 |
| Job Description | P0ACJ5 | | Confidence | 85.48% | Date | Thu Jan 5 11:18:18 GMT 2012 |
| Rank | 367 | Aligned Residues | 36 |
| % Identity | 22% | Template | d1aisb2 |
| SCOP info | Cyclin-like
| Cyclin-like
| Transcription factor IIB (TFIIB), core domain
|
| Resolution | 2.10 |
|
|   |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | A | L | L | Q | Q | D | C | T | L | S | L | Q | A | L | A | E | A | V | N | L | T | T | T | P | C | W | K | R | L | K | R | L | E | D | D |
| Query Conservation |   |
|   |   |
|   |   |
|   |
|   |
|   |   |
|
|
|   |   |
|
|   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |   |
|
|   |   |   |
|
|   |
|   |   |   |
| Template Sequence |   |
I | A | S | L | L | E | G | E | K | R | T | Q | R | E | V | A | E | V | A | R | V | T | E | V | T | V | R | N | R | Y | K | E | L | V | E | K |
| Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1257 | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . | . | . | 1290 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|