16/01/2012 14:27:56 : INFO  : Run start: Mon Jan 16 14:27:54 GMT 2012
16/01/2012 14:28:06 : INFO  : Initialised job
16/01/2012 14:28:09 : INFO  : Renaming log file 'phyre2_20120116_142752.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/1be3331859e83b7c/phyre_20120116_142752.log'
16/01/2012 14:28:11 : INFO  : Initialised job:
Sequence
>batch____
MIRKNKWLRFQTVCRYIPLSLKNHNRLVIFVCQRIEWRYIFSTNTGHPLKNTCEMTGTDF
STDGLMRRYVTGGNNQWHTVASLHMTIMMNRIGTVADRQPKARKVKHGEMT

16/01/2012 14:28:14 : INFO  : Checked sequence
16/01/2012 14:28:19 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 14:28:22 : INFO  : PSI-BLAST 3 iterations
16/01/2012 14:29:02 : INFO  : PSI-BLAST 5 iterations
16/01/2012 14:29:50 : INFO  : Finished PSI-BLAST
16/01/2012 14:29:54 : INFO  : Running Buildali to generate a3m file
16/01/2012 14:32:05 : INFO  : Converting to HMM
16/01/2012 14:32:08 : INFO  : Calibrating HMM
16/01/2012 14:32:23 : INFO  : Searching HMM database
16/01/2012 14:34:50 : INFO  : Finished buildali
16/01/2012 14:34:53 : INFO  : Predicting secondary structure
16/01/2012 14:35:09 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 14:35:12 : INFO  : Predicting Disordered regions
16/01/2012 14:35:20 : INFO  : Predicted Disorder (Disopred)
16/01/2012 14:35:23 : INFO  : Running memsat_svm check
16/01/2012 14:39:19 : INFO  : Running memsat_svm full
16/01/2012 14:42:03 : INFO  : Predicted Transmembrane (memsat_svm) ID '1be3331859e83b7c'
16/01/2012 14:42:07 : INFO  : Initialising fold library search
16/01/2012 14:42:13 : INFO  : Initialised search input
16/01/2012 14:42:18 : INFO  : Building Ensemble models
16/01/2012 14:42:25 : INFO  : Building hh.c3dw8B_.model.1.pdb
16/01/2012 14:42:56 : INFO  : Building c3dw8B_.1.pdb
16/01/2012 14:43:26 : INFO  : Building d1jl3a_.2.pdb
16/01/2012 14:43:57 : INFO  : Building c3nctC_.3.pdb
16/01/2012 14:44:26 : INFO  : Building c2krcA_.4.pdb
16/01/2012 14:44:55 : INFO  : Building d2noca1.5.pdb
16/01/2012 14:45:24 : INFO  : Building c2pxgA_.6.pdb
16/01/2012 14:45:53 : INFO  : Building c2jv5A_.7.pdb
16/01/2012 14:46:23 : INFO  : Building c2kxxA_.8.pdb
16/01/2012 14:46:54 : INFO  : Building d2igia1.9.pdb
16/01/2012 14:47:24 : INFO  : Building c1y8aA_.10.pdb
16/01/2012 14:47:54 : INFO  : Building c2ko2A_.11.pdb
16/01/2012 14:48:22 : INFO  : Building c1x9dA_.12.pdb
16/01/2012 14:48:49 : INFO  : Building d1x9da1.13.pdb
16/01/2012 14:49:17 : INFO  : Building c2kerA_.14.pdb
16/01/2012 14:49:44 : INFO  : Building d1ok0a_.15.pdb
16/01/2012 14:50:12 : INFO  : Building c3asiA_.16.pdb
16/01/2012 14:50:39 : INFO  : Building d1hcua_.17.pdb
16/01/2012 14:51:07 : INFO  : Building c3d3rA_.18.pdb
16/01/2012 14:51:34 : INFO  : Building d1p2za2.19.pdb
16/01/2012 14:52:02 : INFO  : Building d1hnfa2.20.pdb
16/01/2012 14:53:01 : INFO  : Finished HH model building
16/01/2012 14:53:04 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 14:55:54 : INFO  : html domain output complete ID '1be3331859e83b7c'
16/01/2012 15:05:16 : INFO  : Run end  : Mon Jan 16 15:05:14 GMT 2012
