Phyre 2 alignment of Q9JMT4 with d3e9la1

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Job Description | Q9JMT4
Confidence | 2.49% | Date | Thu Jan 5 12:38:09 GMT 2012
Rank | 92 | Aligned Residues | 28
% Identity | 25% | Template | d3e9la1
SCOP info | Ribonuclease H-like motif | Ribonuclease H-like | Prp8 beta-finger domain-like
Resolution | 1.95

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | I | S | V | F | T | G | K | K | Q | V | I | I | A | C | I | K | K | G | F | S | F | A | E | I | V | N | F | L | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | H | T | S | V | W | A | G | Q | K | R | . | . | L | G | Q | L | A | K | W | K | T | A | E | E | V | A | A | L | I | R
Template Known Secondary structure |  |  | G | G | G | G | T | T |  | S |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1823 | . | . | . | . | . | . | 1830 | . | . |  |  | . | . | . | . | . | . | . | 1840 | . | . | . | . | . | . | . | . | . | 1850

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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