Phyre 2 Results for P19624

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Email | l.a.kelley@imperial.ac.uk
Description | P19624
Date | Thu Jan 5 11:37:23 GMT 2012
Unique Job ID | 1c836010a4a95bde

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template d1r8ka_
Top template information
Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PdxA-like
Confidence and coverage
Confidence: | 100.0% | Coverage: | 99%
327 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | V | K | T | Q | R | V | V | I | T | P | G | E | P | A | G | I | G | P | D | L | V | V | Q | L | A | Q | R | E | W | P | V | E | L | V | V | C | A | D | A | T | L | L | T | N | R | A | A | M | L | G | L | P | L | T | L | R | P | Y | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | P | N | S | P | A | Q | P | Q | T | A | G | T | L | T | L | L | P | V | A | L | R | A | P | V | T | A | G | Q | L | A | V | E | N | G | H | Y | V | V | E | T | L | A | R | A | C | D | G | C | L | N | G | E | F | A | A | L | I | T | G | P
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | V | H | K | G | V | I | N | D | A | G | I | P | F | T | G | H | T | E | F | F | E | E | R | S | Q | A | K | K | V | V | M | M | L | A | T | E | E | L | R | V | A | L | A | T | T | H | L | P | L | R | D | I | A | D | A | I | T | P | A | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | L | H | E | V | I | A | I | L | H | H | D | L | R | T | K | F | G | I | A | E | P | R | I | L | V | C | G | L | N | P | H | A | G | E | G | G | H | M | G | T | E | E | I | D | T | I | I | P | V | L | N | E | L | R | A | Q | G | M | K | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | N | G | P | L | P | A | D | T | L | F | Q | P | K | Y | L | D | N | A | D | A | V | L | A | M | Y | H | D | Q | G | L | P | V | L | K | Y | Q | G | F | G | R | G | V | N | I | T | L | G | L | P | F | I | R | T | S | V | D | H | G | T | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | .
Sequence |  | L | E | L | A | G | R | G | K | A | D | V | G | S | F | I | T | A | L | N | L | A | I | K | M | I | V | N | T | Q
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| d1r8ka_ |

### PDB 1r8k chain A

Region: 3 - 329
Aligned: 327
Modelled: 327
Confidence: 100.0%
Identity: 91%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: PdxA-like

Phyre2
2 |
| d1ptma_ |

### PDB 1ptm chain A

Region: 2 - 329
Aligned: 328
Modelled: 328
Confidence: 100.0%
Identity: 98%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: PdxA-like

Phyre2
3 |
| c2hi1A_ |

### PDB 2hi1 chain A

Region: 3 - 325
Aligned: 320
Modelled: 323
Confidence: 100.0%
Identity: 36%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 2;
PDBTitle: the structure of a putative 4-hydroxythreonine-4-phosphate2 dehydrogenase from salmonella typhimurium.

Phyre2
4 |
| c1yxoB_ |

### PDB 1yxo chain B

Region: 6 - 328
Aligned: 323
Modelled: 320
Confidence: 100.0%
Identity: 60%
PDB header:oxidoreductase
Chain: B: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 1;
PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein pdxa2 pa0593

Phyre2
5 |
| d1u7na_ |

### PDB 1u7n chain A

Region: 5 - 328
Aligned: 272
Modelled: 284
Confidence: 100.0%
Identity: 16%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: PlsX-like

Phyre2
6 |
| d1vi1a_ |

### PDB 1vi1 chain A

Region: 6 - 328
Aligned: 276
Modelled: 297
Confidence: 100.0%
Identity: 14%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: PlsX-like

Phyre2
7 |
| c2iv0A_ |

### PDB 2iv0 chain A

Region: 1 - 323
Aligned: 292
Modelled: 297
Confidence: 100.0%
Identity: 18%
PDB header:oxidoreductase
Chain: A: PDB Molecule:isocitrate dehydrogenase;
PDBTitle: thermal stability of isocitrate dehydrogenase from2 archaeoglobus fulgidus studied by crystal structure3 analysis and engineering of chimers

Phyre2
8 |
| d1xcoa_ |

### PDB 1xco chain A

Region: 3 - 325
Aligned: 276
Modelled: 305
Confidence: 100.0%
Identity: 15%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Phosphotransacetylase

Phyre2
9 |
| c1ycoA_ |

### PDB 1yco chain A

Region: 6 - 327
Aligned: 255
Modelled: 288
Confidence: 100.0%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:branched-chain phosphotransacylase;
PDBTitle: crystal structure of a branched-chain phosphotransacylase from2 enterococcus faecalis v583

Phyre2
10 |
| d2af4c1 |

### PDB 2af4 chain C domain 1

Region: 4 - 325
Aligned: 282
Modelled: 304
Confidence: 100.0%
Identity: 10%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Phosphotransacetylase

Phyre2
11 |
| d1r5ja_ |

### PDB 1r5j chain A

Region: 3 - 325
Aligned: 277
Modelled: 299
Confidence: 100.0%
Identity: 13%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Phosphotransacetylase

Phyre2
12 |
| c1tyoA_ |

### PDB 1tyo chain A

Region: 3 - 320
Aligned: 288
Modelled: 291
Confidence: 99.9%
Identity: 14%
PDB header:oxidoreductase
Chain: A: PDB Molecule:isocitrate dehydrogenase;
PDBTitle: isocitrate dehydrogenase from the hyperthermophile aeropyrum pernix in2 complex with etheno-nadp

Phyre2
13 |
| c3tngA_ |

### PDB 3tng chain A

Region: 3 - 326
Aligned: 256
Modelled: 291
Confidence: 99.9%
Identity: 13%
PDB header:transferase
Chain: A: PDB Molecule:lmo1369 protein;
PDBTitle: the crystal structure of a possible phosphate acetyl/butaryl2 transferase from listeria monocytogenes egd-e.

Phyre2
14 |
| d1vmia_ |

### PDB 1vmi chain A

Region: 3 - 322
Aligned: 269
Modelled: 289
Confidence: 99.9%
Identity: 17%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Phosphotransacetylase

Phyre2
15 |
| c1vmiA_ |

### PDB 1vmi chain A

Region: 3 - 322
Aligned: 269
Modelled: 281
Confidence: 99.9%
Identity: 17%
PDB header:transferase
Chain: A: PDB Molecule:putative phosphate acetyltransferase;
PDBTitle: crystal structure of putative phosphate acetyltransferase2 (np_416953.1) from escherichia coli k12 at 2.32 a resolution

Phyre2
16 |
| d1wpwa_ |

### PDB 1wpw chain A

Region: 6 - 323
Aligned: 250
Modelled: 261
Confidence: 98.7%
Identity: 14%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Dimeric isocitrate & isopropylmalate dehydrogenases

Phyre2
17 |
| d1cnza_ |

### PDB 1cnz chain A

Region: 1 - 323
Aligned: 262
Modelled: 274
Confidence: 98.7%
Identity: 17%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Dimeric isocitrate & isopropylmalate dehydrogenases

Phyre2
18 |
| d1a05a_ |

### PDB 1a05 chain A

Region: 5 - 323
Aligned: 252
Modelled: 276
Confidence: 98.6%
Identity: 18%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Dimeric isocitrate & isopropylmalate dehydrogenases

Phyre2
19 |
| d1cm7a_ |

### PDB 1cm7 chain A

Region: 1 - 323
Aligned: 262
Modelled: 276
Confidence: 98.6%
Identity: 19%
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Dimeric isocitrate & isopropylmalate dehydrogenases

Phyre2
20 |
| c3r8wC_ |

### PDB 3r8w chain C

Region: 3 - 323
Aligned: 260
Modelled: 274
Confidence: 98.6%
Identity: 18%
PDB header:oxidoreductase
Chain: C: PDB Molecule:3-isopropylmalate dehydrogenase 2, chloroplastic;
PDBTitle: structure of 3-isopropylmalate dehydrogenase isoform 2 from2 arabidopsis thaliana at 2.2 angstrom resolution

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1r8ka_ |
|  | 100.0 | 91 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PdxA-like
2 | d1ptma_ |
|  | 100.0 | 98 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PdxA-like
3 | c2hi1A_ |
|  | 100.0 | 36 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 2; PDBTitle: the structure of a putative 4-hydroxythreonine-4-phosphate2 dehydrogenase from salmonella typhimurium.
4 | c1yxoB_ |
|  | 100.0 | 60 | PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 1; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein pdxa2 pa0593
5 | d1u7na_ |
|  | 100.0 | 16 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PlsX-like
6 | d1vi1a_ |
|  | 100.0 | 14 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PlsX-like
7 | c2iv0A_ |
|  | 100.0 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: thermal stability of isocitrate dehydrogenase from2 archaeoglobus fulgidus studied by crystal structure3 analysis and engineering of chimers
8 | d1xcoa_ |
|  | 100.0 | 15 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Phosphotransacetylase
9 | c1ycoA_ |
|  | 100.0 | 18 | PDB header:transferase Chain: A: PDB Molecule:branched-chain phosphotransacylase; PDBTitle: crystal structure of a branched-chain phosphotransacylase from2 enterococcus faecalis v583
10 | d2af4c1 |
|  | 100.0 | 10 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Phosphotransacetylase
11 | d1r5ja_ |
|  | 100.0 | 13 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Phosphotransacetylase
12 | c1tyoA_ |
|  | 99.9 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase; PDBTitle: isocitrate dehydrogenase from the hyperthermophile aeropyrum pernix in2 complex with etheno-nadp
13 | c3tngA_ |
|  | 99.9 | 13 | PDB header:transferase Chain: A: PDB Molecule:lmo1369 protein; PDBTitle: the crystal structure of a possible phosphate acetyl/butaryl2 transferase from listeria monocytogenes egd-e.
14 | d1vmia_ |
|  | 99.9 | 17 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Phosphotransacetylase
15 | c1vmiA_ |
|  | 99.9 | 17 | PDB header:transferase Chain: A: PDB Molecule:putative phosphate acetyltransferase; PDBTitle: crystal structure of putative phosphate acetyltransferase2 (np_416953.1) from escherichia coli k12 at 2.32 a resolution
16 | d1wpwa_ |
|  | 98.7 | 14 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
17 | d1cnza_ |
|  | 98.7 | 17 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
18 | d1a05a_ |
|  | 98.6 | 18 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
19 | d1cm7a_ |
|  | 98.6 | 19 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
20 | c3r8wC_ |
|  | 98.6 | 18 | PDB header:oxidoreductase Chain: C: PDB Molecule:3-isopropylmalate dehydrogenase 2, chloroplastic; PDBTitle: structure of 3-isopropylmalate dehydrogenase isoform 2 from2 arabidopsis thaliana at 2.2 angstrom resolution
21 | c3u1hA_ |
| not modelled | 98.6 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:3-isopropylmalate dehydrogenase; PDBTitle: crystal structure of ipmdh from the last common ancestor of bacillus
22 | c3blxL_ |
| not modelled | 98.5 | 18 | PDB header:oxidoreductase Chain: L: PDB Molecule:isocitrate dehydrogenase [nad] subunit 2; PDBTitle: yeast isocitrate dehydrogenase (apo form)
23 | d1g2ua_ |
| not modelled | 98.4 | 18 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
24 | d1xaca_ |
| not modelled | 98.4 | 17 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
25 | d1v53a1 |
| not modelled | 98.3 | 18 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
26 | d1hqsa_ |
| not modelled | 98.3 | 21 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
27 | d1vlca_ |
| not modelled | 98.1 | 16 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
28 | c2d1cB_ |
| not modelled | 97.4 | 18 | PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase; PDBTitle: crystal structure of tt0538 protein from thermus thermophilus hb8
29 | c3blxM_ |
| not modelled | 96.9 | 20 | PDB header:oxidoreductase Chain: M: PDB Molecule:isocitrate dehydrogenase [nad] subunit 1; PDBTitle: yeast isocitrate dehydrogenase (apo form)
30 | c2d4vD_ |
| not modelled | 96.9 | 27 | PDB header:oxidoreductase Chain: D: PDB Molecule:isocitrate dehydrogenase; PDBTitle: crystal structure of nad dependent isocitrate dehydrogenase2 from acidithiobacillus thiooxidans
31 | c2e0cA_ |
| not modelled | 96.8 | 30 | PDB header:oxidoreductase Chain: A: PDB Molecule:409aa long hypothetical nadp-dependent isocitrate PDBTitle: crystal structure of isocitrate dehydrogenase from sulfolobus tokodaii2 strain7 at 2.0 a resolution
32 | d1w0da_ |
| not modelled | 96.7 | 26 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
33 | c3fmxX_ |
| not modelled | 96.6 | 23 | PDB header:oxidoreductase Chain: X: PDB Molecule:tartrate dehydrogenase/decarboxylase; PDBTitle: crystal structure of tartrate dehydrogenase from pseudomonas2 putida complexed with nadh
34 | d1pb1a_ |
| not modelled | 96.6 | 26 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
35 | c1x0lB_ |
| not modelled | 95.7 | 24 | PDB header:oxidoreductase Chain: B: PDB Molecule:homoisocitrate dehydrogenase; PDBTitle: crystal structure of tetrameric homoisocitrate dehydrogenase from an2 extreme thermophile, thermus thermophilus
36 | c2qfyE_ |
| not modelled | 92.3 | 13 | PDB header:oxidoreductase Chain: E: PDB Molecule:isocitrate dehydrogenase [nadp]; PDBTitle: crystal structure of saccharomyces cerevesiae mitochondrial nadp(+)-2 dependent isocitrate dehydrogenase in complex with a-ketoglutarate
37 | d1t0la_ |
| not modelled | 91.7 | 13 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
38 | d1lwda_ |
| not modelled | 91.6 | 16 | Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases
39 | c3us8A_ |
| not modelled | 90.3 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase [nadp]; PDBTitle: crystal structure of an isocitrate dehydrogenase from sinorhizobium2 meliloti 1021
40 | d2jgra1 |
| not modelled | 90.1 | 19 | Fold:NAD kinase/diacylglycerol kinase-like Superfamily:NAD kinase/diacylglycerol kinase-like Family:Diacylglycerol kinase-like
41 | c1zorB_ |
| not modelled | 86.9 | 13 | PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase; PDBTitle: isocitrate dehydrogenase from the hyperthermophile thermotoga maritima
42 | d2p1ra1 |
| not modelled | 86.6 | 18 | Fold:NAD kinase/diacylglycerol kinase-like Superfamily:NAD kinase/diacylglycerol kinase-like Family:Diacylglycerol kinase-like
43 | c2pjuD_ |
| not modelled | 85.0 | 13 | PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr
44 | c2bonB_ |
| not modelled | 81.4 | 18 | PDB header:transferase Chain: B: PDB Molecule:lipid kinase; PDBTitle: structure of an escherichia coli lipid kinase (yegs)
45 | c2ohoA_ |
| not modelled | 81.0 | 23 | PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: structural basis for glutamate racemase inhibitor
46 | c2uxqB_ |
| not modelled | 80.8 | 21 | PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase native; PDBTitle: isocitrate dehydrogenase from the psychrophilic bacterium2 desulfotalea psychrophila: biochemical properties and3 crystal structure analysis
47 | d2bona1 |
| not modelled | 77.0 | 18 | Fold:NAD kinase/diacylglycerol kinase-like Superfamily:NAD kinase/diacylglycerol kinase-like Family:Diacylglycerol kinase-like
48 | c2qzsA_ |
| not modelled | 75.3 | 14 | PDB header:transferase Chain: A: PDB Molecule:glycogen synthase; PDBTitle: crystal structure of wild-type e.coli gs in complex with adp2 and glucose(wtgsb)
49 | d2pjua1 |
| not modelled | 66.0 | 13 | Fold:Chelatase-like Superfamily:PrpR receptor domain-like Family:PrpR receptor domain-like
50 | d2qv7a1 |
| not modelled | 64.3 | 24 | Fold:NAD kinase/diacylglycerol kinase-like Superfamily:NAD kinase/diacylglycerol kinase-like Family:Diacylglycerol kinase-like
51 | c2qv7A_ |
| not modelled | 64.3 | 24 | PDB header:transferase Chain: A: PDB Molecule:diacylglycerol kinase dgkb; PDBTitle: crystal structure of diacylglycerol kinase dgkb in complex with adp2 and mg
52 | c1zuwA_ |
| not modelled | 62.0 | 15 | PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase 1; PDBTitle: crystal structure of b.subtilis glutamate racemase (race) with d-glu
53 | c2gn9B_ |
| not modelled | 58.3 | 20 | PDB header:lyase Chain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc
54 | d1yo6a1 |
| not modelled | 58.0 | 23 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
55 | c2wdfA_ |
| not modelled | 50.4 | 23 | PDB header:hydrolase Chain: A: PDB Molecule:sulfur oxidation protein soxb; PDBTitle: termus thermophilus sulfate thiohydrolase soxb
56 | c3cg4A_ |
| not modelled | 50.2 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey-like); PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1
57 | c3toxG_ |
| not modelled | 48.1 | 20 | PDB header:oxidoreductase Chain: G: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase in complex with2 nad(p) from sinorhizobium meliloti 1021
58 | c3uk7B_ |
| not modelled | 46.3 | 22 | PDB header:transferase Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing PDBTitle: crystal structure of arabidopsis thaliana dj-1d
59 | c2uvdE_ |
| not modelled | 43.3 | 18 | PDB header:oxidoreductase Chain: E: PDB Molecule:3-oxoacyl-(acyl-carrier-protein) reductase; PDBTitle: the crystal structure of a 3-oxoacyl-(acyl carrier protein)2 reductase from bacillus anthracis (ba3989)
60 | c3n74A_ |
| not modelled | 41.4 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:3-ketoacyl-(acyl-carrier-protein) reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from2 brucella melitensis
61 | c2x0dA_ |
| not modelled | 40.1 | 15 | PDB header:transferase Chain: A: PDB Molecule:wsaf; PDBTitle: apo structure of wsaf
62 | d1z6za1 |
| not modelled | 38.2 | 25 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
63 | c2q6vA_ |
| not modelled | 38.0 | 16 | PDB header:transferase Chain: A: PDB Molecule:glucuronosyltransferase gumk; PDBTitle: crystal structure of gumk in complex with udp
64 | d1nffa_ |
| not modelled | 37.3 | 17 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
65 | c3f5sA_ |
| not modelled | 37.2 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of putatitve short chain dehydrogenase from shigella2 flexneri 2a str. 301
66 | c3ak4C_ |
| not modelled | 37.2 | 15 | PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-dependent quinuclidinone reductase; PDBTitle: crystal structure of nadh-dependent quinuclidinone reductase from2 agrobacterium tumefaciens
67 | d1wyza1 |
| not modelled | 36.7 | 8 | Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase
68 | c2q5cA_ |
| not modelled | 36.4 | 14 | PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum
69 | d2f7wa1 |
| not modelled | 35.0 | 13 | Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like
70 | d2b4ro1 |
| not modelled | 34.7 | 15 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
71 | d1y5ma1 |
| not modelled | 34.4 | 21 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
72 | d1rkba_ |
| not modelled | 34.1 | 11 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases
73 | c1zggA_ |
| not modelled | 33.9 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:putative low molecular weight protein-tyrosine- PDBTitle: solution structure of a low molecular weight protein2 tyrosine phosphatase from bacillus subtilis
74 | c3c3mA_ |
| not modelled | 33.5 | 9 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1
75 | d1iy8a_ |
| not modelled | 33.3 | 26 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
76 | d1j9ja_ |
| not modelled | 33.0 | 12 | Fold:SurE-like Superfamily:SurE-like Family:SurE-like
77 | c3h7aC_ |
| not modelled | 32.6 | 13 | PDB header:oxidoreductase Chain: C: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of short-chain dehydrogenase from2 rhodopseudomonas palustris
78 | d1fmca_ |
| not modelled | 32.2 | 23 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
79 | d1gado1 |
| not modelled | 32.2 | 18 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
80 | d1uc8a1 |
| not modelled | 31.5 | 16 | Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Lysine biosynthesis enzyme LysX, N-terminal domain
81 | c3t6oA_ |
| not modelled | 31.0 | 13 | PDB header:transport protein Chain: A: PDB Molecule:sulfate transporter/antisigma-factor antagonist stas; PDBTitle: the structure of an anti-sigma-factor antagonist (stas) domain protein2 from planctomyces limnophilus.
82 | d1yioa2 |
| not modelled | 30.9 | 12 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
83 | c2wmyH_ |
| not modelled | 30.2 | 19 | PDB header:hydrolase Chain: H: PDB Molecule:putative acid phosphatase wzb; PDBTitle: crystal structure of the tyrosine phosphatase wzb from2 escherichia coli k30 in complex with sulphate.
84 | d1u8fo1 |
| not modelled | 29.9 | 16 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
85 | c3lf2B_ |
| not modelled | 29.7 | 28 | PDB header:oxidoreductase Chain: B: PDB Molecule:short chain oxidoreductase q9hya2; PDBTitle: nadph bound structure of the short chain oxidoreductase q9hya2 from2 pseudomonas aeruginosa pao1 containing an atypical catalytic center
86 | d1xu9a_ |
| not modelled | 29.3 | 26 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
87 | c3ivdA_ |
| not modelled | 29.0 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:nucleotidase; PDBTitle: putative 5'-nucleotidase (c4898) from escherichia coli in2 complex with uridine
88 | c3r1iB_ |
| not modelled | 28.9 | 24 | PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: crystal structure of a short-chain type dehydrogenase/reductase from2 mycobacterium marinum
89 | c2fekA_ |
| not modelled | 28.1 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:low molecular weight protein-tyrosine- PDBTitle: structure of a protein tyrosine phosphatase
90 | d1hdca_ |
| not modelled | 27.5 | 18 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
91 | c3ftpD_ |
| not modelled | 27.5 | 22 | PDB header:oxidoreductase Chain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
92 | d1ys7a2 |
| not modelled | 27.3 | 11 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
93 | d1jlja_ |
| not modelled | 27.2 | 10 | Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like
94 | d3gpdg1 |
| not modelled | 27.1 | 15 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
95 | c3i1jB_ |
| not modelled | 27.1 | 17 | PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase, short chain PDBTitle: structure of a putative short chain dehydrogenase from2 pseudomonas syringae
96 | c3jyfB_ |
| not modelled | 27.0 | 21 | PDB header:hydrolase Chain: B: PDB Molecule:2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- PDBTitle: the crystal structure of a 2,3-cyclic nucleotide 2-2 phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor3 protein from klebsiella pneumoniae subsp. pneumoniae mgh 78578
97 | c3oy2A_ |
| not modelled | 26.6 | 15 | PDB header:viral protein,transferase Chain: A: PDB Molecule:glycosyltransferase b736l; PDBTitle: crystal structure of a putative glycosyltransferase from paramecium2 bursaria chlorella virus ny2a
98 | c3rkrC_ |
| not modelled | 26.6 | 24 | PDB header:oxidoreductase Chain: C: PDB Molecule:short chain oxidoreductase; PDBTitle: crystal structure of a metagenomic short-chain oxidoreductase (sdr) in2 complex with nadp
99 | d1y7pa1 |
| not modelled | 26.2 | 27 | Fold:Flavodoxin-like Superfamily:CheY-like Family:AF1403 C-terminal domain-like
100 | d2gdza1 |
| not modelled | 26.1 | 17 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
101 | d2d1ya1 |
| not modelled | 25.9 | 23 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
102 | c2r60A_ |
| not modelled | 25.6 | 17 | PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii
103 | c3nhzA_ |
| not modelled | 25.2 | 13 | PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra
104 | c2wdzD_ |
| not modelled | 24.9 | 19 | PDB header:oxidoreductase Chain: D: PDB Molecule:short-chain dehydrogenase/reductase; PDBTitle: crystal structure of the short chain dehydrogenase2 galactitol-dehydrogenase (gatdh) of rhodobacter3 sphaeroides in complex with nad+ and 1,2-pentandiol
105 | d1uh5a_ |
| not modelled | 24.7 | 9 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
106 | c2is8A_ |
| not modelled | 24.2 | 15 | PDB header:structural protein Chain: A: PDB Molecule:molybdopterin biosynthesis enzyme, moab; PDBTitle: crystal structure of the molybdopterin biosynthesis enzyme moab2 (ttha0341) from thermus theromophilus hb8
107 | d1wmaa1 |
| not modelled | 24.1 | 27 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
108 | c2v4oB_ |
| not modelled | 24.1 | 9 | PDB header:hydrolase Chain: B: PDB Molecule:multifunctional protein sur e; PDBTitle: crystal structure of salmonella typhimurium sure at 2.752 angstrom resolution in monoclinic form
109 | d1th8b_ |
| not modelled | 23.9 | 23 | Fold:SpoIIaa-like Superfamily:SpoIIaa-like Family:Anti-sigma factor antagonist SpoIIaa
110 | c2p91A_ |
| not modelled | 23.5 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:enoyl-[acyl-carrier-protein] reductase [nadh]; PDBTitle: crystal structure of enoyl-[acyl-carrier-protein] reductase (nadh)2 from aquifex aeolicus vf5
111 | c1y7pB_ |
| not modelled | 23.4 | 27 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein af1403; PDBTitle: 1.9 a crystal structure of a protein of unknown function2 af1403 from archaeoglobus fulgidus, probable metabolic3 regulator
112 | d2nlya1 |
| not modelled | 23.3 | 22 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:Divergent polysaccharide deacetylase
113 | c3zu0A_ |
| not modelled | 23.3 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:nad nucleotidase; PDBTitle: structure of haemophilus influenzae nad nucleotidase (nadn)
114 | d1yb1a_ |
| not modelled | 23.2 | 28 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
115 | d1q7ba_ |
| not modelled | 23.0 | 21 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
116 | d1xq1a_ |
| not modelled | 22.8 | 26 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
117 | d1pr9a_ |
| not modelled | 22.8 | 21 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
118 | c2zatC_ |
| not modelled | 21.5 | 24 | PDB header:oxidoreductase Chain: C: PDB Molecule:dehydrogenase/reductase sdr family member 4; PDBTitle: crystal structure of a mammalian reductase
119 | c3f43A_ |
| not modelled | 21.2 | 8 | PDB header:transcription Chain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution
120 | d1yxma1 |
| not modelled | 21.2 | 26 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0