +F +TV Sbjct: 121 QRGWMSKGPIQL--------LLFGVLLHTAILLLFSLFPFPI-LHSFMQQIALPYTV--- 168 Query: 170 LSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL 229 + + ML + + I++ + E R + ++++ Sbjct: 169 -----SFALATMLLGLMLQDIINRT-------KTEQALQDSESRLRAIVQAIPDLMVIID 216 Query: 230 LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEY 289 Y + F+ +G + L A L + + Q EY Sbjct: 217 EDGHYLDALPT--TNNQFYPRALALIGSNLHSELPPETADRILATVRDSLRLQQTQTIEY 274 Query: 290 SLAFIL--------AVLISFSVC----LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 F + A + ++V ++++ R + A DPLT LPN Sbjct: 275 ERDFKMGQRLVEGRAQPLGYTVNNKQVVIFLARDITDRKIKEDEIAWLAFYDPLTGLPNR 334 Query: 338 RALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 R L+ + + +DN + ++ G ++ + L ++E Sbjct: 335 RLLQDRLHQAMAGSKRSGQRAALLFIDLDNFKTLNDTLGHDKGDLLLQQVATRLFECVRE 394 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--------NSRQIHWNNTGLDMGYGAAW 441 + + +L G E +++L L + + + + Sbjct: 395 CDTVARLGGDEFVVMLEELNHSEELAAAQSKMVGEKILVKLCQPYLIAGYEHNSSASIGI 454 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F +QE+ L+ + Q+ + L + + T + L N +R L Q Sbjct: 455 TLFLAHQESSDELMKRADIAMYQAKSAGRN-TLRFFDNKMQAIVTSRAELENDLREGLRQ 513 Query: 502 GDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 LLL+ QP + G + ++ G+++P F+PL + L VL Sbjct: 514 QQLLLHYQPQVDVHGRIIGAEALVRWQHPSRGMVSPAHFIPLAEESGLILSLGDWVLNEA 573 Query: 560 LKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + L +VN+ + Q + +++ + P + LE+TE Sbjct: 574 CRQLRRWAAQPAMAHLTMAVNISARQIHQPDFVDQVLAAIHTAGVQPYHLKLELTESLLL 633 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 + E + + L G ++DDFGTGY++ LKRL D +KID FV D++T+ DA Sbjct: 634 EDTEEIILKMTALKACGVGFSLDDFGTGYSSLAYLKRLPLDQLKIDKSFVHDLLTDPNDA 693 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I SI LA++ L+V+AE VET+ Q+ L LG QGYL G P P Sbjct: 694 AIASSIITLAQSLGLNVIAEGVETEAQRQRLEALGCYTYQGYLFGHPVPAD 744 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 91/445 (20%), Positives = 181/445 (40%), Gaps = 16/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKS 351 ++ L+ + R + + A D LT LPN A+E A + + Sbjct: 128 GKTIGLVGIGRDITERKQSEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLA 187 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D + ++ G + ++ ++ ++ + +L G E +++L E+ Sbjct: 188 VLFIDLDRFKNINDTLGHDAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILLPELESH 247 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + S + + + + + + E Q L+ ++ Sbjct: 248 DQAARVAQKILSAAIQPLDVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEE 307 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 + ++ ++++L N +R AL++ + L+ Q RN + G + ++ Sbjct: 308 GKN-NYQFYSPDLKVRSLERLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRW 366 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 + G ++P F+PL + L VL + +VNL Sbjct: 367 QHPELGTISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQF 426 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 N+ I + ++P+ + +EITE +AE ++ + + G R+AIDDFG Sbjct: 427 FDDNLINDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGV 486 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ +KR D +K+D F++DI N D I +I + K SL+V+AE VETQ+Q Sbjct: 487 GYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQ 546 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L QGY +P + Sbjct: 547 ENFLRDSACDQTQGYYFSKPVSPEE 571 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 108/566 (19%), Positives = 203/566 (35%), Gaps = 35/566 (6%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSV---------------LLLLLCTPYENDFIAG 241 R A + E++ L+ + + L ++ I Sbjct: 421 DAERARLAAAIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGYAPHELIDA 480 Query: 242 YLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY--NQNFLQGVETEYSLAFILAV-- 297 + + + + + L + + + Sbjct: 481 PIERLLKPEYVAEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWAEVVTTLGL 540 Query: 298 -LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEA 348 S V + R A D LT LPN ++ + Sbjct: 541 NRRSGRVEFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRG 600 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + +D+ + ++ G + + R L +++ + + +L G E + +L Sbjct: 601 QLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVFLLPDT 660 Query: 409 ETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + EG + +L + + + ++ L + + + L Q+ Sbjct: 661 DAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAK 720 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 E + ++T+ +LL N +R ALD+G L+ QP + G + +L Sbjct: 721 REGRN-GFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALL 779 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPL 582 + G ++P +F+P+ L A+ VL + + +VNL Sbjct: 780 RWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAA 839 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 N+ + ++ + + P V LE+TE A + +S++ ++ L G R++IDDF Sbjct: 840 QFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDF 899 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR + +KID FV+DI + D IV +I LA + + VAE VET Sbjct: 900 GTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETL 959 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q L + G +QGY RP P Sbjct: 960 DQLDFLRQQGCDTVQGYYFSRPLPAE 985 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 125/647 (19%), Positives = 247/647 (38%), Gaps = 33/647 (5%) Query: 113 RYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSL 172 + R F + + + + ++G L S F I ++ Sbjct: 277 YADPRPNHDVCRNFGMKGLFMLPLVSMGEVLGQISVVNLGDSNFSYSEGQIQLSQSIVDA 336 Query: 173 FTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCT 232 + L + +I +++ + + ++ L S + Sbjct: 337 TASTLSNLLYMEKQEVIIEERTSEITFKNKELERVITELQQLSREKELILNSAGEGIFGL 396 Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVS-------------TLCLLNYNQ 279 + + + + + + P + + L + + Sbjct: 397 DLDGNITFCNPAGASMLGYDIKNELIGKPSSMVFNGIEKGKKKQVASGCDEDWNLYDKTE 456 Query: 280 NFLQGVETEYSLAFILAVLISFSVCL--LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 F + ++ + + ++++ + + + + + + + + A D LT LPN Sbjct: 457 QFFRKDQSSFPVEYVISSIKEGTEIVGEVITFKDVTQRKQMEEEIKYHAYFDSLTDLPNR 516 Query: 338 RALEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L+ Q + L +D +F++ G +R + L + + Sbjct: 517 VLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPK 576 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDG 446 + + + G E + L ++E + +VN + SR H + + M F Sbjct: 577 SATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPD 636 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 N +T + L+ +S + E + +T + + L N + AL+Q +L++ Sbjct: 637 NGDTTEILVKNADTAMYKSKEISG-SSYHFFSEGMDTRTFESIKLENDLYKALEQEELVI 695 Query: 507 YAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 Y QP N + EG + ++ + G++ PDKF+P+ + L VL+ + L Sbjct: 696 YYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQL 755 Query: 564 ATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 SVNL L Q ++ + + + +SP+ + LE+TE N ES Sbjct: 756 KKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTES 815 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ +++L G +AIDDFGTGY++ LK+L +KID FV+D+ + DA I + Sbjct: 816 TLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD--DAAITNT 873 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I LAK +L V+AE VET++Q L +QGY RP D Sbjct: 874 IITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAED 920 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 89/461 (19%), Positives = 177/461 (38%), Gaps = 19/461 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + R A D LT LPN Sbjct: 642 RKSGESYPEWLSISQVADAKGSVQNYVAVFTDITQRKLSEERLQFLANHDALTHLPNRAL 701 Query: 340 LEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L++ + + + +D + ++ G ++ + L ++E + Sbjct: 702 LQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETD 761 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E ++++ L + + ++ L + + + Sbjct: 762 TVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDG 821 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL ++ + + + + L N +R A+++ + +L+ Sbjct: 822 LDTASLLKHADAAMYRAKESGKN-TFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHY 880 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G+++P +F+PL + L ++ + Sbjct: 881 QPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVE 940 Query: 566 HPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + R +VNL + + I ++P + LEITE NAE + Sbjct: 941 WQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAR 1000 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ H G + IDDFGTGY+++ LK D +KID FV+DI + D I ++I Sbjct: 1001 EVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAII 1060 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 +A + + VVAE VETQ+Q A L K G +QG+L P Sbjct: 1061 AMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPL 1101 Score = 56.2 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 85/318 (26%), Gaps = 25/318 (7%) Query: 18 FTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLW 77 ++ V + L ++ I ++ L L+IL +FG+R + G T+L Sbjct: 20 LSIIVFVYCLLGSLNLWIPIPDAWATLISPTAGFSLAILLVFGYRAWPAIFMGSLFTHLH 79 Query: 78 NFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIK 137 T + + ++ C + L R+ + L + I Sbjct: 80 ATVYYVAATMAVGDTLETLLAC------YLLKQVARFDPALIRLRDFLTLVFFAVGISPL 133 Query: 138 CSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQ 197 S + +T ++ + D S ++Y P Sbjct: 134 VSALINVLMLVVVGADTTALANSFTNSWLEDAFSYLLFTPAVLAFYHY------EPIRWS 187 Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + G + L+ L A+ + L P + F + + Sbjct: 188 WARVGEALILAGLVVFSCLLTMLGAMDKSMSQLMQPQAF---------MLFPLIMWAALR 238 Query: 258 L---RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 L A++ L + + +L ++ S + + + Sbjct: 239 FHQRGAALSVLFVAMTALWGGAHGLGTFAHDFAQSNLLDYWMYVLVLSSTGVALSGLNAG 298 Query: 315 SEWLNRRW-HLQALTDPL 331 R D L Sbjct: 299 RIRSEARLKEQLDTYDAL 316 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 89/462 (19%), Positives = 186/462 (40%), Gaps = 18/462 (3%) Query: 282 LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 L+ +Y + V ++ + + A D LT LPN Sbjct: 341 LKLSGNDYYITLSPIEENGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRTLFH 400 Query: 342 Q--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + A +++ + +D + ++ G + ++++ L+ +++ + + Sbjct: 401 EKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSV 460 Query: 394 YQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 +L G E + L+G + I+ S I ++ + + + + + + Sbjct: 461 SRLGGDEFAIFLTGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDI 520 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL + E + K++ L +R ALD+ L+ QP Sbjct: 521 EALLKHADAAMYLAKEQGKN-NYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPK 579 Query: 512 R---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC 568 + G + ++ D G++ P +F+P+ + L V+ + + Sbjct: 580 IHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQE 639 Query: 569 DKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 +VN+ +Q N+ I + + ++PQ + LEITE A N + ++ + Sbjct: 640 AGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRIL 698 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 +L G I+IDDFGTGY++ L + D +KID F++++ N + I+++I +A Sbjct: 699 NRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMA 756 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++V+AE VET + L + +QGY +P P + Sbjct: 757 HNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKE 798 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 90/470 (19%), Positives = 180/470 (38%), Gaps = 24/470 (5%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + V+ + + + R A D LT LPN R Sbjct: 396 RKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRL 455 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + L +D + ++ G + + + ++E + Sbjct: 456 FTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVREGD 515 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L + + + + + + ++ L + + + Sbjct: 516 TVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDG 575 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T++ L+ ++ + ++ ++ +++ + +++R AL + + L Sbjct: 576 TTVEALIKNADTAMYRAKDLGRN-SYQLYTAAMNARSFERLTMESSLRHALTREEFRLVY 634 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + G + ++ + G+++P F+PL + + VL + + Sbjct: 635 QVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKH 694 Query: 566 HPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R +VN+ ++ ++ + R + + PQ + LE+TE + + Sbjct: 695 WMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELELTETVLMQRVDEVV 754 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN-----TLDAMI 679 ++ L G RI+IDDFGTGY++ LKR+ D +K+D FV DI A I Sbjct: 755 AVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEI 814 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V +I +LA L +AE VET +Q L G +QGYLI RP D Sbjct: 815 VSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGED 864 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 105/488 (21%), Positives = 183/488 (37%), Gaps = 21/488 (4%) Query: 261 PFLNLTWAVSTL-CLLNYNQNFLQGVETEYSLAFILAVLIS----FSVCLLYMVRIYHRS 315 P WA+ + ++ Y ++ + + + Sbjct: 314 PDSRTVWAIVGEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDITAR 373 Query: 316 EWLNRRWHLQALTDPLTLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHY 367 + A D LT L N +L +A + L +D + ++ Sbjct: 374 KRAEADIQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSL 433 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 G + ++ + R L ++E + + +L G E ++VL G + H+ L ++ Sbjct: 434 GHPVGDELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSA 493 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + T L F + L+ + A + ++ Sbjct: 494 PYCVDTTELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAK-FQFYTDEMNRA 552 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPL 541 T ++ L +R A+ +G+ L+ QP + G + ++ G++ P +F+PL Sbjct: 553 ATARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPL 612 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + + VL + R SVNL L +K + + Sbjct: 613 AEETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAAS 672 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P + LEITE N + ++ ++ L G RIAIDDFGTG+++ LK D + Sbjct: 673 GLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHL 732 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F+ DI + D MIV + LA LSV+AE VE+ Q A L +LG LQG+ Sbjct: 733 KIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFH 792 Query: 721 IGRPQPLA 728 RP Sbjct: 793 FSRPVTAD 800 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 115/659 (17%), Positives = 220/659 (33%), Gaps = 52/659 (7%) Query: 109 GTRWRYGLTSRYVW-QRLFWLGLVTP---IGIKC---SMYLVGSFFDFPLKISTFFGDAD 161 G T + R FW + + Y G+ PL Sbjct: 493 HEPGGSGPTGIALREDRPFWCQDFANDPVTAVWHERAAEYGWGASASIPLHCHGIVVGTL 552 Query: 162 AIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEK--RAFTLSW 219 ++ L M + FA + + E + Sbjct: 553 TLYA-------EEKNAFDEPARNLLLEMAMDISFALERFDAETERKKMSETLLKLSLAVE 605 Query: 220 LAALSVLLLLLCT---PYENDF--IAGYLVPVFF----IIFTLGVGK-------LRYPFL 263 + S+++ L ++F + GY + G + Sbjct: 606 QSPNSIVITDLDANIEYANSNFTKVTGYSLDEVLGKNPRFMQSGKTPKATYEDMWAHLTR 665 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 W +++ V L ++ + + L + R Sbjct: 666 GEPWKGELFNRRKDGTEYIESV-----LISPVSQVDGRVMNYLAIKEDITEKRLTEERIE 720 Query: 324 LQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 D LT LPN L + + L +D+ + ++ G + Sbjct: 721 KLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQL 780 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGL 433 + + + L +++ + + + G E +L+L G + G ++ S+ + L Sbjct: 781 LMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGAAHVAAKLMEAVSQAFQFEQHEL 840 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 + + E + L + + + + + L N Sbjct: 841 VATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRN-GFCFFTSEMQAHSARTLQLGN 899 Query: 494 TIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR 550 +R AL +G L L+ QP + G + +L + G ++P +F+P+ Sbjct: 900 ALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIP 959 Query: 551 FDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + +K L +VNL Q N+ + + + + + L Sbjct: 960 IGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLEL 1019 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE A + + ++ +++LH G +++IDDFGTGY++ LKR + +KID FV D Sbjct: 1020 ELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHD 1079 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I + D IV +I ++A + + +AE VET Q + L G +QGY +P P Sbjct: 1080 ITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAE 1138 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 135/728 (18%), Positives = 260/728 (35%), Gaps = 47/728 (6%) Query: 47 MPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRW 106 + + L+ + + R VVP + L V + A R Sbjct: 76 LITSISLAAILAYIQRTVVPSSELLVWCLLMVLASLLRAALVYSPQTLRLDDAAAVQARL 135 Query: 107 QLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMY-LVGSFFDFPLKISTFFGDADAIFT 165 Q + + L P + ++ L G + S A A Sbjct: 136 QKFRIGVVVAGAVWGSAGLLLFPAHHPQYVMFLIFTLAGMTAGGVISFSADLVSAVAFSV 195 Query: 166 VVDLLSLF--------TAVLIYNMLFYYLTRMIVSPHF----------AQILWRRDIAPS 207 ++ L + + + YL MI S +I Sbjct: 196 LLSLPVAIRLFVTGDHLSEAMGVAVLLYLGFMIASIRRINQNICENIILRIEAAAREGKV 255 Query: 208 LGKEKRAFTLSWLAALSV------LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK-LRY 260 E+R L + + L++ C + + + V + L + + Sbjct: 256 RESEERYRLLLSHLPVGIFHYNTDLVITYCNDRLAELLHNSVEHVIGLDMKLVKDQAILP 315 Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNR 320 + +Y + Y + +V+ + Sbjct: 316 SLRKALEGERSNFEGHYLATYSDAEGWAYITCTPFHDHNGQIAGGIAIVQDITEHKAAEE 375 Query: 321 RWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMR 372 + + A DPLT LPN R L + + + +DN + ++ G M Sbjct: 376 KINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALNDTLGHDMG 435 Query: 373 VHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---R 424 +R + + L ++E + + +L G E +++L E + + + + + Sbjct: 436 DLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGEKILAMLGL 495 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 F G++ + LL + Q+ + ++ + Sbjct: 496 PYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQAGRN-TVRFFDQQMQDA 554 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLI 542 T +V L + ALD+ L+ Q + G G + ++ + + G++ PD+F+ + Sbjct: 555 VTARVALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALIRWMHPERGLVPPDQFIGMA 614 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + +L V+++ L T +VN+ Q + ++ +R+ Sbjct: 615 EETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQRH 674 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 I P+ + LE+TE N E ++ + L + G + ++DDFGTGY++ + LKRL D I Sbjct: 675 AIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQI 734 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV+DI +++ D IV +I +A+ L V+AE VET++Q+ L G + QGYL Sbjct: 735 KIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYL 794 Query: 721 IGRPQPLA 728 G+P P+ Sbjct: 795 FGKPVPVE 802 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 104/457 (22%), Positives = 185/457 (40%), Gaps = 16/457 (3%) Query: 287 TEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 TE+ + + + + R H A DPLT LPN L + Sbjct: 368 TEHLTITGIRGPDGTFTHYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGA 427 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 Q + L +D +F++ G + ++++ L ++ ++ + +L G Sbjct: 428 ALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGG 487 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +VL + L R + + + + + + T + L Sbjct: 488 DEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLR 547 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 ++ ++ T ++ L + + AL + + L+ QP + Sbjct: 548 MNADTAMYRAKERGKN-NFQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLA 606 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKK 571 G + +L ++ G ++P F+P+ + NL + VLE + Sbjct: 607 HGHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLL 666 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL + Q +I + R+ + ++ + LEITE A N + ++ L Sbjct: 667 PGTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLK 726 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G RIAIDDFGTGY++ LK+L D++KID FV D+ + DA I +I + ++ + Sbjct: 727 ALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLN 786 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VAE VE ++ + L G QY QGYL RP P A Sbjct: 787 LQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAA 823 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 127/711 (17%), Positives = 235/711 (33%), Gaps = 65/711 (9%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY--- 120 V V+ G+ C L L A + G LC G R + S Sbjct: 266 VAGVVLGIGCAVLEFLQLRGRVRAAIGGFVVLSALCFLGSAWHATGYRAGAAVLSVLAVA 325 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 L ++ +G+ T G F+VV L L Sbjct: 326 TMVLLVRGVFSGDASLRLFTLGLGA---------TMVGGGVQAFSVV-GSGLEVGRL--- 372 Query: 181 MLFYYLTRMIVSPHFAQILW----RRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTP 233 F + + F R + E + + W +L++ +C Sbjct: 373 AAFAFPLGSLCQAAFWLAALIIRLRSEHRELHELEGKQAAIMWAMPDLILVIDRQGICLD 432 Query: 234 YENDFIAGYLV--------PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 Y+ + + V V ++ + G +R + ++G Sbjct: 433 YKQPYATRFFVTGDELLGKDVSAVLPSATAGTIRQGIERALHQGDLQSVF--LDLPVEGS 490 Query: 286 ETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 Y + ++ +VR + + A D LT LPN ++ + Sbjct: 491 MHHYE----ARIAPHGPDKVVVVVRDITLQKHSEEKIRRLAYFDTLTGLPNRQSFLERLD 546 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ-- 395 + L +D + ++ G ++++ L ++ + + Sbjct: 547 RELLRARRTNHRMALLFLDLDGFKRINDTLGHSAGDCLLQTVADRLQEKLRAGAFIARPA 606 Query: 396 ----------LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWG 442 L G E +VL +T + + R + + Sbjct: 607 LDESSLHFARLGGDEFTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEIAVTSSIGIA 666 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F + LL + + ++ +TT ++ L IR L++G Sbjct: 667 LFPDDGADAATLLKHADTAMYYAKEQGRN-NWQLYDRTLTTRTTARLALEGDIRKGLERG 725 Query: 503 DLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESL 559 + L+ QP + G + ++ G+++P +F+P+ + L VL + Sbjct: 726 EFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTAA 785 Query: 560 LKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + PR +VN+ L + + I+ + LE+TE Sbjct: 786 CRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTESILMD 845 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + +L G +IDDFGTGY++ +KR +KID FV + + DA Sbjct: 846 PEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDAG 905 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +I +A++ +L VVAE VET++Q A L + LQGYL P P + Sbjct: 906 ITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDE 956 >UniRef50_P23842 Uncharacterized protein yfeA n=98 Tax=Enterobacteriaceae RepID=YFEA_ECOLI Length = 729 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 729/729 (100%), Positives = 729/729 (100%) Query: 1 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG Sbjct: 1 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG 60 Query: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY Sbjct: 61 WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY 120 Query: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN Sbjct: 121 VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA Sbjct: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 Query: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS Sbjct: 241 GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS 300 Query: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL Sbjct: 301 FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL 360 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI Sbjct: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 Query: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM Sbjct: 421 LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP Sbjct: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP 540 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY Sbjct: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII Sbjct: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL Sbjct: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 Query: 721 IGRPQPLAD 729 IGRPQPLAD Sbjct: 721 IGRPQPLAD 729 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 108/500 (21%), Positives = 189/500 (37%), Gaps = 31/500 (6%) Query: 258 LRYPFLNLTWAVSTLCLLNY-----NQNFLQGVETEYSLAFILAVLISFSVCLLY---MV 309 W + N + + + ++ + L + + Sbjct: 245 FPRDIAQSMWDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVCTIG 304 Query: 310 RIYHRSEWLNR-------RWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCC 354 + R + A D LT LPN + + Sbjct: 305 TDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALML 364 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L ID + ++ G +++I L +++ + + +L G E ++VL G + Sbjct: 365 LDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDV 424 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + N L SR + + + F + LL ++ Sbjct: 425 IFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKN 484 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKY 528 + ++ +LL N +R A++Q L LY QP + + G + ++ Sbjct: 485 NC-QFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHP 543 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQK 587 + G+++P F+PL + L VL K K + +VNL P QK Sbjct: 544 ERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQK 603 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N G++ + + + + + LEITE A +A ++ + QL++ G +AIDDFGTGY+ Sbjct: 604 NFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYS 663 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + L+R +KID F+ DI + DA I ++I LA L VVAE VET+ Q Sbjct: 664 SLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEW 723 Query: 708 LHKLGVQYLQGYLIGRPQPL 727 L G +QG+L +P Sbjct: 724 LRAKGCDQVQGFLYAKPMTA 743 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 128/654 (19%), Positives = 228/654 (34%), Gaps = 27/654 (4%) Query: 99 CACAILRWQLGTRWRYGLTSRYVWQRLFW--LGLVTPIGIKCSMYLVGSFFDFPLKISTF 156 A L Q L LGL+ + + + Sbjct: 278 LGWASLVRQDVNTAFAPARQLQQHIWLVGAALGLLFAWLGWLMAGRIARPISLISQAADK 337 Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 D + + L + + + + + + + E Sbjct: 338 VAGGDLEYELPARLGEGEVAHLSTAIHDMVVNLTHEIKQRKEAEQGLRLSAKVFESNTEA 397 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVP--VFFIIFTLGVGKLRYPFLNLTW-AVSTLC 273 + A +++ I GY + L G+ F W A+ Sbjct: 398 IMITDAEQNIVM---VNQAFTQITGYGADEVLGQRPKLLSSGRHGPEFYEAFWHALRAND 454 Query: 274 LLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDP 330 L + + ++ L + + + + R + A D Sbjct: 455 LWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLDITERKKEEERINYLANYDV 514 Query: 331 LTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN L + + +D + ++ G + ++ + Sbjct: 515 LTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAAR 574 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGA 439 L ++ ++ + +L G E + +LS ++ + + + + L + Sbjct: 575 LKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPSI 634 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + ET LL Q+ ++ + +++ L +R A+ Sbjct: 635 GICIYPDDGETSVELLRNADLAMYQAKDDGRN-NFKFYSPDMNRKALERLKLETFLRVAI 693 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 Q L +Y QP + + G + +L + G ++P F+P+ + L VL Sbjct: 694 VQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIAEETGLINEIGDWVL 753 Query: 557 ESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 +VNL L Q N A R++ + + + ++LEITE Sbjct: 754 RQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAGLDAHYLVLEITESM 813 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 S ES + +EQL G R+A+DDFGTGY++ RLK L D +KID FV+DIVT+ Sbjct: 814 LMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPN 873 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA IV + LA A +L V AE VETQ+Q + L + QGYL RP P ++ Sbjct: 874 DASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASE 927 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 108/472 (22%), Positives = 192/472 (40%), Gaps = 19/472 (4%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL---YMVRIYHRSEWLNRRWHLQALTD 329 + N+ + ++ + + LL V + QA D Sbjct: 219 VVTNFESRVHRRNGEVIWISENARSVYNSDGTLLFFEGTVEAITERKLHEAEIQFQATHD 278 Query: 330 PLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN L +Q + L +D +F++ G + ++ + Sbjct: 279 ALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQ 338 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYG 438 L ++E++ + + G E +L+L+ E + H + + S+ N+ + Sbjct: 339 RLTSCLRESDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCS 398 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + LL ++ ++ T ++ LLN +R A Sbjct: 399 IGLTLCPDDGRDAETLLKNADSAMYKAKELGRN-NFQYFSAEMNSSVTDRLELLNRLRQA 457 Query: 499 LDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 + D +L+ QP + + G + ++ G+++P F+PL + L V Sbjct: 458 ITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWV 517 Query: 556 LESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + + SVNL P L + +I + R+ + Q + LEITE Sbjct: 518 LRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITES 577 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 ++ E S + QL G +I++DDFGTGY++ LKR D +KID FV+DI T+ Sbjct: 578 VMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQ 637 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 A IV++I L + +L+V+AE +ET+ Q L G QGYL+ +P P Sbjct: 638 DSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVP 689 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 93/465 (20%), Positives = 176/465 (37%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + + Y ++ + + + + + A D LT LPN Sbjct: 925 RKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKAAEEKISHLAHFDTLTDLPNRSN 984 Query: 338 ------RALEQAPE--QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 +AL A + L +D + ++ G + + + L +++ Sbjct: 985 LQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRD 1044 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGN 447 ++ + +L G E ++VL+G + + IL SR L F + Sbjct: 1045 SDVVARLGGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPAD 1104 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E+++ L+ + + ++ + + L + AL Q +L+ Sbjct: 1105 GESVEVLMQNADAAMYHAKSAGRNNV-QFFTASMNEAASDRRQLEEDLHLALQQKQFVLH 1163 Query: 508 AQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + +L G++ P +F+PL L VLE+ + Sbjct: 1164 YQPQVDAQRRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKA 1223 Query: 566 H--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + + +VN+ Q + + + +P + LE+TE N + Sbjct: 1224 WSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADT 1283 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + + G ++DDFGTGY++ L RL D +KID FV + N DA+I ++I Sbjct: 1284 IDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTI 1343 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + ++ L VVAE VET+ Q+ L G QG+L RP + Sbjct: 1344 VTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVD 1388 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 108/465 (23%), Positives = 190/465 (40%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + L+V+ + + + R + R A D LT LPN Sbjct: 345 RKNGEIFPELLTLSVVRDHNGKVSHYVGVFSDISRMKETEARLQRLAHYDALTDLPNRVL 404 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + L ID + ++ G + + I R L ++ + Sbjct: 405 LNLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAED 464 Query: 392 KLYQLPGSELLLVLSGPETEGR----LQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 L +L G E +++L + Q ++++LN + + +G + + Sbjct: 465 TLARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLD 524 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + L+ Q+ + ++ +++ L +R L++G+ +L+ Sbjct: 525 TDDATQLISNADAALYQAKEAGRNV-YRFYTADLTRAAHERLGLEAALRRGLERGEFVLH 583 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ E G + ++ G++ P +F+PL + L VLES + Sbjct: 584 FQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGR 643 Query: 565 THPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VNL ++ + + R + LEITE +A+ ++ Sbjct: 644 EWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAV 703 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L G R++IDDFGTGY++ LKR D +KID FV+DI + D MIV ++ Sbjct: 704 ATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVV 763 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L V+AE VET +Q A L LG + QGYL+GRPQ AD Sbjct: 764 AMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAAD 808 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 93/437 (21%), Positives = 174/437 (39%), Gaps = 16/437 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCL 355 ++++ + R A D LT LPN + L +A + + Sbjct: 376 HYVWILADITERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFI 435 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + +R + L L++E + + +L G E +++L + Sbjct: 436 DLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAA 495 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S I L F + +L + A Sbjct: 496 IVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRN- 554 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 ++ +++ + +R A+ + +L L QP + G + +L Sbjct: 555 NYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPT 614 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKN 588 G+++P +F+P+ + + VL + +A K R +VN+ L +++ Sbjct: 615 DGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRD 674 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + + + + LEITE N + +++ +E+L + G +AIDDFGTGY++ Sbjct: 675 FCETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSS 734 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK D +KID FV DI + D I LA + L+V+AE VET+ Q LL Sbjct: 735 LAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELL 794 Query: 709 HKLGVQYLQGYLIGRPQ 725 G +QG+L +P Sbjct: 795 RANGCDEVQGFLFSKPL 811 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 105/457 (22%), Positives = 184/457 (40%), Gaps = 17/457 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA-------- 339 + +A + ++ + + R DPLT LPN R Sbjct: 600 QILTINTVADSQGRPSHYVGVMTDISQLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHA 659 Query: 340 LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 LE+A Q + + +D + ++ G + + R L ++E++ L +L G Sbjct: 660 LERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGD 719 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLL 455 E L++L + + L S + H N L +G + + T+ L+ Sbjct: 720 EFLVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLI 779 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-- 513 Q+ ++ +++ L + AL + +L+ Q + Sbjct: 780 QHADVAMYQAKEEGRN-TYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMR 838 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK- 571 G + ++ G++ PD+F+PL + L VL + Sbjct: 839 DGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLT 898 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VNL L ++ R+ R+ + + + + LE+TE E ++ + L Sbjct: 899 DLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALK 958 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 G R++IDDFGTGY++ LKRL D +KID FV+DI ++ D I +I +A+ Sbjct: 959 ALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLR 1018 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+V+AE VET +Q L + G QGYL GRP P Sbjct: 1019 LNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAE 1055 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 102/494 (20%), Positives = 196/494 (39%), Gaps = 18/494 (3%) Query: 252 TLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS--VCLLYM 308 L G+ F W ++ +L + + Y +++ + + Sbjct: 897 LLASGRHDQAFYQSMWESIESLGHWQGEIWNRRKDGSVYPEWLLISRVDGDGAPTHYIGT 956 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNL 360 + + A D LT LPN LE+ + + +D Sbjct: 957 FIDITQHKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRF 1016 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + + L +++ + + +L G E ++VL + +G + Sbjct: 1017 KNVNDSLGHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKL 1076 Query: 421 LN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 L + L A + + E+ + L ++ A Sbjct: 1077 LEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRN-AYCFFT 1135 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTP 535 + ++ + + + N +R AL+ G+L L+ QP ++ G + +L G+++P Sbjct: 1136 AEMQERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSP 1195 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRII 594 +F+P+ + L VL + + L + +VNL + Q ++ + Sbjct: 1196 VEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVS 1255 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 R+ ++ Q + LE+TE A N +++ +++L G R++IDDFGTGY++ LKR Sbjct: 1256 RILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKR 1315 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 + +KID FV D+ + D IV + LA+ L +AE VE++ Q A L G Sbjct: 1316 FRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCD 1375 Query: 715 YLQGYLIGRPQPLA 728 QGYL RP A Sbjct: 1376 EAQGYLFSRPLAPA 1389 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 97/463 (20%), Positives = 188/463 (40%), Gaps = 18/463 (3%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + TEY ++ L L + + + R A D LT LPN Sbjct: 827 RKDGTEYVELARISPLRHTDGRVTNYLSIKEDITEQKQVEARIRQLAHFDLLTGLPNQTL 886 Query: 340 LEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + L ID+ + ++ G + + + + + L+++ + Sbjct: 887 LKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDED 946 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQE 449 L + G E +LVL + +G IL ++ + L + + + Sbjct: 947 TLSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGM 1006 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 L ++ + ++ +++LL N +R AL + L+ Q Sbjct: 1007 DFDKLYQSADVAMYRAKQDGRN-NFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQ 1065 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + G + +L + G ++P +F+P+ + L VL + ++ + Sbjct: 1066 PQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRW 1125 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 ++NL + Q ++ ++++ +++P + LE+TE A N ++ Sbjct: 1126 QDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIG 1185 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + LH G R++IDDFGTGY++ L++ + + +KID FV+D+ + IV +I Sbjct: 1186 VMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIIT 1245 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + +AE VET Q A L G +QGY RP +A Sbjct: 1246 LASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVA 1288 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 106/598 (17%), Positives = 225/598 (37%), Gaps = 19/598 (3%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 F + G+ I V+D ++ + +L + R+ + ++A S+ Sbjct: 442 FGAPLVAPSGETIGIIAVMDKKAMDIEEWVKPVLGLFANRVALELQRQSTHKEMEMAASV 501 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 KE + + +L + + +V ++ N A Sbjct: 502 FKESAEAIVICDSEDKILRVNPAFYKITGYSQIEVVGQ-SPQLLQSDRPIQSMLHNREAA 560 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQ 325 + + + + + + + + ++Y+ + + Sbjct: 561 LKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITERKLFEEHIYNL 620 Query: 326 ALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN ALE+A + + + +D+ + ++ G + ++ Sbjct: 621 AHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQ 680 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLD 434 + +++ + + + G E ++LS T+ + L + ++ + Sbjct: 681 QVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVV 740 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + G F N +++ L+ ++ + ++ +++ L Sbjct: 741 ISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRN-CFQFYTKEMNQYAQERLELELD 799 Query: 495 IRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFD 552 +R AL++ + +L+ QP + G + ++ D G+++P +F+ + L Sbjct: 800 LRKALERDEFVLHYQPQFDPNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIG 859 Query: 553 LQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEI 611 V+++ SVNL L ++ + I+P + LE+ Sbjct: 860 KWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELEL 919 Query: 612 TEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIV 671 TE N E ++ + + G ++IDDFGTGY++ LKR + +KID FV+ + Sbjct: 920 TESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLP 979 Query: 672 TNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D IV+SI +A A +L+V+AE VET +Q L + QGY RP AD Sbjct: 980 QDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAAD 1037 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 98/324 (30%), Gaps = 33/324 (10%) Query: 5 HNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGV 64 L +++ L TL+ V LS + + + W P + +S + IFG+R Sbjct: 4 EKLKHHLRYLALCATLSFVYY-LSGRLGLSLAFEQAGVSPVWPPTGIAISAVLIFGFRVW 62 Query: 65 VPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR 124 ++ G NL + LG+ ++ ++R T Sbjct: 63 PGIMLGALLVNLSIALPFSAAILIALGNTLEAIVAGYLLIRCAERYP----FTQVNHTAW 118 Query: 125 LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVD-LLSLFTAVLIYNMLF 183 + ++ P+ + L + ++ L L+ L Sbjct: 119 FIAIAVMAPM-------FSATIGLVSLSMHNLIEASELGIVWSTWWLGDIVGALVIVPLL 171 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 +R + + G A + L +L + LL+ +P+ ++ L Sbjct: 172 -------------LTWFRPHESMNGGVPVMALWGTCLVSLGLALLIF-SPWHTEYDPHQL 217 Query: 244 VP-VFFIIFTLGVGKLRY----PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + + + + + ++ L F+ + L +V Sbjct: 218 LIFMMLPLLIWTALRFHHRGSTLLVTVFSGIAISGTLVGYGPFVMESTNQSLLTLQASVG 277 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRW 322 L+ + + +NRR Sbjct: 278 AIMVTILILIAS-QEERKRVNRRL 300 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 102/558 (18%), Positives = 211/558 (37%), Gaps = 24/558 (4%) Query: 195 FAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVPVFF--- 248 + + + R + + ++ L + + GY + F Sbjct: 283 TLKNYLLYEERQKSEERYRYLFQNANDPIFIIDRELKFINVNRRAMDLFGYGLDEFVAMN 342 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL--L 306 ++ + ++ L S L + N ++ + + + + + Sbjct: 343 MVDLVPEEQIPRIQGELKKMESMEALDKLSTNIRTKWGYSLNVEISSSPFVERNNVMGSI 402 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRID 358 ++VR S+ + QA D LT L N ++ L +D Sbjct: 403 HIVRDVTESKKMEDEIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDLD 462 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 + ++ G ++ I L ++E + + ++ G E ++++ + Sbjct: 463 RFKSINDSLGHAAGDKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAIA 522 Query: 419 NILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 N + S + + L + + + E + LL + Sbjct: 523 NKILSSMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRN-NYQ 581 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 ++ +T ++V + N +R AL++ +L++ QP + G + ++ L + G+ Sbjct: 582 FYNPALNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLHPELGL 641 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 ++P F+P+ + D VLE+ + + +VN+ + ++ Sbjct: 642 LSPGHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRRPDLVD 701 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 ++ R+ + P+ + LEITE A + E ++ ++ L AIDDFGTGY++ Sbjct: 702 QVRRVLNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSSLSC 761 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LK+L +KID F+ + T+ D IV +I +A L V+AE VE Q LH+ Sbjct: 762 LKKLPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFLHQN 821 Query: 712 GVQYLQGYLIGRPQPLAD 729 +QG+L RP P D Sbjct: 822 HCDQMQGFLYSRPIPAED 839 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 120/587 (20%), Positives = 220/587 (37%), Gaps = 34/587 (5%) Query: 175 AVLIYNMLFY-------------YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLA 221 +I M FY L ++ FA + ++ L + A + + Sbjct: 449 GNVIGVMFFYSNVLNAFTESSQRLLLELVEDIDFALEHFEKEEQLQLSAQIFAQSSEGIM 508 Query: 222 ALSVLLLLLCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYN 278 L ++ I GY R + + A+ T Sbjct: 509 LLDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQHDRNFYATMWEAIETEGRWQGE 568 Query: 279 QNFLQGVETEYS---LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + Y L + + + R A DPLT LP Sbjct: 569 VWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLP 628 Query: 336 NFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N L A + + L +DN + ++ G + ++ + L+ + Sbjct: 629 NRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAV 688 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFD 445 +E + + +L G E +LVL G +T+G +LN +RQ + +++ + Sbjct: 689 REQDTISRLGGDEFVLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYP 748 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + L ++ + ++ + + + N +R AL++ Sbjct: 749 TDGTDFDTLWRSADAAMYRAKQSGRND-YCFFTTEMQARSARTLQIDNALRRALERNQFS 807 Query: 506 LYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L QP + G++ ++ G PD+F+P+ VL++ ++ Sbjct: 808 LVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQ 867 Query: 563 LATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 L + SVNL + + ++ + + +SP+ + LE+TE A N Sbjct: 868 LRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPL 927 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 +++ I++L K G RI+IDDFGTGY++ LKR +KID FV+D+ +T D IV Sbjct: 928 AAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVS 987 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ LA + + VAE VET++Q L G +QGY + RP Sbjct: 988 AVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQAD 1034 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 103/487 (21%), Positives = 193/487 (39%), Gaps = 22/487 (4%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS-VCLLYMVRIYHRSEWLNRR 321 L+L V + + N ++ + + + +R + Sbjct: 399 LDLLSTVDGIEGASAEVNGRHANGAIRPISVSASRIPHTEHDTFVVTLRDITQQRQDEEE 458 Query: 322 WHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRV 373 A DPLT LPN R L Q + L +D+ + ++ G + Sbjct: 459 IRRLAFYDPLTGLPNRRLLMDRVRQAMVNSARLGQHGALMFLDLDHFKLLNDTLGHDVGD 518 Query: 374 HCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN---SRQ 425 ++ + L ++E + + +L G E +++L G + + + + + + + Sbjct: 519 ELLQQVAYRLRNCVREGDSVARLGGDEFVVLLEGLSDNRTDAANQAEVVAHKILDALALP 578 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 G + F + ET+ LL + Q+ A A + ++ Sbjct: 579 YSLRGHGYNSTPSIGIVVFMEDHETMDDLLKKADVAMYQAKAAGRNTA-RFFDPVMQAAV 637 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYDEILARLKYDGGIMTPDKFLPLIA 543 T L IR L + + +L+ Q + +G G + ++ G+++P F+PL Sbjct: 638 TTHAELAKEIRLGLQRHEFVLHYQVQIDSQGRCTGAEALVRWNHRVRGLVSPAHFIPLAE 697 Query: 544 QFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + + V+ES + L + +VN+ L Q + +R Sbjct: 698 ETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQPEFVASVREALQRSG 757 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + LE+TE + E + + + + G ++DDFGTGY++ LKRL +K Sbjct: 758 APAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSSLSYLKRLPLSQLK 817 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV+D++T+ DA+I R++ L + L+V+AE VET +Q+ L + QGY Sbjct: 818 IDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYF 877 Query: 722 GRPQPLA 728 GRP P Sbjct: 878 GRPAPAD 884 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 109/563 (19%), Positives = 219/563 (38%), Gaps = 24/563 (4%) Query: 185 YLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLV 244 R + H + I ++ T+++ +L L E + + L Sbjct: 287 KAYRELRKQHEWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLGL---SEEEILGKKLD 343 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC 304 + + + P + S + L + + + + +A + + S Sbjct: 344 KLLSGLVDKREKVYKIPIEEVVNRGSMIKL-ETDLSLVTPGGRRL-VEGTVAPIRNDSDV 401 Query: 305 LLYMVR---IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 ++ V + + + DPLT LPN + Sbjct: 402 IIGTVVALKDITEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALI 461 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +DN + ++ G + ++ + + ++E + + ++ G E +++ + Sbjct: 462 ILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQIKDIND 521 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + + + + G + E Q + ++ Sbjct: 522 ATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGR 581 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 E ++ + +++ + N++R A+++ + +L+ QP + + G++ +L Sbjct: 582 N-NYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYH 640 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQ 586 D G+M P +F+P+ L VLE+ + P SVNL + Sbjct: 641 PDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQR 700 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 NI I R+ ++P+ + LEITE A + ++ + QL K G R+++DDFGTGY Sbjct: 701 SNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGY 760 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ L++L D +KID FV+DI N+ + I +++ LA L+VVAE VET++Q Sbjct: 761 SSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLL 820 Query: 707 LLHKLGVQYLQGYLIGRPQPLAD 729 L K QGYL +P P + Sbjct: 821 FLKKEKCDKAQGYLFSKPLPAEE 843 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 116/693 (16%), Positives = 231/693 (33%), Gaps = 39/693 (5%) Query: 71 MFCTNLWNFHLSFLQTAVMLGSQTFVVLC--------ACAILRWQLGTRWRYGLTSRYVW 122 + N ++ + +LG ++ C + + + G R L + Sbjct: 169 ISYANAAFAQITGIPAVDLLGRSLTLLACEGEDGQTCTAMVSQMRTGGSMRRTLRCQRPD 228 Query: 123 QRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLS-LFTAVLIYNM 181 LFW + + + + + L + Sbjct: 229 GSLFWNDVTLSPIFNERGEISQCIAVLADATALKESEQALRRSRDALERQVEARTENLTE 288 Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 + L R I + R ++ A W + + + Sbjct: 289 VVRQLRREIEERTRVESALRLSEQRLANAQRIARLGHWE----WEIATGRLYWSAEVYNL 344 Query: 242 YLV------PVFFIIFTLGVGKLRYPFLNLTWAVSTLCL-LNYNQNFLQGVETE---YSL 291 + P + + G R L + +E + Sbjct: 345 LGLGPEFTTPDYERFLEMIPGDDRQRLQEAIARCLEHGLPYEIDHRITCPDGSERILHED 404 Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ----- 346 ++ + L + R A DP+T LPN + + Sbjct: 405 GELVYDDEGKPLLLRGTAQDITERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANA 464 Query: 347 ---EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +D + ++ G MM +R LL ++E + + + G E ++ Sbjct: 465 TRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAERLLGCVREGDTVARFGGDEFII 524 Query: 404 VLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 +L E + + R + + E + L+ Sbjct: 525 LLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADS 584 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 + A ++ + +++LL N + AL+ G ++ QP + Sbjct: 585 AMYLAKAQGGA-GYRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHYQPQMDLRSGRIC 643 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 G + ++ + G++ P +F+P+ L VL + + + S Sbjct: 644 GVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLS 703 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL P ++ G + R+ + + + LEITE + E ++ + ++ + G R Sbjct: 704 VNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLGVR 763 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTG+++ LKRL +KID FV I ++ DA I ++ L + L V+A Sbjct: 764 VSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIA 823 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q + L + G +QG+ I RP P + Sbjct: 824 EGVETREQASFLREHGCDAVQGFFIARPMPAGE 856 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 87/443 (19%), Positives = 186/443 (41%), Gaps = 15/443 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + + + A DPLT L N L + Sbjct: 1013 GNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLA 1072 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D+ + ++ G + + + + +L ++++ + + + G E ++VL Sbjct: 1073 LLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDTGEN 1132 Query: 412 GRLQHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 G + IL S Q++ L + + + + LL Q+ Sbjct: 1133 GAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDG 1192 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARL 526 + + +++ + + + +R AL LY QP + G + ++ Sbjct: 1193 RNV-YRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIRWN 1251 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLL 585 + G ++P +F+P+ Q VL + ++ + K + +VNL + Sbjct: 1252 HPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQFR 1311 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 +++ +++++ + +SP+ + LE+TE A +N E+ + +++L G +++IDDFGTG Sbjct: 1312 YEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGTG 1371 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR + +KID F++D+ ++ D I+ +I L+KA L +AE VETQ Q Sbjct: 1372 YSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQL 1431 Query: 706 ALLHKLGVQYLQGYLIGRPQPLA 728 L + +QG+ + Sbjct: 1432 DFLQEKQCDEIQGFYYSKALTPE 1454 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 106/490 (21%), Positives = 201/490 (41%), Gaps = 22/490 (4%) Query: 255 VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHR 314 + +W + + + + V + L + Sbjct: 366 ADMWAHLGRGESWQGEFINRRHNGEERIDLVRVS-----PVREADGRITHYLAIEEDITN 420 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRH 366 + R A D LT LPN L++ ++ + L +D+ + ++ Sbjct: 421 QKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDT 480 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR---LQHMVNILNS 423 G + + + + L +++ ++ L +L G E +L+L G E Q ++ +N Sbjct: 481 LGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAKKIAQELMRAINE 540 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 + L++ + + + L ++ A S + + Sbjct: 541 -PYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRN-AYRSFTQEMQA 598 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLP 540 +T+ + +LN +R A+ Q L ++ QP + + G + +L + G ++P +F+P Sbjct: 599 YSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIP 658 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKR 599 + + L + VL + +VNL + + ++++ K Sbjct: 659 IAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKE 718 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 PQ + LE+TE A + + ++ + LH+ G R++IDDFGTGY++ LK+ +A Sbjct: 719 EDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYK 778 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DI T+ D IV +I +AK L +AE VET +QQA L + G QGY Sbjct: 779 LKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGY 838 Query: 720 LIGRPQPLAD 729 +P P AD Sbjct: 839 HYSKPLPAAD 848 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 97/447 (21%), Positives = 174/447 (38%), Gaps = 17/447 (3%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAG 349 + + + + + + A D LT LPN + Sbjct: 1053 IKGETSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNI 1112 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + L +D + ++ G + +++ + L ++E + + +L G E ++L G Sbjct: 1113 VALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVA 1172 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + L + + + + L+ + Sbjct: 1173 KTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAK 1232 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 + ++ T+ VLL ++ A+ + +L L QP + G + +L Sbjct: 1233 SLGRN-NFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALL 1291 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPL 582 + G ++P +F+PL + + + V+ + LA +VNL Sbjct: 1292 RWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSAR 1351 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 L +I I + Q++ LE+TE N + S+ + +L G IAIDDF Sbjct: 1352 QLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDF 1410 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID FV+DI + DA I +I LA + L+VVAE VETQ Sbjct: 1411 GTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQ 1470 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L G +QG+L+ +P D Sbjct: 1471 AQLNFLGLQGCDEVQGFLLSKPLSAKD 1497 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 102/470 (21%), Positives = 191/470 (40%), Gaps = 24/470 (5%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 Y+ + + + R S+ + + + A DPLT LPN R Sbjct: 301 SKSGDIYAKNLTITAVRDGKGVVSNYVATFRDITTSKAASEKINNLAYFDPLTQLPNRRM 360 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + L +DN + ++ G + ++ + L ++E + Sbjct: 361 LLDSLRHVLTISARSNQHCALLFLDLDNFKTLNDTLGHDVGDLLLQQVATRLTDCVREGD 420 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL--------NSRQIHWNNTGLDMGYGAAWGR 443 + +L G E +++L + ++ N Sbjct: 421 IVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTI 480 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F GN+ ++ LL Q QS A + + + + +R A++ Sbjct: 481 FSGNETGIEELLKQADIAMYQSKAAGRN-TWHFFNKTMQESIIARADMERDLRKAIEDNQ 539 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L+ Q + + G + ++ + G ++P F+PL + L VL+S Sbjct: 540 FQLHYQAQVSSSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLDSACA 599 Query: 562 WLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 L + + +VN+ L Q++ ++ KR+ I+P + LE+TE N Sbjct: 600 QLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKLELTESMLVEN 659 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + + L K G ++DDFGTGY++ + LK+L + IKID FV+D++T+ D I Sbjct: 660 ISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAI 719 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VR+I ++ + +SV+AE VET +++ L G + QGYL +P P+ + Sbjct: 720 VRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINE 769 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 111/470 (23%), Positives = 191/470 (40%), Gaps = 25/470 (5%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + E L + + + + + + R + R A D LT LPN Sbjct: 759 RKNGEEIWLEMDILPIANSAGVFTHWVSVQRDITERKAAESRIQHLAFYDMLTNLPNRLL 818 Query: 340 LEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L EQ + L +DN + ++ +G + + + LL ++ + Sbjct: 819 LLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITD 878 Query: 392 KLYQLPGSELLLVLSG-----PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 + +L G E ++V+ + + + S+ + Sbjct: 879 TVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQPFRLSGYEHYSSCSIGVAL 938 Query: 444 F-DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F + Q T+ LL + ++ A + + TK+ + +R AL + Sbjct: 939 FCNEQQVTVDELLKRADLAMYEAKAAGRN-TFRFFDPAMQALITKRAAMEEDLRQALRRD 997 Query: 503 DLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 ++ LY QP + +G G + ++ G+++P F+ L + L VL + Sbjct: 998 EMRLYYQPQVDSQGSLLGAEALVRWEHPQQGLLSPAAFIELAEETGLILPIGEWVLRTAC 1057 Query: 561 KWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 L + G SVN+ L Q + R+ + K +PQ++ LE+TE Sbjct: 1058 MQLVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKETGANPQSLKLELTESTLVE 1117 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N E + + L G ++DDFGTGY++ LKRL +KID FV+D++ ++ DA Sbjct: 1118 NIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDAS 1177 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV++I L + VVAE VE+ +QQ L K G QGYL GRPQP Sbjct: 1178 IVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGRPQPAE 1227 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 94/466 (20%), Positives = 184/466 (39%), Gaps = 21/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + + ++ L S + + + + +R A D LT L N Sbjct: 766 RKDGSIFWESASISPLFDESGKIINFIGVKEDITQRKLNEKRLEYMATHDGLTGLANRTL 825 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + L +D + ++ G ++ ++++ + L ++ + Sbjct: 826 LYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTD 885 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +++L+ + + L + L + + + Sbjct: 886 TVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDN 945 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL ++ A L ++ K + + N++R AL++ + LY Sbjct: 946 VDGTILLRNADIAMYKAKAEG--CGLYFYSHEMNEHLIKTLEMENSLRQALEKNEFQLYY 1003 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP G + +L G++ P +F+PL + L + VL + Sbjct: 1004 QPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKI 1063 Query: 566 HPCDK-KGPRFSVNLMPLTLLQ-KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + +VN+ Q +N+ + +R + P + LE+TE +A ++ Sbjct: 1064 WETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNA 1123 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++ + G +++DDFGTGY++ L+ D +KID F+ DI ++ A I+ SI Sbjct: 1124 ERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSI 1183 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VAE VE Q AL+ G Y+QGYL RP P D Sbjct: 1184 IAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPED 1229 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 104/463 (22%), Positives = 186/463 (40%), Gaps = 19/463 (4%) Query: 284 GVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y ++++ + + + R A D LT L N +L Sbjct: 428 KNGEAYPKWLSISLVRDEDGQIRNHIGSFIDISELKATQERIRHLAHHDTLTNLANRFSL 487 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 + + + +D + ++ G + + + L ++E++ Sbjct: 488 HEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDI 547 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++ L G + H+ + + S L + G+ Sbjct: 548 VARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGS 607 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + LL + A+ E ++ TT+++ L + +R A+ + + LL+ Q Sbjct: 608 EIGDLLKNADVAMYHAKANGRG-NYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQ 666 Query: 510 PIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + G + ++ G+++P F+P+ + + A VLE + L Sbjct: 667 PQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVW 726 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R S+NL L K + RI L +S + LE+TE + ++ + S+ Sbjct: 727 QNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESIS 786 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ L G ++IDDFGTGY++ LK L +KID FVKDI ++ DA I Sbjct: 787 VMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVL 846 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA L VVAE VET+ Q L +G + +QGYLI +P P Sbjct: 847 LAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPAD 889 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 106/506 (20%), Positives = 204/506 (40%), Gaps = 16/506 (3%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + A L+ + + + + + + + NY L+ + + + + Sbjct: 67 YSAEELLEQMGPLDLILPEQHAFVIEQMQLRAAGVLGHNYELTGLRKDGSTLPIMVLGSP 126 Query: 298 -LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EA 348 +I + V + +R A D LT LPN R L + EQ ++ Sbjct: 127 SVIGGLPASVGTVLDISAQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKS 186 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D+ + ++ G + + + R L +++ + L +L G E + + G Sbjct: 187 EIAVIFLDLDHFKRVNDSLGHSVGDELLCEVARRLDSVVRRIDTLARLGGDEFIFAMPGF 246 Query: 409 ETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 T ++ ++ SR L + + + L+ LL ++ Sbjct: 247 HTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAK 306 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEIL 523 A ++ T ++L+ + +R AL Q + +L+ QP+ N E G + ++ Sbjct: 307 EMGRN-AFQFYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALI 365 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPL 582 L + G++ PD+F+ + + L VL + +VN+ P+ Sbjct: 366 RWLHPELGLIMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPV 425 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + + + LE+TE +A+ +M + LH+ G +++DDF Sbjct: 426 QFRQAGFVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDF 485 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR +KID FV D+ T+ D I +I + ++ ++V+AE VE Sbjct: 486 GTGYSSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKV 545 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 +Q ALL K+G QGY RP Sbjct: 546 EQLALLRKMGCDMAQGYYFSRPMSAD 571 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 121/566 (21%), Positives = 206/566 (36%), Gaps = 31/566 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFT-LSWLAALSVLLLLLCTPYENDFIAGYLVPV 246 R I + R E T S CT Y + I G V Sbjct: 461 RDITERKQVEAELRIAAVAFDSMEPMMITDASATILRVNSAFTECTGYTAEEIVGQTPRV 520 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETE-YSLAFILAVLI---SFS 302 G+ F W + + + E Y ++ ++ Sbjct: 521 LR------SGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTV 574 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCC 354 + + R A D LT LPN L Q EA + Sbjct: 575 SHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALLF 634 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----E 409 + +D+ + ++ G ++ + R L + E++ + ++ G E ++VL E Sbjct: 635 IDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKNRQE 694 Query: 410 TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + + + + + H F G+Q ++ LL Q +S Sbjct: 695 AANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMYKSK 754 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK-EGEGYDEILAR 525 A+ + + ++ L +R A++ LL+ Q G + ++ Sbjct: 755 ERGRN-AVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGTRVTGAEALVRW 813 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLT 583 GI+ P +F+PL + L VLE+ LA D +VN+ Sbjct: 814 QHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQ 873 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + + ++ + R P + LE+TE N + + + L G A+DDFG Sbjct: 874 FRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFG 933 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 GY++ LKRL D +KID FV+D++ ++ DA+I R+I LA++ L V+AE VET+ Sbjct: 934 IGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEA 993 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ L G QGY RP P+ D Sbjct: 994 QRDFLAAAGCYAYQGYYFCRPLPIED 1019 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 100/461 (21%), Positives = 195/461 (42%), Gaps = 21/461 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ- 346 E+ + V + + S+ A DPLT LPN R L+ +Q Sbjct: 543 EHLTITAVKDAGGNVVNYVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQA 602 Query: 347 -------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +DN + ++ G + + + L ++E + + ++ G Sbjct: 603 LASCGRSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGD 662 Query: 400 ELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L + + + + + + + D F+ N ++ Sbjct: 663 EFVVMLEDLSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSI 722 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 LL Q Q+ + + + + ++ L +R A+++ LY Q Sbjct: 723 DELLKQADIAMYQAKKAGRN-TMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQ 781 Query: 512 RN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G + +L + + G+M P +F+P+ + L VLE+ L D Sbjct: 782 VDETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKD 841 Query: 570 --KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + S+N+ Q + ++ Y I P + LE+TE N ++++ + Sbjct: 842 PLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRM 901 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L K G ++DDFGTGY++ + LKRL D +KID F+++I +++ D IV +I +A Sbjct: 902 SALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMA 961 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + V+AE VET++Q+ LL + G + QGYL +P P+ Sbjct: 962 QSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVE 1002 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 107/501 (21%), Positives = 194/501 (38%), Gaps = 25/501 (4%) Query: 252 TLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLY 307 L G+ F + W ++TL + Y + + + + Sbjct: 622 ILSAGRNEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYVA 681 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + + + A D LT LPN R L + L +D Sbjct: 682 IFSDITQRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDR 741 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----L 414 + ++ G + + + ++E + + +L G E ++++ +T + Sbjct: 742 FKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRAEETSKHI 801 Query: 415 QHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + S + G +E+ LL Q+ Sbjct: 802 AAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRN 861 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYD 529 A+ + ++ +V L N +R AL L LY Q + G + ++ + Sbjct: 862 -AVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAIGAEALVRWIHPI 920 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQK 587 G+++P F+P+ + +L VL++ LA +VN+ Q Sbjct: 921 RGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQV 980 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 I L + Y I PQ + LE+TE ++ + + L G R+++DDFGTGY+ Sbjct: 981 GFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYS 1040 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK L D +KID FV++I T+ DA++V++I +A+ L+V+AE VET+ Q A Sbjct: 1041 SLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAF 1100 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L + G QGY G+P P+ Sbjct: 1101 LKQNGCMCYQGYYFGKPAPIE 1121 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 103/479 (21%), Positives = 187/479 (39%), Gaps = 17/479 (3%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 W+ + + Q + S S + + + + + A Sbjct: 301 WSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDESNSCNYVGVFTDISQIKQSEAQLAQLA 360 Query: 327 LTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 DPLT LPN +A+E+A + +D + ++ G + + Sbjct: 361 HYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIK 420 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW-NNTGLD 434 + + ++E + L +L G E LLVL G + L + + + Sbjct: 421 LAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIF 480 Query: 435 MGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNT 494 + F + L+ Q+ E +S +++++ N Sbjct: 481 INASIGISLFPEDASNATELIQHSDMAMYQAKKEGRN-TYRYHTEALSVAANERLIMENR 539 Query: 495 IRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R AL +L+L+ QP+ + G + ++ ++ P KF+P+ + L Sbjct: 540 LRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIVPL 599 Query: 552 DLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 VL + K +VNL +N+ G + R+ + + + LE Sbjct: 600 GEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELE 659 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 +TE + E S+ + +L G +AIDDFGTGY++ LKR D +KID FV+D+ Sbjct: 660 LTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDL 719 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + D I +I +A+ L V+AE +E+++Q A L + Y QGYL RP P + Sbjct: 720 ADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIE 778 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 98/449 (21%), Positives = 184/449 (40%), Gaps = 21/449 (4%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + + A D LT LPN R L + Sbjct: 462 GVVTHYVGSYTDLTERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGA 521 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--- 408 + +D + ++ G + ++ + L ++E + + ++ G E +++L Sbjct: 522 LLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIE 581 Query: 409 --ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 E + + + + + F N ++ L Q Sbjct: 582 SVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMY 641 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDE 521 Q+ L ++ + + + L +R AL L L+ Q + + G + Sbjct: 642 QAKKSGRNK-LRFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSAHQTIGAEV 700 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNL 579 +L + GI++P +F+P+ + L L VLE+ L ++N+ Sbjct: 701 LLRWIHPVNGIISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINV 760 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 Q A + + +R+ I+P + LE+TE +N + ++ + L +FG + ++ Sbjct: 761 SARQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSL 820 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ + LKRL +KID FV+D+ T D IVR+I +A + +L+V+AE V Sbjct: 821 DDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGV 880 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ET+ Q+ +L K + QGYL G+P P+ Sbjct: 881 ETEIQRQILLKNQCSHFQGYLFGKPMPIE 909 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 99/560 (17%), Positives = 200/560 (35%), Gaps = 28/560 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLL-----LLLCTPYENDFIAGYLVPVFF--- 248 ++ E+R T+ + + + L GY Sbjct: 111 ITARKKTEKALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMK 170 Query: 249 IIFTLGVGKLRYPF-LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLY 307 I + + L + + +++ + + + LY Sbjct: 171 ITDVTHPDDIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLY 230 Query: 308 ---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 +++ R + R A D LT L N +++ + L Sbjct: 231 TVPVIQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLD 290 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + +R L ++EN+ + +L G E +++LS + + L Sbjct: 291 LDRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPR 350 Query: 417 MVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + + + S + + + + LL + Sbjct: 351 VADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGD-T 409 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDG 530 ++ + ++ + +R AL+Q + + QP + + G + +L Sbjct: 410 FRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQL 469 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNI 589 G++ P +F+ L + NL V+ + + + R +N+ +Q + Sbjct: 470 GVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDF 529 Query: 590 AGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANY 649 + RL +P+ + EITE + ++++ +E L K G +AIDDFGTGY++ Sbjct: 530 VDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSL 589 Query: 650 ERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLH 709 LK L + +KID F+ D+ N D IV + +AK L V AE VET+ Q + Sbjct: 590 SCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQ 649 Query: 710 KLGVQYLQGYLIGRPQPLAD 729 K +QG+ RP ++ Sbjct: 650 KRECDEVQGFYFSRPLSPSE 669 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 113/504 (22%), Positives = 206/504 (40%), Gaps = 27/504 (5%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF--LQGVETEYSLAFILAVLISFSVC---L 305 L G+ + F W L ++ + Y + + S Sbjct: 218 HLLASGRHDHTFYREMWD-DILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYY 276 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRI 357 + + + + + H A DPLT LPN R L + +Q + L + Sbjct: 277 VGIFSDVTKRKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDL 336 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEG 412 DN + ++ G + + + + L ++ + + +L G E ++VL E Sbjct: 337 DNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAAT 396 Query: 413 RLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + S+ N F G+Q++L+ +L Q+ Sbjct: 397 QADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAG 456 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLK 527 A+ + ++ + L +R +++ L LY Q + G + +L Sbjct: 457 RN-AIRFYDPVMQASIEARAELEEELRQVVERNQLRLYYQVQMDSSNRPLGAEVLLRWQH 515 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLL 585 + G+++P +F+P+ + L VL++ L D +VN+ Sbjct: 516 PERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQFR 575 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 + ++ R + P + LE+TE N E ++ + +L G ++DDFGTG Sbjct: 576 SMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTG 635 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ + LKRL D IKID FV+DI +++ DA IV++I +++ L+V+AE VET+ Q+ Sbjct: 636 YSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQR 695 Query: 706 ALLHKLGVQYLQGYLIGRPQPLAD 729 L G QGYL GRP PLA+ Sbjct: 696 EFLDLRGCHAFQGYLFGRPAPLAE 719 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 188/442 (42%), Gaps = 16/442 (3%) Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCC 354 + L+ M +R A D LT LPN L+ + Sbjct: 128 LYLIGMFVDITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVALLF 187 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 + +DN + ++ G + ++++ + +++ + + + G E +++LS E+ Sbjct: 188 IDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLESAFDA 247 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + L + F + E + LL + + Sbjct: 248 EAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKKNGRN 307 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKY 528 + + ++ Q ++ + +R AL + +LLL+ QPI N + +G++ +L Sbjct: 308 NC-EFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRWQHP 366 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQK 587 G++ P KF+ L + + ++ + PR ++NL + QK Sbjct: 367 GDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQFRQK 426 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + I+R+ ++ + LEITE + + E ++ + QL + G I+IDDFGTGY+ Sbjct: 427 TLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFGTGYS 486 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 N LKR Q + +KID FV+DI + D I+ +I +A A L V+AE VE +QQ A Sbjct: 487 NLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQLAY 546 Query: 708 LHKLGVQYLQGYLIGRPQPLAD 729 L G QG+ +P P + Sbjct: 547 LALHGCTRFQGFYFSKPLPAIE 568 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 110/510 (21%), Positives = 200/510 (39%), Gaps = 34/510 (6%) Query: 252 TLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVLISF---SVCLLY 307 L G+ + W V + Y + ++ + + Sbjct: 399 MLTSGREDAALDDAMWETVQRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVA 458 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + + + + H A DPLT LPN R L + + +DN Sbjct: 459 THIDITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDN 518 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE----GRLQ 415 + ++ G + + + + L +++ + + +L G E ++++ + +++ Sbjct: 519 FKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVE 578 Query: 416 HMVNILNSR---QIHW---------NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAE 463 + + + N F + + LL Q Sbjct: 579 AVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMY 638 Query: 464 QSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYD 520 Q+ A+ + + T +V L +R A++ G LY QP + G + Sbjct: 639 QAKDSGRN-AIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAE 697 Query: 521 EILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVN 578 +L G++ P +F+PL + L VLE+ LAT +VN Sbjct: 698 ALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVN 757 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + + Q + +++ + +PQ + LE+TE SN E + + L G + Sbjct: 758 VSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFS 817 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LKRL D +KID FV +++T+ DA I + I LA++ L+V+AE Sbjct: 818 LDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEG 877 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VET++Q+ L + G QGYL +P PLA Sbjct: 878 VETEEQRNFLAESGCHAYQGYLFSKPLPLA 907 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 109/518 (21%), Positives = 210/518 (40%), Gaps = 32/518 (6%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + ++ + G V + + + R + W + ++ ++ Sbjct: 532 WTSEEVMGREVEMLYDNVAVFDEANRALLSSGEWRGELAQR--------RRDQSMLNVEA 583 Query: 294 ILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------ 344 ++ + + + + + AL D LT LPN R L Sbjct: 584 HWTLVRNDDGEPQAIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAV 643 Query: 345 --EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + + +DN + ++ G M +R + L ++E++ + +L G E + Sbjct: 644 SARNQRMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFV 703 Query: 403 LVL------SGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 ++L E ++ + + S + + + + F+ +T Sbjct: 704 VILMGDFGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNE 763 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL + Q+ A A+ + + + +L + + + ++ + +L+ Q + Sbjct: 764 LLKRADLAMYQAKASGRN-AMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVD 822 Query: 514 KE-GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDK 570 G + ++ G++ P +F+P + L VLE+ LA+ + Sbjct: 823 SRGIIGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPET 882 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 SVN+ L Q + ++I + R +PQ + LE+TE + + ++ + L Sbjct: 883 VQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTL 942 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G A+DDFG GY++ LKRL D +KID FV+D++T+ DA IVR+I LAK+ Sbjct: 943 KARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSM 1002 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+V+AE VET Q+ L G QGYL RP PL Sbjct: 1003 GLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLE 1040 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 93/464 (20%), Positives = 176/464 (37%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T Y ++V+ + + + A DPLT L N + Sbjct: 738 RKDGTLYPKWMAVSVVRDADGVLTHYVASFTDITERKLAEAQIKHLAYHDPLTGLSNRFS 797 Query: 340 LEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ A ++ + L +D + ++ G + + + R L +++++ Sbjct: 798 LQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSD 857 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++VL+ + + L + L + + Sbjct: 858 IVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDG 917 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ + + ++ K++ + +R A++ G L+ Sbjct: 918 DDADALMKNADTAMYHAKSQGRDNV-QFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHY 976 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + ++ G+++P +F+P+ + L VL + L Sbjct: 977 QPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRL 1036 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL L + + R + + + LEITE A + +S+ Sbjct: 1037 WRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASI 1096 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ L G ++IDDFGTGY++ LK L D +K+D FV +I N D I + Sbjct: 1097 AQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATI 1156 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + L VVAE +ET+ Q+ LL ++QGYL P P Sbjct: 1157 ALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAE 1200 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 99/466 (21%), Positives = 187/466 (40%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + Y ++ + + + + + + R A D LT LPN Sbjct: 646 RRSGDIYPQWLTISTVFNDRNEPCNYVGVFTDITQIKQSEARLAHLAHYDALTGLPNRLL 705 Query: 338 ------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 A+E+ + L +D + ++ G + + + L ++E + Sbjct: 706 VQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREED 765 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGN 447 L +L G E L+VL + + L + + + + F + Sbjct: 766 TLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTD 825 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 ++ L+ + + +S ++++L +R AL G+ +L+ Sbjct: 826 ANSVTELIQHADMAMYLAKQEGRN-TYRYHTDALSIAANERLVLETQLRQALSAGEFVLH 884 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP+ + + G + ++ D +++P KF+P+ + L VL + Sbjct: 885 YQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGR 944 Query: 565 TH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 D +VNL +N+ I ++ + + + LE+TE +AE S Sbjct: 945 AWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQS 1004 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++ L G R++IDDFGTGY++ LKR D +KID FV + + D I +I Sbjct: 1005 IEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATI 1064 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A+ L V+AE VE++QQ +L++ G Y QGYL RP P + Sbjct: 1065 IAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQE 1110 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 116/568 (20%), Positives = 212/568 (37%), Gaps = 31/568 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAA----LSVLLLLLCTPYENDFIAGYL 243 R + +R + G + A+ +S + D + + Sbjct: 259 RSAEQLREQLLFIQRIASRIPGFIYEYRMHNDGASSVPYISDAVREFMGVNPEDVMRDHG 318 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV 303 + + ++ + + ++ L + Sbjct: 319 LLMRSVVPDDAA----HVRRSAVASLRNLAPWQCEYRVSMPDGSVRWHITNAIPHREPDG 374 Query: 304 CLL--YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 ++ + + A D LT LPN R L ++ + + Sbjct: 375 SVVSHGFTMDITDRKRAEQEIERLAFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALL 434 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP----- 408 + +DN + ++ G M H + + LL ++E + + + G E +++L Sbjct: 435 FIDLDNFKDLNDTLGHDMGDHLLSQVAARLLACVRETDTVARFGGDEFVVMLETLRPELT 494 Query: 409 ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E + + + L + + F + ++ LL + Q+ Sbjct: 495 EAASQAEIVAEKLLASLNQPFALGGQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQA 554 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEIL 523 + + + L +R L +G+L +Y QP+ + G + ++ Sbjct: 555 KGAGRNTQ-RFFDPDMQAAVNARSNLEADLRQGLARGELCVYYQPVVDHRARLLGVEALV 613 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMP 581 G+++P F+PL Q L QVL++ L + SVN+ Sbjct: 614 RWRHPVRGMISPADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSA 673 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q +++ + P+ + LE+TE + E ++ +EQL + G A+DD Sbjct: 674 RQFRQPGFVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDD 733 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKRL D +KID FV+D++T+ DA IVR+I LA++ L VVAE VET Sbjct: 734 FGTGYSSLSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVET 793 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q A L G + QGYL GRP P+ D Sbjct: 794 TGQLAFLRLHGCEGFQGYLFGRPGPVED 821 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 95/465 (20%), Positives = 183/465 (39%), Gaps = 20/465 (4%) Query: 284 GVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 Y + ++ + + + + + A D LT LPN Sbjct: 225 KNGELYWASASISPITNGNEQITHFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLF 284 Query: 341 E--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ-ENE 391 QA + L +D + ++ G + +++ L + + + Sbjct: 285 NELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRD 344 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +++L + + + + + L + F + Sbjct: 345 TVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDG 404 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ ++ + Q +++ + N++R AL + + LY Sbjct: 405 RDTETLIKNADMAMYRAKEQGRSR-YHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYY 463 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + + ++ + G++ P++F+PL L VL + T Sbjct: 464 QPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKT 523 Query: 566 HPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + R +VN P Q + + ++ ++P + LE+TE N E ++ Sbjct: 524 WQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTV 583 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G I+IDDFGTGY++ +K+L +KID FV DI TN DA I ++ Sbjct: 584 QTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVI 643 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A++ L+V+AE VET +Q LL L +QGYL +P P+A+ Sbjct: 644 TMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAE 688 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 113/466 (24%), Positives = 193/466 (41%), Gaps = 24/466 (5%) Query: 286 ETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 + +L+ + V L VR + A DPLT LPN R L Sbjct: 660 GQSFPADVLLSSMKLDGRVVLQATVRDITERKKSESEIVRLAFYDPLTGLPNRRLLMDRL 719 Query: 345 EQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 + + + +DN + ++ G + + + + L ++E + + +L Sbjct: 720 QHALTSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARL 779 Query: 397 PGSELLLVLSGPET---------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 G E +++L + + ++ LN F + Sbjct: 780 GGDEFVVLLDNLSHGHDNAGAHTKRVAEKILQALN-LSYMLQGYEYHSSPSIGVALFCAD 838 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + LL + QS A + +E + L + + AL+Q L+LY Sbjct: 839 ASSPDELLKRADSAMYQSKAAGRN-TVRFYDERTQALLLARAELEHALHHALEQQQLMLY 897 Query: 508 AQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q N + G + +L G+++P +F+PL + + VLE L Sbjct: 898 YQVQVNADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKR 957 Query: 566 HPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 D +VN+ + + A ++ L ISP + LEITE + E+ Sbjct: 958 WASDVFKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENI 1017 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++QL K G ++DDFGTGY++ +KRL D +KID FV+DI + D IVR+I Sbjct: 1018 IATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTI 1077 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A++ L+++AE +ET+QQ+ LL G QGYL +P PL+D Sbjct: 1078 IAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSD 1123 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 103/530 (19%), Positives = 203/530 (38%), Gaps = 21/530 (3%) Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFF-IIFTLGVGKLRYPFLNLTWAVSTLCLL 275 LS + T ++ + G + ++ + + Sbjct: 222 LSGNITFLNSVAEKLTGWQQNEALGRPIADILKVVDEITREPRGSTVERPNQ-LHRSTKA 280 Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLT 332 N ++ +E + A ++ + ++ + + + A D LT Sbjct: 281 PSNSILVRRDGSELPIDESRAPILDRQGQIAGTVTVLHDVSVTRAMELKMAHLAQHDFLT 340 Query: 333 LLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN R L+ Q + + ID + ++ G M ++S+ L Sbjct: 341 DLPNRRVLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLT 400 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAW 441 ++ ++ + + G E +++L+ T + + S L + Sbjct: 401 TCVRASDTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGI 460 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + + L+ Q+ ++ + ++ L +++R AL++ Sbjct: 461 STCPNDADDAETLIKHADIAMYQAKEKGRN-NYQFFRADMNERVLQRQSLESSLRLALER 519 Query: 502 GDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + LL+ QP N G + ++ + G++ P F+ + L VL+ Sbjct: 520 QEFLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQE 579 Query: 559 LLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 + + +VN+ + +K+ +I + + P+ + LE+TE Sbjct: 580 ACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLM 639 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 AE ++ + L G ++AIDDFGTGY++ L RL D +KID FV D+ T T +A Sbjct: 640 KEAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNA 699 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 IV +I + K+ +L+V+AE VETQ+Q ALL QGY RP + Sbjct: 700 AIVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSV 749 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 100/487 (20%), Positives = 197/487 (40%), Gaps = 26/487 (5%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRW 322 +W+ + + + E+ + + + M ++ + R Sbjct: 478 ETGSWSGEIINRRKNGEIYP-----EHLTITAVKDADGQTTNYVGMFTDISVAKAASERI 532 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A DPLT LPN R + L +D+ + ++ G Sbjct: 533 ENLAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDM 592 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLS-----GPETEGRLQHMVNILN---SRQI 426 ++ + L ++E + + +L G E +L++ E +++ + + + ++ Sbjct: 593 LLKQVALRLSNCVREGDSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPY 652 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + F+G+QE+ + LL Q+ L + ++ Sbjct: 653 QLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMYQAKKAGRN-TLRFFDPLMQETIN 711 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 +V L ++ A++Q LY Q N + G + ++ + GI++P +F+P+ + Sbjct: 712 MRVDLERELKKAIEQKQFELYYQVQMNSAGQPSGAEALIRWRHPERGIISPIQFIPVAEE 771 Query: 545 FNLSARFDLQVLESLLKWLATHP--CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L + VL L K ++N+ LQ + A ++ + +HI Sbjct: 772 TGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHI 831 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + LE+TE N E ++ + L + G + ++DDFGTGY++ + LK L +KI Sbjct: 832 DNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKI 891 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+D+ T+ + IV +I +A + L+V+AE VET +Q LL+ G QGY Sbjct: 892 DQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFS 951 Query: 723 RPQPLAD 729 P + + Sbjct: 952 EPLSINE 958 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 98/488 (20%), Positives = 177/488 (36%), Gaps = 19/488 (3%) Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSE 316 L AV LA + + + Sbjct: 586 PAVERLREAVREGGDARVTLRTYHKDGQLLWNEISLASIRDAQGEVSHFIAIFNDVTERV 645 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 QA D LT L N L + L +D + ++ G Sbjct: 646 RYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLG 705 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQ 425 ++ R L ++ + + +L G E ++V+S E + + + Sbjct: 706 HAAGDALLQETARRLSASVRRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEP 765 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + N + + + E LL ++ ++ + Sbjct: 766 MLLNGREIVATGSIGVSLYPRDGEAAATLLKHADVAMYRAKELGRNR-FQFYAPEMNERI 824 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 +++ L N++R AL+ +L L+ QP + G + ++ G+++P F+PL Sbjct: 825 LERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLA 884 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L V++ + L +VN+ + + + R + Sbjct: 885 EETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHR 944 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P + +E+TE E +++ + +L G RI++DDFGTGY + LKR D IK Sbjct: 945 LPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIK 1004 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV D+ T+ DA I I LA + + +V+AE VE + Q L + G +QG+L Sbjct: 1005 IDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLF 1064 Query: 722 GRPQPLAD 729 RP P A+ Sbjct: 1065 SRPLPAAE 1072 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 106/514 (20%), Positives = 202/514 (39%), Gaps = 29/514 (5%) Query: 243 LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFS 302 P+ + L G ++ + L +Y G T ++ + + Sbjct: 184 GNPILDPVHPLDRGFVQGSIDEAIGKRAPLS-FDYRITLGGGERTLHAELVTVLDEQGEA 242 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGKSFCC 354 VCL ++ + + L A D LT LPN R Q EQ + Sbjct: 243 VCLTGTIQDITERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDRMLAVLF 302 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ------------LPGSELL 402 L +D + ++ G + ++ + LL ++ + L + L G E Sbjct: 303 LDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRLGGDEFT 362 Query: 403 LVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++LS E + + + S + + + + T L+ Sbjct: 363 IMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASDLIRNAD 422 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEG 516 Q+ +E ++ + ++++L + + AL + + ++Y QP + Sbjct: 423 GAMYQAKEQGRN-GYQIYDESMNAKALERIILESQLHKALKEEEFIVYYQPQVSNQSGRV 481 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRF 575 G + ++ + G++ P +FLPL + L + D V+ + Sbjct: 482 VGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGFPPVTL 541 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 ++N+ ++ + + + K + P + LE+TE ++ E ++ ++ L G Sbjct: 542 AINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQALKGMGV 601 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 R+AIDDFGTG+++ LKR D++KID F+ DI T+ DA I + ++A L V+ Sbjct: 602 RLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMAHTMKLKVI 661 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 AE VET+ Q L K G QGYL +P P + Sbjct: 662 AEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTE 695 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 96/468 (20%), Positives = 181/468 (38%), Gaps = 17/468 (3%) Query: 278 NQNFLQGVETEYSLAFILAV-LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 + + + + L + + VR + + Q+ D LT L N Sbjct: 285 ETRHQRKDGRIFPVEVSASQCLFNNEENHVAFVRDITIRKKYEKELEHQSNHDALTGLAN 344 Query: 337 FRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 L+ +Q + + L +D + ++ G + ++ L + Sbjct: 345 RVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACIS 404 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFD 445 + L +L G E +V++ + M + + N L + + Sbjct: 405 PGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYP 464 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 + E + LL Q+ E + + K + L +R AL G + Sbjct: 465 RDGEQSEDLLRHADAAMYQAKKQGGN-GFQFCSEEMDTRAHKALELEGDLRQALQLGSFV 523 Query: 506 LYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ QP + + +G + ++ D G+++PD F+PL + L VL + Sbjct: 524 LHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQ 583 Query: 563 LATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 + +VNL LQ + I + + I P + LE+TE + + Sbjct: 584 FKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPD 643 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + +L + GF +++DDFGTGY++ L+R D +KID F+ D+ ++ A + Sbjct: 644 RIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVAN 703 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 S+ +A + + +AE VET++Q A L +QGYL +P P D Sbjct: 704 SVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPAND 751 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 105/565 (18%), Positives = 215/565 (38%), Gaps = 31/565 (5%) Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFIAGYL-V 244 S ++ E++ ++ + + + L +P + Sbjct: 138 SIRSDITARKQMEDELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPD 197 Query: 245 PVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL------ 298 +F V R F + + + + + Sbjct: 198 EEIHNLFEWIVEDDRDIFAYAIQ--HAFSTRKEYMVECRINTQRNDVIWTESKINPIMDE 255 Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGK 350 LL + R + H A D LT LPN R + QA ++ Sbjct: 256 EGNVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSL 315 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ +G + + + L ++ + + +L G E ++ + Sbjct: 316 AVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLD 375 Query: 411 EGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + R + ++ + + + + LL + + Sbjct: 376 RNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKS 435 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILA 524 D + + ++ +++L+ N +R A++Q +Y QP + G + ++ Sbjct: 436 RGKN-GYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVR 494 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 + + GI+ P++F+P+ + + +L+ K + SVNL + Sbjct: 495 WVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQI 554 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 QK++ I + + +SP + LEITE E + ++Q+ G +I+IDDFGT Sbjct: 555 YQKDLVEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGT 613 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY+++ +K L D IKID F++DI N IV++I +A++ +++V+AE +E Q Sbjct: 614 GYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQ 673 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 A L + G + QGYL +P P D Sbjct: 674 VAALKENGCDHGQGYLFSKPLPTDD 698 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 113/573 (19%), Positives = 209/573 (36%), Gaps = 32/573 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVF 247 R + P + + + + + T+ L + + E D + P F Sbjct: 258 RCVRGPDNEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAF 317 Query: 248 FIIFTLGVGKL-RYP-------------FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 + L + P + V L + YS Sbjct: 318 EAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEM 377 Query: 294 ILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK 350 + + + + + + + QA D LT LPN + EQ + Sbjct: 378 TVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQ 437 Query: 351 S--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + L +D + ++ YG ++ R L ++ ++ + +L G E + Sbjct: 438 AQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFI 497 Query: 403 LVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 ++LS E + ++ + S T + F + ET LL Sbjct: 498 VILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNAD 557 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGE 517 + ++ ++ + + + +R AL + + L+ QP + Sbjct: 558 VAMYHAK-QGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVRADLTLI 616 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFS 576 G + ++ + G++ P F+PL + L L + + + P S Sbjct: 617 GAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVS 676 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VN+ P + + + ++ + P+A+ LEITE + E ++ + L G Sbjct: 677 VNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVT 736 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 ++IDDFGTGY++ LK D +KID FV+D++ + DA IV +I LA+ SVVA Sbjct: 737 LSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVA 796 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VE +Q L Q QG+L RP P A+ Sbjct: 797 EGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAE 829 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 112/517 (21%), Positives = 209/517 (40%), Gaps = 29/517 (5%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 Y D + G+ F + + + + A+++ + T Sbjct: 622 YVPDELLGHTPMEFMPV-----EDIPHVREIVNRAIASNTSFKLQHRDITKSGTLLWEEV 676 Query: 294 ILAVLISFSVCLLYM---VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ---- 346 L+ + + A DPLT LPN R L + Sbjct: 677 NGVPFFDEHGELMGLRGTGMNITDRKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHALAS 736 Query: 347 ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 + + +DN + ++ G + ++ + L ++E + + +L G E + Sbjct: 737 STRSGREGALLFIDLDNFKTLNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFV 796 Query: 403 LVLSGP-----ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 ++L E + + + + ++ F ++++ L Sbjct: 797 VMLEELSEQTLEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEEL 856 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 L Q Q+ L + + + LL + AL+ LY Q Sbjct: 857 LKQADIAMYQAKKAGRN-TLRFFDPQMQETVIARALLERELSKALENDQFQLYYQIQMTD 915 Query: 514 -KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP--CDK 570 E G + ++ + + G++ P+ F+PL + L L VL++ + Sbjct: 916 LNEPFGAEALIRWIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNAST 975 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 + +VN+ + Q + +I + +R+ I+P+ + LEITE ++ E ++ + L Sbjct: 976 RELVLAVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNAL 1035 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 K G + A+DDFGTGY++ + LKRL D +KID FV+DI T++ D IV +I +A + Sbjct: 1036 KKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSL 1095 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 +L V+AE VET+QQ+ LL + G QGYL G+P P+ Sbjct: 1096 NLDVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPI 1132 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 123/666 (18%), Positives = 232/666 (34%), Gaps = 29/666 (4%) Query: 88 VMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ----RLFWLGLVTPIGIKCSMYLV 143 ++L VL + +T + R WL + ++ ++ Sbjct: 62 IILDLVLVSVLIHTSGGAASWFWPAYLFVTIEASFLIEDRREVWLVGGLGGLLYGAVLVL 121 Query: 144 GSFFDFPLKISTFFGDADAIFTVVDLLS-LFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 P F G + LL+ L+ ++L M M V + Sbjct: 122 EHLNIVPYVRMPFVGSELHHDHLYLLLTWLWVSLLNAAMAAIASYFMTVIRRETDAVREG 181 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY---LVPVFFIIFTLGVGKLR 259 + + + + + LL + + VP F I+ + Sbjct: 182 EERLATFLDTANDLIHSVTPDGRLLYVNEAWQRTLGYSAEEADAVPFFDILHPDSREQCC 241 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISF--SVCLLYMVRIYHRSEW 317 + + L F + L+ S + + R + Sbjct: 242 AELQRVVSGDA---LSPMEAVFTAKDGRSVIVEGSLSCAHGGDESSVIWSICRDITERKH 298 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQAPEQEA--------GKSFCCLRIDNLEFMSRHYGL 369 + + A D LT LPN +Q + L +D + ++ G Sbjct: 299 AEEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLDLDRFKIINDTLGH 358 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQI 426 + H ++ + + ++E + + ++ G E ++L +T ++ M + + Sbjct: 359 PVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAPF 418 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + L + F + + L L+ + + Sbjct: 419 NIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRNNV-QFYSPQMDANAD 477 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 K++LL ++R ALD + +Y QP + K + ++ G+++P +F+PL Sbjct: 478 KRLLLETSLRKALDNREFRVYYQPKVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAE 537 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L VL + R +VNL QKN+ I + + Sbjct: 538 ETGLIIPIGEWVLRAACFQNCEWVRQGIPPMRVAVNLSGYQFQQKNLLETIRGILDETGL 597 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + + LEITE N + ++ + QL G I+IDDFG GY++ LKR + +KI Sbjct: 598 TADLLELEITESVIMQNPDFAVSVLNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLKI 657 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+D+ N+ DA I +I + + +L V+AE VET+ Q + L +QGYL Sbjct: 658 DKSFVRDVEINSADAAIATAIIAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLFS 717 Query: 723 RPQPLA 728 P P Sbjct: 718 TPMPPE 723 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 104/508 (20%), Positives = 198/508 (38%), Gaps = 17/508 (3%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 F G + I G++ + ++ A+S N + + S+ LA Sbjct: 180 FAPGSALGRACICRDGVPGEVCNGYTDICQAISRGTEGYTVLNLERENGAQQSVELFLAP 239 Query: 298 LISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ------EA 348 + + S + ++ +R QA D LT LPN L Sbjct: 240 VENESGDVTHFIGVLNDVTARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGR 299 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ YG + IR + + ++ + + +L G E +++L Sbjct: 300 LTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDL 359 Query: 409 ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + + L S + + L + + + LL ++ Sbjct: 360 ASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRA 419 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + +++ + + +R AL G+L + QP + G + + Sbjct: 420 KERGRN-NYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEAL 478 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 + + ++ P +F+ + + L QVL + + + +VNL Sbjct: 479 VRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSG 538 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 Q ++ ++ + + LEITE A ++A+ S+ + L + G +AIDD Sbjct: 539 HQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDD 598 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR D +KID F++ I + D IV++I +A++ LS++AE VET Sbjct: 599 FGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVET 658 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q+ L G + QG+L GR P D Sbjct: 659 PAQREFLVAQGCRSGQGFLFGRAMPAED 686 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 104/444 (23%), Positives = 171/444 (38%), Gaps = 16/444 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 + + R + R QA D LT LPN + Sbjct: 382 DKITNYVGISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFA 441 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D + ++ G + ++ + + LL +E++ L + G E +++L Sbjct: 442 ILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGA 501 Query: 412 GRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + + + + E +Q LL ++ Sbjct: 502 EDAAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDS 561 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 E +S +++ L +R AL + + +L+ QP N G + ++ Sbjct: 562 GKND-YQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRW 620 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTL 584 D G++ P F+PL + VL + PR SVNL Sbjct: 621 DLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQF 680 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + N+ + R+ K +SP + LEITE N E ++ ++ L + G +AIDDFGT Sbjct: 681 KKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGT 740 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKR +KID FV+ I +N D I SI L K +L VVAE VETQ+Q Sbjct: 741 GYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQ 800 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 +L QGYL +P Sbjct: 801 LTVLRNYQCDEAQGYLFSQPVDAD 824 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 97/465 (20%), Positives = 187/465 (40%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y L + + + + + +R + A D LT LPN Sbjct: 468 RKNGEIYPLWVTANAVRNSKEEITHFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSL 527 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + +D +F++ G + ++ + + ++ + Sbjct: 528 FLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAED 587 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +++ + + + S + + L + + + Sbjct: 588 TIARLGGDEFTVIIENFTDTSAISLITQKIISACEKPFNIKGNELFVSASIGVSLYPEDG 647 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL + Q+ ++ T+Q+ L N +R AL + + LY Sbjct: 648 HEASMLLQRADAAMYQAKKRGKSCC-QFFTTEINTAATEQLALKNLLRRALARKEFQLYY 706 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI N E + ++ + + G+++P+ F+PL + L VL++ Sbjct: 707 QPIINMESGAIVSVEALIRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKI 766 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + R ++NL L Q + + R+ + K+ + LE+TE + ESS+ Sbjct: 767 WNQSNPYPVRIAINLSARQLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMESSL 826 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L K G R+++DDFGTGY+ LKR D +KID FV+ I + DA I ++T Sbjct: 827 KTLNTLKKMGCRLSLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVT 886 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + +V+A+ VET++Q L+++ V QGY I P P + Sbjct: 887 TMAHSLKRAVIAKGVETREQLNFLNEIKVDEAQGYFISYPVPAEE 931 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 118/633 (18%), Positives = 239/633 (37%), Gaps = 29/633 (4%) Query: 124 RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLF 183 R F + + + ++G L+ FF + ++ + L + Sbjct: 297 RNFGINGLVMFPLISMGEILGQISIVNLENKLFFYSETQLQLAQSIVDTTASALSNQLYM 356 Query: 184 YYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYL 243 +I +++ + + ++ L S + + + Sbjct: 357 EKQEIIIEERTSEVRDKNKELERVVAELQQLSREKELILNSAGEGIFGLDLDRNITFCNP 416 Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVS----------TLCLLNYNQNFLQGVETEYSLAF 293 + + + + N + F + + + + + Sbjct: 417 AGALMLGYETDRELIGQSVEIIMSGCEAEDNMTVSPFLNANFNSYEVFFRKDHSNFPVEY 476 Query: 294 ILAVLISFSVCL--LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE---- 347 + +++ + + + + + L + A D LT LPN L Q Sbjct: 477 VTSLIKEGDKVVGEVITFKDITQRKQLEEKIKYHAYFDSLTDLPNRVLLIDRLTQGLKYA 536 Query: 348 ----AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + L +D + ++ G ++S+ + L + E+ + + G E + Sbjct: 537 KVNGEKLAVLYLDLDRFKLVNDSLGHSYGDLLLQSVAKRLSACVPEDATVSRQGGDEFTI 596 Query: 404 VLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 L + E + ++N +N S+ + + + + F N +T + L+ Sbjct: 597 YLPNIKCENDILKVINCINASFSQPFNLIDNEIYIKTSIGISLFPKNGDTTETLIKNADT 656 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGE 517 +S + E + +T + + L N + AL++ +L+++ QP N + + Sbjct: 657 AMYKSKET-PGTSYHFFSEGMDTRTFESIKLENDLYKALERDELIIFYQPQINYKTNKIK 715 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFS 576 G + +L + G++TPD+F+PL + L VL+ K L S Sbjct: 716 GVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEWVLKEACKQLKEWHNQGYPLISMS 775 Query: 577 VNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFR 636 VNL Q N+ I + +SP+ + LE+TE N E ++ + QL+ G Sbjct: 776 VNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLELTENLIVKNTEVTLKTMTQLNGLGVN 835 Query: 637 IAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVA 696 +AIDDFGTGY++ LK L +KID FV++++T+ A I +I LA+ L V+A Sbjct: 836 LAIDDFGTGYSSLGYLKNLPISTLKIDKSFVQEMLTD-DAAAITNTIITLAQNLKLEVIA 894 Query: 697 EFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L + +QGY +P + Sbjct: 895 EGVETKEQADYLLEQNCHLMQGYFFSKPMKAGE 927 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 109/604 (18%), Positives = 212/604 (35%), Gaps = 35/604 (5%) Query: 158 GDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFA-----QILWRRDIAPSLGKEK 212 + + ++ ++ +L+ R V + A + Sbjct: 338 PNTLNTRWIAFGVAATLLCVMLVILWNVQMRRQVRMRTEALHAEIARREQTEAYLKISSR 397 Query: 213 RAFTLSWLAAL-------SVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 A SW+ +L S +L + F+ ++ Sbjct: 398 MARVGSWVLSLPEKTLYWSEEVLDIHECPPEFAPTLDSALAFYP--EEWRSRIVQALEEC 455 Query: 266 TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQ 325 + + + + L + ++ + R Sbjct: 456 LQKGDSFDEELPILTCKDKLLWIRIIGQAVYDLHGNITRIEGAIQDISAQKVAESRIQHL 515 Query: 326 ALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIR 377 A D LT LPN + E + + +DN + ++ G + ++ Sbjct: 516 AFYDSLTSLPNRQLFIDRLEHTLAYSARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQ 575 Query: 378 SICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN---SRQIHWN 429 + + ++E++ + + G E +++L E + + + + + ++ Sbjct: 576 QVAMRIAGCLRESDTVARFGGDEFVVLLHELSGNHQEAAAQARLVSEKILISFAHPFQFS 635 Query: 430 NTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQV 489 FD T+ +L + QS A + + + + +V Sbjct: 636 GYEHHTSASIGVTLFDQQPTTVDEILKRADLAMYQSKAAGRNV-IRFFDPEMQALIADRV 694 Query: 490 LLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 + +R L + L QP + +G G + +L G++ P F+PL L Sbjct: 695 EMEEDLRNGLRNDEFFLCYQPQVDNQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGL 754 Query: 548 SARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQ 605 V+ + K L +VN+ L Q + +I+ + +P+ Sbjct: 755 IVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPK 814 Query: 606 AVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGV 665 + LE+TE +N E + + +L G +IDDFG GY++ LK L D +KID Sbjct: 815 RLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQS 874 Query: 666 FVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 FV+D++T+ DA+I R+I L K+ +L V+AE VET Q+ L G QGYL +P Sbjct: 875 FVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPV 934 Query: 726 PLAD 729 P + Sbjct: 935 PADE 938 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 128/688 (18%), Positives = 250/688 (36%), Gaps = 65/688 (9%) Query: 92 SQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLG---LVTPIGIKCSMYLVGSFFD 148 + A+ + +TS RL WLG + +GI ++ F Sbjct: 9 FWLVSLSVFIAVTAAYTSFSFASRITSTSGKIRLLWLGGGSVAMGVGIWSMHFIGMLAFR 68 Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQI---------- 198 P + D+ + ++L+ ++ + RM P Sbjct: 69 MPFPVH------------YDVRTTLLSLLMAIVVSGFALRMTSLPRIGPANLLMAGTLMG 116 Query: 199 ----------LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPY--ENDFIAGYLVPV 246 + ++ ++ + LS L A+S L +D + Sbjct: 117 LGIGAMHYTGMMAMEMPMAIRYDPFLVFLSILIAVSASTAALRIVSTLRSDVAVADMPKK 176 Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 F +G + + A + L + ++ LA + ++ L+ Sbjct: 177 FLSALIMGAAISGMHYTGM--AAARFPLRMSGTPLKNSSDAWLAVTIGLASFMILAIGLI 234 Query: 307 YMVRIYH----------RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS----- 351 + H + N + H AL D LT LPN LE +Q + Sbjct: 235 LSLVDSHLATRTAGLVGSLKAANEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDG 294 Query: 352 ---FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 L +D + ++ G ++ + R L + + + ++ G E ++V Sbjct: 295 AFSVFFLDVDRFKPINDSLGHSTGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQ 354 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 + G++ + + + + + L + F + T + LL + Sbjct: 355 KDPGKVHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYA 414 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEI 522 + + ++ ++ + N +R +++ + +LY QP E E + + Sbjct: 415 KSKGSGQ-IQFYSGELNDSAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEAL 473 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMP 581 + + GI+ P F+P + L +++ + R +VNL Sbjct: 474 VRWNHPEKGILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSA 533 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + +++ I+ + + P+ + LEITE + E +M + + + G +AIDD Sbjct: 534 LQFINQDLMKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDD 593 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY+++ LK+ D +KID F+ DI N DA IVR+I L +L V+AE VE+ Sbjct: 594 FGTGYSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVES 653 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q Q +L + QG+ RP P + Sbjct: 654 QAQLEMLKAMECDAYQGFFNSRPLPPGE 681 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 93/431 (21%), Positives = 180/431 (41%), Gaps = 16/431 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSR 365 + +R A D LT LPN L EQ + + + +D+ + ++ Sbjct: 440 EGKEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTIND 499 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN--- 422 G + ++++ L ++ + + + G E ++VL+ + + Sbjct: 500 SLGHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSF 559 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + H + L + F + + LL + + + ++ Sbjct: 560 ALPFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRN-NYQFFTDELN 618 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 ++ +L +R AL++ +LLLY QP+ + G + +L + ++TPDKF+ Sbjct: 619 KSAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFI 678 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 L + L V+ ++ + PR ++NL K++ I R+ Sbjct: 679 NLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILS 738 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + + LEITE N E + + +L G I+IDDFGTGY++ LK+ Sbjct: 739 ETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIH 798 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+VT+ D IV +I +A + + V+AE +E ++Q L + QG Sbjct: 799 TLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQG 858 Query: 719 YLIGRPQPLAD 729 Y +P +++ Sbjct: 859 YYFSKPVTVSE 869 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 94/470 (20%), Positives = 187/470 (39%), Gaps = 18/470 (3%) Query: 277 YNQNFLQGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 Q L+ + ++ AV+ + L + + + A D LT L Sbjct: 223 SEQCLLRRDGSRITVLSCHAVVRRPGEAPELYGLDIDISERKINEEQLEYLATHDELTGL 282 Query: 335 PNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 N EQ + L +D + ++ G + ++ + L + Sbjct: 283 ANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGHSFGDRLLSAVAQRLDRV 342 Query: 387 MQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 +++ + + +L G E +L+L+ + + + + + + M Sbjct: 343 VRDTDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIVMSASLGISL 402 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 + + L+ ++ + ++ + + + + + +R AL++G+ Sbjct: 403 YPKDSGDGSTLIRNADIAMYRAKQEGGGV-FSFYAPEMNQRAMETMEIESALRLALERGE 461 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LY QP + G + ++ L G++ P F+PL + L VL+ Sbjct: 462 FTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVLKEAC 521 Query: 561 KWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + + + +VNL ++ G + + + P + LE+TE ++ Sbjct: 522 RQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMAD 581 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + +E+L G R+++DDFGTGY+++ L + +KID F+K IVT+ A I Sbjct: 582 HAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATI 641 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 SI +A L +AE VET+ Q A L K G +QGYL+ RP P ++ Sbjct: 642 ATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASE 691 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 107/486 (22%), Positives = 201/486 (41%), Gaps = 25/486 (5%) Query: 263 LNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRW 322 +W + +LQ + +++ + + + + + + Sbjct: 422 TQGSWQGEIFNKRKNGEEYLQWTM----ITAVISDHEDEIINYVITLIDITQRKAAESKI 477 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT LPN + L + + L +D+ + ++ G Sbjct: 478 KQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGDK 537 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-GRLQHMVNIL-------NSRQI 426 + + + LL ++ + + ++ G E +++L +++ ++L S+ Sbjct: 538 FLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKPY 597 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + +N F G + + LL Q+ + + Sbjct: 598 YIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRN-THRFFNPEMQAKVL 656 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + + N IR AL + + LY QP + + G + ++ G ++P +F+P+ + Sbjct: 657 EHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHPKQGTISPIEFIPIAEE 716 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 L VL+ + LA ++N+ Q +++ +RY Sbjct: 717 TGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRA 776 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 +P + LE+TE + E ++ + QL K+G ++DDFGTGY++ LKRL D +KI Sbjct: 777 NPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKI 836 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D FV+D++TN+ DA I R+I LAK+ +L+V+AE VETQ+Q+ L G QGYL Sbjct: 837 DKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFS 896 Query: 723 RPQPLA 728 RP PL Sbjct: 897 RPVPLE 902 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 110/580 (18%), Positives = 217/580 (37%), Gaps = 35/580 (6%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA 240 + Y + R + + RDI+ E++ LS S + I Sbjct: 332 PVEYSVGRWREAGRNFFSVAARDISKRKQSEEKLRHLSQAVEQSPA---DVVITNAEGII 388 Query: 241 GYLVPVFFIIFTLGV-------------GKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVE 286 Y+ P F + G+ + W +S + Sbjct: 389 QYVNPRFSQVTGYASKEVIGKKPSILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDG 448 Query: 287 TEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF------ 337 + + I++ + S + + + R QA D LT LPN Sbjct: 449 SLFWQHAIISPIRDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDR 508 Query: 338 --RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +A+ QA + L +D+ + ++ G ++ L+ ++E + + + Sbjct: 509 LKQAIAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVAR 568 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQ 452 L G E +L+L + + + + + + F ++ Sbjct: 569 LGGDEFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPI 628 Query: 453 PLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR 512 L+ +S + ++ + + + + + +R A+++ ++ ++ QP+ Sbjct: 629 LLMRNADAAMYRSKREGKGV-FRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLV 687 Query: 513 N---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 + G + +L G ++P++F+PL + L VL + + A+ Sbjct: 688 DSGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRP 747 Query: 570 KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 +VN+ ++ + + + P + LE+TE + + ++ I++ Sbjct: 748 DHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQE 807 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L G AIDDFGTG+++ L+R D +KID F+KD+ N DA +V+SI +A + Sbjct: 808 LESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANS 867 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 SL VV E VET Q+ L G QG+L RP P D Sbjct: 868 MSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKD 907 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 99/464 (21%), Positives = 176/464 (37%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + + + + R A D LT LPN Sbjct: 396 RRSGEIYPEWLSITAITEGDGGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPNRLL 455 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + L +D + ++ G + +R + + L ++E + Sbjct: 456 LQDRLGQAILKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETD 515 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E ++VL E + + + L + + G+ Sbjct: 516 TVARQGGDEFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDG 575 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LL ++ A ++ + ++LL + +R ALD+ +L LY Sbjct: 576 ADPSMLLRNADAAMYRAKADGRN-GFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYF 634 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + EG + +L D G++ P +F+P + L VL + L Sbjct: 635 QPKVNAADGCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRA 694 Query: 566 HPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL ++I + + + + LE+TE + E ++ Sbjct: 695 WIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTI 754 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G +AIDDFGTGY++ L++ + +KID FV DI + D I ++ Sbjct: 755 ATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVI 814 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA L+V AE VET QQ L + G LQG+L G+P+P Sbjct: 815 ALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAE 858 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 110/550 (20%), Positives = 206/550 (37%), Gaps = 28/550 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-------LLCTPYENDFIAGYLVPVFFI---IFTLGV 255 E R T+ ++ + L+ D +PV I + + GV Sbjct: 401 ELAESEGRFRTIFDHVNDAIFIHRADTGRLLMVNQRMRDMYGMGDLPVDRIDVGMCSAGV 460 Query: 256 GKLRYPFLNL---TWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIY 312 + A +++ L G ++ LA LL +VR Sbjct: 461 SPYGAAEAQVWLRAAAAGQPQQFDWHARRLDGSLFWVEVSMRLARFSDGQNRLLVVVRDI 520 Query: 313 HRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 + R A DPLT LPN L+ + + L +D + ++ Sbjct: 521 TERKNAQDRLEFMAHHDPLTELPNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVN 580 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN-- 422 G ++ + L ++E++ + +L G E ++VL+ + + ++ Sbjct: 581 DSLGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKS 640 Query: 423 -SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 + I + F + L+ + + + Sbjct: 641 VAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAAMYHAKESGR-STYRFFAARM 699 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + + L + + AL++G+ LY QP + G + ++ + G+++P +F Sbjct: 700 NADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEF 759 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 +P+ L VL + A +VNL L + ++ + + Sbjct: 760 IPVAEDSGLIVPMGDWVLRQACRQAALWQAGGHALTMAVNLSALQFRRGDLERAVREALE 819 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 ++P ++ LE+TE + E+ M +L G +++IDDFGTGY++ LKR D Sbjct: 820 ESGLAPHSLELELTESIMIQDHEAVMDMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVD 879 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+ T+T +A I ++I +A + L V+AE VE + L G QG Sbjct: 880 KLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQG 939 Query: 719 YLIGRPQPLA 728 +L GRP Sbjct: 940 FLYGRPMTAQ 949 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 97/465 (20%), Positives = 177/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + + R + R A DPLT LPN R Sbjct: 383 RKTGEVYPQLLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRL 442 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + + +D + ++ G + + I L +++++ Sbjct: 443 LDDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDD 502 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ G E L+VL+ M + R ++ L + + + Sbjct: 503 TVARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDS 562 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L+ ++ + E ++ ++ +++ L + AL + +L LY Sbjct: 563 RDADTLVKHADVAMYRAKDEGRN-SFQLFEPAMNARSLERLALETALHRALPRDELQLYF 621 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP+ E + +L D G+++P F+PL L VL S + Sbjct: 622 QPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRR 681 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 VN+ ++ A + + ++P + LE+TE + + ++ Sbjct: 682 WCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRAL 741 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++ L G +AIDDFGTGY++ LKR D +KID +FV+ I NT DA +V +I Sbjct: 742 ARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIV 801 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L + L VVAE VET +L + G QG+ P P + Sbjct: 802 SLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEE 846 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 111/573 (19%), Positives = 204/573 (35%), Gaps = 32/573 (5%) Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV--LLLLLCTPYENDF 238 F L+R I A+ R +E T + A L + + ++ Sbjct: 595 PRFIVLSRDITERKQAEEALRIAATAFESQEGMTVTDAQGAVLRINRAFTEITGYSADEV 654 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + + ++ + Y + + Sbjct: 655 VGH------NPRLLQSGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAV 708 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + R + A D T LPN R L Sbjct: 709 KENGGIVTHYVGTFMDITRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHR 768 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +DN + ++ G ++ + + L + E + +L G E +++L Sbjct: 769 RQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLEN 828 Query: 408 PE-----TEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + + + + + + + F QET + LL + Sbjct: 829 LSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRAD 888 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--E 517 Q+ A L + + T + L +R A+ + LLY Q + +G Sbjct: 889 LAMYQAKAVGRN-TLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQGHLT 947 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRF 575 G + +L + G++ P +F+ L L VL++ LA + Sbjct: 948 GCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTV 1007 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ Q + +++ + +PQ + LE+TE + E + + L + G Sbjct: 1008 AVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGV 1067 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++DDFGTGY++ LKRL D +KID FV++I+ + DA I R + L + L+V+ Sbjct: 1068 GFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVI 1127 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VE + Q+ L +LG QGYL RP PL Sbjct: 1128 AEGVEIEAQRDFLARLGCHACQGYLFCRPLPLD 1160 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 98/472 (20%), Positives = 183/472 (38%), Gaps = 24/472 (5%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRW----HLQAL---T 328 + + Y + S+ ++ R Sbjct: 303 HEHLRAGHEKRTYEIKASPLYNEDHSIRGIIETSRDLTDILNSEAELNEKTQHLQFVTTH 362 Query: 329 DPLTLLPNFRALEQAPEQEAGK--------SFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN E+ K + + +D + ++ G + ++ + Sbjct: 363 DQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVA 422 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 + L +++ + L ++ G E L+++ + + + + L + Sbjct: 423 KRLSTSIRKTDTLARMGGDEFLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGHELFITP 482 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + + LL Q+ ++ + ++ L + +R Sbjct: 483 SMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKC-QFYTAEMNSRAKTRIELESYLRK 541 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A++Q +LY QP + E G + +L G+++P+ F+PL + + Sbjct: 542 AVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEW 601 Query: 555 VLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL+ R +VN+ P + I R+ + I P+ + LEITE Sbjct: 602 VLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITE 661 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + +S++ ++QL G +AIDDFGTGY++ LKR +KID FV+DI T+ Sbjct: 662 SLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTD 721 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 DA I +++ LA + +L VVAE +ETQ+Q L + G + QGYL P Sbjct: 722 DNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPV 773 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 94/465 (20%), Positives = 179/465 (38%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 Y + + V + + R + H A D LT LPN Sbjct: 449 HKSGRIYPKWMSITAVRDEHGKVVNYISIARDTTEQTEAEKNIHFLAYYDVLTGLPNRTL 508 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + S L +D ++++ G + ++S+ + ++E + Sbjct: 509 LRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGD 568 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E +++L E + L + + + + Sbjct: 569 TVARLGGDEFIVLLREAG-ESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQA 627 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ ++ ++ + + +R AL++G+L L Sbjct: 628 QDADTLIKNADMAMYRAKEEGRN-NFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQY 686 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ G ++P +F+P+ + VL + +A Sbjct: 687 QPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAE 746 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL L Q ++A I + + + + LEITE + +++ Sbjct: 747 WRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAF 806 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + ++ G +++IDDFGTG+++ LK++ + +KID F++DI T+ DA I+RSI Sbjct: 807 RFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSII 866 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L +L V+AE VETQ+Q L G +QGY RP D Sbjct: 867 SLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAED 911 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 105/464 (22%), Positives = 191/464 (41%), Gaps = 18/464 (3%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + T Y +++L + + + A D LT LPN Sbjct: 579 RKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHIRHMAEHDFLTDLPNRAL 638 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + Q + + L +D+ + ++ G ++ + + L ++ ++ Sbjct: 639 IHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSD 698 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +L++ + + L R + L + F N Sbjct: 699 TVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNG 758 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 LQ LL + A ++ Q +++ L N +R AL++ L L Sbjct: 759 SELQELLVSADLAMYHAKAQGRNR-YQFFTPELNAQVAERLTLENHLRQALERQQLYLVY 817 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N+ G + +L + G+++P +F+PL + L VL+ + A Sbjct: 818 QPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAA 877 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 R +VN+ L Q ++ + R+ + + LE+TE +AE ++ Sbjct: 878 WLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVR 937 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +++ + G +A+DDFGTGY++ LKR D+IKID FV ++ N DA IV +I Sbjct: 938 HLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQ 997 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA+A + +AE VE+++Q L + G +QGYL GRPQ + Sbjct: 998 LAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGE 1041 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 111/465 (23%), Positives = 202/465 (43%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 ++ +++++ + + + R H A D LTLLPN + Sbjct: 757 HKEGFDFPKWLMMSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLS 816 Query: 340 LEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ E + + + +D+ + ++ G + + + R L +M ++ Sbjct: 817 LQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDD 876 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++VLS + + + L S + +N L F + Sbjct: 877 IVARLGGDEFVVVLSDTDHDRVA-KVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDG 935 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++++ L+ ++ A ++ T++ + +R A+ +LLLY Sbjct: 936 DSVEALMKNADMAMYRAKAAGRN-NYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYY 994 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + ++ + G++ PD+F+P+ + ++ VLE+ L LA Sbjct: 995 QPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAE 1054 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 KG R +VNL L + I II + ++ + A+ LEITE A E + Sbjct: 1055 WRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNA 1114 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L + G +AIDDFGTGY++ LK L D +K+D FVKDI ++ DA I + Sbjct: 1115 KLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATI 1174 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L+VVAE VE + Q LL +G +QGY +P D Sbjct: 1175 SMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 105/495 (21%), Positives = 197/495 (39%), Gaps = 19/495 (3%) Query: 252 TLGVGKLRYPFLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LY 307 L G+ F W A+ + + + Y+ + + + S + + Sbjct: 238 LLASGRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIA 297 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDN 359 + R A DPLTLLPN L+ + + L +D Sbjct: 298 IYAEITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDR 357 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G ++ H ++ + + L ++E++ + + G E +++L ++ + H+ Sbjct: 358 FKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAG 417 Query: 420 ILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDS 476 + + I N L++ + F + L+ +S A Sbjct: 418 KIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQ-FQF 476 Query: 477 REEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMT 534 ++ +++ L N + A+++G+ L QP + G + +L G++T Sbjct: 477 FTADMNAHALERLALENDLHRAVERGEFRLMFQPQFEGSGSIIGAEALLRWQHPQRGLVT 536 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ + L VLE + + SVN+ L QKN+ I Sbjct: 537 PAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELI 596 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 RL +I P + LE+TE + ++ + +L + G R+AIDDFGTGY++ L+ Sbjct: 597 RRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLR 656 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 +KID FV+D+ I +I LAK ++ V+AE VET QQ + L Sbjct: 657 SFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCC 716 Query: 714 QYLQGYLIGRPQPLA 728 QG+ +P Sbjct: 717 DEFQGHFFSQPVSPE 731 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 99/471 (21%), Positives = 193/471 (40%), Gaps = 24/471 (5%) Query: 281 FLQGVETEYSLAFILAVLISFSVCLLY-MVRIYHRSEWLNRRW-------HLQALTDPLT 332 +++ ++ L ++ ++Y +VR + + H QA D LT Sbjct: 334 YIRADGEKFLAEVTLTPIMLGKRHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALT 393 Query: 333 LLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN E + + +DN + ++ G + + + + L Sbjct: 394 GLPNRTLFSDRLEHGLKLAERHLGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLK 453 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAW 441 +++ + L +L G E +++ + ++ + + + +H L + Sbjct: 454 AKIRQEDTLARLGGDEFTIIMENFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGI 513 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + + L+ ++ ++ ++V++ ++R A+ Sbjct: 514 SFYPQDTQNANDLVKYADAAMYKAKEEGRN-NFQFYSTEMTTLAYERVVMEASLRQAIKN 572 Query: 502 GDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + +LY QP N + G + ++ G++ PDKF+PL + L D V+ + Sbjct: 573 EEFILYYQPQVNAQTSRMTGMEALIRWEHPHLGMILPDKFIPLAEESGLILEIDRWVMRT 632 Query: 559 LLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 +K + P S+NL L +N I P+ + E+TE Q Sbjct: 633 AMKQVREWYARGLDPGVLSLNLSMRQLKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQMM 692 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 + ++ ++ ++ G IAIDDFGTGY++ LKRL +KID F+ I + +A Sbjct: 693 KRPDDAVASLGEIKSMGISIAIDDFGTGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENA 752 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV++ LAK+ SLS++AE VE ++Q+ L G +QGY GRP Sbjct: 753 AIVKATIALAKSLSLSIIAEGVENEEQKEFLLFNGCISMQGYYYGRPMTAD 803 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 103/483 (21%), Positives = 194/483 (40%), Gaps = 19/483 (3%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWL 318 + A++ ++ + + +A + + + ++ Sbjct: 537 IAAIRQALAANREVSAVLRNYRKDGALFWNQLYIAPVPDADGQTTHHIAVINDVTALIRY 596 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLM 370 + QA D LT LPN L G + + +D + ++ G Sbjct: 597 QEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHS 656 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ---HMVNILNSRQIH 427 + + + L + ++ + + G E ++V++ E L V S + Sbjct: 657 VGDRLLSVVADRLARCARASDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASISEPVW 716 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 + T L +G F + + + L+ + ++ + ++ Sbjct: 717 LDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRN-TFQFYQPEMNVSAGA 775 Query: 488 QVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 ++ L +R AL + LL+ QP + + G + ++ + G++ P +F+P+ + Sbjct: 776 RLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEE 835 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHIS 603 L VL + + P R SVNL Q++IA ++++ + + Sbjct: 836 SGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLD 895 Query: 604 PQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKID 663 PQ + LE+TE NAE ++ + +LH G +AIDDFGTGY++ LKR D +KID Sbjct: 896 PQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKID 955 Query: 664 GVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGR 723 FV DI ++ D I +I LA + +L V+AE VET Q L + +QGY + Sbjct: 956 RSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAK 1015 Query: 724 PQP 726 P P Sbjct: 1016 PLP 1018 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 111/587 (18%), Positives = 222/587 (37%), Gaps = 34/587 (5%) Query: 175 AVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-----L 229 +I + Y ++ P + E + ++ A +L+ + Sbjct: 538 GTVIDVEISGYPLQLHGKPALFNSSRDITERKKIEVEIQIAATAFEAQEGMLITDADRNI 597 Query: 230 LCTPYENDFIAGYLVPVFF---IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L I GY + + + + + Sbjct: 598 LRVNRAFTDITGYSAEEVIGKNPRILSSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNG 657 Query: 287 TEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 Y + + + + + + A DPLT LPN R L Sbjct: 658 EVYPERLAITAVKDARGVVINYVASLSDITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDR 717 Query: 344 PEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +Q + L +DN + ++ G + ++ + + L ++E + + + Sbjct: 718 LQQALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVAR 777 Query: 396 LPGSELLLVLSGPETEGRLQ---------HMVNILNSRQIHWNNTGLDMGYGAAWGRFDG 446 + G E +++L E +++ LN + H + FD Sbjct: 778 IGGDEFVVMLEDLSAESIEAASQTEAVGWKIISTLN-KPYHLEKFEVHSTPSIGATLFDS 836 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + L Q Q+ + + + + L +R ++++ + L Sbjct: 837 RPQIIDDLFKQADIAMYQAKKAGRN-TMRFFDPQMQDTLNTRTALEADLRKSIERREFNL 895 Query: 507 YAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 + Q + G + ++ + G+++P +F+PL + +L L VL+ L Sbjct: 896 FYQIQVDEMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLK 955 Query: 565 THPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 T + + +VN+ Q + A ++ ++Y I P + LE+TE N E Sbjct: 956 TWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIED 1015 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 ++ + L + G + ++DDFGTGY++ + +K+L + +KID FV D+ + D IVR+ Sbjct: 1016 TILIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRA 1075 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I +AK+ L V+AE VETQ+Q+ LL G + QGYL +P P+ + Sbjct: 1076 IIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIRE 1122 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 125/697 (17%), Positives = 239/697 (34%), Gaps = 43/697 (6%) Query: 64 VVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ 123 + L + G + I G + R + Sbjct: 337 FGGMKMAWIGMLDEADQLIKPAASFGSGVEYLE---GIEISVDLSGDKGRGPTGTSIRED 393 Query: 124 RLFWLGLVT---PIGIKCSM---YLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVL 177 R FW + G+ PL + FT+ + Sbjct: 394 RPFWCQDFQHDDATAAWHERGERFGWGASASLPLHLK---DRVIGAFTLYAGEACAFDEA 450 Query: 178 IYNMLFYYLTRM-IVSPHFAQILWRRDIAP-SLGKEKRAFTLSWLAALSVLLLLLCTPYE 235 N+L + FA R+ + E+R + +V + L Sbjct: 451 AQNLLLEMALDISFALDRFADERERKIMQDDLRDSEERYRKAFQTSPDAVNITRLVDGLY 510 Query: 236 NDFIAGY-----------LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQG 284 D G+ + + G R ++ + N F++ Sbjct: 511 VDVNTGFERITGWRHDEVVGKTATELNLWGNPADRMRLVDALQSEGRCN--NLEATFVKK 568 Query: 285 VETEYSLAFILAVLISFSV-CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA 343 + + V C+L + R + + A D LT LPN L Sbjct: 569 NGDIFHGLMSAEKVRFKDVDCILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDR 628 Query: 344 --------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 + L +D+ + ++ G + + + R L ++E + L + Sbjct: 629 FRYALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSR 688 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 L G E +L+L G + Q +L + + L + + + + Sbjct: 689 LGGDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFET 748 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR- 512 L + + + + + + L+N +R AL + + L+ QP Sbjct: 749 LSKNADAAMYRVKQASRND-FRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVA 807 Query: 513 --NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK 570 + G + +L + G+++P +F+P+ VL + ++ L Sbjct: 808 LQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAG 867 Query: 571 -KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQ 629 + +VNL + N+ + R+ + P+ + LE+TE A + +++ + + Sbjct: 868 LRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNK 927 Query: 630 LHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKA 689 L + G R++IDDFGTGY++ LK+ + + +KID FV+DI + D IV +I +LA + Sbjct: 928 LDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASS 987 Query: 690 KSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 + +AE VET Q A L G +QGY + +P P Sbjct: 988 LGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLP 1024 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 104/466 (22%), Positives = 191/466 (40%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 Q + + V+ + +L + A D LT LPN Sbjct: 582 QKNGNGFDVELQAQVVKDQNGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTL 641 Query: 340 LEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ A + L +DN + ++ G IRS+ L + + Sbjct: 642 LKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCD 701 Query: 392 KLYQLPGSELLLVLSGPET----EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 L + G E +L+L+ + + + +L R + ++ + + Sbjct: 702 TLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQD 761 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 + + LL + ++ + ++ Q ++ + +R+AL +G++ L Sbjct: 762 GQDPETLLKRADTAMYEAKKNGRN-GYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLV 820 Query: 508 AQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + +L + G ++P +F+PL + L VL+ + A Sbjct: 821 YQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGA 880 Query: 565 THPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + +VNL Q ++A I ++ + +SP + LEITE N E++ Sbjct: 881 IWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAA 940 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + +L K G + +IDDFGTGY++ LK+L D IKI FV+DI T+ D I+++ Sbjct: 941 IEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKAT 1000 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AK+ + ++AE VE QQ A L G +QGY +P P + Sbjct: 1001 IAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 95/501 (18%), Positives = 191/501 (38%), Gaps = 19/501 (3%) Query: 247 FFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSV 303 F L + L + + + + LA + Sbjct: 382 LSPRFLLANDLAQPGLERLRNCMRHGGSARAILRNYRKDGSLFWNEVALAAVHNEHGEIA 441 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCL 355 + + + QA D LT LPN L E + L Sbjct: 442 HFISVFNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHTKLAVLLL 501 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + I+ + + +++++ + +L G E +++ + E Sbjct: 502 DLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDIRDERAAA 561 Query: 416 HMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L + ++ N + F + + L ++ Sbjct: 562 TLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRAKDVGRN- 620 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 ++ + +++ L ++R A+ L L+ QP + + + ++ Sbjct: 621 GFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHPQ 680 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLTLLQKN 588 G+++P F+P+ + L V+E + LA + R ++N+ L Sbjct: 681 LGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAYQLSHGK 740 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++I+ + PQ++ +E+TE + ++ ++ L + G R+A+DDFGTGY++ Sbjct: 741 LTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYSS 800 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR DI+KID FV DI + IV++I +LA +++VVAE VET+ Q L Sbjct: 801 LTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEFL 860 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 G +QGY +P P + Sbjct: 861 RTNGCDEVQGYYFCKPLPSEE 881 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 101/468 (21%), Positives = 193/468 (41%), Gaps = 24/468 (5%) Query: 284 GVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 + Y + +A I + + + + + + AL DPLT LPN R L Sbjct: 778 KDGSLYWVDTTIAPFIGDDGKPQSYISIRTDITQRKAAEDKSNYLALYDPLTNLPNRRLL 837 Query: 341 EQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 G + L +D+ + ++ G + ++ + L ++E + Sbjct: 838 LDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDT 897 Query: 393 LYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRF 444 + +L G E +++L G E + + + + + + + F Sbjct: 898 VARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLF 957 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 N LL Q Q+ AL + + +V + + +R ALD+ + Sbjct: 958 GKNNLKSDELLKQADIAMYQAKKLGRN-ALSFFDPKMQEGIQARVDMEHELRKALDKNEF 1016 Query: 505 LLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 L+ Q + G + ++ + + G++ P++F+ + + V+++ Sbjct: 1017 QLFYQMQVGLSDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQ 1076 Query: 563 LATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L + SVN+ Q + ++ R+ I+P + LE+TE + Sbjct: 1077 LKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHI 1136 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E ++ + L G R ++DDFGTGY++ + L+ L +KID FV+DI ++ + IV Sbjct: 1137 EDAVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIV 1196 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 R+I +A +L+V+AE VETQ QQ +L G + QGYL P P+ Sbjct: 1197 RTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPID 1244 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 101/451 (22%), Positives = 184/451 (40%), Gaps = 16/451 (3%) Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PE 345 +L L + + +RI + + QA DPLT LPN L Sbjct: 178 LLEELANNLAHGILSLRIMAEHKRYEEQLAYQATHDPLTALPNRNLLADRISQALAWAQR 237 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + + +D +F++ G ++ + L +++ + L G + ++VL Sbjct: 238 HRRWIAVLFVDLDFFKFVNDSLGHGKGDQLLKMVAERLSERVRQVDTLAHQGGDKFVVVL 297 Query: 406 SGP---ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 + E R H++ S + L + + + E Q L+ Sbjct: 298 TDLRGNEEADRAVHVIREAISLPFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVAM 357 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGY 519 ++ ++ + ++ + +R AL+ + L+ QP + G Sbjct: 358 YRAKEQGRN-CFRYYTRELNERVASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGM 416 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVN 578 + ++ + G++ P F+PL + L + V+ + +VN Sbjct: 417 EGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVN 476 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L P + + G I + + + P+ + LEI E + ES+ + +L G +++ Sbjct: 477 LSPRQFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLS 536 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 +DDFGTGY++ LKR +KID FV+DI+T+ A I +SI +A +LSVVAE Sbjct: 537 MDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEG 596 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET+ Q L G +QGY + RP P A+ Sbjct: 597 VETEGQLEFLRAHGCNEIQGYYLSRPLPAAE 627 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 101/502 (20%), Positives = 185/502 (36%), Gaps = 23/502 (4%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CL 305 + ++ ++ + Y + + Sbjct: 898 PRLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSF 957 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + RR H A D LT LPN + L + Sbjct: 958 VCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDL 1017 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEG----R 413 D + ++ G ++ + L + +++ + ++ G E L+L R Sbjct: 1018 DRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKR 1077 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 + ++ +R + + L L+ + Sbjct: 1078 AIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGK 1137 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLK 527 + ++ + +++ L + +R AL+ G+ +L+ QP G + +L Sbjct: 1138 N-NFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQH 1196 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQ 586 G++ P +F+P++ + L A+ +L K L + K + P+ SVNL Sbjct: 1197 PRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFAD 1256 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + RI + I P + LE+TE S+ +M + L + G IA+DDFGTGY Sbjct: 1257 GQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGY 1316 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ LK+ D++KID FV + DA I R+I +A + +L V+AE VE+Q Q Sbjct: 1317 SSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLD 1376 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L + G +QGYL GRP P Sbjct: 1377 FLREHGCDEVQGYLFGRPMPAE 1398 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 667 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 105/505 (20%), Positives = 194/505 (38%), Gaps = 24/505 (4%) Query: 248 FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVC 304 G G + + A+ + + + +A Sbjct: 476 MPGMLQGPGTRQDELARIFSALQQWKQARGELVIYRKDGGSFWVDLEIVSVAAQNGDLTH 535 Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLR 356 + + R + + + + H A DPLT LPN + L EQ + Sbjct: 536 WVAVGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQALADCTITRQEGVLMFID 595 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE----- 411 +DN + ++ G ++ + L +++ + + +L G E +++L T+ Sbjct: 596 LDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGDEFVVMLQDLGTQPEAAT 655 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + Q + + + F+ Q ++ LL Q Q+ Sbjct: 656 RKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTM 715 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARL 526 + + + + L +R L + L++ QP ++ G + +L Sbjct: 716 GRN-TVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQVDREQRITGVEALLRWK 774 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTL 584 G+++P +F+P+ + L VLE LA + G +VN+ Sbjct: 775 HPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQF 834 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + ++ K I P + LE+TE E ++ + L G +A+DDFG Sbjct: 835 RHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGM 894 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL D +KID F+ D+ ++ DA I +I LA++ L V+AE VET+ Q Sbjct: 895 GYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQ 954 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 ++ L LG Y QG+L P P+A+ Sbjct: 955 RSFLAGLGCGYYQGFLFCPPLPIAE 979 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 98/470 (20%), Positives = 184/470 (39%), Gaps = 24/470 (5%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + +A + + L + + + A D LT LPN R Sbjct: 558 RKDGSLFWEQAAIAPIFDDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRL 617 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L +Q + + +DN + ++ G ++ + + L ++E + Sbjct: 618 LNDRLQQVLAVGTRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECD 677 Query: 392 KLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 + +L G + +++L E + + + + + + + Sbjct: 678 TVARLGGDDFVVMLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVAL 737 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F+ +Q+T++ LL + Q+ L + + + + + +R L + Sbjct: 738 FNASQDTVEELLKRADLALYQAKDAGRN-TLRFFDPDMQAVISARAEMEADMRLGLQENQ 796 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 LLY QP N G + ++ G++ P F+PL L V+E+ + Sbjct: 797 FLLYYQPQVNHAGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACR 856 Query: 562 WLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 L +VN+ L ++ ++ R + LE+TE + Sbjct: 857 QLQLWRTQAHTAQLTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKD 916 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 + + + L G ++DDFGTGY++ LKRL D IKID FV D ++N DA + Sbjct: 917 VDGVIAKMVALKAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAAL 976 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VR+ + + + V+AE VETQ Q+ L G QGY GRP P+A+ Sbjct: 977 VRATVAMGRGLGMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAE 1026 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 109/535 (20%), Positives = 203/535 (37%), Gaps = 39/535 (7%) Query: 233 PYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA 292 + D ++ ++ G + P + N+ +G E + Sbjct: 278 YWARDLEGRCIMENALVVEHWGSLLGKRPEDSGVSPDELAVWQENNRRVYEGEVIEAEVE 337 Query: 293 F-----------ILAVL--ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + ++A + ++ ++ + + H A D LT LPN R Sbjct: 338 YQVGGQTRIFNNVVAPIKVDGQTIGIVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRL 397 Query: 340 LEQAPEQE--------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + E + + + +DN +F++ +G + + + + L +++ + Sbjct: 398 MFDRLEHALIGSARRKSHGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGD 457 Query: 392 KLYQLPGSELLLVLSGPETEG----RLQHMVNILNSR---QIHW------NNTGLDMGYG 438 +L G E +++L + G + + + + ++ + Sbjct: 458 TAARLGGDEFVVILEDIDGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASS 517 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 FD T + LL + Q+ A L + + T + L +R A Sbjct: 518 IGIALFDDTMVTAKELLRRADTAMYQAKAAGRN-TLRFFDPEMQAAVTHRAALETELRKA 576 Query: 499 LDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 +D+ L Q + G + +L G + P F+PL + L VL Sbjct: 577 IDEQQFHLCFQVQMDQSGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVL 636 Query: 557 ESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 + + LA G +VN+ Q ++ L + + LE+TE Sbjct: 637 ATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTES 696 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 + E+ + + +L + G R ++DDFGTGY++ LKRL + +KID FV+D++T+ Sbjct: 697 MMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDP 756 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA I +I L L V+AE VET Q L +G + QGYL GRP PL + Sbjct: 757 NDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLE 811 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 106/578 (18%), Positives = 205/578 (35%), Gaps = 37/578 (6%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 L + +I RD E S +++ + +F Y+ P Sbjct: 319 LLVSLAQRVTVEIRAHRDRHGRQAAEAALRLRERAIECSANAVIISSAQVPEFAIEYVNP 378 Query: 246 VFFIIFTLGVGKL--------------RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSL 291 F I + + + A++ + + + Sbjct: 379 AFERITGYTAAEAIGRSSSFLLRNDHEQAGLYEIRAALAEKREGKAVLRNYRKNGSLFWN 438 Query: 292 AFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP---- 344 +A + + + + + H A D LT LPN L+ Sbjct: 439 DLYIAPVKDDEGKTTHFVAAMSDITPMKQYETTLHRLASHDVLTGLPNRALLQDRLENAI 498 Query: 345 ----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + +D +F++ G ++ I L ++E++ + +L G E Sbjct: 499 AYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARLGGDE 558 Query: 401 LLLVLSGPET------EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 +LVL +Q ++ + + + + + + + L Sbjct: 559 FVLVLPECGDGPSGYSSDVIQRIMEAVV-KPLTIQGSEFFLSCSMGIAVYPNDGADPTTL 617 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L +S ++ Q +++ + +R A++ +L+L+ QP + Sbjct: 618 LAHADVAMYRSKELGRN-NFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQPQVDL 676 Query: 515 E---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + ++ G++ P F+ L + L VL++ + Sbjct: 677 HTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGF 736 Query: 572 -GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R +VNL Q ++ I + + + + +E+TE ++ E ++ + L Sbjct: 737 TQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRDL 796 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G ++++DDFGTG+++ LKR D +KID FV+DI N DA IV SI LA Sbjct: 797 KSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNL 856 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L+V+AE VET Q +L G +QGY +P P Sbjct: 857 KLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSD 894 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 102/490 (20%), Positives = 186/490 (37%), Gaps = 27/490 (5%) Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWL 318 FL T A + ++ +L + + + Sbjct: 997 FLRATRATQEQGEWAGEIVQFHRDGRRLDVEGRWTLIQGEQGQPDAILAIDTDIGQRKAT 1056 Query: 319 NRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLM 370 R A D LT LPN L G + + +DN + ++ G Sbjct: 1057 EREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDNFKTLNDTLGHD 1116 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE--------TEGRLQHMVNILN 422 ++ + L ++ + + +L G E ++++ G + + + + Sbjct: 1117 QGDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIEGLSTHPGELAMSARTVGEKILAVL 1176 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQET--LQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + F G+ T + LL Q Q+ L + Sbjct: 1177 ATPYVLQGYHYRSTPSIGVAPF-GDGRTSTVGELLKQADLAMYQAKTAGRN-TLRFFDPG 1234 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG--EGYDEILARLKYDGGIMTPDKF 538 + T + L N +RTAL + +L+ QP ++ G G + ++ G+++P +F Sbjct: 1235 MQAVVTARAELENDLRTALAREQFMLHYQPQIDRRGSVTGVEALVRWPHPQRGMVSPGEF 1294 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRL 596 +PL + L VL + LA + +VN+ + ++R Sbjct: 1295 IPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRA 1354 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + LE+TE + E+++ + L G ++DDFGTGY++ LKR+ Sbjct: 1355 ITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMP 1414 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV+D++ + DA IV +I L+++ L V+AE VET +Q+ L + G + Sbjct: 1415 LDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAY 1474 Query: 717 QGYLIGRPQP 726 QGY RP P Sbjct: 1475 QGYFFSRPLP 1484 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 108/525 (20%), Positives = 204/525 (38%), Gaps = 23/525 (4%) Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN 280 T Y + + G P++ R + L + L + + Sbjct: 352 ILAVNAAFGEITRYPVEALLGRTPPLWRTAHQDAAF-YRRIWRQLLASGRWEGELWHRK- 409 Query: 281 FLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 T + L ++ + +++ + + + A DPLT LPN Sbjct: 410 ---RDGTPFPLWLSISCVRDEQGRPRQYVFVFNDISQLKDSQEQLERLAHYDPLTGLPNR 466 Query: 338 RA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 LE+A + + +D + ++ G + +I + L +++ Sbjct: 467 HLALARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQ 526 Query: 390 NEKLYQLPGSELLLVLSGPETEGRL--QHMVNILNSRQIHW-NNTGLDMGYGAAWGRFDG 446 + L +L G E L+V+ + H + + + + +G + G Sbjct: 527 EDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPG 586 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 + + L+ + A A E ++ +++ + ++R AL + +L Sbjct: 587 DGRSASELIRNADAAMYLAKAQGSN-AYRFYTESLTRAANERLSMETSLRRALRCEEFVL 645 Query: 507 YAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 + QP+ + G + ++ ++ P +F+PL + L VL + Sbjct: 646 HYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQG 705 Query: 564 ATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VNL P L+ ++ G++ + + + P + LE+TE AE + Sbjct: 706 KAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQA 765 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L + G +AIDDFGTGY++ LKR D +KID FV+D+ ++ DA IV +I Sbjct: 766 VKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTI 825 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + + L +AE VET QQ A L +LG QGYL P P Sbjct: 826 IAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAE 870 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 128/572 (22%), Positives = 210/572 (36%), Gaps = 26/572 (4%) Query: 180 NMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFI 239 ++ S A+ L R+ + ++ + A + L + Sbjct: 466 TAFITSTLQIFASRVAAE-LERQSADAHIRRQASLLDKAQDAIMVRGLDDAIRYWNKGAE 524 Query: 240 AGYLVPVFFIIFTLGVGKL---RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 Y + L F T V N L+ T + Sbjct: 525 RLYGWKADEVTGRSTEMLLYGDPTAFRENTRKVIAHSEWNGEITQLRKDGTALVVEAHWT 584 Query: 297 VLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------EQE 347 +L + +L + + + H A DPLT LPN L Sbjct: 585 LLRDENDQPDAILAINTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQVRHG 644 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + +DN + ++ G M ++ I + L +++ + L ++ G E ++VL G Sbjct: 645 QVGALLLIDLDNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIVLEG 704 Query: 408 P-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 + + + + R + F+ TL L + Sbjct: 705 LSASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRAD 764 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE-- 517 Q+ AH AL + + + L +R AL G L+ Q + G Sbjct: 765 LAMYQAKAHGRN-ALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDARGCVS 823 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRF 575 G + +L G + P F+PL + L L VL+ L Sbjct: 824 GAEALLRWQHPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSL 883 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ Q + A +++ +R P+ + LE+TE N + ++ + L G Sbjct: 884 AVNVSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGI 943 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++DDFGTGY++ LKRL D IKID FV+D++ + DA I RSI L ++ +L VV Sbjct: 944 GFSLDDFGTGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVV 1003 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 AE VET Q A L + G Q QGYL RPQP Sbjct: 1004 AEGVETDAQHAFLAEHGCQAYQGYLFNRPQPA 1035 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 106/432 (24%), Positives = 184/432 (42%), Gaps = 16/432 (3%) Query: 312 YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFM 363 + + R AL D LT LPN LE+ E + + + +D + + Sbjct: 490 INERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLV 549 Query: 364 SRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS 423 + G + + L ++ N+ + +L G E ++VL+ + ++ + Sbjct: 550 NDTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQ 609 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 + + + + + ET L+ + A A Sbjct: 610 NFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCA-QYFNRS 668 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDK 537 + +++ L N + AL G LY QP + G + ++ + G+++PD Sbjct: 669 LDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDA 728 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRL 596 F+PL + L VL LA SVNL L + +++ A + + Sbjct: 729 FIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADV 788 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 + Y + + LE+TE NAE ++ ++++H G +I++DDFGTGY++ LKR Sbjct: 789 IREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFP 848 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV+DI +T DAMI ++I +A +L V+AE VET Q LL G + Sbjct: 849 LDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQY 908 Query: 717 QGYLIGRPQPLA 728 QGYL +P P+ Sbjct: 909 QGYLFAKPLPVE 920 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 107/625 (17%), Positives = 222/625 (35%), Gaps = 38/625 (6%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTR-----------MI 190 ++ I+ + + + LLSL T Y R + Sbjct: 157 IIACLSFLGFAIALWLANVSSNRLSQRLLSLETTAHNIISNGNYSLRAQKVENDTISNVT 216 Query: 191 VSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVL---LLLLCTPYENDFIAGYLVPVF 247 + + +++ E++ ++ + + + + C + +PV Sbjct: 217 TNFNQMLDFFQQQDTQLRDSEEKFRLINETSKVGIFQLDINGTCVYANTELSLITGLPVN 276 Query: 248 FIIFTLGVGKLRYPFLNLT---WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SF 301 I+ + + + + W V + + N +A + +L Sbjct: 277 EILESNWLTAIHPEDRSTVEEQWQVMLDNNQSLDLNCRLKTPQTKFIAAYVRLLRRSDGR 336 Query: 302 SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFC 353 + + + + ++ A D LT L N R E ++ Sbjct: 337 LIGYIGAINDVSEIKNAQTQFEEMAYYDMLTGLANRRLFRNRLEHVVSNLKKEQSSLGLI 396 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 + +D + ++ G ++ + L ++ ++ + +L E ++L G + Sbjct: 397 LVDLDRFKSVNDAMGHDAGDKLLKIVAGRLQQCVRASDTVARLSSDEFAIILPGIKNSRT 456 Query: 414 LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 H+ + + + N T + N + ++ + + Sbjct: 457 TAHVAEKVLTAIQQPVLINETEQRLTASIGIAIAPQNGTDAKTIIKNADLALFHAKDNGR 516 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLK 527 ++ Q +V L + ++ A+ D L QP G++ ++ Sbjct: 517 N-NYQFFTVEMNIQLIDRVALTHDLKQAVKNSDFTLVYQPKICLKQGNLVGFEALIRWNH 575 Query: 528 YDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD---KKGPRFSVNLMPLTL 584 G + P +F+P+ Q L V+ + + L T + +VNL Sbjct: 576 KIRGAVGPTEFIPVAEQTGLIIPLGRWVITTACEQLRTMYDEEIVNDSVSMAVNLSAHQF 635 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 +++ I + I P +E+TE N ++++ +E L + G +I+IDDFGT Sbjct: 636 QDEHLVDFIRDRINTFDIKPGQFEIELTESVLMENFDNAIEKLEALRQLGIQISIDDFGT 695 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL + +K+D FV DI + D I ++ +A + +VVAE VET+QQ Sbjct: 696 GYSSLGYLKRLPVNTVKVDRSFVTDIPNDKSDMEITSAVIAMAHNLNYTVVAEGVETEQQ 755 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L G Y QGY +P P + Sbjct: 756 LQFLEHSGCDYGQGYFFSKPLPDHE 780 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 108/446 (24%), Positives = 197/446 (44%), Gaps = 23/446 (5%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK--------SFCCLR 356 ++ + A DPLT LPN R L+ +QE + + Sbjct: 365 MVGGFYEVTERKKAEEAIQNLAFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFID 424 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET------ 410 +D+ + ++ G +R + L ++E + + ++ G E +L+L + Sbjct: 425 LDDFKTLNDTLGHDTGDKLLRQVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAA 484 Query: 411 ---EGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E Q ++ +LN + ++T F G+QETL+ LL Q+ A Sbjct: 485 THAELVAQKVLRVLN-KPYLLDSTPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKA 543 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILAR 525 + + + + ++ ++R A+ +L+ QP N + G + ++ Sbjct: 544 KGRN-TVRFYDTTMQEVVNAKSVMEASMRQAITGQQFVLFYQPQINSNGQIIGAEALVRW 602 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLT 583 G++ P+KF+PL + VL++ + L +VN+ Sbjct: 603 RHPQKGLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQPATAQITMAVNVSARQ 662 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 Q ++ + R+ + +PQ + LE+TE + E + ++ L K G ++DDFG Sbjct: 663 FHQIDLVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFG 722 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LKRL D +KID FV+DI+ ++ DA I R++ LAK+ +V+AE VE + Sbjct: 723 TGYSSLAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIE 782 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q +L +G + QGYL GRP P+ + Sbjct: 783 QHQMLIDMGCRVFQGYLFGRPVPIEE 808 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 118/569 (20%), Positives = 223/569 (39%), Gaps = 30/569 (5%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFT---LSWLAALSVLLL-----LLCTPYENDFI 239 R++ +L R+I +E + + + ++L+ ++ + I Sbjct: 207 RIVPRDRQEVLLVVREITQRRQQENQLRLWAKVFEASNEAILITDANFRIISVNRAYETI 266 Query: 240 AGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFL---QGVETEYSLAFILA 296 GY + TL VG + VS L + Q L + E+ F + Sbjct: 267 MGYREQDVLGVDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVT 326 Query: 297 VL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + + + A D LT LPN L Sbjct: 327 QVTNSRGEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRR 386 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 Q + +D + ++ G + ++ + L ++ + + +L G E +++ Sbjct: 387 QGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLF 446 Query: 406 SGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 TEG L + L + L + + + E L+ Sbjct: 447 PRVRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAM 506 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGY 519 + ++ +T ++ L + +R+A+D GD L+ QP + + G Sbjct: 507 YLAKEKGRN-NYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGL 565 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVN 578 + ++ + G+++P +F+PL + L VL +K LA SVN Sbjct: 566 EALIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVN 625 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 + L Q + R+ + + + P A+ LE+TE + +S++ ++ L + GFRIA Sbjct: 626 ISALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIA 685 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTG+++ L+ L +++KID FV++++ IV SI LA+A +AE Sbjct: 686 IDDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEG 745 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VET+ + +L G + +QGY RP P Sbjct: 746 VETRAEFDVLQARGCRLMQGYFFARPMPP 774 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 665 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 86/441 (19%), Positives = 174/441 (39%), Gaps = 16/441 (3%) Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCL 355 + ++ + + R A D LT LPN L++ + + Sbjct: 598 NYVVVLTDISQRKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFI 657 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G ++ + L +++ + + + G E ++++ + L Sbjct: 658 DLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLV 717 Query: 416 HMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 ++ + ++ L + + + + LL ++ Sbjct: 718 NVARKIMHALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKN- 776 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYD 529 + + ++ L N++R AL++ + L Q + G + ++ + Sbjct: 777 TFHFYSADGNANSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAE 836 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKN 588 G+++P F+P+ + + VL+ + + R VN+ + + Sbjct: 837 LGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDS 896 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + I + ++P + LEITE NAE + ++ G + IDDFGTGY++ Sbjct: 897 LYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSS 956 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LK D +KID FV+DI ++ D I ++I +A + ++VVAE VETQ Q L Sbjct: 957 LGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFL 1016 Query: 709 HKLGVQYLQGYLIGRPQPLAD 729 G LQGY+ RP + D Sbjct: 1017 RGQGCDQLQGYIFSRPLVVED 1037 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 105/613 (17%), Positives = 215/613 (35%), Gaps = 34/613 (5%) Query: 143 VGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRR 202 V FD ++ ++ ++ I + +Y+ R + ++ Sbjct: 113 VHDIFDAGTAVARIEASRSLTPLLLRTFAVALCSAIIAAVVFYMLRTLPLRATSRAY--- 169 Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFF------------II 250 E + L + L + DF A ++ +I Sbjct: 170 --QALDESESKYRLLYESMREGMALHHMDFDENGDFAAISVIDANPSCAAMFGCDPQTLI 227 Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVR 310 + + F + L + F + +L + A + + + Sbjct: 228 GSDSIALFGETFREYLSELLRLLEQGTSIQFELTLPRTDNLYSVHAFSPDHGL-VATLFE 286 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEF 362 ++ A D LT LPN Q E + L +D + Sbjct: 287 DITERRKSEQQIQHMAYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFLDLDRFKD 346 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + R L ++ + L +L G E +++++ + + L Sbjct: 347 INDTLGHSAGDQLLIQVTRRLGRQIRSCDTLARLGGDEFVVIVTDLGKKMNATRVAQDLI 406 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 L + F + + L+ S + Sbjct: 407 NAIQPPFLIAGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNR-YNFYSA 465 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPD 536 ++ + ++ +R AL++ + + QPI + + ++ G + PD Sbjct: 466 SMNQKALMRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRWNHPTRGRIPPD 525 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIR 595 +F+ L + L VL ++ + T RFSVN+ + +++ A + Sbjct: 526 QFIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQIERQDFAEIVRN 585 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + +E+TE ++++++ ++ L ++G AIDDFGTGY++ +K L Sbjct: 586 ALRESGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFGTGYSSLGYIKTL 645 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IKID FV+DI T+ D IV +I +++ + +AE VET +Q L + G + Sbjct: 646 PIDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRFLQERGCEE 705 Query: 716 LQGYLIGRPQPLA 728 +QGY RP Sbjct: 706 IQGYYFHRPLSAE 718 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 108/568 (19%), Positives = 207/568 (36%), Gaps = 28/568 (4%) Query: 182 LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAG 241 L Y + R + + R+ + + T ++ + CT I G Sbjct: 457 LLYSIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCT------ITG 510 Query: 242 YLVPVFFIIFTLGVGKLRYP--FLNLTW-AVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 YL + R+ F + W ++ + Y + + Sbjct: 511 YLAAEVIGRKSSMFKPERHEATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAV 570 Query: 299 I---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQE 347 + + + QA DPLT L N L+ Sbjct: 571 RDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHG 630 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 L +D ++++ G + + + R L +++ + + +L G E +V+ Sbjct: 631 CKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHD 690 Query: 408 PETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 L + + L + F + + +Q LL + Sbjct: 691 LADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYK 750 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 + A + +V L +R A++Q L+ QPI + G + Sbjct: 751 AKQAGKNRA-QPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEA 809 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLM 580 ++ + G+++P +F+P+ + L VL +++ R ++N+ Sbjct: 810 LIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVS 869 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + + + + L + + +++ EITE +E+ + + + G A+D Sbjct: 870 GVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALD 929 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTG+++ LKR DI+KID FV+D + DA +V +I ++A + L V AE VE Sbjct: 930 DFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVE 989 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + +Q+ L LG YLQGYLIG+P Sbjct: 990 SAEQREFLRALGCDYLQGYLIGKPLAAD 1017 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 110/471 (23%), Positives = 201/471 (42%), Gaps = 24/471 (5%) Query: 282 LQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 L+ ++ ++V+ + + + + QA D LT LPN R Sbjct: 565 LKKNGELHAKWLSISVIRRADGSIYRHVGQFSDITEKKRKDELIWEQANFDTLTNLPNRR 624 Query: 339 ALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 Q + L +D + ++ +G M + + R L ++E Sbjct: 625 LFADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREE 684 Query: 391 EKLYQLPGSELLLVLSGPETEG-----RLQHMVNILNS---RQIHWNNTGLDMGYGAAWG 442 + + ++ G E L++L+G +E R + + + + R + T Sbjct: 685 DTVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIV 744 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F G+ + + LL + QS A A+ + + K+ L +R AL++ Sbjct: 745 LFRGHSDDPERLLAHVDTAMYQSKAKGRN-AICFFDSSMQEILEKRGQLETALRGALERK 803 Query: 503 DLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 + LL+ Q + G + +L G ++P +F+P+ + L VLE+ Sbjct: 804 EFLLHYQLQMDSSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETAC 863 Query: 561 KWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 LA D + +VN+ + + ++ + ++ I P + LE+TE Sbjct: 864 AQLARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLD 923 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + S+ +E L G + ++DDFGTGY++ L RL D +KID FV+DI T+ DA Sbjct: 924 DINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAA 983 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IV++I +A + + V+AE VET++Q+ L G Q QGYL +P P+ + Sbjct: 984 IVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEE 1034 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 98/497 (19%), Positives = 180/497 (36%), Gaps = 16/497 (3%) Query: 244 VPVFFIIFTLGVGKLRYPFLNLTWAVSTL-CLLNYNQNFLQGVETEYSLAFILAVLISFS 302 + + + R L V+ + Sbjct: 580 LGTMEELMDAVIPLDRPALLGALEQVARAPDHATLDCRVQARPTRIVQFQIESEWQDGVL 639 Query: 303 VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCC 354 + V+ + A D LT LPN A L A + + Sbjct: 640 ERIRGTVQDVTSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHILAVLF 699 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRL 414 L +DN + ++ G + + ++ + L ++E + +L G E + +L Sbjct: 700 LDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLPRVTRAEDA 759 Query: 415 QHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + ++ L F + + LL + Sbjct: 760 AAVARKMLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGRN 819 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKY 528 ++ + +++LL N +R A+++ +L L+ QP + G + ++ Sbjct: 820 -NFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHP 878 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKN 588 D G++ P +F+P+ L VL + VN+ L + + Sbjct: 879 DFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRRAD 938 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 ++++ +P+ + LEITE +++ + +L G +A+DDFGTGY++ Sbjct: 939 FVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYSS 998 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKRL +KID FVKD+ + DA + + LA+ L VVAE VET Q+ L Sbjct: 999 LAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFL 1058 Query: 709 HKLGVQYLQGYLIGRPQ 725 G LQGYL RP Sbjct: 1059 VARGCHTLQGYLYSRPL 1075 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 20/268 (7%) Query: 16 LAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN 75 L F+L + + ++S + Y + + LS I+G R + V G Sbjct: 6 LRFSLVALGYAVVGWLSLQLAVPPGYAVPFFPAAGIALSARIIYGPRILPAVFLGSLAVQ 65 Query: 76 LWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIG 135 + S + V G + G + R L+ Sbjct: 66 IPALLQSSVAVPVWWGPALVPLGAVLQAGAGAWLAERLIGFPNPLDAPRPIIRFLLGVAP 125 Query: 136 IKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHF 195 + C + + FGDA + V++ L + Sbjct: 126 LSCLVSPTFAIPVLMGAGVISFGDATFN-WWNWWVGDTLGVVVATPLMFAFL-------- 176 Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV 255 P+ R F ++ ++++LL ++ A + F Sbjct: 177 --------GHPAADWRARRFGIAIPLGIAIVLLGFAFHQVRNWEALRVETQFSRDADHIT 228 Query: 256 GKLRYPF---LNLTWAVSTLCLLNYNQN 280 ++R L++ ++ L ++ N N Sbjct: 229 SQVRKRLDMQLDMLQSIERLITVSENVN 256 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 110/532 (20%), Positives = 197/532 (37%), Gaps = 20/532 (3%) Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 + RA + W + + ++ + + L Sbjct: 164 EWDVRAGEIYW-SDELYRIFGFTPGEPKRISKEWIYSLIHPADLPA---FKQQLLTSVKT 219 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + ++ + + G + + + V H Sbjct: 220 LQSFNMIYHTTSRSGGELVVNIQGEVERGEDGRAWLISGTVLDITARIKAESEIHHLINY 279 Query: 329 DPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LPN L Q ++ CL +D + ++ G ++ + Sbjct: 280 DTLTGLPNRSLLHDRLRQAIAQAAQDRHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVA 339 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGY 437 R L ++E++ L +L G E ++VL G +E + + + I ++ L Sbjct: 340 RRLAACVRESDTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTA 399 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 + + E LL ++ ++ + ++++L N++R Sbjct: 400 SIGIAAYPMDGEDGHTLLKHADLAMYKAKELDRN-NFHFFSHDMNIKVMERMMLENSMRK 458 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ + L QP + G + +L D G++TPD+F+ L + Sbjct: 459 ALERDEFFLVYQPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEW 518 Query: 555 VLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + + R +VNL Q + I + + P+ + LEITE Sbjct: 519 VLMTACRQNRAWQKLGFPPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITE 578 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 NA+ ++ + L + G +AIDDFGTGY++ LK +KID FV+DI TN Sbjct: 579 SAIMRNADQNIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTN 638 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 DA I I +A+ L+V+AE VET+ Q L +QGYL RP Sbjct: 639 PDDAAIAEIIIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPL 690 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 98/487 (20%), Positives = 185/487 (37%), Gaps = 22/487 (4%) Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEW 317 + W + ++ E + + + + + Sbjct: 458 WAHLTRGDIWHGEIINRRKDKSIYI-----ESATITPVKQADGKITNYVAIKEDITEKKK 512 Query: 318 LNRRWHLQALTDPLTLLPNFRALEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGL 369 A D LT LPN R L+ A + L +DN + ++ G Sbjct: 513 AEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGH 572 Query: 370 MMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR---LQHMVNILNSRQI 426 + + I + + ++E + + +L G E +++ + ++ + S+ Sbjct: 573 TVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAMHIATTLIQEI-SKAS 631 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + L + + + + LL + + + Sbjct: 632 VVEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSRN-GFHFVTPEMQLSAS 690 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 + + L N +R AL + +L LY QP N + G + +L + G+++P +F+P+ Sbjct: 691 RNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAE 750 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 VL + ++ D +VNL + QKN+ I + + Sbjct: 751 SSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQL 810 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + + LE+TE + ES + + H+ G R++IDDFGTGY++ LK+ + +KI Sbjct: 811 PNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKI 870 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F++DI + D IV +I D+A L +AE VET +Q A L G +QGY Sbjct: 871 DQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFS 930 Query: 723 RPQPLAD 729 +P P + Sbjct: 931 KPLPSVE 937 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 99/587 (16%), Positives = 218/587 (37%), Gaps = 24/587 (4%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 +F + + ++ + + + Q + + +R L+ Sbjct: 319 MAPLFRIATIEAVTAIMFLAAASIMMMLWWRRQQALYQASYYQQQLQHQMLSQRFDNLTR 378 Query: 220 LAALSVLLL-----LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 A VLL+ ++ GY + L +L W + Sbjct: 379 FANDLVLLVDAQGQIIDANERALDTYGYPEDELKTFKLKDLCDLSQQECDLFWEQLKVEQ 438 Query: 275 L-NYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLT 332 + + + + + + L+ ++R + + QA DPLT Sbjct: 439 GVRFETMQFRQDGSTFPVEINARWIDLDRGHLVQAIIRDISERKAAEDQLVHQAYHDPLT 498 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN + + L +D + ++ G + + ++ + + Sbjct: 499 GLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLGHAVGDRILTTLAQRMQ 558 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAW 441 +++ + + + G E L++L + + L+ S+ + + + + Sbjct: 559 ETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQPVLIDGEEMCLTTSVGI 618 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 + + L+ ++ ++ +++ L N +R AL + Sbjct: 619 SVAPEDSIEVDQLIRFADTAMYRAKEKGRN-NFQFYTPDMNAHAGRRLQLENNLRKALQR 677 Query: 502 GDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 ++++Y QP + G + +L + + G+++P+ F+PL + + LE Sbjct: 678 QEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIGAWALEQ 737 Query: 559 LLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 + + + +VNL +N+ I ++ + ++ + + +E+TE Sbjct: 738 ACQQTVAWQKNHPELKIAVNLSARQFRNENLVDDIEQILNKTGLAARHLEMELTESLLME 797 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + + ++ + +L K G +AIDDFGTGY++ L R D +KID FV + + Sbjct: 798 DVDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMSLDNNG-- 855 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I R+I L + LS++AE VE +Q+ LL +LG QGY RP Sbjct: 856 IARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFSRPV 902 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 101/501 (20%), Positives = 198/501 (39%), Gaps = 25/501 (4%) Query: 252 TLGVGKLRYPFLNLTWA-VSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCLLY 307 L G+ F W V+T + Y ++ + + Sbjct: 330 ILSSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYVS 389 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDN 359 + S+ + + A DPLT LPN L Q + + +D+ Sbjct: 390 VFTDISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSSRTGKKGALLFVDLDH 449 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE-----TEGRL 414 + ++ G ++ L ++ + + + G E ++VL + Sbjct: 450 FKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVVLEDLDRNATEAAAIA 509 Query: 415 QHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + N + S + F G++ ++ LL Q Q+ Sbjct: 510 EQIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLLKQADISMYQAKKAGRN 569 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYD 529 L + + + + + L + +R A+++ L LY Q + + G + ++ + + Sbjct: 570 -TLRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQRMVGAEALIRWIHPE 628 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQK 587 G ++P +F+P+ + L V+ + LA +KK +VN+ Sbjct: 629 RGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSAHQFRAL 688 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + + I + LE+TE + + + + L G ++++DDFGTGY+ Sbjct: 689 DFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLDDFGTGYS 748 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LK+L D +KID FV+D+ + DA++V++I DLA ++V+AE VET+ + + Sbjct: 749 SLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVETELELDI 808 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L G + QGYL GRP P+ Sbjct: 809 LKGYGCRLYQGYLFGRPVPIE 829 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 98/463 (21%), Positives = 188/463 (40%), Gaps = 18/463 (3%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ L + V + + A DPLT LPN R Sbjct: 553 RKNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYFDPLTDLPNRRM 612 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + + L +D+ + ++ G ++ + ++++++ Sbjct: 613 LQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDD 672 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E L+L + + + L ++ + + + + F + Sbjct: 673 VVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDG 732 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++ L + E ++ + ++ L +R A ++ +L L+ Sbjct: 733 GDVKNLEKHADIALYHAKEEGKN-TFRFYLEELNSTISTRIALEQGLRYAKERQELELHY 791 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + +L D G+++P +F+PL Q L VL + Sbjct: 792 QPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQ 851 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +VNL + L + R+ + I P+ + LE+TE +N + + Sbjct: 852 WREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQ 911 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 +E+L G I+IDDFGTGY++ LK I+KID FV+D+ N+ D I RS+ D Sbjct: 912 LLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVD 971 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + VAE VE+++Q +L ++G Y+QG++ RP Sbjct: 972 LANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQAD 1014 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 662 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 115/610 (18%), Positives = 217/610 (35%), Gaps = 34/610 (5%) Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIA 205 +D + + S+ A L +LFY + R++ RR + Sbjct: 115 IYDAGTSVGKILVSRSLAPLLWKTSSVAVAALAAGLLFYTVLRILPLRAV-----RRAYS 169 Query: 206 PSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNL 265 EK+ +L V L + ++ +V V L Sbjct: 170 SLEESEKKYRSLYESMKEGVALHRINYDEYGVPVSFTIVDVNPSCQLLLGLSSEELIGKD 229 Query: 266 TWAVSTLCLLNYNQNFLQG--VETEYSLAFI---------LAVLISFSVCLLYMVRIYHR 314 + + Y L+ +S F+ +AV + +++ + Sbjct: 230 GSELFGGAVAGYFPEILRAASTGEAFSFDFVQQADKQRIHVAVFFPETGYFAFLMEDVTQ 289 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRH 366 + + A D LT LPN L EQ + L +D + ++ Sbjct: 290 RKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDRFKVINDT 349 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV--LSGPET--EGRLQHMVNILN 422 G + + L ++ ++ L ++ G E +++ L GP+ QH+++ + Sbjct: 350 MGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQHLIDSIT 409 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 S + + F + LL + ++ Sbjct: 410 SV-YPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMY-AAKEGGGKGYHFYSPEMN 467 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 + ++ + +R AL++ + L QPI + G + +L + G++ PD F+ Sbjct: 468 LKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDMFI 527 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + VL + + + R SVN+ Q N + + + Sbjct: 528 QVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCSIIR 587 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + P + LE+TE + E++ + QL + I IDDFG GY++ L++ D Sbjct: 588 ETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPID 647 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 IKID F++D+ ++ D IV +I +A L VVAE VET +Q L + G +QG Sbjct: 648 RIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQG 707 Query: 719 YLIGRPQPLA 728 + RP Sbjct: 708 FYFHRPLSEE 717 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 105/568 (18%), Positives = 211/568 (37%), Gaps = 27/568 (4%) Query: 188 RMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--LLLCTPYENDFIAGYLVP 245 R + ++ + I E R L + + + + T F + Sbjct: 543 RQLAKEKHQRLRVQELIDNIDAAESRYQLLIENSLVGIFVYQHHRYTYVNPRFAEIFGYT 602 Query: 246 VFFIIFTLGVGKLRYPFLNL--------TWAVSTLCLLNYNQNFLQGVETEYSLAFIL-A 296 I+ + +L +P L L Y L+ + ++ Sbjct: 603 PEEIVDSAPQPQLVHPDDQLFVDANNLKILGGVNANHLRYEFVGLRKTGQPIDVEILIGR 662 Query: 297 VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEA 348 + L+ + + + A DPLT L N Sbjct: 663 GISEGQPALIGSLLDITERKEAEKTIEHLAFHDPLTGLANRLLFMDRIEQAIAHAHRHHE 722 Query: 349 GKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + L +D + ++ G ++ + + L ++E + + + G E ++LSGP Sbjct: 723 SFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTVSRFGGDEFNVLLSGP 782 Query: 409 ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 E ++ + + + + N+ + M + + L+ ++ Sbjct: 783 SHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGREAITLVKNADTALYRA 842 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 ++ + +++ + +++R ++ +L ++ QP + G + + Sbjct: 843 KDLGRN-NFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQVGLQSGRITGLEGL 901 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMP 581 + G ++ P F+PL + L VL++ L T R +N+ Sbjct: 902 VRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAGFAPMRLGINVSA 961 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + + A ++++ K + P + LEITE N + + +L G I+IDD Sbjct: 962 HQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETLRRLRAVGITISIDD 1021 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTG+++ LK L AD +KID FV+++ +A I R I ++A +L V+AE VE Sbjct: 1022 FGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHGLNLKVIAEGVEN 1081 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 Q Q L + G +QG+L+ RP D Sbjct: 1082 QAQLDFLREAGCDEIQGFLVSRPLAAED 1109 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 106/466 (22%), Positives = 174/466 (37%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + Y ++ + + + + + A DPLT LPN Sbjct: 870 RKNGEIYPTWLAVSAVRNDQGKATHYVGISSDLSQLRQTEAEREHLAHYDPLTDLPNRLL 929 Query: 338 ------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 AL QA L +D + ++ G + + ++ L M+ + Sbjct: 930 LRSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSED 989 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNN-TGLDMGYGAAWGRFDGN 447 L +L G E LLVL + L ++ + + +G F + Sbjct: 990 LLARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPND 1049 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 ++ + L+ Q+ E +S + + + L N +R A+ L +Y Sbjct: 1050 GDSAEQLIQHADAAMHQAKTLGRN-TYHFYTEDLSRASNEHLELENRLRHAITANQLRVY 1108 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ + G++ P +F+PL + L VL+ Sbjct: 1109 YQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGM 1168 Query: 565 THPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VNL P L+ NIAG I ++ + LE+TE E Sbjct: 1169 RWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDV 1228 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L R+AIDDFGTGY++ LKR DI+KID FV DI + D I +I Sbjct: 1229 IKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATI 1288 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET++Q L G QGYL P P + Sbjct: 1289 IAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEE 1334 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 107/461 (23%), Positives = 200/461 (43%), Gaps = 21/461 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--- 344 EY L + + + + R ++ A DPLTLLPN R L Sbjct: 546 EYLLISAVKDIKNEVANYVATFRDITANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHA 605 Query: 345 -----EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +DN + ++ G M ++ + L ++E++ L +L G Sbjct: 606 LASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGD 665 Query: 400 ELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L + + + + + + + + F G+ ++ Sbjct: 666 EFVVILENLSELAMDAATKAELIGEKILAALNQVYPLASQEYHGAASIGVTLFAGHALSI 725 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 L+ Q QS L + ++ L +R A+D+ L L+ Q Sbjct: 726 DELMKQADIAMYQSKKSGRN-TLRFFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQ 784 Query: 512 RN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N + ++ + G+++P F+PL L VL++ L + + Sbjct: 785 LNSVGTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDE 844 Query: 570 --KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 + +VN+ QKN + +R+ I+P+ + LE+TE N E + + Sbjct: 845 RFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDIIVTM 904 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 L + G + ++DDFGTGY++ + LKRL + +KID FV+++ +++ D IVR+I +A Sbjct: 905 NALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMA 964 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ +L+V+AE VET++Q LL +G Y QGYL G+P P+ Sbjct: 965 ESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIE 1005 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 111/458 (24%), Positives = 194/458 (42%), Gaps = 21/458 (4%) Query: 291 LAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA------- 343 + + + LL + R + ++ L A D LT LPN R L Sbjct: 639 IKTPIRDMHGHVTGLLSVSRDITDRKKAEQQIELLAFFDALTGLPNRRLLLDRLQRAGAA 698 Query: 344 -PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELL 402 E + + +DN + ++ G M + + + L ++ ++ + + G E + Sbjct: 699 CQRNEKLGALLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFV 758 Query: 403 LVLSGPETEGR-----LQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 ++L G + + + + L ++ F + T+ L Sbjct: 759 VMLEGLDADTALAALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTVDEL 818 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK 514 L + Q+ A + + Q T + L + +R + + +L ++ QPI + Sbjct: 819 LKRADLAMYQAKAAGRNTQ-RFFDPDMQAQVTARSQLESDLRQGIARHELTVHLQPIVDG 877 Query: 515 --EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--K 570 G + ++ G+++P F+PL + L QVL++ + L Sbjct: 878 STRLCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPAT 937 Query: 571 KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 +VN+ Q + ++ +PQ + LE+TE + E ++ + QL Sbjct: 938 ASFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQL 997 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G A+DDFGTGY++ LKRL D++KID FV+D++T+ DA IVR+I LAK+ Sbjct: 998 KRVGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSL 1057 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L VVAE VET Q + L G + QGYL GRP PL Sbjct: 1058 DLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLE 1095 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 97/445 (21%), Positives = 178/445 (40%), Gaps = 16/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKS 351 F L ++ + R H A D LT LPN ++ + Sbjct: 401 GFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLA 460 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + ID + ++ G ++ I L ++E + + + G E +L+L+ Sbjct: 461 VAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRM 520 Query: 412 GRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 + + + ++ L + + G+ T + LL S Sbjct: 521 EDANDVTQRILKKLKEPVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKES 580 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILAR 525 V + +Q+L +R AL+ +L+LY QP N G + +L Sbjct: 581 GRD-NYHFYSSTVQEKAYEQLLEEMYLRRALENRELVLYYQPQVNIATGRLVGMEALLRW 639 Query: 526 LKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTL 584 G+++P +F+PL D VL + K +VN+ T Sbjct: 640 KHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTF 699 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 ++N+ + + +SP A+ LEITE A N ++++Y + +L G +I IDDFGT Sbjct: 700 GRENLIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGT 759 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 G+++ L + +KI F+ ++ + ++ IV+++ +AK+ L+V+AE VET +Q Sbjct: 760 GFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQ 819 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 L L QGYL + + Sbjct: 820 FEFLQGLQCDEFQGYLCSKAVTSEE 844 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 99/430 (23%), Positives = 177/430 (41%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSR 365 + + + QA D LT LPN S L +D + ++ Sbjct: 436 QRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTIND 495 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS-- 423 G + ++++ L ++E + + + G E ++L + + S Sbjct: 496 TLGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSAL 555 Query: 424 -RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + H N L + +D + + L+ Q+ +S Sbjct: 556 EQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRN-TYQFFCSGLS 614 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 +++ L ++R AL++ + LLY QP N + G + +L + G++ P F+ Sbjct: 615 NGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFM 674 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFK 598 + + L VL + T +VNL Q ++ G I R+ Sbjct: 675 SVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPDLTGMIARILD 734 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + PQ + LEITE A + E + +++L G +I++DDFGTGY++ L++ + Sbjct: 735 ETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLN 794 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D+ N+ DA IV ++ LA+ +L+VVAE VE +Q L L + QG Sbjct: 795 TLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQG 854 Query: 719 YLIGRPQPLA 728 Y+ RP Sbjct: 855 YIFNRPLEAD 864 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 660 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 124/756 (16%), Positives = 266/756 (35%), Gaps = 54/756 (7%) Query: 11 IKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVP---- 66 + I+ + F + ++ H + L+ +P V + F W P Sbjct: 67 LGIWAMHFIGMLAF-----HLNDDVTYHLGIVLLSIVPAVVASGLAF---WIISHPETRP 118 Query: 67 --VLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQ- 123 ++ G F ++ + ++ M + + + + Sbjct: 119 IQLVFGAFLISVGVVSMHYIGMEAMQMNAILTYDPVMWVASAIVAFVASLVGLYILFYIP 178 Query: 124 ---RLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 R W L + + I ++ + T A + + S A +I Sbjct: 179 NVSRFHWRRLASSVLIGVAVS-GMHYVGMGAARFTPMEGAAKPVSDYAVDSTLLAYVIAA 237 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL----------- 229 + M +S A + A S E + ++ A+ ++++ Sbjct: 238 SVMTLFILMYISLRTA----SQLEAQSEELELKFESIIESASDAIIVADHNRTILQWNQG 293 Query: 230 ---LCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVE 286 L ++ + +V + F + + + L+ Sbjct: 294 ATDLFGYTTDEMVGQSIVAIIPERFREAHERGMRRYEAT--GEKRVIGQTVELIGLRKDG 351 Query: 287 TEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE 345 E + L + ++R + + + + DPLT LPN R + Sbjct: 352 VEVPIEMSLGTWKTDKGIFFSSIIRDISERKRIEAQINDLVYLDPLTGLPNRRLFSDRLD 411 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 Q + + +DN + ++ +G + ++ + + +Q+ + L +L G Sbjct: 412 ALLGQSQSEQFALYYIDLDNFKVINDRFGHSIGDQFLKQVTTRIQSTIQKTDTLARLGGD 471 Query: 400 ELLLVLSGPETEGRLQHMVNILN--SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 E +++ ++ ++N N + G + +T + L+ Sbjct: 472 EFIILSPDTKSNLAAHRAQELINVLHPPFELENEEVFTGASIGISLHPSDGDTAEELIKN 531 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE-- 515 ++ A ++ +++ L +R + +G+ ++ QP E Sbjct: 532 ADIAMYRAKADGKN-GYQFFTNELNESVSRRSNLSMALRKGIGRGEFTVHYQPQIQLETE 590 Query: 516 -GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGP 573 G + ++ + G+++P +F+P+ + R VL + Sbjct: 591 MVIGMEALVRWNHPELGMISPGEFIPIAEETGSIHRLGEFVLNEACRQNKAWQDASIPPF 650 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R +VN+ + QK++ + R + Q + LE+TE +A+ ++ + +L Sbjct: 651 RVAVNISAVQFAQKDLPEVVSRALAASGLEAQYLELELTESV-IQSADRAIETMHELVAL 709 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++IDDFGTGY++ LK D +KID F K+I ++ DA +V++I +A L+ Sbjct: 710 GVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTKNIESDEKDAALVKTIIRMAHELDLN 769 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET+ Q A L QGY RP P + Sbjct: 770 VIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAEE 805 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 105/439 (23%), Positives = 179/439 (40%), Gaps = 15/439 (3%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 L+ V + + A D LT L N AL + + + + + Sbjct: 572 LVGTVNDVTDQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVD 631 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G + +R + L ++ L +L G E LLVL G + + Sbjct: 632 LDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVLPGADERAASEV 691 Query: 417 MVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 IL S + + L + + E L+ Q+ A Sbjct: 692 AACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRN-TF 750 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 ++ +++ L +R A +G+++L+ QP + G + ++ G Sbjct: 751 QLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLG 810 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 +++P +F+PL + L + + +VNL Q N Sbjct: 811 MVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFT 870 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + + PQ + LE+TE + E + + +L G +++IDDFGTGY++ Sbjct: 871 AVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLN 930 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D++KID FV+D+ T+ DA IVR+I L K +L ++AE VETQ Q LH Sbjct: 931 YLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHA 990 Query: 711 LGVQYLQGYLIGRPQPLAD 729 GV ++QGY RP P D Sbjct: 991 AGVDFIQGYYFSRPLPAED 1009 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 102/470 (21%), Positives = 184/470 (39%), Gaps = 25/470 (5%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + AL DPLT LPN R Sbjct: 557 RKNGEIYPEWLTISAVRGQHGEITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRL 616 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + Q + + +DN + ++ G + +R + L ++ N+ Sbjct: 617 LNERLSKALTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSND 676 Query: 392 KLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGR 443 + +L G E +++L + +++H+ + + + Sbjct: 677 TVSRLGGDEFVILLEELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIP 736 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F ET++ LL ++ A + + + + L +R A + Sbjct: 737 FMDATETIESLLKSADMAMYKAKAAGKNRLF-FFDPAMQTEVEARAALERDLRQAQREKQ 795 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +LY QP + G + ++ G++ P +F + + L VLE K Sbjct: 796 FVLYLQPQVDQSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACK 855 Query: 562 WLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 L D ++N+ L + + R + LEITE + Sbjct: 856 QLVIWQKNPDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLED 915 Query: 620 AESSMYNIEQLH-KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 + ++ ++ L + G +++DDFGTGY++ LK+L D IKID FVKDI N DA Sbjct: 916 IDGTIERMQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAA 975 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I ++ L ++ SL+V+AE VET +Q+ L G QGYL GRP P+ Sbjct: 976 IAEAVIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPID 1025 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 110/570 (19%), Positives = 207/570 (36%), Gaps = 31/570 (5%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL------LLLCTPYENDFI 239 + R+ + A++ + + L + + C FI Sbjct: 91 MLRIFAARASAELERTKAEQARREQLHFLQVLIDSIPHPIFYKDADRRYIGCNAALESFI 150 Query: 240 AGYLVPVF----FIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFIL 295 + F I G ++ A + +Y+ + + + F Sbjct: 151 GRTREEIIGKTVFDIGAEGRARICDAVDRKLLANG--GVESYDSTMIHTDGSIRDIIFSK 208 Query: 296 AVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------P 344 V ++ + + A D LT LPN L Sbjct: 209 TVFGNTDGSIGGIVGTILDITERKRAEEAIQQLAYFDALTGLPNRTLLRDRVSQLLSQAR 268 Query: 345 EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLV 404 + G L +D + ++ G + ++ + ++E++ + +L E +++ Sbjct: 269 REGGGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRESDTVARLGSDEFVVI 328 Query: 405 LSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWL 461 L G E + +V + R I + + + + LL Sbjct: 329 LPGVGHEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTDGSSADILLKNADMA 388 Query: 462 AEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP---IRNKEGEG 518 ++ ++ + +++ L ++R AL++ + LL+ QP I + G Sbjct: 389 MHKAKEFGGD-GYQFYSSELNHRAMERLTLETSLRRALERREFLLHYQPLLGIGSGRIVG 447 Query: 519 YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSV 577 + +L + G+++P +F+PL + L VL S + L SV Sbjct: 448 VEALLRWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSV 507 Query: 578 NLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRI 637 N+ + + + P+ + LE+TE +E++ + +L + G + Sbjct: 508 NVSARQFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSL 567 Query: 638 AIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAE 697 AIDDFGTGY++ LK D +KID FVK++ + +A I +I LA +L VVAE Sbjct: 568 AIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAE 627 Query: 698 FVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 VET +Q A L L +QGY I RP P Sbjct: 628 GVETAEQLAFLAALRCDVVQGYHIARPLPP 657 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 92/439 (20%), Positives = 181/439 (41%), Gaps = 18/439 (4%) Query: 308 MVRIYHRSEW--LNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRI 357 + R D LT LPN + + + + + Sbjct: 440 IEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLFIDL 499 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHM 417 D+ + ++ G + + + R L + + + +L G E ++L + + Sbjct: 500 DHFKKINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIILDQLNNIENVILI 559 Query: 418 VNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 +N + + L + + G+ + + LL ++ Sbjct: 560 AQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRD-NY 618 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGG 531 ++ + ++ + L +R A+D+ L++Y QP ++ G + ++ + G Sbjct: 619 RFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENG 678 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIA 590 +++P F+P+ + L VL R SVN+ QK++ Sbjct: 679 MISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLV 738 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 + R+ + +SP+ + LEITE ++ + ++ + +LH G +++IDDFGTGY++ Sbjct: 739 PMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLA 798 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LK+ +KID FV+D++ + DA I ++ DLA+ +L+V+AE +E Q Q L Sbjct: 799 YLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLD 858 Query: 711 LGVQYLQGYLIGRPQPLAD 729 G Y QGYL RP P + Sbjct: 859 RGCGYGQGYLFSRPIPAHE 877 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 104/430 (24%), Positives = 177/430 (41%), Gaps = 16/430 (3%) Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + + QA D LT LPN ++ +Q L +D + ++ Sbjct: 424 QKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVNDT 483 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---S 423 G + ++ + L ++ + + + G E L+ + + + + + S Sbjct: 484 LGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKLS 543 Query: 424 RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSG 483 +N L + + E Q LL ++ E + Sbjct: 544 IPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRN-NFQVFAEEMHR 602 Query: 484 QTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLP 540 + Q+ L +R AL + + LLY QP + G + ++ G + PD+F+P Sbjct: 603 EALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIP 662 Query: 541 LIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKR 599 L + L A VL++ + + R +VNL Q + I++ + Sbjct: 663 LAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLET 722 Query: 600 YHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADI 659 I PQ + LEITE A + E ++ +++L + G I IDDFGTGY++ LK + Sbjct: 723 TEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNT 782 Query: 660 IKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 +KID FV+DIV N+ DA I ++I L++ L VVAE VET QQ + L + QGY Sbjct: 783 LKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGY 842 Query: 720 LIGRPQPLAD 729 P P + Sbjct: 843 YFCPPVPAIE 852 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 101/453 (22%), Positives = 180/453 (39%), Gaps = 21/453 (4%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------E 347 + + +V + + H A DPLT LPN R EQ Sbjct: 471 RDDLGTVRRAIEVVTDITDKKNREQEIHRLAFYDPLTRLPNRRLFFDRLEQAFSASARSG 530 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +DN + ++ G + + L ++ N+ + + G E +++L+ Sbjct: 531 QHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERLQEAVRANDTISRQGGDEFMVLLNN 590 Query: 408 PETEGRLQ-----HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLS 459 E + + + + + +G F G+ L + Sbjct: 591 LSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTPADELFKRAD 650 Query: 460 WLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGE 517 Q+ + + + + L+ +R A+ QG L+ QP + Sbjct: 651 AAMYQAKHAGRNQV-RFFDPEMQAELEQASALVVDLRQAIWQGQFQLHYQPQTANDGRII 709 Query: 518 GYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC--DKKGPRF 575 G + +L + G ++P +F+PL + NL VLE LA + Sbjct: 710 GAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWADLPAAGNCKL 769 Query: 576 SVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGF 635 +VN+ Q I R+ P+ + LE+TE + ++ +++L G Sbjct: 770 AVNVSARQFRQPEFVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQELRDLGI 829 Query: 636 RIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV 695 ++DDFGTGY++ +LKRL + +KID FV+D+ ++ D IV +I + + + V+ Sbjct: 830 GFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQVI 889 Query: 696 AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 AE VET++Q A L + G QGYL RP P A Sbjct: 890 AEGVETKEQLATLARYGCDAYQGYLFSRPVPAA 922 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 114/511 (22%), Positives = 205/511 (40%), Gaps = 21/511 (4%) Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 Y + + G + +F + V L + W L ++ E S++ Sbjct: 560 YPPELVIGRVSRIFRDNTSWSVAMLDGLARHGHWQGEMLDRRRSHE----WYPAELSISA 615 Query: 294 ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF----RALEQAPEQ--- 346 + + + + R A DPLT LPN LE +Q Sbjct: 616 V-RDDAGAITNYVGVFADITVRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIAS 674 Query: 347 -EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ +G +R L ++ ++ +L G E L++ Sbjct: 675 SGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLV 734 Query: 406 SGPETEGRLQHMVN---ILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLA 462 S ++ L + + ++ + L + + + + LL Sbjct: 735 SHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAM 794 Query: 463 EQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGY 519 ++ ++ Q +++ L +R AL++G+ L+ QPI E Sbjct: 795 YRAKEAGKN-TYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEAL 853 Query: 520 DEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVN 578 + +L + G+++P +F+PL + L V+ + LA C PR ++N Sbjct: 854 EVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAIN 913 Query: 579 LMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIA 638 L Q+ + ++ I+ + LE+TE N ++ + +L G R++ Sbjct: 914 LSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLS 973 Query: 639 IDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEF 698 IDDFGTGY++ LKR D +KID F++ + + +A I +I +A+ S SVVAE Sbjct: 974 IDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEG 1033 Query: 699 VETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VET+ Q A L G Q LQGYL RP P A+ Sbjct: 1034 VETEAQAAFLCAKGCQLLQGYLFSRPLPAAE 1064 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 104/507 (20%), Positives = 210/507 (41%), Gaps = 28/507 (5%) Query: 238 FIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAV 297 + L F+ +G + Y W + + + T++ + Sbjct: 828 LASEKLEESFYSAMWDSIGVMGY------WQGEVINQRKNGEIY-----TQWLSISTIKD 876 Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAG 349 + ++ + R + DPLT LPN L + Sbjct: 877 ADGKISQHIGIISDISERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTA 936 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D +F++ G + ++ + + M+ + + + G E +L+L + Sbjct: 937 VTLMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTD 996 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 EG H+ L ++ +++ + + + + E+ + L ++ Sbjct: 997 AEGAA-HVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAK 1055 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEIL 523 + Q +LL + +R+A++ + LLY QP + + G + ++ Sbjct: 1056 YEGRN-NFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALI 1114 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPL 582 + G+++P F+P+ + L A VL + +K LA+ G +VNL + Sbjct: 1115 RWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVV 1174 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q + G + ++ + + P + LE+TE A ++E ++ + QL+ G R++IDDF Sbjct: 1175 QFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDF 1234 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+ + D +KID FV+ I ++ DA I+ +I +AK+ S +AE VET Sbjct: 1235 GTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETL 1294 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L +QGY +P P + Sbjct: 1295 EQLNFLIANSCDEIQGYYFSKPLPSTE 1321 Score = 43.1 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 15/184 (8%), Positives = 46/184 (25%), Gaps = 11/184 (5%) Query: 142 LVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWR 201 + G+ + + + F + L++L + L F ++ S A+ ++ Sbjct: 298 VGGTKWTLFFQTTPAFETRILPYGKPMLVALLGSTLTILSAFLAWF-LLSSRQLAESRYQ 356 Query: 202 RDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYP 261 + + A ++ + + + + L V T Sbjct: 357 KLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINNVTKHPEFNTNL 416 Query: 262 FLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRR 321 ++ + + + + L ++R + R Sbjct: 417 ISDIP--------TKDEWQYRRKDGSRFIAEVNCRKLD--KNYYFTIIRDLTERKLAENR 466 Query: 322 WHLQ 325 Sbjct: 467 ILHL 470 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 91/466 (19%), Positives = 184/466 (39%), Gaps = 20/466 (4%) Query: 283 QGVETEYSLAFILAVLISFSV----CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + + +A + S + ++ + + QA D LT L N Sbjct: 342 HKDGSMFLNELYIAPVSDTSGGAVGHFVGVLYDVTQIKRYQEDLEHQANYDTLTGLANRN 401 Query: 339 ALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L + + S + +DN + ++ G I ++ L +++ Sbjct: 402 LLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDG 461 Query: 391 EKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGN 447 + + ++ G E +L+L+ ++ + + + + + RF + Sbjct: 462 DTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPED 521 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E + LL ++ + + ++ + +++ L + + AL +L L Sbjct: 522 GEDSESLLANADTAMYRAKSSGRN-NFQFYTKEMNATSGERLSLESDLWHALKNDELFLV 580 Query: 508 AQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ G++ P F+P+ L + VLE+ + Sbjct: 581 YQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNL 640 Query: 565 THPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + R ++NL L +N + + + + P + LE+TE N E Sbjct: 641 QLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDV 700 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L+K G ++++DDFGTG+++ LKR D +KID F+ + ++ DA+I ++I Sbjct: 701 VVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTI 760 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA + V+AE VE + + L K G QGY I RP D Sbjct: 761 IALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDD 806 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 93/444 (20%), Positives = 179/444 (40%), Gaps = 15/444 (3%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGK 350 + R R A D LT LPN + + Sbjct: 371 AGAIRYFIGSFRDITEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQA 430 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G ++ + L ++ + + +L G E ++L Sbjct: 431 ALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISA 490 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + I + + +G F + + LL Q+ A Sbjct: 491 ANDASMVADKILASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKA 550 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILA 524 + ++ + ++ L +R A+++G ++ QP +N G++ ++ Sbjct: 551 AGKGR-FNFYSAEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVR 609 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL 584 G+++P F+PL + +L R D+ V+ + +VNL + Sbjct: 610 WQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNF 669 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + ++ ++ ++ + + + LEITE +++L G ++AIDDFGT Sbjct: 670 SRDDLPEQVRQVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGT 729 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL + +KID FV+DI ++ D M+V SI +A + L VVAE +E + Q Sbjct: 730 GYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQ 789 Query: 705 QALLHKLGVQYLQGYLIGRPQPLA 728 A+L +QGYLI +P P Sbjct: 790 LAILLSQECDEIQGYLIAKPMPAE 813 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 134/775 (17%), Positives = 263/775 (33%), Gaps = 60/775 (7%) Query: 10 NIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYI---FLAWMPLCVMLSILFIFGWRGVVP 66 ++ L + ++ ++ L I+H + L + L L F R + P Sbjct: 51 HLGQIIWLLALFALFHGINEWLDLLNIVHGASPLLDALRGLILPFSFLPLLEFARRLLQP 110 Query: 67 VLCGMFCTNLWNFHLSFLQTAVMLGSQTF----------------VVLCACAILRWQLGT 110 G + + + L SQ +L +LR+ Sbjct: 111 W-LGRWASPWLLIVPIAVVVLTALISQLDWLAISVASRYAIGLPGALLAGIGLLRYSRTD 169 Query: 111 RWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKIST-----FFGDADAIFT 165 + L L L+ D PL S + Sbjct: 170 EPWADHGRVRAALVVVGLAL---AIYGLLTGLIVPPLDIPLARSLNSQWFLEQTGVPVQL 226 Query: 166 VVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSV 225 L +L I+ +L + H ++ + + + + AA ++ Sbjct: 227 FRALCALTAGAAIWYVLHTFEIGRERQLHQMASETQQALHQARQLGQEQQMILDAAADAI 286 Query: 226 LLL------LLCTPYENDFIA-----GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL 274 + L P + +I G+ W + Sbjct: 287 IGLDNRGRVTFSNPAATALFGYSAEELQGEDLHALIHLCKEGEAHPREECGLWRLLRFGG 346 Query: 275 LNYN--QNFLQGVETEYSLAFILAVLISFSVCLLY---MVRIYHRSEWLNRRWHLQALTD 329 ++ + T + + + ++ R + +A D Sbjct: 347 QYHSGHETLRHKDGTPLPVEMNGSAIDDEKGVVIGAVLTFRDISERLSYEQELERRAHYD 406 Query: 330 PLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT L N L+ + L +D+ + ++ G + +I + Sbjct: 407 ELTGLANRVLLKARLQQTTAQAHRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQ 466 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYG 438 L +++E + + + G E ++VLS P+ + L R + + L Sbjct: 467 RLQTVVREADTVARHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTAS 526 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F + + LL ++ L E ++ +K++ +L+ +R A Sbjct: 527 VGVSLFPRDGTDVDTLLRNADAAMYRAKHLGRN-NLQFYSEEMNLSLSKRLRMLSQLRQA 585 Query: 499 LDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ +L L+ QP + G + ++ + G+++P +F+PL + L V Sbjct: 586 VERNELCLHYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWV 645 Query: 556 LESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + R SVNL + I + ++ ++P+ + LE+TE Sbjct: 646 LREACRQGVAWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTET 705 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 +N + S+ + + G R+A+DDFGTGY++ L+R D+IKID FV D + N Sbjct: 706 ALIANPQQSVQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNP 765 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A IVR++ +A+ +AE ET + L + G +QGY I RP P + Sbjct: 766 GNAAIVRTVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGE 820 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 121/575 (21%), Positives = 216/575 (37%), Gaps = 39/575 (6%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLL--------------LLCTPYE 235 I + A + + E R T+ + ++L+ + Sbjct: 324 ITNLRQAISDREQAFSDIQISEARLRTIFDASPDALLISDAQGAITMANSRVEEVLGYMA 383 Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF-I 294 D I + + + R ++ L L L+ +E + + Sbjct: 384 EDLIGQSIEALVPKSVNSAHSEHRSAYIEAPD--RRLMLGGRTIKALRKDGSECEVEINL 441 Query: 295 LAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQ 346 V V + +R + + D LT LPN L Sbjct: 442 SRVDTDQGVMIASALRDISERRRAEGKIAELSFFDHLTGLPNRTLLMDRMKLAMTASYRD 501 Query: 347 EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS 406 + + +DN + ++ G + +R I L+ ++E++ + +L G E L++L Sbjct: 502 GKHCALLFIDLDNFKALNETLGHEIGDQLLRDIAPRLVASVREDDTVARLGGDEFLVLLV 561 Query: 407 GP-ETEGRLQHMVNIL-------NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQL 458 TE + V + S+ NN F G+ LL Q Sbjct: 562 DLARTESEAANQVEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFGHVV-ADDLLKQS 620 Query: 459 SWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEG 516 ++ A ++ + + K+ + +R L + LL+ QP N Sbjct: 621 DLAMYKAKAEGGA-SIHFFDPKMEEAVIKRAKIEADLRQGLIKKQFLLHYQPQIFSNGRM 679 Query: 517 EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPR 574 G + ++ G++ P F+PL + L + VLE+ K LA + Sbjct: 680 TGVEALVRWQHPVRGLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLT 739 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 +VN+ Q I + + +P+ + LE+TE N + + + L G Sbjct: 740 VAVNVSVQQFHQPEFVDHIQEVIRVTGANPERLKLELTESMLAENVQDIIKKMFALKADG 799 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++DDFGTGY++ LK+L D +KID FV+D++T+ DA I ++I +LA++ LSV Sbjct: 800 IGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSV 859 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VET+ Q+ L G QGY RP P+ + Sbjct: 860 IAEGVETEAQRNFLETSGCHSCQGYFFSRPLPIEE 894 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 97/565 (17%), Positives = 196/565 (34%), Gaps = 36/565 (6%) Query: 186 LTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP 245 R I A + A A + L + T + + Sbjct: 139 SLRNITERREADAYKAQLAAIVESSND--------AIIVQDLNGIITSWNAGAEGLFGYR 190 Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ-------GVETEYSLAFILAVL 298 +I + + +CL+ + ++ ++ + Sbjct: 191 ASEVIGSSVEILIPPDLRE--EEGDIMCLIKSGRRADHFETVRWGKGRKPIDVSVTISAM 248 Query: 299 ISFSVCLLY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QE 347 + ++ +VR + + R A D LT LPN L Sbjct: 249 KDRAGNIIGASKIVRDITQRKESQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYS 308 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + + ID + ++ G + ++++ + + +++ + + ++ G E +++LS Sbjct: 309 IRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADTVSRVGGDEFVVLLSR 368 Query: 408 PETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ET L S+ L + + N + L Sbjct: 369 IETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNGKDASSLTRNADAAMYS 428 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDE 521 + E ++ +++ L + +R AL + ++ QP G + Sbjct: 429 AKGQGRNR-YQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQPQIELATGRVIGVEA 487 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLM 580 ++ + G+++P F+P+ L +L +VN+ Sbjct: 488 LMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQWHEHQGFQGTIAVNVS 547 Query: 581 PLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAID 640 + Q + ++R+ P+ + LE+TE ES + + L G ++AID Sbjct: 548 AVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVVQKMGILESHGIKLAID 607 Query: 641 DFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE 700 DFGTGY++ L++ D +KID FV+D+ + I+R+I + ++ L V+AE VE Sbjct: 608 DFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVE 667 Query: 701 TQQQQALLHKLGVQYLQGYLIGRPQ 725 T+ Q L + QGYL RP Sbjct: 668 TEAQARFLQDIECTESQGYLYARPM 692 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 100/428 (23%), Positives = 186/428 (43%), Gaps = 17/428 (3%) Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP-----E---QEAGKSFCCLRIDNLEFMSRHYG 368 + H A D LT LPN + + + L +D + ++ G Sbjct: 1045 RAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLG 1104 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 + +++ ++ ++ N+ + +L G E ++L E+ + + S+ Sbjct: 1105 HEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKV 1164 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 ++ + + + G+ E + L+ ++ + E+ + Sbjct: 1165 FAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKEQG--NSYQFYEKGMETAA 1222 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 K++ L +R AL+Q +L LY QP N E + ++ + G++ P +F+PL Sbjct: 1223 VKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLA 1282 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L A +L + + GP +VN+ L ++++ +I+ + K Sbjct: 1283 EETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETG 1342 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P+ + LEITE A +++ +L + G + AIDDFGTGY++ LK DI+K Sbjct: 1343 LPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVDILK 1402 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F+ D+V+N DA I++ I LA + L VVAE VETQ Q+ L QG+ + Sbjct: 1403 IDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYL 1462 Query: 722 GRPQPLAD 729 P A+ Sbjct: 1463 SEPLSAAE 1470 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 102/499 (20%), Positives = 197/499 (39%), Gaps = 22/499 (4%) Query: 246 VFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 V + L P + + +Y + A + + Sbjct: 491 VVQLFDQESGAPLPSPVEQCLQDREVYGV-RESAALRHRSGRDYGVQISAAPIAGRDGRV 549 Query: 306 LY---MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCC 354 L + + + L ++ A D LT LPN + + Sbjct: 550 LGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDRVHQACQSGRRHGRRFAVIF 609 Query: 355 LRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR- 413 + +D+ + ++ G + ++++ + L ++ ++ + +L G E +++LS + Sbjct: 610 MDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICRLGGDEFVVLLSDLDDVEVD 669 Query: 414 -LQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHH 469 + + + ++ T +++G F G+ E L+ + +S Sbjct: 670 GVAEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPGDGEDPDTLMKRADAAMYRSKREG 729 Query: 470 HVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARL 526 + V + ++ L +R AL G +++ QP+ + + +L Sbjct: 730 RNR-YHFFSKAVDDAASARLQLEADMRRALAAGQFIVHYQPVVHGRTRDAVAVEALLRWD 788 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLL 585 + G+ +P F+P+ + L VL + L G +VN+ P+ L Sbjct: 789 RAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWSGTALGGISVAVNVSPVQLA 848 Query: 586 QKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTG 645 Q + + + + + EITE + E+++ + +L G RIAIDDFGTG Sbjct: 849 QADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEMLRRLKGLGVRIAIDDFGTG 908 Query: 646 YANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQ 705 Y++ LKR D +KID FV+D+ + D +VR+I +A++ L VVAE VET+ Q Sbjct: 909 YSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMARSLRLHVVAEGVETEAQA 968 Query: 706 ALLHKLGVQYLQGYLIGRP 724 A+L + QGYL RP Sbjct: 969 AILAAMECPAFQGYLFARP 987 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 108/589 (18%), Positives = 219/589 (37%), Gaps = 29/589 (4%) Query: 168 DLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL 227 + L V+I ++ + + R + Q + + + ++ Sbjct: 360 AYVVLGLFVVIGAVISWLVRRQVRQMFLLQRDKELILNAAGDGIVGVDRTGRASFVNPAA 419 Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLG--VGKLRYPFLNLTWAVSTLCLLNYNQNFLQGV 285 + DF+ Y+V ++ G V + +P LC+ + F + Sbjct: 420 ARMLGYDAEDFLRRYVVETIPVVLANGEHVMEQDHPISQTRQLEQGLCVRSDLDAFRRRD 479 Query: 286 ETEYSLAFILAVLISFSVCL---LYMVRIYHRSEWLNRRWH-------LQALTDPLTLLP 335 T S+ ++ LI + + + + R + R + D LT LP Sbjct: 480 GTIISVEYVATPLIGSAGQHEGAVLIFKDLTRQQQAEERLEEKKQLLDHMSNHDSLTGLP 539 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R + + S + +D + ++ G + + S+ R + + Sbjct: 540 NRRLFQDRLYHAIERARRSSSEMSVLFIDLDRFKKINDSLGHELGDKLLISVARRMQSHL 599 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRF 444 + ++ L +L G E +++L + L S + L + R+ Sbjct: 600 RRSDTLARLGGDEFVVILEESSHSHFAAVIARNLLNELSEAFDVESHRLFVTASIGISRY 659 Query: 445 DGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDL 504 + E + L+ + + ++G+ + + +R AL Sbjct: 660 PYDAEDVVGLMSSADAAMYHAKSRGRN-NFQFYAPEMNGRAQDFLEMETQLRDALALEQF 718 Query: 505 LLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 +Y QP + G + +L + G++ P F+ L + VL + + Sbjct: 719 EVYYQPQYDMRDQTLVGAEALLRWNHPERGMVPPGDFIALAEETGAIVPIGEWVLMQVCR 778 Query: 562 WLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 + R +VN+ N++ + ++ ++ + + + LEITE + Sbjct: 779 QNRQWMDEGLTPVRVAVNISIAQFR-SNLSQTLEQVLEQSGMPAELLELEITESMLMEDE 837 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 E ++ + +L + G I+IDDFGTGY++ L++L D +KID F+ +V N DA I Sbjct: 838 EETITLLNELKEKGLHISIDDFGTGYSSLSYLRKLPVDKLKIDRSFIAHVVHNQSDAAIT 897 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 SI L + L ++AE VE ++Q+ L + QG+L RP D Sbjct: 898 GSIIALGQNMDLRILAEGVEHEEQRDFLLQHRCYIAQGFLYARPMTAED 946 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 101/463 (21%), Positives = 189/463 (40%), Gaps = 25/463 (5%) Query: 290 SLAFILAVLISFSVCLLYMVRIYH----RSEWLNRRWHLQALTDPLTLLPNFRALEQAP- 344 LAF + L + + L + A D LT LPN R L Sbjct: 118 ELAFQSKEKAKRAAELAIVNQDLTFQSKEKAKLAEELNDLAFYDTLTGLPNRRLLIDRLH 177 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 Q + + +D+ + ++ G + + + L +++ + + +L Sbjct: 178 HALASNVRQGCESAVMFIDLDHFKDINDTLGHEVGDLLLIQTAQRLESCLRKGDTVARLG 237 Query: 398 GSELLLVLSGPE-----TEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQE 449 G E +L+L + + + + + + + + FD Sbjct: 238 GDEFMLILENLDENPIEAATKAKAIADKILAELNKPYQLDMHKCHSTVSIGAVFFDHQGN 297 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 T + L+ Q Q+ L + + ++ L N +R A+++ LY Q Sbjct: 298 TAEDLIKQADIAMYQAKQAGGNL-IRFFNPKMQESINARITLENELRIAIEKSQFHLYYQ 356 Query: 510 PIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHP 567 + G + ++ + G++ P F+P+ + L V+E+ + Sbjct: 357 IQMDSDNRVLGAEALIRWTNPEHGLVLPATFIPIAEETGLILSIGKWVIETACAQIKVWQ 416 Query: 568 --CDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + +VN+ QK+ ++ +R+ I + LE+TE + E ++ Sbjct: 417 KKSQTRDLTLAVNVSAKQFRQKDFVDQVQSAVQRHAIPGNLLKLELTESLLQYDTEVTIA 476 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ L+K G + ++DDFGTGY++ + LKRL D KID FV+DI T+ D IV++I Sbjct: 477 MMKALNKIGVQFSLDDFGTGYSSLQYLKRLPLDQFKIDQSFVRDIATDNNDKAIVKAIIA 536 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+ + V+AE VET++QQ LL G QGYL +P P+ Sbjct: 537 MAQILDIDVIAEGVETEEQQQLLLGKGCTLYQGYLFSKPIPID 579 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 98/516 (18%), Positives = 197/516 (38%), Gaps = 19/516 (3%) Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCL-LNYNQNFLQGVETEYS 290 A + P F + + + ++ T + + + TE Sbjct: 169 LYRILGLDAAHAPPTFERLLQAVPADEQPLLVQSFTSLRTEGVPFSLEHRLVHADGTERC 228 Query: 291 LAFILAV--LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ-- 346 + + ++ L +V+ + R A D LT LPN L EQ Sbjct: 229 VLHQAESGRDPNHAIILRGIVQDITERKMQQGRIEYLANHDALTGLPNRNLLSDRMEQAM 288 Query: 347 ------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE 400 + L +D + ++ +G + +R + L +++ + + +L G E Sbjct: 289 SQARRTGQLVAVMVLDLDRFKHINDSFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDE 348 Query: 401 LLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 +++L T+ + + + L + + + LL Sbjct: 349 FVVMLVNLATQADADVIARKILDTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKT 408 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---K 514 + H + + +Q +L N + A+ +L LY QP + Sbjct: 409 ADAALYAAKEHGRN-CYRFYTRELGARVEEQTILENALHQAVANHELELYYQPKVDLKTG 467 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGP 573 + G + ++ + G++ PD+F+P+ L VL + + Sbjct: 468 QISGVEALIRWRRPGIGVIPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPI 527 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 R +VNL Q+++A + + ++P ++ LE+TE + + + + +L Sbjct: 528 RIAVNLSARQFRQQDVAAMVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKAL 587 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G +++DDFGTGY++ LK L D++KID F+ D+ T+ A + RSI +A++ + Sbjct: 588 GVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHME 647 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 VAE VET+ Q + L++ +QGY P + Sbjct: 648 TVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVTGDE 683 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 91/465 (19%), Positives = 180/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y + + + + + + S+ + A D LT LPN Sbjct: 266 RKNGEIYPKRLTINAVRNQAGEVENYIGIFSDISESKATELKLERLAYYDALTQLPNRML 325 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + +D + ++ G ++ + + L ++ + Sbjct: 326 FHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAAD 385 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + ++ G E ++L+ + + + + I + +G + N Sbjct: 386 TVARMGGDEFTVILADISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALYPDNG 445 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++ L ++ E ++ T++++ L + + A++ L +Y Sbjct: 446 NDVETLTKNADMAMYRAKESGRG-NYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYY 504 Query: 509 QPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + G + ++ + DG ++ P +F+P+ + L V+ + A Sbjct: 505 QPKLNMQSGIMVGMEALVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCAR 564 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R +VNL + I + + + +EITE + E+++ Sbjct: 565 WVRETGMNLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAI 624 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +EQ+ + G IA+DDFGTGY++ LK+ +K+D FVKDI + D IV +I Sbjct: 625 ATLEQISRLGIHIAMDDFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAIL 684 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LAK +L VVAE VETQ+Q + L + QGY +P D Sbjct: 685 SLAKVLNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPLSAVD 729 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 657 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 98/465 (21%), Positives = 188/465 (40%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y L ++ + + + + + + QA D LT LPN + Sbjct: 434 RKNGEVYPLNVSISRCTNSAGIPSHYVAIFHDISEIKRSEEKLQHQAYHDALTNLPNRKL 493 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + L IDN ++++ G ++ I LL ++ + Sbjct: 494 FHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQED 553 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 +L G E ++++ E + + + + + + F + Sbjct: 554 TTARLGGDEFIILMPEIEDPHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDA 613 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 +T + L+ ++ + +++ L + AL + + +L+ Sbjct: 614 DTPEDLIKNADIAMYRAKEAGKN-GYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFY 672 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + E G + ++ K DG ++ PD+F+P+ + L + D VL++ + Sbjct: 673 QPQVDLESEHVIGAEALIRWQKPDGQLVYPDEFIPIAEECGLITQIDHWVLKAACRQANK 732 Query: 566 HPCD-KKGPRFSVNLMPLTL-LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + + SVNL + + R+ + + + + + LE+TE S+ ES+ Sbjct: 733 WREQSGRNFKMSVNLSSEQFAKDQELVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESA 792 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + QL G IAIDDFGTGY++ +K A +KID FVKDI ++ D I SI Sbjct: 793 IAIMTQLTALGVSIAIDDFGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASI 852 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 L + ++ V+AE VE Q Q L + Q +QGY G+P Sbjct: 853 ISLGRNLNMEVIAEGVEEQTQIDFLKQHRCQQVQGYFYGKPCAAE 897 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 110/551 (19%), Positives = 216/551 (39%), Gaps = 21/551 (3%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGK 257 + R + + + A ++ A ++ + E V + Sbjct: 771 RMEARLLQAATVFDSSAEGITITAPDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQSGFQ 830 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHR 314 R +L++ A+ T + + + ++ + + + Sbjct: 831 DRRFYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAVKDAQGKVAHYVGVFSDITE 890 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRH 366 + + QA DPLT LPN L E G + + +D + ++ Sbjct: 891 LRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNINDT 950 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---- 422 G + + + L LM+E++ + +L G E L+V+ + H+ + Sbjct: 951 LGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQ 1010 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + +G F + + L+ ++ + + ++ Sbjct: 1011 ASPVTVE-HEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGRN-TYEFFTKDLT 1068 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFL 539 + ++ + +R A+++G+L +Y QP + + G + ++ L+ G++ P +F+ Sbjct: 1069 QTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRWLRPQQGLVLPGEFI 1128 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFK 598 L + L V + AT P SVN+ + + I R + Sbjct: 1129 KLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLE 1188 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 + + + LEITE S+AE+S+ ++ L G + IDDFGTGY++ LKRL + Sbjct: 1189 LSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLN 1248 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +K+D FV+ + +T D I R++ L + L+V+AE VET+ Q+ L G +QG Sbjct: 1249 KLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQG 1308 Query: 719 YLIGRPQPLAD 729 YL GRP P D Sbjct: 1309 YLRGRPMPFDD 1319 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 104/432 (24%), Positives = 185/432 (42%), Gaps = 15/432 (3%) Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDN 359 + R + R + A D LT LPN L + E A + L +DN Sbjct: 312 LHREIQDRQRDQERIYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDN 371 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVN 419 + ++ G + + I + L +++ + + +L G E +L+L G +G + Sbjct: 372 FKHVNDSLGHRIGDALLVEIAQRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAK 431 Query: 420 ILNS--RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + + + +H + L + F + + L+ ++ A + Sbjct: 432 MQEAALQPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKADGRN-SFRFF 490 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + Q+ + + L N +R AL++ L L+ QP + G + +L + G ++ Sbjct: 491 TPTMQAQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVS 550 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ VL + L L T +VNL + Q + + Sbjct: 551 PAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELV 610 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 RL Y + P + LE+TE A ++ +++ ++QLH G R+++DDFGTGY++ LK Sbjct: 611 DRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLK 670 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R Q +KID FV+D+ + D IV +I +A+A + AE VET Q L + G Sbjct: 671 RFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGC 730 Query: 714 QYLQGYLIGRPQ 725 QG+ RP Sbjct: 731 DEAQGFYFSRPL 742 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 104/581 (17%), Positives = 213/581 (36%), Gaps = 26/581 (4%) Query: 165 TVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALS 224 + ++++ L L R + +++ +R+ + S WL Sbjct: 458 LITEMVADIGYALDRIDLVAEQARTSAALRESEVKYRKVLETSQDG-FWLLNRDWLLTEV 516 Query: 225 V-LLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQ 283 + + + ++ + + + + + Sbjct: 517 NDAYIEFSGYRREELVGMHVTQLDASDASEMARHIASAVEDGNAT--------FETRHRT 568 Query: 284 GVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN------- 336 + + + C VR R + + D LT LPN Sbjct: 569 KSGELKPVEVSVTFDAGRAACFSLFVRDLSRRDEAQEHIRRLSHFDTLTGLPNSSLFADL 628 Query: 337 -FRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQ 395 +A+ A S + ID+ + ++ G + + I + L + Sbjct: 629 LRQAIGNAQRSGESLSVMYIDIDHFQHINDTLGHRIGDRLLVEIAGRFRNALCAENTLAR 688 Query: 396 LPGSELLLVLSGPETEGRLQHMVNILNSR--QIHWNNTGLDMGYGAAWGRFDGNQETLQP 453 L G E L++L + E ++ + + + + + + + E + Sbjct: 689 LGGDEFLILLPHAQVECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFET 748 Query: 454 LLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN 513 LL + ++ + + ++ + L +R AL++ +L+L+ QP + Sbjct: 749 LLQRADTATNRAKSDGRN-TYRFFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQID 807 Query: 514 ----KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 G + ++ + G+++P +F+P+ L V+++ L L Sbjct: 808 LVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLA 867 Query: 570 KKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIE 628 + VNL Q+N+ + R+ + + LE+TE + +++ ++ Sbjct: 868 GLQLGQVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMD 927 Query: 629 QLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAK 688 LH+ G R++IDDFGTGY++ LKR + D +KID FV+D+ + IV +I LA+ Sbjct: 928 ALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLAR 987 Query: 689 AKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AE VE +Q A L G Q +QGYL RP P + Sbjct: 988 TLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDE 1028 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 89/465 (19%), Positives = 175/465 (37%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + ++ A ++ + + + + NR+ AL D LT L N R Sbjct: 160 RRDGYDFWWAVTVSTVCDSDNTVTNYVISGVDVSELKEANRKMQQMALYDSLTGLANRRL 219 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 EQ + L +D + ++ G ++++ + L ++ + Sbjct: 220 FVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRAKD 279 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L+ + + + I + + + Sbjct: 280 TVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPTDG 339 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 L+ ++ H E ++ KQ+L+ +R AL + L Sbjct: 340 ANADVLMKNADLALYRAKEHGRDR-YHFYTEELNAHALKQLLMEQELRHALQFEEFTLGF 398 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP N + + ++ G++ PD F+ + + L VL++ + Sbjct: 399 QPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKM 458 Query: 566 HPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VNL + I + P+ + LE+TE + ++ Sbjct: 459 LQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVT 518 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +++L + G +AIDDFG+GY++ LK+L + +K+D FV+DI ++ D I +I Sbjct: 519 NKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAII 578 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VVAE VET +Q+ L + QGY +P D Sbjct: 579 AVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFED 623 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 97/486 (19%), Positives = 176/486 (36%), Gaps = 22/486 (4%) Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHRS 315 + QN Y L + L + + + + Sbjct: 125 GHDQEECILEQILTTQRRVEQNDFLHDGRHYHL--VGTPLKNHDGAISRVVLLYTDITER 182 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 A D LT LPN L+ + + +D + ++ Sbjct: 183 RAAAEEIERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKEVNDTL 242 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---R 424 G ++ + L ++ + + +L G E +++L G + + L + Sbjct: 243 GHGTGDQLLQVVSERLTACLRSCDTVARLGGDEFVVLLPGITERDCVGDIAAKLLQSLCK 302 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + + +++ L + + Sbjct: 303 PVQLDAREVFTSGSIGISLWPIDGDSVSTLFKNADTAMYHAKEQGRN-TYRFYTPQMHAT 361 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPL 541 + +Q+ L N +R AL++G+L L QP + E G + +L + G++ PD+F+PL Sbjct: 362 SMEQLTLSNDLRYALERGELHLCYQPQVSFETGGLIGVEALLRWIHPKLGMIPPDRFIPL 421 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 L VL + R +VN+ + + + + + + Sbjct: 422 AEDTGLIVPIGTWVLHEACRQAMMWVAQGLPSLRVAVNISAKQFRESDFSDTVKAVLQTT 481 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 ++P + LE+TE N + ++ L G +AIDDFGTGY++ LK D + Sbjct: 482 GLAPNLLELELTEGMLIENVTQTKLTLQSLKDMGVTLAIDDFGTGYSSLSYLKHFPLDRL 541 Query: 661 KIDGVFVKDIVTNTLD-AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGY 719 KID FVK+I + D A IV ++ L + L+V+AE VE Q Q LH LQGY Sbjct: 542 KIDKSFVKEIAEKSGDAAAIVEAVVALGHSLKLTVIAEGVEQQDQVDFLHNRKCDELQGY 601 Query: 720 LIGRPQ 725 RP Sbjct: 602 FFSRPL 607 >UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Methylobacterium RepID=B1ZFY0_METPB Length = 833 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 154/764 (20%), Positives = 283/764 (37%), Gaps = 67/764 (8%) Query: 14 FTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFC 73 ++L F + ++ + ++ ++ + + L L I+ P+ Sbjct: 62 WSLHFVAMLAFRPSAQ--AAYGLLPTAAS--IGIAVTGALIALLIWCRADHHPLKLAAAG 117 Query: 74 TNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTP 133 + V + ++L A + LG +T+ L LG Sbjct: 118 MVMAAAIAGMHYAGVGAMAANSLLLFDGAYVHASLGLCAILAVTALARAGDLTGLGRRIE 177 Query: 134 IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP 193 + + ++ + G F ++ + + ++ + + + ++ + Sbjct: 178 VSLWLALAICGLHFTGMTALTVAPAAP-----LEEGGAVLGSTQLGLAVGLVSLVVLAAG 232 Query: 194 HFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTL 253 A ++ R + + + R L LA +L+ E + L T Sbjct: 233 LAALLMQRHLMRRRMDELSRMRLLGNLAHEVLLIHRDGRVVEINQAGLRLFE------TT 286 Query: 254 GVGKLRYPFLNLTWAVSTLCLLNYN---QNFLQGVETEYSLAFILAVLIS---FSVCLLY 307 + P L+L LL + L+ E E A LAV + ++ L Sbjct: 287 LQEIVGRPLLDLFADADAPALLRRSRCRPEELRPEEFEIRTAAGLAVPVELSCRAIEYLG 346 Query: 308 ------MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFC 353 +R + R AL D LT LPN LE+ E A + Sbjct: 347 RPATAVALRDLSQRRRDEARIRHLALHDALTDLPNRTLLEERLSLALETAAENGASVALV 406 Query: 354 CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR 413 L +D + ++ +G + + +L ++ + L ++ G E ++VL+ T + Sbjct: 407 YLDLDRFKPVNDFHGHAAGDALLVQAAKRMLAELRPTDTLARIGGDEFVIVLAHTRTLAQ 466 Query: 414 LQHMVNILNS---RQIHWNNT----------------------GLDMGYGAAWGRFDGNQ 448 + L + R H +++G A + + Sbjct: 467 IAETAARLVAALGRPFHLEGQNEGEGKSEGKGEGTSEGKSEGLRIEIGASAGIAVYPSDG 526 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 T + L + + E + Q + + + + A+ +G+L LY Sbjct: 527 STAETLKRAADTALYRVKDEGRG-TVRFFEAAMDEQLQARRRIEHELSGAIPRGELQLYY 585 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI N E ++ ++ + G + P F+PL Q + R VL++ A Sbjct: 586 QPIVNGRTGEIETFEALIRWHHPERGCVPPADFIPLAEQTDQIGRIGAWVLDTACAAAAA 645 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 P R SVN+ P Q A + + RY + P ++LEITE +A ++ Sbjct: 646 WP---HPWRVSVNVSPKQFRQPGFAAGVAAVLGRYGLPPGRLVLEITEGVFIQDATMAVE 702 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + L G R+A+DDFGTGY++ L+R + D IK+D FV+ + + IVR+IT Sbjct: 703 VLTALRTLGVRLALDDFGTGYSSLSYLQRFKFDKIKVDQSFVRRLGRHADTLTIVRAITH 762 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L L V E VETQ+Q A+L +LG +QGYL RP P+ + Sbjct: 763 LGHNLGLQVTVEGVETQEQLAMLRELGCDQMQGYLFARPAPMTE 806 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 100/472 (21%), Positives = 174/472 (36%), Gaps = 19/472 (4%) Query: 276 NYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPLT 332 N + + + + I L ++ + R + A D LT Sbjct: 1030 NLEFRVVHPDGSIHWVQAIGNAEYDSQGHPIRLRGLIMDVTERKTSQERLNYMAHHDHLT 1089 Query: 333 LLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLL 384 LPN L+ + + + +D + ++ G ++ + + L Sbjct: 1090 DLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQRLR 1149 Query: 385 PLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAW 441 +++ ++ + ++ G E + VL E +V L + M Sbjct: 1150 QVLRSSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGL 1209 Query: 442 GRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQ 501 F + LL ++ E ++ + VL N +R AL + Sbjct: 1210 SLFPDDGMDTAILLRNADSAMYRAKEEGRN-TYCFYAEEMTSAAFEYVLFENALRGALKR 1268 Query: 502 GDLLLYAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLES 558 + L QP + G + +L + GI++P +F+P+ Q L VL Sbjct: 1269 NEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYR 1328 Query: 559 LLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAF 617 T +VN+ + Q N + + + LE+TE Sbjct: 1329 ACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTEGLVM 1388 Query: 618 SNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDA 677 E + +E L G +AIDDFGTGY++ LKRL + +KID FV+DI +T D Sbjct: 1389 HQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDM 1448 Query: 678 MIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I ++ L KA +L ++AE VE + Q L + G QGYL +P P + Sbjct: 1449 AISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEE 1500 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 655 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 106/560 (18%), Positives = 202/560 (36%), Gaps = 29/560 (5%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYL----VPVFFI 249 +R E++ ++ A + Y + Sbjct: 509 ITKRKRAENELRQAEEKYRSIFENATEGIFQSSPSGSYISANPALARIYGYDSPQELQHH 568 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLL---NYNQNFLQGVETEYSLAFILAVLISFSVCLL 306 + +G P + S L ++ + + ++ + +L Sbjct: 569 LTDIGRQLYVNPDRRQQFVHSILEQGQVTDFESQVYRKDGSVIWISENARAVRDRQGNIL 628 Query: 307 ---YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCL 355 V + H QA D LT LPN + + + L Sbjct: 629 YFEGTVEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFL 688 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + ++ + + LLP ++E + + + G E L+L +T Sbjct: 689 DLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPHVQTPADSV 748 Query: 416 HMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + L + L + + + E LL ++ Sbjct: 749 KIAERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNADAALYRAKEEGRNG 808 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYD 529 M++ + + + L + + AL+Q +L +Y QP N E + ++ Sbjct: 809 LYC-YTPMLNSRGHELLALESELHKALEQQELDVYYQPQINAATGEILRLEALVRWQHSQ 867 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKN 588 G+++P F+ L + L VLE+ G +VNL Q + Sbjct: 868 LGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGFPGLGTAVNLSVRQFQQPH 927 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 + ++ + ++ + LEITE A N + + +L + G IA+DDFG+GY++ Sbjct: 928 LVQQVAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHELDQMGVGIALDDFGSGYSS 987 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 L++ IKID F++++ + D IV+++ L + +LSVVAE VE+Q Q +L Sbjct: 988 LNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLNLSVVAEGVESQSQLKVL 1047 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 LG +QGY G P A Sbjct: 1048 RSLGCDIIQGYFFGPPIAAA 1067 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 105/480 (21%), Positives = 198/480 (41%), Gaps = 24/480 (5%) Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVC-LLYMVRIYHRSEWLNRRWHLQALTDP 330 Y + G ++ L+ + + + R + R + A DP Sbjct: 376 FSEGKYYALEMPGGRRDFELSVASKAGKEKGIQRYVMLSRDITERKENEARINNLAFFDP 435 Query: 331 LTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN R L+ Q A + + +D+ + ++ + G + + ++ Sbjct: 436 LTQLPNRRLLQDRLEHAIATGQRQAALGALLYIDLDDFKTLNDNRGHHVGDLLLIAVADR 495 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRL---------QHMVNILNSRQIHWNNTGL 433 L ++ + + +L G E L++L G + + ++ LN + Sbjct: 496 LRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQAAQQVQQIAEKILQSLNQV-YVLDEQEY 554 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 F + ++ LL + + A L + + ++ L N Sbjct: 555 FNSPSIGICLFGDDDADIEDLLKRADQAMYHAKAAGRN-TLRFFDPHMQASAAQRFALQN 613 Query: 494 TIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 IR AL LY QP + G + ++ L + G+++P F+P+ + L Sbjct: 614 EIREALLFNQFKLYYQPQVDRTGRITGAEALIRWLHPERGMISPMDFIPIAEESGLILPL 673 Query: 552 DLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 +L++ + L + S+N+ Q + +++ R +P + L Sbjct: 674 GNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQQPDFVTQVLAAVTRTGANPHQLTL 733 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE +N + + ++ L G + ++DDFGTGY++ LKRL + +KID FV D Sbjct: 734 ELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLPINELKIDKSFVND 793 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I+T+ DA I R + LA++ L+V+AE VETQ+Q+ L + G + QGY G+P + Sbjct: 794 ILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQGYYFGKPVGAEE 853 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 107/479 (22%), Positives = 186/479 (38%), Gaps = 29/479 (6%) Query: 275 LNYNQNFLQGVETEYSL-AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTL 333 +++ GVE S A +L+ + L+ V R A D LT Sbjct: 169 MDHRIVLDDGVERIVSQHAELLSADDGRTSRLVGTVHDITERTLAEERIRYLAHHDTLTA 228 Query: 334 LPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLP 385 LPN E+ + L +D+ + ++ G ++ L+ Sbjct: 229 LPNRFQFEERMEQALAFAQRNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAGRLMK 288 Query: 386 LMQENEKL------------YQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNN 430 ++ ++ L ++ G E ++L+ + + S++ Sbjct: 289 CLRRSDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGG 348 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + +G F + E LL + ++ +++ Sbjct: 349 HEVFVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRN-TYQYYSGSMNAMALERLT 407 Query: 491 LLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNL 547 L N +R AL + + L QP + G + +L+ + ++ PD F+PL + L Sbjct: 408 LENNLRWALKRNEFRLCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGL 467 Query: 548 SARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 A VL + T R +VNL L + +A + ++ + + P Sbjct: 468 IASIGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSH 527 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE SN E + I L K G R ++DDFGTGY++ RL R D +KID F Sbjct: 528 LELEITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSF 587 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 V+DI + A + +I +A+ L+V+AE VET +Q A L G +QG+L +P Sbjct: 588 VRDISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPL 646 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 112/488 (22%), Positives = 203/488 (41%), Gaps = 26/488 (5%) Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 + S+L + Q +G Y + ++ ++ + + ++ A Sbjct: 523 YEGSSLKMEFRIQGEKEGEMWVYLTGDSIRDENGQAIRIIGSITNISEKKQQEKQIMHLA 582 Query: 327 LTDPLTLLPNFR--------ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 D LT LPN R A+ A + +D + ++ G I+ Sbjct: 583 FHDGLTGLPNRRLLRSRLELAMTDADRYNYKLGLLLIDLDRFKVINDTLGHQAGDELIQK 642 Query: 379 ICRTLLPLMQENEK----------LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQ 425 + L M+ + + +L G E +++L+ LQ N++ Sbjct: 643 VADVLELTMRSPDTHSRAKQEHTTVARLGGDEFIILLTHITDVSDLQASANLIIEKFKEP 702 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 N + + + L G ++ + ++ ++ T Sbjct: 703 FFIQNQDVFTSASIGISVYPDHGRDYDSLTGNADIAMYRAKENGKNQ-MEMYSSEINTLT 761 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++ + N +R AL++ + +L+ QP N E G + +L D GI++P +F+PL Sbjct: 762 MERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLA 821 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYH 601 + L VL+ + P+ SVN+ L +K+ + + + Sbjct: 822 EETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDTQ 881 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + Q + LEITE A N + SM +++L + G +IAIDDFGTGY++ LK+L IK Sbjct: 882 LPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIK 941 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F++D+ + D IVR+I +A + L+V AE VET+ Q+ +L + YLQGYL Sbjct: 942 IDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLY 1001 Query: 722 GRPQPLAD 729 +P P + Sbjct: 1002 SKPLPAEE 1009 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 107/551 (19%), Positives = 208/551 (37%), Gaps = 51/551 (9%) Query: 228 LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVET 287 LL TP E F+ + + + L V + F + Sbjct: 534 LLGRTPVECFFLREEIQERRRALSSETGFDPASDIDVLLARVRLGSVDQGQWTFQRKDGE 593 Query: 288 EYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNR------------------------ 320 ++ + ++ L + L++ + Sbjct: 594 KFIVELSISALHPEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSELESEV 653 Query: 321 --------RWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMS 364 + A D LT L N L+Q + + + + +D + ++ Sbjct: 654 LERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTIN 713 Query: 365 RHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS- 423 G + ++++ L ++ N+ + +L G E +++L E + + + Sbjct: 714 DSLGHHIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDA 773 Query: 424 --RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 I + L + + + T+ L+ Q+ A+ + Sbjct: 774 LRPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRN-TYCYFTAEM 832 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKF 538 + + + +R A+D+ + ++ QP+ + Y+ ++ G++ P +F Sbjct: 833 NAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQF 892 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 + + + L VL L + + P ++NL P+ N+ I R+ Sbjct: 893 ITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICRIL 952 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 + Y ++P + LEITE + E ++ ++ L GFR++IDDFGTGY++ LKR Sbjct: 953 RDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPV 1012 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 D +KID F+ D+ N D IV +I LA + LSV+AE VET++Q LL L + Q Sbjct: 1013 DTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQ 1072 Query: 718 GYLIGRPQPLA 728 GY + +P P Sbjct: 1073 GYYMAKPMPAE 1083 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 113/558 (20%), Positives = 207/558 (37%), Gaps = 33/558 (5%) Query: 203 DIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGV-GKLRY- 260 DI + S SV +L+ P + + Y+ P F I + + + Sbjct: 482 DITEQKRADLALRLQSRALDASVNAILITAPSPSGNLIEYVNPAFMRITGYDLDEVIGHD 541 Query: 261 ------------PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCL 305 + A++ ++ + + +A + Sbjct: 542 CRVLQRDDRDQEGVALIREALAANREVSAVVRNYRKDGALFWNQLFIAPVPNAEGVITHH 601 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + ++ + QA D LT LPN L G + L + Sbjct: 602 IGVINDVTELIRYQEQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVAVVFLDL 661 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ-- 415 D + ++ G + + + L + ++ + + G E ++V++ E L Sbjct: 662 DGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVARHGGDEFVIVMTDTVDEQSLITW 721 Query: 416 -HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLAL 474 V + + + T L +G F + + + L+ + ++ Sbjct: 722 MERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDMGRN-TF 780 Query: 475 DSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGG 531 + ++ ++ L +R AL + LL+ QP + + G + ++ + G Sbjct: 781 QFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAG 840 Query: 532 IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIA 590 ++ P F+PL + L VL + P R SVNL Q+NIA Sbjct: 841 LVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVNLSARVFQQRNIA 900 Query: 591 GRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE 650 ++++ + P+ + LE+TE NAE ++ + +LH G +AIDDFGTGY++ Sbjct: 901 KLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLS 960 Query: 651 RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHK 710 LKR D +KID FV DI + D I +I LA + L V+AE VET Q L + Sbjct: 961 YLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKE 1020 Query: 711 LGVQYLQGYLIGRPQPLA 728 +QG+ +P Sbjct: 1021 RACDEMQGFYFAKPLSTE 1038 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 93/430 (21%), Positives = 172/430 (40%), Gaps = 16/430 (3%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCLRIDNLEFMSR 365 + R A DPLT LPN Q + +D + ++ Sbjct: 575 DRKTTEERLTYLAQFDPLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFADLDRFKIVND 634 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR- 424 G + + + L ++ + + +L G E L+LS + + S Sbjct: 635 TMGHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDATLIAEKVISAL 694 Query: 425 --QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + G+ LL Q+ ++ Sbjct: 695 QVPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQG-PAIYQFYLPQMN 753 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFL 539 + ++ + +R AL + + +L+ QP N E G++ +L G++ P +F+ Sbjct: 754 ERAVARLKIETQLRGALARREFVLHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFI 813 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFK 598 ++ L V++++ + + ++NL Q+++ I + Sbjct: 814 SVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETLR 873 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 +I P+ + E+TE AE + ++ L FG +I++DDFGTGY++ LKR D Sbjct: 874 ATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLD 933 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 ++KID F++D+ T+ DA I ++ LA + L VVAE VET+ Q L + G +QG Sbjct: 934 VLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQG 993 Query: 719 YLIGRPQPLA 728 Y +P PL Sbjct: 994 YYFSQPLPLE 1003 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 92/487 (18%), Positives = 187/487 (38%), Gaps = 33/487 (6%) Query: 275 LNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRSEWLNRRWHLQALTDPL 331 +N + Q + ++ V + + V + A D L Sbjct: 212 GGWNHSLNQADGSRLNVQHQAEVFYDENGAAKVVSGTVVDVTELTQAQDQILQLAHFDSL 271 Query: 332 TLLPNFRAL--------EQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T L N A E+A + + L +DN + ++ G + ++ + R L Sbjct: 272 TGLANRNAFRKRVELAMERAKQYGHLGAVLFLDLDNFKRINDTLGHSIGDQLLQEVARRL 331 Query: 384 LPLMQENEKLY--------------QLPGSELLLVLSGPETEGRLQHMVNILNSRQ---I 426 +++ ++ + +L G E ++L +H + + I Sbjct: 332 TDIVRGSDSICGTNFNHAIDDNLISRLGGDEFTVLLPEIGKIKDAEHAARRVLNSIGDII 391 Query: 427 HWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTT 486 + + + + F + E + LL + ++ Sbjct: 392 NLSGHDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRAGKND-YELFVNSMNVVAK 450 Query: 487 KQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIA 543 +++ L + +R A+D +L + QP + G + +L + G+++P +F+P+ Sbjct: 451 RRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAE 510 Query: 544 QFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHI 602 + L + VL + + D + +VN+ ++++ + ++ + Sbjct: 511 ETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQSLDKLVSKVLLETGL 570 Query: 603 SPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKI 662 + LEITE + E ++ + +L G +AIDDFGTGY++ LKR D +KI Sbjct: 571 PVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKLKI 630 Query: 663 DGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIG 722 D F+ + T DA + ++I +A L+V+AE VE Q L + + +QGY Sbjct: 631 DRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFS 690 Query: 723 RPQPLAD 729 RP +D Sbjct: 691 RPLIASD 697 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 100/431 (23%), Positives = 180/431 (41%), Gaps = 18/431 (4%) Query: 314 RSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSR 365 E +R A D +T LPN +ALE A + + + +D + ++ Sbjct: 424 EQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIFIDLDRFKNIND 483 Query: 366 HYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLS----GPETEGRLQHMVNIL 421 G + + + L ++ + + +L G E ++VL ++ + L Sbjct: 484 SLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISAAHAVRKIQQTL 543 Query: 422 NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMV 481 S+ + L++ + + ET+Q L+ + + + + + Sbjct: 544 -SQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRN-SYQFFTQEM 601 Query: 482 SGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKF 538 + +++L + +RTAL++ +++L+ QP + E G + +L G + PD F Sbjct: 602 NLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVF 661 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLF 597 +P+ L L+S + LA R +VNL Q N+ + + Sbjct: 662 IPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADIL 721 Query: 598 KRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQA 657 ++ + LEITE A + +++ ++ L + G +AIDDFGTGY++ LK Sbjct: 722 AATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPV 781 Query: 658 DIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQ 717 + +KID FV+ I T++ DA I + LA VVAE VET+ Q L LQ Sbjct: 782 NRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQ 841 Query: 718 GYLIGRPQPLA 728 GY P A Sbjct: 842 GYFFSEPLSAA 852 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 101/459 (22%), Positives = 185/459 (40%), Gaps = 22/459 (4%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 IL + + + QA D LT LPN R L Sbjct: 342 ISILRRSDGGVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPNRRLLNDRLAHALAAN 401 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 E + L +D + ++ G + + R + ++E + + ++ G E ++ Sbjct: 402 KRNEDCGALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVV 461 Query: 404 VLSGP-----ETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 +L + H+ + S ++ N E+ + L+ Sbjct: 462 LLENLGADIKDATQAAAHIAEKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELI 521 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK- 514 Q Q+ A+ + + L + +R A+ + L L+ Q + Sbjct: 522 KQADMAMYQAKEAGRN-AVRFFDPQMQQSVETIAALESDLRHAVHERQLQLFYQIQLDHT 580 Query: 515 -EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKK 571 G + +L + G+++P +F+P + +L VL+ + +A + Sbjct: 581 HHPVGAEALLRWIHPVRGMVSPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTR 640 Query: 572 GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 +VN+ Q + ++ + +++ I P + LE+TE A + + + L Sbjct: 641 DLVLAVNISARQFKQPDFVEQVGAMIRKHAIQPARLKLELTESIALEELDVIITKMHALR 700 Query: 632 K-FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 G +++DDFGTGY++ LKRL D IKID FV+D+ ++ DA++V++I D+A Sbjct: 701 NGLGISLSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNF 760 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + V+AE VET Q LL + G QGYL GRP PL + Sbjct: 761 GIEVIAEGVETAGQFFLLKQYGCLLFQGYLFGRPVPLRE 799 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 102/472 (21%), Positives = 177/472 (37%), Gaps = 17/472 (3%) Query: 273 CLLNYNQNFLQGVETEYSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 +L++ + ++ + I +L V + R A D L Sbjct: 490 SVLDFETLGCERNGAVRQVSLSSRYIDIDGEKHVLTFVHDITDRKEAQARIEYLAHHDAL 549 Query: 332 TLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN A + + +D+ + ++ G + ++ + L Sbjct: 550 TGLPNRVLFRDRFALATAWAERAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRL 609 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAA 440 ++E + + +L G E L+ L+ + + +R L Sbjct: 610 RECLRETDTVSRLGGDEFLIALTDIRDPQAINSATAKIFDTLTRPFELEGHELTNTMSIG 669 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 + + E LL Q+ E ++ +Q+ L + +AL+ Sbjct: 670 IAIWPDDGEDFDTLLKNADTAMYQAKRAGRN-TWRFYTEQMNANAVEQLQLRTALHSALE 728 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + LL+ QP N G + +L ++ PD+F+P + L VL Sbjct: 729 NDEFLLHYQPQINLASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLR 788 Query: 558 SLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 +VNL + + ++ ++R + P + LE+TE Sbjct: 789 EACMQAVRWTRQGLPELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELELTESLL 848 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 + ES + + +L G R++IDDFGTGY++ LKR D +KID FV+DI T+ D Sbjct: 849 LVDTESVIETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPDD 908 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 A IVR+I +A L V+AE VE++ LH QGY RP P Sbjct: 909 AAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGD 960 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 98/448 (21%), Positives = 182/448 (40%), Gaps = 19/448 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGK 350 + + + + + R A DPLT LPN AL+ A + Sbjct: 498 VGHVTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRV 557 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + L +D + ++ G +R++ L ++E + L +L G E +++L E Sbjct: 558 AVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEA 617 Query: 411 EGRLQHMVNIL---NSRQIHW-NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + L + N + + + + + L+ ++ Sbjct: 618 PADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAK 677 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEIL 523 A E + T+++ L +R AL+ + ++Y QP+ + G + ++ Sbjct: 678 AQGRN-TYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALV 736 Query: 524 ARLKYDGG-IMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMP 581 G +++P F+P+ + L VL + + + +VNL Sbjct: 737 RWK-PQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSA 795 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 +++++ + + + + LEITE E ++ +E+L + G +AIDD Sbjct: 796 EQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDD 855 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ LKR D +KID FV+DI ++ D I +I +A+A ++V AE VE Sbjct: 856 FGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEG 915 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 + Q LL LG QGYL P P + Sbjct: 916 EAQLELLRGLGCGSYQGYLCSPPLPADE 943 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 108/463 (23%), Positives = 188/463 (40%), Gaps = 23/463 (4%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE-- 345 E+ + + + + A D LT LPN R L Sbjct: 539 EWLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLPNRRLLHDRLRVA 598 Query: 346 ------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 E + + +DN + ++ G M ++ + + L ++E + + +L G Sbjct: 599 IASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGD 658 Query: 400 ELLLVLSGP--ETEGRL-------QHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET 450 E +++L E + ++ +LN R + F G Q Sbjct: 659 EFVVMLENLGERPEEAAGQSRIVGEKIIKLLN-RPYDLSGHDYHNTPSVGITLFGGQQVG 717 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + L+ + ++ A AL + + T + + +R A+ + L QP Sbjct: 718 IDELMKRADLAMYEAKASGRN-ALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLAYQP 776 Query: 511 IRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-- 566 + + G + +L G ++P +F+P+ + L L VLE+ A Sbjct: 777 QVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAA 836 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 ++ SVN+ Q N +++ + R P+ + LE+TE N + + Sbjct: 837 RPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAK 896 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L G ++DDFGTGY++ LK+L D +KID FV+D++T+ D +I R+I L Sbjct: 897 MSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIAL 956 Query: 687 AKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 A+ LSV+AE VE+ +QQ L G QGYL RP LAD Sbjct: 957 ARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALAD 999 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 106/467 (22%), Positives = 202/467 (43%), Gaps = 40/467 (8%) Query: 300 SFSVCLLYMVRIYHRS-------EWLNRRWHL-------QALTDPLTLLPNFRALEQAP- 344 +L + R + N + QA +DPLT LPN R + Sbjct: 239 GRLTSVLAIGRDITELYESRAALKRANAQLENMNDLLQSQATSDPLTGLPNRRFMLDRLK 298 Query: 345 -------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLP 397 + + +DN + ++ G + ++ + L ++E + + +L Sbjct: 299 HALASSSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAHRLETCVREGDTVARLG 358 Query: 398 GSELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 G E +++L E + + + + + + F+ +Q+ Sbjct: 359 GDEFVVMLEDLSEKDLEAAAQTEAVGEKILAALNQPYQLGKHEYRNTPSIGATLFNDHQQ 418 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 +L LL Q Q+ AL + + + L N +R AL+ L+ Q Sbjct: 419 SLDELLKQADIAMYQAKRAGRN-ALRFFDPQMQETINSRATLENELRKALELHQFYLFYQ 477 Query: 510 PIRN-------KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKW 562 + G + ++ + G+++P +F+PL + L L VL++ Sbjct: 478 VQVDSVQEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAEETGLIVPIGLWVLDTACAQ 537 Query: 563 LATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNA 620 L T D +G +VN+ Q + ++ +R+ I P+ + LE+TE N Sbjct: 538 LKTWQHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGIDPKLLKLELTESLLLENI 597 Query: 621 ESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIV 680 + ++ + L + G R ++DDFGTGY++ + LK+L D +KID F+ D+V+++ D IV Sbjct: 598 QDTIATMNALREIGIRFSLDDFGTGYSSLQYLKQLPLDQLKIDQSFICDLVSDSSDRAIV 657 Query: 681 RSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 R+I +A++ +L+V+AE VET+ Q+ +L + G + QGYL +P P+ Sbjct: 658 RTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHHQGYLFSKPVPI 704 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 108/471 (22%), Positives = 184/471 (39%), Gaps = 25/471 (5%) Query: 283 QGVETEYSLAFILAVLISF---SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + ++ + + + H A DPLT +PN R Sbjct: 245 RKNGEIFPEWLTISGVRDGRGKVTHYVSTFSDISNLKVAESEIHHLAFYDPLTAMPNRRL 304 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + ID+ + ++ G + H + + R L ++E + Sbjct: 305 LLNRLDQACVSAKRSGQFGALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGD 364 Query: 392 KLYQLPGSELLLVLSGPETEGR-----LQHMVNIL---NSRQIHWNN-TGLDMGYGAAWG 442 + G E +++L +E + + + +R N T Sbjct: 365 TAARQGGDEFVVMLEELGSEQEGAAVQAEIVAEKIRLELARPYLLNGDTEYFRSASIGIS 424 Query: 443 RFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 F G ++T+ LL Q ++ A+ + + ++ L +R AL + Sbjct: 425 LFFGQEKTIDILLKQADIALYKAKDAGRN-AIRFFDTAMQTTLDERAELEAGLRRALVRD 483 Query: 503 DLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 + +LY QP + G + +L ++ P+ F+PL + L + VL+ Sbjct: 484 EFVLYVQPQVDAVRRLIGAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQAC 543 Query: 561 KWLATHPCDKKG--PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 L D + SVN+ Q + ++ R+ +P+ + LE+TE Sbjct: 544 AELRRWADDPRSASLFLSVNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLD 603 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 N E + ++ L G R ++DDFGTGYA+ LKR + +K+D F++DI N DA Sbjct: 604 NVEEVIEKMQALRTIGVRFSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAA 663 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 IVR+I + LSVVAE VE Q A L K QGYL GRP D Sbjct: 664 IVRAIIAMGNTLRLSVVAEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDD 714 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 88/464 (18%), Positives = 180/464 (38%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + + + + + + + + A DPLT LPN Sbjct: 792 RKSGEIFPKWLTIDAIRDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRAL 851 Query: 340 LEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 EQE S + +D ++++ G + + + ++ ++ Sbjct: 852 FRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSD 911 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L G E + + + + +G + Sbjct: 912 TVARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDG 971 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 E + L ++ ++ +++ L +R A++ L L+ Sbjct: 972 EDYETLTKHADTAMYRAKEEGRG-TYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHY 1030 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G+++P F+P+ + L V++ Sbjct: 1031 QPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKR 1090 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + + ++NL + ++ R ++ ++P+ + +EITE A + ++ Sbjct: 1091 LARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTI 1150 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 I +L G +++IDDFGTGY++ LK+L + +KID F++D+ ++ D IV SI Sbjct: 1151 EQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSIL 1210 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A A LSVVAE VE Q Q L + +QGY +P P Sbjct: 1211 SMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFE 1254 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 91/464 (19%), Positives = 177/464 (38%), Gaps = 19/464 (4%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + R + + D LT LPN Sbjct: 238 RKNGEIYPQWVNISAIRTGDGQTESYVGVFTDLTRIKESEENLLYLSGHDALTELPNRLL 297 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 Q + + + +D + ++ G + + + L + Sbjct: 298 FHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKA 357 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 L +L G E +VL + + ++ I + +G + + Sbjct: 358 TLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDG 417 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 E L+ + ++ + ++LL + +R A+D+ + LL+ Sbjct: 418 EKPSVLMRNAESAMYHAKQSGRN-NFQFYRSELNTASLARILLESGLRNAVDRQEFLLFY 476 Query: 509 QPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ + G+++P +F+PL + L L+ + Sbjct: 477 QPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKV 536 Query: 566 HPCD-KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 R SVNL + + ++R + P + LE+TE A + E ++ Sbjct: 537 WMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETL 596 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + L +FG +AIDDFGTG+++ LK+ D +KID FV++ + DA I+R+ Sbjct: 597 EKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFI 656 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +LA + +L V+AE VE +Q L + +QGY GRP Sbjct: 657 NLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGD 700 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 100/474 (21%), Positives = 188/474 (39%), Gaps = 18/474 (3%) Query: 270 STLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTD 329 + ++ G+ + L + LL + + + A D Sbjct: 223 VRVIEEDHVPRKDGGMAILRTKKIALLNAEGRAEYLLGVSEDIAERKRAEAQIARLAHYD 282 Query: 330 PLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 PLT LPN + + + + + +D + ++ G + ++ Sbjct: 283 PLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDRFKTVNDTLGHPLGDALLKIAAE 342 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 L ++E + + +L G E +V +G + + + + + +G Sbjct: 343 RLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATRLAARIVEAMAAPFDLQGHHVVIGAS 402 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 + + LL + ++ A A E + Q + L +R A Sbjct: 403 VGVSLAPTDGDDADELLKKADMALYRAKADGRG-AYHFFERAMDEQLQARRALELDLRRA 461 Query: 499 LDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L G+ L+ QP+ ++ G + +L + G+++P F+PL + L + V Sbjct: 462 LQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQLGEWV 521 Query: 556 LESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 L A P R +VNL P + + ++ + Q + LEITE Sbjct: 522 LRRACAEAANWPE---HVRLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESV 578 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 +++++M + L G RI++DDFGTGY++ L+ D IKID FV+DI+ ++ Sbjct: 579 LLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSD 638 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I++++ DL + + AE VETQ Q L + G +QGY I RP P ++ Sbjct: 639 AMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASE 692 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 112/498 (22%), Positives = 200/498 (40%), Gaps = 20/498 (4%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLL 306 F G + + + A+ C + + + +A + + Sbjct: 310 FLQGHDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPDPHGGEPRYFV 369 Query: 307 YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRID 358 + + QA D LT L N L++ S + ID Sbjct: 370 GVQKDITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDID 429 Query: 359 NLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMV 418 N + ++ G IR + + L +++ + + +L G E +L+L+ + + +V Sbjct: 430 NFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVV 489 Query: 419 NILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALD 475 + + L + F + LL Q+ A Sbjct: 490 QRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSN-NFR 548 Query: 476 SREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGI 532 + ++ + ++ L N + AL+ L+L+ QP N + G + ++ G+ Sbjct: 549 FYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGM 608 Query: 533 MTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAG 591 + P +F+PL L + V+E+ R +VNL L QK++ Sbjct: 609 IPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVH 668 Query: 592 RIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYER 651 I + + + PQ + LEITE N E S+ + ++ G ++++DDFGTGY++ Sbjct: 669 CIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSY 728 Query: 652 LKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKL 711 LKRL + +KID F+ DI T DA+I RSI LA + + V+AE VE+ Q A L + Sbjct: 729 LKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLEN 788 Query: 712 GVQYLQGYLIGRPQPLAD 729 G +QGYL+ RP+P + Sbjct: 789 GCDEVQGYLLSRPRPFEE 806 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 98/465 (21%), Positives = 187/465 (40%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + +Y+ L + + + + + R + DPLT LPN R Sbjct: 507 RKNNEQYAEWVTLTAVNNEEGKVINYVGVFADISEIKHSQSRLNELVNRDPLTGLPNRRL 566 Query: 340 LEQ--------APEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + A ++ + + +D + ++ G M + + + + +++++ Sbjct: 567 MHELLDHAIKYAEREQNEIALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSD 626 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++++ + + + + L + + + Sbjct: 627 AVARLGGDEFIVMMDVLREREDAAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDS 686 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ Q +S ++ L N +R AL + +Y Sbjct: 687 LDVDGLIKAADIAMYQVKNKGKN-NHCFYSADLSQNAVERFTLENQLRRALARDQFEVYY 745 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 Q + G + ++ + + G+++P KF+PL + L VL + Sbjct: 746 QAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKE 805 Query: 566 HPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 SVN+ + + + N A + + + LEITE N E + Sbjct: 806 WHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVI 865 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +++ G R+AIDDFGTGY++ LKRL D IKID FV+D+ N+ DA I +I Sbjct: 866 DVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAIN 925 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A++ +V+AE VET+QQ + L K+G Q QGYL RP ++ Sbjct: 926 AMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTASE 970 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 652 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 93/456 (20%), Positives = 192/456 (42%), Gaps = 16/456 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA---- 343 EY+ + + + + + ++ QA D LT LPN LE Sbjct: 335 EYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHA 394 Query: 344 ----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + L +D + ++ G + ++ + L ++ ++ + +L G Sbjct: 395 IEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGD 454 Query: 400 ELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E ++VL+ ++ L + + + + + +G + + + L+ Sbjct: 455 EFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMK 514 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--- 513 ++ + ++ + ++ L +R AL +G+ L+ QP + Sbjct: 515 DADTAMYRAKQKGRN-TFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQT 573 Query: 514 KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-G 572 G + ++ + G ++P F+P+ + NL + VLE + +A G Sbjct: 574 GRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTG 633 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 + +VN+ L + I L +Y + P + +E+TE + + ++ + +L + Sbjct: 634 IKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLRE 693 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 G ++++DDFGTGY++ LKRL IK+D FV+D+ + +A IV +I LA A + Sbjct: 694 IGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDM 753 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 S+VAE VET+ ++ L G +QG+ +P P Sbjct: 754 SIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPAD 789 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 89/464 (19%), Positives = 173/464 (37%), Gaps = 18/464 (3%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + ++ + + + + + + + D LT LPN Sbjct: 488 HRDGHIFPAWQSVSAVKGPDGSTTHYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAY 547 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + L +D + ++ G + + + + + + Sbjct: 548 FQARLDQLIEAAARDRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGD 607 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGNQE 449 + + G E +++L+ + + ++ ++ L + + + Sbjct: 608 FVARQGGDEFVVILADSDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAG 667 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + L+ + + +S T+++ L N + AL G+ LY Q Sbjct: 668 DSESLIKSADAAMYHAKSLGRN-TYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQ 726 Query: 510 PIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P ++ G + ++ + G + P +F+PL + + R VLE + Sbjct: 727 PQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREW 786 Query: 567 PCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 +VNL PL L + + ++ L ++P + LE+TE + Sbjct: 787 QAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSD 846 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L + G R +IDDFGTGY++ L R D +KID F++D+ A I R+I Sbjct: 847 MLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIA 906 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LAK L VVAE VET +Q L + G QG+ RP P + Sbjct: 907 LAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADE 950 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 106/477 (22%), Positives = 197/477 (41%), Gaps = 27/477 (5%) Query: 275 LNYNQNFL--QGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + + + + +++ + L ++++ + + + A DP Sbjct: 320 GRHEEELMLHRRDGSQFWAHLRVRQLDPAQPQAGCIWVIEDISARKAVEDEVNRLAFYDP 379 Query: 331 LTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT LPN R L + + +DN + ++ G ++ + + Sbjct: 380 LTQLPNRRLLRDRLAQALAASARSGMHGALIFIDLDNFKSLNDTLGHARGDQLLKLVGQR 439 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGP---------ETEGRLQHMVNILNSRQIHWNNTGL 433 L ++E++ + +L G E ++++ + EG + +++ LN + + Sbjct: 440 LTHCVRESDTVARLGGDEFVVIVQDLGARLDECATQAEGVGEKILDALN-QPYPLDGHVR 498 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 F +++++ LL + Q+ L + + ++ L Sbjct: 499 HSTPSIGITLFADDRDSVDDLLKEADMAMYQAKTAGRN-TLRFFDADMQAMLVQRAALEE 557 Query: 494 TIRTALDQGDLLLYAQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 +R ++ LL+ QP + G + +L G++ P +F+PL NL Sbjct: 558 DMRESMRLSHFLLHYQPQVVGSGRITGAEVLLRWPHPLRGLVPPAEFIPLAEDTNLITAL 617 Query: 552 DLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VLE+ K LA D K SVN+ Q + ++ + +R P + L Sbjct: 618 GHWVLETACKTLADWSAQDDMKHLSVSVNVSARQFRQPHFVAEVMSILERTGADPHLLKL 677 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE + E + + L G ++DDFGTGY++ LKRL D +KID FV+D Sbjct: 678 ELTESLLVEDVEDIVAKMSALKSRGVGFSLDDFGTGYSSLAHLKRLPLDQLKIDQSFVRD 737 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 I+T+ D I R + LA + L+V+AE VE Q+ LL ++G QGYL RP P Sbjct: 738 ILTDPNDLAIGRMVVALADSLGLTVIAEGVELAAQRELLAQIGCDAYQGYLFSRPLP 794 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 109/597 (18%), Positives = 211/597 (35%), Gaps = 26/597 (4%) Query: 157 FGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 D ++ +V +LF Y +T + Q L+ + G Sbjct: 535 RQDGSELWAIVSTNALFNPEGDYMGTLGLITDITKRKRTEQALYDSEKR-LEGILNSLQD 593 Query: 217 LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN 276 + W A L P + F ++ + L Sbjct: 594 VIWSADPKTRQSLYLNPAIQLVYGRPMEDFFRDPHLWLCMVHPEDQELVSHHLKLLEDKG 653 Query: 277 YNQ---NFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 + ++ L ++ S+ + + + + A D Sbjct: 654 STEVHYRIIRPDGETRWLHSRSRLVYDEQGKSLRIDGINSDITERKQAEEQLQYNATHDT 713 Query: 331 LTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICR 381 LT LPN E + L +D + ++ G + +R I R Sbjct: 714 LTQLPNRLLFMDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIAR 773 Query: 382 TLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYG 438 L ++ ++ L +L G E ++L + + +R + + Sbjct: 774 RLQKSLRADDTLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNTS 833 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 +G E +L ++ A ++ + ++ L +R A Sbjct: 834 IGIALSNGEYEAASEILRDADTAMYRAKA-GGKACYAIFDQQMHASAVSRLQLETDLRRA 892 Query: 499 LDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 +++ + L+Y QPI + + G++ ++ G++ P +F+P+ + L + Sbjct: 893 IERQEFLVYYQPIISLQHDTLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEWI 952 Query: 556 LESLLKWLATHPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEIT 612 LE + L + + SVNL L ++ G I R+ + I A+ +EIT Sbjct: 953 LEQAAQQLKIWQTQYRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEIT 1012 Query: 613 EEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVT 672 E N + + + L + I +DDFGTGY++ L R + +KID FV + Sbjct: 1013 ESILMENVQVAADVLIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMRP 1072 Query: 673 NTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 N ++ IVR+I LA + ++AE +ET+ Q A L +G + QGY +P ++ Sbjct: 1073 NDENSEIVRAIVSLAHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSE 1129 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 87/445 (19%), Positives = 181/445 (40%), Gaps = 17/445 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKS 351 + + + +R A D LT LPN L+QA + Sbjct: 779 GTVTNYIALFTDISAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVA 838 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 + +D+ + ++ G + + + L +++ + + +L G E +++L+ E Sbjct: 839 VIFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDS 898 Query: 412 GRLQHMVNI----LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 +++ ++ L + L F + LL ++ Sbjct: 899 HQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKE 958 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE---GYDEILA 524 E ++ + +++ + ++R +++ +LLL+ QP + G + +L Sbjct: 959 VGRN-NYHFYTEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLR 1017 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPLT 583 D G+++P +F+P+ + L QV+ + + L+ S+N+ + Sbjct: 1018 WQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQ 1077 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + +++L + +SP + LE+TE +A ++ +E L GF +IDDFG Sbjct: 1078 FRDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFG 1137 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ L R D +KID F++ ++ D I+++I L + V+AE VE + Sbjct: 1138 TGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKED 1197 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 + L G +QGY + RP Sbjct: 1198 EYRALRAAGCDGIQGYFVARPLTPE 1222 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 118/756 (15%), Positives = 254/756 (33%), Gaps = 57/756 (7%) Query: 20 LTVVLIQLSRFISPLAIIHSSYIF--LAWMPLC---VMLSILFIFG---------WRGVV 65 + L+ +S A++ F L + ++ +++++ G W Sbjct: 81 IAAALLAMSGLDGLHAMMPDGESFVWLHSLATAFGGLLFAMIWLPGHWFKPVMRHWPLNA 140 Query: 66 PVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQR- 124 ++ Q V+ + L + LT R+ + Sbjct: 141 FLMAAAMGIYSILQPGQIPQMLASGQFTQAAVIMNIGGGLFLLLAAVKLFLTYRHSAKSE 200 Query: 125 ----LFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN 180 F ++ I + + + G ++ VV + + Sbjct: 201 DLLFFFQCLILASAAITFMQSSIWDMPWWGWHMQRLAGYTLTLWLVVKTAKTIEGKTLLS 260 Query: 181 MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS----WLAALSVLLLLLCTPYEN 236 L + I A+ R E T + + + +P + Sbjct: 261 NRL--LKQQIEDRKQAENQLRIAATAFETHEAIMITDAHANIIRVNQAFQNITGYSPEDV 318 Query: 237 DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILA 296 ++ + + +W + Y + Sbjct: 319 IGKNPRVLSSGRQGSEFYAAMWKRLLGSGSWTGEIWDK--------RKNGEVYPKWLTIT 370 Query: 297 VLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------E 345 + + + + + + A D LT LPN R L Sbjct: 371 AVKDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISAR 430 Query: 346 QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVL 405 + L +D + ++ G + + R + +++ + + ++ G E ++++ Sbjct: 431 SNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLI 490 Query: 406 SGPETEGR-----LQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQ 457 T+ + + + + + + GN+E++ LL Sbjct: 491 EEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRH 550 Query: 458 LSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKE 515 Q+ + + + + L +R A+ L LY Q + Sbjct: 551 ADLAMYQAKESGRN-GVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQLTSDHR 609 Query: 516 GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGP 573 G + ++ + G+++P +F+P+ + +L VLE+ K L + Sbjct: 610 PLGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNL 669 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 ++N+ + + + L + ++P + LE+TE S+ + + L Sbjct: 670 ILAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKAL 729 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 G ++A+DDFGTGY++ LK+L D IKID FV D+ T+ DA++V++I +LA ++ Sbjct: 730 GVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMN 789 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET+ Q L + G QG+L G+P P+ + Sbjct: 790 VIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDE 825 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 108/483 (22%), Positives = 208/483 (43%), Gaps = 22/483 (4%) Query: 268 AVSTLCLLNYNQNFLQGVETEYSLAF-ILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 VS + L+ + + + I+ V ++ V + +VR + H A Sbjct: 613 GVSEITGRIRELEALRKDGSMFPIELGIVEVQMAGEVNFIGVVRDITERKQRENEIHQLA 672 Query: 327 LTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRS 378 DPLTLLPN R L + L +DN + ++ G + Sbjct: 673 FYDPLTLLPNRRLLLDRLTEAINHSVRTRNFSALFFLDLDNFKNLNDSAGHNKGDLLLGQ 732 Query: 379 ICRTLLPLMQENEKLYQLPGSELLLVLSGPETE-----GRLQHMVNILNS---RQIHWNN 430 + L+ +++ + + +L G E +++ S E + + + + S R+ + + Sbjct: 733 VAERLVNSVRQGDTVARLGGDEFVIIASDLSHEPTLAANQAERLAQKIVSNLTREYNLDG 792 Query: 431 TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVL 490 + F+ + LL Q ++ + + + + + Sbjct: 793 LTYNSSASIGVTLFNSENLPKEDLLKQADMAMYKAKYAGRN-GVQFFDPQMQVSVSSRAS 851 Query: 491 LLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLS 548 +++ + +A+ +L+ Q N + G + +L + + G+++P +F+PL + L Sbjct: 852 IVSDLYSAIQSQQFVLFYQKQVNHLKQCIGVEVLLRWIHPEKGMVSPLQFIPLAEETGLI 911 Query: 549 ARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQA 606 VLE LA +K+ +VN+ + + N ++ K +PQ Sbjct: 912 VPIGEWVLEEACATLAKWSLESEKQHLSIAVNISVVQFSKDNFVQTVLNALKTSGANPQL 971 Query: 607 VILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVF 666 + LEITE +N +++L + G +IDDFGTGY++ LK+L + +KID F Sbjct: 972 LKLEITETLLANNIPDVKAKMKELQQHGVTFSIDDFGTGYSSLSYLKQLPINQLKIDQGF 1031 Query: 667 VKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQP 726 V+DI+ ++ D I +++ LA + L V+AE VET+ Q+ALL +G QGYL G+P Sbjct: 1032 VRDIINSSNDRAIAQAVITLADSIELQVIAEGVETEAQRALLQSMGCHTYQGYLYGKPCR 1091 Query: 727 LAD 729 + + Sbjct: 1092 IEE 1094 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 104/558 (18%), Positives = 206/558 (36%), Gaps = 31/558 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLL---------CTPYENDFIAGYLVPVFF 248 ++ A L E++ LA + + + L + A L+ + F Sbjct: 822 TKRKQAEAALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDALGYTAQELLALTF 881 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF---ILAVLISFSVCL 305 + + + + + L L + + + ++ + Sbjct: 882 TEISHPTERALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAILKVVLVRDAQGQPLHY 941 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS---------FCCLR 356 + V + + + A D LT LPN E ++ L Sbjct: 942 ISQVVDISDRKRMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAGQRWDYLCAVIVLD 1001 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQH 416 +D + ++ G ++ + +I L ++ ++ L +L G E ++L Sbjct: 1002 LDRFKVINDSLGHLVGDRLLSAIAERLQGCLRPSDTLARLGGDEFTILLDDIPNTAAATD 1061 Query: 417 MVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLA 473 + ++ + + + + LL ++ Sbjct: 1062 IAKSIHQTLESSFNLDGYEVFATASIGIALSGMGYHRAEDLLRDADTAMHRAKLQGTA-C 1120 Query: 474 LDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDG 530 + +SG+ Q+ L +R A+++ +L +Y QPI + + G++ ++ + Sbjct: 1121 YVMFDTAMSGRALAQLRLETELRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQ 1180 Query: 531 GIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQK 587 G+++P F+PL + L VL + L SVNL Q Sbjct: 1181 GMISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQT 1240 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 N+ +I ++ + ++P + LEITE +++S+ +E+L ++ IDDFGTGY+ Sbjct: 1241 NLIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYS 1300 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + RL + D +KID FV + + IV++I LA + VVAE +ET Q A Sbjct: 1301 SLSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQ 1360 Query: 708 LHKLGVQYLQGYLIGRPQ 725 L +Y QGY +P Sbjct: 1361 LRGRRCEYGQGYFFSKPL 1378 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 121/600 (20%), Positives = 233/600 (38%), Gaps = 37/600 (6%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWL 220 +++ + L F+ L LF L ++ A + + + K Sbjct: 333 ESLRALQSLGHQFSVALGRARLFDSLESLVEQRTSALKAEMAEKERAQEQLKLRNRAVDA 392 Query: 221 AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL-RYPFLNLTWAVSTLCLLNYNQ 279 + ++++ P Y P F I + + FL L ++ + + Sbjct: 393 SVNAIIIADKSEPDNPIV---YANPAFERISGYNLEDVTGRNFLFLLGNETSQLGVANIK 449 Query: 280 NFLQGVETEYSLA----------------FILAVLISFSVCLLYMVRIYHRSEWLNRRWH 323 L+ Y+L + + ++ S + Sbjct: 450 RALKSNTEGYALLKNYRKDGTLFWSELKVAPVTDAKGDVTHFVAILNDVTESIQYQAQLE 509 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 + D LT LPN L + G + +DN ++++ G Sbjct: 510 YKTKYDNLTGLPNRNLLNDRIQQAIAYAARRNKGFALAVFDLDNFKYINDSMGHETGDQL 569 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTG 432 + + +L ++E + L +L G E ++++ E + L M+N + S+ + Sbjct: 570 LTEVAESLRSCLREGDTLARLGGDEFVILMHKEECDRPLGLMLNRIQQLVSQPRRLKDKE 629 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + +F + E LL ++ + S + ++ K+V + Sbjct: 630 ILVTPSIGVCQFPEDGEDASTLLKNADTAMYKAKERGRNR-ICSYTQEMNESIQKRVQME 688 Query: 493 NTIRTALDQGDLLLYAQPIRNKEGEGY---DEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R ++ G+L LY QP + G G + ++ K D ++ P +F+P+ + L Sbjct: 689 QDLRRGIENGELELYYQPQLDPHGGGAVGLEALVRWRKGDR-MVPPLEFIPIAEETGLIT 747 Query: 550 RFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVI 608 D VL + L K+ SVNL P + ++ + +I P + Sbjct: 748 EVDAWVLRAACLQLKMWRDQKQQMVPVSVNLSPRQFQDAYCVELVRKVLQESNIEPGCLK 807 Query: 609 LEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVK 668 +E+TE NAE ++ + QL G ++++DDFGTGY++ LK D +KID FV+ Sbjct: 808 IEVTESMVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVR 867 Query: 669 DIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 ++ + +A I+R+I L K + +VAE VET +Q + L + G +QGY P P+A Sbjct: 868 NVTNDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVA 927 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 110/592 (18%), Positives = 208/592 (35%), Gaps = 30/592 (5%) Query: 160 ADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSW 219 + + LL+L L+ Y R+ P E++ ++ Sbjct: 131 SLQPVLIKTLLALIGGALVGA---YAFFRLRTVP---LRALDEAYRVLKQSEEKYRSVYE 184 Query: 220 LAALSVLLLLLCTPYEN--DFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNY 277 + L + D + + P +F + L + C Sbjct: 185 SLNEGLALYRASRREDGSADLVLTDVNPAAINVFGFSRDDIGGWITELLDGLFAECAEQV 244 Query: 278 NQNFLQGVETEYSLA-------FILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDP 330 E L F L + ++ + + A D Sbjct: 245 FGALQARGEVSLDLEQNSTGRIFSLTAFPMGYGMVATLLEDVTEKKRTAEQLERLAYYDS 304 Query: 331 LTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRT 382 LT L N R L EQ + + ++ + ++ G + + + Sbjct: 305 LTGLLNRRMLLDRMEQAIGTAQREGVKVATLFMDLNGFKVINDTLGHKAGDQILVEVAKR 364 Query: 383 LLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQ--IHWNNTGLDMGYGAA 440 L ++++ + L +L G E ++ + + E N++N+ + + +G Sbjct: 365 LQKMVRKRDTLARLGGDEFVVAATFEKDENASAIAKNLINAITPVYQVCDREVYVGVSVG 424 Query: 441 WGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD 500 F + + + LL + + ++ + +++ L +R A++ Sbjct: 425 ISIFPDDGDVPETLLKNADIAMYNAKSQGQG-GFCFYSAQLNERLHERMQLEFKLRGAVE 483 Query: 501 QGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + + L QPI + + +L + G + PD F+PL + VL Sbjct: 484 REEFFLEYQPILDSKTGRITAVEALLRWNDPEKGRVMPDSFIPLAEDTGVILPLGEWVLR 543 Query: 558 SLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 + L R +VN+ Q +++ + + + P + LE+TE Sbjct: 544 TACAKLRQWQDAGVMPVRMAVNISGRQFTQGDLSKTVEDALLQSGVHPSWLELELTETCL 603 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N E ++ + +L I+IDDFGTGY++ + LK D +KID F+ ++ D Sbjct: 604 IKNVEETVRKLCRLKGLCVSISIDDFGTGYSSLQYLKNFPIDHLKIDRGFINNVCELPDD 663 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IV +I +AKA L V+AE VET+QQ L + G QGY RP P Sbjct: 664 RAIVDAIIGIAKAMDLHVIAEGVETRQQAEHLMRRGCDEFQGYYFYRPLPEE 715 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 123/644 (19%), Positives = 237/644 (36%), Gaps = 30/644 (4%) Query: 114 YGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL--S 171 + R F + L+ +G + + + ++ G D L Sbjct: 59 DNPEPQEQKNRNFRVTLIILLGKYLWIAGILASVVMSEAVTAAMGLLFKGEVTYDYLATG 118 Query: 172 LFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLC 231 + A+ + ++ + +M Q ++ E+R TL +A+ ++L+ Sbjct: 119 MVAALFVSAIMVTAIMKMEELERRRQEEVAKN-RALRASERRYRTLIEVASDAILVTDSE 177 Query: 232 TPYENDFIAGYLVPVFFIIFTLGVGKLRYP----------FLNLTWAVSTLCLLNYNQNF 281 T D + + L +L + + Sbjct: 178 TGTLVDCNRQAETLLGMSRNEIIGRHLCNLQQTGNDADGAETDLLGHMLRGKTGTIELSL 237 Query: 282 LQGVETEYSLAFILAVLI-SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--- 337 ++ T + + + R + R A DPLT LPN Sbjct: 238 VRADGTTVPVEVSSSTFEMDGRRYVHGAFRDITQRREAEDRIKHLAHHDPLTNLPNRVFL 297 Query: 338 -----RALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK 392 +A+E A ++ + + +DN + ++ G + + + L + ++ Sbjct: 298 HGRLEQAIELARREQNQVAVMFIDLDNFKRINDTLGHRIGDALLEQVAARLTENVPGSQV 357 Query: 393 LYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQE 449 + +L G E ++V++G M + R + L G + + Sbjct: 358 VGRLGGDEFIVVITGNRVSTTSAAMAERILESLCRPYTVEDYQLHSGASIGIAIYPADGN 417 Query: 450 TLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQ 509 + + L+ + + + + ++ +++ + N +R AL G L+ Q Sbjct: 418 SAETLMKHADAAMYHAKSRGRN-TFEFFSQAINRGVRERLDIENGLRDALKHGGFKLHYQ 476 Query: 510 PIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH 566 P + + +L G++ PD+F+P+ + L L V++ L Sbjct: 477 PQIDLTTGSICSVEALLRWRHPLLGVIAPDRFIPIAEETKLILPLGLWVIDRACHQLRAW 536 Query: 567 PCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 D G R +VN+ L ++ + + +R+ +S + LEITE N Sbjct: 537 RNDGIAGVRMAVNVSVKQLQDESFFEALGSIVERHGLSGSDIELEITESAIMENLSRVQA 596 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 ++ L +G ++IDDFGTGY++ RLK L +KID FV DI T+ +A I I Sbjct: 597 LLKSLQDYGITLSIDDFGTGYSSLGRLKLLPIQSLKIDRSFVHDIETDHGNAKICDGIIA 656 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L + L ++AE VET Q+ LL G +QG+LI +P P D Sbjct: 657 LGHSLGLKIIAEGVETDAQKNLLQNSGCDAIQGFLIAKPLPADD 700 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 90/433 (20%), Positives = 177/433 (40%), Gaps = 16/433 (3%) Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEF 362 + H QA D LT LPN + +E + + +D + Sbjct: 241 DITDRKMAENSLHYQAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKN 300 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI-- 420 ++ G + + S + L ++ ++ L + G E +++ + E ++ Sbjct: 301 INDTLGHTLGDELLGSFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVF 360 Query: 421 -LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + N L + + + + + ++ ++ Sbjct: 361 SILQQPFQVGNHLLYLKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNH-YQIYHP 419 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 +++ +T++++ + N + AL++ LL+ QP N + G + ++ G+++P Sbjct: 420 LITSKTSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPA 479 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 KF+P+ + L VL + R +VNL Q N + + Sbjct: 480 KFIPIAEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTK 539 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + ++ PQ + LEITE N E S + L G I++DDFGTGY++ LK++ Sbjct: 540 ILAETNLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQI 599 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + IKID F+KD+ D I+ ++ + + ++ V+AE VETQ Q LL KL + Sbjct: 600 PFNTIKIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEE 659 Query: 716 LQGYLIGRPQPLA 728 +QG+ +P Sbjct: 660 MQGFKFSKPLKPE 672 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 115/553 (20%), Positives = 207/553 (37%), Gaps = 26/553 (4%) Query: 200 WRRDIAPSLGKEKRAFTL---SWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF--- 248 W R I ++ R ++ +L+ ++ + GY V Sbjct: 290 WLRTIQQLRRRDARMRLATSVFASSSEGILIANPNDEVIGINPAVTALTGYSVQELLGRP 349 Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCL 305 + F + ++++S + + +A + + C Sbjct: 350 VSFLAPEQTVAESRRQASFSISEKGVWQGEALIKHKQGYTFPVALTITTVTGEDGRVECY 409 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL----EQAPEQEAGKSFCCLRIDNLE 361 + + R H A TD LT LPN +L E+ L +DN + Sbjct: 410 INTFSDISERKANEARIHDLAHTDTLTGLPNRMSLYSGLEERLANVQPIGVMILDLDNFK 469 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 ++ G + + + R L+ + E + +L G E ++VL P+ + + + Sbjct: 470 IINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEFVIVLDCPQATQIVGRVAKEV 529 Query: 422 N---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 ++ L G + LL + + + Sbjct: 530 LQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDTAMYAAKSSGKN-NFKFFT 588 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 E + Q +++ + N +R A+ + + L+ QP + G + ++ + G++ P Sbjct: 589 EKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHP 648 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRII 594 +KF+ + + NL VL + ++ SVN+ L + + I Sbjct: 649 EKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLID 708 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 L + I P + LEITE + E ++ +++L G +AIDDFGTGY++ LK Sbjct: 709 NLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKL 768 Query: 655 LQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQ 714 L +KID FVKDI T+ DA I + LA+ L +VAE VET+ Q L G Sbjct: 769 LPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCD 828 Query: 715 YLQGYLIGRPQPL 727 QGY +P P Sbjct: 829 SAQGYYFSKPLPA 841 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 106/465 (22%), Positives = 195/465 (41%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF-- 337 + Y ++ L + + + + R A DPLT LPN Sbjct: 317 RKGGQWYPAELSISALRDEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPLTRLPNRSR 376 Query: 338 --RALEQAPEQ----EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 +L++A + + + + +D + ++ +G + + I L ++ E Sbjct: 377 LTASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERG 436 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 L +L G E L++SG ++ +L M + + + + + + + F + Sbjct: 437 MLARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDG 496 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + LL ++ + ++ QT +++LL N +R AL++ + L+ Sbjct: 497 RDARTLLKNADVAMYRAKEAGKN-TYQFFDIGMNTQTFERLLLENGLRMALERHEFELHY 555 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L G++ P +F+ L + L VL + LA Sbjct: 556 QPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAA 615 Query: 566 HPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 PR +VNL P Q ++ ++ + ++ + LEITE + ++ Sbjct: 616 WDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAV 675 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + +L G ++IDDFGTGY++ LKR D +KID FV+ + + +A I +I Sbjct: 676 SLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAIL 735 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AK VVAE VE+++Q A L G LQGY GRP P + Sbjct: 736 AMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGE 780 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 100/553 (18%), Positives = 204/553 (36%), Gaps = 29/553 (5%) Query: 204 IAPSLGKEKRAFTLSWLAALSVLLL---LLCTPYENDFIAGYLVPVFFIIFTLGVGKLRY 260 E+R + + + Y + + Sbjct: 154 EQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQSLNNIAQQ 213 Query: 261 PFLNLTWAVSTLCLLNYNQNFL-------QGVETEYSLAFILAVLISFSVCLL---YMVR 310 ++ + L L+ + + + ++ + + + LL V Sbjct: 214 LYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGKLLYFEGTVE 273 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEF 362 + N QA D LT LPN ++ + + + +D + Sbjct: 274 DITERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQAISYADRTASKLAVVFVDLDKFKD 333 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + ++ R L +++++ + + G E +L+LS L + + Sbjct: 334 INDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVLLLSNIHGMDALSQTLQRVL 393 Query: 423 ---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 S + + + +T + LL ++ Sbjct: 394 ALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAMYKAKQEGKN-NFQFYTR 452 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPD 536 ++ +++ + +R AL + L+ QP N G + ++ G+++P+ Sbjct: 453 ELNSILVERLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEALIRWHNPRQGLISPN 512 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKW-LATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ + +L + VLE +A SVN+ P Q N+ G I R Sbjct: 513 RFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVSPRQFQQSNLVGNISR 572 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + P + LEITE + + + L G ++AIDDFGTGY++ LK Sbjct: 573 VLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAIDDFGTGYSSLGYLKHF 632 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D +KID FV + ++T + I+++I L +++VAE VET++Q+ L +G Sbjct: 633 PIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVETERQRDFLLSIGCDE 692 Query: 716 LQGYLIGRPQPLA 728 +QG+L +P P Sbjct: 693 MQGFLFSQPLPFD 705 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 102/462 (22%), Positives = 184/462 (39%), Gaps = 22/462 (4%) Query: 289 YSLAFILAVL-ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA---- 343 L F+L L + + + H A DPLT L N + L Sbjct: 119 VPLEFVLQYLSFGEDDYFVILGKDISERRHAESTIHTLAFFDPLTHLANRQLLHDRMAQA 178 Query: 344 ----PEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + + +DN + ++ G + + + + + +++E + L ++ G Sbjct: 179 LAKSQRHHKVGALLMIDLDNFKALNDTKGHHIGDELLIQVAQRIQTIVREGDTLARISGD 238 Query: 400 ELLLVLSGPETEG-----RLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETL 451 E +++L G E + L + F+G ++ Sbjct: 239 EFVVLLEGLAHEESKAAQEAEKFATRVKYLLNEPYELLGYEHTCSSSIGIALFNGQPKSK 298 Query: 452 QPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI 511 + LL Q Q+ + + ++ + + + +R AL + +L+L+ QP Sbjct: 299 ETLLKQADIAMYQAKEKGRNR-ICFYDPLMQENIEHKTTMEHELRMALSKEELILFYQPQ 357 Query: 512 RN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD 569 N + G + +L G++ P+ F+PL + L VL + L+ D Sbjct: 358 VNLEGKIVGVEALLRWNHPQKGLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKD 417 Query: 570 KK--GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNI 627 S+N+ + + + ++ LE+TE + ++ I Sbjct: 418 FPHQPLHLSINVSAKQFQEASFYETVANAIALSGSDAGSIKLELTESLILDSIHETIAKI 477 Query: 628 EQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLA 687 E L G ++DDFGTGY++ LKRL D +KID FV+DI + DAMIV++I ++A Sbjct: 478 EALRLLGVGFSLDDFGTGYSSLSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMA 537 Query: 688 KAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VE ++Q L + G QGYL G+P P + Sbjct: 538 HNFDLDVIAEGVEDKEQFNFLMENGCGLFQGYLFGKPMPPEE 579 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 99/465 (21%), Positives = 186/465 (40%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + ++VL + + + R A D LT LPN Sbjct: 154 RKSGEHFPCWVNISVLQDGQGEISHFVALFTDISERKEQEARVQHMAEYDALTDLPNRVL 213 Query: 340 LEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + Q + + +D+ + ++ G ++ + R L ++ + Sbjct: 214 VNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLD 273 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +L+L G + + + L +G + Sbjct: 274 TVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDG 333 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 +Q LL + AH ++ Q +++L+ N +R A++Q L L Sbjct: 334 SDIQTLLMNADLAMYHAKAHGRN-TFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVY 392 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + +L D G++ P +F+P+ L VL+ + + Sbjct: 393 QPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASL 452 Query: 566 H-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + R +VN+ L++ + + +R+ + + LE+TE ++A+ + Sbjct: 453 WLRAGLEPMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLAS 512 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + + G R+AIDDFGTGY++ LKR D++KID F+ D+ + +A IV +I Sbjct: 513 RQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIV 572 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 LA A + +AE VE + QQ L LG + +QGYL+G P + Sbjct: 573 HLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPL-AEE 616 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 139/733 (18%), Positives = 249/733 (33%), Gaps = 62/733 (8%) Query: 55 ILFIFGWRGVVPVLCGMFCTNLWNFHL-SFLQTAVMLGSQTFVVLCACAILRWQLGTRWR 113 +L F P+L G +LW + + + + + Sbjct: 112 MLLHFD-AAHPPLLAGSADISLWLSSWARVAEVITLWFTAMRLSAPGLGRTWLAVACAIT 170 Query: 114 YGLTSRYVWQRLFWLGLVTP---------------IGIKCSMYLVGSFFDFPLKISTFFG 158 + + W V I + D P + + Sbjct: 171 LAIVGLSLGPLPGWFAQVAGSALHQPLALALALALIVAATVLQRSARRNDQPRERILAWA 230 Query: 159 DADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW----RRDIAPSLGKEKRA 214 + + +L + + L + R+I Q ++ RR A E R Sbjct: 231 TMAFACGEITVGALGVHGSVASPL-AHGLRVIAYALLYQAVFDAGIRRPFARIQEAESRL 289 Query: 215 FTL-SWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIF----TLGVGKLRYPFLNLTWA- 268 S LA + + + + D + + PVF VG+ + A Sbjct: 290 RESESRLARVVSAMPDMVFLKDADGVYLSVNPVFERFIGRPEHQIVGRNDFDLTTPAQAR 349 Query: 269 ----------VSTLCLLNYNQNFLQGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRS 315 + L+ + I + +L + R Sbjct: 350 QFRQNDQRAMQTRQPLVYEETLTFAEDGYQGRFETIKTPIRDLHGRVTGVLGVCRDITER 409 Query: 316 EWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHY 367 + + A D LT LPN R + + + +DN + ++ Sbjct: 410 KRAAQEIERLAFYDALTGLPNRRLLLDRLQRSIATCQRTHKLGALLFIDLDNFKDLNDTL 469 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN 422 G M + + L+ ++ + + + G E +++L + + + + L Sbjct: 470 GHDMGDQLLAQVATRLVASVRAADTVARFGGDEFVVMLEALAPDLRTATAQAEMVADKLL 529 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 + + + F + ++ LL + Q+ A + Sbjct: 530 ASLNQPFALDGGQHYSTLSIGVTLFGEQRLSVDELLKRADLALYQAKAAGRNTQ-RFFDP 588 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDK 537 + + L +R L + +LL+Y QP+ + G + ++ G++ P Sbjct: 589 DMQAAVNARSNLEADLRQGLARAELLVYYQPVVDHQARLMGAEALVRWRHPQRGMIGPAD 648 Query: 538 FLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIR 595 F+PL Q L VL++ L G SVN+ Q +++ Sbjct: 649 FIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQFRQPGFVAQVLH 708 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 K + P+ + LE+TE + E ++ + QL G A+DDFGTGY++ LKRL Sbjct: 709 QLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSLSYLKRL 768 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 D IKID FV++++ + DA IVR+I LAK+ L VVAE VET Q + L G + Sbjct: 769 PLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQLHGCEG 828 Query: 716 LQGYLIGRPQPLA 728 QGYL GRP P+ Sbjct: 829 FQGYLFGRPVPME 841 >UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488U0_COLP3 Length = 788 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 135/720 (18%), Positives = 253/720 (35%), Gaps = 63/720 (8%) Query: 51 VMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGT 110 V++S+ +F G+VP L H+ V C Sbjct: 74 VLISLCGLF--FGLVPTLIAGAMMVSLRLHIGGAGILVGSLCVIIPGSIGCL-------- 123 Query: 111 RWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLL 170 + + + +L W L G+ + ++G P + A + Sbjct: 124 ---FAIILKRKNLKLDWFKL-YSFGMLIQITVLGCMLLMPEHLRYKVIGAV-------IQ 172 Query: 171 SLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLL--- 227 + + ML + R ++ ++ L + Sbjct: 173 PVIVVFPVCTMLVGLILRRQRDRRKSEYDLTESQKLLNREQSLMRGLIGSLPDLISFKDV 232 Query: 228 ---LLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN---F 281 L C F+ + + G + + + Sbjct: 233 QGRYLGCNHAFEQFVGLTEQELKGKMDQELKGNFKPSDIAGLDEQEIIASGKVYSQDEWV 292 Query: 282 LQGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + ++ I F L+ + R + + A D LT LPN R Sbjct: 293 VYPDGSKVLHETIKKTFDGFDGTRYGLMSVSRDITERKNHEDQIQRLAFYDSLTQLPNRR 352 Query: 339 ALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQEN 390 L+ E + + +D+ + ++ G M + ++ + +++ Sbjct: 353 MLQDRLQLLVTTSARDERFNALFFIDLDHFKTLNDTQGHNMGDQLLIAVAARIQDSVRDE 412 Query: 391 EKLYQLPGSELLLVLSGP-ETEGRLQHMVNILNS-------RQIHW---------NNTGL 433 + + +L G E + ++S E E H+ + + N Sbjct: 413 DIVARLGGDEFVALISNLGEDEATAGHVAEKVAEKIRLSICQPYKLSIKENVDANNEMIF 472 Query: 434 DMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLN 493 F N + +L Q Q+ A A+ + + + +L Sbjct: 473 HCTPSIGISLFKSNLTSPDEILKQADVAMYQAKAAGRN-AIRFFDPAMQIALEENAAMLA 531 Query: 494 TIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARF 551 + A+D G+L L+ Q ++ +G + +L G+++P F+P+ + L Sbjct: 532 ELHQAIDNGELELFYQIQIDETKGIQGAEVLLRWFHPIRGMVSPLDFIPMAEESGLIIPI 591 Query: 552 DLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VLES L +++ + SVN+ L Q+N + + +I+P + L Sbjct: 592 GRWVLESACHQLKVWENIPNRENWQISVNVSALQFQQENFVEIVQEIILSNNINPHGLKL 651 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE N + + + QL++ G ++DDFGTGY++ LKRL +KID FV+D Sbjct: 652 ELTESMVLDNVDIIIEKMHQLNQLGIDFSMDDFGTGYSSLSCLKRLPLKQLKIDQSFVRD 711 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 I T+ DA IV++I +L+ + V+AE VETQ+Q+ L G QGYL RP P+A+ Sbjct: 712 ITTDPDDAAIVQTIINLSNSLKYDVIAEGVETQEQRQFLFNNGCSQYQGYLFSRPVPIAE 771 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 113/578 (19%), Positives = 204/578 (35%), Gaps = 37/578 (6%) Query: 187 TRMIVSPHFAQIL--WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGY-- 242 R+ ++ R A ++ A SW + ++ L P Sbjct: 119 YRVNYIFRSSRAFRDLRTSEARLSKAQQLARMGSWEWNPLLDVVQLSEPCRQIMGIDSAT 178 Query: 243 ----LVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL 298 + + + LG LR L L L + + L Sbjct: 179 QVRDIASLIALAHPLGRPYLRKGLDALMERGRPLSLDCQTATADEEDKRFIHLEAEEHRD 238 Query: 299 ISFSVCLL-YMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAG 349 S + L+ ++ + + A D LT LPN ++ + Sbjct: 239 ASGRITLVSGTIQDITSRKLAEEKIRYLAYYDSLTGLPNRVLFKEHLRRALATSEQHKRQ 298 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL------------YQLP 397 + L +D + ++ G ++ + L ++ + + +L Sbjct: 299 LAIMLLDLDRFKGINDSLGHDAGDLLLQQVADRLRLRVRPYDTVSRDSEEQRDSLIARLG 358 Query: 398 GSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPL 454 G E ++L G T + + N + + + + L+ L Sbjct: 359 GDEFTILLEGITTPEAAARVARRVIEALEAPFALNGNEVFISCSIGISIYPHDGTDLEIL 418 Query: 455 LGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN- 513 + + + ++ + ++++L +R A ++ + L+ QP + Sbjct: 419 VKNADVAMYCAKDLG-CSTFQFYTQEMNSVSLQRLILETHLRKAFEKEEFFLHYQPQIDC 477 Query: 514 --KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK 571 G + + + G+++P F+PL + L D VL ++ K L Sbjct: 478 VTNRIIGLEALARWNNPELGLVSPGSFIPLAEETGLIIALDRWVLATVCKQLEAWQAAGI 537 Query: 572 GP-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQL 630 R +VNL L+ N+ I ++ R + + LEITE NAE + + L Sbjct: 538 PLVRVAVNLSARHFLKANLNKTIQQIRSRGAAARDHLDLEITEGMLMENAEEVVSVLGML 597 Query: 631 HKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAK 690 + G I+IDDFGTGY++ L RL +KID F+ N A +V +I LA + Sbjct: 598 QETGVNISIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQSGDNVESASVVTAIIALAHSL 657 Query: 691 SLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET Q L + G + +QGYL RP P Sbjct: 658 GKEVVAEGVETSTQLQFLKENGCRVIQGYLFSRPLPED 695 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 98/488 (20%), Positives = 175/488 (35%), Gaps = 19/488 (3%) Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVC---LLYMVRIYHRS 315 + E ++ ++ + + R Sbjct: 324 HRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTIARDITER 383 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHY 367 + + QA D LT LPN LE S L IDN + ++ Sbjct: 384 KHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDNFKRINESL 443 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR--- 424 G +R + L ++ + + + G E +VL + +++ + + Sbjct: 444 GHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAILHKVRAAFET 503 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 + + + + + + + LL +S A ++ + Sbjct: 504 PLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNR-YQFYAPEMNAR 562 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 + + L +R ALD+G+ L+ QP + G + +L G++ P F+PL Sbjct: 563 GQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPL 622 Query: 542 IAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L VL + R SVN+ + + ++ ++ + Sbjct: 623 LEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQVEQVLREE 682 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + P + LEITE A + ++ + L G R+AIDDFGTGY++ LKR D + Sbjct: 683 CMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDAL 742 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID F++D + A I + L L VVAE VET +Q A L + +QG+ Sbjct: 743 KIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFH 802 Query: 721 IGRPQPLA 728 RP P Sbjct: 803 FSRPLPAD 810 >UniRef50_Q220B0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B0_RHOFD Length = 701 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 97/468 (20%), Positives = 184/468 (39%), Gaps = 22/468 (4%) Query: 283 QGVETEYSLAFILA-VLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE 341 + + + ++ ++ ++ + + +V + + A D LT LPN R L Sbjct: 225 RRDGSVFPISVSVSELMHNGQTQFIGLVHDITQRRRSEENIYRLAFYDKLTGLPNRRLLM 284 Query: 342 QAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKL 393 + L +D+ + ++ +GL ++ + + L +++++ + Sbjct: 285 DRLKQALITSTRTGQHGALILLDLDHFKQINETFGLDAGDELLQQVGQRLPTCVRDDDTV 344 Query: 394 YQLPGSELLLVLSGPETE--------GRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFD 445 + G E +++L ++ + + + ++ F Sbjct: 345 SRFGGDEFMVMLEALSSQPQEAAIQAEAIAQKILLALAQPYRLRGHTHGTTPSIGVVMFR 404 Query: 446 GNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLL 505 Q +L LL Q+ A + + + + L +R L + + Sbjct: 405 QAQVSLDDLLKMTDVAMYQAKAAGRN-TVRFFDPALQALALARTALEENLRRGLALQEFV 463 Query: 506 LYAQPIRNKEG--EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 L+ Q + +G G + +L G++ P +F+PL + VLES + L Sbjct: 464 LHYQIQVDHQGLPTGAEALLRWQHPVRGMVPPAQFIPLAEETGFILPLGQWVLESACRQL 523 Query: 564 ATH--PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAE 621 +VN+ L Q + + + +P + LE+TE + + Sbjct: 524 VAWSHQRATGSWTLAVNVSALQFAQPDFVAHVTSALQATSANPTLLKLELTESMLVGDVQ 583 Query: 622 SSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVR 681 + + L G A+DDFGTGY++ LKRL D +KID FV+D++ N DA+I + Sbjct: 584 DVITKMNALKAQGVSFALDDFGTGYSSLSYLKRLPLDQLKIDQSFVRDLLINPNDAVIAQ 643 Query: 682 SITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +I L L V+AE VET Q L +G QGY GRP P A+ Sbjct: 644 TIVALGHNLGLQVIAEGVETVGQHDYLASIGCDAFQGYYFGRPVPAAE 691 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 91/475 (19%), Positives = 184/475 (38%), Gaps = 25/475 (5%) Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 V + + + + + + + ++Y+ + + + QA Sbjct: 345 VRETVRRHCDGRLIPVSMIGFPIE-----IAGETQGIVYIYQDISERKAFEEQITHQAFH 399 Query: 329 DPLTLLPNFRALEQAPEQE---------AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSI 379 D LT LPN E+ + + + ++ + ++ G + + Sbjct: 400 DALTGLPNRSLFADRLERALTRARRRGDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEV 459 Query: 380 CRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMG 436 R L ++ + + +L G E ++L +T+ + +V + + + Sbjct: 460 ARRLSGCVRSMDTVARLGGDEFAVILEEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPE 519 Query: 437 YGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIR 496 + LL ++ + + + + + + L +R Sbjct: 520 ASIGIVLHTRDYAAADDLLRDADIAMYRAKEQGRASMI--FDRKMHQEILEAISLETDLR 577 Query: 497 TALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDL 553 AL+ G+LLL+ QPI + G++ ++ D G++ P +F+PL + L Sbjct: 578 QALEAGELLLHYQPIVDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGR 637 Query: 554 QVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILE 610 V++ + L + SVN+ ++ + + ++ + P + LE Sbjct: 638 FVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLE 697 Query: 611 ITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDI 670 ITE +AE + + +L G +IAIDDFGTGY++ L++L D +KID F+ Sbjct: 698 ITESVLMHDAEHTARELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQ 757 Query: 671 VTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 + IV+SI LA++ L+V+AE VE Q L QG++ RP Sbjct: 758 GCDGESQEIVKSIISLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSRPV 812 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 127/704 (18%), Positives = 240/704 (34%), Gaps = 57/704 (8%) Query: 73 CTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVT 132 ++ W L + + + A L++ +FW G Sbjct: 12 VSSFWIELLFTVVIMSLALFIRLAIAPVDAGLQYVTFFPAI-------TLAAIFW-GCRA 63 Query: 133 PIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNML-FYYLTRMIV 191 + ++F P +F + I +L+ L +L+ + + R Sbjct: 64 GLLAMAMGVGFATYFFIP-PFYSFENEGLKIMAWSNLVFLVDGLLVSFSIEAMHRYRKKS 122 Query: 192 SPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYEND--FIAGYLVPVFFI 249 A+I +L E LL+ D I + + Sbjct: 123 EVELAEIKLAHSQVSTLNSELDEMLHKQRETEQELLISATAFEAQDGIMITDSKGVILRV 182 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNF--------------------LQGVETEY 289 + L ++ +F + Y Sbjct: 183 NQAFTDITGYSSEEAVGQTPRLLKSGRHDADFYAAMWQCIKNTGQWSGEIWDRRKNGEIY 242 Query: 290 SLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------R 338 + + SF + + R H A DPLT LPN Sbjct: 243 PKWLTITEVKSFDGSVVHYVSSQVDITARKASEDRIHNLAFYDPLTQLPNRRLLLDRLRH 302 Query: 339 ALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 ++ + + + +D + ++ G + ++ + L ++ + + +L G Sbjct: 303 SVSFSLRDGRHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDTVARLGG 362 Query: 399 SELLLVLSGP-----ETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQET 450 E +++L G E + + + + + G FD + +T Sbjct: 363 DEFVVLLDGLAGNLHEAAAQAKQIGRKIIDTLNQSYDLAGHEYQSGASIGIALFDEHCQT 422 Query: 451 LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQP 510 + LL Q Q+ L + + +V L + AL Q + QP Sbjct: 423 AEDLLKQADIAMYQAKKAGRN-TLRFFDPEMQASILARVALEKDFKDALLQEQFYICYQP 481 Query: 511 IRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH-- 566 + + G + ++ GI++P F+PL + L VL++ + L+ Sbjct: 482 VISREGRVAGAEALVRWRHSIRGIVSPADFIPLAEETGLIVPLGNWVLKTACRQLSDWSS 541 Query: 567 PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYN 626 D + +VN+ L Q++ ++ L + +P+ + LE+TE S+AES + Sbjct: 542 RDDTRDLTIAVNVSARQLKQEDFVTTVMGLIEETGANPRRLKLELTESMLVSDAESIIVK 601 Query: 627 IEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDL 686 + L + G A+DDFGTGY++ L RL D +K+D FV++I T +I + +L Sbjct: 602 MNLLKEAGITFALDDFGTGYSSLAYLSRLPLDQLKVDQSFVRNIETEDSAVVICAATINL 661 Query: 687 AKAKSLSVVAEFVETQQQQALLHK-LGVQYLQGYLIGRPQPLAD 729 A L VVAE VE + Q+ L +LQGYL +P + + Sbjct: 662 AHNLKLKVVAEGVENEAQRYFLSSVHQCDFLQGYLFSKPVAIDE 705 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 109/555 (19%), Positives = 211/555 (38%), Gaps = 31/555 (5%) Query: 198 ILWRRDIAPSLGKEKRAFTLSWLAALSVLLL-LLCTPYENDFIAGY-------LVPVFFI 249 RR + + S ++ +L + I GY L P F Sbjct: 527 TSLRRAERELMLSAQVFEHGSEAVFITDASHRILRVNPAFEAITGYAAGEVLGLTPDFRC 586 Query: 250 IFTLGVGKLRYPFL----NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL 305 + + G + + W +C +++ E+S ++ + Sbjct: 587 VSSPGGTSISQRWELAEQTGRWQGEIVCRRRSGEHY-----YEWSALSVVRHANGSVLYF 641 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-----EQEAGKSFCCLRIDNL 360 + + R A DPLT LPN L + + +D Sbjct: 642 IGQFSDISAVKAAEARALRLACFDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRF 701 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + ++ + R L+ ++ + + + G E +LVL G L+ + Sbjct: 702 KNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQ 761 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 L S I + L + F + LL + + Sbjct: 762 LLADVSSPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRHADAALYHAKSRGRN-TYRFF 820 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMT 534 + + ++ + + + +R+AL++G+ L+ QP + G + +L + G+++ Sbjct: 821 TREIDDRVSEYLHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMIS 880 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+P+ + L + V+ + + +VNL + + I Sbjct: 881 PVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSRS-VIEAI 939 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + P+ + +E+TE + + + +E L G +A+DDFGTGY++ LK Sbjct: 940 DEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLK 999 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 R D +KID F++DI + + +IV +I +A + V+AE VET+ Q L + G Sbjct: 1000 RFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGC 1059 Query: 714 QYLQGYLIGRPQPLA 728 +QGYL+ RPQP A Sbjct: 1060 DEVQGYLVSRPQPAA 1074 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 98/548 (17%), Positives = 198/548 (36%), Gaps = 26/548 (4%) Query: 206 PSLGKEKRAFTLSWLAALSVLLLL--LCTPYENDFIAGYLV-----PVFFIIFTLGVGKL 258 + TL VLL L N A L + + + Sbjct: 370 ELGAARAQFETLFEQLPEGVLLFDESLAVITHNREAANLLEYASDALLLLQVSDIEAMDD 429 Query: 259 RYPFLNLTWAVSTLCLLNYNQNFLQGVET--EYSLAFILAVLISFSVCLLYMVRIYHRSE 316 + + + N+ + + ++ + L + + + R + Sbjct: 430 QNAIAARKEKLQLTGIDNFESRYRTRSGRLMDVDVSVQVVQLPNGRIAFQTLFRDITEQK 489 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 + + A D LT LPN R L+ ++A + L +D+ + ++ G Sbjct: 490 QTSAQIEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLALMYLDLDHFKDVNDSLG 549 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQ 425 ++ + L ++ ++ L ++ G E +L+L+G + + + S+ Sbjct: 550 HGAGDVLLQIVAERLQGCVRADDTLARMGGDEFVLLLNGVNGADDVASIAGKIIHELSQP 609 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + N L + + LL Q+ + + Q+ Sbjct: 610 MRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQGRA-TYRFYTQALHDQS 668 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLI 542 ++V L +R AL++ + LY QP + G + ++ G ++P +F+P+ Sbjct: 669 VERVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEALIRWNHPGMGQVSPARFIPIA 728 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTL-LQKNIAGRIIRLFKRYH 601 Q L V++ + S N+ + + Sbjct: 729 EQSGLIIDIGNWVMKQACHQAKRWHDQGWDIKVSFNVSARQFMRSGELMQSLRDALAESG 788 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + P + +E+TE + + + ++ G ++A+DDFGTGY++ L+R I+K Sbjct: 789 VDPTRMEVELTESLLL-DPQGMGEILHEIRALGIQLALDDFGTGYSSLSYLRRFPISILK 847 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV N DA +V++I +A +S++AE +ET Q+ +L G + QGY Sbjct: 848 IDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQGYHY 907 Query: 722 GRPQPLAD 729 P P + Sbjct: 908 SCPVPATE 915 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 96/446 (21%), Positives = 174/446 (39%), Gaps = 19/446 (4%) Query: 298 LISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAG-------- 349 L ++ M + + L D LT LPN L EQ Sbjct: 953 LADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKRKQQQPNY 1012 Query: 350 -KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP 408 + + +D + ++ G ++ +++I L ++ + + + G E +++L Sbjct: 1013 LFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEFVILLEDL 1072 Query: 409 ETEGRLQHMVNILNSRQ---IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQS 465 M + ++T L+ +S Sbjct: 1073 TIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNADIAMYRS 1132 Query: 466 CAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEI 522 + ++ Q T+ + L +R AL++ + ++Y QPI N+ G++ + Sbjct: 1133 KEAGRAR-YTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRNLLGFEAL 1191 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK---KGPRFSVNL 579 + + + G+++P F+P+ + L VL + + + R SVNL Sbjct: 1192 VRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNL 1251 Query: 580 MPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAI 639 L Q N+ RI + + + + LEITE +N E + Q+ +++I Sbjct: 1252 SGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSI 1311 Query: 640 DDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFV 699 DDFGTGY++ L L D +KID FV + + IV +I LA + VVAE V Sbjct: 1312 DDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGV 1371 Query: 700 ETQQQQALLHKLGVQYLQGYLIGRPQ 725 ET+Q L +LG ++ QGY +P Sbjct: 1372 ETEQHLRQLQQLGCEFGQGYFFSKPL 1397 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 647 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 124/673 (18%), Positives = 224/673 (33%), Gaps = 29/673 (4%) Query: 81 LSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGL-TSRYVWQRLFWLGLVTPIGIKCS 139 F + R WR T G++ + Sbjct: 179 WGFTYVTLRFPDALASARLPLLTQRGYAYELWRTAPDTGERQSIEASGNGVLDAPVERTL 238 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 G + I+ + F L + L Y + + + Sbjct: 239 ELPNGQWTLSVAPINGWGQSDRLGFEATINFFLSLLMAYLAWLLYEMR--VRDQGLEVQV 296 Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVP------VFFIIFTL 253 R + + TL + + L L Y +P + I L Sbjct: 297 NERTAEILATQRQLQATLGAIPDPLLELGLDGRCYNAHSSRTDSLPWPTEDLIGRTIMEL 356 Query: 254 GVGKLRYPFLNLTWAVST--LCLLNYNQNFLQGVETEYSLAFIL-AVLISFSVCLLYMVR 310 + L + + L + ++ + L L + R Sbjct: 357 LPPQACQIVLAALQEAKEKECSIGKQIKVPLDNGMHWFEMSVTRKSALPGEEPLFLVLCR 416 Query: 311 IYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGKSFCCLRIDNLEF 362 S+ R+ L A D LT LPN L + L +D+ + Sbjct: 417 DITESKQAERKIQLLAHFDSLTGLPNRVLLTDRCNLALSAAQRNGTPLALLLLDLDHFKN 476 Query: 363 MSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN 422 ++ G + + ++ L ++E + + +L G E +LVL G H+ +L Sbjct: 477 VNDSLGHRVGDEVLIALAGRLKGAVREQDTVCRLGGDEFILVLPETNAAGAA-HIAEMLL 535 Query: 423 S---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREE 479 L + F G+ L ++ Sbjct: 536 QSALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRN-NYRFFTA 594 Query: 480 MVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPD 536 + ++ + + L N +R AL++ L L+ QP + G + +L + G + P Sbjct: 595 EMQARSERTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHPELGAVPPA 654 Query: 537 KFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIR 595 +F+P+ L VL + ++ L SVNL + ++ + Sbjct: 655 EFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHADLPELVTS 714 Query: 596 LFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRL 655 + + + LE+TE A ++ ++ + LH+ G R++IDDFGTGY++ LK+ Sbjct: 715 ILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKF 774 Query: 656 QADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQY 715 + IKID FV+DI ++ D IV +I +A + + +AE VET+ Q L G Sbjct: 775 RVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTE 834 Query: 716 LQGYLIGRPQPLA 728 +QGY RP P+ Sbjct: 835 VQGYYFSRPLPVE 847 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 99/473 (20%), Positives = 189/473 (39%), Gaps = 30/473 (6%) Query: 272 LCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPL 331 L+ E S+ F ++ IS ++ + + QA D L Sbjct: 406 FIELHNCTREYHWSLQEESILFAMSASISAAL----------QRQDKEEIIRHQAFHDAL 455 Query: 332 TLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTL 383 T LPN + + +D + ++ G + ++ + L Sbjct: 456 TDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLINDTLGHSIGDELLKEVALRL 515 Query: 384 LPLMQENEKLYQLPGSELLLVLSGPETEGRLQ----HMVNILNSRQIHWNNTGLDMGYGA 439 +++ + + + G E ++L E+ +++ L + L + Sbjct: 516 QDCLRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDALKAA-FVIRRHELFVTTSI 574 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 + + + + LL +S ++ +Q +L N++R AL Sbjct: 575 GIAIYPEDGQEAEILLQNADVALYRSKEQGRGTC-QLYNPTMN--AKEQFILENSLRHAL 631 Query: 500 DQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVL 556 D+ + +L+ QP N E G + ++ + G+++P F+P+ + L VL Sbjct: 632 DRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIPIAEETGLIVELGEWVL 691 Query: 557 ESLLKWLATHPC-DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + + ++NL Q N+ + ++ + ++PQ + LEITE Sbjct: 692 RTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIESTGLNPQQLELEITETI 751 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 A N E + + L G IA+DDFGTGY++ LK+L + +KID F++D+ + Sbjct: 752 AVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFNTLKIDQSFIQDLKPASK 811 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 D I+ ++ L K L VVAE V+ ++Q LL L + +QGYL RP + Sbjct: 812 DVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQGYLFSRPLSVD 864 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 91/456 (19%), Positives = 176/456 (38%), Gaps = 15/456 (3%) Query: 288 EYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF--------RA 339 E + + + + + QA D LT LPN +A Sbjct: 867 EAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFLAIDRLKQA 926 Query: 340 LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGS 399 + QA Q+ + + +D+ + ++ G ++ + + L +++++ + +L G Sbjct: 927 ILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGD 986 Query: 400 ELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLG 456 E L++L + + + + S + + + + + + L+ Sbjct: 987 EFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLMR 1046 Query: 457 QLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE- 515 ++ + ++ + +R AL + + L QPI + Sbjct: 1047 NADAAMYLGKRGGRND-FKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRF 1105 Query: 516 --GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP 573 G + +L + G ++PD+F+ + + L + V+ + + Sbjct: 1106 QTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGSPI 1165 Query: 574 RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKF 633 +VNL P + + I I+ + LEITE+ + S IEQLH+ Sbjct: 1166 WVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHEM 1225 Query: 634 GFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLS 693 FR++IDDFGTGY+ L + + +KID F+ DI N +V++I + L Sbjct: 1226 DFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLKLQ 1285 Query: 694 VVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 V+AE VET +Q +L G Y QGY RP + Sbjct: 1286 VIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEE 1321 >UniRef50_Q1GYF3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYF3_METFK Length = 747 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 128/728 (17%), Positives = 255/728 (35%), Gaps = 35/728 (4%) Query: 34 LAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTN----LWNFHLSFLQTAVM 89 A+++ + ++ A + + +F W + + + + A Sbjct: 11 SAVVNVAILYQAQLVTLQHVLPALLFAWLVNALGVLLLLPLLLNITWAEIRSFWQRRARF 70 Query: 90 LGSQTFVVLCACAILR----WQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGS 145 V AI + + W L V +G+ + ++ +V Sbjct: 71 SLLALLAVTVEWAIFQLVPDYADQYMWFAFLVLPLVVLISMRMGITGVSMVVLALSIVAL 130 Query: 146 FFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSP--HFAQILWRRD 203 + + +L +++ + +R + ++ +R Sbjct: 131 MSAQVDYQAGLDHAGYQPVWALWVLMATLSIVGMLIAALQSSREVTERALRHSETKFRAV 190 Query: 204 IAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFL 263 I + L + ++ D + LV + + + + Sbjct: 191 IENAQDGIVSIDEDGRLVEFNHAAEVMFGYRREDVLGKMLVDILIPLSLRDAHRRGHE-R 249 Query: 264 NLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLL-YMVRIYHRSEWLNRRW 322 L VS + + L+ TE+ + + L + LL R + Sbjct: 250 YLASGVSKMLDRRLELSALRADGTEFPVEVTITSLKEQGLPLLTGFFRDLTERRKVESEI 309 Query: 323 HLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVH 374 A D LT LPN R L + + +DN + ++ G + Sbjct: 310 RNLAFYDALTTLPNRRLLLDRLQQAIAASVRHGRHGAVLFIDLDNFKALNDSRGHDIGDL 369 Query: 375 CIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP---------ETEGRLQHMVNILNSRQ 425 + + R L ++ + + +L G E ++VL +T Q ++ I+N Sbjct: 370 LLVEVARRLRQCVRNEDTVARLGGDEFVIVLEDLSLNLEQAIAQTRQVAQKVLEIIN-HP 428 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 F+GN +++ LL + ++ A L + + Sbjct: 429 YQLGEIEHHNSSSIGIVLFNGNFVSMEELLKRSDTAMYEAKAAGRN-TLRFFDPAMQAAL 487 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIA 543 ++V + +R A+ Q L L+ Q + E G + +L D G++ P +F+ + Sbjct: 488 ERRVDMELQLRLAIVQKQLRLFCQVQVDAERKVFGAEILLRWQHPDHGLLAPKEFVGIAE 547 Query: 544 QFNLSARFDLQVLESLLKWLATHPC--DKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L VL + L + +VN+ + + ++ + Sbjct: 548 DSGLIVSIGHWVLYNACLQLKDWEARPGFDSLQLAVNVSARQFRHADFVDEVRKILQSTG 607 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 P + LE+TE N ++ + L + G R ++DDFGTGY++ LKRL +K Sbjct: 608 ADPSLLKLELTESVVLDNIADAVAKMNALRELGVRFSMDDFGTGYSSLAYLKRLPLSQVK 667 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV++I + DA +V++I ++ L V+AE VET+ Q LL G ++ QGYL Sbjct: 668 IDRSFVREIAEDASDAAMVQAILAMSNTLGLKVIAEGVETEVQFELLQSYGCRFFQGYLF 727 Query: 722 GRPQPLAD 729 +P + D Sbjct: 728 AKPMLIQD 735 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 109/473 (23%), Positives = 193/473 (40%), Gaps = 24/473 (5%) Query: 278 NQNFLQGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL 334 L Y I+ + + + RR A D LT L Sbjct: 339 ETQRLHADGYPYPQWEIVTPVQDDRGEISHFVICFEDISERKEAERRIQDLAYYDELTGL 398 Query: 335 PNFRALEQAPEQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPL 386 PN R L + G + + +D+ + ++ G ++ + L L Sbjct: 399 PNRRQLHETLAHAFGEASRDYLIGALLFIDLDHFKTINDSLGHATGDWLLKEVASRLKRL 458 Query: 387 MQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYG 438 +++ + L +L G E +L+L + E + + L S + L +G Sbjct: 459 VRQGDCLARLGGDEFVLLLPSLSASPPQAEMQADLIAERLISEIAAPYNHAGQVLHIGAS 518 Query: 439 AAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTA 498 F G ++ + LL Q Q+ + + + Q +++L+ N +R+A Sbjct: 519 VGITLFPGREQGVDDLLKQADTAMYQAKSAGRK-TRRFFDASMQLQADRRLLIHNELRSA 577 Query: 499 LDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQV 555 L+Q +L LY QP + G + ++ +++P +F+P+ + +L V Sbjct: 578 LNQQELTLYYQPQHMVEGGDIIGVEALIRWQPPGRALVSPAEFIPIAEETDLIVDIGNWV 637 Query: 556 LESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEE 614 L + P+ SVN+ + RI + + P ++ LEITE Sbjct: 638 LYEACAQYVRWEENGIHIPQLSVNVSAKQFHATDFVDRIHDVLASTGMDPASLNLEITES 697 Query: 615 QAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNT 674 +AE ++ + +L G AIDDFG GY++ LKRL AD +KID F++DI + Sbjct: 698 VVLGHAEDTISKMSELKALGISFAIDDFGAGYSSLSYLKRLPADELKIDRSFIQDIPRDG 757 Query: 675 LDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPL 727 + IV ++ +A+ +V AE VE++QQ L G + QGYL +P P+ Sbjct: 758 DNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFLQAQGCHFYQGYLASKPLPV 810 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 101/566 (17%), Positives = 211/566 (37%), Gaps = 27/566 (4%) Query: 190 IVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFI 249 + + I + E R L ++L+ + A ++ Sbjct: 131 LAARVHTHIALKVAYRHLKDSELRYRKLVETTPDAILVEGEEGIVFLNSAAVKMLKADNP 190 Query: 250 IFTLGVGKLRYPFLNLTWAVSTLCLLNYNQN----------FLQGVETEYSLAFILAVLI 299 LG L + + + + + Q + + Sbjct: 191 DKLLGGALLDFVLDDQKEYAAMQLKQACSVDRSAGPPEVMLLQQLTGGRVEVEVNCIPIS 250 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQA--------PEQEAGK 350 S C ++++R QA D LT LPN E+ Sbjct: 251 YHRSPCHMFVLRDITERRRQEAAIEFQATHDALTGLPNRSLFLDRVTQSINHARRNESRL 310 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G +R + + L + + L + G E +L++ E+ Sbjct: 311 ALIFIDLDKFKLINDTLGHNAGDDLLRIMSKRLQECTRNCDTLARFGGDEFVLLVDNLES 370 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E L H+ L S + + F + + ++ L+ ++ Sbjct: 371 EADLTHLAARLISSVSAPVLLLGQSHSITCSLGISSFPEDGDNVEVLMRHADIAMYRAKE 430 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 + + + +++ L ++++ AL+ + +L+ QP + + G + ++ Sbjct: 431 SGRN-SYQFFTHQMQDRLNERLKLESSLKQALENDEFVLHYQPQVDLSTGKIIGLEALIR 489 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGP-RFSVNLMPLT 583 G++ P F+P + L + V+ ++ K L + ++N+ L Sbjct: 490 WQSPTLGLVPPGDFIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVPVAINISALQ 549 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 +++ + + Y + P+ + LE+TE + + +S+ +++L G ++IDDFG Sbjct: 550 FMEQKTEELVKQALNEYMVEPKYLELELTESLSMLDPVTSISLMQRLKDIGVSLSIDDFG 609 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY+N LKR + +KID FV + N D IV++I ++++ L +AE ET Sbjct: 610 TGYSNLSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAG 669 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q ALL +QG+ RP P A+ Sbjct: 670 QIALLAAENCDAIQGFYFSRPLPEAE 695 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 104/448 (23%), Positives = 181/448 (40%), Gaps = 15/448 (3%) Query: 296 AVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------E 347 A + + R + H QA D LT LPN L+ Q Sbjct: 260 APHPGQFLGTYGIARDVTDRKHAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGN 319 Query: 348 AGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSG 407 + L +D + ++ G + ++ + + L ++E + L +L G E L+L Sbjct: 320 EEVAVLFLDLDRFKVVNDSLGHSVGDQLLQQVAQRLRACLREGDTLARLGGDEFTLLLPA 379 Query: 408 PETEGRLQHMVNI---LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 ++ + + +N L +G F + ETL+ L+ Sbjct: 380 IPDRPAVERVAQKCIDALEQPFMVHNHRLFLGVSIGIALFPEHGETLETLIKHADVAMYH 439 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDE 521 H ++ + + + + +R AL+Q + + QP + G + Sbjct: 440 VKEHGKGH-YTFFDQAMGSRIDHHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTGMEA 498 Query: 522 ILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMP 581 ++ + G ++P +F+P+ Q L +L S + L P +G R +VNL P Sbjct: 499 LIRWQHPETGEVSPREFIPVAEQTGLILPIGEWLLRSACEELLRWPDGNEGLRLAVNLSP 558 Query: 582 LTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDD 641 L + Q++ R+ + + + LEITE + ES + + L + G I IDD Sbjct: 559 LQVHQRDFVDRVRAICDETGFPLRRLDLEITENLLMRDVESVVEKLRTLSRLGVTITIDD 618 Query: 642 FGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVET 701 FGTGY++ L+RL +KID FV I N +V +I +A L+VVAE VET Sbjct: 619 FGTGYSSLGYLQRLPIHALKIDQSFVHAIRENEEKGTLVETIIAMAHGLGLNVVAEGVET 678 Query: 702 QQQQALLHKLGVQYLQGYLIGRPQPLAD 729 ++Q L +L +QG+ P + Sbjct: 679 KRQLDYLRRLQCGRMQGFYFSYPLSGHE 706 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 98/470 (20%), Positives = 179/470 (38%), Gaps = 25/470 (5%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + ++ + + + + + A D LT LPN R Sbjct: 575 RKNGEVFPEWLTISAVKDPAGQATHYVATFTDLSTRKSAEDQIKSLAFYDTLTGLPNRRL 634 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L + + +D+ + ++ YG + ++ + + L ++ + Sbjct: 635 LLDRLKQALASGARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRLSHYLRAGD 694 Query: 392 KLYQLPGSELLLVLSGP--ETEGRLQHM------VNILNSRQIHWNNTGLDMGYGAAWGR 443 + + G +++L + + + S+ + Sbjct: 695 TVARPGGDSFVVLLEALSTNSVEAATEAENTGEKIRLALSQPYQIADHAHRSTASIGVTL 754 Query: 444 FDG-NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQG 502 FD QE + L + Q+ L + + L +R A+ Sbjct: 755 FDDRQQEGIDEPLKRAELAMYQAKTAGRN-TLRFFDPQMQTAVMAMAALEADLREAVRSN 813 Query: 503 DLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LLY Q + + G + ++ G++ P +F+PL Q L VLE+ Sbjct: 814 QFLLYYQAQVSGERQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLGQWVLETAC 873 Query: 561 KWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFS 618 LA + +VN+ L Q + +++ KR +PQ + LE+TE Sbjct: 874 AQLAAWASQPERAHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKLELTESLLVH 933 Query: 619 NAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAM 678 +AE + + L + G ++DDFGTGY++ LKRL + +KID FV+DI+ + DA Sbjct: 934 DAEDVIAKMITLKEQGVGFSLDDFGTGYSSLSYLKRLPLNQLKIDQGFVRDILHDANDAA 993 Query: 679 IVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 I + + LA LSV+AE VET+ Q+ L G QG+L R P+ Sbjct: 994 IAKMVVALADTLGLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPID 1043 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 99/518 (19%), Positives = 202/518 (38%), Gaps = 25/518 (4%) Query: 236 NDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAV-----STLCLLNYNQNFLQGVETEYS 290 ++ I L+ + I LG R + + + + L + Sbjct: 380 SNLILMLLIAIMIIAAFLGFIYCRRSLIMPIYQMVNQLQRPVTEGGQVYPELLDDRRQDE 439 Query: 291 LAFILAVLISFSVCLLYMVRI----YHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP-- 344 + + L R + + + AL DPLT LPN + Sbjct: 440 FGLLAYHFNQSKMALDSNNRDLKLQINERKQAEYQLKHLALHDPLTGLPNRLLFQDRLEQ 499 Query: 345 ------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPG 398 + + + +DN + ++ G ++ + L ++ + + +L G Sbjct: 500 AIALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSCTGRKTDTVARLGG 559 Query: 399 SELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 E +++ T LNS I N ++MG + + + LL Sbjct: 560 DEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMGSSIGITIYPDDAANSEELL 619 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI--RN 513 Q+ + ++ + + +L + +L + LY QP+ + Sbjct: 620 RNADIAMYQAKDDGRN-TVRFFTSEMNARLQRNKEVLTDLAESLTKEHFELYYQPLFTID 678 Query: 514 KEG-EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKG 572 + G + ++ + G++ PD+F+ + + L VL + + Sbjct: 679 QNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDWVLAQACREIKNFLNAGIT 738 Query: 573 P-RFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLH 631 + ++N+ P+ +K++ ++ + ++ +S + + LEITE N + ++ ++ LH Sbjct: 739 VFKVAINISPVQFRRKDLLQHMLMILAQHDVSAELIELEITEGAVMDNVDQAIETMQALH 798 Query: 632 KFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKS 691 GF++A+DDFGTGY++ LKR +KID F+ D+ + I +I ++ + Sbjct: 799 DAGFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDLENDDDSKSITTAIIQMSHSLG 858 Query: 692 LSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 L V+AE VET++Q L Y+QGY GRP P ++ Sbjct: 859 LHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASE 896 >UniRef50_UPI00016AFAA6 predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA6 Length = 709 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 117/616 (18%), Positives = 231/616 (37%), Gaps = 36/616 (5%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTA-VLIYNMLFYYLTRMIV---------SPHFAQI 198 T + + D+ +++ + AQ Sbjct: 78 LKAIDHTRDAPVIFMTALSDVQDKVAGFAAGGIDYLTKPFQIVELAARVKTHLALRAAQR 137 Query: 199 LWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKL 258 A E R L A+ ++L+ + D A + + F + Sbjct: 138 QLVLANARLASSEARYRRLFETASDGIILVDMAGSRITDVNASLVEMLGFERDHFVGRPI 197 Query: 259 R--YPFLNLTWAVSTLCLLNYN-------QNFLQGVETEYSLAFILAVLISFSVCLL-YM 308 PF + S L + + T + F+ ++ ++ Sbjct: 198 GSVPPFEAVPECASLCATLAASGEIRCEHTSLATATGTLLDVEFLASLYTVGGARIVQCN 257 Query: 309 VRIYHRSEWLNRRWHLQALTDPLTLLPNFRALE--------QAPEQEAGKSFCCLRIDNL 360 VR + R AL D LT LPN L+ +A + + L +D Sbjct: 258 VRDITERKQAEARVRYMALHDALTGLPNRALLQEHLAQAIARARREGGCVAALMLDLDRF 317 Query: 361 EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI 420 + ++ G + + + L ++E + + +L G E ++ L+ + + + Sbjct: 318 KHVNDSLGHHIGDRLLEAASMRLRGCLREGDTVARLGGDEFVIGLADVDGDQGAGEVATR 377 Query: 421 LN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSR 477 + SR N L +G R+ + E +Q LL + A+ Sbjct: 378 VLTTLSRPFFVENHELHVGCSIGISRYPADGEDVQTLLRAADTAMYDAKANGRG-IYRFF 436 Query: 478 EEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMT 534 ++ +++ L IR A D+G+ +L+ QP + G + +L + G+++ Sbjct: 437 TPELNAAAQQRLALARDIRYAFDRGEFVLHYQPQVCTHSGAITGVEALLRWRHPEHGLIS 496 Query: 535 PDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRI 593 P +F+P++ + L VL + + R +VNL L + +I + Sbjct: 497 PLQFVPMLEELGLIVAVGQWVLRTACQQSVQWQSAGLPPVRMAVNLSAYQLQRGDIVRTV 556 Query: 594 IRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLK 653 + ++ + + LE+TE A NA+ ++ + + + G +++DDFGTG+++ L+ Sbjct: 557 DEALRETGLAAEWLELELTETMALYNAQEAIRIMREFKQLGVSLSLDDFGTGWSSLSYLR 616 Query: 654 RLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGV 713 + D IKID F++D+VT+ + +V+ I LA L +AE VET QQ L + Sbjct: 617 QFPIDRIKIDRSFIRDVVTHPGASAVVQGIMTLANHLGLQCIAEGVETVQQFGFLQERAC 676 Query: 714 QYLQGYLIGRPQPLAD 729 +QG+L+ P + Sbjct: 677 GEIQGFLVSPALPAHE 692 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 90/465 (19%), Positives = 189/465 (40%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVL---ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y +A + +V + + + QA D LT LPN Sbjct: 489 RKSGETYPEWLSIATVTNDKGETVQYVAAFSDITKRKQAEETILHQANYDFLTDLPNRNL 548 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + +D +F++ G + +R + L ++E++ Sbjct: 549 FHDRLQTELKRSQRSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESD 608 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L + + + + + L + + + Sbjct: 609 TIARLGGDEFTVILPELHGPEGVARLAQGMIDKLEERYCIQDHELFISASIGITIYPEDA 668 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + + L+ ++ + + ++ + + +R AL++G ++ Sbjct: 669 DNMMDLVKNADVAMYRAKENGRG-SFCFYTAEMNADARQLHKIEQALRVALEEGQFWIHY 727 Query: 509 QP---IRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ G I+ PD+F+P+ + L L VL S++ +A Sbjct: 728 QPYVQQSSGLITGVEALIRWRNSAGEIVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQ 787 Query: 566 HPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + FSVN+ + ++ G+I + I+PQ+++LEITE + E ++ Sbjct: 788 WQREGHPDITFSVNVSARQFQEGHLVGQIKAALQENQINPQSLMLEITESLMIRDPEHTL 847 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 ++++ G R+A+DDFGTGY++ LK+ D++KID F+ I + D +V +I Sbjct: 848 NMLKEIKALGVRVALDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIV 907 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + + V+ E +E QQ ++ Y+QG+ RP P + Sbjct: 908 SMAHSLGVGVIGEGIENDQQLQRVNLHACDYVQGFFYSRPMPYDE 952 >UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V069_9PROT Length = 734 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 96/493 (19%), Positives = 184/493 (37%), Gaps = 25/493 (5%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI----SFSVCLLYMVRIYHRSE 316 P LNL + + E L + + LL +V + + Sbjct: 233 PLLNLHQQAQVVLTSGIALRGIDAALGEKWLRLTITGIRLAEEEEEEDLLVIVEDITKLK 292 Query: 317 WLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYG 368 A D LT LPN L + + + +DN + ++ G Sbjct: 293 AQAVHIEQLAFYDSLTGLPNRSLLRDRVQRVLAHSARHKNHGAILFIDLDNFKALNDTKG 352 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETEGRLQHMVNILNS 423 + + + + L ++ ++ + ++ G E ++VL + + Q + + + Sbjct: 353 HNIGDLLLIEVAKRLQDCVRNSDTVARMGGDEFVVVLEELNEDTQQAVAQAQDIGETVLA 412 Query: 424 ---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM 480 R + F N+ + + Q+ L + Sbjct: 413 SLNRPFNLQGFEHYSSASIGISLFRDNEIGMDDVFKHADTAMYQAKTSGRN-TLRFFDPD 471 Query: 481 VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNK--EGEGYDEILARLKYDGGIMTPDKF 538 + + +L +R AL L+ Q N + G + +L L G+++P F Sbjct: 472 MQASLEARAVLEIDLRHALSLQQFKLFFQIQMNAANQPIGAEALLRWLHPKRGLVSPLDF 531 Query: 539 LPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQKNIAGRIIRL 596 + L L VLE+ + + + +VN+ Q + ++ Sbjct: 532 ISLAEDTGLILPIGQWVLETACTQIKAWEANPLACELQLAVNVSARQFHQPDFVEQVRAA 591 Query: 597 FKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQ 656 ++ P + LE+TE +N ++ + L + G R ++DDFGTGY++ L +L Sbjct: 592 LEKTGADPARLKLELTESVVLNNINDAVIKMSDLKEVGVRFSMDDFGTGYSSLSYLTQLP 651 Query: 657 ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYL 716 D +KID FV +I DA+IV++I + + + V+AE VET+ Q+ L + G Sbjct: 652 LDQLKIDLSFVYNIGIKPTDAVIVQTIISMGNSLGMEVIAEGVETEAQRDFLERNGCHAY 711 Query: 717 QGYLIGRPQPLAD 729 QGYL +P + + Sbjct: 712 QGYLFSKPVSIGE 724 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 115/456 (25%), Positives = 191/456 (41%), Gaps = 21/456 (4%) Query: 292 AFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 A L+ +I ++ MV + + A DPLT LPN R L Sbjct: 582 AVELSGMILGDSHIVTMV-DQSQRKAAEEEVRYLAYNDPLTGLPNRRLLLDRLEQALAMS 640 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + L +DN + ++ G M +R + R L + E+E L + G E ++ Sbjct: 641 ARHQLCGAVMMLDLDNFKTINETQGPDMGDRLLREVARRLRDCVPEDETLARHGGDEFVV 700 Query: 404 VLSGP-----ETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLL 455 VL E R + M + + + F G +E+ LL Sbjct: 701 VLKDLGADPQEAANRAEEMGQTILAAIRAPFDIDGQQHHTALSVGIAIFRGVRESADELL 760 Query: 456 GQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN-K 514 + ++ A L + + +++ L +R LD G L L+ QP + Sbjct: 761 KRSDLAMYEAKAAGRD-TLRFFDPQMQAAVSERAALEADLRAGLDAGQLELFYQPKVDQG 819 Query: 515 EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKG 572 G + ++ D G ++P +F+PL + L R V+ S LA Sbjct: 820 RITGAEALVRWRHPDRGFISPAEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGE 879 Query: 573 PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHK 632 +VN+ P + + +++ + + LE+TE + E ++ + QL Sbjct: 880 LTVAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRG 939 Query: 633 FGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSL 692 +G ++DDFGTGY++ LKRL +KID FV+D++T+ DA+I R+I L + L Sbjct: 940 YGVGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGL 999 Query: 693 SVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 VVAE VET+ Q+A L + G QGYL+ P A Sbjct: 1000 RVVAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAA 1035 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 96/465 (20%), Positives = 191/465 (41%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLISFSV---CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + + ++ + + + + R + ++ DPLT LPN Sbjct: 463 RRNGEIFPKWLAISAIRNRQGVISHFVGVFNDISRQKSTEQQLERLVFYDPLTQLPNRVL 522 Query: 340 LEQAPEQEAGKS--------FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 E G + + +D + ++ G + + + + L+ +++++ Sbjct: 523 FRDRLIHEVGVAERSNKLMSLLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSD 582 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L G E H+ + L +G + Sbjct: 583 TVARLGGDEFAIILPGMERAEDAAHVAETIINQLQVPFSIEENELFVGASIGIAVHGQDG 642 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L ++ ++ Q K++++ +R A+D +L+L+ Sbjct: 643 DDYDSLTMNADAAMFKAKESGKG-TYKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLHY 701 Query: 509 QPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + + G + ++ + G++ P +F+PL + L VL + Sbjct: 702 QPKVDAESRQIVGMEALVRWVHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQ 761 Query: 566 HPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 + +VNL P + N+ ++ + ++ + LEITE A + ++++ Sbjct: 762 WWDMGLPQVQVAVNLSPRQFQEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTI 821 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 +++L G RI+IDDFGTGY++ LK+ +KID FV+D+ + A I+ SI Sbjct: 822 ETVKKLKDLGVRISIDDFGTGYSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSII 881 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +AKA +L VVAE VET QQ L Q +QG+ + +P P +D Sbjct: 882 SMAKAMALGVVAEGVETAQQMEFLRGQECQQVQGFFLSKPLPPSD 926 >UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Chroococcales RepID=B7KBH1_CYAP7 Length = 712 Score = 645 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 105/488 (21%), Positives = 185/488 (37%), Gaps = 19/488 (3%) Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSE 316 +L +P L S N +Q E+ Y + L + + Y+ + Sbjct: 209 QLDHPILMGLLDQSKNTQGNLLLREVQVEESIY--EQYVHYLPNHQLIRSYLF-DITERK 265 Query: 317 WLNRRWHLQALTDPLTLLPNF--------RALEQAPEQEAGKSFCCLRIDNLEFMSRHYG 368 ++ QA D LT LPN AL A QE + L +D + ++ G Sbjct: 266 RTEQKLKYQAFHDVLTGLPNRIWFNQQLIAALNNAKRQETPLAILFLDLDGFKNINDTLG 325 Query: 369 LMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---Q 425 ++ + LL ++ + + + G E +++L + + Sbjct: 326 HTFGDQVLQKFGKRLLGSVRAGDTVCRWGGDEFVVLLPYISHTEDSIKLAQRILDVLKHP 385 Query: 426 IHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQT 485 + + + E + LL ++ ++ + Sbjct: 386 FEIQKQQFYIKTSMGISIYPQDGEDGETLLKNADAALYRAKERGRNH-FQFYSTTMTTKA 444 Query: 486 TKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFLPLI 542 + + L N + AL+ +L LY QP E G + +L + G ++P K +PL Sbjct: 445 SLVLRLENLLHRALENQELSLYYQPQVKIKTGEITGIEALLRWTHPELGQVSPHKLIPLA 504 Query: 543 AQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 Q +L L++ + K +VN Q N+ I ++ + Sbjct: 505 EQTDLIIPIGQWALKTACQQSLDWQKLGIKPLPIAVNFSARQFQQPNLVTLINQVLEETG 564 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 ++P + LEITE N + + +E+L + G I++DDFGTGY++ L++ +K Sbjct: 565 LAPNLLELEITETTIMQNEDFARQALEELRQMGVHISLDDFGTGYSSLSYLQKFPLTTLK 624 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID F + N D I+ +I L L V+AE VET QQ +L +L Q QG+ Sbjct: 625 IDQCFTHSLKDNPQDLAIISAIITLGNHLQLRVIAEGVETLQQLEILQRLHCQEAQGFWF 684 Query: 722 GRPQPLAD 729 RP D Sbjct: 685 SRPLNSED 692 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 94/464 (20%), Positives = 194/464 (41%), Gaps = 18/464 (3%) Query: 283 QGVETEYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++V+ + M + + AL D LT +PN Sbjct: 95 RKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVEQLTRLALYDTLTNVPNRYL 154 Query: 340 LEQAPE--------QEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 LE+ E + L +D + ++ G + ++ + L ++++ + Sbjct: 155 LEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVGDMLLKETAQRLKRMLRKQD 214 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDGNQ 448 + + G E +++L + +M + R +N+ + + + + Sbjct: 215 TIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKRPFCFNHQEIYISTSIGISVYPYDG 274 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ Q+ + + G + L +R AL++G+ LY Sbjct: 275 TDKETLIRMADRAMYQAKKNGRNQ-YALYHAGMHGNGKQLFQLETALRKALERGEFELYY 333 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + K+ + ++ + G ++P F+PL + L ++ + L Sbjct: 334 QPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGLITPISDWIMMQACEHLKQ 393 Query: 566 HPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMY 625 + S+N+ P+ Q + ++ + + +++P+ + LE+TE +AE S+ Sbjct: 394 LQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVNPRLIELELTESAVMPHAEQSVE 453 Query: 626 NIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITD 685 + +L G IAIDDFGTG+++ L R DI+KID F K + D+ IV++I Sbjct: 454 RLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKIDRSFTKQLSRYQQDSAIVKAIIM 513 Query: 686 LAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A + + VVAE VET++Q +L K ++QGY + +P +++ Sbjct: 514 MAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSKPLSISE 557 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 108/550 (19%), Positives = 210/550 (38%), Gaps = 28/550 (5%) Query: 206 PSLGKEKRAFTLSWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF---IIFTLGVGK 257 + + + ++ + ++ +L + G+ + L Sbjct: 494 QLEQRLELWAKVFETSSEGIFIVDAQQRILTANWALTRSTGHDLIELMGGDPAELLAGAD 553 Query: 258 LRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCL---LYMVRIYHR 314 R + +L V T + +Y + + + + + Sbjct: 554 ARQTWQSLVERVQTRGSWQGEVRICRRAGGDYPAWLLANAVRDRAGHVSHWVCTSIDITD 613 Query: 315 SEWLNRRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRH 366 + RR A D LT LPN L+QA + + +D + ++ Sbjct: 614 RKESERRIRFLAEHDVLTELPNRALCIERLRLALQQARRTGQKVAVLFIDLDRFKNINDS 673 Query: 367 YGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-ETEGRLQHMVNILN--- 422 G + +RS+ + L+ ++ + + +L G E ++VL+G + E + L Sbjct: 674 LGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVVVLNGLADIEEVAHVVEQRLIPRV 733 Query: 423 SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVS 482 + + + F + + + L+ Q Q+ A A ++ Sbjct: 734 RQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGA-QFFTAEMN 792 Query: 483 GQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYDGGIMTPDKFL 539 + ++++ N +R+A+ QG L L+ QP + G + +L + G + PD+F+ Sbjct: 793 QRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWHSPELGHVPPDRFI 852 Query: 540 PLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFK 598 P+ + L V+E+ + S+NL L L + + + Sbjct: 853 PVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLSALQLRDPGLLDVLRASLE 912 Query: 599 RYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQAD 658 R+ + P + LE+TE ++ + + L + G R++IDDFGTGY++ L R D Sbjct: 913 RHAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLTRFPID 972 Query: 659 IIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQG 718 +KID FV+D++ + D I+++I L L VVAE VE + + L G LQG Sbjct: 973 QLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGCDELQG 1032 Query: 719 YLIGRPQPLA 728 Y RP Sbjct: 1033 YHFARPMAAD 1042 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 123/562 (21%), Positives = 209/562 (37%), Gaps = 36/562 (6%) Query: 200 WRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 + R E R +LS L++ V + LG + Sbjct: 261 YLRVENQLRDSEARFRSLSDLSSD-WYWEHDAQGRFTQLAGDLSVNGMPLSAVLGRTRWE 319 Query: 260 YPFLNLT---WAVSTLCLL------NYNQNFLQGVETEYSLAFILAVLISFSV---CLLY 307 LN+T WA L + + + + ++ + Sbjct: 320 IGALNMTEADWAAHRAVLAAQQPFRDLELQRRRADGSMHWISVSGVPVQGADGTPRGYRG 379 Query: 308 MVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDN 359 + R + + A D LT LPN R L + + + +DN Sbjct: 380 VGRDITGRKQAEGQIERLAFYDALTGLPNRRLLLDRLQHATVAVTRSNTQGALLFIDLDN 439 Query: 360 LEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ---- 415 + ++ G H ++ + L ++E + + + G E +++L+G Sbjct: 440 FKSLNDTLGHDAGDHLLQQAAQRLKACVREVDTVARFGGDEFVVLLAGLSAAAAQASAEA 499 Query: 416 -----HMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHH 470 H+ L + F + LL Q Q+ A Sbjct: 500 AQVAKHIAASL-GQPYALGGAVHHSTPSIGIALFGPQACRVDELLKQADLAMYQAKAAGR 558 Query: 471 VLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGE--GYDEILARLKY 528 + + + + L +R L Q +L+L+ QP+ + +G G + ++ Sbjct: 559 NTQ-RFFDPEMQAAASHRSALEADLRRGLQQRELVLHYQPMVDGQGRLQGAEALVRWNHP 617 Query: 529 DGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD--KKGPRFSVNLMPLTLLQ 586 G+M P +F PL Q L VLE+ L + SVN+ Q Sbjct: 618 QRGLMPPAEFTPLAEQTGLILPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQFRQ 677 Query: 587 KNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGY 646 + +++ + +P+ + +E+TE ++ + + ++QL G A+DDFGTGY Sbjct: 678 ADFVQQLLATLEASGANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGY 737 Query: 647 ANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQA 706 ++ +LKRL D IKID FV+D+ + D IVRSI LA++ L+VVAE VET+ Q Sbjct: 738 SSLSQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLE 797 Query: 707 LLHKLGVQYLQGYLIGRPQPLA 728 L G Q QGY GRP P Sbjct: 798 FLQHHGCQTFQGYHFGRPMPPE 819 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 84/447 (18%), Positives = 187/447 (41%), Gaps = 19/447 (4%) Query: 299 ISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL---------EQAPEQEAG 349 + + + + + + + DPLT LPN R L + + Sbjct: 493 AGMARNYIASITDLTERKQVEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQQ 552 Query: 350 KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPE 409 + + +D+ + ++ G ++ + + + L++E + + +L G E ++++ Sbjct: 553 FALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITELVREGDTVSRLGGDEFMILMPELH 612 Query: 410 TEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSC 466 + ++ + ++ + ++ L + + + ++ LL + Sbjct: 613 KLEQAANLAERILHNIAQPLENDSH-LMITPSVGIAVYPNDGDSFDKLLRNADAAVHFAK 671 Query: 467 AHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEIL 523 ++ + ++++ + ++R A++ + L+ QP R+ G + ++ Sbjct: 672 RQGRN-NYQFYTAEMNQRASERLQVEISLRKAVENQEFELFYQPQLNLRDGSLAGVEALI 730 Query: 524 ARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPC-DKKGPRFSVNLMPL 582 + G++ P++F+PL + L + VL + A + SVN+ Sbjct: 731 RWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAAKSTEPFTMSVNVSVR 790 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 + + +SP+++++EITE + E ++ + +L + G ++++DDF Sbjct: 791 QFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLLHELKELGVQLSLDDF 849 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LKR D +KID F+ D+ N DA I +I D+A L VAE +E Sbjct: 850 GTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVASHFGLVTVAEGIEKP 909 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLAD 729 +Q L +G QGY +P P D Sbjct: 910 EQAEFLASVGCIEGQGYYYEKPIPAND 936 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 117/605 (19%), Positives = 207/605 (34%), Gaps = 42/605 (6%) Query: 161 DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRA------ 214 + + + ++ VL ML L + Q L A R Sbjct: 482 EQLRSWAAWGTIAVGVLTSAMLGALLLITTGNRRRIQALVEHRTAELQAASVRLHENRAA 541 Query: 215 --------FTLSWL-------AALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLR 259 SW S L LL D L + I L Sbjct: 542 LIDAQRIARLGSWETLCARDGLHASDELHLLLDSTAGDLN--SLADLIDAIAPASRAALT 599 Query: 260 YPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLN 319 + L + ++ + + + + Sbjct: 600 DALERAATEPGRIMLDCNTDSLPMRT-LQFRIE--GEHVGGRLRRIRGTAQDVTALREAE 656 Query: 320 RRWHLQALTDPLTLLPNFRA--------LEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMM 371 R A DPLT L N A L A + + L +D+ + ++ G Sbjct: 657 ARIRYLARFDPLTGLLNRSAWQDHAQDVLRHAARHDDRCAVLFLDLDDFKTVNDSLGHAA 716 Query: 372 RVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILN---SRQIHW 428 + + L ++ + + ++ G E +++LS + + +R + Sbjct: 717 GDRLLAQVACRLGGCVRAEDLVARIGGDEFVILLSRLAHAEEPARVAERVLDALARPLQI 776 Query: 429 NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQ 488 ++ L +G + + + LL ++ A ++ + T++ Sbjct: 777 DSQPLRVGASIGIALYPADGGEIDTLLKHADTAMYEAKESGRN-AYRFFLPEMTQRVTRR 835 Query: 489 VLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQF 545 + +R A++ GDL L+ QP + G + ++ + G++ PD+F+P Q Sbjct: 836 LQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQS 895 Query: 546 NLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISP 604 L VL +VN+ L +++ + R+ P Sbjct: 896 GLIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNISALQFRRRDFVATVARVLGETGADP 955 Query: 605 QAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDG 664 + LEITE + + +QL G +A+DDFGTGY++ LKRL +KID Sbjct: 956 ARIELEITESALMDATPELVASFDQLVALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDR 1015 Query: 665 VFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRP 724 FV + N DA I + LA+ + VVAE VET+ Q+ L K G + +QGYL RP Sbjct: 1016 SFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRP 1075 Query: 725 QPLAD 729 + + Sbjct: 1076 LGVEE 1080 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 104/472 (22%), Positives = 186/472 (39%), Gaps = 23/472 (4%) Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR 338 + L T + ++ ++ + R + H QA DPLT LPN Sbjct: 233 EEELPVNITPLPITWLHHQIVPLGDGIAITARDISERKQKEAELHRQAFYDPLTELPNRT 292 Query: 339 ALEQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 Q+ + L +D + ++ G ++ +++I R L ++E Sbjct: 293 YFMNRLTKVLERAGRRQDFHYAVFFLDLDRFKVVNDSLGHLLGDEFLKAIARRLSSCLRE 352 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTGLDMGYGAAWGRFDG 446 + + +L G E ++L + + L S L Sbjct: 353 EDMVARLGGDEFAILLEELSNPDIVHRIAERLQRVLSAPFTLKQHELFTTASIGIALGTS 412 Query: 447 NQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLL 506 E + +L Q+ + ++ + + K+ L + +R A+++ + L Sbjct: 413 YYEQPEAILRDADIAMYQAKTQGKARHI-IFDQAMHTRAVKRWQLESDLRWAIERREFCL 471 Query: 507 YAQPIRNKEG---EGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWL 563 QPI + + G++ ++ G ++P +F+ + + L VL + L Sbjct: 472 VYQPIVSIQTERLIGFEALVRWHHPQRGWISPAEFISVAEETGLIIPLGHWVLWEGCRQL 531 Query: 564 ATHPCDK-------KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQA 616 SVNL Q ++ I ++ ++ + + LE+TE Sbjct: 532 RQWQSQFNLSPTAEPPLTVSVNLSSKQFCQPDLIHYIQQVLQQTGMEGTCLKLELTESIL 591 Query: 617 FSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLD 676 N ++ + QL + G ++A+DDFGTGY++ L R D++KID F+ I T + Sbjct: 592 MENLSTATSLLVQLKELGIQLALDDFGTGYSSLSYLHRFPLDVLKIDRSFINGIEAETEN 651 Query: 677 AMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 IVR+I LA++ +L VVAE VETQ Q L L Y QGYLI RP Sbjct: 652 LEIVRTILSLARSLNLQVVAEGVETQAQLDHLQALQCGYAQGYLISRPLTPE 703 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 95/465 (20%), Positives = 180/465 (38%), Gaps = 19/465 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y ++ + + + + + + QA D LT LPN Sbjct: 412 RRNGEVYPEWLSISAIPGPTGRTEYYVAVFHDITELKAKESQIQHQAHHDALTGLPNRAL 471 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L ++ + + +DN + ++ G M+ ++ + +++ + Sbjct: 472 LRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVRPQD 531 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHWNNTGLDMGYGAAWGRFDGNQ 448 L ++ G E ++VL E E + L +R + L +G F + Sbjct: 532 TLARVGGDEFVVVLQDVEGERDAAQVAERLLARFTDPVRVQEHELFVGASVGIALFPDDG 591 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 + L+ ++ ++ + +++ L + AL GD+ + Sbjct: 592 DDPDTLVRNADIAMSRAKEQGKRR-YHLFTPAMNDRAVRRLSLEGDLHRALAAGDITAHY 650 Query: 509 QPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + + ++ DG P +F+PL L +L Sbjct: 651 QPRVDLNTGLITGMEALARWIRADGSQEHPAEFIPLAESTGLIVPLGEHMLRLACAKTRA 710 Query: 566 HPCDKK-GPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM 624 +VNL +N+ G + + + P + LEITE ++ + ++ Sbjct: 711 LCDAGHADLHVAVNLSVHQFRHRNLVGMVADVLAETGLPPHLLELEITESTIVTDVDHTI 770 Query: 625 YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSIT 684 + QL + G +++DDFGTGY++ +LK L +KID F++DI + DA I +I Sbjct: 771 RKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRDIPDDPNDAAIAATII 830 Query: 685 DLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +A L VVAE VET +Q L G +QG+L RP P + Sbjct: 831 TMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDE 875 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 114/488 (23%), Positives = 200/488 (40%), Gaps = 22/488 (4%) Query: 257 KLRYPFLNLTWAVSTLCLLNYNQNF-LQGVETEYSLAFILAVLISFSVCLLYMVRIYHRS 315 P +N V + Q L E L+ + A + L + Sbjct: 588 YFGIPLVNSEQKVVGVLNGFSRQRMHLPPDAREI-LSIVAARAATELERLKADEALAEHR 646 Query: 316 EWLNRRWHLQALTDPLTLLPNFRALEQAPE--------QEAGKSFCCLRIDNLEFMSRHY 367 + + A DPLT LPN + E S + +D + ++ Sbjct: 647 K----QLSYLAFHDPLTQLPNRLRFTEVLEAAVGDAEGHGRYLSLLFIDLDRFKNINDSL 702 Query: 368 GLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSR 424 G + ++++ R L+ + L +L G E ++L T + S+ Sbjct: 703 GHSIGDKLLQAVARRTGSLIDSADVLARLGGDEFAILLFNCVTPVVGADTAQRVIDALSQ 762 Query: 425 QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQ 484 ++ L + + L+ ++ E ++ + Sbjct: 763 PFQIDDYSLHVSASIGITVAPVDAREPDELIKCADIAMFKAKDAGRN-TYKFYERSMNLK 821 Query: 485 TTKQVLLLNTIRTALDQGDLLLYAQPIRNKE---GEGYDEILARLKYDGGIMTPDKFLPL 541 T + +LL N +R AL + L LY QP + + G++ +L + G+++P +F+PL Sbjct: 822 THELLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPL 881 Query: 542 IAQFNLSARFDLQVLESLLKWLATH-PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY 600 + L +L S + + T + R +VN+ ++ + ++ ++ Sbjct: 882 AEETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQT 941 Query: 601 HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII 660 + + + LEITE + +SS+ + +L K G R+AIDDFGTGY++ LK+ + Sbjct: 942 GVPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSL 1001 Query: 661 KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL 720 KID FV D++T+ DA I S LA L VVAE +E Q+Q L + G Q+ QGYL Sbjct: 1002 KIDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYL 1061 Query: 721 IGRPQPLA 728 I RP P+A Sbjct: 1062 ISRPLPVA 1069 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 119/645 (18%), Positives = 224/645 (34%), Gaps = 45/645 (6%) Query: 119 RYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLI 178 + Q W + I + G +F L + DA + + T + Sbjct: 130 ERMLQSGLWYLASSIALIGLFASITGLYFTRRLNAISKVADA--------VQAGDTGRRV 181 Query: 179 YNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDF 238 R+ + ++ + + + ++ + + Sbjct: 182 DIKGSDEAARLAQEFNAMLDTLQQREQELVQSRDALRIAATAFESNDVMFVCDADWRILQ 241 Query: 239 IAGYLVPVFFIIFTLGVGKLRYPF-----------LNLTWAVSTLCLLNYNQNFLQGVET 287 + V + +GK + ++ + + Sbjct: 242 VNSAFQRVTGYLPEEAIGKAPRDLMGSGIQTQEFYEVMNESIRSNGSWQGEVWDRRKNGE 301 Query: 288 EYSLAFILAVLISFS---VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP 344 Y + + S S + + + + D LT+LPN R L Sbjct: 302 TYPAWTTITAVRSESGDVTHYVANLSDFSARKAAENEIKTLVYFDSLTMLPNRRMLMGRL 361 Query: 345 EQEAG--------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQL 396 E + + +D+ + ++ G ++ + L ++E + + +L Sbjct: 362 ETAMHAALSTGHLGALLFVDLDDFKTLNDTLGHHQGDILLQQVANRLQSCVREADTVARL 421 Query: 397 PGSELLLVLSGP---------ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGN 447 G E +++L G + E ++ LN + F Sbjct: 422 GGDEFVVMLEGLSKDVAEASTQAEAVAGKVMQALN-QPYDLGTLTRSSTPSVGITVFGKQ 480 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 QE+L L + Q+ A + + T + L +RTAL++ +LY Sbjct: 481 QESLDEPLKRADLAMYQAKAAGRNTS-RLFDPKTQAAVTLRADLEAALRTALEEEQFVLY 539 Query: 508 AQPIR--NKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QP + G + ++ G++ P +F+ + + VL + K LA Sbjct: 540 LQPQISEDVRVTGAEALIRWQHPTRGLVMPGEFIAVAEDCGMIVPIGNWVLNTACKQLAL 599 Query: 566 HPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ Q + +++ R+ + +EITE +N + Sbjct: 600 WATQPAFAHMTIAVNVSAKQFHQHDFVEQVLDALSRHGAQASGLKIEITESMLIANVDDV 659 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + +E+L G A+DDFGTGY++ LKRL D++KID FV+D++ +T DA I I Sbjct: 660 IVRMEELQHHGVGFAMDDFGTGYSSLTYLKRLPLDVLKIDQSFVRDVLVDTNDAAIANMI 719 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 LA + LSV+AE VET +Q L + G QGYL RP P+ Sbjct: 720 VALANSMGLSVIAEGVETVEQMQYLARHGCHAYQGYLFSRPVPVE 764 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 105/556 (18%), Positives = 211/556 (37%), Gaps = 25/556 (4%) Query: 197 QILWRRDIAPSLGKEKRAFTLSWLAALSVLLLL--LCTPYENDFIAGYLVPVFFIIFTLG 254 ++ + E + +L + + V ++ + I I ++ Sbjct: 372 ITTKKQAENALIEAESKYRSLVEKSIVGVYIIQKNIILYANPYLIDMLGYKEAIIGMSIW 431 Query: 255 VGKLRYPFLNLTWAVSTL----CLLNYNQNFLQGVETEYSLAFIL-AVLISFSVCLLYMV 309 + + + L + + L + ++ S ++ + Sbjct: 432 DIVYPDDYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIMYQGSPAVIGTI 491 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQ--------EAGKSFCCLRIDNLE 361 + A D LT LPN R E+ E + L +D + Sbjct: 492 LDVTERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMYLDMDRFK 551 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL 421 +++ G + + + + L ++E + ++ G E ++L + + Sbjct: 552 YINDSLGHAVGDQLLIAFSKRLQEQIRETDFAARMGGDEFTVILPHIRDNNSAIEVARRI 611 Query: 422 NSR---QIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSRE 478 R + + L + + + + L+ ++ Sbjct: 612 IERTREPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKN-GYQIFT 670 Query: 479 EMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTP 535 ++ QT K L +R A+ + +L +Y QP N E G + ++ + G+++P Sbjct: 671 SSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWNHPEWGLVSP 730 Query: 536 DKFLPLIAQFNLSARFDLQVLESLLKWLATHP-CDKKGPRFSVNLMPLTLLQKNIAGRII 594 ++F+P+ + L V ++ + K S+N+ L K+ I Sbjct: 731 NEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLSKDFMDAIQ 790 Query: 595 RLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKR 654 ++ + P + +EITE NAE+ M+ ++ L+K G I++DDFGTGY++ LKR Sbjct: 791 QILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTGYSSLSYLKR 850 Query: 655 LQ--ADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLG 712 + +I+KID F+ D+ + D I+ +I LA+ ++SVVAE VET +Q +L L Sbjct: 851 FKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQLHILKLLK 910 Query: 713 VQYLQGYLIGRPQPLA 728 +QGYL RP Sbjct: 911 CDLVQGYLFSRPVQAE 926 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 98/465 (21%), Positives = 182/465 (39%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLISFS-----VCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNF 337 + + Y ++ + + + R R A DPLT LPN Sbjct: 508 RKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDISLQREAQERIQRLAHFDPLTDLPNR 567 Query: 338 RALEQAPEQ--------EAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE 389 L + ++ + L +D+ + ++ G + + ++ R L L+ Sbjct: 568 VLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGP 627 Query: 390 NEKLYQLPGSELLLVLSGPETEGRLQHMVNIL--NSRQIHWNNTGLDMGYGAAWGRFDGN 447 + + +L G E LL+L + +L ++ + L + Sbjct: 628 QDTVSRLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPAD 687 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 E+ L + + + +T + + + N +R AL++ L+ Sbjct: 688 GESFDTLYQRADAAMYSAKQSGRNR-YGFFTADLQARTARALQIENALRRALERQQFELH 746 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + + G + +L + G++ P +F+P+ VL + + Sbjct: 747 YQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAK 806 Query: 565 THPCDKKGPR-FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 + R SVNL + + + R ++ + + + LE+TE A + ++ Sbjct: 807 RWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAA 866 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + ++QLH G R+++DDFGTGY++ LKR Q +KID FV+D+ + D IV +I Sbjct: 867 LAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAI 926 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A+A + AE VET Q L G QGYL RP P Sbjct: 927 IRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPAD 971 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 95/446 (21%), Positives = 178/446 (39%), Gaps = 17/446 (3%) Query: 300 SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFR--------ALEQAPEQEAGKS 351 + + + + + R AL DPLT LPN AL+ A + Sbjct: 627 GEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVA 686 Query: 352 FCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETE 411 L +D+ + ++ +G + + L ++E++ + +L G E ++L + Sbjct: 687 LLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSP 746 Query: 412 GRLQHMVNIL---NSRQIHWNN-TGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 + + + + +N + +G + + T + L+ Q ++ Sbjct: 747 DDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKH 806 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN---KEGEGYDEILA 524 E + + ++ L + A+ + ++ QP + + G + +L Sbjct: 807 DGRD-GYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLR 865 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCD-KKGPRFSVNLMPLT 583 + G++ P +F+ + + L VL + +VNL PL Sbjct: 866 WDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQ 925 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 L ++ I + + LE+TE E ++ ++ L + G RIAIDDFG Sbjct: 926 LHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFG 985 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TGY++ LK+ D++KID FV+DI D I +I + + L+V+AE VET+ Sbjct: 986 TGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKA 1045 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLAD 729 Q L + G Y QGYL P P + Sbjct: 1046 QLEFLEQQGCDYYQGYLYSMPLPAEE 1071 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 98/476 (20%), Positives = 187/476 (39%), Gaps = 26/476 (5%) Query: 279 QNFLQGVETEYSLAFILAVLISFSVCLLYMV---RIYHRSEWLNR-------RWHLQALT 328 QN+ S+ +L + + + R + + Sbjct: 220 QNYQDENGENVSVEKTATLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHY 279 Query: 329 DPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 D LT LP + + L +D + ++ G + ++ + Sbjct: 280 DTLTGLPQRDFFFDLLHSHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVA 339 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI---LNSRQIHWNNTGLDMGY 437 + L ++ + L ++ G E L+ L + + + + S + + + Sbjct: 340 QRLQNNIRITDNLSRMSGDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTA 399 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F G+ + + LL ++ A + ++ + + L +R Sbjct: 400 SIGISLFPGDATSPEKLLSCADSAMYRAKESGRD-AFRFYKPHMNEKAQGLLWLETELRL 458 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 A++Q L L+ QP + + G + ++ + G++ P +F+P + +L Sbjct: 459 AIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEW 518 Query: 555 VLESLLKWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + + +A R +VN+ + + ++A + +L Y + + LEITE Sbjct: 519 VLNTACRQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITE 578 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 + E++ + +L G +++IDDFGTGY++ LKR +KID F+ D+ N Sbjct: 579 SVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFINDVTIN 638 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 DA I SI LA + V+AE VET +Q + L + QY QGYL RP P D Sbjct: 639 EQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKD 694 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 110/505 (21%), Positives = 195/505 (38%), Gaps = 26/505 (5%) Query: 249 IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSVCL 305 F ++ + + + Y + + Sbjct: 395 PRLLSSGRHDAAFFRDMWETIHRVGGWQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHY 454 Query: 306 LYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRI 357 + + + A D LT LPN L + + + + Sbjct: 455 VGTHYDITERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDL 514 Query: 358 DNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP--------- 408 DN + ++ G + + LL ++E + + ++ G E ++VLS Sbjct: 515 DNFKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAAS 574 Query: 409 ETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAH 468 ETEG + ++ L SR + T F G++ ++ LL Q +S Sbjct: 575 ETEGAAEKVLTAL-SRPYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDLAMYKSKES 633 Query: 469 HHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR--NKEGEGYDEILARL 526 A+ + + ++ L +R A+D+ LL++ Q G + ++ Sbjct: 634 GRN-AICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEALVRWQ 692 Query: 527 KYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH--PCDKKGPRFSVNLMPLTL 584 G++ P +F+PL + L +VL++ + LA D+ +VN+ L Sbjct: 693 HPQHGLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQL 752 Query: 585 LQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGT 644 + + ++ R P + LE+TE N E + + L G ++DDFG Sbjct: 753 RENSFVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGV 812 Query: 645 GYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQ 704 GY++ LKRL +KID FV+D++ + DA+I R+I LA++ L V+AE VETQ Q Sbjct: 813 GYSSLSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQ 872 Query: 705 QALLHKLGVQYLQGYLIGRPQPLAD 729 + L G QGYL RP P+ D Sbjct: 873 RQFLADAGCHAYQGYLFCRPLPIED 897 >UniRef50_A3JAM8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAM8_9ALTE Length = 756 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 107/474 (22%), Positives = 203/474 (42%), Gaps = 22/474 (4%) Query: 277 YNQNFLQGVETEYSLAFILAVLIS-FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLP 335 + + + T + + + + + + +VR + + A DPLT LP Sbjct: 274 HELDAINKYGTVFPIEIGMTQMPPLGDIDFVVIVRDITQRKKREDEIRQLAYYDPLTRLP 333 Query: 336 NFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLM 387 N R L+ Q + L +DN + ++ G + + L+ + Sbjct: 334 NRRLLKDRLQQVIANCGRQSRYAALFFLDLDNFKNLNDSLGRTKGDLLLCQVAARLIESV 393 Query: 388 QENEKLYQLPGSELLLVLSGPETEGRLQHM--------VNILNSRQIHWNNTGLDMGYGA 439 + + + +L G E ++++ G ++ + +N+ +++ + + + Sbjct: 394 RHGDTVSRLGGDEFVVLIEGLSSDRNEAAVQVEAAAGKINVQLTQKFDLDGSPYNGSASI 453 Query: 440 AWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTAL 499 F+ N +L+ LL Q ++ A H ++ + + + + + + AL Sbjct: 454 GVTTFNSNDSSLEDLLKQADMALYKAKAADH-SSVHFFDPQMQVVASLRAAMQQDLYEAL 512 Query: 500 DQGDLLLYAQPIRNKE--GEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLE 557 + L+ Q ++ G + +L G ++P +F+PL + L VL Sbjct: 513 RKNQFQLHYQKQIDQHEGLIGVEALLRWAHPTKGFISPAQFIPLAEETGLIVPIGEWVLR 572 Query: 558 SLLKWLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQ 615 + LA D K +VN+ + +K+I ++ P + LEITE Sbjct: 573 EACQTLAQWASDPAKANLTIAVNISVVQFNKKDIVHTVLNALNASGAKPHNLKLEITESL 632 Query: 616 AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTL 675 S+ E+ + +L + G +IDDFGTGY++ LK+L +KID FV+DI+ + Sbjct: 633 LASDVENVKVKMLELQRHGVTFSIDDFGTGYSSLFYLKQLPLHQLKIDQSFVRDIINSPN 692 Query: 676 DAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 D I +++ LA A L+V+AE VET+ Q+A+L LG QGYL G+P L D Sbjct: 693 DQAIAQAVITLAIAMHLNVIAEGVETEAQRAMLQDLGCGAYQGYLFGKPCALQD 746 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 642 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 115/600 (19%), Positives = 216/600 (36%), Gaps = 35/600 (5%) Query: 164 FTVVDLLSLFTAVLIYNM-------LFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFT 216 + + + + A+ I L + + I +R E Sbjct: 462 YPLCEGERVLGALTIGAARPGDLDQAGTALLKELAEDLAFGIATQRTAVARREAEVALRL 521 Query: 217 ---LSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLC 273 ++ VL+ L + + P L + + Sbjct: 522 RERAIESSSDGVLIFALGDDGPRIRDVNPAAERILGMARALLVDAPAPALTVFAPGALAE 581 Query: 274 LL---------NYNQNFLQGVETEYSLAFILAVLIS-FSVCLLYMVRIYHRSEWLNRRWH 323 L + + + + LA + + ++ +V+ R Sbjct: 582 LGVALVCGRETHLEVEGERADGSPFWCECALAPVRAAGDAHVVCVVKDVTERVLYLRELE 641 Query: 324 LQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHC 375 QA D LT LPN L+ E + +D+ + ++ + G Sbjct: 642 RQAKYDGLTGLPNRYLLDDRLEQAIVAARRHERLLGVAFIDLDHFKVVNDNVGHRQGDEL 701 Query: 376 IRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNIL---NSRQIHWNNTG 432 +R L ++++ + + G E +++L E ++ L + ++ Sbjct: 702 LRQAASRLAAVLRDGDTAARQGGDEFVVLLPDLGDERDAFRILGRLQAALAEPFRLDDRS 761 Query: 433 LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLL 492 + + + LL Q+ A + ++ Q ++ L Sbjct: 762 FFVTCSIGVSLYPRDGGDGDTLLKHADIAMYQAKAAGRNVV-RFFTAEMNIQVRDRLQLE 820 Query: 493 NTIRTALDQGDLLLYAQPIRNK---EGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSA 549 +R+AL+ G+L L QP + + G + +L + G + P +F+PL + L Sbjct: 821 GALRSALENGELHLAFQPQVDGGSGQVIGAEALLRWQHPELGAVPPVRFIPLAEETGLIG 880 Query: 550 RFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVIL 609 VL + + + R +VN+ ++ RI + + P + L Sbjct: 881 PIGEWVLRAACRQARQWEQAGRRLRIAVNVSARQFRSPDLPARIAEILDETGLPPALLEL 940 Query: 610 EITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKD 669 E+TE +AE + + +L + G +A+DDFGTGY+++ L+R D +KID FV+ Sbjct: 941 ELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGTGYSSFAYLQRFPIDTLKIDQSFVRS 1000 Query: 670 IVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 +V IV +I LA + + V+AE VET QQ L + G LQGYL GRP P A+ Sbjct: 1001 MVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAE 1060 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 112/595 (18%), Positives = 216/595 (36%), Gaps = 36/595 (6%) Query: 149 FPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSL 208 PL+ A+ V+ + F L + P + + Sbjct: 115 LPLERLGASPSPAAVLAAVETIRKTAEKKSAVPGFDCLVQ----PVYFDYERVGTVVIHA 170 Query: 209 GKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWA 268 E L W A +++L +L+ F A + P L+L + Sbjct: 171 DTELFRKNLRWTATVTLLFMLVTVIAAYFFSAKLQQM------------ISRPLLDLLSS 218 Query: 269 VSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALT 328 + + ++N+ V L + F+ L + A Sbjct: 219 MKDVS---ASKNYAIRVAKPSDDEIGL-LYDGFNEMLSEIEERNQILRQRQAHLQQLAHY 274 Query: 329 DPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSIC 380 DPLT LPN S + +D+ + ++ G + + Sbjct: 275 DPLTRLPNRTLFYDRLAQALNQAERNRQALSVIFIDLDHFKDINDTLGHRTGDLLLIDVA 334 Query: 381 RTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGY 437 L +++ + + +L G E + + LN+ + + + + Sbjct: 335 NRLSTVVRSCDTVARLGGDEFTVFTQNVMNADNAAIVAAKLNALFAKPFQLGESEIYVTA 394 Query: 438 GAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRT 497 F + +T+ LL + A + + ++ ++V LL+ +R Sbjct: 395 SIGVTLFPNDGKTVDELLMNADIAMYHAKACGKNV-YKMFDRKMNEHANERVTLLSDLRL 453 Query: 498 ALDQGDLLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQ 554 AL++ + +L+ QP + + ++ + G++ PDKF+ L + Sbjct: 454 ALEREEFVLHYQPKVDLLTGNVTSVEALVRWMHPRLGMLAPDKFIRLSEESGFIVELTDW 513 Query: 555 VLESLLKWLATHPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITE 613 VL + G R +VNL P ++++ I + + P + +EITE Sbjct: 514 VLRTACTQAKKWQEQNLGSVRVAVNLSPYHFQRQDVKEAIFSVLDATGLEPALLEIEITE 573 Query: 614 EQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTN 673 N E + +L + G I++DDFGTGY++ L R + +KID F+ +++ + Sbjct: 574 SALMQNDEYTCALFRELRELGMTISVDDFGTGYSSLSYLHRFPINTLKIDRTFILNMMKS 633 Query: 674 TLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 + D IV +I +AK+ ++ +VAE VET Q L G +QG+L+ RP Sbjct: 634 SEDQAIVTAIIAMAKSLNMQIVAEGVETVDQLEKLKDQGCHEIQGFLVSRPVAAE 688 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 95/469 (20%), Positives = 182/469 (38%), Gaps = 25/469 (5%) Query: 283 QGVETEYSLAFILAVLI---SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + Y+ + ++ + + + H A D LT LPN R Sbjct: 231 RKSGQIYAELLTITAIVASGGITTHYVASFSDITEDKQAEAEIHRLAYYDALTRLPNRRL 290 Query: 340 LEQAP--------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L+ + + +DN + ++ G + + + + L ++E + Sbjct: 291 LQDRLGQALAAAARHGLYGALFFIGLDNFKTLNDTRGHDVGDLLLVEVAQCLRAQVREGD 350 Query: 392 KLYQLPGSELLLVLSGP-----ETEGRLQHMVNILN---SRQIHWNNTGLDMGYGAAWGR 443 + +L G E +L+L G E + + + L SR + Sbjct: 351 TVARLGGDEFVLLLDGVSGNADEAAAVAKEVGDKLREATSRPFSLDGQEYRCKLSIGVSL 410 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F +T++ L + Q+ L + + + L + + AL Sbjct: 411 F-AALDTVEELFKRADLALYQAKNAGRDR-LRFFDPAMQAAMDLRGALESDLHQALALDQ 468 Query: 504 LLLYAQPIRN--KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLK 561 L L+ QP + G + +L G+++P++F+PL L +LE+ Sbjct: 469 LRLHYQPQIDTAGRVIGVEALLRWWHPQRGLVSPNEFVPLAESTGLILPIGRWILETSCV 528 Query: 562 WLATHPCD--KKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + D + + +VN+ Q + ++ R K +P + LE+TE N Sbjct: 529 LIKNWESDACTRSLQVAVNVSARQFRQADFVEQVKRSLKASGANPARLKLELTESVLLKN 588 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 E ++ + + + G ++DDFGTGY++ L +L D +KID FV+ + + I Sbjct: 589 VEDTIAKMLAIKRLGVAFSLDDFGTGYSSLSYLAQLPLDQLKIDQSFVRKLPGARKEETI 648 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 R+I + + ++V+AE VE++ Q+ L G QGYL RP P+ Sbjct: 649 ARTIITMGRELDMNVIAEGVESEAQRQFLEAHGCHAFQGYLFSRPLPVE 697 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 99/465 (21%), Positives = 186/465 (40%), Gaps = 20/465 (4%) Query: 283 QGVETEYSLAFILAVLIS---FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRA 339 + L ++ + + + + + + + A DPLT LPN Sbjct: 623 RKDNHIIPLICSISAVRNDKQQLTHYVSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTL 682 Query: 340 LE--------QAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 L A + L +D + ++ +G + ++ + R L ++ ++ Sbjct: 683 LTINLSHAIDLAVRNHHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISD 742 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNSR---QIHW-NNTGLDMGYGAAWGRFDGN 447 + +L G E +++ G ++H + N + +G + + Sbjct: 743 TICRLGGDEFTVLIEGNPALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEH 802 Query: 448 QETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLY 507 +T + LL Q ++ AH + ++ +++ L ++ AL +L LY Sbjct: 803 GQTPKELLQQADAAMYRAKAHGR-SCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLY 861 Query: 508 AQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLA 564 QP + G + ++ G+++P +F+P+ + L + VL + Sbjct: 862 FQPQIDISSNRIIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGK 921 Query: 565 THPCDKKG-PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESS 623 +VN+ P+ NI + K+ + LE+TE ++ + Sbjct: 922 EWQQKGLPAINLAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEA 981 Query: 624 MYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSI 683 + + L K+G R+AIDDFGTGY++ LKR D++KID FV DI D I +I Sbjct: 982 VEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAI 1041 Query: 684 TDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +A L V+AE VET++Q L + G QGYL+ P P Sbjct: 1042 VAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVPAD 1086 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 99/446 (22%), Positives = 188/446 (42%), Gaps = 23/446 (5%) Query: 305 LLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLR 356 L ++V L + H A D LT LPN R L + L Sbjct: 469 LFFIVHDITERRHLEEKMHDLAFYDLLTKLPNRRLLLDRLEKALLSGTRSRHHSALMFLD 528 Query: 357 IDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGP-----ETE 411 +D+ + ++ +G + + + +L ++E + + G E ++++ + Sbjct: 529 LDHFKVLNDLHGHDIGDQLLVEVANRILGCIREQDSAARFGGDEFVVMIEDLSENLSDAV 588 Query: 412 GRLQHMVNIL---NSRQIHWNNTG----LDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQ 464 + + + + F ++E L+ LL Sbjct: 589 NQADSVAEKIRCALAAPYLLKRGEEVISHHCSSSIGVTLFRDHEENLEQLLKWTDMAMYH 648 Query: 465 SCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRN--KEGEGYDEI 522 + + + + ++ + L N + TAL++ L+ Q + EG + + Sbjct: 649 AKDAGRNV-IRFFDPVMQTAIENRAALENDLHTALEERQFELFYQIQVDRDGRAEGAEVL 707 Query: 523 LARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPL 582 L G+++P +F+PL L VL+++ +A +++ +VN+ Sbjct: 708 LRWRHPQRGLVSPAQFIPLAEDTGLIVPIGEWVLDTVCAQIAKWQGEQRNLVIAVNVSAK 767 Query: 583 TLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDF 642 Q N + ++ +R+ +SP + LE+TE N + ++ ++ L FG ++DDF Sbjct: 768 QFRQSNFVELVQQIIQRHQVSPALLKLELTESLVLDNIQDTIDKMKVLKAFGVSFSMDDF 827 Query: 643 GTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQ 702 GTGY++ LK+L D IKID FV+DI T+ D ++V++I DL + V+AE VE++ Sbjct: 828 GTGYSSLSYLKQLPLDQIKIDQSFVRDIATDKTDLVMVKTIVDLGVNFEMDVIAEGVESE 887 Query: 703 QQQALLHKLGVQYLQGYLIGRPQPLA 728 Q LL + G QGYL +P P+ Sbjct: 888 VQLGLLKQCGCSRFQGYLFSKPVPVE 913 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 105/501 (20%), Positives = 197/501 (39%), Gaps = 29/501 (5%) Query: 251 FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-SFSVCLLYMV 309 G G+ R + + S +Y + + + + +L +V Sbjct: 511 DLTGRGQWRALWEQIKVLNSMTIEGHYKT----RSGRTFPVEVSVNYFVYGGREYVLSLV 566 Query: 310 RIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP--------EQEAGKSFCCLRIDNLE 361 R + + + A D LT LPN R L + L +D + Sbjct: 567 RDVTERKEVEAQIRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTREYGALMILDLDRFK 626 Query: 362 FMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGR-----LQH 416 ++ G + + + R L +++N+ + +L G E ++VL G ++ + Sbjct: 627 TLNDTQGHDVGDRLLIDVARRLTASVRQNDTVCRLGGDEFVVVLEGFGSDEDQAVTQAEA 686 Query: 417 MVNILNS---RQIHW--NNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHV 471 + + + + N + F G+ T LL Q Q+ Sbjct: 687 IAEKVRAALNQPYSLSGNGSRFHSTTSVGLTLFCGHDATADMLLKQADVALYQAKDAGRN 746 Query: 472 LALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKE--GEGYDEILARLKYD 529 L + ++ + +R AL++ + +Y QP ++ G + +L Sbjct: 747 LV-RFFNPAMQAAIDTRMAMEAALRQALERDEFHVYYQPQVDQRERVIGAEALLRWRPQG 805 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK--GPRFSVNLMPLTLLQK 587 ++P +F+PL + L VL+ L D + + +VN+ + Sbjct: 806 NEAISPLEFIPLAEETGLILPIGKWVLDVACAQLKAWESDPRAAHLKIAVNVSARQFHEP 865 Query: 588 NIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYA 647 + + R + P + LE+TE E+ + +E+L+ G +DDFGTGY+ Sbjct: 866 DFVATVQDSLARSGVDPTRLQLELTESVVLEKIETVVSRMEELNALGVSFCLDDFGTGYS 925 Query: 648 NYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQAL 707 + LKRL D +KID FV+D+V ++ DA IV++I ++++ L+V+AE VET Q+ Sbjct: 926 SLSYLKRLPLDQVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIAEGVETHAQRDF 985 Query: 708 LHKLGVQYLQGYLIGRPQPLA 728 L QG+L P P+ Sbjct: 986 LAGK-CLGYQGFLFCEPIPIE 1005 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 98/349 (28%), Gaps = 43/349 (12%) Query: 33 PLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGS 92 P ++I ++ I L P + F W + +L + +W ++ + + Sbjct: 176 PASLIAAASIGLVAEPT-----LRLRFSWSYWLFLLSLVGSATVWMIWNTWALRGETVAN 230 Query: 93 QTF-VVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPL 151 V A+ W+ G + W+R W + + ++ L GS Sbjct: 231 IRVDAVFSLTALGMGVATLYWQVGASPNLHWER--WSQAIVRVLPLATVVLAGSAVVLLG 288 Query: 152 KISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKE 211 + + T+ L + A+L ML ++ + + R+ Sbjct: 289 DRTDVSATSRTAVTIASLTVIVLAMLRQGMLLREHAQLKIVTRNLEESERQKNLILHTLP 348 Query: 212 KRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPV-----FFIIFTLGVGKLRYPFLNLT 266 L WL + + +C P F + F I+ K R Sbjct: 349 D----LVWL-KDADGVYQMCNPAFERFTGRTEAEMRGKTDFDIVGPELARKFRNEDAQAM 403 Query: 267 WAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQA 326 A L ++ Q S+ L + +L + R + + + Sbjct: 404 LADHPLTSMHALQAVDGRDVQIESVKTTLRDRDRRVLGILGIARDVTERQRASEQLA--- 460 Query: 327 LTDPLTLLPNFRALEQAPEQEAGKSFCCLRID---NLEFMSR----HYG 368 L NF A + D +++ G Sbjct: 461 -------LVNF-----ALNHVKEAALLA---DENAQFHYVNDEACRSLG 494 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 116/740 (15%), Positives = 227/740 (30%), Gaps = 41/740 (5%) Query: 29 RFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPV----LCGMFCTNLWNFHLSFL 84 R P I + +L + + L G P + L +L Sbjct: 188 RRFEPFDWIIGAGEYLYQIEADLQAEALKRIGAISFHPDGVIGVTTADGRILVEPNLLAQ 247 Query: 85 QTAVMLGSQTFVVLCACAILRWQLGTRWRYG-----LTSRYVWQRLFWLGLVTPIGIKCS 139 +A G + A R + QR + Sbjct: 248 PSARHAGLPEQPAVPWTAAAREVIQRNGGGRLQFSLPGPDGRAQRRLGYAVEHAGWQWYL 307 Query: 140 MYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQIL 199 + VG + ++ L AV + L Sbjct: 308 VASVGLDGLDAALEHERDEVRNTARHRLEFTLLLLAVASTVAVIVSLAFSSWIGRRFASY 367 Query: 200 WRRDIAPSLGKEKRAFTL------SWLAALSVLLL-----LLCTPYENDFIAGYLVPVFF 248 + E + L ++++L + +AG Sbjct: 368 RGEIAQRNAALEAKNRELQLAARVFECGNEAMMVLDADHRFITVNSACAQLAGLDAAALR 427 Query: 249 --IIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVL---ISFSV 303 L + + ++ + + ++ + + Sbjct: 428 GRPAAQLLNDHDGAGWERIARELAEQGAWSGEVTVRREDGPTLPAQLSVSAVLNSAGGAT 487 Query: 304 CLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKS--------FCCL 355 + + + A D LT LPN L + + Sbjct: 488 HYVGALTDMSAHKQTEALLRHMAEYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFI 547 Query: 356 RIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQ 415 +D + ++ G + +R + L L+ + + + G E +++L+ Sbjct: 548 DLDRFKNVNDSLGHSVGDALLRQAAKRLASLLHGGDTIARPGGDEFVMLLAEITDRAVAA 607 Query: 416 HMVNILN---SRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVL 472 + + S + L + + LL + Sbjct: 608 NRAAQIIDAFSTPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRN- 666 Query: 473 ALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILARLKYD 529 + +S + +++ L N +R A+ + + ++ QP + G + ++ + Sbjct: 667 TYRFFTDEMSLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPE 726 Query: 530 GGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK-GPRFSVNLMPLTLLQKN 588 G++ P++F+PL L +VLE+ +VN P+ + N Sbjct: 727 RGLIAPERFIPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGN 786 Query: 589 IAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYAN 648 A + + + + + +E+TE ++A + L G R+AIDDFGTGY++ Sbjct: 787 FAETVAEVLAETGLPARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSS 846 Query: 649 YERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALL 708 LKR Q D +KID F+ D+ + DA I +I +A++ +SV+AE VET Q+ L Sbjct: 847 LAYLKRFQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFL 906 Query: 709 HKLGVQYLQGYLIGRPQPLA 728 G QGYL P P+ Sbjct: 907 VDQGCAEGQGYLFSPPVPVE 926 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 114/565 (20%), Positives = 214/565 (37%), Gaps = 33/565 (5%) Query: 196 AQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII----- 250 A +L RDIA E++ L S +++ E D Y+ P F I Sbjct: 351 ADLLSLRDIAERKASEQQLRLLKESLEASFNGVVIVDAIEPDMPVIYVNPAFERITGYSE 410 Query: 251 ---------FTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLI-- 299 G + + +S ++ + + ++ + Sbjct: 411 AEMLGRNCRILQGNERDSLQIEEIHRGLSQAENVHVVIRNFRKDGQPFWNDLYISPIFNA 470 Query: 300 -SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQE--------AGK 350 + + + A D LT LPN LE Q Sbjct: 471 QGNVTHFIGVQNDITEQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKMALRQKHSL 530 Query: 351 SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPET 410 + + +D + ++ G + + + + ++ + + ++ G E +++L + Sbjct: 531 AILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIILLVDLKL 590 Query: 411 EGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCA 467 E + + + L + R H L + DG+ E L+ Q ++ Sbjct: 591 ENDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLAMYKAKQ 650 Query: 468 HHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIR---NKEGEGYDEILA 524 ++ + ++V L N ++ A++ LY QP + + G + +L Sbjct: 651 EGRN-NYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQVIGLEALLR 709 Query: 525 RLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDK-KGPRFSVNLMPLT 583 G ++P F+P+ VLE+ + L P +VN+ + Sbjct: 710 WQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPSVAVNISTVQ 769 Query: 584 LLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFG 643 + N + ++Y + + + +EITE F N E ++ +++L + G I+IDDFG Sbjct: 770 FRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNISIDDFG 829 Query: 644 TGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQ 703 TG+++ LK L D +KID FV++I T++ DA I + I +A L+VVAE VET+Q Sbjct: 830 TGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEGVETEQ 889 Query: 704 QQALLHKLGVQYLQGYLIGRPQPLA 728 Q L + QGY +P P Sbjct: 890 QFKFLQQSNCDQYQGYYFAKPMPFE 914 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 100/469 (21%), Positives = 179/469 (38%), Gaps = 29/469 (6%) Query: 277 YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPN 336 Y E E L + A L ++ + R A D LT LPN Sbjct: 305 YAHEVATPCEQEQELIAMAAHLAGIAI----------ERKRAEDRISFLAHHDALTGLPN 354 Query: 337 FRALEQA-------PEQEAGKSFC-CLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQ 388 E+ + + L +DN + ++ G ++++ + ++ Sbjct: 355 RVLFEEQVDGMLEEIRERDQCAVLAFLDLDNFKLINDSLGHAAGDELLKAVAGRMRASVR 414 Query: 389 ENEKLYQLPGSELLLVLSGPETEGRL-----QHMVNILNSRQIHWNNTGLDMGYGAAWGR 443 + + + ++ G E +++L+G E + + + + + + + L + Sbjct: 415 KADFVVRVGGDEFIILLNGLPKERDIVLSRLEDIRSAI-AMPLQLQGRSLQVSCSMGVAC 473 Query: 444 FDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGD 503 F T LL ++ + E ++ + +++ +R AL + Sbjct: 474 FPNQGRTAGELLANADMAMYRAKELGRD-NIQVFTEEMAARAHERLQWQEELREALAGEE 532 Query: 504 LLLYAQPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLL 560 LL+ QP N + +L GI++P F+PL + L L + Sbjct: 533 FLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRAAC 592 Query: 561 KWLATHPCDK-KGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSN 619 + L SVN+ ++N A R+ + K + + + LE+TE + Sbjct: 593 RQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKETGLEARYLELELTESLIMQD 652 Query: 620 AESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMI 679 ++ + L G +AIDDFGTGY++ LKR +KID FV DI + D I Sbjct: 653 VPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAI 712 Query: 680 VRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLA 728 +I LA+ L V+AE VE++ Q L K G +QGY RP Sbjct: 713 TSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAE 761 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 640 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 93/484 (19%), Positives = 184/484 (38%), Gaps = 20/484 (4%) Query: 261 PFLNLTWAVSTLCLLNYNQNFLQGVETEYSLA-FILAVLISFSVCLLYMVRIYHRSEWLN 319 PF + + + + + G S+ L +++ V + + Sbjct: 212 PFQQVMVTGQPVFDVQHAIEWADGTRKYLSVNGAPLKDADGVITHIVFSVTDISHHKHVE 271 Query: 320 RRWHLQALTDPLTLLPNFRALEQAPEQEAG---------KSFCCLRIDNLEFMSRHYGLM 370 + AL D LT LPN + + L +D + ++ G Sbjct: 272 EQLCHDALHDNLTRLPNRTLFMERVNHAIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHD 331 Query: 371 MRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIH 427 + + + R L ++ + + L G E ++L + + + + + Sbjct: 332 VGDQLLTATARQLEKCVRTTDTVAHLSGDEFTILLEDIKDIKDATRVAERIQATLKAPFN 391 Query: 428 WNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTK 487 NN + E + +L ++ + ++++ + + Sbjct: 392 LNNHEVFTSASIGIALSSTGYERSEDILRDADIAMYRAKELGKAR-HEIFDKIMHARALE 450 Query: 488 QVLLLNTIRTALDQGDLLLYAQPI---RNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQ 544 + L N +R AL++ + +Y QPI G++ ++ + G+++P +F+P+ Sbjct: 451 LLRLENDLRRALERQEFEVYYQPITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAED 510 Query: 545 FNLSARFDLQVLESLLKWLATHPCDKK---GPRFSVNLMPLTLLQKNIAGRIIRLFKRYH 601 L VL + L + SVNL + + ++ +I + Sbjct: 511 TGLIIPLGEWVLHEACRQLRMWHTQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETG 570 Query: 602 ISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIK 661 + + LEITE NAE+ + QL ++++DDFGTGY++ L R + +K Sbjct: 571 LDGSFLKLEITESILMENAETVTKMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLK 630 Query: 662 IDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLI 721 ID FV + + I+R+I LA + + V+AE VET +Q L L + QGYL Sbjct: 631 IDRSFVSKMNPKNRNTEIIRTIITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLF 690 Query: 722 GRPQ 725 +P Sbjct: 691 SKPL 694 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 111/695 (15%), Positives = 233/695 (33%), Gaps = 32/695 (4%) Query: 56 LFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYG 115 L + G V G+ S+ + A T V + I R Sbjct: 57 LHVLGVALVATAAIGIGIAVWLLPWGSWSRRA----PLTLVPVAFTLIAIHNYFARDEPA 112 Query: 116 LTSRYVWQRLFWLGLVTP--IGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLF 173 + W+GL P + ++ ++ PL ++ V Sbjct: 113 RFGLFFIVTFTWIGLACPRWTSLPFVPLMIVAYVT-PLVVTGTSIATALSAAVCTAPVCV 171 Query: 174 TAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTP 233 + L S +++ +R + + +S + + Sbjct: 172 LVAEAIAWVGARLRVAQRSLRESEVRFRSLVQHASDVVAVLGPDGTARYVSPAIQHVLGY 231 Query: 234 YENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAF 293 D I + + A+ + + + + Sbjct: 232 RPEDLIGTSVFDRIHPDDLPHARAQLTEIVLGRGAMPPT-----QFRYRRADGSWVYVEA 286 Query: 294 ILAVLISF--SVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAP------- 344 L+ ++ R + + QA DPLT LPN L++ Sbjct: 287 TATNLLDNPAVGGIVINARDISERKRFEKELVHQAYHDPLTGLPNRVFLQRRLADSLAQA 346 Query: 345 -EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLL 403 + + + +DN + ++ G + + + LL ++ + + G E ++ Sbjct: 347 ARERTRVALLFIDLDNFKLINDSLGHDAGDRVLSELGKRLLGCIRCGDMAARFGGDEFMV 406 Query: 404 VL---SGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSW 460 ++ G + + + + L + + + L+ Sbjct: 407 LINGTPGTDAALAAADRLAATLAEPFVVDGHELVITTSIGVALGGDPDDRPEDLIRNADA 466 Query: 461 LAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEG-- 518 ++ + + + Q +++ L +R L++G+ +Y QP+ + Sbjct: 467 AMHRAKLLGKARRV-VFDPAMYAQAVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPV 525 Query: 519 -YDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKK---GPR 574 + ++ + G+++P +F+P+ + L VL + LA Sbjct: 526 EVEALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSA 585 Query: 575 FSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFG 634 SVNL ++ I ++ + P ++ LEITE + S++ + L + G Sbjct: 586 VSVNLSARQFRHPSLTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLG 645 Query: 635 FRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSV 694 ++A+DDFGTGY++ LKR D +KID F + + + D +V ++ A A L V Sbjct: 646 VQLAVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQV 705 Query: 695 VAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD 729 E VET++Q L ++G +QG+L P P + Sbjct: 706 TVEGVETEEQLEFLERVGCDLVQGFLFAPPMPPDE 740 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 93/463 (20%), Positives = 188/463 (40%), Gaps = 22/463 (4%) Query: 283 QGVETEYSLAFILAVLI--SFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRAL 340 ++ I + ++Y+ + + + QA D LT LPN Sbjct: 341 HRDGRLIPVSMIGFPIEFGGQPQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLF 400 Query: 341 EQAP---------EQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENE 391 + + + ++ + ++ G + + R L+ ++ + Sbjct: 401 ADRLDRALTRARRRGDYQYAVLMIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMD 460 Query: 392 KLYQLPGSELLLVLSGPETEGRLQHMVNILNS---RQIHWNNTGLDMGYGAAWGRFDGNQ 448 + +L G E ++L +++ + +V+ + + + T + G + Sbjct: 461 TVARLGGDEFAVILEELKSKKEVMAVVDRIGAALGKPCMLCGTTVTPGASVGIVLRTRDY 520 Query: 449 ETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA 508 ++ + +L ++ + + + + + L +R ALD+G+LLL+ Sbjct: 521 QSPEDILRDADIAMYRAKESGRPSMI--FDRRMHQEILDAINLEADLRAALDRGELLLHY 578 Query: 509 QPIRN---KEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLAT 565 QPI + EG++ ++ D G++ P +F+PL + L V+ + L Sbjct: 579 QPIVDVQTGRIEGFEALVRWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRA 638 Query: 566 HPCDKKG---PRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAES 622 + SVN+ +++ + + + + + P + LEITE +A+ Sbjct: 639 WQLELPEAEQLSVSVNVSCHQFVKEGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQH 698 Query: 623 SMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS 682 + + +L G +IAIDDFGTGY++ L++L D +KID F+ N IV+S Sbjct: 699 TAGELSRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKS 758 Query: 683 ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQ 725 I LA++ L+V+AE VE Q Q L QG++ RP Sbjct: 759 IIALARSLGLTVIAEGVEHQDQLDKLRNADCDKAQGFMFSRPV 801 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.177 0.621 Lambda K H 0.267 0.0543 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,154,368,300 Number of Sequences: 3077464 Number of extensions: 341612291 Number of successful extensions: 1107469 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 22916 Number of HSP's successfully gapped in prelim test: 1726 Number of HSP's that attempted gapping in prelim test: 1006985 Number of HSP's gapped (non-prelim): 34258 length of query: 729 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 593 effective length of database: 621,861,252 effective search space: 368763722436 effective search space used: 368763722436 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.8 bits) S2: 98 (42.0 bits)