Reference sequence (query): batch____ Identities normalised by aligned length. Colored by: property
HSP processing: ranked Search cycle: 3
2 [ . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . ] 330
batch____ bits E-value N 100.0% 2:330 IQPISGPPPGQPPGQGDNLPSGTGNQPLSSQQRTSLESLMTKVTSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQLGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREATDRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWLQARQTLSQQNTPTLESLQMTLKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDILNQLYQRRVKGIDPRVMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLV
1 UniRef50_Q7CQ37 Flagellar regulator flk n=1... 321 2e-86 1 60.5% 2:330 1:332 MHPISGAPA-QPPGEGRNPLSAASEQPLSMQQRTVLERLITRLISLTQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLTELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDRPLLPAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQARQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRraDELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLV
2 UniRef50_A4TM69 Flagellar assembly regulato... 300 3e-80 1 41.3% 2:330 1:343 MQPLNGPGVPIGNDRHITPtsTVEDQALTPAQRTTLEKLIVRIMALSPVKSAEIWAGLRHNLSLDATGDLLARHFQPAEQLLQTRLSQAQENHASQQLRQQLTALLPQGNNRQAVSDFIRQQFGHTVLSQLSHTELQQVLVLLQSGTLNIPQPQLTTLTDRPLLPAEHQNIQSLVAKLSAATGEQPTKIWQTLFDMVGVKHHDPLPARHFQLLSQFLQTKVALSQQTAPTLVNLQTALKQPADAQEQQLLADYSQNRFQASPTTPLTQAQLNDIINILFAARLEKANakPLQPLINPfaSLPESLQPLLQKPSLVVVALIIVIAFLLAI
3 UniRef50_D2T7J6 Protein div n=4 Tax=Enterob... 294 3e-78 1 45.2% 2:322 1:335 MQPLSGPGTPLPGERpdAPSATagDRPLTPAQRTTLERLIVKIMSLSSLKSAELWAGLRHEVGVKNDAGLQARHFPQAEQFLNIRLAQVQDSHATRQLLQQLSDLLPTGNNRQAVSDFIRQQFGHTVLSSLNPDQLRQALTMLQNGQMAIPQPQQGHATDRTLLPAEHHALNQQISRLAAATGEQPVKLWASLLKVVNLHSGDPIPSRLFPLLNQYLQASQTSTQHATSTLSQLTATLKQPLDTGEQRLLEDYSQQRFNATPQTVLSATQIQDLLNLLFSRRAERLLEHPIADSERHPKPIAMplQPLASRPVLTAFAALI--------
4 UniRef50_Q2NSH8 Cell division protein n=1 T... 265 2e-69 1 38.9% 2:299 1:291 MQPVTGPGTPPRGQTPPPPGPDQP---LTTAQRMTLERLITRIMALSPSKPAEIWAALFHHLQIAGGGELRVRHFLPTEQLLQGRLVTAQETLAGRQLLQQLTDLLPQGNNRQAVSDFIRSQFGHTVLSQLDAGQLRQVLHLLQNGQLDIPAPQQAAMTDRTLLPAEHQALSQLITRLAALTGETPTELWESLHRMMGLKSGDPIPARHFPLLSQFLQSHLTLSQQGHPTLATLTAVLKHPVHGEEQQAVEQYCRQHFAADSQTP----DVRLLQPLTHTLIAIEHDPRPVRSARSPL-------------------------------
5 UniRef50_C6DA78 Flagella assembly protein n... 244 3e-63 1 34.0% 2:330 1:413 MQPVSGPGAPLPGERPVTsgSANGDRPLTLAQRTTLENLVLKVAALTTSKAAEVWTTVKQGLGLAENSELQSRHYQPAEQILQTRLTQAQDNGGRQQLLQRLTDMLSQGNNRQAVSDFIQQRFGSTTLSALNKTQLQQVVTLLQNGQiaTQTAQAANSPDRPLNPAEQRGLNQLVTRLATMTGEQPARVLSNLMMMQNLNAGDTIPLKHLPLLTQFLQAQVELQQTQTLLRAtlLSPNLAPLQALLQqlLMDYTQNRFNIGLQTPLTPMQVSDLLTFLFtqRAQETDWTATSQLLHpfNPLIASlqSLFHKPMFLVIvtCVAAFLLWVL
6 UniRef50_D0KLB4 Flagella assembly protein n... 244 3e-63 1 35.0% 2:330 1:420 MQPVSGPGAPLPGERVVAPTTTsgDRPLTLAQRTTLENLVLKVAALTTSKAAEVWTTVKQGLGLAENNELQSRHYQPAEQILQTRLTQAQDNSGRQPLLQRLTEMLPQGNNRQAVSDFIRQQFGSTTLSALSKTQLQQVVTLLQNGQisTPQAAQApsPERPLSPVEQRSLNQLVTRLATMTGEQPARVLSNLMTMQNLTPGDTIPFKHLPLLTQFLQAQVesSSQPLPTQNTLLSplQQPMTAQEQQLLIDYTQNRFNISLQTPLTPMQVSDLLAFLFTQRiqETDWTTTSQLLHpfNPLIASlqSLFHKPMFLVIvtCVAAFLLWVL
7 UniRef50_C6C9T9 Flagella biosynthesis regul... 230 5e-59 1 40.5% 21:329 40:413 -------------------ASTTGDTPLTSAQRTVLEKLVNQITGQSGAKSAEVWAGLRYSLGVSGNTDLLSSQFTAATQILQARLTTAQDAQQTRQLLQQVTNLLQQGNNRQAVSNFIRQQFGHTTLGSLTPSQLQQVVNVLqnTAVATPqpGIALLTGRPLSAAEHNSLNQLVARLVALSGETSAQVWRTMLEMQKLDVGQPIPAQHFQTLSQYLQTQTALLQQHasTLLSLLTTLKQPADHQEQSLLQDFVRTSFNAAPQTPLTPTQASEVVTFLYRRRLQQLQEspVQPIINplPPDWRPLFNRPLGLALILTLVAVLLLWILL-
8 UniRef50_B3Y0N4 Predicted protein n=14 Tax=... 183 6e-45 1 18.8% 110:322 8:201 ------------------------------------------------------------------------------------------------------------SNNRVAGRDF--------------HEKNIQIERYDGSHTVNIAIPSNNDDDDRPLLKAQRKELNSLVAAIAEASNTEAFIIWQKVHAEIGVAGIDDMTVNQYKTAESFLHAMLERCKDHDACKALVSLLLRNSEDCGLRQKLLRYCHINFGTGRLNDLTRSQLQSALSWLEQQSASSHTESSTLPEVRLRASELIRLYPKE-----IIFFICV--------
9 UniRef50_B1JN55 Putative uncharacterized pr... 163 7e-39 1 21.5% 149:325 33:211 ---------------------------------------------------------------------------------------------------------------------------------------------------IVIPTTEIDN---RPLVPAQRKQLNQLVKEIIETGHEEGFSIWQKVHAEIGVSSIEEMTVSHYQAAYSYLQALRDRYCEKEASKSLIHLLLKNTQQESERQQLIRYCHIQFGSGRLTELTRLQLQQALSWLDEKQYLETPPSTvqQLFRHYPIFSGGVF----ASGFLIALLIVAIG-----
10 UniRef50_B2NA81 Putative uncharacterized pr... 163 1e-38 1 15.4% 139:320 23:202 -----------------------------------------------------------------------------------------------------------------------------------------QIESLDSSQTININVPAKA-GEERPLVKSQRISIRKLVNAVAESENTETVPVWVKLHAELGVNGVSEISGSQYKVALKFLNDLLAESKEKKTKKVLVAKILNKTEAQDLRHKLNEHCSIYYKNTRLDELSHNQLVEIYEWIE-KTAPIVSPECKEDMSVSFNDNIRTSNSVNRTPFIKLLTT----------
11 UniRef50_C5BGX9 Putative uncharacterized pr... 160 8e-38 1 18.0% 146:328 30:197 ------------------------------------------------------------------------------------------------------------------------------------------------NITLSAPQSDL-----RPLVPAQRMRLNQLVQQITDCGDDMGMTIWQKVYAELGVNGLDELTVSHYPAARGYLHILLKQARAKSADKALIRLLQTGATTSIRRRQLQRYCHIQFGSGYLHELSRSQLRQALAWLEERGGDDI-PALTSPFW-----------PRYRAPLlvLFMAGVLLGLWW--
12 UniRef50_Q7WDD7 Putative uncharacterized pr... 154 5e-36 1 16.5% 150:319 22:193 ----------------------------------------------------------------------------------------------------------------------------------------------------NFGKPEEELSPGVDLVPAQRRALNDLVRTITEEFDDEPWDVWRIVHAKLGVKSVQDLTRMQFELAEQVLKNHLNGRREESLLRGLVSKVLRISAEKDNRTEVELFCSRNFGTSQFKLLTREQLQATLGFAHdkSAHDHGPTAPLptMRPCPP---PIERRFTWPWLAVTL-----------
13 UniRef50_B7NJL0 Putative uncharacterized pr... 143 1e-32 1 14.3% 146:313 19:184 ------------------------------------------------------------------------------------------------------------------------------------------------DVTIHNYSADILPSAQQPISLLQKRDLHRLMDELVDL-GESKRELWMTIHTKLNTKTVNEMTAADYHGAVEILQ-RYAQQIQNMKDCNLLVSKIMALTDPGYRLDRDRYCLKHFGTTHLKGLDKEQLQAVFGYFDDLLNIRDESKTLSPPSESGAKSVATVPTRSRKP-----------------
14 UniRef50_D2L6R7 Phage regulatory protein, R... 141 3e-32 1 16.6% 150:318 138:302 ----------------------------------------------------------------------------------------------------------------------------------------------------ALAAPVASPAIPRRTTAQERNPLAVLVNKLMGEQgtRPAYiwRRFHEVFGVKSVDEITVDQLPRALAFVDALIAFREGVEPKALPAGRP---------RNNLGDYCALYGGLPP----TPQYWMDLlsEAFGRKLDEIKAEATKPFRVNRKSGISTYFDEAMSPMYSLF------------
15 UniRef50_B5TA76 Gp12 n=4 Tax=root RepID=B5T... 121 3e-26 1 18.0% 16:143 33:163 --------------QSDAPPAEAVER-LSREERAQLSAWAEEvaEAGLVTTKLVRASLNTHLGVKSVDEMIADMFPRANVYLNGWRNCAFGResNDAMIAQVMRIWavPHVKVATLEFSRTNFNREMLRNMTAWELRATLAF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 UniRef50_D2L6T8 Prophage antirepressor n=1 ... 112 1e-23 1 18.2% 160:318 129:292 --------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTLTAGQQQEIKELVQAKASAYPDAVkqIWMRLQRKFKVPRYEELPVSLFGEARDYVIAMQVRSVDAPALEG--AAATPALPPAYPRSTLDDYKALYRSLPP----SPQYWMDLLshAHEILGSELeaEATKPFRVNRKSGVSTYFDEAMTPAYRMF------------
17 UniRef50_A4PE55 Hypothetical transmembrane ... 108 2e-22 1 13.3% 125:229 13:117 ---------------------------------------------------------------------------------------------------------------------------GQVVAGDATHDGASATNHLSNVITINNGKGDQAPEPSRKINDLQRRRIASKVHEVMNATGMEKLEVYRIILTDFGLDEIRDLPRNQFKAVMEMLERWIAEESEEP-----------------------------------------------------------------------------------------------------
18 UniRef50_UPI000190BBCC flagella biosynthesis regul... 96 1e-18 1 37.9% 228:330 1:108 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRraDELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALfwFL
19 UniRef50_UPI0001911B32 flagella biosynthesis regul... 72 4e-11 1 100.0% 226:308 1:83 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQNTPTLESLQMTLKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDILNQLYQRRVKGIDPRVMQPLLNPFPPMMDTLQN----------------------
20 UniRef50_A3RZW5 Putative uncharacterized pr... 61 7e-08 1 10.5% 125:229 86:190 ---------------------------------------------------------------------------------------------------------------------------GQAVAAAAMRDRTVAASQRGNAIAVNSGTGDPATEPIRRICDLQRGRIAAKVRELTDASGLKELEVYRIILADFGLSSIGDLRRDQFKTAMEKLGRWISEARDEP-----------------------------------------------------------------------------------------------------
21 UniRef50_Q8XSE3 Hypothetical transmembrane ... 55 3e-06 1 13.0% 140:231 2:93 ------------------------------------------------------------------------------------------------------------------------------------------ANHLSSVTTIHNGQGDSAIGPIRKISDLQRGRIAAKVHELKQATRLDERELYGVILADFGLADIGDLRRDQFKPAMEKLGRWISEVREDPTD---------------------------------------------------------------------------------------------------
22 UniRef50_A4JWR9 Gp22, putative phage-encode... 48 4e-04 1 14.6% 162:250 38:127 ----------------------------------------------------------------------------------------------------------------------------------------------------------------RYISDRQRRAIGAKVFELEAKTGVEKLMVYRRLMTRFKFRSMDEMPRELFERVMRYLDGWinGTAEQGASSSPQREIKEQAPAPEPQAT--------------------------------------------------------------------------------
23 UniRef50_A1KTW5 Putative DNA-binding protei... 47 8e-04 1 17.2% 168:283 167:296 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------QASKLQQLVKQVAAasPKSIRAIWASLNAHCKVPSYKLIALSDYDKAETYLRKWLGRLSNTATSKNniKLNVKQLELEDW---LKSYLEKNFSVESLTELSDEDLQKTYAAVSTKK-----------------------------------------------
24 UniRef50_C4GFQ8 Putative uncharacterized pr... 47 9e-04 1 18.4% 168:243 124:198 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------QRTPLRQAVSALVGLRGISYSDAYKMVHQRFGVAAIEEIPADVLPAAVEYVHRLTVGAL-PDDVLRVIASLLRHLP---------------------------------------------------------------------------------------
25 UniRef50_UPI00016A6A34 hypothetical protein BthaT_... 47 0.001 1 21.1% 168:224 31:87 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------QKRMIAQLVERIVEATKEEPLEVWRKVLARAGARKAKLILKSAYIDVEEYLVDWLGR----------------------------------------------------------------------------------------------------------
26 UniRef50_A9ANM7 Putative bacteriophage-enco... 47 0.001 1 15.5% 168:270 47:150 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------QRAAIAHRVFKIQKQTGTEALMVYRRLKTVFDYESIERMPRSKYKPAISYLDSWLRNGNLGNPPGSAALQKVKHPSPAAPTARRESPshVQFASPAAATFSPA------------------------------------------------------------
27 UniRef50_B3R3I8 Putative uncharacterized pr... 45 0.003 1 21.3% 155:262 35:131 ---------------------------------------------------------------------------------------------------------------------------------------------------------SAEAPDDRPLLLRQRFNIGRRVERIAAAEGVETAAIYRVLLEDYGGQIPSDISRAHYRSIVRDLDEWLDH----------LNGPNIRPASRSGQRQLPD-CRQSSGTA--------------------------------------------------------------------
28 UniRef50_B3S7Q7 Putative uncharacterized pr... 45 0.004 1 15.9% 136:280 987:1118 --------------------------------------------------------------------------------------------------------------------------------------QEQSTTTTSSNQLLATPTTVQEMSTSR-ILARENDLLNQQVCELMNEVQKLKKSAYNAQDDVDASNESQQLTSND-----KILQPLLQEVKQLRSDVNLLKKILISKASSDEQQDLA-------NLVRELALTRSDTAETLSGMF--------------------------------------------------
29 UniRef50_P03037 Antirepressor protein ant n... 43 0.012 1 17.5% 22:84 125:187 --------------------AENPRKKTSVDERTPLRDAVNMLVSKKHLMYPEAYAMIHQRFNVESIEELEASQIPLAVEYIH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 UniRef50_Q7NW41 Putative uncharacterized pr... 41 0.060 1 19.0% 22:147 29:155 --------------------SGQERERLNPAEVWPIKIKGRQLIEMTGKNSAEIWGRLKDILG-EGHNELFKDQEKAAHAILDLWIEQANFRGEDSalLIQLSELKAKYTEAQSTEQKLRKQYADTT-DRLRHSQ--QAYSNLEQQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
consensus/100% .........................................................................................................................................................................................................................................................................................................................................
consensus/90% .........................................................................................................................................................................................................................................................................................................................................
consensus/80% ......... ............................................................................................................................................................pp..ltt.l.tl.t......h.hh..h.t..th...t.h..t.h..h.thl...............................................................................................................
consensus/70% ...... .......................................................................................................................................h...ppttltphVtplht.ts.p.h.lat.hht..shtthp.hshp.h..h.phLpthht...tt......h.....t.........h........t..............................................................
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