Phyre 2 alignment of Q9JMT4 with c1rr7A_

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Job Description | Q9JMT4
Confidence | 2.99% | Date | Thu Jan 5 12:38:09 GMT 2012
Rank | 74 | Aligned Residues | 30
% Identity | 33% | Template | c1rr7A_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:middle operon regulator; | PDBTitle: crystal structure of the middle operon regulator protein of2 bacteriophage mu
Resolution | 2.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | A | R | T | L | V | N | Y | L | G | G | L | T | T | Y | F | I | L | P | Y | S | D | S | L | Y | K | Y | I | I | D | N | I | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | V | A | I | C | K | H | L | G | G | G | Q | V | Y | I | . | . | P | R | G | Q | A | L | D | S | L | I | R | D | L | R | I
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  | . | . |  |  | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |  |  | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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