BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (159 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A7FGJ2 Cytochrome c-type biogenesis protein ccmE n=135 ... 227 1e-58 UniRef50_Q1ZIX0 Cytochrome c-type biogenesis protein CcmE n=4 Ta... 177 1e-43 UniRef50_A3N216 Cytochrome c-type biogenesis protein ccmE n=93 T... 170 2e-41 UniRef50_A6V817 Cytochrome c-type biogenesis protein ccmE n=80 T... 141 5e-33 UniRef50_C6P0C2 CcmE/CycJ protein n=1 Tax=Sideroxydans lithotrop... 130 1e-29 UniRef50_C6N3B8 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 130 1e-29 UniRef50_A5WHG7 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 129 3e-29 UniRef50_Q21JJ9 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 128 7e-29 UniRef50_C7RAW0 CcmE/CycJ protein n=1 Tax=Kangiella koreensis DS... 126 2e-28 UniRef50_Q46RW7 Cytochrome c-type biogenesis protein ccmE n=10 T... 122 5e-27 UniRef50_A9W2K2 Cytochrome c-type biogenesis protein ccmE n=28 T... 119 2e-26 UniRef50_Q2RYF4 Cytochrome c-type biogenesis protein ccmE n=7 Ta... 114 7e-25 UniRef50_C5S795 CcmE/CycJ protein n=1 Tax=Allochromatium vinosum... 114 1e-24 UniRef50_D0J750 Cytochrome C-type biogenesis protein n=1 Tax=Com... 113 2e-24 UniRef50_A4YRM0 Cytochrome c-type biogenesis protein ccmE n=28 T... 113 2e-24 UniRef50_Q478K9 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 112 3e-24 UniRef50_B8H1L5 Cytochrome c-type biogenesis protein ccmE n=4 Ta... 110 1e-23 UniRef50_D0Y445 CcmE/CycJ protein n=1 Tax=Caulobacter segnis ATC... 110 1e-23 UniRef50_A6X2C8 Cytochrome c-type biogenesis protein ccmE n=37 T... 110 2e-23 UniRef50_B6IVR1 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 109 2e-23 UniRef50_Q69AY8 Cytochrome c-type biogenesis protein ccmE n=27 T... 108 4e-23 UniRef50_Q3BSK6 Cytochrome c-type biogenesis protein ccmE 2 n=19... 108 8e-23 UniRef50_A0LDE3 CcmE/CycJ protein n=1 Tax=Magnetococcus sp. MC-1... 107 1e-22 UniRef50_Q0AR54 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 106 2e-22 UniRef50_Q4FNY3 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 105 5e-22 UniRef50_A8PN63 CytoChrome c-type biogenesis protein CcmE (Cytoc... 105 5e-22 UniRef50_A5CWG8 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 104 1e-21 UniRef50_Q0A805 Cytochrome c-type biogenesis protein ccmE n=18 T... 103 1e-21 UniRef50_Q87BH5 Cytochrome c-type biogenesis protein ccmE n=7 Ta... 103 1e-21 UniRef50_B0SVC7 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 99 5e-20 UniRef50_Q5FHG0 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 96 3e-19 UniRef50_B4SPY3 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 96 5e-19 UniRef50_C0R3Z7 Cytochrome c-type biogenesis protein ccmE n=6 Ta... 94 1e-18 UniRef50_D0RQU2 CcmE/CycJ protein n=1 Tax=alpha proteobacterium ... 94 1e-18 UniRef50_Q2G8J0 Cytochrome c-type biogenesis protein ccmE n=7 Ta... 92 4e-18 UniRef50_A8GWM8 Cytochrome c-type biogenesis protein ccmE n=15 T... 91 8e-18 UniRef50_C6XIM0 CcmE/CycJ protein n=1 Tax=Hirschia baltica ATCC ... 91 1e-17 UniRef50_D2MJF2 CcmE/CycJ protein n=1 Tax=Candidatus Poribacteri... 90 2e-17 UniRef50_Q5LL36 Cytochrome c-type biogenesis protein ccmE 2 n=1 ... 90 2e-17 UniRef50_Q0C2L6 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 90 3e-17 UniRef50_A9IR17 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 88 1e-16 UniRef50_Q2GKI0 Cytochrome c-type biogenesis protein ccmE n=6 Ta... 86 5e-16 UniRef50_C8N960 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 85 6e-16 UniRef50_A8LMF5 Cytochrome c-type biogenesis protein ccmE n=36 T... 85 8e-16 UniRef50_Q5NN30 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 85 8e-16 UniRef50_B5J4A6 Cytochrome c-type biogenesis protein CcmE n=4 Ta... 82 6e-15 UniRef50_C1D1H5 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 81 1e-14 UniRef50_Q96326 G1p n=8 Tax=Magnoliophyta RepID=Q96326_ARATH 80 1e-14 UniRef50_A1SI32 CcmE/CycJ protein n=1 Tax=Nocardioides sp. JS614... 80 1e-14 UniRef50_B9GW99 Predicted protein (Fragment) n=2 Tax=Embryophyta... 79 4e-14 UniRef50_Q1IYZ2 CcmE/CycJ protein n=1 Tax=Deinococcus geothermal... 78 1e-13 UniRef50_Q5SIG4 Cytochrome c-type biogenesis protein ccmE n=4 Ta... 77 2e-13 UniRef50_Q2GCU8 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 75 7e-13 UniRef50_A3VRG5 Cytochrome c-type biogenesis transmembrane prote... 74 1e-12 UniRef50_D2VQC0 Predicted protein n=1 Tax=Naegleria gruberi RepI... 70 2e-11 UniRef50_B3CU35 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 70 2e-11 UniRef50_D1H5F6 Whole genome shotgun sequence of line PN40024, s... 69 6e-11 UniRef50_D1CC97 CcmE/CycJ protein n=1 Tax=Thermobaculum terrenum... 65 6e-10 UniRef50_C1XMN8 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 63 4e-09 UniRef50_C1A6K1 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 62 5e-09 UniRef50_D1C3N4 CcmE/CycJ protein n=1 Tax=Sphaerobacter thermoph... 61 1e-08 UniRef50_B9L1G4 Cytochrome c-type biogenesis protein CycJ n=1 Ta... 59 6e-08 UniRef50_Q9RXG6 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 55 1e-06 UniRef50_UPI0001C321C1 Cytochrome c-type biogenesis protein CcmE... 53 3e-06 UniRef50_Q28QS7 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 51 1e-05 UniRef50_B8D1Q8 Putative cytochrome c-type biogenesis protein Cc... 49 4e-05 UniRef50_Q1D7C0 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 48 9e-05 UniRef50_C7LS40 Cytochrome c-type biogenesis protein CcmE n=3 Ta... 48 9e-05 UniRef50_C1SLI4 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 48 9e-05 UniRef50_C7M2R0 CcmE/CycJ protein n=1 Tax=Acidimicrobium ferroox... 48 1e-04 UniRef50_Q01YS2 Cytochrome c-type biogenesis protein, CcmE-like ... 45 6e-04 UniRef50_Q1IP94 Cytochrome c-type biogenesis protein, CcmE-like ... 45 8e-04 UniRef50_A9GE04 Putative membrane protein n=1 Tax=Sorangium cell... 45 0.001 UniRef50_B8DNC7 Cytochrome c-type biogenesis protein CcmE n=10 T... 44 0.002 UniRef50_Q648Q0 Putative uncharacterized protein n=1 Tax=uncultu... 42 0.005 UniRef50_C1F370 Putative cytochrome c-type biogenesis protein n=... 42 0.007 UniRef50_A0CI93 Chromosome undetermined scaffold_19, whole genom... 41 0.013 UniRef50_UPI00006CB2D3 hypothetical protein TTHERM_00455200 n=1 ... 40 0.023 UniRef50_Q12WM0 Cytochrome c-type biogenesis protein n=1 Tax=Met... 39 0.074 >UniRef50_A7FGJ2 Cytochrome c-type biogenesis protein ccmE n=135 Tax=Gammaproteobacteria RepID=CCME_YERP3 Length = 164 Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/155 (68%), Positives = 127/155 (81%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RRK+RL++A VL G++LT LVLYALRSNIDLFYTPGEIL GK E + P +GQRL Sbjct: 1 MNPRRKSRLYLAMVVLIGISLTTTLVLYALRSNIDLFYTPGEILQGKGERHEKPAIGQRL 60 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMVMPGSVQRD +L+++F +YDA G+V V+Y GILPDLFREGQGVV QG +GN Sbjct: 61 RIGGMVMPGSVQRDAKTLEMSFQVYDARGAVTVTYTGILPDLFREGQGVVAQGVFAEGNT 120 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYK 155 + AKEVLAKHDE YTPPEVE+AM+ NH RPA+ Y+ Sbjct: 121 VHAKEVLAKHDEKYTPPEVEEAMKENHSRPAAAYR 155 >UniRef50_Q1ZIX0 Cytochrome c-type biogenesis protein CcmE n=4 Tax=Gammaproteobacteria RepID=Q1ZIX0_9GAMM Length = 158 Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 87/146 (59%), Positives = 111/146 (76%), Gaps = 1/146 (0%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RRK RL I A++ GL+L++GLVL+AL+ NIDLFYTP EI+ GK ET + P++GQRL Sbjct: 1 MNPRRKKRLIITSALVIGLSLSVGLVLFALQQNIDLFYTPTEIVKGKNETGEKPQIGQRL 60 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGS-VDVSYEGILPDLFREGQGVVVQGELEKGN 119 R+GGMV+ GSV+RD SLKV+F + D G V + ++GILPDLFREGQG+V QG L Sbjct: 61 RIGGMVVNGSVKRDQTSLKVSFDLIDDGGERVTIFFDGILPDLFREGQGIVAQGVLLNAT 120 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEA 145 I A EVLAKHDE Y PPEV++A++ Sbjct: 121 QINAFEVLAKHDEEYMPPEVQEAIKG 146 >UniRef50_A3N216 Cytochrome c-type biogenesis protein ccmE n=93 Tax=Proteobacteria RepID=CCME_ACTP2 Length = 181 Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 85/148 (57%), Positives = 106/148 (71%), Gaps = 1/148 (0%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRET-QQMPEVGQR 59 MN RRK+RL + +++ G+A+ GL+LYAL NIDLFYTP EI+ GK + Q PEVGQR Sbjct: 1 MNPRRKSRLKVVVSIIFGVAVAAGLMLYALSQNIDLFYTPSEIVNGKNDDPDQKPEVGQR 60 Query: 60 LRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 +RVGGMV+ GSV+RD +LKV F D S+ V YEGILPDLFREGQG+V QG L + Sbjct: 61 IRVGGMVVEGSVKRDDKTLKVEFEANDIGPSITVEYEGILPDLFREGQGIVAQGVLIEPT 120 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANH 147 + A EVLAKHDENY PPE+ ++ H Sbjct: 121 RLKATEVLAKHDENYMPPELGDKLKEQH 148 >UniRef50_A6V817 Cytochrome c-type biogenesis protein ccmE n=80 Tax=Bacteria RepID=CCME_PSEA7 Length = 162 Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 73/144 (50%), Positives = 93/144 (64%), Gaps = 6/144 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RK RL I A+L G+ +GL L AL+ NI+LFYTP +I G+ T R+ Sbjct: 1 MNPVRKKRLIIVLAILVGVGAAVGLALSALQQNINLFYTPTQIANGEAPTDT------RI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R GG+V GS+QR +SL V F + D V ++Y GILPDLFREGQG+V G+L Sbjct: 55 RAGGLVEKGSLQRSADSLNVRFVVTDGAKEVTIAYHGILPDLFREGQGIVALGKLGGDGV 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAME 144 ++A EVLAKHDENY PPEV KA++ Sbjct: 115 LVADEVLAKHDENYMPPEVTKALK 138 >UniRef50_C6P0C2 CcmE/CycJ protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0C2_9PROT Length = 164 Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 90/134 (67%), Gaps = 6/134 (4%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 RK RLW L + +GLVL+AL++N+ L++TP ++ Y K Q + R+GG Sbjct: 4 RKKRLWFIVGGLVLVGAAVGLVLFALKNNVSLYFTPTQV-YNKEAPQN-----RSFRIGG 57 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 +V GS++R+ + L V F I D ++ V Y+GILPDLF+EG+GVV QG+LE+GN A+ Sbjct: 58 LVESGSLKRENDGLTVHFNITDTFKTMAVVYKGILPDLFKEGKGVVAQGKLEEGNVFHAE 117 Query: 125 EVLAKHDENYTPPE 138 EVLAKHDENY PPE Sbjct: 118 EVLAKHDENYMPPE 131 >UniRef50_C6N3B8 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Legionella RepID=C6N3B8_9GAMM Length = 164 Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/143 (48%), Positives = 86/143 (60%), Gaps = 6/143 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RK ++ I + LA L++ GLVLYALR NI LFYTP ++ G+ Q + Sbjct: 22 MNPARKRKILILLSALAVLSIAAGLVLYALRQNISLFYTPTQVAEGQAPLQHA------I 75 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV GS R L V F + D +V V + GILPDLFREGQGVVV+G L Sbjct: 76 RIGGMVEKGSFIRASKGLDVEFKVTDFTKTVTVLHTGILPDLFREGQGVVVEGRLLDNQR 135 Query: 121 ILAKEVLAKHDENYTPPEVEKAM 143 A VLAKHD NY PPEV+ A+ Sbjct: 136 FQATRVLAKHDANYMPPEVKAAL 158 >UniRef50_A5WHG7 Cytochrome c-type biogenesis protein ccmE n=5 Tax=Gammaproteobacteria RepID=CCME_PSYWF Length = 175 Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 72/149 (48%), Positives = 95/149 (63%), Gaps = 10/149 (6%) Query: 1 MN-IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQR 59 MN +RRK +W+A A LAG + + LV+YA+ D ++ P I G P+ +R Sbjct: 1 MNAVRRKKLIWVA-ATLAGAIIAVLLVIYAIGQQTDYYFDPTAIAAG-----DAPQ-NKR 53 Query: 60 LRVGGMVMPGSVQRDPN-SLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKG 118 +R GGMV+ SV+RDPN LKV F I D +V VSY+GILPDLF E GVV GE++ G Sbjct: 54 IRAGGMVVKDSVRRDPNDDLKVQFEITDFNATVPVSYQGILPDLFAENSGVVATGEMQ-G 112 Query: 119 NHILAKEVLAKHDENYTPPEVEKAMEANH 147 +A EVLAKHDENY PPEV +++ +H Sbjct: 113 KVFVASEVLAKHDENYMPPEVAASLKEDH 141 >UniRef50_Q21JJ9 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Gammaproteobacteria RepID=CCME_SACD2 Length = 157 Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 68/144 (47%), Positives = 94/144 (65%), Gaps = 6/144 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ RK RL ++ ++ +GL+++AL N++LFY P +I+ G + P G + Sbjct: 1 MHPVRKQRLMTVLFIVIASSVAVGLMVFALSKNLNLFYPPSQIVSG-----EAPR-GPTI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R GG V+PGSV+R +SLKV F+I D + SV V YEG+LPDLF EG+ VV G++ + Sbjct: 55 RGGGCVVPGSVERASDSLKVAFSITDGKESVLVRYEGLLPDLFDEGEAAVVTGKVTQEGV 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAME 144 A EVLAKHDE YTPPEVE AM+ Sbjct: 115 FEAVEVLAKHDETYTPPEVENAMK 138 >UniRef50_C7RAW0 CcmE/CycJ protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAW0_KANKD Length = 163 Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/147 (42%), Positives = 96/147 (65%), Gaps = 12/147 (8%) Query: 1 MNIRRKNRLWIACAVLAGLAL---TIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVG 57 M + R+N+L A+++GL L + L+LYAL NI+ FY P E+ G + Sbjct: 1 MKVHRRNKL---IAIISGLVLLSGAVALILYALTENINHFYAPTEVKEGN------APLN 51 Query: 58 QRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEK 117 + +RVGG+V+PGS++R L V F I D + + +SY+ ILPD+F+EGQGV+ +G+L + Sbjct: 52 KTIRVGGLVVPGSIERSGERLYVEFKITDNQSQMVISYDNILPDMFKEGQGVIAEGQLVE 111 Query: 118 GNHILAKEVLAKHDENYTPPEVEKAME 144 N ++A +VLAKHDE Y PPEVE +++ Sbjct: 112 KNKLVASKVLAKHDETYMPPEVEASLQ 138 >UniRef50_Q46RW7 Cytochrome c-type biogenesis protein ccmE n=10 Tax=Proteobacteria RepID=CCME_RALEJ Length = 159 Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 9/151 (5%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R+ RL + A LA + + LVL A RSN+ F++P ++ + P + R+GG Sbjct: 4 RQRRLGMLLAALACAGIALALVLNAFRSNLVFFFSPSQV-----AAHEAP-ASRSFRLGG 57 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 +V PGS++R+ + + V F + D V V Y G+LPDLFREG+GVV +G L++ +A Sbjct: 58 LVAPGSIRREGDGMTVRFIVTDKAREVPVVYRGLLPDLFREGKGVVARGTLDRSGTFVAS 117 Query: 125 EVLAKHDENYTPPEVEKAM---EANHRRPAS 152 EVLAKHDENY PPE A+ E +RR AS Sbjct: 118 EVLAKHDENYMPPEAADALKQAEQVNRRMAS 148 >UniRef50_A9W2K2 Cytochrome c-type biogenesis protein ccmE n=28 Tax=Proteobacteria RepID=CCME_METEP Length = 177 Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/145 (45%), Positives = 87/145 (60%), Gaps = 7/145 (4%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+ RL + A A LAL +GL+L A+ +I F +P E+ Q +P G R R+G Sbjct: 3 RKSRRLILIAACGAVLALALGLILSAMSGSIVFFRSPAEV-----AAQGVPP-GTRFRLG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSV+R P+ V F + D +V V Y G+LPDLFREGQG+V +G L+ G A Sbjct: 57 GLVKDGSVKRGPDQ-NVEFAVTDTNATVPVQYRGLLPDLFREGQGIVAEGTLDVGGVFRA 115 Query: 124 KEVLAKHDENYTPPEVEKAMEANHR 148 VLAKHDENY P EV A++A R Sbjct: 116 DTVLAKHDENYMPREVADALKAQGR 140 >UniRef50_Q2RYF4 Cytochrome c-type biogenesis protein ccmE n=7 Tax=Bacteria RepID=CCME_RHORT Length = 153 Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 88/145 (60%), Gaps = 8/145 (5%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+K RL+ + L GL L A + N+ FY+P ++ ++ + G+R RVG Sbjct: 3 RKKRRLYFVVLGMLALFAAAGLTLTAFQDNLVFFYSPTDL------QEKGVDQGRRFRVG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSV RD +++ F + D +V V Y G+LPDLFREGQGVV +G ++ +A Sbjct: 57 GLVEEGSVVRDGETVR--FIVTDLMNTVTVRYTGMLPDLFREGQGVVAEGAMDGAGTFVA 114 Query: 124 KEVLAKHDENYTPPEVEKAMEANHR 148 VLAKHDENY PPEV ++++A+ + Sbjct: 115 ASVLAKHDENYMPPEVAESLKASGK 139 >UniRef50_C5S795 CcmE/CycJ protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S795_CHRVI Length = 160 Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 7/147 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R+K +++ A+L G+ L + AL+SN+ F++P +++ ++ P Sbjct: 1 MKARQKRLVFVGLAIL-GIGAASTLAITALKSNLSYFFSPSQVI-----AKEAP-ADHVF 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GS+QR L V F + D +V V+YEGILPDLF+EG GVV +G L Sbjct: 54 RLGGLVTEGSLQRQGEGLTVYFDVTDNASTVKVAYEGILPDLFKEGSGVVAKGRLRPDGV 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANH 147 A+EVLAKHDE Y PPEV ++ H Sbjct: 114 FQAEEVLAKHDEEYMPPEVASTLQTAH 140 >UniRef50_D0J750 Cytochrome C-type biogenesis protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J750_COMTE Length = 170 Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 7/159 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R++ LW+ + A LVL AL SN+ FY+P ++ G ++P G Sbjct: 1 MKPRQRRLLWVLAGLALVAAAVT-LVLRALNSNVMFFYSPSQVHAG-----EVPH-GAAF 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V PGS+QR + + + F + D SV V Y G+LPDLFREG+GVVV G ++ Sbjct: 54 RLGGLVEPGSLQRSGDGMLLRFAVTDEVRSVPVQYRGLLPDLFREGKGVVVSGRMQADGA 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS 159 A EVLAKHDENY PPE A++ +P D A+ Sbjct: 114 FQASEVLAKHDENYMPPEAAHALKNAAGKPPEKSADDAT 152 >UniRef50_A4YRM0 Cytochrome c-type biogenesis protein ccmE n=28 Tax=Alphaproteobacteria RepID=CCME_BRASO Length = 171 Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/141 (46%), Positives = 84/141 (59%), Gaps = 7/141 (4%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R++ RL I L LA+ GLVL ALR +I F TP + E P G+R R+G Sbjct: 3 RKQRRLTIIGGALFVLAVAAGLVLNALRDSIVFFSTPTMVA----EKHVAP--GKRFRLG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V PGS++R + L VTF + D + V+Y+GILPDLFREGQGVV +G L+ A Sbjct: 57 GLVQPGSLKRG-DDLAVTFEVADGGAKLPVAYKGILPDLFREGQGVVAEGALDASGVFKA 115 Query: 124 KEVLAKHDENYTPPEVEKAME 144 VLAKHDE Y P EV ++ Sbjct: 116 DTVLAKHDETYMPKEVADTLK 136 >UniRef50_Q478K9 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Betaproteobacteria RepID=CCME_DECAR Length = 153 Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 80/134 (59%), Gaps = 6/134 (4%) Query: 26 VLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIY 85 VL AL SNI L+ +P ++ GK P+ G+ R+GG+V GS+QR + + + F + Sbjct: 25 VLNALNSNIALYISPTDVAEGK-----APQ-GKAFRIGGLVKEGSLQRQADGVTIAFVVT 78 Query: 86 DAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEA 145 D + V Y+GILPDLF+EG+GVV QG++ A EVLAKHDENY PPE KA+ Sbjct: 79 DTAKDMTVHYKGILPDLFKEGKGVVAQGKMAADGTFTASEVLAKHDENYMPPEAAKAVGD 138 Query: 146 NHRRPASVYKDPAS 159 + A K AS Sbjct: 139 AQAKSAGAEKPKAS 152 >UniRef50_B8H1L5 Cytochrome c-type biogenesis protein ccmE n=4 Tax=Caulobacteraceae RepID=CCME_CAUCN Length = 162 Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/141 (43%), Positives = 82/141 (58%), Gaps = 7/141 (4%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 + + RL I A+ LAL +GL LY LR +I LFYTP + K G+++++G Sbjct: 9 KARRRLTILLAIAPVLALAVGLALYGLRDSISLFYTPAQAQEAKVSA------GRKVQLG 62 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSV + P+ V F I D + + V Y G LPDLFREGQG+V +G A Sbjct: 63 GLVQHGSVVKYPDG-NVEFVIADQKATAKVVYHGDLPDLFREGQGIVAEGSFNPAGVFEA 121 Query: 124 KEVLAKHDENYTPPEVEKAME 144 K VLAKHDE Y P EV KA++ Sbjct: 122 KLVLAKHDERYMPREVSKALK 142 >UniRef50_D0Y445 CcmE/CycJ protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y445_9CAUL Length = 202 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 7/141 (4%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 + + RL I AV LAL +GL LY +R +I LFYTP + +E P G+++++G Sbjct: 14 KARRRLTILLAVAPVLALAVGLALYGMRDSISLFYTPAQA----QEAHVKP--GRKVQLG 67 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSV + + V F + D + + + Y G LPDLFREGQG+V +G + +A Sbjct: 68 GLVQHGSVVKHADG-NVEFVVADQKATAKIVYHGDLPDLFREGQGIVAEGTFNEQGVFVA 126 Query: 124 KEVLAKHDENYTPPEVEKAME 144 K+VLAKHDE Y P EV KA++ Sbjct: 127 KQVLAKHDERYMPREVSKALK 147 >UniRef50_A6X2C8 Cytochrome c-type biogenesis protein ccmE n=37 Tax=Brucellaceae RepID=CCME_OCHA4 Length = 165 Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/141 (41%), Positives = 84/141 (59%), Gaps = 8/141 (5%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R++ RL++ LA LA+ +GL+L A +I F TP ++ T+Q G R R+G Sbjct: 25 RKRKRLFLIGGALAVLAVAVGLMLMAFSQDIRFFRTPADL------TEQDMASGSRFRLG 78 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSV R+ + L+ FT+ D +V V +EGI PDLFREGQGVV +G A Sbjct: 79 GLVEEGSVSREGSELR--FTVTDTIKTVKVVFEGIPPDLFREGQGVVAEGRFGDDGVFRA 136 Query: 124 KEVLAKHDENYTPPEVEKAME 144 VLAKHDENY P ++ +++ Sbjct: 137 DNVLAKHDENYVPKDLADSLK 157 >UniRef50_B6IVR1 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Rhodospirillum centenum SW RepID=CCME_RHOCS Length = 168 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 7/141 (4%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+K RL++ L GL L L A NI FY+P +++ P + +R+G Sbjct: 3 RKKRRLYMLGLALLGLGTATALTLSAFEENIVFFYSPSDLVV-------QPPGDRSVRLG 55 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSVQ+ + L +TF + D +V V+Y+GI+PDLFREGQGVV +G + +A Sbjct: 56 GLVEDGSVQKQADGLTITFRVTDTANTVPVTYKGIVPDLFREGQGVVAEGRMGGDGVFVA 115 Query: 124 KEVLAKHDENYTPPEVEKAME 144 +EVLA+HDENY PPEV A++ Sbjct: 116 REVLARHDENYMPPEVHDALQ 136 >UniRef50_Q69AY8 Cytochrome c-type biogenesis protein ccmE n=27 Tax=cellular organisms RepID=CCME_GLUDA Length = 173 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 77/143 (53%), Gaps = 8/143 (5%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+ RLW+ A L GL LVL A SNI F P ++ P + +R+G Sbjct: 3 RKSRRLWLVGACLLGLGTATALVLNAFSSNIVFFMAPSQV------RAHPPAADRTIRLG 56 Query: 64 GMVMPGSVQRDP--NSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 GMV+ GSV+R ++ F + D + +V V Y GILPDLFREGQ VV G + Sbjct: 57 GMVVAGSVRRQTQGDTPIALFDVTDGQAAVTVRYAGILPDLFREGQSVVAVGTVAPDGAF 116 Query: 122 LAKEVLAKHDENYTPPEVEKAME 144 A EVLAKHDE Y P EV +A+ Sbjct: 117 RASEVLAKHDETYMPKEVAEALR 139 >UniRef50_Q3BSK6 Cytochrome c-type biogenesis protein ccmE 2 n=19 Tax=Xanthomonas RepID=CCME2_XANC5 Length = 156 Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 86/149 (57%), Gaps = 7/149 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN +R+ RLW+ A++ L LV AL+ N+ YTP E+L G R Sbjct: 1 MNPQRRRRLWLVLALVLAGGLATTLVAMALQRNVAYLYTPSEVLRGDAGAHS------RF 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV GS +R +L+ F + D + + VSY+ ILPDLFREGQ VV G ++ G Sbjct: 55 RLGGMVEKGSFKRASGALEAQFRVTDGDAQLPVSYDRILPDLFREGQAVVATGRMQNGI- 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRR 149 +A++VLAKHDE Y P EV M + HR+ Sbjct: 114 FVAEDVLAKHDETYMPKEVADKMGSAHRK 142 >UniRef50_A0LDE3 CcmE/CycJ protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDE3_MAGSM Length = 156 Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/154 (40%), Positives = 88/154 (57%), Gaps = 8/154 (5%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 +R K L IA VL G AL + LV + + F+TP E++ E VG+++R+ Sbjct: 9 MRNKRLLLIATLVLVGGAL-LTLVFQSFSGAMVYFHTPTEVMQKTVEL-----VGKKVRI 62 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GGMV GS+ R +L++TF + D E + V Y+G+ PDLFREGQGVVV+GE + Sbjct: 63 GGMVQAGSLSRKEGTLEITFDVTDGETPISVYYKGVTPDLFREGQGVVVEGEWLNTKPFI 122 Query: 123 AKEVLAKHDENYTPPEVEKAMEANHRRPASVYKD 156 A +LAKH E+Y P VE EA + ++ K Sbjct: 123 AHTILAKHSEDYMP--VEMNAEAIQKSRENILKS 154 >UniRef50_Q0AR54 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Hyphomonadaceae RepID=CCME_MARMM Length = 158 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/155 (42%), Positives = 85/155 (54%), Gaps = 12/155 (7%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R RL A L + +GL L ALRS + FY+P EI + P + R+ Sbjct: 1 MMRHRNRRLATIAASAIVLVVAVGLGLMALRSAVVFFYSPSEI------AAEHPGIEARI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGG+V+ SV + S F I D +V V Y G+LPDLFREGQGVVV+G Sbjct: 55 RVGGLVLEESVG-EAASGATRFVITDRVENVQVEYAGLLPDLFREGQGVVVEGRFAADGV 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYK 155 + A+ VLAKHDE Y PPEV +A+ R A V++ Sbjct: 114 LQARTVLAKHDETYMPPEVAEAL-----REAGVWQ 143 >UniRef50_Q4FNY3 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Candidatus Pelagibacter RepID=CCME_PELUB Length = 139 Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 56/141 (39%), Positives = 87/141 (61%), Gaps = 10/141 (7%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQR-LRV 62 + K R +LA + LT+ LVL +L+ N+ F +P EI + + E+ ++ +RV Sbjct: 5 KVKLRFIFLALILASVILTVFLVLQSLKENVVYFQSPSEI-------KSLIELNKKKIRV 57 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GGMV S+ D + KV F I D + +++ Y G +P+LF EG+GVV +G L+ N+ Sbjct: 58 GGMVKEQSIFIDSD--KVNFVITDFKNEINIVYTGAVPNLFAEGKGVVAEGFLKDKNYFT 115 Query: 123 AKEVLAKHDENYTPPEVEKAM 143 A ++LAKHDENY PPEV++A+ Sbjct: 116 ATKILAKHDENYMPPEVKEAL 136 >UniRef50_A8PN63 CytoChrome c-type biogenesis protein CcmE (Cytochrome c maturationprotein E) (Heme chaperone ccmE) n=1 Tax=Rickettsiella grylli RepID=A8PN63_9COXI Length = 132 Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 6/134 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN +K RL ++ + IGL +YAL+ NI+LFYTP +++ RE GQ Sbjct: 1 MNGLQKKRLNFVVFLIVISLVVIGLSVYALKQNINLFYTPSQLV---REHLAQ---GQLF 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 +GG V G+V++ ++F + DA V V Y+G+LPDLFREGQ VV++G L+K Sbjct: 55 HLGGQVKKGTVKQHGEPGLISFVVSDASHQVLVEYQGVLPDLFREGQSVVIKGSLDKNGI 114 Query: 121 ILAKEVLAKHDENY 134 + AK+VLAKHDE Y Sbjct: 115 LQAKQVLAKHDERY 128 >UniRef50_A5CWG8 Cytochrome c-type biogenesis protein ccmE n=5 Tax=Gammaproteobacteria RepID=CCME_VESOH Length = 140 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/141 (39%), Positives = 83/141 (58%), Gaps = 9/141 (6%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 +R+NR+ + ++ G++L L L A N+ F +P ++ G+ + R+G Sbjct: 3 KRQNRMVLVALLVIGVSLAGYLGLKAFNENLLYFLSPTDVTKGRAPKDK------DFRLG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 GM++ S++ D +KV F + D + V+Y GILPDLF+EGQGV+ G L G +A Sbjct: 57 GMIVKDSIKHD--GIKVVFDVTDYSNTFRVNYSGILPDLFKEGQGVITTGSLVDG-VFMA 113 Query: 124 KEVLAKHDENYTPPEVEKAME 144 EVLAKHDENY PPEV A+E Sbjct: 114 TEVLAKHDENYMPPEVADALE 134 >UniRef50_Q0A805 Cytochrome c-type biogenesis protein ccmE n=18 Tax=Proteobacteria RepID=CCME_ALHEH Length = 158 Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/116 (43%), Positives = 75/116 (64%), Gaps = 6/116 (5%) Query: 29 ALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAE 88 A + N+ F+TP E++ ++ P + + +R+GG+V GSV+R+ S +V F + D Sbjct: 28 AFQDNLVFFFTPSEVM-----AREAP-IDRPIRIGGLVKAGSVEREAASARVHFKVTDTA 81 Query: 89 GSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAME 144 S+ VSY+GILPDLFREGQGVV QG L A +VLA+HDE Y P E ++A++ Sbjct: 82 ESITVSYDGILPDLFREGQGVVAQGRLGADGRFHATQVLARHDETYMPAEAKEALD 137 >UniRef50_Q87BH5 Cytochrome c-type biogenesis protein ccmE n=7 Tax=Xylella fastidiosa RepID=CCME_XYLFT Length = 153 Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 76/144 (52%), Gaps = 9/144 (6%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RR RLW ++ + L + ALR N+ Y P E+L G Q Sbjct: 1 MNARR--RLWSVLMLILAVGTAATLTIMALRHNLTYLYMPSEVLRGDTAQQT------HF 52 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GS QR +L F + D + V Y ILPDLFREGQ +V G+++ G Sbjct: 53 RLGGIVEKGSFQRTSGTLNTRFIVTDGNARLQVRYARILPDLFREGQAIVATGQMQHGTF 112 Query: 121 ILAKEVLAKHDENYTPPEVEKAME 144 I A+ +LA+H+E YTP ++ M+ Sbjct: 113 I-AENILARHNETYTPRQLANKMQ 135 >UniRef50_B0SVC7 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Caulobacteraceae RepID=CCME_CAUSK Length = 166 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 7/141 (4%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 + + RL I +AL +GL L+ +R I LFYTP + +P G+++++G Sbjct: 9 KARRRLTILAVAAPVVALAVGLALWGMRDAISLFYTPAQA-----AAAHVP-AGRKVQLG 62 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSV + P+ L V F + D + V Y+G LPDLFREGQG+V G ++ +A Sbjct: 63 GLVKAGSVVKHPDGL-VEFVVADQRSTALVHYKGDLPDLFREGQGIVASGAFDESGTFVA 121 Query: 124 KEVLAKHDENYTPPEVEKAME 144 +VLAKHDE Y P EV KA++ Sbjct: 122 NQVLAKHDERYMPREVAKALK 142 >UniRef50_Q5FHG0 Cytochrome c-type biogenesis protein ccmE n=5 Tax=canis group RepID=CCME_EHRRG Length = 134 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 9/133 (6%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+ RL++ L+ A ++ VL L++N+ FYTP E+L P + R+G Sbjct: 3 RKYRRLFVVIITLSIFAGSVVFVLGKLKNNVSFFYTPTELL--SSSLINRPNI----RIG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 GMV+ G+VQ+ +S + F I D + + V Y+GILP LF EG +V +G++ G I A Sbjct: 57 GMVVKGTVQKYDDS--IVFHITDLKNYIKVVYKGILPPLFSEGSWIVAKGKMVNGKFI-A 113 Query: 124 KEVLAKHDENYTP 136 E+LAKHDENY P Sbjct: 114 SEILAKHDENYMP 126 >UniRef50_B4SPY3 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Stenotrophomonas maltophilia RepID=CCME_STRM5 Length = 153 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/124 (43%), Positives = 67/124 (54%), Gaps = 7/124 (5%) Query: 26 VLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIY 85 V AL NI YTP E+L G + Q R R+GGMV+ GS R SL+ F + Sbjct: 26 VAMALERNIAYLYTPSEVLRGDVDAQS------RFRLGGMVVKGSFNRPVGSLEARFEVT 79 Query: 86 DAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEA 145 D + + V+ ILPD+F EG VV G L+ G + A EVLAKHDE Y P EV M Sbjct: 80 DGDAQLAVTTSRILPDMFAEGTAVVASGRLQDGIFV-ADEVLAKHDEKYVPKEVADKMGD 138 Query: 146 NHRR 149 HR+ Sbjct: 139 AHRK 142 >UniRef50_C0R3Z7 Cytochrome c-type biogenesis protein ccmE n=6 Tax=Wolbachia RepID=CCME_WOLWR Length = 133 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 74/133 (55%), Gaps = 9/133 (6%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 ++ RL I + L+ + +L L+ NI FYT E + + +Q++ +RVG Sbjct: 3 KKHKRLLITSGIFCFLSCIVFFILTTLKENISFFYTVSEAIV-LQNSQKL------IRVG 55 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 GMV+ SV R + +V F + D SV V Y+GILP +F E GVVVQG++ + LA Sbjct: 56 GMVVENSVIRSES--EVIFQMTDFNKSVVVKYQGILPPMFSEKSGVVVQGKMFDNSTFLA 113 Query: 124 KEVLAKHDENYTP 136 V AKHDENY P Sbjct: 114 DTVFAKHDENYMP 126 >UniRef50_D0RQU2 CcmE/CycJ protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQU2_9RICK Length = 147 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 12/146 (8%) Query: 1 MNIRRKNRL-WIACAVLAGLALTIGLVLY-ALRSNIDLFYTPGEILYGKRETQQMPEVGQ 58 MN + K RL + +V+A + IG +Y +L N F++P E+ + ++P Sbjct: 1 MNNKTKQRLSFFLVSVIA--FIIIGKFIYESLSKNTVYFFSPSELYI----STELPN--G 52 Query: 59 RLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKG 118 +R+GGMV GS+ + N + +F I D + + V+Y GI P+LF EGQG VV+G+L Sbjct: 53 LIRIGGMVKKGSLIKAGN--RYSFIITDFKNDISVNYIGIKPNLFEEGQGAVVEGKLSTR 110 Query: 119 NHILAKEVLAKHDENYTPPEVEKAME 144 N ++A ++LAKHDENY P EV A++ Sbjct: 111 NSLMASKILAKHDENYMPKEVADALK 136 >UniRef50_Q2G8J0 Cytochrome c-type biogenesis protein ccmE n=7 Tax=Sphingomonadales RepID=CCME_NOVAD Length = 156 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 71/128 (55%), Gaps = 10/128 (7%) Query: 9 LWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMP 68 L IA L G L L YAL + FY P +++ + PE G+ +R+GGMV Sbjct: 20 LVIALVALIGAGL---LAAYALSNQASYFYVPNDLV------KNPPEQGRAIRLGGMVQK 70 Query: 69 GSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLA 128 GS++ + + + F + D + V V Y GI PDLF EG GVV +G +E G +A +LA Sbjct: 71 GSLKTRADGITIDFVVGDGKARVPVRYTGITPDLFVEGSGVVAEGRME-GQTFVADNLLA 129 Query: 129 KHDENYTP 136 KHDENY P Sbjct: 130 KHDENYVP 137 >UniRef50_A8GWM8 Cytochrome c-type biogenesis protein ccmE n=15 Tax=Rickettsia RepID=CCME_RICB8 Length = 137 Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 10/132 (7%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 KNRL + + ++LY L +I F P +I E +Q G+ LRVGG+ Sbjct: 6 KNRLITIIICFCSAVIGVSIILYNLEKSIVFFVPPSKI----NEVEQ----GKELRVGGL 57 Query: 66 VMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKE 125 V S+ + K++F I D +++ Y+G+LP LFRE QG++ G L G I A+E Sbjct: 58 VKVDSINKIAAD-KISFVITDNIKDLEIFYQGVLPALFRENQGIIAIGRLSNGKFI-ARE 115 Query: 126 VLAKHDENYTPP 137 +LAKHDENY PP Sbjct: 116 LLAKHDENYRPP 127 >UniRef50_C6XIM0 CcmE/CycJ protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIM0_HIRBI Length = 155 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 6/134 (4%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R R W+ L + LV+ AL N TP EI+ G T VG+R+R+GG Sbjct: 4 RSQRAWLIGVAGVLLVGAVALVMSALGDNASYSRTPTEIVTGNVVT-----VGERVRIGG 58 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 +V S++R P +L + F I D E V+V+Y+ + PDLF EGQG+V +G ++ + A Sbjct: 59 LVGVDSIERGPGTL-IKFEITDGEYGVNVAYDDLPPDLFEEGQGIVAEGIIQVDGSLQAT 117 Query: 125 EVLAKHDENYTPPE 138 ++A+HDE+Y P E Sbjct: 118 RLVARHDESYMPKE 131 >UniRef50_D2MJF2 CcmE/CycJ protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJF2_9BACT Length = 151 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 6/138 (4%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 +K I +L G AL L L N+ F+TP E+ + Q +++RVGG Sbjct: 5 KKKVGMIISILLVGGALAY-LALGNFGENVVYFFTPSEVKAFSTDYYQ-----KKVRVGG 58 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 MV+ GS++ P+ L +TF + D E ++ V++EGI PDLF+EGQG VV+G + + Sbjct: 59 MVVEGSMETYPDRLGLTFQLTDGEATIPVTFEGIPPDLFKEGQGAVVEGYWTGEHRFESN 118 Query: 125 EVLAKHDENYTPPEVEKA 142 ++AKH E+Y P E+++A Sbjct: 119 LIMAKHSEDYMPIELKRA 136 >UniRef50_Q5LL36 Cytochrome c-type biogenesis protein ccmE 2 n=1 Tax=Ruegeria pomeroyi RepID=CCME2_SILPO Length = 139 Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 12/141 (8%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R+ RL + V L L+ YA+R I F TP E+ P + LR+GG Sbjct: 8 RRVRLILFSGV--ALVSATALIGYAMRDGIQFFRTPTEV------ATDPPAANEVLRIGG 59 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 MV GS+ RD + +F + D E S +SY GI+PDLFREG+G + G + G A Sbjct: 60 MVEHGSLVRDGANF--SFRVTDGETSFPISYVGIVPDLFREGEGTIATGSV-IGGVFRAT 116 Query: 125 EVLAKHDENYTPPEVEKAMEA 145 E+LAKHDE Y P E+ + MEA Sbjct: 117 EILAKHDEVYMPSELAE-MEA 136 >UniRef50_Q0C2L6 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=CCME_HYPNA Length = 141 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 7/116 (6%) Query: 31 RSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYD-AEG 89 R N +LFYTP E+L K +P G+ ++VGG V PGS+ + FT+ D + Sbjct: 30 RENANLFYTP-EVLAEK----GLPREGREVKVGGWVEPGSLTYADGGATMRFTVIDNSPS 84 Query: 90 SVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEA 145 ++ VS+ G+ PDLFREGQGVV G A+++LAKHDENY P E+ K +EA Sbjct: 85 TITVSFNGVAPDLFREGQGVVATGTFTPEGEFTARQLLAKHDENYQPREL-KPLEA 139 >UniRef50_A9IR17 Cytochrome c-type biogenesis protein ccmE n=5 Tax=Bartonella RepID=CCME_BART1 Length = 159 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 7/135 (5%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+K RL I +A+ LV+YA+R + F P EI T++ G+ LR+G Sbjct: 19 RKKKRLLIILLCCLVMAIAASLVVYAMRHAVSFFRMPSEI------TREDILTGRPLRLG 72 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G V G+V+ S V F + D + V + G LPDLFREGQGV+V+G +K + Sbjct: 73 GFVEKGTVRYVGES-GVIFFVTDNKKHEKVVFNGALPDLFREGQGVIVEGHFDKQGFFIG 131 Query: 124 KEVLAKHDENYTPPE 138 +LAKHD Y P E Sbjct: 132 TRILAKHDATYMPKE 146 >UniRef50_Q2GKI0 Cytochrome c-type biogenesis protein ccmE n=6 Tax=Anaplasma RepID=CCME_ANAPZ Length = 141 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 9/136 (6%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + K L++A + +A L VL+ L +I F TP E++ ++ + P + Sbjct: 1 MQRKHKRILFVAVSFIA-LGCVSAFVLFELSKSISFFCTPTELVADPIKSSRYP-----I 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGGM++ GS+ R +S VTF+I D ++V+Y G+LP +F E G + +G G Sbjct: 55 RVGGMIVKGSIVRHGDS--VTFSITDLGTELEVTYRGVLPPMFGEDVGAIAKGRFVDGVF 112 Query: 121 ILAKEVLAKHDENYTP 136 I A+E+LAKHDE Y P Sbjct: 113 I-AEELLAKHDEKYMP 127 >UniRef50_C8N960 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N960_9GAMM Length = 151 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Query: 60 LRVGGMVMPGSVQRDPNSLKVTFTIYDAEGS-VDVSYEGILPDLFREGQGVVVQGELEKG 118 +RVGGMV S+ R+ +SL V F I D + + V+Y GILPDLFRE QGV+ +G L Sbjct: 55 IRVGGMVEEHSLTREGDSLTVRFRITDFQHPPLAVTYTGILPDLFREKQGVIARGTLGAD 114 Query: 119 NHILAKEVLAKHDENYTPPEVEKAME 144 A E+LAKHDENY PPEV+ M+ Sbjct: 115 GVFRADEILAKHDENYMPPEVQADMQ 140 >UniRef50_A8LMF5 Cytochrome c-type biogenesis protein ccmE n=36 Tax=Rhodobacterales RepID=CCME_DINSH Length = 160 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 13/133 (9%) Query: 25 LVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTI 84 ++ A+R I+ F +P E+ + P + R+GG+V G++ R S TF + Sbjct: 26 MIGTAMRDGINFFRSPSEV------AEAPPPESEVFRIGGLVEEGTLVRG-ESETTTFMV 78 Query: 85 YDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAME 144 D S+ VSY G+LPDLF E +G V G ++ G +A EVLA+HDE Y P EV A+ Sbjct: 79 TDGGASIPVSYTGVLPDLFGENEGTVALGSMQNG-VFMATEVLARHDETYMPKEVVDAL- 136 Query: 145 ANHRRPASVYKDP 157 + VYKDP Sbjct: 137 ----KEQGVYKDP 145 >UniRef50_Q5NN30 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Zymomonas mobilis RepID=CCME_ZYMMO Length = 146 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 6/113 (5%) Query: 25 LVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTI 84 L L A + F+TP + + +P + +R+GGMV GS+ R+ + + + F + Sbjct: 24 LALVAFKKQAAYFFTPTDAV-----KAHLP-ANRNIRLGGMVERGSLIREKDGVTIHFRV 77 Query: 85 YDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPP 137 D + VSY GI+PDLFREG GVV G + A+ +LAKHDE Y PP Sbjct: 78 TDGYQKIAVSYRGIVPDLFREGSGVVADGHFDPSGSFTAETILAKHDERYMPP 130 >UniRef50_B5J4A6 Cytochrome c-type biogenesis protein CcmE n=4 Tax=Rhodobacteraceae RepID=B5J4A6_9RHOB Length = 163 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 15/146 (10%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSN--IDLFYTPGEILYGKRETQQMPEVGQRLR 61 RRK L ++ +AG+ V+ AL N F +P E++ + P+ + R Sbjct: 11 RRKQVLVVSFVAIAGV-----FVILALLPNDSFQFFRSPTEVV------TEPPKETELFR 59 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GGMV GS+ R L+V+F + D V V++ ILP LF EGQG+V QG G Sbjct: 60 IGGMVQDGSIVRG-EGLEVSFIVTDCWNIVPVTFNDILPSLFEEGQGMVGQGHYINGT-F 117 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANH 147 A E+LAKHDE Y P EV EA + Sbjct: 118 EAVEILAKHDETYMPAEVVNMQEAQN 143 >UniRef50_C1D1H5 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Deinococcus deserti VCD115 RepID=CCME_DEIDV Length = 158 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 10/141 (7%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEV-GQRLRV 62 R++N L + A L L + L +++ F TP E QQ ++ G+ +R+ Sbjct: 19 RKRNPLPTVLGITALLGLAGFIAFGNLNKSLEYFVTPTEY------QQQAAQLKGRPVRI 72 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GG+V +V+ +P SL+++FT+ D S V Y G + DLF+E QGVVV+GE E G Sbjct: 73 GGLVK--AVKYNPQSLELSFTVTDGGASFPVRYRGAVSDLFKENQGVVVRGEFE-GQTFQ 129 Query: 123 AKEVLAKHDENYTPPEVEKAM 143 A+E++ KH E Y P+ + + Sbjct: 130 ARELIVKHSEQYDVPKTQAEL 150 >UniRef50_Q96326 G1p n=8 Tax=Magnoliophyta RepID=Q96326_ARATH Length = 256 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 25/162 (15%) Query: 8 RLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVM 67 RLW + +A + +VL + + + TP + + E + R+GG+V+ Sbjct: 83 RLWTYALTFSCIAGFVVIVLNQFQDQLVFYLTPSDAMEKFAEN----PTKNKFRLGGLVL 138 Query: 68 PGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQG-------ELEK--- 117 GSV + S ++ F I D + V Y+G LPDLFREG VVV+G E+ K Sbjct: 139 EGSVAQPAASQEMEFVITDLITDILVRYKGSLPDLFREGHSVVVEGFIKPYTDEVRKEVS 198 Query: 118 -----------GNHILAKEVLAKHDENYTPPEVEKAMEANHR 148 A EVLAKHDE Y P EV A+E N + Sbjct: 199 TKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAAAIEKNKK 240 >UniRef50_A1SI32 CcmE/CycJ protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SI32_NOCSJ Length = 154 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 69/139 (49%), Gaps = 7/139 (5%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R RL + V L + + L + + TP E++ G + E+ QR+R+G Sbjct: 22 RGSTRLRVVVCVAIILGALGWIAVRGLTGSFVYYLTPTEVVSGGQA-----EISQRIRLG 76 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G V PGSV RD L TFT+ D E S+ V G +P LFR GQGVV++G L A Sbjct: 77 GYVEPGSVTRDDQGL--TFTVSDGEESIRVVSTGSVPQLFRAGQGVVLEGALGADRLFHA 134 Query: 124 KEVLAKHDENYTPPEVEKA 142 +L KHD Y P+ K Sbjct: 135 DTLLVKHDGEYRAPDPTKG 153 >UniRef50_B9GW99 Predicted protein (Fragment) n=2 Tax=Embryophyta RepID=B9GW99_POPTR Length = 200 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 25/162 (15%) Query: 8 RLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVM 67 RLW + +A I +VL + + + TP + + E + + R+GG+V+ Sbjct: 39 RLWTYALTFSCIAGFIVIVLNNFQDQLVFYITPSDAV----EKFKNNPSKNKFRLGGLVL 94 Query: 68 PGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKE-- 125 GSV S ++ F + D + V YEG LPDLFREG VVV+G +++ + + KE Sbjct: 95 EGSVVHPLTSPEMEFVVTDLITDILVKYEGSLPDLFREGHSVVVEGFMKELDDKVRKEVG 154 Query: 126 -------------------VLAKHDENYTPPEVEKAMEANHR 148 VLAKHDE Y P EV A+E N + Sbjct: 155 LKNVSGKARSGECYFKAFDVLAKHDEKYMPQEVAAAIERNKK 196 >UniRef50_Q1IYZ2 CcmE/CycJ protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IYZ2_DEIGD Length = 155 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 12/144 (8%) Query: 11 IACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGS 70 + VLA + LT + L +++ F TP E L + E + P LR+GG+V Sbjct: 20 VVLGVLALVGLTAFIAFGNLGKSLEYFVTPTEYLQERAELEGRP-----LRIGGLVK--D 72 Query: 71 VQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKH 130 VQ +P +L + F + D + V Y G + DLF+E QGVVV+G + GN A E++ KH Sbjct: 73 VQYNPQTLDLKFNVTDGGATFPVQYHGAVSDLFKENQGVVVRGTFQ-GNTFHATELVVKH 131 Query: 131 DENYTPP----EVEKAMEANHRRP 150 E Y P ++++ ++ N +P Sbjct: 132 SEEYQVPKTQADLKRLLQENQSQP 155 >UniRef50_Q5SIG4 Cytochrome c-type biogenesis protein ccmE n=4 Tax=Thermaceae RepID=CCME_THET8 Length = 142 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 10/127 (7%) Query: 16 LAGLALTIG----LVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSV 71 L G+ + +G +V L N+ F TP E L + Q P +R+GG+V PG+V Sbjct: 6 LLGILVILGALGYMVFGGLGRNLVYFLTPSEYLQDQARYQNRP-----VRLGGLVKPGTV 60 Query: 72 QRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHD 131 Q D + L++ F + D V V ++G P +F+EGQGVVV+G ++G +L KH Sbjct: 61 QYDKDRLELRFVLTDGVAEVPVFHKGTPPGMFKEGQGVVVEGRFQEGV-FQGTNLLVKHS 119 Query: 132 ENYTPPE 138 E Y PP+ Sbjct: 120 ETYQPPK 126 >UniRef50_Q2GCU8 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Neorickettsia RepID=CCME_NEOSM Length = 135 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 12/138 (8%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + R R W + + + L+L+ L +I FY P ++ ++ + + Sbjct: 1 MLLLRWKRFWFLSLGILLFSGVVSLMLFNLSESISFFYLPSDV-------ARVVASNREI 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 +VGG++ +D V F + D ++V YEGILP L ++G VVV E G Sbjct: 54 KVGGIIKAIKKSKDG----VRFLLSDGAAEIEVLYEGILPSLVQDGINVVVVARFE-GGL 108 Query: 121 ILAKEVLAKHDENYTPPE 138 +LAK VL KHDE Y PPE Sbjct: 109 LLAKRVLVKHDERYYPPE 126 >UniRef50_A3VRG5 Cytochrome c-type biogenesis transmembrane protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VRG5_9PROT Length = 158 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Query: 44 LYGKRETQQMPEVGQR-LRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL 102 YG +G R +R+GG+V GS+ R + V+FT+ D +V V ++G LP L Sbjct: 44 FYGPSALPSPQMLGDREVRLGGLVEKGSLSRGEGT-TVSFTVSDGVAAVPVEFDGSLPAL 102 Query: 103 FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEAN 146 EG GV+ QG L +A+ VLA+HDENY PEV A++A Sbjct: 103 VAEGDGVIAQGTLNDQGIFIAETVLARHDENYMAPEVADALKAT 146 >UniRef50_D2VQC0 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VQC0_NAEGR Length = 309 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 72/135 (53%), Gaps = 5/135 (3%) Query: 15 VLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRD 74 + ++ I +++ ++ + +P +++ + Q P +++R+GG+V G++Q Sbjct: 156 IFTIASVVIYIIVETNNDRMNYYVSPSKVMDNR---QDFPP-DRKIRIGGIVKEGTIQHG 211 Query: 75 PNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDE-N 133 N+ F I D + +++ Y+G+LPDLF E + +G + + + +LAKHD+ N Sbjct: 212 ENNFLTIFKITDLKYDIEIEYKGVLPDLFEENSTAICEGFMLGHSKLKCTNILAKHDQRN 271 Query: 134 YTPPEVEKAMEANHR 148 PPE+ +E N R Sbjct: 272 GMPPEIAYEVEKNRR 286 >UniRef50_B3CU35 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Orientia tsutsugamushi RepID=B3CU35_ORITI Length = 130 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 11/139 (7%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + +R I ++ ++ + L+L A NI FYTP IL +E + G+ Sbjct: 1 MYFKINSRFRIVFLLILSISCGVFLILRAFSQNIIFFYTPTVILSQSKEGVVVRVGGKVK 60 Query: 61 RVGGMVMPGSVQR-DPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 GS+ + PN K F I D + V ++GILP LF+EGQ VV +G + + Sbjct: 61 H-------GSINKISPNENK--FIITDNTSELQVYFKGILPPLFKEGQEVVAKGYMNQKL 111 Query: 120 HILAKEVLAKHDENYTPPE 138 I A ++LAKHDE Y PPE Sbjct: 112 FI-ADDLLAKHDERYMPPE 129 >UniRef50_D1H5F6 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H5F6_VITVI Length = 162 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Query: 58 QRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEK 117 QR ++P S +S + F + D + V Y+G LPDLFREG VVV+G ++ Sbjct: 54 QRGDYSHRLVPISRSNGAHSPDMEFVVTDLITDILVRYQGALPDLFREGHSVVVEGFVKP 113 Query: 118 GNHILAK-EVLAKHDENYTPPEVEKAMEANHRR 149 G++ + EVLAKHDE Y P EV +A+E N ++ Sbjct: 114 GDYYFSGIEVLAKHDEKYMPKEVAEAIERNKKK 146 >UniRef50_D1CC97 CcmE/CycJ protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CC97_THET1 Length = 146 Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 12/126 (9%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 RR+N + ++A A +LY + SN ++ + Y K Q G ++RV Sbjct: 18 RRRNLGLLVVGLVAAAA-----ILYLVVSN----FSANTVYYLKVSELQSSYHGGQVRVS 68 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G V+PGS+ R + K++FT YD G + V Y+G++PD+F++ VVV+G + G A Sbjct: 69 GKVLPGSISRQGD--KLSFTAYDGSGRMRVEYQGVVPDIFKDNADVVVEGTYD-GQVFHA 125 Query: 124 KEVLAK 129 +LAK Sbjct: 126 HTLLAK 131 >UniRef50_C1XMN8 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMN8_MEIRU Length = 145 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 14/131 (10%) Query: 25 LVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTI 84 L+ L N+ F TP E Q P +R+GG+V PG++ +P +L++ F + Sbjct: 21 LIFGGLGQNLVYFITPSEYFQQVDRYQNRP-----VRLGGLVKPGTLDYNPQTLELRFVV 75 Query: 85 YDAEGSVDVSYEGILPD-LFREGQGVVVQGELEKGNHILAKEVLAKHDENY-------TP 136 D + + G P LF E +GVVV+G E G +++ +L KH E Y TP Sbjct: 76 TDGVKEIPIRSSGTTPPALFGENRGVVVEGRFE-GETFVSQNLLVKHSETYQAPKEGWTP 134 Query: 137 PEVEKAMEANH 147 +V K +E Sbjct: 135 EQVRKLIEETQ 145 >UniRef50_C1A6K1 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6K1_GEMAT Length = 151 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 11/139 (7%) Query: 16 LAGLALTIGLVLYALRSNID----LFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSV 71 L G L +G Y + S+ID + TP E+ + T V ++VG V+ G++ Sbjct: 8 LLGGVLVLGTAGYLMASSIDETATYYLTPSEL--AGKVTANPRFVQNGVKVGARVVSGTI 65 Query: 72 QRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHD 131 R P ++TF + D + DV Y G++PD F +G VVV+G L+ A +LAK Sbjct: 66 VRQPGGRELTFKMTDGAHTYDVHYRGLIPDTFTDGVDVVVEGRLDATGTFQATTLLAKCA 125 Query: 132 ENYTPPEVEKAMEANHRRP 150 Y E A E + P Sbjct: 126 SRY-----ENAPEKYQQTP 139 >UniRef50_D1C3N4 CcmE/CycJ protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3N4_SPHTD Length = 150 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%) Query: 10 WIACAVLAG---LALTIGLVLY-ALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 W+ +L LAL +G ++Y +++ ++ + G+ + Q G R+RVGG Sbjct: 18 WLNTKILVAGVVLALAVGFLIYNSMQGTAAAYF----VTVGELQAQADKVDGTRVRVGGD 73 Query: 66 VMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKE 125 V+PGS+Q + F + D ++DV Y ++PD+F + V+V+G KG A Sbjct: 74 VVPGSIQMGGPGEPIRFQVTDGTHTMDVVYREVVPDIFSDHVQVIVEGTFHKGQEFQADT 133 Query: 126 VLAKHDENY 134 +L K + Sbjct: 134 LLTKCPSRF 142 >UniRef50_B9L1G4 Cytochrome c-type biogenesis protein CycJ n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1G4_THERP Length = 148 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 10/134 (7%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYA--LRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 IR RL + V+AG +G ++Y + F T E+ E G+R+ Sbjct: 14 IRLDVRLLVLALVMAG---AVGYLMYTGLQGTAASYFVTVSELQARASEVD-----GRRV 65 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGG V+ GS+ R + F I D ++V Y G+LPD+F EG+ V+V+G G Sbjct: 66 RVGGDVVTGSIVRGGPGEPIHFRIGDGTSELEVVYSGVLPDIFAEGRHVIVEGLYRNGQP 125 Query: 121 ILAKEVLAKHDENY 134 + A VL + + Sbjct: 126 VQADSVLTQCPSRF 139 >UniRef50_Q9RXG6 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Deinococcus radiodurans RepID=CCME_DEIRA Length = 168 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 12/127 (9%) Query: 9 LWIACAVLAGLALTIG-LVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVM 67 L +A A + GL IG +VL SN+ + P E +++T + G+ LR+GG+ Sbjct: 26 LLVAGAAVLGL---IGYMVLGNANSNLVYYVLPSEY---QQDTAKF--AGKTLRMGGLAK 77 Query: 68 PGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVL 127 RD +LK F + D + + V Y+G +PD+FR VV++G++++G K +L Sbjct: 78 DVVYNRDTLALK--FNMTDGQVAYPVQYQGAVPDMFRNDAVVVMEGQMQQG-VFHGKSLL 134 Query: 128 AKHDENY 134 KH E Y Sbjct: 135 VKHSEEY 141 >UniRef50_UPI0001C321C1 Cytochrome c-type biogenesis protein CcmE-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321C1 Length = 157 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 12/119 (10%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ RK R+ + A A + L L+ + + D T G++L R G+ Sbjct: 1 MDPSRKRRIRLVVAATAAMLLASALIYTSFSAGSDE-KTAGQLLESAR-------AGETY 52 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDA--EGSVDVSYEGILPDLFREGQGVVVQGELEK 117 + G V P SV+R+ L F I D E S V Y G++PD FREG+GV+++ +L++ Sbjct: 53 TLAGTVAPNSVRREDGVL--WFRILDPHREVSARVRYTGLVPDPFREGRGVMIKVQLDR 109 >UniRef50_Q28QS7 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Jannaschia sp. CCS1 RepID=Q28QS7_JANSC Length = 90 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R GG+V ++ R S +TF + D G+V VSY GIL DL + QG++ GN Sbjct: 20 RNGGLVEERTLMRGEGS-TITFRVTDGCGAVPVSYNGILRDLIAKAQGMIGTRRFIDGN- 77 Query: 121 ILAKEVLAKHDEN 133 +A E+LA+HDE Sbjct: 78 CVATEILARHDET 90 >UniRef50_B8D1Q8 Putative cytochrome c-type biogenesis protein CcmE n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1Q8_HALOH Length = 128 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 51/97 (52%) Query: 19 LALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSL 78 + LT+ +VL + F Y E + + + Q LR+ G ++ SV+ P+ Sbjct: 8 IILTLIIVLVVSYTTYISFNNSATYYYTISEARGLEGIRQHLRIKGNLIKDSVKWSPDLS 67 Query: 79 KVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGEL 115 ++ FT+ D + ++ + Y G++PD F+ + V+V+G+ Sbjct: 68 ELKFTLTDGQHNLKMIYSGVVPDNFKHSREVIVEGKF 104 >UniRef50_Q1D7C0 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Cystobacterineae RepID=Q1D7C0_MYXXD Length = 158 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 11/138 (7%) Query: 6 KNRLWIACAVLAGLALTIGLVLYA-LRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 +NRL IA L +G V + + N+ +++P E+L Q +R+GG Sbjct: 6 RNRL-IALGALLVAGAGLGFVAFGNIGENLVYYWSPSEML-----GQGDKAYSATIRLGG 59 Query: 65 MVMPGSVQRDPNSLKVTFTIYD--AEG--SVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 +V GS+Q + + F + D EG SV V P +FR+ GVVV+G +K Sbjct: 60 VVEAGSIQWNAEHTTLQFRVADDVKEGAPSVLVRATETPPQMFRDKIGVVVEGTYDKSGV 119 Query: 121 ILAKEVLAKHDENYTPPE 138 + ++ H Y P+ Sbjct: 120 FSSNRLMVNHSNEYRAPK 137 >UniRef50_C7LS40 Cytochrome c-type biogenesis protein CcmE n=3 Tax=Desulfovibrionales RepID=C7LS40_DESBD Length = 153 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%) Query: 6 KNRLWIACAVLAGLALTIGLVLYA-LRSNIDLFYTPGEILYGKRETQQMP-EVGQRLRVG 63 KN+ W+ + + +G +L++ L N F E L MP E + R+ Sbjct: 11 KNQKWVYLVAVLLVGAGVGYLLFSGLSQNSVYFLNVSEAL-------AMPAEKLSQARLF 63 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEG---SVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 GMV ++ DP+++ V+F D + ++ V Y G +PD F+ G V+++G Sbjct: 64 GMVAEKDIEHDPSAMGVSFYALDKDDPGKAIRVHYRGAVPDTFKAGVEVILEGSFTADTR 123 Query: 121 IL-AKEVLAKHDENYTPPEVEKAMEANHRRPAS 152 + A +L K P + EK + R P S Sbjct: 124 VFEATTLLTK-----CPSKYEKNEKGQMRPPGS 151 >UniRef50_C1SLI4 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLI4_9BACT Length = 134 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 11/135 (8%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTP-GEILYGKRETQQMPEVGQRLR 61 +++ + A V AG IG +L + S+ ++Y E+L+ + + + +R Sbjct: 1 MKKSWKFLFAAVVFAG---AIGYLLVSGFSSESVYYLEVSEVLHNPEKFNK-----KGMR 52 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEG-SVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 V G V+ G++ +D + F I D G ++ V Y GI+PD F+E V+++G ++ Sbjct: 53 VSGDVVTGTIVKDFKKQYLEFDIADTSGQAMKVIYNGIIPDTFKEDIQVIIEGRFDQDAD 112 Query: 121 IL-AKEVLAKHDENY 134 + A VL K Y Sbjct: 113 VFNAATVLTKCPSKY 127 >UniRef50_C7M2R0 CcmE/CycJ protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2R0_ACIFD Length = 162 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 10/133 (7%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYAL--RSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 RR R + VL L +V+ A+ +S ++ + T + L KR T GQ R Sbjct: 21 RRTRRRMLQSLVLFAAILVALVVVLAMGAKSALEYYLTVPQAL-AKRATL----AGQTFR 75 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 + G+V+PGS+Q P V F + V G P LF+ VVVQG E G+ Sbjct: 76 MEGIVVPGSIQSTPEG--VDFALRYDRAVARVVEIGNPPQLFQPSIPVVVQGHFE-GSTF 132 Query: 122 LAKEVLAKHDENY 134 ++ ++ KH +Y Sbjct: 133 VSNLIMVKHTSSY 145 >UniRef50_Q01YS2 Cytochrome c-type biogenesis protein, CcmE-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YS2_SOLUE Length = 148 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 6/90 (6%) Query: 49 ETQQMPE--VGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGI--LPDLFR 104 E QM + G R RVGG V GS+QR N +V F + + V+Y G LPD F+ Sbjct: 38 ELSQMGDRAYGARTRVGGDVEAGSIQRVGN--QVQFVLVQDTTKLKVAYTGSDPLPDTFK 95 Query: 105 EGQGVVVQGELEKGNHILAKEVLAKHDENY 134 +G + G+L+K A + AK Y Sbjct: 96 DGAQALADGKLDKDGVFRAARIQAKCASKY 125 >UniRef50_Q1IP94 Cytochrome c-type biogenesis protein, CcmE-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP94_ACIBL Length = 153 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 6/95 (6%) Query: 48 RETQQM-PEV-GQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGIL--PDLF 103 +E Q M PEV +RLRV G V GS++R +V FT+ + +++VSY G PD F Sbjct: 43 QEIQTMGPEVYEKRLRVAGTVAEGSIKR--QGTRVEFTLEEQGKTLNVSYIGTEAPPDTF 100 Query: 104 REGQGVVVQGELEKGNHILAKEVLAKHDENYTPPE 138 ++ + +G++ + A+++ AK Y P + Sbjct: 101 KDKSQALAEGKMGRDGVFHAQKIQAKCASKYAPKQ 135 >UniRef50_A9GE04 Putative membrane protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GE04_SORC5 Length = 188 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 57 GQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSY-EGILPDLFRE----GQGVVV 111 G+++RV G ++PG++ + + + F I+ + + V Y + ++PD FR+ G V V Sbjct: 85 GRKVRVEGELVPGTLVKRDSPCEYRFQIHGTQAPLPVRYAQCVIPDTFRDVPSGGVQVTV 144 Query: 112 QGELEKGNHILAKEVLAKHDENYTP 136 +G L +G A V+AK Y P Sbjct: 145 EGTLSQGGDFEASLVMAKCTSKYDP 169 >UniRef50_B8DNC7 Cytochrome c-type biogenesis protein CcmE n=10 Tax=Desulfovibrionales RepID=B8DNC7_DESVM Length = 140 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 9/130 (6%) Query: 16 LAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMP-EVGQRLRVGGMVMPGSVQRD 74 L LAL +G V Y + S F E MP E Q +R+ G V P + R Sbjct: 11 LVALALFLGGVGYLVFSG---FSQNSVYFLNVSEALAMPSEKLQSIRMFGTVAPEGIARL 67 Query: 75 PNSLKVTFTIYDAEG---SVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHD 131 + V F + D + +V V Y G +PD F+EG V+V+G + +G A E AK Sbjct: 68 DDGPGVRFLLEDKDNPGQTVRVMYRGAVPDTFKEGVEVIVEGGMPQGGA--ASEFRAKTL 125 Query: 132 ENYTPPEVEK 141 P + EK Sbjct: 126 MTKCPSKYEK 135 >UniRef50_Q648Q0 Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos37B2 RepID=Q648Q0_9ARCH Length = 131 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 38/81 (46%) Query: 55 EVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGE 114 +G+ +RV G V G++ N + FT+ D+ V+VSY P EG V G Sbjct: 41 HIGKLVRVNGTVAVGTLHYIDNGSTILFTLTDSLKDVNVSYAEHQPPNLVEGNHAAVTGM 100 Query: 115 LEKGNHILAKEVLAKHDENYT 135 L N I A +++ K Y+ Sbjct: 101 LLPNNTISANQIITKCPSKYS 121 >UniRef50_C1F370 Putative cytochrome c-type biogenesis protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F370_ACIC5 Length = 171 Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 11/129 (8%) Query: 11 IACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGS 70 +A A+L L L + A +SN + T E+ +T + LRV G V+PGS Sbjct: 10 VALAILVILGSIGYLAVSAEQSNKSYYVTIQEL-----QTMGNKAYTRHLRVSGQVVPGS 64 Query: 71 VQRD-PNSLKVTFTIYDAEGSVDVSYEG--ILPDLFREGQGVVVQGELEKGNHILAKEVL 127 ++R PN+ FT+Y+ + V Y G PD F+ + G + A E+ Sbjct: 65 IERQGPNA---NFTLYEQNRKLRVEYVGEEPPPDTFKGNAPALAVGTFGRDGVFHATELQ 121 Query: 128 AKHDENYTP 136 AK +Y P Sbjct: 122 AKCASHYAP 130 >UniRef50_A0CI93 Chromosome undetermined scaffold_19, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0CI93_PARTE Length = 181 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 25/130 (19%), Positives = 61/130 (46%), Gaps = 13/130 (10%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEV--GQRLRVG 63 K ++ A +LAG+ ++ + + F+ ++++ + + ++ Q + Sbjct: 32 KGSIYRAIGILAGIQISATFISH--------FFVDKQVIFPVEDYLKNDKIKENQHYSIA 83 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQG---ELEKGNH 120 G++ PG+++ +L V F + + + + V Y G F+EG+ +V+ +L+ N Sbjct: 84 GIIKPGTIEIKRGTLDVKFILTNFDDDITVIYRGETKYEFKEGETIVLTAYTPDLKNKNR 143 Query: 121 ILAKEVLAKH 130 I+ + KH Sbjct: 144 IIGLDYQTKH 153 >UniRef50_UPI00006CB2D3 hypothetical protein TTHERM_00455200 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB2D3 Length = 195 Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 3/76 (3%) Query: 59 RLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQG---EL 115 + ++ G++ GS + SL+ F I D + ++V Y+GI F+EG+ +V+ +L Sbjct: 93 KFQIFGVLKVGSTKMQRGSLETRFVITDFKEEIEVFYKGITKFEFKEGETIVLTAYCPDL 152 Query: 116 EKGNHILAKEVLAKHD 131 ++ ++A + L KH Sbjct: 153 KERKKVIAIDYLTKHS 168 >UniRef50_Q12WM0 Cytochrome c-type biogenesis protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WM0_METBU Length = 126 Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 16/138 (11%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN +RK A+L LA+ +V+ +++ G ++ T VGQ++ Sbjct: 1 MNKKRK-------AILTILAIVAVMVIGLWGVDVE----QGYLMVSDITTSPQDHVGQKV 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGS---VDVSYEGILPDLFREGQGVVVQGELEK 117 G+V G++ P V+FT+ DAE +D+ Y LP EG + + G + Sbjct: 50 STMGLVKNGTLSISPE--MVSFTLVDAEDKEHEIDIEYTADLPANIVEGNSISLTGTMIS 107 Query: 118 GNHILAKEVLAKHDENYT 135 + I A++++ Y+ Sbjct: 108 ESKIEAEQIVIGCPSKYS 125 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A7FGJ2 Cytochrome c-type biogenesis protein ccmE n=135 ... 217 9e-56 UniRef50_A3N216 Cytochrome c-type biogenesis protein ccmE n=93 T... 198 5e-50 UniRef50_A6V817 Cytochrome c-type biogenesis protein ccmE n=80 T... 194 7e-49 UniRef50_Q1ZIX0 Cytochrome c-type biogenesis protein CcmE n=4 Ta... 193 2e-48 UniRef50_C6N3B8 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 188 7e-47 UniRef50_A9W2K2 Cytochrome c-type biogenesis protein ccmE n=28 T... 186 2e-46 UniRef50_Q46RW7 Cytochrome c-type biogenesis protein ccmE n=10 T... 183 2e-45 UniRef50_Q69AY8 Cytochrome c-type biogenesis protein ccmE n=27 T... 182 2e-45 UniRef50_D0J750 Cytochrome C-type biogenesis protein n=1 Tax=Com... 181 6e-45 UniRef50_C6P0C2 CcmE/CycJ protein n=1 Tax=Sideroxydans lithotrop... 181 7e-45 UniRef50_Q2RYF4 Cytochrome c-type biogenesis protein ccmE n=7 Ta... 180 1e-44 UniRef50_A4YRM0 Cytochrome c-type biogenesis protein ccmE n=28 T... 180 1e-44 UniRef50_C5S795 CcmE/CycJ protein n=1 Tax=Allochromatium vinosum... 180 1e-44 UniRef50_C7RAW0 CcmE/CycJ protein n=1 Tax=Kangiella koreensis DS... 178 7e-44 UniRef50_A5WHG7 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 173 2e-42 UniRef50_Q21JJ9 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 172 3e-42 UniRef50_A6X2C8 Cytochrome c-type biogenesis protein ccmE n=37 T... 172 4e-42 UniRef50_Q3BSK6 Cytochrome c-type biogenesis protein ccmE 2 n=19... 172 4e-42 UniRef50_Q478K9 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 172 5e-42 UniRef50_B8H1L5 Cytochrome c-type biogenesis protein ccmE n=4 Ta... 171 6e-42 UniRef50_D0Y445 CcmE/CycJ protein n=1 Tax=Caulobacter segnis ATC... 170 2e-41 UniRef50_B6IVR1 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 170 2e-41 UniRef50_A5CWG8 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 166 2e-40 UniRef50_Q0AR54 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 165 4e-40 UniRef50_A0LDE3 CcmE/CycJ protein n=1 Tax=Magnetococcus sp. MC-1... 163 2e-39 UniRef50_Q87BH5 Cytochrome c-type biogenesis protein ccmE n=7 Ta... 162 3e-39 UniRef50_Q96326 G1p n=8 Tax=Magnoliophyta RepID=Q96326_ARATH 160 1e-38 UniRef50_Q0A805 Cytochrome c-type biogenesis protein ccmE n=18 T... 159 2e-38 UniRef50_D0RQU2 CcmE/CycJ protein n=1 Tax=alpha proteobacterium ... 158 5e-38 UniRef50_Q4FNY3 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 156 2e-37 UniRef50_D2MJF2 CcmE/CycJ protein n=1 Tax=Candidatus Poribacteri... 155 6e-37 UniRef50_B9GW99 Predicted protein (Fragment) n=2 Tax=Embryophyta... 154 7e-37 UniRef50_B0SVC7 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 154 7e-37 UniRef50_Q2G8J0 Cytochrome c-type biogenesis protein ccmE n=7 Ta... 153 2e-36 UniRef50_Q5NN30 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 151 4e-36 UniRef50_A8PN63 CytoChrome c-type biogenesis protein CcmE (Cytoc... 151 7e-36 UniRef50_A8LMF5 Cytochrome c-type biogenesis protein ccmE n=36 T... 150 1e-35 UniRef50_C8N960 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 150 2e-35 UniRef50_Q2GKI0 Cytochrome c-type biogenesis protein ccmE n=6 Ta... 149 3e-35 UniRef50_Q5LL36 Cytochrome c-type biogenesis protein ccmE 2 n=1 ... 149 3e-35 UniRef50_C0R3Z7 Cytochrome c-type biogenesis protein ccmE n=6 Ta... 148 7e-35 UniRef50_Q5FHG0 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 147 1e-34 UniRef50_A9IR17 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 147 1e-34 UniRef50_Q5SIG4 Cytochrome c-type biogenesis protein ccmE n=4 Ta... 145 7e-34 UniRef50_B4SPY3 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 144 7e-34 UniRef50_B5J4A6 Cytochrome c-type biogenesis protein CcmE n=4 Ta... 144 9e-34 UniRef50_C6XIM0 CcmE/CycJ protein n=1 Tax=Hirschia baltica ATCC ... 143 2e-33 UniRef50_A8GWM8 Cytochrome c-type biogenesis protein ccmE n=15 T... 141 9e-33 UniRef50_Q1IYZ2 CcmE/CycJ protein n=1 Tax=Deinococcus geothermal... 140 1e-32 UniRef50_C1D1H5 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 140 1e-32 UniRef50_B3CU35 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 140 2e-32 UniRef50_A1SI32 CcmE/CycJ protein n=1 Tax=Nocardioides sp. JS614... 133 2e-30 UniRef50_C1A6K1 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 131 6e-30 UniRef50_D2VQC0 Predicted protein n=1 Tax=Naegleria gruberi RepI... 131 6e-30 UniRef50_Q0C2L6 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 130 1e-29 UniRef50_Q2GCU8 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 128 6e-29 UniRef50_C1XMN8 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 123 1e-27 UniRef50_A3VRG5 Cytochrome c-type biogenesis transmembrane prote... 122 3e-27 UniRef50_Q1D7C0 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 122 4e-27 UniRef50_D1C3N4 CcmE/CycJ protein n=1 Tax=Sphaerobacter thermoph... 116 2e-25 UniRef50_Q9RXG6 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 114 8e-25 UniRef50_C7LS40 Cytochrome c-type biogenesis protein CcmE n=3 Ta... 114 1e-24 UniRef50_D1H5F6 Whole genome shotgun sequence of line PN40024, s... 114 1e-24 UniRef50_D1CC97 CcmE/CycJ protein n=1 Tax=Thermobaculum terrenum... 113 2e-24 UniRef50_B9L1G4 Cytochrome c-type biogenesis protein CycJ n=1 Ta... 112 3e-24 UniRef50_C1SLI4 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 107 1e-22 UniRef50_B8D1Q8 Putative cytochrome c-type biogenesis protein Cc... 104 8e-22 UniRef50_A9GE04 Putative membrane protein n=1 Tax=Sorangium cell... 101 7e-21 UniRef50_Q01YS2 Cytochrome c-type biogenesis protein, CcmE-like ... 99 4e-20 UniRef50_Q1IP94 Cytochrome c-type biogenesis protein, CcmE-like ... 98 7e-20 UniRef50_C7M2R0 CcmE/CycJ protein n=1 Tax=Acidimicrobium ferroox... 97 2e-19 UniRef50_Q28QS7 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 90 2e-17 UniRef50_UPI0001C321C1 Cytochrome c-type biogenesis protein CcmE... 86 3e-16 Sequences not found previously or not previously below threshold: UniRef50_B8DNC7 Cytochrome c-type biogenesis protein CcmE n=10 T... 102 3e-21 UniRef50_Q311W9 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 96 4e-19 UniRef50_C1F370 Putative cytochrome c-type biogenesis protein n=... 91 2e-17 UniRef50_D1J8Y7 Putative cytochrome c-type biogenesis protein n=... 80 3e-14 UniRef50_D0LV11 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 79 4e-14 UniRef50_A6GFN2 Putative uncharacterized protein n=1 Tax=Plesioc... 77 2e-13 UniRef50_Q3ACB4 Putative cytochrome c-type biogenesis protein Cc... 76 3e-13 UniRef50_C8S810 Putative uncharacterized protein n=1 Tax=Ferrogl... 75 6e-13 UniRef50_A8VWW5 Putative uncharacterized protein n=1 Tax=Bacillu... 73 4e-12 UniRef50_Q648Q0 Putative uncharacterized protein n=1 Tax=uncultu... 72 5e-12 UniRef50_B6GDS2 Putative uncharacterized protein n=2 Tax=Collins... 71 1e-11 UniRef50_C7MMS9 Cytochrome c-type biogenesis protein CcmE n=3 Ta... 68 7e-11 UniRef50_Q8TIK0 Predicted protein n=2 Tax=Methanosarcina RepID=Q... 68 1e-10 UniRef50_D0MF46 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 65 6e-10 UniRef50_Q04V20 Cytochrome c-type biogenesis protein CcmE n=6 Ta... 65 8e-10 UniRef50_D0WG30 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 63 2e-09 UniRef50_C9KN72 Putative cytochrome c-type biogenesis protein Cc... 62 6e-09 UniRef50_Q2S0I5 Cytochrome c-type biogenesis protein CcmE, putat... 61 1e-08 UniRef50_C0GG62 Putative uncharacterized protein n=1 Tax=Dethiob... 61 1e-08 UniRef50_C9LX59 Putative cytochrome c-type biogenesis protein Cc... 59 6e-08 UniRef50_Q3IRX9 Cytochrome c-type biogenesis protein n=1 Tax=Nat... 58 1e-07 UniRef50_C4V0J0 Putative uncharacterized protein n=2 Tax=Selenom... 57 2e-07 UniRef50_Q5V2E7 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 56 4e-07 UniRef50_O28092 Uncharacterized protein AF_2191 n=1 Tax=Archaeog... 56 4e-07 UniRef50_UPI00006CB2D3 hypothetical protein TTHERM_00455200 n=1 ... 55 6e-07 UniRef50_B3QVM9 Cytochrome c-type biogenesis protein CcmE, putat... 55 7e-07 UniRef50_Q12WM0 Cytochrome c-type biogenesis protein n=1 Tax=Met... 55 8e-07 UniRef50_Q55DW5 Putative uncharacterized protein n=1 Tax=Dictyos... 55 8e-07 UniRef50_A9B1R7 Putative uncharacterized protein n=1 Tax=Herpeto... 53 3e-06 UniRef50_A0CI93 Chromosome undetermined scaffold_19, whole genom... 52 7e-06 UniRef50_A1HQT9 Putative uncharacterized protein n=1 Tax=Thermos... 52 7e-06 UniRef50_D2MJF3 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 51 9e-06 UniRef50_C7PPB0 Putative uncharacterized protein n=1 Tax=Chitino... 51 9e-06 UniRef50_D2UCX5 Putative uncharacterized protein n=1 Tax=Xanthom... 51 1e-05 UniRef50_A7NSA9 Putative uncharacterized protein n=6 Tax=Chlorof... 50 2e-05 UniRef50_C6Y3X0 Putative uncharacterized protein n=2 Tax=Pedobac... 50 3e-05 UniRef50_A3HVJ6 Cytochrome c-type biogenesis protein CcmE, putat... 49 6e-05 UniRef50_C6W7T7 Putative uncharacterized protein n=3 Tax=Flexiba... 47 2e-04 UniRef50_C2FWM8 Cytochrome c family biogenesis protein CcmE n=2 ... 47 2e-04 UniRef50_D2QN11 Putative uncharacterized protein n=1 Tax=Spiroso... 43 0.004 UniRef50_A8DJC8 DNA polymerase III alpha subunit n=1 Tax=Candida... 39 0.034 UniRef50_D2RHD0 Putative uncharacterized protein n=1 Tax=Archaeo... 39 0.035 >UniRef50_A7FGJ2 Cytochrome c-type biogenesis protein ccmE n=135 Tax=Gammaproteobacteria RepID=CCME_YERP3 Length = 164 Score = 217 bits (553), Expect = 9e-56, Method: Composition-based stats. Identities = 106/155 (68%), Positives = 127/155 (81%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RRK+RL++A VL G++LT LVLYALRSNIDLFYTPGEIL GK E + P +GQRL Sbjct: 1 MNPRRKSRLYLAMVVLIGISLTTTLVLYALRSNIDLFYTPGEILQGKGERHEKPAIGQRL 60 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMVMPGSVQRD +L+++F +YDA G+V V+Y GILPDLFREGQGVV QG +GN Sbjct: 61 RIGGMVMPGSVQRDAKTLEMSFQVYDARGAVTVTYTGILPDLFREGQGVVAQGVFAEGNT 120 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYK 155 + AKEVLAKHDE YTPPEVE+AM+ NH RPA+ Y+ Sbjct: 121 VHAKEVLAKHDEKYTPPEVEEAMKENHSRPAAAYR 155 >UniRef50_A3N216 Cytochrome c-type biogenesis protein ccmE n=93 Tax=Proteobacteria RepID=CCME_ACTP2 Length = 181 Score = 198 bits (504), Expect = 5e-50, Method: Composition-based stats. Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 1/157 (0%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRE-TQQMPEVGQR 59 MN RRK+RL + +++ G+A+ GL+LYAL NIDLFYTP EI+ GK + Q PEVGQR Sbjct: 1 MNPRRKSRLKVVVSIIFGVAVAAGLMLYALSQNIDLFYTPSEIVNGKNDDPDQKPEVGQR 60 Query: 60 LRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 +RVGGMV+ GSV+RD +LKV F D S+ V YEGILPDLFREGQG+V QG L + Sbjct: 61 IRVGGMVVEGSVKRDDKTLKVEFEANDIGPSITVEYEGILPDLFREGQGIVAQGVLIEPT 120 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKD 156 + A EVLAKHDENY PPE+ ++ H D Sbjct: 121 RLKATEVLAKHDENYMPPELGDKLKEQHGAAGISEAD 157 >UniRef50_A6V817 Cytochrome c-type biogenesis protein ccmE n=80 Tax=Bacteria RepID=CCME_PSEA7 Length = 162 Score = 194 bits (494), Expect = 7e-49, Method: Composition-based stats. Identities = 73/148 (49%), Positives = 95/148 (64%), Gaps = 6/148 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RK RL I A+L G+ +GL L AL+ NI+LFYTP +I G+ T R+ Sbjct: 1 MNPVRKKRLIIVLAILVGVGAAVGLALSALQQNINLFYTPTQIANGEAPTDT------RI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R GG+V GS+QR +SL V F + D V ++Y GILPDLFREGQG+V G+L Sbjct: 55 RAGGLVEKGSLQRSADSLNVRFVVTDGAKEVTIAYHGILPDLFREGQGIVALGKLGGDGV 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHR 148 ++A EVLAKHDENY PPEV KA++ + + Sbjct: 115 LVADEVLAKHDENYMPPEVTKALKDSGQ 142 >UniRef50_Q1ZIX0 Cytochrome c-type biogenesis protein CcmE n=4 Tax=Gammaproteobacteria RepID=Q1ZIX0_9GAMM Length = 158 Score = 193 bits (490), Expect = 2e-48, Method: Composition-based stats. Identities = 87/148 (58%), Positives = 110/148 (74%), Gaps = 1/148 (0%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RRK RL I A++ GL+L++GLVL+AL+ NIDLFYTP EI+ GK ET + P++GQRL Sbjct: 1 MNPRRKKRLIITSALVIGLSLSVGLVLFALQQNIDLFYTPTEIVKGKNETGEKPQIGQRL 60 Query: 61 RVGGMVMPGSVQRDPNSLKVTFT-IYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 R+GGMV+ GSV+RD SLKV+F I D V + ++GILPDLFREGQG+V QG L Sbjct: 61 RIGGMVVNGSVKRDQTSLKVSFDLIDDGGERVTIFFDGILPDLFREGQGIVAQGVLLNAT 120 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANH 147 I A EVLAKHDE Y PPEV++A++ Sbjct: 121 QINAFEVLAKHDEEYMPPEVQEAIKGMK 148 >UniRef50_C6N3B8 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Legionella RepID=C6N3B8_9GAMM Length = 164 Score = 188 bits (477), Expect = 7e-47, Method: Composition-based stats. Identities = 70/143 (48%), Positives = 86/143 (60%), Gaps = 6/143 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RK ++ I + LA L++ GLVLYALR NI LFYTP ++ G+ Q + Sbjct: 22 MNPARKRKILILLSALAVLSIAAGLVLYALRQNISLFYTPTQVAEGQAPLQHA------I 75 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV GS R L V F + D +V V + GILPDLFREGQGVVV+G L Sbjct: 76 RIGGMVEKGSFIRASKGLDVEFKVTDFTKTVTVLHTGILPDLFREGQGVVVEGRLLDNQR 135 Query: 121 ILAKEVLAKHDENYTPPEVEKAM 143 A VLAKHD NY PPEV+ A+ Sbjct: 136 FQATRVLAKHDANYMPPEVKAAL 158 >UniRef50_A9W2K2 Cytochrome c-type biogenesis protein ccmE n=28 Tax=Proteobacteria RepID=CCME_METEP Length = 177 Score = 186 bits (472), Expect = 2e-46, Method: Composition-based stats. Identities = 66/153 (43%), Positives = 87/153 (56%), Gaps = 7/153 (4%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+ RL + A A LAL +GL+L A+ +I F +P E+ Q G R R+G Sbjct: 3 RKSRRLILIAACGAVLALALGLILSAMSGSIVFFRSPAEV------AAQGVPPGTRFRLG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSV+R P+ V F + D +V V Y G+LPDLFREGQG+V +G L+ G A Sbjct: 57 GLVKDGSVKRGPD-QNVEFAVTDTNATVPVQYRGLLPDLFREGQGIVAEGTLDVGGVFRA 115 Query: 124 KEVLAKHDENYTPPEVEKAMEANHRRPASVYKD 156 VLAKHDENY P EV A++A R K+ Sbjct: 116 DTVLAKHDENYMPREVADALKAQGRWQEGGSKE 148 >UniRef50_Q46RW7 Cytochrome c-type biogenesis protein ccmE n=10 Tax=Proteobacteria RepID=CCME_RALEJ Length = 159 Score = 183 bits (464), Expect = 2e-45, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 7/148 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R+ RL + A LA + + LVL A RSN+ F++P ++ + Sbjct: 1 MTPRQ-RRLGMLLAALACAGIALALVLNAFRSNLVFFFSPSQV------AAHEAPASRSF 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V PGS++R+ + + V F + D V V Y G+LPDLFREG+GVV +G L++ Sbjct: 54 RLGGLVAPGSIRREGDGMTVRFIVTDKAREVPVVYRGLLPDLFREGKGVVARGTLDRSGT 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHR 148 +A EVLAKHDENY PPE A++ + Sbjct: 114 FVASEVLAKHDENYMPPEAADALKQAEQ 141 >UniRef50_Q69AY8 Cytochrome c-type biogenesis protein ccmE n=27 Tax=cellular organisms RepID=CCME_GLUDA Length = 173 Score = 182 bits (463), Expect = 2e-45, Method: Composition-based stats. Identities = 62/156 (39%), Positives = 81/156 (51%), Gaps = 8/156 (5%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+ RLW+ A L GL LVL A SNI F P ++ P + +R+G Sbjct: 3 RKSRRLWLVGACLLGLGTATALVLNAFSSNIVFFMAPSQV------RAHPPAADRTIRLG 56 Query: 64 GMVMPGSVQRD--PNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 GMV+ GSV+R ++ F + D + +V V Y GILPDLFREGQ VV G + Sbjct: 57 GMVVAGSVRRQTQGDTPIALFDVTDGQAAVTVRYAGILPDLFREGQSVVAVGTVAPDGAF 116 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDP 157 A EVLAKHDE Y P EV +A+ + + K P Sbjct: 117 RASEVLAKHDETYMPKEVAEALRRSGKWDPRYGKAP 152 >UniRef50_D0J750 Cytochrome C-type biogenesis protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J750_COMTE Length = 170 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 67/159 (42%), Positives = 91/159 (57%), Gaps = 7/159 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R++ LW A LA +A + LVL AL SN+ FY+P ++ G+ G Sbjct: 1 MKPRQRRLLW-VLAGLALVAAAVTLVLRALNSNVMFFYSPSQVHAGEV------PHGAAF 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V PGS+QR + + + F + D SV V Y G+LPDLFREG+GVVV G ++ Sbjct: 54 RLGGLVEPGSLQRSGDGMLLRFAVTDEVRSVPVQYRGLLPDLFREGKGVVVSGRMQADGA 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS 159 A EVLAKHDENY PPE A++ +P D A+ Sbjct: 114 FQASEVLAKHDENYMPPEAAHALKNAAGKPPEKSADDAT 152 >UniRef50_C6P0C2 CcmE/CycJ protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0C2_9PROT Length = 164 Score = 181 bits (459), Expect = 7e-45, Method: Composition-based stats. Identities = 63/138 (45%), Positives = 90/138 (65%), Gaps = 7/138 (5%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R+K RLW L + +GLVL+AL++N+ L++TP ++ + + Sbjct: 1 MTPRKK-RLWFIVGGLVLVGAAVGLVLFALKNNVSLYFTPTQVYNKEA------PQNRSF 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GS++R+ + L V F I D ++ V Y+GILPDLF+EG+GVV QG+LE+GN Sbjct: 54 RIGGLVESGSLKRENDGLTVHFNITDTFKTMAVVYKGILPDLFKEGKGVVAQGKLEEGNV 113 Query: 121 ILAKEVLAKHDENYTPPE 138 A+EVLAKHDENY PPE Sbjct: 114 FHAEEVLAKHDENYMPPE 131 >UniRef50_Q2RYF4 Cytochrome c-type biogenesis protein ccmE n=7 Tax=Bacteria RepID=CCME_RHORT Length = 153 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 84/145 (57%), Gaps = 8/145 (5%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+K RL+ + L GL L A + N+ FY+P ++ + G+R RVG Sbjct: 3 RKKRRLYFVVLGMLALFAAAGLTLTAFQDNLVFFYSPTDLQEKGVDQ------GRRFRVG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSV RD V F + D +V V Y G+LPDLFREGQGVV +G ++ +A Sbjct: 57 GLVEEGSVVRDGE--TVRFIVTDLMNTVTVRYTGMLPDLFREGQGVVAEGAMDGAGTFVA 114 Query: 124 KEVLAKHDENYTPPEVEKAMEANHR 148 VLAKHDENY PPEV ++++A+ + Sbjct: 115 ASVLAKHDENYMPPEVAESLKASGK 139 >UniRef50_A4YRM0 Cytochrome c-type biogenesis protein ccmE n=28 Tax=Alphaproteobacteria RepID=CCME_BRASO Length = 171 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 66/161 (40%), Positives = 88/161 (54%), Gaps = 13/161 (8%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R++ RL I L LA+ GLVL ALR +I F TP + ++ G+R R+G Sbjct: 3 RKQRRLTIIGGALFVLAVAAGLVLNALRDSIVFFSTPTMV------AEKHVAPGKRFRLG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V PGS++R + L VTF + D + V+Y+GILPDLFREGQGVV +G L+ A Sbjct: 57 GLVQPGSLKRGDD-LAVTFEVADGGAKLPVAYKGILPDLFREGQGVVAEGALDASGVFKA 115 Query: 124 KEVLAKHDENYTPPEVEKAMEANH------RRPASVYKDPA 158 VLAKHDE Y P EV ++ +P K A Sbjct: 116 DTVLAKHDETYMPKEVADTLKKQGHWKDDYGKPQGAAKPGA 156 >UniRef50_C5S795 CcmE/CycJ protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S795_CHRVI Length = 160 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 7/147 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R+K RL + G+ L + AL+SN+ F++P +++ + + Sbjct: 1 MKARQK-RLVFVGLAILGIGAASTLAITALKSNLSYFFSPSQVIAKEAPADHV------F 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GS+QR L V F + D +V V+YEGILPDLF+EG GVV +G L Sbjct: 54 RLGGLVTEGSLQRQGEGLTVYFDVTDNASTVKVAYEGILPDLFKEGSGVVAKGRLRPDGV 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANH 147 A+EVLAKHDE Y PPEV ++ H Sbjct: 114 FQAEEVLAKHDEEYMPPEVASTLQTAH 140 >UniRef50_C7RAW0 CcmE/CycJ protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAW0_KANKD Length = 163 Score = 178 bits (451), Expect = 7e-44, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 6/151 (3%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + R+N+L + L L+ + L+LYAL NI+ FY P E+ G + + + Sbjct: 1 MKVHRRNKLIAIISGLVLLSGAVALILYALTENINHFYAPTEVKEGNA------PLNKTI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGG+V+PGS++R L V F I D + + +SY+ ILPD+F+EGQGV+ +G+L + N Sbjct: 55 RVGGLVVPGSIERSGERLYVEFKITDNQSQMVISYDNILPDMFKEGQGVIAEGQLVEKNK 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPA 151 ++A +VLAKHDE Y PPEVE +++ Sbjct: 115 LVASKVLAKHDETYMPPEVEASLQKYGHPMQ 145 >UniRef50_A5WHG7 Cytochrome c-type biogenesis protein ccmE n=5 Tax=Gammaproteobacteria RepID=CCME_PSYWF Length = 175 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 8/152 (5%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN R+ +L A LAG + + LV+YA+ D ++ P I G +R+ Sbjct: 1 MNAVRRKKLIWVAATLAGAIIAVLLVIYAIGQQTDYYFDPTAIAAGDA------PQNKRI 54 Query: 61 RVGGMVMPGSVQRDP-NSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 R GGMV+ SV+RDP + LKV F I D +V VSY+GILPDLF E GVV GE++ G Sbjct: 55 RAGGMVVKDSVRRDPNDDLKVQFEITDFNATVPVSYQGILPDLFAENSGVVATGEMQ-GK 113 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANHRRPA 151 +A EVLAKHDENY PPEV +++ +H Sbjct: 114 VFVASEVLAKHDENYMPPEVAASLKEDHAAKG 145 >UniRef50_Q21JJ9 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Gammaproteobacteria RepID=CCME_SACD2 Length = 157 Score = 172 bits (436), Expect = 3e-42, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 94/146 (64%), Gaps = 6/146 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ RK RL ++ ++ +GL+++AL N++LFY P +I+ G+ G + Sbjct: 1 MHPVRKQRLMTVLFIVIASSVAVGLMVFALSKNLNLFYPPSQIVSGEA------PRGPTI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R GG V+PGSV+R +SLKV F+I D + SV V YEG+LPDLF EG+ VV G++ + Sbjct: 55 RGGGCVVPGSVERASDSLKVAFSITDGKESVLVRYEGLLPDLFDEGEAAVVTGKVTQEGV 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEAN 146 A EVLAKHDE YTPPEVE AM+ + Sbjct: 115 FEAVEVLAKHDETYTPPEVENAMKES 140 >UniRef50_A6X2C8 Cytochrome c-type biogenesis protein ccmE n=37 Tax=Brucellaceae RepID=CCME_OCHA4 Length = 165 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 8/142 (5%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R++ RL++ LA LA+ +GL+L A +I F TP ++ T+Q G R R+G Sbjct: 25 RKRKRLFLIGGALAVLAVAVGLMLMAFSQDIRFFRTPADL------TEQDMASGSRFRLG 78 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSV R ++ FT+ D +V V +EGI PDLFREGQGVV +G A Sbjct: 79 GLVEEGSVSR--EGSELRFTVTDTIKTVKVVFEGIPPDLFREGQGVVAEGRFGDDGVFRA 136 Query: 124 KEVLAKHDENYTPPEVEKAMEA 145 VLAKHDENY P ++ +++ Sbjct: 137 DNVLAKHDENYVPKDLADSLKE 158 >UniRef50_Q3BSK6 Cytochrome c-type biogenesis protein ccmE 2 n=19 Tax=Xanthomonas RepID=CCME2_XANC5 Length = 156 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 86/149 (57%), Gaps = 7/149 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN +R+ RLW+ A++ L LV AL+ N+ YTP E+L G R Sbjct: 1 MNPQRRRRLWLVLALVLAGGLATTLVAMALQRNVAYLYTPSEVLRGDAGAHS------RF 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV GS +R +L+ F + D + + VSY+ ILPDLFREGQ VV G ++ G Sbjct: 55 RLGGMVEKGSFKRASGALEAQFRVTDGDAQLPVSYDRILPDLFREGQAVVATGRMQNG-I 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRR 149 +A++VLAKHDE Y P EV M + HR+ Sbjct: 114 FVAEDVLAKHDETYMPKEVADKMGSAHRK 142 >UniRef50_Q478K9 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Betaproteobacteria RepID=CCME_DECAR Length = 153 Score = 172 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 78/134 (58%), Gaps = 6/134 (4%) Query: 26 VLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIY 85 VL AL SNI L+ +P ++ GK G+ R+GG+V GS+QR + + + F + Sbjct: 25 VLNALNSNIALYISPTDVAEGKA------PQGKAFRIGGLVKEGSLQRQADGVTIAFVVT 78 Query: 86 DAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEA 145 D + V Y+GILPDLF+EG+GVV QG++ A EVLAKHDENY PPE KA+ Sbjct: 79 DTAKDMTVHYKGILPDLFKEGKGVVAQGKMAADGTFTASEVLAKHDENYMPPEAAKAVGD 138 Query: 146 NHRRPASVYKDPAS 159 + A K AS Sbjct: 139 AQAKSAGAEKPKAS 152 >UniRef50_B8H1L5 Cytochrome c-type biogenesis protein ccmE n=4 Tax=Caulobacteraceae RepID=CCME_CAUCN Length = 162 Score = 171 bits (434), Expect = 6e-42, Method: Composition-based stats. Identities = 64/156 (41%), Positives = 84/156 (53%), Gaps = 7/156 (4%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 + + RL I A+ LAL +GL LY LR +I LFYTP + K G+++++ Sbjct: 8 RKARRRLTILLAIAPVLALAVGLALYGLRDSISLFYTPAQAQEAKVSA------GRKVQL 61 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GG+V GSV + P+ V F I D + + V Y G LPDLFREGQG+V +G Sbjct: 62 GGLVQHGSVVKYPDG-NVEFVIADQKATAKVVYHGDLPDLFREGQGIVAEGSFNPAGVFE 120 Query: 123 AKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPA 158 AK VLAKHDE Y P EV KA++ PA Sbjct: 121 AKLVLAKHDERYMPREVSKALKEQGEWRGEGADAPA 156 >UniRef50_D0Y445 CcmE/CycJ protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y445_9CAUL Length = 202 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 62/156 (39%), Positives = 88/156 (56%), Gaps = 7/156 (4%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 + + RL I AV LAL +GL LY +R +I LFYTP + +E P G+++++ Sbjct: 13 RKARRRLTILLAVAPVLALAVGLALYGMRDSISLFYTPAQA----QEAHVKP--GRKVQL 66 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GG+V GSV + + V F + D + + + Y G LPDLFREGQG+V +G + + Sbjct: 67 GGLVQHGSVVKHADG-NVEFVVADQKATAKIVYHGDLPDLFREGQGIVAEGTFNEQGVFV 125 Query: 123 AKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPA 158 AK+VLAKHDE Y P EV KA++ PA Sbjct: 126 AKQVLAKHDERYMPREVSKALKEQGEWRGEGAGAPA 161 >UniRef50_B6IVR1 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Rhodospirillum centenum SW RepID=CCME_RHOCS Length = 168 Score = 170 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 60/143 (41%), Positives = 86/143 (60%), Gaps = 7/143 (4%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+K RL++ L GL L L A NI FY+P +++ P + +R+G Sbjct: 3 RKKRRLYMLGLALLGLGTATALTLSAFEENIVFFYSPSDLVVQ-------PPGDRSVRLG 55 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V GSVQ+ + L +TF + D +V V+Y+GI+PDLFREGQGVV +G + +A Sbjct: 56 GLVEDGSVQKQADGLTITFRVTDTANTVPVTYKGIVPDLFREGQGVVAEGRMGGDGVFVA 115 Query: 124 KEVLAKHDENYTPPEVEKAMEAN 146 +EVLA+HDENY PPEV A++ Sbjct: 116 REVLARHDENYMPPEVHDALQRA 138 >UniRef50_A5CWG8 Cytochrome c-type biogenesis protein ccmE n=5 Tax=Gammaproteobacteria RepID=CCME_VESOH Length = 140 Score = 166 bits (420), Expect = 2e-40, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 9/146 (6%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 +R+NR+ + ++ G++L L L A N+ F +P ++ G+ + R+G Sbjct: 3 KRQNRMVLVALLVIGVSLAGYLGLKAFNENLLYFLSPTDVTKGRA------PKDKDFRLG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 GM++ S++ + +KV F + D + V+Y GILPDLF+EGQGV+ G L +A Sbjct: 57 GMIVKDSIKH--DGIKVVFDVTDYSNTFRVNYSGILPDLFKEGQGVITTGSLV-DGVFMA 113 Query: 124 KEVLAKHDENYTPPEVEKAMEANHRR 149 EVLAKHDENY PPEV A+E + Sbjct: 114 TEVLAKHDENYMPPEVADALEKAKNK 139 >UniRef50_Q0AR54 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Hyphomonadaceae RepID=CCME_MARMM Length = 158 Score = 165 bits (418), Expect = 4e-40, Method: Composition-based stats. Identities = 63/159 (39%), Positives = 81/159 (50%), Gaps = 7/159 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R RL A L + +GL L ALRS + FY+P EI + P + R+ Sbjct: 1 MMRHRNRRLATIAASAIVLVVAVGLGLMALRSAVVFFYSPSEI------AAEHPGIEARI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGG+V+ SV + F I D +V V Y G+LPDLFREGQGVVV+G Sbjct: 55 RVGGLVLEESVGEAASGAT-RFVITDRVENVQVEYAGLLPDLFREGQGVVVEGRFAADGV 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS 159 + A+ VLAKHDE Y PPEV +A+ A+ Sbjct: 114 LQARTVLAKHDETYMPPEVAEALREAGVWQGEGETPSAA 152 >UniRef50_A0LDE3 CcmE/CycJ protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDE3_MAGSM Length = 156 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 7/152 (4%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R RL + ++ + LV + + F+TP E++ E VG+++R+GG Sbjct: 10 RNKRLLLIATLVLVGGALLTLVFQSFSGAMVYFHTPTEVMQKTVEL-----VGKKVRIGG 64 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 MV GS+ R +L++TF + D E + V Y+G+ PDLFREGQGVVV+GE +A Sbjct: 65 MVQAGSLSRKEGTLEITFDVTDGETPISVYYKGVTPDLFREGQGVVVEGEWLNTKPFIAH 124 Query: 125 EVLAKHDENYTPPEVEKAMEANHRRPASVYKD 156 +LAKH E+Y P VE EA + ++ K Sbjct: 125 TILAKHSEDYMP--VEMNAEAIQKSRENILKS 154 >UniRef50_Q87BH5 Cytochrome c-type biogenesis protein ccmE n=7 Tax=Xylella fastidiosa RepID=CCME_XYLFT Length = 153 Score = 162 bits (410), Expect = 3e-39, Method: Composition-based stats. Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 9/144 (6%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RR RLW ++ + L + ALR N+ Y P E+L G Q Sbjct: 1 MNARR--RLWSVLMLILAVGTAATLTIMALRHNLTYLYMPSEVLRGDTAQQT------HF 52 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GS QR +L F + D + V Y ILPDLFREGQ +V G+++ G Sbjct: 53 RLGGIVEKGSFQRTSGTLNTRFIVTDGNARLQVRYARILPDLFREGQAIVATGQMQHG-T 111 Query: 121 ILAKEVLAKHDENYTPPEVEKAME 144 +A+ +LA+H+E YTP ++ M+ Sbjct: 112 FIAENILARHNETYTPRQLANKMQ 135 >UniRef50_Q96326 G1p n=8 Tax=Magnoliophyta RepID=Q96326_ARATH Length = 256 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 25/165 (15%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 + RLW + +A + +VL + + + TP + + E + R+GG Sbjct: 80 QNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYLTPSDAMEKFAEN----PTKNKFRLGG 135 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEK------- 117 +V+ GSV + S ++ F I D + V Y+G LPDLFREG VVV+G ++ Sbjct: 136 LVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDLFREGHSVVVEGFIKPYTDEVRK 195 Query: 118 --------------GNHILAKEVLAKHDENYTPPEVEKAMEANHR 148 A EVLAKHDE Y P EV A+E N + Sbjct: 196 EVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAAAIEKNKK 240 >UniRef50_Q0A805 Cytochrome c-type biogenesis protein ccmE n=18 Tax=Proteobacteria RepID=CCME_ALHEH Length = 158 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 88/148 (59%), Gaps = 7/148 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R RL + VL GL L+ GL L A + N+ F+TP E++ + + + + Sbjct: 1 MKPRH-RRLTLIALVLGGLGLSAGLALTAFQDNLVFFFTPSEVMAREA------PIDRPI 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GSV+R+ S +V F + D S+ VSY+GILPDLFREGQGVV QG L Sbjct: 54 RIGGLVKAGSVEREAASARVHFKVTDTAESITVSYDGILPDLFREGQGVVAQGRLGADGR 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHR 148 A +VLA+HDE Y P E ++A++ + Sbjct: 114 FHATQVLARHDETYMPAEAKEALDRIGQ 141 >UniRef50_D0RQU2 CcmE/CycJ protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQU2_9RICK Length = 147 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 8/146 (5%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN + K RL + + + +L N F++P E+ + + Sbjct: 1 MNNKTKQRLSFFLVSVIAFIIIGKFIYESLSKNTVYFFSPSELYISTELPNGL------I 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV GS+ + N + +F I D + + V+Y GI P+LF EGQG VV+G+L N Sbjct: 55 RIGGMVKKGSLIKAGN--RYSFIITDFKNDISVNYIGIKPNLFEEGQGAVVEGKLSTRNS 112 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEAN 146 ++A ++LAKHDENY P EV A++ + Sbjct: 113 LMASKILAKHDENYMPKEVADALKKS 138 >UniRef50_Q4FNY3 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Candidatus Pelagibacter RepID=CCME_PELUB Length = 139 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 86/146 (58%), Gaps = 9/146 (6%) Query: 1 MNIRR-KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQR 59 M ++ K R +LA + LT+ LVL +L+ N+ F +P EI + ++ Sbjct: 1 MYGKKVKLRFIFLALILASVILTVFLVLQSLKENVVYFQSPSEIKSLIELNK------KK 54 Query: 60 LRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 +RVGGMV S+ D + KV F I D + +++ Y G +P+LF EG+GVV +G L+ N Sbjct: 55 IRVGGMVKEQSIFIDSD--KVNFVITDFKNEINIVYTGAVPNLFAEGKGVVAEGFLKDKN 112 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEA 145 + A ++LAKHDENY PPEV++A+ Sbjct: 113 YFTATKILAKHDENYMPPEVKEALGD 138 >UniRef50_D2MJF2 CcmE/CycJ protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJF2_9BACT Length = 151 Score = 155 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 6/142 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M +K I +L G AL L L N+ F+TP E+ + Q +++ Sbjct: 1 MMPGKKKVGMIISILLVGGALA-YLALGNFGENVVYFFTPSEVKAFSTDYYQ-----KKV 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGGMV+ GS++ P+ L +TF + D E ++ V++EGI PDLF+EGQG VV+G + Sbjct: 55 RVGGMVVEGSMETYPDRLGLTFQLTDGEATIPVTFEGIPPDLFKEGQGAVVEGYWTGEHR 114 Query: 121 ILAKEVLAKHDENYTPPEVEKA 142 + ++AKH E+Y P E+++A Sbjct: 115 FESNLIMAKHSEDYMPIELKRA 136 >UniRef50_B9GW99 Predicted protein (Fragment) n=2 Tax=Embryophyta RepID=B9GW99_POPTR Length = 200 Score = 154 bits (390), Expect = 7e-37, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 25/165 (15%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 + RLW + +A I +VL + + + TP + + E + + R+GG Sbjct: 36 QNRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYITPSDAV----EKFKNNPSKNKFRLGG 91 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEK------- 117 +V+ GSV S ++ F + D + V YEG LPDLFREG VVV+G +++ Sbjct: 92 LVLEGSVVHPLTSPEMEFVVTDLITDILVKYEGSLPDLFREGHSVVVEGFMKELDDKVRK 151 Query: 118 --------------GNHILAKEVLAKHDENYTPPEVEKAMEANHR 148 + A +VLAKHDE Y P EV A+E N + Sbjct: 152 EVGLKNVSGKARSGECYFKAFDVLAKHDEKYMPQEVAAAIERNKK 196 >UniRef50_B0SVC7 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Caulobacteraceae RepID=CCME_CAUSK Length = 166 Score = 154 bits (390), Expect = 7e-37, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 7/144 (4%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 + + RL I +AL +GL L+ +R I LFYTP + G+++++ Sbjct: 8 RKARRRLTILAVAAPVVALAVGLALWGMRDAISLFYTP------AQAAAAHVPAGRKVQL 61 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GG+V GSV + P+ L V F + D + V Y+G LPDLFREGQG+V G ++ + Sbjct: 62 GGLVKAGSVVKHPDGL-VEFVVADQRSTALVHYKGDLPDLFREGQGIVASGAFDESGTFV 120 Query: 123 AKEVLAKHDENYTPPEVEKAMEAN 146 A +VLAKHDE Y P EV KA++ Sbjct: 121 ANQVLAKHDERYMPREVAKALKEQ 144 >UniRef50_Q2G8J0 Cytochrome c-type biogenesis protein ccmE n=7 Tax=Sphingomonadales RepID=CCME_NOVAD Length = 156 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 7/142 (4%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 + RL + L L L YAL + FY P +++ + PE G+ +R+GG Sbjct: 13 KHQRLVLLVIALVALIGAGLLAAYALSNQASYFYVPNDLV------KNPPEQGRAIRLGG 66 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 MV GS++ + + + F + D + V V Y GI PDLF EG GVV +G +E G +A Sbjct: 67 MVQKGSLKTRADGITIDFVVGDGKARVPVRYTGITPDLFVEGSGVVAEGRME-GQTFVAD 125 Query: 125 EVLAKHDENYTPPEVEKAMEAN 146 +LAKHDENY P ++ +A Sbjct: 126 NLLAKHDENYVPRQMGDMTKAQ 147 >UniRef50_Q5NN30 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Zymomonas mobilis RepID=CCME_ZYMMO Length = 146 Score = 151 bits (383), Expect = 4e-36, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 6/133 (4%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 + RL + LA + L L A + F+TP + + + +R+GG Sbjct: 4 KHQRLILGIIALAAVIAAGFLALVAFKKQAAYFFTPTDAVKAHL------PANRNIRLGG 57 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 MV GS+ R+ + + + F + D + VSY GI+PDLFREG GVV G + A+ Sbjct: 58 MVERGSLIREKDGVTIHFRVTDGYQKIAVSYRGIVPDLFREGSGVVADGHFDPSGSFTAE 117 Query: 125 EVLAKHDENYTPP 137 +LAKHDE Y PP Sbjct: 118 TILAKHDERYMPP 130 >UniRef50_A8PN63 CytoChrome c-type biogenesis protein CcmE (Cytochrome c maturationprotein E) (Heme chaperone ccmE) n=1 Tax=Rickettsiella grylli RepID=A8PN63_9COXI Length = 132 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 57/138 (41%), Positives = 83/138 (60%), Gaps = 8/138 (5%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN +K RL ++ + IGL +YAL+ NI+LFYTP +++ ++ GQ Sbjct: 1 MNGLQKKRLNFVVFLIVISLVVIGLSVYALKQNINLFYTPSQLV------REHLAQGQLF 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 +GG V G+V++ ++F + DA V V Y+G+LPDLFREGQ VV++G L+K Sbjct: 55 HLGGQVKKGTVKQHGEPGLISFVVSDASHQVLVEYQGVLPDLFREGQSVVIKGSLDKNGI 114 Query: 121 ILAKEVLAKHDENY--TP 136 + AK+VLAKHDE Y P Sbjct: 115 LQAKQVLAKHDERYQSMP 132 >UniRef50_A8LMF5 Cytochrome c-type biogenesis protein ccmE n=36 Tax=Rhodobacterales RepID=CCME_DINSH Length = 160 Score = 150 bits (379), Expect = 1e-35, Method: Composition-based stats. Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 13/154 (8%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 ++K R+ I L + ++ A+R I+ F +P E+ + P + R+G Sbjct: 5 KKKRRIQIIAIAAVALTIATIMIGTAMRDGINFFRSPSEV------AEAPPPESEVFRIG 58 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V G++ R S TF + D S+ VSY G+LPDLF E +G V G ++ G +A Sbjct: 59 GLVEEGTLVR-GESETTTFMVTDGGASIPVSYTGVLPDLFGENEGTVALGSMQNG-VFMA 116 Query: 124 KEVLAKHDENYTPPEVEKAMEANHRRPASVYKDP 157 EVLA+HDE Y P EV A++ VYKDP Sbjct: 117 TEVLARHDETYMPKEVVDALKEQ-----GVYKDP 145 >UniRef50_C8N960 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N960_9GAMM Length = 151 Score = 150 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 6/156 (3%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R RL + + A A + L+LYA++++++ +Y+ + +P + Sbjct: 1 MTPARTKRLTLISLIFAAFAAAVALLLYAMQNDLNHYYS-----LQSVAEKAVPLEQPGI 55 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGS-VDVSYEGILPDLFREGQGVVVQGELEKGN 119 RVGGMV S+ R+ +SL V F I D + + V+Y GILPDLFRE QGV+ +G L Sbjct: 56 RVGGMVEEHSLTREGDSLTVRFRITDFQHPPLAVTYTGILPDLFREKQGVIARGTLGADG 115 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYK 155 A E+LAKHDENY PPEV+ M+ + + S K Sbjct: 116 VFRADEILAKHDENYMPPEVQADMQRSGYQHQSQQK 151 >UniRef50_Q2GKI0 Cytochrome c-type biogenesis protein ccmE n=6 Tax=Anaplasma RepID=CCME_ANAPZ Length = 141 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 8/139 (5%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+ R+ L VL+ L +I F TP E++ ++ + P +RVG Sbjct: 3 RKHKRILFVAVSFIALGCVSAFVLFELSKSISFFCTPTELVADPIKSSRYP-----IRVG 57 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 GM++ GS+ R +S VTF+I D ++V+Y G+LP +F E G + +G +A Sbjct: 58 GMIVKGSIVRHGDS--VTFSITDLGTELEVTYRGVLPPMFGEDVGAIAKGRFV-DGVFIA 114 Query: 124 KEVLAKHDENYTPPEVEKA 142 +E+LAKHDE Y P + + Sbjct: 115 EELLAKHDEKYMPKKYSSS 133 >UniRef50_Q5LL36 Cytochrome c-type biogenesis protein ccmE 2 n=1 Tax=Ruegeria pomeroyi RepID=CCME2_SILPO Length = 139 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 9/138 (6%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 ++ R+ + L L+ YA+R I F TP E+ P + LR+G Sbjct: 5 KKSRRVRLILFSGVALVSATALIGYAMRDGIQFFRTPTEV------ATDPPAANEVLRIG 58 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 GMV GS+ RD + +F + D E S +SY GI+PDLFREG+G + G + G A Sbjct: 59 GMVEHGSLVRDGANF--SFRVTDGETSFPISYVGIVPDLFREGEGTIATGSVI-GGVFRA 115 Query: 124 KEVLAKHDENYTPPEVEK 141 E+LAKHDE Y P E+ + Sbjct: 116 TEILAKHDEVYMPSELAE 133 >UniRef50_C0R3Z7 Cytochrome c-type biogenesis protein ccmE n=6 Tax=Wolbachia RepID=CCME_WOLWR Length = 133 Score = 148 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 9/134 (6%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 ++ RL I + L+ + +L L+ NI FYT E + + + +RVG Sbjct: 3 KKHKRLLITSGIFCFLSCIVFFILTTLKENISFFYTVSEAIVLQNSQ-------KLIRVG 55 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 GMV+ SV R + +V F + D SV V Y+GILP +F E GVVVQG++ + LA Sbjct: 56 GMVVENSVIRSES--EVIFQMTDFNKSVVVKYQGILPPMFSEKSGVVVQGKMFDNSTFLA 113 Query: 124 KEVLAKHDENYTPP 137 V AKHDENY P Sbjct: 114 DTVFAKHDENYMPK 127 >UniRef50_Q5FHG0 Cytochrome c-type biogenesis protein ccmE n=5 Tax=canis group RepID=CCME_EHRRG Length = 134 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 80/137 (58%), Gaps = 9/137 (6%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 R+ RL++ L+ A ++ VL L++N+ FYTP E+L + +R+G Sbjct: 3 RKYRRLFVVIITLSIFAGSVVFVLGKLKNNVSFFYTPTELLSSSLINR------PNIRIG 56 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 GMV+ G+VQ+ +S + F I D + + V Y+GILP LF EG +V +G++ G +A Sbjct: 57 GMVVKGTVQKYDDS--IVFHITDLKNYIKVVYKGILPPLFSEGSWIVAKGKMVNGK-FIA 113 Query: 124 KEVLAKHDENYTPPEVE 140 E+LAKHDENY P + + Sbjct: 114 SEILAKHDENYMPNKYK 130 >UniRef50_A9IR17 Cytochrome c-type biogenesis protein ccmE n=5 Tax=Bartonella RepID=CCME_BART1 Length = 159 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 7/145 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 + R+K RL I +A+ LV+YA+R + F P EI T++ G+ L Sbjct: 16 LKQRKKKRLLIILLCCLVMAIAASLVVYAMRHAVSFFRMPSEI------TREDILTGRPL 69 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG V G+V+ S V F + D + V + G LPDLFREGQGV+V+G +K Sbjct: 70 RLGGFVEKGTVRYVGES-GVIFFVTDNKKHEKVVFNGALPDLFREGQGVIVEGHFDKQGF 128 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEA 145 + +LAKHD Y P E ++ Sbjct: 129 FIGTRILAKHDATYMPKETVDRLKK 153 >UniRef50_Q5SIG4 Cytochrome c-type biogenesis protein ccmE n=4 Tax=Thermaceae RepID=CCME_THET8 Length = 142 Score = 145 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 13/143 (9%) Query: 12 ACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSV 71 +L L +V L N+ F TP E L + Q P +R+GG+V PG+V Sbjct: 6 LLGILVILGALGYMVFGGLGRNLVYFLTPSEYLQDQARYQNRP-----VRLGGLVKPGTV 60 Query: 72 QRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHD 131 Q D + L++ F + D V V ++G P +F+EGQGVVV+G ++G +L KH Sbjct: 61 QYDKDRLELRFVLTDGVAEVPVFHKGTPPGMFKEGQGVVVEGRFQEG-VFQGTNLLVKHS 119 Query: 132 ENYTPP-------EVEKAMEANH 147 E Y PP EV K +E Sbjct: 120 ETYQPPKEGWTPEEVRKLIEEAQ 142 >UniRef50_B4SPY3 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Stenotrophomonas maltophilia RepID=CCME_STRM5 Length = 153 Score = 144 bits (364), Expect = 7e-34, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 74/149 (49%), Gaps = 7/149 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M ++ RL L L LV AL NI YTP E+L G + Q R Sbjct: 1 MTPVQRRRLVWVLLALLASGLATALVAMALERNIAYLYTPSEVLRGDVDAQS------RF 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV+ GS R SL+ F + D + + V+ ILPD+F EG VV G L+ Sbjct: 55 RLGGMVVKGSFNRPVGSLEARFEVTDGDAQLAVTTSRILPDMFAEGTAVVASGRLQ-DGI 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRR 149 +A EVLAKHDE Y P EV M HR+ Sbjct: 114 FVADEVLAKHDEKYVPKEVADKMGDAHRK 142 >UniRef50_B5J4A6 Cytochrome c-type biogenesis protein CcmE n=4 Tax=Rhodobacteraceae RepID=B5J4A6_9RHOB Length = 163 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 8/146 (5%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 N+++ R + +A ++ + F +P E++ + P+ + R Sbjct: 6 NLKKTRRKQVLVVSFVAIAGVFVILALLPNDSFQFFRSPTEVV------TEPPKETELFR 59 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GGMV GS+ R L+V+F + D V V++ ILP LF EGQG+V QG G Sbjct: 60 IGGMVQDGSIVR-GEGLEVSFIVTDCWNIVPVTFNDILPSLFEEGQGMVGQGHYING-TF 117 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANH 147 A E+LAKHDE Y P EV EA + Sbjct: 118 EAVEILAKHDETYMPAEVVNMQEAQN 143 >UniRef50_C6XIM0 CcmE/CycJ protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIM0_HIRBI Length = 155 Score = 143 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R R W+ L + LV+ AL N TP EI+ G T VG+R+R+GG Sbjct: 4 RSQRAWLIGVAGVLLVGAVALVMSALGDNASYSRTPTEIVTGNVVT-----VGERVRIGG 58 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 +V S++R P +L + F I D E V+V+Y+ + PDLF EGQG+V +G ++ + A Sbjct: 59 LVGVDSIERGPGTL-IKFEITDGEYGVNVAYDDLPPDLFEEGQGIVAEGIIQVDGSLQAT 117 Query: 125 EVLAKHDENYTPPEVEK 141 ++A+HDE+Y P E Sbjct: 118 RLVARHDESYMPKEAYD 134 >UniRef50_A8GWM8 Cytochrome c-type biogenesis protein ccmE n=15 Tax=Rickettsia RepID=CCME_RICB8 Length = 137 Score = 141 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 10/137 (7%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M KNRL + + ++LY L +I F P +I E G+ L Sbjct: 1 MQKGAKNRLITIIICFCSAVIGVSIILYNLEKSIVFFVPPSKI--------NEVEQGKEL 52 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGG+V S+ + K++F I D +++ Y+G+LP LFRE QG++ G L G Sbjct: 53 RVGGLVKVDSINKIAAD-KISFVITDNIKDLEIFYQGVLPALFRENQGIIAIGRLSNGK- 110 Query: 121 ILAKEVLAKHDENYTPP 137 +A+E+LAKHDENY PP Sbjct: 111 FIARELLAKHDENYRPP 127 >UniRef50_Q1IYZ2 CcmE/CycJ protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IYZ2_DEIGD Length = 155 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 12/144 (8%) Query: 11 IACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGS 70 + VLA + LT + L +++ F TP E L + E + G+ LR+GG+V Sbjct: 20 VVLGVLALVGLTAFIAFGNLGKSLEYFVTPTEYLQERAELE-----GRPLRIGGLVKD-- 72 Query: 71 VQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKH 130 VQ +P +L + F + D + V Y G + DLF+E QGVVV+G + GN A E++ KH Sbjct: 73 VQYNPQTLDLKFNVTDGGATFPVQYHGAVSDLFKENQGVVVRGTFQ-GNTFHATELVVKH 131 Query: 131 DENYTPPE----VEKAMEANHRRP 150 E Y P+ +++ ++ N +P Sbjct: 132 SEEYQVPKTQADLKRLLQENQSQP 155 >UniRef50_C1D1H5 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Deinococcus deserti VCD115 RepID=CCME_DEIDV Length = 158 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 8/143 (5%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 R++N L + A L L + L +++ F TP E + + G+ +R+ Sbjct: 18 RRKRNPLPTVLGITALLGLAGFIAFGNLNKSLEYFVTPTEYQQQAAQLK-----GRPVRI 72 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GG+V V+ +P SL+++FT+ D S V Y G + DLF+E QGVVV+GE E G Sbjct: 73 GGLVKA--VKYNPQSLELSFTVTDGGASFPVRYRGAVSDLFKENQGVVVRGEFE-GQTFQ 129 Query: 123 AKEVLAKHDENYTPPEVEKAMEA 145 A+E++ KH E Y P+ + + Sbjct: 130 ARELIVKHSEQYDVPKTQAELRD 152 >UniRef50_B3CU35 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Orientia tsutsugamushi RepID=B3CU35_ORITI Length = 130 Score = 140 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 9/138 (6%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + +R I ++ ++ + L+L A NI FYTP IL +E + G+ Sbjct: 1 MYFKINSRFRIVFLLILSISCGVFLILRAFSQNIIFFYTPTVILSQSKEGVVVRVGGKVK 60 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 GS+ + + F I D + V ++GILP LF+EGQ VV +G + + Sbjct: 61 H-------GSINKISPNEN-KFIITDNTSELQVYFKGILPPLFKEGQEVVAKGYMNQK-L 111 Query: 121 ILAKEVLAKHDENYTPPE 138 +A ++LAKHDE Y PPE Sbjct: 112 FIADDLLAKHDERYMPPE 129 >UniRef50_A1SI32 CcmE/CycJ protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SI32_NOCSJ Length = 154 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 68/139 (48%), Gaps = 7/139 (5%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 R RL + V L + + L + + TP E++ G + E+ QR+R+ Sbjct: 21 RRGSTRLRVVVCVAIILGALGWIAVRGLTGSFVYYLTPTEVVSGGQA-----EISQRIRL 75 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GG V PGSV RD L FT+ D E S+ V G +P LFR GQGVV++G L Sbjct: 76 GGYVEPGSVTRDDQGLT--FTVSDGEESIRVVSTGSVPQLFRAGQGVVLEGALGADRLFH 133 Query: 123 AKEVLAKHDENYTPPEVEK 141 A +L KHD Y P+ K Sbjct: 134 ADTLLVKHDGEYRAPDPTK 152 >UniRef50_C1A6K1 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6K1_GEMAT Length = 151 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 11/151 (7%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R K + L L+ ++ + TP E+ + T V + Sbjct: 1 MKARNK----FLLGGVLVLGTAGYLMASSIDETATYYLTPSEL--AGKVTANPRFVQNGV 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 +VG V+ G++ R P ++TF + D + DV Y G++PD F +G VVV+G L+ Sbjct: 55 KVGARVVSGTIVRQPGGRELTFKMTDGAHTYDVHYRGLIPDTFTDGVDVVVEGRLDATGT 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPA 151 A +LAK Y E A E + P Sbjct: 115 FQATTLLAKCASRY-----ENAPEKYQQTPG 140 >UniRef50_D2VQC0 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VQC0_NAEGR Length = 309 Score = 131 bits (330), Expect = 6e-30, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 72/141 (51%), Gaps = 5/141 (3%) Query: 12 ACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSV 71 + ++ I +++ ++ + +P +++ +++ +++R+GG+V G++ Sbjct: 153 YSIIFTIASVVIYIIVETNNDRMNYYVSPSKVMDNRQDF----PPDRKIRIGGIVKEGTI 208 Query: 72 QRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHD 131 Q N+ F I D + +++ Y+G+LPDLF E + +G + + + +LAKHD Sbjct: 209 QHGENNFLTIFKITDLKYDIEIEYKGVLPDLFEENSTAICEGFMLGHSKLKCTNILAKHD 268 Query: 132 E-NYTPPEVEKAMEANHRRPA 151 + N PPE+ +E N R Sbjct: 269 QRNGMPPEIAYEVEKNRREME 289 >UniRef50_Q0C2L6 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=CCME_HYPNA Length = 141 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 6/137 (4%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R RL+ A + L +ALR N +LFYTP E+L K +P G+ ++VGG Sbjct: 4 RTRRLYTFGIAAALIVAAAALAFFALRENANLFYTP-EVLAEK----GLPREGREVKVGG 58 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAE-GSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 V PGS+ + FT+ D ++ VS+ G+ PDLFREGQGVV G A Sbjct: 59 WVEPGSLTYADGGATMRFTVIDNSPSTITVSFNGVAPDLFREGQGVVATGTFTPEGEFTA 118 Query: 124 KEVLAKHDENYTPPEVE 140 +++LAKHDENY P E++ Sbjct: 119 RQLLAKHDENYQPRELK 135 >UniRef50_Q2GCU8 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Neorickettsia RepID=CCME_NEOSM Length = 135 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 12/138 (8%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + R R W + + + L+L+ L +I FY P ++ ++ + + Sbjct: 1 MLLLRWKRFWFLSLGILLFSGVVSLMLFNLSESISFFYLPSDV-------ARVVASNREI 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 +VGG++ +D V F + D ++V YEGILP L ++G VVV E G Sbjct: 54 KVGGIIKAIKKSKDG----VRFLLSDGAAEIEVLYEGILPSLVQDGINVVVVARFE-GGL 108 Query: 121 ILAKEVLAKHDENYTPPE 138 +LAK VL KHDE Y PPE Sbjct: 109 LLAKRVLVKHDERYYPPE 126 >UniRef50_C1XMN8 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMN8_MEIRU Length = 145 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 14/132 (10%) Query: 24 GLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFT 83 L+ L N+ F TP E Q P +R+GG+V PG++ +P +L++ F Sbjct: 20 YLIFGGLGQNLVYFITPSEYFQQVDRYQNRP-----VRLGGLVKPGTLDYNPQTLELRFV 74 Query: 84 IYDAEGSVDVSYEGILPD-LFREGQGVVVQGELEKGNHILAKEVLAKHDENYT------- 135 + D + + G P LF E +GVVV+G E G +++ +L KH E Y Sbjct: 75 VTDGVKEIPIRSSGTTPPALFGENRGVVVEGRFE-GETFVSQNLLVKHSETYQAPKEGWT 133 Query: 136 PPEVEKAMEANH 147 P +V K +E Sbjct: 134 PEQVRKLIEETQ 145 >UniRef50_A3VRG5 Cytochrome c-type biogenesis transmembrane protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VRG5_9PROT Length = 158 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 7/116 (6%) Query: 31 RSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGS 90 FY P + + + +R+GG+V GS+ R V+FT+ D + Sbjct: 38 SRTQVYFYGPSALPSPQM------LGDREVRLGGLVEKGSLSR-GEGTTVSFTVSDGVAA 90 Query: 91 VDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEAN 146 V V ++G LP L EG GV+ QG L +A+ VLA+HDENY PEV A++A Sbjct: 91 VPVEFDGSLPALVAEGDGVIAQGTLNDQGIFIAETVLARHDENYMAPEVADALKAT 146 >UniRef50_Q1D7C0 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Cystobacterineae RepID=Q1D7C0_MYXXD Length = 158 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 9/153 (5%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ +NRL A+L A + + N+ +++P E+L Q + Sbjct: 1 MSPVARNRLIALGALLVAGAGLGFVAFGNIGENLVYYWSPSEML-----GQGDKAYSATI 55 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYD----AEGSVDVSYEGILPDLFREGQGVVVQGELE 116 R+GG+V GS+Q + + F + D SV V P +FR+ GVVV+G + Sbjct: 56 RLGGVVEAGSIQWNAEHTTLQFRVADDVKEGAPSVLVRATETPPQMFRDKIGVVVEGTYD 115 Query: 117 KGNHILAKEVLAKHDENYTPPEVEKAMEANHRR 149 K + ++ H Y P+ + Sbjct: 116 KSGVFSSNRLMVNHSNEYRAPKEGEDPRQWQET 148 >UniRef50_D1C3N4 CcmE/CycJ protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3N4_SPHTD Length = 150 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 7/133 (5%) Query: 12 ACAVLAGLALTIGLVLYAL--RSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPG 69 LAL +G ++Y + F T GE+ + Q G R+RVGG V+PG Sbjct: 23 ILVAGVVLALAVGFLIYNSMQGTAAAYFVTVGEL-----QAQADKVDGTRVRVGGDVVPG 77 Query: 70 SVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAK 129 S+Q + F + D ++DV Y ++PD+F + V+V+G KG A +L K Sbjct: 78 SIQMGGPGEPIRFQVTDGTHTMDVVYREVVPDIFSDHVQVIVEGTFHKGQEFQADTLLTK 137 Query: 130 HDENYTPPEVEKA 142 + + + Sbjct: 138 CPSRFEAAQPTDS 150 >UniRef50_Q9RXG6 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Deinococcus radiodurans RepID=CCME_DEIRA Length = 168 Score = 114 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%) Query: 11 IACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGS 70 + A A L L +VL SN+ + P E + G+ LR+GG+ Sbjct: 26 LLVAGAAVLGLIGYMVLGNANSNLVYYVLPSEYQQDTAK-----FAGKTLRMGGLAKD-- 78 Query: 71 VQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKH 130 V + ++L + F + D + + V Y+G +PD+FR VV++G++++G K +L KH Sbjct: 79 VVYNRDTLALKFNMTDGQVAYPVQYQGAVPDMFRNDAVVVMEGQMQQG-VFHGKSLLVKH 137 Query: 131 DENY 134 E Y Sbjct: 138 SEEY 141 >UniRef50_C7LS40 Cytochrome c-type biogenesis protein CcmE n=3 Tax=Desulfovibrionales RepID=C7LS40_DESBD Length = 153 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 16/153 (10%) Query: 6 KNRLWIACAVLAGLALTIGLVLYA-LRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 KN+ W+ + + +G +L++ L N F E L E R+ G Sbjct: 11 KNQKWVYLVAVLLVGAGVGYLLFSGLSQNSVYFLNVSEALAMPAEKLSQA------RLFG 64 Query: 65 MVMPGSVQRDPNSLKVTFTIYDA---EGSVDVSYEGILPDLFREGQGVVVQGELEKGN-H 120 MV ++ DP+++ V+F D ++ V Y G +PD F+ G V+++G Sbjct: 65 MVAEKDIEHDPSAMGVSFYALDKDDPGKAIRVHYRGAVPDTFKAGVEVILEGSFTADTRV 124 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASV 153 A +L K Y EK + R P S Sbjct: 125 FEATTLLTKCPSKY-----EKNEKGQMRPPGSA 152 >UniRef50_D1H5F6 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H5F6_VITVI Length = 162 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 1/93 (1%) Query: 58 QRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEK 117 QR ++P S +S + F + D + V Y+G LPDLFREG VVV+G ++ Sbjct: 54 QRGDYSHRLVPISRSNGAHSPDMEFVVTDLITDILVRYQGALPDLFREGHSVVVEGFVKP 113 Query: 118 GN-HILAKEVLAKHDENYTPPEVEKAMEANHRR 149 G+ + EVLAKHDE Y P EV +A+E N ++ Sbjct: 114 GDYYFSGIEVLAKHDEKYMPKEVAEAIERNKKK 146 >UniRef50_D1CC97 CcmE/CycJ protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CC97_THET1 Length = 146 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 11/131 (8%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R+ L + L A + LV+ +N + E+ Q G ++RV G Sbjct: 18 RRRNLGLLVVGLVAAAAILYLVVSNFSANTVYYLKVSEL--------QSSYHGGQVRVSG 69 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 V+PGS+ R + K++FT YD G + V Y+G++PD+F++ VVV+G + G A Sbjct: 70 KVLPGSISRQGD--KLSFTAYDGSGRMRVEYQGVVPDIFKDNADVVVEGTYD-GQVFHAH 126 Query: 125 EVLAKHDENYT 135 +LAK + Sbjct: 127 TLLAKCPSKFQ 137 >UniRef50_B9L1G4 Cytochrome c-type biogenesis protein CycJ n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1G4_THERP Length = 148 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 8/133 (6%) Query: 5 RKNRLWIACAVLA-GLALTIGLVLYA--LRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R+ RL + VLA +A +G ++Y + F T E+ E G+R+R Sbjct: 12 RRIRLDVRLLVLALVMAGAVGYLMYTGLQGTAASYFVTVSELQARASEVD-----GRRVR 66 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 VGG V+ GS+ R + F I D ++V Y G+LPD+F EG+ V+V+G G + Sbjct: 67 VGGDVVTGSIVRGGPGEPIHFRIGDGTSELEVVYSGVLPDIFAEGRHVIVEGLYRNGQPV 126 Query: 122 LAKEVLAKHDENY 134 A VL + + Sbjct: 127 QADSVLTQCPSRF 139 >UniRef50_C1SLI4 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLI4_9BACT Length = 134 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 9/134 (6%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 +++ + A V AG L++ S + E+L+ + + + +RV Sbjct: 1 MKKSWKFLFAAVVFAGAIG--YLLVSGFSSESVYYLEVSEVLHNPEKFNK-----KGMRV 53 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEG-SVDVSYEGILPDLFREGQGVVVQGELEKG-NH 120 G V+ G++ +D + F I D G ++ V Y GI+PD F+E V+++G ++ + Sbjct: 54 SGDVVTGTIVKDFKKQYLEFDIADTSGQAMKVIYNGIIPDTFKEDIQVIIEGRFDQDADV 113 Query: 121 ILAKEVLAKHDENY 134 A VL K Y Sbjct: 114 FNAATVLTKCPSKY 127 >UniRef50_B8D1Q8 Putative cytochrome c-type biogenesis protein CcmE n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1Q8_HALOH Length = 128 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 61/134 (45%), Gaps = 11/134 (8%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + K + L + + + ++ +YT E + + + Q L Sbjct: 1 MKTKTK----VIILTLIIVLVVSYTTYISFNNSATYYYTISE-------ARGLEGIRQHL 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+ G ++ SV+ P+ ++ FT+ D + ++ + Y G++PD F+ + V+V+G+ + + Sbjct: 50 RIKGNLIKDSVKWSPDLSELKFTLTDGQHNLKMIYSGVVPDNFKHSREVIVEGKFIENDV 109 Query: 121 ILAKEVLAKHDENY 134 +++ + Y Sbjct: 110 FRVTKLMLQCPSKY 123 >UniRef50_B8DNC7 Cytochrome c-type biogenesis protein CcmE n=10 Tax=Desulfovibrionales RepID=B8DNC7_DESVM Length = 140 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ + L++ L L LV N F E L E Q + Sbjct: 1 MSKKNGKSLYLVALALF-LGGVGYLVFSGFSQNSVYFLNVSEALAMPSEKL------QSI 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEG---SVDVSYEGILPDLFREGQGVVVQGELEK 117 R+ G V P + R + V F + D + +V V Y G +PD F+EG V+V+G + + Sbjct: 54 RMFGTVAPEGIARLDDGPGVRFLLEDKDNPGQTVRVMYRGAVPDTFKEGVEVIVEGGMPQ 113 Query: 118 GN---HILAKEVLAKHDENY 134 G AK ++ K Y Sbjct: 114 GGAASEFRAKTLMTKCPSKY 133 >UniRef50_A9GE04 Putative membrane protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GE04_SORC5 Length = 188 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 L + +L + + L L + ++L K + G+++RV G Sbjct: 39 SRSLGLLATLLVMVGALVALFLVGFKEAAVYATPVDQLLASKDKL-----AGRKVRVEGE 93 Query: 66 VMPGSVQRDPNSLKVTFTIYDAEGSVDVSY-EGILPDLFRE----GQGVVVQGELEKGNH 120 ++PG++ + + + F I+ + + V Y + ++PD FR+ G V V+G L +G Sbjct: 94 LVPGTLVKRDSPCEYRFQIHGTQAPLPVRYAQCVIPDTFRDVPSGGVQVTVEGTLSQGGD 153 Query: 121 ILAKEVLAKHDENYTP 136 A V+AK Y P Sbjct: 154 FEASLVMAKCTSKYDP 169 >UniRef50_Q01YS2 Cytochrome c-type biogenesis protein, CcmE-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YS2_SOLUE Length = 148 Score = 99.2 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 9/143 (6%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 K A ++ + + L ++ N + T E+ G R RVGG Sbjct: 2 KKYGKFAALIVVVIGTLVWLATAGMKENQTYYKTIVEL-----SQMGDRAYGARTRVGGD 56 Query: 66 VMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGI--LPDLFREGQGVVVQGELEKGNHILA 123 V GS+QR N +V F + + V+Y G LPD F++G + G+L+K A Sbjct: 57 VEAGSIQRVGN--QVQFVLVQDTTKLKVAYTGSDPLPDTFKDGAQALADGKLDKDGVFRA 114 Query: 124 KEVLAKHDENYTPPEVEKAMEAN 146 + AK Y + A N Sbjct: 115 ARIQAKCASKYEAKPGQLAPGKN 137 >UniRef50_Q1IP94 Cytochrome c-type biogenesis protein, CcmE-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP94_ACIBL Length = 153 Score = 98.4 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 11/142 (7%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSN--IDLFYTPGEILYGKRETQQMPEVGQ 58 M+ R+ + A A++ L L + R + T EI +T + Sbjct: 1 MSERKPSYTRFALAIVFVLVPIGYLAVTGARDKDIASYYKTIQEI-----QTMGPEVYEK 55 Query: 59 RLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEG--ILPDLFREGQGVVVQGELE 116 RLRV G V GS++R +V FT+ + +++VSY G PD F++ + +G++ Sbjct: 56 RLRVAGTVAEGSIKR--QGTRVEFTLEEQGKTLNVSYIGTEAPPDTFKDKSQALAEGKMG 113 Query: 117 KGNHILAKEVLAKHDENYTPPE 138 + A+++ AK Y P + Sbjct: 114 RDGVFHAQKIQAKCASKYAPKQ 135 >UniRef50_C7M2R0 CcmE/CycJ protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2R0_ACIFD Length = 162 Score = 96.9 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 13/144 (9%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYAL--RSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 RR R + VL L +V+ A+ +S ++ + T + L + GQ R Sbjct: 21 RRTRRRMLQSLVLFAAILVALVVVLAMGAKSALEYYLTVPQALAKRATL-----AGQTFR 75 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 + G+V+PGS+Q P V F + V G P LF+ VVVQG E G+ Sbjct: 76 MEGIVVPGSIQSTPEG--VDFALRYDRAVARVVEIGNPPQLFQPSIPVVVQGHFE-GSTF 132 Query: 122 LAKEVLAKHDENYT---PPEVEKA 142 ++ ++ KH +Y P + A Sbjct: 133 VSNLIMVKHTSSYVAAHPNRIADA 156 >UniRef50_Q311W9 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Desulfovibrionaceae RepID=Q311W9_DESDG Length = 137 Score = 95.7 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 ++ ++ A+L + L+ L N F E L + R Sbjct: 1 MPKKNSKTIYIAALLLFVGGVGYLLFSGLSQNSVYFLNVSEALAMPSGDL------KSAR 54 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEG---SVDVSYEGILPDLFREGQGVVVQGELEKG 118 + G V +QR L V F I D + ++ V Y+G +PD F+ G V+++G + Sbjct: 55 LFGTVKAEGLQRIDEGLGVRFQIEDKDNKTRTMWVEYKGAVPDTFKPGAEVIIEGGVAPQ 114 Query: 119 -NHILAKEVLAKHDENYT 135 A+ ++ K Y Sbjct: 115 TQMFAARTLMTKCPSKYQ 132 >UniRef50_C1F370 Putative cytochrome c-type biogenesis protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F370_ACIC5 Length = 171 Score = 90.7 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 9/128 (7%) Query: 11 IACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGS 70 +A A+L L L + A +SN + T E+ +T + LRV G V+PGS Sbjct: 10 VALAILVILGSIGYLAVSAEQSNKSYYVTIQEL-----QTMGNKAYTRHLRVSGQVVPGS 64 Query: 71 VQRDPNSLKVTFTIYDAEGSVDVSYEGI--LPDLFREGQGVVVQGELEKGNHILAKEVLA 128 ++R FT+Y+ + V Y G PD F+ + G + A E+ A Sbjct: 65 IER--QGPNANFTLYEQNRKLRVEYVGEEPPPDTFKGNAPALAVGTFGRDGVFHATELQA 122 Query: 129 KHDENYTP 136 K +Y P Sbjct: 123 KCASHYAP 130 >UniRef50_Q28QS7 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Jannaschia sp. CCS1 RepID=Q28QS7_JANSC Length = 90 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R GG+V ++ R S +TF + D G+V VSY GIL DL + QG++ GN Sbjct: 20 RNGGLVEERTLMRGEGS-TITFRVTDGCGAVPVSYNGILRDLIAKAQGMIGTRRFIDGN- 77 Query: 121 ILAKEVLAKHDEN 133 +A E+LA+HDE Sbjct: 78 CVATEILARHDET 90 >UniRef50_UPI0001C321C1 Cytochrome c-type biogenesis protein CcmE-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321C1 Length = 157 Score = 86.5 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 22/150 (14%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ RK R+ + A A + L L+ + + D T G++L R G+ Sbjct: 1 MDPSRKRRIRLVVAATAAMLLASALIYTSFSAGSDE-KTAGQLLESAR-------AGETY 52 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSV--DVSYEGILPDLFREGQGVVVQGELEKG 118 + G V P SV+R+ L F I D V V Y G++PD FREG+GV+++ +L++ Sbjct: 53 TLAGTVAPNSVRREDGVL--WFRILDPHREVSARVRYTGLVPDPFREGRGVMIKVQLDRN 110 Query: 119 N-------HILA--KEVLAKHDENYT-PPE 138 +A ++ K + PE Sbjct: 111 GLKSSHDTLFIAEKDSMVTKCPSKFQVAPE 140 >UniRef50_D1J8Y7 Putative cytochrome c-type biogenesis protein n=1 Tax=uncultured archaeon RepID=D1J8Y7_9ARCH Length = 123 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 7/124 (5%) Query: 11 IACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGS 70 + V + ++ L S ++ + T EI +G+ +++ + GS Sbjct: 6 VYIIVALLIVVSAILAFDTFSSYVNPYSTVSEI------AGDDSYIGREVQILANITKGS 59 Query: 71 VQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKH 130 ++ + + F I D E ++ V+Y G+ P F + Q VV G H+ A ++L K Sbjct: 60 IEWGDDGSLL-FNITDGEATIAVTYTGVPPQSFTDRQRVVAIGVPTTPYHMNATQLLVKC 118 Query: 131 DENY 134 Y Sbjct: 119 PSKY 122 >UniRef50_D0LV11 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LV11_HALO1 Length = 147 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 66/153 (43%), Gaps = 13/153 (8%) Query: 7 NRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMV 66 L +A + + L+ + + ++ + E++ + G+ L+V G V Sbjct: 3 KPLIKVILTIAVVVGGVSLIALSSQGDVQYYKMVDELMVEPGDYT-----GKTLKVHGYV 57 Query: 67 MPGSV--QRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN---HI 121 G++ + + K TF + + + V + G PD F++ VV +G L + N + Sbjct: 58 EAGTIDERIEDQQTKRTFILENKGQRLVVHHLGPKPDTFKDKSEVVAEGRLIQENGTYRL 117 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPASVY 154 A+E++AK Y E +A ++ +V+ Sbjct: 118 EAEELMAKCPSKY---EGAEANRNAGQQEPTVF 147 >UniRef50_A6GFN2 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFN2_9DELT Length = 123 Score = 76.9 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 6/117 (5%) Query: 18 GLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNS 77 LA LV + + + +++ + + + +V G V+ S+ R + Sbjct: 2 VLAAVAFLVFSSPDEGVLEYVYVDKVVASPDDYGE-----REFKVHGNVVEDSL-RQDEA 55 Query: 78 LKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENY 134 F I + V Y +LPD F EG VV+ G L+ G+ + +KE+ AK Y Sbjct: 56 GDYHFVIEYKGKRLKVVYTDLLPDTFMEGGEVVMTGRLKDGDTLHSKEMTAKCPSKY 112 >UniRef50_Q3ACB4 Putative cytochrome c-type biogenesis protein CcmE n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ACB4_CARHZ Length = 137 Score = 76.5 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN R K I + L + A S+ + ++ + V Q++ Sbjct: 1 MNQRTK----ILVGSGIIVIAIAFLFISAFASSGTSYSL--QVDEAVYKIVYENAVDQKM 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIY----DAEGSVDVSYEGILPDLFRE-GQGVVVQGEL 115 R+ G V+PGS+ + +L++ F + + + V Y + PD +VV+G+ Sbjct: 55 RIEGRVLPGSISWNAKALELKFIMIPIKGSEKTQLPVVYNDVKPDNLEHPEAQIVVEGKY 114 Query: 116 EKGNHILAKEVLAKHDENY 134 + G A +L K Y Sbjct: 115 D-GKVFQADTLLVKCPSKY 132 >UniRef50_C8S810 Putative uncharacterized protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S810_FERPL Length = 122 Score = 75.3 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 13/129 (10%) Query: 7 NRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMV 66 N + L ++ + L A +SNI + T E++ ++V G + Sbjct: 4 NVKLVIGVSLIVFSIALAL---AFKSNISPYMTVSEVVRKGEAYN--------VQVNGTI 52 Query: 67 MPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEV 126 +P S + P + F + D + + V Y G + + ++EG VV G+ K A+++ Sbjct: 53 VPDSTKYFPENNTRIFLLTDGKEVMKVIYTGAVSN-YQEGIPAVVIGDY-KDGVFYAEKL 110 Query: 127 LAKHDENYT 135 L K Y Sbjct: 111 LLKCPSKYQ 119 >UniRef50_A8VWW5 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWW5_9BACI Length = 146 Score = 72.6 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 42/94 (44%) Query: 41 GEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILP 100 E+ G+ L GM++ SV D +++++TF I + V + G+ P Sbjct: 32 SEMKIADINANMDTLEGRHLTTEGMLVHDSVGWDADAIELTFDIEYEGHVLSVFFNGVRP 91 Query: 101 DLFREGQGVVVQGELEKGNHILAKEVLAKHDENY 134 D F + ++V+G L + + A+ V + Y Sbjct: 92 DNFTDDVYIIVRGYLNEEGTLEAEAVQTRCPSTY 125 >UniRef50_Q648Q0 Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos37B2 RepID=Q648Q0_9ARCH Length = 131 Score = 72.2 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 14/134 (10%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ R++ +A + + G+ + T E+ +G+ + Sbjct: 1 MDRRQRAIFTLAIIAVVLVVGLWGIPFGNKQ------LTVSEL--------TDEHIGKLV 46 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RV G V G++ N + FT+ D+ V+VSY P EG V G L N Sbjct: 47 RVNGTVAVGTLHYIDNGSTILFTLTDSLKDVNVSYAEHQPPNLVEGNHAAVTGMLLPNNT 106 Query: 121 ILAKEVLAKHDENY 134 I A +++ K Y Sbjct: 107 ISANQIITKCPSKY 120 >UniRef50_B6GDS2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GDS2_9ACTN Length = 223 Score = 71.1 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 15/138 (10%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN + + RL + ++A L + + + + L + G++L G G+++ Sbjct: 1 MNKKAQRRLVVTGGIVAIAMLVVAAIAGSGGAASSL--SVGDLLAGG-------YTGKKV 51 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIY----DAEGSVDVSYEGILPDLFREGQGVVVQGELE 116 +V G V+ S+Q + S V F I D + V+Y+G LP F G + G +E Sbjct: 52 QVTGSVVADSIQSEGAS--VQFAITPEEGDGSQELLVTYDGALPATFGTGVVAICTGTVE 109 Query: 117 KGNHILAKEVLAKHDENY 134 + E++ K Y Sbjct: 110 DPLMLNCTEMVTKCPSKY 127 >UniRef50_C7MMS9 Cytochrome c-type biogenesis protein CcmE n=3 Tax=Coriobacteriaceae RepID=C7MMS9_CRYCD Length = 223 Score = 68.4 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 15/138 (10%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN + K RL + + + + + L A S T E QR+ Sbjct: 1 MNAKTKRRLVVVTGI-IVMVMVVVLAFVASSSTA---KTVS-----VDEAASGQVSNQRI 51 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEG----SVDVSYEGILPDLFREGQGVVVQGELE 116 +V G V+ S + FTIYD + ++ V+Y+G F + G++ Sbjct: 52 QVTGNVLKDS--YAIEGNTLAFTIYDPDNAEASTLPVTYDGAAASTFGNDVTAICTGKVG 109 Query: 117 KGNHILAKEVLAKHDENY 134 + A E++ K Y Sbjct: 110 DDGVLRATELVTKCPSKY 127 Score = 49.9 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 13/98 (13%) Query: 40 PGEILYGKRETQQMPEVG-------QRLRVGGMVMPGSVQRDPNSLKVTFTIYDA---EG 89 P + G VG + +RV G V+ GS ++ F + D Sbjct: 124 PSKYESGTSALTVSRLVGYDQGIVDKTVRVTGSVVAGS--QNAAGQGDRFVLADTDDPSQ 181 Query: 90 SVDVSYEGILPD-LFREGQGVVVQGELEKGNHILAKEV 126 ++ V Y+G D + +G VV+ G + A ++ Sbjct: 182 TISVIYDGAASDAMLADGSQVVLTGNVGSDGKFSATDI 219 >UniRef50_Q8TIK0 Predicted protein n=2 Tax=Methanosarcina RepID=Q8TIK0_METAC Length = 126 Score = 68.0 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 16/138 (11%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN ++K+ L +A L G+ + + + E+L + G+ + Sbjct: 1 MNKKKKSLLAVAFIAGVFLIGLYGV------DSSEGYLAVSELLSDPQGYT-----GKNV 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGS---VDVSYEGILPDLFREGQGVVVQGELEK 117 G+V GS+++ P +F + D + V+Y G LP EG+ V V G + Sbjct: 50 NAVGIVEAGSLEKAPGV--TSFELEDENDENLKIHVNYVGDLPSNLAEGKQVTVSGTMIS 107 Query: 118 GNHILAKEVLAKHDENYT 135 + A +++ YT Sbjct: 108 ESTFEANKIITGCPSKYT 125 >UniRef50_D0MF46 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MF46_RHOM4 Length = 146 Score = 65.3 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 18/156 (11%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 RL + L +V+ + + + E E VG Sbjct: 2 NKRLMKTIVGVVLLGGFFAMVMLSFGEKVGGYMNFEEAAASGSEAHV---------VGQW 52 Query: 66 VMPGSVQRDPNSLKVTFTIYDAEGSVD-VSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 V V+ DP TF + DA G+V V Y P F + + +VV G + +G+ A+ Sbjct: 53 VRERPVRYDPARNVFTFYMRDAAGTVRRVEYPNPKPANFEDAEQLVVMGRM-RGDVFHAR 111 Query: 125 EVLAKHDENY--TPPEVEKAMEANHRRPASVYKDPA 158 E+L K Y +A++ + P+ + PA Sbjct: 112 EILMKCPSKYNDM-----RALQQQSQPPSDAARMPA 142 >UniRef50_Q04V20 Cytochrome c-type biogenesis protein CcmE n=6 Tax=Leptospira RepID=Q04V20_LEPBJ Length = 131 Score = 64.9 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 16/136 (11%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MNI+ + A + L+L + ++ + E+ + Q L Sbjct: 1 MNIK-----FTVLAGIILLSLG-SIAYFSSKETSYTLLDASELAASPAKYQ-----DNLL 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEG--ILPDLFREGQGVVVQGELEKG 118 RV G V GSV R+ F + E + V + G +LPD F+EG V G K Sbjct: 50 RVRGFVKLGSVIREGK--TARFILEFNEKQIPVFFTGETLLPDAFKEGTRARVDG-YIKD 106 Query: 119 NHILAKEVLAKHDENY 134 +++ V AK Y Sbjct: 107 GVLVSDHVEAKCASKY 122 >UniRef50_D0WG30 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WG30_9ACTN Length = 282 Score = 63.4 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 51/141 (36%), Gaps = 18/141 (12%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN + K RL + V+ + L + L S T E VG R+ Sbjct: 57 MNTQAKRRLIVVTLVIVAV-LAVILAYIGSSSAA---KTVS-----VAEAADGSLVGTRV 107 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYD----AEGSVDVSYEGILPDLFREGQGVVVQGELE 116 V G V+ S D L F IYD +V VSY+G F G + GEL Sbjct: 108 EVTGSVVDNSYSIDNGVL--AFDIYDADANDGATVHVSYDGSAASTFGNGVQAICTGELT 165 Query: 117 KGN---HILAKEVLAKHDENY 134 ++ E++ K Y Sbjct: 166 DEGGTPTVVCTELVTKCPSKY 186 Score = 40.3 bits (93), Expect = 0.023, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 5/94 (5%) Query: 37 FYTPGEILYGKR-ETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYD---AEGSVD 92 + E L R + + + + ++V G+V PG++++ S + F++ D V Sbjct: 186 YENASEALTVSRLDYYRDSILDKPVKVAGVVKPGTLKKAGES-DIRFSLLDADDQTSEVS 244 Query: 93 VSYEGILPDLFREGQGVVVQGELEKGNHILAKEV 126 V ++G +P+ EG VV+ G L K ++ Sbjct: 245 VKFDGGIPEGIGEGTSVVLTGSLSKDGTFACTDI 278 >UniRef50_C9KN72 Putative cytochrome c-type biogenesis protein CcmE n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN72_9FIRM Length = 122 Score = 61.8 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 18/134 (13%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 ++RK L + +G ++ ++ TP G +E + ++V Sbjct: 1 MKRKILLIVLLLAF------VGYAGWSFADSV----TP---YVGIKEAKAATSSN--VQV 45 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYD--AEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 G++ + FT+ D + V Y G PD F E +V G ++ Sbjct: 46 KGLLAQDAPAPHMEGDDFVFTLQDEETGEQLLVHYHGTKPDQFDEAHHIVAIGRMQ-DGV 104 Query: 121 ILAKEVLAKHDENY 134 + ++L K Y Sbjct: 105 FSSDKLLIKCPSKY 118 >UniRef50_Q2S0I5 Cytochrome c-type biogenesis protein CcmE, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S0I5_SALRD Length = 143 Score = 61.1 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 41/126 (32%), Gaps = 11/126 (8%) Query: 10 WIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPG 69 W LAG+ L+ S + + + VG Sbjct: 3 WKTILGLAGMIGFGTLLFVNFGSQVGGYMNFEQAARTGATAHV---------VGTWAEDR 53 Query: 70 SVQRDPNSLKVTFTIYDAEGSVD-VSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLA 128 D TF + D +G+V V Y P F E + VVV+G + +A+ +L Sbjct: 54 PTSYDRMQNVFTFYMRDEDGTVRKVRYNNPKPANFEEAEQVVVEGR-NQDGTFVAENILV 112 Query: 129 KHDENY 134 K Y Sbjct: 113 KCPSKY 118 >UniRef50_C0GG62 Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GG62_9FIRM Length = 122 Score = 61.1 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 38 YTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSV-DVSYE 96 +T + E + ++V G+ + G+V + +F + D G V+++ Sbjct: 22 FTARSAFESYITFAEAREATRNVQVKGVALEGTVIEH-DLETWSFELEDLAGETQRVTHQ 80 Query: 97 GILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPE 138 G +P E VVV G+ + N +A ++L K Y P E Sbjct: 81 GNMPPNLFEADNVVVVGQFD-DNDFVASQILVKCPSKYAPEE 121 >UniRef50_C9LX59 Putative cytochrome c-type biogenesis protein CcmE n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LX59_9FIRM Length = 124 Score = 58.8 bits (141), Expect = 6e-08, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 12/122 (9%) Query: 14 AVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQR 73 + +AL + +A +I TP + + ++V G++ P + Sbjct: 6 VLFGLIALFVLYAGWAFADSI----TP------YVDIAEARSAHGSVQVKGLLDPDAPAP 55 Query: 74 DPNSLKVTFTIYDAEGS-VDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDE 132 F + D G ++V Y G PD FR +V G K A +L K Sbjct: 56 AQKGKDFVFGLVDESGEKMEVHYHGTEPDQFRSAHHIVAVGSY-KDGAFEADRLLIKCPS 114 Query: 133 NY 134 Y Sbjct: 115 KY 116 >UniRef50_Q3IRX9 Cytochrome c-type biogenesis protein n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IRX9_NATPD Length = 152 Score = 57.6 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 55/131 (41%), Gaps = 21/131 (16%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRS--NIDLFYTPGEILYGKRETQQMPEVGQ 58 M+ R K AV+ G+ + + L + A + F TP ++ + + Sbjct: 1 MDRRTK-------AVVGGVGIAVLLAILATTTMGAAAEFVTPTDL------EEDDDYQNE 47 Query: 59 RLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKG 118 +++ G V + F + D + V+Y+G +P+ EG+ VV +G + G Sbjct: 48 LVKLEGQVTD-----LEEGPPIAFAVDDGNYTKAVTYDGEMPETMSEGRIVVAEGHFD-G 101 Query: 119 NHILAKEVLAK 129 ++A ++ + Sbjct: 102 ETLVADDLTVR 112 >UniRef50_C4V0J0 Putative uncharacterized protein n=2 Tax=Selenomonas RepID=C4V0J0_9FIRM Length = 124 Score = 56.8 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 17/129 (13%) Query: 8 RLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVM 67 R + ++ G IG Y ++ + + + + ++V G + Sbjct: 2 RKYFFLILILGF---IGYAGYFFADSVTPYVSVADA----------RAAQRNVQVKG-IP 47 Query: 68 PGSVQRDPNSLKVTFTIYD--AEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKE 125 +V F+I D ++ V Y+G PD F + VV G+ G+ A + Sbjct: 48 DDTVAPHMEDGHFVFSIADEETGETMLVRYKGAKPDTFDDAYHVVAIGKYT-GDAFAADK 106 Query: 126 VLAKHDENY 134 +L K Y Sbjct: 107 LLIKCPSKY 115 >UniRef50_Q5V2E7 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Haloarcula marismortui RepID=Q5V2E7_HALMA Length = 173 Score = 56.1 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 14/124 (11%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 ++ K RL + ++ L + + + + F TP +I T G R+ + Sbjct: 1 MQTKTRLLVGGVLIPVLFGA--MAVTTMGGAAE-FTTPTKI------TDTNEYNGDRVNL 51 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 G+V + + + +++F + D SV V Y+G +P+ G+ VV +G G+ + Sbjct: 52 EGIV----IDIEQTNDQLSFNVTDENESVPVVYDGPMPETMSVGRTVVAKGYY-NGSVVE 106 Query: 123 AKEV 126 A+ + Sbjct: 107 AESL 110 >UniRef50_O28092 Uncharacterized protein AF_2191 n=1 Tax=Archaeoglobus fulgidus RepID=Y2191_ARCFU Length = 125 Score = 56.1 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 20/119 (16%) Query: 16 LAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDP 75 L L L + L NI + TP +++ + + + VG+ + V G Sbjct: 24 LIALVSFTALAIIVLYHNISPYLTPSDLIAQGK-AENVQVVGKIVSVNGN---------- 72 Query: 76 NSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENY 134 TF + D + ++ Y G + R VVV G + G + A +VL K Y Sbjct: 73 -----TFQLSDGKNTITAVYNGTVQ---RYDAEVVVVGNWD-GKVLHATKVLQKCHTEY 122 >UniRef50_UPI00006CB2D3 hypothetical protein TTHERM_00455200 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB2D3 Length = 195 Score = 55.3 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 59 RLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGE---L 115 + ++ G++ GS + SL+ F I D + ++V Y+GI F+EG+ +V+ L Sbjct: 93 KFQIFGVLKVGSTKMQRGSLETRFVITDFKEEIEVFYKGITKFEFKEGETIVLTAYCPDL 152 Query: 116 EKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPAS 152 ++ ++A + L KH EV+ + + + Sbjct: 153 KERKKVIAIDYLTKHS---M--EVQDWQSKSGKSREN 184 >UniRef50_B3QVM9 Cytochrome c-type biogenesis protein CcmE, putative n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVM9_CHLT3 Length = 130 Score = 55.3 bits (132), Expect = 7e-07, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 12/131 (9%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 K++ + AV+A + + +N + E T G Sbjct: 2 KSKFIVGGAVIAAVLGWLVFTAQEWGANTIGYSNFAEAKSNGALTSVK---------GYW 52 Query: 66 VMPGSVQRDPNSLKVTFTIYD-AEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 V + D TF + D ++V Y+ P+ F + +VVQG+ A Sbjct: 53 VKEK--ESDIKVNVFTFYMEDEDGNELEVIYDKGKPNNFEQATSIVVQGKYADDGRFHAN 110 Query: 125 EVLAKHDENYT 135 +L K Y Sbjct: 111 NILVKCPSKYQ 121 >UniRef50_Q12WM0 Cytochrome c-type biogenesis protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WM0_METBU Length = 126 Score = 54.9 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 16/137 (11%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN +RK L I V + IGL + + +I ++ VGQ++ Sbjct: 1 MNKKRKAILTILAIV---AVMVIGLWGVDVEQG---YLMVSDITTSPQD-----HVGQKV 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYD---AEGSVDVSYEGILPDLFREGQGVVVQGELEK 117 G+V G++ P V+FT+ D E +D+ Y LP EG + + G + Sbjct: 50 STMGLVKNGTLSISPE--MVSFTLVDAEDKEHEIDIEYTADLPANIVEGNSISLTGTMIS 107 Query: 118 GNHILAKEVLAKHDENY 134 + I A++++ Y Sbjct: 108 ESKIEAEQIVIGCPSKY 124 >UniRef50_Q55DW5 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q55DW5_DICDI Length = 1791 Score = 54.9 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 10/100 (10%) Query: 38 YTPGEILYGKRETQQMPEV----GQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEG-SVD 92 +P EI + + +LR+ G + GS+ D + +F + D++G +D Sbjct: 1553 LSPSEINENSQNPNTKATIIGNQQMQLRMFGEIQQGSLV-DRDCNGCSFRVSDSKGFYLD 1611 Query: 93 VSYEGILPDLFRE---GQGVVVQGELEKGNHILAKEVLAK 129 V Y +P F + GQ V+V G+L+ +A VL K Sbjct: 1612 VHYSHRVPPFFNDTQSGQQVIVIGKLQ-DGRFIADNVLCK 1650 >UniRef50_A9B1R7 Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1R7_HERA2 Length = 133 Score = 53.0 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 15/111 (13%) Query: 27 LYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYD 86 ++ ++ + E R Q M + G V G+ FT+ D Sbjct: 29 FTSMGDSLTPYVNVTEAKASGRNVQVMGYPQNQ----GTVESGTF---------RFTMRD 75 Query: 87 AEGS-VDVSYEGILPDLFREGQGVVVQGELEKG-NHILAKEVLAKHDENYT 135 G ++V Y P F + VV G ++ +A ++L K Y Sbjct: 76 EMGQPIEVLYRQPKPGNFDQAISVVAIGAFDESQGIFVADDLLVKCPSKYQ 126 >UniRef50_A0CI93 Chromosome undetermined scaffold_19, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0CI93_PARTE Length = 181 Score = 51.8 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 57/130 (43%), Gaps = 14/130 (10%) Query: 12 ACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQ--MPEVGQRLRVGGMVMPG 69 A +LAG+ ++ I F+ ++++ + + + Q + G++ PG Sbjct: 38 AIGILAGIQISATF--------ISHFFVDKQVIFPVEDYLKNDKIKENQHYSIAGIIKPG 89 Query: 70 SVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGE---LEKGNHILAKEV 126 +++ +L V F + + + + V Y G F+EG+ +V+ L+ N I+ + Sbjct: 90 TIEIKRGTLDVKFILTNFDDDITVIYRGETKYEFKEGETIVLTAYTPDLKNKNRIIGLDY 149 Query: 127 LAKHD-ENYT 135 KH + Y Sbjct: 150 QTKHSMDGYM 159 >UniRef50_A1HQT9 Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQT9_9FIRM Length = 122 Score = 51.8 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 16/132 (12%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R RL+ VL LA T ++ +L +D + G ++V G Sbjct: 2 RSWRLFALAVVLLFLAFTAYMLRGSLTPYVDF--------------AEARRTGSVVQVRG 47 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSV-DVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 ++ + + F ++D +G V Y G P+ +VV G + +A Sbjct: 48 IMASPPAPVAGDDRAIRFWLWDEKGEAAPVVYRGPTPEGLEHADSIVVVGRYGQAG-FIA 106 Query: 124 KEVLAKHDENYT 135 + +L K Y Sbjct: 107 ERLLVKCPSKYR 118 >UniRef50_D2MJF3 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJF3_9BACT Length = 160 Score = 51.4 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 6/110 (5%) Query: 18 GLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNS 77 G L + +V L N + L ++ Q+ P +RV GMV G+++ Sbjct: 9 GGVLIVAIVFIVLTYN--YYRDHLASLVPQQVKQEAPTGD--VRVLGMVQGGTLETRAAG 64 Query: 78 LKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKG-NHILAKEV 126 + TFT+ ++ V Y+G PD RE + +V+ G A+++ Sbjct: 65 -EATFTLLGKSATLPVHYQGPPPDNLRELKILVLVGTWNAATQVFEARDI 113 >UniRef50_C7PPB0 Putative uncharacterized protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PPB0_CHIPD Length = 130 Score = 51.4 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 52/132 (39%), Gaps = 15/132 (11%) Query: 13 CAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMV-MPGSV 71 +L +A+ IG+++ + + G+ +V G + ++ Sbjct: 6 IVLLVLIAVAIGVIVTVAGDFSTY----------ETFATARQKEGKEFQVIGKLDTTKTL 55 Query: 72 QRDP--NSLKVTFTIYDAEGSV-DVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLA 128 + DP ++ + F + D G + V + G P F + + VV+ G++ G ++L Sbjct: 56 EYDPVKDANLLRFYVVDKTGEIQPVVFYGTKPTDFEKAESVVLTGKMSNG-EFKCSKILM 114 Query: 129 KHDENYTPPEVE 140 K Y +V Sbjct: 115 KCPSKYKNDQVA 126 >UniRef50_D2UCX5 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UCX5_XANAL Length = 49 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 20/32 (62%) Query: 118 GNHILAKEVLAKHDENYTPPEVEKAMEANHRR 149 +A+EV AKHDE Y P E+ + M+ HR+ Sbjct: 11 DGAFVAEEVPAKHDETYMPRELAENMDQAHRK 42 >UniRef50_A7NSA9 Putative uncharacterized protein n=6 Tax=Chloroflexaceae RepID=A7NSA9_ROSCS Length = 140 Score = 50.3 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 4/102 (3%) Query: 36 LFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGS-VDVS 94 + + + G+ +++ G + G + R F + D+ G + V Sbjct: 33 YYGLTASYRPYTVSIDEATQSGRSVQLAGYL--GDMGRYDADGNFVFMLQDSTGKMIPVV 90 Query: 95 YEGILPDLFREGQGVVVQGELE-KGNHILAKEVLAKHDENYT 135 Y P F + +V G + LA ++L K Y Sbjct: 91 YAKPKPSNFEQAVSIVAIGHYDTARGVFLADDLLVKCPSKYQ 132 >UniRef50_C6Y3X0 Putative uncharacterized protein n=2 Tax=Pedobacter RepID=C6Y3X0_PEDHD Length = 136 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 14/126 (11%) Query: 12 ACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSV 71 A L +AL +G L +L ++ + + T E RE M + GM Sbjct: 5 AIIGLITIALCVGF-LVSLSADTNTYSTFTEASKDPREFHVMGYWEKE---KGM------ 54 Query: 72 QRDP--NSLKVTFTIYDAEGSV-DVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLA 128 D ++ + F + D G V V Y G P F + +V+ G++++ A ++L Sbjct: 55 HYDALKDANRFEFFMKDQNGKVNKVVYAGTKPQDFERSEKLVLIGKMDQD-TFYASKILM 113 Query: 129 KHDENY 134 K Y Sbjct: 114 KCPSKY 119 >UniRef50_A3HVJ6 Cytochrome c-type biogenesis protein CcmE, putative n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVJ6_9SPHI Length = 138 Score = 48.7 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 75 PNSLKVTFTIYDAEGSV-DVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDEN 133 + TF + D +G+ +V Y +P F + VVV G+ + +A ++L K Sbjct: 68 DDKTSFTFVLVDNDGTEQEVFYNEPVPADFTRSESVVVIGQYKTEEIFIADKILMKCPSK 127 Query: 134 YTPPEVEKA 142 Y +V+ A Sbjct: 128 YQETDVQAA 136 >UniRef50_C6W7T7 Putative uncharacterized protein n=3 Tax=Flexibacteraceae RepID=C6W7T7_DYAFD Length = 144 Score = 47.2 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 82 FTIYDAEG-SVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENY 134 FT+ D V Y+ P F + + VVV G++++G+ A+++L K Y Sbjct: 77 FTLIDNNNVEQKVVYKNSKPQDFDKSEQVVVVGKMQQGS-FTAEKILMKCPSKY 129 >UniRef50_C2FWM8 Cytochrome c family biogenesis protein CcmE n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWM8_9SPHI Length = 139 Score = 47.2 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Query: 76 NSLKVTFTIYDAEGS-VDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENY 134 ++ +F +YD + + V + G P + +V+ G++E GN A ++L K Y Sbjct: 61 DANHFSFYMYDNDSTECQVVFNGAKPQDIERSEQIVLTGKME-GNIFHASKILMKCPSKY 119 Query: 135 TPPEVEKAMEANHRRPASV 153 ++E A + AS+ Sbjct: 120 NQDQIEVTESAATPKTASI 138 >UniRef50_D2QN11 Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN11_9SPHI Length = 159 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 10/111 (9%) Query: 46 GKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLK--------VTFTIYDAEGSV-DVSYE 96 K E + + + V G V + R + L FT+ D E V + Sbjct: 46 TKAEQMKKEGDDKMIHVVGKVQKDAQGRITDMLYNPAIDPNHFEFTLIDNENRAQKVVFN 105 Query: 97 GILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANH 147 P F + +V+ G ++ G+H ++L K Y ++E Sbjct: 106 SPKPQDFERSEQIVIIGAMQ-GDHFQCNKILLKCPSKYQDGKLETTEHEAK 155 >UniRef50_A8DJC8 DNA polymerase III alpha subunit n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJC8_9BACT Length = 445 Score = 39.5 bits (91), Expect = 0.034, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 15/98 (15%) Query: 27 LYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLK-VTFTIY 85 L R + F + L +Q P GQ +R+GG+V V+ + FT+ Sbjct: 253 LATFRETLAAFKS----LSYAELAEQAPGPGQVVRMGGIVSNFVVKNTKKGDRFAVFTLE 308 Query: 86 DAEGSVDVSYEGILPDLFR-------EGQGVVVQGELE 116 D GS++V P+ FR +G V+V G +E Sbjct: 309 DETGSIEVI---AWPETFRRFGEQVTDGAAVLVTGRVE 343 >UniRef50_D2RHD0 Putative uncharacterized protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RHD0_ARCPR Length = 123 Score = 39.5 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 26/136 (19%) Query: 16 LAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDP 75 + L + GL+ Y S+ + ++ K +R+ V G V GSV+ + Sbjct: 7 VIALTMVFGLIGYLTLSSTSY-LSVSDLKEIKDI--------RRVVVIGNVTKGSVKFED 57 Query: 76 NSLKVTFTIYDAEGSVDVSYEGILPDLFR----EGQG-VVVQGELEKGN-HILAKEVLAK 129 + + F I D V V Y P R G G VVV+G N I A + +K Sbjct: 58 H---LEFRINDGVWEVKVIY----PSYVRLDNASGYGTVVVEGTYYPENKTIFAVRIESK 110 Query: 130 HDENYTPPEVEKAMEA 145 +V +A + Sbjct: 111 CPS----KQVVEAYKG 122 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A7FGJ2 Cytochrome c-type biogenesis protein ccmE n=135 ... 196 2e-49 UniRef50_A3N216 Cytochrome c-type biogenesis protein ccmE n=93 T... 184 7e-46 UniRef50_A6V817 Cytochrome c-type biogenesis protein ccmE n=80 T... 183 2e-45 UniRef50_Q1ZIX0 Cytochrome c-type biogenesis protein CcmE n=4 Ta... 179 2e-44 UniRef50_A9W2K2 Cytochrome c-type biogenesis protein ccmE n=28 T... 177 7e-44 UniRef50_Q69AY8 Cytochrome c-type biogenesis protein ccmE n=27 T... 176 2e-43 UniRef50_Q46RW7 Cytochrome c-type biogenesis protein ccmE n=10 T... 175 5e-43 UniRef50_D0Y445 CcmE/CycJ protein n=1 Tax=Caulobacter segnis ATC... 174 7e-43 UniRef50_B8H1L5 Cytochrome c-type biogenesis protein ccmE n=4 Ta... 174 1e-42 UniRef50_Q2RYF4 Cytochrome c-type biogenesis protein ccmE n=7 Ta... 173 2e-42 UniRef50_C6P0C2 CcmE/CycJ protein n=1 Tax=Sideroxydans lithotrop... 172 2e-42 UniRef50_C6N3B8 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 172 3e-42 UniRef50_A4YRM0 Cytochrome c-type biogenesis protein ccmE n=28 T... 171 8e-42 UniRef50_C7RAW0 CcmE/CycJ protein n=1 Tax=Kangiella koreensis DS... 169 3e-41 UniRef50_C5S795 CcmE/CycJ protein n=1 Tax=Allochromatium vinosum... 166 2e-40 UniRef50_D0J750 Cytochrome C-type biogenesis protein n=1 Tax=Com... 164 6e-40 UniRef50_Q0AR54 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 163 1e-39 UniRef50_A6X2C8 Cytochrome c-type biogenesis protein ccmE n=37 T... 163 2e-39 UniRef50_D0RQU2 CcmE/CycJ protein n=1 Tax=alpha proteobacterium ... 162 3e-39 UniRef50_A5WHG7 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 160 1e-38 UniRef50_Q21JJ9 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 159 2e-38 UniRef50_Q3BSK6 Cytochrome c-type biogenesis protein ccmE 2 n=19... 158 4e-38 UniRef50_B6IVR1 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 158 4e-38 UniRef50_B0SVC7 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 155 3e-37 UniRef50_A0LDE3 CcmE/CycJ protein n=1 Tax=Magnetococcus sp. MC-1... 155 4e-37 UniRef50_A5CWG8 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 155 5e-37 UniRef50_Q478K9 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 154 6e-37 UniRef50_D2MJF2 CcmE/CycJ protein n=1 Tax=Candidatus Poribacteri... 154 7e-37 UniRef50_Q96326 G1p n=8 Tax=Magnoliophyta RepID=Q96326_ARATH 151 6e-36 UniRef50_Q87BH5 Cytochrome c-type biogenesis protein ccmE n=7 Ta... 151 7e-36 UniRef50_Q0A805 Cytochrome c-type biogenesis protein ccmE n=18 T... 151 9e-36 UniRef50_Q4FNY3 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 150 1e-35 UniRef50_B9GW99 Predicted protein (Fragment) n=2 Tax=Embryophyta... 147 2e-34 UniRef50_Q2G8J0 Cytochrome c-type biogenesis protein ccmE n=7 Ta... 147 2e-34 UniRef50_Q5SIG4 Cytochrome c-type biogenesis protein ccmE n=4 Ta... 146 3e-34 UniRef50_Q5NN30 Cytochrome c-type biogenesis protein ccmE n=3 Ta... 144 9e-34 UniRef50_C8N960 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 143 2e-33 UniRef50_A8PN63 CytoChrome c-type biogenesis protein CcmE (Cytoc... 143 2e-33 UniRef50_Q5FHG0 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 142 3e-33 UniRef50_Q2GKI0 Cytochrome c-type biogenesis protein ccmE n=6 Ta... 142 5e-33 UniRef50_A9IR17 Cytochrome c-type biogenesis protein ccmE n=5 Ta... 141 7e-33 UniRef50_C0R3Z7 Cytochrome c-type biogenesis protein ccmE n=6 Ta... 139 3e-32 UniRef50_Q5LL36 Cytochrome c-type biogenesis protein ccmE 2 n=1 ... 139 3e-32 UniRef50_B5J4A6 Cytochrome c-type biogenesis protein CcmE n=4 Ta... 137 9e-32 UniRef50_C6XIM0 CcmE/CycJ protein n=1 Tax=Hirschia baltica ATCC ... 137 2e-31 UniRef50_C1A6K1 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 136 2e-31 UniRef50_A8LMF5 Cytochrome c-type biogenesis protein ccmE n=36 T... 135 5e-31 UniRef50_A8GWM8 Cytochrome c-type biogenesis protein ccmE n=15 T... 134 1e-30 UniRef50_C1D1H5 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 134 1e-30 UniRef50_Q1D7C0 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 134 1e-30 UniRef50_Q1IYZ2 CcmE/CycJ protein n=1 Tax=Deinococcus geothermal... 133 1e-30 UniRef50_A1SI32 CcmE/CycJ protein n=1 Tax=Nocardioides sp. JS614... 131 6e-30 UniRef50_B4SPY3 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 131 7e-30 UniRef50_D2VQC0 Predicted protein n=1 Tax=Naegleria gruberi RepI... 129 3e-29 UniRef50_B3CU35 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 127 9e-29 UniRef50_Q0C2L6 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 127 2e-28 UniRef50_B8D1Q8 Putative cytochrome c-type biogenesis protein Cc... 125 5e-28 UniRef50_B8DNC7 Cytochrome c-type biogenesis protein CcmE n=10 T... 124 1e-27 UniRef50_D1CC97 CcmE/CycJ protein n=1 Tax=Thermobaculum terrenum... 123 1e-27 UniRef50_C7LS40 Cytochrome c-type biogenesis protein CcmE n=3 Ta... 122 4e-27 UniRef50_D1C3N4 CcmE/CycJ protein n=1 Tax=Sphaerobacter thermoph... 122 5e-27 UniRef50_C1XMN8 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 121 6e-27 UniRef50_B9L1G4 Cytochrome c-type biogenesis protein CycJ n=1 Ta... 120 1e-26 UniRef50_Q311W9 Cytochrome c-type biogenesis protein CcmE n=2 Ta... 119 2e-26 UniRef50_Q2GCU8 Cytochrome c-type biogenesis protein ccmE n=2 Ta... 119 3e-26 UniRef50_A3VRG5 Cytochrome c-type biogenesis transmembrane prote... 118 5e-26 UniRef50_C1SLI4 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 116 3e-25 UniRef50_D1J8Y7 Putative cytochrome c-type biogenesis protein n=... 113 1e-24 UniRef50_Q01YS2 Cytochrome c-type biogenesis protein, CcmE-like ... 112 3e-24 UniRef50_Q1IP94 Cytochrome c-type biogenesis protein, CcmE-like ... 111 8e-24 UniRef50_Q9RXG6 Cytochrome c-type biogenesis protein ccmE n=1 Ta... 110 1e-23 UniRef50_D0MF46 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 110 1e-23 UniRef50_C1F370 Putative cytochrome c-type biogenesis protein n=... 108 4e-23 UniRef50_D0LV11 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 108 5e-23 UniRef50_Q648Q0 Putative uncharacterized protein n=1 Tax=uncultu... 107 1e-22 UniRef50_Q2S0I5 Cytochrome c-type biogenesis protein CcmE, putat... 105 4e-22 UniRef50_A9GE04 Putative membrane protein n=1 Tax=Sorangium cell... 105 4e-22 UniRef50_D1H5F6 Whole genome shotgun sequence of line PN40024, s... 103 2e-21 UniRef50_C8S810 Putative uncharacterized protein n=1 Tax=Ferrogl... 101 1e-20 UniRef50_Q3ACB4 Putative cytochrome c-type biogenesis protein Cc... 100 2e-20 UniRef50_A6GFN2 Putative uncharacterized protein n=1 Tax=Plesioc... 100 2e-20 UniRef50_C9KN72 Putative cytochrome c-type biogenesis protein Cc... 98 7e-20 UniRef50_Q8TIK0 Predicted protein n=2 Tax=Methanosarcina RepID=Q... 98 1e-19 UniRef50_B6GDS2 Putative uncharacterized protein n=2 Tax=Collins... 95 6e-19 UniRef50_UPI0001C321C1 Cytochrome c-type biogenesis protein CcmE... 95 8e-19 UniRef50_C7M2R0 CcmE/CycJ protein n=1 Tax=Acidimicrobium ferroox... 94 1e-18 UniRef50_A8VWW5 Putative uncharacterized protein n=1 Tax=Bacillu... 93 3e-18 UniRef50_C9LX59 Putative cytochrome c-type biogenesis protein Cc... 92 9e-18 UniRef50_C7MMS9 Cytochrome c-type biogenesis protein CcmE n=3 Ta... 91 9e-18 UniRef50_B3QVM9 Cytochrome c-type biogenesis protein CcmE, putat... 90 1e-17 UniRef50_D0WG30 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 90 2e-17 UniRef50_Q12WM0 Cytochrome c-type biogenesis protein n=1 Tax=Met... 89 4e-17 UniRef50_C4V0J0 Putative uncharacterized protein n=2 Tax=Selenom... 88 6e-17 UniRef50_Q04V20 Cytochrome c-type biogenesis protein CcmE n=6 Ta... 87 1e-16 UniRef50_A1HQT9 Putative uncharacterized protein n=1 Tax=Thermos... 86 3e-16 UniRef50_C6Y3X0 Putative uncharacterized protein n=2 Tax=Pedobac... 83 2e-15 UniRef50_C7PPB0 Putative uncharacterized protein n=1 Tax=Chitino... 82 5e-15 UniRef50_UPI00006CB2D3 hypothetical protein TTHERM_00455200 n=1 ... 82 7e-15 UniRef50_C0GG62 Putative uncharacterized protein n=1 Tax=Dethiob... 81 1e-14 UniRef50_Q28QS7 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 81 1e-14 UniRef50_A9B1R7 Putative uncharacterized protein n=1 Tax=Herpeto... 81 1e-14 UniRef50_C2FWM8 Cytochrome c family biogenesis protein CcmE n=2 ... 80 2e-14 UniRef50_O28092 Uncharacterized protein AF_2191 n=1 Tax=Archaeog... 78 7e-14 UniRef50_A0CI93 Chromosome undetermined scaffold_19, whole genom... 78 8e-14 UniRef50_A3HVJ6 Cytochrome c-type biogenesis protein CcmE, putat... 78 1e-13 UniRef50_A7NSA9 Putative uncharacterized protein n=6 Tax=Chlorof... 77 2e-13 UniRef50_Q3IRX9 Cytochrome c-type biogenesis protein n=1 Tax=Nat... 73 2e-12 UniRef50_Q5V2E7 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 72 8e-12 UniRef50_Q55DW5 Putative uncharacterized protein n=1 Tax=Dictyos... 68 9e-11 UniRef50_D2MJF3 Cytochrome c-type biogenesis protein CcmE n=1 Ta... 67 1e-10 UniRef50_C6W7T7 Putative uncharacterized protein n=3 Tax=Flexiba... 67 2e-10 UniRef50_D2UCX5 Putative uncharacterized protein n=1 Tax=Xanthom... 48 7e-05 Sequences not found previously or not previously below threshold: UniRef50_D2QN11 Putative uncharacterized protein n=1 Tax=Spiroso... 67 1e-10 UniRef50_D2RHD0 Putative uncharacterized protein n=1 Tax=Archaeo... 53 2e-06 UniRef50_A8A8M6 Putative uncharacterized protein n=1 Tax=Ignicoc... 50 2e-05 UniRef50_D2RL61 DNA internalization-related competence protein C... 45 6e-04 UniRef50_A2BMX2 Putative uncharacterized protein n=1 Tax=Hyperth... 43 0.003 UniRef50_A8DJC8 DNA polymerase III alpha subunit n=1 Tax=Candida... 42 0.007 UniRef50_A5CYU9 Hypothetical membrane protein n=1 Tax=Pelotomacu... 40 0.018 UniRef50_C3CTJ5 Putative uncharacterized protein n=1 Tax=Bacillu... 40 0.029 UniRef50_C0WA53 Putative uncharacterized protein n=1 Tax=Acidami... 39 0.040 UniRef50_C4FT83 Putative uncharacterized protein n=1 Tax=Catonel... 38 0.080 >UniRef50_A7FGJ2 Cytochrome c-type biogenesis protein ccmE n=135 Tax=Gammaproteobacteria RepID=CCME_YERP3 Length = 164 Score = 196 bits (499), Expect = 2e-49, Method: Composition-based stats. Identities = 106/155 (68%), Positives = 127/155 (81%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RRK+RL++A VL G++LT LVLYALRSNIDLFYTPGEIL GK E + P +GQRL Sbjct: 1 MNPRRKSRLYLAMVVLIGISLTTTLVLYALRSNIDLFYTPGEILQGKGERHEKPAIGQRL 60 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMVMPGSVQRD +L+++F +YDA G+V V+Y GILPDLFREGQGVV QG +GN Sbjct: 61 RIGGMVMPGSVQRDAKTLEMSFQVYDARGAVTVTYTGILPDLFREGQGVVAQGVFAEGNT 120 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYK 155 + AKEVLAKHDE YTPPEVE+AM+ NH RPA+ Y+ Sbjct: 121 VHAKEVLAKHDEKYTPPEVEEAMKENHSRPAAAYR 155 >UniRef50_A3N216 Cytochrome c-type biogenesis protein ccmE n=93 Tax=Proteobacteria RepID=CCME_ACTP2 Length = 181 Score = 184 bits (468), Expect = 7e-46, Method: Composition-based stats. Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 1/157 (0%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGK-RETQQMPEVGQR 59 MN RRK+RL + +++ G+A+ GL+LYAL NIDLFYTP EI+ GK + Q PEVGQR Sbjct: 1 MNPRRKSRLKVVVSIIFGVAVAAGLMLYALSQNIDLFYTPSEIVNGKNDDPDQKPEVGQR 60 Query: 60 LRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 +RVGGMV+ GSV+RD +LKV F D S+ V YEGILPDLFREGQG+V QG L + Sbjct: 61 IRVGGMVVEGSVKRDDKTLKVEFEANDIGPSITVEYEGILPDLFREGQGIVAQGVLIEPT 120 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKD 156 + A EVLAKHDENY PPE+ ++ H D Sbjct: 121 RLKATEVLAKHDENYMPPELGDKLKEQHGAAGISEAD 157 >UniRef50_A6V817 Cytochrome c-type biogenesis protein ccmE n=80 Tax=Bacteria RepID=CCME_PSEA7 Length = 162 Score = 183 bits (465), Expect = 2e-45, Method: Composition-based stats. Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 6/148 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RK RL I A+L G+ +GL L AL+ NI+LFYTP +I G+ R+ Sbjct: 1 MNPVRKKRLIIVLAILVGVGAAVGLALSALQQNINLFYTPTQIANGEA------PTDTRI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R GG+V GS+QR +SL V F + D V ++Y GILPDLFREGQG+V G+L Sbjct: 55 RAGGLVEKGSLQRSADSLNVRFVVTDGAKEVTIAYHGILPDLFREGQGIVALGKLGGDGV 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHR 148 ++A EVLAKHDENY PPEV KA++ + + Sbjct: 115 LVADEVLAKHDENYMPPEVTKALKDSGQ 142 >UniRef50_Q1ZIX0 Cytochrome c-type biogenesis protein CcmE n=4 Tax=Gammaproteobacteria RepID=Q1ZIX0_9GAMM Length = 158 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 87/149 (58%), Positives = 110/149 (73%), Gaps = 1/149 (0%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RRK RL I A++ GL+L++GLVL+AL+ NIDLFYTP EI+ GK ET + P++GQRL Sbjct: 1 MNPRRKKRLIITSALVIGLSLSVGLVLFALQQNIDLFYTPTEIVKGKNETGEKPQIGQRL 60 Query: 61 RVGGMVMPGSVQRDPNSLKVTFT-IYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 R+GGMV+ GSV+RD SLKV+F I D V + ++GILPDLFREGQG+V QG L Sbjct: 61 RIGGMVVNGSVKRDQTSLKVSFDLIDDGGERVTIFFDGILPDLFREGQGIVAQGVLLNAT 120 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANHR 148 I A EVLAKHDE Y PPEV++A++ Sbjct: 121 QINAFEVLAKHDEEYMPPEVQEAIKGMKH 149 >UniRef50_A9W2K2 Cytochrome c-type biogenesis protein ccmE n=28 Tax=Proteobacteria RepID=CCME_METEP Length = 177 Score = 177 bits (450), Expect = 7e-44, Method: Composition-based stats. Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 7/155 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R+ RL + A A LAL +GL+L A+ +I F +P E+ G R R Sbjct: 1 MTRKSRRLILIAACGAVLALALGLILSAMSGSIVFFRSPAEVAAQGV------PPGTRFR 54 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GG+V GSV+R P+ V F + D +V V Y G+LPDLFREGQG+V +G L+ G Sbjct: 55 LGGLVKDGSVKRGPDQN-VEFAVTDTNATVPVQYRGLLPDLFREGQGIVAEGTLDVGGVF 113 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKD 156 A VLAKHDENY P EV A++A R K+ Sbjct: 114 RADTVLAKHDENYMPREVADALKAQGRWQEGGSKE 148 >UniRef50_Q69AY8 Cytochrome c-type biogenesis protein ccmE n=27 Tax=cellular organisms RepID=CCME_GLUDA Length = 173 Score = 176 bits (446), Expect = 2e-43, Method: Composition-based stats. Identities = 62/158 (39%), Positives = 81/158 (51%), Gaps = 8/158 (5%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R+ RLW+ A L GL LVL A SNI F P ++ P + +R Sbjct: 1 MTRKSRRLWLVGACLLGLGTATALVLNAFSSNIVFFMAPSQVRA------HPPAADRTIR 54 Query: 62 VGGMVMPGSVQRD--PNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 +GGMV+ GSV+R ++ F + D + +V V Y GILPDLFREGQ VV G + Sbjct: 55 LGGMVVAGSVRRQTQGDTPIALFDVTDGQAAVTVRYAGILPDLFREGQSVVAVGTVAPDG 114 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDP 157 A EVLAKHDE Y P EV +A+ + + K P Sbjct: 115 AFRASEVLAKHDETYMPKEVAEALRRSGKWDPRYGKAP 152 >UniRef50_Q46RW7 Cytochrome c-type biogenesis protein ccmE n=10 Tax=Proteobacteria RepID=CCME_RALEJ Length = 159 Score = 175 bits (443), Expect = 5e-43, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 7/148 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R+ RL + A LA + + LVL A RSN+ F++P ++ + Sbjct: 1 MTPRQ-RRLGMLLAALACAGIALALVLNAFRSNLVFFFSPSQV------AAHEAPASRSF 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V PGS++R+ + + V F + D V V Y G+LPDLFREG+GVV +G L++ Sbjct: 54 RLGGLVAPGSIRREGDGMTVRFIVTDKAREVPVVYRGLLPDLFREGKGVVARGTLDRSGT 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHR 148 +A EVLAKHDENY PPE A++ + Sbjct: 114 FVASEVLAKHDENYMPPEAADALKQAEQ 141 >UniRef50_D0Y445 CcmE/CycJ protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y445_9CAUL Length = 202 Score = 174 bits (442), Expect = 7e-43, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 7/157 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 + + + RL I AV LAL +GL LY +R +I LFYTP + + G++++ Sbjct: 12 SRKARRRLTILLAVAPVLALAVGLALYGMRDSISLFYTPAQAQEAHVK------PGRKVQ 65 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GG+V GSV + + V F + D + + + Y G LPDLFREGQG+V +G + Sbjct: 66 LGGLVQHGSVVKHADGN-VEFVVADQKATAKIVYHGDLPDLFREGQGIVAEGTFNEQGVF 124 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPA 158 +AK+VLAKHDE Y P EV KA++ PA Sbjct: 125 VAKQVLAKHDERYMPREVSKALKEQGEWRGEGAGAPA 161 >UniRef50_B8H1L5 Cytochrome c-type biogenesis protein ccmE n=4 Tax=Caulobacteraceae RepID=CCME_CAUCN Length = 162 Score = 174 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 64/157 (40%), Positives = 85/157 (54%), Gaps = 7/157 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 + + + RL I A+ LAL +GL LY LR +I LFYTP + K G++++ Sbjct: 7 SRKARRRLTILLAIAPVLALAVGLALYGLRDSISLFYTPAQAQEAKVSA------GRKVQ 60 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GG+V GSV + P+ V F I D + + V Y G LPDLFREGQG+V +G Sbjct: 61 LGGLVQHGSVVKYPDGN-VEFVIADQKATAKVVYHGDLPDLFREGQGIVAEGSFNPAGVF 119 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPA 158 AK VLAKHDE Y P EV KA++ PA Sbjct: 120 EAKLVLAKHDERYMPREVSKALKEQGEWRGEGADAPA 156 >UniRef50_Q2RYF4 Cytochrome c-type biogenesis protein ccmE n=7 Tax=Bacteria RepID=CCME_RHORT Length = 153 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 84/151 (55%), Gaps = 8/151 (5%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R+K RL+ + L GL L A + N+ FY+P ++ + G+R R Sbjct: 1 MTRKKRRLYFVVLGMLALFAAAGLTLTAFQDNLVFFYSPTDLQEKGVD------QGRRFR 54 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 VGG+V GSV RD V F + D +V V Y G+LPDLFREGQGVV +G ++ Sbjct: 55 VGGLVEEGSVVRDGE--TVRFIVTDLMNTVTVRYTGMLPDLFREGQGVVAEGAMDGAGTF 112 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPAS 152 +A VLAKHDENY PPEV ++++A+ + Sbjct: 113 VAASVLAKHDENYMPPEVAESLKASGKWQHG 143 >UniRef50_C6P0C2 CcmE/CycJ protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0C2_9PROT Length = 164 Score = 172 bits (437), Expect = 2e-42, Method: Composition-based stats. Identities = 63/138 (45%), Positives = 90/138 (65%), Gaps = 7/138 (5%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R+K RLW L + +GLVL+AL++N+ L++TP ++ + + Sbjct: 1 MTPRKK-RLWFIVGGLVLVGAAVGLVLFALKNNVSLYFTPTQV------YNKEAPQNRSF 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GS++R+ + L V F I D ++ V Y+GILPDLF+EG+GVV QG+LE+GN Sbjct: 54 RIGGLVESGSLKRENDGLTVHFNITDTFKTMAVVYKGILPDLFKEGKGVVAQGKLEEGNV 113 Query: 121 ILAKEVLAKHDENYTPPE 138 A+EVLAKHDENY PPE Sbjct: 114 FHAEEVLAKHDENYMPPE 131 >UniRef50_C6N3B8 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Legionella RepID=C6N3B8_9GAMM Length = 164 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 70/145 (48%), Positives = 86/145 (59%), Gaps = 6/145 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RK ++ I + LA L++ GLVLYALR NI LFYTP ++ G+ Q + Sbjct: 22 MNPARKRKILILLSALAVLSIAAGLVLYALRQNISLFYTPTQVAEGQAPLQHA------I 75 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV GS R L V F + D +V V + GILPDLFREGQGVVV+G L Sbjct: 76 RIGGMVEKGSFIRASKGLDVEFKVTDFTKTVTVLHTGILPDLFREGQGVVVEGRLLDNQR 135 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEA 145 A VLAKHD NY PPEV+ A+ Sbjct: 136 FQATRVLAKHDANYMPPEVKAALAK 160 >UniRef50_A4YRM0 Cytochrome c-type biogenesis protein ccmE n=28 Tax=Alphaproteobacteria RepID=CCME_BRASO Length = 171 Score = 171 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 7/158 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R++ RL I L LA+ GLVL ALR +I F TP + ++ G+R R Sbjct: 1 MTRKQRRLTIIGGALFVLAVAAGLVLNALRDSIVFFSTPTMV------AEKHVAPGKRFR 54 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GG+V PGS++R + L VTF + D + V+Y+GILPDLFREGQGVV +G L+ Sbjct: 55 LGGLVQPGSLKRGDD-LAVTFEVADGGAKLPVAYKGILPDLFREGQGVVAEGALDASGVF 113 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS 159 A VLAKHDE Y P EV ++ K + Sbjct: 114 KADTVLAKHDETYMPKEVADTLKKQGHWKDDYGKPQGA 151 >UniRef50_C7RAW0 CcmE/CycJ protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAW0_KANKD Length = 163 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 6/151 (3%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + R+N+L + L L+ + L+LYAL NI+ FY P E+ G + + + Sbjct: 1 MKVHRRNKLIAIISGLVLLSGAVALILYALTENINHFYAPTEVKEGNA------PLNKTI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGG+V+PGS++R L V F I D + + +SY+ ILPD+F+EGQGV+ +G+L + N Sbjct: 55 RVGGLVVPGSIERSGERLYVEFKITDNQSQMVISYDNILPDMFKEGQGVIAEGQLVEKNK 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPA 151 ++A +VLAKHDE Y PPEVE +++ Sbjct: 115 LVASKVLAKHDETYMPPEVEASLQKYGHPMQ 145 >UniRef50_C5S795 CcmE/CycJ protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S795_CHRVI Length = 160 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 7/149 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R+K RL + G+ L + AL+SN+ F++P +++ + + Sbjct: 1 MKARQK-RLVFVGLAILGIGAASTLAITALKSNLSYFFSPSQVIAKEAPADHV------F 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GS+QR L V F + D +V V+YEGILPDLF+EG GVV +G L Sbjct: 54 RLGGLVTEGSLQRQGEGLTVYFDVTDNASTVKVAYEGILPDLFKEGSGVVAKGRLRPDGV 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRR 149 A+EVLAKHDE Y PPEV ++ H Sbjct: 114 FQAEEVLAKHDEEYMPPEVASTLQTAHAE 142 >UniRef50_D0J750 Cytochrome C-type biogenesis protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J750_COMTE Length = 170 Score = 164 bits (416), Expect = 6e-40, Method: Composition-based stats. Identities = 67/159 (42%), Positives = 90/159 (56%), Gaps = 7/159 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R+ RL A LA +A + LVL AL SN+ FY+P ++ G+ G Sbjct: 1 MKPRQ-RRLLWVLAGLALVAAAVTLVLRALNSNVMFFYSPSQVHAGEV------PHGAAF 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V PGS+QR + + + F + D SV V Y G+LPDLFREG+GVVV G ++ Sbjct: 54 RLGGLVEPGSLQRSGDGMLLRFAVTDEVRSVPVQYRGLLPDLFREGKGVVVSGRMQADGA 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS 159 A EVLAKHDENY PPE A++ +P D A+ Sbjct: 114 FQASEVLAKHDENYMPPEAAHALKNAAGKPPEKSADDAT 152 >UniRef50_Q0AR54 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Hyphomonadaceae RepID=CCME_MARMM Length = 158 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 63/159 (39%), Positives = 81/159 (50%), Gaps = 7/159 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R RL A L + +GL L ALRS + FY+P EI + P + R+ Sbjct: 1 MMRHRNRRLATIAASAIVLVVAVGLGLMALRSAVVFFYSPSEI------AAEHPGIEARI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGG+V+ SV + F I D +V V Y G+LPDLFREGQGVVV+G Sbjct: 55 RVGGLVLEESVGEAASGAT-RFVITDRVENVQVEYAGLLPDLFREGQGVVVEGRFAADGV 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS 159 + A+ VLAKHDE Y PPEV +A+ A+ Sbjct: 114 LQARTVLAKHDETYMPPEVAEALREAGVWQGEGETPSAA 152 >UniRef50_A6X2C8 Cytochrome c-type biogenesis protein ccmE n=37 Tax=Brucellaceae RepID=CCME_OCHA4 Length = 165 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 8/150 (5%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 + R++ RL++ LA LA+ +GL+L A +I F TP ++ T+Q G R R Sbjct: 23 SQRKRKRLFLIGGALAVLAVAVGLMLMAFSQDIRFFRTPADL------TEQDMASGSRFR 76 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GG+V GSV R ++ FT+ D +V V +EGI PDLFREGQGVV +G Sbjct: 77 LGGLVEEGSVSR--EGSELRFTVTDTIKTVKVVFEGIPPDLFREGQGVVAEGRFGDDGVF 134 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPA 151 A VLAKHDENY P ++ +++ Sbjct: 135 RADNVLAKHDENYVPKDLADSLKEKGVWEG 164 >UniRef50_D0RQU2 CcmE/CycJ protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQU2_9RICK Length = 147 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 8/155 (5%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN + K RL + + + +L N F++P E+ + Sbjct: 1 MNNKTKQRLSFFLVSVIAFIIIGKFIYESLSKNTVYFFSPSELYISTE------LPNGLI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV GS+ + + +F I D + + V+Y GI P+LF EGQG VV+G+L N Sbjct: 55 RIGGMVKKGSLIKA--GNRYSFIITDFKNDISVNYIGIKPNLFEEGQGAVVEGKLSTRNS 112 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYK 155 ++A ++LAKHDENY P EV A++ + + K Sbjct: 113 LMASKILAKHDENYMPKEVADALKKSGDWNKNYGK 147 >UniRef50_A5WHG7 Cytochrome c-type biogenesis protein ccmE n=5 Tax=Gammaproteobacteria RepID=CCME_PSYWF Length = 175 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 8/152 (5%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN R+ +L A LAG + + LV+YA+ D ++ P I G +R+ Sbjct: 1 MNAVRRKKLIWVAATLAGAIIAVLLVIYAIGQQTDYYFDPTAIAAGDA------PQNKRI 54 Query: 61 RVGGMVMPGSVQRDP-NSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 R GGMV+ SV+RDP + LKV F I D +V VSY+GILPDLF E GVV GE+ +G Sbjct: 55 RAGGMVVKDSVRRDPNDDLKVQFEITDFNATVPVSYQGILPDLFAENSGVVATGEM-QGK 113 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANHRRPA 151 +A EVLAKHDENY PPEV +++ +H Sbjct: 114 VFVASEVLAKHDENYMPPEVAASLKEDHAAKG 145 >UniRef50_Q21JJ9 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Gammaproteobacteria RepID=CCME_SACD2 Length = 157 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 94/146 (64%), Gaps = 6/146 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ RK RL ++ ++ +GL+++AL N++LFY P +I+ G+ G + Sbjct: 1 MHPVRKQRLMTVLFIVIASSVAVGLMVFALSKNLNLFYPPSQIVSGEA------PRGPTI 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R GG V+PGSV+R +SLKV F+I D + SV V YEG+LPDLF EG+ VV G++ + Sbjct: 55 RGGGCVVPGSVERASDSLKVAFSITDGKESVLVRYEGLLPDLFDEGEAAVVTGKVTQEGV 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEAN 146 A EVLAKHDE YTPPEVE AM+ + Sbjct: 115 FEAVEVLAKHDETYTPPEVENAMKES 140 >UniRef50_Q3BSK6 Cytochrome c-type biogenesis protein ccmE 2 n=19 Tax=Xanthomonas RepID=CCME2_XANC5 Length = 156 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 7/150 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN +R+ RLW+ A++ L LV AL+ N+ YTP E+L G R Sbjct: 1 MNPQRRRRLWLVLALVLAGGLATTLVAMALQRNVAYLYTPSEVLRGDAGAHS------RF 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV GS +R +L+ F + D + + VSY+ ILPDLFREGQ VV G ++ Sbjct: 55 RLGGMVEKGSFKRASGALEAQFRVTDGDAQLPVSYDRILPDLFREGQAVVATGRMQN-GI 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRP 150 +A++VLAKHDE Y P EV M + HR+ Sbjct: 114 FVAEDVLAKHDETYMPKEVADKMGSAHRKH 143 >UniRef50_B6IVR1 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Rhodospirillum centenum SW RepID=CCME_RHOCS Length = 168 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 60/146 (41%), Positives = 86/146 (58%), Gaps = 7/146 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R+K RL++ L GL L L A NI FY+P +++ P + +R Sbjct: 1 MTRKKRRLYMLGLALLGLGTATALTLSAFEENIVFFYSPSDLVVQ-------PPGDRSVR 53 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GG+V GSVQ+ + L +TF + D +V V+Y+GI+PDLFREGQGVV +G + Sbjct: 54 LGGLVEDGSVQKQADGLTITFRVTDTANTVPVTYKGIVPDLFREGQGVVAEGRMGGDGVF 113 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANH 147 +A+EVLA+HDENY PPEV A++ Sbjct: 114 VAREVLARHDENYMPPEVHDALQRAG 139 >UniRef50_B0SVC7 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Caulobacteraceae RepID=CCME_CAUSK Length = 166 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 7/156 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 + + + RL I +AL +GL L+ +R I LFYTP + G++++ Sbjct: 7 SRKARRRLTILAVAAPVVALAVGLALWGMRDAISLFYTP------AQAAAAHVPAGRKVQ 60 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GG+V GSV + P+ L V F + D + V Y+G LPDLFREGQG+V G ++ Sbjct: 61 LGGLVKAGSVVKHPDGL-VEFVVADQRSTALVHYKGDLPDLFREGQGIVASGAFDESGTF 119 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDP 157 +A +VLAKHDE Y P EV KA++ Sbjct: 120 VANQVLAKHDERYMPREVAKALKEQGEWRGDGQAPS 155 >UniRef50_A0LDE3 CcmE/CycJ protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDE3_MAGSM Length = 156 Score = 155 bits (392), Expect = 4e-37, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 7/155 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R RL + ++ + LV + + F+TP E++ E VG+++R Sbjct: 7 KRMRNKRLLLIATLVLVGGALLTLVFQSFSGAMVYFHTPTEVMQKTVE-----LVGKKVR 61 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GGMV GS+ R +L++TF + D E + V Y+G+ PDLFREGQGVVV+GE Sbjct: 62 IGGMVQAGSLSRKEGTLEITFDVTDGETPISVYYKGVTPDLFREGQGVVVEGEWLNTKPF 121 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKD 156 +A +LAKH E+Y P VE EA + ++ K Sbjct: 122 IAHTILAKHSEDYMP--VEMNAEAIQKSRENILKS 154 >UniRef50_A5CWG8 Cytochrome c-type biogenesis protein ccmE n=5 Tax=Gammaproteobacteria RepID=CCME_VESOH Length = 140 Score = 155 bits (391), Expect = 5e-37, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 9/149 (6%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 +R+NR+ + ++ G++L L L A N+ F +P ++ G+ + R Sbjct: 1 MTKRQNRMVLVALLVIGVSLAGYLGLKAFNENLLYFLSPTDVTKGRA------PKDKDFR 54 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GGM++ S++ + +KV F + D + V+Y GILPDLF+EGQGV+ G L Sbjct: 55 LGGMIVKDSIKH--DGIKVVFDVTDYSNTFRVNYSGILPDLFKEGQGVITTGSLV-DGVF 111 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRP 150 +A EVLAKHDENY PPEV A+E + Sbjct: 112 MATEVLAKHDENYMPPEVADALEKAKNKQ 140 >UniRef50_Q478K9 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Betaproteobacteria RepID=CCME_DECAR Length = 153 Score = 154 bits (390), Expect = 6e-37, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 78/134 (58%), Gaps = 6/134 (4%) Query: 26 VLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIY 85 VL AL SNI L+ +P ++ GK G+ R+GG+V GS+QR + + + F + Sbjct: 25 VLNALNSNIALYISPTDVAEGKA------PQGKAFRIGGLVKEGSLQRQADGVTIAFVVT 78 Query: 86 DAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEA 145 D + V Y+GILPDLF+EG+GVV QG++ A EVLAKHDENY PPE KA+ Sbjct: 79 DTAKDMTVHYKGILPDLFKEGKGVVAQGKMAADGTFTASEVLAKHDENYMPPEAAKAVGD 138 Query: 146 NHRRPASVYKDPAS 159 + A K AS Sbjct: 139 AQAKSAGAEKPKAS 152 >UniRef50_D2MJF2 CcmE/CycJ protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJF2_9BACT Length = 151 Score = 154 bits (390), Expect = 7e-37, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 6/142 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M +K I +L G AL L L N+ F+TP E+ + +++ Sbjct: 1 MMPGKKKVGMIISILLVGGALA-YLALGNFGENVVYFFTPSEVKAFSTDY-----YQKKV 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGGMV+ GS++ P+ L +TF + D E ++ V++EGI PDLF+EGQG VV+G + Sbjct: 55 RVGGMVVEGSMETYPDRLGLTFQLTDGEATIPVTFEGIPPDLFKEGQGAVVEGYWTGEHR 114 Query: 121 ILAKEVLAKHDENYTPPEVEKA 142 + ++AKH E+Y P E+++A Sbjct: 115 FESNLIMAKHSEDYMPIELKRA 136 >UniRef50_Q96326 G1p n=8 Tax=Magnoliophyta RepID=Q96326_ARATH Length = 256 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 25/165 (15%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 + RLW + +A + +VL + + + TP + + E + R+GG Sbjct: 80 QNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYLTPSDAMEKFAE----NPTKNKFRLGG 135 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEK------- 117 +V+ GSV + S ++ F I D + V Y+G LPDLFREG VVV+G ++ Sbjct: 136 LVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDLFREGHSVVVEGFIKPYTDEVRK 195 Query: 118 --------------GNHILAKEVLAKHDENYTPPEVEKAMEANHR 148 A EVLAKHDE Y P EV A+E N + Sbjct: 196 EVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAAAIEKNKK 240 >UniRef50_Q87BH5 Cytochrome c-type biogenesis protein ccmE n=7 Tax=Xylella fastidiosa RepID=CCME_XYLFT Length = 153 Score = 151 bits (381), Expect = 7e-36, Method: Composition-based stats. Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 9/144 (6%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN RR RLW ++ + L + ALR N+ Y P E+L G Sbjct: 1 MNARR--RLWSVLMLILAVGTAATLTIMALRHNLTYLYMPSEVLRG------DTAQQTHF 52 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GS QR +L F + D + V Y ILPDLFREGQ +V G++ + Sbjct: 53 RLGGIVEKGSFQRTSGTLNTRFIVTDGNARLQVRYARILPDLFREGQAIVATGQM-QHGT 111 Query: 121 ILAKEVLAKHDENYTPPEVEKAME 144 +A+ +LA+H+E YTP ++ M+ Sbjct: 112 FIAENILARHNETYTPRQLANKMQ 135 >UniRef50_Q0A805 Cytochrome c-type biogenesis protein ccmE n=18 Tax=Proteobacteria RepID=CCME_ALHEH Length = 158 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 7/152 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R RL + VL GL L+ GL L A + N+ F+TP E++ + + + + Sbjct: 1 MKPR-HRRLTLIALVLGGLGLSAGLALTAFQDNLVFFFTPSEVMAREA------PIDRPI 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG+V GSV+R+ S +V F + D S+ VSY+GILPDLFREGQGVV QG L Sbjct: 54 RIGGLVKAGSVEREAASARVHFKVTDTAESITVSYDGILPDLFREGQGVVAQGRLGADGR 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPAS 152 A +VLA+HDE Y P E ++A++ + + Sbjct: 114 FHATQVLARHDETYMPAEAKEALDRIGQGNGT 145 >UniRef50_Q4FNY3 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Candidatus Pelagibacter RepID=CCME_PELUB Length = 139 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 86/146 (58%), Gaps = 9/146 (6%) Query: 1 MNIRR-KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQR 59 M ++ K R +LA + LT+ LVL +L+ N+ F +P EI + ++ Sbjct: 1 MYGKKVKLRFIFLALILASVILTVFLVLQSLKENVVYFQSPSEIKSLIELNK------KK 54 Query: 60 LRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 +RVGGMV S+ D + KV F I D + +++ Y G +P+LF EG+GVV +G L+ N Sbjct: 55 IRVGGMVKEQSIFIDSD--KVNFVITDFKNEINIVYTGAVPNLFAEGKGVVAEGFLKDKN 112 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEA 145 + A ++LAKHDENY PPEV++A+ Sbjct: 113 YFTATKILAKHDENYMPPEVKEALGD 138 >UniRef50_B9GW99 Predicted protein (Fragment) n=2 Tax=Embryophyta RepID=B9GW99_POPTR Length = 200 Score = 147 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 25/165 (15%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 + RLW + +A I +VL + + + TP + + + + R+GG Sbjct: 36 QNRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYITPSDAVEKFKN----NPSKNKFRLGG 91 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEK------- 117 +V+ GSV S ++ F + D + V YEG LPDLFREG VVV+G +++ Sbjct: 92 LVLEGSVVHPLTSPEMEFVVTDLITDILVKYEGSLPDLFREGHSVVVEGFMKELDDKVRK 151 Query: 118 --------------GNHILAKEVLAKHDENYTPPEVEKAMEANHR 148 + A +VLAKHDE Y P EV A+E N + Sbjct: 152 EVGLKNVSGKARSGECYFKAFDVLAKHDEKYMPQEVAAAIERNKK 196 >UniRef50_Q2G8J0 Cytochrome c-type biogenesis protein ccmE n=7 Tax=Sphingomonadales RepID=CCME_NOVAD Length = 156 Score = 147 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 7/144 (4%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 + RL + L L L YAL + FY P +++ PE G+ +R+GG Sbjct: 13 KHQRLVLLVIALVALIGAGLLAAYALSNQASYFYVPNDLVKNP------PEQGRAIRLGG 66 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 MV GS++ + + + F + D + V V Y GI PDLF EG GVV +G + +G +A Sbjct: 67 MVQKGSLKTRADGITIDFVVGDGKARVPVRYTGITPDLFVEGSGVVAEGRM-EGQTFVAD 125 Query: 125 EVLAKHDENYTPPEVEKAMEANHR 148 +LAKHDENY P ++ +A Sbjct: 126 NLLAKHDENYVPRQMGDMTKAQAE 149 >UniRef50_Q5SIG4 Cytochrome c-type biogenesis protein ccmE n=4 Tax=Thermaceae RepID=CCME_THET8 Length = 142 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 6/143 (4%) Query: 12 ACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSV 71 +L L +V L N+ F TP E L + Q + +R+GG+V PG+V Sbjct: 6 LLGILVILGALGYMVFGGLGRNLVYFLTPSEYLQDQARYQ-----NRPVRLGGLVKPGTV 60 Query: 72 QRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHD 131 Q D + L++ F + D V V ++G P +F+EGQGVVV+G ++ +L KH Sbjct: 61 QYDKDRLELRFVLTDGVAEVPVFHKGTPPGMFKEGQGVVVEGRFQE-GVFQGTNLLVKHS 119 Query: 132 ENYTPPEVEKAMEANHRRPASVY 154 E Y PP+ E + Sbjct: 120 ETYQPPKEGWTPEEVRKLIEEAQ 142 >UniRef50_Q5NN30 Cytochrome c-type biogenesis protein ccmE n=3 Tax=Zymomonas mobilis RepID=CCME_ZYMMO Length = 146 Score = 144 bits (363), Expect = 9e-34, Method: Composition-based stats. Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 6/136 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 + RL + LA + L L A + F+TP + + + +R Sbjct: 1 MQAKHQRLILGIIALAAVIAAGFLALVAFKKQAAYFFTPTDAVKA------HLPANRNIR 54 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GGMV GS+ R+ + + + F + D + VSY GI+PDLFREG GVV G + Sbjct: 55 LGGMVERGSLIREKDGVTIHFRVTDGYQKIAVSYRGIVPDLFREGSGVVADGHFDPSGSF 114 Query: 122 LAKEVLAKHDENYTPP 137 A+ +LAKHDE Y PP Sbjct: 115 TAETILAKHDERYMPP 130 >UniRef50_C8N960 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N960_9GAMM Length = 151 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 6/156 (3%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R RL + + A A + L+LYA++++++ +Y+ + P + Sbjct: 1 MTPARTKRLTLISLIFAAFAAAVALLLYAMQNDLNHYYSLQSVAEKAV-----PLEQPGI 55 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGS-VDVSYEGILPDLFREGQGVVVQGELEKGN 119 RVGGMV S+ R+ +SL V F I D + + V+Y GILPDLFRE QGV+ +G L Sbjct: 56 RVGGMVEEHSLTREGDSLTVRFRITDFQHPPLAVTYTGILPDLFREKQGVIARGTLGADG 115 Query: 120 HILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYK 155 A E+LAKHDENY PPEV+ M+ + + S K Sbjct: 116 VFRADEILAKHDENYMPPEVQADMQRSGYQHQSQQK 151 >UniRef50_A8PN63 CytoChrome c-type biogenesis protein CcmE (Cytochrome c maturationprotein E) (Heme chaperone ccmE) n=1 Tax=Rickettsiella grylli RepID=A8PN63_9COXI Length = 132 Score = 143 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 81/135 (60%), Gaps = 6/135 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN +K RL ++ + IGL +YAL+ NI+LFYTP +++ + GQ Sbjct: 1 MNGLQKKRLNFVVFLIVISLVVIGLSVYALKQNINLFYTPSQLVR------EHLAQGQLF 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 +GG V G+V++ ++F + DA V V Y+G+LPDLFREGQ VV++G L+K Sbjct: 55 HLGGQVKKGTVKQHGEPGLISFVVSDASHQVLVEYQGVLPDLFREGQSVVIKGSLDKNGI 114 Query: 121 ILAKEVLAKHDENYT 135 + AK+VLAKHDE Y Sbjct: 115 LQAKQVLAKHDERYQ 129 >UniRef50_Q5FHG0 Cytochrome c-type biogenesis protein ccmE n=5 Tax=canis group RepID=CCME_EHRRG Length = 134 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 9/139 (6%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R+ RL++ L+ A ++ VL L++N+ FYTP E+L + +R Sbjct: 1 MKRKYRRLFVVIITLSIFAGSVVFVLGKLKNNVSFFYTPTELLSSSLINR------PNIR 54 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GGMV+ G+VQ+ +S + F I D + + V Y+GILP LF EG +V +G++ Sbjct: 55 IGGMVVKGTVQKYDDS--IVFHITDLKNYIKVVYKGILPPLFSEGSWIVAKGKMVN-GKF 111 Query: 122 LAKEVLAKHDENYTPPEVE 140 +A E+LAKHDENY P + + Sbjct: 112 IASEILAKHDENYMPNKYK 130 >UniRef50_Q2GKI0 Cytochrome c-type biogenesis protein ccmE n=6 Tax=Anaplasma RepID=CCME_ANAPZ Length = 141 Score = 142 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R+ R+ L VL+ L +I F TP E++ ++ + P +R Sbjct: 1 MQRKHKRILFVAVSFIALGCVSAFVLFELSKSISFFCTPTELVADPIKSSRYP-----IR 55 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 VGGM++ GS+ R +S VTF+I D ++V+Y G+LP +F E G + +G Sbjct: 56 VGGMIVKGSIVRHGDS--VTFSITDLGTELEVTYRGVLPPMFGEDVGAIAKGRFV-DGVF 112 Query: 122 LAKEVLAKHDENYTPPE 138 +A+E+LAKHDE Y P + Sbjct: 113 IAEELLAKHDEKYMPKK 129 >UniRef50_A9IR17 Cytochrome c-type biogenesis protein ccmE n=5 Tax=Bartonella RepID=CCME_BART1 Length = 159 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 7/145 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 + R+K RL I +A+ LV+YA+R + F P EI T++ G+ L Sbjct: 16 LKQRKKKRLLIILLCCLVMAIAASLVVYAMRHAVSFFRMPSEI------TREDILTGRPL 69 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GG V G+V+ S V F + D + V + G LPDLFREGQGV+V+G +K Sbjct: 70 RLGGFVEKGTVRYVGES-GVIFFVTDNKKHEKVVFNGALPDLFREGQGVIVEGHFDKQGF 128 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEA 145 + +LAKHD Y P E ++ Sbjct: 129 FIGTRILAKHDATYMPKETVDRLKK 153 >UniRef50_C0R3Z7 Cytochrome c-type biogenesis protein ccmE n=6 Tax=Wolbachia RepID=CCME_WOLWR Length = 133 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 9/136 (6%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 ++ RL I + L+ + +L L+ NI FYT E + + + +R Sbjct: 1 MKKKHKRLLITSGIFCFLSCIVFFILTTLKENISFFYTVSEAI-------VLQNSQKLIR 53 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 VGGMV+ SV R +V F + D SV V Y+GILP +F E GVVVQG++ + Sbjct: 54 VGGMVVENSVIRSE--SEVIFQMTDFNKSVVVKYQGILPPMFSEKSGVVVQGKMFDNSTF 111 Query: 122 LAKEVLAKHDENYTPP 137 LA V AKHDENY P Sbjct: 112 LADTVFAKHDENYMPK 127 >UniRef50_Q5LL36 Cytochrome c-type biogenesis protein ccmE 2 n=1 Tax=Ruegeria pomeroyi RepID=CCME2_SILPO Length = 139 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 50/138 (36%), Positives = 71/138 (51%), Gaps = 9/138 (6%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 ++ R+ + L L+ YA+R I F TP E+ P + LR+G Sbjct: 5 KKSRRVRLILFSGVALVSATALIGYAMRDGIQFFRTPTEV------ATDPPAANEVLRIG 58 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 GMV GS+ R + +F + D E S +SY GI+PDLFREG+G + G + G A Sbjct: 59 GMVEHGSLVR--DGANFSFRVTDGETSFPISYVGIVPDLFREGEGTIATGSVI-GGVFRA 115 Query: 124 KEVLAKHDENYTPPEVEK 141 E+LAKHDE Y P E+ + Sbjct: 116 TEILAKHDEVYMPSELAE 133 >UniRef50_B5J4A6 Cytochrome c-type biogenesis protein CcmE n=4 Tax=Rhodobacteraceae RepID=B5J4A6_9RHOB Length = 163 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 8/145 (5%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 N+++ R + +A ++ + F +P E++ + P+ + R Sbjct: 6 NLKKTRRKQVLVVSFVAIAGVFVILALLPNDSFQFFRSPTEVV------TEPPKETELFR 59 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GGMV GS+ R L+V+F + D V V++ ILP LF EGQG+V QG Sbjct: 60 IGGMVQDGSIVR-GEGLEVSFIVTDCWNIVPVTFNDILPSLFEEGQGMVGQGHYIN-GTF 117 Query: 122 LAKEVLAKHDENYTPPEVEKAMEAN 146 A E+LAKHDE Y P EV EA Sbjct: 118 EAVEILAKHDETYMPAEVVNMQEAQ 142 >UniRef50_C6XIM0 CcmE/CycJ protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIM0_HIRBI Length = 155 Score = 137 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 6/140 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R R W+ L + LV+ AL N TP EI+ G T VG+R+R Sbjct: 1 MRARSQRAWLIGVAGVLLVGAVALVMSALGDNASYSRTPTEIVTGNVVT-----VGERVR 55 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 +GG+V S++R P +L + F I D E V+V+Y+ + PDLF EGQG+V +G ++ + Sbjct: 56 IGGLVGVDSIERGPGTL-IKFEITDGEYGVNVAYDDLPPDLFEEGQGIVAEGIIQVDGSL 114 Query: 122 LAKEVLAKHDENYTPPEVEK 141 A ++A+HDE+Y P E Sbjct: 115 QATRLVARHDESYMPKEAYD 134 >UniRef50_C1A6K1 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6K1_GEMAT Length = 151 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 11/159 (6%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M R K + L L+ ++ + TP E+ + T V + Sbjct: 1 MKARNK----FLLGGVLVLGTAGYLMASSIDETATYYLTPSEL--AGKVTANPRFVQNGV 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 +VG V+ G++ R P ++TF + D + DV Y G++PD F +G VVV+G L+ Sbjct: 55 KVGARVVSGTIVRQPGGRELTFKMTDGAHTYDVHYRGLIPDTFTDGVDVVVEGRLDATGT 114 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS 159 A +LAK Y E A E + P A+ Sbjct: 115 FQATTLLAKCASRY-----ENAPEKYQQTPGYQQGTAAT 148 >UniRef50_A8LMF5 Cytochrome c-type biogenesis protein ccmE n=36 Tax=Rhodobacterales RepID=CCME_DINSH Length = 160 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 13/156 (8%) Query: 4 RRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVG 63 ++K R+ I L + ++ A+R I+ F +P E+ P + R+G Sbjct: 5 KKKRRIQIIAIAAVALTIATIMIGTAMRDGINFFRSPSEVAEAP------PPESEVFRIG 58 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 G+V G++ R S TF + D S+ VSY G+LPDLF E +G V G ++ +A Sbjct: 59 GLVEEGTLVR-GESETTTFMVTDGGASIPVSYTGVLPDLFGENEGTVALGSMQN-GVFMA 116 Query: 124 KEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS 159 EVLA+HDE Y P EV A++ VYKDP + Sbjct: 117 TEVLARHDETYMPKEVVDALKEQG-----VYKDPNA 147 >UniRef50_A8GWM8 Cytochrome c-type biogenesis protein ccmE n=15 Tax=Rickettsia RepID=CCME_RICB8 Length = 137 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 10/137 (7%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M KNRL + + ++LY L +I F P +I E G+ L Sbjct: 1 MQKGAKNRLITIIICFCSAVIGVSIILYNLEKSIVFFVPPSKI--------NEVEQGKEL 52 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGG+V S+ + + K++F I D +++ Y+G+LP LFRE QG++ G L Sbjct: 53 RVGGLVKVDSINKIA-ADKISFVITDNIKDLEIFYQGVLPALFRENQGIIAIGRLSN-GK 110 Query: 121 ILAKEVLAKHDENYTPP 137 +A+E+LAKHDENY PP Sbjct: 111 FIARELLAKHDENYRPP 127 >UniRef50_C1D1H5 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Deinococcus deserti VCD115 RepID=CCME_DEIDV Length = 158 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 8/143 (5%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 R++N L + A L L + L +++ F TP E + + G+ +R+ Sbjct: 18 RRKRNPLPTVLGITALLGLAGFIAFGNLNKSLEYFVTPTEYQQQAAQLK-----GRPVRI 72 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GG+V V+ +P SL+++FT+ D S V Y G + DLF+E QGVVV+GE +G Sbjct: 73 GGLVKA--VKYNPQSLELSFTVTDGGASFPVRYRGAVSDLFKENQGVVVRGEF-EGQTFQ 129 Query: 123 AKEVLAKHDENYTPPEVEKAMEA 145 A+E++ KH E Y P+ + + Sbjct: 130 ARELIVKHSEQYDVPKTQAELRD 152 >UniRef50_Q1D7C0 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Cystobacterineae RepID=Q1D7C0_MYXXD Length = 158 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 9/162 (5%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ +NRL A+L A + + N+ +++P E+L + + Sbjct: 1 MSPVARNRLIALGALLVAGAGLGFVAFGNIGENLVYYWSPSEMLGQGDKAYSA-----TI 55 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYD----AEGSVDVSYEGILPDLFREGQGVVVQGELE 116 R+GG+V GS+Q + + F + D SV V P +FR+ GVVV+G + Sbjct: 56 RLGGVVEAGSIQWNAEHTTLQFRVADDVKEGAPSVLVRATETPPQMFRDKIGVVVEGTYD 115 Query: 117 KGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPA 158 K + ++ H Y P+ + + A Sbjct: 116 KSGVFSSNRLMVNHSNEYRAPKEGEDPRQWQETLSDATAMGA 157 >UniRef50_Q1IYZ2 CcmE/CycJ protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IYZ2_DEIGD Length = 155 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 8/142 (5%) Query: 11 IACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGS 70 + VLA + LT + L +++ F TP E L + E G+ LR+GG+V Sbjct: 20 VVLGVLALVGLTAFIAFGNLGKSLEYFVTPTEYLQERAE-----LEGRPLRIGGLVKD-- 72 Query: 71 VQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKH 130 VQ +P +L + F + D + V Y G + DLF+E QGVVV+G +GN A E++ KH Sbjct: 73 VQYNPQTLDLKFNVTDGGATFPVQYHGAVSDLFKENQGVVVRGTF-QGNTFHATELVVKH 131 Query: 131 DENYTPPEVEKAMEANHRRPAS 152 E Y P+ + ++ + S Sbjct: 132 SEEYQVPKTQADLKRLLQENQS 153 >UniRef50_A1SI32 CcmE/CycJ protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SI32_NOCSJ Length = 154 Score = 131 bits (330), Expect = 6e-30, Method: Composition-based stats. Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 7/141 (4%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 R RL + V L + + L + + TP E++ G + E+ QR+R+ Sbjct: 21 RRGSTRLRVVVCVAIILGALGWIAVRGLTGSFVYYLTPTEVVSGGQA-----EISQRIRL 75 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 GG V PGSV RD L FT+ D E S+ V G +P LFR GQGVV++G L Sbjct: 76 GGYVEPGSVTRDDQGLT--FTVSDGEESIRVVSTGSVPQLFRAGQGVVLEGALGADRLFH 133 Query: 123 AKEVLAKHDENYTPPEVEKAM 143 A +L KHD Y P+ K Sbjct: 134 ADTLLVKHDGEYRAPDPTKGP 154 >UniRef50_B4SPY3 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Stenotrophomonas maltophilia RepID=CCME_STRM5 Length = 153 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 75/157 (47%), Gaps = 7/157 (4%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M ++ RL L L LV AL NI YTP E+L G + Q R Sbjct: 1 MTPVQRRRLVWVLLALLASGLATALVAMALERNIAYLYTPSEVLRGDVDAQS------RF 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+GGMV+ GS R SL+ F + D + + V+ ILPD+F EG VV G L + Sbjct: 55 RLGGMVVKGSFNRPVGSLEARFEVTDGDAQLAVTTSRILPDMFAEGTAVVASGRL-QDGI 113 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDP 157 +A EVLAKHDE Y P EV M HR+ P Sbjct: 114 FVADEVLAKHDEKYVPKEVADKMGDAHRKHDVPVTAP 150 >UniRef50_D2VQC0 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VQC0_NAEGR Length = 309 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 72/141 (51%), Gaps = 5/141 (3%) Query: 12 ACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSV 71 + ++ I +++ ++ + +P +++ +++ +++R+GG+V G++ Sbjct: 153 YSIIFTIASVVIYIIVETNNDRMNYYVSPSKVMDNRQDF----PPDRKIRIGGIVKEGTI 208 Query: 72 QRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHD 131 Q N+ F I D + +++ Y+G+LPDLF E + +G + + + +LAKHD Sbjct: 209 QHGENNFLTIFKITDLKYDIEIEYKGVLPDLFEENSTAICEGFMLGHSKLKCTNILAKHD 268 Query: 132 E-NYTPPEVEKAMEANHRRPA 151 + N PPE+ +E N R Sbjct: 269 QRNGMPPEIAYEVEKNRREME 289 >UniRef50_B3CU35 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Orientia tsutsugamushi RepID=B3CU35_ORITI Length = 130 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 9/138 (6%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + +R I ++ ++ + L+L A NI FYTP IL +E + G+ Sbjct: 1 MYFKINSRFRIVFLLILSISCGVFLILRAFSQNIIFFYTPTVILSQSKEGVVVRVGGKV- 59 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 GS+ + + F I D + V ++GILP LF+EGQ VV +G + + Sbjct: 60 ------KHGSINKISPNEN-KFIITDNTSELQVYFKGILPPLFKEGQEVVAKGYMNQ-KL 111 Query: 121 ILAKEVLAKHDENYTPPE 138 +A ++LAKHDE Y PPE Sbjct: 112 FIADDLLAKHDERYMPPE 129 >UniRef50_Q0C2L6 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=CCME_HYPNA Length = 141 Score = 127 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 6/140 (4%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R RL+ A + L +ALR N +LFYTP + +P G+ ++ Sbjct: 1 MRARTRRLYTFGIAAALIVAAAALAFFALRENANLFYTPEVLAEKG-----LPREGREVK 55 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAE-GSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 VGG V PGS+ + FT+ D ++ VS+ G+ PDLFREGQGVV G Sbjct: 56 VGGWVEPGSLTYADGGATMRFTVIDNSPSTITVSFNGVAPDLFREGQGVVATGTFTPEGE 115 Query: 121 ILAKEVLAKHDENYTPPEVE 140 A+++LAKHDENY P E++ Sbjct: 116 FTARQLLAKHDENYQPRELK 135 >UniRef50_B8D1Q8 Putative cytochrome c-type biogenesis protein CcmE n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1Q8_HALOH Length = 128 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 62/138 (44%), Gaps = 11/138 (7%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + K + L + + + ++ +YT E + + + Q L Sbjct: 1 MKTKTK----VIILTLIIVLVVSYTTYISFNNSATYYYTISE-------ARGLEGIRQHL 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R+ G ++ SV+ P+ ++ FT+ D + ++ + Y G++PD F+ + V+V+G+ + + Sbjct: 50 RIKGNLIKDSVKWSPDLSELKFTLTDGQHNLKMIYSGVVPDNFKHSREVIVEGKFIENDV 109 Query: 121 ILAKEVLAKHDENYTPPE 138 +++ + Y E Sbjct: 110 FRVTKLMLQCPSKYEKGE 127 >UniRef50_B8DNC7 Cytochrome c-type biogenesis protein CcmE n=10 Tax=Desulfovibrionales RepID=B8DNC7_DESVM Length = 140 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ + L++ L L LV N F E L E Q + Sbjct: 1 MSKKNGKSLYLVALAL-FLGGVGYLVFSGFSQNSVYFLNVSEALAMPSEKL------QSI 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEG---SVDVSYEGILPDLFREGQGVVVQGELEK 117 R+ G V P + R + V F + D + +V V Y G +PD F+EG V+V+G + + Sbjct: 54 RMFGTVAPEGIARLDDGPGVRFLLEDKDNPGQTVRVMYRGAVPDTFKEGVEVIVEGGMPQ 113 Query: 118 GN---HILAKEVLAKHDENY 134 G AK ++ K Y Sbjct: 114 GGAASEFRAKTLMTKCPSKY 133 >UniRef50_D1CC97 CcmE/CycJ protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CC97_THET1 Length = 146 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 11/136 (8%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R+ L + L A + LV+ +N + E+ G ++RV G Sbjct: 18 RRRNLGLLVVGLVAAAAILYLVVSNFSANTVYYLKVSELQSS--------YHGGQVRVSG 69 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 V+PGS+ R + K++FT YD G + V Y+G++PD+F++ VVV+G + G A Sbjct: 70 KVLPGSISRQGD--KLSFTAYDGSGRMRVEYQGVVPDIFKDNADVVVEGTYD-GQVFHAH 126 Query: 125 EVLAKHDENYTPPEVE 140 +LAK + + Sbjct: 127 TLLAKCPSKFQSKPSQ 142 >UniRef50_C7LS40 Cytochrome c-type biogenesis protein CcmE n=3 Tax=Desulfovibrionales RepID=C7LS40_DESBD Length = 153 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 15/157 (9%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ + + AVL A L+ L N F E L E Sbjct: 7 MSTAKNQKWVYLVAVLLVGAGVGYLLFSGLSQNSVYFLNVSEALAMPAEKLSQA------ 60 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDA---EGSVDVSYEGILPDLFREGQGVVVQGELEK 117 R+ GMV ++ DP+++ V+F D ++ V Y G +PD F+ G V+++G Sbjct: 61 RLFGMVAEKDIEHDPSAMGVSFYALDKDDPGKAIRVHYRGAVPDTFKAGVEVILEGSFTA 120 Query: 118 GN-HILAKEVLAKHDENYTPPEVEKAMEANHRRPASV 153 A +L K Y EK + R P S Sbjct: 121 DTRVFEATTLLTKCPSKY-----EKNEKGQMRPPGSA 152 >UniRef50_D1C3N4 CcmE/CycJ protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3N4_SPHTD Length = 150 Score = 122 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 7/142 (4%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYAL--RSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 R LAL +G ++Y + F T GE+ + Q G R+ Sbjct: 14 RRAPWLNTKILVAGVVLALAVGFLIYNSMQGTAAAYFVTVGEL-----QAQADKVDGTRV 68 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RVGG V+PGS+Q + F + D ++DV Y ++PD+F + V+V+G KG Sbjct: 69 RVGGDVVPGSIQMGGPGEPIRFQVTDGTHTMDVVYREVVPDIFSDHVQVIVEGTFHKGQE 128 Query: 121 ILAKEVLAKHDENYTPPEVEKA 142 A +L K + + + Sbjct: 129 FQADTLLTKCPSRFEAAQPTDS 150 >UniRef50_C1XMN8 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMN8_MEIRU Length = 145 Score = 121 bits (304), Expect = 6e-27, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 24 GLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFT 83 L+ L N+ F TP E Q + +R+GG+V PG++ +P +L++ F Sbjct: 20 YLIFGGLGQNLVYFITPSEYFQ-----QVDRYQNRPVRLGGLVKPGTLDYNPQTLELRFV 74 Query: 84 IYDAEGSVDVSYEGILPD-LFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKA 142 + D + + G P LF E +GVVV+G +G +++ +L KH E Y P+ Sbjct: 75 VTDGVKEIPIRSSGTTPPALFGENRGVVVEGRF-EGETFVSQNLLVKHSETYQAPKEGWT 133 Query: 143 MEANHR 148 E + Sbjct: 134 PEQVRK 139 >UniRef50_B9L1G4 Cytochrome c-type biogenesis protein CycJ n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1G4_THERP Length = 148 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 8/141 (5%) Query: 5 RKNRL--WIACAVLAGLALTIGLVLYAL-RSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 R+ RL + L L+ L + F T E+ E G+R+R Sbjct: 12 RRIRLDVRLLVLALVMAGAVGYLMYTGLQGTAASYFVTVSELQARASEVD-----GRRVR 66 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHI 121 VGG V+ GS+ R + F I D ++V Y G+LPD+F EG+ V+V+G G + Sbjct: 67 VGGDVVTGSIVRGGPGEPIHFRIGDGTSELEVVYSGVLPDIFAEGRHVIVEGLYRNGQPV 126 Query: 122 LAKEVLAKHDENYTPPEVEKA 142 A VL + + + Sbjct: 127 QADSVLTQCPSRFEAAPTASS 147 >UniRef50_Q311W9 Cytochrome c-type biogenesis protein CcmE n=2 Tax=Desulfovibrionaceae RepID=Q311W9_DESDG Length = 137 Score = 119 bits (299), Expect = 2e-26, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLR 61 ++ ++ A+L + L+ L N F E L + R Sbjct: 1 MPKKNSKTIYIAALLLFVGGVGYLLFSGLSQNSVYFLNVSEALAMPSGDL------KSAR 54 Query: 62 VGGMVMPGSVQRDPNSLKVTFTIYDAEG---SVDVSYEGILPDLFREGQGVVVQGELEKG 118 + G V +QR L V F I D + ++ V Y+G +PD F+ G V+++G + Sbjct: 55 LFGTVKAEGLQRIDEGLGVRFQIEDKDNKTRTMWVEYKGAVPDTFKPGAEVIIEGGVAPQ 114 Query: 119 -NHILAKEVLAKHDENYT 135 A+ ++ K Y Sbjct: 115 TQMFAARTLMTKCPSKYQ 132 >UniRef50_Q2GCU8 Cytochrome c-type biogenesis protein ccmE n=2 Tax=Neorickettsia RepID=CCME_NEOSM Length = 135 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 12/138 (8%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + R R W + + + L+L+ L +I FY P ++ ++ + + Sbjct: 1 MLLLRWKRFWFLSLGILLFSGVVSLMLFNLSESISFFYLPSDV-------ARVVASNREI 53 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 +VGG++ +++ + V F + D ++V YEGILP L ++G VVV +G Sbjct: 54 KVGGIIKA--IKKSKDG--VRFLLSDGAAEIEVLYEGILPSLVQDGINVVVVARF-EGGL 108 Query: 121 ILAKEVLAKHDENYTPPE 138 +LAK VL KHDE Y PPE Sbjct: 109 LLAKRVLVKHDERYYPPE 126 >UniRef50_A3VRG5 Cytochrome c-type biogenesis transmembrane protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VRG5_9PROT Length = 158 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 66/136 (48%), Gaps = 7/136 (5%) Query: 13 CAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQ 72 VL A L L AL FY P + + + +R+GG+V GS+ Sbjct: 20 GIVLPAFAGATALALTALSRTQVYFYGPSALPSPQM------LGDREVRLGGLVEKGSLS 73 Query: 73 RDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDE 132 R V+FT+ D +V V ++G LP L EG GV+ QG L +A+ VLA+HDE Sbjct: 74 R-GEGTTVSFTVSDGVAAVPVEFDGSLPALVAEGDGVIAQGTLNDQGIFIAETVLARHDE 132 Query: 133 NYTPPEVEKAMEANHR 148 NY PEV A++A Sbjct: 133 NYMAPEVADALKATGE 148 >UniRef50_C1SLI4 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLI4_9BACT Length = 134 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 9/137 (6%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 +++ + A V A L++ S + E+L+ + + + +RV Sbjct: 1 MKKSWKFLFAAVVFA--GAIGYLLVSGFSSESVYYLEVSEVLHNPEKFNK-----KGMRV 53 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGS-VDVSYEGILPDLFREGQGVVVQGELEKG-NH 120 G V+ G++ +D + F I D G + V Y GI+PD F+E V+++G ++ + Sbjct: 54 SGDVVTGTIVKDFKKQYLEFDIADTSGQAMKVIYNGIIPDTFKEDIQVIIEGRFDQDADV 113 Query: 121 ILAKEVLAKHDENYTPP 137 A VL K Y Sbjct: 114 FNAATVLTKCPSKYEAD 130 >UniRef50_D1J8Y7 Putative cytochrome c-type biogenesis protein n=1 Tax=uncultured archaeon RepID=D1J8Y7_9ARCH Length = 123 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 7/124 (5%) Query: 11 IACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGS 70 + V + ++ L S ++ + T EI +G+ +++ + GS Sbjct: 6 VYIIVALLIVVSAILAFDTFSSYVNPYSTVSEI------AGDDSYIGREVQILANITKGS 59 Query: 71 VQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKH 130 ++ + + F I D E ++ V+Y G+ P F + Q VV G H+ A ++L K Sbjct: 60 IEWGDDGSLL-FNITDGEATIAVTYTGVPPQSFTDRQRVVAIGVPTTPYHMNATQLLVKC 118 Query: 131 DENY 134 Y Sbjct: 119 PSKY 122 >UniRef50_Q01YS2 Cytochrome c-type biogenesis protein, CcmE-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YS2_SOLUE Length = 148 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 9/143 (6%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 K A ++ + + L ++ N + T E+ G R RVGG Sbjct: 2 KKYGKFAALIVVVIGTLVWLATAGMKENQTYYKTIVELSQMG-----DRAYGARTRVGGD 56 Query: 66 VMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEG--ILPDLFREGQGVVVQGELEKGNHILA 123 V GS+QR +V F + + V+Y G LPD F++G + G+L+K A Sbjct: 57 VEAGSIQRV--GNQVQFVLVQDTTKLKVAYTGSDPLPDTFKDGAQALADGKLDKDGVFRA 114 Query: 124 KEVLAKHDENYTPPEVEKAMEAN 146 + AK Y + A N Sbjct: 115 ARIQAKCASKYEAKPGQLAPGKN 137 >UniRef50_Q1IP94 Cytochrome c-type biogenesis protein, CcmE-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP94_ACIBL Length = 153 Score = 111 bits (277), Expect = 8e-24, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 11/153 (7%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSN--IDLFYTPGEILYGKRETQQMPEVGQ 58 M+ R+ + A A++ L L + R + T EI +T + Sbjct: 1 MSERKPSYTRFALAIVFVLVPIGYLAVTGARDKDIASYYKTIQEI-----QTMGPEVYEK 55 Query: 59 RLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEG--ILPDLFREGQGVVVQGELE 116 RLRV G V GS++R +V FT+ + +++VSY G PD F++ + +G++ Sbjct: 56 RLRVAGTVAEGSIKR--QGTRVEFTLEEQGKTLNVSYIGTEAPPDTFKDKSQALAEGKMG 113 Query: 117 KGNHILAKEVLAKHDENYTPPEVEKAMEANHRR 149 + A+++ AK Y P + + Sbjct: 114 RDGVFHAQKIQAKCASKYAPKQDGTTPTNTAQS 146 >UniRef50_Q9RXG6 Cytochrome c-type biogenesis protein ccmE n=1 Tax=Deinococcus radiodurans RepID=CCME_DEIRA Length = 168 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 8/128 (6%) Query: 11 IACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGS 70 + A A L L +VL SN+ + P E + G+ LR+GG+ Sbjct: 26 LLVAGAAVLGLIGYMVLGNANSNLVYYVLPSEYQQDTAKF-----AGKTLRMGGLAKD-- 78 Query: 71 VQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKH 130 V + ++L + F + D + + V Y+G +PD+FR VV++G++++ K +L KH Sbjct: 79 VVYNRDTLALKFNMTDGQVAYPVQYQGAVPDMFRNDAVVVMEGQMQQ-GVFHGKSLLVKH 137 Query: 131 DENYTPPE 138 E Y + Sbjct: 138 SEEYKAAD 145 >UniRef50_D0MF46 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MF46_RHOM4 Length = 146 Score = 110 bits (275), Expect = 1e-23, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 14/154 (9%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 RL + L +V+ + + + E E VG Sbjct: 2 NKRLMKTIVGVVLLGGFFAMVMLSFGEKVGGYMNFEEAAASGSEAHV---------VGQW 52 Query: 66 VMPGSVQRDPNSLKVTFTIYDAEGSVD-VSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 V V+ DP TF + DA G+V V Y P F + + +VV G + +G+ A+ Sbjct: 53 VRERPVRYDPARNVFTFYMRDAAGTVRRVEYPNPKPANFEDAEQLVVMGRM-RGDVFHAR 111 Query: 125 EVLAKHDENYTPPEVEKAMEANHRRPASVYKDPA 158 E+L K Y +A++ + P+ + PA Sbjct: 112 EILMKCPSKYND---MRALQQQSQPPSDAARMPA 142 >UniRef50_C1F370 Putative cytochrome c-type biogenesis protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F370_ACIC5 Length = 171 Score = 108 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 10/148 (6%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN + + +A A+L L L + A +SN + T E+ + + L Sbjct: 1 MNTKGQTYK-VALAILVILGSIGYLAVSAEQSNKSYYVTIQELQTMGNKA-----YTRHL 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEG--ILPDLFREGQGVVVQGELEKG 118 RV G V+PGS++R FT+Y+ + V Y G PD F+ + G + Sbjct: 55 RVSGQVVPGSIER--QGPNANFTLYEQNRKLRVEYVGEEPPPDTFKGNAPALAVGTFGRD 112 Query: 119 NHILAKEVLAKHDENYTPPEVEKAMEAN 146 A E+ AK +Y P + Sbjct: 113 GVFHATELQAKCASHYAPGKQGAKPGMQ 140 >UniRef50_D0LV11 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LV11_HALO1 Length = 147 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 13/154 (8%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 L +A + + L+ + + ++ + E++ + G+ L+V G Sbjct: 2 TKPLIKVILTIAVVVGGVSLIALSSQGDVQYYKMVDELMVEPGDY-----TGKTLKVHGY 56 Query: 66 VMPGSV--QRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN---H 120 V G++ + + K TF + + + V + G PD F++ VV +G L + N Sbjct: 57 VEAGTIDERIEDQQTKRTFILENKGQRLVVHHLGPKPDTFKDKSEVVAEGRLIQENGTYR 116 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVY 154 + A+E++AK Y E +A ++ +V+ Sbjct: 117 LEAEELMAKCPSKY---EGAEANRNAGQQEPTVF 147 >UniRef50_Q648Q0 Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos37B2 RepID=Q648Q0_9ARCH Length = 131 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 14/134 (10%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ R++ +A + + G+ + T E+ +G+ + Sbjct: 1 MDRRQRAIFTLAIIAVVLVVGLWGIPFGNKQ------LTVSEL--------TDEHIGKLV 46 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 RV G V G++ N + FT+ D+ V+VSY P EG V G L N Sbjct: 47 RVNGTVAVGTLHYIDNGSTILFTLTDSLKDVNVSYAEHQPPNLVEGNHAAVTGMLLPNNT 106 Query: 121 ILAKEVLAKHDENY 134 I A +++ K Y Sbjct: 107 ISANQIITKCPSKY 120 >UniRef50_Q2S0I5 Cytochrome c-type biogenesis protein CcmE, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S0I5_SALRD Length = 143 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 13/150 (8%) Query: 10 WIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPG 69 W LAG+ L+ S + + + VG Sbjct: 3 WKTILGLAGMIGFGTLLFVNFGSQVGGYMNFEQAARTGATAHV---------VGTWAEDR 53 Query: 70 SVQRDPNSLKVTFTIYDAEGSVD-VSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLA 128 D TF + D +G+V V Y P F E + VVV+G + +A+ +L Sbjct: 54 PTSYDRMQNVFTFYMRDEDGTVRKVRYNNPKPANFEEAEQVVVEGR-NQDGTFVAENILV 112 Query: 129 KHDENYTPPEV--EKAMEANHRRPASVYKD 156 K Y + +KA ++ P + Sbjct: 113 KCPSKYNDAQGLKQKASRSSQETPPTSSTP 142 >UniRef50_A9GE04 Putative membrane protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GE04_SORC5 Length = 188 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 10/136 (7%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 L + +L + + L L + ++L K G+++RV G Sbjct: 39 SRSLGLLATLLVMVGALVALFLVGFKEAAVYATPVDQLLASK-----DKLAGRKVRVEGE 93 Query: 66 VMPGSVQRDPNSLKVTFTIYDAEGSVDVSY-EGILPDLFRE----GQGVVVQGELEKGNH 120 ++PG++ + + + F I+ + + V Y + ++PD FR+ G V V+G L +G Sbjct: 94 LVPGTLVKRDSPCEYRFQIHGTQAPLPVRYAQCVIPDTFRDVPSGGVQVTVEGTLSQGGD 153 Query: 121 ILAKEVLAKHDENYTP 136 A V+AK Y P Sbjct: 154 FEASLVMAKCTSKYDP 169 >UniRef50_D1H5F6 Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H5F6_VITVI Length = 162 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 1/90 (1%) Query: 66 VMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN-HILAK 124 ++P S +S + F + D + V Y+G LPDLFREG VVV+G ++ G+ + Sbjct: 62 LVPISRSNGAHSPDMEFVVTDLITDILVRYQGALPDLFREGHSVVVEGFVKPGDYYFSGI 121 Query: 125 EVLAKHDENYTPPEVEKAMEANHRRPASVY 154 EVLAKHDE Y P EV +A+E N ++ + Sbjct: 122 EVLAKHDEKYMPKEVAEAIERNKKKLGQGF 151 >UniRef50_C8S810 Putative uncharacterized protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S810_FERPL Length = 122 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 13/131 (9%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 + N + L ++ + L A +SNI + T E++ ++V G Sbjct: 2 KVNVKLVIGVSLIVFSIALAL---AFKSNISPYMTVSEVVRKGEAYN--------VQVNG 50 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 ++P S + P + F + D + + V Y G + ++EG VV G+ K A+ Sbjct: 51 TIVPDSTKYFPENNTRIFLLTDGKEVMKVIYTGAV-SNYQEGIPAVVIGDY-KDGVFYAE 108 Query: 125 EVLAKHDENYT 135 ++L K Y Sbjct: 109 KLLLKCPSKYQ 119 >UniRef50_Q3ACB4 Putative cytochrome c-type biogenesis protein CcmE n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ACB4_CARHZ Length = 137 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 12/143 (8%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN R K I + L + A S+ + ++ + V Q++ Sbjct: 1 MNQRTK----ILVGSGIIVIAIAFLFISAFASSGTSYSL--QVDEAVYKIVYENAVDQKM 54 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIY----DAEGSVDVSYEGILPDLFRE-GQGVVVQGEL 115 R+ G V+PGS+ + +L++ F + + + V Y + PD +VV+G+ Sbjct: 55 RIEGRVLPGSISWNAKALELKFIMIPIKGSEKTQLPVVYNDVKPDNLEHPEAQIVVEGKY 114 Query: 116 EKGNHILAKEVLAKHDENYTPPE 138 + G A +L K Y + Sbjct: 115 D-GKVFQADTLLVKCPSKYEKKQ 136 >UniRef50_A6GFN2 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFN2_9DELT Length = 123 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 6/127 (4%) Query: 18 GLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNS 77 LA LV + + + +++ + + + +V G V+ S+ R + Sbjct: 2 VLAAVAFLVFSSPDEGVLEYVYVDKVVASPDDYGE-----REFKVHGNVVEDSL-RQDEA 55 Query: 78 LKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPP 137 F I + V Y +LPD F EG VV+ G L+ G+ + +KE+ AK Y Sbjct: 56 GDYHFVIEYKGKRLKVVYTDLLPDTFMEGGEVVMTGRLKDGDTLHSKEMTAKCPSKYEEE 115 Query: 138 EVEKAME 144 A + Sbjct: 116 PGAPAKQ 122 >UniRef50_C9KN72 Putative cytochrome c-type biogenesis protein CcmE n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN72_9FIRM Length = 122 Score = 98.1 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 42/128 (32%), Gaps = 12/128 (9%) Query: 13 CAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQ 72 ++ L +G ++ ++ + E ++V G++ + Sbjct: 5 ILLIVLLLAFVGYAGWSFADSVTPYVGIKEAKAATSS---------NVQVKGLLAQDAPA 55 Query: 73 RDPNSLKVTFTIYDA--EGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKH 130 FT+ D + V Y G PD F E +V G + + + ++L K Sbjct: 56 PHMEGDDFVFTLQDEETGEQLLVHYHGTKPDQFDEAHHIVAIGRM-QDGVFSSDKLLIKC 114 Query: 131 DENYTPPE 138 Y + Sbjct: 115 PSKYEQQK 122 >UniRef50_Q8TIK0 Predicted protein n=2 Tax=Methanosarcina RepID=Q8TIK0_METAC Length = 126 Score = 97.7 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 16/138 (11%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN ++K+ L +A L G+ + + + E+L + G+ + Sbjct: 1 MNKKKKSLLAVAFIAGVFLIGLYGV------DSSEGYLAVSELLSDPQGY-----TGKNV 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGS---VDVSYEGILPDLFREGQGVVVQGELEK 117 G+V GS+++ P +F + D + V+Y G LP EG+ V V G + Sbjct: 50 NAVGIVEAGSLEKAPGVT--SFELEDENDENLKIHVNYVGDLPSNLAEGKQVTVSGTMIS 107 Query: 118 GNHILAKEVLAKHDENYT 135 + A +++ YT Sbjct: 108 ESTFEANKIITGCPSKYT 125 >UniRef50_B6GDS2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GDS2_9ACTN Length = 223 Score = 95.4 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 15/148 (10%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN + + RL + ++A L + + + + + G++L G G+++ Sbjct: 1 MNKKAQRRLVVTGGIVAIAMLVVAAIAGSGGAASS--LSVGDLLAGG-------YTGKKV 51 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIY----DAEGSVDVSYEGILPDLFREGQGVVVQGELE 116 +V G V+ S+Q V F I D + V+Y+G LP F G + G +E Sbjct: 52 QVTGSVVADSIQ--SEGASVQFAITPEEGDGSQELLVTYDGALPATFGTGVVAICTGTVE 109 Query: 117 KGNHILAKEVLAKHDENYTPPEVEKAME 144 + E++ K Y E ++ Sbjct: 110 DPLMLNCTEMVTKCPSKYESAEGSLTVK 137 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 3/83 (3%) Query: 43 ILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL 102 + Q VG+ +V G + G V + F I ++V YEG L + Sbjct: 134 LTVKGLLDQAESMVGKETKVCGYI-DGEV--NDAQASYRFAIESQGALLNVVYEGGLDEA 190 Query: 103 FREGQGVVVQGELEKGNHILAKE 125 +G VV+ G L++ + +A E Sbjct: 191 MTDGTAVVLSGHLDEDGNFVATE 213 >UniRef50_UPI0001C321C1 Cytochrome c-type biogenesis protein CcmE-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321C1 Length = 157 Score = 94.7 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 22/150 (14%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ RK R+ + A A + L L+ + + D T G++L R G+ Sbjct: 1 MDPSRKRRIRLVVAATAAMLLASALIYTSFSAGSDE-KTAGQLLESAR-------AGETY 52 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSV--DVSYEGILPDLFREGQGVVVQGELEKG 118 + G V P SV+R+ L F I D V V Y G++PD FREG+GV+++ +L++ Sbjct: 53 TLAGTVAPNSVRREDGVL--WFRILDPHREVSARVRYTGLVPDPFREGRGVMIKVQLDRN 110 Query: 119 N-------HILAKE--VLAKHDENYT-PPE 138 +A++ ++ K + PE Sbjct: 111 GLKSSHDTLFIAEKDSMVTKCPSKFQVAPE 140 >UniRef50_C7M2R0 CcmE/CycJ protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2R0_ACIFD Length = 162 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 13/146 (8%) Query: 2 NIRRKNRLWIACAVLAGLALTIGLVLYALR--SNIDLFYTPGEILYGKRETQQMPEVGQR 59 + RR R + VL L +V+ A+ S ++ + T + L + GQ Sbjct: 19 SARRTRRRMLQSLVLFAAILVALVVVLAMGAKSALEYYLTVPQALAKRA-----TLAGQT 73 Query: 60 LRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 119 R+ G+V+PGS+Q P V F + V G P LF+ VVVQG +G+ Sbjct: 74 FRMEGIVVPGSIQSTPEG--VDFALRYDRAVARVVEIGNPPQLFQPSIPVVVQGHF-EGS 130 Query: 120 HILAKEVLAKHDENYT---PPEVEKA 142 ++ ++ KH +Y P + A Sbjct: 131 TFVSNLIMVKHTSSYVAAHPNRIADA 156 >UniRef50_A8VWW5 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWW5_9BACI Length = 146 Score = 93.1 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 44/101 (43%) Query: 41 GEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILP 100 E+ G+ L GM++ SV D +++++TF I + V + G+ P Sbjct: 32 SEMKIADINANMDTLEGRHLTTEGMLVHDSVGWDADAIELTFDIEYEGHVLSVFFNGVRP 91 Query: 101 DLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEK 141 D F + ++V+G L + + A+ V + Y + + Sbjct: 92 DNFTDDVYIIVRGYLNEEGTLEAEAVQTRCPSTYEGEDPDD 132 >UniRef50_C9LX59 Putative cytochrome c-type biogenesis protein CcmE n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LX59_9FIRM Length = 124 Score = 91.6 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 12/122 (9%) Query: 14 AVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQR 73 + +AL + +A +I + E ++V G++ P + Sbjct: 6 VLFGLIALFVLYAGWAFADSITPYVDIAEA----------RSAHGSVQVKGLLDPDAPAP 55 Query: 74 DPNSLKVTFTIYDAEGS-VDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDE 132 F + D G ++V Y G PD FR +V G K A +L K Sbjct: 56 AQKGKDFVFGLVDESGEKMEVHYHGTEPDQFRSAHHIVAVGSY-KDGAFEADRLLIKCPS 114 Query: 133 NY 134 Y Sbjct: 115 KY 116 >UniRef50_C7MMS9 Cytochrome c-type biogenesis protein CcmE n=3 Tax=Coriobacteriaceae RepID=C7MMS9_CRYCD Length = 223 Score = 91.2 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 15/138 (10%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN + K RL + + + + + L A S T E QR+ Sbjct: 1 MNAKTKRRL-VVVTGIIVMVMVVVLAFVASSSTA---KTVS-----VDEAASGQVSNQRI 51 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEG----SVDVSYEGILPDLFREGQGVVVQGELE 116 +V G V+ S + FTIYD + ++ V+Y+G F + G++ Sbjct: 52 QVTGNVLKDS--YAIEGNTLAFTIYDPDNAEASTLPVTYDGAAASTFGNDVTAICTGKVG 109 Query: 117 KGNHILAKEVLAKHDENY 134 + A E++ K Y Sbjct: 110 DDGVLRATELVTKCPSKY 127 Score = 54.6 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 6/90 (6%) Query: 41 GEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAE---GSVDVSYEG 97 + + V + +RV G V+ GS F + D + ++ V Y+G Sbjct: 132 SALTVSRLVGYDQGIVDKTVRVTGSVVAGSQNAAGQGD--RFVLADTDDPSQTISVIYDG 189 Query: 98 ILPD-LFREGQGVVVQGELEKGNHILAKEV 126 D + +G VV+ G + A ++ Sbjct: 190 AASDAMLADGSQVVLTGNVGSDGKFSATDI 219 >UniRef50_B3QVM9 Cytochrome c-type biogenesis protein CcmE, putative n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVM9_CHLT3 Length = 130 Score = 90.4 bits (223), Expect = 1e-17, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 12/134 (8%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGM 65 K++ + AV+A + + +N + E T G Sbjct: 2 KSKFIVGGAVIAAVLGWLVFTAQEWGANTIGYSNFAEAKSNGALTSVK---------GYW 52 Query: 66 VMPGSVQRDPNSLKVTFTIYDA-EGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAK 124 V + D TF + D ++V Y+ P+ F + +VVQG+ A Sbjct: 53 VKEK--ESDIKVNVFTFYMEDEDGNELEVIYDKGKPNNFEQATSIVVQGKYADDGRFHAN 110 Query: 125 EVLAKHDENYTPPE 138 +L K Y + Sbjct: 111 NILVKCPSKYQSEK 124 >UniRef50_D0WG30 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WG30_9ACTN Length = 282 Score = 90.0 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 56/164 (34%), Gaps = 18/164 (10%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN + K RL + V+ + L + L S T E VG R+ Sbjct: 57 MNTQAKRRLIVVTLVIVAV-LAVILAYIGSSSAA---KTVS-----VAEAADGSLVGTRV 107 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYD----AEGSVDVSYEGILPDLFREGQGVVVQGELE 116 V G V+ S ++ + F IYD +V VSY+G F G + GEL Sbjct: 108 EVTGSVVDNS--YSIDNGVLAFDIYDADANDGATVHVSYDGSAASTFGNGVQAICTGELT 165 Query: 117 KGN---HILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDP 157 ++ E++ K Y + S+ P Sbjct: 166 DEGGTPTVVCTELVTKCPSKYENASEALTVSRLDYYRDSILDKP 209 Score = 48.8 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 5/94 (5%) Query: 37 FYTPGEILY-GKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTI---YDAEGSVD 92 + E L + + + + + ++V G+V PG++++ S + F++ D V Sbjct: 186 YENASEALTVSRLDYYRDSILDKPVKVAGVVKPGTLKKAGES-DIRFSLLDADDQTSEVS 244 Query: 93 VSYEGILPDLFREGQGVVVQGELEKGNHILAKEV 126 V ++G +P+ EG VV+ G L K ++ Sbjct: 245 VKFDGGIPEGIGEGTSVVLTGSLSKDGTFACTDI 278 >UniRef50_Q12WM0 Cytochrome c-type biogenesis protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WM0_METBU Length = 126 Score = 89.3 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 16/137 (11%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MN +RK L I V + G+ + + +I ++ VGQ++ Sbjct: 1 MNKKRKAILTILAIVAVMVIGLWGVDVE------QGYLMVSDITTSPQD-----HVGQKV 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTI---YDAEGSVDVSYEGILPDLFREGQGVVVQGELEK 117 G+V G++ P V+FT+ D E +D+ Y LP EG + + G + Sbjct: 50 STMGLVKNGTLSISPE--MVSFTLVDAEDKEHEIDIEYTADLPANIVEGNSISLTGTMIS 107 Query: 118 GNHILAKEVLAKHDENY 134 + I A++++ Y Sbjct: 108 ESKIEAEQIVIGCPSKY 124 >UniRef50_C4V0J0 Putative uncharacterized protein n=2 Tax=Selenomonas RepID=C4V0J0_9FIRM Length = 124 Score = 88.5 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 14/128 (10%) Query: 16 LAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDP 75 L + IG Y ++ + + + + ++V G + +V Sbjct: 7 LILILGFIGYAGYFFADSVTPYVSVADA----------RAAQRNVQVKG-IPDDTVAPHM 55 Query: 76 NSLKVTFTIYDA--EGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDEN 133 F+I D ++ V Y+G PD F + VV G+ G+ A ++L K Sbjct: 56 EDGHFVFSIADEETGETMLVRYKGAKPDTFDDAYHVVAIGKYT-GDAFAADKLLIKCPSK 114 Query: 134 YTPPEVEK 141 Y + + Sbjct: 115 YEEEKGKA 122 >UniRef50_Q04V20 Cytochrome c-type biogenesis protein CcmE n=6 Tax=Leptospira RepID=Q04V20_LEPBJ Length = 131 Score = 87.3 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 47/139 (33%), Gaps = 16/139 (11%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 MNI+ L + ++ + E+ + Q L Sbjct: 1 MNIK------FTVLAGIILLSLGSIAYFSSKETSYTLLDASELAASPAKYQ-----DNLL 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEG--ILPDLFREGQGVVVQGELEKG 118 RV G V GSV R F + E + V + G +LPD F+EG V G K Sbjct: 50 RVRGFVKLGSVIR--EGKTARFILEFNEKQIPVFFTGETLLPDAFKEGTRARVDG-YIKD 106 Query: 119 NHILAKEVLAKHDENYTPP 137 +++ V AK Y Sbjct: 107 GVLVSDHVEAKCASKYEAD 125 >UniRef50_A1HQT9 Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQT9_9FIRM Length = 122 Score = 86.2 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 16/135 (11%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 R RL+ VL LA T ++ +L +D + G ++V G Sbjct: 2 RSWRLFALAVVLLFLAFTAYMLRGSLTPYVDF--------------AEARRTGSVVQVRG 47 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSV-DVSYEGILPDLFREGQGVVVQGELEKGNHILA 123 ++ + + F ++D +G V Y G P+ +VV G + +A Sbjct: 48 IMASPPAPVAGDDRAIRFWLWDEKGEAAPVVYRGPTPEGLEHADSIVVVGRYGQAG-FIA 106 Query: 124 KEVLAKHDENYTPPE 138 + +L K Y + Sbjct: 107 ERLLVKCPSKYRSQK 121 >UniRef50_C6Y3X0 Putative uncharacterized protein n=2 Tax=Pedobacter RepID=C6Y3X0_PEDHD Length = 136 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 14/126 (11%) Query: 12 ACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSV 71 A L +AL +G L +L ++ + + T E RE M + GM Sbjct: 5 AIIGLITIALCVGF-LVSLSADTNTYSTFTEASKDPREFHVMGYWEKE---KGM------ 54 Query: 72 QRDP--NSLKVTFTIYDAEGSV-DVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLA 128 D ++ + F + D G V V Y G P F + +V+ G++++ A ++L Sbjct: 55 HYDALKDANRFEFFMKDQNGKVNKVVYAGTKPQDFERSEKLVLIGKMDQD-TFYASKILM 113 Query: 129 KHDENY 134 K Y Sbjct: 114 KCPSKY 119 >UniRef50_C7PPB0 Putative uncharacterized protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PPB0_CHIPD Length = 130 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 51/132 (38%), Gaps = 15/132 (11%) Query: 13 CAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMV-MPGSV 71 +L +A+ IG+++ + + G+ +V G + ++ Sbjct: 6 IVLLVLIAVAIGVIVTVAGDFSTY----------ETFATARQKEGKEFQVIGKLDTTKTL 55 Query: 72 QRDP--NSLKVTFTIYDAEGSV-DVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLA 128 + DP ++ + F + D G + V + G P F + + VV+ G++ ++L Sbjct: 56 EYDPVKDANLLRFYVVDKTGEIQPVVFYGTKPTDFEKAESVVLTGKMSN-GEFKCSKILM 114 Query: 129 KHDENYTPPEVE 140 K Y +V Sbjct: 115 KCPSKYKNDQVA 126 >UniRef50_UPI00006CB2D3 hypothetical protein TTHERM_00455200 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB2D3 Length = 195 Score = 81.9 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 13/152 (8%) Query: 5 RKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGG 64 + ++ G A ++ + + + + + + + ++ G Sbjct: 44 QSRAGIFRALLVIGGAHIAATYGGSMFQDKQVTMSVQDYMLS-----DYIKPESKFQIFG 98 Query: 65 MVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGE---LEKGNHI 121 ++ GS + SL+ F I D + ++V Y+GI F+EG+ +V+ L++ + Sbjct: 99 VLKVGSTKMQRGSLETRFVITDFKEEIEVFYKGITKFEFKEGETIVLTAYCPDLKERKKV 158 Query: 122 LAKEVLAKHDENYTPPEVEKAMEANHRRPASV 153 +A + L KH EV+ + + + Sbjct: 159 IAIDYLTKHS-----MEVQDWQSKSGKSRENY 185 >UniRef50_C0GG62 Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GG62_9FIRM Length = 122 Score = 81.2 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 38 YTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSV-DVSYE 96 +T + E + ++V G+ + G+V + +F + D G V+++ Sbjct: 22 FTARSAFESYITFAEAREATRNVQVKGVALEGTVIEH-DLETWSFELEDLAGETQRVTHQ 80 Query: 97 GILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPE 138 G +P E VVV G+ + + +A ++L K Y P E Sbjct: 81 GNMPPNLFEADNVVVVGQFDDND-FVASQILVKCPSKYAPEE 121 >UniRef50_Q28QS7 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Jannaschia sp. CCS1 RepID=Q28QS7_JANSC Length = 90 Score = 81.2 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 R GG+V ++ R +TF + D G+V VSY GIL DL + QG++ GN Sbjct: 20 RNGGLVEERTLMR-GEGSTITFRVTDGCGAVPVSYNGILRDLIAKAQGMIGTRRFIDGN- 77 Query: 121 ILAKEVLAKHDEN 133 +A E+LA+HDE Sbjct: 78 CVATEILARHDET 90 >UniRef50_A9B1R7 Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1R7_HERA2 Length = 133 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 15/111 (13%) Query: 27 LYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYD 86 ++ ++ + E R Q M + G V G+ FT+ D Sbjct: 29 FTSMGDSLTPYVNVTEAKASGRNVQVMGYPQNQ----GTVESGT---------FRFTMRD 75 Query: 87 AEGS-VDVSYEGILPDLFREGQGVVVQGELEK-GNHILAKEVLAKHDENYT 135 G ++V Y P F + VV G ++ +A ++L K Y Sbjct: 76 EMGQPIEVLYRQPKPGNFDQAISVVAIGAFDESQGIFVADDLLVKCPSKYQ 126 >UniRef50_C2FWM8 Cytochrome c family biogenesis protein CcmE n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWM8_9SPHI Length = 139 Score = 80.4 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 49/123 (39%), Gaps = 9/123 (7%) Query: 33 NIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGS-V 91 + + T + K E + + + ++ + ++ +F +YD + + Sbjct: 25 DSSTYSTFTQAKEKKTELYVVGVLNKEKQLH-------YEPTKDANHFSFYMYDNDSTEC 77 Query: 92 DVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPA 151 V + G P + +V+ G++ +GN A ++L K Y ++E A + A Sbjct: 78 QVVFNGAKPQDIERSEQIVLTGKM-EGNIFHASKILMKCPSKYNQDQIEVTESAATPKTA 136 Query: 152 SVY 154 S+ Sbjct: 137 SIQ 139 >UniRef50_O28092 Uncharacterized protein AF_2191 n=1 Tax=Archaeoglobus fulgidus RepID=Y2191_ARCFU Length = 125 Score = 78.5 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 20/120 (16%) Query: 15 VLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRD 74 L L L + L NI + TP +++ + + + VG+ + V G Sbjct: 23 SLIALVSFTALAIIVLYHNISPYLTPSDLIAQG-KAENVQVVGKIVSVNGN--------- 72 Query: 75 PNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENY 134 TF + D + ++ Y G + R VVV G + G + A +VL K Y Sbjct: 73 ------TFQLSDGKNTITAVYNGTVQ---RYDAEVVVVGNWD-GKVLHATKVLQKCHTEY 122 >UniRef50_A0CI93 Chromosome undetermined scaffold_19, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0CI93_PARTE Length = 181 Score = 78.1 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 59/136 (43%), Gaps = 14/136 (10%) Query: 6 KNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRET--QQMPEVGQRLRVG 63 K ++ A +LAG+ ++ I F+ ++++ + + Q + Sbjct: 32 KGSIYRAIGILAGIQISATF--------ISHFFVDKQVIFPVEDYLKNDKIKENQHYSIA 83 Query: 64 GMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGE---LEKGNH 120 G++ PG+++ +L V F + + + + V Y G F+EG+ +V+ L+ N Sbjct: 84 GIIKPGTIEIKRGTLDVKFILTNFDDDITVIYRGETKYEFKEGETIVLTAYTPDLKNKNR 143 Query: 121 ILAKEVLAKHD-ENYT 135 I+ + KH + Y Sbjct: 144 IIGLDYQTKHSMDGYM 159 >UniRef50_A3HVJ6 Cytochrome c-type biogenesis protein CcmE, putative n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVJ6_9SPHI Length = 138 Score = 77.7 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 5/119 (4%) Query: 27 LYALRSNIDL--FYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTI 84 + ++ F T E+ + + G V + + TF + Sbjct: 20 MTSIGDASSYESFSTALEMKQEGDDQPIHVVGQLKKNQAGEVT--GLNVRDDKTSFTFVL 77 Query: 85 YDAEGS-VDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKA 142 D +G+ +V Y +P F + VVV G+ + +A ++L K Y +V+ A Sbjct: 78 VDNDGTEQEVFYNEPVPADFTRSESVVVIGQYKTEEIFIADKILMKCPSKYQETDVQAA 136 >UniRef50_A7NSA9 Putative uncharacterized protein n=6 Tax=Chloroflexaceae RepID=A7NSA9_ROSCS Length = 140 Score = 77.3 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 4/108 (3%) Query: 36 LFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGS-VDVS 94 + + + G+ +++ G + G + R F + D+ G + V Sbjct: 33 YYGLTASYRPYTVSIDEATQSGRSVQLAGYL--GDMGRYDADGNFVFMLQDSTGKMIPVV 90 Query: 95 YEGILPDLFREGQGVVVQGELE-KGNHILAKEVLAKHDENYTPPEVEK 141 Y P F + +V G + LA ++L K Y + Sbjct: 91 YAKPKPSNFEQAVSIVAIGHYDTARGVFLADDLLVKCPSKYQEMQSAA 138 >UniRef50_Q3IRX9 Cytochrome c-type biogenesis protein n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IRX9_NATPD Length = 152 Score = 73.5 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 17/138 (12%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M+ R K A G+A+ + ++ F TP ++ + + Sbjct: 1 MDRRTK-----AVVGGVGIAVLLAILATTTMGAAAEFVTPTDLEE------DDDYQNELV 49 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH 120 ++ G V + F + D + V+Y+G +P+ EG+ VV +G + G Sbjct: 50 KLEGQVTD-----LEEGPPIAFAVDDGNYTKAVTYDGEMPETMSEGRIVVAEGHFD-GET 103 Query: 121 ILAKEVLAKHDENYTPPE 138 ++A ++ + E P + Sbjct: 104 LVADDLTVRAHEGEHPDD 121 >UniRef50_Q5V2E7 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Haloarcula marismortui RepID=Q5V2E7_HALMA Length = 173 Score = 71.5 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 14/124 (11%) Query: 3 IRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRV 62 ++ K RL + ++ L + + + + F TP +I T G R+ + Sbjct: 1 MQTKTRLLVGGVLIPVL--FGAMAVTTMGGAAE-FTTPTKI------TDTNEYNGDRVNL 51 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHIL 122 G+V + + + +++F + D SV V Y+G +P+ G+ VV +G G+ + Sbjct: 52 EGIV----IDIEQTNDQLSFNVTDENESVPVVYDGPMPETMSVGRTVVAKGYY-NGSVVE 106 Query: 123 AKEV 126 A+ + Sbjct: 107 AESL 110 >UniRef50_Q55DW5 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q55DW5_DICDI Length = 1791 Score = 68.1 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 10/100 (10%) Query: 38 YTPGEILYGKRETQQMPEV----GQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEG-SVD 92 +P EI + + +LR+ G + GS+ D + +F + D++G +D Sbjct: 1553 LSPSEINENSQNPNTKATIIGNQQMQLRMFGEIQQGSLV-DRDCNGCSFRVSDSKGFYLD 1611 Query: 93 VSYEGILPDLFRE---GQGVVVQGELEKGNHILAKEVLAK 129 V Y +P F + GQ V+V G+L + +A VL K Sbjct: 1612 VHYSHRVPPFFNDTQSGQQVIVIGKL-QDGRFIADNVLCK 1650 >UniRef50_D2MJF3 Cytochrome c-type biogenesis protein CcmE n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJF3_9BACT Length = 160 Score = 67.3 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 6/110 (5%) Query: 18 GLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNS 77 G L + +V L N + L ++ Q+ P +RV GMV G+++ Sbjct: 9 GGVLIVAIVFIVLTYN--YYRDHLASLVPQQVKQEAPTGD--VRVLGMVQGGTLETRAAG 64 Query: 78 LKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKG-NHILAKEV 126 + TFT+ ++ V Y+G PD RE + +V+ G A+++ Sbjct: 65 -EATFTLLGKSATLPVHYQGPPPDNLRELKILVLVGTWNAATQVFEARDI 113 >UniRef50_D2QN11 Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN11_9SPHI Length = 159 Score = 67.3 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 15/124 (12%) Query: 33 NIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQR--------DPNSLKVTFTI 84 + ++ T + K+E + + V G V + R + FT+ Sbjct: 38 DASVYTTFTKAEQMKKEGD-----DKMIHVVGKVQKDAQGRITDMLYNPAIDPNHFEFTL 92 Query: 85 YDAEGSV-DVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAM 143 D E V + P F + +V+ G + +G+H ++L K Y ++E Sbjct: 93 IDNENRAQKVVFNSPKPQDFERSEQIVIIGAM-QGDHFQCNKILLKCPSKYQDGKLETTE 151 Query: 144 EANH 147 Sbjct: 152 HEAK 155 >UniRef50_C6W7T7 Putative uncharacterized protein n=3 Tax=Flexibacteraceae RepID=C6W7T7_DYAFD Length = 144 Score = 66.9 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 10/116 (8%) Query: 43 ILYGKRETQQMPEVGQRLRVGGMVMPGS--------VQRDPNSLKVTFTIYDAEG-SVDV 93 + + K + + + V G + + + + + FT+ D V Sbjct: 30 VDFTKAKAMAADGDNESIHVVGKLKKDAAGQILEMEYRPEIDPNLFVFTLIDNNNVEQKV 89 Query: 94 SYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRR 149 Y+ P F + + VVV G++++G+ A+++L K Y ++E + Sbjct: 90 VYKNSKPQDFDKSEQVVVVGKMQQGS-FTAEKILMKCPSKYEEGKMETTEHTAKQS 144 >UniRef50_D2RHD0 Putative uncharacterized protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RHD0_ARCPR Length = 123 Score = 53.4 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 45/129 (34%), Gaps = 18/129 (13%) Query: 7 NRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMV 66 N+ A+ L L L + + + ++ K +R+ V G V Sbjct: 2 NKFVPVIALTMVFGLIGYLTLSSTS-----YLSVSDLKEIKDI--------RRVVVIGNV 48 Query: 67 MPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQG-VVVQGELEKGN-HILAK 124 GSV+ + + F I D V V Y + G G VVV+G N I A Sbjct: 49 TKGSVKFED---HLEFRINDGVWEVKVIYPSYVRLDNASGYGTVVVEGTYYPENKTIFAV 105 Query: 125 EVLAKHDEN 133 + +K Sbjct: 106 RIESKCPSK 114 >UniRef50_A8A8M6 Putative uncharacterized protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8M6_IGNH4 Length = 134 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 49/146 (33%), Gaps = 21/146 (14%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + R + L L +G A S + +++ + T Sbjct: 1 MKTKPNVRYLLMSVSLLALFAVVGFYAGASSS----YTDVSDLVKSRPGTYL-------- 48 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIYDA---EGSVDVSYE----GILPDLFREGQGVVVQG 113 V G V+ +V D L + D E V VSY G L + +VV+G Sbjct: 49 -VRGDVVKWTVTPDRQLLVLYLKGKDGSTIEADVPVSYIEKKYGPLSQVIITNGEMVVKG 107 Query: 114 ELEKGNHILAKEVLAKHDENYTPPEV 139 + G + +E+L Y P V Sbjct: 108 YWD-GKVLHVEEILKGCHSAYEQPAV 132 >UniRef50_D2UCX5 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UCX5_XANAL Length = 49 Score = 48.4 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 21/38 (55%) Query: 118 GNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYK 155 +A+EV AKHDE Y P E+ + M+ HR+ + Sbjct: 11 DGAFVAEEVPAKHDETYMPRELAENMDQAHRKQHVGAR 48 >UniRef50_D2RL61 DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RL61_ACIFE Length = 785 Score = 45.3 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 25/155 (16%) Query: 14 AVLAGLALTIGLVLYALRSNIDLFY-----------TPGEILYGKRETQQMPEVGQRLRV 62 GL + + + D + T + + ++G+ R Sbjct: 29 IGALGLGAILTFAAWKKEWSRDFYMGLFLVCIFCAGTSRGTVEKTAAQRMAQQLGRTGRF 88 Query: 63 GGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVV-VQGELEK-GNH 120 G V+PGS++ + +F + + +G + V + FR G G+V V G L+ Sbjct: 89 TGRVVPGSIREGRHGNS-SFLLEEQKGRIRVFVQ--KSGRFRPGAGIVQVTGVLKPVDGF 145 Query: 121 ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYK 155 PEV A+ R +V K Sbjct: 146 FN---------PGMQDPEVGAAIRKEGGRIQTVGK 171 >UniRef50_A2BMX2 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMX2_HYPBU Length = 136 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 25/151 (16%) Query: 1 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL 60 M + + A + A A+ + + +++ RE ++ Sbjct: 1 MAAGKAKPILAAIVLFAAFAVIGYYAVKGSS-----YMDVSDVVKLVREA--------KV 47 Query: 61 RVGGMVMPGSVQRDPNSLKVTFTIY--DAEGSVDV---SYE----GILPDLFREGQGVVV 111 V G + S+ D S K+ + D + V Y G + L + VVV Sbjct: 48 TVKGRLA--SLHYDQASRKLYLVLEGRDGSKLLAVADAEYIEKKYGPIQYLRWDPDSVVV 105 Query: 112 QGELEKG-NHILAKEVLAKHDENYTPPEVEK 141 +G + + ++L Y+ P ++ Sbjct: 106 EGVYDPATGTLRVIDILEGCHSGYSQPAIKD 136 >UniRef50_A8DJC8 DNA polymerase III alpha subunit n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJC8_9BACT Length = 445 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 15/98 (15%) Query: 27 LYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKV-TFTIY 85 L R + F + L +Q P GQ +R+GG+V V+ + FT+ Sbjct: 253 LATFRETLAAFKS----LSYAELAEQAPGPGQVVRMGGIVSNFVVKNTKKGDRFAVFTLE 308 Query: 86 DAEGSVDVSYEGILPDLFR-------EGQGVVVQGELE 116 D GS++V P+ FR +G V+V G +E Sbjct: 309 DETGSIEVI---AWPETFRRFGEQVTDGAAVLVTGRVE 343 >UniRef50_A5CYU9 Hypothetical membrane protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CYU9_PELTS Length = 159 Score = 40.3 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 3/107 (2%) Query: 9 LWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMP 68 +A + + + L+L + + + + VG+ +R+ G V Sbjct: 30 FLLAALPAILVLVGVPLILNEMNRRHMDKIDVRDFKLYRVKDLAGLPVGEPVRLRGQVKA 89 Query: 69 GSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGEL 115 S++ + F + D G++ V + + G V G L Sbjct: 90 VSLKW---LNRPHFQVSDGSGTIGVFMVWAPREDIKPGDSVEAVGSL 133 >UniRef50_C3CTJ5 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CTJ5_BACTU Length = 1237 Score = 40.0 bits (92), Expect = 0.029, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 8/89 (8%) Query: 47 KRETQQMPEVGQRLRVGGMVMPGSVQR--DPNSLKVTFTIYDAEGSVD-VSYEGILPD-- 101 K E ++ + +RV G++ N F + D G + V++ +L Sbjct: 1063 KDEADRVRSYKKSIRVAGIITEIETYYTKKDNKPLNVFKLEDTTGEIKCVAFSNVLEQSA 1122 Query: 102 -LFREGQGVVVQGELEKGNHILAKEVLAK 129 L EG + V+G+ E+ + +++ K Sbjct: 1123 GLLHEGSIIAVEGKFEEDDR--GTQIMVK 1149 >UniRef50_C0WA53 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WA53_9FIRM Length = 766 Score = 39.2 bits (90), Expect = 0.040, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 45 YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILP 100 ++ P +G +R+ G + PGS++ S V+FT+ + V + G LP Sbjct: 69 RQSAASRMAPFLGNPVRLTGRLEPGSLRVRDRS--VSFTLLYEGMRIPVLHLGTLP 122 >UniRef50_C4FT83 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT83_9FIRM Length = 659 Score = 38.4 bits (88), Expect = 0.080, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 23/115 (20%) Query: 2 NIRRKNRL---WIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQ 58 RRK R+ +A L + + + L + + E+ ++ Sbjct: 329 KPRRKRRIAAWLLAIISLLVICGGVYIAYTRLTE----YTSVPEVAKLSKDEAVQKIQAA 384 Query: 59 RLRVG------------GMV---MPGSVQRDPNSLKVTFTIYDAEGSVDV-SYEG 97 L+VG G V PGS R + V I + + V++ +Y G Sbjct: 385 NLQVGAIKQTWSDSIPQGQVIKSTPGSGARIRKASTVDLEISNGKEQVEIGNYVG 439 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.143 0.398 Lambda K H 0.267 0.0437 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,029,624,564 Number of Sequences: 3077464 Number of extensions: 45549906 Number of successful extensions: 129024 Number of sequences better than 1.0e-01: 122 Number of HSP's better than 0.1 without gapping: 254 Number of HSP's successfully gapped in prelim test: 66 Number of HSP's that attempted gapping in prelim test: 128275 Number of HSP's gapped (non-prelim): 338 length of query: 159 length of database: 1,040,396,356 effective HSP length: 118 effective length of query: 41 effective length of database: 677,255,604 effective search space: 27767479764 effective search space used: 27767479764 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 87 (38.0 bits)