11/01/2012 23:55:34 : INFO  : Run start: Wed Jan 11 23:55:33 GMT 2012
11/01/2012 23:55:39 : INFO  : Initialised job
11/01/2012 23:55:41 : INFO  : Renaming log file 'phyre2_20120111_235532.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/1d3a40cb7c11de8a/phyre_20120111_235532.log'
11/01/2012 23:55:42 : INFO  : Initialised job:
Sequence
>batch____
MRGKILLYQLKYRWQSLSIFGCFLCKMTLFRYQKIIYDTGVHQMRSFFYTICSSEQQESI
TDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIHHEMNRQDTLVIPDLSCLG
RTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFLIARQDTIDIHNLKSTKSRYR
HVKKKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSISLSTVKRHWNNGIIG

11/01/2012 23:55:43 : INFO  : Checked sequence
11/01/2012 23:55:45 : INFO  : Finding homologues with PSI-BLAST
11/01/2012 23:55:46 : INFO  : PSI-BLAST 3 iterations
11/01/2012 23:57:06 : INFO  : PSI-BLAST 5 iterations
11/01/2012 23:58:54 : INFO  : Finished PSI-BLAST
11/01/2012 23:58:56 : INFO  : Running Buildali to generate a3m file
12/01/2012 00:04:36 : INFO  : Converting to HMM
12/01/2012 00:04:38 : INFO  : Calibrating HMM
12/01/2012 00:04:51 : INFO  : Searching HMM database
12/01/2012 00:09:13 : INFO  : Finished buildali
12/01/2012 00:09:14 : INFO  : Predicting secondary structure
12/01/2012 00:09:23 : INFO  : Predicted secondary structure (PSI-Pred)
12/01/2012 00:09:24 : INFO  : Predicting Disordered regions
12/01/2012 00:09:30 : INFO  : Predicted Disorder (Disopred)
12/01/2012 00:09:32 : INFO  : Running memsat_svm check
12/01/2012 00:12:18 : INFO  : Globular protein
12/01/2012 00:12:19 : INFO  : Predicted Transmembrane (memsat_svm) ID '1d3a40cb7c11de8a'
12/01/2012 00:12:21 : INFO  : Initialising fold library search
12/01/2012 00:12:25 : INFO  : Initialised search input
12/01/2012 00:12:28 : INFO  : Building Ensemble models
12/01/2012 00:12:33 : INFO  : Building hh.c2gm4B_.model.1.pdb
12/01/2012 00:12:49 : INFO  : Building hh.c2r0qF_.model.2.pdb
12/01/2012 00:13:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/1d3a40cb7c11de8a/hh.c2r0qF_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/1d3a40cb7c11de8a/c2r0qF_.2.pdb
12/01/2012 00:13:08 : INFO  : Building c2gm4B_.1.pdb
12/01/2012 00:13:23 : INFO  : Building c2r0qF_.2.pdb
12/01/2012 00:13:42 : INFO  : Building d1gdta2.3.pdb
12/01/2012 00:13:57 : INFO  : Building d2gm4a2.4.pdb
12/01/2012 00:14:10 : INFO  : Building c3g13B_.5.pdb
12/01/2012 00:14:23 : INFO  : Building c3pkzK_.6.pdb
12/01/2012 00:14:37 : INFO  : Building d2rsla_.7.pdb
12/01/2012 00:14:52 : INFO  : Building c3guvA_.8.pdb
12/01/2012 00:15:06 : INFO  : Building c3ploX_.9.pdb
12/01/2012 00:15:20 : INFO  : Building c3bvpB_.10.pdb
12/01/2012 00:15:34 : INFO  : Building d1hx7a_.11.pdb
12/01/2012 00:15:51 : INFO  : Building c3lhfC_.12.pdb
12/01/2012 00:16:07 : INFO  : Building c3lhkA_.13.pdb
12/01/2012 00:16:28 : INFO  : Building d1ijwc_.14.pdb
12/01/2012 00:16:44 : INFO  : Building d1hcra_.15.pdb
12/01/2012 00:16:59 : INFO  : Building c1u78A_.16.pdb
12/01/2012 00:17:15 : INFO  : Building d1pdnc_.17.pdb
12/01/2012 00:17:30 : INFO  : Building c6paxA_.18.pdb
12/01/2012 00:17:45 : INFO  : Building d1k78a1.19.pdb
12/01/2012 00:18:03 : INFO  : Building c3o60A_.20.pdb
12/01/2012 00:18:56 : INFO  : Finished HH model building
12/01/2012 00:18:58 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
12/01/2012 00:19:57 : INFO  : html domain output complete ID '1d3a40cb7c11de8a'
12/01/2012 00:39:56 : INFO  : Run end  : Thu Jan 12 00:39:55 GMT 2012
