08/01/2012 04:45:26 : INFO  : Run start: Sun Jan  8 04:45:24 GMT 2012
08/01/2012 04:45:32 : INFO  : Initialised job
08/01/2012 04:45:34 : INFO  : Renaming log file 'phyre2_20120108_044524.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/1d2b5dea1f46d245/phyre_20120108_044524.log'
08/01/2012 04:45:36 : INFO  : Initialised job:
Sequence
>batch____
MYCINTDCTYTKIAIEQLLHEKYFDDRRYCHSIKIYDLRFFKIEDVAYKLIQLFKERRKE
NIIFLCSDRFIHSKEKPRNIFFLDTKDSIRNWSRHLKKLRYCNSNLLICFLFLCGLYHIS
VFTGKKQVIIACIKKGFSFAEIVNFLNINARTLVNYLGGLTTYFILPYSDSLYKYIIDNI
IASSTEEYHILLTNQRRYYV

08/01/2012 04:45:37 : INFO  : Checked sequence
08/01/2012 04:45:41 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 04:45:42 : INFO  : PSI-BLAST 3 iterations
08/01/2012 04:46:40 : INFO  : PSI-BLAST 5 iterations
08/01/2012 04:47:54 : INFO  : Finished PSI-BLAST
08/01/2012 04:47:57 : INFO  : Running Buildali to generate a3m file
08/01/2012 04:49:47 : INFO  : Converting to HMM
08/01/2012 04:49:49 : INFO  : Calibrating HMM
08/01/2012 04:50:03 : INFO  : Searching HMM database
08/01/2012 04:53:56 : INFO  : Finished buildali
08/01/2012 04:53:58 : INFO  : Predicting secondary structure
08/01/2012 04:54:08 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 04:54:10 : INFO  : Predicting Disordered regions
08/01/2012 04:54:15 : INFO  : Predicted Disorder (Disopred)
08/01/2012 04:54:17 : INFO  : Running memsat_svm check
08/01/2012 04:56:41 : INFO  : Globular protein
08/01/2012 04:56:43 : INFO  : Predicted Transmembrane (memsat_svm) ID '1d2b5dea1f46d245'
08/01/2012 04:56:45 : INFO  : Initialising fold library search
08/01/2012 04:56:49 : INFO  : Initialised search input
08/01/2012 04:56:52 : INFO  : Building Ensemble models
08/01/2012 04:56:56 : INFO  : Building hh.d1fsea_.model.1.pdb
08/01/2012 04:57:16 : INFO  : Building d1fsea_.1.pdb
08/01/2012 04:57:36 : INFO  : Building d1p4wa_.2.pdb
08/01/2012 04:57:55 : INFO  : Building c2rnjA_.3.pdb
08/01/2012 04:58:13 : INFO  : Building d1sqwa2.4.pdb
08/01/2012 04:58:30 : INFO  : Building c1zljE_.5.pdb
08/01/2012 04:58:48 : INFO  : Building c2krfB_.6.pdb
08/01/2012 04:59:04 : INFO  : Building d1yioa1.7.pdb
08/01/2012 04:59:22 : INFO  : Building d1rp3a2.8.pdb
08/01/2012 04:59:40 : INFO  : Building c2jpcA_.9.pdb
08/01/2012 04:59:57 : INFO  : Building d1a04a1.10.pdb
08/01/2012 05:00:16 : INFO  : Building d1l3la1.11.pdb
08/01/2012 05:00:34 : INFO  : Building c3cloC_.12.pdb
08/01/2012 05:00:51 : INFO  : Building c1x3uA_.13.pdb
08/01/2012 05:01:09 : INFO  : Building d1nh2b_.14.pdb
08/01/2012 05:01:27 : INFO  : Building d1or7a1.15.pdb
08/01/2012 05:01:43 : INFO  : Building c2latA_.16.pdb
08/01/2012 05:02:00 : INFO  : Building c3hugA_.17.pdb
08/01/2012 05:02:18 : INFO  : Building d2ixoa1.18.pdb
08/01/2012 05:02:36 : INFO  : Building c2pcoA_.19.pdb
08/01/2012 05:02:52 : INFO  : Building d1gxla_.20.pdb
08/01/2012 05:03:27 : INFO  : Finished HH model building
08/01/2012 05:03:29 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 05:05:35 : INFO  : html domain output complete ID '1d2b5dea1f46d245'
08/01/2012 05:10:16 : INFO  : Run end  : Sun Jan  8 05:10:15 GMT 2012
