18/01/2012 23:02:58 : INFO  : Run start: Wed Jan 18 23:02:57 GMT 2012
18/01/2012 23:03:04 : INFO  : Initialised job
18/01/2012 23:03:05 : INFO  : Renaming log file 'phyre2_20120118_230256.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/1caa85e17e3ac013/phyre_20120118_230256.log'
18/01/2012 23:03:07 : INFO  : Initialised job:
Sequence
>batch____
MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQV
MRLQTEMA

18/01/2012 23:03:08 : INFO  : Checked sequence
18/01/2012 23:03:11 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 23:03:12 : INFO  : PSI-BLAST 3 iterations
18/01/2012 23:03:47 : INFO  : PSI-BLAST 5 iterations
18/01/2012 23:04:17 : INFO  : Finished PSI-BLAST
18/01/2012 23:04:19 : INFO  : Running Buildali to generate a3m file
18/01/2012 23:06:02 : INFO  : Converting to HMM
18/01/2012 23:06:03 : INFO  : Calibrating HMM
18/01/2012 23:06:11 : INFO  : Searching HMM database
18/01/2012 23:08:12 : INFO  : Finished buildali
18/01/2012 23:08:13 : INFO  : Predicting secondary structure
18/01/2012 23:08:22 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 23:08:24 : INFO  : Predicting Disordered regions
18/01/2012 23:08:30 : INFO  : Predicted Disorder (Disopred)
18/01/2012 23:08:31 : INFO  : Running memsat_svm check
18/01/2012 23:10:55 : INFO  : Globular protein
18/01/2012 23:10:56 : INFO  : Predicted Transmembrane (memsat_svm) ID '1caa85e17e3ac013'
18/01/2012 23:10:58 : INFO  : Initialising fold library search
18/01/2012 23:11:01 : INFO  : Initialised search input
18/01/2012 23:11:04 : INFO  : Building Ensemble models
18/01/2012 23:11:08 : INFO  : Building hh.c2jroA_.model.1.pdb
18/01/2012 23:11:24 : INFO  : Building c2jroA_.1.pdb
18/01/2012 23:11:40 : INFO  : Building d1t0hb_.2.pdb
18/01/2012 23:11:54 : INFO  : Building d1njha_.3.pdb
18/01/2012 23:12:09 : INFO  : Building c2ow7A_.4.pdb
18/01/2012 23:12:23 : INFO  : Building c1htyA_.5.pdb
18/01/2012 23:12:38 : INFO  : Building c1o7dA_.6.pdb
18/01/2012 23:12:52 : INFO  : Building d3bvua3.7.pdb
18/01/2012 23:13:07 : INFO  : Building d1ve2a1.8.pdb
18/01/2012 23:13:20 : INFO  : Building c2b1kA_.9.pdb
18/01/2012 23:13:36 : INFO  : Building c3i0yC_.10.pdb
18/01/2012 23:13:51 : INFO  : Building c3jx9B_.11.pdb
18/01/2012 23:14:05 : INFO  : Building d1v3ya_.12.pdb
18/01/2012 23:14:19 : INFO  : Building d1o12a1.13.pdb
18/01/2012 23:14:37 : INFO  : Building c1cbfA_.14.pdb
18/01/2012 23:14:51 : INFO  : Building d1cbfa_.15.pdb
18/01/2012 23:15:06 : INFO  : Building d1oh4a_.16.pdb
18/01/2012 23:15:22 : INFO  : Building c2e0kA_.17.pdb
18/01/2012 23:15:37 : INFO  : Building d1x4ta1.18.pdb
18/01/2012 23:15:52 : INFO  : Building d2gexa1.19.pdb
18/01/2012 23:16:07 : INFO  : Building c2qbuA_.20.pdb
18/01/2012 23:16:39 : INFO  : Finished HH model building
18/01/2012 23:16:41 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 23:17:28 : INFO  : html domain output complete ID '1caa85e17e3ac013'
18/01/2012 23:23:10 : INFO  : Run end  : Wed Jan 18 23:23:09 GMT 2012
