17/01/2012 22:20:33 : INFO  : Run start: Tue Jan 17 22:20:32 GMT 2012
17/01/2012 22:20:37 : INFO  : Initialised job
17/01/2012 22:20:39 : INFO  : Renaming log file 'phyre2_20120117_222031.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/1d7cb140772134f9/phyre_20120117_222031.log'
17/01/2012 22:20:40 : INFO  : Initialised job:
Sequence
>batch____
MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQTAARTQAEKFT
LGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV

17/01/2012 22:20:41 : INFO  : Checked sequence
17/01/2012 22:20:44 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 22:20:45 : INFO  : PSI-BLAST 3 iterations
17/01/2012 22:21:31 : INFO  : PSI-BLAST 5 iterations
17/01/2012 22:22:20 : INFO  : Finished PSI-BLAST
17/01/2012 22:22:22 : INFO  : Running Buildali to generate a3m file
17/01/2012 22:26:12 : INFO  : Converting to HMM
17/01/2012 22:26:14 : INFO  : Calibrating HMM
17/01/2012 22:26:22 : INFO  : Searching HMM database
17/01/2012 22:29:03 : INFO  : Finished buildali
17/01/2012 22:29:04 : INFO  : Predicting secondary structure
17/01/2012 22:29:11 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 22:29:13 : INFO  : Predicting Disordered regions
17/01/2012 22:29:16 : INFO  : Predicted Disorder (Disopred)
17/01/2012 22:29:18 : INFO  : Running memsat_svm check
17/01/2012 22:33:58 : INFO  : Globular protein
17/01/2012 22:33:59 : INFO  : Predicted Transmembrane (memsat_svm) ID '1d7cb140772134f9'
17/01/2012 22:34:01 : INFO  : Initialising fold library search
17/01/2012 22:34:03 : INFO  : Initialised search input
17/01/2012 22:34:05 : INFO  : Building Ensemble models
17/01/2012 22:34:09 : INFO  : Building hh.c2clyA_.model.1.pdb
17/01/2012 22:34:22 : INFO  : Building c2clyA_.1.pdb
17/01/2012 22:34:35 : INFO  : Building d2clya1.2.pdb
17/01/2012 22:34:48 : INFO  : Building d2idob1.3.pdb
17/01/2012 22:35:01 : INFO  : Building d2ia9a1.4.pdb
17/01/2012 22:35:14 : INFO  : Building d1se7a_.5.pdb
17/01/2012 22:35:26 : INFO  : Building d2ae9a1.6.pdb
17/01/2012 22:35:40 : INFO  : Building c2wssT_.7.pdb
17/01/2012 22:35:54 : INFO  : Building c1kmiZ_.8.pdb
17/01/2012 22:36:07 : INFO  : Building d6paxa1.9.pdb
17/01/2012 22:36:20 : INFO  : Building d1rj9b1.10.pdb
17/01/2012 22:36:32 : INFO  : Building d1k78a1.11.pdb
17/01/2012 22:36:44 : INFO  : Building d1edla_.12.pdb
17/01/2012 22:36:57 : INFO  : Building d2fq3a1.13.pdb
17/01/2012 22:37:09 : INFO  : Building d1wgwa_.14.pdb
17/01/2012 22:37:22 : INFO  : Building d1eexa_.15.pdb
17/01/2012 22:37:35 : INFO  : Building c3s0rB_.16.pdb
17/01/2012 22:37:47 : INFO  : Building c3s0rA_.17.pdb
17/01/2012 22:37:59 : INFO  : Building c1ylmA_.18.pdb
17/01/2012 22:38:11 : INFO  : Building c2i9zB_.19.pdb
17/01/2012 22:38:24 : INFO  : Building d2i9xa1.20.pdb
17/01/2012 22:38:52 : INFO  : Finished HH model building
17/01/2012 22:38:53 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 22:40:34 : INFO  : html domain output complete ID '1d7cb140772134f9'
17/01/2012 22:44:01 : INFO  : Run end  : Tue Jan 17 22:44:00 GMT 2012
