16/01/2012 22:52:11 : INFO  : Run start: Mon Jan 16 22:52:09 GMT 2012
16/01/2012 22:52:21 : INFO  : Initialised job
16/01/2012 22:52:24 : INFO  : Renaming log file 'phyre2_20120116_225208.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/1c836010a4a95bde/phyre_20120116_225208.log'
16/01/2012 22:52:27 : INFO  : Initialised job:
Sequence
>batch____
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYS
PNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGP
VHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPAL
LHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKL
NGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTA
LELAGRGKADVGSFITALNLAIKMIVNTQ

16/01/2012 22:52:29 : INFO  : Checked sequence
16/01/2012 22:52:35 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 22:52:38 : INFO  : PSI-BLAST 3 iterations
16/01/2012 22:54:46 : INFO  : PSI-BLAST 5 iterations
16/01/2012 22:57:03 : INFO  : Finished PSI-BLAST
16/01/2012 22:57:08 : INFO  : Running Buildali to generate a3m file
16/01/2012 23:07:20 : INFO  : Converting to HMM
16/01/2012 23:07:25 : INFO  : Calibrating HMM
16/01/2012 23:07:50 : INFO  : Searching HMM database
16/01/2012 23:15:11 : INFO  : Finished buildali
16/01/2012 23:15:15 : INFO  : Predicting secondary structure
16/01/2012 23:15:31 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 23:15:35 : INFO  : Predicting Disordered regions
16/01/2012 23:15:43 : INFO  : Predicted Disorder (Disopred)
16/01/2012 23:15:46 : INFO  : Running memsat_svm check
16/01/2012 23:19:35 : INFO  : Globular protein
16/01/2012 23:19:37 : INFO  : Predicted Transmembrane (memsat_svm) ID '1c836010a4a95bde'
16/01/2012 23:19:40 : INFO  : Initialising fold library search
16/01/2012 23:19:47 : INFO  : Initialised search input
16/01/2012 23:19:51 : INFO  : Building Ensemble models
16/01/2012 23:19:57 : INFO  : Building hh.d1ptma_.model.1.pdb
16/01/2012 23:20:26 : INFO  : Building hh.d1r8ka_.model.2.pdb
16/01/2012 23:20:49 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/1c836010a4a95bde/hh.d1r8ka_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/1c836010a4a95bde/d1r8ka_.1.pdb
16/01/2012 23:20:55 : INFO  : Building d1r8ka_.1.pdb
16/01/2012 23:21:20 : INFO  : Building d1ptma_.2.pdb
16/01/2012 23:21:44 : INFO  : Building c2hi1A_.3.pdb
16/01/2012 23:22:07 : INFO  : Building c1yxoB_.4.pdb
16/01/2012 23:22:30 : INFO  : Building d1u7na_.5.pdb
16/01/2012 23:22:55 : INFO  : Building d1vi1a_.6.pdb
16/01/2012 23:23:21 : INFO  : Building c2iv0A_.7.pdb
16/01/2012 23:23:44 : INFO  : Building d1xcoa_.8.pdb
16/01/2012 23:24:07 : INFO  : Building c1ycoA_.9.pdb
16/01/2012 23:24:31 : INFO  : Building d2af4c1.10.pdb
16/01/2012 23:24:56 : INFO  : Building d1r5ja_.11.pdb
16/01/2012 23:25:22 : INFO  : Building c1tyoA_.12.pdb
16/01/2012 23:25:46 : INFO  : Building c3tngA_.13.pdb
16/01/2012 23:26:12 : INFO  : Building d1vmia_.14.pdb
16/01/2012 23:26:40 : INFO  : Building c1vmiA_.15.pdb
16/01/2012 23:27:05 : INFO  : Building d1wpwa_.16.pdb
16/01/2012 23:27:30 : INFO  : Building d1cnza_.17.pdb
16/01/2012 23:27:56 : INFO  : Building d1a05a_.18.pdb
16/01/2012 23:28:22 : INFO  : Building d1cm7a_.19.pdb
16/01/2012 23:28:45 : INFO  : Building c3r8wC_.20.pdb
16/01/2012 23:30:10 : INFO  : Finished HH model building
16/01/2012 23:30:13 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 23:31:20 : INFO  : html domain output complete ID '1c836010a4a95bde'
17/01/2012 01:50:59 : INFO  : Run end  : Tue Jan 17 01:50:58 GMT 2012
