Phyre 2 alignment of P77607 with c3hefB_

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Job Description | P77607
Confidence | 86.69% | Date | Thu Jan 5 12:30:58 GMT 2012
Rank | 193 | Aligned Residues | 41
% Identity | 22% | Template | c3hefB_
PDB info | PDB header:viral protein | Chain: B: PDB Molecule:gene 1 protein; | PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit
Resolution | 1.65 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 189 | 190 | . | . | . | . | . |  |  | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |  | . | . | 220 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | E | G | S | K | Y | R | . | . | R | D | I | T | I | L | K | K | G | G | F | T | Q | A | E | I | A | K | K | L | S | I | . | S | L | S | T | V | K | R | H | W | N | N | G
Query Conservation |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | S | D | Y | M | P | E | V | A | D | D | I | C | S | L | L | S | S | G | E | S | L | L | K | V | C | K | R | P | G | M | P | D | K | S | T | V | F | R | W | L | A | K | H
Template Known Secondary structure |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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