Phyre 2 alignment of Q9JMT4 with d1vf5c3

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Job Description | Q9JMT4
Confidence | 2.61% | Date | Thu Jan 5 12:38:09 GMT 2012
Rank | 86 | Aligned Residues | 22
% Identity | 36% | Template | d1vf5c3
SCOP info | Single transmembrane helix | Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor | Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
Resolution | 3.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | .
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Query Sequence |  | L | I | C | F | L | F | L | C | G | L | Y | H | I | S | V | F | T | G | K | K | Q | V
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Template Sequence |  | M | I | A | F | I | C | L | V | M | L | A | Q | L | M | L | I | L | K | K | K | Q | V
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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