Phyre 2 alignment of P25906 with c3ihkC_

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Job Description | P25906
Confidence | 11.71% | Date | Thu Jan 5 11:42:45 GMT 2012
Rank | 76 | Aligned Residues | 40
% Identity | 15% | Template | c3ihkC_
PDB info | PDB header:transferase | Chain: C: PDB Molecule:thiamin pyrophosphokinase; | PDBTitle: crystal structure of thiamin pyrophosphokinase from2 s.mutans, northeast structural genomics consortium target3 smr83
Resolution | 3.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |  | . | . | . | . | . | 250 | . | . | . | . | . | . |  |  | . | . | . | 260 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | L | G | A | T | P | M | Q | V | A | L | A | W | L | L | Q | . | R | S | P | N | I | L | L | I | P | G | T | S | . | . | S | V | A | H | L | R | E | N | M | A | A | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | K | N | D | T | D | T | E | L | A | L | K | T | I | F | D | C | F | G | R | V | E | I | I | V | F | G | A | F | G | G | R | I | D | H | X | L | S | N | I | F | L | P
Template Known Secondary structure |  | S |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | S |  |  |  |  |  |  | S |  | S | S | S |  |  |  |  |  |  |  |  |  | T | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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