Phyre 2 alignment of P0A6P7 with c2j0vD_

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Job Description | P0A6P7
Confidence | 99.62% | Date | Thu Jan 5 11:03:39 GMT 2012
Rank | 144 | Aligned Residues | 173
% Identity | 15% | Template | c2j0vD_
PDB info | PDB header:nucleotide-binding protein | Chain: D: PDB Molecule:rac-like gtp-binding protein arac7; | PDBTitle: the crystal structure of arabidopsis thaliana rac7-rop9:2 the first ras superfamily gtpase from the plant kingdom
Resolution | 1.78 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | H | L | P | S | D | T | G | I | E | V | A | F | A | G | R | S | N | A | G | K | S | S | A | L | N | T | L | T | N | Q | K | S | L | A | R | T | S | K | T | P | G | R | T | Q | L | I | N | L | F | E | V | A | D | G | K | R | L | V | D | L | P | G | Y | G | Y | A | E | V | P | E | E | M | K | R | K | W | Q | R | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | .
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | .
Template Sequence |  | S | H | M | S | V | S | K | F | I | K | C | V | T | V | G | D | G | A | V | G | K | T | C | M | L | I | C | Y | T | S | N | K | F | P | T | D | Y | I | P | T | V | F | D | N | F | S | A | N | V | A | V | D | G | Q | I | V | N | L | G | L | W | D | T | A | G | Q | E | D | Y | R | P | L | . | . | . | . | . | . | . | .
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | S | S |  |  |  |  |  |  |  |  |  |  | S |  |  |  | S | S |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | . | . | . | . | . | . | . | .
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | .
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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