Phyre 2 alignment of P25906 with d6paxa1

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Job Description | P25906
Confidence | 20.70% | Date | Thu Jan 5 11:42:45 GMT 2012
Rank | 60 | Aligned Residues | 56
% Identity | 27% | Template | d6paxa1
SCOP info | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Paired domain
Resolution | 2.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | A | M | Q | L | A | G | P | G | V | F | G | P | P | R | D | R | H | V | A | I | T | V | L | R | E | A | L | A | L | G | V | N | H | I | D | T | S | D | F | Y | G | P | H | V | T | N | Q | I | I | R | E | A | L | Y | P | Y | S | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | V | N | Q | L | G | G | V | F | V | N | G | R | P | L | P | D | S | T | R | Q | R | I | V | E | . | L | A | H | S | G | A | R | P | C | D | I | S | R | I | L | Q | V | . | . | S | N | G | C | V | S | K | I | L | G | R | Y | Y | A
Template Known Secondary structure |  |  |  |  | T | T | S |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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