 |
| Job Description | P0AB49 | | Confidence | 3.22% | Date | Thu Jan 5 11:14:38 GMT 2012 |
| Rank | 39 | Aligned Residues | 17 |
| % Identity | 29% | Template | c1ku2A_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:sigma factor siga; |
PDBTitle: crystal structure of thermus aquaticus rna polymerase sigma2 subunit fragment containing regions 1.2 to 3.1
|
| Resolution | 2.90 Å |
|
|   |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Y | W | W | V | R | H | Y | D | K | R | C | R | R | S | D | N | R |
| Query Conservation |   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|
| Template Sequence |   |
T | W | W | I | R | Q | A | I | N | R | A | I | A | D | Q | A | R |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|