Phyre 2 alignment of P77607 with c3tqnC_

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Job Description | P77607
Confidence | 70.47% | Date | Thu Jan 5 12:30:58 GMT 2012
Rank | 250 | Aligned Residues | 36
% Identity | 19% | Template | c3tqnC_
PDB info | PDB header:transcription | Chain: C: PDB Molecule:transcriptional regulator, gntr family; | PDBTitle: structure of the transcriptional regulator of the gntr family, from2 coxiella burnetii.
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |  |  |  |  |  |  |  |  | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | K | E | G | S | K | Y | R | R | D | I | T | I | L | K | K | G | G | F | . | . | . | . | . | . | . | . | T | Q | A | E | I | A | K | K | L | S | I | S | L | S | T | V | K | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
Template Sequence |  | K | P | I | Y | Q | Q | L | R | D | K | I | V | E | A | I | I | D | G | S | Y | V | E | G | E | X | I | P | S | I | R | K | I | S | T | E | Y | Q | I | N | P | L | T | V | . | S
Template Known Secondary structure |  |  | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  | B | T | S | B |  |  |  |  |  |  |  |  |  |  | T | T |  |  | S | S | S |  | . |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |  | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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