Phyre 2 alignment of Q9JMT4 with d1e3pa2

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Job Description | Q9JMT4
Confidence | 3.31% | Date | Thu Jan 5 12:38:09 GMT 2012
Rank | 66 | Aligned Residues | 18
% Identity | 56% | Template | d1e3pa2
SCOP info | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like
Resolution | 2.5

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | L | Y | H | I | S | V | F | T | G | K | K | Q | V | I | I | A | C | I
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Template Conservation |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | L | L | H | L | G | V | . | G | Q | K | V | Q | V | E | I | A | E | I
Template Known Secondary structure |  |  |  |  |  |  |  | S | . | S |  | B |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 676 | . | . | . | 680 | . | . |  | . | . | . | . | . | . | . | 690 | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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