15 c1l0lB_ Probab=100.00  E-value=0  Score=370.37  Aligned_columns=397  Identities=11%

Q ss_pred             CCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             88887389982888099999878998027999999714536599999881379999872257878988999999989987
Q batch____        28 QPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQQGIDP  107 (498)
Q Consensus        28 ~~~~~~~~~~L~NGl~v~~~~~~~~p~~~v~~~l~v~~Gs~~E~~~~~G~Ah~lEhl~f~Gt~~~~~~~~~~~~~~~~~~  107 (498)
                      +.+++++.++|+||+||++.+++ .|.  +++.+++++||++|++++.|+||++|||+|+||++|+..++.+.++.    
T Consensus         3 p~~~~~~~~~L~NGl~v~~~~~~-~~~--~~i~l~~~~Gs~~e~~~~~G~a~lle~l~~~Gt~~~~~~~l~~~~~~----   75 (423)
T c1l0lB_           3 PHPQDLEFTRLPNGLVIASLENY-APA--SRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIEA----   75 (423)
T ss_dssp             CCCCCCEEEECTTSCEEEEECCC-CSE--EEEEEEESCSGGGCCTTSTTHHHHHHHTTTSCBTTBCHHHHHHHHHH----
T ss_pred             CCCCCEEEEECCCCEEEEEEECC-CCE--EEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH----
T ss_conf             78887289984887199998089-987--99999974533458899987579999997323379998999999997----


Q ss_pred             HCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH----HHHHC
Q ss_conf             08756723277537999970347988899999999999836788989999999999999733127989999----99837
Q batch____       108 KRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWW----RYRLK  183 (498)
Q Consensus       108 ~g~~~nA~T~~d~T~y~~~~~~~~~~~l~~~l~~l~d~~~~p~~~~~~~e~e~~~~~~~~~~~~~~~~~~~----~~~~~  183 (498)
                      .|+.+|++|+++.|+|+++++   .++++.+|+++.+++.+|.|++++++++++....+.......+...+    ...+|
T Consensus        76 ~g~~~~~~t~~~~~~~~~~~~---~~~l~~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (423)
T c1l0lB_          76 VGGKLSVTSTRENMAYTVECL---RDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAY  152 (423)
T ss_dssp             TTCEEEEEECSSCEEEEEEEE---GGGHHHHHHHHHHHHHCBCCCHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHB
T ss_pred             CCCEEEEEECCHHEEEEECCC---HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf             098799997301312210236---02377767778999728689989999999999986764208989999999999845


Q ss_pred             CCCCCCCCCCCCHH--HCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88888888886845--4099999999999862334237998448998999999999842076767898878876765687
Q batch____       184 GSTLLGHDPADPLK--QPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAE  261 (498)
Q Consensus       184 ~~~~~~~~~~g~~~--~~~t~e~l~~f~~~~Y~p~n~~lvivGdid~~~~~~~i~~~fg~~~~~~~~~~~~~~~~~~~~~  261 (498)
                      ++. +.+.+.|+..  +++|.+++++||++||+|+|++++|+|+ +++++.++++++|+.+++.     +.+...+....
T Consensus       153 ~~~-~~~~~~~~~~~l~~it~~~l~~f~~~~~~~~~~~l~i~g~-~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~  225 (423)
T c1l0lB_         153 RNA-LANSLYCPDYRIGKVTPVELHDYVQNHFTSARMALIGLGV-SHPVLKQVAEQFLNIRGGL-----GLSGAKAKYHG  225 (423)
T ss_dssp             SSG-GGSCSSCCGGGTTTCCHHHHHHHHHHHSSGGGEEEEEESS-CHHHHHHHHHHHCCCCCSC-----CSCTTCCCBCC
T ss_pred             CCC-CCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEC-CHHHHHHHHHHHCCCCCCC-----CCCCCCCCCCC
T ss_conf             754-5888789968874199899999999732337806999838-9899999999741234567-----89975456788


Q ss_pred             EEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCH--------HHHHHHHHHHCCCCEEEEEEECCCCCCC
Q ss_conf             28997168884069999638887888788999999999720000--------2389999974027646887641467652
Q batch____       262 AVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREAL--------FWHVQQALSASNSKDIGLGFDCRVLYLR  333 (498)
Q Consensus       262 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l--------~~~L~~~l~~~~~~~~~~~~~~~~~~~~  333 (498)
                      .......+..+..+.+.|..+..  .........++..++++..        .++|++.+|++.|++|+++++.......
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~il~~~~~~~l~~~~~s~l~~~lre~~gl~y~~~~~~~~~~~~  303 (423)
T c1l0lB_         226 GEIREQNGDSLVHAALVAESAAI--GSAEANAFSVLQHVLGAGPHVKRGSNATSSLYQAVAKGVHQPFDVSAFNASYSDS  303 (423)
T ss_dssp             EEEEEECCCSEEEEEEEEECCCT--TSHHHHHHHHHHHHHCCSCSSTTCCCTTCHHHHHHHHHCCSSEEEEEEEEECSSC
T ss_pred             CEEEEECCCCEEEEEEEECCCCC--CCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf             52675078850379985215888--8810159999999842210344301233358899985259621466402544321


Q ss_pred             EEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf             38999996691348999999999999999669998999999999999999875101234358999999999844986689
Q batch____       334 AQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIA  413 (498)
Q Consensus       334 ~~~~i~~~~~~~~~~~~~~~i~~~l~~l~~~git~eel~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  413 (498)
                      +.+.+.+.+++++.+++++.+.++|++++.+|+|++||+++|+.++.++....     .+...+++.+...+..+.....
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~is~~el~~ak~~l~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~  378 (423)
T c1l0lB_         304 GLFGFYTISQAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKLKAGYLMSV-----ESSEGFLDEVGSQALAAGSYTP  378 (423)
T ss_dssp             EEEEEEEEEEGGGHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHT-----SSHHHHHHHHHHHHHHHSSCCC
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHCCCCCC
T ss_conf             22343340780008999999999999998579998999999999999999613-----8989999999999982888579


Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             789999999998727989999999986487886999944
Q batch____       414 PEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILLQP  452 (498)
Q Consensus       414 p~~~~~~~~~~i~~iT~edv~~~a~~~l~~~~~~vvv~~  452 (498)
                      ..++.+.    ++++|++||+++++++|.++..++++.+
T Consensus       379 ~~~~~~~----i~~vt~~dv~~~~~~~l~~~~~~~vvG~  413 (423)
T c1l0lB_         379 PSTVLQQ----IDAVADADVINAAKKFVSGRKSMAASGN  413 (423)
T ss_dssp             HHHHHHH----HHTCCHHHHHHHHHHHHHSCEEEEEEEC
T ss_pred             HHHHHHH----HHCCCHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             8999998----8638989999999996067957999726