15 c1vmiA_ Probab=99.94   E-value=1.1e-24  Score=167.02  Aligned_columns=269  Identities=17%

Q ss_pred             CCCCEEEECCCCCCCCHHHH--HHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCC-CEECCCCHHCCCCCCCCEEEEECC
Q ss_conf             89818997488779599999--998621589829998899999999997389765-022363011011237810120046
Q batch____         3 KTQRVVITPGEPAGIGPDLV--VQLAQREWPVELVVCADATLLTNRAAMLGLPLT-LRPYSPNSPAQPQTAGTLTLLPVA   79 (329)
Q Consensus         3 ~~~~Iait~GDpaGIGPEi~--vkal~~~~~~~~ilvGd~~~L~~~~~~~g~~~~-i~~i~~~~~~~~~~~~~i~v~~~~   79 (329)
                      .++||++..|+-    |++.  ++.+.++..+++||+||++.++..++..|++.. +++++..+...+.+          
T Consensus        19 ~~krIv~~eg~D----~~vl~Aa~~a~~~g~a~~iLVG~~~~I~~~~~~~g~~~~~~~II~~~~~~~~~~----------   84 (329)
T c1vmiA_          19 APARVVFPDALD----QRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAXDGLQVIDPHGNLAXRE----------   84 (329)
T ss_dssp             CCCEEEESCCSS----HHHHHHHHHHHHTTSCEEEEESCHHHHHHHHHHHTCCCTTCEEECTTSCHHHHH----------
T ss_pred             CCCEEEEECCCC----HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH----------
T ss_conf             798799976999----899999999998698199996898999999997499823316522432101234----------


Q ss_pred             CCCCCCCCCCCHHHHHHH------------HHHHHHHHHHHHCCCCCEEEE--CCCCHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf             544456476588887879------------999999999998399869998--797989998579987887899997518
Q batch____        80 LRAPVTAGQLAVENGHYV------------VETLARACDGCLNGEFAALIT--GPVHKGVINDAGIPFTGHTEFFEERSQ  145 (329)
Q Consensus        80 ~~~~i~~G~~~~~~g~~~------------~~si~~A~~l~~~G~~daiVT--ap~ska~l~~ag~~~~GhTe~l~~~~g  145 (329)
                              .+.....++.            .+++..|+.++++|++|++|+  .++|+..+..+..       .++.++|
T Consensus        85 --------~~~~~~~rk~k~~s~~~a~~~~~~~~~~A~~lV~~G~aD~lv~G~~~~T~~~l~~~l~-------~~g~~~g  149 (329)
T c1vmiA_          85 --------EFAHRWLARAGEKTPPDALEKLTDPLXFAAAXVSAGKADVCIAGNLSSTANVLRAGLR-------IIGLQPG  149 (329)
T ss_dssp             --------HHHHHHHHHHGGGCCTTHHHHTTSHHHHHHHHHHTTSCSEEEECSSSCHHHHHHHHHH-------HTCBCTT
T ss_pred             --------HHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH-------HHCCCCC
T ss_conf             --------5778998421588899999864120125677776498437995267676999999999-------8455688


Q ss_pred             CCCEEEEEE--CCCCEEEEECCCHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCH
Q ss_conf             996389983--1884487721415365555628--999999999999999999738999808997047888887766860
Q batch____       146 AKKVVMMLA--TEELRVALATTHLPLRDIADAI--TPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTE  221 (329)
Q Consensus       146 ~~~~~m~~~--~~~l~v~~vT~Hi~L~dv~~~i--t~~~l~~~~~l~~~~l~~~~gi~~PrIavl~lNPHaGe~g~~G~E  221 (329)
                      ++++..+++  .|.-...++     +.|++.|+  +++.+.++++++..++| .+|+++||||+|+-    .|.|.--.+
T Consensus       150 ~~~~s~~~v~~~~~~~~~l~-----~tD~gvni~P~~~~l~~ia~~a~~~a~-~lg~~~PkVAlLS~----s~~gs~~~~  219 (329)
T c1vmiA_         150 CKTLSSIFLXLPQYSGPALG-----FADCSVVPQPTAAQLADIALASAETWR-AITGEEPRVAXLSF----SSNGSARHP  219 (329)
T ss_dssp             CCCCEEEEEEEESSSCCCEE-----EESSSSCSSCCHHHHHHHHHHHHHHHH-HHHSSCCEEEEECS----CSTTSSCSH
T ss_pred             CCEEEEEEEEECCCCCCEEE-----EEECCCCCCCCHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEC----CCCCCCCCC
T ss_conf             71245788740358982799-----981233789898999999999999999-83889984788851----566887776


Q ss_pred             HHHHHHHHHHHHHHC--CCEEEECCCHHHHHHHHH----------CCCCCEEEECCCCHHHHHHHHHCCCCCEEEEE---
Q ss_conf             699999999997408--977994127245310212----------18747899788216789998623235036882---
Q batch____       222 EIDTIIPVLNELRAQ--GMKLNGPLPADTLFQPKY----------LDNADAVLAMYHDQGLPVLKYQGFGRGVNITL---  286 (329)
Q Consensus       222 e~~~i~pa~~~l~~~--~~~~~Gp~~~d~~F~~~~----------~~~~D~vv~myhDqG~i~lK~l~f~~~vn~tl---  286 (329)
                      ..+....+.+.+|.+  ++.++||+.-|..+.+..          .|+.|+++.-.-|.|||..|++.+..+....+   
T Consensus       220 ~~~~~~~a~el~~~~~~~~~vdGpl~~D~A~~~~~a~~k~~~s~v~G~Adili~P~l~~gNi~~K~~~~~~~~~~~G~il  299 (329)
T c1vmiA_         220 CVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVXVFPSLEAGNIGYKIAQRLGGYRAVGPLI  299 (329)
T ss_dssp             HHHHHHHHHHHHHHHCTTSEEEEEECHHHHHCHHHHHHHCTTCTTTTCCSEEECSSHHHHHHHHHHHHHHHCEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             46999999999852078707740202210016998731057765577577788237203568999999744886100045


Q ss_pred             ---CCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             ---062344303655504467606889899999999999
Q batch____       287 ---GLPFIRTSVDHGTALELAGRGKADVGSFITALNLAI  322 (329)
Q Consensus       287 ---Glp~irts~dhGta~dIag~G~a~~~s~~~Ai~~A~  322 (329)
                         ..|++.+|.            .++...+.|++-+|+
T Consensus       300 ~G~~~PV~~~SR------------~~s~~~i~~~~aiaa  326 (329)
T c1vmiA_         300 QGLAAPXHDLSR------------GCSVQEIIELALVAA  326 (329)
T ss_dssp             ESBSSCEEECCT------------TCCHHHHHHHHHHHH
T ss_pred             ECCCCCEECCCC------------CCCHHHHHHHHHHHE
T ss_conf             524777020788------------748889987363010