BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (233 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q12GW5 30S ribosomal protein S3 n=397 Tax=Bacteria RepI... 303 3e-81 UniRef50_B2T745 30S ribosomal protein S3 n=167 Tax=cellular orga... 302 7e-81 UniRef50_C9KPB3 Ribosomal protein S3 n=1 Tax=Mitsuokella multaci... 271 1e-71 UniRef50_D2QSG4 Ribosomal protein S3 n=15 Tax=Bacteria RepID=D2Q... 266 6e-70 UniRef50_A8PNP8 Ribosomal protein S3 n=2 Tax=Gammaproteobacteria... 259 6e-68 UniRef50_Q01W98 30S ribosomal protein S3 n=172 Tax=Bacteria RepI... 255 9e-67 UniRef50_Q11QB8 30S ribosomal protein S3 n=26 Tax=Bacteria RepID... 248 2e-64 UniRef50_A6LEI5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=... 243 3e-63 UniRef50_B4CUY0 Ribosomal protein S3 n=1 Tax=Chthoniobacter flav... 243 5e-63 UniRef50_Q0RRR5 30S ribosomal protein S3 n=406 Tax=cellular orga... 243 5e-63 UniRef50_UPI0001C30EBD ribosomal protein S3 n=1 Tax=Conexibacter... 242 8e-63 UniRef50_B5YDU9 30S ribosomal protein S3 n=194 Tax=Bacteria RepI... 241 2e-62 UniRef50_C7M2X8 Ribosomal protein S3 n=2 Tax=Bacteria RepID=C7M2... 240 3e-62 UniRef50_Q3KLH5 30S ribosomal protein S3 n=13 Tax=Chlamydiaceae ... 239 4e-62 UniRef50_Q3ZZL8 30S ribosomal protein S3 n=38 Tax=Bacteria RepID... 238 2e-61 UniRef50_C6XHI5 30S ribosomal protein S3 n=1 Tax=Candidatus Libe... 235 7e-61 UniRef50_Q1IX78 30S ribosomal protein S3 n=2 Tax=Deinococcus Rep... 229 8e-59 UniRef50_Q3APH9 30S ribosomal protein S3 n=8 Tax=Chlorobium/Pelo... 227 3e-58 UniRef50_B4U750 30S ribosomal protein S3 n=6 Tax=Bacteria RepID=... 227 3e-58 UniRef50_C1CXG0 30S ribosomal protein S3 n=61 Tax=Bacteria RepID... 226 4e-58 UniRef50_Q04G79 30S ribosomal protein S3 n=3 Tax=cellular organi... 226 5e-58 UniRef50_C7H0X5 Ribosomal protein S3 n=8 Tax=Bacteria RepID=C7H0... 226 6e-58 UniRef50_A9NED9 30S ribosomal protein S3 n=175 Tax=Bacteria RepI... 220 3e-56 UniRef50_B0SA41 30S ribosomal protein S3 n=6 Tax=Leptospira RepI... 219 7e-56 UniRef50_A9FGJ7 30S ribosomal protein S3 n=1 Tax=Sorangium cellu... 217 3e-55 UniRef50_B2KEL5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=... 215 1e-54 UniRef50_UPI0001AEC3A6 30S ribosomal protein S3 n=1 Tax=Alteromo... 209 5e-53 UniRef50_C1XH61 SSU ribosomal protein S3P n=2 Tax=Meiothermus Re... 209 6e-53 UniRef50_B2S2E2 30S ribosomal protein S3 n=2 Tax=Treponema palli... 209 7e-53 UniRef50_Q2GED3 30S ribosomal protein S3 n=2 Tax=Neorickettsia R... 208 1e-52 UniRef50_B3CT11 30S ribosomal protein S3 n=2 Tax=Orientia tsutsu... 206 5e-52 UniRef50_C1KRC6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 204 2e-51 UniRef50_P19169 30S ribosomal protein S3, chloroplastic n=1 Tax=... 202 1e-50 UniRef50_B7J249 30S ribosomal protein S3 n=23 Tax=Bacteria RepID... 197 2e-49 UniRef50_Q7UN14 30S ribosomal protein S3 n=5 Tax=Planctomycetace... 196 6e-49 UniRef50_Q8YPI5 30S ribosomal protein S3 n=228 Tax=cellular orga... 195 8e-49 UniRef50_D2ISA0 Ribosomal protein S3 n=1 Tax=Cryptomonas paramec... 193 3e-48 UniRef50_B3PMP1 30S ribosomal protein S3 n=4 Tax=Mycoplasma RepI... 190 3e-47 UniRef50_C7BEM5 30S ribosomal protein S3, chloroplastic n=2 Tax=... 187 3e-46 UniRef50_B4S097 30S ribosomal protein S3 n=2 Tax=Alteromonas mac... 185 1e-45 UniRef50_C0JWQ0 30S ribosomal protein S3, chloroplastic n=1 Tax=... 184 2e-45 UniRef50_C0JWV6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 181 1e-44 UniRef50_B1AIM6 30S ribosomal protein S3 n=101 Tax=Bacteria RepI... 181 2e-44 UniRef50_C0QW02 30S ribosomal protein S3 n=3 Tax=Brachyspira Rep... 180 3e-44 UniRef50_Q20F10 30S ribosomal protein S3, chloroplastic n=2 Tax=... 180 3e-44 UniRef50_P41205 30S ribosomal protein S3 n=2 Tax=Mycoplasma RepI... 174 2e-42 UniRef50_Q8M9V0 30S ribosomal protein S3, chloroplastic n=1 Tax=... 174 3e-42 UniRef50_D1J746 30S ribosomal protein S3, chloroplastic n=2 Tax=... 173 4e-42 UniRef50_Q32RN6 30S ribosomal protein S3, chloroplastic n=32 Tax... 171 1e-41 UniRef50_Q601K8 30S ribosomal protein S3 n=6 Tax=Mycoplasma RepI... 171 2e-41 UniRef50_UPI0001B44297 30S ribosomal protein S3 n=1 Tax=Listeria... 162 1e-38 UniRef50_D0EVS4 30S ribosomal protein S3, chloroplastic n=1 Tax=... 161 2e-38 UniRef50_P56798 30S ribosomal protein S3, chloroplastic n=103 Ta... 159 9e-38 UniRef50_P56365 30S ribosomal protein S3, chloroplastic n=3 Tax=... 157 2e-37 UniRef50_P0C485 30S ribosomal protein S3, chloroplastic n=72 Tax... 142 7e-33 UniRef50_P58133 Plastid 30S ribosomal protein S3 n=1 Tax=Euglena... 133 4e-30 UniRef50_A6YGC6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 129 6e-29 UniRef50_B7T3V4 30S ribosomal protein S3, chloroplastic n=1 Tax=... 128 2e-28 UniRef50_B2X260 30S ribosomal protein S3, chloroplastic n=1 Tax=... 124 3e-27 UniRef50_Q06J59 30S ribosomal protein S3, chloroplastic n=1 Tax=... 122 1e-26 UniRef50_D0VMX7 Ribosomal protein S3 n=1 Tax=Volvox carteri f. n... 122 1e-26 UniRef50_B2X1Z6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 121 2e-26 UniRef50_B7T425 30S ribosomal protein S3, chloroplastic n=4 Tax=... 120 3e-26 UniRef50_B2Y1Z8 30S ribosomal protein S3, chloroplastic n=1 Tax=... 120 4e-26 UniRef50_Q06SI4 30S ribosomal protein S3, chloroplastic n=112 Ta... 118 1e-25 UniRef50_P46307 30S ribosomal protein S3, chloroplastic n=3 Tax=... 118 2e-25 UniRef50_Q2WGE8 30S ribosomal protein S3, chloroplastic (Fragmen... 117 3e-25 UniRef50_Q08365 30S ribosomal protein S3, chloroplastic n=2 Tax=... 115 2e-24 UniRef50_Q1KVX7 30S ribosomal protein S3, chloroplastic n=3 Tax=... 113 6e-24 UniRef50_D0FY21 30S ribosomal protein S3, chloroplastic n=1 Tax=... 112 1e-23 UniRef50_B7ZIJ3 30S ribosomal protein S3, chloroplastic n=1 Tax=... 110 3e-23 UniRef50_Q1RU61 Bacterial ribosomal protein S3 n=1 Tax=Medicago ... 98 2e-19 UniRef50_Q05FJ0 30S ribosomal protein S3 n=2 Tax=Candidatus Cars... 97 6e-19 UniRef50_C6UN14 Putative 30S ribosomal subunit protein S3 n=1 Ta... 92 2e-17 UniRef50_A4FWB6 30S ribosomal protein S3P n=11 Tax=Methanococcal... 92 2e-17 UniRef50_A7I5P5 30S ribosomal protein S3P n=2 Tax=Methanomicrobi... 89 1e-16 UniRef50_Q9G889 Ribosomal protein S3 n=1 Tax=Malawimonas jakobif... 88 2e-16 UniRef50_C5A280 30S ribosomal protein S3P n=8 Tax=Thermococcacea... 86 1e-15 UniRef50_UPI0001855078 30S ribosomal protein S3 n=1 Tax=Helicoba... 86 1e-15 UniRef50_Q46GA1 30S ribosomal protein S3P n=8 Tax=Euryarchaeota ... 85 2e-15 UniRef50_A8AA20 30S ribosomal protein S3P n=1 Tax=Ignicoccus hos... 84 3e-15 UniRef50_O28360 30S ribosomal protein S3P n=3 Tax=Euryarchaeota ... 83 6e-15 UniRef50_Q9YF78 30S ribosomal protein S3P n=1 Tax=Aeropyrum pern... 83 8e-15 UniRef50_D2LQE8 Ribosomal protein S3 n=1 Tax=Aciduliprofundum bo... 82 1e-14 UniRef50_A6YEA6 Ribosomal protein S3 n=1 Tax=Chlorokybus atmophy... 82 2e-14 UniRef50_Q8W9Q9 Ribosomal protein S3 n=1 Tax=Mesostigma viride R... 81 2e-14 UniRef50_B3V6F1 Ribosomal protein S3 n=2 Tax=environmental sampl... 81 3e-14 UniRef50_Q85UK5 30S ribosomal protein S3, chloroplastic (Fragmen... 80 4e-14 UniRef50_C0KT93 Ribosomal protein S3 (Fragment) n=50 Tax=Halimed... 80 4e-14 UniRef50_B9GND7 Predicted protein n=2 Tax=rosids RepID=B9GND7_POPTR 80 6e-14 UniRef50_C7NV53 Ribosomal protein S3 n=7 Tax=Archaea RepID=C7NV5... 80 6e-14 UniRef50_Q7YAL0 Ribosomal protein S3 n=1 Tax=Chara vulgaris RepI... 79 2e-13 UniRef50_A2BMC5 30S ribosomal protein S3P n=10 Tax=Thermoprotei ... 79 2e-13 UniRef50_Q1XG99 Ribosomal protein S3 n=1 Tax=Physcomitrella pate... 77 5e-13 UniRef50_Q2EEW0 Plastid 30S ribosomal protein S3 n=1 Tax=Helicos... 76 8e-13 UniRef50_Q8M1G0 Ribosomal protein S3 n=1 Tax=Chaetosphaeridium g... 76 9e-13 UniRef50_Q9HIR5 30S ribosomal protein S3P n=3 Tax=Thermoplasmata... 76 1e-12 UniRef50_P26865 Ribosomal protein S3, mitochondrial n=2 Tax=Marc... 75 1e-12 UniRef50_B3V6P6 Ribosomal protein S3 n=1 Tax=uncultured marine g... 75 1e-12 UniRef50_A4YCX2 30S ribosomal protein S3P n=3 Tax=Sulfolobaceae ... 75 3e-12 UniRef50_C6FG16 Ribosomal protein S3 n=1 Tax=Isoetes engelmannii... 74 3e-12 UniRef50_A0B9W4 30S ribosomal protein S3P n=3 Tax=Archaea RepID=... 74 3e-12 UniRef50_A0RVX9 30S ribosomal protein S3P n=2 Tax=Thaumarchaeota... 74 4e-12 UniRef50_Q673S3 Ribosomal protein S3 n=4 Tax=environmental sampl... 74 5e-12 UniRef50_Q9TCB0 Ribosomal protein S3 n=1 Tax=Nephroselmis olivac... 74 5e-12 UniRef50_D2DX40 Ribosomal protein S3 n=4 Tax=Podocarpaceae RepID... 73 8e-12 UniRef50_Q5QJE0 Ribosomal protein S3 n=20 Tax=Spermatophyta RepI... 72 2e-11 UniRef50_Q5PXB8 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda... 72 2e-11 UniRef50_Q18GF5 30S ribosomal protein S3P n=7 Tax=Euryarchaeota ... 72 2e-11 UniRef50_Q5PSC9 Ribosomal protein S3 (Fragment) n=20 Tax=Halimed... 72 2e-11 UniRef50_C1KRI4 Ribosomal protein S3 n=1 Tax=Micromonas sp. RCC2... 71 4e-11 UniRef50_B2MWV7 Ribosomal protein S3 n=1 Tax=Hemiselmis andersen... 70 5e-11 UniRef50_Q0P3H9 Mitochondrion, complete genome n=1 Tax=Ostreococ... 70 7e-11 UniRef50_A1RXG6 30S ribosomal protein S3P n=1 Tax=Thermofilum pe... 70 8e-11 UniRef50_P46740 Ribosomal protein S3, mitochondrial n=1 Tax=Prot... 69 8e-11 UniRef50_D2DWK6 Ribosomal protein S3 (Fragment) n=1 Tax=Gnetum m... 69 1e-10 UniRef50_C7DIC2 Ribosomal protein S3-domain protein n=1 Tax=Cand... 69 1e-10 UniRef50_B3T598 Putative ribosomal protein S3, C-terminal domain... 69 1e-10 UniRef50_Q6E789 Ribosomal protein S3 n=1 Tax=Saprolegnia ferax R... 69 1e-10 UniRef50_A8B8Z2 Ribosomal protein S3 n=2 Tax=Giardia intestinali... 68 2e-10 UniRef50_D2DX66 Ribosomal protein S3 n=2 Tax=Taxaceae RepID=D2DX... 68 3e-10 UniRef50_O26116 30S ribosomal protein S3P n=6 Tax=Euryarchaeota ... 68 3e-10 UniRef50_A3MTL3 30S ribosomal protein S3P n=2 Tax=Thermoproteace... 67 6e-10 UniRef50_A4ZHA7 Ribosomal protein S3 n=8 Tax=Phytophthora RepID=... 66 1e-09 UniRef50_D2DX72 Ribosomal protein S3 n=1 Tax=Cephalotaxus sinens... 65 2e-09 UniRef50_D2DX51 Ribosomal protein S3 n=19 Tax=Cupressaceae RepID... 65 2e-09 UniRef50_UPI00016B245A 30S ribosomal protein S3 n=1 Tax=candidat... 64 4e-09 UniRef50_D2DX63 Ribosomal protein S3 n=1 Tax=Sciadopitys vertici... 64 4e-09 UniRef50_D2DXC4 Ribosomal protein S3 n=9 Tax=Cupressaceae RepID=... 63 7e-09 UniRef50_Q95749 Ribosomal protein S3, mitochondrial n=5 Tax=Bras... 63 1e-08 UniRef50_UPI000038E231 30S ribosomal protein S3P n=1 Tax=Ferropl... 62 1e-08 UniRef50_Q5PX34 Ribosomal protein S3 (Fragment) n=73 Tax=Halimed... 62 2e-08 UniRef50_B1L650 Ribosomal protein S3 n=1 Tax=Candidatus Korarcha... 61 3e-08 UniRef50_A4WIY8 30S ribosomal protein S3P n=4 Tax=Thermoproteace... 60 5e-08 UniRef50_A3DNB3 30S ribosomal protein S3P n=2 Tax=Desulfurococca... 60 5e-08 UniRef50_B9TAP3 60S ribosomal protein L16, putative n=2 Tax=Sper... 59 9e-08 UniRef50_A4KYC4 Ribosomal protein S3 (Fragment) n=3 Tax=Chrysoba... 59 1e-07 UniRef50_D2DX78 Ribosomal protein S3 n=2 Tax=Araucariaceae RepID... 59 2e-07 UniRef50_Q9G4C6 Ribosomal protein S3 n=1 Tax=Thraustochytrium au... 59 2e-07 UniRef50_Q8TX35 30S ribosomal protein S3P n=1 Tax=Methanopyrus k... 58 2e-07 UniRef50_O21249 Ribosomal protein S3 n=1 Tax=Reclinomonas americ... 58 2e-07 UniRef50_Q9G8W8 Ribosomal protein S3 n=1 Tax=Rhodomonas salina R... 58 3e-07 UniRef50_C1QG67 SSU ribosomal protein S3P n=1 Tax=Brachyspira mu... 56 1e-06 UniRef50_Q74MZ4 30S ribosomal protein S3P n=1 Tax=Nanoarchaeum e... 55 2e-06 UniRef50_Q8SQM3 40S ribosomal protein S3 n=2 Tax=Apansporoblasti... 55 2e-06 UniRef50_Q9MTE3 Ribosomal protein S3 n=1 Tax=Toxoplasma gondii R... 54 3e-06 UniRef50_Q6UVR6 Ribosomal protein S3 n=1 Tax=Pseudendoclonium ak... 54 4e-06 UniRef50_C1KR88 Ribosomal protein S3 n=1 Tax=Micromonas pusilla ... 54 4e-06 UniRef50_D2EEG8 KH type 2 domain protein n=1 Tax=Candidatus Parv... 54 6e-06 UniRef50_P48153 40S ribosomal protein S3 n=10 Tax=Eukaryota RepI... 52 2e-05 UniRef50_B9WLS6 Ribosomal protein, small subunit, putative n=5 T... 51 3e-05 UniRef50_Q9MG96 Ribosomal protein S3 n=1 Tax=Chrysodidymus synur... 50 5e-05 UniRef50_Q3S286 Ribosomal protein S3 n=1 Tax=Thalassiosira pseud... 50 7e-05 UniRef50_D2DXE7 Ribosomal protein S3 (Fragment) n=1 Tax=Welwitsc... 48 2e-04 UniRef50_A8J9X5 Predicted protein n=1 Tax=Chlamydomonas reinhard... 47 5e-04 UniRef50_P23396 40S ribosomal protein S3 n=252 Tax=root RepID=RS... 47 5e-04 UniRef50_Q9TAJ2 Ribosomal protein S3 n=1 Tax=Cafeteria roenberge... 47 5e-04 UniRef50_A9BL58 Rps3 n=1 Tax=Cryptophyta RepID=A9BL58_9CRYP 47 6e-04 UniRef50_Q25809 Rps3 protein n=1 Tax=Plasmodium falciparum 3D7 R... 46 8e-04 UniRef50_Q9ZZN7 30S ribosomal protein S3 n=1 Tax=Cyanidioschyzon... 46 8e-04 UniRef50_Q9G916 Ribosomal protein S3 n=1 Tax=Ochromonas danica R... 46 0.001 UniRef50_Q5ILK9 Ribosomal protein S3 n=2 Tax=Polysphondylium pal... 45 0.002 UniRef50_Q7YN77 Ribosomal protein S3 n=1 Tax=Eimeria tenella Rep... 44 0.005 UniRef50_B9SHX4 Chloroplast 30S ribosomal protein S7, putative n... 44 0.006 UniRef50_Q2TUB8 Ribosomal protein S3 n=1 Tax=Dictyota dichotoma ... 42 0.014 UniRef50_A7AXG9 Rps3 n=1 Tax=Babesia bovis RepID=A7AXG9_BABBO 42 0.017 UniRef50_C0QKZ3 MutL n=1 Tax=Desulfobacterium autotrophicum HRM2... 42 0.023 UniRef50_Q22AV9 KH domain containing protein n=3 Tax=Oligohymeno... 41 0.033 UniRef50_Q9G8Q4 Ribosomal protein S3 n=1 Tax=Naegleria gruberi R... 40 0.042 UniRef50_UPI000186EDB7 predicted protein n=1 Tax=Pediculus human... 40 0.068 UniRef50_Q2TUF7 Ribosomal protein S3 n=18 Tax=Phaeophyceae RepID... 40 0.090 >UniRef50_Q12GW5 30S ribosomal protein S3 n=397 Tax=Bacteria RepID=RS3_POLSJ Length = 301 Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 148/236 (62%), Positives = 183/236 (77%), Gaps = 10/236 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P G RL + + W S W+A+ ++FA L D KVR+YL +L A+VSR++IERP Sbjct: 1 MGQKINPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRVLIERP 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 AK+ R+TI +ARPG+VIGKKGED+E L+K ++ GVP +NI EVRKPE+DAKL+ADSI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELSRQLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 T QLE+R+MFRRAMKRA+QNAMRLGA GIK+ SGRL G EIAR EWYREGRVPLHTLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQ----PKKQQRKGR 232 DIDY TSEA TTYGVIGVKVW++KG+ LG + E P A+ P ++RK R Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLG------RGESPGAKLDAAPSDEERKPR 230 >UniRef50_B2T745 30S ribosomal protein S3 n=167 Tax=cellular organisms RepID=RS3_BURPP Length = 268 Score = 302 bits (773), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 140/209 (66%), Positives = 168/209 (80%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G RL + + W S W+AN FA L D VR+YL K+L ASV R+VIERP Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 AK+ R+TI ++RPG+VIGKKGED+E L+ + GVP +NI E+RKPE DA+L+ADSI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 T QLERR+MFRRAMKRA+QNAMRLGA+GIK+ +GRL G EIARTEWYREGRVPLHTLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 DIDY TSEA TTYG+IGVKVW++KG+ LG Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLG 209 >UniRef50_C9KPB3 Ribosomal protein S3 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPB3_9FIRM Length = 222 Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 128/208 (61%), Positives = 163/208 (78%), Gaps = 1/208 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P+GIRLGIVK W++ W+A+ K+FADNL D K+R YL L A VSRI ER Sbjct: 1 MGQKVNPHGIRLGIVKTWDAKWYAD-KDFADNLHEDIKIRDYLKNSLQAAGVSRIETERS 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +++TIHTA+PG+VIG+ G +E++++ + + INIAE+++P++DA LVA++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKNYTTKRVDINIAEIKQPDMDATLVAENI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLERR+ FRRAMK+AV MRLGAKGIK+ SGRLGGAEIAR E YREG +PLHTLRA Sbjct: 120 AQQLERRIAFRRAMKQAVGRTMRLGAKGIKIACSGRLGGAEIARKESYREGSIPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 DIDY T+EAHTTYG IG+KVWIFKGE+L Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVL 207 >UniRef50_D2QSG4 Ribosomal protein S3 n=15 Tax=Bacteria RepID=D2QSG4_9SPHI Length = 302 Score = 266 bits (679), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 125/209 (59%), Positives = 168/209 (80%), Gaps = 1/209 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P G+RLGIV+ W S+W+ KEF++ L D K+R+Y+ + K +++R+VIER Sbjct: 1 MGQKINPVGLRLGIVRGWESSWYGG-KEFSEKLVEDEKIRKYVAARIPKGAIARVVIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K + +TIHTARPGIVIGK G +V+K+++ + I G QINI E+++PE+DAKLV ++I Sbjct: 60 LKRVTLTIHTARPGIVIGKGGGEVDKIKEELKKITGKDVQINIFEIKRPEIDAKLVGEAI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL+ R+ FRRAMK+A+Q+A+R+GA+GIKV+VSGRLGGAEIAR+E Y+EGRVPLHTLRA Sbjct: 120 AQQLQARISFRRAMKQAIQSAIRVGAQGIKVKVSGRLGGAEIARSEQYKEGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 DIDY SEA T YG IG+KVWIFKGE+ G Sbjct: 180 DIDYAISEAQTVYGKIGIKVWIFKGEVYG 208 >UniRef50_A8PNP8 Ribosomal protein S3 n=2 Tax=Gammaproteobacteria RepID=A8PNP8_9COXI Length = 263 Score = 259 bits (661), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 126/209 (60%), Positives = 161/209 (77%), Gaps = 1/209 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFAN-TKEFADNLDSDFKVRQYLTKELAKASVSRIVIER 59 MG KV+P GIRLGI + + W+A ++E+ADNL D R+ + K L +A VS I IER Sbjct: 1 MGHKVNPVGIRLGITRTSTARWYAKKSREYADNLYYDLSARKLIEKALLQAGVSSIQIER 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 A+ ++TI A+PG+VIGKKGE +++LR + I VP ++++ EV+KPELDAKLVA++ Sbjct: 61 AARKSKITISVAKPGVVIGKKGEYIDQLRDQLEKIMRVPVRLSVLEVKKPELDAKLVAEN 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I QLERRVMFRRAMKRAVQ A+RLGA GIK+ V+GRLGGAEIAR+E Y+EG VPLHT R Sbjct: 121 IAQQLERRVMFRRAMKRAVQTALRLGALGIKITVAGRLGGAEIARSERYQEGSVPLHTFR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 ADIDY +EA TTYG +GVKVWI+KGE+ Sbjct: 181 ADIDYALAEAQTTYGKLGVKVWIYKGEVF 209 >UniRef50_Q01W98 30S ribosomal protein S3 n=172 Tax=Bacteria RepID=RS3_SOLUE Length = 344 Score = 255 bits (651), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 123/208 (59%), Positives = 157/208 (75%), Gaps = 1/208 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG KPW S WFA + +A L D +++ L + L A VS I ++RP Sbjct: 1 MGQKVHPYGFRLGFNKPWRSRWFAK-QGYAKLLQEDLELKAALRERLKSAGVSSIEVDRP 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +RVTI T+RPGI+IG+KG ++EKL++ +A I+I EV KPELDA+LV++SI Sbjct: 60 GNKLRVTIRTSRPGIIIGRKGAEIEKLKQDMAKKTKREVFIDIQEVHKPELDAQLVSESI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLE+RV FRRAM++AV +A+R G KGIKV VSGRL GAEIAR+EWY +G++PLHTLRA Sbjct: 120 ALQLEKRVAFRRAMRKAVDSALRFGCKGIKVRVSGRLNGAEIARSEWYLQGQLPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 DIDY +EAHTTYGVIG+K W++KGEIL Sbjct: 180 DIDYGFAEAHTTYGVIGIKAWLYKGEIL 207 >UniRef50_Q11QB8 30S ribosomal protein S3 n=26 Tax=Bacteria RepID=RS3_CYTH3 Length = 254 Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 118/209 (56%), Positives = 159/209 (76%), Gaps = 1/209 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G RLG+VK W S W+ K FAD L D ++R+Y+ + K +S+IVIER Sbjct: 1 MGQKVNPIGFRLGVVKGWESNWYGG-KTFADKLVEDEQIRKYVLARIPKGGISKIVIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K + +TI+TARPG+VIGK G +V+K+++ + I G QINI E+++PE++A LV +SI Sbjct: 60 IKRVTLTINTARPGVVIGKGGAEVDKIKEELKKITGKDVQINIFEIKRPEMEALLVGESI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL+ R+ +RRAMK+A+ MR+GA GIK+++SGRLGGAE+ART+ Y+EGR+PLHTLRA Sbjct: 120 AQQLKARISYRRAMKQAIAGTMRVGALGIKIKLSGRLGGAEMARTDQYKEGRIPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 DIDY SEA T YG IG+KVWIFKGE+ G Sbjct: 180 DIDYAVSEALTVYGKIGIKVWIFKGEVYG 208 >UniRef50_A6LEI5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=RS3_PARD8 Length = 244 Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 117/209 (55%), Positives = 159/209 (76%), Gaps = 1/209 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P RLGI++ W+S W+ K + D L D K+R+YL LAKASVSRIVIER Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWYGG-KNYGDTLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K I +T+ T+RPGI+IGK G++V+KL++ + I QINI EV++PELDA +VA++I Sbjct: 60 LKLITITVCTSRPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLE ++ +RRA+K A+ + MR+GA+GIK+++SGRL GAE+AR+E Y+EGR PLHTLRA Sbjct: 120 ARQLEGKIAYRRAVKMAIASTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 DIDY +EA T G++GVKVWI +GE+ G Sbjct: 180 DIDYALAEALTKVGLLGVKVWICRGEVYG 208 >UniRef50_B4CUY0 Ribosomal protein S3 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY0_9BACT Length = 251 Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 115/207 (55%), Positives = 156/207 (75%), Gaps = 1/207 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G RL + + W S W+A+ KE D L+SD K+R+Y+ +L A+VS+IVIER Sbjct: 1 MGQKVNPIGYRLAVNRDWRSRWYASPKELPDFLNSDLKIRRYVKDKLRLAAVSKIVIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA-GVPAQINIAEVRKPELDAKLVADS 119 SIRVTI TARPGIVIG+KG ++E + K + ++ G +I+I E++ PELDA+LVA++ Sbjct: 61 WNSIRVTIFTARPGIVIGRKGTEIENMTKEIERLSNGKSVKIDIQEIKTPELDAQLVAEN 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 + Q+ERR+ FRRAMK+++Q M GA+GIK+ +GRLGGAEI+R EWYREG++PLHTLR Sbjct: 121 VALQIERRISFRRAMKKSIQQTMEFGAQGIKLRCAGRLGGAEISRAEWYREGKIPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGE 206 IDY +EA+T YG IGVK W+ K E Sbjct: 181 QPIDYGFAEANTVYGKIGVKCWLCKPE 207 >UniRef50_Q0RRR5 30S ribosomal protein S3 n=406 Tax=cellular organisms RepID=RS3_FRAAA Length = 350 Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 115/218 (52%), Positives = 160/218 (73%), Gaps = 1/218 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P+G RLGI + S W+A+ K++ + D K+R+ +++ + +A +SR+ IER Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +RV IHTARPGIVIG++G + +++R + + G Q+NI EV+ PE+DA+LVA + Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL RV FRRAM++A+Q AM+ GAKGI+V+ SGRLGGAE++R+E+YREGRVPLHTLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE 218 DIDY EA T +G IGVKVWI+KG+I+ A E E Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDIVQSRAEREAQE 217 >UniRef50_UPI0001C30EBD ribosomal protein S3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30EBD Length = 395 Score = 242 bits (617), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 119/208 (57%), Positives = 151/208 (72%), Gaps = 1/208 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP +R+G + W S WF+ K F+D L D +R ++ L+ A +S I I + Sbjct: 1 MGQKVHPESLRVGYIHDWKSNWFSE-KNFSDYLVEDEAIRNHIVGRLSHAGLSDITIRKN 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 A + V I+TARPGIVIGK G +V+ LR+ + I ++NI E+++PELDA+LVA SI Sbjct: 60 ANEVEVNINTARPGIVIGKSGSEVDALRRDLHRITNKQVKVNILEIKRPELDARLVAQSI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL+ RV FRRAMKRA+ +AMR GAKG+KV+VSGRLGGAE+ARTE Y +GRVPLHTLRA Sbjct: 120 AEQLQNRVAFRRAMKRALTSAMRSGAKGVKVQVSGRLGGAEMARTEGYSDGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 DIDY EA TT+G IGVK WI KGEI+ Sbjct: 180 DIDYGFHEARTTFGRIGVKCWINKGEIM 207 >UniRef50_B5YDU9 30S ribosomal protein S3 n=194 Tax=Bacteria RepID=RS3_DICT6 Length = 245 Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/229 (52%), Positives = 161/229 (70%), Gaps = 5/229 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK HP G RLGI K W S W+A +++ L D+ +R YL K +A +S I IER Sbjct: 1 MGQKTHPYGFRLGITKDWKSHWYAERSDYSSLLHEDWAIRNYLKKNYYQAGISLIEIERK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 A + + +TIHTARPG++IG+ G ++E +RK + + +N+ EV+ PELDA+LVA++ Sbjct: 61 AANRVDITIHTARPGMLIGRGGSEIENIRKNLIKLTNKNVFVNVQEVKNPELDAQLVAEN 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+E+R+ ++RAMK+A+ A+R GAKGIKV SGRL GAEIAR+EW+REGR+PL TL Sbjct: 121 IAMQIEKRINYKRAMKQAINRALRAGAKGIKVMCSGRLNGAEIARSEWFREGRIPLQTLT 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEI--LGGMAAVEQPEKPAAQPKK 226 ADIDY +EA T GVIGVKVWI+KG++ L A E PEK A PKK Sbjct: 181 ADIDYGFAEAFTISGVIGVKVWIYKGDVPELHKEAIQELPEK--AVPKK 227 >UniRef50_C7M2X8 Ribosomal protein S3 n=2 Tax=Bacteria RepID=C7M2X8_ACIFD Length = 288 Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 126/221 (57%), Positives = 161/221 (72%), Gaps = 2/221 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG+ W S W+A+ K++ L D ++RQ+L +EL ASVSR+ IER Sbjct: 1 MGQKVHPYGFRLGVTTDWKSRWYAD-KDYQRWLIEDEQIRQWLQRELRTASVSRVDIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVAD-IAGVPAQINIAEVRKPELDAKLVADS 119 +RV IHTARPGIVIGKKG +VE+LR+ + A Q+N+ E+R+P+LDA +VA S Sbjct: 60 RDRVRVDIHTARPGIVIGKKGVEVERLRRELERRCAPARVQLNVEEIRQPDLDATIVAQS 119 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ RRV FRRAMKRA+Q AM+ GA+GI + SGRLGGAE+AR E +REGRVP HTLR Sbjct: 120 IADQISRRVSFRRAMKRAIQVAMKEGARGITAQCSGRLGGAEMARRETHREGRVPRHTLR 179 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKP 220 ADID+ EA TTYG IGVKVWI+KG+++ QP++P Sbjct: 180 ADIDFGLREARTTYGQIGVKVWIYKGDVVPYQTLTSQPQRP 220 >UniRef50_Q3KLH5 30S ribosomal protein S3 n=13 Tax=Chlamydiaceae RepID=RS3_CHLTA Length = 224 Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 114/202 (56%), Positives = 147/202 (72%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK P G R + K W S W+ N +EF L D K+R++L K+ + + V++R Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + I VTIHTARPG+VIGKKG +VE L+ + + G + IAEV++PEL+A+LVAD I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+ERRV FRRAMK+A+Q+ M GA G+KV+VSGRL GAEIAR+EWY+ GRVPLHTLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWI 202 DIDY T+ A TTYG+IG+KVWI Sbjct: 181 DIDYATASAETTYGIIGIKVWI 202 >UniRef50_Q3ZZL8 30S ribosomal protein S3 n=38 Tax=Bacteria RepID=RS3_DEHSC Length = 278 Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 110/208 (52%), Positives = 154/208 (74%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG+KVHP G RLGI+K W++ W A+ K FA+ L D K+R+ ++K+ A++S++ IER Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKNFAECLTEDLKLRKAISKKYVDAAISQVDIERQ 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + + V++ TARPGIVIG+ G+ V+++R + D+ G Q+NI E+ + ELDA LVA S+ Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEDLIGKKVQLNIVEISQAELDAFLVARSV 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+ERRV +RRAMK+A+ +M+ GAKGIK+ SGRLGG EIAR E EGRVPLHTLRA Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKICASGRLGGVEIARREVMHEGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 DIDY + AHT G +G+KVW+++G+IL Sbjct: 181 DIDYGCTRAHTALGDVGIKVWVYRGDIL 208 >UniRef50_C6XHI5 30S ribosomal protein S3 n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHI5_LIBAP Length = 227 Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 110/202 (54%), Positives = 148/202 (73%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWI 202 IDY T+ A T YG G+KV++ Sbjct: 181 HIDYGTAVAETAYGSCGIKVYV 202 >UniRef50_Q1IX78 30S ribosomal protein S3 n=2 Tax=Deinococcus RepID=RS3_DEIGD Length = 248 Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 119/235 (50%), Positives = 160/235 (68%), Gaps = 8/235 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++PNG RLGI K WNS W+A K+++ L D K+R+ ++++LA A ++RI IER Sbjct: 1 MGNKINPNGFRLGITKGWNSRWYAGKKQYSQLLKEDEKIRKLVSQKLAAAGIARIEIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADI--AGVPAQINIAEVRKPELDAKLVAD 118 + + V I A+PGIVIGK GE +++LR + + AG A +N+AE+ P + A LVA Sbjct: 61 GQQVNVIISAAKPGIVIGKGGESIKQLRGEIERLVSAGTVA-VNVAEIPNPNISAPLVAL 119 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 I Q+ERR FRRAMK+A Q M GA+G+KV +SGRLGGAE ARTE EGRVPLHTL Sbjct: 120 RIAEQIERRFAFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTL 179 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 RADIDY T+ A TTYG +G+KV +F GE++GG + E A P+K + R+ Sbjct: 180 RADIDYGTARAETTYGSLGIKVLVFNGEVIGG-----KTETLARPPRKSDERRRE 229 >UniRef50_Q3APH9 30S ribosomal protein S3 n=8 Tax=Chlorobium/Pelodictyon group RepID=RS3_CHLCH Length = 253 Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 153/210 (72%), Gaps = 2/210 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--ASVSRIVIE 58 MGQKV+P G RLGI++ W S W+ ++ ++ + D +R Y+ L K A ++RI IE Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVISEKIKQDHIIRNYVLARLKKERAGIARINIE 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVAD 118 R K +++ I+ ARPG V+G+KGE++ L + ++ I G +I++ EV KPE++A+L+ + Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELSRIIGKEVKIDVVEVIKPEIEAQLIGE 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 +I QLE RV FRRAMK+A+Q AMR GA+G+++ +GRLGGAEIAR E Y+EG++PLHT+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 RA++DY + AHT G IG+KVW++KGE+L Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVL 210 >UniRef50_B4U750 30S ribosomal protein S3 n=6 Tax=Bacteria RepID=RS3_HYDS0 Length = 231 Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 106/211 (50%), Positives = 152/211 (72%), Gaps = 1/211 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK HP G R+G+ K W S W + KE+ + L D +R+Y+ + A +S++ IER Sbjct: 1 MGQKTHPIGFRIGVTKDWLSKWCTSKKEYPNTLHEDIVIRKYIKERYKSAGISKVTIERS 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA-GVPAQINIAEVRKPELDAKLVADS 119 + IRV I +++PGI+IG+KG +V++L+ + I +++ EVR P+LDA+LVA+ Sbjct: 61 GEKIRVRILSSKPGIIIGRKGAEVDQLKNDLERIVKNKDISLSVDEVRVPQLDAQLVAED 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ERRV RRAMKRA+ NA++ GAKGIKV+V GR+GGA++AR EW+ GR+PL TLR Sbjct: 121 IALQIERRVSHRRAMKRAIDNAIKSGAKGIKVQVKGRIGGADLARAEWFLVGRMPLQTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210 ADIDY + A+T YG++G+KVWI+KG+IL G Sbjct: 181 ADIDYGYATAYTKYGILGIKVWIYKGDILKG 211 >UniRef50_C1CXG0 30S ribosomal protein S3 n=61 Tax=Bacteria RepID=RS3_DEIDV Length = 248 Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 112/212 (52%), Positives = 151/212 (71%), Gaps = 3/212 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++PNG RLGI + WNS W+A K++A L D K+R+ + K+L+ A ++R+ IER Sbjct: 1 MGNKINPNGFRLGITRGWNSRWYAGKKQYAGLLKEDEKIRKLVDKKLSAAGIARVEIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADI--AGVPAQINIAEVRKPELDAKLVAD 118 + + V I A+PGIVIGK G+ +++LR + + AG A +N+AE+ P + A LVA Sbjct: 61 GQQVNVIISAAKPGIVIGKGGDSIKQLRADIEKLVSAGTVA-VNVAEIPNPNISAPLVAL 119 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 I Q+ERR FRRAMK+A Q M GA+G+KV +SGRLGGAE AR E REGRVPLHTL Sbjct: 120 RIAEQIERRFAFRRAMKQAAQRVMESGARGVKVVLSGRLGGAEQARRETVREGRVPLHTL 179 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210 RADIDY T+ A TTYG++G+KV +F GE++GG Sbjct: 180 RADIDYGTALARTTYGILGIKVMVFTGEVIGG 211 >UniRef50_Q04G79 30S ribosomal protein S3 n=3 Tax=cellular organisms RepID=RS3_OENOB Length = 267 Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 111/217 (51%), Positives = 149/217 (68%), Gaps = 7/217 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P G R+G+++ W++ W+A+ KE+ L D ++R+YL L A+V RI IER Sbjct: 1 MGQKINPIGFRVGVIRDWDAKWYADKKEYVPALQEDLRIRKYLETNLKDAAVDRITIERT 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP------AQINIAEVRKPELDA 113 + I +TIHTA+PGIVIG+ G DVE+LR ++ I INI E+RKP+L+A Sbjct: 61 EPTRINLTIHTAKPGIVIGRGGADVERLRSELSKIVDTYKGQHKRVNINIVEIRKPDLNA 120 Query: 114 KLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 LV I + LERRV FRRAM+ A+Q R GAKG++ VSGRL GA+IAR E Y EG V Sbjct: 121 HLVGQQIAADLERRVAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTV 180 Query: 174 PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210 PLHTLRADIDY+ EA T+YG +G+K WI++G+ G Sbjct: 181 PLHTLRADIDYSWDEAMTSYGNLGIKTWIYRGDAENG 217 >UniRef50_C7H0X5 Ribosomal protein S3 n=8 Tax=Bacteria RepID=C7H0X5_9FIRM Length = 300 Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 114/209 (54%), Positives = 151/209 (72%), Gaps = 1/209 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV P+G+R+GI K W S W+A+ K FAD L D +R+++ +L A VS+I+IERP Sbjct: 1 MGQKVSPHGLRVGINKEWGSKWYADKKSFADFLAEDKAIREHVKTKLYGAGVSKILIERP 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 A+ ++V I R G+VIGK G+ E ++K +A + G ++I +V + ELDA+L A+ Sbjct: 61 AEDKVKVIIAVGRSGMVIGKGGDGHEAIKKSLAKLTGKEVAVDIRQVGRTELDAQLTAER 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I LE+RV +RRAMK+A+ AM+ GAKGIK+ VSGRLGGAEIAR E Y EG VPLHTLR Sbjct: 121 IAEDLEKRVSYRRAMKQAMGRAMKAGAKGIKLLVSGRLGGAEIARDEKYSEGNVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 +DIDY +EA TTYG +GVK+WI GEIL Sbjct: 181 SDIDYGFAEADTTYGKLGVKIWINHGEIL 209 >UniRef50_A9NED9 30S ribosomal protein S3 n=175 Tax=Bacteria RepID=RS3_ACHLI Length = 256 Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 6/238 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER- 59 MGQK +PNG+RLGI++ W S W+A+ K+ + D +R++L + +KA VS+I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESKWYADQKDVPALIKEDALIREFLNENFSKAGVSQIEIERV 60 Query: 60 PAKS---IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLV 116 AKS + + ++ ++PGI +GK+ K + + +NI EVR+PE A LV Sbjct: 61 KAKSKERVTIKLYVSKPGIALGKEASVKNKAVSTLEYLTKKEVILNIIEVRRPEKVAVLV 120 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 A SI QLE R FRRA K A+Q A++ GAKGI+ VSGRLGGAE+AR+E Y EGRVPLH Sbjct: 121 AQSIAEQLENRASFRRAQKMAIQRALKSGAKGIRTLVSGRLGGAEMARSEGYSEGRVPLH 180 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVE--QPEKPAAQPKKQQRKGR 232 TLRAD+DY T+EA TTYG++G+KVWI+ GE+L G + ++ +P + Q + Q+R+ R Sbjct: 181 TLRADVDYATAEAKTTYGILGIKVWIYHGEVLPGQSILDTRKPFEAGNQKRGQKRRPR 238 >UniRef50_B0SA41 30S ribosomal protein S3 n=6 Tax=Leptospira RepID=RS3_LEPBA Length = 225 Score = 219 bits (558), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 101/208 (48%), Positives = 153/208 (73%), Gaps = 1/208 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G+R+GI + W+S WF+ +++ NL D K+R++L K+ ASV +I+IER Sbjct: 1 MGQKVNPIGLRIGITRNWDSVWFSK-QDYIKNLHEDIKIRRFLQKKFKNASVVKIIIERF 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + I V +HT++PG+VIG+KG+++E +++ + A P +NI EV+KPE+ A+ +A+++ Sbjct: 60 PEKINVNLHTSKPGMVIGQKGQNIEAVKQELKKFADKPIGMNIIEVKKPEIIAQAIAETV 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+E+R+ FRR MK ++ AMR G +G+K+++SGRL GA++ARTE Y EGRVPLHTLRA Sbjct: 120 ALQIEQRMPFRRVMKAELRRAMRGGVEGVKIQISGRLNGADMARTEKYMEGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 ID+ EA TT+G IGVKVW + G+ Sbjct: 180 KIDFGFKEALTTFGQIGVKVWTYTGDYF 207 >UniRef50_A9FGJ7 30S ribosomal protein S3 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=RS3_SORC5 Length = 230 Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 150/222 (67%), Gaps = 14/222 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK HP G R+G++K W+S W+ + + L D ++++ + + L A+++ + IER Sbjct: 1 MGQKTHPYGFRVGVIKTWSSKWYEDGAAYQKWLHQDIRIKRAIKQYLYNANIAGVEIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKV--------------VADIAGVPAQINIAEV 106 A +V + TARPG+VIGK G+ +E L+ V+ I++ EV Sbjct: 61 ANRAKVIVFTARPGMVIGKGGKGIETLKSGNVGTASKGETLFPGVSSFTDNEVFIDVQEV 120 Query: 107 RKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTE 166 RK E +A+LVA++I +QLERR+ FRRAMK+AV AM+ GAKGI+V +GRLGG+E++R E Sbjct: 121 RKAETNAQLVAENIATQLERRIAFRRAMKKAVSTAMKFGAKGIRVRCAGRLGGSEMSRVE 180 Query: 167 WYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 YREGRVPLHTLRADI++ +EA T G+IGVKVW+FKGE+L Sbjct: 181 TYREGRVPLHTLRADIEFGLAEARTKVGIIGVKVWMFKGEVL 222 >UniRef50_B2KEL5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=RS3_ELUMP Length = 239 Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 106/204 (51%), Positives = 140/204 (68%), Gaps = 1/204 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++P G+RLG + W S WFA K + D ++R+ + + A++S + IER Sbjct: 1 MGHKINPKGLRLGYTQDWQSRWFA-PKNMPALIIEDKRIRELIEERFKMAAISFVGIERA 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +R+ IHTARPG+VIGKKG D+E+LRK + + G +N+ E++ PE DA LVA SI Sbjct: 60 GAFLRINIHTARPGVVIGKKGADIEQLRKDLEKMTGSKTFVNVVEIKNPETDASLVAQSI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+E+R + AMK+A++ A+ A GIK+ VSGRLGGAEIARTEW REGRVPLHTL A Sbjct: 120 CMQIEKRAHYGAAMKKAIEKALAGKALGIKIMVSGRLGGAEIARTEWKREGRVPLHTLCA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFK 204 +IDY T+EA T G IG KVWIFK Sbjct: 180 EIDYGTAEAMTISGKIGCKVWIFK 203 >UniRef50_UPI0001AEC3A6 30S ribosomal protein S3 n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC3A6 Length = 151 Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 98/123 (79%), Positives = 111/123 (90%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP GIRLGI KPW STW+ANT ++ADNL +D +VRQYLTK+L AS+S+IVIERP Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADNLYNDHQVRQYLTKQLKNASLSKIVIERP 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 AKSIRVTIHTARPG+VIGKKGEDVEKLR V+ +AGVPAQINIAEVRKPELD +LVADSI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRNYVSKLAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 TSQ 123 +SQ Sbjct: 121 SSQ 123 >UniRef50_C1XH61 SSU ribosomal protein S3P n=2 Tax=Meiothermus RepID=C1XH61_MEIRU Length = 253 Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 102/211 (48%), Positives = 144/211 (68%), Gaps = 1/211 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++P G+RLGI + + S W+A K +A L+ D +R + KEL +A ++RI IER Sbjct: 1 MGNKINPVGLRLGITRDFESRWYAGKKAYAKTLEEDRLIRALIEKELHQAGLARIDIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVV-ADIAGVPAQINIAEVRKPELDAKLVADS 119 A ++ V ++ A+PG+VIG+ GE +++LR+ + + G +N+ EV P L A LVA Sbjct: 61 ADNVTVMVYAAKPGVVIGRGGETIKRLRETLQSRFPGKTVALNVQEVGNPNLSAPLVAQR 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 + Q+ERR RR++K+AVQ GA G K+ VSGR+GGAE AR EW EGRVPLHTLR Sbjct: 121 VAEQIERRFAVRRSIKQAVQRVRESGALGAKIVVSGRIGGAEQARVEWAAEGRVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210 A+IDY T+ A TTYG +GVK ++F GE++GG Sbjct: 181 ANIDYGTARAETTYGSLGVKAYVFMGEVIGG 211 >UniRef50_B2S2E2 30S ribosomal protein S3 n=2 Tax=Treponema pallidum RepID=RS3_TREPS Length = 247 Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 102/211 (48%), Positives = 142/211 (67%), Gaps = 2/211 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK--ELAKASVSRIVIE 58 MGQKV P G+RLGI K W+S W+A +E+A L D ++R + E A ++ + I Sbjct: 1 MGQKVSPIGLRLGINKVWSSRWYAGPREYAALLHEDLRIRSMIRSFPECKNADIAEVEIV 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVAD 118 R + + V +HTARPG+VIG KG ++EK+ V QI + E+++ EL+A LVA Sbjct: 61 RHPQRVTVVMHTARPGVVIGAKGVNIEKIGAEVQKRLNKKVQIKVKEIKRMELNAYLVAQ 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 ++ QL RV FR+ +++A M+ GA+G+K+ VSGRLGGAE++RTE +EGR PLHTL Sbjct: 121 NVARQLTARVSFRKCLRQACAGTMKSGAQGVKIRVSGRLGGAEMSRTEEIKEGRTPLHTL 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 RADIDY +EAHTTYG IGVKVW++ G + G Sbjct: 181 RADIDYGFAEAHTTYGSIGVKVWLYSGMMYG 211 >UniRef50_Q2GED3 30S ribosomal protein S3 n=2 Tax=Neorickettsia RepID=RS3_NEOSM Length = 211 Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 137/209 (65%), Gaps = 1/209 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G RL S W++ + ++A + D+ V +Y+ A +S+++I+R Sbjct: 1 MGQKVNPVGFRLWTHGSHGSVWYSKSCDYAKTVAEDYFVTKYVESSFAHIGISKVIIKRK 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 S +T+H +PG++IGKKG D+E R + G +N+ EV+KP A LVA SI Sbjct: 61 GASCDITLHCMKPGLIIGKKGADLESFRLKLNKKFGFVPSLNVVEVKKPNSSAVLVAKSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 QLE+R FRR +K+A+ MR KG+KV SGRL GAEIARTE ++EG +PLHT+R Sbjct: 121 AFQLEKRSSFRRVIKKAIATVMRESDVKGVKVACSGRLSGAEIARTEVFKEGSIPLHTMR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 ADIDY +EAHTTYGVIGVKVWI++G I Sbjct: 181 ADIDYWVAEAHTTYGVIGVKVWIYRGNIF 209 >UniRef50_B3CT11 30S ribosomal protein S3 n=2 Tax=Orientia tsutsugamushi RepID=RS3_ORITI Length = 219 Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 144/210 (68%), Gaps = 3/210 (1%) Query: 1 MGQKVHPNGIRLGIVKP--WNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIE 58 MGQKV+P R G P W S +AN ++D L K+R+ + E + A +++I+IE Sbjct: 1 MGQKVNPCIFRTGPNLPRNWESVLYANKNNYSDFLLKILKIRKIINTEYSFAQITKILIE 60 Query: 59 RPA-KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVA 117 P+ K+I V I+ + G++IGK G D+EKL++ +A I INI EV+KPEL+ +A Sbjct: 61 WPSSKNIVVNIYAKKIGVIIGKSGGDIEKLKQNIAKITSADVSINICEVKKPELEEAFIA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 +I QLERR F++ MK+A+ +M+ GAKGIK+ SGRLGG EIAR+E Y+EGRVPL T Sbjct: 121 QTIAQQLERRQSFKKVMKKAIHASMKQGAKGIKIICSGRLGGVEIARSESYKEGRVPLQT 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEI 207 +RADI Y +EA TTYGVIGVKVW+++ ++ Sbjct: 181 IRADIRYAFAEAITTYGVIGVKVWVYRCDV 210 >UniRef50_C1KRC6 30S ribosomal protein S3, chloroplastic n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1KRC6_9CHLO Length = 227 Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 99/210 (47%), Positives = 147/210 (70%), Gaps = 6/210 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G R+G+ + S WFA K++A+ + D +R Y+ K L+ AS+SR+ I R Sbjct: 1 MGQKVHPLGFRIGVTQTHRSQWFAKPKDYANLVKEDLVIRDYVAKHLSDASISRVNISRQ 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIA----EVRKPELDAKLV 116 I + TARP ++G KGE + K+R+ ++ A +PA ++A + +PE+DA + Sbjct: 61 VDRIEIEFFTARPRALVGAKGEALVKVREALS--AKLPAHRSVALYVTKTVQPEVDAVCI 118 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 A++I QLE+R FRR +++A+++A + GA GIKV+++GRL GAEIAR+EW REGRVPLH Sbjct: 119 AENIAMQLEKRAPFRRTIRQALRSAQQAGAVGIKVKIAGRLNGAEIARSEWSREGRVPLH 178 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 T+RADIDY T+ A T YG++G+KVW+ K + Sbjct: 179 TIRADIDYATARALTVYGILGIKVWVCKDD 208 >UniRef50_P19169 30S ribosomal protein S3, chloroplastic n=1 Tax=Euglena gracilis RepID=RR3_EUGGR Length = 218 Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 105/217 (48%), Positives = 140/217 (64%), Gaps = 13/217 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI K +S W+ + +A + D +R ++ KEL + +S I IER Sbjct: 1 MGQKVHPLGFRLGITKSHSSFWYVERRHYASFVKEDIVIRNFMNKELLETLISLIKIERI 60 Query: 61 AK------SIRVTIHTARPGIVIGKKGEDVEKLRKVVAD-----IAGVPAQIN--IAEVR 107 + + V IH ARP VIG+ G+ + ++R ++ D + P I + V Sbjct: 61 YEFSEQRNNTIVYIHVARPERVIGRDGQGLSRIRDILIDRMNYLLGKTPRIITCKVVGVT 120 Query: 108 KPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEW 167 P LDA+L+ADS+ +LE+R F RAMK + AM+ GA+GIKV+VSGRL G EIARTEW Sbjct: 121 SPNLDARLLADSVRRELEKRTPFIRAMKTVMLQAMKAGAEGIKVQVSGRLNGIEIARTEW 180 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 +REGRVPLHTLRADIDY AHT YGV+G+KVW++K Sbjct: 181 FREGRVPLHTLRADIDYFNDIAHTIYGVLGIKVWVYK 217 >UniRef50_B7J249 30S ribosomal protein S3 n=23 Tax=Bacteria RepID=RS3_BORBZ Length = 293 Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 145/212 (68%), Gaps = 3/212 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELA--KASVSRI-VI 57 MGQKVHP +R+ I K W S W+ + K ++ L DF +R+ + K L K +S I +I Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 58 ERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVA 117 + + V I T RPG VIG KG ++EK+ +++ I I EV++PELDA+++A Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 + I Q+E R +R+ +K ++ +M GA+G+K++++GRLGGAEIAR+ +EGRVPLHT Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 LRA+IDY SEA TTYG+IGVKVW+FKGE+LG Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLG 212 >UniRef50_Q7UN14 30S ribosomal protein S3 n=5 Tax=Planctomycetaceae RepID=RS3_RHOBA Length = 236 Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 96/210 (45%), Positives = 141/210 (67%), Gaps = 5/210 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK-----ELAKASVSRI 55 MGQKV+P R G+ + W S W+A+ ++FAD L D K+R+++TK + A + RI Sbjct: 1 MGQKVNPIAFRTGVTRGWGSRWYASKQDFADLLVEDRKIREFITKHPKKSQYKSAGIDRI 60 Query: 56 VIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKL 115 IER +RV ++ ARPG++IGKKG+++E L+ + ++ G + + EV +PEL A+L Sbjct: 61 EIERTRDEVRVMLYVARPGLIIGKKGQEIEILQAELQNLVGRRINLKVEEVGRPELQAQL 120 Query: 116 VADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPL 175 VA+ I+ QL +R FRR MKR ++ M GAKGIK++++GRLGGAE+AR E G +PL Sbjct: 121 VAEDISQQLAKRSSFRRTMKRMLEQTMDAGAKGIKIQMAGRLGGAEMARREKQSAGSIPL 180 Query: 176 HTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 TL+A IDY +EA T G IG++VWI +G Sbjct: 181 STLQAKIDYGFTEAMTPQGHIGIQVWINQG 210 >UniRef50_Q8YPI5 30S ribosomal protein S3 n=228 Tax=cellular organisms RepID=RS3_ANASP Length = 260 Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 112/217 (51%), Positives = 151/217 (69%), Gaps = 7/217 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK-----ASVSRI 55 MGQK+HP G RLGI + S WFA + + L D K+RQY+ ++L + A +S + Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAEPSRYPELLQEDHKLRQYIEQKLGRLAQNNAGISEV 60 Query: 56 VIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQI--NIAEVRKPELDA 113 IER A I + + TARPG+V+G+ G+ +E LR + + G QI N+ EV++ + DA Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIEALRTGLQTLLGGNRQIRINVVEVQRVDADA 120 Query: 114 KLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 L+A+ I QLERRV FRR +++A+Q A + G +GIKV+VSGRL GAEIARTEW REGRV Sbjct: 121 YLIAEFIAQQLERRVSFRRVVRQAIQRAQKAGIQGIKVQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210 PLHTLRADIDY+ A T YG++G+KVW+FKGEI+ G Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPG 217 >UniRef50_D2ISA0 Ribosomal protein S3 n=1 Tax=Cryptomonas paramecium RepID=D2ISA0_9CRYP Length = 217 Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 138/209 (66%), Gaps = 2/209 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG+V S+W A+ + L DF +R+Y + A +S I I R Sbjct: 1 MGQKVHPLGFRLGVVYRHRSSWVADKGNYPSYLKEDFLLRKYFSSRFLDAGISTIEIHRR 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPA--QINIAEVRKPELDAKLVAD 118 I + ++ +RP ++ ++++++ + ++ A ++++ + P+LDA L+A Sbjct: 61 LTYIDLYLYASRPNALMANSQAAIKEIKEYLRNLGANDACFRVHVLALLHPDLDAYLLAT 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 I+ QLE+R+ FR+ M++A++ A + GAKGIKV++SGRLGGAEI+R+EW REGRVPL TL Sbjct: 121 FISQQLEKRISFRKVMQQAIRRARKAGAKGIKVQISGRLGGAEISRSEWKREGRVPLQTL 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEI 207 ADI+Y EAHT YGV+GVKVWIF+ E Sbjct: 181 YADINYAAKEAHTNYGVLGVKVWIFRREF 209 >UniRef50_B3PMP1 30S ribosomal protein S3 n=4 Tax=Mycoplasma RepID=RS3_MYCA5 Length = 247 Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 97/233 (41%), Positives = 144/233 (61%), Gaps = 4/233 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+PNG R GI K NS W+A+ +FA +L D K+ + K++ + + + I+R Sbjct: 1 MGQKVNPNGFRYGITKAHNSVWYADKMQFASHLLEDQKIYDFFDKKVRQLQIGNVQIKRN 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG---VPAQINIAEVRKPELDAKLV 116 I + ++TA+P +++G GE+++ L K + I I + E++KP+L+A+L+ Sbjct: 61 QNGLILIYVYTAKPAVMLGTNGENIKNLTKDLQKILKNKKANISIQVIELKKPDLNARLL 120 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 A+ I +LE R FR A K A++ A++ GAKGIK VSGRL G ++ARTE Y EG + LH Sbjct: 121 AEDIAIKLENRGSFRLAQKFAIKAALKAGAKGIKTSVSGRLNGVDMARTEGYNEGEMKLH 180 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQR 229 TLR D+DY + A TTYG++GVKVW+ GEIL +Q E K +R Sbjct: 181 TLRQDVDYAATTAKTTYGILGVKVWVSLGEILSDEQKAKQEEMDLLNAPKDRR 233 >UniRef50_C7BEM5 30S ribosomal protein S3, chloroplastic n=2 Tax=Chlorophyta RepID=C7BEM5_PEDMN Length = 233 Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 100/232 (43%), Positives = 135/232 (58%), Gaps = 26/232 (11%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G+RLGI + S W+A T++++ + D +R YL +A +SRI I+R Sbjct: 1 MGQKIHPLGLRLGITQNPRSYWYAPTEQYSYLVVEDSILRNYLNNTYKEAGISRINIQRK 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA------------------------- 95 I V + ARP I +GK + +E LR+ + A Sbjct: 61 LNQIYVEVLAARPAIFVGKDTKGIESLRQTLEQKALSYRHDLVQHYGSSFFNEERGTILF 120 Query: 96 -GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 + + E PE DA + D + QLE+RV FRRA+++A+Q A R KGIK++VS Sbjct: 121 QNPKVVLQVTERVNPEDDAAFLGDFVVEQLEKRVAFRRAVRQAMQRAQRARVKGIKIQVS 180 Query: 155 GRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 GRL GAEIARTEW REGRVPL TLRA+IDY+ A T YG++GVKVW+FK E Sbjct: 181 GRLNGAEIARTEWVREGRVPLQTLRANIDYSYKTARTIYGLLGVKVWVFKNE 232 >UniRef50_B4S097 30S ribosomal protein S3 n=2 Tax=Alteromonas macleodii RepID=B4S097_ALTMD Length = 143 Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 90/111 (81%), Positives = 99/111 (89%), Gaps = 1/111 (0%) Query: 123 QLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADI 182 +LERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR+EWYREGRVPLHT RADI Sbjct: 32 KLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTFRADI 91 Query: 183 DYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 DY TSEA TTYG+IGVKVWIFKGE+LGG+ Q + PAAQPKK+ R ++ Sbjct: 92 DYATSEASTTYGIIGVKVWIFKGEVLGGLPTT-QEQAPAAQPKKKGRNAKR 141 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 27/50 (54%), Positives = 35/50 (70%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA 50 MGQKVHP GIRLGI KPW STW+ANT ++AD L+ R+ + + + A Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADKLERRVMFRRAMKRAVQNA 50 >UniRef50_C0JWQ0 30S ribosomal protein S3, chloroplastic n=1 Tax=Monomastix sp. OKE-1 RepID=C0JWQ0_MONSK Length = 235 Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/229 (42%), Positives = 143/229 (62%), Gaps = 24/229 (10%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFA-----NTKE----FADNLDSDFKVRQYLTKELAKAS 51 MGQK+HP G+R+GI + S WFA N+ + +A ++ D VR + + EL A Sbjct: 1 MGQKIHPLGLRIGIFQKHKSEWFAPVGSSNSNQSIPNYAAFIEQDKGVRDFFSSELRDAG 60 Query: 52 VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDV----EKLRKVVADI--------AGVPA 99 +S+I+I R + V +H A+P +V+G+ G ++ EK +K + + PA Sbjct: 61 LSKILISRRTNRLFVELHVAQPKLVLGENGNNLKQLTEKFQKNIQKLLSRHNNPSMSAPA 120 Query: 100 -QINIAEVRKPEL--DAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 I + ++ + E+ DA L+ I QLE+RV FRR MK+++Q A GA+GIK++++GR Sbjct: 121 LSIQVVQIPQEEIATDATLLGQKIAEQLEKRVAFRRVMKQSIQQARAAGAEGIKIQIAGR 180 Query: 157 LGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 L GAEIARTEW REGRVPL TL+A+IDY A T YG++G+K+WIFKG Sbjct: 181 LNGAEIARTEWAREGRVPLQTLKANIDYCYETAQTIYGILGIKIWIFKG 229 >UniRef50_C0JWV6 30S ribosomal protein S3, chloroplastic n=1 Tax=Pycnococcus provasolii RepID=C0JWV6_9CHLO Length = 286 Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 138/218 (63%), Gaps = 14/218 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL--AKASVSRIVIE 58 MGQKV+P G RLG + S WFA++++++ L D VR++LT+E ++ +S + Sbjct: 1 MGQKVNPFGFRLGYSQHHRSDWFASSQDYSKKLQEDLLVRKFLTREFPDTESGISAVYTR 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGED------VEKLRKVVADI-----AGVPAQINIAEVR 107 R + + + IHTARP +++G E V L +V D+ +P + + E Sbjct: 61 RKGQLLSLEIHTARPRVLLGSNQETQDPTNRVSGLVQVRRDLEKLFPQKIPLSLRLVEET 120 Query: 108 KPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL-GAKGIKVEVSGRLGGAEIARTE 166 +P+ + L+A S+ QLE+RV FRRA+K+ ++ A G G+KV++SGRL GAEIAR+E Sbjct: 121 QPDSNVALLAASLAHQLEKRVAFRRALKQTIKRAQTARGVLGVKVQISGRLNGAEIARSE 180 Query: 167 WYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 W REGRVPLHTLRA++DY T A T YG +G+KVW++K Sbjct: 181 WVREGRVPLHTLRAEVDYATHTARTLYGCLGIKVWLYK 218 >UniRef50_B1AIM6 30S ribosomal protein S3 n=101 Tax=Bacteria RepID=RS3_UREP2 Length = 257 Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTK-EFADNLDSDFKVRQYLTKELAKASVSRIVIER 59 MGQKV+PNG+R GI K W S W + + A L D K+R+YL+ + A + + IER Sbjct: 1 MGQKVNPNGLRFGINKQWLSRWVPTDQLQMAKWLVEDDKIRKYLSTKYKNAGIDHVEIER 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP--AQINIAEVRKPELDAKLVA 117 + + V ++ + G++IG + + + + + I G + + EV+ PEL A L+A Sbjct: 61 DQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVGRKQLVSLKVVEVQIPELQASLMA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 I +E RV FR A K ++ ++ GA+GIK VSGRLGG E+AR E Y +G + LHT Sbjct: 121 REIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVSGRLGGVEMAREEGYTQGVMTLHT 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 LRADIDY+ EAHTTYG+IGVKVWI +GE+ G Sbjct: 181 LRADIDYSMQEAHTTYGIIGVKVWINRGELFG 212 >UniRef50_C0QW02 30S ribosomal protein S3 n=3 Tax=Brachyspira RepID=C0QW02_BRAHW Length = 202 Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 92/164 (56%), Positives = 113/164 (68%) Query: 45 KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIA 104 KE ++S I I R I + I TAR G+VIG KG+ VE ++ V + P +I Sbjct: 19 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKPVHFSIT 78 Query: 105 EVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 164 E+R ELDA L A S+ QLE RV FRRAMK + AM+ GAKGIKV SGRL GA+IAR Sbjct: 79 EIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIAR 138 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 TE Y+ G VPLHTLRA+IDY T+EA TT+G+IG+KVWI+KGEIL Sbjct: 139 TEQYKNGSVPLHTLRANIDYGTAEALTTFGIIGIKVWIYKGEIL 182 >UniRef50_Q20F10 30S ribosomal protein S3, chloroplastic n=2 Tax=Chlorophyta RepID=RR3_OLTVI Length = 235 Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 96/235 (40%), Positives = 140/235 (59%), Gaps = 20/235 (8%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG+ + S WFA +E++ + D +R+ L K + + + I+R Sbjct: 1 MGQKVHPLGFRLGVTQKHRSQWFAKPQEYSQLVLEDHFLREELNKRFPNSGIIDLFIQRK 60 Query: 61 AK--SIRVTIHTARPGIVIGKKGEDVEKLRKV----------------VADIAGVPAQIN 102 + V I T RPG+++G+K ++ +KL+++ V+ A V Q+ Sbjct: 61 VDRTQVEVEIRTTRPGLLVGRKRQNCDKLKQLRDELQVELNKFRAKNGVSPTAKVALQVT 120 Query: 103 IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEI 162 + + E A ++A+ + +QLERR+ FRRA++R + R +G K++VSGRL GAEI Sbjct: 121 TVQNKSSE--AIVIAEFLVNQLERRIAFRRALRRVLSIIQRDRVQGAKIQVSGRLNGAEI 178 Query: 163 ARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQP 217 AR+EW R GRVPL TLRAD+DY EA T YG++G+KVW FKGEI AVE P Sbjct: 179 ARSEWIRTGRVPLQTLRADVDYCHREAKTIYGILGIKVWTFKGEIKPVRKAVEVP 233 >UniRef50_P41205 30S ribosomal protein S3 n=2 Tax=Mycoplasma RepID=RS3_MYCPN Length = 273 Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 145/240 (60%), Gaps = 10/240 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTK-EFADNLDSDFKVRQYLTKELAKASVSRIVIER 59 MGQKV+ NG+R GI K W S W AN+ + A L D K+R A VS + IER Sbjct: 1 MGQKVNSNGLRFGINKNWISRWTANSHAQTAKWLIEDEKIRNLFFVNYRNAQVSNVEIER 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN--IAEVRKPELDAKLVA 117 ++ V ++ A+P +IG + ++++K+ K + I G ++ I E+ P L A+++A Sbjct: 61 TQATVDVFVYAAQPAFLIGSENKNIQKITKQIKQIIGRTTNLDLTINEIGSPMLSARIIA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 + + +E RV R AM++++ ++ GA GIKV VSGRL GAEIAR + Y EG +PL T Sbjct: 121 RDLANAIEARVPLRTAMRQSLIKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLST 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEILG-GM----AAVEQPEKPAAQPKKQQRKGR 232 LRADIDY +A TTYGVIGVKVWI +G I G+ A + P+K QP +Q ++ R Sbjct: 181 LRADIDYALEKAQTTYGVIGVKVWINRGMIYTKGLNRTPAHILHPQKK--QPNRQNQQPR 238 >UniRef50_Q8M9V0 30S ribosomal protein S3, chloroplastic n=1 Tax=Chaetosphaeridium globosum RepID=RR3_CHAGL Length = 255 Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 102/252 (40%), Positives = 144/252 (57%), Gaps = 46/252 (18%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK----------- 49 MGQKV+P G RLG+ + +S WFA K+FA L+ D K+R Y+ + + K Sbjct: 1 MGQKVNPLGFRLGVTQEHHSYWFATNKQFAGFLEEDQKIRHYIYQYVQKHIRESSNTSYG 60 Query: 50 -ASVSRIVIERPAKSIRVTIHTA-RPGIVIG----------------------------- 78 + VS+I I+R + I V IHT+ P ++I Sbjct: 61 YSGVSKIEIKRDTELIHVEIHTSGFPALLIKGQIKEKNRDKNKSNKNSALDQSVNKNQNK 120 Query: 79 KKGEDVEKLRKVVA---DIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMK 135 G+++EK+ + V ++ ++ +++V P +A +VA+ I QLE RV FRRAMK Sbjct: 121 NTGQELEKMWRYVQRSLTLSNGKFRMTLSKVSNPYKEANIVAEYIARQLENRVAFRRAMK 180 Query: 136 RAVQNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 +A+++A G KGIK+++SGRL GAEIAR EW REGRVPL TLRA IDY A T YG Sbjct: 181 QAIKDAKENGQVKGIKIQISGRLNGAEIARVEWAREGRVPLQTLRAKIDYCHYPAQTKYG 240 Query: 195 VIGVKVWIFKGE 206 V+G+KVWIF+GE Sbjct: 241 VLGIKVWIFQGE 252 >UniRef50_D1J746 30S ribosomal protein S3, chloroplastic n=2 Tax=Phaeophyceae RepID=D1J746_ECTSI Length = 222 Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 134/217 (61%), Gaps = 9/217 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQY-----LTKELAKASVSRI 55 MG K HP G RLGIV+ S W++ + + L D+++R+Y L ++ + ++++ Sbjct: 1 MGHKTHPLGFRLGIVQEDKSLWYSGSNSYVSFLKEDYQIREYIYQFLLLNKVGYSGITKL 60 Query: 56 VIER--PAKSIRVTIHTARPGIVIGKKGEDVEKL-RKVVADIAGVPAQINIAEVRKPELD 112 +I+R K I + I + PG ++GK G + KL ++ + INI E+ KP + Sbjct: 61 IIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRKLDEELSVLLKNKKVLINIVEITKPYTE 120 Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNA-MRLGAKGIKVEVSGRLGGAEIARTEWYREG 171 A ++ D + +LE RV FR ++ ++ KGIK++++GRL GAEIARTEW REG Sbjct: 121 ATILVDLLVKKLEERVSFRMCIREILKRYRTEDELKGIKIQIAGRLNGAEIARTEWVREG 180 Query: 172 RVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 RVPL TLRA+IDY+ A TTYG++G+K+W+FK EIL Sbjct: 181 RVPLQTLRANIDYSYKTAQTTYGILGIKIWLFKNEIL 217 >UniRef50_Q32RN6 30S ribosomal protein S3, chloroplastic n=32 Tax=Streptophyta RepID=RR3_ZYGCR Length = 236 Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 92/229 (40%), Positives = 142/229 (62%), Gaps = 21/229 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVR----QYLTKELAKAS----V 52 MGQK+HP G RLG+ + +STWFA +++ L D ++R QY+ K + +S + Sbjct: 1 MGQKIHPLGFRLGVTQNHHSTWFAPLNNYSELLKEDERIRNCIQQYVRKYVRSSSRSAEI 60 Query: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGED---------VEKLRKVVADI---AGVPAQ 100 +R+ I++ + V IHTA P +++ + + +E LR+ + + Sbjct: 61 ARVQIQKKTDLVEVQIHTASPSLLVQTRVPNRSTNTQEIGIEYLRRNIQNTLNPGNRKLN 120 Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG-AKGIKVEVSGRLGG 159 + +++V KP +A ++A+ I QLE RV FR+ MK+A++ A + G A+GIK++++GRL G Sbjct: 121 MTLSQVAKPYGEAIILAEYIALQLESRVAFRKTMKQAIKLANKSGNARGIKIQIAGRLNG 180 Query: 160 AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 AEIAR EW REGRVPLHTLRA IDY A T YGV+G+KVW+F+ + L Sbjct: 181 AEIARVEWAREGRVPLHTLRAQIDYCHYPAQTIYGVLGIKVWVFQNKSL 229 >UniRef50_Q601K8 30S ribosomal protein S3 n=6 Tax=Mycoplasma RepID=RS3_MYCH2 Length = 227 Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 135/212 (63%), Gaps = 6/212 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+PNG R GI + N+ W+A+ +F+ NL D K+ ++ K + + VI R Sbjct: 1 MGQKVNPNGFRFGITRNHNAIWYADKNKFSINLLEDVKIHRFFEKLTREYQIGNTVIRRD 60 Query: 61 -AKSIRVTIHTARPGIVIGKKGED----VEKLRKVVADIAGVPAQINIAEVRKPELDAKL 115 +I V ++TA+ G +G GE+ VEKLRK + + + ++ +++ PEL+AKL Sbjct: 61 RNNAITVLVYTAKLGSFLGASGENLKKIVEKLRKTLKN-RKIVINVDAVDIQSPELNAKL 119 Query: 116 VADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPL 175 +A+ I +LE+R +R A K A++ A++ GA G+K V GRL G E+AR E Y EG + L Sbjct: 120 MAELIAEKLEQRKSYRIAQKFAIRTALKNGATGVKTIVCGRLNGVEMARCEGYAEGEMKL 179 Query: 176 HTLRADIDYNTSEAHTTYGVIGVKVWIFKGEI 207 HTLR +++Y T+ A TTYG++GVKVW+ GEI Sbjct: 180 HTLRQNVEYATAIAKTTYGILGVKVWVSLGEI 211 >UniRef50_UPI0001B44297 30S ribosomal protein S3 n=1 Tax=Listeria monocytogenes FSL F2-515 RepID=UPI0001B44297 Length = 194 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 77/147 (52%), Positives = 107/147 (72%), Gaps = 1/147 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G+R+G+++ W+S W+A K++AD L D ++R Y+ K L+ ASVSR+ IER Sbjct: 1 MGQKVHPIGMRIGVIRDWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERA 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 A + +TIHTA+PG+VIGK G +VE LRK + ++ INI E+++ +LDAKLVA++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTKKRVHINIVEIKRADLDAKLVAENI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAK 147 QLE RV FRRA K+A+Q MR G K Sbjct: 120 ARQLEGRVSFRRAQKQAIQRTMRAGQK 146 >UniRef50_D0EVS4 30S ribosomal protein S3, chloroplastic n=1 Tax=Bryopsis hypnoides RepID=D0EVS4_9CHLO Length = 243 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 35/237 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G RLG + + WFA + + + D +R + + A + +I I R Sbjct: 1 MGQKIHPYGFRLGNFQKHQANWFAKKENYTQKIFEDLFIRDFFFQRFRDAGILKISINRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQ------------------- 100 + I++ I +PG I K + ++K + + A + Q Sbjct: 61 FNNHIQICIFLTKPGFFISSKNAQLTTIQKTL-ETAFLKYQSSNFFRLNFLKQSSLSKNN 119 Query: 101 --------------INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGA 146 I + E+ K E A +AD + QLE+R+ FRRA+K+ ++ + R Sbjct: 120 IKSILEHQNTPKLTIQLMELVKIEQKAAFLADFLIEQLEKRIAFRRAVKKTLKRSERSKI 179 Query: 147 KGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 +GIK+++SGRL GAEIARTEW REGRVPL TLRA+IDY A T YG++GVKVW+F Sbjct: 180 QGIKIQISGRLNGAEIARTEWIREGRVPLQTLRANIDYTYKTAKTIYGILGVKVWVF 236 >UniRef50_P56798 30S ribosomal protein S3, chloroplastic n=103 Tax=Streptophyta RepID=RR3_ARATH Length = 218 Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 134/217 (61%), Gaps = 11/217 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVR----QYLTKELAKAS----V 52 MGQK++P G RLG + +S WFA K++++ L+ D K+R Y+ K + +S + Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLR-KVVADIAGVPAQINIAEVR--KP 109 +RI I++ I++ I+ P ++I K VE+L+ V ++ V ++NIA R P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120 Query: 110 ELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYR 169 D ++A+ I QL+ RV FR+AMK+A++ + KGI+V+++GR+ G EIAR EW R Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 EGRVPL T+ A IDY + T YGV+G+K+WIF E Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDE 217 >UniRef50_P56365 30S ribosomal protein S3, chloroplastic n=3 Tax=Chlorophyta RepID=RR3_CHLVU Length = 231 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/230 (37%), Positives = 140/230 (60%), Gaps = 16/230 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER- 59 MGQKVHP G RLGI + S W ++ A + +R ++ K+ A ++ I I+R Sbjct: 1 MGQKVHPIGFRLGITQKHRSYWCTTPQKSALWIQDASFLRNFIKKKYIGAGITHIEIQRQ 60 Query: 60 --PAKSIRVTIHTARPGIVIGKKGEDVEKL-------------RKVVADIAGVPAQINIA 104 + S+ + I+ AR + G + +E+L ++ + + + ++++ Sbjct: 61 DVDSPSLGIQIYAARLRQIAGNDSKGLERLQEELVKQLQIFYRKRNLVEPGTIHLRLSVK 120 Query: 105 EVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 164 +R PE A+++A+ + +LE+R FRRAM++ VQ A+R G KGIKV++SGRL GA+IAR Sbjct: 121 PLRAPEAYAEVLAEKLVEELEQRKPFRRAMRQTVQRALRAGVKGIKVQISGRLNGADIAR 180 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAV 214 +E REG VPL TLRADIDY++ A T +G++G+K+W+F+GE L ++ V Sbjct: 181 SEDVREGPVPLQTLRADIDYSSKPAKTIFGLLGIKIWVFRGERLTRISNV 230 >UniRef50_P0C485 30S ribosomal protein S3, chloroplastic n=72 Tax=Spermatophyta RepID=RR3_ORYSJ Length = 239 Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 34/239 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQ----YLTKELAKAS----- 51 MGQK++P G RLG + +S WFA K +++ L D K+R Y+ K K S Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRK 89 ++ I I++ +I V IH P + + KKG E + Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNL-LKKKGAIEELEKD 119 Query: 90 VVADIAGVPAQINIA--EVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK 147 + ++ V ++NI +V++P ++A+ I QL+ RV FR+AMK+A++ + K Sbjct: 120 LQKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIK 179 Query: 148 GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 G+KV+++GRL G EIAR E ++GR+PL T+RA IDY T YGV+GVK+WIF E Sbjct: 180 GVKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDE 238 >UniRef50_P58133 Plastid 30S ribosomal protein S3 n=1 Tax=Euglena longa RepID=RR3_ASTLO Length = 219 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 116/218 (53%), Gaps = 17/218 (7%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK +PNG+R G K S W+ K ++ + D +R++L +++ +S I IE+ Sbjct: 1 MGQKTNPNGLRFGKFKKHFSCWYTENKNYSHFVKQDIFIRKFLMEKIKNVFISLIEIEKD 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEK-----------LRKVVADIAGVPAQIN-----IA 104 K + IH K + EK L K + V N + Sbjct: 61 NKETVIFIHYLNFS-KFNKVETNSEKNEINLFKLKNLLLKSLNSFFNVKINFNEFIIKLI 119 Query: 105 EVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 164 E+ P LD + +A+ I +LE+R+ FR+ + + N + G KGIK+++SGRL AE+AR Sbjct: 120 EIENPILDVRFIANDIRYKLEKRMNFRKIVNSTIANIINKGIKGIKIKLSGRLNDAEMAR 179 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 E +REG+VPL+TL+A+IDY A T G +G+KVW+ Sbjct: 180 EESFREGKVPLNTLKANIDYFHCTAKTLSGSLGIKVWL 217 >UniRef50_A6YGC6 30S ribosomal protein S3, chloroplastic n=1 Tax=Leptosira terrestris RepID=A6YGC6_LEPTE Length = 325 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 86/300 (28%), Positives = 131/300 (43%), Gaps = 95/300 (31%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G R+GI K S WF+N+K++ ++ D+ +R + K A +S I I+R Sbjct: 1 MGQKVHPLGFRVGITKKHRSLWFSNSKQYPQSVLEDYVIRNNILKTFPSAEISEIHIQRT 60 Query: 61 AKSIR-------VTIHTARPGIVIGKKGEDVEKLRKVVA--------------------- 92 I + I++ +P ++G K E + KLRK++ Sbjct: 61 HHDIESSPNGLIIIIYSKKPNQLVGNKHEKLHKLRKILKQKLTLNRSLIKPKGQVFLNSS 120 Query: 93 --DIAGVPAQ--------INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAV---- 138 D + + Q + E+ P A + ++I QL+ R +R +K+ + Sbjct: 121 WRDFSKILLQKQKTDRIKFLVREITTPYSSAFCIGNAIVQQLQDRQRYRFVIKKVIAEVK 180 Query: 139 ------------------------------------QNAMRLGAKGI----------KVE 152 QN + +V Sbjct: 181 KERKENLKTIQPTNTNKVITSREIPTMEFPAALEKAQNPLEYNLSAFNQSKQDKSSYQVP 240 Query: 153 VSG---RLGG----AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 + G +L G AEIARTEW+R+GRVPLHTL+ADIDY+ +A+T YG+IGVKVW+F G Sbjct: 241 IKGLKIQLAGRLNGAEIARTEWFRKGRVPLHTLKADIDYSYQKAYTKYGIIGVKVWVFNG 300 >UniRef50_B7T3V4 30S ribosomal protein S3, chloroplastic n=1 Tax=Monsonia speciosa RepID=B7T3V4_9ROSI Length = 266 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 55/258 (21%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL-------AKASVS 53 MGQK++P G RLG + +S WF K + ++L D K+R + + K ++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSVWFEKPKNYCESLKEDKKIRDRIKNYIDNRRSGPMKDLIT 60 Query: 54 RIVIERPAKSIRVTIHTARPGIVIGKK------------------GE--DVEKLR----- 88 RI IE+ I+V I+ + +G K GE +++LR Sbjct: 61 RIQIEKGMDLIKVIIYMGFQELFMGDKPAKTKKGKRKRGQKGKKEGEPRHIKELRVRELK 120 Query: 89 -----------------------KVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE 125 K ++ ++ I + P D ++A+ + QL+ Sbjct: 121 VNVAKALHLNLSGNRGLKKLNVEKGLSQSGNRQLKVVIRNISNPYGDPNILAEFLADQLK 180 Query: 126 RRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYN 185 R+ FR+AMKR ++ A KG+KV+++GRLGG +IAR E +GRVPLHT+RA ID+ Sbjct: 181 NRISFRKAMKRVIELAKEANTKGVKVQIAGRLGGRDIARVECLLQGRVPLHTIRAKIDFC 240 Query: 186 TSEAHTTYGVIGVKVWIF 203 ++ YGV+G+K+WIF Sbjct: 241 STRVQMLYGVLGIKIWIF 258 >UniRef50_B2X260 30S ribosomal protein S3, chloroplastic n=1 Tax=Floydiella terrestris RepID=B2X260_9CHLO Length = 611 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 97/160 (60%), Gaps = 7/160 (4%) Query: 52 VSRIVIERPAKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPA-----QINIAE 105 +SR + +R K+ I +++ + KK D E + IA + I Sbjct: 446 ISRAIQKRMKKNLILMSLRNRFDKVANFKKVYDTENFTTLCEKIAKIQTFPKITSIEFVS 505 Query: 106 VRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL-GAKGIKVEVSGRLGGAEIAR 164 V+ P L A +A+ I +L++R FR +MK+A ++AM+ G KGIK++++GRL GAEIAR Sbjct: 506 VKTPTLYAVCLANFIVEKLQKRFSFRGSMKKAKEDAMKTPGIKGIKIQIAGRLNGAEIAR 565 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 TEW R GRVPL TL+A IDY+ A T YG++GVKVW+FK Sbjct: 566 TEWMRAGRVPLQTLKAKIDYSYKTASTIYGILGVKVWLFK 605 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 13/87 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL------------A 48 MGQK+HP G R+GI + + WFA+ ++ + DF +R+ L K L Sbjct: 1 MGQKIHPFGFRVGITQKHYARWFASPDKYPQYVLEDFLIRKSLYKLLPPENLPKKMEDSG 60 Query: 49 KASVSRIVIERPAK-SIRVTIHTARPG 74 K V I IER + +I++ I+ PG Sbjct: 61 KMRVVHIKIERFLRNTIQIKIYAVNPG 87 >UniRef50_Q06J59 30S ribosomal protein S3, chloroplastic n=1 Tax=Bigelowiella natans RepID=RR3_BIGNA Length = 246 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 39/245 (15%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKE-------------L 47 MGQKVHP G R+G+ + S WF K+++ L D+ +R+ + L Sbjct: 1 MGQKVHPLGFRVGLNGNYKSKWFVKPKDYSLLLFQDYLIRKNIFNYFNILNNSKNKKNLL 60 Query: 48 AKASVSRIVIERPAKSIRVTIHTARPG-IVIGKKGEDVEKL-----RKVVADIAGVPAQ- 100 +++ I I R + + I+ A ++ G + + L K+V + V + Sbjct: 61 DSINITDIKINRKFDQVYIDIYVASMNKVIFNTSGSNSDPLIKIQSNKIVDQLQRVLLKQ 120 Query: 101 ------------------INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 +NI E +A +A + LE RV FRRA+K + Sbjct: 121 VSSFNLGNKKVNNSSKIIVNIIESPDINTNAVFIAKCLIDDLENRVPFRRALKTILDTTQ 180 Query: 143 RL-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW 201 + G+K+++SGRL G E+AR+EW REGR+PL TL A+I Y A T YG++GVKVW Sbjct: 181 KQKNLAGVKIQISGRLNGIEMARSEWVREGRIPLQTLTANIGYYNDVAETKYGLLGVKVW 240 Query: 202 IFKGE 206 ++K + Sbjct: 241 VYKNK 245 >UniRef50_D0VMX7 Ribosomal protein S3 n=1 Tax=Volvox carteri f. nagariensis RepID=D0VMX7_VOLCA Length = 742 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/128 (51%), Positives = 88/128 (68%), Gaps = 5/128 (3%) Query: 83 DVEKLRKVV-ADIAGVPA-QINIAEVRKPEL--DAKLVADSITSQLERRVMFRRAMKRAV 138 +E RK+ A++A +P I V+ ++ A +VADSI LE+R FR +K+A Sbjct: 610 QIENQRKMYKANLALIPKISIKFFSVKTTDILEKASIVADSIVDALEKRKAFRGVIKKAK 669 Query: 139 QNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 197 ++ MR KG+K++VSGRL GAEIAR+EW R GRVPL TLRA+IDY+ A+T YG+IG Sbjct: 670 EDLMRRRRVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANIDYSYRTANTIYGIIG 729 Query: 198 VKVWIFKG 205 VKVWIFKG Sbjct: 730 VKVWIFKG 737 >UniRef50_B2X1Z6 30S ribosomal protein S3, chloroplastic n=1 Tax=Oedogonium cardiacum RepID=B2X1Z6_OEDCA Length = 596 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/105 (56%), Positives = 77/105 (73%), Gaps = 1/105 (0%) Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGA-KGIKVEVSGRLGG 159 I I EV++P A +A IT +LE+R FR MK+A + A++ + KGIK+++SGRL G Sbjct: 487 IEIIEVKQPSEYAVCLAYFITQKLEKRFSFRSIMKQAKRVAIQTSSVKGIKIQLSGRLNG 546 Query: 160 AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 AEIARTEW REGRVPL TL AD+DY+ A T YG+IGVKVW+F+ Sbjct: 547 AEIARTEWIREGRVPLQTLEADVDYSYKTAQTLYGIIGVKVWVFR 591 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 13/88 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIV---- 56 MGQK+HP G R+GI K + WFAN+ ++ + D +R+ LT +A S+ R+ Sbjct: 1 MGQKIHPLGFRVGITKKHKAKWFANSDQYPQYILEDILLRKRLTSLIAPESLPRVFEDDK 60 Query: 57 --------IERPAK-SIRVTIHTARPGI 75 IER + +I++ ++ P + Sbjct: 61 KMRIVEVKIERFIQNTIKIQMYAVNPDL 88 >UniRef50_B7T425 30S ribosomal protein S3, chloroplastic n=4 Tax=Magnoliophyta RepID=B7T425_9ROSI Length = 243 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 125/237 (52%), Gaps = 37/237 (15%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK---------ELAKAS 51 M +K++P G RLG + +S WF K + L D ++R + E K Sbjct: 1 MARKINPLGFRLGTNQNHHSVWFEQPKNYCKGLQEDKRIRDCIKNFIDNRRKKSEPMKNL 60 Query: 52 VSRIVIERPAKSIRVTIHTARPGIVIG----------KKGEDVEKLR--------KVVAD 93 ++RI IE KSI+ IH I +G K+G+ ++LR KV + Sbjct: 61 ITRIQIE---KSIKKQIHLTTVIIFMGFQELFEEKPKKRGKKEDELRHIKEFSELKVNVE 117 Query: 94 IAGVP-------AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGA 146 A P ++ I+++ P D ++A+ + L+ R+ FR+AM+R ++ + + Sbjct: 118 KALDPNLRRNRELKVVISKIFNPFGDPNILAELLAHLLKTRIPFRKAMRRVIELSKKADI 177 Query: 147 KGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 KG+KV+++GR+ G +IAR E +GRVPLHT+RA ID+ ++ +GV+G+K+WIF Sbjct: 178 KGVKVQIAGRIDGRDIARVECLLQGRVPLHTIRAKIDFCSTRVQMRFGVLGIKIWIF 234 >UniRef50_B2Y1Z8 30S ribosomal protein S3, chloroplastic n=1 Tax=Welwitschia mirabilis RepID=B2Y1Z8_WELMI Length = 214 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 117/214 (54%), Gaps = 9/214 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS------VSR 54 MG KV+P G RLGI + +S WF + + D K+ + + + ++R Sbjct: 1 MGHKVNPLGFRLGITQKNHSVWFVKKRLYPKIFQEDVKIHKSIENYFQRHQQNSYLGIAR 60 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAE--VRKPELD 112 I IER I V I T + +KG+ + L+ + G ++N+ ++KP + Sbjct: 61 IEIERKVDLINVIIFTGFSSFLNKEKGK-ISSLKNEIRQNLGTKKKLNVKTEILKKPYQN 119 Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGR 172 AK++ + I SQLE+RV ++ +++AV+ A + +GI++ ++GRLGG E R + GR Sbjct: 120 AKILVEFIASQLEKRVAVKKILQKAVELAQKEDIEGIRIRIAGRLGGRERTRKTKKKIGR 179 Query: 173 VPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 V L TLRA+++Y + T +G +G+++WIF E Sbjct: 180 VTLQTLRAEMNYCSYTVRTIHGTLGIQLWIFMKE 213 >UniRef50_Q06SI4 30S ribosomal protein S3, chloroplastic n=112 Tax=cellular organisms RepID=RR3_STIHE Length = 1126 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%) Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG-AKGIKVEVSGRLGG 159 I + +V +P+ A +A+ + LE+R FR MKRA + AM KGIK+++SGRL G Sbjct: 1014 IELVKVHQPKQYAVCLANFVVENLEKRFSFRSTMKRASEQAMSTANVKGIKIQISGRLNG 1073 Query: 160 AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 AEIARTEW R+G VPL TLRA+IDY+ A T YG++GVKVW+FK Sbjct: 1074 AEIARTEWLRDGVVPLQTLRANIDYSYKTAKTIYGILGVKVWLFK 1118 Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 42/72 (58%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G R+GI +P ++ WFANT ++ + DF +RQ L K L ++ R E Sbjct: 1 MGQKIHPYGYRVGITQPHSARWFANTYQYPQYVFEDFLLRQSLFKNLPVENLPRKRTEDK 60 Query: 61 AKSIRVTIHTAR 72 +++ V I R Sbjct: 61 SETKLVQIKIER 72 >UniRef50_P46307 30S ribosomal protein S3, chloroplastic n=3 Tax=Chlorophyta RepID=RR3_CHLMO Length = 800 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/131 (48%), Positives = 89/131 (67%), Gaps = 5/131 (3%) Query: 80 KGEDVEKLRKV-VADIAGVPA-QINIAEVRKPELD--AKLVADSITSQLERRVMFRRAMK 135 K E++E+ + + V ++ VP I V + L+ A +V++S+ LE+R FR+ +K Sbjct: 659 KFEELERRKTMWVQNLQLVPKISIKFFSVNQKALNLKASIVSESVVDALEKRKAFRKVIK 718 Query: 136 RAVQNAMRLGA-KGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 +N MR KG+K++V+GRL GAEIARTEW R GRVPL TLRA++DY+ A+T YG Sbjct: 719 TTKENLMRNSEIKGVKIQVAGRLNGAEIARTEWVRAGRVPLQTLRANLDYSYRTANTIYG 778 Query: 195 VIGVKVWIFKG 205 +IGVKVWIFKG Sbjct: 779 IIGVKVWIFKG 789 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFA--NTKEFADNLDSDFKVRQYLTK 45 MGQKVHP+G R+GI K S WFA N +++ + D +R L K Sbjct: 1 MGQKVHPSGFRVGITKKHQSQWFARFNKNKYSQTVLEDRMIRDTLNK 47 >UniRef50_Q2WGE8 30S ribosomal protein S3, chloroplastic (Fragment) n=2 Tax=Selaginella RepID=Q2WGE8_SELUN Length = 225 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 105/223 (47%), Gaps = 19/223 (8%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL------------- 47 G+K +P G RLGI K + W A + ++ + D +VR + Sbjct: 1 TGRKTNPLGSRLGIAKNHHPNWSARPRIYSQYVQEDKQVRDCTDAYVHGQRVWNPAGSGG 60 Query: 48 --AKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLR----KVVADIAGVPAQI 101 + R+VI R V H P ++I G +E+ R + ++D I Sbjct: 61 NSGAEGIERVVIRRKTDLPSVETHAGPPAVLIRSHGRGIEQSRMNVQQNLSDSRIGRVHI 120 Query: 102 NIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAE 161 AE P + A + SQ RV FRR K+A++ A + G KGIK +++GR GAE Sbjct: 121 ASAETSGPYGEPNTPAKYMASQPGNRVAFRRTTKKAIEPARKSGRKGIKTQIAGRPNGAE 180 Query: 162 IARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 IAR EW REGRVP T RA IDY A T YGV G KV I + Sbjct: 181 IARVEWAREGRVPPQTSRAQIDYRYYPAQTVYGVSGTKVRILR 223 >UniRef50_Q08365 30S ribosomal protein S3, chloroplastic n=2 Tax=cellular organisms RepID=RR3_CHLRE Length = 712 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/130 (50%), Positives = 83/130 (63%), Gaps = 8/130 (6%) Query: 84 VEKLRKVV-ADIAGVPA-QINIAEVRKPEL--DAKLVADSITSQLERRVMFRRAMKRAVQ 139 +E RK+ A++A P I V+ L A VADSI LE+R FR +K+A + Sbjct: 579 IESQRKMYKANLALTPKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAKE 638 Query: 140 NAMRLG----AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGV 195 + M KG+K++V+GRL GAEIAR+EW R GRVPL TLRA+IDY A+T YG+ Sbjct: 639 DLMLRSRVTRVKGVKIQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYGI 698 Query: 196 IGVKVWIFKG 205 IGVKVWIFKG Sbjct: 699 IGVKVWIFKG 708 Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust. Identities = 17/30 (56%), Positives = 21/30 (70%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFA 30 MGQKVHP G R+GI K S WFA +++A Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYA 30 >UniRef50_Q1KVX7 30S ribosomal protein S3, chloroplastic n=3 Tax=cellular organisms RepID=RR3_SCEOB Length = 700 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 57/94 (60%), Positives = 69/94 (73%), Gaps = 1/94 (1%) Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAMRL-GAKGIKVEVSGRLGGAEIARTEWYREG 171 A VADSI LE+R FR +K+A ++ MR KG+K++VSGRL GAEIAR+EW R G Sbjct: 588 ASAVADSIVDDLEKRKAFRGVIKKAKEDLMRTPKVKGVKIQVSGRLNGAEIARSEWVRAG 647 Query: 172 RVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 RVPL TLRA+IDY A T YG+IGVKVWI+KG Sbjct: 648 RVPLQTLRANIDYCYKTAQTIYGIIGVKVWIYKG 681 Score = 39.7 bits (91), Expect = 0.084, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFA--NTKEFADNLDSDFKVRQYLTKELAK 49 MGQK+HP G R+GI K S WFA + ++A ++ D +R+ L K L + Sbjct: 1 MGQKIHPLGFRVGITKKHQSVWFARFHKHQYAQSVLEDRFLRKNLLKLLPQ 51 >UniRef50_D0FY21 30S ribosomal protein S3, chloroplastic n=1 Tax=Dunaliella salina RepID=D0FY21_DUNSA Length = 706 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 65/138 (47%), Positives = 89/138 (64%), Gaps = 14/138 (10%) Query: 82 EDVEKLRKVVADIAGVPAQINIA--EVRKPELDAK--LVADSITSQLERRVMFRRAMKRA 137 E +EK R + D + +I I V++ + AK +VADS+ LE+R FR+ +K+A Sbjct: 564 EQIEKQRNMYIDNVQLTPKIAIKFYSVKEKSVKAKASIVADSVVDALEQRSSFRKIIKKA 623 Query: 138 VQNAMRLG----------AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTS 187 ++ MR KG+K++VSGRL GAEIAR+EW R GRVPL TLRA++DY+ Sbjct: 624 KEDLMRSPISSSDGKINRVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANLDYSYK 683 Query: 188 EAHTTYGVIGVKVWIFKG 205 A+T YG+IGVKVWIFKG Sbjct: 684 TANTIYGIIGVKVWIFKG 701 Score = 42.4 bits (98), Expect = 0.014, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFA--NTKEFADNLDSDFKVRQYLTK 45 MGQKVHP G+R+GI K S WFA + ++A ++ D +RQ LT+ Sbjct: 1 MGQKVHPLGLRVGITKKHQSQWFARFHKNKYAQSVLEDRMLRQTLTQ 47 >UniRef50_B7ZIJ3 30S ribosomal protein S3, chloroplastic n=1 Tax=Ephedra equisetina RepID=B7ZIJ3_EPHEU Length = 215 Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 16/218 (7%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQ----YLTKELAKA--SVSR 54 MG KV+P G RLG+ + NS WFA +E+ L D K+ + + + K+ + R Sbjct: 1 MGHKVNPMGFRLGLTQNHNSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGR 60 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV------PAQINIAEVRK 108 I I+R I + I+ P +K E + +V DI IN + K Sbjct: 61 IEIQRKIDLINIIIYIGFPIFFKNEKNE----ITRVKNDIKRTLYLRDQKLNINAEILAK 116 Query: 109 PELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWY 168 P ++A+ I QLE+RV ++ +++AV+ A + +GI++ ++GRLGG E R Sbjct: 117 PYQKTNILAEYIALQLEKRVAVKKILQKAVELAKKDEIEGIRIRIAGRLGGRERTRKTKI 176 Query: 169 REGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 + GRV L TLRA++DY++ T +G +G+++WIF E Sbjct: 177 KLGRVTLQTLRAEMDYSSFTVRTIHGALGIQLWIFMKE 214 >UniRef50_Q1RU61 Bacterial ribosomal protein S3 n=1 Tax=Medicago truncatula RepID=Q1RU61_MEDTR Length = 158 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 28/179 (15%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS----VSRIV 56 MGQK+HP G RLG +S WFA K +++NL D +R + + K S + RI Sbjct: 1 MGQKIHPFGFRLGTTPNHDSIWFAQPKNYSENLKEDKIIRDCIKNYIQKTSGVEGIGRIK 60 Query: 57 IERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPEL--DAK 114 I++ I+ + ++ V +INI R P D Sbjct: 61 IKKRINLIQTNVQ----------------------KNLNCVTRKINITITRIPNTYSDPN 98 Query: 115 LVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 ++A+ I QL+ R+ FR+A+K+A++ A + KG++V+++GR+ G EIA EW REG V Sbjct: 99 ILAEFIAGQLKNRISFRKAIKKAIELAEQTCTKGVQVQIAGRIDGKEIACVEWIREGDV 157 >UniRef50_Q05FJ0 30S ribosomal protein S3 n=2 Tax=Candidatus Carsonella ruddii RepID=RS3_CARRP Length = 203 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 14/208 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRI-VIER 59 MG+K++P RL ++S W+ K F L D +R+ + + ++S I +I Sbjct: 1 MGKKINPILFRLKKNTVYHSLWYTFKKNFCYYLKCDILIREIIRRNFLFINLSYIDIIIS 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVAD 118 +I + I+ +I L V I+ + + + V L+AK +A Sbjct: 61 NKLTINLYINNVDQFNIIE------NYLDVFVFQISKILKKNVILNFVFNHVLNAKNIAY 114 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAK--GIKVEVSGRLGGAEIARTEWYREGRVPLH 176 ++ +Q ++ + ++K+ ++ + K G K+++SGRL G +IAR EW GR+PLH Sbjct: 115 NVVNQ----ILNKNSIKKIIKEELLKNRKNFGCKIQISGRLEGVDIARKEWSLIGRIPLH 170 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFK 204 T++ +++Y E T YG++GVK+W+FK Sbjct: 171 TIKYNLEYYQCETLTQYGILGVKIWLFK 198 >UniRef50_C6UN14 Putative 30S ribosomal subunit protein S3 n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN14_HODCD Length = 226 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 13/228 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K +P G+RL + W FA +++A+ + + KV+ YL + I++ Sbjct: 1 MGNKTNPIGVRLVVRGHWEDAVFARGRDYAEAVYLNHKVKAYLATRYRACGMISSAIKQE 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + V I+T G+ +++ + A +++ + +A + Sbjct: 61 GNAYVVVINTDDVDAFFASAGQSADEMADALKLWFWPDASLSVRRLDDAASHPVNIAFKL 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 + + ++K+ + + GIK +GR+ G +IA+T W+ EGR+PLHTL A Sbjct: 121 MDDVATNSTVKASVKQMAKALVGTSVAGIKASYAGRIYGGDIAQTVWHIEGRIPLHTLAA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQ 228 D+ Y + T YGV VKVW+ + P+AQP + Q Sbjct: 181 DVRYASVSTKTNYGVCNVKVWVCAND-------------PSAQPLEAQ 215 >UniRef50_A4FWB6 30S ribosomal protein S3P n=11 Tax=Methanococcales RepID=RS3_METM5 Length = 211 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 4/176 (2%) Query: 35 SDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA-D 93 S+ + +Y +L +A S I +++ R+T+ +PG VIG+KG+ V++L + +A + Sbjct: 12 SETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLAKE 71 Query: 94 IAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEV 153 A QI + +V P+LD +V I S LER + FRR A++ M GAKG+ + V Sbjct: 72 YAVKNPQIEVKQVENPDLDPAIVGHKIASSLERGMHFRRTAHSAIRRVMGSGAKGVSIIV 131 Query: 154 SGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSE--AHTTYGVIGVKVWIFKGEI 207 SG+L G E +RTE + +G + A+ N S A GV+GV V I K ++ Sbjct: 132 SGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIMKPDV 186 >UniRef50_A7I5P5 30S ribosomal protein S3P n=2 Tax=Methanomicrobiales RepID=RS3_METB6 Length = 231 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 99/171 (57%), Gaps = 10/171 (5%) Query: 38 KVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV 97 +V +YLTKEL +A + I R +VTI +PGIVIGK G+ V +L + +A GV Sbjct: 16 RVEKYLTKELKRAGFGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVHQLTQDLAQNYGV 75 Query: 98 PA-QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 + QI + +V+ P +A+++A+ + + LER FR+A ++ M GA G +V ++G+ Sbjct: 76 ESPQIEVQQVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRVMDSGALGCEVVIAGK 135 Query: 157 LGGAEIARTEWYREGRV-----PLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 L GA ART+ + EG + P +T+ ++ + A GVIGV+V I Sbjct: 136 LTGAR-ARTQKFTEGYIKHCGEPSNTI---VEKGYAIAIKKLGVIGVQVKI 182 >UniRef50_Q9G889 Ribosomal protein S3 n=1 Tax=Malawimonas jakobiformis RepID=Q9G889_9EUKA Length = 215 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASV--SRIVIE 58 MGQ ++ G+ L K W S W+ N + +L D +R Y+ ++ + VI+ Sbjct: 1 MGQSINTTGLLLTHNKYWQSKWY-NDNNYIFSLYEDILIRNYIKNVFKNLNLFYGKCVIK 59 Query: 59 RPAKSIRVTIHTA---RPGIVIGK---KGEDVEKLRKVVADIAGVPAQINIAEVRKPE-- 110 R + I + I+ R I+ K K + +++++++ + + I + KP Sbjct: 60 RSIQKIYIYINIYKKKRKNIINTKDKRKLINKKEIKQILQSLTKLTNN-RIILIIKPTNI 118 Query: 111 LDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK--GIKVEVSGRLGGAEIARTEWY 168 DA+L+A I+ +LE R F K+ + + G +++ SGR G ++A +W+ Sbjct: 119 FDAQLLAQYISRKLEIRNSFLSIFKKILNKINKNKKIYKGFRIQCSGRPNGNDMAYIQWF 178 Query: 169 REGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 + G++PLHT IDY + A T YG+ GVKVW+ Sbjct: 179 KYGQIPLHTYNYKIDYAYTTALTKYGLSGVKVWL 212 >UniRef50_C5A280 30S ribosomal protein S3P n=8 Tax=Thermococcaceae RepID=RS3_THEGJ Length = 209 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 10/174 (5%) Query: 36 DFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA 95 + + +YL KEL +A I I++ +V I A PG VIG+ G + +L +++ Sbjct: 14 EMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIRELTRILERQF 73 Query: 96 GVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 G+ QI + E++ P L+AK+ A + LER + FRRA A++ MR GA+G+++ +S Sbjct: 74 GLENPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLS 133 Query: 155 GRLGGAEIARTEWYREGRV-----PLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 G+L G E A++ + +G + P TL + ++A GVIGVKV I Sbjct: 134 GKLTG-ERAKSVRFYQGYLAKVGNPAETL---VSKGYAQALLKLGVIGVKVAIM 183 >UniRef50_UPI0001855078 30S ribosomal protein S3 n=1 Tax=Helicobacter pylori HPKX_438_CA4C1 RepID=UPI0001855078 Length = 100 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 64/94 (68%) Query: 32 NLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVV 91 ++D D K+R++L KEL A VS IVIER AK +RVT+ ARPG++IGKKG D+EK+++ + Sbjct: 2 SIDEDNKIRKFLKKELYYAGVSEIVIERAAKKLRVTVVAARPGLIIGKKGVDIEKVKEGL 61 Query: 92 ADIAGVPAQINIAEVRKPELDAKLVADSITSQLE 125 + INI EV++P+ DA+L S L+ Sbjct: 62 KTLIKKEVSINIKEVKRPQADAQLALSFFLSPLK 95 >UniRef50_Q46GA1 30S ribosomal protein S3P n=8 Tax=Euryarchaeota RepID=RS3_METBF Length = 311 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 5/188 (2%) Query: 41 QYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL-RKVVADIAGVPA 99 +Y ++L +A + + R ++ I++ +PG+VIGK G+ + KL R V A Sbjct: 19 EYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIRKLTRDVAARYNLENP 78 Query: 100 QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGG 159 QI+ EV+KPEL+A+++A + + +ER FR+A ++ M GA G +V +SG+L G Sbjct: 79 QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTG 138 Query: 160 AEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWIFK-GEILGGMAAVEQ 216 A +R E + +G + D +D + A G +G KV I + G +L + Sbjct: 139 AR-SRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKVRIIQPGVVLPDSYTTTE 197 Query: 217 PEKPAAQP 224 P +P +P Sbjct: 198 PSEPVTEP 205 >UniRef50_A8AA20 30S ribosomal protein S3P n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=RS3_IGNH4 Length = 241 Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 2/148 (1%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K F + + KV +YL + S++ +++ RV I+ R G +IG++G+ +++ Sbjct: 10 KYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIKQ 69 Query: 87 LRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 + KV+ + G+P Q+ + +V +PELDA+++A + + L+R FRRA ++ M G Sbjct: 70 ITKVLEEWFGIPNPQVTVVKVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIMGAG 129 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRV 173 A G +V+VSG+L G E AR E Y G+V Sbjct: 130 AIGAQVKVSGKLRG-ERARFEKYIAGKV 156 >UniRef50_O28360 30S ribosomal protein S3P n=3 Tax=Euryarchaeota RepID=RS3_ARCFU Length = 229 Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 5/167 (2%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP 98 V++++ E+ A + I R +VT+ RPG+VIGK G ++ L + + D Sbjct: 17 VKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIKALTEKLKDFGIEN 76 Query: 99 AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLG 158 Q+++ EV KPE +A+L+A + LER FRRA R + M GAKG ++E+SG+L Sbjct: 77 PQVSVDEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIMEAGAKGCEIEISGKL- 135 Query: 159 GAEIARTEWYREGRVPLHT---LRADIDYNTSEAHTTYGVIGVKVWI 202 +E ARTE + G + +HT + + A GV+GV V I Sbjct: 136 VSERARTEKFVAGTI-VHTGDPAESMVQKGFDIAIKKLGVLGVSVRI 181 >UniRef50_Q9YF78 30S ribosomal protein S3P n=1 Tax=Aeropyrum pernix RepID=RS3_AERPE Length = 246 Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 4/170 (2%) Query: 38 KVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV 97 K+ ++L + +A SR+ + + + +TI RP ++IG++G + +L++V + G+ Sbjct: 18 KIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIGRRGATIRRLQEVFQTVFGL 77 Query: 98 P-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 P +I + + P LDA++ A I +ER + FRR A+ M GA G+++ +SG+ Sbjct: 78 PNPRIRVEQPENPMLDARVQAFRIARSIERGIHFRRVAFAAINRIMSNGALGVEITISGK 137 Query: 157 LGGAEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 L +E AR E ++ G+V H + +D ++ A GVIGV V I K Sbjct: 138 L-TSERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKGVIGVDVIIVK 186 >UniRef50_D2LQE8 Ribosomal protein S3 n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQE8_9EURY Length = 237 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 11/171 (6%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLR-KVVADIAGV 97 +++YL KE A A + I+R R+ + RPG+VIG+KG +++L K+ D Sbjct: 16 MKEYLMKETAMAGFGGLEIQRTPLGTRIILEVERPGMVIGRKGAKIKELTDKLQQDFGVE 75 Query: 98 PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRL 157 I + E P L+A+++A + LER FRRA ++ M GAKG ++ +SG+L Sbjct: 76 NPTIEVKESPNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIMEAGAKGAQIIISGKL 135 Query: 158 GGAEIARTEWYREGRV-----PLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 G + ARTE + +G + P+ +R + Y T A T G+IGV V I Sbjct: 136 TG-DRARTEKFMDGTIKYNGKPVELVR--MGYAT--AKTKPGIIGVTVKIM 181 >UniRef50_A6YEA6 Ribosomal protein S3 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEA6_CHLAT Length = 736 Score = 81.6 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 69/117 (58%), Gaps = 1/117 (0%) Query: 87 LRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG- 145 ++ ++++ I ++++P A+LVA I +LE+R FR+ ++ +++ R Sbjct: 617 IKSIISNGTLCHTSIRPVKIKEPFKSAELVAQDIAFKLEKRESFRKISRQIIKDIKRCKY 676 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 +GI++ +GR GAE+AR E R G+ LH IDY++ A+T YG+ GVKVWI Sbjct: 677 VEGIRITCAGRFNGAEMARVESRRFGQTSLHVFSKKIDYSSKTAYTPYGLFGVKVWI 733 >UniRef50_Q8W9Q9 Ribosomal protein S3 n=1 Tax=Mesostigma viride RepID=Q8W9Q9_MESVI Length = 210 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 25/217 (11%) Query: 1 MGQKVHPNGIRLGIVKPWN---STWFANTKEFADNLDSDFKVRQYLTKEL---AKASVSR 54 MGQK +P +R P+ S W+ + K ++ L DF +R Y+ K L ++ ++ Sbjct: 1 MGQKSNPQALR--TAAPYQQHESCWYHD-KYYSHLLSQDFMIRSYIEKRLKGCFPSASAK 57 Query: 55 IVIERPAKSIRVTIHTARPGIV--IGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELD 112 I + K +++ I + + + KK D+ K+ K ++ I +++ Sbjct: 58 IFLSSSPKELKLRIFSHGHLFLKRLKKKSYDISKILKKSSNTTSFS--IQCYQIKNEYKS 115 Query: 113 AKLVADSITSQLERR-------VMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIART 165 A +A+ +T ++R+ ++F R + A KGI+V GR G+E R Sbjct: 116 ALFLANLLTQAIKRKKMMSLPSLLFLRTINEASD-----FIKGIRVSCVGRFKGSERTRK 170 Query: 166 EWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 + ++ G LHT I+Y++ T+YG GVKVW+ Sbjct: 171 KKFQWGSTSLHTFSEKIEYSSQSISTSYGTFGVKVWV 207 >UniRef50_B3V6F1 Ribosomal protein S3 n=2 Tax=environmental samples RepID=B3V6F1_9EURY Length = 400 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 8/173 (4%) Query: 39 VRQYLTKELAKASVSRIVIER----PAKSIRVTIHTARPGIVIGKKGEDVEKL-RKVVAD 93 VR+YL KE +A + ER + +VT+ R G+VIG++G+ + +L R++ D Sbjct: 20 VREYLLKETERAGFGGLHFERAFDQTSICTKVTLQAERVGMVIGRRGKVINELQRRIRTD 79 Query: 94 IAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEV 153 ++ + E+ P L+A+++A + S LER FRRA +V N + GAKG + + Sbjct: 80 FNLENPKLQVEEIENPALNAQVMASKLASALERGWYFRRAGHSSVLNVIEAGAKGCLIII 139 Query: 154 SGRLGGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 +G+L G+ RTE + +G + T +D + A G IG V I K Sbjct: 140 AGKLTGSR-HRTEKFLKGHIKFCGETALTHMDVGQATAVVKLGTIGCTVAIMK 191 >UniRef50_Q85UK5 30S ribosomal protein S3, chloroplastic (Fragment) n=1 Tax=Orobanche minor RepID=Q85UK5_OROMI Length = 166 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 11/166 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQ----YLTKELAKAS----V 52 M QK++P RLG + +S WF K+++++L D K+R Y+ K+++ +S + Sbjct: 1 MAQKINPLVFRLGTTQNHHSLWFVQAKKYSESLQEDQKIRNLIKNYVQKKVSNSSDIEGI 60 Query: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLR-KVVADIAGVPAQINIAEVR--KP 109 + I I++ I+V I P ++I +E+L+ + + V + NIA R KP Sbjct: 61 APIEIKKRIDLIQVIIFMGFPKLLIESIPRGIEELQMNLQKEFHYVNRKFNIAITRITKP 120 Query: 110 ELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSG 155 + ++A+ I +QL RV FR+AMK+A++ + KGI+V++SG Sbjct: 121 YRNPNIIAEFIANQLNNRVSFRKAMKKAIELTEQANTKGIQVQISG 166 >UniRef50_C0KT93 Ribosomal protein S3 (Fragment) n=50 Tax=Halimeda RepID=C0KT93_9CHLO Length = 276 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 18/149 (12%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI +P S W+A+ K ++ L D +R L K+ AKA +I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADI------AGVPAQINIAEVRKPEL-- 111 ++ + + I +P ++IGKKGE+++KL + + + PA + KP+L Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 112 ---------DAKLVADSITSQLERRVMFR 131 A +AD + LE+R+ ++ Sbjct: 121 EVYVIRCQTGASSIADFLVENLEKRIPYK 149 >UniRef50_B9GND7 Predicted protein n=2 Tax=rosids RepID=B9GND7_POPTR Length = 74 Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 36/73 (49%), Positives = 51/73 (69%) Query: 134 MKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTY 193 MK+A++ + +KGI+V+++ L G +IAR EW REGRVPL TLRA I+Y + T Y Sbjct: 1 MKKAIELTEQSNSKGIQVQIAKHLDGKKIARAEWVREGRVPLQTLRAKINYCSYTVRTIY 60 Query: 194 GVIGVKVWIFKGE 206 V+G+K+WIF E Sbjct: 61 RVLGIKIWIFIDE 73 >UniRef50_C7NV53 Ribosomal protein S3 n=7 Tax=Archaea RepID=C7NV53_HALUD Length = 326 Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 92/169 (54%), Gaps = 4/169 (2%) Query: 38 KVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV 97 ++ ++ EL +A + + + ++ + +PG+VIGK G+++ K+ + + G+ Sbjct: 16 QIDEFFEDELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTTLEEEFGL 75 Query: 98 -PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 Q+++ EV +P+L+A++VAD + + LER FR+A + M GAKG ++ +SG+ Sbjct: 76 EDPQVDVQEVEEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESGAKGAEIVLSGK 135 Query: 157 LGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWIF 203 + GA +R E + G + + A+ +D+ A G IGV V I Sbjct: 136 VTGAR-SRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGVDVKII 183 >UniRef50_Q7YAL0 Ribosomal protein S3 n=1 Tax=Chara vulgaris RepID=Q7YAL0_CHAVU Length = 270 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%) Query: 112 DAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG-AKGIKVEVSGRLGGAEIARTEWYRE 170 A L+A I ++LE++ FR+ + Q + KGI++ SGR GAEIA+TE + Sbjct: 176 SASLIAQEICNKLEQKTSFRQICRSIFQQIEKCNYVKGIRISCSGRNNGAEIAKTECRKY 235 Query: 171 GRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 G+ LH IDY ++A T YG++GVKVW+ Sbjct: 236 GQTSLHVFSDKIDYAQAQASTPYGILGVKVWV 267 >UniRef50_A2BMC5 30S ribosomal protein S3P n=10 Tax=Thermoprotei RepID=RS3_HYPBU Length = 247 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 8/187 (4%) Query: 38 KVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV 97 ++ +YL K +A + + I + RV I+ RP ++IG++GE + +L + G+ Sbjct: 17 QIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIRQLAAIFEHEFGL 76 Query: 98 P-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 QI + V P+L+A++VA I LER +RR + + GA G+++ +SG+ Sbjct: 77 SNPQITVRRVENPDLNARVVASRIAVLLERGAYYRRVANVMARRVLNAGAIGVQIVISGK 136 Query: 157 LGGAEIARTEWYREGRVPLHTLRADIDYNTSEA--HTTY--GVIGVKVWIFKGEILGGMA 212 L E AR E R G+V +T ++Y A H T GV+G++V I K Sbjct: 137 L-RTERARYEKVRRGKV--YTTGHQVEYMVDRAVMHVTLKPGVLGIEVMIVKPAKPSDYV 193 Query: 213 AVEQPEK 219 ++QPE+ Sbjct: 194 RIKQPEE 200 >UniRef50_Q1XG99 Ribosomal protein S3 n=1 Tax=Physcomitrella patens RepID=Q1XG99_PHYPA Length = 535 Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 4/103 (3%) Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG-AKGIKVEVSGRLGG 159 + IA V + A L+A I+ +LE++ FR+ + Q + KGI++ SGRL G Sbjct: 433 VKIASVYQ---SASLIAQEISWKLEQKKSFRQICRSTFQQIEKCQYVKGIRICCSGRLNG 489 Query: 160 AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 AEIA+TE + G LH IDY ++A T YG++GVKVW+ Sbjct: 490 AEIAKTECRKYGETSLHVFSDQIDYAKAQASTPYGILGVKVWV 532 >UniRef50_Q2EEW0 Plastid 30S ribosomal protein S3 n=1 Tax=Helicosporidium sp. ex Simulium jonesi RepID=RR3_HELSJ Length = 241 Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 67/115 (58%) Query: 94 IAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEV 153 + + ++ I + P L+ + + + L + + RRA+ + N ++ GA+G+K+++ Sbjct: 126 LNNLKIKVKIKFLNNPILEPQWIFYKLHQDLYKGINIRRALAKISSNVIKKGAEGVKIQI 185 Query: 154 SGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 GR+ G + A +G++PL L ++I+Y + T YG++GVK+W+FKG +L Sbjct: 186 KGRINGVDKATVIVEEKGKMPLQNLSSEINYYSRALKTVYGLLGVKIWVFKGFLL 240 >UniRef50_Q8M1G0 Ribosomal protein S3 n=1 Tax=Chaetosphaeridium globosum RepID=Q8M1G0_CHAGL Length = 324 Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 54/107 (50%) Query: 96 GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSG 155 G I + + A +A I ++E + FR K N+ KGI++ SG Sbjct: 215 GATTTIRVIRLASMYQSAASIAADIVQKIESKKSFRSICKFLFSNSFGASIKGIRIACSG 274 Query: 156 RLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 R GAEIA+TE + G P H IDY ++A T YG++G+KVW+ Sbjct: 275 RFNGAEIAKTECRKYGASPFHVFSEKIDYAQTKASTPYGIMGIKVWV 321 >UniRef50_Q9HIR5 30S ribosomal protein S3P n=3 Tax=Thermoplasmatales RepID=RS3_THEAC Length = 225 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 4/171 (2%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP 98 V +Y+ KE A +V++R +T++ RPG+VIG++G V+++ + G+ Sbjct: 16 VCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKVQQMTDTLEKKYGIE 75 Query: 99 A-QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRL 157 QI + +V+ P+L+ ++A I LE+ +R+A ++ ++ GAKG+ +++SG++ Sbjct: 76 TPQIEVKDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKI 135 Query: 158 GGAEIARTEWYREGRVPLHTLRADIDYNT--SEAHTTYGVIGVKVWIFKGE 206 G E AR + + G V T S A G++GV V I E Sbjct: 136 SG-ERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTVKILNPE 185 >UniRef50_P26865 Ribosomal protein S3, mitochondrial n=2 Tax=Marchantiophyta RepID=RT03_MARPO Length = 430 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 6/122 (4%) Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL-GAKGIKVEVSGRLGG 159 + IA V + A L+A I+ +LE++ FR+ + + + KGI++ SGRL G Sbjct: 310 VKIASVYQ---SASLIAQEISWKLEQKKSFRQICRSIFKQIKKCPYVKGIRIGCSGRLNG 366 Query: 160 AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI--FKGEILGGMAAVEQP 217 AEIA+TE + G LH IDY ++A T YG++GVKVW+ F + G A+ + Sbjct: 367 AEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGVKVWVSYFLTQKKGTSCAISKT 426 Query: 218 EK 219 K Sbjct: 427 YK 428 >UniRef50_B3V6P6 Ribosomal protein S3 n=1 Tax=uncultured marine group II euryarchaeote KM3-130-D10 RepID=B3V6P6_9EURY Length = 367 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 4/169 (2%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL-RKVVADIAGV 97 VR+YL +E +A + R + +VT+ + G VIG++G+ + +L R++ D Sbjct: 20 VREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHELQRRLQNDFILE 79 Query: 98 PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRL 157 +++ EV + L A+++A + S LER FRRA QN M GA+G V +SG++ Sbjct: 80 NPHLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLVILSGKI 139 Query: 158 GGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 G R E +++G + T +D S A G IG V I + Sbjct: 140 TGPR-HRVEKFQQGHIKFCGETALEFMDTGFSTAVKKLGTIGCTVRIMR 187 >UniRef50_A4YCX2 30S ribosomal protein S3P n=3 Tax=Sulfolobaceae RepID=RS3_METS5 Length = 240 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 4/169 (2%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP 98 V ++L KE A + I + RVTI+ RP I+IGK G+ +++L +++ + Sbjct: 18 VDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIKRLAQILEKYFNLE 77 Query: 99 A-QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRL 157 QI + + KPEL+A+++A + LE+ FRRA ++ M GA G +V VSG++ Sbjct: 78 NPQITVTQPEKPELNARVMAFRLAVTLEKGYHFRRAAFMTIRRIMNAGALGAEVIVSGKI 137 Query: 158 GGAEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 +E A+ E +EG V + L +D + A G+ GV+V I K Sbjct: 138 -TSERAKFEKLKEGIVYKTGNNLDVMVDRAIAIATLKMGIYGVEVVITK 185 >UniRef50_C6FG16 Ribosomal protein S3 n=1 Tax=Isoetes engelmannii RepID=C6FG16_ISOEN Length = 399 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 4/95 (4%) Query: 112 DAKLVADSITSQLERRVMFRRA----MKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEW 167 A L+A I+ +LER+ F+R +R AKGI++ SGR GAEIA+TE+ Sbjct: 287 SASLIAKEISYELERKKSFQRICGLIFERIENCNCNKYAKGIRIRCSGRFKGAEIAKTEY 346 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 + G LH IDY + A T YG +GVKVW+ Sbjct: 347 IKSGETSLHVFSDQIDYAEAGASTPYGTLGVKVWV 381 >UniRef50_A0B9W4 30S ribosomal protein S3P n=3 Tax=Archaea RepID=RS3_METTP Length = 276 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 4/167 (2%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL-RKVVADIAGV 97 V +YL KEL +A +V+ R ++T++ +PG+VIGK G+ + KL R + Sbjct: 17 VDEYLAKELDRAGYGGMVMNRTPMGTQITVYAEKPGMVIGKGGKLIRKLTRDLERRFRLD 76 Query: 98 PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRL 157 QI++ +V K +L+A++VA+ + S LE FR+A + ++ M GA G ++ +SG+L Sbjct: 77 NPQIDVQDVGKSDLNARVVANRLASSLEHGWYFRKAGQSMLRRVMDSGALGCEIVISGKL 136 Query: 158 GGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 G +R E + G + A+ +D + A G IG +V I Sbjct: 137 TGPR-SRVEKFLAGYIKHSGKPAEEIVDTGYAVAVKKLGAIGCQVRI 182 >UniRef50_A0RVX9 30S ribosomal protein S3P n=2 Tax=Thaumarchaeota RepID=RS3_CENSY Length = 261 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 3/148 (2%) Query: 37 FKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL-RKVVADIA 95 K+R++L + + + S + +E+ + ++T+H RPGIVIG+KG + +L ++ D Sbjct: 15 MKLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFD 74 Query: 96 GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM-RLGAKGIKVEVS 154 Q+++ E+ PEL ++ + + S +ER FRRA +Q M + A G+++ +S Sbjct: 75 LKSPQVDVKEIETPELYPGVMCNRMASHIERGTAFRRATMWTIQQIMEKKDAMGVQITIS 134 Query: 155 GRLGGAEIARTEWYREGRVPLHTLRADI 182 G+L G A E + G +P AD+ Sbjct: 135 GKLRGDRSA-FEKHTSGILPRAGHYADV 161 >UniRef50_Q673S3 Ribosomal protein S3 n=4 Tax=environmental samples RepID=Q673S3_9EURY Length = 307 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 4/169 (2%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLR-KVVADIAGV 97 VR+YL +E +A + R + +VT+ + G VIG++G+ + +L+ ++ +D Sbjct: 21 VREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQYRLKSDFKLE 80 Query: 98 PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRL 157 ++ + E+ +P L+A+++A + S LER FRRA QN M GA+G + +SG++ Sbjct: 81 NPRLEVNEIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLIILSGKI 140 Query: 158 GGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 G R + +++G + T +D S A G +G V I + Sbjct: 141 SGPR-HRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLGTVGCTVRIMR 188 >UniRef50_Q9TCB0 Ribosomal protein S3 n=1 Tax=Nephroselmis olivacea RepID=Q9TCB0_NEPOL Length = 309 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 7/95 (7%) Query: 112 DAKLVADSITSQLERRV----MFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEW 167 A IT QLE++ ++ + MK+ +Q +GI++ V+GR+ G E+ARTE Sbjct: 215 SANFFVKEITYQLEKKSSINQIWNQVMKKVIQTP---SIQGIRLSVAGRINGVEMARTEI 271 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 + G+ LH+L +DY S A+T +G++GVK+WI Sbjct: 272 RKYGQTSLHSLSNKMDYACSHAYTPFGILGVKIWI 306 >UniRef50_D2DX40 Ribosomal protein S3 n=4 Tax=Podocarpaceae RepID=D2DX40_9CONI Length = 618 Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 3/124 (2%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN- 140 +V+K+R +++ I +++ A +A I+S+L R FR V++ Sbjct: 492 NEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSASPIAQDISSRLRDRKSFRSIFYEPVRDI 551 Query: 141 --AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGV 198 M GI++ SGRL GAEIARTE G+ + R IDY ++ T YG++GV Sbjct: 552 PLVMLKRVGGIRICCSGRLKGAEIARTECMEYGKTSCNAFRHRIDYASARVSTRYGILGV 611 Query: 199 KVWI 202 KVWI Sbjct: 612 KVWI 615 >UniRef50_Q5QJE0 Ribosomal protein S3 n=20 Tax=Spermatophyta RepID=Q5QJE0_CYCRE Length = 579 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 6/126 (4%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLER-----RVMFRRAMKR 136 +V+K+R +++D I ++ A L+A I+ QL R +F + + R Sbjct: 437 NEVQKMRSLLSDGTNTNTSIGSVKIESVYQSASLIAQDISFQLRNGTGSFRSIFGQIV-R 495 Query: 137 AVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVI 196 + M KGI++ SGRL GAEIARTE G+ + IDY +++ T YG++ Sbjct: 496 DITFVMPKRVKGIRICCSGRLKGAEIARTECREYGKTSCNVFDHKIDYASAKVCTRYGIL 555 Query: 197 GVKVWI 202 GVKVWI Sbjct: 556 GVKVWI 561 >UniRef50_Q5PXB8 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda cuneata RepID=Q5PXB8_9CHLO Length = 160 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 9/162 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI +P+ S W+A+ K+++ + D +R L K+ +A +I I R Sbjct: 1 MGQKVHPLGFRLGITQPYLSNWYASKKDYSKYVLEDHLIRTLLFKKYNRAKFDKITIFRN 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN-----IAEVRKPELDA- 113 + + + I+ +P I++G G +L+K + + N I + +++A Sbjct: 61 IEDHVEIFIYAQKPEILLGTTG--ARQLQKQIKTSIFQHRKRNSRLKVILSIFCCKINAS 118 Query: 114 KLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSG 155 +AD I LERR+ ++ + + R G+KV++SG Sbjct: 119 SAIADFIVEHLERRIPYKVVLTLLKKYLKRNKPLGMKVKISG 160 >UniRef50_Q18GF5 30S ribosomal protein S3P n=7 Tax=Euryarchaeota RepID=RS3_HALWD Length = 323 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 4/184 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A+ +F +N ++ ++ EL +A + + + ++ + +PG+VIGK G+ Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60 Query: 83 DVEKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 ++ K+ + + D + QI++ EV +P+L+A++VAD + + LER FR+A + Sbjct: 61 NIRKVTRELEDRFNLDDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRI 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 + GA G ++ +SG++ GA +R E + G + + A +D A G IGV Sbjct: 121 IESGALGAEIVLSGKVTGAR-SRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVT 179 Query: 200 VWIF 203 V I Sbjct: 180 VKII 183 >UniRef50_Q5PSC9 Ribosomal protein S3 (Fragment) n=20 Tax=Halimeda RepID=Q5PSC9_9CHLO Length = 291 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 1/95 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI +P S W+A+ K ++ + D +R L K+ AKA +I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADI 94 ++ + + + +P ++IGKKGE+++ +K + + Sbjct: 61 IENHLELVLRAQKPEVLIGKKGENLKNFQKEIKKL 95 >UniRef50_C1KRI4 Ribosomal protein S3 n=1 Tax=Micromonas sp. RCC299 RepID=C1KRI4_9CHLO Length = 319 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 9/104 (8%) Query: 105 EVRKPELDAKLVADSITSQLER------RVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLG 158 +++ A VA I Q E+ R +F+ +K+ V+ +G I++ ++GR+G Sbjct: 215 KIKNAFTSASFVAHYIALQFEQNKKKPFRSIFQDVLKQCVKTPQLVG---IRIAIAGRIG 271 Query: 159 GAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 GAE+AR E + G+ LH IDY+ + A+T +G++GVKVW+ Sbjct: 272 GAEMARVEQTQYGQTSLHVFSHTIDYHATSAYTPHGLLGVKVWM 315 >UniRef50_B2MWV7 Ribosomal protein S3 n=1 Tax=Hemiselmis andersenii RepID=B2MWV7_9CRYP Length = 219 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 39/232 (16%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT------------KELA 48 MGQK+ N + L K WNS W+ + + D + YL K L Sbjct: 1 MGQKIVVNSLHLKKNKNWNSFWYVDFNAYLPVFREDLYLYLYLRSFSKLKYNILKRKHLY 60 Query: 49 KASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQI-----NI 103 + + + I R KS+ + + ++G K + ++K +D Q+ N Sbjct: 61 QIEIVKCFIYRIDKSLVLNLQ------LMGLKTKQLKK-----SDFPFFMKQLLIRLKNF 109 Query: 104 AEVRKPEL---------DAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 + A A + + LE+RV F+ M + + +L GI++ Sbjct: 110 FNYKNNRFVIYYKIGKSTALFTALRVATLLEKRVRFQSQMVKKI--IKQLNVAGIRISCK 167 Query: 155 GRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 GRL + A G VPL T++A+IDY A+T G+ VKVWI E Sbjct: 168 GRLNFVDRATKAQLSSGSVPLQTIKANIDYGLIVANTKKGLQSVKVWILNKE 219 >UniRef50_Q0P3H9 Mitochondrion, complete genome n=1 Tax=Ostreococcus tauri RepID=Q0P3H9_OSTTA Length = 277 Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 3/93 (3%) Query: 112 DAKLVADSITSQLERRVMFRRAMKRAVQNAMRL--GAKGIKVEVSGRLGGAEIARTEWYR 169 A+ VA+ ++ LER+ ++ +VQ ++ +G K+ SGRL G E+A+ E ++ Sbjct: 182 SAQFVAEYVSHALERQKPVKQIFS-SVQTLLKKDPNVEGFKISCSGRLQGVEMAKIETFK 240 Query: 170 EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 G++ LH + +DY + A TT+G++GVKVWI Sbjct: 241 FGKISLHVFTSKVDYAEARALTTFGILGVKVWI 273 >UniRef50_A1RXG6 30S ribosomal protein S3P n=1 Tax=Thermofilum pendens Hrk 5 RepID=RS3_THEPD Length = 202 Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 4/169 (2%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP 98 + +YL ++L +A+ + +V ++ PG+VIG+KG +++ + +V+ G+ Sbjct: 18 LNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGIE 77 Query: 99 -AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRL 157 QI++ EV +L+AK++A + L R V FRRA A+ M GA+G ++ +SG+L Sbjct: 78 NPQIDVVEVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKL 137 Query: 158 GGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWIFK 204 ++ RTE + G VP + +D G+ GVKV I K Sbjct: 138 -TSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIMK 185 >UniRef50_P46740 Ribosomal protein S3, mitochondrial n=1 Tax=Prototheca wickerhamii RepID=RT03_PROWI Length = 500 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%) Query: 113 AKLVADSITSQLERRVMFRRAMKRAV-QNAMRLGAKGIKVEVSGRLGG----AEIARTEW 167 A +AD I +ERRV F R R + Q +M+ +GI++ SGR+GG A+ A E Sbjct: 403 AGFIADEIVYFIERRVSFSRIKNRILRQASMQSYVRGIRITCSGRVGGKSKKAQRATQEC 462 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 + G LH ID+ + A+T++G++G+KVWI Sbjct: 463 VKYGETSLHVFECKIDFASRIANTSFGLVGIKVWI 497 >UniRef50_D2DWK6 Ribosomal protein S3 (Fragment) n=1 Tax=Gnetum montanum RepID=D2DWK6_9SPER Length = 684 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 9/137 (6%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQL---ERRVMFRRAMKRAV 138 +V K+R +++D ++ A L+A I+ QL R FR + V Sbjct: 538 NEVRKVRSLLSDRTNTNTFFGSVKIESVYQSASLIAQDISFQLRGRNRTRSFRSIFSQIV 597 Query: 139 QNAMRL------GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTT 192 ++ G +GI++ SGRL GAEIARTE G+ ++ IDY +++ T Sbjct: 598 RDIPNPKVMPPKGVRGIRICCSGRLKGAEIARTECREYGKTSINVFCQKIDYASAKVSTR 657 Query: 193 YGVIGVKVWIFKGEILG 209 YG++GVKVWI + G Sbjct: 658 YGILGVKVWISYSSVKG 674 >UniRef50_C7DIC2 Ribosomal protein S3-domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIC2_9EURY Length = 207 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 97/180 (53%), Gaps = 5/180 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 + F D+ + ++L EL+KA SR+ I++ R+T++ PG VIG+ G+ ++ Sbjct: 5 RRFIDDAIIKLNISKFLGTELSKAGFSRVEIQKTPIITRITVYVLNPGRVIGRGGKAIDD 64 Query: 87 LRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 L + + V +I++ EV+ ++ LVA I +LER + R+ ++ +++ M G Sbjct: 65 LTETIKSRFNVNNPRISVVEVQNKMIEPLLVAKDIAFKLERGINPRKIIQFTLKSIMENG 124 Query: 146 AKGIKVEVSGRLGGAEIARTEWYRE--GRVP-LHTLRADIDYNTSEAHTTYGVIGVKVWI 202 A G ++ +SG+L A+ AR + R+ G +P + ++ + A+ YG IGV V I Sbjct: 125 ALGAEIIISGKL-AAKGARAKSIRKSVGYIPKAGDVINLVNKGVATAYPKYGAIGVVVRI 183 >UniRef50_B3T598 Putative ribosomal protein S3, C-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T598_9ZZZZ Length = 214 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 4/175 (2%) Query: 31 DNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKV 90 + D + +YL K + A I R+TI+ +PG+VIG++G + +L + Sbjct: 3 EKFSRDSGIDEYLEKNIESAGYGGFEIITSPVGTRITIYVTKPGLVIGRRGIGIRELTEN 62 Query: 91 VADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGI 149 + I + QI++ EV PE +A+++ + + + R FRRA V MR GA G Sbjct: 63 LEKIFELQNLQISVFEVEIPEQNARIMCNRVAQTVARGTAFRRAAMWTVNAIMRSGALGA 122 Query: 150 KVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYN--TSEAHTTYGVIGVKVWI 202 ++ ++G+L +E + TE Y++G VP A + S+ G+ G++V I Sbjct: 123 EIIIAGKL-RSERSHTEKYKDGVVPKTGYPATLTVREAVSDVKLKMGLYGIQVKI 176 >UniRef50_Q6E789 Ribosomal protein S3 n=1 Tax=Saprolegnia ferax RepID=Q6E789_SAPFE Length = 296 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 47/250 (18%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVS--RIVIE 58 MGQK+ P +RL K W+S W K +A+ L D ++R+Y+ L +S +I I Sbjct: 1 MGQKIIPISLRLKNRKNWHSQWIVEKKNYAEILHFDLELRKYIETLLNNKKISTLQIKIN 60 Query: 59 RPAKS--IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQ---------------- 100 + +K+ I V +H ++ K+ + L + + + Sbjct: 61 KVSKNLYIYVFVHNTFKKEILKKQSNILFHLNSYLNNKYNIKLFFLKAHFKLNNYQKNLR 120 Query: 101 ----------------------INIAEVRKPELDAKLVADSITSQLERRVMFR---RAMK 135 ++I ++ +++ I ++++ + R + Sbjct: 121 FYIYKYLKKKRRRLKDKKILKFLSICQIAFTLGKMNIISKYIVRTIKKKKIHRGYLNFIN 180 Query: 136 RAVQNAMRLGAK--GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTY 193 R ++ ++ +K G K++V GR+ GA+ R Y+EGR+PL +L +I Y E T Sbjct: 181 RILKEYFKMNSKILGYKLQVKGRVNGAKRKRKLVYQEGRIPLSSLDKNIQYTFDEFITKS 240 Query: 194 GVIGVKVWIF 203 GV VK+W + Sbjct: 241 GVCSVKMWFY 250 >UniRef50_A8B8Z2 Ribosomal protein S3 n=2 Tax=Giardia intestinalis RepID=A8B8Z2_GIALA Length = 217 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 6/189 (3%) Query: 28 EFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL 87 ++ ++ + ++ ++ ++EL A + + R SI V I A P +V+G + K+ Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75 Query: 88 RKVVAD-IAGVPAQINI--AEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 ++A P NI ++ K L A+++ D++ ++LE + RRA ++ AMR Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRA 135 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVKVWI 202 GA G +V V+G+L A+ AR ++EG + H R + T GVIGVKV I Sbjct: 136 GAAGCEVIVAGKL-RAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKVRI 194 Query: 203 FKGEILGGM 211 + I G + Sbjct: 195 YNPNIRGAV 203 >UniRef50_D2DX66 Ribosomal protein S3 n=2 Tax=Taxaceae RepID=D2DX66_TORCL Length = 802 Score = 67.8 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 4/124 (3%) Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVM-FRRAMKRAVQN- 140 +V K+R +++ I ++ A +A I+SQL FR R V++ Sbjct: 676 EVRKMRSLLSGGTNANTSIGSVKIESVYQSASPIAQDISSQLRDGTRSFRSIFGRIVRDI 735 Query: 141 --AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGV 198 M G GI++ GRL GAEIARTE G+ + R IDY ++ T YG++GV Sbjct: 736 PLVMPKGVGGIRICCPGRLKGAEIARTECREYGKTSCNAFRHQIDYAYAKVSTRYGILGV 795 Query: 199 KVWI 202 KVWI Sbjct: 796 KVWI 799 >UniRef50_O26116 30S ribosomal protein S3P n=6 Tax=Euryarchaeota RepID=RS3_METTH Length = 258 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%) Query: 38 KVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV 97 ++ +YL KEL +A + ++ V ++ RPG+VIG+ G+ V + + + + + Sbjct: 15 RIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVRAITQKLKNKFDL 74 Query: 98 P-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 Q+ + EV PEL+ K++A I + L+R + FRR ++ M GA+G++V +SG+ Sbjct: 75 ENPQVEVKEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGK 134 Query: 157 LGGAEIARTEW 167 + GA A ++ Sbjct: 135 IRGARSATAKF 145 >UniRef50_A3MTL3 30S ribosomal protein S3P n=2 Tax=Thermoproteaceae RepID=RS3_PYRCJ Length = 216 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 4/124 (3%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP 98 ++++L LAK I + R+ I+ RP +IG+KG V+++ ++A+ GV Sbjct: 24 IKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSSILANKLGVE 83 Query: 99 -AQINIAEVRK---PELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 QI++ +V K PEL K+VA I + + R V FRR M AV+ M GAKG ++ VS Sbjct: 84 NPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQLMEAGAKGFEIVVS 143 Query: 155 GRLG 158 G+L Sbjct: 144 GKLS 147 >UniRef50_A4ZHA7 Ribosomal protein S3 n=8 Tax=Phytophthora RepID=A4ZHA7_9STRA Length = 276 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/250 (20%), Positives = 107/250 (42%), Gaps = 50/250 (20%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL----------------- 43 MGQK+ P +RL K WNS W N E+++ L D ++++Y Sbjct: 1 MGQKIIPISLRLDKKKNWNSKWIVNNDEYSNLLHFDLEIKKYFENIFNYKNLKLIDLNIV 60 Query: 44 ---------------TKELAKASVSRIV----IERPAKSIRVTIHTARPGIVIG------ 78 +K+ K S ++I+ + +I++ I + I Sbjct: 61 KTSNNINVYVYIQKNSKKYYKLSYNKIINHLNLYFLNHNIKLFIKNVQFFEFIKLRRNLK 120 Query: 79 KKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVM---FRRAMK 135 K + ++K ++ ++ + + A K + ++ I LER+ F + Sbjct: 121 KIFDKIKKNNRINKNVKKMIYNFSYAFYTK---NINIITFYIKQTLERKKTHKKFINNID 177 Query: 136 RAVQNAMRLGAK--GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTY 193 +Q ++ + G +++ GRL ++ + +++G++PL+TL DI Y+ +E T Sbjct: 178 NMLQEFFKMFSNFVGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPS 237 Query: 194 GVIGVKVWIF 203 G+ +K+W+F Sbjct: 238 GICSIKLWVF 247 >UniRef50_D2DX72 Ribosomal protein S3 n=1 Tax=Cephalotaxus sinensis RepID=D2DX72_9CONI Length = 763 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 4/124 (3%) Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVM-FRRAMKRAVQN- 140 +V K+R +++ I ++ A +A I+ QL FR + V++ Sbjct: 637 EVRKMRSLLSGGTNANTSIGSVKIESVYQSASSIAQDISFQLRDGTRSFRSIFGQIVRDI 696 Query: 141 --AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGV 198 M G GI++ SGRL GAEIARTE G+ + R IDY ++ T YG++GV Sbjct: 697 PLVMPKGVGGIRICCSGRLKGAEIARTECREYGKTSCNAFRHQIDYAYAKVSTRYGILGV 756 Query: 199 KVWI 202 KVWI Sbjct: 757 KVWI 760 >UniRef50_D2DX51 Ribosomal protein S3 n=19 Tax=Cupressaceae RepID=D2DX51_9CONI Length = 663 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV-MFRRAMKRAVQN 140 +V K+R +++ I +++ A +A I+ QL FR + + V+ Sbjct: 531 NEVRKMRSLLSGGTNANTFIGSVKIKYVYQSASPIAQDISFQLRDGTRSFRSILWKIVRG 590 Query: 141 ------AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 +R G GI++ GRL GAEIARTE G+ +T R IDY ++ T YG Sbjct: 591 ISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKTSCNTFRHQIDYAYAKVSTRYG 650 Query: 195 VIGVKVWI 202 ++GVKVWI Sbjct: 651 ILGVKVWI 658 >UniRef50_UPI00016B245A 30S ribosomal protein S3 n=1 Tax=candidate division TM7 single-cell isolate TM7b RepID=UPI00016B245A Length = 118 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 17/104 (16%) Query: 100 QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVE------- 152 QINI EVRKPELDA +V +I Q+E +V +RRA+K A+ N MR GA+GIK + Sbjct: 10 QINIFEVRKPELDANIVGMNIARQVEGKVAYRRAIKMAIANTMRAGAEGIKFKEDTPWRN 69 Query: 153 -------VSGRLGGAEIAR--TEWY-REGRVPLHTLRADIDYNT 186 V+ I R + W+ RE P TL I N Sbjct: 70 WSNPASRVTFSFTHTHICRFTSNWFVREYSNPDLTLTIHITINC 113 >UniRef50_D2DX63 Ribosomal protein S3 n=1 Tax=Sciadopitys verticillata RepID=D2DX63_SCIVE Length = 786 Score = 63.9 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 2/122 (1%) Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVM-FRRAMKRAVQNA 141 +V K+R +++D I ++ A +A I+ +L R FR + V+ Sbjct: 662 EVRKMRSLLSDRTNTHTFIGSVKIESVYQSASPIAQDISLKLRDRTRSFRSIFNQIVREM 721 Query: 142 MR-LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKV 200 R G +GI++ SGR GAEIARTE G+ + IDY ++ T YG++GVKV Sbjct: 722 PRGQGVRGIRICCSGRSKGAEIARTECREYGKTSCNAFCHKIDYAYAKVSTRYGILGVKV 781 Query: 201 WI 202 WI Sbjct: 782 WI 783 >UniRef50_D2DXC4 Ribosomal protein S3 n=9 Tax=Cupressaceae RepID=D2DXC4_THUDO Length = 613 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV-MFRRAMKRAVQN 140 +V K+R +++ I +++ A +A I+ Q FR + + V++ Sbjct: 481 NEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDISFQPRDGTRSFRSILWKIVRD 540 Query: 141 A------MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 +R G GI++ GRL GAEIARTE G+ +T R IDY ++ T YG Sbjct: 541 ISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKTSCNTFRHQIDYAYAKVSTRYG 600 Query: 195 VIGVKVWI 202 ++GVKVWI Sbjct: 601 ILGVKVWI 608 >UniRef50_Q95749 Ribosomal protein S3, mitochondrial n=5 Tax=Brassicaceae RepID=RT03_ARATH Length = 556 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 3/138 (2%) Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-RRVMFRRAMKRAVQNA 141 +V+K+R +++ I +++ A L+A I+ QL+ +R F + V+ Sbjct: 419 EVKKMRSFLSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEI 478 Query: 142 MRLGAKGIKVEVSGRL-GGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKV 200 + G +GI++ SGRL AE A+T+ Y+ + + IDY E T YG++GVKV Sbjct: 479 PK-GVEGIRICFSGRLKDAAEKAQTKCYKHRKTSCNVFNHKIDYAPVEVFTRYGILGVKV 537 Query: 201 WIFKGEILGGMAAVEQPE 218 WI + G A E E Sbjct: 538 WISYSQKKGRRAISETYE 555 >UniRef50_UPI000038E231 30S ribosomal protein S3P n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E231 Length = 228 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 4/181 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+F + V +YL E A + ++R +T++ RPG+VIG+ G ++ Sbjct: 10 KKFVSDNIKKLLVTEYLQSENDSAGFGGMDMKRTPFGTNITLYVNRPGLVIGRHGSKIKA 69 Query: 87 LRKVVADIAGVPA-QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 + ++ G+ + QI + EV +L+ ++++ I LE+ +R+A ++ + Sbjct: 70 MTSILETKYGLESPQIEVKEVENADLNPQVISKKIALSLEKGWNYRKAGNTTLRRIIDQH 129 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVKVWIF 203 A+G+ + + G++ G E ART+ + G + RA + S A G IG+ V + Sbjct: 130 ARGVLIRIGGKISG-ERARTQKFMYGEIKYSGEPARAGVITGYSVAMLKTGAIGIYVRLL 188 Query: 204 K 204 + Sbjct: 189 R 189 >UniRef50_Q5PX34 Ribosomal protein S3 (Fragment) n=73 Tax=Halimeda RepID=Q5PX34_9CHLO Length = 181 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 22/149 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G R+GI +P S W+A+ + ++ + D +R L K+ +A+ S+I I R Sbjct: 1 MGQKVHPLGFRVGITQPHLSQWYASKRYYSQYVLEDNFIRTILLKKYKRANFSKIHISRK 60 Query: 61 A-KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN--IAEVRKPELDAKL-- 115 + IH GI+IG K E EK QI I R+ E ++KL Sbjct: 61 TDDHFEIVIHAQNLGILIGTKSEKSEK----SEKFKLFQKQIKEFIFHYRQSEWNSKLRV 116 Query: 116 -------------VADSITSQLERRVMFR 131 +AD I LERRV ++ Sbjct: 117 VLHIFRCKTSASSIADFIVEHLERRVPYK 145 >UniRef50_B1L650 Ribosomal protein S3 n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L650_KORCO Length = 251 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 96/192 (50%), Gaps = 6/192 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIER-PAKSIRVTIHTARPGIVIGKKGEDVE 85 K+F +K+ +++ K KA + I P + I +T++ PG++IG+ G + Sbjct: 11 KKFVQEGIVKYKLHEFMEKISDKAGFHGVEISSTPIRDI-ITVYVESPGVMIGRGGRTSK 69 Query: 86 KLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 ++ ++ + G+ I +V KP L ++VA I ++ + +++ A+ M Sbjct: 70 RISDILKEELGIQNPYIQAKKVDKPFLSTRIVASYIARRIAKGERYKKVAYSALGRVMAE 129 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 GAKG+++ +SG+ G++ AR E +REG + +++Y G+IGV+V I Sbjct: 130 GAKGVEIRLSGKF-GSQRAREERFREGVIYRCGQDYIENVEYAVKHVLMPQGMIGVRVRI 188 Query: 203 FKGEILGGMAAV 214 K + G A V Sbjct: 189 VKPGVRGPDAVV 200 >UniRef50_A4WIY8 30S ribosomal protein S3P n=4 Tax=Thermoproteaceae RepID=RS3_PYRAR Length = 220 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 5/132 (3%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP 98 ++++L L+K I + R+ I+ RP +IG+KG V+++ ++A GV Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 83 Query: 99 -AQINIAEVRK---PELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 QI++ +V K PE+ K+VA I + + + V FRR M A++ GAKG ++ VS Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 143 Query: 155 GRLGGAEIARTE 166 G+L E AR E Sbjct: 144 GKL-STERARFE 154 >UniRef50_A3DNB3 30S ribosomal protein S3P n=2 Tax=Desulfurococcaceae RepID=RS3_STAMF Length = 224 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 4/179 (2%) Query: 29 FADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLR 88 F D + ++L A + + + + RV I+ PG +IG+ G + KL Sbjct: 10 FIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIRKLM 69 Query: 89 KVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK 147 ++ G+ I ++ V P+L+A++VA I LE+ + +RR ++ M GA Sbjct: 70 TIMQTHFGLENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEAGAV 129 Query: 148 GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWIFK 204 G ++ +SG+L +E AR E + GR+ D +D +A GV GV+V I + Sbjct: 130 GAEIIISGKL-RSERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVIVR 187 >UniRef50_B9TAP3 60S ribosomal protein L16, putative n=2 Tax=Spermatophyta RepID=B9TAP3_RICCO Length = 668 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV-MFRRAMKRAVQN 140 +++K+R ++++ I +++ A +A I+ QL + FR + V++ Sbjct: 420 NEMKKMRSLLSNRTNTNTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKD 479 Query: 141 ---AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 197 M+ G +GI++ SGRL GAEIARTE + G+ + IDY +E T YG+ G Sbjct: 480 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 539 >UniRef50_A4KYC4 Ribosomal protein S3 (Fragment) n=3 Tax=Chrysobalanaceae RepID=A4KYC4_9ROSI Length = 389 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQL-ERRVMFRRAMKRAVQN 140 ++++K+R ++++ I +++ A +A I+ QL +R FR + V++ Sbjct: 273 KEMKKMRSLLSNRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKD 332 Query: 141 ---AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 M+ G +GI++ SGRL GAEIARTE + G+ + IDY +E T YG Sbjct: 333 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 389 >UniRef50_D2DX78 Ribosomal protein S3 n=2 Tax=Araucariaceae RepID=D2DX78_ARAHE Length = 731 Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 7/126 (5%) Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS----ITSQLER--RVMFRRAMKR 136 +V K+R +++D I ++ A L+A + S ++R R +F + + R Sbjct: 604 EVRKMRSLLSDGTNTNTFIAPVKIESVFQSASLIAQDTSFLLKSNIKRSFRSIFNQIV-R 662 Query: 137 AVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVI 196 ++ R +GI++ SGRL GA+IARTE + + + IDY ++ T YG++ Sbjct: 663 SIPKVTRERVRGIRIRCSGRLKGAKIARTEHRKYRKPSCNAFGRKIDYAYAKVFTRYGIL 722 Query: 197 GVKVWI 202 GVKVWI Sbjct: 723 GVKVWI 728 >UniRef50_Q9G4C6 Ribosomal protein S3 n=1 Tax=Thraustochytrium aureum RepID=Q9G4C6_9STRA Length = 251 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 23/177 (12%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKG-EDVEKLRKVVADIAGV 97 V YL +L + +++P K ++I G +G +D++ + +++ + + Sbjct: 83 VDFYLFVKLLCKYIEFFFLKKPIKIYLISIKPTSNGKFFRSRGLKDIQDVLQILDNFP-L 141 Query: 98 PAQINI---AEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 +N A++ K K++ D+I Q++ F +K GIK+ + Sbjct: 142 HKTLNFFICAQLEKENHHQKII-DTIFQQVKINFQFYTKVK------------GIKISIK 188 Query: 155 GRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI-----FKGE 206 GR+ G++ ++T G +PL++ A+I +N T +GV GVK++I FK E Sbjct: 189 GRVNGSDRSKTHLLELGSIPLNSFNANIFFNFQHVVTAFGVYGVKIYINYSNNFKNE 245 >UniRef50_Q8TX35 30S ribosomal protein S3P n=1 Tax=Methanopyrus kandleri RepID=RS3_METKA Length = 227 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 5/110 (4%) Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA 160 I + E+ PEL+ ++VA + S LER + FRRA A++ M GAKG + +SG+L GA Sbjct: 88 IEVKELPSPELNPRVVARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGA 147 Query: 161 EIARTEWYREGRVPLHTLRADIDYNTS---EAHTTYGVIGVKVWIFKGEI 207 ARTE + EG V D +Y +A T G IGV V I ++ Sbjct: 148 R-ARTEKFMEGAVKYCGEPGD-EYMIEGYVQAVTKPGAIGVTVRIMPPDV 195 >UniRef50_O21249 Ribosomal protein S3 n=1 Tax=Reclinomonas americana RepID=O21249_RECAM Length = 287 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/274 (21%), Positives = 114/274 (41%), Gaps = 74/274 (27%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELA---KASVSRIVI 57 MGQKV+P +R+G+ + W+S W ++ K++ L+ D +R ++ ++L + + ++ I Sbjct: 1 MGQKVNPISLRIGVNQMWDSRW-SHDKKYGKYLEQDLLIRSFI-EDLCGYQEIFIGKLSI 58 Query: 58 ERPAKSIRVTIH-----TARPGIVIG---------------KKGEDVEKLRKVVADIAG- 96 R +T++ T +P + I +K E + L + + Sbjct: 59 WRSCSMNSLTVNLTDTNTVKPNLFIYFQMYVPYKTYSTNKEQKQEWLSNLENTIYNYLED 118 Query: 97 -VPAQINIAEV----------------RKPELDAKLVADSITSQLERRVMF--------- 130 NI+ + +K E+D D I L + + Sbjct: 119 RFRNTFNISLLIDPIFEENSGDSKRSKQKTEIDFTFNNDVIKWLLNKDCLMISQWIANEF 178 Query: 131 --RRAMK---RAVQNA----------MRLGAKGIKVEVSGRLGGAE-------IARTEWY 168 R+ +K R ++ ++ GIK+ SGR + +AR + + Sbjct: 179 QKRKGLKEVCRIIEKCFDHIKTEAIDLKYRIDGIKITCSGRFKMTDNEKRRNKMARIKTF 238 Query: 169 REGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 ++G++PL TL I+Y+ + A+T G G+KVWI Sbjct: 239 KKGQIPLQTLSKHINYHLATAYTPDGTSGIKVWI 272 >UniRef50_Q9G8W8 Ribosomal protein S3 n=1 Tax=Rhodomonas salina RepID=Q9G8W8_RHDSA Length = 202 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 6/202 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT-KELAKASVSRIVIER 59 M ++ + N +RL + K W S WF+ ++ L +D + +Y K S+ ++ I R Sbjct: 1 MTKRSNTNNLRLMLNKDWVSNWFSEKSQYPIFLQNDLIIYKYFFWHYYFKESLLKMRIIR 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 ++ I + + ++ K + L + + + + K ++ +A Sbjct: 61 FSRKIILFFLISYDRKIMLKDFK--LNLNTFLFKAKNIFLVLYKNKFFKS--NSFYIAKK 116 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I + +E +V FR + + + N +L K + V GR+ G E+A+ ++ +G +P Sbjct: 117 IATLIENKVRFRSTVVKKLLNDAKL-VKSLLVVCKGRINGVEMAKKDFLVKGSIPFQKFH 175 Query: 180 ADIDYNTSEAHTTYGVIGVKVW 201 ++++ A+T G + VKVW Sbjct: 176 VKLNFSQVIANTLKGSVIVKVW 197 >UniRef50_C1QG67 SSU ribosomal protein S3P n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QG67_9SPIR Length = 73 Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 32/43 (74%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL 43 MGQKV P G+RLGI K W+S WF +++ +AD+L D +R+Y+ Sbjct: 1 MGQKVSPIGLRLGINKTWSSKWFEDSRTYADSLHEDLSIRRYI 43 >UniRef50_Q74MZ4 30S ribosomal protein S3P n=1 Tax=Nanoarchaeum equitans RepID=RS3_NANEQ Length = 230 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 10/183 (5%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 ++F N ++++ L A+VS+++I + RV I++ARP ++ ++ + K Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEERKAHLAK 66 Query: 87 LRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV-MFRRAMKRAVQNAMRLG 145 L ++ + P I + + P LDA ++A+ + +ER + +RR +R ++ M G Sbjct: 67 LLELKFGLEK-PV-IEVLPIENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIMNAG 124 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRV----PLHTLRADIDYNTSEAHTTYGVIGVKVW 201 A G ++ ++GRL G +T ++ G + + D +N A+ GV G+ V Sbjct: 125 AIGAEIVIAGRLSGQR-GKTWRFKAGNLRKTGTIGQFELDRAFNI--AYLKPGVAGIHVT 181 Query: 202 IFK 204 I K Sbjct: 182 ILK 184 >UniRef50_Q8SQM3 40S ribosomal protein S3 n=2 Tax=Apansporoblastina RepID=RS3_ENCCU Length = 228 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%) Query: 29 FADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLR 88 F N + +++++ K L S + + I++ + A+P IG+K + + + Sbjct: 22 FMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQFQ 81 Query: 89 KVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 + A VP +I + +V + L A + A+ I ++ V +RRA+ A++ A Sbjct: 82 HLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAK 141 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDY-NTSEA--HTTYGVIGVKVWI 202 A+G ++ VSG+L G A++ +++G V +H+ A DY NT A T GVIG++V I Sbjct: 142 AQGCQIIVSGKLKGQR-AKSVKFQDG-VLIHSGDAVKDYINTGYATVETKQGVIGIQVRI 199 Query: 203 F 203 Sbjct: 200 M 200 >UniRef50_Q9MTE3 Ribosomal protein S3 n=1 Tax=Toxoplasma gondii RepID=Q9MTE3_TOXGO Length = 224 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 9/130 (6%) Query: 77 IGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKR 136 I KK +++ L++ IN ++ P + + + ++ + R+ +K+ Sbjct: 99 IYKKIDNLNNLKQ------KYYIYINFLILKNPFSSITYLFYYVIKKFKQTLSLRKILKQ 152 Query: 137 A---VQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTY 193 + N + KGIK+ VSG++ G IA+ E G + +I YN T + Sbjct: 153 LSLLILNIKKTSIKGIKILVSGKINGVVIAKKETCNYGLNYFNKYVYNIKYNVFYLKTKF 212 Query: 194 GVIGVKVWIF 203 GV+G K WIF Sbjct: 213 GVLGFKFWIF 222 >UniRef50_Q6UVR6 Ribosomal protein S3 n=1 Tax=Pseudendoclonium akinetum RepID=Q6UVR6_PSEAK Length = 525 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Query: 147 KGIKVEVSGRLGGAE-IARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 KG+++ SGRLGG + +A+T GRVPL TLR +D+ T G +GVKVWI Sbjct: 466 KGLRITFSGRLGGKKGMAKTLTKTTGRVPLSTLREKVDFAKGVVQTKMGSLGVKVWI 522 >UniRef50_C1KR88 Ribosomal protein S3 n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1KR88_9CHLO Length = 310 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 12/142 (8%) Query: 70 TARPGIVIGKKG---EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLER 126 ++R +V G K + V + +++ G + +++ A VA + Q E Sbjct: 168 SSRVFLVKGSKALVSDYVPHVEAILSKTTGTQVVWEVYKMKHVFSSASFVAHYMAIQFET 227 Query: 127 ------RVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 R +F + + +++A +G ++V ++GR+ A A T+ + G+ LH Sbjct: 228 QRKKPFRAIFEDVVSKCIKHAHIVG---VRVVIAGRIRNAAKASTQMAKYGQTSLHVFSH 284 Query: 181 DIDYNTSEAHTTYGVIGVKVWI 202 IDY ++ AH+ G++G+KVW+ Sbjct: 285 AIDYASTSAHSKNGLLGIKVWL 306 >UniRef50_D2EEG8 KH type 2 domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEG8_9EURY Length = 223 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 71/132 (53%), Gaps = 3/132 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+ N +D R+YL K+ ++ +S I IE+ +++ I T +PG +I + + + + Sbjct: 4 KKIVANRVNDETAREYLFKKFSRFGISDIRIEKTPLGMKIVIKTPKPGAIITRANQILRE 63 Query: 87 LRKVVADIAGVPA-QINIAEVRKPELDAKLVADSITSQLERR--VMFRRAMKRAVQNAMR 143 K + + + +I + + P LD +VADSI ++ + + ++ +A+ + M Sbjct: 64 SSKELGEYFNQESPRIEVEGSQDPNLDPAIVADSIAFKIAKYGPMKYKVVAHKAMDSIMS 123 Query: 144 LGAKGIKVEVSG 155 GA+G+++E+ G Sbjct: 124 AGARGVEIEIGG 135 >UniRef50_P48153 40S ribosomal protein S3 n=10 Tax=Eukaryota RepID=RS3_MANSE Length = 243 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 10/178 (5%) Query: 34 DSDFK--VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVV 91 D FK + ++LT+ELA+ S + + + I R V+G+KG + +L VV Sbjct: 15 DGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVV 74 Query: 92 ADIAGVPAQ---INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKG 148 +P Q + +V L A A+S+ +L + RRA ++ M GA+G Sbjct: 75 QKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 134 Query: 149 IKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDY-NTSEAHTTY--GVIGVKVWIF 203 +V VSG+L G A++ + +G + +H+ DY NT+ H GV+G+KV I Sbjct: 135 CEVVVSGKLRGQR-AKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIM 190 >UniRef50_B9WLS6 Ribosomal protein, small subunit, putative n=5 Tax=Saccharomycetales RepID=B9WLS6_CANDC Length = 254 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 8/173 (4%) Query: 38 KVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRK-VVADIAG 96 ++ ++ T+ELA+ + + + + + V + + V+G++G + +L +V Sbjct: 21 ELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRRIHELTSLIVKRFKL 80 Query: 97 VPAQINIAEVRKPE--LDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 P I I R E L A + A+++ ++L + RRA ++ AM GAKG++V +S Sbjct: 81 SPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVIS 140 Query: 155 GRLGGAEIARTEWYREGRVPLHT---LRADIDYNTSEAHTTYGVIGVKVWIFK 204 G+L A A+++ Y +G + +H+ R ID GV+G+KV I K Sbjct: 141 GKLRAAR-AKSQKYADGFM-IHSGQPTRDFIDIAIRHVLMRQGVLGIKVKIMK 191 >UniRef50_Q9MG96 Ribosomal protein S3 n=1 Tax=Chrysodidymus synuroideus RepID=Q9MG96_9STRA Length = 265 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 38/66 (57%) Query: 137 AVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVI 196 ++N GIK+ ++G+L G + T +G +P TL+ ID+N ++ T YGV Sbjct: 196 LIKNKFSNNILGIKIVLNGKLRGKVRSNTIIISKGSIPNQTLKKRIDFNQADIFTKYGVY 255 Query: 197 GVKVWI 202 G+K+W+ Sbjct: 256 GIKIWV 261 >UniRef50_Q3S286 Ribosomal protein S3 n=1 Tax=Thalassiosira pseudonana RepID=Q3S286_THAPS Length = 308 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 12/114 (10%) Query: 101 INIAEVRKPELDAKLVADSI-TSQLERRVM--------FRRAMKRAVQ---NAMRLGAKG 148 +NI + + +L A+ ++D +QL+ M F +K+ ++ NA G G Sbjct: 192 VNITKRKSAKLLAEFISDQFKINQLKTDQMAISRKDNYFLGFLKQTIKLLINAEVSGLTG 251 Query: 149 IKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 IK+ + GR A A++ + G+ L + + IDY S A+T G GVKVW+ Sbjct: 252 IKIVIKGRFNRAPRAKSVTIQFGKFSLQSFDSKIDYFQSTAYTINGTFGVKVWM 305 >UniRef50_D2DXE7 Ribosomal protein S3 (Fragment) n=1 Tax=Welwitschia mirabilis RepID=D2DXE7_WELMI Length = 744 Score = 48.1 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 14/104 (13%) Query: 113 AKLVADSITSQLERRVMFR----------RAMKRAVQNAMRLGAKGIKVEVSGRLGGAEI 162 A L+A I++QL R R R + V + + +GI++ SGRL GAEI Sbjct: 628 ASLIAQDISNQLRGRNRTRSFRSLVSYLVRFVPVRVNPSASVRVRGIRICCSGRLKGAEI 687 Query: 163 ARTEW--YREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 A TE Y + P R + ID+ + T YG+ GVKVWI Sbjct: 688 AYTECGEYGKTSAPSSIYRREGVIDHASVHVSTRYGIYGVKVWI 731 >UniRef50_A8J9X5 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J9X5_CHLRE Length = 1125 Score = 47.0 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 2/91 (2%) Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLG-GAEIARTEWYREG 171 A VA+++ S + R + A +A +L A ++VEV+GR+G A++A T+ + G Sbjct: 162 ATYVAEALESGSAWGRIERFFLAAAEADAGKLVA-AVRVEVAGRIGRKADMAATKSWAWG 220 Query: 172 RVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 + L +L + +DY T+ A+T GV+G+KVWI Sbjct: 221 DLRLASLTSKLDYGTAAANTRMGVLGIKVWI 251 >UniRef50_P23396 40S ribosomal protein S3 n=252 Tax=root RepID=RS3_HUMAN Length = 243 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%) Query: 34 DSDFK--VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVV 91 D FK + ++LT+ELA+ S + + + I R V+G+KG + +L VV Sbjct: 14 DGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVV 73 Query: 92 ADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKG 148 G P ++ +V L A A+S+ +L + RRA ++ M GAKG Sbjct: 74 QKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133 Query: 149 IKVEVSGRLGGAEIARTEWYREGRVPLHT---LRADIDYNTSEAHTTYGVIGVKVWIF 203 +V VSG+L G A++ + +G + +H+ + +D GV+G+KV I Sbjct: 134 CEVVVSGKLRGQR-AKSMKFVDGLM-IHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 >UniRef50_Q9TAJ2 Ribosomal protein S3 n=1 Tax=Cafeteria roenbergensis RepID=Q9TAJ2_CAFRO Length = 713 Score = 47.0 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Query: 122 SQLERRVMFRRAMKRAVQN--AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 S+ +R++ F R + R + N + KG++++ GR ++ + G +PL Sbjct: 608 SKTKRQIPFIRFLMRLITNLAGSVVRVKGLRIQFKGRFDRWNRTKSLVFTSGNIPLQRKD 667 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKG 205 ADI+Y +S GV G+++W++ G Sbjct: 668 ADIEYGSSHGLVKKGVYGIRLWVWYG 693 >UniRef50_A9BL58 Rps3 n=1 Tax=Cryptophyta RepID=A9BL58_9CRYP Length = 246 Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 11/188 (5%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA---DIA 95 + + L++EL+ + + I + + + + ++G +G ++++ ++ Sbjct: 50 LNELLSRELSDEGYTNVEIRKAPLKTEIILKMTQTHSILGSRGRRIKEINGLIKKRFQFD 109 Query: 96 GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSG 155 +I + ++ L A A+S+ +L R ++ RRA +++ M GAKG + VSG Sbjct: 110 EKSLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRRACYSTLKSTMESGAKGCIISVSG 169 Query: 156 RLGGAEIARTEWYREGRVPLHTLRADIDY---NTSEAHTTYGVIGVKVWIFKGEILGGMA 212 +L A+ A+T + +G + +H+ + DY T GVIG+K+ I + A Sbjct: 170 KL-RAQRAKTMKFIDGYI-IHSGKPVEDYIEKATRHCFLRQGVIGIKISIM---LPWDPA 224 Query: 213 AVEQPEKP 220 V P+KP Sbjct: 225 GVRGPKKP 232 >UniRef50_Q25809 Rps3 protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q25809_PLAF7 Length = 214 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 32/60 (53%) Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 KG+K++ SGR + + E Y G + L TL +I Y +T YG++ +K+W+ Sbjct: 153 NFNIKGLKIKFSGRFKNSLKTKIEIYIYGIISLSTLNNNIKYINDIINTKYGILSIKIWL 212 >UniRef50_Q9ZZN7 30S ribosomal protein S3 n=1 Tax=Cyanidioschyzon merolae RepID=Q9ZZN7_CYAME Length = 282 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%) Query: 147 KGIKVEVSGRLGGAE--IARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 +G+K+ + GRL G + I+ E G VPL T +I Y+T + T YGV G++VWIF Sbjct: 222 RGLKIIIRGRLHGLQNQISTVESIEIGTVPLQTKEHEILYSTRDFVTKYGVYGIQVWIF 280 >UniRef50_Q9G916 Ribosomal protein S3 n=1 Tax=Ochromonas danica RepID=Q9G916_OCHDN Length = 250 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 35/56 (62%) Query: 147 KGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 KG+K+ ++GRL G A+T + G++PL + + I + + +T YG G+K+W+ Sbjct: 192 KGVKLIIAGRLKGKTRAKTSKFILGKIPLSSEKEKIKASQTHIYTVYGCFGLKLWV 247 >UniRef50_Q5ILK9 Ribosomal protein S3 n=2 Tax=Polysphondylium pallidum RepID=Q5ILK9_POLPA Length = 660 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 11/120 (9%) Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMR-----LGAKGIKVEVSGRLGGAEIARTEWYREG 171 AD + ++ R + +++K + N +R + G KV+ +GRL + +AR + ++G Sbjct: 532 ADMLLKRILRTMDITKSLKWLILNMLRKLEKSMSFFGFKVKFAGRLSASIMARVDIIQKG 591 Query: 172 RVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKG 231 + + + IDY YG G+KVW+ + + V P K K K Sbjct: 592 LISTNNMNVYIDYAKDSIVLKYGKCGIKVWLVRNLL------VYMPYKYVYSYKFNNNKN 645 >UniRef50_Q7YN77 Ribosomal protein S3 n=1 Tax=Eimeria tenella RepID=Q7YN77_EIMTE Length = 203 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 33/54 (61%) Query: 147 KGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKV 200 KG K +SG++ G+++A+ E ++ L ++ YN+ + T YG++G+K+ Sbjct: 150 KGFKCIISGKINGSQMAKIETFKFNESSLQNKILNVKYNSIDVITKYGLLGIKI 203 >UniRef50_B9SHX4 Chloroplast 30S ribosomal protein S7, putative n=1 Tax=Ricinus communis RepID=B9SHX4_RICCO Length = 89 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 28/40 (70%) Query: 134 MKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 M++A++ KGI+V+++GRL G EIAR EW R+GR Sbjct: 1 MRKAIELTEHADTKGIQVQIAGRLDGKEIARVEWIRKGRT 40 >UniRef50_Q2TUB8 Ribosomal protein S3 n=1 Tax=Dictyota dichotoma RepID=Q2TUB8_DICDH Length = 277 Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%) Query: 152 EVSGRLGGAEIARTE-W-YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 ++ GR G R++ W Y+ G +PL +RA I Y + +A T G +G+K WI+ Sbjct: 222 QLKGRFGYKPKGRSKIWKYQLGSLPLSQIRAVIQYRSQQAQTKLGSVGIKTWIY 275 >UniRef50_A7AXG9 Rps3 n=1 Tax=Babesia bovis RepID=A7AXG9_BABBO Length = 237 Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 143 RLGAKGIKVEVSGRLG-GAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW 201 R+ GIKV+ SG G E RT Y +G V + +++ +I+Y S +T G IG+K W Sbjct: 175 RISIHGIKVKYSGCTHKGGEKKRTFAYSKGDVSICSVKENIEYINSSINTYKGTIGIKCW 234 Query: 202 I 202 + Sbjct: 235 L 235 >UniRef50_C0QKZ3 MutL n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKZ3_DESAH Length = 638 Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 5/108 (4%) Query: 112 DAKLVADSITSQLERRVMFRR---AMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWY 168 D +++ D +T+++ + R +K V+NA+ GA I E+ GG ++ R Sbjct: 3 DIRILPDILTNKIAAGEVVERPVSVVKELVENALDSGATRIVAEI--ERGGRDLIRISDN 60 Query: 169 REGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQ 216 G P + L A Y TS+ T + +K + F+GE L MAAV + Sbjct: 61 GSGMSPDNALLAIERYATSKIFTDEDLFAIKTFGFRGEALPSMAAVSK 108 >UniRef50_Q22AV9 KH domain containing protein n=3 Tax=Oligohymenophorea RepID=Q22AV9_TETTH Length = 243 Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 8/182 (4%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+F + + ++ + +K L A + I + R + I +P VIG +G+ ++ Sbjct: 12 KKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGKKHKE 71 Query: 87 LRKVVADIAGVPA-QINI-AE-VRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR 143 L + + G QI I AE ++ L A +++ +L + V R A +++ ++ Sbjct: 72 LTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQ 131 Query: 144 LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDY-NTSEAHTTY--GVIGVKV 200 GAKG ++ +SG+L + A+T +++G + + T + DY + + H + G++GVKV Sbjct: 132 DGAKGCEIIISGKL-KQQRAKTMKFKQGYM-ICTGQPKNDYIDVAVRHVFFKQGIMGVKV 189 Query: 201 WI 202 I Sbjct: 190 KI 191 >UniRef50_Q9G8Q4 Ribosomal protein S3 n=1 Tax=Naegleria gruberi RepID=Q9G8Q4_NAEGR Length = 523 Score = 40.4 bits (93), Expect = 0.042, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Query: 148 GIKVEVSG--------RLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVK 199 GI++E +G RL + G++P ++ ADIDY S A T G IG+K Sbjct: 444 GIRIECNGPPKRGRQARLVAYHQIVKNYKLFGKMPNKSVLADIDYYQSFARTKQGSIGIK 503 Query: 200 VWIF 203 VWIF Sbjct: 504 VWIF 507 >UniRef50_UPI000186EDB7 predicted protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186EDB7 Length = 1835 Score = 40.0 bits (92), Expect = 0.068, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 22/149 (14%) Query: 47 LAKASVSRIVIERPAKS--IRVTIHTAR----PGIVIGKKGEDVEKLRKVVADIAGVPAQ 100 LA++SVSR++I KS I+ ++ T + P + +KGE V ++ + + A Sbjct: 247 LARSSVSRVIISGSLKSYTIQSSVTTNKVILSPEVYNNQKGEIVSRVNLTLTSVHS--AT 304 Query: 101 INIAEVRKPELDAKLVAD---------SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKV 151 N+ + P+ KLV D S+ ++R+M + R + N +R G + Sbjct: 305 GNVPTTQNPQSLKKLVYDYNSPWTTDAEARSKWDKRIMTKSGKMRGIDNIIRSGRSIVTN 364 Query: 152 EVS---GRLGGAEIARTEWYREGRVPLHT 177 S G LG EW++ + PL T Sbjct: 365 TASGLHGHLGTGFDGTEEWHQ--KTPLIT 391 >UniRef50_Q2TUF7 Ribosomal protein S3 n=18 Tax=Phaeophyceae RepID=Q2TUF7_9PHAE Length = 286 Score = 39.7 bits (91), Expect = 0.090, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 147 KGIKVEVSGRLGGAEIARTE-W-YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 +G+K+++ GR R++ W Y+ G++PL + I + T YG +G+KVWI Sbjct: 214 QGVKIQIKGRFTHKAKGRSKVWKYQMGQMPLSQISMPIQAEYMQTQTGYGSVGLKVWICN 273 Query: 205 GE 206 E Sbjct: 274 WE 275 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q12GW5 30S ribosomal protein S3 n=397 Tax=Bacteria RepI... 305 8e-82 UniRef50_B5YDU9 30S ribosomal protein S3 n=194 Tax=Bacteria RepI... 299 4e-80 UniRef50_B2T745 30S ribosomal protein S3 n=167 Tax=cellular orga... 297 2e-79 UniRef50_Q0RRR5 30S ribosomal protein S3 n=406 Tax=cellular orga... 292 8e-78 UniRef50_Q01W98 30S ribosomal protein S3 n=172 Tax=Bacteria RepI... 289 7e-77 UniRef50_C9KPB3 Ribosomal protein S3 n=1 Tax=Mitsuokella multaci... 286 4e-76 UniRef50_C7M2X8 Ribosomal protein S3 n=2 Tax=Bacteria RepID=C7M2... 280 3e-74 UniRef50_C6XHI5 30S ribosomal protein S3 n=1 Tax=Candidatus Libe... 279 6e-74 UniRef50_Q1IX78 30S ribosomal protein S3 n=2 Tax=Deinococcus Rep... 276 6e-73 UniRef50_UPI0001C30EBD ribosomal protein S3 n=1 Tax=Conexibacter... 271 1e-71 UniRef50_Q3KLH5 30S ribosomal protein S3 n=13 Tax=Chlamydiaceae ... 271 2e-71 UniRef50_A6LEI5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=... 269 4e-71 UniRef50_A8PNP8 Ribosomal protein S3 n=2 Tax=Gammaproteobacteria... 269 5e-71 UniRef50_C1CXG0 30S ribosomal protein S3 n=61 Tax=Bacteria RepID... 269 5e-71 UniRef50_B4CUY0 Ribosomal protein S3 n=1 Tax=Chthoniobacter flav... 267 2e-70 UniRef50_A9NED9 30S ribosomal protein S3 n=175 Tax=Bacteria RepI... 266 3e-70 UniRef50_D2QSG4 Ribosomal protein S3 n=15 Tax=Bacteria RepID=D2Q... 266 3e-70 UniRef50_Q11QB8 30S ribosomal protein S3 n=26 Tax=Bacteria RepID... 265 9e-70 UniRef50_B2S2E2 30S ribosomal protein S3 n=2 Tax=Treponema palli... 264 2e-69 UniRef50_Q2GED3 30S ribosomal protein S3 n=2 Tax=Neorickettsia R... 264 2e-69 UniRef50_B4U750 30S ribosomal protein S3 n=6 Tax=Bacteria RepID=... 264 2e-69 UniRef50_C1KRC6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 263 4e-69 UniRef50_Q3APH9 30S ribosomal protein S3 n=8 Tax=Chlorobium/Pelo... 262 7e-69 UniRef50_Q04G79 30S ribosomal protein S3 n=3 Tax=cellular organi... 262 8e-69 UniRef50_C7H0X5 Ribosomal protein S3 n=8 Tax=Bacteria RepID=C7H0... 262 9e-69 UniRef50_Q3ZZL8 30S ribosomal protein S3 n=38 Tax=Bacteria RepID... 261 2e-68 UniRef50_C1XH61 SSU ribosomal protein S3P n=2 Tax=Meiothermus Re... 259 5e-68 UniRef50_B0SA41 30S ribosomal protein S3 n=6 Tax=Leptospira RepI... 256 3e-67 UniRef50_B3PMP1 30S ribosomal protein S3 n=4 Tax=Mycoplasma RepI... 255 6e-67 UniRef50_B2KEL5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=... 255 9e-67 UniRef50_A9FGJ7 30S ribosomal protein S3 n=1 Tax=Sorangium cellu... 254 1e-66 UniRef50_Q7UN14 30S ribosomal protein S3 n=5 Tax=Planctomycetace... 253 4e-66 UniRef50_C7BEM5 30S ribosomal protein S3, chloroplastic n=2 Tax=... 250 2e-65 UniRef50_Q8YPI5 30S ribosomal protein S3 n=228 Tax=cellular orga... 249 4e-65 UniRef50_C0JWV6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 245 7e-64 UniRef50_D2ISA0 Ribosomal protein S3 n=1 Tax=Cryptomonas paramec... 245 1e-63 UniRef50_P19169 30S ribosomal protein S3, chloroplastic n=1 Tax=... 244 2e-63 UniRef50_B7J249 30S ribosomal protein S3 n=23 Tax=Bacteria RepID... 243 4e-63 UniRef50_Q20F10 30S ribosomal protein S3, chloroplastic n=2 Tax=... 242 7e-63 UniRef50_P41205 30S ribosomal protein S3 n=2 Tax=Mycoplasma RepI... 241 1e-62 UniRef50_P56798 30S ribosomal protein S3, chloroplastic n=103 Ta... 240 3e-62 UniRef50_Q32RN6 30S ribosomal protein S3, chloroplastic n=32 Tax... 236 4e-61 UniRef50_B3CT11 30S ribosomal protein S3 n=2 Tax=Orientia tsutsu... 235 1e-60 UniRef50_C0JWQ0 30S ribosomal protein S3, chloroplastic n=1 Tax=... 234 2e-60 UniRef50_Q8M9V0 30S ribosomal protein S3, chloroplastic n=1 Tax=... 231 1e-59 UniRef50_B1AIM6 30S ribosomal protein S3 n=101 Tax=Bacteria RepI... 230 2e-59 UniRef50_D0EVS4 30S ribosomal protein S3, chloroplastic n=1 Tax=... 224 1e-57 UniRef50_P56365 30S ribosomal protein S3, chloroplastic n=3 Tax=... 223 4e-57 UniRef50_Q601K8 30S ribosomal protein S3 n=6 Tax=Mycoplasma RepI... 219 5e-56 UniRef50_D1J746 30S ribosomal protein S3, chloroplastic n=2 Tax=... 218 2e-55 UniRef50_P0C485 30S ribosomal protein S3, chloroplastic n=72 Tax... 215 1e-54 UniRef50_B7T3V4 30S ribosomal protein S3, chloroplastic n=1 Tax=... 209 7e-53 UniRef50_Q06J59 30S ribosomal protein S3, chloroplastic n=1 Tax=... 195 8e-49 UniRef50_Q2WGE8 30S ribosomal protein S3, chloroplastic (Fragmen... 195 1e-48 UniRef50_C0QW02 30S ribosomal protein S3 n=3 Tax=Brachyspira Rep... 194 2e-48 UniRef50_B2Y1Z8 30S ribosomal protein S3, chloroplastic n=1 Tax=... 192 1e-47 UniRef50_B7T425 30S ribosomal protein S3, chloroplastic n=4 Tax=... 191 1e-47 UniRef50_P58133 Plastid 30S ribosomal protein S3 n=1 Tax=Euglena... 190 3e-47 UniRef50_UPI0001B44297 30S ribosomal protein S3 n=1 Tax=Listeria... 183 3e-45 UniRef50_Q46GA1 30S ribosomal protein S3P n=8 Tax=Euryarchaeota ... 183 4e-45 UniRef50_D2LQE8 Ribosomal protein S3 n=1 Tax=Aciduliprofundum bo... 178 1e-43 UniRef50_Q18GF5 30S ribosomal protein S3P n=7 Tax=Euryarchaeota ... 177 2e-43 UniRef50_C7NV53 Ribosomal protein S3 n=7 Tax=Archaea RepID=C7NV5... 177 3e-43 UniRef50_C6UN14 Putative 30S ribosomal subunit protein S3 n=1 Ta... 177 4e-43 UniRef50_B7ZIJ3 30S ribosomal protein S3, chloroplastic n=1 Tax=... 176 6e-43 UniRef50_A7I5P5 30S ribosomal protein S3P n=2 Tax=Methanomicrobi... 175 2e-42 UniRef50_A0B9W4 30S ribosomal protein S3P n=3 Tax=Archaea RepID=... 173 5e-42 UniRef50_UPI0001AEC3A6 30S ribosomal protein S3 n=1 Tax=Alteromo... 168 1e-40 UniRef50_C5A280 30S ribosomal protein S3P n=8 Tax=Thermococcacea... 168 2e-40 UniRef50_A4FWB6 30S ribosomal protein S3P n=11 Tax=Methanococcal... 167 3e-40 UniRef50_O28360 30S ribosomal protein S3P n=3 Tax=Euryarchaeota ... 167 3e-40 UniRef50_B4S097 30S ribosomal protein S3 n=2 Tax=Alteromonas mac... 166 5e-40 UniRef50_O26116 30S ribosomal protein S3P n=6 Tax=Euryarchaeota ... 166 5e-40 UniRef50_B3V6P6 Ribosomal protein S3 n=1 Tax=uncultured marine g... 166 5e-40 UniRef50_Q9G889 Ribosomal protein S3 n=1 Tax=Malawimonas jakobif... 162 8e-39 UniRef50_Q673S3 Ribosomal protein S3 n=4 Tax=environmental sampl... 161 2e-38 UniRef50_A2BMC5 30S ribosomal protein S3P n=10 Tax=Thermoprotei ... 161 2e-38 UniRef50_Q9YF78 30S ribosomal protein S3P n=1 Tax=Aeropyrum pern... 161 2e-38 UniRef50_A3DNB3 30S ribosomal protein S3P n=2 Tax=Desulfurococca... 159 7e-38 UniRef50_A4YCX2 30S ribosomal protein S3P n=3 Tax=Sulfolobaceae ... 158 1e-37 UniRef50_B3V6F1 Ribosomal protein S3 n=2 Tax=environmental sampl... 157 3e-37 UniRef50_A8AA20 30S ribosomal protein S3P n=1 Tax=Ignicoccus hos... 156 6e-37 UniRef50_Q9HIR5 30S ribosomal protein S3P n=3 Tax=Thermoplasmata... 156 8e-37 UniRef50_A1RXG6 30S ribosomal protein S3P n=1 Tax=Thermofilum pe... 154 2e-36 UniRef50_B2X260 30S ribosomal protein S3, chloroplastic n=1 Tax=... 153 4e-36 UniRef50_Q8W9Q9 Ribosomal protein S3 n=1 Tax=Mesostigma viride R... 152 8e-36 UniRef50_B3T598 Putative ribosomal protein S3, C-terminal domain... 152 8e-36 UniRef50_Q1RU61 Bacterial ribosomal protein S3 n=1 Tax=Medicago ... 151 2e-35 UniRef50_Q05FJ0 30S ribosomal protein S3 n=2 Tax=Candidatus Cars... 149 9e-35 UniRef50_Q85UK5 30S ribosomal protein S3, chloroplastic (Fragmen... 148 1e-34 UniRef50_UPI000038E231 30S ribosomal protein S3P n=1 Tax=Ferropl... 147 2e-34 UniRef50_Q06SI4 30S ribosomal protein S3, chloroplastic n=112 Ta... 144 2e-33 UniRef50_Q5QJE0 Ribosomal protein S3 n=20 Tax=Spermatophyta RepI... 143 5e-33 UniRef50_D2DX66 Ribosomal protein S3 n=2 Tax=Taxaceae RepID=D2DX... 141 2e-32 UniRef50_A6YEA6 Ribosomal protein S3 n=1 Tax=Chlorokybus atmophy... 141 2e-32 UniRef50_B1L650 Ribosomal protein S3 n=1 Tax=Candidatus Korarcha... 141 2e-32 UniRef50_P48153 40S ribosomal protein S3 n=10 Tax=Eukaryota RepI... 140 4e-32 UniRef50_P23396 40S ribosomal protein S3 n=252 Tax=root RepID=RS... 140 4e-32 UniRef50_D2DX72 Ribosomal protein S3 n=1 Tax=Cephalotaxus sinens... 139 6e-32 UniRef50_D2DX40 Ribosomal protein S3 n=4 Tax=Podocarpaceae RepID... 139 6e-32 UniRef50_Q1KVX7 30S ribosomal protein S3, chloroplastic n=3 Tax=... 139 6e-32 UniRef50_B2MWV7 Ribosomal protein S3 n=1 Tax=Hemiselmis andersen... 139 8e-32 UniRef50_P26865 Ribosomal protein S3, mitochondrial n=2 Tax=Marc... 137 2e-31 UniRef50_A8B8Z2 Ribosomal protein S3 n=2 Tax=Giardia intestinali... 137 3e-31 UniRef50_C0KT93 Ribosomal protein S3 (Fragment) n=50 Tax=Halimed... 137 3e-31 UniRef50_D2DWK6 Ribosomal protein S3 (Fragment) n=1 Tax=Gnetum m... 137 3e-31 UniRef50_Q1XG99 Ribosomal protein S3 n=1 Tax=Physcomitrella pate... 136 4e-31 UniRef50_D2DX63 Ribosomal protein S3 n=1 Tax=Sciadopitys vertici... 136 4e-31 UniRef50_A3MTL3 30S ribosomal protein S3P n=2 Tax=Thermoproteace... 136 5e-31 UniRef50_Q8TX35 30S ribosomal protein S3P n=1 Tax=Methanopyrus k... 136 6e-31 UniRef50_B2X1Z6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 135 1e-30 UniRef50_O21249 Ribosomal protein S3 n=1 Tax=Reclinomonas americ... 135 1e-30 UniRef50_C7DIC2 Ribosomal protein S3-domain protein n=1 Tax=Cand... 135 1e-30 UniRef50_D2DXC4 Ribosomal protein S3 n=9 Tax=Cupressaceae RepID=... 135 1e-30 UniRef50_Q7YAL0 Ribosomal protein S3 n=1 Tax=Chara vulgaris RepI... 135 2e-30 UniRef50_D2DX51 Ribosomal protein S3 n=19 Tax=Cupressaceae RepID... 134 2e-30 UniRef50_D0FY21 30S ribosomal protein S3, chloroplastic n=1 Tax=... 134 3e-30 UniRef50_A0RVX9 30S ribosomal protein S3P n=2 Tax=Thaumarchaeota... 133 4e-30 UniRef50_Q5PXB8 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda... 131 1e-29 UniRef50_Q08365 30S ribosomal protein S3, chloroplastic n=2 Tax=... 131 2e-29 UniRef50_D0VMX7 Ribosomal protein S3 n=1 Tax=Volvox carteri f. n... 131 2e-29 UniRef50_Q6E789 Ribosomal protein S3 n=1 Tax=Saprolegnia ferax R... 130 4e-29 UniRef50_P46307 30S ribosomal protein S3, chloroplastic n=3 Tax=... 130 4e-29 UniRef50_Q95749 Ribosomal protein S3, mitochondrial n=5 Tax=Bras... 129 7e-29 UniRef50_A4WIY8 30S ribosomal protein S3P n=4 Tax=Thermoproteace... 129 7e-29 UniRef50_Q0P3H9 Mitochondrion, complete genome n=1 Tax=Ostreococ... 128 1e-28 UniRef50_Q9G8W8 Ribosomal protein S3 n=1 Tax=Rhodomonas salina R... 127 2e-28 UniRef50_A9BL58 Rps3 n=1 Tax=Cryptophyta RepID=A9BL58_9CRYP 127 3e-28 UniRef50_A6YGC6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 125 8e-28 UniRef50_B9TAP3 60S ribosomal protein L16, putative n=2 Tax=Sper... 125 1e-27 UniRef50_Q8SQM3 40S ribosomal protein S3 n=2 Tax=Apansporoblasti... 125 1e-27 UniRef50_Q8M1G0 Ribosomal protein S3 n=1 Tax=Chaetosphaeridium g... 125 1e-27 UniRef50_Q5PSC9 Ribosomal protein S3 (Fragment) n=20 Tax=Halimed... 124 2e-27 UniRef50_B9WLS6 Ribosomal protein, small subunit, putative n=5 T... 124 3e-27 UniRef50_C6FG16 Ribosomal protein S3 n=1 Tax=Isoetes engelmannii... 123 6e-27 UniRef50_Q5PX34 Ribosomal protein S3 (Fragment) n=73 Tax=Halimed... 122 9e-27 UniRef50_Q74MZ4 30S ribosomal protein S3P n=1 Tax=Nanoarchaeum e... 120 3e-26 UniRef50_Q2EEW0 Plastid 30S ribosomal protein S3 n=1 Tax=Helicos... 119 8e-26 UniRef50_D2DX78 Ribosomal protein S3 n=2 Tax=Araucariaceae RepID... 119 9e-26 UniRef50_A4KYC4 Ribosomal protein S3 (Fragment) n=3 Tax=Chrysoba... 115 1e-24 UniRef50_A4ZHA7 Ribosomal protein S3 n=8 Tax=Phytophthora RepID=... 115 1e-24 UniRef50_C1KRI4 Ribosomal protein S3 n=1 Tax=Micromonas sp. RCC2... 111 1e-23 UniRef50_P46740 Ribosomal protein S3, mitochondrial n=1 Tax=Prot... 111 1e-23 UniRef50_Q9TCB0 Ribosomal protein S3 n=1 Tax=Nephroselmis olivac... 111 2e-23 UniRef50_C1KR88 Ribosomal protein S3 n=1 Tax=Micromonas pusilla ... 108 2e-22 UniRef50_D2EEG8 KH type 2 domain protein n=1 Tax=Candidatus Parv... 106 8e-22 UniRef50_D2DXE7 Ribosomal protein S3 (Fragment) n=1 Tax=Welwitsc... 104 3e-21 UniRef50_B9GND7 Predicted protein n=2 Tax=rosids RepID=B9GND7_POPTR 92 1e-17 UniRef50_Q9G4C6 Ribosomal protein S3 n=1 Tax=Thraustochytrium au... 92 2e-17 UniRef50_Q9MTE3 Ribosomal protein S3 n=1 Tax=Toxoplasma gondii R... 87 3e-16 UniRef50_UPI0001855078 30S ribosomal protein S3 n=1 Tax=Helicoba... 86 8e-16 UniRef50_UPI00016B245A 30S ribosomal protein S3 n=1 Tax=candidat... 84 4e-15 UniRef50_A8J9X5 Predicted protein n=1 Tax=Chlamydomonas reinhard... 81 3e-14 UniRef50_Q3S286 Ribosomal protein S3 n=1 Tax=Thalassiosira pseud... 80 7e-14 UniRef50_C1QG67 SSU ribosomal protein S3P n=1 Tax=Brachyspira mu... 78 3e-13 UniRef50_Q6UVR6 Ribosomal protein S3 n=1 Tax=Pseudendoclonium ak... 75 1e-12 UniRef50_Q9TAJ2 Ribosomal protein S3 n=1 Tax=Cafeteria roenberge... 72 1e-11 UniRef50_Q9MG96 Ribosomal protein S3 n=1 Tax=Chrysodidymus synur... 72 1e-11 UniRef50_Q9ZZN7 30S ribosomal protein S3 n=1 Tax=Cyanidioschyzon... 71 4e-11 UniRef50_Q25809 Rps3 protein n=1 Tax=Plasmodium falciparum 3D7 R... 68 2e-10 UniRef50_Q9G916 Ribosomal protein S3 n=1 Tax=Ochromonas danica R... 60 7e-08 Sequences not found previously or not previously below threshold: UniRef50_Q22AV9 KH domain containing protein n=3 Tax=Oligohymeno... 120 5e-26 UniRef50_Q38EW1 40S ribosomal protein S3, putative n=2 Tax=Trypa... 117 2e-25 UniRef50_A2DIM3 Ribosomal protein S3, putative n=2 Tax=Trichomon... 98 2e-19 UniRef50_C5KMP5 40S ribosomal protein S3, putative n=2 Tax=Perki... 94 4e-18 UniRef50_Q9NQS8 Ribosomal protein S3 (Fragment) n=70 Tax=Eukaryo... 90 4e-17 UniRef50_P48938 Ribosomal protein S3, mitochondrial n=1 Tax=Chon... 86 8e-16 UniRef50_B7XK37 SSU ribosomal protein S3P n=1 Tax=Enterocytozoon... 83 1e-14 UniRef50_O99993 Ribosomal protein S3 n=1 Tax=Porphyra purpurea R... 82 1e-14 UniRef50_Q7YN77 Ribosomal protein S3 n=1 Tax=Eimeria tenella Rep... 74 4e-12 UniRef50_Q9AIN3 Ribosomal protein S3 (Fragment) n=2 Tax=Candidat... 71 3e-11 UniRef50_Q5EM32 Ribosomal protein S3 n=1 Tax=Mortierella vertici... 69 2e-10 UniRef50_P46754 Ribosomal protein S3, mitochondrial n=1 Tax=Acan... 66 7e-10 UniRef50_Q6VEE5 Ribosomal protein S3 n=1 Tax=Emiliania huxleyi R... 65 1e-09 UniRef50_Q01BA3 Putative ribosomal protein (ISS) n=1 Tax=Ostreoc... 65 2e-09 UniRef50_UPI00017EFAFD PREDICTED: hypothetical protein n=1 Tax=S... 65 3e-09 UniRef50_Q5ILK9 Ribosomal protein S3 n=2 Tax=Polysphondylium pal... 63 1e-08 UniRef50_UPI000155D30A PREDICTED: hypothetical protein, partial ... 59 1e-07 UniRef50_Q9G8Q4 Ribosomal protein S3 n=1 Tax=Naegleria gruberi R... 58 2e-07 UniRef50_UPI00005A35DE PREDICTED: similar to 40S ribosomal prote... 57 4e-07 UniRef50_Q23891 ORF1740 n=1 Tax=Dictyostelium discoideum RepID=Q... 57 4e-07 UniRef50_D1HDP1 Whole genome shotgun sequence of line PN40024, s... 56 8e-07 UniRef50_C0KT85 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda... 56 1e-06 UniRef50_Q2TUF7 Ribosomal protein S3 n=18 Tax=Phaeophyceae RepID... 55 2e-06 UniRef50_UPI0001859BF7 MRP3 n=1 Tax=Cryptococcus neoformans var.... 55 2e-06 UniRef50_Q3T4C4 Ribosomal protein S3 n=1 Tax=Smittium culisetae ... 53 7e-06 UniRef50_Q8LNX7 Putative ribosomal protein S3 (Fragment) n=1 Tax... 52 2e-05 UniRef50_B2VQ35 Ribosomal protein S3 n=3 Tax=Dictyostelium citri... 51 2e-05 UniRef50_B9SHX4 Chloroplast 30S ribosomal protein S7, putative n... 51 2e-05 UniRef50_D1HRG5 Whole genome shotgun sequence of line PN40024, s... 51 3e-05 UniRef50_Q2TUB8 Ribosomal protein S3 n=1 Tax=Dictyota dichotoma ... 51 3e-05 UniRef50_Q33766 Ribosomal protein S3 n=2 Tax=Blastocladiaceae Re... 50 5e-05 UniRef50_B2XX96 Ribosomal protein S3 n=1 Tax=Dictyostelium fasci... 48 2e-04 UniRef50_Q0H8Z0 Ribosomal protein S3, mitochondrial n=1 Tax=Usti... 48 2e-04 UniRef50_Q4MYB8 Ribosomal protein S3, putative n=1 Tax=Theileria... 48 2e-04 UniRef50_Q3LWD3 Ribosomal protein S3 n=1 Tax=Bigelowiella natans... 48 3e-04 UniRef50_A4XIG3 PpiC-type peptidyl-prolyl cis-trans isomerase n=... 47 5e-04 UniRef50_B5A4G6 40S ribosomal protein S3 n=1 Tax=Gymnochlora ste... 47 5e-04 UniRef50_A7AXG9 Rps3 n=1 Tax=Babesia bovis RepID=A7AXG9_BABBO 46 7e-04 UniRef50_Q9MF63 Orf246 protein n=1 Tax=Beta vulgaris subsp. vulg... 45 0.002 UniRef50_B0X7L7 40S ribosomal protein S3 n=1 Tax=Culex quinquefa... 45 0.002 UniRef50_Q0QIP7 Ribosomal protein S3 n=1 Tax=Oltmannsiellopsis v... 43 0.010 UniRef50_C5LNU7 Putative uncharacterized protein n=1 Tax=Perkins... 43 0.011 UniRef50_B2XX95 Mp26-like protein n=1 Tax=Dictyostelium fascicul... 41 0.022 UniRef50_Q8HIT3 Orf269 n=1 Tax=Monosiga brevicollis RepID=Q8HIT3... 41 0.028 UniRef50_B7CCI6 Putative uncharacterized protein n=2 Tax=Erysipe... 41 0.041 UniRef50_UPI00006CD8A3 hypothetical protein TTHERM_00522130 n=1 ... 41 0.045 >UniRef50_Q12GW5 30S ribosomal protein S3 n=397 Tax=Bacteria RepID=RS3_POLSJ Length = 301 Score = 305 bits (782), Expect = 8e-82, Method: Composition-based stats. Identities = 147/232 (63%), Positives = 180/232 (77%), Gaps = 2/232 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P G RL + + W S W+A+ ++FA L D KVR+YL +L A+VSR++IERP Sbjct: 1 MGQKINPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRVLIERP 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 AK+ R+TI +ARPG+VIGKKGED+E L+K ++ GVP +NI EVRKPE+DAKL+ADSI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELSRQLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 T QLE+R+MFRRAMKRA+QNAMRLGA GIK+ SGRL G EIAR EWYREGRVPLHTLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGR 232 DIDY TSEA TTYGVIGVKVW++KG+ LG K A P ++RK R Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGR--GESPGAKLDAAPSDEERKPR 230 >UniRef50_B5YDU9 30S ribosomal protein S3 n=194 Tax=Bacteria RepID=RS3_DICT6 Length = 245 Score = 299 bits (766), Expect = 4e-80, Method: Composition-based stats. Identities = 117/231 (50%), Positives = 159/231 (68%), Gaps = 3/231 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK HP G RLGI K W S W+A +++ L D+ +R YL K +A +S I IER Sbjct: 1 MGQKTHPYGFRLGITKDWKSHWYAERSDYSSLLHEDWAIRNYLKKNYYQAGISLIEIERK 60 Query: 61 A-KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 A + +TIHTARPG++IG+ G ++E +RK + + +N+ EV+ PELDA+LVA++ Sbjct: 61 AANRVDITIHTARPGMLIGRGGSEIENIRKNLIKLTNKNVFVNVQEVKNPELDAQLVAEN 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+E+R+ ++RAMK+A+ A+R GAKGIKV SGRL GAEIAR+EW+REGR+PL TL Sbjct: 121 IAMQIEKRINYKRAMKQAINRALRAGAKGIKVMCSGRLNGAEIARSEWFREGRIPLQTLT 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEI--LGGMAAVEQPEKPAAQPKKQQ 228 ADIDY +EA T GVIGVKVWI+KG++ L A E PEK + + + Sbjct: 181 ADIDYGFAEAFTISGVIGVKVWIYKGDVPELHKEAIQELPEKAVPKKIEDE 231 >UniRef50_B2T745 30S ribosomal protein S3 n=167 Tax=cellular organisms RepID=RS3_BURPP Length = 268 Score = 297 bits (761), Expect = 2e-79, Method: Composition-based stats. Identities = 142/233 (60%), Positives = 177/233 (75%), Gaps = 6/233 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G RL + + W S W+AN FA L D VR+YL K+L ASV R+VIERP Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 AK+ R+TI ++RPG+VIGKKGED+E L+ + GVP +NI E+RKPE DA+L+ADSI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 T QLERR+MFRRAMKRA+QNAMRLGA+GIK+ +GRL G EIARTEWYREGRVPLHTLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 DIDY TSEA TTYG+IGVKVW++KG+ LG + P + ++++ R+ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRN------DAPVVEEVAEEKRPRR 227 >UniRef50_Q0RRR5 30S ribosomal protein S3 n=406 Tax=cellular organisms RepID=RS3_FRAAA Length = 350 Score = 292 bits (747), Expect = 8e-78, Method: Composition-based stats. Identities = 115/218 (52%), Positives = 160/218 (73%), Gaps = 1/218 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P+G RLGI + S W+A+ K++ + D K+R+ +++ + +A +SR+ IER Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +RV IHTARPGIVIG++G + +++R + + G Q+NI EV+ PE+DA+LVA + Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL RV FRRAM++A+Q AM+ GAKGI+V+ SGRLGGAE++R+E+YREGRVPLHTLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE 218 DIDY EA T +G IGVKVWI+KG+I+ A E E Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDIVQSRAEREAQE 217 >UniRef50_Q01W98 30S ribosomal protein S3 n=172 Tax=Bacteria RepID=RS3_SOLUE Length = 344 Score = 289 bits (739), Expect = 7e-77, Method: Composition-based stats. Identities = 123/208 (59%), Positives = 157/208 (75%), Gaps = 1/208 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG KPW S WFA + +A L D +++ L + L A VS I ++RP Sbjct: 1 MGQKVHPYGFRLGFNKPWRSRWFA-KQGYAKLLQEDLELKAALRERLKSAGVSSIEVDRP 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +RVTI T+RPGI+IG+KG ++EKL++ +A I+I EV KPELDA+LV++SI Sbjct: 60 GNKLRVTIRTSRPGIIIGRKGAEIEKLKQDMAKKTKREVFIDIQEVHKPELDAQLVSESI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLE+RV FRRAM++AV +A+R G KGIKV VSGRL GAEIAR+EWY +G++PLHTLRA Sbjct: 120 ALQLEKRVAFRRAMRKAVDSALRFGCKGIKVRVSGRLNGAEIARSEWYLQGQLPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 DIDY +EAHTTYGVIG+K W++KGEIL Sbjct: 180 DIDYGFAEAHTTYGVIGIKAWLYKGEIL 207 >UniRef50_C9KPB3 Ribosomal protein S3 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPB3_9FIRM Length = 222 Score = 286 bits (732), Expect = 4e-76, Method: Composition-based stats. Identities = 128/219 (58%), Positives = 165/219 (75%), Gaps = 1/219 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P+GIRLGIVK W++ W+A+ K+FADNL D K+R YL L A VSRI ER Sbjct: 1 MGQKVNPHGIRLGIVKTWDAKWYAD-KDFADNLHEDIKIRDYLKNSLQAAGVSRIETERS 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +++TIHTA+PG+VIG+ G +E++++ + + INIAE+++P++DA LVA++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKNYTTKRVDINIAEIKQPDMDATLVAENI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLERR+ FRRAMK+AV MRLGAKGIK+ SGRLGGAEIAR E YREG +PLHTLRA Sbjct: 120 AQQLERRIAFRRAMKQAVGRTMRLGAKGIKIACSGRLGGAEIARKESYREGSIPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEK 219 DIDY T+EAHTTYG IG+KVWIFKGE+L + + Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPERKQAKTAAE 218 >UniRef50_C7M2X8 Ribosomal protein S3 n=2 Tax=Bacteria RepID=C7M2X8_ACIFD Length = 288 Score = 280 bits (716), Expect = 3e-74, Method: Composition-based stats. Identities = 126/221 (57%), Positives = 161/221 (72%), Gaps = 2/221 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG+ W S W+A+ K++ L D ++RQ+L +EL ASVSR+ IER Sbjct: 1 MGQKVHPYGFRLGVTTDWKSRWYAD-KDYQRWLIEDEQIRQWLQRELRTASVSRVDIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVAD-IAGVPAQINIAEVRKPELDAKLVADS 119 +RV IHTARPGIVIGKKG +VE+LR+ + A Q+N+ E+R+P+LDA +VA S Sbjct: 60 RDRVRVDIHTARPGIVIGKKGVEVERLRRELERRCAPARVQLNVEEIRQPDLDATIVAQS 119 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ RRV FRRAMKRA+Q AM+ GA+GI + SGRLGGAE+AR E +REGRVP HTLR Sbjct: 120 IADQISRRVSFRRAMKRAIQVAMKEGARGITAQCSGRLGGAEMARRETHREGRVPRHTLR 179 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKP 220 ADID+ EA TTYG IGVKVWI+KG+++ QP++P Sbjct: 180 ADIDFGLREARTTYGQIGVKVWIYKGDVVPYQTLTSQPQRP 220 >UniRef50_C6XHI5 30S ribosomal protein S3 n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHI5_LIBAP Length = 227 Score = 279 bits (713), Expect = 6e-74, Method: Composition-based stats. Identities = 112/225 (49%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWI-FKGEILGGMAAVEQPEKPAAQP 224 IDY T+ A T YG G+KV++ + E+ + + E + Sbjct: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 >UniRef50_Q1IX78 30S ribosomal protein S3 n=2 Tax=Deinococcus RepID=RS3_DEIGD Length = 248 Score = 276 bits (705), Expect = 6e-73, Method: Composition-based stats. Identities = 116/234 (49%), Positives = 157/234 (67%), Gaps = 6/234 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++PNG RLGI K WNS W+A K+++ L D K+R+ ++++LA A ++RI IER Sbjct: 1 MGNKINPNGFRLGITKGWNSRWYAGKKQYSQLLKEDEKIRKLVSQKLAAAGIARIEIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADS 119 + + V I A+PGIVIGK GE +++LR + + +N+AE+ P + A LVA Sbjct: 61 GQQVNVIISAAKPGIVIGKGGESIKQLRGEIERLVSAGTVAVNVAEIPNPNISAPLVALR 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ERR FRRAMK+A Q M GA+G+KV +SGRLGGAE ARTE EGRVPLHTLR Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 ADIDY T+ A TTYG +G+KV +F GE++GG + E A P+K + R+ Sbjct: 181 ADIDYGTARAETTYGSLGIKVLVFNGEVIGG-----KTETLARPPRKSDERRRE 229 >UniRef50_UPI0001C30EBD ribosomal protein S3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30EBD Length = 395 Score = 271 bits (693), Expect = 1e-71, Method: Composition-based stats. Identities = 123/228 (53%), Positives = 157/228 (68%), Gaps = 4/228 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP +R+G + W S WF+ K F+D L D +R ++ L+ A +S I I + Sbjct: 1 MGQKVHPESLRVGYIHDWKSNWFSE-KNFSDYLVEDEAIRNHIVGRLSHAGLSDITIRKN 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 A + V I+TARPGIVIGK G +V+ LR+ + I ++NI E+++PELDA+LVA SI Sbjct: 60 ANEVEVNINTARPGIVIGKSGSEVDALRRDLHRITNKQVKVNILEIKRPELDARLVAQSI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL+ RV FRRAMKRA+ +AMR GAKG+KV+VSGRLGGAE+ARTE Y +GRVPLHTLRA Sbjct: 120 AEQLQNRVAFRRAMKRALTSAMRSGAKGVKVQVSGRLGGAEMARTEGYSDGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILG---GMAAVEQPEKPAAQPK 225 DIDY EA TT+G IGVK WI KGEI+ A + Q + P Q Sbjct: 180 DIDYGFHEARTTFGRIGVKCWINKGEIMPEGYTGADLTQMDDPGPQAP 227 >UniRef50_Q3KLH5 30S ribosomal protein S3 n=13 Tax=Chlamydiaceae RepID=RS3_CHLTA Length = 224 Score = 271 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 117/213 (54%), Positives = 150/213 (70%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK P G R + K W S W+ N +EF L D K+R++L K+ + + V++R Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + I VTIHTARPG+VIGKKG +VE L+ + + G + IAEV++PEL+A+LVAD I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+ERRV FRRAMK+A+Q+ M GA G+KV+VSGRL GAEIAR+EWY+ GRVPLHTLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAA 213 DIDY T+ A TTYG+IG+KVWI E AA Sbjct: 181 DIDYATASAETTYGIIGIKVWINLSEKKAVPAA 213 >UniRef50_A6LEI5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=RS3_PARD8 Length = 244 Score = 269 bits (689), Expect = 4e-71, Method: Composition-based stats. Identities = 117/211 (55%), Positives = 159/211 (75%), Gaps = 1/211 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P RLGI++ W+S W+ K + D L D K+R+YL LAKASVSRIVIER Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDTLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K I +T+ T+RPGI+IGK G++V+KL++ + I QINI EV++PELDA +VA++I Sbjct: 60 LKLITITVCTSRPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLE ++ +RRA+K A+ + MR+GA+GIK+++SGRL GAE+AR+E Y+EGR PLHTLRA Sbjct: 120 ARQLEGKIAYRRAVKMAIASTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGM 211 DIDY +EA T G++GVKVWI +GE+ G Sbjct: 180 DIDYALAEALTKVGLLGVKVWICRGEVYGKR 210 >UniRef50_A8PNP8 Ribosomal protein S3 n=2 Tax=Gammaproteobacteria RepID=A8PNP8_9COXI Length = 263 Score = 269 bits (688), Expect = 5e-71, Method: Composition-based stats. Identities = 129/234 (55%), Positives = 164/234 (70%), Gaps = 1/234 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANT-KEFADNLDSDFKVRQYLTKELAKASVSRIVIER 59 MG KV+P GIRLGI + + W+A +E+ADNL D R+ + K L +A VS I IER Sbjct: 1 MGHKVNPVGIRLGITRTSTARWYAKKSREYADNLYYDLSARKLIEKALLQAGVSSIQIER 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 A+ ++TI A+PG+VIGKKGE +++LR + I VP ++++ EV+KPELDAKLVA++ Sbjct: 61 AARKSKITISVAKPGVVIGKKGEYIDQLRDQLEKIMRVPVRLSVLEVKKPELDAKLVAEN 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I QLERRVMFRRAMKRAVQ A+RLGA GIK+ V+GRLGGAEIAR+E Y+EG VPLHT R Sbjct: 121 IAQQLERRVMFRRAMKRAVQTALRLGALGIKITVAGRLGGAEIARSERYQEGSVPLHTFR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 ADIDY +EA TTYG +GVKVWI+KGE+ A R +K Sbjct: 181 ADIDYALAEAQTTYGKLGVKVWIYKGEVFDRSKISSLETAEAKTQFLDDRNKKK 234 >UniRef50_C1CXG0 30S ribosomal protein S3 n=61 Tax=Bacteria RepID=RS3_DEIDV Length = 248 Score = 269 bits (688), Expect = 5e-71, Method: Composition-based stats. Identities = 112/233 (48%), Positives = 157/233 (67%), Gaps = 7/233 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++PNG RLGI + WNS W+A K++A L D K+R+ + K+L+ A ++R+ IER Sbjct: 1 MGNKINPNGFRLGITRGWNSRWYAGKKQYAGLLKEDEKIRKLVDKKLSAAGIARVEIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADS 119 + + V I A+PGIVIGK G+ +++LR + + +N+AE+ P + A LVA Sbjct: 61 GQQVNVIISAAKPGIVIGKGGDSIKQLRADIEKLVSAGTVAVNVAEIPNPNISAPLVALR 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ERR FRRAMK+A Q M GA+G+KV +SGRLGGAE AR E REGRVPLHTLR Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVVLSGRLGGAEQARRETVREGRVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGR 232 ADIDY T+ A TTYG++G+KV +F GE++GG + A+P+++ + R Sbjct: 181 ADIDYGTALARTTYGILGIKVMVFTGEVIGGRT------ETIARPQRRNDERR 227 >UniRef50_B4CUY0 Ribosomal protein S3 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY0_9BACT Length = 251 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 116/220 (52%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G RL + + W S W+A+ KE D L+SD K+R+Y+ +L A+VS+IVIER Sbjct: 1 MGQKVNPIGYRLAVNRDWRSRWYASPKELPDFLNSDLKIRRYVKDKLRLAAVSKIVIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG-VPAQINIAEVRKPELDAKLVADS 119 SIRVTI TARPGIVIG+KG ++E + K + ++ +I+I E++ PELDA+LVA++ Sbjct: 61 WNSIRVTIFTARPGIVIGRKGTEIENMTKEIERLSNGKSVKIDIQEIKTPELDAQLVAEN 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 + Q+ERR+ FRRAMK+++Q M GA+GIK+ +GRLGGAEI+R EWYREG++PLHTLR Sbjct: 121 VALQIERRISFRRAMKKSIQQTMEFGAQGIKLRCAGRLGGAEISRAEWYREGKIPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEK 219 IDY +EA+T YG IGVK W+ K E ++ EK Sbjct: 181 QPIDYGFAEANTVYGKIGVKCWLCKPEGANEPQPADKEEK 220 >UniRef50_A9NED9 30S ribosomal protein S3 n=175 Tax=Bacteria RepID=RS3_ACHLI Length = 256 Score = 266 bits (681), Expect = 3e-70, Method: Composition-based stats. Identities = 111/238 (46%), Positives = 157/238 (65%), Gaps = 6/238 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER- 59 MGQK +PNG+RLGI++ W S W+A+ K+ + D +R++L + +KA VS+I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESKWYADQKDVPALIKEDALIREFLNENFSKAGVSQIEIERV 60 Query: 60 ---PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLV 116 + + + ++ ++PGI +GK+ K + + +NI EVR+PE A LV Sbjct: 61 KAKSKERVTIKLYVSKPGIALGKEASVKNKAVSTLEYLTKKEVILNIIEVRRPEKVAVLV 120 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 A SI QLE R FRRA K A+Q A++ GAKGI+ VSGRLGGAE+AR+E Y EGRVPLH Sbjct: 121 AQSIAEQLENRASFRRAQKMAIQRALKSGAKGIRTLVSGRLGGAEMARSEGYSEGRVPLH 180 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAA--VEQPEKPAAQPKKQQRKGR 232 TLRAD+DY T+EA TTYG++G+KVWI+ GE+L G + +P + Q + Q+R+ R Sbjct: 181 TLRADVDYATAEAKTTYGILGIKVWIYHGEVLPGQSILDTRKPFEAGNQKRGQKRRPR 238 >UniRef50_D2QSG4 Ribosomal protein S3 n=15 Tax=Bacteria RepID=D2QSG4_9SPHI Length = 302 Score = 266 bits (681), Expect = 3e-70, Method: Composition-based stats. Identities = 127/227 (55%), Positives = 172/227 (75%), Gaps = 1/227 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P G+RLGIV+ W S+W+ KEF++ L D K+R+Y+ + K +++R+VIER Sbjct: 1 MGQKINPVGLRLGIVRGWESSWY-GGKEFSEKLVEDEKIRKYVAARIPKGAIARVVIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K + +TIHTARPGIVIGK G +V+K+++ + I G QINI E+++PE+DAKLV ++I Sbjct: 60 LKRVTLTIHTARPGIVIGKGGGEVDKIKEELKKITGKDVQINIFEIKRPEIDAKLVGEAI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL+ R+ FRRAMK+A+Q+A+R+GA+GIKV+VSGRLGGAEIAR+E Y+EGRVPLHTLRA Sbjct: 120 AQQLQARISFRRAMKQAIQSAIRVGAQGIKVKVSGRLGGAEIARSEQYKEGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQ 227 DIDY SEA T YG IG+KVWIFKGE+ G AQ ++ Sbjct: 180 DIDYAISEAQTVYGKIGIKVWIFKGEVYGKRDLSPAAMMSQAQAGER 226 >UniRef50_Q11QB8 30S ribosomal protein S3 n=26 Tax=Bacteria RepID=RS3_CYTH3 Length = 254 Score = 265 bits (677), Expect = 9e-70, Method: Composition-based stats. Identities = 118/211 (55%), Positives = 159/211 (75%), Gaps = 1/211 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G RLG+VK W S W+ K FAD L D ++R+Y+ + K +S+IVIER Sbjct: 1 MGQKVNPIGFRLGVVKGWESNWY-GGKTFADKLVEDEQIRKYVLARIPKGGISKIVIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K + +TI+TARPG+VIGK G +V+K+++ + I G QINI E+++PE++A LV +SI Sbjct: 60 IKRVTLTINTARPGVVIGKGGAEVDKIKEELKKITGKDVQINIFEIKRPEMEALLVGESI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL+ R+ +RRAMK+A+ MR+GA GIK+++SGRLGGAE+ART+ Y+EGR+PLHTLRA Sbjct: 120 AQQLKARISYRRAMKQAIAGTMRVGALGIKIKLSGRLGGAEMARTDQYKEGRIPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGM 211 DIDY SEA T YG IG+KVWIFKGE+ G Sbjct: 180 DIDYAVSEALTVYGKIGIKVWIFKGEVYGKR 210 >UniRef50_B2S2E2 30S ribosomal protein S3 n=2 Tax=Treponema pallidum RepID=RS3_TREPS Length = 247 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 2/235 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK--ELAKASVSRIVIE 58 MGQKV P G+RLGI K W+S W+A +E+A L D ++R + E A ++ + I Sbjct: 1 MGQKVSPIGLRLGINKVWSSRWYAGPREYAALLHEDLRIRSMIRSFPECKNADIAEVEIV 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVAD 118 R + + V +HTARPG+VIG KG ++EK+ V QI + E+++ EL+A LVA Sbjct: 61 RHPQRVTVVMHTARPGVVIGAKGVNIEKIGAEVQKRLNKKVQIKVKEIKRMELNAYLVAQ 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 ++ QL RV FR+ +++A M+ GA+G+K+ VSGRLGGAE++RTE +EGR PLHTL Sbjct: 121 NVARQLTARVSFRKCLRQACAGTMKSGAQGVKIRVSGRLGGAEMSRTEEIKEGRTPLHTL 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 RADIDY +EAHTTYG IGVKVW++ G + G + ++ +K + Sbjct: 181 RADIDYGFAEAHTTYGSIGVKVWLYSGMMYGNECRKDVGSLLRRSRRESGQKSDE 235 >UniRef50_Q2GED3 30S ribosomal protein S3 n=2 Tax=Neorickettsia RepID=RS3_NEOSM Length = 211 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 100/209 (47%), Positives = 137/209 (65%), Gaps = 1/209 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G RL S W++ + ++A + D+ V +Y+ A +S+++I+R Sbjct: 1 MGQKVNPVGFRLWTHGSHGSVWYSKSCDYAKTVAEDYFVTKYVESSFAHIGISKVIIKRK 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 S +T+H +PG++IGKKG D+E R + G +N+ EV+KP A LVA SI Sbjct: 61 GASCDITLHCMKPGLIIGKKGADLESFRLKLNKKFGFVPSLNVVEVKKPNSSAVLVAKSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMR-LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 QLE+R FRR +K+A+ MR KG+KV SGRL GAEIARTE ++EG +PLHT+R Sbjct: 121 AFQLEKRSSFRRVIKKAIATVMRESDVKGVKVACSGRLSGAEIARTEVFKEGSIPLHTMR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 ADIDY +EAHTTYGVIGVKVWI++G I Sbjct: 181 ADIDYWVAEAHTTYGVIGVKVWIYRGNIF 209 >UniRef50_B4U750 30S ribosomal protein S3 n=6 Tax=Bacteria RepID=RS3_HYDS0 Length = 231 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 106/211 (50%), Positives = 152/211 (72%), Gaps = 1/211 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK HP G R+G+ K W S W + KE+ + L D +R+Y+ + A +S++ IER Sbjct: 1 MGQKTHPIGFRIGVTKDWLSKWCTSKKEYPNTLHEDIVIRKYIKERYKSAGISKVTIERS 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADI-AGVPAQINIAEVRKPELDAKLVADS 119 + IRV I +++PGI+IG+KG +V++L+ + I +++ EVR P+LDA+LVA+ Sbjct: 61 GEKIRVRILSSKPGIIIGRKGAEVDQLKNDLERIVKNKDISLSVDEVRVPQLDAQLVAED 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ERRV RRAMKRA+ NA++ GAKGIKV+V GR+GGA++AR EW+ GR+PL TLR Sbjct: 121 IALQIERRVSHRRAMKRAIDNAIKSGAKGIKVQVKGRIGGADLARAEWFLVGRMPLQTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210 ADIDY + A+T YG++G+KVWI+KG+IL G Sbjct: 181 ADIDYGYATAYTKYGILGIKVWIYKGDILKG 211 >UniRef50_C1KRC6 30S ribosomal protein S3, chloroplastic n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1KRC6_9CHLO Length = 227 Score = 263 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 98/232 (42%), Positives = 150/232 (64%), Gaps = 7/232 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G R+G+ + S WFA K++A+ + D +R Y+ K L+ AS+SR+ I R Sbjct: 1 MGQKVHPLGFRIGVTQTHRSQWFAKPKDYANLVKEDLVIRDYVAKHLSDASISRVNISRQ 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQI--NIAEVRKPELDAKLVAD 118 I + TARP ++G KGE + K+R+ ++ + + + +PE+DA +A+ Sbjct: 61 VDRIEIEFFTARPRALVGAKGEALVKVREALSAKLPAHRSVALYVTKTVQPEVDAVCIAE 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 +I QLE+R FRR +++A+++A + GA GIKV+++GRL GAEIAR+EW REGRVPLHT+ Sbjct: 121 NIAMQLEKRAPFRRTIRQALRSAQQAGAVGIKVKIAGRLNGAEIARSEWSREGRVPLHTI 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 RADIDY T+ A T YG++G+KVW+ K + +P+ A+ P + + Sbjct: 181 RADIDYATARALTVYGILGIKVWVCKDD-----TERFKPQPSASAPSGSEGR 227 >UniRef50_Q3APH9 30S ribosomal protein S3 n=8 Tax=Chlorobium/Pelodictyon group RepID=RS3_CHLCH Length = 253 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 105/232 (45%), Positives = 162/232 (69%), Gaps = 4/232 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--ASVSRIVIE 58 MGQKV+P G RLGI++ W S W+ ++ ++ + D +R Y+ L K A ++RI IE Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVISEKIKQDHIIRNYVLARLKKERAGIARINIE 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVAD 118 R K +++ I+ ARPG V+G+KGE++ L + ++ I G +I++ EV KPE++A+L+ + Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELSRIIGKEVKIDVVEVIKPEIEAQLIGE 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 +I QLE RV FRRAMK+A+Q AMR GA+G+++ +GRLGGAEIAR E Y+EG++PLHT+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 RA++DY + AHT G IG+KVW++KGE+L + ++ E+ + K +R Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVL--VQRIDAIEEDEMKKMKDRRN 230 >UniRef50_Q04G79 30S ribosomal protein S3 n=3 Tax=cellular organisms RepID=RS3_OENOB Length = 267 Score = 262 bits (669), Expect = 8e-69, Method: Composition-based stats. Identities = 111/223 (49%), Positives = 150/223 (67%), Gaps = 7/223 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P G R+G+++ W++ W+A+ KE+ L D ++R+YL L A+V RI IER Sbjct: 1 MGQKINPIGFRVGVIRDWDAKWYADKKEYVPALQEDLRIRKYLETNLKDAAVDRITIERT 60 Query: 61 -AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG------VPAQINIAEVRKPELDA 113 I +TIHTA+PGIVIG+ G DVE+LR ++ I INI E+RKP+L+A Sbjct: 61 EPTRINLTIHTAKPGIVIGRGGADVERLRSELSKIVDTYKGQHKRVNINIVEIRKPDLNA 120 Query: 114 KLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 LV I + LERRV FRRAM+ A+Q R GAKG++ VSGRL GA+IAR E Y EG V Sbjct: 121 HLVGQQIAADLERRVAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTV 180 Query: 174 PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQ 216 PLHTLRADIDY+ EA T+YG +G+K WI++G+ G ++ Sbjct: 181 PLHTLRADIDYSWDEAMTSYGNLGIKTWIYRGDAENGQFIKDE 223 >UniRef50_C7H0X5 Ribosomal protein S3 n=8 Tax=Bacteria RepID=C7H0X5_9FIRM Length = 300 Score = 262 bits (669), Expect = 9e-69, Method: Composition-based stats. Identities = 117/230 (50%), Positives = 158/230 (68%), Gaps = 3/230 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV P+G+R+GI K W S W+A+ K FAD L D +R+++ +L A VS+I+IERP Sbjct: 1 MGQKVSPHGLRVGINKEWGSKWYADKKSFADFLAEDKAIREHVKTKLYGAGVSKILIERP 60 Query: 61 A-KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 A ++V I R G+VIGK G+ E ++K +A + G ++I +V + ELDA+L A+ Sbjct: 61 AEDKVKVIIAVGRSGMVIGKGGDGHEAIKKSLAKLTGKEVAVDIRQVGRTELDAQLTAER 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I LE+RV +RRAMK+A+ AM+ GAKGIK+ VSGRLGGAEIAR E Y EG VPLHTLR Sbjct: 121 IAEDLEKRVSYRRAMKQAMGRAMKAGAKGIKLLVSGRLGGAEIARDEKYSEGNVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEIL--GGMAAVEQPEKPAAQPKKQ 227 +DIDY +EA TTYG +GVK+WI GEIL G + + +K +P + Sbjct: 181 SDIDYGFAEADTTYGKLGVKIWINHGEILDKGLQDLIREEKKDGRKPTGK 230 >UniRef50_Q3ZZL8 30S ribosomal protein S3 n=38 Tax=Bacteria RepID=RS3_DEHSC Length = 278 Score = 261 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 111/218 (50%), Positives = 156/218 (71%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG+KVHP G RLGI+K W++ W A+ K FA+ L D K+R+ ++K+ A++S++ IER Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKNFAECLTEDLKLRKAISKKYVDAAISQVDIERQ 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + + V++ TARPGIVIG+ G+ V+++R + D+ G Q+NI E+ + ELDA LVA S+ Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEDLIGKKVQLNIVEISQAELDAFLVARSV 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+ERRV +RRAMK+A+ +M+ GAKGIK+ SGRLGG EIAR E EGRVPLHTLRA Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKICASGRLGGVEIARREVMHEGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE 218 DIDY + AHT G +G+KVW+++G+IL + E Sbjct: 181 DIDYGCTRAHTALGDVGIKVWVYRGDILPEAKEKSESE 218 >UniRef50_C1XH61 SSU ribosomal protein S3P n=2 Tax=Meiothermus RepID=C1XH61_MEIRU Length = 253 Score = 259 bits (662), Expect = 5e-68, Method: Composition-based stats. Identities = 109/237 (45%), Positives = 153/237 (64%), Gaps = 4/237 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++P G+RLGI + + S W+A K +A L+ D +R + KEL +A ++RI IER Sbjct: 1 MGNKINPVGLRLGITRDFESRWYAGKKAYAKTLEEDRLIRALIEKELHQAGLARIDIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA-DIAGVPAQINIAEVRKPELDAKLVADS 119 A ++ V ++ A+PG+VIG+ GE +++LR+ + G +N+ EV P L A LVA Sbjct: 61 ADNVTVMVYAAKPGVVIGRGGETIKRLRETLQSRFPGKTVALNVQEVGNPNLSAPLVAQR 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 + Q+ERR RR++K+AVQ GA G K+ VSGR+GGAE AR EW EGRVPLHTLR Sbjct: 121 VAEQIERRFAVRRSIKQAVQRVRESGALGAKIVVSGRIGGAEQARVEWAAEGRVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAV---EQPEKPAAQPKKQQRKGRK 233 A+IDY T+ A TTYG +GVK ++F GE++GG V +PAA + Q K R+ Sbjct: 181 ANIDYGTARAETTYGSLGVKAYVFMGEVIGGKKVVPGAAPAARPAAPKRDQDGKPRR 237 >UniRef50_B0SA41 30S ribosomal protein S3 n=6 Tax=Leptospira RepID=RS3_LEPBA Length = 225 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 101/216 (46%), Positives = 155/216 (71%), Gaps = 1/216 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G+R+GI + W+S WF+ +++ NL D K+R++L K+ ASV +I+IER Sbjct: 1 MGQKVNPIGLRIGITRNWDSVWFS-KQDYIKNLHEDIKIRRFLQKKFKNASVVKIIIERF 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + I V +HT++PG+VIG+KG+++E +++ + A P +NI EV+KPE+ A+ +A+++ Sbjct: 60 PEKINVNLHTSKPGMVIGQKGQNIEAVKQELKKFADKPIGMNIIEVKKPEIIAQAIAETV 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+E+R+ FRR MK ++ AMR G +G+K+++SGRL GA++ARTE Y EGRVPLHTLRA Sbjct: 120 ALQIEQRMPFRRVMKAELRRAMRGGVEGVKIQISGRLNGADMARTEKYMEGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQ 216 ID+ EA TT+G IGVKVW + G+ ++ Sbjct: 180 KIDFGFKEALTTFGQIGVKVWTYTGDYFPTKEESDE 215 >UniRef50_B3PMP1 30S ribosomal protein S3 n=4 Tax=Mycoplasma RepID=RS3_MYCA5 Length = 247 Score = 255 bits (653), Expect = 6e-67, Method: Composition-based stats. Identities = 97/236 (41%), Positives = 144/236 (61%), Gaps = 4/236 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+PNG R GI K NS W+A+ +FA +L D K+ + K++ + + + I+R Sbjct: 1 MGQKVNPNGFRYGITKAHNSVWYADKMQFASHLLEDQKIYDFFDKKVRQLQIGNVQIKRN 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVAD---IAGVPAQINIAEVRKPELDAKLV 116 I + ++TA+P +++G GE+++ L K + I + E++KP+L+A+L+ Sbjct: 61 QNGLILIYVYTAKPAVMLGTNGENIKNLTKDLQKILKNKKANISIQVIELKKPDLNARLL 120 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 A+ I +LE R FR A K A++ A++ GAKGIK VSGRL G ++ARTE Y EG + LH Sbjct: 121 AEDIAIKLENRGSFRLAQKFAIKAALKAGAKGIKTSVSGRLNGVDMARTEGYNEGEMKLH 180 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGR 232 TLR D+DY + A TTYG++GVKVW+ GEIL +Q E K +R R Sbjct: 181 TLRQDVDYAATTAKTTYGILGVKVWVSLGEILSDEQKAKQEEMDLLNAPKDRRVRR 236 >UniRef50_B2KEL5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=RS3_ELUMP Length = 239 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 106/204 (51%), Positives = 140/204 (68%), Gaps = 1/204 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++P G+RLG + W S WFA K + D ++R+ + + A++S + IER Sbjct: 1 MGHKINPKGLRLGYTQDWQSRWFA-PKNMPALIIEDKRIRELIEERFKMAAISFVGIERA 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +R+ IHTARPG+VIGKKG D+E+LRK + + G +N+ E++ PE DA LVA SI Sbjct: 60 GAFLRINIHTARPGVVIGKKGADIEQLRKDLEKMTGSKTFVNVVEIKNPETDASLVAQSI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+E+R + AMK+A++ A+ A GIK+ VSGRLGGAEIARTEW REGRVPLHTL A Sbjct: 120 CMQIEKRAHYGAAMKKAIEKALAGKALGIKIMVSGRLGGAEIARTEWKREGRVPLHTLCA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFK 204 +IDY T+EA T G IG KVWIFK Sbjct: 180 EIDYGTAEAMTISGKIGCKVWIFK 203 >UniRef50_A9FGJ7 30S ribosomal protein S3 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=RS3_SORC5 Length = 230 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 107/230 (46%), Positives = 152/230 (66%), Gaps = 14/230 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK HP G R+G++K W+S W+ + + L D ++++ + + L A+++ + IER Sbjct: 1 MGQKTHPYGFRVGVIKTWSSKWYEDGAAYQKWLHQDIRIKRAIKQYLYNANIAGVEIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKV--------------VADIAGVPAQINIAEV 106 A +V + TARPG+VIGK G+ +E L+ V+ I++ EV Sbjct: 61 ANRAKVIVFTARPGMVIGKGGKGIETLKSGNVGTASKGETLFPGVSSFTDNEVFIDVQEV 120 Query: 107 RKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTE 166 RK E +A+LVA++I +QLERR+ FRRAMK+AV AM+ GAKGI+V +GRLGG+E++R E Sbjct: 121 RKAETNAQLVAENIATQLERRIAFRRAMKKAVSTAMKFGAKGIRVRCAGRLGGSEMSRVE 180 Query: 167 WYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQ 216 YREGRVPLHTLRADI++ +EA T G+IGVKVW+FKGE+L A Q Sbjct: 181 TYREGRVPLHTLRADIEFGLAEARTKVGIIGVKVWMFKGEVLQRKARRIQ 230 >UniRef50_Q7UN14 30S ribosomal protein S3 n=5 Tax=Planctomycetaceae RepID=RS3_RHOBA Length = 236 Score = 253 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 99/236 (41%), Positives = 150/236 (63%), Gaps = 6/236 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKE-----LAKASVSRI 55 MGQKV+P R G+ + W S W+A+ ++FAD L D K+R+++TK A + RI Sbjct: 1 MGQKVNPIAFRTGVTRGWGSRWYASKQDFADLLVEDRKIREFITKHPKKSQYKSAGIDRI 60 Query: 56 VIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKL 115 IER +RV ++ ARPG++IGKKG+++E L+ + ++ G + + EV +PEL A+L Sbjct: 61 EIERTRDEVRVMLYVARPGLIIGKKGQEIEILQAELQNLVGRRINLKVEEVGRPELQAQL 120 Query: 116 VADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPL 175 VA+ I+ QL +R FRR MKR ++ M GAKGIK++++GRLGGAE+AR E G +PL Sbjct: 121 VAEDISQQLAKRSSFRRTMKRMLEQTMDAGAKGIKIQMAGRLGGAEMARREKQSAGSIPL 180 Query: 176 HTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVE-QPEKPAAQPKKQQRK 230 TL+A IDY +EA T G IG++VWI +G + Q + + +PK+ ++ Sbjct: 181 STLQAKIDYGFTEAMTPQGHIGIQVWINQGTYGDDNDGADAQTGQASKKPKRSYKR 236 >UniRef50_C7BEM5 30S ribosomal protein S3, chloroplastic n=2 Tax=Chlorophyta RepID=C7BEM5_PEDMN Length = 233 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 100/232 (43%), Positives = 135/232 (58%), Gaps = 26/232 (11%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G+RLGI + S W+A T++++ + D +R YL +A +SRI I+R Sbjct: 1 MGQKIHPLGLRLGITQNPRSYWYAPTEQYSYLVVEDSILRNYLNNTYKEAGISRINIQRK 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA------------------------- 95 I V + ARP I +GK + +E LR+ + A Sbjct: 61 LNQIYVEVLAARPAIFVGKDTKGIESLRQTLEQKALSYRHDLVQHYGSSFFNEERGTILF 120 Query: 96 -GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 + + E PE DA + D + QLE+RV FRRA+++A+Q A R KGIK++VS Sbjct: 121 QNPKVVLQVTERVNPEDDAAFLGDFVVEQLEKRVAFRRAVRQAMQRAQRARVKGIKIQVS 180 Query: 155 GRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 GRL GAEIARTEW REGRVPL TLRA+IDY+ A T YG++GVKVW+FK E Sbjct: 181 GRLNGAEIARTEWVREGRVPLQTLRANIDYSYKTARTIYGLLGVKVWVFKNE 232 >UniRef50_Q8YPI5 30S ribosomal protein S3 n=228 Tax=cellular organisms RepID=RS3_ANASP Length = 260 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 112/222 (50%), Positives = 150/222 (67%), Gaps = 7/222 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELA-----KASVSRI 55 MGQK+HP G RLGI + S WFA + + L D K+RQY+ ++L A +S + Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAEPSRYPELLQEDHKLRQYIEQKLGRLAQNNAGISEV 60 Query: 56 VIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQI--NIAEVRKPELDA 113 IER A I + + TARPG+V+G+ G+ +E LR + + G QI N+ EV++ + DA Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIEALRTGLQTLLGGNRQIRINVVEVQRVDADA 120 Query: 114 KLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 L+A+ I QLERRV FRR +++A+Q A + G +GIKV+VSGRL GAEIARTEW REGRV Sbjct: 121 YLIAEFIAQQLERRVSFRRVVRQAIQRAQKAGIQGIKVQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVE 215 PLHTLRADIDY+ A T YG++G+KVW+FKGEI+ G Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQEVAT 222 >UniRef50_C0JWV6 30S ribosomal protein S3, chloroplastic n=1 Tax=Pycnococcus provasolii RepID=C0JWV6_9CHLO Length = 286 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 89/218 (40%), Positives = 139/218 (63%), Gaps = 14/218 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELA--KASVSRIVIE 58 MGQKV+P G RLG + S WFA++++++ L D VR++LT+E ++ +S + Sbjct: 1 MGQKVNPFGFRLGYSQHHRSDWFASSQDYSKKLQEDLLVRKFLTREFPDTESGISAVYTR 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGED---------VEKLRKVVADIA--GVPAQINIAEVR 107 R + + + IHTARP +++G E + ++R+ + + +P + + E Sbjct: 61 RKGQLLSLEIHTARPRVLLGSNQETQDPTNRVSGLVQVRRDLEKLFPQKIPLSLRLVEET 120 Query: 108 KPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL-GAKGIKVEVSGRLGGAEIARTE 166 +P+ + L+A S+ QLE+RV FRRA+K+ ++ A G G+KV++SGRL GAEIAR+E Sbjct: 121 QPDSNVALLAASLAHQLEKRVAFRRALKQTIKRAQTARGVLGVKVQISGRLNGAEIARSE 180 Query: 167 WYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 W REGRVPLHTLRA++DY T A T YG +G+KVW++K Sbjct: 181 WVREGRVPLHTLRAEVDYATHTARTLYGCLGIKVWLYK 218 >UniRef50_D2ISA0 Ribosomal protein S3 n=1 Tax=Cryptomonas paramecium RepID=D2ISA0_9CRYP Length = 217 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 92/208 (44%), Positives = 138/208 (66%), Gaps = 2/208 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG+V S+W A+ + L DF +R+Y + A +S I I R Sbjct: 1 MGQKVHPLGFRLGVVYRHRSSWVADKGNYPSYLKEDFLLRKYFSSRFLDAGISTIEIHRR 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPA--QINIAEVRKPELDAKLVAD 118 I + ++ +RP ++ ++++++ + ++ A ++++ + P+LDA L+A Sbjct: 61 LTYIDLYLYASRPNALMANSQAAIKEIKEYLRNLGANDACFRVHVLALLHPDLDAYLLAT 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 I+ QLE+R+ FR+ M++A++ A + GAKGIKV++SGRLGGAEI+R+EW REGRVPL TL Sbjct: 121 FISQQLEKRISFRKVMQQAIRRARKAGAKGIKVQISGRLGGAEISRSEWKREGRVPLQTL 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGE 206 ADI+Y EAHT YGV+GVKVWIF+ E Sbjct: 181 YADINYAAKEAHTNYGVLGVKVWIFRRE 208 >UniRef50_P19169 30S ribosomal protein S3, chloroplastic n=1 Tax=Euglena gracilis RepID=RR3_EUGGR Length = 218 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 104/217 (47%), Positives = 138/217 (63%), Gaps = 13/217 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER- 59 MGQKVHP G RLGI K +S W+ + +A + D +R ++ KEL + +S I IER Sbjct: 1 MGQKVHPLGFRLGITKSHSSFWYVERRHYASFVKEDIVIRNFMNKELLETLISLIKIERI 60 Query: 60 -----PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG----VPAQI---NIAEVR 107 + V IH ARP VIG+ G+ + ++R ++ D +I + V Sbjct: 61 YEFSEQRNNTIVYIHVARPERVIGRDGQGLSRIRDILIDRMNYLLGKTPRIITCKVVGVT 120 Query: 108 KPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEW 167 P LDA+L+ADS+ +LE+R F RAMK + AM+ GA+GIKV+VSGRL G EIARTEW Sbjct: 121 SPNLDARLLADSVRRELEKRTPFIRAMKTVMLQAMKAGAEGIKVQVSGRLNGIEIARTEW 180 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 +REGRVPLHTLRADIDY AHT YGV+G+KVW++K Sbjct: 181 FREGRVPLHTLRADIDYFNDIAHTIYGVLGIKVWVYK 217 >UniRef50_B7J249 30S ribosomal protein S3 n=23 Tax=Bacteria RepID=RS3_BORBZ Length = 293 Score = 243 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 103/231 (44%), Positives = 152/231 (65%), Gaps = 3/231 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELA--KASVSRIVIE 58 MGQKVHP +R+ I K W S W+ + K ++ L DF +R+ + K L K +S I I Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 59 RP-AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVA 117 R + + V I T RPG VIG KG ++EK+ +++ I I EV++PELDA+++A Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 + I Q+E R +R+ +K ++ +M GA+G+K++++GRLGGAEIAR+ +EGRVPLHT Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQ 228 LRA+IDY SEA TTYG+IGVKVW+FKGE+LG + + +P +++ Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQTNSDAGQVINKKPFRER 231 >UniRef50_Q20F10 30S ribosomal protein S3, chloroplastic n=2 Tax=Chlorophyta RepID=RR3_OLTVI Length = 235 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 92/233 (39%), Positives = 137/233 (58%), Gaps = 16/233 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG+ + S WFA +E++ + D +R+ L K + + + I+R Sbjct: 1 MGQKVHPLGFRLGVTQKHRSQWFAKPQEYSQLVLEDHFLREELNKRFPNSGIIDLFIQRK 60 Query: 61 AKSIRVT--IHTARPGIVIGKKGEDVEKLRKVVAD--------------IAGVPAQINIA 104 +V I T RPG+++G+K ++ +KL+++ + + + Sbjct: 61 VDRTQVEVEIRTTRPGLLVGRKRQNCDKLKQLRDELQVELNKFRAKNGVSPTAKVALQVT 120 Query: 105 EVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 164 V+ +A ++A+ + +QLERR+ FRRA++R + R +G K++VSGRL GAEIAR Sbjct: 121 TVQNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDRVQGAKIQVSGRLNGAEIAR 180 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQP 217 +EW R GRVPL TLRAD+DY EA T YG++G+KVW FKGEI AVE P Sbjct: 181 SEWIRTGRVPLQTLRADVDYCHREAKTIYGILGIKVWTFKGEIKPVRKAVEVP 233 >UniRef50_P41205 30S ribosomal protein S3 n=2 Tax=Mycoplasma RepID=RS3_MYCPN Length = 273 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 100/240 (41%), Positives = 143/240 (59%), Gaps = 10/240 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTK-EFADNLDSDFKVRQYLTKELAKASVSRIVIER 59 MGQKV+ NG+R GI K W S W AN+ + A L D K+R A VS + IER Sbjct: 1 MGQKVNSNGLRFGINKNWISRWTANSHAQTAKWLIEDEKIRNLFFVNYRNAQVSNVEIER 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN--IAEVRKPELDAKLVA 117 ++ V ++ A+P +IG + ++++K+ K + I G ++ I E+ P L A+++A Sbjct: 61 TQATVDVFVYAAQPAFLIGSENKNIQKITKQIKQIIGRTTNLDLTINEIGSPMLSARIIA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 + + +E RV R AM++++ ++ GA GIKV VSGRL GAEIAR + Y EG +PL T Sbjct: 121 RDLANAIEARVPLRTAMRQSLIKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLST 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEILG-----GMAAVEQPEKPAAQPKKQQRKGR 232 LRADIDY +A TTYGVIGVKVWI +G I A + P+K QP +Q ++ R Sbjct: 181 LRADIDYALEKAQTTYGVIGVKVWINRGMIYTKGLNRTPAHILHPQKK--QPNRQNQQPR 238 >UniRef50_P56798 30S ribosomal protein S3, chloroplastic n=103 Tax=Streptophyta RepID=RR3_ARATH Length = 218 Score = 240 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 82/217 (37%), Positives = 126/217 (58%), Gaps = 11/217 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--------ASV 52 MGQK++P G RLG + +S WFA K++++ L+ D K+R + + K + Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA---DIAGVPAQINIAEVRKP 109 +RI I++ I++ I+ P ++I K VE+L+ V + I I + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120 Query: 110 ELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYR 169 D ++A+ I QL+ RV FR+AMK+A++ + KGI+V+++GR+ G EIAR EW R Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 EGRVPL T+ A IDY + T YGV+G+K+WIF E Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDE 217 >UniRef50_Q32RN6 30S ribosomal protein S3, chloroplastic n=32 Tax=Streptophyta RepID=RR3_ZYGCR Length = 236 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 140/229 (61%), Gaps = 21/229 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--------ASV 52 MGQK+HP G RLG+ + +STWFA +++ L D ++R + + + K A + Sbjct: 1 MGQKIHPLGFRLGVTQNHHSTWFAPLNNYSELLKEDERIRNCIQQYVRKYVRSSSRSAEI 60 Query: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGED---------VEKLRKVVAD---IAGVPAQ 100 +R+ I++ + V IHTA P +++ + + +E LR+ + + Sbjct: 61 ARVQIQKKTDLVEVQIHTASPSLLVQTRVPNRSTNTQEIGIEYLRRNIQNTLNPGNRKLN 120 Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG-AKGIKVEVSGRLGG 159 + +++V KP +A ++A+ I QLE RV FR+ MK+A++ A + G A+GIK++++GRL G Sbjct: 121 MTLSQVAKPYGEAIILAEYIALQLESRVAFRKTMKQAIKLANKSGNARGIKIQIAGRLNG 180 Query: 160 AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 AEIAR EW REGRVPLHTLRA IDY A T YGV+G+KVW+F+ + L Sbjct: 181 AEIARVEWAREGRVPLHTLRAQIDYCHYPAQTIYGVLGIKVWVFQNKSL 229 >UniRef50_B3CT11 30S ribosomal protein S3 n=2 Tax=Orientia tsutsugamushi RepID=RS3_ORITI Length = 219 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 101/210 (48%), Positives = 144/210 (68%), Gaps = 3/210 (1%) Query: 1 MGQKVHPNGIRLGIV--KPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIE 58 MGQKV+P R G + W S +AN ++D L K+R+ + E + A +++I+IE Sbjct: 1 MGQKVNPCIFRTGPNLPRNWESVLYANKNNYSDFLLKILKIRKIINTEYSFAQITKILIE 60 Query: 59 RPA-KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVA 117 P+ K+I V I+ + G++IGK G D+EKL++ +A I INI EV+KPEL+ +A Sbjct: 61 WPSSKNIVVNIYAKKIGVIIGKSGGDIEKLKQNIAKITSADVSINICEVKKPELEEAFIA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 +I QLERR F++ MK+A+ +M+ GAKGIK+ SGRLGG EIAR+E Y+EGRVPL T Sbjct: 121 QTIAQQLERRQSFKKVMKKAIHASMKQGAKGIKIICSGRLGGVEIARSESYKEGRVPLQT 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEI 207 +RADI Y +EA TTYGVIGVKVW+++ ++ Sbjct: 181 IRADIRYAFAEAITTYGVIGVKVWVYRCDV 210 >UniRef50_C0JWQ0 30S ribosomal protein S3, chloroplastic n=1 Tax=Monomastix sp. OKE-1 RepID=C0JWQ0_MONSK Length = 235 Score = 234 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 24/229 (10%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFA---------NTKEFADNLDSDFKVRQYLTKELAKAS 51 MGQK+HP G+R+GI + S WFA + +A ++ D VR + + EL A Sbjct: 1 MGQKIHPLGLRIGIFQKHKSEWFAPVGSSNSNQSIPNYAAFIEQDKGVRDFFSSELRDAG 60 Query: 52 VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV-------------P 98 +S+I+I R + V +H A+P +V+G+ G ++++L + Sbjct: 61 LSKILISRRTNRLFVELHVAQPKLVLGENGNNLKQLTEKFQKNIQKLLSRHNNPSMSAPA 120 Query: 99 AQINIAEVRKPEL--DAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 I + ++ + E+ DA L+ I QLE+RV FRR MK+++Q A GA+GIK++++GR Sbjct: 121 LSIQVVQIPQEEIATDATLLGQKIAEQLEKRVAFRRVMKQSIQQARAAGAEGIKIQIAGR 180 Query: 157 LGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 L GAEIARTEW REGRVPL TL+A+IDY A T YG++G+K+WIFKG Sbjct: 181 LNGAEIARTEWAREGRVPLQTLKANIDYCYETAQTIYGILGIKIWIFKG 229 >UniRef50_Q8M9V0 30S ribosomal protein S3, chloroplastic n=1 Tax=Chaetosphaeridium globosum RepID=RR3_CHAGL Length = 255 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 102/252 (40%), Positives = 141/252 (55%), Gaps = 46/252 (18%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK----------- 49 MGQKV+P G RLG+ + +S WFA K+FA L+ D K+R Y+ + + K Sbjct: 1 MGQKVNPLGFRLGVTQEHHSYWFATNKQFAGFLEEDQKIRHYIYQYVQKHIRESSNTSYG 60 Query: 50 -ASVSRIVIERPAKSIRVTIHT-ARPGIVIG----------------------------- 78 + VS+I I+R + I V IHT P ++I Sbjct: 61 YSGVSKIEIKRDTELIHVEIHTSGFPALLIKGQIKEKNRDKNKSNKNSALDQSVNKNQNK 120 Query: 79 KKGEDVEKLRKVVADIA---GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMK 135 G+++EK+ + V ++ +++V P +A +VA+ I QLE RV FRRAMK Sbjct: 121 NTGQELEKMWRYVQRSLTLSNGKFRMTLSKVSNPYKEANIVAEYIARQLENRVAFRRAMK 180 Query: 136 RAVQNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 +A+++A G KGIK+++SGRL GAEIAR EW REGRVPL TLRA IDY A T YG Sbjct: 181 QAIKDAKENGQVKGIKIQISGRLNGAEIARVEWAREGRVPLQTLRAKIDYCHYPAQTKYG 240 Query: 195 VIGVKVWIFKGE 206 V+G+KVWIF+GE Sbjct: 241 VLGIKVWIFQGE 252 >UniRef50_B1AIM6 30S ribosomal protein S3 n=101 Tax=Bacteria RepID=RS3_UREP2 Length = 257 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTK-EFADNLDSDFKVRQYLTKELAKASVSRIVIER 59 MGQKV+PNG+R GI K W S W + + A L D K+R+YL+ + A + + IER Sbjct: 1 MGQKVNPNGLRFGINKQWLSRWVPTDQLQMAKWLVEDDKIRKYLSTKYKNAGIDHVEIER 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP--AQINIAEVRKPELDAKLVA 117 + + V ++ + G++IG + + + + + I G + + EV+ PEL A L+A Sbjct: 61 DQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVGRKQLVSLKVVEVQIPELQASLMA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 I +E RV FR A K ++ ++ GA+GIK VSGRLGG E+AR E Y +G + LHT Sbjct: 121 REIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVSGRLGGVEMAREEGYTQGVMTLHT 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 LRADIDY+ EAHTTYG+IGVKVWI +GE+ G Sbjct: 181 LRADIDYSMQEAHTTYGIIGVKVWINRGELFG 212 >UniRef50_D0EVS4 30S ribosomal protein S3, chloroplastic n=1 Tax=Bryopsis hypnoides RepID=D0EVS4_9CHLO Length = 243 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 82/236 (34%), Positives = 121/236 (51%), Gaps = 33/236 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G RLG + + WFA + + + D +R + + A + +I I R Sbjct: 1 MGQKIHPYGFRLGNFQKHQANWFAKKENYTQKIFEDLFIRDFFFQRFRDAGILKISINRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDV--------------------------------EKL 87 + I++ I +PG I K + + Sbjct: 61 FNNHIQICIFLTKPGFFISSKNAQLTTIQKTLETAFLKYQSSNFFRLNFLKQSSLSKNNI 120 Query: 88 RKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK 147 + ++ I + E+ K E A +AD + QLE+R+ FRRA+K+ ++ + R + Sbjct: 121 KSILEHQNTPKLTIQLMELVKIEQKAAFLADFLIEQLEKRIAFRRAVKKTLKRSERSKIQ 180 Query: 148 GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 GIK+++SGRL GAEIARTEW REGRVPL TLRA+IDY A T YG++GVKVW+F Sbjct: 181 GIKIQISGRLNGAEIARTEWIREGRVPLQTLRANIDYTYKTAKTIYGILGVKVWVF 236 >UniRef50_P56365 30S ribosomal protein S3, chloroplastic n=3 Tax=Chlorophyta RepID=RR3_CHLVU Length = 231 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 86/231 (37%), Positives = 139/231 (60%), Gaps = 16/231 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER- 59 MGQKVHP G RLGI + S W ++ A + +R ++ K+ A ++ I I+R Sbjct: 1 MGQKVHPIGFRLGITQKHRSYWCTTPQKSALWIQDASFLRNFIKKKYIGAGITHIEIQRQ 60 Query: 60 --PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV-------------PAQINIA 104 + S+ + I+ AR + G + +E+L++ + + ++++ Sbjct: 61 DVDSPSLGIQIYAARLRQIAGNDSKGLERLQEELVKQLQIFYRKRNLVEPGTIHLRLSVK 120 Query: 105 EVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 164 +R PE A+++A+ + +LE+R FRRAM++ VQ A+R G KGIKV++SGRL GA+IAR Sbjct: 121 PLRAPEAYAEVLAEKLVEELEQRKPFRRAMRQTVQRALRAGVKGIKVQISGRLNGADIAR 180 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVE 215 +E REG VPL TLRADIDY++ A T +G++G+K+W+F+GE L ++ V Sbjct: 181 SEDVREGPVPLQTLRADIDYSSKPAKTIFGLLGIKIWVFRGERLTRISNVR 231 >UniRef50_Q601K8 30S ribosomal protein S3 n=6 Tax=Mycoplasma RepID=RS3_MYCH2 Length = 227 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 132/212 (62%), Gaps = 4/212 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+PNG R GI + N+ W+A+ +F+ NL D K+ ++ K + + VI R Sbjct: 1 MGQKVNPNGFRFGITRNHNAIWYADKNKFSINLLEDVKIHRFFEKLTREYQIGNTVIRRD 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP---AQINIAEVRKPELDAKLV 116 + I V ++TA+ G +G GE+++K+ + + ++ +++ PEL+AKL+ Sbjct: 61 RNNAITVLVYTAKLGSFLGASGENLKKIVEKLRKTLKNRKIVINVDAVDIQSPELNAKLM 120 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 A+ I +LE+R +R A K A++ A++ GA G+K V GRL G E+AR E Y EG + LH Sbjct: 121 AELIAEKLEQRKSYRIAQKFAIRTALKNGATGVKTIVCGRLNGVEMARCEGYAEGEMKLH 180 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 TLR +++Y T+ A TTYG++GVKVW+ GEI Sbjct: 181 TLRQNVEYATAIAKTTYGILGVKVWVSLGEIK 212 >UniRef50_D1J746 30S ribosomal protein S3, chloroplastic n=2 Tax=Phaeophyceae RepID=D1J746_ECTSI Length = 222 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 86/217 (39%), Positives = 135/217 (62%), Gaps = 9/217 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT-----KELAKASVSRI 55 MG K HP G RLGIV+ S W++ + + L D+++R+Y+ ++ + ++++ Sbjct: 1 MGHKTHPLGFRLGIVQEDKSLWYSGSNSYVSFLKEDYQIREYIYQFLLLNKVGYSGITKL 60 Query: 56 VIER--PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA-DIAGVPAQINIAEVRKPELD 112 +I+R K I + I + PG ++GK G + KL + ++ + INI E+ KP + Sbjct: 61 IIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRKLDEELSVLLKNKKVLINIVEITKPYTE 120 Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAM-RLGAKGIKVEVSGRLGGAEIARTEWYREG 171 A ++ D + +LE RV FR ++ ++ KGIK++++GRL GAEIARTEW REG Sbjct: 121 ATILVDLLVKKLEERVSFRMCIREILKRYRTEDELKGIKIQIAGRLNGAEIARTEWVREG 180 Query: 172 RVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 RVPL TLRA+IDY+ A TTYG++G+K+W+FK EIL Sbjct: 181 RVPLQTLRANIDYSYKTAQTTYGILGIKIWLFKNEIL 217 >UniRef50_P0C485 30S ribosomal protein S3, chloroplastic n=72 Tax=Spermatophyta RepID=RR3_ORYSJ Length = 239 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 124/240 (51%), Gaps = 36/240 (15%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS--------- 51 MGQK++P G RLG + +S WFA K +++ L D K+R + + K Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRK 89 ++ I I++ +I V IH P ++ KK +E+L K Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLL--KKKGAIEELEK 118 Query: 90 VVA---DIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGA 146 + + I I +V++P ++A+ I QL+ RV FR+AMK+A++ + Sbjct: 119 DLQKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDI 178 Query: 147 KGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 KG+KV+++GRL G EIAR E ++GR+PL T+RA IDY T YGV+GVK+WIF E Sbjct: 179 KGVKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDE 238 >UniRef50_B7T3V4 30S ribosomal protein S3, chloroplastic n=1 Tax=Monsonia speciosa RepID=B7T3V4_9ROSI Length = 266 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 55/258 (21%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL-------AKASVS 53 MGQK++P G RLG + +S WF K + ++L D K+R + + K ++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSVWFEKPKNYCESLKEDKKIRDRIKNYIDNRRSGPMKDLIT 60 Query: 54 RIVIERPAKSIRVTIHTARPGIVIGKKGE--------------------DVEKLR----- 88 RI IE+ I+V I+ + +G K +++LR Sbjct: 61 RIQIEKGMDLIKVIIYMGFQELFMGDKPAKTKKGKRKRGQKGKKEGEPRHIKELRVRELK 120 Query: 89 -----------------------KVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE 125 K ++ ++ I + P D ++A+ + QL+ Sbjct: 121 VNVAKALHLNLSGNRGLKKLNVEKGLSQSGNRQLKVVIRNISNPYGDPNILAEFLADQLK 180 Query: 126 RRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYN 185 R+ FR+AMKR ++ A KG+KV+++GRLGG +IAR E +GRVPLHT+RA ID+ Sbjct: 181 NRISFRKAMKRVIELAKEANTKGVKVQIAGRLGGRDIARVECLLQGRVPLHTIRAKIDFC 240 Query: 186 TSEAHTTYGVIGVKVWIF 203 ++ YGV+G+K+WIF Sbjct: 241 STRVQMLYGVLGIKIWIF 258 >UniRef50_Q06J59 30S ribosomal protein S3, chloroplastic n=1 Tax=Bigelowiella natans RepID=RR3_BIGNA Length = 246 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 39/244 (15%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKE-------------L 47 MGQKVHP G R+G+ + S WF K+++ L D+ +R+ + L Sbjct: 1 MGQKVHPLGFRVGLNGNYKSKWFVKPKDYSLLLFQDYLIRKNIFNYFNILNNSKNKKNLL 60 Query: 48 AKASVSRIVIERPAKSIRVTIHTARPGIVIGK-------------KGEDVEKLRKVV--- 91 +++ I I R + + I+ A VI + V++L++V+ Sbjct: 61 DSINITDIKINRKFDQVYIDIYVASMNKVIFNTSGSNSDPLIKIQSNKIVDQLQRVLLKQ 120 Query: 92 ---ADIAGVPAQ------INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 ++ +NI E +A +A + LE RV FRRA+K + Sbjct: 121 VSSFNLGNKKVNNSSKIIVNIIESPDINTNAVFIAKCLIDDLENRVPFRRALKTILDTTQ 180 Query: 143 R-LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW 201 + G+K+++SGRL G E+AR+EW REGR+PL TL A+I Y A T YG++GVKVW Sbjct: 181 KQKNLAGVKIQISGRLNGIEMARSEWVREGRIPLQTLTANIGYYNDVAETKYGLLGVKVW 240 Query: 202 IFKG 205 ++K Sbjct: 241 VYKN 244 >UniRef50_Q2WGE8 30S ribosomal protein S3, chloroplastic (Fragment) n=2 Tax=Selaginella RepID=Q2WGE8_SELUN Length = 225 Score = 195 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 106/223 (47%), Gaps = 19/223 (8%) Query: 2 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELA------------- 48 G+K +P G RLGI K + W A + ++ + D +VR + Sbjct: 2 GRKTNPLGSRLGIAKNHHPNWSARPRIYSQYVQEDKQVRDCTDAYVHGQRVWNPAGSGGN 61 Query: 49 --KASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK----LRKVVADIAGVPAQIN 102 + R+VI R V H P ++I G +E+ +++ ++D I Sbjct: 62 SGAEGIERVVIRRKTDLPSVETHAGPPAVLIRSHGRGIEQSRMNVQQNLSDSRIGRVHIA 121 Query: 103 IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEI 162 AE P + A + SQ RV FRR K+A++ A + G KGIK +++GR GAEI Sbjct: 122 SAETSGPYGEPNTPAKYMASQPGNRVAFRRTTKKAIEPARKSGRKGIKTQIAGRPNGAEI 181 Query: 163 ARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 AR EW REGRVP T RA IDY A T YGV G KV I + Sbjct: 182 ARVEWAREGRVPPQTSRAQIDYRYYPAQTVYGVSGTKVRILRN 224 >UniRef50_C0QW02 30S ribosomal protein S3 n=3 Tax=Brachyspira RepID=C0QW02_BRAHW Length = 202 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 92/165 (55%), Positives = 113/165 (68%) Query: 44 TKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINI 103 KE ++S I I R I + I TAR G+VIG KG+ VE ++ V + P +I Sbjct: 18 KKESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKPVHFSI 77 Query: 104 AEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIA 163 E+R ELDA L A S+ QLE RV FRRAMK + AM+ GAKGIKV SGRL GA+IA Sbjct: 78 TEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIA 137 Query: 164 RTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 RTE Y+ G VPLHTLRA+IDY T+EA TT+G+IG+KVWI+KGEIL Sbjct: 138 RTEQYKNGSVPLHTLRANIDYGTAEALTTFGIIGIKVWIYKGEIL 182 >UniRef50_B2Y1Z8 30S ribosomal protein S3, chloroplastic n=1 Tax=Welwitschia mirabilis RepID=B2Y1Z8_WELMI Length = 214 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 117/214 (54%), Gaps = 9/214 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA------SVSR 54 MG KV+P G RLGI + +S WF + + D K+ + + + ++R Sbjct: 1 MGHKVNPLGFRLGITQKNHSVWFVKKRLYPKIFQEDVKIHKSIENYFQRHQQNSYLGIAR 60 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIA--EVRKPELD 112 I IER I V I T + +KG+ + L+ + G ++N+ ++KP + Sbjct: 61 IEIERKVDLINVIIFTGFSSFLNKEKGK-ISSLKNEIRQNLGTKKKLNVKTEILKKPYQN 119 Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGR 172 AK++ + I SQLE+RV ++ +++AV+ A + +GI++ ++GRLGG E R + GR Sbjct: 120 AKILVEFIASQLEKRVAVKKILQKAVELAQKEDIEGIRIRIAGRLGGRERTRKTKKKIGR 179 Query: 173 VPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 V L TLRA+++Y + T +G +G+++WIF E Sbjct: 180 VTLQTLRAEMNYCSYTVRTIHGTLGIQLWIFMKE 213 >UniRef50_B7T425 30S ribosomal protein S3, chloroplastic n=4 Tax=Magnoliophyta RepID=B7T425_9ROSI Length = 243 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 31/234 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK---------ELAKAS 51 M +K++P G RLG + +S WF K + L D ++R + E K Sbjct: 1 MARKINPLGFRLGTNQNHHSVWFEQPKNYCKGLQEDKRIRDCIKNFIDNRRKKSEPMKNL 60 Query: 52 VSRIVIERPAKS----IRVTIHTARPGIV------IGKKGEDVEKLRKVVADIAGVPAQI 101 ++RI IE+ K V I + GKK +++ +++ V + Sbjct: 61 ITRIQIEKSIKKQIHLTTVIIFMGFQELFEEKPKKRGKKEDELRHIKEFSELKVNVEKAL 120 Query: 102 N------------IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGI 149 + I+++ P D ++A+ + L+ R+ FR+AM+R ++ + + KG+ Sbjct: 121 DPNLRRNRELKVVISKIFNPFGDPNILAELLAHLLKTRIPFRKAMRRVIELSKKADIKGV 180 Query: 150 KVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 KV+++GR+ G +IAR E +GRVPLHT+RA ID+ ++ +GV+G+K+WIF Sbjct: 181 KVQIAGRIDGRDIARVECLLQGRVPLHTIRAKIDFCSTRVQMRFGVLGIKIWIF 234 >UniRef50_P58133 Plastid 30S ribosomal protein S3 n=1 Tax=Euglena longa RepID=RR3_ASTLO Length = 219 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 15/219 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK +PNG+R G K S W+ K ++ + D +R++L +++ +S I IE+ Sbjct: 1 MGQKTNPNGLRFGKFKKHFSCWYTENKNYSHFVKQDIFIRKFLMEKIKNVFISLIEIEKD 60 Query: 61 AKSIRVTIHTARPGIVIG----KKGEDVEKLRKVVADIAGVPAQINIA-----------E 105 K + IH + ++ + + + + N+ E Sbjct: 61 NKETVIFIHYLNFSKFNKVETNSEKNEINLFKLKNLLLKSLNSFFNVKINFNEFIIKLIE 120 Query: 106 VRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIART 165 + P LD + +A+ I +LE+R+ FR+ + + N + G KGIK+++SGRL AE+AR Sbjct: 121 IENPILDVRFIANDIRYKLEKRMNFRKIVNSTIANIINKGIKGIKIKLSGRLNDAEMARE 180 Query: 166 EWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 E +REG+VPL+TL+A+IDY A T G +G+KVW+ K Sbjct: 181 ESFREGKVPLNTLKANIDYFHCTAKTLSGSLGIKVWLNK 219 >UniRef50_UPI0001B44297 30S ribosomal protein S3 n=1 Tax=Listeria monocytogenes FSL F2-515 RepID=UPI0001B44297 Length = 194 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 76/145 (52%), Positives = 106/145 (73%), Gaps = 1/145 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G+R+G+++ W+S W+A K++AD L D ++R Y+ K L+ ASVSR+ IER Sbjct: 1 MGQKVHPIGMRIGVIRDWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERA 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 A + +TIHTA+PG+VIGK G +VE LRK + ++ INI E+++ +LDAKLVA++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTKKRVHINIVEIKRADLDAKLVAENI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLG 145 QLE RV FRRA K+A+Q MR G Sbjct: 120 ARQLEGRVSFRRAQKQAIQRTMRAG 144 >UniRef50_Q46GA1 30S ribosomal protein S3P n=8 Tax=Euryarchaeota RepID=RS3_METBF Length = 311 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 5/209 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A ++F ++ + +Y ++L +A + + R ++ I++ +PG+VIGK G+ Sbjct: 1 MAIERKFVNDGFVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGK 60 Query: 83 DVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 + KL + VA + QI+ EV+KPEL+A+++A + + +ER FR+A ++ Sbjct: 61 VIRKLTRDVAARYNLENPQIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAV 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 M GA G +V +SG+L GA +R E + +G + D +D + A G +G K Sbjct: 121 MNAGALGCEVVISGKLTGA-RSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCK 179 Query: 200 VWIFK-GEILGGMAAVEQPEKPAAQPKKQ 227 V I + G +L +P +P +P ++ Sbjct: 180 VRIIQPGVVLPDSYTTTEPSEPVTEPVEK 208 >UniRef50_D2LQE8 Ribosomal protein S3 n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQE8_9EURY Length = 237 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 4/207 (1%) Query: 25 NTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDV 84 + ++F + +++YL KE A A + I+R R+ + RPG+VIG+KG + Sbjct: 2 DERKFVKENVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIILEVERPGMVIGRKGAKI 61 Query: 85 EKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR 143 ++L + GV I + E P L+A+++A + LER FRRA ++ M Sbjct: 62 KELTDKLQQDFGVENPTIEVKESPNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIME 121 Query: 144 LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD-IDYNTSEAHTTYGVIGVKVWI 202 GAKG ++ +SG+L G + ARTE + +G + + + + + A T G+IGV V I Sbjct: 122 AGAKGAQIIISGKLTG-DRARTEKFMDGTIKYNGKPVELVRMGYATAKTKPGIIGVTVKI 180 Query: 203 FKGE-ILGGMAAVEQPEKPAAQPKKQQ 228 + L + P + + + Sbjct: 181 MPPDAKLPDEVNILPPVEAEEEKVNED 207 >UniRef50_Q18GF5 30S ribosomal protein S3P n=7 Tax=Euryarchaeota RepID=RS3_HALWD Length = 323 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 4/186 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A+ +F +N ++ ++ EL +A + + + ++ + +PG+VIGK G+ Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60 Query: 83 DVEKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 ++ K+ + + D + QI++ EV +P+L+A++VAD + + LER FR+A + Sbjct: 61 NIRKVTRELEDRFNLDDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRI 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 + GA G ++ +SG++ GA +R E + G + + A +D A G IGV Sbjct: 121 IESGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVT 179 Query: 200 VWIFKG 205 V I Sbjct: 180 VKIIPP 185 >UniRef50_C7NV53 Ribosomal protein S3 n=7 Tax=Archaea RepID=C7NV53_HALUD Length = 326 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 97/187 (51%), Gaps = 4/187 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A+ +F + ++ ++ EL +A + + + ++ + +PG+VIGK G+ Sbjct: 1 MADELQFIQDGIQRTQIDEFFEDELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60 Query: 83 DVEKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 ++ K+ + + G+ Q+++ EV +P+L+A++VAD + + LER FR+A + Sbjct: 61 NIRKITTTLEEEFGLEDPQVDVQEVEEPDLNARIVADRLANALERGWYFRKAGHTTIDRI 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 M GAKG ++ +SG++ GA +R E + G + + A+ +D+ A G IGV Sbjct: 121 MESGAKGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGVD 179 Query: 200 VWIFKGE 206 V I Sbjct: 180 VKIIPPN 186 >UniRef50_C6UN14 Putative 30S ribosomal subunit protein S3 n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN14_HODCD Length = 226 Score = 177 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 13/229 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K +P G+RL + W FA +++A+ + + KV+ YL + I++ Sbjct: 1 MGNKTNPIGVRLVVRGHWEDAVFARGRDYAEAVYLNHKVKAYLATRYRACGMISSAIKQE 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + V I+T G+ +++ + A +++ + +A + Sbjct: 61 GNAYVVVINTDDVDAFFASAGQSADEMADALKLWFWPDASLSVRRLDDAASHPVNIAFKL 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 + + ++K+ + + GIK +GR+ G +IA+T W+ EGR+PLHTL A Sbjct: 121 MDDVATNSTVKASVKQMAKALVGTSVAGIKASYAGRIYGGDIAQTVWHIEGRIPLHTLAA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQR 229 D+ Y + T YGV VKVW+ + P+AQP + Q Sbjct: 181 DVRYASVSTKTNYGVCNVKVWVCAND-------------PSAQPLEAQE 216 >UniRef50_B7ZIJ3 30S ribosomal protein S3, chloroplastic n=1 Tax=Ephedra equisetina RepID=B7ZIJ3_EPHEU Length = 215 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 10/215 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA------SVSR 54 MG KV+P G RLG+ + NS WFA +E+ L D K+ + + + + R Sbjct: 1 MGHKVNPMGFRLGLTQNHNSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGR 60 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA---GVPAQINIAEVRKPEL 111 I I+R I + I+ P +K E + +++ + IN + KP Sbjct: 61 IEIQRKIDLINIIIYIGFPIFFKNEKNE-ITRVKNDIKRTLYLRDQKLNINAEILAKPYQ 119 Query: 112 DAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREG 171 ++A+ I QLE+RV ++ +++AV+ A + +GI++ ++GRLGG E R + G Sbjct: 120 KTNILAEYIALQLEKRVAVKKILQKAVELAKKDEIEGIRIRIAGRLGGRERTRKTKIKLG 179 Query: 172 RVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 RV L TLRA++DY++ T +G +G+++WIF E Sbjct: 180 RVTLQTLRAEMDYSSFTVRTIHGALGIQLWIFMKE 214 >UniRef50_A7I5P5 30S ribosomal protein S3P n=2 Tax=Methanomicrobiales RepID=RS3_METB6 Length = 231 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 5/207 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A ++F +V +YLTKEL +A + I R +VTI +PGIVIGK G+ Sbjct: 1 MAVERKFIAEGARKARVEKYLTKELKRAGFGGMDIARTPLGTQVTIFAEKPGIVIGKGGK 60 Query: 83 DVEKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 V +L + +A GV QI + +V+ P +A+++A+ + + LER FR+A ++ Sbjct: 61 LVHQLTQDLAQNYGVESPQIEVQQVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRV 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 M GA G +V ++G+L GA ART+ + EG + ++ ++ + A GVIGV+ Sbjct: 121 MDSGALGCEVVIAGKLTGA-RARTQKFTEGYIKHCGEPSNTIVEKGYAIAIKKLGVIGVQ 179 Query: 200 VWIFKGE-ILGGMAAVEQPEKPAAQPK 225 V I + + A+ + EK PK Sbjct: 180 VKIVPADAKMPDHFAIIEQEKKLPAPK 206 >UniRef50_A0B9W4 30S ribosomal protein S3P n=3 Tax=Archaea RepID=RS3_METTP Length = 276 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 5/196 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A K+F + V +YL KEL +A +V+ R ++T++ +PG+VIGK G+ Sbjct: 1 MAVEKKFVQEGFTKALVDEYLAKELDRAGYGGMVMNRTPMGTQITVYAEKPGMVIGKGGK 60 Query: 83 DVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 + KL + + + QI++ +V K +L+A++VA+ + S LE FR+A + ++ Sbjct: 61 LIRKLTRDLERRFRLDNPQIDVQDVGKSDLNARVVANRLASSLEHGWYFRKAGQSMLRRV 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 M GA G ++ +SG+L G +R E + G + A+ +D + A G IG + Sbjct: 121 MDSGALGCEIVISGKLTGP-RSRVEKFLAGYIKHSGKPAEEIVDTGYAVAVKKLGAIGCQ 179 Query: 200 VWIF-KGEILGGMAAV 214 V I G +L + Sbjct: 180 VRIVPPGAVLPDDFQI 195 >UniRef50_UPI0001AEC3A6 30S ribosomal protein S3 n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC3A6 Length = 151 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 98/123 (79%), Positives = 111/123 (90%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP GIRLGI KPW STW+ANT ++ADNL +D +VRQYLTK+L AS+S+IVIERP Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADNLYNDHQVRQYLTKQLKNASLSKIVIERP 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 AKSIRVTIHTARPG+VIGKKGEDVEKLR V+ +AGVPAQINIAEVRKPELD +LVADSI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRNYVSKLAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 TSQ 123 +SQ Sbjct: 121 SSQ 123 >UniRef50_C5A280 30S ribosomal protein S3P n=8 Tax=Thermococcaceae RepID=RS3_THEGJ Length = 209 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 10/190 (5%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A + F + + +YL KEL +A I I++ +V I A PG VIG+ G Sbjct: 1 MAIERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGR 60 Query: 83 DVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 + +L +++ G+ QI + E++ P L+AK+ A + LER + FRRA A++ Sbjct: 61 RIRELTRILERQFGLENPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAI 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYNTSEAHTTYGVI 196 MR GA+G+++ +SG+L G E A++ + +G + P TL + ++A GVI Sbjct: 121 MRNGARGVEIRLSGKLTG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVI 176 Query: 197 GVKVWIFKGE 206 GVKV I + Sbjct: 177 GVKVAIMPPD 186 >UniRef50_A4FWB6 30S ribosomal protein S3P n=11 Tax=Methanococcales RepID=RS3_METM5 Length = 211 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 5/197 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 + F S+ + +Y +L +A S I +++ R+T+ +PG VIG+KG+ V+ Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62 Query: 86 KLRKVV-ADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 +L + + + A QI + +V P+LD +V I S LER + FRR A++ M Sbjct: 63 ELTETLAKEYAVKNPQIEVKQVENPDLDPAIVGHKIASSLERGMHFRRTAHSAIRRVMGS 122 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 GAKG+ + VSG+L G E +RTE + +G + A+ ++ + A GV+GV V I Sbjct: 123 GAKGVSIIVSGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKI 181 Query: 203 FKGEI-LGGMAAVEQPE 218 K ++ L + E Sbjct: 182 MKPDVTLPDEITILSGE 198 >UniRef50_O28360 30S ribosomal protein S3P n=3 Tax=Euryarchaeota RepID=RS3_ARCFU Length = 229 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 3/187 (1%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A ++F V++++ E+ A + I R +VT+ RPG+VIGK G Sbjct: 1 MAVERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGR 60 Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 ++ L + + D Q+++ EV KPE +A+L+A + LER FRRA R + M Sbjct: 61 RIKALTEKLKDFGIENPQVSVDEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIM 120 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKV 200 GAKG ++E+SG+L +E ARTE + G + A+ + A GV+GV V Sbjct: 121 EAGAKGCEIEISGKLV-SERARTEKFVAGTIVHTGDPAESMVQKGFDIAIKKLGVLGVSV 179 Query: 201 WIFKGEI 207 I ++ Sbjct: 180 RIIPPDV 186 >UniRef50_B4S097 30S ribosomal protein S3 n=2 Tax=Alteromonas macleodii RepID=B4S097_ALTMD Length = 143 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 90/113 (79%), Positives = 99/113 (87%), Gaps = 1/113 (0%) Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 +LERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR+EWYREGRVPLHT RA Sbjct: 30 ADKLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTFRA 89 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 DIDY TSEA TTYG+IGVKVWIFKGE+LGG+ Q + PAAQPKK+ R ++ Sbjct: 90 DIDYATSEASTTYGIIGVKVWIFKGEVLGGLP-TTQEQAPAAQPKKKGRNAKR 141 Score = 73.0 bits (178), Expect = 8e-12, Method: Composition-based stats. Identities = 27/50 (54%), Positives = 35/50 (70%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA 50 MGQKVHP GIRLGI KPW STW+ANT ++AD L+ R+ + + + A Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADKLERRVMFRRAMKRAVQNA 50 >UniRef50_O26116 30S ribosomal protein S3P n=6 Tax=Euryarchaeota RepID=RS3_METTH Length = 258 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 8/209 (3%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 K+F ++ +YL KEL +A + ++ V ++ RPG+VIG+ G+ V Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 + + + + + Q+ + EV PEL+ K++A I + L+R + FRR ++ M Sbjct: 63 AITQKLKNKFDLENPQVEVKEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIMAA 122 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVKVWI 202 GA+G++V +SG++ GA A T + +G + + + + GV+GV V I Sbjct: 123 GAQGVEVTISGKIRGARSA-TAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVRI 181 Query: 203 FKGE-ILGGMAAVEQP---EKPAAQPKKQ 227 + +L +E P E PA + + Sbjct: 182 MPPDVVLPDKVEIEDPRVTETPAEEASEA 210 >UniRef50_B3V6P6 Ribosomal protein S3 n=1 Tax=uncultured marine group II euryarchaeote KM3-130-D10 RepID=B3V6P6_9EURY Length = 367 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 4/205 (1%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 + F VR+YL +E +A + R + +VT+ + G VIG++G+ + + Sbjct: 8 RAFIHRNVERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHE 67 Query: 87 LRKVVAD-IAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 L++ + + +++ EV + L A+++A + S LER FRRA QN M G Sbjct: 68 LQRRLQNDFILENPHLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMDAG 127 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVKVWIF 203 A+G V +SG++ G R E +++G + A +D S A G IG V I Sbjct: 128 ARGCLVILSGKITGP-RHRVEKFQQGHIKFCGETALEFMDTGFSTAVKKLGTIGCTVRIM 186 Query: 204 KGEILGGMAAVEQPEKPAAQPKKQQ 228 + + + P + Sbjct: 187 RPGVKLPHEITITERVDSGLPPLAE 211 >UniRef50_Q9G889 Ribosomal protein S3 n=1 Tax=Malawimonas jakobiformis RepID=Q9G889_9EUKA Length = 215 Score = 162 bits (411), Expect = 8e-39, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 12/213 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS--VSRIVIE 58 MGQ ++ G+ L K W S W+ N + +L D +R Y+ + + VI+ Sbjct: 1 MGQSINTTGLLLTHNKYWQSKWY-NDNNYIFSLYEDILIRNYIKNVFKNLNLFYGKCVIK 59 Query: 59 RPAKSIRVTIHTARPGI--VIGKKGE----DVEKLRKVVADIAGVPAQINIAEVRKPEL- 111 R + I + I+ + +I K + + +++++++ + + I ++ + Sbjct: 60 RSIQKIYIYINIYKKKRKNIINTKDKRKLINKKEIKQILQSLTKLTNNRIILIIKPTNIF 119 Query: 112 DAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK--GIKVEVSGRLGGAEIARTEWYR 169 DA+L+A I+ +LE R F K+ + + G +++ SGR G ++A +W++ Sbjct: 120 DAQLLAQYISRKLEIRNSFLSIFKKILNKINKNKKIYKGFRIQCSGRPNGNDMAYIQWFK 179 Query: 170 EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 G++PLHT IDY + A T YG+ GVKVW+ Sbjct: 180 YGQIPLHTYNYKIDYAYTTALTKYGLSGVKVWL 212 >UniRef50_Q673S3 Ribosomal protein S3 n=4 Tax=environmental samples RepID=Q673S3_9EURY Length = 307 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 92/185 (49%), Gaps = 4/185 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 + F + VR+YL +E +A + R + +VT+ + G VIG++G+ + + Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68 Query: 87 LR-KVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 L+ ++ +D ++ + E+ +P L+A+++A + S LER FRRA QN M G Sbjct: 69 LQYRLKSDFKLENPRLEVNEIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAG 128 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVKVWIF 203 A+G + +SG++ G R + +++G + A +D S A G +G V I Sbjct: 129 ARGCLIILSGKISGP-RHRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLGTVGCTVRIM 187 Query: 204 KGEIL 208 + + Sbjct: 188 RPGVK 192 >UniRef50_A2BMC5 30S ribosomal protein S3P n=10 Tax=Thermoprotei RepID=RS3_HYPBU Length = 247 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 4/197 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 + F ++ +YL K +A + + I + RV I+ RP ++IG++GE + Sbjct: 5 KRYFIKKAMVQTQIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIR 64 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 +L + G+ QI + V P+L+A++VA I LER +RR + + Sbjct: 65 QLAAIFEHEFGLSNPQITVRRVENPDLNARVVASRIAVLLERGAYYRRVANVMARRVLNA 124 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 GA G+++ +SG+L E AR E R G+V H + +D GV+G++V I Sbjct: 125 GAIGVQIVISGKLR-TERARYEKVRRGKVYTTGHQVEYMVDRAVMHVTLKPGVLGIEVMI 183 Query: 203 FKGEILGGMAAVEQPEK 219 K ++QPE+ Sbjct: 184 VKPAKPSDYVRIKQPEE 200 >UniRef50_Q9YF78 30S ribosomal protein S3P n=1 Tax=Aeropyrum pernix RepID=RS3_AERPE Length = 246 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 4/196 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K F + K+ ++L + +A SR+ + + + +TI RP ++IG++G + + Sbjct: 7 KHFLNQGLLRTKIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIGRRGATIRR 66 Query: 87 LRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 L++V + G+P +I + + P LDA++ A I +ER + FRR A+ M G Sbjct: 67 LQEVFQTVFGLPNPRIRVEQPENPMLDARVQAFRIARSIERGIHFRRVAFAAINRIMSNG 126 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 A G+++ +SG+L +E AR E ++ G+V H + +D ++ A GVIGV V I Sbjct: 127 ALGVEITISGKLT-SERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKGVIGVDVIIV 185 Query: 204 KGEILGGMAAVEQPEK 219 K G ++ E+ Sbjct: 186 KPGKPGDHVRIKSEEE 201 >UniRef50_A3DNB3 30S ribosomal protein S3P n=2 Tax=Desulfurococcaceae RepID=RS3_STAMF Length = 224 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 4/198 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 F D + ++L A + + + + RV I+ PG +IG+ G + Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 KL ++ G+ I ++ V P+L+A++VA I LE+ + +RR ++ M Sbjct: 67 KLMTIMQTHFGLENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEA 126 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 GA G ++ +SG+L +E AR E + GR+ D +D +A GV GV+V I Sbjct: 127 GAVGAEIIISGKLR-SERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVI 185 Query: 203 FKGEILGGMAAVEQPEKP 220 + + + KP Sbjct: 186 VRPHLKPPDYVEIKSVKP 203 >UniRef50_A4YCX2 30S ribosomal protein S3P n=3 Tax=Sulfolobaceae RepID=RS3_METS5 Length = 240 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 4/183 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 K F + V ++L KE A + I + RVTI+ RP I+IGK G+ ++ Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 +L +++ + QI + + KPEL+A+++A + LE+ FRRA ++ M Sbjct: 65 RLAQILEKYFNLENPQITVTQPEKPELNARVMAFRLAVTLEKGYHFRRAAFMTIRRIMNA 124 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVKVWI 202 GA G +V VSG++ +E A+ E +EG V + L +D + A G+ GV+V I Sbjct: 125 GALGAEVIVSGKIT-SERAKFEKLKEGIVYKTGNNLDVMVDRAIAIATLKMGIYGVEVVI 183 Query: 203 FKG 205 K Sbjct: 184 TKP 186 >UniRef50_B3V6F1 Ribosomal protein S3 n=2 Tax=environmental samples RepID=B3V6F1_9EURY Length = 400 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 8/186 (4%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIER----PAKSIRVTIHTARPGIVIGKKGE 82 + F D VR+YL KE +A + ER + +VT+ R G+VIG++G+ Sbjct: 8 RHFVDRNVERQLVREYLLKETERAGFGGLHFERAFDQTSICTKVTLQAERVGMVIGRRGK 67 Query: 83 DVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 + +L++ + + ++ + E+ P L+A+++A + S LER FRRA +V N Sbjct: 68 VINELQRRIRTDFNLENPKLQVEEIENPALNAQVMASKLASALERGWYFRRAGHSSVLNV 127 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVK 199 + GAKG + ++G+L G+ RTE + +G + A +D + A G IG Sbjct: 128 IEAGAKGCLIIIAGKLTGS-RHRTEKFLKGHIKFCGETALTHMDVGQATAVVKLGTIGCT 186 Query: 200 VWIFKG 205 V I K Sbjct: 187 VAIMKP 192 >UniRef50_A8AA20 30S ribosomal protein S3P n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=RS3_IGNH4 Length = 241 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 K F + + KV +YL + S++ +++ RV I+ R G +IG++G+ ++ Sbjct: 9 KKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIK 68 Query: 86 KLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 ++ KV+ + G+P Q+ + +V +PELDA+++A + + L+R FRRA ++ M Sbjct: 69 QITKVLEEWFGIPNPQVTVVKVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIMGA 128 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 GA G +V+VSG+L G E AR E Y G+V + + D + GV GV+V I Sbjct: 129 GAIGAQVKVSGKLRG-ERARFEKYIAGKVYKSGNQVVRLTDRAIAHVLLKVGVEGVEVII 187 Query: 203 FKG---EILGGMAAVEQPEK 219 K E ++ PE+ Sbjct: 188 SKKSEEERPDDEVRIKSPEE 207 >UniRef50_Q9HIR5 30S ribosomal protein S3P n=3 Tax=Thermoplasmatales RepID=RS3_THEAC Length = 225 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 8/211 (3%) Query: 25 NTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDV 84 ++F + V +Y+ KE A +V++R +T++ RPG+VIG++G V Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61 Query: 85 EKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR 143 +++ + G+ QI + +V+ P+L+ ++A I LE+ +R+A ++ ++ Sbjct: 62 QQMTDTLEKKYGIETPQIEVKDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRTIQ 121 Query: 144 LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVW 201 GAKG+ +++SG++ G E AR + + G V + S A G++GV V Sbjct: 122 AGAKGVLIKISGKISG-ERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTVK 180 Query: 202 IFKGEILGGMA----AVEQPEKPAAQPKKQQ 228 I E + E+ + K Q Sbjct: 181 ILNPEYKLPDVFSIENITGGEEVGTESKADQ 211 >UniRef50_A1RXG6 30S ribosomal protein S3P n=1 Tax=Thermofilum pendens Hrk 5 RepID=RS3_THEPD Length = 202 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 4/193 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 ++ + +YL ++L +A+ + +V ++ PG+VIG+KG +++ Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65 Query: 87 LRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 + +V+ G+ QI++ EV +L+AK++A + L R V FRRA A+ M G Sbjct: 66 IAEVLEREFGIENPQIDVVEVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAG 125 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWIF 203 A+G ++ +SG+L ++ RTE + G VP + +D G+ GVKV I Sbjct: 126 ARGAEIVISGKLT-SQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIM 184 Query: 204 KGEILGGMAAVEQ 216 K + ++ Sbjct: 185 KPAKMPDTILIKG 197 >UniRef50_B2X260 30S ribosomal protein S3, chloroplastic n=1 Tax=Floydiella terrestris RepID=B2X260_9CHLO Length = 611 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 101/173 (58%), Gaps = 7/173 (4%) Query: 41 QYLTKELAKASVSRIVIERPAKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPA 99 + + ++ +SR + +R K+ I +++ + KK D E + IA + Sbjct: 435 NNVQNKKYQSLISRAIQKRMKKNLILMSLRNRFDKVANFKKVYDTENFTTLCEKIAKIQT 494 Query: 100 -----QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL-GAKGIKVEV 153 I V+ P L A +A+ I +L++R FR +MK+A ++AM+ G KGIK+++ Sbjct: 495 FPKITSIEFVSVKTPTLYAVCLANFIVEKLQKRFSFRGSMKKAKEDAMKTPGIKGIKIQI 554 Query: 154 SGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 +GRL GAEIARTEW R GRVPL TL+A IDY+ A T YG++GVKVW+FK Sbjct: 555 AGRLNGAEIARTEWMRAGRVPLQTLKAKIDYSYKTASTIYGILGVKVWLFKDN 607 Score = 83.0 bits (204), Expect = 6e-15, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSR------ 54 MGQK+HP G R+GI + + WFA+ ++ + DF +R+ L K L ++ + Sbjct: 1 MGQKIHPFGFRVGITQKHYARWFASPDKYPQYVLEDFLIRKSLYKLLPPENLPKKMEDSG 60 Query: 55 ------IVIERPA-KSIRVTIHTARPGIV 76 I IER +I++ I+ PG Sbjct: 61 KMRVVHIKIERFLRNTIQIKIYAVNPGAF 89 >UniRef50_Q8W9Q9 Ribosomal protein S3 n=1 Tax=Mesostigma viride RepID=Q8W9Q9_MESVI Length = 210 Score = 152 bits (385), Expect = 8e-36, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 21/217 (9%) Query: 1 MGQKVHPNGIRLG-IVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK---ASVSRIV 56 MGQK +P +R + S W+ + K ++ L DF +R Y+ K L ++ ++I Sbjct: 1 MGQKSNPQALRTAAPYQQHESCWYHD-KYYSHLLSQDFMIRSYIEKRLKGCFPSASAKIF 59 Query: 57 IERPAKSIRVTIHTARPGIV--IGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAK 114 + K +++ I + + + KK D+ K+ K ++ I +++ A Sbjct: 60 LSSSPKELKLRIFSHGHLFLKRLKKKSYDISKILKKSSNTTSF--SIQCYQIKNEYKSAL 117 Query: 115 LVADSITSQLERRVM-------FRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEW 167 +A+ +T ++R+ M F R + A KGI+V GR G+E R + Sbjct: 118 FLANLLTQAIKRKKMMSLPSLLFLRTINEA-----SDFIKGIRVSCVGRFKGSERTRKKK 172 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 ++ G LHT I+Y++ T+YG GVKVW+ Sbjct: 173 FQWGSTSLHTFSEKIEYSSQSISTSYGTFGVKVWVCY 209 >UniRef50_B3T598 Putative ribosomal protein S3, C-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T598_9ZZZZ Length = 214 Score = 152 bits (385), Expect = 8e-36, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 5/203 (2%) Query: 31 DNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKV 90 + D + +YL K + A I R+TI+ +PG+VIG++G + +L + Sbjct: 3 EKFSRDSGIDEYLEKNIESAGYGGFEIITSPVGTRITIYVTKPGLVIGRRGIGIRELTEN 62 Query: 91 VADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGI 149 + I + QI++ EV PE +A+++ + + + R FRRA V MR GA G Sbjct: 63 LEKIFELQNLQISVFEVEIPEQNARIMCNRVAQTVARGTAFRRAAMWTVNAIMRSGALGA 122 Query: 150 KVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI-FKGE 206 ++ ++G+L +E + TE Y++G VP A + S+ G+ G++V I + Sbjct: 123 EIIIAGKLR-SERSHTEKYKDGVVPKTGYPATLTVREAVSDVKLKMGLYGIQVKIAIRDM 181 Query: 207 ILGGMAAVEQPEKPAAQPKKQQR 229 + M ++ EK ++ ++ ++ Sbjct: 182 VPPDMELIKDIEKERSEKERSEK 204 >UniRef50_Q1RU61 Bacterial ribosomal protein S3 n=1 Tax=Medicago truncatula RepID=Q1RU61_MEDTR Length = 158 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 24/177 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK----ASVSRIV 56 MGQK+HP G RLG +S WFA K +++NL D +R + + K + RI Sbjct: 1 MGQKIHPFGFRLGTTPNHDSIWFAQPKNYSENLKEDKIIRDCIKNYIQKTSGVEGIGRIK 60 Query: 57 IERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLV 116 I++ I+ + + L + I I + D ++ Sbjct: 61 IKKRINLIQTNVQ---------------KNL-----NCVTRKINITITRIPNTYSDPNIL 100 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 A+ I QL+ R+ FR+A+K+A++ A + KG++V+++GR+ G EIA EW REG V Sbjct: 101 AEFIAGQLKNRISFRKAIKKAIELAEQTCTKGVQVQIAGRIDGKEIACVEWIREGDV 157 >UniRef50_Q05FJ0 30S ribosomal protein S3 n=2 Tax=Candidatus Carsonella ruddii RepID=RS3_CARRP Length = 203 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRI-VIER 59 MG+K++P RL ++S W+ K F L D +R+ + + ++S I +I Sbjct: 1 MGKKINPILFRLKKNTVYHSLWYTFKKNFCYYLKCDILIREIIRRNFLFINLSYIDIIIS 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 +I + I+ +I ++ ++ I +N V L+AK +A + Sbjct: 61 NKLTINLYINNVDQFNIIE---NYLDVFVFQISKILKKNVILNF--VFNHVLNAKNIAYN 115 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 + +Q+ + ++ +K + + G K+++SGRL G +IAR EW GR+PLHT++ Sbjct: 116 VVNQILNKNSIKKIIKEELLKNRKNF--GCKIQISGRLEGVDIARKEWSLIGRIPLHTIK 173 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGE 206 +++Y E T YG++GVK+W+FK Sbjct: 174 YNLEYYQCETLTQYGILGVKIWLFKKN 200 >UniRef50_Q85UK5 30S ribosomal protein S3, chloroplastic (Fragment) n=1 Tax=Orobanche minor RepID=Q85UK5_OROMI Length = 166 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 11/166 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--------ASV 52 M QK++P RLG + +S WF K+++++L D K+R + + K + Sbjct: 1 MAQKINPLVFRLGTTQNHHSLWFVQAKKYSESLQEDQKIRNLIKNYVQKKVSNSSDIEGI 60 Query: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA---GVPAQINIAEVRKP 109 + I I++ I+V I P ++I +E+L+ + I I + KP Sbjct: 61 APIEIKKRIDLIQVIIFMGFPKLLIESIPRGIEELQMNLQKEFHYVNRKFNIAITRITKP 120 Query: 110 ELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSG 155 + ++A+ I +QL RV FR+AMK+A++ + KGI+V++SG Sbjct: 121 YRNPNIIAEFIANQLNNRVSFRKAMKKAIELTEQANTKGIQVQISG 166 >UniRef50_UPI000038E231 30S ribosomal protein S3P n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E231 Length = 228 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 4/206 (1%) Query: 25 NTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDV 84 K+F + V +YL E A + ++R +T++ RPG+VIG+ G + Sbjct: 8 KEKKFVSDNIKKLLVTEYLQSENDSAGFGGMDMKRTPFGTNITLYVNRPGLVIGRHGSKI 67 Query: 85 EKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR 143 + + ++ G+ QI + EV +L+ ++++ I LE+ +R+A ++ + Sbjct: 68 KAMTSILETKYGLESPQIEVKEVENADLNPQVISKKIALSLEKGWNYRKAGNTTLRRIID 127 Query: 144 LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL--RADIDYNTSEAHTTYGVIGVKVW 201 A+G+ + + G++ G E ART+ + G + RA + S A G IG+ V Sbjct: 128 QHARGVLIRIGGKISG-ERARTQKFMYGEIKYSGEPARAGVITGYSVAMLKTGAIGIYVR 186 Query: 202 IFKGEILGGMAAVEQPEKPAAQPKKQ 227 + + + E+ P K+ Sbjct: 187 LLRQDYHLPDEISINTERKIPVPDKK 212 >UniRef50_Q06SI4 30S ribosomal protein S3, chloroplastic n=112 Tax=cellular organisms RepID=RR3_STIHE Length = 1126 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 6/133 (4%) Query: 79 KKGEDVEKLRKVVADIAGVPA-----QINIAEVRKPELDAKLVADSITSQLERRVMFRRA 133 K DV+ K+ ++ + I + +V +P+ A +A+ + LE+R FR Sbjct: 987 KNIYDVKTFAKLCENLTNLQTMPKVSVIELVKVHQPKQYAVCLANFVVENLEKRFSFRST 1046 Query: 134 MKRAVQNAMR-LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTT 192 MKRA + AM KGIK+++SGRL GAEIARTEW R+G VPL TLRA+IDY+ A T Sbjct: 1047 MKRASEQAMSTANVKGIKIQISGRLNGAEIARTEWLRDGVVPLQTLRANIDYSYKTAKTI 1106 Query: 193 YGVIGVKVWIFKG 205 YG++GVKVW+FK Sbjct: 1107 YGILGVKVWLFKD 1119 Score = 81.5 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 42/72 (58%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G R+GI +P ++ WFANT ++ + DF +RQ L K L ++ R E Sbjct: 1 MGQKIHPYGYRVGITQPHSARWFANTYQYPQYVFEDFLLRQSLFKNLPVENLPRKRTEDK 60 Query: 61 AKSIRVTIHTAR 72 +++ V I R Sbjct: 61 SETKLVQIKIER 72 >UniRef50_Q5QJE0 Ribosomal protein S3 n=20 Tax=Spermatophyta RepID=Q5QJE0_CYCRE Length = 579 Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 9/194 (4%) Query: 32 NLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKG---EDVEKLR 88 NL KV + + K + + + + I I R G + +V+K+R Sbjct: 386 NLLGKEKVIKLMEKLIDLGGIG--ELIKGIGMIDAIILRNRSGRIPYGYNYYLNEVQKMR 443 Query: 89 KVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV-MFRRAMKRAVQNA---MRL 144 +++D I ++ A L+A I+ QL FR + V++ M Sbjct: 444 SLLSDGTNTNTSIGSVKIESVYQSASLIAQDISFQLRNGTGSFRSIFGQIVRDITFVMPK 503 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 KGI++ SGRL GAEIARTE G+ + IDY +++ T YG++GVKVWI Sbjct: 504 RVKGIRICCSGRLKGAEIARTECREYGKTSCNVFDHKIDYASAKVCTRYGILGVKVWISY 563 Query: 205 GEILGGMAAVEQPE 218 G A E + Sbjct: 564 SNERKGRAISETYK 577 Score = 44.9 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 34/75 (45%), Gaps = 7/75 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M ++V+P +RL + + +S+WF++ + + D +R Y T++ + R Sbjct: 1 MAREVNPISVRLNLNRSSDSSWFSD-YYYGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 IVIERPAKSIRVTIH 69 +I K + + Sbjct: 60 CIIHHFTKRTFIHLF 74 >UniRef50_D2DX66 Ribosomal protein S3 n=2 Tax=Taxaceae RepID=D2DX66_TORCL Length = 802 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR-VMFRRAMKRAVQN 140 +V K+R +++ I ++ A +A I+SQL FR R V++ Sbjct: 675 NEVRKMRSLLSGGTNANTSIGSVKIESVYQSASPIAQDISSQLRDGTRSFRSIFGRIVRD 734 Query: 141 A---MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 197 M G GI++ GRL GAEIARTE G+ + R IDY ++ T YG++G Sbjct: 735 IPLVMPKGVGGIRICCPGRLKGAEIARTECREYGKTSCNAFRHQIDYAYAKVSTRYGILG 794 Query: 198 VKVWI 202 VKVWI Sbjct: 795 VKVWI 799 >UniRef50_A6YEA6 Ribosomal protein S3 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEA6_CHLAT Length = 736 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Query: 85 EKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 ++ ++++ I ++++P A+LVA I +LE+R FR+ ++ +++ R Sbjct: 615 NHIKSIISNGTLCHTSIRPVKIKEPFKSAELVAQDIAFKLEKRESFRKISRQIIKDIKRC 674 Query: 145 G-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 +GI++ +GR GAE+AR E R G+ LH IDY++ A+T YG+ GVKVWI Sbjct: 675 KYVEGIRITCAGRFNGAEMARVESRRFGQTSLHVFSKKIDYSSKTAYTPYGLFGVKVWIS 734 Query: 204 K 204 Sbjct: 735 Y 735 Score = 60.3 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 15/177 (8%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELA--KASVSRIVIE 58 MGQK +P +R + + +S W+ N +A+ L D +R Y L K + R +++ Sbjct: 1 MGQKTNPISVRNQLNRAPDSCWY-NDYNYANLLFHDLNLRSYYQSLLRLIKLNSGRCILQ 59 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVV--ADIAGVPAQINIAEVRKPEL----D 112 K + + + KKG + LR + +P + + +R L + Sbjct: 60 ISPKKVSLVFFYSNNLTYQSKKGTPILPLRGSFLPLRGSFLPLRGSFLPLRGSFLPLRGN 119 Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEV-----SGRLGGAEIAR 164 + A I + + RR + + R G + K+ + GR+ +E R Sbjct: 120 FRAAAQ-IGEKGKEDESNRRGVDGNILPTHRFGQRAGKLSLLVIANKGRITKSESHR 175 >UniRef50_B1L650 Ribosomal protein S3 n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L650_KORCO Length = 251 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 96/196 (48%), Gaps = 4/196 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+F +K+ +++ K KA + I +T++ PG++IG+ G ++ Sbjct: 11 KKFVQEGIVKYKLHEFMEKISDKAGFHGVEISSTPIRDIITVYVESPGVMIGRGGRTSKR 70 Query: 87 LRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 + ++ + G+ I +V KP L ++VA I ++ + +++ A+ M G Sbjct: 71 ISDILKEELGIQNPYIQAKKVDKPFLSTRIVASYIARRIAKGERYKKVAYSALGRVMAEG 130 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVKVWIF 203 AKG+++ +SG+ G++ AR E +REG + +++Y G+IGV+V I Sbjct: 131 AKGVEIRLSGKF-GSQRAREERFREGVIYRCGQDYIENVEYAVKHVLMPQGMIGVRVRIV 189 Query: 204 KGEILGGMAAVEQPEK 219 K + G A V + ++ Sbjct: 190 KPGVRGPDAVVIKEDE 205 >UniRef50_P48153 40S ribosomal protein S3 n=10 Tax=Eukaryota RepID=RS3_MANSE Length = 243 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 17/216 (7%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + ++F + ++ ++LT+ELA+ S + + + I R V+G+KG Sbjct: 7 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRR 66 Query: 84 VEKLRKVVADIAGVPAQ---INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 + +L VV +P Q + +V L A A+S+ +L + RRA ++ Sbjct: 67 IRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRF 126 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDY---NTSEAHTTYGVIG 197 M GA+G +V VSG+L G + A++ + +G + +H+ DY T GV+G Sbjct: 127 IMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLG 184 Query: 198 VKVWIFKGEILGGMAAVEQPEKP------AAQPKKQ 227 +KV I + P+KP +PK + Sbjct: 185 IKVKIM---LPWDQQGKNGPKKPQPDHILVTEPKDE 217 >UniRef50_P23396 40S ribosomal protein S3 n=252 Tax=root RepID=RS3_HUMAN Length = 243 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 9/203 (4%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + ++F + ++ ++LT+ELA+ S + + + I R V+G+KG Sbjct: 6 SKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRR 65 Query: 84 VEKLRKVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 + +L VV G P ++ +V L A A+S+ +L + RRA ++ Sbjct: 66 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGV 198 M GAKG +V VSG+L G + A++ + +G + + +D GV+G+ Sbjct: 126 IMESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184 Query: 199 KVWIFKGEILGGMAAVEQPEKPA 221 KV I + P+KP Sbjct: 185 KVKIM---LPWDPTGKIGPKKPL 204 >UniRef50_D2DX72 Ribosomal protein S3 n=1 Tax=Cephalotaxus sinensis RepID=D2DX72_9CONI Length = 763 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR-VMFRRAMKRAVQN 140 +V K+R +++ I ++ A +A I+ QL FR + V++ Sbjct: 636 NEVRKMRSLLSGGTNANTSIGSVKIESVYQSASSIAQDISFQLRDGTRSFRSIFGQIVRD 695 Query: 141 A---MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 197 M G GI++ SGRL GAEIARTE G+ + R IDY ++ T YG++G Sbjct: 696 IPLVMPKGVGGIRICCSGRLKGAEIARTECREYGKTSCNAFRHQIDYAYAKVSTRYGILG 755 Query: 198 VKVWI 202 VKVWI Sbjct: 756 VKVWI 760 >UniRef50_D2DX40 Ribosomal protein S3 n=4 Tax=Podocarpaceae RepID=D2DX40_9CONI Length = 618 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 3/124 (2%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 +V+K+R +++ I +++ A +A I+S+L R FR V++ Sbjct: 492 NEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSASPIAQDISSRLRDRKSFRSIFYEPVRDI 551 Query: 142 ---MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGV 198 M GI++ SGRL GAEIARTE G+ + R IDY ++ T YG++GV Sbjct: 552 PLVMLKRVGGIRICCSGRLKGAEIARTECMEYGKTSCNAFRHRIDYASARVSTRYGILGV 611 Query: 199 KVWI 202 KVWI Sbjct: 612 KVWI 615 Score = 44.9 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 8/77 (10%) Query: 3 QKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL-------TKELAKASVSRI 55 QKV+P +RL + + +S+WF++ + + D R Y + + R Sbjct: 42 QKVNPISVRLHLNRSSDSSWFSD-HYYGKLVYQDVNPRDYFGSIRPPTRRNPFGFRLGRC 100 Query: 56 VIERPAKSIRVTIHTAR 72 ++ K + + R Sbjct: 101 ILHHSPKRAFIHLFLPR 117 >UniRef50_Q1KVX7 30S ribosomal protein S3, chloroplastic n=3 Tax=cellular organisms RepID=RR3_SCEOB Length = 700 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 64/142 (45%), Positives = 82/142 (57%), Gaps = 5/142 (3%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELD----AKLVADSITSQLERRVMFRRAMKRA 137 E ++K R + + +I+I D A VADSI LE+R FR +K+A Sbjct: 553 EQLQKQRTICEKNIQLTPKISIQFYSVKAQDFQTRASAVADSIVDDLEKRKAFRGVIKKA 612 Query: 138 VQNAMRL-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVI 196 ++ MR KG+K++VSGRL GAEIAR+EW R GRVPL TLRA+IDY A T YG+I Sbjct: 613 KEDLMRTPKVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANIDYCYKTAQTIYGII 672 Query: 197 GVKVWIFKGEILGGMAAVEQPE 218 GVKVWI+KG P Sbjct: 673 GVKVWIYKGYTKTRKPTANSPS 694 Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 17/127 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFAN--TKEFADNLDSDFKVRQYLTKELAKAS------- 51 MGQK+HP G R+GI K S WFA ++A ++ D +R+ L K L + Sbjct: 1 MGQKIHPLGFRVGITKKHQSVWFARFHKHQYAQSVLEDRFLRKNLLKLLPQLFQKKLNNS 60 Query: 52 -----VSRIVIER--PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIA 104 +S I I R I + IH + I E +E V ++ + Sbjct: 61 PNMPKISHIQIVRGLIPYEIGIQIHAQNCHM-IKSAFEGLEVQPNFVHNLLKNHLILEKN 119 Query: 105 EVRKPEL 111 V+K L Sbjct: 120 SVKKTSL 126 >UniRef50_B2MWV7 Ribosomal protein S3 n=1 Tax=Hemiselmis andersenii RepID=B2MWV7_9CRYP Length = 219 Score = 139 bits (350), Expect = 8e-32, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 17/221 (7%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT------------KELA 48 MGQK+ N + L K WNS W+ + + D + YL K L Sbjct: 1 MGQKIVVNSLHLKKNKNWNSFWYVDFNAYLPVFREDLYLYLYLRSFSKLKYNILKRKHLY 60 Query: 49 KASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED---VEKLRKVVADIAGVPAQINIAE 105 + + + I R KS+ + + KK + +++L + + + Sbjct: 61 QIEIVKCFIYRIDKSLVLNLQLMGLKTKQLKKSDFPFFMKQLLIRLKNFFNYKNNRFVIY 120 Query: 106 VRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIART 165 + + A A + + LE+RV F+ M + + +L GI++ GRL + A Sbjct: 121 YKIGKSTALFTALRVATLLEKRVRFQSQMVKKI--IKQLNVAGIRISCKGRLNFVDRATK 178 Query: 166 EWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 G VPL T++A+IDY A+T G+ VKVWI E Sbjct: 179 AQLSSGSVPLQTIKANIDYGLIVANTKKGLQSVKVWILNKE 219 >UniRef50_P26865 Ribosomal protein S3, mitochondrial n=2 Tax=Marchantiophyta RepID=RT03_MARPO Length = 430 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 3/139 (2%) Query: 84 VEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR 143 ++K++ + ++ I ++ A L+A I+ +LE++ FR+ + + + Sbjct: 290 LKKMQSLFSNQTKTNTLIQPVKIASVYQSASLIAQEISWKLEQKKSFRQICRSIFKQIKK 349 Query: 144 L-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 KGI++ SGRL GAEIA+TE + G LH IDY ++A T YG++GVKVW+ Sbjct: 350 CPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGVKVWV 409 Query: 203 --FKGEILGGMAAVEQPEK 219 F + G A+ + K Sbjct: 410 SYFLTQKKGTSCAISKTYK 428 Score = 53.0 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 15/115 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS------VSR 54 M QKV+P +RL + + +S+WF++ + L D R Y + R Sbjct: 1 MAQKVNPISVRLNLNRSSDSSWFSD-YYYGKLLYQDLNFRDYFGSIRPPTGNTFGFRLGR 59 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGED------VEKLRKVVADIAGVPAQINI 103 +I K IH + + + V+ +R++ + ++ I Sbjct: 60 CIIHHFPKRT--FIHVFFLDRLSQSRHQGLGAIPSVKLIRRINDNTVKQRNEVGI 112 >UniRef50_A8B8Z2 Ribosomal protein S3 n=2 Tax=Giardia intestinalis RepID=A8B8Z2_GIALA Length = 217 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 6/188 (3%) Query: 28 EFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL 87 ++ ++ + ++ ++ ++EL A + + R SI V I A P +V+G + K+ Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75 Query: 88 RKVVADIAGVPA---QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 ++A I + ++ K L A+++ D++ ++LE + RRA ++ AMR Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRA 135 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 GA G +V V+G+L A+ AR ++EG + H R + T GVIGVKV I Sbjct: 136 GAAGCEVIVAGKLR-AQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKVRI 194 Query: 203 FKGEILGG 210 + I G Sbjct: 195 YNPNIRGA 202 >UniRef50_C0KT93 Ribosomal protein S3 (Fragment) n=50 Tax=Halimeda RepID=C0KT93_9CHLO Length = 276 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 20/162 (12%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI +P S W+A+ K ++ L D +R L K+ AKA +I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVAD------------------IAGVPAQI 101 ++ + + I +P ++IGKKGE+++KL + + + + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 102 NIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR 143 + V + + A +AD + LE+R+ ++ ++ + Sbjct: 121 EVY-VIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKK 161 >UniRef50_D2DWK6 Ribosomal protein S3 (Fragment) n=1 Tax=Gnetum montanum RepID=D2DWK6_9SPER Length = 684 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 9/138 (6%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR---VMFRRAMKRAV 138 +V K+R +++D ++ A L+A I+ QL R FR + V Sbjct: 538 NEVRKVRSLLSDRTNTNTFFGSVKIESVYQSASLIAQDISFQLRGRNRTRSFRSIFSQIV 597 Query: 139 QNAMR------LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTT 192 ++ G +GI++ SGRL GAEIARTE G+ ++ IDY +++ T Sbjct: 598 RDIPNPKVMPPKGVRGIRICCSGRLKGAEIARTECREYGKTSINVFCQKIDYASAKVSTR 657 Query: 193 YGVIGVKVWIFKGEILGG 210 YG++GVKVWI + G Sbjct: 658 YGILGVKVWISYSSVKGR 675 >UniRef50_Q1XG99 Ribosomal protein S3 n=1 Tax=Physcomitrella patens RepID=Q1XG99_PHYPA Length = 535 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Query: 85 EKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 +K++ +++ I ++ A L+A I+ +LE++ FR+ + Q + Sbjct: 414 KKMQFFLSNQTKTNTLIRPVKIASVYQSASLIAQEISWKLEQKKSFRQICRSTFQQIEKC 473 Query: 145 -GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 KGI++ SGRL GAEIA+TE + G LH IDY ++A T YG++GVKVW+ Sbjct: 474 QYVKGIRICCSGRLNGAEIAKTECRKYGETSLHVFSDQIDYAKAQASTPYGILGVKVWVS 533 Query: 204 K 204 Sbjct: 534 Y 534 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 10/115 (8%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M QK++P +RL + + +S+WF++ + L D R Y T + + + Sbjct: 1 MAQKINPISVRLNLNRSSDSSWFSD-YYYGKLLYQDVNFRDYFDLIRPPTGKTFGFRLGK 59 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKV-VADIAGVPAQINIAEVRK 108 +I K IH + + + ++ V + +I EV+ Sbjct: 60 FIIHHFPKRT--FIHVFFLDRLSRSRHTGLGAIQSVKLIRRIDDATEIQRNEVKS 112 >UniRef50_D2DX63 Ribosomal protein S3 n=1 Tax=Sciadopitys verticillata RepID=D2DX63_SCIVE Length = 786 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 3/162 (1%) Query: 43 LTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN 102 + K + + + + I + + R +V K+R +++D I Sbjct: 623 VEKFIDLGGIGGL-MRGIGMMIGIILKNRRIPYAYNYYLNEVRKMRSLLSDRTNTHTFIG 681 Query: 103 IAEVRKPELDAKLVADSITSQLERR-VMFRRAMKRAVQNAMR-LGAKGIKVEVSGRLGGA 160 ++ A +A I+ +L R FR + V+ R G +GI++ SGR GA Sbjct: 682 SVKIESVYQSASPIAQDISLKLRDRTRSFRSIFNQIVREMPRGQGVRGIRICCSGRSKGA 741 Query: 161 EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 EIARTE G+ + IDY ++ T YG++GVKVWI Sbjct: 742 EIARTECREYGKTSCNAFCHKIDYAYAKVSTRYGILGVKVWI 783 Score = 44.9 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL 43 M KV+P +RL + + +S+WF++ + + D +R+Y Sbjct: 1 MAPKVNPISVRLHLNRSSDSSWFSD-YYYGQFMYQDVNLREYF 42 >UniRef50_A3MTL3 30S ribosomal protein S3P n=2 Tax=Thermoproteaceae RepID=RS3_PYRCJ Length = 216 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 8/203 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+ + + ++++L LAK I + R+ I+ RP +IG+KG V++ Sbjct: 12 KKILEENKKKWMIKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71 Query: 87 LRKVVADIAGVPA----QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 + ++A+ GV I+++++ PEL K+VA I + + R V FRR M AV+ M Sbjct: 72 VSSILANKLGVENPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQLM 131 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKV 200 GAKG ++ VSG+L E A+ E G++ A + G+ G++V Sbjct: 132 EAGAKGFEIVVSGKLS-TERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 190 Query: 201 WIFKGEI-LGGMAAVEQPEKPAA 222 I + ++ P +P A Sbjct: 191 RITPATLRYSDEYKIKPPTRPEA 213 >UniRef50_Q8TX35 30S ribosomal protein S3P n=1 Tax=Methanopyrus kandleri RepID=RS3_METKA Length = 227 Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 6/198 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+F ++ +YL +EL +A + ++R + ++ + RP I IG++G ++ + Sbjct: 12 KKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRR 71 Query: 87 LRKVVADIA--GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 + + V + I + E+ PEL+ ++VA + S LER + FRRA A++ M Sbjct: 72 VEEEVQERFPLLGRVSIEVKELPSPELNPRVVARRLASALERGIHFRRAAYGALRRIMNA 131 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 GAKG + +SG+L GA ARTE + EG V D + +A T G IGV V I Sbjct: 132 GAKGAMIILSGKLIGA-RARTEKFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRI 190 Query: 203 FKGEI-LGGMAAVEQPEK 219 ++ L + PE+ Sbjct: 191 MPPDVELPDELEIRPPEE 208 >UniRef50_B2X1Z6 30S ribosomal protein S3, chloroplastic n=1 Tax=Oedogonium cardiacum RepID=B2X1Z6_OEDCA Length = 596 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 27/214 (12%) Query: 14 IVKPWNSTWFANTKEFADNLDS-------DFKVRQYLTKELAKASV-SRIVIERPAKSIR 65 K S ++++ + A L ++ E+ K ++ + V++R ++ Sbjct: 382 TSKKKKSAYYSSFRNLAQKLYLQRKKNYHKKQIEDLKKNEVKKENIKLKKVVKRKIQNFM 441 Query: 66 VTIHTARPGIVIGKKGEDVEKLRKV--------------VADIAGVPAQINIAEVRKPEL 111 + + + + K + KL + + + + I I EV++P Sbjct: 442 ID-NLLKNNV---SKNSECYKLSSIYQAKVFEDLIKQLALRNSFPKISAIEIIEVKQPSE 497 Query: 112 DAKLVADSITSQLERRVMFRRAMKRAVQNAMR-LGAKGIKVEVSGRLGGAEIARTEWYRE 170 A +A IT +LE+R FR MK+A + A++ KGIK+++SGRL GAEIARTEW RE Sbjct: 498 YAVCLAYFITQKLEKRFSFRSIMKQAKRVAIQTSSVKGIKIQLSGRLNGAEIARTEWIRE 557 Query: 171 GRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 GRVPL TL AD+DY+ A T YG+IGVKVW+F+ Sbjct: 558 GRVPLQTLEADVDYSYKTAQTLYGIIGVKVWVFR 591 Score = 77.3 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 13/88 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL------------A 48 MGQK+HP G R+GI K + WFAN+ ++ + D +R+ LT + Sbjct: 1 MGQKIHPLGFRVGITKKHKAKWFANSDQYPQYILEDILLRKRLTSLIAPESLPRVFEDDK 60 Query: 49 KASVSRIVIERPAKS-IRVTIHTARPGI 75 K + + IER ++ I++ ++ P + Sbjct: 61 KMRIVEVKIERFIQNTIKIQMYAVNPDL 88 >UniRef50_O21249 Ribosomal protein S3 n=1 Tax=Reclinomonas americana RepID=O21249_RECAM Length = 287 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 108/275 (39%), Gaps = 72/275 (26%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKE--LAKASVSRIVIE 58 MGQKV+P +R+G+ + W+S W ++ K++ L+ D +R ++ + + ++ I Sbjct: 1 MGQKVNPISLRIGVNQMWDSRW-SHDKKYGKYLEQDLLIRSFIEDLCGYQEIFIGKLSIW 59 Query: 59 RPAKSIRVTIH-----TARPGIVI---------------GKKGEDVEKLRKVVADIAG-- 96 R +T++ T +P + I +K E + L + + Sbjct: 60 RSCSMNSLTVNLTDTNTVKPNLFIYFQMYVPYKTYSTNKEQKQEWLSNLENTIYNYLEDR 119 Query: 97 VPAQINIAEVRKP----------------ELDAKLVADSITSQLERRVMFR--------- 131 NI+ + P E+D D I L + + Sbjct: 120 FRNTFNISLLIDPIFEENSGDSKRSKQKTEIDFTFNNDVIKWLLNKDCLMISQWIANEFQ 179 Query: 132 ---------RAMKRAVQNA------MRLGAKGIKVEVSGRLGGAE-------IARTEWYR 169 R +++ + ++ GIK+ SGR + +AR + ++ Sbjct: 180 KRKGLKEVCRIIEKCFDHIKTEAIDLKYRIDGIKITCSGRFKMTDNEKRRNKMARIKTFK 239 Query: 170 EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 +G++PL TL I+Y+ + A+T G G+KVWI Sbjct: 240 KGQIPLQTLSKHINYHLATAYTPDGTSGIKVWISY 274 >UniRef50_C7DIC2 Ribosomal protein S3-domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIC2_9EURY Length = 207 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 103/199 (51%), Gaps = 5/199 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 + F D+ + ++L EL+KA SR+ I++ R+T++ PG VIG+ G+ ++ Sbjct: 4 ERRFIDDAIIKLNISKFLGTELSKAGFSRVEIQKTPIITRITVYVLNPGRVIGRGGKAID 63 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 L + + V +I++ EV+ ++ LVA I +LER + R+ ++ +++ M Sbjct: 64 DLTETIKSRFNVNNPRISVVEVQNKMIEPLLVAKDIAFKLERGINPRKIIQFTLKSIMEN 123 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYRE--GRVPLHTLRAD-IDYNTSEAHTTYGVIGVKVW 201 GA G ++ +SG+L A+ AR + R+ G +P + ++ + A+ YG IGV V Sbjct: 124 GALGAEIIISGKLA-AKGARAKSIRKSVGYIPKAGDVINLVNKGVATAYPKYGAIGVVVR 182 Query: 202 IFKGEILGGMAAVEQPEKP 220 I + +++ E P Sbjct: 183 IVPPGTVFPDREIKKVEIP 201 >UniRef50_D2DXC4 Ribosomal protein S3 n=9 Tax=Cupressaceae RepID=D2DXC4_THUDO Length = 613 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR-VMFRRAMKRAVQN 140 +V K+R +++ I +++ A +A I+ Q FR + + V++ Sbjct: 481 NEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDISFQPRDGTRSFRSILWKIVRD 540 Query: 141 A------MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 +R G GI++ GRL GAEIARTE G+ +T R IDY ++ T YG Sbjct: 541 ISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKTSCNTFRHQIDYAYAKVSTRYG 600 Query: 195 VIGVKVWI 202 ++GVKVWI Sbjct: 601 ILGVKVWI 608 >UniRef50_Q7YAL0 Ribosomal protein S3 n=1 Tax=Chara vulgaris RepID=Q7YAL0_CHAVU Length = 270 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 1/119 (0%) Query: 87 LRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG- 145 L+ +++ A I +V A L+A I ++LE++ FR+ + Q + Sbjct: 151 LQSLLSSRAKTHTVIRPLKVASVYQSASLIAQEICNKLEQKTSFRQICRSIFQQIEKCNY 210 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 KGI++ SGR GAEIA+TE + G+ LH IDY ++A T YG++GVKVW+ Sbjct: 211 VKGIRISCSGRNNGAEIAKTECRKYGQTSLHVFSDKIDYAQAQASTPYGILGVKVWVSY 269 Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASV-------S 53 M QKV+P +RL + + +S WF++ + + L D +R+Y Sbjct: 1 MAQKVNPISVRLNVNRSPDSCWFSD-YYYGELLYQDLNIREYFGSIRPPMGAQVFGFRPG 59 Query: 54 RIVIERPAKSIRVTIH 69 R VI K + + Sbjct: 60 RCVIHHFPKRTLIHLF 75 >UniRef50_D2DX51 Ribosomal protein S3 n=19 Tax=Cupressaceae RepID=D2DX51_9CONI Length = 663 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR-VMFRRAMKRAVQN 140 +V K+R +++ I +++ A +A I+ QL FR + + V+ Sbjct: 531 NEVRKMRSLLSGGTNANTFIGSVKIKYVYQSASPIAQDISFQLRDGTRSFRSILWKIVRG 590 Query: 141 A------MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 +R G GI++ GRL GAEIARTE G+ +T R IDY ++ T YG Sbjct: 591 ISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKTSCNTFRHQIDYAYAKVSTRYG 650 Query: 195 VIGVKVWI 202 ++GVKVWI Sbjct: 651 ILGVKVWI 658 >UniRef50_D0FY21 30S ribosomal protein S3, chloroplastic n=1 Tax=Dunaliella salina RepID=D0FY21_DUNSA Length = 706 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 107/208 (51%), Gaps = 33/208 (15%) Query: 15 VKPWNSTWFANTKEFADNL---DSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTA 71 K S F NL + K+++ + L + S+ +E+ + I + Sbjct: 510 TKKHASFLFGTINSEGQNLCPEEQKTKIQERVRLVLDNSH-SKADLEKTLQDIFL----- 563 Query: 72 RPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEV----RKPELDAKLVADSITSQLERR 127 E +EK R + D + +I I + + A +VADS+ LE+R Sbjct: 564 ----------EQIEKQRNMYIDNVQLTPKIAIKFYSVKEKSVKAKASIVADSVVDALEQR 613 Query: 128 VMFRRAMKRAVQNAMR----------LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 FR+ +K+A ++ MR KG+K++VSGRL GAEIAR+EW R GRVPL T Sbjct: 614 SSFRKIIKKAKEDLMRSPISSSDGKINRVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQT 673 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKG 205 LRA++DY+ A+T YG+IGVKVWIFKG Sbjct: 674 LRANLDYSYKTANTIYGIIGVKVWIFKG 701 Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 22/123 (17%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFAN--TKEFADNLDSDFKVRQYLTKELAK--------- 49 MGQKVHP G+R+GI K S WFA ++A ++ D +RQ LT+ + Sbjct: 1 MGQKVHPLGLRVGITKKHQSQWFARFHKNKYAQSVLEDRMLRQTLTQLFPQLLNPVFKKQ 60 Query: 50 --------ASVSRIVIER--PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPA 99 +++I IER I + IH +I E+++ V+ + Sbjct: 61 RDNESSIAPKITQIKIERGLIPYEIGIQIHAENCD-LIKSSIENLKINSDFVSRLQKTRR 119 Query: 100 QIN 102 Sbjct: 120 YFQ 122 >UniRef50_A0RVX9 30S ribosomal protein S3P n=2 Tax=Thaumarchaeota RepID=RS3_CENSY Length = 261 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 86/163 (52%), Gaps = 5/163 (3%) Query: 37 FKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG 96 K+R++L + + + S + +E+ + ++T+H RPGIVIG+KG + +L + + Sbjct: 15 MKLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFD 74 Query: 97 VP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM-RLGAKGIKVEVS 154 + Q+++ E+ PEL ++ + + S +ER FRRA +Q M + A G+++ +S Sbjct: 75 LKSPQVDVKEIETPELYPGVMCNRMASHIERGTAFRRATMWTIQQIMEKKDAMGVQITIS 134 Query: 155 GRLGGAEIARTEWYREGRVPLHTLRADIDY--NTSEAHTTYGV 195 G+L G + + E + G +P AD+ + T G+ Sbjct: 135 GKLRG-DRSAFEKHTSGILPRAGHYADVIVLDDVVHVKTPMGL 176 >UniRef50_Q5PXB8 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda cuneata RepID=Q5PXB8_9CHLO Length = 160 Score = 131 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 84/160 (52%), Gaps = 5/160 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI +P+ S W+A+ K+++ + D +R L K+ +A +I I R Sbjct: 1 MGQKVHPLGFRLGITQPYLSNWYASKKDYSKYVLEDHLIRTLLFKKYNRAKFDKITIFRN 60 Query: 61 A-KSIRVTIHTARPGIVIGKKGED--VEKLRKVVADIAGVPAQINIA-EVRKPELDA-KL 115 + + I+ +P I++G G ++++ + +++ + + +++A Sbjct: 61 IEDHVEIFIYAQKPEILLGTTGARQLQKQIKTSIFQHRKRNSRLKVILSIFCCKINASSA 120 Query: 116 VADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSG 155 +AD I LERR+ ++ + + R G+KV++SG Sbjct: 121 IADFIVEHLERRIPYKVVLTLLKKYLKRNKPLGMKVKISG 160 >UniRef50_Q08365 30S ribosomal protein S3, chloroplastic n=2 Tax=cellular organisms RepID=RR3_CHLRE Length = 712 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 63/131 (48%), Positives = 82/131 (62%), Gaps = 8/131 (6%) Query: 83 DVEKLRKVVADIAGVPAQINIAE--VRKPEL--DAKLVADSITSQLERRVMFRRAMKRAV 138 +E RK+ + +I+I V+ L A VADSI LE+R FR +K+A Sbjct: 578 QIESQRKMYKANLALTPKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAK 637 Query: 139 QNAMR----LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 ++ M KG+K++V+GRL GAEIAR+EW R GRVPL TLRA+IDY A+T YG Sbjct: 638 EDLMLRSRVTRVKGVKIQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYG 697 Query: 195 VIGVKVWIFKG 205 +IGVKVWIFKG Sbjct: 698 IIGVKVWIFKG 708 Score = 67.2 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 25/126 (19%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFA--DNLDSDFKVRQ---YLTKELAKAS---- 51 MGQKVHP G R+GI K S WFA +++A ++ D +R L L K S Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSNLEKESALAT 60 Query: 52 ---------------VSRIVIERPAKSIRVTIHTARPGIV-IGKKGEDVEKLRKVVADIA 95 +++I IER + I + I K ++++ + +V ++ Sbjct: 61 KQSKNRGATQPKAPKITQIKIERGLIPYEIGIQIHSNDCLSITKAIDNIKVSKDLVTNLQ 120 Query: 96 GVPAQI 101 + Sbjct: 121 KTRKYL 126 >UniRef50_D0VMX7 Ribosomal protein S3 n=1 Tax=Volvox carteri f. nagariensis RepID=D0VMX7_VOLCA Length = 742 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 64/128 (50%), Positives = 86/128 (67%), Gaps = 5/128 (3%) Query: 83 DVEKLRKVVADIAGVPAQINIAE--VRKPEL--DAKLVADSITSQLERRVMFRRAMKRAV 138 +E RK+ + +I+I V+ ++ A +VADSI LE+R FR +K+A Sbjct: 610 QIENQRKMYKANLALIPKISIKFFSVKTTDILEKASIVADSIVDALEKRKAFRGVIKKAK 669 Query: 139 QNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 197 ++ MR KG+K++VSGRL GAEIAR+EW R GRVPL TLRA+IDY+ A+T YG+IG Sbjct: 670 EDLMRRRRVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANIDYSYRTANTIYGIIG 729 Query: 198 VKVWIFKG 205 VKVWIFKG Sbjct: 730 VKVWIFKG 737 Score = 67.2 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 25/126 (19%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKE--FADNLDSDFKVRQYLTKELAK--------- 49 MGQKVHP G R+GI K S WFA ++ ++ ++ D +R+ L + Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYGYSQSVFEDHMLRKTLLNLFSNLEKENALAT 60 Query: 50 -------------ASVSRIVIERPAKSIRVTIHTARPGIV-IGKKGEDVEKLRKVVADIA 95 A +++I IER + I + I K ++++ +V+ + Sbjct: 61 KQSKKSGATQAKLAKITQIKIERGLIPYEIGIQIHSDDCLYITKAIDNIKISSGLVSKLQ 120 Query: 96 GVPAQI 101 + Sbjct: 121 KTRKYL 126 >UniRef50_Q6E789 Ribosomal protein S3 n=1 Tax=Saprolegnia ferax RepID=Q6E789_SAPFE Length = 296 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 47/253 (18%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIE-- 58 MGQK+ P +RL K W+S W K +A+ L D ++R+Y+ L +S + I+ Sbjct: 1 MGQKIIPISLRLKNRKNWHSQWIVEKKNYAEILHFDLELRKYIETLLNNKKISTLQIKIN 60 Query: 59 --RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP------------------ 98 I V +H ++ K+ + L + + + Sbjct: 61 KVSKNLYIYVFVHNTFKKEILKKQSNILFHLNSYLNNKYNIKLFFLKAHFKLNNYQKNLR 120 Query: 99 --------------------AQINIAEVRKPELDAKLVADSITSQLERRVMFR---RAMK 135 ++I ++ +++ I ++++ + R + Sbjct: 121 FYIYKYLKKKRRRLKDKKILKFLSICQIAFTLGKMNIISKYIVRTIKKKKIHRGYLNFIN 180 Query: 136 RAVQNA--MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTY 193 R ++ M G K++V GR+ GA+ R Y+EGR+PL +L +I Y E T Sbjct: 181 RILKEYFKMNSKILGYKLQVKGRVNGAKRKRKLVYQEGRIPLSSLDKNIQYTFDEFITKS 240 Query: 194 GVIGVKVWIFKGE 206 GV VK+W + + Sbjct: 241 GVCSVKMWFYLKD 253 >UniRef50_P46307 30S ribosomal protein S3, chloroplastic n=3 Tax=Chlorophyta RepID=RR3_CHLMO Length = 800 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 60/131 (45%), Positives = 86/131 (65%), Gaps = 5/131 (3%) Query: 80 KGEDVEKLRKVVADIAGVPAQINIAEV----RKPELDAKLVADSITSQLERRVMFRRAMK 135 K E++E+ + + + +I+I + L A +V++S+ LE+R FR+ +K Sbjct: 659 KFEELERRKTMWVQNLQLVPKISIKFFSVNQKALNLKASIVSESVVDALEKRKAFRKVIK 718 Query: 136 RAVQNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 +N MR KG+K++V+GRL GAEIARTEW R GRVPL TLRA++DY+ A+T YG Sbjct: 719 TTKENLMRNSEIKGVKIQVAGRLNGAEIARTEWVRAGRVPLQTLRANLDYSYRTANTIYG 778 Query: 195 VIGVKVWIFKG 205 +IGVKVWIFKG Sbjct: 779 IIGVKVWIFKG 789 Score = 76.5 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 32/134 (23%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFA--NTKEFADNLDSDFKVRQYLTK------------- 45 MGQKVHP+G R+GI K S WFA N +++ + D +R L K Sbjct: 1 MGQKVHPSGFRVGITKKHQSQWFARFNKNKYSQTVLEDRMIRDTLNKLFPELLNPSTKGG 60 Query: 46 ---------ELAKASVSRIVIERP--AKSIRVTIHTARPGIVIGK------KGEDVEKLR 88 + K+ +++I IER I + IH ++ K + + KL+ Sbjct: 61 SAPKRHQNARIKKSRITQIKIERNIVPYQIGIQIHAENCKLLKSSIKNLQVKKDILVKLQ 120 Query: 89 KVVADIAGVPAQIN 102 K + + +++ Sbjct: 121 KTRQYLTNLKIKLD 134 >UniRef50_Q95749 Ribosomal protein S3, mitochondrial n=5 Tax=Brassicaceae RepID=RT03_ARATH Length = 556 Score = 129 bits (325), Expect = 7e-29, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 4/189 (2%) Query: 32 NLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVV 91 NL K+ + + K + + I+ I + + +V+K+R + Sbjct: 369 NLVGKDKIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFL 427 Query: 92 ADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-RRVMFRRAMKRAVQNAMRLGAKGIK 150 ++ I +++ A L+A I+ QL+ +R F + V+ + G +GI+ Sbjct: 428 SNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIR 486 Query: 151 VEVSGRL-GGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 + SGRL AE A+T+ Y+ + + IDY E T YG++GVKVWI + G Sbjct: 487 ICFSGRLKDAAEKAQTKCYKHRKTSCNVFNHKIDYAPVEVFTRYGILGVKVWISYSQKKG 546 Query: 210 GMAAVEQPE 218 A E E Sbjct: 547 RRAISETYE 555 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 7/72 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M +K +P +RLG + +S+WF+ + + D +R Y T+ + R Sbjct: 1 MARKGNPISVRLGKNRSSDSSWFSE-YYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 IVIERPAKSIRV 66 +I K + Sbjct: 60 CIILHFPKRTFI 71 >UniRef50_A4WIY8 30S ribosomal protein S3P n=4 Tax=Thermoproteaceae RepID=RS3_PYRAR Length = 220 Score = 129 bits (325), Expect = 7e-29, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 8/201 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+ + + ++++L L+K I + R+ I+ RP +IG+KG V++ Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71 Query: 87 LRKVVADIAGVPA----QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 + ++A GV I+++++ PE+ K+VA I + + + V FRR M A++ Sbjct: 72 VSNILATKLGVENPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLT 131 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKV 200 GAKG ++ VSG+L E AR E G++ A + G+ G++V Sbjct: 132 EAGAKGFEIVVSGKLS-TERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 190 Query: 201 WIFKGEI-LGGMAAVEQPEKP 220 I + ++ P +P Sbjct: 191 RIAPASLQYSDEYKIKPPVRP 211 >UniRef50_Q0P3H9 Mitochondrion, complete genome n=1 Tax=Ostreococcus tauri RepID=Q0P3H9_OSTTA Length = 277 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 108/280 (38%), Gaps = 77/280 (27%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS--VSRIVIE 58 MGQK+ P +RL K + ++W++ K +A+ + +V+ +L + ++ + Sbjct: 1 MGQKISPVALRLQTNKSFQASWYSQ-KLYAEGVHKQLQVQNFLHDVFHQVGTKATKTHVV 59 Query: 59 RPAKSIRVTIHTARPGIV------------------------------------IGKKGE 82 + ++++ P + + KK Sbjct: 60 QTPGALKIHTFFCSPRLFDQKLAKKTMSLKPTHFFQHQRTTQWQFLSNQMHWETLKKKLV 119 Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDA----------------------------- 113 LR + + N+ E + + +A Sbjct: 120 FQSLLRNNLQKSTTLHLT-NLFEQTRHKTNALKFYANHLEAVSQQYFKTATQWEPVKLQE 178 Query: 114 -----KLVADSITSQLERRVMFRRAMKRAVQNAMRL--GAKGIKVEVSGRLGGAEIARTE 166 + VA+ ++ LER+ ++ +VQ ++ +G K+ SGRL G E+A+ E Sbjct: 179 FTKSAQFVAEYVSHALERQKPVKQIF-SSVQTLLKKDPNVEGFKISCSGRLQGVEMAKIE 237 Query: 167 WYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 ++ G++ LH + +DY + A TT+G++GVKVWI + Sbjct: 238 TFKFGKISLHVFTSKVDYAEARALTTFGILGVKVWICYKD 277 >UniRef50_Q9G8W8 Ribosomal protein S3 n=1 Tax=Rhodomonas salina RepID=Q9G8W8_RHDSA Length = 202 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 93/203 (45%), Gaps = 8/203 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT-KELAKASVSRIVIER 59 M ++ + N +RL + K W S WF+ ++ L +D + +Y K S+ ++ I R Sbjct: 1 MTKRSNTNNLRLMLNKDWVSNWFSEKSQYPIFLQNDLIIYKYFFWHYYFKESLLKMRIIR 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 ++ I + + ++ K + L + + + + K ++ +A Sbjct: 61 FSRKIILFFLISYDRKIMLKDFKL--NLNTFLFKAKNIFLVLYKNKFFK--SNSFYIAKK 116 Query: 120 ITSQLERRVMFRR-AMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 I + +E +V FR +K+ + +A K + V GR+ G E+A+ ++ +G +P Sbjct: 117 IATLIENKVRFRSTVVKKLLNDAKL--VKSLLVVCKGRINGVEMAKKDFLVKGSIPFQKF 174 Query: 179 RADIDYNTSEAHTTYGVIGVKVW 201 ++++ A+T G + VKVW Sbjct: 175 HVKLNFSQVIANTLKGSVIVKVW 197 >UniRef50_A9BL58 Rps3 n=1 Tax=Cryptophyta RepID=A9BL58_9CRYP Length = 246 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 94/203 (46%), Gaps = 9/203 (4%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + K+F ++ ++ + L++EL+ + + I + + + + ++G +G Sbjct: 35 SKQKKFINDGVFFSELNELLSRELSDEGYTNVEIRKAPLKTEIILKMTQTHSILGSRGRR 94 Query: 84 VEKLRKVVADIA---GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 ++++ ++ +I + ++ L A A+S+ +L R ++ RRA +++ Sbjct: 95 IKEINGLIKKRFQFDEKSLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRRACYSTLKS 154 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGV 198 M GAKG + VSG+L A+ A+T + +G + + I+ T GVIG+ Sbjct: 155 TMESGAKGCIISVSGKLR-AQRAKTMKFIDGYIIHSGKPVEDYIEKATRHCFLRQGVIGI 213 Query: 199 KVWIFKGEILGGMAAVEQPEKPA 221 K+ I + A V P+KP Sbjct: 214 KISIM---LPWDPAGVRGPKKPL 233 >UniRef50_A6YGC6 30S ribosomal protein S3, chloroplastic n=1 Tax=Leptosira terrestris RepID=A6YGC6_LEPTE Length = 325 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 38/190 (20%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G R+GI K S WF+N+K++ ++ D+ +R + K A +S I I+R Sbjct: 1 MGQKVHPLGFRVGITKKHRSLWFSNSKQYPQSVLEDYVIRNNILKTFPSAEISEIHIQRT 60 Query: 61 -------AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN----------- 102 + + I++ +P ++G K E + KLRK++ + + Sbjct: 61 HHDIESSPNGLIIIIYSKKPNQLVGNKHEKLHKLRKILKQKLTLNRSLIKPKGQVFLNSS 120 Query: 103 --------------------IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 + E+ P A + ++I QL+ R +R +K+ + Sbjct: 121 WRDFSKILLQKQKTDRIKFLVREITTPYSSAFCIGNAIVQQLQDRQRYRFVIKKVIAEVK 180 Query: 143 RLGAKGIKVE 152 + + +K Sbjct: 181 KERKENLKTI 190 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 28/209 (13%) Query: 19 NSTWFANTKEFADNLDSDFK-------VRQYLTKELAKASVSRIVIERPAKSIRVTIHTA 71 NS+W ++F+ L K VR+ T + + ++++ Sbjct: 118 NSSW----RDFSKILLQKQKTDRIKFLVREITTPYSSAFCIGNAIVQQLQDR-------Q 166 Query: 72 RPGIVIGKKGEDVEKLRKVV---ADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV 128 R VI K +V+K RK I E+ E A L + + LE + Sbjct: 167 RYRFVIKKVIAEVKKERKENLKTIQPTNTNKVITSREIPTMEFPAAL--EKAQNPLEYNL 224 Query: 129 MFRRAMKRAVQN--AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNT 186 A ++ Q+ + ++ KG+K++++GRL GAEIARTEW+R+GRVPLHTL+ADIDY+ Sbjct: 225 S---AFNQSKQDKSSYQVPIKGLKIQLAGRLNGAEIARTEWFRKGRVPLHTLKADIDYSY 281 Query: 187 SEAHTTYGVIGVKVWIFKGEILGGMAAVE 215 +A+T YG+IGVKVW+F G G + Sbjct: 282 QKAYTKYGIIGVKVWVFNGIKTGKYQYAK 310 >UniRef50_B9TAP3 60S ribosomal protein L16, putative n=2 Tax=Spermatophyta RepID=B9TAP3_RICCO Length = 668 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 5/170 (2%) Query: 32 NLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVV 91 NL KV + + K + + + I+ I + + R +++K+R ++ Sbjct: 371 NLMGKDKVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLL 429 Query: 92 ADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR-VMFRRAMKRAVQNA---MRLGAK 147 ++ I +++ A +A I+ QL + FR + V++ M+ G + Sbjct: 430 SNRTNTNTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVE 489 Query: 148 GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 197 GI++ SGRL GAEIARTE + G+ + IDY +E T YG+ G Sbjct: 490 GIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 539 >UniRef50_Q8SQM3 40S ribosomal protein S3 n=2 Tax=Apansporoblastina RepID=RS3_ENCCU Length = 228 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 11/200 (5%) Query: 28 EFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL 87 F N + +++++ K L S + + I++ + A+P IG+K + + Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80 Query: 88 RKVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 + + A VP +I + +V + L A + A+ I ++ V +RRA+ A++ A Sbjct: 81 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 140 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDY---NTSEAHTTYGVIGVKVW 201 A+G ++ VSG+L G + A++ +++G V +H+ A DY + T GVIG++V Sbjct: 141 KAQGCQIIVSGKLKG-QRAKSVKFQDG-VLIHSGDAVKDYINTGYATVETKQGVIGIQVR 198 Query: 202 IFKGEILGGMAAVEQPEKPA 221 I + V P P Sbjct: 199 IM---LPYDPEGVLGPNYPL 215 >UniRef50_Q8M1G0 Ribosomal protein S3 n=1 Tax=Chaetosphaeridium globosum RepID=Q8M1G0_CHAGL Length = 324 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 55/117 (47%) Query: 88 RKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK 147 + G I + + A +A I ++E + FR K N+ K Sbjct: 207 NTLNQVSFGATTTIRVIRLASMYQSAASIAADIVQKIESKKSFRSICKFLFSNSFGASIK 266 Query: 148 GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 GI++ SGR GAEIA+TE + G P H IDY ++A T YG++G+KVW+ Sbjct: 267 GIRIACSGRFNGAEIAKTECRKYGASPFHVFSEKIDYAQTKASTPYGIMGIKVWVCY 323 Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 M QKV+P +RL + + +S WF++ + L D +R+Y V+R +I R Sbjct: 1 MAQKVNPISLRLDVNRSSDSLWFSD-YYYTKLLYEDLNLREYFNSIHKM--VTRCIIHR- 56 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN 102 + + IH + + K+ +++ + A ++ Sbjct: 57 SFGLYTCIH-----LFCLPRKRRKHKVSRLLNSVTKEQATVS 93 >UniRef50_Q5PSC9 Ribosomal protein S3 (Fragment) n=20 Tax=Halimeda RepID=Q5PSC9_9CHLO Length = 291 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 1/98 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI +P S W+A+ K ++ + D +R L K+ AKA +I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV 97 ++ + + + +P ++IGKKGE+++ +K + + Sbjct: 61 IENHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98 >UniRef50_B9WLS6 Ribosomal protein, small subunit, putative n=5 Tax=Saccharomycetales RepID=B9WLS6_CANDC Length = 254 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + K+ + ++ ++ T+ELA+ + + + + + V + + V+G++G Sbjct: 7 SKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRR 66 Query: 84 VEKLRKVVADIAGVPAQ---INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 + +L ++ + + I V + L A + A+++ ++L + RRA ++ Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRF 126 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGV 198 AM GAKG++V +SG+L A A+++ Y +G + R ID GV+G+ Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185 Query: 199 KVWIFKG 205 KV I K Sbjct: 186 KVKIMKD 192 >UniRef50_C6FG16 Ribosomal protein S3 n=1 Tax=Isoetes engelmannii RepID=C6FG16_ISOEN Length = 399 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 4/123 (3%) Query: 86 KLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 K+ + + I ++ A L+A I+ +LER+ F+R + Sbjct: 261 KIETLSSSRTNTFTSIEPVKITCVYKSASLIAKEISYELERKKSFQRICGLIFERIENCN 320 Query: 146 ----AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW 201 AKGI++ SGR GAEIA+TE+ + G LH IDY + A T YG +GVKVW Sbjct: 321 CNKYAKGIRIRCSGRFKGAEIAKTEYIKSGETSLHVFSDQIDYAEAGASTPYGTLGVKVW 380 Query: 202 IFK 204 + Sbjct: 381 VSY 383 Score = 51.5 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 7/75 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M QKV+P +RL + +S WF++ F L DF +R Y + + R Sbjct: 1 MAQKVNPISVRLNFNRSSDSGWFSD-YYFGKLLYQDFNLRDYFGSIRPPRRNKFGLRLGR 59 Query: 55 IVIERPAKSIRVTIH 69 +I K + ++ Sbjct: 60 CIIHHFTKRTFIHLY 74 >UniRef50_Q5PX34 Ribosomal protein S3 (Fragment) n=73 Tax=Halimeda RepID=Q5PX34_9CHLO Length = 181 Score = 122 bits (307), Expect = 9e-27, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 26/181 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G R+GI +P S W+A+ + ++ + D +R L K+ +A+ S+I I R Sbjct: 1 MGQKVHPLGFRVGITQPHLSQWYASKRYYSQYVLEDNFIRTILLKKYKRANFSKIHISRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKK-------------GEDVEKLRKVVADIAGVPAQINIAEV 106 + IH GI+IG K + +++ + + Sbjct: 61 TDDHFEIVIHAQNLGILIGTKSEKSEKSEKFKLFQKQIKEFIFHYRQSEWNSKLRVVLHI 120 Query: 107 RKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGA------------KGIKVEVS 154 + + A +AD I LERRV ++ ++ R G+K+++S Sbjct: 121 FRCKTSASSIADFIVEHLERRVPYKVVFNLLKKHLQRQERQERQEHFDSALGIGMKIQIS 180 Query: 155 G 155 G Sbjct: 181 G 181 >UniRef50_Q74MZ4 30S ribosomal protein S3P n=1 Tax=Nanoarchaeum equitans RepID=RS3_NANEQ Length = 230 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 6/183 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 ++F N ++++ L A+VS+++I + RV I++ARP ++ ++ + K Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEERKAHLAK 66 Query: 87 LRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV-MFRRAMKRAVQNAMRLG 145 L ++ I + + P LDA ++A+ + +ER + +RR +R ++ M G Sbjct: 67 LLEL--KFGLEKPVIEVLPIENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIMNAG 124 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVKVWIF 203 A G ++ ++GRL G + +T ++ G + ++D + A+ GV G+ V I Sbjct: 125 AIGAEIVIAGRLSG-QRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVTIL 183 Query: 204 KGE 206 K + Sbjct: 184 KPD 186 >UniRef50_Q22AV9 KH domain containing protein n=3 Tax=Oligohymenophorea RepID=Q22AV9_TETTH Length = 243 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 82/186 (44%), Gaps = 6/186 (3%) Query: 25 NTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDV 84 K+F + + ++ + +K L A + I + R + I +P VIG +G+ Sbjct: 10 KKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGKKH 69 Query: 85 EKLRKVVADIAGV---PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 ++L + + G QI ++ L A +++ +L + V R A +++ Sbjct: 70 KELTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSV 129 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVK 199 ++ GAKG ++ +SG+L + A+T +++G + ID G++GVK Sbjct: 130 IQDGAKGCEIIISGKLK-QQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGVK 188 Query: 200 VWIFKG 205 V I Sbjct: 189 VKIMLP 194 >UniRef50_Q2EEW0 Plastid 30S ribosomal protein S3 n=1 Tax=Helicosporidium sp. ex Simulium jonesi RepID=RR3_HELSJ Length = 241 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 99/236 (41%), Gaps = 36/236 (15%) Query: 7 PNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP------ 60 G+RLG K W + + ++ + + + + I + Sbjct: 7 TIGLRLGYNKTHKLIWSLSKNN-PIFIQTNHFLEYIIKNDPFFCGLILIDFQLMQYIVVH 65 Query: 61 --------------AKSIRVT--------IHTARPGIVIGKK------GEDVEKLRKVVA 92 SI + I + + I ++ + + K++ + Sbjct: 66 KNQLGNFSPLKNNLPNSINLFLKLKIATEIQSNFNSVFILEERLHFLFFKYLNKMKN-LK 124 Query: 93 DIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVE 152 + + ++ I + P L+ + + + L + + RRA+ + N ++ GA+G+K++ Sbjct: 125 MLNNLKIKVKIKFLNNPILEPQWIFYKLHQDLYKGINIRRALAKISSNVIKKGAEGVKIQ 184 Query: 153 VSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 + GR+ G + A +G++PL L ++I+Y + T YG++GVK+W+FKG +L Sbjct: 185 IKGRINGVDKATVIVEEKGKMPLQNLSSEINYYSRALKTVYGLLGVKIWVFKGFLL 240 >UniRef50_D2DX78 Ribosomal protein S3 n=2 Tax=Araucariaceae RepID=D2DX78_ARAHE Length = 731 Score = 119 bits (298), Expect = 9e-26, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 5/126 (3%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV--MFRRAMKRAVQ 139 +V K+R +++D I ++ A L+A + L+ + FR + V+ Sbjct: 603 NEVRKMRSLLSDGTNTNTFIAPVKIESVFQSASLIAQDTSFLLKSNIKRSFRSIFNQIVR 662 Query: 140 NAMRL---GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVI 196 + ++ +GI++ SGRL GA+IARTE + + + IDY ++ T YG++ Sbjct: 663 SIPKVTRERVRGIRIRCSGRLKGAKIARTEHRKYRKPSCNAFGRKIDYAYAKVFTRYGIL 722 Query: 197 GVKVWI 202 GVKVWI Sbjct: 723 GVKVWI 728 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 9/79 (11%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M +K +P +RL + +S WF++ + + D R Y T++ + + Sbjct: 1 MARKANPISVRLHPNRSSDSNWFSD-NYYGKLVYQDVNSRDYFGSIRPPTRKTFGFRLGK 59 Query: 55 IVIERPAKSIRVTIHTARP 73 ++ K IH P Sbjct: 60 CILHHSPKRT--FIHLFFP 76 >UniRef50_Q38EW1 40S ribosomal protein S3, putative n=2 Tax=Trypanosoma brucei RepID=Q38EW1_9TRYP Length = 266 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 13/191 (6%) Query: 41 QYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP-- 98 ++L +ELA + + + I + + V+G+KG + +L + Sbjct: 74 EFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRRIRELTACLQQRFNYKEG 133 Query: 99 -AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRL 157 Q+ V L A A+S+ +L + RRA ++ M GAKG +V + G++ Sbjct: 134 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKI 193 Query: 158 GGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGVKVWIFKG-------EIL 208 G + A++ +R+G + + +D T H G IGV V I + E+L Sbjct: 194 KG-QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRPQSMIEEDEVL 252 Query: 209 GGMAAVEQPEK 219 + V +P+ Sbjct: 253 PDVITVIEPKT 263 >UniRef50_A4KYC4 Ribosomal protein S3 (Fragment) n=3 Tax=Chrysobalanaceae RepID=A4KYC4_9ROSI Length = 389 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-RRVMFRRAMKRAVQN 140 ++++K+R ++++ I +++ A +A I+ QL +R FR + V++ Sbjct: 273 KEMKKMRSLLSNRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKD 332 Query: 141 A---MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 M+ G +GI++ SGRL GAEIARTE + G+ + IDY +E T YG Sbjct: 333 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 389 >UniRef50_A4ZHA7 Ribosomal protein S3 n=8 Tax=Phytophthora RepID=A4ZHA7_9STRA Length = 276 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 99/250 (39%), Gaps = 50/250 (20%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK--ELAKASVSRIVIE 58 MGQK+ P +RL K WNS W N E+++ L D ++++Y + + I Sbjct: 1 MGQKIIPISLRLDKKKNWNSKWIVNNDEYSNLLHFDLEIKKYFENIFNYKNLKLIDLNIV 60 Query: 59 RPAKSIRVTIHTARPGIV----------------------------------------IG 78 + + +I V ++ + + Sbjct: 61 KTSNNINVYVYIQKNSKKYYKLSYNKIINHLNLYFLNHNIKLFIKNVQFFEFIKLRRNLK 120 Query: 79 KKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAV 138 K + ++K ++ ++ + + A K + ++ I LER+ ++ + Sbjct: 121 KIFDKIKKNNRINKNVKKMIYNFSYAFYTK---NINIITFYIKQTLERKKTHKKFINNID 177 Query: 139 QNA-----MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTY 193 M G +++ GRL ++ + +++G++PL+TL DI Y+ +E T Sbjct: 178 NMLQEFFKMFSNFVGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPS 237 Query: 194 GVIGVKVWIF 203 G+ +K+W+F Sbjct: 238 GICSIKLWVF 247 >UniRef50_C1KRI4 Ribosomal protein S3 n=1 Tax=Micromonas sp. RCC299 RepID=C1KRI4_9CHLO Length = 319 Score = 111 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 3/124 (2%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE--RRVMFRRAMKRAVQ 139 + V + V+A +++ A VA I Q E ++ FR + ++ Sbjct: 192 KYVSHIENVLALYTQKKVVWTPYKIKNAFTSASFVAHYIALQFEQNKKKPFRSIFQDVLK 251 Query: 140 NAMRL-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGV 198 ++ GI++ ++GR+GGAE+AR E + G+ LH IDY+ + A+T +G++GV Sbjct: 252 QCVKTPQLVGIRIAIAGRIGGAEMARVEQTQYGQTSLHVFSHTIDYHATSAYTPHGLLGV 311 Query: 199 KVWI 202 KVW+ Sbjct: 312 KVWM 315 Score = 41.8 bits (97), Expect = 0.017, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS 51 M QK+ P +RL K ++++WF++ + + L +++++ Sbjct: 1 MAQKIAPAALRLYTNKKFDASWFSD-RMYGSLLQKTLNIKKFVHSIFESIG 50 >UniRef50_P46740 Ribosomal protein S3, mitochondrial n=1 Tax=Prototheca wickerhamii RepID=RT03_PROWI Length = 500 Score = 111 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 5/142 (3%) Query: 67 TIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLER 126 I +V + + + ++ + +Q+ ++ A +AD I +ER Sbjct: 357 NILGNSKSLVSRNQFKYKNYIENFLSSQYNIDSQLFPFISKQNWQSAGFIADEIVYFIER 416 Query: 127 RVMFRRAMKRAVQNA-MRLGAKGIKVEVSGRLGG----AEIARTEWYREGRVPLHTLRAD 181 RV F R R ++ A M+ +GI++ SGR+GG A+ A E + G LH Sbjct: 417 RVSFSRIKNRILRQASMQSYVRGIRITCSGRVGGKSKKAQRATQECVKYGETSLHVFECK 476 Query: 182 IDYNTSEAHTTYGVIGVKVWIF 203 ID+ + A+T++G++G+KVWI Sbjct: 477 IDFASRIANTSFGLVGIKVWIC 498 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 1 MGQKVHPNGIRL-GIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASV--SRIVI 57 MGQK +P +RL + + ++S W+++ +A D + Y+ + +R+ + Sbjct: 1 MGQKTNPISLRLQNVNRNFDSCWYSD-YFYAKCFSRDLYLNNYINTFFKLYRLPQARVCV 59 Query: 58 ERPAKSIRVT 67 ++I+V Sbjct: 60 NFGIQNIKVY 69 >UniRef50_Q9TCB0 Ribosomal protein S3 n=1 Tax=Nephroselmis olivacea RepID=Q9TCB0_NEPOL Length = 309 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 6/184 (3%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASV--SRIVIERPAKSIRV---TIHTARPGIVIGKK 80 ++ ++ L ++ +L AS+ + K+ R+ + + K Sbjct: 124 SRIYSPQLFFLSALQSFLQHNYKVASLCLESTNQGKQRKNFRISQPFLTNNFTRKWLYPK 183 Query: 81 GEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 ++++ + Q+ + + A IT QLE++ + + ++ Sbjct: 184 DSFLQQVESSINKNVDCSTQVFLMKSSNSLSSANFFVKEITYQLEKKSSINQIWNQVMKK 243 Query: 141 AMRL-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVK 199 ++ +GI++ V+GR+ G E+ARTE + G+ LH+L +DY S A+T +G++GVK Sbjct: 244 VIQTPSIQGIRLSVAGRINGVEMARTEIRKYGQTSLHSLSNKMDYACSHAYTPFGILGVK 303 Query: 200 VWIF 203 +WI Sbjct: 304 IWIC 307 Score = 47.2 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 4/89 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFAN---TKEFADNLDSDFKVRQYLTKELAKASVSRIVI 57 MGQKV+P +RL I + + WF++ TK L + + + + + ++ R + Sbjct: 1 MGQKVNPISLRLPINRSVDCLWFSDIHSTKLMIQYLHFHKYI-ESIFQVTSHLNMGRFFL 59 Query: 58 ERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 + K ++ +I K ++K Sbjct: 60 DVFPKKWTLSCLVHERKNLISKGTRFLKK 88 >UniRef50_C1KR88 Ribosomal protein S3 n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1KR88_9CHLO Length = 310 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 6/141 (4%) Query: 70 TARPGIVIGKKG---EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE- 125 ++R +V G K + V + +++ G + +++ A VA + Q E Sbjct: 168 SSRVFLVKGSKALVSDYVPHVEAILSKTTGTQVVWEVYKMKHVFSSASFVAHYMAIQFET 227 Query: 126 -RRVMFRRAMKRAV-QNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADID 183 R+ FR + V + G++V ++GR+ A A T+ + G+ LH ID Sbjct: 228 QRKKPFRAIFEDVVSKCIKHAHIVGVRVVIAGRIRNAAKASTQMAKYGQTSLHVFSHAID 287 Query: 184 YNTSEAHTTYGVIGVKVWIFK 204 Y ++ AH+ G++G+KVW+ Sbjct: 288 YASTSAHSKNGLLGIKVWLSY 308 >UniRef50_D2EEG8 KH type 2 domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEG8_9EURY Length = 223 Score = 106 bits (264), Expect = 8e-22, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 11/188 (5%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 K+ N +D R+YL K+ ++ +S I IE+ +++ I T +PG +I + + + Sbjct: 3 PKKIVANRVNDETAREYLFKKFSRFGISDIRIEKTPLGMKIVIKTPKPGAIITRANQILR 62 Query: 86 KLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERR--VMFRRAMKRAVQNAM 142 + K + + +I + + P LD +VADSI ++ + + ++ +A+ + M Sbjct: 63 ESSKELGEYFNQESPRIEVEGSQDPNLDPAIVADSIAFKIAKYGPMKYKVVAHKAMDSIM 122 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYR-EGRVPLHTLRADIDYNTSEAH----TTYGVIG 197 GA+G+++E+ G + E A +R G V T + + + A G IG Sbjct: 123 SAGARGVEIEIGGVIK--ERAAHFKFRPTGSVMPKTGQVEF-FGVRSAKKQLVLKRGSIG 179 Query: 198 VKVWIFKG 205 +KV I Sbjct: 180 IKVTIVVP 187 >UniRef50_D2DXE7 Ribosomal protein S3 (Fragment) n=1 Tax=Welwitschia mirabilis RepID=D2DXE7_WELMI Length = 744 Score = 104 bits (259), Expect = 3e-21, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 14/136 (10%) Query: 86 KLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR---VMFR-------RAMK 135 K +++ + I ++ A L+A I++QL R FR R + Sbjct: 601 KRVQMLCNRTNTSYFIGSVKIPYNYQSASLIAQDISNQLRGRNRTRSFRSLVSYLVRFVP 660 Query: 136 RAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRAD--IDYNTSEAHT 191 V + + +GI++ SGRL GAEIA TE G+ P R + ID+ + T Sbjct: 661 VRVNPSASVRVRGIRICCSGRLKGAEIAYTECGEYGKTSAPSSIYRREGVIDHASVHVST 720 Query: 192 TYGVIGVKVWIFKGEI 207 YG+ GVKVWI + Sbjct: 721 RYGIYGVKVWISYSSV 736 >UniRef50_A2DIM3 Ribosomal protein S3, putative n=2 Tax=Trichomonadida RepID=A2DIM3_TRIVA Length = 216 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 6/196 (3%) Query: 38 KVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV 97 ++ + LT+EL K + + + I A + G ++++R ++ + Sbjct: 21 ELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDNHGRRLQEVRMMIQKRWRL 80 Query: 98 P---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 +I I +++ L A +S+ +L R+ RRA ++ M GA+G +V +S Sbjct: 81 KEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAIS 140 Query: 155 GRLGGAEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMA 212 G+L GA A T Y+EG + + + IG++V I + G++ Sbjct: 141 GKLRGA-RASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQATIGIRVLIMLAQDPSGIS 199 Query: 213 AVEQPEKPAAQPKKQQ 228 ++ + + + + Sbjct: 200 GPKESQPDVIKVHEAK 215 >UniRef50_C5KMP5 40S ribosomal protein S3, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5KMP5_9ALVE Length = 244 Score = 93.8 bits (232), Expect = 4e-18, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 11/170 (6%) Query: 67 TIHTARPGIVIGKKGEDVEKLRKVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQ 123 +H V+G+KG + +L +V P ++ V L A+ A+S+ + Sbjct: 39 NLHDYGIRKVLGEKGRRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYK 98 Query: 124 LERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD-- 181 L + RRA ++ M GAKG++V VSG+L A+ A+ + +G + L T Sbjct: 99 LLGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEM 156 Query: 182 -IDYNTSEAHTTYGVIGVKVWIFK---GEILGGMAAVEQPEKPAAQPKKQ 227 +D G++G++V I E G + +PK+ Sbjct: 157 YVDQAIRNVDMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKED 206 >UniRef50_B9GND7 Predicted protein n=2 Tax=rosids RepID=B9GND7_POPTR Length = 74 Score = 92.3 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 36/73 (49%), Positives = 51/73 (69%) Query: 134 MKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTY 193 MK+A++ + +KGI+V+++ L G +IAR EW REGRVPL TLRA I+Y + T Y Sbjct: 1 MKKAIELTEQSNSKGIQVQIAKHLDGKKIARAEWVREGRVPLQTLRAKINYCSYTVRTIY 60 Query: 194 GVIGVKVWIFKGE 206 V+G+K+WIF E Sbjct: 61 RVLGIKIWIFIDE 73 >UniRef50_Q9G4C6 Ribosomal protein S3 n=1 Tax=Thraustochytrium aureum RepID=Q9G4C6_9STRA Length = 251 Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 20/186 (10%) Query: 37 FKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG 96 V YL +L + +++P K ++I G +G ++ ++ V+ + Sbjct: 81 LVVDFYLFVKLLCKYIEFFFLKKPIKIYLISIKPTSNGKFFRSRG--LKDIQDVLQILDN 138 Query: 97 VPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL-----GAKGIKV 151 P K + I +QLE+ ++ + Q KGIK+ Sbjct: 139 FPLH-------------KTLNFFICAQLEKENHHQKIIDTIFQQVKINFQFYTKVKGIKI 185 Query: 152 EVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGM 211 + GR+ G++ ++T G +PL++ A+I +N T +GV GVK++I Sbjct: 186 SIKGRVNGSDRSKTHLLELGSIPLNSFNANIFFNFQHVVTAFGVYGVKIYINYSNNFKNE 245 Query: 212 AAVEQP 217 + ++ Sbjct: 246 TSTKKY 251 >UniRef50_Q9NQS8 Ribosomal protein S3 (Fragment) n=70 Tax=Eukaryota RepID=Q9NQS8_HUMAN Length = 158 Score = 90.4 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 6/123 (4%) Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA 160 + +V L A A+S+ +L + RRA ++ M GAKG +V VSG+L G Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 59 Query: 161 EIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE 218 + A++ + +G + + +D GV+G+KV I + P+ Sbjct: 60 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM---LPWDPTGKIGPK 116 Query: 219 KPA 221 KP Sbjct: 117 KPL 119 >UniRef50_Q9MTE3 Ribosomal protein S3 n=1 Tax=Toxoplasma gondii RepID=Q9MTE3_TOXGO Length = 224 Score = 87.3 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 9/144 (6%) Query: 63 SIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITS 122 +++ I I KK +++ L++ IN ++ P + + Sbjct: 85 KLKIFIKEINNIKRIYKKIDNLNNLKQ------KYYIYINFLILKNPFSSITYLFYYVIK 138 Query: 123 QLERRVMFRRAMKRA---VQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 + ++ + R+ +K+ + N + KGIK+ VSG++ G IA+ E G + Sbjct: 139 KFKQTLSLRKILKQLSLLILNIKKTSIKGIKILVSGKINGVVIAKKETCNYGLNYFNKYV 198 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIF 203 +I YN T +GV+G K WIF Sbjct: 199 YNIKYNVFYLKTKFGVLGFKFWIF 222 >UniRef50_UPI0001855078 30S ribosomal protein S3 n=1 Tax=Helicobacter pylori HPKX_438_CA4C1 RepID=UPI0001855078 Length = 100 Score = 86.1 bits (212), Expect = 8e-16, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 63/93 (67%) Query: 33 LDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA 92 +D D K+R++L KEL A VS IVIER AK +RVT+ ARPG++IGKKG D+EK+++ + Sbjct: 3 IDEDNKIRKFLKKELYYAGVSEIVIERAAKKLRVTVVAARPGLIIGKKGVDIEKVKEGLK 62 Query: 93 DIAGVPAQINIAEVRKPELDAKLVADSITSQLE 125 + INI EV++P+ DA+L S L+ Sbjct: 63 TLIKKEVSINIKEVKRPQADAQLALSFFLSPLK 95 >UniRef50_P48938 Ribosomal protein S3, mitochondrial n=1 Tax=Chondrus crispus RepID=RT03_CHOCR Length = 240 Score = 86.1 bits (212), Expect = 8e-16, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 91/226 (40%), Gaps = 24/226 (10%) Query: 1 MGQKVHPNGIRLGIVKPWNSTW--FANT-KEFADNLDSDFKVRQYLTKELAKAS--VSRI 55 M QK++P RLG + WNST + + K + +++ ++ ++ + + ++ Sbjct: 1 MAQKINPISFRLGTTQVWNSTLQIYGKSFKNYFSIVNNQLNLQNFIIRYVKLNGFQINYY 60 Query: 56 VIERPAKSIRVTIHTARPGIVIGK-KGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAK 114 + ++I+ + P GK + ++L ++++ + K L + Sbjct: 61 EWKMHKNKTFLSIYFS-PSFNNGKLNLTNFKQLSNLLSNWCSNKFIFHFYLNSKWSLTSN 119 Query: 115 LVADSITSQLERRVMFRRAMKRAVQNAM----------------RLGAKGIKVEVSGRLG 158 + +E+++ ++ + G K+ + GR Sbjct: 120 FLTLYTKYLVEQKLGPKKIIVILCNFLQDQLNSSKVMHFKFGFIETKLVGFKIRLVGRFD 179 Query: 159 GA-EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 + ++A++ G + L L + ++Y+ E HT G GV+VW+F Sbjct: 180 SSNQMAKSFDQTIGTLSLTNLSSFVEYSNIEIHTKLGTCGVQVWLF 225 >UniRef50_UPI00016B245A 30S ribosomal protein S3 n=1 Tax=candidate division TM7 single-cell isolate TM7b RepID=UPI00016B245A Length = 118 Score = 84.2 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 17/115 (14%) Query: 91 VADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIK 150 + ++ QINI EVRKPELDA +V +I Q+E +V +RRA+K A+ N MR GA+GIK Sbjct: 1 MKNLFNKEIQINIFEVRKPELDANIVGMNIARQVEGKVAYRRAIKMAIANTMRAGAEGIK 60 Query: 151 VE--------------VSGRLGGAEIAR--TEWY-REGRVPLHTLRADIDYNTSE 188 + V+ I R + W+ RE P TL I N Sbjct: 61 FKEDTPWRNWSNPASRVTFSFTHTHICRFTSNWFVREYSNPDLTLTIHITINCYT 115 >UniRef50_B7XK37 SSU ribosomal protein S3P n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XK37_ENTBH Length = 214 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 81/204 (39%), Gaps = 9/204 (4%) Query: 28 EFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL 87 + ++ + K K + + I ++ I++ I P ++ KK ++L Sbjct: 8 QIIKEGKIKAELDELFGKLFQKETYAGIELKMNQTPIQIFIKVLNPAELLEKKPMIQKQL 67 Query: 88 RKVVADIAGV---PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 + ++A + +I ++ L+ A+ + ++R + +++ + Sbjct: 68 QNMIAQRLNMIPEHIRIVFEKIIDKALEPAYHAELLRQAFINVQPYKRTINSIIRSVRQA 127 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 G +G+ + VSG++ G + A+ + +G + A I + A GVIG+++ I Sbjct: 128 GGQGVCIRVSGKIKG-QRAKATKFIDGLLIQAGQPAKEYIRKAKAIALCKQGVIGIQISI 186 Query: 203 FKGEILGGMAAVEQPEKPAAQPKK 226 + + P + A K Sbjct: 187 M---LPYDSEGIRGPSELIADKIK 207 >UniRef50_O99993 Ribosomal protein S3 n=1 Tax=Porphyra purpurea RepID=O99993_PORPU Length = 227 Score = 82.3 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 85/226 (37%), Gaps = 28/226 (12%) Query: 1 MGQKVHPNGIRLGIVKPWNS------TWFANTKEFADNLDSDFKVRQYLTKELAKASVSR 54 MGQKV+P G R+G+ W+ F N K L + +L + + R Sbjct: 1 MGQKVNPKGFRIGLSNLWHDEGQCYGKSFKNPKN---LLKETRNIFTFLNQYFESKKLVR 57 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAK 114 +E+ + ++ ++ + ++ K + Q+ + Sbjct: 58 GQVEQKVFN-KLKKYSIQYVPILPKSTPSICNTATKTTYAFKKNIQVRNYNATLWYQNGP 116 Query: 115 LVADSITSQLERRVMFRRAMKRA-------------VQNAMRLGAK---GIKVEVSGRLG 158 L+ + I L++ + FR+ + ++ + G+KV +GR G Sbjct: 117 LLCEFIKVSLKKGIAFRKIINTIQQLLVLKTPHKIVLKTSFGTNIMEYTGLKVRYTGRFG 176 Query: 159 G--AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 G + +A + G V L + I + +S HT G+ ++VW+ Sbjct: 177 GSRSRMASSIVCLIGAVSLQKIETHIQFYSSSLHTKQGLCNLQVWM 222 >UniRef50_A8J9X5 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J9X5_CHLRE Length = 1125 Score = 81.1 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 3/121 (2%) Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGG-AEIARTEWYREG 171 A VA+++ S + R + A +A +L ++VEV+GR+G A++A T+ + G Sbjct: 162 ATYVAEALESGSAWGRIERFFLAAAEADAGKL-VAAVRVEVAGRIGRKADMAATKSWAWG 220 Query: 172 RVPLHTLRADIDYNTSEAHTTYGVIGVKVWI-FKGEILGGMAAVEQPEKPAAQPKKQQRK 230 + L +L + +DY T+ A+T GV+G+KVWI ++ + P Sbjct: 221 DLRLASLTSKLDYGTAAANTRMGVLGIKVWIRYQPAAAPDLYFPATGGSGLHAPLPAGAA 280 Query: 231 G 231 Sbjct: 281 P 281 >UniRef50_Q3S286 Ribosomal protein S3 n=1 Tax=Thalassiosira pseudonana RepID=Q3S286_THAPS Length = 308 Score = 80.0 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 16/134 (11%) Query: 85 EKLRKVVADIAGVP----AQINIAEVRKPELDAKLVADSITSQ---------LERRVMFR 131 ++L+K V + +NI + + +L A+ ++D + F Sbjct: 172 KQLKKFVRNSFFKEAINILFVNITKRKSAKLLAEFISDQFKINQLKTDQMAISRKDNYFL 231 Query: 132 RAMKRAVQ---NAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSE 188 +K+ ++ NA G GIK+ + GR A A++ + G+ L + + IDY S Sbjct: 232 GFLKQTIKLLINAEVSGLTGIKIVIKGRFNRAPRAKSVTIQFGKFSLQSFDSKIDYFQST 291 Query: 189 AHTTYGVIGVKVWI 202 A+T G GVKVW+ Sbjct: 292 AYTINGTFGVKVWM 305 >UniRef50_C1QG67 SSU ribosomal protein S3P n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QG67_9SPIR Length = 73 Score = 77.7 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 23/49 (46%), Positives = 33/49 (67%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK 49 MGQKV P G+RLGI K W+S WF +++ +AD+L D +R+Y+ K Sbjct: 1 MGQKVSPIGLRLGINKTWSSKWFEDSRTYADSLHEDLSIRRYIMNYYYK 49 >UniRef50_Q6UVR6 Ribosomal protein S3 n=1 Tax=Pseudendoclonium akinetum RepID=Q6UVR6_PSEAK Length = 525 Score = 75.3 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Query: 146 AKGIKVEVSGRLGGAE-IARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 KG+++ SGRLGG + +A+T GRVPL TLR +D+ T G +GVKVWI Sbjct: 465 IKGLRITFSGRLGGKKGMAKTLTKTTGRVPLSTLREKVDFAKGVVQTKMGSLGVKVWIC 523 >UniRef50_Q7YN77 Ribosomal protein S3 n=1 Tax=Eimeria tenella RepID=Q7YN77_EIMTE Length = 203 Score = 74.2 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 85/205 (41%), Gaps = 7/205 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P R + + W + N+ ++ + + + ++ I + Sbjct: 1 MGQKVNPLIFRSKNFPYYINIWNNFKLTYI-NIKFFLNLQLFTKNK-KQLNILYIQNKYY 58 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEK--LRKVVADIAGVPAQ-INIAEVRKPELDAKLVA 117 + + ++ K + + K ++ + + N ++ P + + Sbjct: 59 YNNYYIYNIILYSKLIYLKNKQYINKYFIKFIQKNYLKKNKFTFNFVVLKHPLISTYFIL 118 Query: 118 DSITSQ-LERRVMFRRAMKRAVQNA-MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPL 175 + ++ L + R+ + + + + KG K +SG++ G+++A+ E ++ L Sbjct: 119 KYLYNKILYTKNSLRKIIPQIILLINKKYKIKGFKCIISGKINGSQMAKIETFKFNESSL 178 Query: 176 HTLRADIDYNTSEAHTTYGVIGVKV 200 ++ YN+ + T YG++G+K+ Sbjct: 179 QNKILNVKYNSIDVITKYGLLGIKI 203 >UniRef50_Q9TAJ2 Ribosomal protein S3 n=1 Tax=Cafeteria roenbergensis RepID=Q9TAJ2_CAFRO Length = 713 Score = 72.3 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 122 SQLERRVMFRRAMKRAVQNAMRL--GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 S+ +R++ F R + R + N KG++++ GR ++ + G +PL Sbjct: 608 SKTKRQIPFIRFLMRLITNLAGSVVRVKGLRIQFKGRFDRWNRTKSLVFTSGNIPLQRKD 667 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMA 212 ADI+Y +S GV G+++W++ G Sbjct: 668 ADIEYGSSHGLVKKGVYGIRLWVWYGRYYHKSY 700 Score = 47.6 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 2 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVS--RIVIER 59 GQKV+P G R+G + W + W+ + + L+ ++ + + L + I Sbjct: 5 GQKVNPVGWRVGFYRKWKTLWYEESWNYGLMLNKTLRINELMQSFLLYKRLPALNCNIMV 64 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA 92 + I + ++ V+K RK + Sbjct: 65 ANQGTEKFIILVYFYNLREEETSQVKKRRKRLR 97 >UniRef50_Q9MG96 Ribosomal protein S3 n=1 Tax=Chrysodidymus synuroideus RepID=Q9MG96_9STRA Length = 265 Score = 71.9 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 11/114 (9%) Query: 89 KVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKG 148 ++ INI + + + +A + ++N G Sbjct: 159 SLIKLNLFTYILINIFKRLHKKKHTRFIAF-----------IKIICSFLIKNKFSNNILG 207 Query: 149 IKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 IK+ ++G+L G + T +G +P TL+ ID+N ++ T YGV G+K+W+ Sbjct: 208 IKIVLNGKLRGKVRSNTIIISKGSIPNQTLKKRIDFNQADIFTKYGVYGIKIWV 261 >UniRef50_Q9AIN3 Ribosomal protein S3 (Fragment) n=2 Tax=Candidatus Carsonella ruddii RepID=Q9AIN3_CARRU Length = 150 Score = 70.7 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 10/157 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG+K++P RLG ++S W+ K F+ L D +R+ + K ++ I I Sbjct: 1 MGKKINPIFFRLGKKTNYHSLWYCKKKNFSFFLKKDILLREIIKKFFFFIDLNNIDII-F 59 Query: 61 AKSIRVTIHTARPGIVIGKKGE---DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVA 117 A I + ++ ++ + + ++ K+ NI + ++ L+ Sbjct: 60 ANKIIINLYLNNFENILSIENYLDLLILEIYKIFKKNILFNLINNIFTINSKKISFYLIN 119 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 ++++ + +K G K+++S Sbjct: 120 YINNKNSIKKIIKKECLK------YSDFLNGCKIQIS 150 >UniRef50_Q9ZZN7 30S ribosomal protein S3 n=1 Tax=Cyanidioschyzon merolae RepID=Q9ZZN7_CYAME Length = 282 Score = 70.7 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query: 147 KGIKVEVSGRLGG--AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 +G+K+ + GRL G +I+ E G VPL T +I Y+T + T YGV G++VWIF Sbjct: 222 RGLKIIIRGRLHGLQNQISTVESIEIGTVPLQTKEHEILYSTRDFVTKYGVYGIQVWIFY 281 Query: 205 G 205 Sbjct: 282 N 282 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 57/155 (36%), Gaps = 8/155 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA--SVSRIVIE 58 M K+ P RLG + W + W+ + +++ L + K+ +YL + L K + + ++ Sbjct: 1 MSHKIRPENYRLGYLFDWKNDWYTHNINYSNFLIKNLKISEYLNRILYKNFLFLGDLTLK 60 Query: 59 RPAKSIRVTI--HTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLV 116 A + +++ + + K + + + + QIN + Sbjct: 61 SNALKVLISLTCYPCKDSY----KNTNWDLINHLCQLYFQKSVQINYYYRHTLLEHPNFI 116 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKV 151 + + LE+ + + + + ++ Sbjct: 117 TNWLCFLLEKEYDLKIILNQVKNFIKKTQENEYQI 151 >UniRef50_Q5EM32 Ribosomal protein S3 n=1 Tax=Mortierella verticillata RepID=Q5EM32_9FUNG Length = 283 Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 84/259 (32%), Gaps = 59/259 (22%) Query: 1 MGQKVHPNGIRLGIVKPW--NSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIE 58 MG K HP +RL W S +F + E + D + A +S+ Sbjct: 1 MGSK-HPLSLRLKTHNKWGETSYYFNSKSELHNYWGVDKIALNVIKHYFQFALISKPKFN 59 Query: 59 RPAKSIRVTIH----------------------------TARPGIVIGKKGEDVEKLRKV 90 + + I ++ + TA ++ + + KL Sbjct: 60 KDSNKIVISFYYFLNLPVSKRFNPYGQSKRIQSSLQGDVTANNKNLLPLEAKGYSKLILK 119 Query: 91 VADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG----- 145 ++ G P ++ + P L++ ++A I + F + M+ + A + Sbjct: 120 LSRFYGKPVELRPVRIHYPYLNSYILAQYIAINIRLG-NFNKLMRTLFKKAKLVRNNNIN 178 Query: 146 -------------------AKGIKVEVSGRL---GGAEIARTEWYREGRVPLHTLRADID 183 G+K+++SGRL A R G + L + + ID Sbjct: 179 TTNFRDLIKYSSLINRPQFLSGLKIQISGRLSQRKAASRTRIVRKSIGTLRLSSSTSLID 238 Query: 184 YNTSEAHTTYGVIGVKVWI 202 + G VKVW+ Sbjct: 239 ASKFSFKGKNGAATVKVWL 257 >UniRef50_Q25809 Rps3 protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q25809_PLAF7 Length = 214 Score = 68.4 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 83/226 (36%), Gaps = 38/226 (16%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWF---ANTKEFADNLDSDFKVRQYLTK-----------E 46 MGQKVHP R I K + + ++ + K + N+ + + + + Sbjct: 1 MGQKVHPLIFRGLIYKNYLNNFYINISKNKYYLINILLTYFIYYNMYRICNYKEDNYINI 60 Query: 47 LAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE----------KLRKVVADIAG 96 S+++ VI + I+ + ++ K++ V Sbjct: 61 NINFSINKFVITFFLYNKYYNIYNLKYIFILLNYFNYYYYNYYNYMCFLKIKYVNNINNI 120 Query: 97 VPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 I + KL+ D + + + ++ F KG+K++ SGR Sbjct: 121 NVIMYYIKKYYIKYKSLKLIFDYLYNNILKKNNF--------------NIKGLKIKFSGR 166 Query: 157 LGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 + + E Y G + L TL +I Y +T YG++ +K+W+ Sbjct: 167 FKNSLKTKIEIYIYGIISLSTLNNNIKYINDIINTKYGILSIKIWL 212 >UniRef50_P46754 Ribosomal protein S3, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RT03_ACACA Length = 298 Score = 66.5 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 18/205 (8%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER---PAKSIRVTIHTARPGIVIGK 79 F N K+ A L + K+ KA +++ RV + +R + Sbjct: 87 FFNLKKNARFLLIKRLFNKKFYKKYRKALRQNKQLKQGLFMLLKKRVILRYSRKLFFLFI 146 Query: 80 KGEDVEKLRKVVADIAGVPAQ----------INIAEVRKPELDAKLVADSITSQLERR-- 127 K + ++ + ++ + I I + K ++A ++++ +L + Sbjct: 147 KNKILKIYWESFKTLSLFYLKRFSRSSFLSKIFIIGLSKMNVNANIISEFFFIRLTQYYT 206 Query: 128 -VMFRRAMKRAVQNAMRLG--AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDY 184 R + ++ M+ KG K+ SGR + W G + T+++ +DY Sbjct: 207 IWEVLRNINFLFKSLMKKRKLVKGYKITCSGRFSRKQRTTYSWKAFGSLAFSTVKSKLDY 266 Query: 185 NTSEAHTTYGVIGVKVWIFKGEILG 209 + Y +KVW+ G+ Sbjct: 267 SYKTIALKYSSCTIKVWVRLGKKKS 291 Score = 57.6 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 59/152 (38%), Gaps = 13/152 (8%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL------AKASVSR 54 MG ++P RL ++ WN+ WF+ + ++ ++ D + ++ K L A + Sbjct: 1 MGHIINPISYRLYNIRYWNNNWFSGSLNYSYLINQDILIDRFFRKFLTTHLDSTNAGIIF 60 Query: 55 I--VIERPAKSIRVTIHTARPG----IVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRK 108 + I R +I + ++ KK ++++ + + + ++ Sbjct: 61 VNLKIIRSFNNISLYVYIHDSFLDLLFFNLKKNARFLLIKRLFNKKFYKKYRKALRQNKQ 120 Query: 109 -PELDAKLVADSITSQLERRVMFRRAMKRAVQ 139 + L+ + + R++ F + ++ Sbjct: 121 LKQGLFMLLKKRVILRYSRKLFFLFIKNKILK 152 >UniRef50_Q6VEE5 Ribosomal protein S3 n=1 Tax=Emiliania huxleyi RepID=Q6VEE5_EMIHU Length = 283 Score = 65.3 bits (158), Expect = 1e-09, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 101/283 (35%), Gaps = 77/283 (27%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL----------------- 43 M QK +P RL + W + ++ ++F + +D ++R ++ Sbjct: 1 MSQKTNPILSRLNNRRSWLTINSSDNRQFNNLFFTDLQIRYFISVVSKFFSILSDKPLIK 60 Query: 44 ----TKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED---------------- 83 +++ + I++ ++++ I + + KK + Sbjct: 61 TYKFNSVFLRSNFTTIMLMGWPRALKKRIFSFNSRVSSYKKVRENHLNFAHFFGLTRFVL 120 Query: 84 ----VEKLRKVVADIAGVPAQINI---AEVRKPELD------AKLVADSITSQLER---- 126 + L+K A + ++ V+ + A+++A+ I Q++ Sbjct: 121 YDSVLRNLQKNRKQNASKKRKTSVLSKKIVKSTDFSLVRSNSAQIIANYIGWQIQASLKQ 180 Query: 127 -----RVMFRRAMKRAVQNAMRLGAK----------------GIKVEVSGRLGGAEIART 165 + F++ + + +Q+ ++ G+KV +GR + R Sbjct: 181 RDWNFQSNFKKGINKTIQSFLKRNVDQTVKSILSMKSKNPICGVKVICAGRWKKTKSGRK 240 Query: 166 EWYR--EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 + + +G++ + + + +D+ +T +G KV + + Sbjct: 241 QKFTLYKGKLAMQSYSSFLDFGFYHGNTKFGSFSFKVLVAYNQ 283 >UniRef50_Q01BA3 Putative ribosomal protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01BA3_OSTTA Length = 145 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Query: 131 RRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRADIDYNTSE 188 R A ++ M GAKG +V VSG+L G + A+ +++G + + +R I T Sbjct: 31 RSACYGVLRYIMESGAKGAEVVVSGKLRG-QRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89 Query: 189 AHTTYGVIGVKVWIFKGEILGGMAAVEQP 217 A G IG++V I G P Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTP 118 >UniRef50_UPI00017EFAFD PREDICTED: hypothetical protein n=1 Tax=Sus scrofa RepID=UPI00017EFAFD Length = 127 Score = 64.6 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGVK 199 M GAKG +V VSG+L G + + + +G + + +D GV+G+K Sbjct: 1 MENGAKGCEVVVSGKLQG-QRTKAMKFVDGLMIHSGDPVNHYVDTALHHVLLREGVLGIK 59 Query: 200 VWIFKGEILGGMAAVEQPEKPAAQ 223 V I + P+KP ++ Sbjct: 60 VKIM---LPWDPMGKMGPKKPLSE 80 >UniRef50_Q5ILK9 Ribosomal protein S3 n=2 Tax=Polysphondylium pallidum RepID=Q5ILK9_POLPA Length = 660 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 68/169 (40%), Gaps = 10/169 (5%) Query: 75 IVIGKKGEDVEKLRKVVADIAGVPAQ---------INIAEVRKPELDAKLVADSITSQLE 125 +V+ +K + K+ V + + + IN + + ++A ++ I ++ Sbjct: 485 LVLKRKFKRANKIFFVYSQLILYNIKQLIKTQQYTINFFGLIEENINADMLLKRILRTMD 544 Query: 126 RRVMFRRAMKRAVQNAMRL-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDY 184 + + ++ + G KV+ +GRL + +AR + ++G + + + IDY Sbjct: 545 ITKSLKWLILNMLRKLEKSMSFFGFKVKFAGRLSASIMARVDIIQKGLISTNNMNVYIDY 604 Query: 185 NTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 YG G+KVW+ + ++ K + + + ++ Sbjct: 605 AKDSIVLKYGKCGIKVWLVRNLLVYMPYKYVYSYKFNNNKNEWKYQKKQ 653 >UniRef50_Q9G916 Ribosomal protein S3 n=1 Tax=Ochromonas danica RepID=Q9G916_OCHDN Length = 250 Score = 59.9 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 40/77 (51%) Query: 128 VMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTS 187 + F + + + KG+K+ ++GRL G A+T + G++PL + + I + + Sbjct: 173 LAFLKKLFSYLIFRKHSQIKGVKLIIAGRLKGKTRAKTSKFILGKIPLSSEKEKIKASQT 232 Query: 188 EAHTTYGVIGVKVWIFK 204 +T YG G+K+W+ Sbjct: 233 HIYTVYGCFGLKLWVNY 249 >UniRef50_UPI000155D30A PREDICTED: hypothetical protein, partial n=2 Tax=Euteleostomi RepID=UPI000155D30A Length = 85 Score = 58.8 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 35/75 (46%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + ++F + ++ ++LT+ELA+ S + + + I R V+G+KG Sbjct: 6 SKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRR 65 Query: 84 VEKLRKVVADIAGVP 98 + +L VV G P Sbjct: 66 IRELTAVVQKRFGFP 80 >UniRef50_Q9G8Q4 Ribosomal protein S3 n=1 Tax=Naegleria gruberi RepID=Q9G8Q4_NAEGR Length = 523 Score = 58.4 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 17/103 (16%) Query: 118 DSITSQLERRVMFRRA--MKRAVQN-------AMRLGAKGIKVEVSGRLGGAEIARTEWY 168 + I S+ ++ F + +K+ + + GI++E +G AR Y Sbjct: 405 NYILSRFNKKSFFSKFLEIKKLFEELYYNEVLIKKYPLIGIRIECNGPPKRGRQARLVAY 464 Query: 169 RE--------GRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 + G++P ++ ADIDY S A T G IG+KVWIF Sbjct: 465 HQIVKNYKLFGKMPNKSVLADIDYYQSFARTKQGSIGIKVWIF 507 >UniRef50_UPI00005A35DE PREDICTED: similar to 40S ribosomal protein S3 n=1 Tax=Canis lupus familiaris RepID=UPI00005A35DE Length = 161 Score = 57.2 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 50/182 (27%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + ++F + ++ ++LT+ELA+ SR+ + + I T R V+G+K Sbjct: 6 SKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK--- 62 Query: 84 VEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVM-FRRAMKRAVQNAM 142 ++ FRR Sbjct: 63 -------------------------------------AGGCGNGLLWFRRGG----LAVQ 81 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT---LRADIDYNTSEAHTTYGVIGVK 199 GAKG + VSG+L G + A++ + + + +H+ + +D + GV+G K Sbjct: 82 ESGAKGYEAMVSGKLQG-QRAKSAKFVDDSM-IHSRDCVNHYVDTSVHHVLLRQGVLGSK 139 Query: 200 VW 201 Sbjct: 140 CR 141 >UniRef50_Q23891 ORF1740 n=1 Tax=Dictyostelium discoideum RepID=Q23891_DICDI Length = 1740 Score = 57.2 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 80/205 (39%), Gaps = 27/205 (13%) Query: 24 ANTKEFADNLDSDFKVRQYLT--KELAKASV-SRIVIERP---AKSIRVTIHTARPGIVI 77 + +K++ + ++ + + L KA++ ++ +R + I++ ++ ++I Sbjct: 1525 SKSKKYIGVVKKTILIKVLIKVLRSLLKANILTKKEAKRRRKIKELIKIFLYP----LLI 1580 Query: 78 GKKGEDVEKLRK---------------VVADIAGVPAQINIAEVRKPELDAKLVADSITS 122 K+ +LRK + + V IN + + A+ V + Sbjct: 1581 TKRQIQKVRLRKKNKIYLLMAQIFLYNIKQLVVSVNYSINFFGIIGSSITAEYVVRRLKE 1640 Query: 123 QLERRVMFRRAM--KRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 +LE A+ K + G KV+ SGRL G +A+ + G + + Sbjct: 1641 RLELTKRNGSALLLKVMAKLMRSQHVVGCKVKYSGRLTGNSMAQQKVESRGLIGNSNMNV 1700 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKG 205 IDY +G G+K+WI + Sbjct: 1701 YIDYAQDNLVRKHGKCGLKLWIVRN 1725 >UniRef50_D1HDP1 Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=2 Tax=rosids RepID=D1HDP1_VITVI Length = 576 Score = 56.5 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 + ++FA + + + LT+EL + S + + I + V+G+KG+ Sbjct: 1 MSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGEKGK 60 Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 +++L ++ +A + AQ AK + + + + AV++ + Sbjct: 61 KIKELTSLLGGLAMLCAQR-----------AKSMKFKDGYLISSGQPVKDYIDLAVRHVL 109 Query: 143 RLGAKGIKVEV 153 R G GIKV++ Sbjct: 110 RQGVLGIKVKI 120 Score = 43.4 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 160 AEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQP 217 A+ A++ +++G + ++ ID GV+G+KV I G ++ P Sbjct: 77 AQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQGVLGIKVKIMFNWDPKGKQSLTTP 135 >UniRef50_C0KT85 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda RepID=C0KT85_9CHLO Length = 176 Score = 55.7 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 23/142 (16%) Query: 55 IVIERPAKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN----------- 102 I I R ++ I + I +P I IGKKGE+++ +K + + +N Sbjct: 1 IKISRKIENHIEIVIRAQKPEIFIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKL 60 Query: 103 --IAEVRKPELDAKLVADSITSQLERRVMFRRAM-------KRAVQ--NAMRLGAKGIKV 151 I V + + A +AD + LE+R+ ++ K+ Q A+R A + Sbjct: 61 RVILHVIRCQNGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSI 120 Query: 152 EVSGRLGGAEIARTEWYREGRV 173 E S LG A+ + E R G V Sbjct: 121 ESSPGLGAADGSVFEQDRAGSV 142 >UniRef50_Q2TUF7 Ribosomal protein S3 n=18 Tax=Phaeophyceae RepID=Q2TUF7_9PHAE Length = 286 Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 9/110 (8%) Query: 106 VRKPELDAKLVADSITSQLERRVM------FRRAMKRAVQNAMR-LGAKGIKVEVSGRLG 158 V K + A ++ I + R F +K+A + +G+K+++ GR Sbjct: 166 VIKNKASATSLSRFIIQNISSRQRRKRHYEFLGYLKQAFTALQKYKKIQGVKIQIKGRFT 225 Query: 159 GAEIARTEWYRE--GRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 R++ ++ G++PL + I + T YG +G+KVWI E Sbjct: 226 HKAKGRSKVWKYQMGQMPLSQISMPIQAEYMQTQTGYGSVGLKVWICNWE 275 >UniRef50_UPI0001859BF7 MRP3 n=1 Tax=Cryptococcus neoformans var. grubii RepID=UPI0001859BF7 Length = 235 Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 59/134 (44%), Gaps = 16/134 (11%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAV--- 138 + L +V++++ G ++ + ++ P L++ ++A I L+ F R + + Sbjct: 87 NTINALGEVLSNVWGQAVELRLVKLHYPYLNSDILAAFIMKNLDTD-RFERVINKIFGIT 145 Query: 139 ------QNAMRLGAKGIKVEVSGRLGGAEIAR----TEWYREGRVPLHTLRADIDYNTSE 188 ++ + GIK+ ++GRL E +R + + G T R I++ Sbjct: 146 TPVVSGESNLPSHIIGIKIRLAGRLV-TEPSRPRMTVQSAQIGSFKNST-RTIIEFGQCS 203 Query: 189 AHTTYGVIGVKVWI 202 + G + V+VWI Sbjct: 204 SVNKKGALTVQVWI 217 >UniRef50_Q3T4C4 Ribosomal protein S3 n=1 Tax=Smittium culisetae RepID=Q3T4C4_SMICU Length = 231 Score = 53.0 bits (126), Expect = 7e-06, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 68/182 (37%), Gaps = 31/182 (17%) Query: 47 LAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEV 106 + KA +S + I++ I+ ++ K D+ K+ + +I + INI ++ Sbjct: 42 IEKAIISEPIFIYKLNEIKIIIYYWSSFNLLLDK--DINKILLYINNILNIKVNINIIKL 99 Query: 107 RKPELDAKLVADSITS-------------------------QLERRVMFRRAMKRAVQNA 141 +KP L +K++++ I+ + + Sbjct: 100 KKPYLSSKILSEYISINIKKYNIKKIAKKIIKQIKIEKKLLNPLINFNYNNIKYYYINKK 159 Query: 142 MRLGAKGIKVEVSGRLGG---AEIARTEWYREGRVPLHTLRADIDY-NTSEAHTTYGVIG 197 + GIK+ GRL AE + + +G + ++L IDY + G IG Sbjct: 160 LYSSISGIKLVFKGRLSKRRTAERKKILTFNKGFLNKNSLFTLIDYKSPYNFKFINGSIG 219 Query: 198 VK 199 +K Sbjct: 220 IK 221 >UniRef50_Q8LNX7 Putative ribosomal protein S3 (Fragment) n=1 Tax=Zinnia violacea RepID=Q8LNX7_ZINEL Length = 143 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 5/64 (7%) Query: 160 AEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQP 217 A+ A++ +++G + ++ ID GV+G+KV I P Sbjct: 1 AQRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLD---WDPTGKLGP 57 Query: 218 EKPA 221 + P Sbjct: 58 KTPL 61 >UniRef50_B2VQ35 Ribosomal protein S3 n=3 Tax=Dictyostelium citrinum RepID=B2VQ35_DICCI Length = 1775 Score = 51.5 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 31/227 (13%) Query: 6 HPNGIRLGIVKPWNSTWF----ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPA 61 + +RL I+ + + +K++ + ++ + K L ++I ++ A Sbjct: 1536 NQLAVRLKILGKHLKRFTKGITSQSKKYIGAVKKTILIKVLI-KVLRSLLQTQIRTKKDA 1594 Query: 62 KS---IRVTIHTARPGIVIGKKGEDVEKLRK---------------VVADIAGVPAQINI 103 K I+ I ++I K+ +LRK V + V IN Sbjct: 1595 KRRRKIKEIIKIFLYPLLINKRQIQKVRLRKKNKIYLLMAQIFLYNVKQLVTSVNYSINF 1654 Query: 104 AEVRKPELDAKLVADSITSQL-----ERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLG 158 + + A+ V + +L K+ +++ G K++ SGR+ Sbjct: 1655 FGITGSSITAEYVLRRLRERLMTCHKHGGWFLTSIQKKLMRS---KHVVGFKLKFSGRIT 1711 Query: 159 GAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 G +A+ ++G + + ID+ +G G+K+WI + Sbjct: 1712 GNSMAQKNIIKKGIIGNSNMNVYIDFAQDNIVRKHGKCGLKLWIVRN 1758 >UniRef50_B9SHX4 Chloroplast 30S ribosomal protein S7, putative n=1 Tax=Ricinus communis RepID=B9SHX4_RICCO Length = 89 Score = 51.5 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 134 MKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 M++A++ KGI+V+++GRL G EIAR EW R+GR + Sbjct: 1 MRKAIELTEHADTKGIQVQIAGRLDGKEIARVEWIRKGRTKNN 43 >UniRef50_D1HRG5 Whole genome shotgun sequence of line PN40024, scaffold_49.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HRG5_VITVI Length = 458 Score = 51.1 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 52/148 (35%) Query: 64 IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQ 123 + IH + V+ KKG+ + +L VV Sbjct: 110 TEIIIHATQTQNVLCKKGKKIRELTSVVQKRF---------------------------- 141 Query: 124 LERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRAD 181 M G KG +V +SG+L + A++ +++G + ++ Sbjct: 142 -----------------VMESGTKGCEVIMSGKLC-VQCAKSIKFKDGYLIFSGQLVKDY 183 Query: 182 IDYNTSEAHTTYGVIGVKVW----IFKG 205 ID G++ +K IF+G Sbjct: 184 IDSTVRHVLLKQGILSIKFVFYLCIFRG 211 Score = 48.0 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 3/77 (3%) Query: 65 RVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV---PAQINIAEVRKPELDAKLVADSIT 121 + IH + V+GKKG + +L VV ++ + A A+S+ Sbjct: 330 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAESLR 389 Query: 122 SQLERRVMFRRAMKRAV 138 +L ++ RRA + Sbjct: 390 FKLLGGLVVRRAGYGVL 406 >UniRef50_Q2TUB8 Ribosomal protein S3 n=1 Tax=Dictyota dichotoma RepID=Q2TUB8_DICDH Length = 277 Score = 50.7 bits (120), Expect = 3e-05, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%) Query: 114 KLVADSITSQLERRVM--FRRAMKRAVQ-NAMRLGAKGIKVEVSGRLGGAEIARTEWYRE 170 + +I ++ +R+ F R +K+ ++ + KGIK+++ GR G R++ ++ Sbjct: 181 NFIRQNIRTRSKRKKHTDFTRFLKQGIEIFDSKKKIKGIKIQLKGRFGYKPKGRSKIWKY 240 Query: 171 --GRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 G +PL +RA I Y + +A T G +G+K WI+ Sbjct: 241 QLGSLPLSQIRAVIQYRSQQAQTKLGSVGIKTWIYYN 277 >UniRef50_Q33766 Ribosomal protein S3 n=2 Tax=Blastocladiaceae RepID=Q33766_ALLMA Length = 241 Score = 50.3 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 30/195 (15%) Query: 51 SVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKV-----------VADIAGVPA 99 +S+I + I I G + +R+ + + Sbjct: 48 GISKIEYHSLSNGKLKVI-VTGMKIFDGTLLRSLFNMRQQHLGNSLNPFLSLFNTHWTQI 106 Query: 100 QINIAEVRKPELDAKLVADSITSQLERRVMFRRA------------------MKRAVQNA 141 ++ + LD +L+A SI + + +F MK Sbjct: 107 ELLRQSLPYNYLDPELLARSIAGRKVSKGVFGDIPFWSPDGGNIKNATMFGPMKNPEILD 166 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW 201 R GI++E+ G G +++ G + ++ + ID+ + + T G+IGVKVW Sbjct: 167 SRHVITGIRIEIKGITGKMTMSKKVIKTFGTLRFNSSDSIIDFGEASSMTARGIIGVKVW 226 Query: 202 IFKGEILGGMAAVEQ 216 I + A + + Sbjct: 227 IAYKTVEQNPAGLVK 241 >UniRef50_B2XX96 Ribosomal protein S3 n=1 Tax=Dictyostelium fasciculatum RepID=B2XX96_9MYCE Length = 983 Score = 48.4 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Query: 111 LDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK------GIKVEVSGRLGGAEIAR 164 + + A+++ +L +R+ RR + MR + G KV+ +GRL + +A Sbjct: 866 ISENITAETLLRRLVQRMDIRRRKYIKIAIGMRRKLERSKNFLGFKVKFAGRLSPSIMAS 925 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 ++G + L +DY YG G+KVW+ + Sbjct: 926 QTIIQKGIIGTGRLNVYLDYAQGSVMFKYGKCGIKVWLARN 966 >UniRef50_Q0H8Z0 Ribosomal protein S3, mitochondrial n=1 Tax=Ustilago maydis RepID=RT03_USTMA Length = 266 Score = 48.4 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 17/135 (12%) Query: 87 LRKVVADIAGVPAQINIAEVRKPELDAKLVADSITS--QLERRVMFRRAM---KRAVQNA 141 L +A + + + P L++ +++ + + F+ A+ + Sbjct: 130 LSTTLAQLYQKEVHVIATRLYYPYLNSDILSQYLAHNGPSNTFMDFQEAILTNPSLHKTN 189 Query: 142 MRLGAKGIKVEVSGRL---GGAEIARTEWYREGR---------VPLHTLRADIDYNTSEA 189 + GIKV+VSGRL + Y G L IDY+ Sbjct: 190 LPAHISGIKVQVSGRLVTETVIPRITVKSYLIGSFQRNSNNTANKLGDFVTSIDYSKFTT 249 Query: 190 HTTYGVIGVKVWIFK 204 G VKVWI + Sbjct: 250 KNELGAFTVKVWICQ 264 >UniRef50_Q4MYB8 Ribosomal protein S3, putative n=1 Tax=Theileria parva RepID=Q4MYB8_THEPA Length = 232 Score = 48.0 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 62/155 (40%), Gaps = 14/155 (9%) Query: 64 IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP-------AQINIAEVRKPELDAKLV 116 I + + + + +++ KL + I++ +++ + + V Sbjct: 78 ISLIFYNLKKNKALLFLYKNIIKLSNYINYFIKFNLYASNYFVFIHMKKLKYYKNNIYYV 137 Query: 117 ADSITSQLERRVMFR-------RAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYR 169 SI + +E+ F+ ++ ++ + ++ G K SG L ++ Y Sbjct: 138 ITSIKNFIEKNKNFKVRIIYFINSLFKSDKYNRKINIIGAKCLYSGCLYKNSKKKSFKYA 197 Query: 170 EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 G L + +++ Y T G++G+KVW+++ Sbjct: 198 RGNTSLSFVMSNVVYAKKSVKTDNGMVGIKVWLYR 232 >UniRef50_Q3LWD3 Ribosomal protein S3 n=1 Tax=Bigelowiella natans RepID=Q3LWD3_BIGNA Length = 262 Score = 47.6 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 53/142 (37%), Gaps = 5/142 (3%) Query: 68 IHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-R 126 +H + + K + + + I +I + + + + Sbjct: 95 LHCSFTKKL-KNKLTLTKNIISHLFFINSNKLKILYKNYKSSNISTMTQSSRMKEAFNYT 153 Query: 127 RVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDY 184 FR + ++ + G +G +++ G + ++ +T +R G + ++ + ID Sbjct: 154 NKSFRSIIFNTLRFLINSGVRGCMIKLKG-VYRSKRTKTFKFRRGLISHSGIQNNDWIDS 212 Query: 185 NTSEAHTTYGVIGVKVWIFKGE 206 ++ + G +G+ + I K E Sbjct: 213 DSFYLNKKRGTLGINIKIMKKE 234 >UniRef50_A4XIG3 PpiC-type peptidyl-prolyl cis-trans isomerase n=2 Tax=Clostridia RepID=A4XIG3_CALS8 Length = 340 Score = 46.8 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 4/127 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVT--IHTARPGIVIGKKGEDV 84 +++ + L D ++R Y + L K R + R+ ++ + E + Sbjct: 119 RKYIEELKRDMEMRNYFNQYLRKIGSDENHFYRDLQKTRIINKLYKYVTERITLSDSEVI 178 Query: 85 EKLRKVVADIAGVPAQINIAEVRKPELDAK--LVADSITSQLERRVMFRRAMKRAVQNAM 142 + + + V E DAK VA+ I S+L+R F + +K+ + Sbjct: 179 KYYNANKSQFRKIKVMDIFLRVENAEEDAKKRKVANEIISELKRGEDFEKLVKKYSEVES 238 Query: 143 RLGAKGI 149 G KGI Sbjct: 239 LDGKKGI 245 >UniRef50_B5A4G6 40S ribosomal protein S3 n=1 Tax=Gymnochlora stellata RepID=B5A4G6_GYMST Length = 255 Score = 46.8 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 4/130 (3%) Query: 77 IGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-RRVMFRRAMK 135 I K ++ L + ++N+ +K + + + + L+ FR+ + Sbjct: 98 IASKKHIIKILLSRLLSERFTALRLNLRLYKKDKFSSHIQGLRLKKLLKYDYKRFRKEIS 157 Query: 136 RAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADI--DYNTSEAHTTY 193 +++ MR GA+G +++ G ++ RT + G V D Sbjct: 158 NSLKYIMRNGARGCLIQIKGA-HKSKRTRTVRFTRGFVSYAGGANARWTDGYHFNLKKKR 216 Query: 194 GVIGVKVWIF 203 GVIG+K+ I Sbjct: 217 GVIGIKIKIL 226 >UniRef50_A7AXG9 Rps3 n=1 Tax=Babesia bovis RepID=A7AXG9_BABBO Length = 237 Score = 46.4 bits (109), Expect = 7e-04, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 79/238 (33%), Gaps = 37/238 (15%) Query: 1 MGQKVHPNGIR------LGIVKPWNSTWFANTK--EFADNLDSDFKVRQYLTKELAKASV 52 M + + P R I K + + K L K + Sbjct: 1 MTKSISPIIFRQNLFLNSTINKIHI-KLYKTLNYLNYFKFFQLILNTIYMYKKTLKKIRI 59 Query: 53 SRIVIERPAKSIRVT---IHTARPGIVIGKKGED--------VEKLRKVVA-------DI 94 +R + + ++ G+ GKK + + K + ++ Sbjct: 60 NRKFLYFTCSYTDINNICLNICFYGLF-GKKHKSSIIPSYMALYKFTSYLNYFLHHNLNV 118 Query: 95 AGVPAQINIAE--VRKPELDAKLVADSITS-QLERRVMFRRAM---KRAVQNAMRLGAK- 147 I + V + + +S+ L+ + + + + + + Sbjct: 119 YNRNLFIWVLIPCVVNTGRNKFYIMNSLKYCILKNTNHYSKIISLCNKILTYKFKNRISI 178 Query: 148 -GIKVEVSG-RLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 GIKV+ SG G E RT Y +G V + +++ +I+Y S +T G IG+K W+ Sbjct: 179 HGIKVKYSGCTHKGGEKKRTFAYSKGDVSICSVKENIEYINSSINTYKGTIGIKCWLV 236 >UniRef50_Q9MF63 Orf246 protein n=1 Tax=Beta vulgaris subsp. vulgaris RepID=Q9MF63_BETVU Length = 246 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL 43 M +K +P +RL + + +S+WF N + + D +R Y+ Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDLNLRSYV 42 >UniRef50_B0X7L7 40S ribosomal protein S3 n=1 Tax=Culex quinquefasciatus RepID=B0X7L7_CULQU Length = 179 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 9/87 (10%) Query: 133 AMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTT 192 + ++ M AKG +V VSG+L G + A++ + +G + D Sbjct: 75 VIYGVLRFIMESCAKGYEVVVSGKLRG-QRAKSMTFVDGMMIHSD-----DPCKEATPLR 128 Query: 193 YGVIGVKVWIFKGEILGGMAAVEQPEK 219 G +G++V I + P++ Sbjct: 129 QGELGIQVKIV---LPWDPNGNIGPKE 152 >UniRef50_Q0QIP7 Ribosomal protein S3 n=1 Tax=Oltmannsiellopsis viridis RepID=Q0QIP7_OLTVI Length = 229 Score = 42.6 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Query: 1 MGQKVHPNGIRLGI-VKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA 50 MG K+ P RL + ++ S+W ++ ++A+ ++ D K+R Y+ K ++ Sbjct: 1 MGHKITPISNRLSVGIRNPKSSW-VSSYDYAELINKDLKLRNYIKKLISNI 50 >UniRef50_C5LNU7 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LNU7_9ALVE Length = 106 Score = 42.6 bits (99), Expect = 0.011, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKG 81 + ++F + ++ + LT LA+ S + + + I R V+G+KG Sbjct: 11 SKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68 >UniRef50_B2XX95 Mp26-like protein n=1 Tax=Dictyostelium fasciculatum RepID=B2XX95_9MYCE Length = 843 Score = 41.4 bits (96), Expect = 0.022, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANT-KEFADNLDSDFKVRQYLTKELAKASVSRI 55 MG V+P +R+G+V PW S ++ + + DF + Y+ ++ Sbjct: 1 MGHVVNPILLRIGVVNPWISASYSRKNNKRVKYIIEDFLIYNYIRNFFFNKVYLKV 56 >UniRef50_Q8HIT3 Orf269 n=1 Tax=Monosiga brevicollis RepID=Q8HIT3_MONBE Length = 269 Score = 41.1 bits (95), Expect = 0.028, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 8/69 (11%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFAN--TKEF----ADNLDSDFKVRQYLTKELAKASV-- 52 M +K++PN RLG W S + N K + + L +D +R+Y+ ++ Sbjct: 1 MAKKINPNRFRLGSKFLWWSISYLNLQNKGYRKIGRELLHNDLLIRKYIENVNKSFNILT 60 Query: 53 SRIVIERPA 61 S IVI R Sbjct: 61 SDIVISRKP 69 >UniRef50_B7CCI6 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7CCI6_9FIRM Length = 208 Score = 40.7 bits (94), Expect = 0.041, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 29 FADNLDSDFKVRQYLTKELAKASVSR-IVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL 87 + D ++ Y+ A + + IE R+T++T I+IGK G+ ++ Sbjct: 52 YCQKDIED-FIKSYIQTYFDNAELDGTVEIENDHGFYRITVNTKNNAIMIGKAGKSLQAF 110 Query: 88 RKVVA 92 ++V Sbjct: 111 NRLVK 115 >UniRef50_UPI00006CD8A3 hypothetical protein TTHERM_00522130 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD8A3 Length = 3452 Score = 40.7 bits (94), Expect = 0.045, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%) Query: 3 QKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVR-QYLTKELAKASVSRIVIERPA 61 Q ++ + +R + + S + F + + YL K++ + +S IVIE Sbjct: 3033 QSINSSQLRFYMNQAHVSKYSTQKINFVKYFQKNLTEQTSYLEKKVWEHLISAIVIEENQ 3092 Query: 62 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT 121 + ++ + ++ E + + + + + + I E + ++ DS T Sbjct: 3093 QH-KLVLKINTFNGILR---ETLSSIVINMNERDNILYEFYIEEYIFSKSTPLMLNDSFT 3148 Query: 122 SQLERRVMF 130 L R+ F Sbjct: 3149 QNLYIRLHF 3157 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q12GW5 30S ribosomal protein S3 n=397 Tax=Bacteria RepI... 272 8e-72 UniRef50_B5YDU9 30S ribosomal protein S3 n=194 Tax=Bacteria RepI... 271 1e-71 UniRef50_Q0RRR5 30S ribosomal protein S3 n=406 Tax=cellular orga... 269 6e-71 UniRef50_B2T745 30S ribosomal protein S3 n=167 Tax=cellular orga... 262 5e-69 UniRef50_Q01W98 30S ribosomal protein S3 n=172 Tax=Bacteria RepI... 262 6e-69 UniRef50_C9KPB3 Ribosomal protein S3 n=1 Tax=Mitsuokella multaci... 256 3e-67 UniRef50_C6XHI5 30S ribosomal protein S3 n=1 Tax=Candidatus Libe... 254 2e-66 UniRef50_C7M2X8 Ribosomal protein S3 n=2 Tax=Bacteria RepID=C7M2... 251 1e-65 UniRef50_B2S2E2 30S ribosomal protein S3 n=2 Tax=Treponema palli... 250 3e-65 UniRef50_Q1IX78 30S ribosomal protein S3 n=2 Tax=Deinococcus Rep... 249 6e-65 UniRef50_UPI0001C30EBD ribosomal protein S3 n=1 Tax=Conexibacter... 248 1e-64 UniRef50_C1KRC6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 247 2e-64 UniRef50_C1CXG0 30S ribosomal protein S3 n=61 Tax=Bacteria RepID... 246 4e-64 UniRef50_Q3KLH5 30S ribosomal protein S3 n=13 Tax=Chlamydiaceae ... 244 2e-63 UniRef50_A8PNP8 Ribosomal protein S3 n=2 Tax=Gammaproteobacteria... 244 3e-63 UniRef50_B4CUY0 Ribosomal protein S3 n=1 Tax=Chthoniobacter flav... 241 1e-62 UniRef50_A6LEI5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=... 241 1e-62 UniRef50_D2QSG4 Ribosomal protein S3 n=15 Tax=Bacteria RepID=D2Q... 241 1e-62 UniRef50_A9NED9 30S ribosomal protein S3 n=175 Tax=Bacteria RepI... 239 8e-62 UniRef50_Q7UN14 30S ribosomal protein S3 n=5 Tax=Planctomycetace... 238 9e-62 UniRef50_Q3APH9 30S ribosomal protein S3 n=8 Tax=Chlorobium/Pelo... 238 1e-61 UniRef50_C1XH61 SSU ribosomal protein S3P n=2 Tax=Meiothermus Re... 238 1e-61 UniRef50_Q04G79 30S ribosomal protein S3 n=3 Tax=cellular organi... 237 2e-61 UniRef50_Q3ZZL8 30S ribosomal protein S3 n=38 Tax=Bacteria RepID... 237 3e-61 UniRef50_Q2GED3 30S ribosomal protein S3 n=2 Tax=Neorickettsia R... 236 4e-61 UniRef50_Q11QB8 30S ribosomal protein S3 n=26 Tax=Bacteria RepID... 235 1e-60 UniRef50_C7H0X5 Ribosomal protein S3 n=8 Tax=Bacteria RepID=C7H0... 234 2e-60 UniRef50_B4U750 30S ribosomal protein S3 n=6 Tax=Bacteria RepID=... 233 4e-60 UniRef50_B3PMP1 30S ribosomal protein S3 n=4 Tax=Mycoplasma RepI... 229 4e-59 UniRef50_B0SA41 30S ribosomal protein S3 n=6 Tax=Leptospira RepI... 229 6e-59 UniRef50_Q8YPI5 30S ribosomal protein S3 n=228 Tax=cellular orga... 228 1e-58 UniRef50_B2KEL5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=... 228 1e-58 UniRef50_A9FGJ7 30S ribosomal protein S3 n=1 Tax=Sorangium cellu... 227 2e-58 UniRef50_C7BEM5 30S ribosomal protein S3, chloroplastic n=2 Tax=... 227 3e-58 UniRef50_D2ISA0 Ribosomal protein S3 n=1 Tax=Cryptomonas paramec... 226 4e-58 UniRef50_C0JWV6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 224 2e-57 UniRef50_Q20F10 30S ribosomal protein S3, chloroplastic n=2 Tax=... 221 1e-56 UniRef50_P19169 30S ribosomal protein S3, chloroplastic n=1 Tax=... 219 8e-56 UniRef50_C0JWQ0 30S ribosomal protein S3, chloroplastic n=1 Tax=... 216 4e-55 UniRef50_P56798 30S ribosomal protein S3, chloroplastic n=103 Ta... 215 6e-55 UniRef50_B7J249 30S ribosomal protein S3 n=23 Tax=Bacteria RepID... 215 9e-55 UniRef50_Q32RN6 30S ribosomal protein S3, chloroplastic n=32 Tax... 209 8e-53 UniRef50_P41205 30S ribosomal protein S3 n=2 Tax=Mycoplasma RepI... 208 1e-52 UniRef50_B1AIM6 30S ribosomal protein S3 n=101 Tax=Bacteria RepI... 208 1e-52 UniRef50_B3CT11 30S ribosomal protein S3 n=2 Tax=Orientia tsutsu... 207 3e-52 UniRef50_Q8M9V0 30S ribosomal protein S3, chloroplastic n=1 Tax=... 202 6e-51 UniRef50_P56365 30S ribosomal protein S3, chloroplastic n=3 Tax=... 199 4e-50 UniRef50_Q601K8 30S ribosomal protein S3 n=6 Tax=Mycoplasma RepI... 199 5e-50 UniRef50_D0EVS4 30S ribosomal protein S3, chloroplastic n=1 Tax=... 197 4e-49 UniRef50_D1J746 30S ribosomal protein S3, chloroplastic n=2 Tax=... 193 5e-48 UniRef50_P0C485 30S ribosomal protein S3, chloroplastic n=72 Tax... 187 2e-46 UniRef50_B7T3V4 30S ribosomal protein S3, chloroplastic n=1 Tax=... 185 8e-46 UniRef50_Q46GA1 30S ribosomal protein S3P n=8 Tax=Euryarchaeota ... 185 1e-45 UniRef50_D2LQE8 Ribosomal protein S3 n=1 Tax=Aciduliprofundum bo... 182 9e-45 UniRef50_Q2WGE8 30S ribosomal protein S3, chloroplastic (Fragmen... 176 5e-43 UniRef50_A0B9W4 30S ribosomal protein S3P n=3 Tax=Archaea RepID=... 176 5e-43 UniRef50_A7I5P5 30S ribosomal protein S3P n=2 Tax=Methanomicrobi... 176 5e-43 UniRef50_C7NV53 Ribosomal protein S3 n=7 Tax=Archaea RepID=C7NV5... 175 9e-43 UniRef50_Q18GF5 30S ribosomal protein S3P n=7 Tax=Euryarchaeota ... 174 3e-42 UniRef50_C0QW02 30S ribosomal protein S3 n=3 Tax=Brachyspira Rep... 171 1e-41 UniRef50_O26116 30S ribosomal protein S3P n=6 Tax=Euryarchaeota ... 170 5e-41 UniRef50_B7T425 30S ribosomal protein S3, chloroplastic n=4 Tax=... 169 5e-41 UniRef50_B2Y1Z8 30S ribosomal protein S3, chloroplastic n=1 Tax=... 169 8e-41 UniRef50_Q06J59 30S ribosomal protein S3, chloroplastic n=1 Tax=... 167 4e-40 UniRef50_P23396 40S ribosomal protein S3 n=252 Tax=root RepID=RS... 166 4e-40 UniRef50_O28360 30S ribosomal protein S3P n=3 Tax=Euryarchaeota ... 166 7e-40 UniRef50_B3V6P6 Ribosomal protein S3 n=1 Tax=uncultured marine g... 165 8e-40 UniRef50_B7ZIJ3 30S ribosomal protein S3, chloroplastic n=1 Tax=... 165 1e-39 UniRef50_C5A280 30S ribosomal protein S3P n=8 Tax=Thermococcacea... 165 1e-39 UniRef50_P58133 Plastid 30S ribosomal protein S3 n=1 Tax=Euglena... 163 4e-39 UniRef50_A4FWB6 30S ribosomal protein S3P n=11 Tax=Methanococcal... 162 7e-39 UniRef50_P48153 40S ribosomal protein S3 n=10 Tax=Eukaryota RepI... 161 2e-38 UniRef50_UPI0001B44297 30S ribosomal protein S3 n=1 Tax=Listeria... 160 3e-38 UniRef50_Q673S3 Ribosomal protein S3 n=4 Tax=environmental sampl... 159 8e-38 UniRef50_C6UN14 Putative 30S ribosomal subunit protein S3 n=1 Ta... 157 2e-37 UniRef50_Q9YF78 30S ribosomal protein S3P n=1 Tax=Aeropyrum pern... 157 2e-37 UniRef50_A2BMC5 30S ribosomal protein S3P n=10 Tax=Thermoprotei ... 155 9e-37 UniRef50_A3DNB3 30S ribosomal protein S3P n=2 Tax=Desulfurococca... 154 2e-36 UniRef50_A1RXG6 30S ribosomal protein S3P n=1 Tax=Thermofilum pe... 154 2e-36 UniRef50_B3V6F1 Ribosomal protein S3 n=2 Tax=environmental sampl... 153 3e-36 UniRef50_A8AA20 30S ribosomal protein S3P n=1 Tax=Ignicoccus hos... 152 1e-35 UniRef50_B3T598 Putative ribosomal protein S3, C-terminal domain... 148 1e-34 UniRef50_Q9HIR5 30S ribosomal protein S3P n=3 Tax=Thermoplasmata... 146 5e-34 UniRef50_A4YCX2 30S ribosomal protein S3P n=3 Tax=Sulfolobaceae ... 145 1e-33 UniRef50_B4S097 30S ribosomal protein S3 n=2 Tax=Alteromonas mac... 145 2e-33 UniRef50_Q8TX35 30S ribosomal protein S3P n=1 Tax=Methanopyrus k... 143 4e-33 UniRef50_UPI000038E231 30S ribosomal protein S3P n=1 Tax=Ferropl... 143 5e-33 UniRef50_Q9G889 Ribosomal protein S3 n=1 Tax=Malawimonas jakobif... 142 1e-32 UniRef50_Q5QJE0 Ribosomal protein S3 n=20 Tax=Spermatophyta RepI... 140 4e-32 UniRef50_UPI0001AEC3A6 30S ribosomal protein S3 n=1 Tax=Alteromo... 139 8e-32 UniRef50_Q1RU61 Bacterial ribosomal protein S3 n=1 Tax=Medicago ... 137 2e-31 UniRef50_B9WLS6 Ribosomal protein, small subunit, putative n=5 T... 137 2e-31 UniRef50_Q38EW1 40S ribosomal protein S3, putative n=2 Tax=Trypa... 137 3e-31 UniRef50_B1L650 Ribosomal protein S3 n=1 Tax=Candidatus Korarcha... 136 5e-31 UniRef50_D2DX72 Ribosomal protein S3 n=1 Tax=Cephalotaxus sinens... 136 7e-31 UniRef50_Q8W9Q9 Ribosomal protein S3 n=1 Tax=Mesostigma viride R... 136 8e-31 UniRef50_D2DX66 Ribosomal protein S3 n=2 Tax=Taxaceae RepID=D2DX... 135 8e-31 UniRef50_D2DX63 Ribosomal protein S3 n=1 Tax=Sciadopitys vertici... 135 9e-31 UniRef50_Q0P3H9 Mitochondrion, complete genome n=1 Tax=Ostreococ... 135 1e-30 UniRef50_Q8SQM3 40S ribosomal protein S3 n=2 Tax=Apansporoblasti... 135 1e-30 UniRef50_Q1XG99 Ribosomal protein S3 n=1 Tax=Physcomitrella pate... 135 1e-30 UniRef50_A3MTL3 30S ribosomal protein S3P n=2 Tax=Thermoproteace... 134 3e-30 UniRef50_D2DX40 Ribosomal protein S3 n=4 Tax=Podocarpaceae RepID... 134 3e-30 UniRef50_Q22AV9 KH domain containing protein n=3 Tax=Oligohymeno... 133 3e-30 UniRef50_A9BL58 Rps3 n=1 Tax=Cryptophyta RepID=A9BL58_9CRYP 133 4e-30 UniRef50_Q05FJ0 30S ribosomal protein S3 n=2 Tax=Candidatus Cars... 133 5e-30 UniRef50_Q85UK5 30S ribosomal protein S3, chloroplastic (Fragmen... 132 9e-30 UniRef50_D2DWK6 Ribosomal protein S3 (Fragment) n=1 Tax=Gnetum m... 132 1e-29 UniRef50_A8B8Z2 Ribosomal protein S3 n=2 Tax=Giardia intestinali... 132 1e-29 UniRef50_A6YEA6 Ribosomal protein S3 n=1 Tax=Chlorokybus atmophy... 132 1e-29 UniRef50_Q95749 Ribosomal protein S3, mitochondrial n=5 Tax=Bras... 131 2e-29 UniRef50_D2DX51 Ribosomal protein S3 n=19 Tax=Cupressaceae RepID... 131 2e-29 UniRef50_C7DIC2 Ribosomal protein S3-domain protein n=1 Tax=Cand... 131 2e-29 UniRef50_P26865 Ribosomal protein S3, mitochondrial n=2 Tax=Marc... 131 3e-29 UniRef50_D2DXC4 Ribosomal protein S3 n=9 Tax=Cupressaceae RepID=... 130 5e-29 UniRef50_B2X260 30S ribosomal protein S3, chloroplastic n=1 Tax=... 130 5e-29 UniRef50_Q06SI4 30S ribosomal protein S3, chloroplastic n=112 Ta... 128 1e-28 UniRef50_A4WIY8 30S ribosomal protein S3P n=4 Tax=Thermoproteace... 128 2e-28 UniRef50_B9TAP3 60S ribosomal protein L16, putative n=2 Tax=Sper... 127 4e-28 UniRef50_C0KT93 Ribosomal protein S3 (Fragment) n=50 Tax=Halimed... 127 4e-28 UniRef50_Q7YAL0 Ribosomal protein S3 n=1 Tax=Chara vulgaris RepI... 127 4e-28 UniRef50_B2X1Z6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 126 5e-28 UniRef50_B2MWV7 Ribosomal protein S3 n=1 Tax=Hemiselmis andersen... 124 2e-27 UniRef50_A2DIM3 Ribosomal protein S3, putative n=2 Tax=Trichomon... 123 4e-27 UniRef50_Q8M1G0 Ribosomal protein S3 n=1 Tax=Chaetosphaeridium g... 121 1e-26 UniRef50_C6FG16 Ribosomal protein S3 n=1 Tax=Isoetes engelmannii... 121 1e-26 UniRef50_Q1KVX7 30S ribosomal protein S3, chloroplastic n=3 Tax=... 121 2e-26 UniRef50_D0FY21 30S ribosomal protein S3, chloroplastic n=1 Tax=... 120 4e-26 UniRef50_P46307 30S ribosomal protein S3, chloroplastic n=3 Tax=... 118 1e-25 UniRef50_A0RVX9 30S ribosomal protein S3P n=2 Tax=Thaumarchaeota... 116 4e-25 UniRef50_O21249 Ribosomal protein S3 n=1 Tax=Reclinomonas americ... 115 9e-25 UniRef50_Q08365 30S ribosomal protein S3, chloroplastic n=2 Tax=... 115 2e-24 UniRef50_Q9TCB0 Ribosomal protein S3 n=1 Tax=Nephroselmis olivac... 114 3e-24 UniRef50_Q5PX34 Ribosomal protein S3 (Fragment) n=73 Tax=Halimed... 114 3e-24 UniRef50_Q9NQS8 Ribosomal protein S3 (Fragment) n=70 Tax=Eukaryo... 113 3e-24 UniRef50_Q5PSC9 Ribosomal protein S3 (Fragment) n=20 Tax=Halimed... 113 4e-24 UniRef50_D0VMX7 Ribosomal protein S3 n=1 Tax=Volvox carteri f. n... 113 5e-24 UniRef50_D2DX78 Ribosomal protein S3 n=2 Tax=Araucariaceae RepID... 113 5e-24 UniRef50_Q5PXB8 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda... 113 6e-24 UniRef50_C5KMP5 40S ribosomal protein S3, putative n=2 Tax=Perki... 112 8e-24 UniRef50_A6YGC6 30S ribosomal protein S3, chloroplastic n=1 Tax=... 112 1e-23 UniRef50_Q74MZ4 30S ribosomal protein S3P n=1 Tax=Nanoarchaeum e... 110 4e-23 UniRef50_Q9G8W8 Ribosomal protein S3 n=1 Tax=Rhodomonas salina R... 110 5e-23 UniRef50_O99993 Ribosomal protein S3 n=1 Tax=Porphyra purpurea R... 108 1e-22 UniRef50_P48938 Ribosomal protein S3, mitochondrial n=1 Tax=Chon... 108 2e-22 UniRef50_Q2EEW0 Plastid 30S ribosomal protein S3 n=1 Tax=Helicos... 107 3e-22 UniRef50_D2DXE7 Ribosomal protein S3 (Fragment) n=1 Tax=Welwitsc... 107 3e-22 UniRef50_C1KRI4 Ribosomal protein S3 n=1 Tax=Micromonas sp. RCC2... 106 5e-22 UniRef50_A4KYC4 Ribosomal protein S3 (Fragment) n=3 Tax=Chrysoba... 106 6e-22 UniRef50_C1KR88 Ribosomal protein S3 n=1 Tax=Micromonas pusilla ... 106 7e-22 UniRef50_Q6E789 Ribosomal protein S3 n=1 Tax=Saprolegnia ferax R... 105 1e-21 UniRef50_D2EEG8 KH type 2 domain protein n=1 Tax=Candidatus Parv... 104 2e-21 UniRef50_P46740 Ribosomal protein S3, mitochondrial n=1 Tax=Prot... 102 1e-20 UniRef50_B7XK37 SSU ribosomal protein S3P n=1 Tax=Enterocytozoon... 101 1e-20 UniRef50_A4ZHA7 Ribosomal protein S3 n=8 Tax=Phytophthora RepID=... 99 1e-19 UniRef50_Q5EM32 Ribosomal protein S3 n=1 Tax=Mortierella vertici... 91 3e-17 UniRef50_Q7YN77 Ribosomal protein S3 n=1 Tax=Eimeria tenella Rep... 86 8e-16 UniRef50_A8J9X5 Predicted protein n=1 Tax=Chlamydomonas reinhard... 86 1e-15 UniRef50_Q01BA3 Putative ribosomal protein (ISS) n=1 Tax=Ostreoc... 85 2e-15 UniRef50_Q9G4C6 Ribosomal protein S3 n=1 Tax=Thraustochytrium au... 83 5e-15 UniRef50_Q5ILK9 Ribosomal protein S3 n=2 Tax=Polysphondylium pal... 83 7e-15 UniRef50_UPI00017EFAFD PREDICTED: hypothetical protein n=1 Tax=S... 81 2e-14 UniRef50_B9GND7 Predicted protein n=2 Tax=rosids RepID=B9GND7_POPTR 80 8e-14 UniRef50_Q6VEE5 Ribosomal protein S3 n=1 Tax=Emiliania huxleyi R... 79 9e-14 UniRef50_Q9MTE3 Ribosomal protein S3 n=1 Tax=Toxoplasma gondii R... 79 1e-13 UniRef50_P46754 Ribosomal protein S3, mitochondrial n=1 Tax=Acan... 79 1e-13 UniRef50_UPI00005A35DE PREDICTED: similar to 40S ribosomal prote... 77 4e-13 UniRef50_Q6UVR6 Ribosomal protein S3 n=1 Tax=Pseudendoclonium ak... 76 8e-13 UniRef50_Q9ZZN7 30S ribosomal protein S3 n=1 Tax=Cyanidioschyzon... 76 1e-12 UniRef50_Q3S286 Ribosomal protein S3 n=1 Tax=Thalassiosira pseud... 74 4e-12 UniRef50_Q25809 Rps3 protein n=1 Tax=Plasmodium falciparum 3D7 R... 74 4e-12 UniRef50_Q23891 ORF1740 n=1 Tax=Dictyostelium discoideum RepID=Q... 72 2e-11 UniRef50_Q33766 Ribosomal protein S3 n=2 Tax=Blastocladiaceae Re... 72 2e-11 UniRef50_Q9AIN3 Ribosomal protein S3 (Fragment) n=2 Tax=Candidat... 72 2e-11 UniRef50_Q9TAJ2 Ribosomal protein S3 n=1 Tax=Cafeteria roenberge... 71 3e-11 UniRef50_UPI0001855078 30S ribosomal protein S3 n=1 Tax=Helicoba... 70 7e-11 UniRef50_A7AXG9 Rps3 n=1 Tax=Babesia bovis RepID=A7AXG9_BABBO 69 1e-10 UniRef50_Q0H8Z0 Ribosomal protein S3, mitochondrial n=1 Tax=Usti... 68 2e-10 UniRef50_C1QG67 SSU ribosomal protein S3P n=1 Tax=Brachyspira mu... 68 2e-10 UniRef50_D1HDP1 Whole genome shotgun sequence of line PN40024, s... 68 2e-10 UniRef50_B0X7L7 40S ribosomal protein S3 n=1 Tax=Culex quinquefa... 68 2e-10 UniRef50_UPI0001859BF7 MRP3 n=1 Tax=Cryptococcus neoformans var.... 68 3e-10 UniRef50_UPI00016B245A 30S ribosomal protein S3 n=1 Tax=candidat... 67 4e-10 UniRef50_Q9MG96 Ribosomal protein S3 n=1 Tax=Chrysodidymus synur... 67 4e-10 UniRef50_B2VQ35 Ribosomal protein S3 n=3 Tax=Dictyostelium citri... 67 5e-10 UniRef50_Q8LNX7 Putative ribosomal protein S3 (Fragment) n=1 Tax... 67 5e-10 UniRef50_Q9G916 Ribosomal protein S3 n=1 Tax=Ochromonas danica R... 64 5e-09 UniRef50_Q4MYB8 Ribosomal protein S3, putative n=1 Tax=Theileria... 62 1e-08 UniRef50_UPI000155D30A PREDICTED: hypothetical protein, partial ... 62 2e-08 UniRef50_D1HRG5 Whole genome shotgun sequence of line PN40024, s... 61 3e-08 UniRef50_Q2TUF7 Ribosomal protein S3 n=18 Tax=Phaeophyceae RepID... 60 5e-08 UniRef50_B2XX96 Ribosomal protein S3 n=1 Tax=Dictyostelium fasci... 60 7e-08 UniRef50_Q9MF63 Orf246 protein n=1 Tax=Beta vulgaris subsp. vulg... 58 3e-07 UniRef50_Q9G8Q4 Ribosomal protein S3 n=1 Tax=Naegleria gruberi R... 58 3e-07 UniRef50_Q3LWD3 Ribosomal protein S3 n=1 Tax=Bigelowiella natans... 57 5e-07 UniRef50_Q3T4C4 Ribosomal protein S3 n=1 Tax=Smittium culisetae ... 57 7e-07 UniRef50_C0KT85 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda... 57 7e-07 UniRef50_B5A4G6 40S ribosomal protein S3 n=1 Tax=Gymnochlora ste... 54 5e-06 UniRef50_Q2TUB8 Ribosomal protein S3 n=1 Tax=Dictyota dichotoma ... 53 5e-06 UniRef50_A4XIG3 PpiC-type peptidyl-prolyl cis-trans isomerase n=... 51 4e-05 UniRef50_B9SHX4 Chloroplast 30S ribosomal protein S7, putative n... 48 2e-04 Sequences not found previously or not previously below threshold: UniRef50_B0X1S2 Ribosomal protein S3 n=1 Tax=Culex quinquefascia... 71 3e-11 UniRef50_C5LNU7 Putative uncharacterized protein n=1 Tax=Perkins... 47 4e-04 UniRef50_D2XDV4 Orf 195 n=1 Tax=Pneumocystis carinii RepID=D2XDV... 45 0.002 UniRef50_Q9G9H3 Ribosomal protein S3 n=1 Tax=Schizophyllum commu... 42 0.012 UniRef50_B5SQ51 Ribosomal protein S3 n=1 Tax=Blastocystis sp. DM... 42 0.017 UniRef50_P92511 Uncharacterized ribosomal S3-like protein AtMg00... 41 0.037 UniRef50_UPI00006CD8A3 hypothetical protein TTHERM_00522130 n=1 ... 41 0.044 >UniRef50_Q12GW5 30S ribosomal protein S3 n=397 Tax=Bacteria RepID=RS3_POLSJ Length = 301 Score = 272 bits (695), Expect = 8e-72, Method: Composition-based stats. Identities = 147/232 (63%), Positives = 180/232 (77%), Gaps = 2/232 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P G RL + + W S W+A+ ++FA L D KVR+YL +L A+VSR++IERP Sbjct: 1 MGQKINPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRVLIERP 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 AK+ R+TI +ARPG+VIGKKGED+E L+K ++ GVP +NI EVRKPE+DAKL+ADSI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELSRQLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 T QLE+R+MFRRAMKRA+QNAMRLGA GIK+ SGRL G EIAR EWYREGRVPLHTLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGR 232 DIDY TSEA TTYGVIGVKVW++KG+ LG K A P ++RK R Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGR--GESPGAKLDAAPSDEERKPR 230 >UniRef50_B5YDU9 30S ribosomal protein S3 n=194 Tax=Bacteria RepID=RS3_DICT6 Length = 245 Score = 271 bits (693), Expect = 1e-71, Method: Composition-based stats. Identities = 116/231 (50%), Positives = 158/231 (68%), Gaps = 3/231 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK HP G RLGI K W S W+A +++ L D+ +R YL K +A +S I IER Sbjct: 1 MGQKTHPYGFRLGITKDWKSHWYAERSDYSSLLHEDWAIRNYLKKNYYQAGISLIEIERK 60 Query: 61 A-KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 A + +TIHTARPG++IG+ G ++E +RK + + +N+ EV+ PELDA+LVA++ Sbjct: 61 AANRVDITIHTARPGMLIGRGGSEIENIRKNLIKLTNKNVFVNVQEVKNPELDAQLVAEN 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+E+R+ ++RAMK+A+ A+R GAKGIKV SGRL GAEIAR+EW+REGR+PL TL Sbjct: 121 IAMQIEKRINYKRAMKQAINRALRAGAKGIKVMCSGRLNGAEIARSEWFREGRIPLQTLT 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEIL--GGMAAVEQPEKPAAQPKKQQ 228 ADIDY +EA T GVIGVKVWI+KG++ A E PEK + + + Sbjct: 181 ADIDYGFAEAFTISGVIGVKVWIYKGDVPELHKEAIQELPEKAVPKKIEDE 231 >UniRef50_Q0RRR5 30S ribosomal protein S3 n=406 Tax=cellular organisms RepID=RS3_FRAAA Length = 350 Score = 269 bits (687), Expect = 6e-71, Method: Composition-based stats. Identities = 115/218 (52%), Positives = 160/218 (73%), Gaps = 1/218 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P+G RLGI + S W+A+ K++ + D K+R+ +++ + +A +SR+ IER Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +RV IHTARPGIVIG++G + +++R + + G Q+NI EV+ PE+DA+LVA + Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL RV FRRAM++A+Q AM+ GAKGI+V+ SGRLGGAE++R+E+YREGRVPLHTLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE 218 DIDY EA T +G IGVKVWI+KG+I+ A E E Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDIVQSRAEREAQE 217 >UniRef50_B2T745 30S ribosomal protein S3 n=167 Tax=cellular organisms RepID=RS3_BURPP Length = 268 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 142/233 (60%), Positives = 177/233 (75%), Gaps = 6/233 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G RL + + W S W+AN FA L D VR+YL K+L ASV R+VIERP Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 AK+ R+TI ++RPG+VIGKKGED+E L+ + GVP +NI E+RKPE DA+L+ADSI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 T QLERR+MFRRAMKRA+QNAMRLGA+GIK+ +GRL G EIARTEWYREGRVPLHTLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 DIDY TSEA TTYG+IGVKVW++KG+ LG + P + ++++ R+ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRN------DAPVVEEVAEEKRPRR 227 >UniRef50_Q01W98 30S ribosomal protein S3 n=172 Tax=Bacteria RepID=RS3_SOLUE Length = 344 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 123/208 (59%), Positives = 157/208 (75%), Gaps = 1/208 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG KPW S WFA + +A L D +++ L + L A VS I ++RP Sbjct: 1 MGQKVHPYGFRLGFNKPWRSRWFA-KQGYAKLLQEDLELKAALRERLKSAGVSSIEVDRP 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +RVTI T+RPGI+IG+KG ++EKL++ +A I+I EV KPELDA+LV++SI Sbjct: 60 GNKLRVTIRTSRPGIIIGRKGAEIEKLKQDMAKKTKREVFIDIQEVHKPELDAQLVSESI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLE+RV FRRAM++AV +A+R G KGIKV VSGRL GAEIAR+EWY +G++PLHTLRA Sbjct: 120 ALQLEKRVAFRRAMRKAVDSALRFGCKGIKVRVSGRLNGAEIARSEWYLQGQLPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 DIDY +EAHTTYGVIG+K W++KGEIL Sbjct: 180 DIDYGFAEAHTTYGVIGIKAWLYKGEIL 207 >UniRef50_C9KPB3 Ribosomal protein S3 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPB3_9FIRM Length = 222 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 128/219 (58%), Positives = 165/219 (75%), Gaps = 1/219 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P+GIRLGIVK W++ W+A+ K+FADNL D K+R YL L A VSRI ER Sbjct: 1 MGQKVNPHGIRLGIVKTWDAKWYAD-KDFADNLHEDIKIRDYLKNSLQAAGVSRIETERS 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +++TIHTA+PG+VIG+ G +E++++ + + INIAE+++P++DA LVA++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKNYTTKRVDINIAEIKQPDMDATLVAENI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLERR+ FRRAMK+AV MRLGAKGIK+ SGRLGGAEIAR E YREG +PLHTLRA Sbjct: 120 AQQLERRIAFRRAMKQAVGRTMRLGAKGIKIACSGRLGGAEIARKESYREGSIPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEK 219 DIDY T+EAHTTYG IG+KVWIFKGE+L + + Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPERKQAKTAAE 218 >UniRef50_C6XHI5 30S ribosomal protein S3 n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHI5_LIBAP Length = 227 Score = 254 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 110/219 (50%), Positives = 152/219 (69%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEK 219 IDY T+ A T YG G+KV++ + + + + Sbjct: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 >UniRef50_C7M2X8 Ribosomal protein S3 n=2 Tax=Bacteria RepID=C7M2X8_ACIFD Length = 288 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 126/221 (57%), Positives = 161/221 (72%), Gaps = 2/221 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG+ W S W+A+ K++ L D ++RQ+L +EL ASVSR+ IER Sbjct: 1 MGQKVHPYGFRLGVTTDWKSRWYAD-KDYQRWLIEDEQIRQWLQRELRTASVSRVDIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVAD-IAGVPAQINIAEVRKPELDAKLVADS 119 +RV IHTARPGIVIGKKG +VE+LR+ + A Q+N+ E+R+P+LDA +VA S Sbjct: 60 RDRVRVDIHTARPGIVIGKKGVEVERLRRELERRCAPARVQLNVEEIRQPDLDATIVAQS 119 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ RRV FRRAMKRA+Q AM+ GA+GI + SGRLGGAE+AR E +REGRVP HTLR Sbjct: 120 IADQISRRVSFRRAMKRAIQVAMKEGARGITAQCSGRLGGAEMARRETHREGRVPRHTLR 179 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKP 220 ADID+ EA TTYG IGVKVWI+KG+++ QP++P Sbjct: 180 ADIDFGLREARTTYGQIGVKVWIYKGDVVPYQTLTSQPQRP 220 >UniRef50_B2S2E2 30S ribosomal protein S3 n=2 Tax=Treponema pallidum RepID=RS3_TREPS Length = 247 Score = 250 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 2/235 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK--ELAKASVSRIVIE 58 MGQKV P G+RLGI K W+S W+A +E+A L D ++R + E A ++ + I Sbjct: 1 MGQKVSPIGLRLGINKVWSSRWYAGPREYAALLHEDLRIRSMIRSFPECKNADIAEVEIV 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVAD 118 R + + V +HTARPG+VIG KG ++EK+ V QI + E+++ EL+A LVA Sbjct: 61 RHPQRVTVVMHTARPGVVIGAKGVNIEKIGAEVQKRLNKKVQIKVKEIKRMELNAYLVAQ 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 ++ QL RV FR+ +++A M+ GA+G+K+ VSGRLGGAE++RTE +EGR PLHTL Sbjct: 121 NVARQLTARVSFRKCLRQACAGTMKSGAQGVKIRVSGRLGGAEMSRTEEIKEGRTPLHTL 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 RADIDY +EAHTTYG IGVKVW++ G + G + ++ +K + Sbjct: 181 RADIDYGFAEAHTTYGSIGVKVWLYSGMMYGNECRKDVGSLLRRSRRESGQKSDE 235 >UniRef50_Q1IX78 30S ribosomal protein S3 n=2 Tax=Deinococcus RepID=RS3_DEIGD Length = 248 Score = 249 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 116/234 (49%), Positives = 157/234 (67%), Gaps = 6/234 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++PNG RLGI K WNS W+A K+++ L D K+R+ ++++LA A ++RI IER Sbjct: 1 MGNKINPNGFRLGITKGWNSRWYAGKKQYSQLLKEDEKIRKLVSQKLAAAGIARIEIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADS 119 + + V I A+PGIVIGK GE +++LR + + +N+AE+ P + A LVA Sbjct: 61 GQQVNVIISAAKPGIVIGKGGESIKQLRGEIERLVSAGTVAVNVAEIPNPNISAPLVALR 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ERR FRRAMK+A Q M GA+G+KV +SGRLGGAE ARTE EGRVPLHTLR Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 ADIDY T+ A TTYG +G+KV +F GE++GG + E A P+K + R+ Sbjct: 181 ADIDYGTARAETTYGSLGIKVLVFNGEVIGG-----KTETLARPPRKSDERRRE 229 >UniRef50_UPI0001C30EBD ribosomal protein S3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30EBD Length = 395 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 119/213 (55%), Positives = 151/213 (70%), Gaps = 1/213 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP +R+G + W S WF+ K F+D L D +R ++ L+ A +S I I + Sbjct: 1 MGQKVHPESLRVGYIHDWKSNWFS-EKNFSDYLVEDEAIRNHIVGRLSHAGLSDITIRKN 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 A + V I+TARPGIVIGK G +V+ LR+ + I ++NI E+++PELDA+LVA SI Sbjct: 60 ANEVEVNINTARPGIVIGKSGSEVDALRRDLHRITNKQVKVNILEIKRPELDARLVAQSI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL+ RV FRRAMKRA+ +AMR GAKG+KV+VSGRLGGAE+ARTE Y +GRVPLHTLRA Sbjct: 120 AEQLQNRVAFRRAMKRALTSAMRSGAKGVKVQVSGRLGGAEMARTEGYSDGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAA 213 DIDY EA TT+G IGVK WI KGEI+ Sbjct: 180 DIDYGFHEARTTFGRIGVKCWINKGEIMPEGYT 212 >UniRef50_C1KRC6 30S ribosomal protein S3, chloroplastic n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1KRC6_9CHLO Length = 227 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 98/232 (42%), Positives = 149/232 (64%), Gaps = 7/232 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G R+G+ + S WFA K++A+ + D +R Y+ K L+ AS+SR+ I R Sbjct: 1 MGQKVHPLGFRIGVTQTHRSQWFAKPKDYANLVKEDLVIRDYVAKHLSDASISRVNISRQ 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP--AQINIAEVRKPELDAKLVAD 118 I + TARP ++G KGE + K+R+ ++ + + + +PE+DA +A+ Sbjct: 61 VDRIEIEFFTARPRALVGAKGEALVKVREALSAKLPAHRSVALYVTKTVQPEVDAVCIAE 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 +I QLE+R FRR +++A+++A + GA GIKV+++GRL GAEIAR+EW REGRVPLHT+ Sbjct: 121 NIAMQLEKRAPFRRTIRQALRSAQQAGAVGIKVKIAGRLNGAEIARSEWSREGRVPLHTI 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 RADIDY T+ A T YG++G+KVW+ K +P+ A+ P + + Sbjct: 181 RADIDYATARALTVYGILGIKVWVCK-----DDTERFKPQPSASAPSGSEGR 227 >UniRef50_C1CXG0 30S ribosomal protein S3 n=61 Tax=Bacteria RepID=RS3_DEIDV Length = 248 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 111/232 (47%), Positives = 153/232 (65%), Gaps = 5/232 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++PNG RLGI + WNS W+A K++A L D K+R+ + K+L+ A ++R+ IER Sbjct: 1 MGNKINPNGFRLGITRGWNSRWYAGKKQYAGLLKEDEKIRKLVDKKLSAAGIARVEIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADS 119 + + V I A+PGIVIGK G+ +++LR + + +N+AE+ P + A LVA Sbjct: 61 GQQVNVIISAAKPGIVIGKGGDSIKQLRADIEKLVSAGTVAVNVAEIPNPNISAPLVALR 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ERR FRRAMK+A Q M GA+G+KV +SGRLGGAE AR E REGRVPLHTLR Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVVLSGRLGGAEQARRETVREGRVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKG 231 ADIDY T+ A TTYG++G+KV +F GE++GG Q + +R+ Sbjct: 181 ADIDYGTALARTTYGILGIKVMVFTGEVIGGRTETI----ARPQRRNDERRP 228 >UniRef50_Q3KLH5 30S ribosomal protein S3 n=13 Tax=Chlamydiaceae RepID=RS3_CHLTA Length = 224 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 116/212 (54%), Positives = 149/212 (70%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK P G R + K W S W+ N +EF L D K+R++L K+ + + V++R Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + I VTIHTARPG+VIGKKG +VE L+ + + G + IAEV++PEL+A+LVAD I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+ERRV FRRAMK+A+Q+ M GA G+KV+VSGRL GAEIAR+EWY+ GRVPLHTLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMA 212 DIDY T+ A TTYG+IG+KVWI E A Sbjct: 181 DIDYATASAETTYGIIGIKVWINLSEKKAVPA 212 >UniRef50_A8PNP8 Ribosomal protein S3 n=2 Tax=Gammaproteobacteria RepID=A8PNP8_9COXI Length = 263 Score = 244 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 129/234 (55%), Positives = 164/234 (70%), Gaps = 1/234 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANT-KEFADNLDSDFKVRQYLTKELAKASVSRIVIER 59 MG KV+P GIRLGI + + W+A +E+ADNL D R+ + K L +A VS I IER Sbjct: 1 MGHKVNPVGIRLGITRTSTARWYAKKSREYADNLYYDLSARKLIEKALLQAGVSSIQIER 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 A+ ++TI A+PG+VIGKKGE +++LR + I VP ++++ EV+KPELDAKLVA++ Sbjct: 61 AARKSKITISVAKPGVVIGKKGEYIDQLRDQLEKIMRVPVRLSVLEVKKPELDAKLVAEN 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I QLERRVMFRRAMKRAVQ A+RLGA GIK+ V+GRLGGAEIAR+E Y+EG VPLHT R Sbjct: 121 IAQQLERRVMFRRAMKRAVQTALRLGALGIKITVAGRLGGAEIARSERYQEGSVPLHTFR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 ADIDY +EA TTYG +GVKVWI+KGE+ A R +K Sbjct: 181 ADIDYALAEAQTTYGKLGVKVWIYKGEVFDRSKISSLETAEAKTQFLDDRNKKK 234 >UniRef50_B4CUY0 Ribosomal protein S3 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUY0_9BACT Length = 251 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 116/220 (52%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G RL + + W S W+A+ KE D L+SD K+R+Y+ +L A+VS+IVIER Sbjct: 1 MGQKVNPIGYRLAVNRDWRSRWYASPKELPDFLNSDLKIRRYVKDKLRLAAVSKIVIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG-VPAQINIAEVRKPELDAKLVADS 119 SIRVTI TARPGIVIG+KG ++E + K + ++ +I+I E++ PELDA+LVA++ Sbjct: 61 WNSIRVTIFTARPGIVIGRKGTEIENMTKEIERLSNGKSVKIDIQEIKTPELDAQLVAEN 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 + Q+ERR+ FRRAMK+++Q M GA+GIK+ +GRLGGAEI+R EWYREG++PLHTLR Sbjct: 121 VALQIERRISFRRAMKKSIQQTMEFGAQGIKLRCAGRLGGAEISRAEWYREGKIPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEK 219 IDY +EA+T YG IGVK W+ K E ++ EK Sbjct: 181 QPIDYGFAEANTVYGKIGVKCWLCKPEGANEPQPADKEEK 220 >UniRef50_A6LEI5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=RS3_PARD8 Length = 244 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 117/211 (55%), Positives = 159/211 (75%), Gaps = 1/211 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P RLGI++ W+S W+ K + D L D K+R+YL LAKASVSRIVIER Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWYGG-KNYGDTLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K I +T+ T+RPGI+IGK G++V+KL++ + I QINI EV++PELDA +VA++I Sbjct: 60 LKLITITVCTSRPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QLE ++ +RRA+K A+ + MR+GA+GIK+++SGRL GAE+AR+E Y+EGR PLHTLRA Sbjct: 120 ARQLEGKIAYRRAVKMAIASTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGM 211 DIDY +EA T G++GVKVWI +GE+ G Sbjct: 180 DIDYALAEALTKVGLLGVKVWICRGEVYGKR 210 >UniRef50_D2QSG4 Ribosomal protein S3 n=15 Tax=Bacteria RepID=D2QSG4_9SPHI Length = 302 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 127/227 (55%), Positives = 172/227 (75%), Gaps = 1/227 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P G+RLGIV+ W S+W+ KEF++ L D K+R+Y+ + K +++R+VIER Sbjct: 1 MGQKINPVGLRLGIVRGWESSWYGG-KEFSEKLVEDEKIRKYVAARIPKGAIARVVIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K + +TIHTARPGIVIGK G +V+K+++ + I G QINI E+++PE+DAKLV ++I Sbjct: 60 LKRVTLTIHTARPGIVIGKGGGEVDKIKEELKKITGKDVQINIFEIKRPEIDAKLVGEAI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL+ R+ FRRAMK+A+Q+A+R+GA+GIKV+VSGRLGGAEIAR+E Y+EGRVPLHTLRA Sbjct: 120 AQQLQARISFRRAMKQAIQSAIRVGAQGIKVKVSGRLGGAEIARSEQYKEGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQ 227 DIDY SEA T YG IG+KVWIFKGE+ G AQ ++ Sbjct: 180 DIDYAISEAQTVYGKIGIKVWIFKGEVYGKRDLSPAAMMSQAQAGER 226 >UniRef50_A9NED9 30S ribosomal protein S3 n=175 Tax=Bacteria RepID=RS3_ACHLI Length = 256 Score = 239 bits (609), Expect = 8e-62, Method: Composition-based stats. Identities = 111/238 (46%), Positives = 157/238 (65%), Gaps = 6/238 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER- 59 MGQK +PNG+RLGI++ W S W+A+ K+ + D +R++L + +KA VS+I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESKWYADQKDVPALIKEDALIREFLNENFSKAGVSQIEIERV 60 Query: 60 ---PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLV 116 + + + ++ ++PGI +GK+ K + + +NI EVR+PE A LV Sbjct: 61 KAKSKERVTIKLYVSKPGIALGKEASVKNKAVSTLEYLTKKEVILNIIEVRRPEKVAVLV 120 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 A SI QLE R FRRA K A+Q A++ GAKGI+ VSGRLGGAE+AR+E Y EGRVPLH Sbjct: 121 AQSIAEQLENRASFRRAQKMAIQRALKSGAKGIRTLVSGRLGGAEMARSEGYSEGRVPLH 180 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAA--VEQPEKPAAQPKKQQRKGR 232 TLRAD+DY T+EA TTYG++G+KVWI+ GE+L G + +P + Q + Q+R+ R Sbjct: 181 TLRADVDYATAEAKTTYGILGIKVWIYHGEVLPGQSILDTRKPFEAGNQKRGQKRRPR 238 >UniRef50_Q7UN14 30S ribosomal protein S3 n=5 Tax=Planctomycetaceae RepID=RS3_RHOBA Length = 236 Score = 238 bits (608), Expect = 9e-62, Method: Composition-based stats. Identities = 99/236 (41%), Positives = 147/236 (62%), Gaps = 5/236 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKE-----LAKASVSRI 55 MGQKV+P R G+ + W S W+A+ ++FAD L D K+R+++TK A + RI Sbjct: 1 MGQKVNPIAFRTGVTRGWGSRWYASKQDFADLLVEDRKIREFITKHPKKSQYKSAGIDRI 60 Query: 56 VIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKL 115 IER +RV ++ ARPG++IGKKG+++E L+ + ++ G + + EV +PEL A+L Sbjct: 61 EIERTRDEVRVMLYVARPGLIIGKKGQEIEILQAELQNLVGRRINLKVEEVGRPELQAQL 120 Query: 116 VADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPL 175 VA+ I+ QL +R FRR MKR ++ M GAKGIK++++GRLGGAE+AR E G +PL Sbjct: 121 VAEDISQQLAKRSSFRRTMKRMLEQTMDAGAKGIKIQMAGRLGGAEMARREKQSAGSIPL 180 Query: 176 HTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKG 231 TL+A IDY +EA T G IG++VWI +G + A++ K+ K Sbjct: 181 STLQAKIDYGFTEAMTPQGHIGIQVWINQGTYGDDNDGADAQTGQASKKPKRSYKR 236 >UniRef50_Q3APH9 30S ribosomal protein S3 n=8 Tax=Chlorobium/Pelodictyon group RepID=RS3_CHLCH Length = 253 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 105/232 (45%), Positives = 162/232 (69%), Gaps = 4/232 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--ASVSRIVIE 58 MGQKV+P G RLGI++ W S W+ ++ ++ + D +R Y+ L K A ++RI IE Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVISEKIKQDHIIRNYVLARLKKERAGIARINIE 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVAD 118 R K +++ I+ ARPG V+G+KGE++ L + ++ I G +I++ EV KPE++A+L+ + Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELSRIIGKEVKIDVVEVIKPEIEAQLIGE 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 +I QLE RV FRRAMK+A+Q AMR GA+G+++ +GRLGGAEIAR E Y+EG++PLHT+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 RA++DY + AHT G IG+KVW++KGE+L + ++ E+ + K +R Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVL--VQRIDAIEEDEMKKMKDRRN 230 >UniRef50_C1XH61 SSU ribosomal protein S3P n=2 Tax=Meiothermus RepID=C1XH61_MEIRU Length = 253 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 109/237 (45%), Positives = 153/237 (64%), Gaps = 4/237 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++P G+RLGI + + S W+A K +A L+ D +R + KEL +A ++RI IER Sbjct: 1 MGNKINPVGLRLGITRDFESRWYAGKKAYAKTLEEDRLIRALIEKELHQAGLARIDIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA-GVPAQINIAEVRKPELDAKLVADS 119 A ++ V ++ A+PG+VIG+ GE +++LR+ + G +N+ EV P L A LVA Sbjct: 61 ADNVTVMVYAAKPGVVIGRGGETIKRLRETLQSRFPGKTVALNVQEVGNPNLSAPLVAQR 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 + Q+ERR RR++K+AVQ GA G K+ VSGR+GGAE AR EW EGRVPLHTLR Sbjct: 121 VAEQIERRFAVRRSIKQAVQRVRESGALGAKIVVSGRIGGAEQARVEWAAEGRVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAV---EQPEKPAAQPKKQQRKGRK 233 A+IDY T+ A TTYG +GVK ++F GE++GG V +PAA + Q K R+ Sbjct: 181 ANIDYGTARAETTYGSLGVKAYVFMGEVIGGKKVVPGAAPAARPAAPKRDQDGKPRR 237 >UniRef50_Q04G79 30S ribosomal protein S3 n=3 Tax=cellular organisms RepID=RS3_OENOB Length = 267 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 111/223 (49%), Positives = 150/223 (67%), Gaps = 7/223 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK++P G R+G+++ W++ W+A+ KE+ L D ++R+YL L A+V RI IER Sbjct: 1 MGQKINPIGFRVGVIRDWDAKWYADKKEYVPALQEDLRIRKYLETNLKDAAVDRITIERT 60 Query: 61 -AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG------VPAQINIAEVRKPELDA 113 I +TIHTA+PGIVIG+ G DVE+LR ++ I INI E+RKP+L+A Sbjct: 61 EPTRINLTIHTAKPGIVIGRGGADVERLRSELSKIVDTYKGQHKRVNINIVEIRKPDLNA 120 Query: 114 KLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 LV I + LERRV FRRAM+ A+Q R GAKG++ VSGRL GA+IAR E Y EG V Sbjct: 121 HLVGQQIAADLERRVAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTV 180 Query: 174 PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQ 216 PLHTLRADIDY+ EA T+YG +G+K WI++G+ G ++ Sbjct: 181 PLHTLRADIDYSWDEAMTSYGNLGIKTWIYRGDAENGQFIKDE 223 >UniRef50_Q3ZZL8 30S ribosomal protein S3 n=38 Tax=Bacteria RepID=RS3_DEHSC Length = 278 Score = 237 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 111/218 (50%), Positives = 156/218 (71%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG+KVHP G RLGI+K W++ W A+ K FA+ L D K+R+ ++K+ A++S++ IER Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKNFAECLTEDLKLRKAISKKYVDAAISQVDIERQ 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + + V++ TARPGIVIG+ G+ V+++R + D+ G Q+NI E+ + ELDA LVA S+ Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEDLIGKKVQLNIVEISQAELDAFLVARSV 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+ERRV +RRAMK+A+ +M+ GAKGIK+ SGRLGG EIAR E EGRVPLHTLRA Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKICASGRLGGVEIARREVMHEGRVPLHTLRA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE 218 DIDY + AHT G +G+KVW+++G+IL + E Sbjct: 181 DIDYGCTRAHTALGDVGIKVWVYRGDILPEAKEKSESE 218 >UniRef50_Q2GED3 30S ribosomal protein S3 n=2 Tax=Neorickettsia RepID=RS3_NEOSM Length = 211 Score = 236 bits (602), Expect = 4e-61, Method: Composition-based stats. Identities = 100/209 (47%), Positives = 137/209 (65%), Gaps = 1/209 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G RL S W++ + ++A + D+ V +Y+ A +S+++I+R Sbjct: 1 MGQKVNPVGFRLWTHGSHGSVWYSKSCDYAKTVAEDYFVTKYVESSFAHIGISKVIIKRK 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 S +T+H +PG++IGKKG D+E R + G +N+ EV+KP A LVA SI Sbjct: 61 GASCDITLHCMKPGLIIGKKGADLESFRLKLNKKFGFVPSLNVVEVKKPNSSAVLVAKSI 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMR-LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 QLE+R FRR +K+A+ MR KG+KV SGRL GAEIARTE ++EG +PLHT+R Sbjct: 121 AFQLEKRSSFRRVIKKAIATVMRESDVKGVKVACSGRLSGAEIARTEVFKEGSIPLHTMR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 ADIDY +EAHTTYGVIGVKVWI++G I Sbjct: 181 ADIDYWVAEAHTTYGVIGVKVWIYRGNIF 209 >UniRef50_Q11QB8 30S ribosomal protein S3 n=26 Tax=Bacteria RepID=RS3_CYTH3 Length = 254 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 118/211 (55%), Positives = 159/211 (75%), Gaps = 1/211 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G RLG+VK W S W+ K FAD L D ++R+Y+ + K +S+IVIER Sbjct: 1 MGQKVNPIGFRLGVVKGWESNWYGG-KTFADKLVEDEQIRKYVLARIPKGGISKIVIERT 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 K + +TI+TARPG+VIGK G +V+K+++ + I G QINI E+++PE++A LV +SI Sbjct: 60 IKRVTLTINTARPGVVIGKGGAEVDKIKEELKKITGKDVQINIFEIKRPEMEALLVGESI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 QL+ R+ +RRAMK+A+ MR+GA GIK+++SGRLGGAE+ART+ Y+EGR+PLHTLRA Sbjct: 120 AQQLKARISYRRAMKQAIAGTMRVGALGIKIKLSGRLGGAEMARTDQYKEGRIPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGM 211 DIDY SEA T YG IG+KVWIFKGE+ G Sbjct: 180 DIDYAVSEALTVYGKIGIKVWIFKGEVYGKR 210 >UniRef50_C7H0X5 Ribosomal protein S3 n=8 Tax=Bacteria RepID=C7H0X5_9FIRM Length = 300 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 116/230 (50%), Positives = 157/230 (68%), Gaps = 3/230 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV P+G+R+GI K W S W+A+ K FAD L D +R+++ +L A VS+I+IERP Sbjct: 1 MGQKVSPHGLRVGINKEWGSKWYADKKSFADFLAEDKAIREHVKTKLYGAGVSKILIERP 60 Query: 61 A-KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 A ++V I R G+VIGK G+ E ++K +A + G ++I +V + ELDA+L A+ Sbjct: 61 AEDKVKVIIAVGRSGMVIGKGGDGHEAIKKSLAKLTGKEVAVDIRQVGRTELDAQLTAER 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I LE+RV +RRAMK+A+ AM+ GAKGIK+ VSGRLGGAEIAR E Y EG VPLHTLR Sbjct: 121 IAEDLEKRVSYRRAMKQAMGRAMKAGAKGIKLLVSGRLGGAEIARDEKYSEGNVPLHTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEILGG--MAAVEQPEKPAAQPKKQ 227 +DIDY +EA TTYG +GVK+WI GEIL + + +K +P + Sbjct: 181 SDIDYGFAEADTTYGKLGVKIWINHGEILDKGLQDLIREEKKDGRKPTGK 230 >UniRef50_B4U750 30S ribosomal protein S3 n=6 Tax=Bacteria RepID=RS3_HYDS0 Length = 231 Score = 233 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 108/230 (46%), Positives = 159/230 (69%), Gaps = 3/230 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK HP G R+G+ K W S W + KE+ + L D +R+Y+ + A +S++ IER Sbjct: 1 MGQKTHPIGFRIGVTKDWLSKWCTSKKEYPNTLHEDIVIRKYIKERYKSAGISKVTIERS 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA-GVPAQINIAEVRKPELDAKLVADS 119 + IRV I +++PGI+IG+KG +V++L+ + I +++ EVR P+LDA+LVA+ Sbjct: 61 GEKIRVRILSSKPGIIIGRKGAEVDQLKNDLERIVKNKDISLSVDEVRVPQLDAQLVAED 120 Query: 120 ITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR 179 I Q+ERRV RRAMKRA+ NA++ GAKGIKV+V GR+GGA++AR EW+ GR+PL TLR Sbjct: 121 IALQIERRVSHRRAMKRAIDNAIKSGAKGIKVQVKGRIGGADLARAEWFLVGRMPLQTLR 180 Query: 180 ADIDYNTSEAHTTYGVIGVKVWIFKGEIL--GGMAAVEQPEKPAAQPKKQ 227 ADIDY + A+T YG++G+KVWI+KG+IL G +++ E+ K+ Sbjct: 181 ADIDYGYATAYTKYGILGIKVWIYKGDILKGGKEEIMKKIEEDLVSQAKE 230 >UniRef50_B3PMP1 30S ribosomal protein S3 n=4 Tax=Mycoplasma RepID=RS3_MYCA5 Length = 247 Score = 229 bits (585), Expect = 4e-59, Method: Composition-based stats. Identities = 98/236 (41%), Positives = 145/236 (61%), Gaps = 4/236 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+PNG R GI K NS W+A+ +FA +L D K+ + K++ + + + I+R Sbjct: 1 MGQKVNPNGFRYGITKAHNSVWYADKMQFASHLLEDQKIYDFFDKKVRQLQIGNVQIKRN 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV---PAQINIAEVRKPELDAKLV 116 I + ++TA+P +++G GE+++ L K + I I + E++KP+L+A+L+ Sbjct: 61 QNGLILIYVYTAKPAVMLGTNGENIKNLTKDLQKILKNKKANISIQVIELKKPDLNARLL 120 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 A+ I +LE R FR A K A++ A++ GAKGIK VSGRL G ++ARTE Y EG + LH Sbjct: 121 AEDIAIKLENRGSFRLAQKFAIKAALKAGAKGIKTSVSGRLNGVDMARTEGYNEGEMKLH 180 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGR 232 TLR D+DY + A TTYG++GVKVW+ GEIL +Q E K +R R Sbjct: 181 TLRQDVDYAATTAKTTYGILGVKVWVSLGEILSDEQKAKQEEMDLLNAPKDRRVRR 236 >UniRef50_B0SA41 30S ribosomal protein S3 n=6 Tax=Leptospira RepID=RS3_LEPBA Length = 225 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 101/222 (45%), Positives = 156/222 (70%), Gaps = 1/222 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P G+R+GI + W+S WF+ +++ NL D K+R++L K+ ASV +I+IER Sbjct: 1 MGQKVNPIGLRIGITRNWDSVWFS-KQDYIKNLHEDIKIRRFLQKKFKNASVVKIIIERF 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + I V +HT++PG+VIG+KG+++E +++ + A P +NI EV+KPE+ A+ +A+++ Sbjct: 60 PEKINVNLHTSKPGMVIGQKGQNIEAVKQELKKFADKPIGMNIIEVKKPEIIAQAIAETV 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+E+R+ FRR MK ++ AMR G +G+K+++SGRL GA++ARTE Y EGRVPLHTLRA Sbjct: 120 ALQIEQRMPFRRVMKAELRRAMRGGVEGVKIQISGRLNGADMARTEKYMEGRVPLHTLRA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAA 222 ID+ EA TT+G IGVKVW + G+ ++ + Sbjct: 180 KIDFGFKEALTTFGQIGVKVWTYTGDYFPTKEESDEDKYAVK 221 >UniRef50_Q8YPI5 30S ribosomal protein S3 n=228 Tax=cellular organisms RepID=RS3_ANASP Length = 260 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 110/219 (50%), Positives = 149/219 (68%), Gaps = 7/219 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL-----AKASVSRI 55 MGQK+HP G RLGI + S WFA + + L D K+RQY+ ++L A +S + Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAEPSRYPELLQEDHKLRQYIEQKLGRLAQNNAGISEV 60 Query: 56 VIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA--GVPAQINIAEVRKPELDA 113 IER A I + + TARPG+V+G+ G+ +E LR + + +IN+ EV++ + DA Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIEALRTGLQTLLGGNRQIRINVVEVQRVDADA 120 Query: 114 KLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 L+A+ I QLERRV FRR +++A+Q A + G +GIKV+VSGRL GAEIARTEW REGRV Sbjct: 121 YLIAEFIAQQLERRVSFRRVVRQAIQRAQKAGIQGIKVQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMA 212 PLHTLRADIDY+ A T YG++G+KVW+FKGEI+ G Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQE 219 >UniRef50_B2KEL5 30S ribosomal protein S3 n=9 Tax=Bacteria RepID=RS3_ELUMP Length = 239 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 106/205 (51%), Positives = 140/205 (68%), Gaps = 1/205 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K++P G+RLG + W S WFA K + D ++R+ + + A++S + IER Sbjct: 1 MGHKINPKGLRLGYTQDWQSRWFA-PKNMPALIIEDKRIRELIEERFKMAAISFVGIERA 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 +R+ IHTARPG+VIGKKG D+E+LRK + + G +N+ E++ PE DA LVA SI Sbjct: 60 GAFLRINIHTARPGVVIGKKGADIEQLRKDLEKMTGSKTFVNVVEIKNPETDASLVAQSI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Q+E+R + AMK+A++ A+ A GIK+ VSGRLGGAEIARTEW REGRVPLHTL A Sbjct: 120 CMQIEKRAHYGAAMKKAIEKALAGKALGIKIMVSGRLGGAEIARTEWKREGRVPLHTLCA 179 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKG 205 +IDY T+EA T G IG KVWIFK Sbjct: 180 EIDYGTAEAMTISGKIGCKVWIFKK 204 >UniRef50_A9FGJ7 30S ribosomal protein S3 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=RS3_SORC5 Length = 230 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 107/230 (46%), Positives = 152/230 (66%), Gaps = 14/230 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK HP G R+G++K W+S W+ + + L D ++++ + + L A+++ + IER Sbjct: 1 MGQKTHPYGFRVGVIKTWSSKWYEDGAAYQKWLHQDIRIKRAIKQYLYNANIAGVEIERA 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKV--------------VADIAGVPAQINIAEV 106 A +V + TARPG+VIGK G+ +E L+ V+ I++ EV Sbjct: 61 ANRAKVIVFTARPGMVIGKGGKGIETLKSGNVGTASKGETLFPGVSSFTDNEVFIDVQEV 120 Query: 107 RKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTE 166 RK E +A+LVA++I +QLERR+ FRRAMK+AV AM+ GAKGI+V +GRLGG+E++R E Sbjct: 121 RKAETNAQLVAENIATQLERRIAFRRAMKKAVSTAMKFGAKGIRVRCAGRLGGSEMSRVE 180 Query: 167 WYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQ 216 YREGRVPLHTLRADI++ +EA T G+IGVKVW+FKGE+L A Q Sbjct: 181 TYREGRVPLHTLRADIEFGLAEARTKVGIIGVKVWMFKGEVLQRKARRIQ 230 >UniRef50_C7BEM5 30S ribosomal protein S3, chloroplastic n=2 Tax=Chlorophyta RepID=C7BEM5_PEDMN Length = 233 Score = 227 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 100/232 (43%), Positives = 135/232 (58%), Gaps = 26/232 (11%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G+RLGI + S W+A T++++ + D +R YL +A +SRI I+R Sbjct: 1 MGQKIHPLGLRLGITQNPRSYWYAPTEQYSYLVVEDSILRNYLNNTYKEAGISRINIQRK 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA------------------------- 95 I V + ARP I +GK + +E LR+ + A Sbjct: 61 LNQIYVEVLAARPAIFVGKDTKGIESLRQTLEQKALSYRHDLVQHYGSSFFNEERGTILF 120 Query: 96 -GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 + + E PE DA + D + QLE+RV FRRA+++A+Q A R KGIK++VS Sbjct: 121 QNPKVVLQVTERVNPEDDAAFLGDFVVEQLEKRVAFRRAVRQAMQRAQRARVKGIKIQVS 180 Query: 155 GRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 GRL GAEIARTEW REGRVPL TLRA+IDY+ A T YG++GVKVW+FK E Sbjct: 181 GRLNGAEIARTEWVREGRVPLQTLRANIDYSYKTARTIYGLLGVKVWVFKNE 232 >UniRef50_D2ISA0 Ribosomal protein S3 n=1 Tax=Cryptomonas paramecium RepID=D2ISA0_9CRYP Length = 217 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 91/208 (43%), Positives = 137/208 (65%), Gaps = 2/208 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG+V S+W A+ + L DF +R+Y + A +S I I R Sbjct: 1 MGQKVHPLGFRLGVVYRHRSSWVADKGNYPSYLKEDFLLRKYFSSRFLDAGISTIEIHRR 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADI--AGVPAQINIAEVRKPELDAKLVAD 118 I + ++ +RP ++ ++++++ + ++ ++++ + P+LDA L+A Sbjct: 61 LTYIDLYLYASRPNALMANSQAAIKEIKEYLRNLGANDACFRVHVLALLHPDLDAYLLAT 120 Query: 119 SITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 I+ QLE+R+ FR+ M++A++ A + GAKGIKV++SGRLGGAEI+R+EW REGRVPL TL Sbjct: 121 FISQQLEKRISFRKVMQQAIRRARKAGAKGIKVQISGRLGGAEISRSEWKREGRVPLQTL 180 Query: 179 RADIDYNTSEAHTTYGVIGVKVWIFKGE 206 ADI+Y EAHT YGV+GVKVWIF+ E Sbjct: 181 YADINYAAKEAHTNYGVLGVKVWIFRRE 208 >UniRef50_C0JWV6 30S ribosomal protein S3, chloroplastic n=1 Tax=Pycnococcus provasolii RepID=C0JWV6_9CHLO Length = 286 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 89/218 (40%), Positives = 138/218 (63%), Gaps = 14/218 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--ASVSRIVIE 58 MGQKV+P G RLG + S WFA++++++ L D VR++LT+E + +S + Sbjct: 1 MGQKVNPFGFRLGYSQHHRSDWFASSQDYSKKLQEDLLVRKFLTREFPDTESGISAVYTR 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGE---------DVEKLRKVVADIA--GVPAQINIAEVR 107 R + + + IHTARP +++G E + ++R+ + + +P + + E Sbjct: 61 RKGQLLSLEIHTARPRVLLGSNQETQDPTNRVSGLVQVRRDLEKLFPQKIPLSLRLVEET 120 Query: 108 KPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL-GAKGIKVEVSGRLGGAEIARTE 166 +P+ + L+A S+ QLE+RV FRRA+K+ ++ A G G+KV++SGRL GAEIAR+E Sbjct: 121 QPDSNVALLAASLAHQLEKRVAFRRALKQTIKRAQTARGVLGVKVQISGRLNGAEIARSE 180 Query: 167 WYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 W REGRVPLHTLRA++DY T A T YG +G+KVW++K Sbjct: 181 WVREGRVPLHTLRAEVDYATHTARTLYGCLGIKVWLYK 218 >UniRef50_Q20F10 30S ribosomal protein S3, chloroplastic n=2 Tax=Chlorophyta RepID=RR3_OLTVI Length = 235 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 92/233 (39%), Positives = 137/233 (58%), Gaps = 16/233 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLG+ + S WFA +E++ + D +R+ L K + + + I+R Sbjct: 1 MGQKVHPLGFRLGVTQKHRSQWFAKPQEYSQLVLEDHFLREELNKRFPNSGIIDLFIQRK 60 Query: 61 AKSI--RVTIHTARPGIVIGKKGEDVEKLRKVVADI--------------AGVPAQINIA 104 V I T RPG+++G+K ++ +KL+++ ++ + + Sbjct: 61 VDRTQVEVEIRTTRPGLLVGRKRQNCDKLKQLRDELQVELNKFRAKNGVSPTAKVALQVT 120 Query: 105 EVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 164 V+ +A ++A+ + +QLERR+ FRRA++R + R +G K++VSGRL GAEIAR Sbjct: 121 TVQNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDRVQGAKIQVSGRLNGAEIAR 180 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQP 217 +EW R GRVPL TLRAD+DY EA T YG++G+KVW FKGEI AVE P Sbjct: 181 SEWIRTGRVPLQTLRADVDYCHREAKTIYGILGIKVWTFKGEIKPVRKAVEVP 233 >UniRef50_P19169 30S ribosomal protein S3, chloroplastic n=1 Tax=Euglena gracilis RepID=RR3_EUGGR Length = 218 Score = 219 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 104/217 (47%), Positives = 138/217 (63%), Gaps = 13/217 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER- 59 MGQKVHP G RLGI K +S W+ + +A + D +R ++ KEL + +S I IER Sbjct: 1 MGQKVHPLGFRLGITKSHSSFWYVERRHYASFVKEDIVIRNFMNKELLETLISLIKIERI 60 Query: 60 -----PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG----VPAQI---NIAEVR 107 + V IH ARP VIG+ G+ + ++R ++ D +I + V Sbjct: 61 YEFSEQRNNTIVYIHVARPERVIGRDGQGLSRIRDILIDRMNYLLGKTPRIITCKVVGVT 120 Query: 108 KPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEW 167 P LDA+L+ADS+ +LE+R F RAMK + AM+ GA+GIKV+VSGRL G EIARTEW Sbjct: 121 SPNLDARLLADSVRRELEKRTPFIRAMKTVMLQAMKAGAEGIKVQVSGRLNGIEIARTEW 180 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 +REGRVPLHTLRADIDY AHT YGV+G+KVW++K Sbjct: 181 FREGRVPLHTLRADIDYFNDIAHTIYGVLGIKVWVYK 217 >UniRef50_C0JWQ0 30S ribosomal protein S3, chloroplastic n=1 Tax=Monomastix sp. OKE-1 RepID=C0JWQ0_MONSK Length = 235 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 24/229 (10%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFA---------NTKEFADNLDSDFKVRQYLTKELAKAS 51 MGQK+HP G+R+GI + S WFA + +A ++ D VR + + EL A Sbjct: 1 MGQKIHPLGLRIGIFQKHKSEWFAPVGSSNSNQSIPNYAAFIEQDKGVRDFFSSELRDAG 60 Query: 52 VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV-------------P 98 +S+I+I R + V +H A+P +V+G+ G ++++L + Sbjct: 61 LSKILISRRTNRLFVELHVAQPKLVLGENGNNLKQLTEKFQKNIQKLLSRHNNPSMSAPA 120 Query: 99 AQINIAEVRKPEL--DAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 I + ++ + E+ DA L+ I QLE+RV FRR MK+++Q A GA+GIK++++GR Sbjct: 121 LSIQVVQIPQEEIATDATLLGQKIAEQLEKRVAFRRVMKQSIQQARAAGAEGIKIQIAGR 180 Query: 157 LGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 L GAEIARTEW REGRVPL TL+A+IDY A T YG++G+K+WIFKG Sbjct: 181 LNGAEIARTEWAREGRVPLQTLKANIDYCYETAQTIYGILGIKIWIFKG 229 >UniRef50_P56798 30S ribosomal protein S3, chloroplastic n=103 Tax=Streptophyta RepID=RR3_ARATH Length = 218 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 82/217 (37%), Positives = 126/217 (58%), Gaps = 11/217 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--------ASV 52 MGQK++P G RLG + +S WFA K++++ L+ D K+R + + K + Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA---DIAGVPAQINIAEVRKP 109 +RI I++ I++ I+ P ++I K VE+L+ V + I I + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120 Query: 110 ELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYR 169 D ++A+ I QL+ RV FR+AMK+A++ + KGI+V+++GR+ G EIAR EW R Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 EGRVPL T+ A IDY + T YGV+G+K+WIF E Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDE 217 >UniRef50_B7J249 30S ribosomal protein S3 n=23 Tax=Bacteria RepID=RS3_BORBZ Length = 293 Score = 215 bits (548), Expect = 9e-55, Method: Composition-based stats. Identities = 103/232 (44%), Positives = 152/232 (65%), Gaps = 3/232 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELA--KASVSRIVIE 58 MGQKVHP +R+ I K W S W+ + K ++ L DF +R+ + K L K +S I I Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 59 RP-AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVA 117 R + + V I T RPG VIG KG ++EK+ +++ I I EV++PELDA+++A Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 + I Q+E R +R+ +K ++ +M GA+G+K++++GRLGGAEIAR+ +EGRVPLHT Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQR 229 LRA+IDY SEA TTYG+IGVKVW+FKGE+LG + + +P +++ Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQTNSDAGQVINKKPFRERG 232 >UniRef50_Q32RN6 30S ribosomal protein S3, chloroplastic n=32 Tax=Streptophyta RepID=RR3_ZYGCR Length = 236 Score = 209 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 89/226 (39%), Positives = 138/226 (61%), Gaps = 21/226 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--------ASV 52 MGQK+HP G RLG+ + +STWFA +++ L D ++R + + + K A + Sbjct: 1 MGQKIHPLGFRLGVTQNHHSTWFAPLNNYSELLKEDERIRNCIQQYVRKYVRSSSRSAEI 60 Query: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGED---------VEKLRKVVADIAG---VPAQ 100 +R+ I++ + V IHTA P +++ + + +E LR+ + + Sbjct: 61 ARVQIQKKTDLVEVQIHTASPSLLVQTRVPNRSTNTQEIGIEYLRRNIQNTLNPGNRKLN 120 Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG-AKGIKVEVSGRLGG 159 + +++V KP +A ++A+ I QLE RV FR+ MK+A++ A + G A+GIK++++GRL G Sbjct: 121 MTLSQVAKPYGEAIILAEYIALQLESRVAFRKTMKQAIKLANKSGNARGIKIQIAGRLNG 180 Query: 160 AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 AEIAR EW REGRVPLHTLRA IDY A T YGV+G+KVW+F+ Sbjct: 181 AEIARVEWAREGRVPLHTLRAQIDYCHYPAQTIYGVLGIKVWVFQN 226 >UniRef50_P41205 30S ribosomal protein S3 n=2 Tax=Mycoplasma RepID=RS3_MYCPN Length = 273 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 100/240 (41%), Positives = 143/240 (59%), Gaps = 10/240 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTK-EFADNLDSDFKVRQYLTKELAKASVSRIVIER 59 MGQKV+ NG+R GI K W S W AN+ + A L D K+R A VS + IER Sbjct: 1 MGQKVNSNGLRFGINKNWISRWTANSHAQTAKWLIEDEKIRNLFFVNYRNAQVSNVEIER 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN--IAEVRKPELDAKLVA 117 ++ V ++ A+P +IG + ++++K+ K + I G ++ I E+ P L A+++A Sbjct: 61 TQATVDVFVYAAQPAFLIGSENKNIQKITKQIKQIIGRTTNLDLTINEIGSPMLSARIIA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 + + +E RV R AM++++ ++ GA GIKV VSGRL GAEIAR + Y EG +PL T Sbjct: 121 RDLANAIEARVPLRTAMRQSLIKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLST 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEILGG-----MAAVEQPEKPAAQPKKQQRKGR 232 LRADIDY +A TTYGVIGVKVWI +G I A + P+K QP +Q ++ R Sbjct: 181 LRADIDYALEKAQTTYGVIGVKVWINRGMIYTKGLNRTPAHILHPQK--KQPNRQNQQPR 238 >UniRef50_B1AIM6 30S ribosomal protein S3 n=101 Tax=Bacteria RepID=RS3_UREP2 Length = 257 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 93/235 (39%), Positives = 136/235 (57%), Gaps = 3/235 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWF-ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER 59 MGQKV+PNG+R GI K W S W + + A L D K+R+YL+ + A + + IER Sbjct: 1 MGQKVNPNGLRFGINKQWLSRWVPTDQLQMAKWLVEDDKIRKYLSTKYKNAGIDHVEIER 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP--AQINIAEVRKPELDAKLVA 117 + + V ++ + G++IG + + + + + I G + + EV+ PEL A L+A Sbjct: 61 DQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVGRKQLVSLKVVEVQIPELQASLMA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 I +E RV FR A K ++ ++ GA+GIK VSGRLGG E+AR E Y +G + LHT Sbjct: 121 REIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVSGRLGGVEMAREEGYTQGVMTLHT 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGR 232 LRADIDY+ EAHTTYG+IGVKVWI +GE+ G + + + + Sbjct: 181 LRADIDYSMQEAHTTYGIIGVKVWINRGELFGNKLVNSVAHAANKEFSRSSKPKK 235 >UniRef50_B3CT11 30S ribosomal protein S3 n=2 Tax=Orientia tsutsugamushi RepID=RS3_ORITI Length = 219 Score = 207 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 100/210 (47%), Positives = 143/210 (68%), Gaps = 3/210 (1%) Query: 1 MGQKVHPNGIRLGIV--KPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIE 58 MGQKV+P R G + W S +AN ++D L K+R+ + E + A +++I+IE Sbjct: 1 MGQKVNPCIFRTGPNLPRNWESVLYANKNNYSDFLLKILKIRKIINTEYSFAQITKILIE 60 Query: 59 R-PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVA 117 +K+I V I+ + G++IGK G D+EKL++ +A I INI EV+KPEL+ +A Sbjct: 61 WPSSKNIVVNIYAKKIGVIIGKSGGDIEKLKQNIAKITSADVSINICEVKKPELEEAFIA 120 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 +I QLERR F++ MK+A+ +M+ GAKGIK+ SGRLGG EIAR+E Y+EGRVPL T Sbjct: 121 QTIAQQLERRQSFKKVMKKAIHASMKQGAKGIKIICSGRLGGVEIARSESYKEGRVPLQT 180 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKGEI 207 +RADI Y +EA TTYGVIGVKVW+++ ++ Sbjct: 181 IRADIRYAFAEAITTYGVIGVKVWVYRCDV 210 >UniRef50_Q8M9V0 30S ribosomal protein S3, chloroplastic n=1 Tax=Chaetosphaeridium globosum RepID=RR3_CHAGL Length = 255 Score = 202 bits (515), Expect = 6e-51, Method: Composition-based stats. Identities = 101/252 (40%), Positives = 141/252 (55%), Gaps = 46/252 (18%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK----------- 49 MGQKV+P G RLG+ + +S WFA K+FA L+ D K+R Y+ + + K Sbjct: 1 MGQKVNPLGFRLGVTQEHHSYWFATNKQFAGFLEEDQKIRHYIYQYVQKHIRESSNTSYG 60 Query: 50 -ASVSRIVIERPAKSIRVTIHTARPGIVIGKK---------------------------- 80 + VS+I I+R + I V IHT+ ++ K Sbjct: 61 YSGVSKIEIKRDTELIHVEIHTSGFPALLIKGQIKEKNRDKNKSNKNSALDQSVNKNQNK 120 Query: 81 --GEDVEKLRKVVADIA---GVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMK 135 G+++EK+ + V ++ +++V P +A +VA+ I QLE RV FRRAMK Sbjct: 121 NTGQELEKMWRYVQRSLTLSNGKFRMTLSKVSNPYKEANIVAEYIARQLENRVAFRRAMK 180 Query: 136 RAVQNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 +A+++A G KGIK+++SGRL GAEIAR EW REGRVPL TLRA IDY A T YG Sbjct: 181 QAIKDAKENGQVKGIKIQISGRLNGAEIARVEWAREGRVPLQTLRAKIDYCHYPAQTKYG 240 Query: 195 VIGVKVWIFKGE 206 V+G+KVWIF+GE Sbjct: 241 VLGIKVWIFQGE 252 >UniRef50_P56365 30S ribosomal protein S3, chloroplastic n=3 Tax=Chlorophyta RepID=RR3_CHLVU Length = 231 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 86/231 (37%), Positives = 139/231 (60%), Gaps = 16/231 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER- 59 MGQKVHP G RLGI + S W ++ A + +R ++ K+ A ++ I I+R Sbjct: 1 MGQKVHPIGFRLGITQKHRSYWCTTPQKSALWIQDASFLRNFIKKKYIGAGITHIEIQRQ 60 Query: 60 --PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV-------------PAQINIA 104 + S+ + I+ AR + G + +E+L++ + + ++++ Sbjct: 61 DVDSPSLGIQIYAARLRQIAGNDSKGLERLQEELVKQLQIFYRKRNLVEPGTIHLRLSVK 120 Query: 105 EVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 164 +R PE A+++A+ + +LE+R FRRAM++ VQ A+R G KGIKV++SGRL GA+IAR Sbjct: 121 PLRAPEAYAEVLAEKLVEELEQRKPFRRAMRQTVQRALRAGVKGIKVQISGRLNGADIAR 180 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVE 215 +E REG VPL TLRADIDY++ A T +G++G+K+W+F+GE L ++ V Sbjct: 181 SEDVREGPVPLQTLRADIDYSSKPAKTIFGLLGIKIWVFRGERLTRISNVR 231 >UniRef50_Q601K8 30S ribosomal protein S3 n=6 Tax=Mycoplasma RepID=RS3_MYCH2 Length = 227 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 133/212 (62%), Gaps = 4/212 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+PNG R GI + N+ W+A+ +F+ NL D K+ ++ K + + VI R Sbjct: 1 MGQKVNPNGFRFGITRNHNAIWYADKNKFSINLLEDVKIHRFFEKLTREYQIGNTVIRRD 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIA-GVPAQINI--AEVRKPELDAKLV 116 + I V ++TA+ G +G GE+++K+ + + IN+ +++ PEL+AKL+ Sbjct: 61 RNNAITVLVYTAKLGSFLGASGENLKKIVEKLRKTLKNRKIVINVDAVDIQSPELNAKLM 120 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 A+ I +LE+R +R A K A++ A++ GA G+K V GRL G E+AR E Y EG + LH Sbjct: 121 AELIAEKLEQRKSYRIAQKFAIRTALKNGATGVKTIVCGRLNGVEMARCEGYAEGEMKLH 180 Query: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 TLR +++Y T+ A TTYG++GVKVW+ GEI Sbjct: 181 TLRQNVEYATAIAKTTYGILGVKVWVSLGEIK 212 >UniRef50_D0EVS4 30S ribosomal protein S3, chloroplastic n=1 Tax=Bryopsis hypnoides RepID=D0EVS4_9CHLO Length = 243 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 82/238 (34%), Positives = 121/238 (50%), Gaps = 33/238 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G RLG + + WFA + + + D +R + + A + +I I R Sbjct: 1 MGQKIHPYGFRLGNFQKHQANWFAKKENYTQKIFEDLFIRDFFFQRFRDAGILKISINRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDV--------------------------------EKL 87 + I++ I +PG I K + + Sbjct: 61 FNNHIQICIFLTKPGFFISSKNAQLTTIQKTLETAFLKYQSSNFFRLNFLKQSSLSKNNI 120 Query: 88 RKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK 147 + ++ I + E+ K E A +AD + QLE+R+ FRRA+K+ ++ + R + Sbjct: 121 KSILEHQNTPKLTIQLMELVKIEQKAAFLADFLIEQLEKRIAFRRAVKKTLKRSERSKIQ 180 Query: 148 GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 GIK+++SGRL GAEIARTEW REGRVPL TLRA+IDY A T YG++GVKVW+F Sbjct: 181 GIKIQISGRLNGAEIARTEWIREGRVPLQTLRANIDYTYKTAKTIYGILGVKVWVFLD 238 >UniRef50_D1J746 30S ribosomal protein S3, chloroplastic n=2 Tax=Phaeophyceae RepID=D1J746_ECTSI Length = 222 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 86/222 (38%), Positives = 135/222 (60%), Gaps = 9/222 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT-----KELAKASVSRI 55 MG K HP G RLGIV+ S W++ + + L D+++R+Y+ ++ + ++++ Sbjct: 1 MGHKTHPLGFRLGIVQEDKSLWYSGSNSYVSFLKEDYQIREYIYQFLLLNKVGYSGITKL 60 Query: 56 VIER--PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA-GVPAQINIAEVRKPELD 112 +I+R K I + I + PG ++GK G + KL + ++ + INI E+ KP + Sbjct: 61 IIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRKLDEELSVLLKNKKVLINIVEITKPYTE 120 Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAM-RLGAKGIKVEVSGRLGGAEIARTEWYREG 171 A ++ D + +LE RV FR ++ ++ KGIK++++GRL GAEIARTEW REG Sbjct: 121 ATILVDLLVKKLEERVSFRMCIREILKRYRTEDELKGIKIQIAGRLNGAEIARTEWVREG 180 Query: 172 RVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAA 213 RVPL TLRA+IDY+ A TTYG++G+K+W+FK EIL Sbjct: 181 RVPLQTLRANIDYSYKTAQTTYGILGIKIWLFKNEILTKKII 222 >UniRef50_P0C485 30S ribosomal protein S3, chloroplastic n=72 Tax=Spermatophyta RepID=RR3_ORYSJ Length = 239 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 80/238 (33%), Positives = 123/238 (51%), Gaps = 32/238 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS--------- 51 MGQK++P G RLG + +S WFA K +++ L D K+R + + K Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VSRIVIERPAKSIRVTIHTARPGIVIGKKG-EDVEKLR 88 ++ I I++ +I V IH P ++ K E++EK Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKG 148 + + I I +V++P ++A+ I QL+ RV FR+AMK+A++ + KG Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180 Query: 149 IKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 +KV+++GRL G EIAR E ++GR+PL T+RA IDY T YGV+GVK+WIF E Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDE 238 >UniRef50_B7T3V4 30S ribosomal protein S3, chloroplastic n=1 Tax=Monsonia speciosa RepID=B7T3V4_9ROSI Length = 266 Score = 185 bits (471), Expect = 8e-46, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 55/258 (21%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELA-------KASVS 53 MGQK++P G RLG + +S WF K + ++L D K+R + + K ++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSVWFEKPKNYCESLKEDKKIRDRIKNYIDNRRSGPMKDLIT 60 Query: 54 RIVIERPAKSIRVTIHTARPGIVIGKKG--------------------EDVEKLR----- 88 RI IE+ I+V I+ + +G K +++LR Sbjct: 61 RIQIEKGMDLIKVIIYMGFQELFMGDKPAKTKKGKRKRGQKGKKEGEPRHIKELRVRELK 120 Query: 89 -----------------------KVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE 125 K ++ ++ I + P D ++A+ + QL+ Sbjct: 121 VNVAKALHLNLSGNRGLKKLNVEKGLSQSGNRQLKVVIRNISNPYGDPNILAEFLADQLK 180 Query: 126 RRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYN 185 R+ FR+AMKR ++ A KG+KV+++GRLGG +IAR E +GRVPLHT+RA ID+ Sbjct: 181 NRISFRKAMKRVIELAKEANTKGVKVQIAGRLGGRDIARVECLLQGRVPLHTIRAKIDFC 240 Query: 186 TSEAHTTYGVIGVKVWIF 203 ++ YGV+G+K+WIF Sbjct: 241 STRVQMLYGVLGIKIWIF 258 >UniRef50_Q46GA1 30S ribosomal protein S3P n=8 Tax=Euryarchaeota RepID=RS3_METBF Length = 311 Score = 185 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A ++F ++ + +Y ++L +A + + R ++ I++ +PG+VIGK G+ Sbjct: 1 MAIERKFVNDGFVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGK 60 Query: 83 DVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 + KL + VA + QI+ EV+KPEL+A+++A + + +ER FR+A ++ Sbjct: 61 VIRKLTRDVAARYNLENPQIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAV 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 M GA G +V +SG+L GA +R E + +G + D +D + A G +G K Sbjct: 121 MNAGALGCEVVISGKLTGA-RSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCK 179 Query: 200 VWIFKGE-ILGGMAAVEQPEKPAAQPKKQQRKG 231 V I + +L +P +P +P ++ + Sbjct: 180 VRIIQPGVVLPDSYTTTEPSEPVTEPVEKPAEK 212 >UniRef50_D2LQE8 Ribosomal protein S3 n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQE8_9EURY Length = 237 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 4/207 (1%) Query: 25 NTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDV 84 + ++F + +++YL KE A A + I+R R+ + RPG+VIG+KG + Sbjct: 2 DERKFVKENVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIILEVERPGMVIGRKGAKI 61 Query: 85 EKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR 143 ++L + GV I + E P L+A+++A + LER FRRA ++ M Sbjct: 62 KELTDKLQQDFGVENPTIEVKESPNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIME 121 Query: 144 LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD-IDYNTSEAHTTYGVIGVKVWI 202 GAKG ++ +SG+L G + ARTE + +G + + + + + A T G+IGV V I Sbjct: 122 AGAKGAQIIISGKLTG-DRARTEKFMDGTIKYNGKPVELVRMGYATAKTKPGIIGVTVKI 180 Query: 203 FKGE-ILGGMAAVEQPEKPAAQPKKQQ 228 + L + P + + + Sbjct: 181 MPPDAKLPDEVNILPPVEAEEEKVNED 207 >UniRef50_Q2WGE8 30S ribosomal protein S3, chloroplastic (Fragment) n=2 Tax=Selaginella RepID=Q2WGE8_SELUN Length = 225 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 102/223 (45%), Gaps = 19/223 (8%) Query: 2 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK------------ 49 G+K +P G RLGI K + W A + ++ + D +VR + Sbjct: 2 GRKTNPLGSRLGIAKNHHPNWSARPRIYSQYVQEDKQVRDCTDAYVHGQRVWNPAGSGGN 61 Query: 50 ---ASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG----VPAQIN 102 + R+VI R V H P ++I G +E+ R V I Sbjct: 62 SGAEGIERVVIRRKTDLPSVETHAGPPAVLIRSHGRGIEQSRMNVQQNLSDSRIGRVHIA 121 Query: 103 IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEI 162 AE P + A + SQ RV FRR K+A++ A + G KGIK +++GR GAEI Sbjct: 122 SAETSGPYGEPNTPAKYMASQPGNRVAFRRTTKKAIEPARKSGRKGIKTQIAGRPNGAEI 181 Query: 163 ARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 AR EW REGRVP T RA IDY A T YGV G KV I + Sbjct: 182 ARVEWAREGRVPPQTSRAQIDYRYYPAQTVYGVSGTKVRILRN 224 >UniRef50_A0B9W4 30S ribosomal protein S3P n=3 Tax=Archaea RepID=RS3_METTP Length = 276 Score = 176 bits (446), Expect = 5e-43, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 5/196 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A K+F + V +YL KEL +A +V+ R ++T++ +PG+VIGK G+ Sbjct: 1 MAVEKKFVQEGFTKALVDEYLAKELDRAGYGGMVMNRTPMGTQITVYAEKPGMVIGKGGK 60 Query: 83 DVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 + KL + + + QI++ +V K +L+A++VA+ + S LE FR+A + ++ Sbjct: 61 LIRKLTRDLERRFRLDNPQIDVQDVGKSDLNARVVANRLASSLEHGWYFRKAGQSMLRRV 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 M GA G ++ +SG+L G +R E + G + A+ +D + A G IG + Sbjct: 121 MDSGALGCEIVISGKLTG-PRSRVEKFLAGYIKHSGKPAEEIVDTGYAVAVKKLGAIGCQ 179 Query: 200 VWIFKGE-ILGGMAAV 214 V I +L + Sbjct: 180 VRIVPPGAVLPDDFQI 195 >UniRef50_A7I5P5 30S ribosomal protein S3P n=2 Tax=Methanomicrobiales RepID=RS3_METB6 Length = 231 Score = 176 bits (446), Expect = 5e-43, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 5/207 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A ++F +V +YLTKEL +A + I R +VTI +PGIVIGK G+ Sbjct: 1 MAVERKFIAEGARKARVEKYLTKELKRAGFGGMDIARTPLGTQVTIFAEKPGIVIGKGGK 60 Query: 83 DVEKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 V +L + +A GV QI + +V+ P +A+++A+ + + LER FR+A ++ Sbjct: 61 LVHQLTQDLAQNYGVESPQIEVQQVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRV 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 M GA G +V ++G+L GA ART+ + EG + ++ ++ + A GVIGV+ Sbjct: 121 MDSGALGCEVVIAGKLTGA-RARTQKFTEGYIKHCGEPSNTIVEKGYAIAIKKLGVIGVQ 179 Query: 200 VWIFKGE-ILGGMAAVEQPEKPAAQPK 225 V I + + A+ + EK PK Sbjct: 180 VKIVPADAKMPDHFAIIEQEKKLPAPK 206 >UniRef50_C7NV53 Ribosomal protein S3 n=7 Tax=Archaea RepID=C7NV53_HALUD Length = 326 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 5/196 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A+ +F + ++ ++ EL +A + + + ++ + +PG+VIGK G+ Sbjct: 1 MADELQFIQDGIQRTQIDEFFEDELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60 Query: 83 DVEKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 ++ K+ + + G+ Q+++ EV +P+L+A++VAD + + LER FR+A + Sbjct: 61 NIRKITTTLEEEFGLEDPQVDVQEVEEPDLNARIVADRLANALERGWYFRKAGHTTIDRI 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 M GAKG ++ +SG++ GA +R E + G + + A+ +D+ A G IGV Sbjct: 121 MESGAKGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGVD 179 Query: 200 VWIFKGEI-LGGMAAV 214 V I L + Sbjct: 180 VKIIPPNAELPDDFEI 195 >UniRef50_Q18GF5 30S ribosomal protein S3P n=7 Tax=Euryarchaeota RepID=RS3_HALWD Length = 323 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 7/213 (3%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A+ +F +N ++ ++ EL +A + + + ++ + +PG+VIGK G+ Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60 Query: 83 DVEKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 ++ K+ + + D + QI++ EV +P+L+A++VAD + + LER FR+A + Sbjct: 61 NIRKVTRELEDRFNLDDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRI 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 + GA G ++ +SG++ GA +R E + G + + A +D A G IGV Sbjct: 121 IESGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVT 179 Query: 200 VWIFKGEI-LGGMAAV--EQPEKPAAQPKKQQR 229 V I L + + +P Q + Sbjct: 180 VKIIPPGAELPDDFEIHDDVDVEPVEQVAESDG 212 >UniRef50_C0QW02 30S ribosomal protein S3 n=3 Tax=Brachyspira RepID=C0QW02_BRAHW Length = 202 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 93/185 (50%), Positives = 116/185 (62%) Query: 44 TKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINI 103 KE ++S I I R I + I TAR G+VIG KG+ VE ++ V + P +I Sbjct: 18 KKESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKPVHFSI 77 Query: 104 AEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIA 163 E+R ELDA L A S+ QLE RV FRRAMK + AM+ GAKGIKV SGRL GA+IA Sbjct: 78 TEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIA 137 Query: 164 RTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQ 223 RTE Y+ G VPLHTLRA+IDY T+EA TT+G+IG+KVWI+KGEIL + Sbjct: 138 RTEQYKNGSVPLHTLRANIDYGTAEALTTFGIIGIKVWIYKGEILDKKEHKQDDAGKVIS 197 Query: 224 PKKQQ 228 K + Sbjct: 198 AKGDR 202 >UniRef50_O26116 30S ribosomal protein S3P n=6 Tax=Euryarchaeota RepID=RS3_METTH Length = 258 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 5/210 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 K+F ++ +YL KEL +A + ++ V ++ RPG+VIG+ G+ V Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 + + + + + Q+ + EV PEL+ K++A I + L+R + FRR ++ M Sbjct: 63 AITQKLKNKFDLENPQVEVKEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIMAA 122 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVKVWI 202 GA+G++V +SG++ GA + T + +G + + + + GV+GV V I Sbjct: 123 GAQGVEVTISGKIRGA-RSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVRI 181 Query: 203 FKGE-ILGGMAAVEQPEKPAAQPKKQQRKG 231 + +L +E P ++ Sbjct: 182 MPPDVVLPDKVEIEDPRVTETPAEEASEAS 211 >UniRef50_B7T425 30S ribosomal protein S3, chloroplastic n=4 Tax=Magnoliophyta RepID=B7T425_9ROSI Length = 243 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 31/234 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK---------ELAKAS 51 M +K++P G RLG + +S WF K + L D ++R + E K Sbjct: 1 MARKINPLGFRLGTNQNHHSVWFEQPKNYCKGLQEDKRIRDCIKNFIDNRRKKSEPMKNL 60 Query: 52 VSRIVIERPAKS----IRVTIHTARPGIV------IGKKGEDVEKLRKVVAD-------- 93 ++RI IE+ K V I + GKK +++ +++ Sbjct: 61 ITRIQIEKSIKKQIHLTTVIIFMGFQELFEEKPKKRGKKEDELRHIKEFSELKVNVEKAL 120 Query: 94 ----IAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGI 149 ++ I+++ P D ++A+ + L+ R+ FR+AM+R ++ + + KG+ Sbjct: 121 DPNLRRNRELKVVISKIFNPFGDPNILAELLAHLLKTRIPFRKAMRRVIELSKKADIKGV 180 Query: 150 KVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 KV+++GR+ G +IAR E +GRVPLHT+RA ID+ ++ +GV+G+K+WIF Sbjct: 181 KVQIAGRIDGRDIARVECLLQGRVPLHTIRAKIDFCSTRVQMRFGVLGIKIWIF 234 >UniRef50_B2Y1Z8 30S ribosomal protein S3, chloroplastic n=1 Tax=Welwitschia mirabilis RepID=B2Y1Z8_WELMI Length = 214 Score = 169 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 117/214 (54%), Gaps = 9/214 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA------SVSR 54 MG KV+P G RLGI + +S WF + + D K+ + + + ++R Sbjct: 1 MGHKVNPLGFRLGITQKNHSVWFVKKRLYPKIFQEDVKIHKSIENYFQRHQQNSYLGIAR 60 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIA--EVRKPELD 112 I IER I V I T + +KG+ + L+ + G ++N+ ++KP + Sbjct: 61 IEIERKVDLINVIIFTGFSSFLNKEKGK-ISSLKNEIRQNLGTKKKLNVKTEILKKPYQN 119 Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGR 172 AK++ + I SQLE+RV ++ +++AV+ A + +GI++ ++GRLGG E R + GR Sbjct: 120 AKILVEFIASQLEKRVAVKKILQKAVELAQKEDIEGIRIRIAGRLGGRERTRKTKKKIGR 179 Query: 173 VPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 V L TLRA+++Y + T +G +G+++WIF E Sbjct: 180 VTLQTLRAEMNYCSYTVRTIHGTLGIQLWIFMKE 213 >UniRef50_Q06J59 30S ribosomal protein S3, chloroplastic n=1 Tax=Bigelowiella natans RepID=RR3_BIGNA Length = 246 Score = 167 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 116/244 (47%), Gaps = 39/244 (15%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKE-------------L 47 MGQKVHP G R+G+ + S WF K+++ L D+ +R+ + L Sbjct: 1 MGQKVHPLGFRVGLNGNYKSKWFVKPKDYSLLLFQDYLIRKNIFNYFNILNNSKNKKNLL 60 Query: 48 AKASVSRIVIERPAKSIRVTIHTARPGIVIGK-------------KGEDVEKLRKVVAD- 93 +++ I I R + + I+ A VI + V++L++V+ Sbjct: 61 DSINITDIKINRKFDQVYIDIYVASMNKVIFNTSGSNSDPLIKIQSNKIVDQLQRVLLKQ 120 Query: 94 -----------IAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 +NI E +A +A + LE RV FRRA+K + Sbjct: 121 VSSFNLGNKKVNNSSKIIVNIIESPDINTNAVFIAKCLIDDLENRVPFRRALKTILDTTQ 180 Query: 143 R-LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW 201 + G+K+++SGRL G E+AR+EW REGR+PL TL A+I Y A T YG++GVKVW Sbjct: 181 KQKNLAGVKIQISGRLNGIEMARSEWVREGRIPLQTLTANIGYYNDVAETKYGLLGVKVW 240 Query: 202 IFKG 205 ++K Sbjct: 241 VYKN 244 >UniRef50_P23396 40S ribosomal protein S3 n=252 Tax=root RepID=RS3_HUMAN Length = 243 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 9/205 (4%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + ++F + ++ ++LT+ELA+ S + + + I R V+G+KG Sbjct: 6 SKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRR 65 Query: 84 VEKLRKVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 + +L VV G P ++ +V L A A+S+ +L + RRA ++ Sbjct: 66 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGV 198 M GAKG +V VSG+L G + A++ + +G + + +D GV+G+ Sbjct: 126 IMESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184 Query: 199 KVWIFKGEILGGMAAVEQPEKPAAQ 223 KV I + P+KP Sbjct: 185 KVKIM---LPWDPTGKIGPKKPLPD 206 >UniRef50_O28360 30S ribosomal protein S3P n=3 Tax=Euryarchaeota RepID=RS3_ARCFU Length = 229 Score = 166 bits (420), Expect = 7e-40, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 4/196 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A ++F V++++ E+ A + I R +VT+ RPG+VIGK G Sbjct: 1 MAVERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGR 60 Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 ++ L + + D Q+++ EV KPE +A+L+A + LER FRRA R + M Sbjct: 61 RIKALTEKLKDFGIENPQVSVDEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIM 120 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKV 200 GAKG ++E+SG+L +E ARTE + G + A+ + A GV+GV V Sbjct: 121 EAGAKGCEIEISGKLV-SERARTEKFVAGTIVHTGDPAESMVQKGFDIAIKKLGVLGVSV 179 Query: 201 WIFKGEI-LGGMAAVE 215 I ++ L V+ Sbjct: 180 RIIPPDVTLPDEFEVK 195 >UniRef50_B3V6P6 Ribosomal protein S3 n=1 Tax=uncultured marine group II euryarchaeote KM3-130-D10 RepID=B3V6P6_9EURY Length = 367 Score = 165 bits (419), Expect = 8e-40, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 4/205 (1%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 + F VR+YL +E +A + R + +VT+ + G VIG++G+ + + Sbjct: 8 RAFIHRNVERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHE 67 Query: 87 LRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 L++ + + + +++ EV + L A+++A + S LER FRRA QN M G Sbjct: 68 LQRRLQNDFILENPHLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMDAG 127 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVKVWIF 203 A+G V +SG++ G R E +++G + A +D S A G IG V I Sbjct: 128 ARGCLVILSGKITG-PRHRVEKFQQGHIKFCGETALEFMDTGFSTAVKKLGTIGCTVRIM 186 Query: 204 KGEILGGMAAVEQPEKPAAQPKKQQ 228 + + + P + Sbjct: 187 RPGVKLPHEITITERVDSGLPPLAE 211 >UniRef50_B7ZIJ3 30S ribosomal protein S3, chloroplastic n=1 Tax=Ephedra equisetina RepID=B7ZIJ3_EPHEU Length = 215 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 8/214 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA------SVSR 54 MG KV+P G RLG+ + NS WFA +E+ L D K+ + + + + R Sbjct: 1 MGHKVNPMGFRLGLTQNHNSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGR 60 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGE--DVEKLRKVVADIAGVPAQINIAEVRKPELD 112 I I+R I + I+ P +K E V+ K + IN + KP Sbjct: 61 IEIQRKIDLINIIIYIGFPIFFKNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQK 120 Query: 113 AKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGR 172 ++A+ I QLE+RV ++ +++AV+ A + +GI++ ++GRLGG E R + GR Sbjct: 121 TNILAEYIALQLEKRVAVKKILQKAVELAKKDEIEGIRIRIAGRLGGRERTRKTKIKLGR 180 Query: 173 VPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 V L TLRA++DY++ T +G +G+++WIF E Sbjct: 181 VTLQTLRAEMDYSSFTVRTIHGALGIQLWIFMKE 214 >UniRef50_C5A280 30S ribosomal protein S3P n=8 Tax=Thermococcaceae RepID=RS3_THEGJ Length = 209 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 4/192 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 A + F + + +YL KEL +A I I++ +V I A PG VIG+ G Sbjct: 1 MAIERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGR 60 Query: 83 DVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 + +L +++ G+ QI + E++ P L+AK+ A + LER + FRRA A++ Sbjct: 61 RIRELTRILERQFGLENPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAI 120 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 MR GA+G+++ +SG+L G E A++ + +G + A+ + ++A GVIGVK Sbjct: 121 MRNGARGVEIRLSGKLTG-ERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVK 179 Query: 200 VWIFKGEILGGM 211 V I + Sbjct: 180 VAIMPPDARLPD 191 >UniRef50_P58133 Plastid 30S ribosomal protein S3 n=1 Tax=Euglena longa RepID=RR3_ASTLO Length = 219 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 15/219 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK +PNG+R G K S W+ K ++ + D +R++L +++ +S I IE+ Sbjct: 1 MGQKTNPNGLRFGKFKKHFSCWYTENKNYSHFVKQDIFIRKFLMEKIKNVFISLIEIEKD 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEK---------------LRKVVADIAGVPAQINIAE 105 K + IH + + I I + E Sbjct: 61 NKETVIFIHYLNFSKFNKVETNSEKNEINLFKLKNLLLKSLNSFFNVKINFNEFIIKLIE 120 Query: 106 VRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIART 165 + P LD + +A+ I +LE+R+ FR+ + + N + G KGIK+++SGRL AE+AR Sbjct: 121 IENPILDVRFIANDIRYKLEKRMNFRKIVNSTIANIINKGIKGIKIKLSGRLNDAEMARE 180 Query: 166 EWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 E +REG+VPL+TL+A+IDY A T G +G+KVW+ K Sbjct: 181 ESFREGKVPLNTLKANIDYFHCTAKTLSGSLGIKVWLNK 219 >UniRef50_A4FWB6 30S ribosomal protein S3P n=11 Tax=Methanococcales RepID=RS3_METM5 Length = 211 Score = 162 bits (411), Expect = 7e-39, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 5/197 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 + F S+ + +Y +L +A S I +++ R+T+ +PG VIG+KG+ V+ Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62 Query: 86 KLRKVVADIAG-VPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 +L + +A QI + +V P+LD +V I S LER + FRR A++ M Sbjct: 63 ELTETLAKEYAVKNPQIEVKQVENPDLDPAIVGHKIASSLERGMHFRRTAHSAIRRVMGS 122 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 GAKG+ + VSG+L G E +RTE + +G + A+ ++ + A GV+GV V I Sbjct: 123 GAKGVSIIVSGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKI 181 Query: 203 FKGEI-LGGMAAVEQPE 218 K ++ L + E Sbjct: 182 MKPDVTLPDEITILSGE 198 >UniRef50_P48153 40S ribosomal protein S3 n=10 Tax=Eukaryota RepID=RS3_MANSE Length = 243 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 9/205 (4%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + ++F + ++ ++LT+ELA+ S + + + I R V+G+KG Sbjct: 7 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRR 66 Query: 84 VEKLRKVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 + +L VV +P ++ +V L A A+S+ +L + RRA ++ Sbjct: 67 IRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRF 126 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL--RADIDYNTSEAHTTYGVIGV 198 M GA+G +V VSG+L G + A++ + +G + ++ T GV+G+ Sbjct: 127 IMESGARGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 185 Query: 199 KVWIFKGEILGGMAAVEQPEKPAAQ 223 KV I + P+KP Sbjct: 186 KVKIM---LPWDQQGKNGPKKPQPD 207 >UniRef50_UPI0001B44297 30S ribosomal protein S3 n=1 Tax=Listeria monocytogenes FSL F2-515 RepID=UPI0001B44297 Length = 194 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 77/147 (52%), Positives = 107/147 (72%), Gaps = 1/147 (0%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G+R+G+++ W+S W+A K++AD L D ++R Y+ K L+ ASVSR+ IER Sbjct: 1 MGQKVHPIGMRIGVIRDWDSKWYA-EKDYADFLHEDLRIRDYVAKRLSDASVSRVEIERA 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 A + +TIHTA+PG+VIGK G +VE LRK + ++ INI E+++ +LDAKLVA++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTKKRVHINIVEIKRADLDAKLVAENI 119 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAK 147 QLE RV FRRA K+A+Q MR G K Sbjct: 120 ARQLEGRVSFRRAQKQAIQRTMRAGQK 146 >UniRef50_Q673S3 Ribosomal protein S3 n=4 Tax=environmental samples RepID=Q673S3_9EURY Length = 307 Score = 159 bits (402), Expect = 8e-38, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 5/205 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 + F + VR+YL +E +A + R + +VT+ + G VIG++G+ + + Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68 Query: 87 LRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 L+ + + ++ + E+ +P L+A+++A + S LER FRRA QN M G Sbjct: 69 LQYRLKSDFKLENPRLEVNEIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAG 128 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVKVWIF 203 A+G + +SG++ G R + +++G + A +D S A G +G V I Sbjct: 129 ARGCLIILSGKISG-PRHRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLGTVGCTVRIM 187 Query: 204 KGEILGGMAA-VEQPEKPAAQPKKQ 227 + + + + P ++ Sbjct: 188 RPGVKLPHEIDIIERVDSGLAPIEE 212 >UniRef50_C6UN14 Putative 30S ribosomal subunit protein S3 n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN14_HODCD Length = 226 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 13/230 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG K +P G+RL + W FA +++A+ + + KV+ YL + I++ Sbjct: 1 MGNKTNPIGVRLVVRGHWEDAVFARGRDYAEAVYLNHKVKAYLATRYRACGMISSAIKQE 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + V I+T G+ +++ + A +++ + +A + Sbjct: 61 GNAYVVVINTDDVDAFFASAGQSADEMADALKLWFWPDASLSVRRLDDAASHPVNIAFKL 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 + + ++K+ + + GIK +GR+ G +IA+T W+ EGR+PLHTL A Sbjct: 121 MDDVATNSTVKASVKQMAKALVGTSVAGIKASYAGRIYGGDIAQTVWHIEGRIPLHTLAA 180 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 D+ Y + T YGV VKVW+ + P+AQP + Q Sbjct: 181 DVRYASVSTKTNYGVCNVKVWVCAND-------------PSAQPLEAQEA 217 >UniRef50_Q9YF78 30S ribosomal protein S3P n=1 Tax=Aeropyrum pernix RepID=RS3_AERPE Length = 246 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 4/196 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K F + K+ ++L + +A SR+ + + + +TI RP ++IG++G + + Sbjct: 7 KHFLNQGLLRTKIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIGRRGATIRR 66 Query: 87 LRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 L++V + G+ +I + + P LDA++ A I +ER + FRR A+ M G Sbjct: 67 LQEVFQTVFGLPNPRIRVEQPENPMLDARVQAFRIARSIERGIHFRRVAFAAINRIMSNG 126 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWIF 203 A G+++ +SG+L +E AR E ++ G+V + D +D ++ A GVIGV V I Sbjct: 127 ALGVEITISGKLT-SERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKGVIGVDVIIV 185 Query: 204 KGEILGGMAAVEQPEK 219 K G ++ E+ Sbjct: 186 KPGKPGDHVRIKSEEE 201 >UniRef50_A2BMC5 30S ribosomal protein S3P n=10 Tax=Thermoprotei RepID=RS3_HYPBU Length = 247 Score = 155 bits (393), Expect = 9e-37, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 4/197 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 + F ++ +YL K +A + + I + RV I+ RP ++IG++GE + Sbjct: 5 KRYFIKKAMVQTQIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIR 64 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 +L + G+ QI + V P+L+A++VA I LER +RR + + Sbjct: 65 QLAAIFEHEFGLSNPQITVRRVENPDLNARVVASRIAVLLERGAYYRRVANVMARRVLNA 124 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVP--LHTLRADIDYNTSEAHTTYGVIGVKVWI 202 GA G+++ +SG+L E AR E R G+V H + +D GV+G++V I Sbjct: 125 GAIGVQIVISGKLR-TERARYEKVRRGKVYTTGHQVEYMVDRAVMHVTLKPGVLGIEVMI 183 Query: 203 FKGEILGGMAAVEQPEK 219 K ++QPE+ Sbjct: 184 VKPAKPSDYVRIKQPEE 200 >UniRef50_A3DNB3 30S ribosomal protein S3P n=2 Tax=Desulfurococcaceae RepID=RS3_STAMF Length = 224 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 4/199 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 F D + ++L A + + + + RV I+ PG +IG+ G + Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 KL ++ G+ I ++ V P+L+A++VA I LE+ + +RR ++ M Sbjct: 67 KLMTIMQTHFGLENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEA 126 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 GA G ++ +SG+L +E AR E + GR+ D +D +A GV GV+V I Sbjct: 127 GAVGAEIIISGKLR-SERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVI 185 Query: 203 FKGEILGGMAAVEQPEKPA 221 + + + KP Sbjct: 186 VRPHLKPPDYVEIKSVKPE 204 >UniRef50_A1RXG6 30S ribosomal protein S3P n=1 Tax=Thermofilum pendens Hrk 5 RepID=RS3_THEPD Length = 202 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 4/193 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 ++ + +YL ++L +A+ + +V ++ PG+VIG+KG +++ Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65 Query: 87 LRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 + +V+ G+ QI++ EV +L+AK++A + L R V FRRA A+ M G Sbjct: 66 IAEVLEREFGIENPQIDVVEVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAG 125 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWIF 203 A+G ++ +SG+L ++ RTE + G VP + +D G+ GVKV I Sbjct: 126 ARGAEIVISGKLT-SQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIM 184 Query: 204 KGEILGGMAAVEQ 216 K + ++ Sbjct: 185 KPAKMPDTILIKG 197 >UniRef50_B3V6F1 Ribosomal protein S3 n=2 Tax=environmental samples RepID=B3V6F1_9EURY Length = 400 Score = 153 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 8/193 (4%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIER----PAKSIRVTIHTARPGIVIGKKGE 82 + F D VR+YL KE +A + ER + +VT+ R G+VIG++G+ Sbjct: 8 RHFVDRNVERQLVREYLLKETERAGFGGLHFERAFDQTSICTKVTLQAERVGMVIGRRGK 67 Query: 83 DVEKLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 + +L++ + + ++ + E+ P L+A+++A + S LER FRRA +V N Sbjct: 68 VINELQRRIRTDFNLENPKLQVEEIENPALNAQVMASKLASALERGWYFRRAGHSSVLNV 127 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVK 199 + GAKG + ++G+L G+ RTE + +G + A +D + A G IG Sbjct: 128 IEAGAKGCLIIIAGKLTGS-RHRTEKFLKGHIKFCGETALTHMDVGQATAVVKLGTIGCT 186 Query: 200 VWIFKGEILGGMA 212 V I K Sbjct: 187 VAIMKPGTKLPHE 199 >UniRef50_A8AA20 30S ribosomal protein S3P n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=RS3_IGNH4 Length = 241 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 9/216 (4%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 K F + + KV +YL + S++ +++ RV I+ R G +IG++G+ ++ Sbjct: 9 KKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIK 68 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 ++ KV+ + G+ Q+ + +V +PELDA+++A + + L+R FRRA ++ M Sbjct: 69 QITKVLEEWFGIPNPQVTVVKVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIMGA 128 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGVKVWI 202 GA G +V+VSG+L G E AR E Y G+V + D + GV GV+V I Sbjct: 129 GAIGAQVKVSGKLRG-ERARFEKYIAGKVYKSGNQVVRLTDRAIAHVLLKVGVEGVEVII 187 Query: 203 FKG---EILGGMAAVEQPEK--PAAQPKKQQRKGRK 233 K E ++ PE+ Q +++ + + Sbjct: 188 SKKSEEERPDDEVRIKSPEEVNEIVQKIREEMQQTQ 223 >UniRef50_B3T598 Putative ribosomal protein S3, C-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T598_9ZZZZ Length = 214 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 5/203 (2%) Query: 31 DNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKV 90 + D + +YL K + A I R+TI+ +PG+VIG++G + +L + Sbjct: 3 EKFSRDSGIDEYLEKNIESAGYGGFEIITSPVGTRITIYVTKPGLVIGRRGIGIRELTEN 62 Query: 91 VADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGI 149 + I + QI++ EV PE +A+++ + + + R FRRA V MR GA G Sbjct: 63 LEKIFELQNLQISVFEVEIPEQNARIMCNRVAQTVARGTAFRRAAMWTVNAIMRSGALGA 122 Query: 150 KVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI-FKGE 206 ++ ++G+L +E + TE Y++G VP A + S+ G+ G++V I + Sbjct: 123 EIIIAGKLR-SERSHTEKYKDGVVPKTGYPATLTVREAVSDVKLKMGLYGIQVKIAIRDM 181 Query: 207 ILGGMAAVEQPEKPAAQPKKQQR 229 + M ++ EK ++ ++ ++ Sbjct: 182 VPPDMELIKDIEKERSEKERSEK 204 >UniRef50_Q9HIR5 30S ribosomal protein S3P n=3 Tax=Thermoplasmatales RepID=RS3_THEAC Length = 225 Score = 146 bits (369), Expect = 5e-34, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 8/211 (3%) Query: 25 NTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDV 84 ++F + V +Y+ KE A +V++R +T++ RPG+VIG++G V Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61 Query: 85 EKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR 143 +++ + G+ QI + +V+ P+L+ ++A I LE+ +R+A ++ ++ Sbjct: 62 QQMTDTLEKKYGIETPQIEVKDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRTIQ 121 Query: 144 LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVW 201 GAKG+ +++SG++ G E AR + + G V + S A G++GV V Sbjct: 122 AGAKGVLIKISGKISG-ERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTVK 180 Query: 202 IFKGEILGGM----AAVEQPEKPAAQPKKQQ 228 I E + E+ + K Q Sbjct: 181 ILNPEYKLPDVFSIENITGGEEVGTESKADQ 211 >UniRef50_A4YCX2 30S ribosomal protein S3P n=3 Tax=Sulfolobaceae RepID=RS3_METS5 Length = 240 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 4/183 (2%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 K F + V ++L KE A + I + RVTI+ RP I+IGK G+ ++ Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64 Query: 86 KLRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 +L +++ + QI + + KPEL+A+++A + LE+ FRRA ++ M Sbjct: 65 RLAQILEKYFNLENPQITVTQPEKPELNARVMAFRLAVTLEKGYHFRRAAFMTIRRIMNA 124 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVKVWI 202 GA G +V VSG++ +E A+ E +EG V + L +D + A G+ GV+V I Sbjct: 125 GALGAEVIVSGKIT-SERAKFEKLKEGIVYKTGNNLDVMVDRAIAIATLKMGIYGVEVVI 183 Query: 203 FKG 205 K Sbjct: 184 TKP 186 >UniRef50_B4S097 30S ribosomal protein S3 n=2 Tax=Alteromonas macleodii RepID=B4S097_ALTMD Length = 143 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 90/113 (79%), Positives = 98/113 (86%), Gaps = 1/113 (0%) Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 +LERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR+EWYREGRVPLHT RA Sbjct: 30 ADKLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTFRA 89 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 DIDY TSEA TTYG+IGVKVWIFKGE+LGG Q + PAAQPKK+ R ++ Sbjct: 90 DIDYATSEASTTYGIIGVKVWIFKGEVLGG-LPTTQEQAPAAQPKKKGRNAKR 141 Score = 66.1 bits (160), Expect = 8e-10, Method: Composition-based stats. Identities = 27/50 (54%), Positives = 35/50 (70%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA 50 MGQKVHP GIRLGI KPW STW+ANT ++AD L+ R+ + + + A Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADKLERRVMFRRAMKRAVQNA 50 >UniRef50_Q8TX35 30S ribosomal protein S3P n=1 Tax=Methanopyrus kandleri RepID=RS3_METKA Length = 227 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 6/205 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+F ++ +YL +EL +A + ++R + ++ + RP I IG++G ++ + Sbjct: 12 KKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRR 71 Query: 87 LRKVVADIAGV--PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 + + V + + I + E+ PEL+ ++VA + S LER + FRRA A++ M Sbjct: 72 VEEEVQERFPLLGRVSIEVKELPSPELNPRVVARRLASALERGIHFRRAAYGALRRIMNA 131 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 GAKG + +SG+L GA ARTE + EG V D + +A T G IGV V I Sbjct: 132 GAKGAMIILSGKLIGA-RARTEKFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRI 190 Query: 203 FKGEI-LGGMAAVEQPEKPAAQPKK 226 ++ L + PE+ + K+ Sbjct: 191 MPPDVELPDELEIRPPEEVEDELKE 215 >UniRef50_UPI000038E231 30S ribosomal protein S3P n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E231 Length = 228 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 K+F + V +YL E A + ++R +T++ RPG+VIG+ G Sbjct: 6 MMKEKKFVSDNIKKLLVTEYLQSENDSAGFGGMDMKRTPFGTNITLYVNRPGLVIGRHGS 65 Query: 83 DVEKLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 ++ + ++ G+ QI + EV +L+ ++++ I LE+ +R+A ++ Sbjct: 66 KIKAMTSILETKYGLESPQIEVKEVENADLNPQVISKKIALSLEKGWNYRKAGNTTLRRI 125 Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVK 199 + A+G+ + + G++ G E ART+ + G + A + S A G IG+ Sbjct: 126 IDQHARGVLIRIGGKISG-ERARTQKFMYGEIKYSGEPARAGVITGYSVAMLKTGAIGIY 184 Query: 200 VWIFKGEILGGMAAVEQPEKPAAQPKKQ 227 V + + + E+ P K+ Sbjct: 185 VRLLRQDYHLPDEISINTERKIPVPDKK 212 >UniRef50_Q9G889 Ribosomal protein S3 n=1 Tax=Malawimonas jakobiformis RepID=Q9G889_9EUKA Length = 215 Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 12/214 (5%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS--VSRIVIE 58 MGQ ++ G+ L K W S W+ + + +L D +R Y+ + + VI+ Sbjct: 1 MGQSINTTGLLLTHNKYWQSKWYND-NNYIFSLYEDILIRNYIKNVFKNLNLFYGKCVIK 59 Query: 59 RPAKSIRVTIHTARPGIVI------GKKGEDVEKLRKVVADIAGVPAQINIAEVRKPEL- 111 R + I + I+ + +K + +++++++ + + I ++ + Sbjct: 60 RSIQKIYIYINIYKKKRKNIINTKDKRKLINKKEIKQILQSLTKLTNNRIILIIKPTNIF 119 Query: 112 DAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK--GIKVEVSGRLGGAEIARTEWYR 169 DA+L+A I+ +LE R F K+ + + G +++ SGR G ++A +W++ Sbjct: 120 DAQLLAQYISRKLEIRNSFLSIFKKILNKINKNKKIYKGFRIQCSGRPNGNDMAYIQWFK 179 Query: 170 EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 G++PLHT IDY + A T YG+ GVKVW+ Sbjct: 180 YGQIPLHTYNYKIDYAYTTALTKYGLSGVKVWLS 213 >UniRef50_Q5QJE0 Ribosomal protein S3 n=20 Tax=Spermatophyta RepID=Q5QJE0_CYCRE Length = 579 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 9/194 (4%) Query: 32 NLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE---KLR 88 NL KV + + K + + + + I I R G + + K+R Sbjct: 386 NLLGKEKVIKLMEKLIDLGGIG--ELIKGIGMIDAIILRNRSGRIPYGYNYYLNEVQKMR 443 Query: 89 KVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV-MFRRAMKRAVQNA---MRL 144 +++D I ++ A L+A I+ QL FR + V++ M Sbjct: 444 SLLSDGTNTNTSIGSVKIESVYQSASLIAQDISFQLRNGTGSFRSIFGQIVRDITFVMPK 503 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 KGI++ SGRL GAEIARTE G+ + IDY +++ T YG++GVKVWI Sbjct: 504 RVKGIRICCSGRLKGAEIARTECREYGKTSCNVFDHKIDYASAKVCTRYGILGVKVWISY 563 Query: 205 GEILGGMAAVEQPE 218 G A E + Sbjct: 564 SNERKGRAISETYK 577 Score = 61.1 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 7/88 (7%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M ++V+P +RL + + +S+WF++ + + D +R Y T++ + R Sbjct: 1 MAREVNPISVRLNLNRSSDSSWFSD-YYYGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 IVIERPAKSIRVTIHTARPGIVIGKKGE 82 +I K + + R + ++G+ Sbjct: 60 CIIHHFTKRTFIHLFLPRRPRRLKRRGK 87 >UniRef50_UPI0001AEC3A6 30S ribosomal protein S3 n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC3A6 Length = 151 Score = 139 bits (350), Expect = 8e-32, Method: Composition-based stats. Identities = 98/123 (79%), Positives = 111/123 (90%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP GIRLGI KPW STW+ANT ++ADNL +D +VRQYLTK+L AS+S+IVIERP Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADNLYNDHQVRQYLTKQLKNASLSKIVIERP 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 AKSIRVTIHTARPG+VIGKKGEDVEKLR V+ +AGVPAQINIAEVRKPELD +LVADSI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRNYVSKLAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 TSQ 123 +SQ Sbjct: 121 SSQ 123 >UniRef50_Q1RU61 Bacterial ribosomal protein S3 n=1 Tax=Medicago truncatula RepID=Q1RU61_MEDTR Length = 158 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 24/177 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK----ASVSRIV 56 MGQK+HP G RLG +S WFA K +++NL D +R + + K + RI Sbjct: 1 MGQKIHPFGFRLGTTPNHDSIWFAQPKNYSENLKEDKIIRDCIKNYIQKTSGVEGIGRIK 60 Query: 57 IERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLV 116 I++ I+ + + + I I + D ++ Sbjct: 61 IKKRINLIQTNV--------------------QKNLNCVTRKINITITRIPNTYSDPNIL 100 Query: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV 173 A+ I QL+ R+ FR+A+K+A++ A + KG++V+++GR+ G EIA EW REG V Sbjct: 101 AEFIAGQLKNRISFRKAIKKAIELAEQTCTKGVQVQIAGRIDGKEIACVEWIREGDV 157 >UniRef50_B9WLS6 Ribosomal protein, small subunit, putative n=5 Tax=Saccharomycetales RepID=B9WLS6_CANDC Length = 254 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + K+ + ++ ++ T+ELA+ + + + + + V + + V+G++G Sbjct: 7 SKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRR 66 Query: 84 VEKLRKVVADIAGVPAQ---INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 + +L ++ + + I V + L A + A+++ ++L + RRA ++ Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRF 126 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGV 198 AM GAKG++V +SG+L A A+++ Y +G + R ID GV+G+ Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185 Query: 199 KVWIFKG 205 KV I K Sbjct: 186 KVKIMKD 192 >UniRef50_Q38EW1 40S ribosomal protein S3, putative n=2 Tax=Trypanosoma brucei RepID=Q38EW1_9TRYP Length = 266 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 6/207 (2%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + + + ++ ++L +ELA + + + I + + V+G+KG Sbjct: 57 SKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRR 116 Query: 84 VEKLRKVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 + +L + Q+ V L A A+S+ +L + RRA ++ Sbjct: 117 IRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRY 176 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGV 198 M GAKG +V + G++ G + A++ +R+G + + +D T H G IGV Sbjct: 177 VMESGAKGCEVTIGGKIKG-QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGV 235 Query: 199 KVWIFKGEILGGMAAVEQPEKPAAQPK 225 V I + + + V +PK Sbjct: 236 NVKIMRPQSMIEEDEVLPDVITVIEPK 262 >UniRef50_B1L650 Ribosomal protein S3 n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L650_KORCO Length = 251 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 96/196 (48%), Gaps = 4/196 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+F +K+ +++ K KA + I +T++ PG++IG+ G ++ Sbjct: 11 KKFVQEGIVKYKLHEFMEKISDKAGFHGVEISSTPIRDIITVYVESPGVMIGRGGRTSKR 70 Query: 87 LRKVVADIAGV-PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 + ++ + G+ I +V KP L ++VA I ++ + +++ A+ M G Sbjct: 71 ISDILKEELGIQNPYIQAKKVDKPFLSTRIVASYIARRIAKGERYKKVAYSALGRVMAEG 130 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGVKVWIF 203 AKG+++ +SG+ G++ AR E +REG + +++Y G+IGV+V I Sbjct: 131 AKGVEIRLSGKF-GSQRAREERFREGVIYRCGQDYIENVEYAVKHVLMPQGMIGVRVRIV 189 Query: 204 KGEILGGMAAVEQPEK 219 K + G A V + ++ Sbjct: 190 KPGVRGPDAVVIKEDE 205 >UniRef50_D2DX72 Ribosomal protein S3 n=1 Tax=Cephalotaxus sinensis RepID=D2DX72_9CONI Length = 763 Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 5/168 (2%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP 98 +R L L + + R I + R +V K+R +++ Sbjct: 594 LRNRLGSRLESIDLGGF-MRRIGMMIGILPKNRRIPYGYNYYLNEVRKMRSLLSGGTNAN 652 Query: 99 AQINIAEVRKPELDAKLVADSITSQLERR-VMFRRAMKRAVQNA---MRLGAKGIKVEVS 154 I ++ A +A I+ QL FR + V++ M G GI++ S Sbjct: 653 TSIGSVKIESVYQSASSIAQDISFQLRDGTRSFRSIFGQIVRDIPLVMPKGVGGIRICCS 712 Query: 155 GRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 GRL GAEIARTE G+ + R IDY ++ T YG++GVKVWI Sbjct: 713 GRLKGAEIARTECREYGKTSCNAFRHQIDYAYAKVSTRYGILGVKVWI 760 >UniRef50_Q8W9Q9 Ribosomal protein S3 n=1 Tax=Mesostigma viride RepID=Q8W9Q9_MESVI Length = 210 Score = 136 bits (342), Expect = 8e-31, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 21/217 (9%) Query: 1 MGQKVHPNGIRLG-IVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKA---SVSRIV 56 MGQK +P +R + S W+ + K ++ L DF +R Y+ K L + ++I Sbjct: 1 MGQKSNPQALRTAAPYQQHESCWYHD-KYYSHLLSQDFMIRSYIEKRLKGCFPSASAKIF 59 Query: 57 IERPAKSIRVTIHTARPGIV--IGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAK 114 + K +++ I + + + KK D+ K+ K ++ I +++ A Sbjct: 60 LSSSPKELKLRIFSHGHLFLKRLKKKSYDISKILKKSSNTTSF--SIQCYQIKNEYKSAL 117 Query: 115 LVADSITSQLERRVM-------FRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEW 167 +A+ +T ++R+ M F R + A KGI+V GR G+E R + Sbjct: 118 FLANLLTQAIKRKKMMSLPSLLFLRTINEA-----SDFIKGIRVSCVGRFKGSERTRKKK 172 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 ++ G LHT I+Y++ T+YG GVKVW+ Sbjct: 173 FQWGSTSLHTFSEKIEYSSQSISTSYGTFGVKVWVCY 209 >UniRef50_D2DX66 Ribosomal protein S3 n=2 Tax=Taxaceae RepID=D2DX66_TORCL Length = 802 Score = 135 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 4/150 (2%) Query: 57 IERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLV 116 + R I + R +V K+R +++ I ++ A + Sbjct: 650 MRRMGMMIGIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTSIGSVKIESVYQSASPI 709 Query: 117 ADSITSQLERR-VMFRRAMKRAVQNA---MRLGAKGIKVEVSGRLGGAEIARTEWYREGR 172 A I+SQL FR R V++ M G GI++ GRL GAEIARTE G+ Sbjct: 710 AQDISSQLRDGTRSFRSIFGRIVRDIPLVMPKGVGGIRICCPGRLKGAEIARTECREYGK 769 Query: 173 VPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 + R IDY ++ T YG++GVKVWI Sbjct: 770 TSCNAFRHQIDYAYAKVSTRYGILGVKVWI 799 Score = 40.3 bits (93), Expect = 0.047, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M +KV+P +RL + + +S+ + + D R+Y T++ + R Sbjct: 1 MARKVNPISVRLHLNRSSDSS-RFSDYYHGKPMYQDVNPREYFGSIRPPTRKTFGFRLGR 59 Query: 55 IVIERPAKSIRVTIH 69 ++ K + + Sbjct: 60 CILHHSPKRTFIHLF 74 >UniRef50_D2DX63 Ribosomal protein S3 n=1 Tax=Sciadopitys verticillata RepID=D2DX63_SCIVE Length = 786 Score = 135 bits (341), Expect = 9e-31, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 3/184 (1%) Query: 21 TWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKK 80 ++A K + K + + + + I + + R Sbjct: 601 IYYARQKLLGKLRRKLRNDSGLVEKFIDLGGIGGL-MRGIGMMIGIILKNRRIPYAYNYY 659 Query: 81 GEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR-VMFRRAMKRAVQ 139 +V K+R +++D I ++ A +A I+ +L R FR + V+ Sbjct: 660 LNEVRKMRSLLSDRTNTHTFIGSVKIESVYQSASPIAQDISLKLRDRTRSFRSIFNQIVR 719 Query: 140 NAMR-LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGV 198 R G +GI++ SGR GAEIARTE G+ + IDY ++ T YG++GV Sbjct: 720 EMPRGQGVRGIRICCSGRSKGAEIARTECREYGKTSCNAFCHKIDYAYAKVSTRYGILGV 779 Query: 199 KVWI 202 KVWI Sbjct: 780 KVWI 783 Score = 59.2 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 17/88 (19%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK----------- 49 M KV+P +RL + + +S+WF++ + + D +R+Y + Sbjct: 1 MAPKVNPISVRLHLNRSSDSSWFSD-YYYGQFMYQDVNLREYFGSIRSPTRKRKRKRKRK 59 Query: 50 -----ASVSRIVIERPAKSIRVTIHTAR 72 + R ++ K + + R Sbjct: 60 SNSLGFRLGRCILHHSPKRTFIHLFIPR 87 >UniRef50_Q0P3H9 Mitochondrion, complete genome n=1 Tax=Ostreococcus tauri RepID=Q0P3H9_OSTTA Length = 277 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 104/279 (37%), Gaps = 75/279 (26%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS--VSRIVIE 58 MGQK+ P +RL K + ++W++ K +A+ + +V+ +L + ++ + Sbjct: 1 MGQKISPVALRLQTNKSFQASWYSQ-KLYAEGVHKQLQVQNFLHDVFHQVGTKATKTHVV 59 Query: 59 RPAKSIRVTIHTARPGIV------------------------------------IGKKGE 82 + ++++ P + + KK Sbjct: 60 QTPGALKIHTFFCSPRLFDQKLAKKTMSLKPTHFFQHQRTTQWQFLSNQMHWETLKKKLV 119 Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDA----------------------------- 113 LR + + N+ E + + +A Sbjct: 120 FQSLLRNNLQKSTTLHLT-NLFEQTRHKTNALKFYANHLEAVSQQYFKTATQWEPVKLQE 178 Query: 114 -----KLVADSITSQLERRVMFRRAMKRAVQNAMRL-GAKGIKVEVSGRLGGAEIARTEW 167 + VA+ ++ LER+ ++ + +G K+ SGRL G E+A+ E Sbjct: 179 FTKSAQFVAEYVSHALERQKPVKQIFSSVQTLLKKDPNVEGFKISCSGRLQGVEMAKIET 238 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 ++ G++ LH + +DY + A TT+G++GVKVWI + Sbjct: 239 FKFGKISLHVFTSKVDYAEARALTTFGILGVKVWICYKD 277 >UniRef50_Q8SQM3 40S ribosomal protein S3 n=2 Tax=Apansporoblastina RepID=RS3_ENCCU Length = 228 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 93/200 (46%), Gaps = 9/200 (4%) Query: 29 FADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLR 88 F N + +++++ K L S + + I++ + A+P IG+K + + + Sbjct: 22 FMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQFQ 81 Query: 89 KVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 + A VP +I + +V + L A + A+ I ++ V +RRA+ A++ A Sbjct: 82 HLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAK 141 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGVKVWIF 203 A+G ++ VSG+L G + A++ +++G + ++ I+ + T GVIG++V I Sbjct: 142 AQGCQIIVSGKLKG-QRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIM 200 Query: 204 KGEILGGMAAVEQPEKPAAQ 223 + V P P Sbjct: 201 ---LPYDPEGVLGPNYPLPD 217 >UniRef50_Q1XG99 Ribosomal protein S3 n=1 Tax=Physcomitrella patens RepID=Q1XG99_PHYPA Length = 535 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Query: 77 IGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKR 136 + + +K++ +++ I ++ A L+A I+ +LE++ FR+ + Sbjct: 406 LFSRYYYWKKMQFFLSNQTKTNTLIRPVKIASVYQSASLIAQEISWKLEQKKSFRQICRS 465 Query: 137 AVQNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGV 195 Q + KGI++ SGRL GAEIA+TE + G LH IDY ++A T YG+ Sbjct: 466 TFQQIEKCQYVKGIRICCSGRLNGAEIAKTECRKYGETSLHVFSDQIDYAKAQASTPYGI 525 Query: 196 IGVKVWIFK 204 +GVKVW+ Sbjct: 526 LGVKVWVSY 534 Score = 68.1 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS------VSR 54 M QK++P +RL + + +S+WF++ + L D R Y + + Sbjct: 1 MAQKINPISVRLNLNRSSDSSWFSD-YYYGKLLYQDVNFRDYFDLIRPPTGKTFGFRLGK 59 Query: 55 IVIERPAKSIRVTIH 69 +I K + + Sbjct: 60 FIIHHFPKRTFIHVF 74 >UniRef50_A3MTL3 30S ribosomal protein S3P n=2 Tax=Thermoproteaceae RepID=RS3_PYRCJ Length = 216 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 8/205 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+ + + ++++L LAK I + R+ I+ RP +IG+KG V++ Sbjct: 12 KKILEENKKKWMIKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71 Query: 87 LRKVVADIAGVPA----QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 + ++A+ GV I+++++ PEL K+VA I + + R V FRR M AV+ M Sbjct: 72 VSSILANKLGVENPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQLM 131 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKV 200 GAKG ++ VSG+L E A+ E G++ A + G+ G++V Sbjct: 132 EAGAKGFEIVVSGKLS-TERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 190 Query: 201 WIFKGEI-LGGMAAVEQPEKPAAQP 224 I + ++ P +P A Sbjct: 191 RITPATLRYSDEYKIKPPTRPEAAA 215 >UniRef50_D2DX40 Ribosomal protein S3 n=4 Tax=Podocarpaceae RepID=D2DX40_9CONI Length = 618 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 14/206 (6%) Query: 11 RLGIVKPWNSTWFANTKEFADNLDS-DFKVRQYLTKELAKAS-------VSRI--VIERP 60 R+G + + W + K L +R++ + K S + RI V+ Sbjct: 412 RIGGARTYL-LWRSKKKILTYLLRRSKEILRKHFHTYIHKGSGSVKKVILGRIGGVMRGI 470 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + + + A +V+K+R +++ I +++ A +A I Sbjct: 471 EMMLEIRLRGAGIPYGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSASPIAQDI 530 Query: 121 TSQLERRVMFRRAMKRAVQNA---MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 +S+L R FR V++ M GI++ SGRL GAEIARTE G+ + Sbjct: 531 SSRLRDRKSFRSIFYEPVRDIPLVMLKRVGGIRICCSGRLKGAEIARTECMEYGKTSCNA 590 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIF 203 R IDY ++ T YG++GVKVWI Sbjct: 591 FRHRIDYASARVSTRYGILGVKVWIS 616 Score = 59.2 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 8/78 (10%) Query: 2 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL-------TKELAKASVSR 54 QKV+P +RL + + +S+WF++ + + D R Y + + R Sbjct: 41 AQKVNPISVRLHLNRSSDSSWFSD-HYYGKLVYQDVNPRDYFGSIRPPTRRNPFGFRLGR 99 Query: 55 IVIERPAKSIRVTIHTAR 72 ++ K + + R Sbjct: 100 CILHHSPKRAFIHLFLPR 117 >UniRef50_Q22AV9 KH domain containing protein n=3 Tax=Oligohymenophorea RepID=Q22AV9_TETTH Length = 243 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 7/205 (3%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 K+F + + ++ + +K L A + I + R + I +P VIG +G+ Sbjct: 9 NKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGKK 68 Query: 84 VEKLRKVVADIAGV---PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 ++L + + G QI ++ L A +++ +L + V R A +++ Sbjct: 69 HKELTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKS 128 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGV 198 ++ GAKG ++ +SG+L + A+T +++G + ID G++GV Sbjct: 129 VIQDGAKGCEIIISGKLK-QQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGV 187 Query: 199 KVWIFKGEILGGMAAVEQPEKPAAQ 223 KV I A + P Sbjct: 188 KVKIMLP-YEPNPAKKFGVKTPIPD 211 >UniRef50_A9BL58 Rps3 n=1 Tax=Cryptophyta RepID=A9BL58_9CRYP Length = 246 Score = 133 bits (336), Expect = 4e-30, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 9/205 (4%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + K+F ++ ++ + L++EL+ + + I + + + + ++G +G Sbjct: 35 SKQKKFINDGVFFSELNELLSRELSDEGYTNVEIRKAPLKTEIILKMTQTHSILGSRGRR 94 Query: 84 VEKLRKVVADIAG---VPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 ++++ ++ +I + ++ L A A+S+ +L R ++ RRA +++ Sbjct: 95 IKEINGLIKKRFQFDEKSLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRRACYSTLKS 154 Query: 141 AMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGV 198 M GAKG + VSG+L A+ A+T + +G + I+ T GVIG+ Sbjct: 155 TMESGAKGCIISVSGKLR-AQRAKTMKFIDGYIIHSGKPVEDYIEKATRHCFLRQGVIGI 213 Query: 199 KVWIFKGEILGGMAAVEQPEKPAAQ 223 K+ I + A V P+KP Sbjct: 214 KISIM---LPWDPAGVRGPKKPLPD 235 >UniRef50_Q05FJ0 30S ribosomal protein S3 n=2 Tax=Candidatus Carsonella ruddii RepID=RS3_CARRP Length = 203 Score = 133 bits (335), Expect = 5e-30, Method: Composition-based stats. Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 6/206 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG+K++P RL ++S W+ K F L D +R+ + + ++S I I Sbjct: 1 MGKKINPILFRLKKNTVYHSLWYTFKKNFCYYLKCDILIREIIRRNFLFINLSYIDII-I 59 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + + + ++ + ++ ++ I +N V L+AK +A ++ Sbjct: 60 SNKLTINLYINNVDQFNIIEN-YLDVFVFQISKILKKNVILNF--VFNHVLNAKNIAYNV 116 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 +Q+ + ++ +K + + G K+++SGRL G +IAR EW GR+PLHT++ Sbjct: 117 VNQILNKNSIKKIIKEELLKNRKNF--GCKIQISGRLEGVDIARKEWSLIGRIPLHTIKY 174 Query: 181 DIDYNTSEAHTTYGVIGVKVWIFKGE 206 +++Y E T YG++GVK+W+FK Sbjct: 175 NLEYYQCETLTQYGILGVKIWLFKKN 200 >UniRef50_Q85UK5 30S ribosomal protein S3, chloroplastic (Fragment) n=1 Tax=Orobanche minor RepID=Q85UK5_OROMI Length = 166 Score = 132 bits (332), Expect = 9e-30, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 11/166 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK--------ASV 52 M QK++P RLG + +S WF K+++++L D K+R + + K + Sbjct: 1 MAQKINPLVFRLGTTQNHHSLWFVQAKKYSESLQEDQKIRNLIKNYVQKKVSNSSDIEGI 60 Query: 53 SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIA---GVPAQINIAEVRKP 109 + I I++ I+V I P ++I +E+L+ + I I + KP Sbjct: 61 APIEIKKRIDLIQVIIFMGFPKLLIESIPRGIEELQMNLQKEFHYVNRKFNIAITRITKP 120 Query: 110 ELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSG 155 + ++A+ I +QL RV FR+AMK+A++ + KGI+V++SG Sbjct: 121 YRNPNIIAEFIANQLNNRVSFRKAMKKAIELTEQANTKGIQVQISG 166 >UniRef50_D2DWK6 Ribosomal protein S3 (Fragment) n=1 Tax=Gnetum montanum RepID=D2DWK6_9SPER Length = 684 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 9/158 (5%) Query: 62 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT 121 I + + R +V K+R +++D ++ A L+A I+ Sbjct: 518 MMISIILRNRRIPYGYNYYLNEVRKVRSLLSDRTNTNTFFGSVKIESVYQSASLIAQDIS 577 Query: 122 SQLERR---VMFRRAMKRAVQNAMR------LGAKGIKVEVSGRLGGAEIARTEWYREGR 172 QL R FR + V++ G +GI++ SGRL GAEIARTE G+ Sbjct: 578 FQLRGRNRTRSFRSIFSQIVRDIPNPKVMPPKGVRGIRICCSGRLKGAEIARTECREYGK 637 Query: 173 VPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210 ++ IDY +++ T YG++GVKVWI + G Sbjct: 638 TSINVFCQKIDYASAKVSTRYGILGVKVWISYSSVKGR 675 >UniRef50_A8B8Z2 Ribosomal protein S3 n=2 Tax=Giardia intestinalis RepID=A8B8Z2_GIALA Length = 217 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 9/201 (4%) Query: 14 IVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARP 73 + + + +++ ++ ++ + ++ ++ ++EL A + + R SI V I A P Sbjct: 5 VRRDEENVYYS---KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEP 61 Query: 74 GIVIGKKGEDVEKLRKVVADIAG---VPAQINIAEVRKPELDAKLVADSITSQLERRVMF 130 +V+G + K+ ++A I + ++ K L A+++ D++ ++LE + Sbjct: 62 EVVMGDNHYRLHKIEYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPI 121 Query: 131 RRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRADIDYNTSE 188 RRA ++ AMR GA G +V V+G+L A+ AR ++EG + H R + T Sbjct: 122 RRAAYSIIRTAMRAGAAGCEVIVAGKLR-AQRARANKFKEGCLISTGHPKRIFLAEATRH 180 Query: 189 AHTTYGVIGVKVWIFKGEILG 209 GVIGVKV I+ I G Sbjct: 181 IKMRQGVIGVKVRIYNPNIRG 201 >UniRef50_A6YEA6 Ribosomal protein S3 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEA6_CHLAT Length = 736 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 4/167 (2%) Query: 39 VRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP 98 +R KE ++ + + + + RP K ++ ++++ Sbjct: 572 IRDKKNKENLNSNPFQTKVRSTDSNFHL---LNRPLQRSQKILNFTNHIKSIISNGTLCH 628 Query: 99 AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG-AKGIKVEVSGRL 157 I ++++P A+LVA I +LE+R FR+ ++ +++ R +GI++ +GR Sbjct: 629 TSIRPVKIKEPFKSAELVAQDIAFKLEKRESFRKISRQIIKDIKRCKYVEGIRITCAGRF 688 Query: 158 GGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 GAE+AR E R G+ LH IDY++ A+T YG+ GVKVWI Sbjct: 689 NGAEMARVESRRFGQTSLHVFSKKIDYSSKTAYTPYGLFGVKVWISY 735 Score = 68.8 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK--ELAKASVSRIVIE 58 MGQK +P +R + + +S W+ + +A+ L D +R Y L K + R +++ Sbjct: 1 MGQKTNPISVRNQLNRAPDSCWYND-YNYANLLFHDLNLRSYYQSLLRLIKLNSGRCILQ 59 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDVEKLR 88 K + + + KKG + LR Sbjct: 60 ISPKKVSLVFFYSNNLTYQSKKGTPILPLR 89 >UniRef50_Q95749 Ribosomal protein S3, mitochondrial n=5 Tax=Brassicaceae RepID=RT03_ARATH Length = 556 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 4/189 (2%) Query: 32 NLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVV 91 NL K+ + + K + + I+ I + + +V+K+R + Sbjct: 369 NLVGKDKIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFL 427 Query: 92 ADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-RRVMFRRAMKRAVQNAMRLGAKGIK 150 ++ I +++ A L+A I+ QL+ +R F + V+ + G +GI+ Sbjct: 428 SNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIR 486 Query: 151 VEVSGRLG-GAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILG 209 + SGRL AE A+T+ Y+ + + IDY E T YG++GVKVWI + G Sbjct: 487 ICFSGRLKDAAEKAQTKCYKHRKTSCNVFNHKIDYAPVEVFTRYGILGVKVWISYSQKKG 546 Query: 210 GMAAVEQPE 218 A E E Sbjct: 547 RRAISETYE 555 Score = 58.8 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M +K +P +RLG + +S+WF+ + + D +R Y T+ + R Sbjct: 1 MARKGNPISVRLGKNRSSDSSWFS-EYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 IVIERPAKSIRVTIH 69 +I K + Sbjct: 60 CIILHFPKRTFIHFF 74 >UniRef50_D2DX51 Ribosomal protein S3 n=19 Tax=Cupressaceae RepID=D2DX51_9CONI Length = 663 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 7/158 (4%) Query: 52 VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPEL 111 + +V R IR+ R +V K+R +++ I +++ Sbjct: 501 LGGLVRRRIGMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKYVYQ 560 Query: 112 DAKLVADSITSQLERR-VMFRRAMKRAVQNA------MRLGAKGIKVEVSGRLGGAEIAR 164 A +A I+ QL FR + + V+ +R G GI++ GRL GAEIAR Sbjct: 561 SASPIAQDISFQLRDGTRSFRSILWKIVRGISLVMPKLRKGVGGIRICRPGRLKGAEIAR 620 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 TE G+ +T R IDY ++ T YG++GVKVWI Sbjct: 621 TECREYGKTSCNTFRHQIDYAYAKVSTRYGILGVKVWI 658 >UniRef50_C7DIC2 Ribosomal protein S3-domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIC2_9EURY Length = 207 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 99/203 (48%), Gaps = 3/203 (1%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 + F D+ + ++L EL+KA SR+ I++ R+T++ PG VIG+ G+ Sbjct: 1 MVIERRFIDDAIIKLNISKFLGTELSKAGFSRVEIQKTPIITRITVYVLNPGRVIGRGGK 60 Query: 83 DVEKLRKVVADIAG-VPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 ++ L + + +I++ EV+ ++ LVA I +LER + R+ ++ +++ Sbjct: 61 AIDDLTETIKSRFNVNNPRISVVEVQNKMIEPLLVAKDIAFKLERGINPRKIIQFTLKSI 120 Query: 142 MRLGAKGIKVEVSGRLGGA-EIARTEWYREGRVPLHTLRAD-IDYNTSEAHTTYGVIGVK 199 M GA G ++ +SG+L A++ G +P + ++ + A+ YG IGV Sbjct: 121 MENGALGAEIIISGKLAAKGARAKSIRKSVGYIPKAGDVINLVNKGVATAYPKYGAIGVV 180 Query: 200 VWIFKGEILGGMAAVEQPEKPAA 222 V I + +++ E P + Sbjct: 181 VRIVPPGTVFPDREIKKVEIPRS 203 >UniRef50_P26865 Ribosomal protein S3, mitochondrial n=2 Tax=Marchantiophyta RepID=RT03_MARPO Length = 430 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 3/146 (2%) Query: 77 IGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKR 136 + + ++K++ + ++ I ++ A L+A I+ +LE++ FR+ + Sbjct: 283 LSSRYYYLKKMQSLFSNQTKTNTLIQPVKIASVYQSASLIAQEISWKLEQKKSFRQICRS 342 Query: 137 AVQNAMRL-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGV 195 + + KGI++ SGRL GAEIA+TE + G LH IDY ++A T YG+ Sbjct: 343 IFKQIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGI 402 Query: 196 IGVKVWIFK--GEILGGMAAVEQPEK 219 +GVKVW+ + G A+ + K Sbjct: 403 LGVKVWVSYFLTQKKGTSCAISKTYK 428 Score = 69.6 bits (169), Expect = 8e-11, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS------VSR 54 M QKV+P +RL + + +S+WF++ + L D R Y + R Sbjct: 1 MAQKVNPISVRLNLNRSSDSSWFSD-YYYGKLLYQDLNFRDYFGSIRPPTGNTFGFRLGR 59 Query: 55 IVIERPAKSIRVTIH 69 +I K + + Sbjct: 60 CIIHHFPKRTFIHVF 74 >UniRef50_D2DXC4 Ribosomal protein S3 n=9 Tax=Cupressaceae RepID=D2DXC4_THUDO Length = 613 Score = 130 bits (326), Expect = 5e-29, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 7/158 (4%) Query: 52 VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPEL 111 + +V R IR+ R +V K+R +++ I +++ Sbjct: 451 LGGLVRRRIGMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQ 510 Query: 112 DAKLVADSITSQLERR-VMFRRAMKRAVQNA------MRLGAKGIKVEVSGRLGGAEIAR 164 A +A I+ Q FR + + V++ +R G GI++ GRL GAEIAR Sbjct: 511 SASPIAQDISFQPRDGTRSFRSILWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIAR 570 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 TE G+ +T R IDY ++ T YG++GVKVWI Sbjct: 571 TECREYGKTSCNTFRHQIDYAYAKVSTRYGILGVKVWI 608 >UniRef50_B2X260 30S ribosomal protein S3, chloroplastic n=1 Tax=Floydiella terrestris RepID=B2X260_9CHLO Length = 611 Score = 130 bits (326), Expect = 5e-29, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 101/173 (58%), Gaps = 7/173 (4%) Query: 41 QYLTKELAKASVSRIVIERPAKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPA 99 + + ++ +SR + +R K+ I +++ + KK D E + IA + Sbjct: 435 NNVQNKKYQSLISRAIQKRMKKNLILMSLRNRFDKVANFKKVYDTENFTTLCEKIAKIQT 494 Query: 100 Q-----INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL-GAKGIKVEV 153 I V+ P L A +A+ I +L++R FR +MK+A ++AM+ G KGIK+++ Sbjct: 495 FPKITSIEFVSVKTPTLYAVCLANFIVEKLQKRFSFRGSMKKAKEDAMKTPGIKGIKIQI 554 Query: 154 SGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 +GRL GAEIARTEW R GRVPL TL+A IDY+ A T YG++GVKVW+FK Sbjct: 555 AGRLNGAEIARTEWMRAGRVPLQTLKAKIDYSYKTASTIYGILGVKVWLFKDN 607 Score = 71.2 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 13/89 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSR------ 54 MGQK+HP G R+GI + + WFA+ ++ + DF +R+ L K L ++ + Sbjct: 1 MGQKIHPFGFRVGITQKHYARWFASPDKYPQYVLEDFLIRKSLYKLLPPENLPKKMEDSG 60 Query: 55 ------IVIERPAKS-IRVTIHTARPGIV 76 I IER ++ I++ I+ PG Sbjct: 61 KMRVVHIKIERFLRNTIQIKIYAVNPGAF 89 >UniRef50_Q06SI4 30S ribosomal protein S3, chloroplastic n=112 Tax=cellular organisms RepID=RR3_STIHE Length = 1126 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 6/181 (3%) Query: 31 DNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKV 90 + ++ T++ + I + + + + + K DV+ K+ Sbjct: 939 QKIYERKPIKLMYTRKQKFLAKKTIKKKLKHFLVLMALKNNYTNLSSLKNIYDVKTFAKL 998 Query: 91 VADIAGVPAQ-----INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR-L 144 ++ + I + +V +P+ A +A+ + LE+R FR MKRA + AM Sbjct: 999 CENLTNLQTMPKVSVIELVKVHQPKQYAVCLANFVVENLEKRFSFRSTMKRASEQAMSTA 1058 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 KGIK+++SGRL GAEIARTEW R+G VPL TLRA+IDY+ A T YG++GVKVW+FK Sbjct: 1059 NVKGIKIQISGRLNGAEIARTEWLRDGVVPLQTLRANIDYSYKTAKTIYGILGVKVWLFK 1118 Query: 205 G 205 Sbjct: 1119 D 1119 Score = 69.2 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 42/72 (58%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQK+HP G R+GI +P ++ WFANT ++ + DF +RQ L K L ++ R E Sbjct: 1 MGQKIHPYGYRVGITQPHSARWFANTYQYPQYVFEDFLLRQSLFKNLPVENLPRKRTEDK 60 Query: 61 AKSIRVTIHTAR 72 +++ V I R Sbjct: 61 SETKLVQIKIER 72 >UniRef50_A4WIY8 30S ribosomal protein S3P n=4 Tax=Thermoproteaceae RepID=RS3_PYRAR Length = 220 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 8/202 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K+ + + ++++L L+K I + R+ I+ RP +IG+KG V++ Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71 Query: 87 LRKVVADIAGVPA----QINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 + ++A GV I+++++ PE+ K+VA I + + + V FRR M A++ Sbjct: 72 VSNILATKLGVENPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLT 131 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKV 200 GAKG ++ VSG+L E AR E G++ A + G+ G++V Sbjct: 132 EAGAKGFEIVVSGKLS-TERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEV 190 Query: 201 WIFKGEI-LGGMAAVEQPEKPA 221 I + ++ P +P Sbjct: 191 RIAPASLQYSDEYKIKPPVRPE 212 >UniRef50_B9TAP3 60S ribosomal protein L16, putative n=2 Tax=Spermatophyta RepID=B9TAP3_RICCO Length = 668 Score = 127 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 5/170 (2%) Query: 32 NLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVV 91 NL KV + + K + + + I+ I + + R +++K+R ++ Sbjct: 371 NLMGKDKVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLL 429 Query: 92 ADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR-VMFRRAMKRAVQNA---MRLGAK 147 ++ I +++ A +A I+ QL + FR + V++ M+ G + Sbjct: 430 SNRTNTNTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVE 489 Query: 148 GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 197 GI++ SGRL GAEIARTE + G+ + IDY +E T YG+ G Sbjct: 490 GIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 539 >UniRef50_C0KT93 Ribosomal protein S3 (Fragment) n=50 Tax=Halimeda RepID=C0KT93_9CHLO Length = 276 Score = 127 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 21/192 (10%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI +P S W+A+ K ++ L D +R L K+ AKA +I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIA------------------GVPAQI 101 ++ + + I +P ++IGKKGE+++KL + + + + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 102 NIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAE 161 + V + + A +AD + LE+R+ ++ ++ ++ + ++ SG A+ Sbjct: 121 EVY-VIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQREKALKSSGTNAAAQ 179 Query: 162 -IARTEWYREGR 172 RT G Sbjct: 180 PRDRTVHTHMGS 191 >UniRef50_Q7YAL0 Ribosomal protein S3 n=1 Tax=Chara vulgaris RepID=Q7YAL0_CHAVU Length = 270 Score = 127 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 36 DFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK--LRKVVAD 93 + ++ + ++ ++ S + + V G L+ +++ Sbjct: 101 KHAIDYFVMQYFF---YAKNRLKFDPASALIGFVCQKESYVRFAPGRYFYFAFLQSLLSS 157 Query: 94 IAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG-AKGIKVE 152 A I +V A L+A I ++LE++ FR+ + Q + KGI++ Sbjct: 158 RAKTHTVIRPLKVASVYQSASLIAQEICNKLEQKTSFRQICRSIFQQIEKCNYVKGIRIS 217 Query: 153 VSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 SGR GAEIA+TE + G+ LH IDY ++A T YG++GVKVW+ Sbjct: 218 CSGRNNGAEIAKTECRKYGQTSLHVFSDKIDYAQAQASTPYGILGVKVWVSYS 270 Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASV-------S 53 M QKV+P +RL + + +S WF++ + + L D +R+Y Sbjct: 1 MAQKVNPISVRLNVNRSPDSCWFSD-YYYGELLYQDLNIREYFGSIRPPMGAQVFGFRPG 59 Query: 54 RIVIERPAKSIRVTIH 69 R VI K + + Sbjct: 60 RCVIHHFPKRTLIHLF 75 >UniRef50_B2X1Z6 30S ribosomal protein S3, chloroplastic n=1 Tax=Oedogonium cardiacum RepID=B2X1Z6_OEDCA Length = 596 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 27/221 (12%) Query: 8 NGIRLGIVKPWNSTWFANTKEFADNLDS-------DFKVRQYLTKELAKASV-SRIVIER 59 K S ++++ + A L ++ E+ K ++ + V++R Sbjct: 376 INWHSETSKKKKSAYYSSFRNLAQKLYLQRKKNYHKKQIEDLKKNEVKKENIKLKKVVKR 435 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKV--------------VADIAGVPAQINIAE 105 ++ + K + KL + + + + I I E Sbjct: 436 KIQNFMIDNLLKNNV----SKNSECYKLSSIYQAKVFEDLIKQLALRNSFPKISAIEIIE 491 Query: 106 VRKPELDAKLVADSITSQLERRVMFRRAMKRAVQ-NAMRLGAKGIKVEVSGRLGGAEIAR 164 V++P A +A IT +LE+R FR MK+A + KGIK+++SGRL GAEIAR Sbjct: 492 VKQPSEYAVCLAYFITQKLEKRFSFRSIMKQAKRVAIQTSSVKGIKIQLSGRLNGAEIAR 551 Query: 165 TEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 TEW REGRVPL TL AD+DY+ A T YG+IGVKVW+F+ Sbjct: 552 TEWIREGRVPLQTLEADVDYSYKTAQTLYGIIGVKVWVFRK 592 Score = 66.9 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 14/151 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL------------A 48 MGQK+HP G R+GI K + WFAN+ ++ + D +R+ LT + Sbjct: 1 MGQKIHPLGFRVGITKKHKAKWFANSDQYPQYILEDILLRKRLTSLIAPESLPRVFEDDK 60 Query: 49 KASVSRIVIERPAKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVR 107 K + + IER ++ I++ ++ P + + + + + V Sbjct: 61 KMRIVEVKIERFIQNTIKIQMYAVNPDLSSLMMDQRNNRNYSSDENNTSSNKRNRKTFVD 120 Query: 108 KPELDAKLVADSITSQL-ERRVMFRRAMKRA 137 K ++++ + +L + + + R+ M Sbjct: 121 KNSKQELIISNDNSKKLTQWKNIVRKKMFEL 151 >UniRef50_B2MWV7 Ribosomal protein S3 n=1 Tax=Hemiselmis andersenii RepID=B2MWV7_9CRYP Length = 219 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 17/221 (7%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT------------KELA 48 MGQK+ N + L K WNS W+ + + D + YL K L Sbjct: 1 MGQKIVVNSLHLKKNKNWNSFWYVDFNAYLPVFREDLYLYLYLRSFSKLKYNILKRKHLY 60 Query: 49 KASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED---VEKLRKVVADIAGVPAQINIAE 105 + + + I R KS+ + + KK + +++L + + + Sbjct: 61 QIEIVKCFIYRIDKSLVLNLQLMGLKTKQLKKSDFPFFMKQLLIRLKNFFNYKNNRFVIY 120 Query: 106 VRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIART 165 + + A A + + LE+RV F+ M + + +L GI++ GRL + A Sbjct: 121 YKIGKSTALFTALRVATLLEKRVRFQSQMVKKI--IKQLNVAGIRISCKGRLNFVDRATK 178 Query: 166 EWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 G VPL T++A+IDY A+T G+ VKVWI E Sbjct: 179 AQLSSGSVPLQTIKANIDYGLIVANTKKGLQSVKVWILNKE 219 >UniRef50_A2DIM3 Ribosomal protein S3, putative n=2 Tax=Trichomonadida RepID=A2DIM3_TRIVA Length = 216 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 84/211 (39%), Gaps = 6/211 (2%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 + + ++ + LT+EL K + + + I A + G Sbjct: 6 CTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDNHGR 65 Query: 83 DVEKLRKVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQ 139 ++++R ++ + +I I +++ L A +S+ +L R+ RRA ++ Sbjct: 66 RLQEVRMMIQKRWRLKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIR 125 Query: 140 NAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIG 197 M GA+G +V +SG+L GA A T Y+EG + + IG Sbjct: 126 FVMDAGARGCEVAISGKLRGA-RASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQATIG 184 Query: 198 VKVWIFKGEILGGMAAVEQPEKPAAQPKKQQ 228 ++V I + G++ ++ + + + + Sbjct: 185 IRVLIMLAQDPSGISGPKESQPDVIKVHEAK 215 >UniRef50_Q8M1G0 Ribosomal protein S3 n=1 Tax=Chaetosphaeridium globosum RepID=Q8M1G0_CHAGL Length = 324 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 55/118 (46%) Query: 88 RKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK 147 + G I + + A +A I ++E + FR K N+ K Sbjct: 207 NTLNQVSFGATTTIRVIRLASMYQSAASIAADIVQKIESKKSFRSICKFLFSNSFGASIK 266 Query: 148 GIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 GI++ SGR GAEIA+TE + G P H IDY ++A T YG++G+KVW+ Sbjct: 267 GIRIACSGRFNGAEIAKTECRKYGASPFHVFSEKIDYAQTKASTPYGIMGIKVWVCYK 324 Score = 69.2 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 9/103 (8%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 M QKV+P +RL + + +S WF++ + L D +R+Y V+R +I R Sbjct: 1 MAQKVNPISLRLDVNRSSDSLWFSD-YYYTKLLYEDLNLREYFNSIHKM--VTRCIIHR- 56 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINI 103 + + IH + + K+ +++ + A +++ Sbjct: 57 SFGLYTCIH-----LFCLPRKRRKHKVSRLLNSVTKEQATVSM 94 >UniRef50_C6FG16 Ribosomal protein S3 n=1 Tax=Isoetes engelmannii RepID=C6FG16_ISOEN Length = 399 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 4/137 (2%) Query: 86 KLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLG 145 K+ + + I ++ A L+A I+ +LER+ F+R + Sbjct: 261 KIETLSSSRTNTFTSIEPVKITCVYKSASLIAKEISYELERKKSFQRICGLIFERIENCN 320 Query: 146 ----AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW 201 AKGI++ SGR GAEIA+TE+ + G LH IDY + A T YG +GVKVW Sbjct: 321 CNKYAKGIRIRCSGRFKGAEIAKTEYIKSGETSLHVFSDQIDYAEAGASTPYGTLGVKVW 380 Query: 202 IFKGEILGGMAAVEQPE 218 + + Sbjct: 381 VSYYLLTYPPFQENPSS 397 Score = 69.6 bits (169), Expect = 8e-11, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 7/75 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M QKV+P +RL + +S WF++ F L DF +R Y + + R Sbjct: 1 MAQKVNPISVRLNFNRSSDSGWFSD-YYFGKLLYQDFNLRDYFGSIRPPRRNKFGLRLGR 59 Query: 55 IVIERPAKSIRVTIH 69 +I K + ++ Sbjct: 60 CIIHHFTKRTFIHLY 74 >UniRef50_Q1KVX7 30S ribosomal protein S3, chloroplastic n=3 Tax=cellular organisms RepID=RR3_SCEOB Length = 700 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 64/142 (45%), Positives = 82/142 (57%), Gaps = 5/142 (3%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELD----AKLVADSITSQLERRVMFRRAMKRA 137 E ++K R + + +I+I D A VADSI LE+R FR +K+A Sbjct: 553 EQLQKQRTICEKNIQLTPKISIQFYSVKAQDFQTRASAVADSIVDDLEKRKAFRGVIKKA 612 Query: 138 VQNAMRL-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVI 196 ++ MR KG+K++VSGRL GAEIAR+EW R GRVPL TLRA+IDY A T YG+I Sbjct: 613 KEDLMRTPKVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANIDYCYKTAQTIYGII 672 Query: 197 GVKVWIFKGEILGGMAAVEQPE 218 GVKVWI+KG P Sbjct: 673 GVKVWIYKGYTKTRKPTANSPS 694 Score = 68.5 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 17/127 (13%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFAN--TKEFADNLDSDFKVRQYLTKELAKA-------- 50 MGQK+HP G R+GI K S WFA ++A ++ D +R+ L K L + Sbjct: 1 MGQKIHPLGFRVGITKKHQSVWFARFHKHQYAQSVLEDRFLRKNLLKLLPQLFQKKLNNS 60 Query: 51 ----SVSRIVIER--PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIA 104 +S I I R I + IH + I E +E V ++ + Sbjct: 61 PNMPKISHIQIVRGLIPYEIGIQIHAQNCHM-IKSAFEGLEVQPNFVHNLLKNHLILEKN 119 Query: 105 EVRKPEL 111 V+K L Sbjct: 120 SVKKTSL 126 >UniRef50_D0FY21 30S ribosomal protein S3, chloroplastic n=1 Tax=Dunaliella salina RepID=D0FY21_DUNSA Length = 706 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 106/208 (50%), Gaps = 33/208 (15%) Query: 15 VKPWNSTWFANTKEFADNL---DSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTA 71 K S F NL + K+++ + L + S+ +E+ + I + Sbjct: 510 TKKHASFLFGTINSEGQNLCPEEQKTKIQERVRLVLDNSH-SKADLEKTLQDIFL----- 563 Query: 72 RPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELD----AKLVADSITSQLERR 127 E +EK R + D + +I I E A +VADS+ LE+R Sbjct: 564 ----------EQIEKQRNMYIDNVQLTPKIAIKFYSVKEKSVKAKASIVADSVVDALEQR 613 Query: 128 VMFRRAMKRAVQNAMRL----------GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT 177 FR+ +K+A ++ MR KG+K++VSGRL GAEIAR+EW R GRVPL T Sbjct: 614 SSFRKIIKKAKEDLMRSPISSSDGKINRVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQT 673 Query: 178 LRADIDYNTSEAHTTYGVIGVKVWIFKG 205 LRA++DY+ A+T YG+IGVKVWIFKG Sbjct: 674 LRANLDYSYKTANTIYGIIGVKVWIFKG 701 Score = 61.5 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 21/97 (21%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFAN--TKEFADNLDSDFKVRQYLTKELAKA-------- 50 MGQKVHP G+R+GI K S WFA ++A ++ D +RQ LT+ + Sbjct: 1 MGQKVHPLGLRVGITKKHQSQWFARFHKNKYAQSVLEDRMLRQTLTQLFPQLLNPVFKKQ 60 Query: 51 ---------SVSRIVIER--PAKSIRVTIHTARPGIV 76 +++I IER I + IH ++ Sbjct: 61 RDNESSIAPKITQIKIERGLIPYEIGIQIHAENCDLI 97 >UniRef50_P46307 30S ribosomal protein S3, chloroplastic n=3 Tax=Chlorophyta RepID=RR3_CHLMO Length = 800 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 60/139 (43%), Positives = 87/139 (62%), Gaps = 5/139 (3%) Query: 72 RPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEV----RKPELDAKLVADSITSQLERR 127 + K E++E+ + + + +I+I + L A +V++S+ LE+R Sbjct: 651 FDRTFLDCKFEELERRKTMWVQNLQLVPKISIKFFSVNQKALNLKASIVSESVVDALEKR 710 Query: 128 VMFRRAMKRAVQNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNT 186 FR+ +K +N MR KG+K++V+GRL GAEIARTEW R GRVPL TLRA++DY+ Sbjct: 711 KAFRKVIKTTKENLMRNSEIKGVKIQVAGRLNGAEIARTEWVRAGRVPLQTLRANLDYSY 770 Query: 187 SEAHTTYGVIGVKVWIFKG 205 A+T YG+IGVKVWIFKG Sbjct: 771 RTANTIYGIIGVKVWIFKG 789 Score = 69.2 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 32/134 (23%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFA--NTKEFADNLDSDFKVRQYLTK------------- 45 MGQKVHP+G R+GI K S WFA N +++ + D +R L K Sbjct: 1 MGQKVHPSGFRVGITKKHQSQWFARFNKNKYSQTVLEDRMIRDTLNKLFPELLNPSTKGG 60 Query: 46 ---------ELAKASVSRIVIERP--AKSIRVTIHTARPGIVIGK------KGEDVEKLR 88 + K+ +++I IER I + IH ++ K + + KL+ Sbjct: 61 SAPKRHQNARIKKSRITQIKIERNIVPYQIGIQIHAENCKLLKSSIKNLQVKKDILVKLQ 120 Query: 89 KVVADIAGVPAQIN 102 K + + +++ Sbjct: 121 KTRQYLTNLKIKLD 134 >UniRef50_A0RVX9 30S ribosomal protein S3P n=2 Tax=Thaumarchaeota RepID=RS3_CENSY Length = 261 Score = 116 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 5/173 (2%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 K + K+R++L + + + S + +E+ + ++T+H RPGIVIG+KG + + Sbjct: 5 KSVIRENYNMMKLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRE 64 Query: 87 LRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM-RL 144 L + + + Q+++ E+ PEL ++ + + S +ER FRRA +Q M + Sbjct: 65 LTERLEKDFDLKSPQVDVKEIETPELYPGVMCNRMASHIERGTAFRRATMWTIQQIMEKK 124 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDY--NTSEAHTTYGV 195 A G+++ +SG+L G + + E + G +P AD+ + T G+ Sbjct: 125 DAMGVQITISGKLRG-DRSAFEKHTSGILPRAGHYADVIVLDDVVHVKTPMGL 176 >UniRef50_O21249 Ribosomal protein S3 n=1 Tax=Reclinomonas americana RepID=O21249_RECAM Length = 287 Score = 115 bits (289), Expect = 9e-25, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 111/275 (40%), Gaps = 72/275 (26%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKE--LAKASVSRIVIE 58 MGQKV+P +R+G+ + W+S W ++ K++ L+ D +R ++ + + ++ I Sbjct: 1 MGQKVNPISLRIGVNQMWDSRW-SHDKKYGKYLEQDLLIRSFIEDLCGYQEIFIGKLSIW 59 Query: 59 RPAKSIRVTI-----HTARPGIVI---------------GKKGEDVEKLRKVVADIA--- 95 R +T+ +T +P + I +K E + L + + Sbjct: 60 RSCSMNSLTVNLTDTNTVKPNLFIYFQMYVPYKTYSTNKEQKQEWLSNLENTIYNYLEDR 119 Query: 96 ---GVPAQINIAEV------------RKPELDAKL---------------VADSITSQLE 125 + I + +K E+D ++ I ++ + Sbjct: 120 FRNTFNISLLIDPIFEENSGDSKRSKQKTEIDFTFNNDVIKWLLNKDCLMISQWIANEFQ 179 Query: 126 RRVMFR---RAMKRAVQNAM------RLGAKGIKVEVSGRLG-------GAEIARTEWYR 169 +R + R +++ + + GIK+ SGR ++AR + ++ Sbjct: 180 KRKGLKEVCRIIEKCFDHIKTEAIDLKYRIDGIKITCSGRFKMTDNEKRRNKMARIKTFK 239 Query: 170 EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 +G++PL TL I+Y+ + A+T G G+KVWI Sbjct: 240 KGQIPLQTLSKHINYHLATAYTPDGTSGIKVWISY 274 >UniRef50_Q08365 30S ribosomal protein S3, chloroplastic n=2 Tax=cellular organisms RepID=RR3_CHLRE Length = 712 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 8/131 (6%) Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELD----AKLVADSITSQLERRVMFRRAMKRAV 138 +E RK+ + +I+I + A VADSI LE+R FR +K+A Sbjct: 578 QIESQRKMYKANLALTPKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAK 637 Query: 139 QNAM----RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 ++ M KG+K++V+GRL GAEIAR+EW R GRVPL TLRA+IDY A+T YG Sbjct: 638 EDLMLRSRVTRVKGVKIQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYG 697 Query: 195 VIGVKVWIFKG 205 +IGVKVWIFKG Sbjct: 698 IIGVKVWIFKG 708 Score = 61.5 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 25/127 (19%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFA--DNLDSDFKVRQYLTKELAKA-------- 50 MGQKVHP G R+GI K S WFA +++A ++ D +R L + Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSNLEKESALAT 60 Query: 51 --------------SVSRIVIERPAKSIRVTIHTARPGIV-IGKKGEDVEKLRKVVADIA 95 +++I IER + I + I K ++++ + +V ++ Sbjct: 61 KQSKNRGATQPKAPKITQIKIERGLIPYEIGIQIHSNDCLSITKAIDNIKVSKDLVTNLQ 120 Query: 96 GVPAQIN 102 + Sbjct: 121 KTRKYLF 127 >UniRef50_Q9TCB0 Ribosomal protein S3 n=1 Tax=Nephroselmis olivacea RepID=Q9TCB0_NEPOL Length = 309 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 6/184 (3%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASV--SRIVIERPAKSIRV---TIHTARPGIVIGKK 80 ++ ++ L ++ +L AS+ + K+ R+ + + K Sbjct: 124 SRIYSPQLFFLSALQSFLQHNYKVASLCLESTNQGKQRKNFRISQPFLTNNFTRKWLYPK 183 Query: 81 GEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQN 140 ++++ + Q+ + + A IT QLE++ + + ++ Sbjct: 184 DSFLQQVESSINKNVDCSTQVFLMKSSNSLSSANFFVKEITYQLEKKSSINQIWNQVMKK 243 Query: 141 AMRL-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVK 199 ++ +GI++ V+GR+ G E+ARTE + G+ LH+L +DY S A+T +G++GVK Sbjct: 244 VIQTPSIQGIRLSVAGRINGVEMARTEIRKYGQTSLHSLSNKMDYACSHAYTPFGILGVK 303 Query: 200 VWIF 203 +WI Sbjct: 304 IWIC 307 Score = 53.8 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 4/96 (4%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFAN---TKEFADNLDSDFKVRQYLTKELAKASVSRIVI 57 MGQKV+P +RL I + + WF++ TK L + + ++ R + Sbjct: 1 MGQKVNPISLRLPINRSVDCLWFSDIHSTKLMIQYLHFHKYIESIFQ-VTSHLNMGRFFL 59 Query: 58 ERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVAD 93 + K ++ +I K ++K + Sbjct: 60 DVFPKKWTLSCLVHERKNLISKGTRFLKKSAFFNKN 95 >UniRef50_Q5PX34 Ribosomal protein S3 (Fragment) n=73 Tax=Halimeda RepID=Q5PX34_9CHLO Length = 181 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 26/181 (14%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G R+GI +P S W+A+ + ++ + D +R L K+ +A+ S+I I R Sbjct: 1 MGQKVHPLGFRVGITQPHLSQWYASKRYYSQYVLEDNFIRTILLKKYKRANFSKIHISRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKK-------------GEDVEKLRKVVADIAGVPAQINIAEV 106 + IH GI+IG K + +++ + + Sbjct: 61 TDDHFEIVIHAQNLGILIGTKSEKSEKSEKFKLFQKQIKEFIFHYRQSEWNSKLRVVLHI 120 Query: 107 RKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGA------------KGIKVEVS 154 + + A +AD I LERRV ++ ++ R G+K+++S Sbjct: 121 FRCKTSASSIADFIVEHLERRVPYKVVFNLLKKHLQRQERQERQEHFDSALGIGMKIQIS 180 Query: 155 G 155 G Sbjct: 181 G 181 >UniRef50_Q9NQS8 Ribosomal protein S3 (Fragment) n=70 Tax=Eukaryota RepID=Q9NQS8_HUMAN Length = 158 Score = 113 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 6/125 (4%) Query: 101 INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA 160 + +V L A A+S+ +L + RRA ++ M GAKG +V VSG+L G Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 59 Query: 161 EIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE 218 + A++ + +G + + +D GV+G+KV I + P+ Sbjct: 60 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM---LPWDPTGKIGPK 116 Query: 219 KPAAQ 223 KP Sbjct: 117 KPLPD 121 >UniRef50_Q5PSC9 Ribosomal protein S3 (Fragment) n=20 Tax=Halimeda RepID=Q5PSC9_9CHLO Length = 291 Score = 113 bits (283), Expect = 4e-24, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 1/99 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI +P S W+A+ K ++ + D +R L K+ AKA +I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 AKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP 98 ++ + + + +P ++IGKKGE+++ +K + + Sbjct: 61 IENHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFKY 99 >UniRef50_D0VMX7 Ribosomal protein S3 n=1 Tax=Volvox carteri f. nagariensis RepID=D0VMX7_VOLCA Length = 742 Score = 113 bits (283), Expect = 5e-24, Method: Composition-based stats. Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 5/128 (3%) Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELD----AKLVADSITSQLERRVMFRRAMKRAV 138 +E RK+ + +I+I D A +VADSI LE+R FR +K+A Sbjct: 610 QIENQRKMYKANLALIPKISIKFFSVKTTDILEKASIVADSIVDALEKRKAFRGVIKKAK 669 Query: 139 QNAMRLG-AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 197 ++ MR KG+K++VSGRL GAEIAR+EW R GRVPL TLRA+IDY+ A+T YG+IG Sbjct: 670 EDLMRRRRVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANIDYSYRTANTIYGIIG 729 Query: 198 VKVWIFKG 205 VKVWIFKG Sbjct: 730 VKVWIFKG 737 Score = 59.2 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 25/127 (19%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKE--FADNLDSDFKVRQYLTKELAK--------- 49 MGQKVHP G R+GI K S WFA ++ ++ ++ D +R+ L + Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYGYSQSVFEDHMLRKTLLNLFSNLEKENALAT 60 Query: 50 -------------ASVSRIVIERPAKSIRVTIHTARPGIV-IGKKGEDVEKLRKVVADIA 95 A +++I IER + I + I K ++++ +V+ + Sbjct: 61 KQSKKSGATQAKLAKITQIKIERGLIPYEIGIQIHSDDCLYITKAIDNIKISSGLVSKLQ 120 Query: 96 GVPAQIN 102 + Sbjct: 121 KTRKYLF 127 >UniRef50_D2DX78 Ribosomal protein S3 n=2 Tax=Araucariaceae RepID=D2DX78_ARAHE Length = 731 Score = 113 bits (283), Expect = 5e-24, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLER--RVMFRRAMKRAVQ 139 +V K+R +++D I ++ A L+A + L+ + FR + V+ Sbjct: 603 NEVRKMRSLLSDGTNTNTFIAPVKIESVFQSASLIAQDTSFLLKSNIKRSFRSIFNQIVR 662 Query: 140 NAMR---LGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVI 196 + + +GI++ SGRL GA+IARTE + + + IDY ++ T YG++ Sbjct: 663 SIPKVTRERVRGIRIRCSGRLKGAKIARTEHRKYRKPSCNAFGRKIDYAYAKVFTRYGIL 722 Query: 197 GVKVWIF 203 GVKVWI Sbjct: 723 GVKVWIS 729 Score = 59.6 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYL------TKELAKASVSR 54 M +K +P +RL + +S WF++ + + D R Y T++ + + Sbjct: 1 MARKANPISVRLHPNRSSDSNWFSD-NYYGKLVYQDVNSRDYFGSIRPPTRKTFGFRLGK 59 Query: 55 IVIERPAKSIRVTIH 69 ++ K + + Sbjct: 60 CILHHSPKRTFIHLF 74 >UniRef50_Q5PXB8 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda cuneata RepID=Q5PXB8_9CHLO Length = 160 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 84/160 (52%), Gaps = 5/160 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G RLGI +P+ S W+A+ K+++ + D +R L K+ +A +I I R Sbjct: 1 MGQKVHPLGFRLGITQPYLSNWYASKKDYSKYVLEDHLIRTLLFKKYNRAKFDKITIFRN 60 Query: 61 A-KSIRVTIHTARPGIVIGKKGED--VEKLRKVVADIAGVPAQINIA-EVRKPELDAKL- 115 + + I+ +P I++G G ++++ + +++ + + +++A Sbjct: 61 IEDHVEIFIYAQKPEILLGTTGARQLQKQIKTSIFQHRKRNSRLKVILSIFCCKINASSA 120 Query: 116 VADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSG 155 +AD I LERR+ ++ + + R G+KV++SG Sbjct: 121 IADFIVEHLERRIPYKVVLTLLKKYLKRNKPLGMKVKISG 160 >UniRef50_C5KMP5 40S ribosomal protein S3, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5KMP5_9ALVE Length = 244 Score = 112 bits (281), Expect = 8e-24, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 11/169 (6%) Query: 68 IHTARPGIVIGKKGEDVEKLRKVVADIAGVP---AQINIAEVRKPELDAKLVADSITSQL 124 +H V+G+KG + +L +V P ++ V L A+ A+S+ +L Sbjct: 40 LHDYGIRKVLGEKGRRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKL 99 Query: 125 ERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLR---AD 181 + RRA ++ M GAKG++V VSG+L A+ A+ + +G + L T Sbjct: 100 LGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEMY 157 Query: 182 IDYNTSEAHTTYGVIGVKVWIFK---GEILGGMAAVEQPEKPAAQPKKQ 227 +D G++G++V I E G + +PK+ Sbjct: 158 VDQAIRNVDMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKED 206 >UniRef50_A6YGC6 30S ribosomal protein S3, chloroplastic n=1 Tax=Leptosira terrestris RepID=A6YGC6_LEPTE Length = 325 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 38/190 (20%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKVHP G R+GI K S WF+N+K++ ++ D+ +R + K A +S I I+R Sbjct: 1 MGQKVHPLGFRVGITKKHRSLWFSNSKQYPQSVLEDYVIRNNILKTFPSAEISEIHIQRT 60 Query: 61 -------AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP--------------- 98 + + I++ +P ++G K E + KLRK++ + Sbjct: 61 HHDIESSPNGLIIIIYSKKPNQLVGNKHEKLHKLRKILKQKLTLNRSLIKPKGQVFLNSS 120 Query: 99 ----------------AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 + + E+ P A + ++I QL+ R +R +K+ + Sbjct: 121 WRDFSKILLQKQKTDRIKFLVREITTPYSSAFCIGNAIVQQLQDRQRYRFVIKKVIAEVK 180 Query: 143 RLGAKGIKVE 152 + + +K Sbjct: 181 KERKENLKTI 190 Score = 93.5 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 20/205 (9%) Query: 19 NSTWFANTKEFADNLDSDFK-------VRQYLTKELAKASVSRIVIERPAKSIRVTIHTA 71 NS+W ++F+ L K VR+ T + + ++++ R Sbjct: 118 NSSW----RDFSKILLQKQKTDRIKFLVREITTPYSSAFCIGNAIVQQLQDRQRYRFVIK 173 Query: 72 R-PGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMF 130 + V ++ E+++ ++ + +I E A+ + S + Sbjct: 174 KVIAEVKKERKENLKTIQPTNTNKVITSREIPTMEFPAALEKAQNPLEYNLSAFNQ---- 229 Query: 131 RRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAH 190 + +++ ++ KG+K++++GRL GAEIARTEW+R+GRVPLHTL+ADIDY+ +A+ Sbjct: 230 ----SKQDKSSYQVPIKGLKIQLAGRLNGAEIARTEWFRKGRVPLHTLKADIDYSYQKAY 285 Query: 191 TTYGVIGVKVWIFKGEILGGMAAVE 215 T YG+IGVKVW+F G G + Sbjct: 286 TKYGIIGVKVWVFNGIKTGKYQYAK 310 >UniRef50_Q74MZ4 30S ribosomal protein S3P n=1 Tax=Nanoarchaeum equitans RepID=RS3_NANEQ Length = 230 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 6/183 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEK 86 ++F N ++++ L A+VS+++I + RV I++ARP ++ ++ + K Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEERKAHLAK 66 Query: 87 LRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV-MFRRAMKRAVQNAMRLG 145 L ++ I + + P LDA ++A+ + +ER + +RR +R ++ M G Sbjct: 67 LLEL--KFGLEKPVIEVLPIENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIMNAG 124 Query: 146 AKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA--DIDYNTSEAHTTYGVIGVKVWIF 203 A G ++ ++GRL G + +T ++ G + ++D + A+ GV G+ V I Sbjct: 125 AIGAEIVIAGRLSG-QRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVTIL 183 Query: 204 KGE 206 K + Sbjct: 184 KPD 186 >UniRef50_Q9G8W8 Ribosomal protein S3 n=1 Tax=Rhodomonas salina RepID=Q9G8W8_RHDSA Length = 202 Score = 110 bits (274), Expect = 5e-23, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 93/203 (45%), Gaps = 8/203 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT-KELAKASVSRIVIER 59 M ++ + N +RL + K W S WF+ ++ L +D + +Y K S+ ++ I R Sbjct: 1 MTKRSNTNNLRLMLNKDWVSNWFSEKSQYPIFLQNDLIIYKYFFWHYYFKESLLKMRIIR 60 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADS 119 ++ I + + ++ K KL + + + + + ++ +A Sbjct: 61 FSRKIILFFLISYDRKIMLKDF----KLNLNTFLFKAKNIFLVLYKNKFFKSNSFYIAKK 116 Query: 120 ITSQLERRVMFRR-AMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTL 178 I + +E +V FR +K+ + +A K + V GR+ G E+A+ ++ +G +P Sbjct: 117 IATLIENKVRFRSTVVKKLLNDAKL--VKSLLVVCKGRINGVEMAKKDFLVKGSIPFQKF 174 Query: 179 RADIDYNTSEAHTTYGVIGVKVW 201 ++++ A+T G + VKVW Sbjct: 175 HVKLNFSQVIANTLKGSVIVKVW 197 >UniRef50_O99993 Ribosomal protein S3 n=1 Tax=Porphyra purpurea RepID=O99993_PORPU Length = 227 Score = 108 bits (270), Expect = 1e-22, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 22/228 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNS---TWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVI 57 MGQKV+P G R+G+ W+ + + K + L + +L + + R + Sbjct: 1 MGQKVNPKGFRIGLSNLWHDEGQCYGKSFKNPKNLLKETRNIFTFLNQYFESKKLVRGQV 60 Query: 58 ERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVA 117 E+ + ++ ++ + ++ K + Q+ + L+ Sbjct: 61 EQKVFN-KLKKYSIQYVPILPKSTPSICNTATKTTYAFKKNIQVRNYNATLWYQNGPLLC 119 Query: 118 DSITSQLERRVMFRRAMKRA-------------VQNAMRLGAK---GIKVEVSGRLGG-- 159 + I L++ + FR+ + ++ + G+KV +GR GG Sbjct: 120 EFIKVSLKKGIAFRKIINTIQQLLVLKTPHKIVLKTSFGTNIMEYTGLKVRYTGRFGGSR 179 Query: 160 AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEI 207 + +A + G V L + I + +S HT G+ ++VW+ I Sbjct: 180 SRMASSIVCLIGAVSLQKIETHIQFYSSSLHTKQGLCNLQVWMAYKTI 227 >UniRef50_P48938 Ribosomal protein S3, mitochondrial n=1 Tax=Chondrus crispus RepID=RT03_CHOCR Length = 240 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 87/225 (38%), Gaps = 22/225 (9%) Query: 1 MGQKVHPNGIRLGIVKPWNS---TWFANTKEFADNLDSDFKVRQYLTKELAKAS--VSRI 55 M QK++P RLG + WNS + + K + +++ ++ ++ + + ++ Sbjct: 1 MAQKINPISFRLGTTQVWNSTLQIYGKSFKNYFSIVNNQLNLQNFIIRYVKLNGFQINYY 60 Query: 56 VIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKL 115 + ++I+ + + ++L ++++ + K L + Sbjct: 61 EWKMHKNKTFLSIYFSPSFNNGKLNLTNFKQLSNLLSNWCSNKFIFHFYLNSKWSLTSNF 120 Query: 116 VADSITSQLERRVMFRRAMKRAVQNAM----------------RLGAKGIKVEVSGRLGG 159 + +E+++ ++ + G K+ + GR Sbjct: 121 LTLYTKYLVEQKLGPKKIIVILCNFLQDQLNSSKVMHFKFGFIETKLVGFKIRLVGRFDS 180 Query: 160 A-EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 + ++A++ G + L L + ++Y+ E HT G GV+VW+F Sbjct: 181 SNQMAKSFDQTIGTLSLTNLSSFVEYSNIEIHTKLGTCGVQVWLF 225 >UniRef50_Q2EEW0 Plastid 30S ribosomal protein S3 n=1 Tax=Helicosporidium sp. ex Simulium jonesi RepID=RR3_HELSJ Length = 241 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 99/235 (42%), Gaps = 36/235 (15%) Query: 8 NGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP------- 60 G+RLG K W + + ++ + + + + I + Sbjct: 8 IGLRLGYNKTHKLIWSLSKNN-PIFIQTNHFLEYIIKNDPFFCGLILIDFQLMQYIVVHK 66 Query: 61 -------------AKSIRVT--------IHTARPGIVIGKK------GEDVEKLRKVVAD 93 SI + I + + I ++ + + K++ + Sbjct: 67 NQLGNFSPLKNNLPNSINLFLKLKIATEIQSNFNSVFILEERLHFLFFKYLNKMKN-LKM 125 Query: 94 IAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEV 153 + + ++ I + P L+ + + + L + + RRA+ + N ++ GA+G+K+++ Sbjct: 126 LNNLKIKVKIKFLNNPILEPQWIFYKLHQDLYKGINIRRALAKISSNVIKKGAEGVKIQI 185 Query: 154 SGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 GR+ G + A +G++PL L ++I+Y + T YG++GVK+W+FKG +L Sbjct: 186 KGRINGVDKATVIVEEKGKMPLQNLSSEINYYSRALKTVYGLLGVKIWVFKGFLL 240 >UniRef50_D2DXE7 Ribosomal protein S3 (Fragment) n=1 Tax=Welwitschia mirabilis RepID=D2DXE7_WELMI Length = 744 Score = 107 bits (267), Expect = 3e-22, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 14/136 (10%) Query: 86 KLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR---VMFRRAMKRAVQNAM 142 K +++ + I ++ A L+A I++QL R FR + V+ Sbjct: 601 KRVQMLCNRTNTSYFIGSVKIPYNYQSASLIAQDISNQLRGRNRTRSFRSLVSYLVRFVP 660 Query: 143 -------RLGAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRAD--IDYNTSEAHT 191 + +GI++ SGRL GAEIA TE G+ P R + ID+ + T Sbjct: 661 VRVNPSASVRVRGIRICCSGRLKGAEIAYTECGEYGKTSAPSSIYRREGVIDHASVHVST 720 Query: 192 TYGVIGVKVWIFKGEI 207 YG+ GVKVWI + Sbjct: 721 RYGIYGVKVWISYSSV 736 >UniRef50_C1KRI4 Ribosomal protein S3 n=1 Tax=Micromonas sp. RCC299 RepID=C1KRI4_9CHLO Length = 319 Score = 106 bits (266), Expect = 5e-22, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE--RRVMFRRAMKRAVQ 139 + V + V+A +++ A VA I Q E ++ FR + ++ Sbjct: 192 KYVSHIENVLALYTQKKVVWTPYKIKNAFTSASFVAHYIALQFEQNKKKPFRSIFQDVLK 251 Query: 140 NAMRL-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGV 198 ++ GI++ ++GR+GGAE+AR E + G+ LH IDY+ + A+T +G++GV Sbjct: 252 QCVKTPQLVGIRIAIAGRIGGAEMARVEQTQYGQTSLHVFSHTIDYHATSAYTPHGLLGV 311 Query: 199 KVWIF 203 KVW+ Sbjct: 312 KVWMS 316 Score = 48.0 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 41/107 (38%), Gaps = 3/107 (2%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS--VSRIVIE 58 M QK+ P +RL K ++++WF++ + + L +++++ + ++ Sbjct: 1 MAQKIAPAALRLYTNKKFDASWFSD-RMYGSLLQKTLNIKKFVHSIFESIGTKTALSHVQ 59 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAE 105 + I + P ++ + + L + A + E Sbjct: 60 ANPQHIYIQSFFCSPRVMNQRLRKKYVALESNTQFLHPFEAYLTAKE 106 >UniRef50_A4KYC4 Ribosomal protein S3 (Fragment) n=3 Tax=Chrysobalanaceae RepID=A4KYC4_9ROSI Length = 389 Score = 106 bits (265), Expect = 6e-22, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Query: 79 KKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-RRVMFRRAMKRA 137 ++++K+R ++++ I +++ A +A I+ QL +R FR + Sbjct: 270 SYLKEMKKMRSLLSNRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKI 329 Query: 138 VQNA---MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYG 194 V++ M+ G +GI++ SGRL GAEIARTE + G+ + IDY +E T YG Sbjct: 330 VKDIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 389 >UniRef50_C1KR88 Ribosomal protein S3 n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1KR88_9CHLO Length = 310 Score = 106 bits (264), Expect = 7e-22, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 6/141 (4%) Query: 70 TARPGIVIGKK---GEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE- 125 ++R +V G K + V + +++ G + +++ A VA + Q E Sbjct: 168 SSRVFLVKGSKALVSDYVPHVEAILSKTTGTQVVWEVYKMKHVFSSASFVAHYMAIQFET 227 Query: 126 -RRVMFRRAMKRAV-QNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADID 183 R+ FR + V + G++V ++GR+ A A T+ + G+ LH ID Sbjct: 228 QRKKPFRAIFEDVVSKCIKHAHIVGVRVVIAGRIRNAAKASTQMAKYGQTSLHVFSHAID 287 Query: 184 YNTSEAHTTYGVIGVKVWIFK 204 Y ++ AH+ G++G+KVW+ Sbjct: 288 YASTSAHSKNGLLGIKVWLSY 308 Score = 42.3 bits (98), Expect = 0.012, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 M QK+ P +RL K + W + + + L + ++ + + + + + Sbjct: 1 MAQKIGPASLRLWTNKEVHGLWMGSV-TYTELLHTGERIHTFCERLFRQLGLRGSMTHVQ 59 Query: 61 AKSIRVTIHTARPG 74 A + R+ I + P Sbjct: 60 ASNHRLLIQSFVPK 73 >UniRef50_Q6E789 Ribosomal protein S3 n=1 Tax=Saprolegnia ferax RepID=Q6E789_SAPFE Length = 296 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 47/253 (18%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIE-- 58 MGQK+ P +RL K W+S W K +A+ L D ++R+Y+ L +S + I+ Sbjct: 1 MGQKIIPISLRLKNRKNWHSQWIVEKKNYAEILHFDLELRKYIETLLNNKKISTLQIKIN 60 Query: 59 --RPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQ---------------- 100 I V +H ++ K+ + L + + + Sbjct: 61 KVSKNLYIYVFVHNTFKKEILKKQSNILFHLNSYLNNKYNIKLFFLKAHFKLNNYQKNLR 120 Query: 101 ----------------------INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAV 138 ++I ++ +++ I ++++ + R + Sbjct: 121 FYIYKYLKKKRRRLKDKKILKFLSICQIAFTLGKMNIISKYIVRTIKKKKIHRGYLNFIN 180 Query: 139 Q-----NAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTY 193 + M G K++V GR+ GA+ R Y+EGR+PL +L +I Y E T Sbjct: 181 RILKEYFKMNSKILGYKLQVKGRVNGAKRKRKLVYQEGRIPLSSLDKNIQYTFDEFITKS 240 Query: 194 GVIGVKVWIFKGE 206 GV VK+W + + Sbjct: 241 GVCSVKMWFYLKD 253 >UniRef50_D2EEG8 KH type 2 domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEG8_9EURY Length = 223 Score = 104 bits (260), Expect = 2e-21, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 9/187 (4%) Query: 26 TKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 K+ N +D R+YL K+ ++ +S I IE+ +++ I T +PG +I + + + Sbjct: 3 PKKIVANRVNDETAREYLFKKFSRFGISDIRIEKTPLGMKIVIKTPKPGAIITRANQILR 62 Query: 86 KLRKVVADIAGVP-AQINIAEVRKPELDAKLVADSITSQLERRVM--FRRAMKRAVQNAM 142 + K + + +I + + P LD +VADSI ++ + ++ +A+ + M Sbjct: 63 ESSKELGEYFNQESPRIEVEGSQDPNLDPAIVADSIAFKIAKYGPMKYKVVAHKAMDSIM 122 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYR-EGRVPLHTLRAD---IDYNTSEAHTTYGVIGV 198 GA+G+++E+ G + E A +R G V T + + + + G IG+ Sbjct: 123 SAGARGVEIEIGGVIK--ERAAHFKFRPTGSVMPKTGQVEFFGVRSAKKQLVLKRGSIGI 180 Query: 199 KVWIFKG 205 KV I Sbjct: 181 KVTIVVP 187 >UniRef50_P46740 Ribosomal protein S3, mitochondrial n=1 Tax=Prototheca wickerhamii RepID=RT03_PROWI Length = 500 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 5/141 (3%) Query: 68 IHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERR 127 I +V + + + ++ + +Q+ ++ A +AD I +ERR Sbjct: 358 ILGNSKSLVSRNQFKYKNYIENFLSSQYNIDSQLFPFISKQNWQSAGFIADEIVYFIERR 417 Query: 128 VMFRRAMKRAVQNA-MRLGAKGIKVEVSGRLGG----AEIARTEWYREGRVPLHTLRADI 182 V F R R ++ A M+ +GI++ SGR+GG A+ A E + G LH I Sbjct: 418 VSFSRIKNRILRQASMQSYVRGIRITCSGRVGGKSKKAQRATQECVKYGETSLHVFECKI 477 Query: 183 DYNTSEAHTTYGVIGVKVWIF 203 D+ + A+T++G++G+KVWI Sbjct: 478 DFASRIANTSFGLVGIKVWIC 498 Score = 54.6 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Query: 1 MGQKVHPNGIRL-GIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASV--SRIVI 57 MGQK +P +RL + + ++S W+++ +A D + Y+ + +R+ + Sbjct: 1 MGQKTNPISLRLQNVNRNFDSCWYSD-YFYAKCFSRDLYLNNYINTFFKLYRLPQARVCV 59 Query: 58 ERPAKSIRVTIHTARPG 74 ++I+V P Sbjct: 60 NFGIQNIKVYPFFCIPK 76 >UniRef50_B7XK37 SSU ribosomal protein S3P n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XK37_ENTBH Length = 214 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 81/204 (39%), Gaps = 9/204 (4%) Query: 28 EFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL 87 + ++ + K K + + I ++ I++ I P ++ KK ++L Sbjct: 8 QIIKEGKIKAELDELFGKLFQKETYAGIELKMNQTPIQIFIKVLNPAELLEKKPMIQKQL 67 Query: 88 RKVVADIAGV---PAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRL 144 + ++A + +I ++ L+ A+ + ++R + +++ + Sbjct: 68 QNMIAQRLNMIPEHIRIVFEKIIDKALEPAYHAELLRQAFINVQPYKRTINSIIRSVRQA 127 Query: 145 GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTYGVIGVKVWI 202 G +G+ + VSG++ G + A+ + +G + A I + A GVIG+++ I Sbjct: 128 GGQGVCIRVSGKIKG-QRAKATKFIDGLLIQAGQPAKEYIRKAKAIALCKQGVIGIQISI 186 Query: 203 FKGEILGGMAAVEQPEKPAAQPKK 226 + + P + A K Sbjct: 187 M---LPYDSEGIRGPSELIADKIK 207 >UniRef50_A4ZHA7 Ribosomal protein S3 n=8 Tax=Phytophthora RepID=A4ZHA7_9STRA Length = 276 Score = 98.9 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 94/247 (38%), Gaps = 44/247 (17%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTK--ELAKASVSRIVIE 58 MGQK+ P +RL K WNS W N E+++ L D ++++Y + + I Sbjct: 1 MGQKIIPISLRLDKKKNWNSKWIVNNDEYSNLLHFDLEIKKYFENIFNYKNLKLIDLNIV 60 Query: 59 RPAKSIRVTIHTARPGIVIGKKGEDV---------------------------------- 84 + + +I V ++ + K + Sbjct: 61 KTSNNINVYVYIQKNSKKYYKLSYNKIINHLNLYFLNHNIKLFIKNVQFFEFIKLRRNLK 120 Query: 85 ---EKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNA 141 +K++K V I + ++ I LER+ ++ + Sbjct: 121 KIFDKIKKNNRINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINNIDNML 180 Query: 142 -----MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVI 196 M G +++ GRL ++ + +++G++PL+TL DI Y+ +E T G+ Sbjct: 181 QEFFKMFSNFVGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGIC 240 Query: 197 GVKVWIF 203 +K+W+F Sbjct: 241 SIKLWVF 247 >UniRef50_Q5EM32 Ribosomal protein S3 n=1 Tax=Mortierella verticillata RepID=Q5EM32_9FUNG Length = 283 Score = 91.2 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 82/259 (31%), Gaps = 57/259 (22%) Query: 1 MGQKVHPNGIRLGIVKPW--NSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIE 58 MG K HP +RL W S +F + E + D + A +S+ Sbjct: 1 MGSK-HPLSLRLKTHNKWGETSYYFNSKSELHNYWGVDKIALNVIKHYFQFALISKPKFN 59 Query: 59 RPAKSIRVTIH----------------------------TARPGIVIGKKGEDVEKLRKV 90 + + I ++ + TA ++ + + KL Sbjct: 60 KDSNKIVISFYYFLNLPVSKRFNPYGQSKRIQSSLQGDVTANNKNLLPLEAKGYSKLILK 119 Query: 91 VADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV---------------------- 128 ++ G P ++ + P L++ ++A I + Sbjct: 120 LSRFYGKPVELRPVRIHYPYLNSYILAQYIAINIRLGNFNKLMRTLFKKAKLVRNNNINT 179 Query: 129 -MFRRAMKRAVQNAMRLGAKGIKVEVSGRL---GGAEIARTEWYREGRVPLHTLRADIDY 184 FR +K + G+K+++SGRL A R G + L + + ID Sbjct: 180 TNFRDLIKYSSLINRPQFLSGLKIQISGRLSQRKAASRTRIVRKSIGTLRLSSSTSLIDA 239 Query: 185 NTSEAHTTYGVIGVKVWIF 203 + G VKVW+ Sbjct: 240 SKFSFKGKNGAATVKVWLS 258 >UniRef50_Q7YN77 Ribosomal protein S3 n=1 Tax=Eimeria tenella RepID=Q7YN77_EIMTE Length = 203 Score = 86.2 bits (212), Expect = 8e-16, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 85/205 (41%), Gaps = 7/205 (3%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MGQKV+P R + + W + N+ ++ + + + ++ I + Sbjct: 1 MGQKVNPLIFRSKNFPYYINIWNNFKLTYI-NIKFFLNLQLFTKNK-KQLNILYIQNKYY 58 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEK--LRKVVADIAGVPAQ-INIAEVRKPELDAKLVA 117 + + ++ K + + K ++ + + N ++ P + + Sbjct: 59 YNNYYIYNIILYSKLIYLKNKQYINKYFIKFIQKNYLKKNKFTFNFVVLKHPLISTYFIL 118 Query: 118 DSITSQ-LERRVMFRRAMKRAVQNA-MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPL 175 + ++ L + R+ + + + + KG K +SG++ G+++A+ E ++ L Sbjct: 119 KYLYNKILYTKNSLRKIIPQIILLINKKYKIKGFKCIISGKINGSQMAKIETFKFNESSL 178 Query: 176 HTLRADIDYNTSEAHTTYGVIGVKV 200 ++ YN+ + T YG++G+K+ Sbjct: 179 QNKILNVKYNSIDVITKYGLLGIKI 203 >UniRef50_A8J9X5 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J9X5_CHLRE Length = 1125 Score = 85.8 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 5/141 (3%) Query: 96 GVPAQINIAEVRKPELDAKLVADSITSQLERRVM---FRRAMKRAVQNAMRLGAKGIKVE 152 G A A + LE R A + ++VE Sbjct: 141 GQQVHFQPFVFNDIFQSAPAAATYVAEALESGSAWGRIERFFLAAAEADAGKLVAAVRVE 200 Query: 153 VSGRLGG-AEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI-FKGEILGG 210 V+GR+G A++A T+ + G + L +L + +DY T+ A+T GV+G+KVWI ++ Sbjct: 201 VAGRIGRKADMAATKSWAWGDLRLASLTSKLDYGTAAANTRMGVLGIKVWIRYQPAAAPD 260 Query: 211 MAAVEQPEKPAAQPKKQQRKG 231 + P Sbjct: 261 LYFPATGGSGLHAPLPAGAAP 281 >UniRef50_Q01BA3 Putative ribosomal protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01BA3_OSTTA Length = 145 Score = 85.0 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 6/108 (5%) Query: 130 FRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRV--PLHTLRADIDYNTS 187 R A ++ M GAKG +V VSG+L G + A+ +++G + + +R I T Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRG-QRAKAMKFKDGYMISSGNPVRDYIVSCTR 88 Query: 188 EAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKP---AAQPKKQQRKGR 232 A G IG++V I G P PK+ + + Sbjct: 89 HALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKEDEDMAK 136 >UniRef50_Q9G4C6 Ribosomal protein S3 n=1 Tax=Thraustochytrium aureum RepID=Q9G4C6_9STRA Length = 251 Score = 83.5 bits (205), Expect = 5e-15, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 20/186 (10%) Query: 37 FKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG 96 V YL +L + +++P K ++I G +G ++ ++ V+ + Sbjct: 81 LVVDFYLFVKLLCKYIEFFFLKKPIKIYLISIKPTSNGKFFRSRG--LKDIQDVLQILDN 138 Query: 97 VPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM-----RLGAKGIKV 151 P K + I +QLE+ ++ + Q KGIK+ Sbjct: 139 FPLH-------------KTLNFFICAQLEKENHHQKIIDTIFQQVKINFQFYTKVKGIKI 185 Query: 152 EVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGM 211 + GR+ G++ ++T G +PL++ A+I +N T +GV GVK++I Sbjct: 186 SIKGRVNGSDRSKTHLLELGSIPLNSFNANIFFNFQHVVTAFGVYGVKIYINYSNNFKNE 245 Query: 212 AAVEQP 217 + ++ Sbjct: 246 TSTKKY 251 >UniRef50_Q5ILK9 Ribosomal protein S3 n=2 Tax=Polysphondylium pallidum RepID=Q5ILK9_POLPA Length = 660 Score = 83.1 bits (204), Expect = 7e-15, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 79/211 (37%), Gaps = 11/211 (5%) Query: 34 DSDFKVRQYLTKELAKASVSR-IVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA 92 K+ + + A + I + + + + +V+ +K + K+ V + Sbjct: 443 QLILKITLNYIQNIKNAGQQKYIKVFKALIKFLLVPNGLTKDLVLKRKFKRANKIFFVYS 502 Query: 93 DIAGVPAQ---------INIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMR 143 + + IN + + ++A ++ I ++ + + ++ + Sbjct: 503 QLILYNIKQLIKTQQYTINFFGLIEENINADMLLKRILRTMDITKSLKWLILNMLRKLEK 562 Query: 144 L-GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 G KV+ +GRL + +AR + ++G + + + IDY YG G+KVW+ Sbjct: 563 SMSFFGFKVKFAGRLSASIMARVDIIQKGLISTNNMNVYIDYAKDSIVLKYGKCGIKVWL 622 Query: 203 FKGEILGGMAAVEQPEKPAAQPKKQQRKGRK 233 + ++ K + + + ++ Sbjct: 623 VRNLLVYMPYKYVYSYKFNNNKNEWKYQKKQ 653 >UniRef50_UPI00017EFAFD PREDICTED: hypothetical protein n=1 Tax=Sus scrofa RepID=UPI00017EFAFD Length = 127 Score = 81.2 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 142 MRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGVK 199 M GAKG +V VSG+L G + + + +G + + +D GV+G+K Sbjct: 1 MENGAKGCEVVVSGKLQG-QRTKAMKFVDGLMIHSGDPVNHYVDTALHHVLLREGVLGIK 59 Query: 200 VWIFKGEILGGMAAVEQPEKPAAQ 223 V I + P+KP ++ Sbjct: 60 VKIM---LPWDPMGKMGPKKPLSE 80 >UniRef50_B9GND7 Predicted protein n=2 Tax=rosids RepID=B9GND7_POPTR Length = 74 Score = 79.6 bits (195), Expect = 8e-14, Method: Composition-based stats. Identities = 36/73 (49%), Positives = 51/73 (69%) Query: 134 MKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTY 193 MK+A++ + +KGI+V+++ L G +IAR EW REGRVPL TLRA I+Y + T Y Sbjct: 1 MKKAIELTEQSNSKGIQVQIAKHLDGKKIARAEWVREGRVPLQTLRAKINYCSYTVRTIY 60 Query: 194 GVIGVKVWIFKGE 206 V+G+K+WIF E Sbjct: 61 RVLGIKIWIFIDE 73 >UniRef50_Q6VEE5 Ribosomal protein S3 n=1 Tax=Emiliania huxleyi RepID=Q6VEE5_EMIHU Length = 283 Score = 79.2 bits (194), Expect = 9e-14, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 97/283 (34%), Gaps = 77/283 (27%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQY------------------ 42 M QK +P RL + W + ++ ++F + +D ++R + Sbjct: 1 MSQKTNPILSRLNNRRSWLTINSSDNRQFNNLFFTDLQIRYFISVVSKFFSILSDKPLIK 60 Query: 43 ---LTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED---------------- 83 +++ + I++ ++++ I + + KK + Sbjct: 61 TYKFNSVFLRSNFTTIMLMGWPRALKKRIFSFNSRVSSYKKVRENHLNFAHFFGLTRFVL 120 Query: 84 ----VEKLRKVVADIAGVPAQINIAEVRKPEL---------DAKLVADSITSQL-----E 125 + L+K A + ++ + + A+++A+ I Q+ + Sbjct: 121 YDSVLRNLQKNRKQNASKKRKTSVLSKKIVKSTDFSLVRSNSAQIIANYIGWQIQASLKQ 180 Query: 126 RRVMFRRAMKRAVQNAMRLGAK--------------------GIKVEVSGRLGGAEIART 165 R F+ K+ + ++ K G+KV +GR + R Sbjct: 181 RDWNFQSNFKKGINKTIQSFLKRNVDQTVKSILSMKSKNPICGVKVICAGRWKKTKSGRK 240 Query: 166 EWYR--EGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGE 206 + + +G++ + + + +D+ +T +G KV + + Sbjct: 241 QKFTLYKGKLAMQSYSSFLDFGFYHGNTKFGSFSFKVLVAYNQ 283 >UniRef50_Q9MTE3 Ribosomal protein S3 n=1 Tax=Toxoplasma gondii RepID=Q9MTE3_TOXGO Length = 224 Score = 79.2 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 83/220 (37%), Gaps = 18/220 (8%) Query: 2 GQKVHPNGIRLGIVKPWNSTWF------ANTKEFADNLDSDFKVRQYLTKELAKASVSRI 55 GQ+V+ + +N+ W F + + + K L Sbjct: 3 GQRVNSLIFYSKLYSKYNNLWTIYLNSLNWNCYFLNIIKFINCLIYLKQKILLNNFNFFS 62 Query: 56 VIERPAKSIRVTIHTARPGIVIG-----KKGEDVEKLRKVVADIAGVP----AQINIAEV 106 + + + + + K+ +++++ K + ++ + IN + Sbjct: 63 LNNKYKFQLNINCIFYFYNYFLKLKIFIKEINNIKRIYKKIDNLNNLKQKYYIYINFLIL 122 Query: 107 RKPELDAKLVADSITSQLERRVMFRRAMKRA---VQNAMRLGAKGIKVEVSGRLGGAEIA 163 + P + + + ++ + R+ +K+ + N + KGIK+ VSG++ G IA Sbjct: 123 KNPFSSITYLFYYVIKKFKQTLSLRKILKQLSLLILNIKKTSIKGIKILVSGKINGVVIA 182 Query: 164 RTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 + E G + +I YN T +GV+G K WIF Sbjct: 183 KKETCNYGLNYFNKYVYNIKYNVFYLKTKFGVLGFKFWIF 222 >UniRef50_P46754 Ribosomal protein S3, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RT03_ACACA Length = 298 Score = 78.9 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 80/223 (35%), Gaps = 18/223 (8%) Query: 6 HPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIER---PAK 62 + + + I + F N K+ A L + K+ KA +++ Sbjct: 70 NNISLYVYIHDSFLDLLFFNLKKNARFLLIKRLFNKKFYKKYRKALRQNKQLKQGLFMLL 129 Query: 63 SIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQ----------INIAEVRKPELD 112 RV + +R + K + ++ + ++ + I I + K ++ Sbjct: 130 KKRVILRYSRKLFFLFIKNKILKIYWESFKTLSLFYLKRFSRSSFLSKIFIIGLSKMNVN 189 Query: 113 AKLVADSITSQLERR---VMFRRAMKRAVQNAMRLG--AKGIKVEVSGRLGGAEIARTEW 167 A ++++ +L + R + ++ M+ KG K+ SGR + W Sbjct: 190 ANIISEFFFIRLTQYYTIWEVLRNINFLFKSLMKKRKLVKGYKITCSGRFSRKQRTTYSW 249 Query: 168 YREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210 G + T+++ +DY+ Y +KVW+ G+ Sbjct: 250 KAFGSLAFSTVKSKLDYSYKTIALKYSSCTIKVWVRLGKKKSN 292 Score = 56.5 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 60/152 (39%), Gaps = 13/152 (8%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKEL------AKASVSR 54 MG ++P RL ++ WN+ WF+ + ++ ++ D + ++ K L A + Sbjct: 1 MGHIINPISYRLYNIRYWNNNWFSGSLNYSYLINQDILIDRFFRKFLTTHLDSTNAGIIF 60 Query: 55 I--VIERPAKSIRVTIHTARPGI----VIGKKGEDVEKLRKVVADIAGVPAQINIAEVRK 108 + I R +I + ++ + KK ++++ + + + ++ Sbjct: 61 VNLKIIRSFNNISLYVYIHDSFLDLLFFNLKKNARFLLIKRLFNKKFYKKYRKALRQNKQ 120 Query: 109 PELD-AKLVADSITSQLERRVMFRRAMKRAVQ 139 + L+ + + R++ F + ++ Sbjct: 121 LKQGLFMLLKKRVILRYSRKLFFLFIKNKILK 152 >UniRef50_UPI00005A35DE PREDICTED: similar to 40S ribosomal protein S3 n=1 Tax=Canis lupus familiaris RepID=UPI00005A35DE Length = 161 Score = 77.3 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 48/185 (25%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + ++F + ++ ++LT+ELA+ SR+ + + I T R V+G+K Sbjct: 6 SKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK--- 62 Query: 84 VEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVM-FRRAMKRAVQNAM 142 ++ FRR Sbjct: 63 -------------------------------------AGGCGNGLLWFRRGG----LAVQ 81 Query: 143 RLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRADIDYNTSEAHTTYGVIGVKV 200 GAKG + VSG+L G + A++ + + + + +D + GV+G K Sbjct: 82 ESGAKGYEAMVSGKLQG-QRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSKC 140 Query: 201 WIFKG 205 Sbjct: 141 RSCFP 145 >UniRef50_Q6UVR6 Ribosomal protein S3 n=1 Tax=Pseudendoclonium akinetum RepID=Q6UVR6_PSEAK Length = 525 Score = 76.2 bits (186), Expect = 8e-13, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Query: 146 AKGIKVEVSGRLGGAE-IARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 KG+++ SGRLGG + +A+T GRVPL TLR +D+ T G +GVKVWI Sbjct: 465 IKGLRITFSGRLGGKKGMAKTLTKTTGRVPLSTLREKVDFAKGVVQTKMGSLGVKVWICF 524 Query: 205 G 205 Sbjct: 525 N 525 >UniRef50_Q9ZZN7 30S ribosomal protein S3 n=1 Tax=Cyanidioschyzon merolae RepID=Q9ZZN7_CYAME Length = 282 Score = 75.8 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 54/151 (35%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 M K+ P RLG + W + W+ + +++ L + K+ +YL + L K + + Sbjct: 1 MSHKIRPENYRLGYLFDWKNDWYTHNINYSNFLIKNLKISEYLNRILYKNFLFLGDLTLK 60 Query: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 + +++V I K + + + + QIN + + + Sbjct: 61 SNALKVLISLTCYPCKDSYKNTNWDLINHLCQLYFQKSVQINYYYRHTLLEHPNFITNWL 120 Query: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKV 151 LE+ + + + + ++ Sbjct: 121 CFLLEKEYDLKIILNQVKNFIKKTQENEYQI 151 Score = 66.5 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 13/157 (8%) Query: 62 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKP--------ELDA 113 K + I + I K E+ ++ K + ++ + + Sbjct: 126 KEYDLKIILNQVKNFIKKTQENEYQINKKTQNFIRSKNFETTKKLIETKNFQANTSYRSS 185 Query: 114 KLVADSITSQLERRVMFRRAMKRAVQNAMRLGA---KGIKVEVSGRLGG--AEIARTEWY 168 + S S+ + + +G+K+ + GRL G +I+ E Sbjct: 186 NSLHSSTRSETYSGNYYCSHCINSYDRFFSTKIVLLRGLKIIIRGRLHGLQNQISTVESI 245 Query: 169 REGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 G VPL T +I Y+T + T YGV G++VWIF Sbjct: 246 EIGTVPLQTKEHEILYSTRDFVTKYGVYGIQVWIFYN 282 >UniRef50_Q3S286 Ribosomal protein S3 n=1 Tax=Thalassiosira pseudonana RepID=Q3S286_THAPS Length = 308 Score = 73.8 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 21/193 (10%) Query: 29 FADNLDSDFKVRQYLTKELAKASV---SRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE 85 + NL ++++ L ++ ++ I +++ + + I + Sbjct: 115 YKPNLKQTMMLQEFQDILLESLTIYTKGKVNIFVTMQNLNNQKNLSYNR--IKNWKTIFK 172 Query: 86 KLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-------------RRVMFRR 132 +L+K V + A + AKL+A+ I+ Q + + F Sbjct: 173 QLKKFVRNSFFKEAINILFVNITKRKSAKLLAEFISDQFKINQLKTDQMAISRKDNYFLG 232 Query: 133 AMKRAVQ---NAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEA 189 +K+ ++ NA G GIK+ + GR A A++ + G+ L + + IDY S A Sbjct: 233 FLKQTIKLLINAEVSGLTGIKIVIKGRFNRAPRAKSVTIQFGKFSLQSFDSKIDYFQSTA 292 Query: 190 HTTYGVIGVKVWI 202 +T G GVKVW+ Sbjct: 293 YTINGTFGVKVWM 305 >UniRef50_Q25809 Rps3 protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q25809_PLAF7 Length = 214 Score = 73.8 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 83/226 (36%), Gaps = 38/226 (16%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWF---ANTKEFADNLDSDFKVRQYLTKEL---------- 47 MGQKVHP R I K + + ++ + K + N+ + + + + Sbjct: 1 MGQKVHPLIFRGLIYKNYLNNFYINISKNKYYLINILLTYFIYYNMYRICNYKEDNYINI 60 Query: 48 -AKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVE----------KLRKVVADIAG 96 S+++ VI + I+ + ++ K++ V Sbjct: 61 NINFSINKFVITFFLYNKYYNIYNLKYIFILLNYFNYYYYNYYNYMCFLKIKYVNNINNI 120 Query: 97 VPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGR 156 I + KL+ D + + + ++ F KG+K++ SGR Sbjct: 121 NVIMYYIKKYYIKYKSLKLIFDYLYNNILKKNNF--------------NIKGLKIKFSGR 166 Query: 157 LGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 + + E Y G + L TL +I Y +T YG++ +K+W+ Sbjct: 167 FKNSLKTKIEIYIYGIISLSTLNNNIKYINDIINTKYGILSIKIWL 212 >UniRef50_Q23891 ORF1740 n=1 Tax=Dictyostelium discoideum RepID=Q23891_DICDI Length = 1740 Score = 71.5 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 74/209 (35%), Gaps = 19/209 (9%) Query: 24 ANTKEFADNLDSDFKVRQYLT--KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKG 81 + +K++ + ++ + + L KA++ + + I+ I ++I K+ Sbjct: 1525 SKSKKYIGVVKKTILIKVLIKVLRSLLKANILTKKEAKRRRKIKELIKIFLYPLLITKRQ 1584 Query: 82 EDVEKLRKVVADIA---------------GVPAQINIAEVRKPELDAKLVADSITSQLER 126 +LRK V IN + + A+ V + +LE Sbjct: 1585 IQKVRLRKKNKIYLLMAQIFLYNIKQLVVSVNYSINFFGIIGSSITAEYVVRRLKERLEL 1644 Query: 127 RVMFRRAM--KRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDY 184 A+ K + G KV+ SGRL G +A+ + G + + IDY Sbjct: 1645 TKRNGSALLLKVMAKLMRSQHVVGCKVKYSGRLTGNSMAQQKVESRGLIGNSNMNVYIDY 1704 Query: 185 NTSEAHTTYGVIGVKVWIFKGEILGGMAA 213 +G G+K+WI + + Sbjct: 1705 AQDNLVRKHGKCGLKLWIVRNLLTYMPYK 1733 >UniRef50_Q33766 Ribosomal protein S3 n=2 Tax=Blastocladiaceae RepID=Q33766_ALLMA Length = 241 Score = 71.5 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 79/231 (34%), Gaps = 32/231 (13%) Query: 17 PWNSTWFANTKEFADNLDSD-FKVRQYLTKELAKA-SVSRIVIERPAKSIRVTIHTARPG 74 W S + + + S + + ++ +S+I + ++ + Sbjct: 12 HWKSRNYISRRTEWKVSMSQCHFIYKLISSVNPLLWGISKIEYHSLSNG-KLKVIVTGMK 70 Query: 75 IVIGKKGEDVEKLRKV-----------VADIAGVPAQINIAEVRKPELDAKLVADSITSQ 123 I G + +R+ + + ++ + LD +L+A SI + Sbjct: 71 IFDGTLLRSLFNMRQQHLGNSLNPFLSLFNTHWTQIELLRQSLPYNYLDPELLARSIAGR 130 Query: 124 LERRVMFRRA------------------MKRAVQNAMRLGAKGIKVEVSGRLGGAEIART 165 + +F MK R GI++E+ G G +++ Sbjct: 131 KVSKGVFGDIPFWSPDGGNIKNATMFGPMKNPEILDSRHVITGIRIEIKGITGKMTMSKK 190 Query: 166 EWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQ 216 G + ++ + ID+ + + T G+IGVKVWI + A + + Sbjct: 191 VIKTFGTLRFNSSDSIIDFGEASSMTARGIIGVKVWIAYKTVEQNPAGLVK 241 >UniRef50_Q9AIN3 Ribosomal protein S3 (Fragment) n=2 Tax=Candidatus Carsonella ruddii RepID=Q9AIN3_CARRU Length = 150 Score = 71.5 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 10/157 (6%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 MG+K++P RLG ++S W+ K F+ L D +R+ + K ++ I I Sbjct: 1 MGKKINPIFFRLGKKTNYHSLWYCKKKNFSFFLKKDILLREIIKKFFFFIDLNNIDII-F 59 Query: 61 AKSIRVTIHTARPGIVIGKKGE---DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVA 117 A I + ++ ++ + + ++ K+ NI + ++ L+ Sbjct: 60 ANKIIINLYLNNFENILSIENYLDLLILEIYKIFKKNILFNLINNIFTINSKKISFYLIN 119 Query: 118 DSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154 ++++ + +K G K+++S Sbjct: 120 YINNKNSIKKIIKKECLK------YSDFLNGCKIQIS 150 >UniRef50_Q9TAJ2 Ribosomal protein S3 n=1 Tax=Cafeteria roenbergensis RepID=Q9TAJ2_CAFRO Length = 713 Score = 71.2 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 5/144 (3%) Query: 72 RPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFR 131 + +I ++G+ + + + +V ++ + S+ +R++ F Sbjct: 561 KNPFLIERRGKRKGPFLRDFVLLILIALLTRNFKVLLKFINYQT---KNMSKTKRQIPFI 617 Query: 132 RAMKRAVQNAMRL--GAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEA 189 R + R + N KG++++ GR ++ + G +PL ADI+Y +S Sbjct: 618 RFLMRLITNLAGSVVRVKGLRIQFKGRFDRWNRTKSLVFTSGNIPLQRKDADIEYGSSHG 677 Query: 190 HTTYGVIGVKVWIFKGEILGGMAA 213 GV G+++W++ G Sbjct: 678 LVKKGVYGIRLWVWYGRYYHKSYK 701 Score = 58.1 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 2 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVS--RIVIER 59 GQKV+P G R+G + W + W+ + + L+ ++ + + L + I Sbjct: 5 GQKVNPVGWRVGFYRKWKTLWYEESWNYGLMLNKTLRINELMQSFLLYKRLPALNCNIMV 64 Query: 60 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVA 92 + I + ++ V+K RK + Sbjct: 65 ANQGTEKFIILVYFYNLREEETSQVKKRRKRLR 97 >UniRef50_B0X1S2 Ribosomal protein S3 n=1 Tax=Culex quinquefasciatus RepID=B0X1S2_CULQU Length = 278 Score = 71.2 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 50/174 (28%) Query: 52 VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPEL 111 + + + + I T R V+G+KG + +L +V + Sbjct: 77 FLSVEVHVTSIRTEIIIMTTRTQKVLGEKGHHIRELTAIVQKLI---------------- 120 Query: 112 DAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREG 171 RRA + GAKG +V VSG+L G + A++ + +G Sbjct: 121 ----------------RDLRRAC-------LESGAKGSEVVVSGKLRG-QRAKSMKFVDG 156 Query: 172 RVPLHTL--RADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQ 223 V D T G G I + P++P + Sbjct: 157 MVIHSRDPCNEYSDTATRHILLRQG--G---KIM---LPWDPNGKIDPKEPLPE 202 >UniRef50_UPI0001855078 30S ribosomal protein S3 n=1 Tax=Helicobacter pylori HPKX_438_CA4C1 RepID=UPI0001855078 Length = 100 Score = 70.0 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 43/91 (47%), Positives = 61/91 (67%) Query: 35 SDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADI 94 D K+R++L KEL A VS IVIER AK +RVT+ ARPG++IGKKG D+EK+++ + + Sbjct: 5 EDNKIRKFLKKELYYAGVSEIVIERAAKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTL 64 Query: 95 AGVPAQINIAEVRKPELDAKLVADSITSQLE 125 INI EV++P+ DA+L S L+ Sbjct: 65 IKKEVSINIKEVKRPQADAQLALSFFLSPLK 95 >UniRef50_A7AXG9 Rps3 n=1 Tax=Babesia bovis RepID=A7AXG9_BABBO Length = 237 Score = 68.8 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 71/236 (30%), Gaps = 33/236 (13%) Query: 1 MGQKVHPNGIR------LGIVKPWNSTWFANTK-EFADNLDSDFKVRQYLTKELAKASVS 53 M + + P R I K + + K L K ++ Sbjct: 1 MTKSISPIIFRQNLFLNSTINKIHIKLYKTLNYLNYFKFFQLILNTIYMYKKTLKKIRIN 60 Query: 54 RIVIERPAKSIRVTIHTARPGI--VIGKKGE---------------DVEKLRKVVADIAG 96 R + + + GKK + + ++ Sbjct: 61 RKFLYFTCSYTDINNICLNICFYGLFGKKHKSSIIPSYMALYKFTSYLNYFLHHNLNVYN 120 Query: 97 VPAQINIAE--VRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK------G 148 I + V + + +S+ + + + + K G Sbjct: 121 RNLFIWVLIPCVVNTGRNKFYIMNSLKYCILKNTNHYSKIISLCNKILTYKFKNRISIHG 180 Query: 149 IKVEVSGR-LGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 IKV+ SG G E RT Y +G V + +++ +I+Y S +T G IG+K W+ Sbjct: 181 IKVKYSGCTHKGGEKKRTFAYSKGDVSICSVKENIEYINSSINTYKGTIGIKCWLV 236 >UniRef50_Q0H8Z0 Ribosomal protein S3, mitochondrial n=1 Tax=Ustilago maydis RepID=RT03_USTMA Length = 266 Score = 68.5 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 56/180 (31%), Gaps = 27/180 (15%) Query: 52 VSRIVIERPAKSIRVTIHTA----RPGIVIGKKGE------DVEKLRKVVADIAGVPAQI 101 +S+ + + + + +V + L +A + + Sbjct: 85 ISKPNFSHTNSKVTIQLFYYTASPKNHLVNTSNNDLTTVSSHFSDLSTTLAQLYQKEVHV 144 Query: 102 NIAEVRKPELDAKLVADSITSQ--LERRVMFRRAM---KRAVQNAMRLGAKGIKVEVSGR 156 + P L++ +++ + + F+ A+ + + GIKV+VSGR Sbjct: 145 IATRLYYPYLNSDILSQYLAHNGPSNTFMDFQEAILTNPSLHKTNLPAHISGIKVQVSGR 204 Query: 157 L---GGAEIARTEWYREGR---------VPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 L + Y G L IDY+ G VKVWI + Sbjct: 205 LVTETVIPRITVKSYLIGSFQRNSNNTANKLGDFVTSIDYSKFTTKNELGAFTVKVWICQ 264 >UniRef50_C1QG67 SSU ribosomal protein S3P n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QG67_9SPIR Length = 73 Score = 68.1 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 23/49 (46%), Positives = 33/49 (67%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAK 49 MGQKV P G+RLGI K W+S WF +++ +AD+L D +R+Y+ K Sbjct: 1 MGQKVSPIGLRLGINKTWSSKWFEDSRTYADSLHEDLSIRRYIMNYYYK 49 >UniRef50_D1HDP1 Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=2 Tax=rosids RepID=D1HDP1_VITVI Length = 576 Score = 68.1 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 + ++FA + + + LT+EL + S + + I + V+G+KG+ Sbjct: 1 MSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGEKGK 60 Query: 83 DVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAM 142 +++L ++ +A + AQ AK + + + + AV++ + Sbjct: 61 KIKELTSLLGGLAMLCAQR-----------AKSMKFKDGYLISSGQPVKDYIDLAVRHVL 109 Query: 143 RLGAKGIKVEV 153 R G GIKV++ Sbjct: 110 RQGVLGIKVKI 120 Score = 55.0 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Query: 160 AEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQP 217 A+ A++ +++G + ++ ID GV+G+KV I G ++ P Sbjct: 77 AQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQGVLGIKVKIMFNWDPKGKQSLTTP 135 Query: 218 EKPA 221 Sbjct: 136 LPDL 139 >UniRef50_B0X7L7 40S ribosomal protein S3 n=1 Tax=Culex quinquefasciatus RepID=B0X7L7_CULQU Length = 179 Score = 68.1 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 58/211 (27%), Gaps = 59/211 (27%) Query: 23 FANTKEFADNLDSDFKVRQYLTKE-------LAKASVSRIVIERPAKSIRVTIHTARPGI 75 A + + + V + + LA+ +S + + I + P Sbjct: 1 MAEKYKRQIIVQQNKTVCHFFLRSGSSFSAWLAEDGLSGVEVRVTPTRTEFIIMASAPRT 60 Query: 76 VIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMK 135 + + +L + Sbjct: 61 CSARSDHRIRELNA-------------------------------------------VIY 77 Query: 136 RAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGV 195 ++ M AKG +V VSG+L G + A++ + +G + D G Sbjct: 78 GVLRFIMESCAKGYEVVVSGKLRG-QRAKSMTFVDGMMIHSD-----DPCKEATPLRQGE 131 Query: 196 IGVKVWIFKGEILGGMAAVEQPEKPAAQPKK 226 +G++V I + P++ + + Sbjct: 132 LGIQVKIV---LPWDPNGNIGPKELLSDNVE 159 >UniRef50_UPI0001859BF7 MRP3 n=1 Tax=Cryptococcus neoformans var. grubii RepID=UPI0001859BF7 Length = 235 Score = 67.7 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 57/145 (39%), Gaps = 14/145 (9%) Query: 82 EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAV--- 138 + L +V++++ G ++ + ++ P L++ ++A I L+ F R + + Sbjct: 87 NTINALGEVLSNVWGQAVELRLVKLHYPYLNSDILAAFIMKNLDTD-RFERVINKIFGIT 145 Query: 139 ------QNAMRLGAKGIKVEVSGRLG---GAEIARTEWYREGRVPLHTLRADIDYNTSEA 189 ++ + GIK+ ++GRL + + G T R I++ + Sbjct: 146 TPVVSGESNLPSHIIGIKIRLAGRLVTEPSRPRMTVQSAQIGSFKNST-RTIIEFGQCSS 204 Query: 190 HTTYGVIGVKVWIFKGEILGGMAAV 214 G + V+VWI + Sbjct: 205 VNKKGALTVQVWISQRSTTPTHYIK 229 >UniRef50_UPI00016B245A 30S ribosomal protein S3 n=1 Tax=candidate division TM7 single-cell isolate TM7b RepID=UPI00016B245A Length = 118 Score = 67.3 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 17/115 (14%) Query: 91 VADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIK 150 + ++ QINI EVRKPELDA +V +I Q+E +V +RRA+K A+ N MR GA+GIK Sbjct: 1 MKNLFNKEIQINIFEVRKPELDANIVGMNIARQVEGKVAYRRAIKMAIANTMRAGAEGIK 60 Query: 151 VE--------------VSGRLGGAEIAR--TEWY-REGRVPLHTLRADIDYNTSE 188 + V+ I R + W+ RE P TL I N Sbjct: 61 FKEDTPWRNWSNPASRVTFSFTHTHICRFTSNWFVREYSNPDLTLTIHITINCYT 115 >UniRef50_Q9MG96 Ribosomal protein S3 n=1 Tax=Chrysodidymus synuroideus RepID=Q9MG96_9STRA Length = 265 Score = 66.9 bits (162), Expect = 4e-10, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 11/114 (9%) Query: 89 KVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKG 148 ++ INI + + + +A + ++N G Sbjct: 159 SLIKLNLFTYILINIFKRLHKKKHTRFIAF-----------IKIICSFLIKNKFSNNILG 207 Query: 149 IKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWI 202 IK+ ++G+L G + T +G +P TL+ ID+N ++ T YGV G+K+W+ Sbjct: 208 IKIVLNGKLRGKVRSNTIIISKGSIPNQTLKKRIDFNQADIFTKYGVYGIKIWV 261 >UniRef50_B2VQ35 Ribosomal protein S3 n=3 Tax=Dictyostelium citrinum RepID=B2VQ35_DICCI Length = 1775 Score = 66.9 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 82/235 (34%), Gaps = 31/235 (13%) Query: 6 HPNGIRLGIVKPWNSTWF----ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPA 61 + +RL I+ + + +K++ + ++ + K L ++I ++ A Sbjct: 1536 NQLAVRLKILGKHLKRFTKGITSQSKKYIGAVKKTILIKVLI-KVLRSLLQTQIRTKKDA 1594 Query: 62 KS---IRVTIHTARPGIVIGKKGEDVEKLRKVVADI---------------AGVPAQINI 103 K I+ I ++I K+ +LRK V IN Sbjct: 1595 KRRRKIKEIIKIFLYPLLINKRQIQKVRLRKKNKIYLLMAQIFLYNVKQLVTSVNYSINF 1654 Query: 104 AEVRKPELDAKLVADSITSQL-----ERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLG 158 + + A+ V + +L K+ ++ G K++ SGR+ Sbjct: 1655 FGITGSSITAEYVLRRLRERLMTCHKHGGWFLTSIQKKLMR---SKHVVGFKLKFSGRIT 1711 Query: 159 GAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAA 213 G +A+ ++G + + ID+ +G G+K+WI + + Sbjct: 1712 GNSMAQKNIIKKGIIGNSNMNVYIDFAQDNIVRKHGKCGLKLWIVRNLLTYMPYK 1766 >UniRef50_Q8LNX7 Putative ribosomal protein S3 (Fragment) n=1 Tax=Zinnia violacea RepID=Q8LNX7_ZINEL Length = 143 Score = 66.9 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 5/66 (7%) Query: 160 AEIARTEWYREGRV--PLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQP 217 A+ A++ +++G + ++ ID GV+G+KV I P Sbjct: 1 AQRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLD---WDPTGKLGP 57 Query: 218 EKPAAQ 223 + P Sbjct: 58 KTPLPD 63 >UniRef50_Q9G916 Ribosomal protein S3 n=1 Tax=Ochromonas danica RepID=Q9G916_OCHDN Length = 250 Score = 63.8 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 55/134 (41%), Gaps = 14/134 (10%) Query: 86 KLRKVVADIAGVPAQINIAEVRKPELDAK---------LVADSITSQLERRVM-----FR 131 K + + I + I V+ L AK + I L ++ F Sbjct: 117 KFKYYLNKIFQKRLTLFIDLVKVFYLVAKKKATIHLLIYILGLIFKPLHKKKHAIYLAFL 176 Query: 132 RAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHT 191 + + + KG+K+ ++GRL G A+T + G++PL + + I + + +T Sbjct: 177 KKLFSYLIFRKHSQIKGVKLIIAGRLKGKTRAKTSKFILGKIPLSSEKEKIKASQTHIYT 236 Query: 192 TYGVIGVKVWIFKG 205 YG G+K+W+ Sbjct: 237 VYGCFGLKLWVNYK 250 >UniRef50_Q4MYB8 Ribosomal protein S3, putative n=1 Tax=Theileria parva RepID=Q4MYB8_THEPA Length = 232 Score = 62.3 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 80/232 (34%), Gaps = 28/232 (12%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKE------FADNLDSDFKVRQYLTKEL-AKASVS 53 M + V P +R + + +T + ++ + S Sbjct: 1 MSKIVSPLLLRFKNIPNYLNTIHIKLNNNKHYLTYFKFFQLLLNFIYLFKTKIGKYKNFS 60 Query: 54 RIVIERPAK-------SIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVP-------A 99 ++ + I + + + + +++ KL + Sbjct: 61 NKLLYINSNYYDFFSVHISLIFYNLKKNKALLFLYKNIIKLSNYINYFIKFNLYASNYFV 120 Query: 100 QINIAEVRKPELDAKLVADSITSQLERRVMFR-------RAMKRAVQNAMRLGAKGIKVE 152 I++ +++ + + V SI + +E+ F+ ++ ++ + ++ G K Sbjct: 121 FIHMKKLKYYKNNIYYVITSIKNFIEKNKNFKVRIIYFINSLFKSDKYNRKINIIGAKCL 180 Query: 153 VSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFK 204 SG L ++ Y G L + +++ Y T G++G+KVW+++ Sbjct: 181 YSGCLYKNSKKKSFKYARGNTSLSFVMSNVVYAKKSVKTDNGMVGIKVWLYR 232 >UniRef50_UPI000155D30A PREDICTED: hypothetical protein, partial n=2 Tax=Euteleostomi RepID=UPI000155D30A Length = 85 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 35/75 (46%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGED 83 + ++F + ++ ++LT+ELA+ S + + + I R V+G+KG Sbjct: 6 SKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRR 65 Query: 84 VEKLRKVVADIAGVP 98 + +L VV G P Sbjct: 66 IRELTAVVQKRFGFP 80 >UniRef50_D1HRG5 Whole genome shotgun sequence of line PN40024, scaffold_49.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HRG5_VITVI Length = 458 Score = 61.1 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 48/138 (34%) Query: 64 IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQ 123 + IH + V+ KKG+ + +L VV Sbjct: 110 TEIIIHATQTQNVLCKKGKKIRELTSVVQKRF---------------------------- 141 Query: 124 LERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHT--LRAD 181 M G KG +V +SG+L + A++ +++G + ++ Sbjct: 142 -----------------VMESGTKGCEVIMSGKLC-VQCAKSIKFKDGYLIFSGQLVKDY 183 Query: 182 IDYNTSEAHTTYGVIGVK 199 ID G++ +K Sbjct: 184 IDSTVRHVLLKQGILSIK 201 Score = 46.9 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 65 RVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV---PAQINIAEVRKPELDAKLVADSIT 121 + IH + V+GKKG + +L VV ++ + A A+S+ Sbjct: 330 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAESLR 389 Query: 122 SQLERRVMFRRAMKRAVQNAMR 143 +L ++ RRA + + Sbjct: 390 FKLLGGLVVRRAGYGVLSFDPK 411 >UniRef50_Q2TUF7 Ribosomal protein S3 n=18 Tax=Phaeophyceae RepID=Q2TUF7_9PHAE Length = 286 Score = 60.4 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 9/112 (8%) Query: 106 VRKPELDAKLVADSITSQLERRVM------FRRAMKRAVQNAMR-LGAKGIKVEVSGRLG 158 V K + A ++ I + R F +K+A + +G+K+++ GR Sbjct: 166 VIKNKASATSLSRFIIQNISSRQRRKRHYEFLGYLKQAFTALQKYKKIQGVKIQIKGRFT 225 Query: 159 GAEIARTEWYRE--GRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEIL 208 R++ ++ G++PL + I + T YG +G+KVWI E Sbjct: 226 HKAKGRSKVWKYQMGQMPLSQISMPIQAEYMQTQTGYGSVGLKVWICNWESK 277 >UniRef50_B2XX96 Ribosomal protein S3 n=1 Tax=Dictyostelium fasciculatum RepID=B2XX96_9MYCE Length = 983 Score = 60.0 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 11/208 (5%) Query: 23 FANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGE 82 F + K+F + D ++ +L + VI++ K + + + + K + Sbjct: 773 FYSHKKFIIKVLFDIILKVLKNSKLKNKKLYIKVIKKLIKYLYIPLVATSKIVQKKKYFK 832 Query: 83 DVEKLRKVVADIAGVPAQ---------INIAEVRKPELDAKLVADSITSQ--LERRVMFR 131 K+ ++ + + IN + + A+ + + + + RR + Sbjct: 833 KKNKIYFFLSQVLLYNIKQIVQTKSYVINFFGMISENITAETLLRRLVQRMDIRRRKYIK 892 Query: 132 RAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHT 191 A+ + G KV+ +GRL + +A ++G + L +DY Sbjct: 893 IAIGMRRKLERSKNFLGFKVKFAGRLSPSIMASQTIIQKGIIGTGRLNVYLDYAQGSVMF 952 Query: 192 TYGVIGVKVWIFKGEILGGMAAVEQPEK 219 YG G+KVW+ + K Sbjct: 953 KYGKCGIKVWLARNLYTYMPYKYVYSYK 980 >UniRef50_Q9MF63 Orf246 protein n=1 Tax=Beta vulgaris subsp. vulgaris RepID=Q9MF63_BETVU Length = 246 Score = 57.7 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 7/70 (10%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASV------SR 54 M +K +P +RL + + +S+WF + + + D +R Y+ + R Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFND-YYYGKLVYQDLNLRSYVGSIRPPTRLTFGSRPGR 59 Query: 55 IVIERPAKSI 64 +I K Sbjct: 60 CIIIHCQKRT 69 >UniRef50_Q9G8Q4 Ribosomal protein S3 n=1 Tax=Naegleria gruberi RepID=Q9G8Q4_NAEGR Length = 523 Score = 57.7 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 22/171 (12%) Query: 55 IVIERPAKSIRVT--IHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELD 112 + +E+ R+ + + + K E + K + + ++ + E Sbjct: 337 LELEKGNNMFRIFKSLQSYQLKEKYKLKQELMVDFNKELFYLFFNKYKLELKEKFSLFKK 396 Query: 113 AKLVA---DSITSQLERRVMFRRA--MKRAVQN-------AMRLGAKGIKVEVSGRLGGA 160 K + I S+ ++ F + +K+ + + GI++E +G Sbjct: 397 LKKKHIKLNYILSRFNKKSFFSKFLEIKKLFEELYYNEVLIKKYPLIGIRIECNGPPKRG 456 Query: 161 EIARTEWYRE--------GRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIF 203 AR Y + G++P ++ ADIDY S A T G IG+KVWIF Sbjct: 457 RQARLVAYHQIVKNYKLFGKMPNKSVLADIDYYQSFARTKQGSIGIKVWIF 507 >UniRef50_Q3LWD3 Ribosomal protein S3 n=1 Tax=Bigelowiella natans RepID=Q3LWD3_BIGNA Length = 262 Score = 56.9 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 50/135 (37%), Gaps = 4/135 (2%) Query: 77 IGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-RRVMFRRAMK 135 + K + + + I +I + + + + FR + Sbjct: 103 LKNKLTLTKNIISHLFFINSNKLKILYKNYKSSNISTMTQSSRMKEAFNYTNKSFRSIIF 162 Query: 136 RAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTY 193 ++ + G +G +++ G + ++ +T +R G + ++ + ID ++ + Sbjct: 163 NTLRFLINSGVRGCMIKLKG-VYRSKRTKTFKFRRGLISHSGIQNNDWIDSDSFYLNKKR 221 Query: 194 GVIGVKVWIFKGEIL 208 G +G+ + I K E Sbjct: 222 GTLGINIKIMKKERK 236 >UniRef50_Q3T4C4 Ribosomal protein S3 n=1 Tax=Smittium culisetae RepID=Q3T4C4_SMICU Length = 231 Score = 56.5 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 46 ELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAE 105 + KA +S + I++ I+ ++ K D+ K+ + +I + INI + Sbjct: 41 FIEKAIISEPIFIYKLNEIKIIIYYWSSFNLLLDK--DINKILLYINNILNIKVNINIIK 98 Query: 106 VRKPELDAKLVADSITSQLER-------------------------RVMFRRAMKRAVQN 140 ++KP L +K++++ I+ +++ + + Sbjct: 99 LKKPYLSSKILSEYISINIKKYNIKKIAKKIIKQIKIEKKLLNPLINFNYNNIKYYYINK 158 Query: 141 AMRLGAKGIKVEVSGRLGG---AEIARTEWYREGRVPLHTLRADIDY-NTSEAHTTYGVI 196 + GIK+ GRL AE + + +G + ++L IDY + G I Sbjct: 159 KLYSSISGIKLVFKGRLSKRRTAERKKILTFNKGFLNKNSLFTLIDYKSPYNFKFINGSI 218 Query: 197 GVK 199 G+K Sbjct: 219 GIK 221 >UniRef50_C0KT85 Ribosomal protein S3 (Fragment) n=2 Tax=Halimeda RepID=C0KT85_9CHLO Length = 176 Score = 56.5 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 23/149 (15%) Query: 55 IVIERPAKS-IRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN----------- 102 I I R ++ I + I +P I IGKKGE+++ +K + + +N Sbjct: 1 IKISRKIENHIEIVIRAQKPEIFIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKL 60 Query: 103 --IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQ---------NAMRLGAKGIKV 151 I V + + A +AD + LE+R+ ++ + A+R A + Sbjct: 61 RVILHVIRCQNGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSI 120 Query: 152 EVSGRLGGAEIARTEWYREGRVPLHTLRA 180 E S LG A+ + E R G V + + Sbjct: 121 ESSPGLGAADGSVFEQDRAGSVNGASFNS 149 >UniRef50_B5A4G6 40S ribosomal protein S3 n=1 Tax=Gymnochlora stellata RepID=B5A4G6_GYMST Length = 255 Score = 53.8 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 4/146 (2%) Query: 77 IGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLE-RRVMFRRAMK 135 I K ++ L + ++N+ +K + + + + L+ FR+ + Sbjct: 98 IASKKHIIKILLSRLLSERFTALRLNLRLYKKDKFSSHIQGLRLKKLLKYDYKRFRKEIS 157 Query: 136 RAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD--IDYNTSEAHTTY 193 +++ MR GA+G +++ G ++ RT + G V D Sbjct: 158 NSLKYIMRNGARGCLIQIKGA-HKSKRTRTVRFTRGFVSYAGGANARWTDGYHFNLKKKR 216 Query: 194 GVIGVKVWIFKGEILGGMAAVEQPEK 219 GVIG+K+ I K + P K Sbjct: 217 GVIGIKIKILKSSSSIKRKSFIPPGK 242 >UniRef50_Q2TUB8 Ribosomal protein S3 n=1 Tax=Dictyota dichotoma RepID=Q2TUB8_DICDH Length = 277 Score = 53.4 bits (127), Expect = 5e-06, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 5/97 (5%) Query: 114 KLVADSITSQLERRVM--FRRAMKRAVQ-NAMRLGAKGIKVEVSGRLGGAEIARTEWYRE 170 + +I ++ +R+ F R +K+ ++ + KGIK+++ GR G R++ ++ Sbjct: 181 NFIRQNIRTRSKRKKHTDFTRFLKQGIEIFDSKKKIKGIKIQLKGRFGYKPKGRSKIWKY 240 Query: 171 --GRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 G +PL +RA I Y + +A T G +G+K WI+ Sbjct: 241 QLGSLPLSQIRAVIQYRSQQAQTKLGSVGIKTWIYYN 277 >UniRef50_A4XIG3 PpiC-type peptidyl-prolyl cis-trans isomerase n=2 Tax=Clostridia RepID=A4XIG3_CALS8 Length = 340 Score = 50.7 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 4/127 (3%) Query: 27 KEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVT--IHTARPGIVIGKKGEDV 84 +++ + L D ++R Y + L K R + R+ ++ + E + Sbjct: 119 RKYIEELKRDMEMRNYFNQYLRKIGSDENHFYRDLQKTRIINKLYKYVTERITLSDSEVI 178 Query: 85 EKLRKVVADIAGVPAQINIAEVRKPELDAK--LVADSITSQLERRVMFRRAMKRAVQNAM 142 + + + V E DAK VA+ I S+L+R F + +K+ + Sbjct: 179 KYYNANKSQFRKIKVMDIFLRVENAEEDAKKRKVANEIISELKRGEDFEKLVKKYSEVES 238 Query: 143 RLGAKGI 149 G KGI Sbjct: 239 LDGKKGI 245 >UniRef50_B9SHX4 Chloroplast 30S ribosomal protein S7, putative n=1 Tax=Ricinus communis RepID=B9SHX4_RICCO Length = 89 Score = 48.4 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 29/43 (67%) Query: 134 MKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176 M++A++ KGI+V+++GRL G EIAR EW R+GR + Sbjct: 1 MRKAIELTEHADTKGIQVQIAGRLDGKEIARVEWIRKGRTKNN 43 >UniRef50_C5LNU7 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LNU7_9ALVE Length = 106 Score = 47.3 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%) Query: 24 ANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKG 81 + ++F + ++ + LT LA+ S + + + I R V+G+KG Sbjct: 11 SKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68 >UniRef50_D2XDV4 Orf 195 n=1 Tax=Pneumocystis carinii RepID=D2XDV4_PNECA Length = 195 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 66/180 (36%), Gaps = 13/180 (7%) Query: 32 NLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVV 91 L ++ + + + ++S + I V + PG I K + +L + + Sbjct: 22 YLKESQEIARIVRQFFFDMNLSDPKVNIQMHKIYVRFYYYNPGRPIDPK--RITQLEQEL 79 Query: 92 ADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVM-----FRRAMKRAVQNAMRLGA 146 + +I+ + P D+++ A+ + + + R ++ ++ Sbjct: 80 SKQYKRKVKIDGIPLIYPFTDSQIFANHFHHTPLKEIRKKVQTYLRPVEDSLFFIPGKYL 139 Query: 147 KGIKVEVSGRLGGAE-IARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 GI+++V GR + ++ E G T S T YG+ + V ++ G Sbjct: 140 SGIQIQVGGRYYRNQKRSKREKLFLG-----TKSPYFSSRHSTTRTVYGLRTMTVTLYFG 194 >UniRef50_Q9G9H3 Ribosomal protein S3 n=1 Tax=Schizophyllum commune RepID=Q9G9H3_SCHCO Length = 1453 Score = 42.3 bits (98), Expect = 0.012, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 50/129 (38%), Gaps = 15/129 (11%) Query: 87 LRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRV------------MFRRAM 134 L +++ + P ++ + + D+ ++A+ + + +R +F+R Sbjct: 1314 LCHILSKLFKRPVELKLTRLHYHYTDSNILANFLAIMINKRKLPLILIKLFSNTVFKRYN 1373 Query: 135 KRAVQNAM-RLGAKGIKVEVSGRLGGAEIA--RTEWYREGRVPLHTLRADIDYNTSEAHT 191 V+ +M G+ + V+GRL ++I+ +T R + +D+ Sbjct: 1374 NIHVKRSMIPSFISGLNIRVAGRLLTSKISPRKTVKKRRVGISATGKVNYLDFARYTNKN 1433 Query: 192 TYGVIGVKV 200 G + V Sbjct: 1434 KRGAFSITV 1442 >UniRef50_B5SQ51 Ribosomal protein S3 n=1 Tax=Blastocystis sp. DMP/02-328 RepID=B5SQ51_9STRA Length = 301 Score = 41.9 bits (97), Expect = 0.017, Method: Composition-based stats. Identities = 20/179 (11%), Positives = 60/179 (33%), Gaps = 10/179 (5%) Query: 28 EFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTI-HTARPGIVIGKKGEDVEK 86 + + K++ +++ I + R S + I + ++ Sbjct: 131 NYKNLNSMFNKIQNLTQSTTFNSNL--IKVSRTTNSKYLNITYFKSLRYLLYVLCYPQFT 188 Query: 87 LRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGA 146 + + A + ++ + + + + L R + +++ Sbjct: 189 ILNISAQNLANLIFYELDKLDNTVKNYNFLFYTFFNIL------RDQLTIYLKDD-SCKL 241 Query: 147 KGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKG 205 GI++++ GR + + + G + L+ L+ DY + + G +K+W+ Sbjct: 242 SGIRIQIKGRYFLTKRKKIFIFNMGHLNLNQLKIYKDYYSLNLIKSTGASTIKIWLSYK 300 >UniRef50_P92511 Uncharacterized ribosomal S3-like protein AtMg00690, mitochondrial n=3 Tax=malvids RepID=M690_ARATH Length = 240 Score = 40.7 bits (94), Expect = 0.037, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 16/24 (66%) Query: 1 MGQKVHPNGIRLGIVKPWNSTWFA 24 M +K +P +RLG + +S+WF+ Sbjct: 46 MARKGNPILVRLGKNRSSDSSWFS 69 >UniRef50_UPI00006CD8A3 hypothetical protein TTHERM_00522130 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD8A3 Length = 3452 Score = 40.7 bits (94), Expect = 0.044, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 5/129 (3%) Query: 3 QKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVR-QYLTKELAKASVSRIVIERPA 61 Q ++ + +R + + S + F + + YL K++ + +S IVIE Sbjct: 3033 QSINSSQLRFYMNQAHVSKYSTQKINFVKYFQKNLTEQTSYLEKKVWEHLISAIVIEENQ 3092 Query: 62 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT 121 + V GI+ E + + + + + + I E + ++ DS T Sbjct: 3093 QHKLVLKINTFNGIL----RETLSSIVINMNERDNILYEFYIEEYIFSKSTPLMLNDSFT 3148 Query: 122 SQLERRVMF 130 L R+ F Sbjct: 3149 QNLYIRLHF 3157 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.143 0.401 Lambda K H 0.267 0.0438 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,291,133,517 Number of Sequences: 3077464 Number of extensions: 49727788 Number of successful extensions: 156554 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 543 Number of HSP's successfully gapped in prelim test: 109 Number of HSP's that attempted gapping in prelim test: 154978 Number of HSP's gapped (non-prelim): 873 length of query: 233 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 108 effective length of database: 655,713,356 effective search space: 70817042448 effective search space used: 70817042448 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 91 (39.6 bits)