20 c3csgA_ Probab=100.00  E-value=0  Score=250.24  Aligned_columns=336  Identities=14%

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCC--CCEEEECHHHHHHHHHCCCCCCCCCCC
Q ss_conf             999814766801468999999999987488899996587899999973479--988980816899999888945333221
Q batch____        37 DIIAWPGYIERGQTDKQYDWVTQFEKETGCAVNVKTAATSDEMVSLMTKGG--YDLVTASGDASLRLIMGKRVQPINTAL  114 (381)
Q Consensus        37 ~i~~w~~~~~~~~~~~~~~~i~~Fe~~~gi~V~~~~~~~~~~~~~~~~~~~--~Dv~~~~~~~~~~~~~~g~l~~l~~~~  114 (381)
                      ++++|.+  ++...+.+.+++++|||++||+|+++..+..++......+++  |||+.++..++..++++|+|+||++. 
T Consensus         1 ~l~vW~~--~~~~~~~~~e~~~~Fek~tGIkV~~~~~~d~~~kl~~~~asG~~PDI~~~~~~~~~~~~~~G~L~~L~~~-   77 (458)
T c3csgA_           1 KLVIWIN--GDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPD-   77 (458)
T ss_dssp             CEEEECC--TTSCHHHHHHHHHHHHHHHCCCEEEECCTTHHHHHHHHHTTTCSCSEEEEEHHHHHHHHHTTCBCCCCCC-
T ss_pred             CEEEEEE--CCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCEECCCCH-
T ss_conf             5899970--8535789999999872037968999862107999999983899971999872127889978982137810-


Q ss_pred             CCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHH
Q ss_conf             02322379777101103538845456421564111000000112347716675089874420357812103582679999
Q batch____       115 IPNWKTLDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKGRVQAYDGPIYIADA  194 (381)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~yn~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (381)
                      ....+.+.+...+...  ++|++|++|+..+..+++||++++++.|+||+||.+.+++++..+..+.............+
T Consensus        78 ~~~~d~~~~~~~~~~~--~dGk~YgiP~~~~~~~l~YNkdlf~e~P~Twdel~~~a~klk~~g~~~~~~~~~~~~~~~~~  155 (458)
T c3csgA_          78 KAFQDKLYPFTWDAVR--YNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL  155 (458)
T ss_dssp             HHHHTTBCHHHHHTTE--ETTEECSEEEEEECCEEEEETTTCSSCCSBGGGHHHHHHHHHTTTCEEECCCTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHEE--ECCEEEEEECCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
T ss_conf             4356530256563077--88979997527714799980666121236888999999998857983067336420579999


Q ss_pred             HHHHHHCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHCCCEEEEEECHHHHHHHHHCCC
Q ss_conf             999971246567778----5435758999999999987523564568-81678888634775899825168999984599
Q batch____       195 ALFVKATQPQLGISD----PYQLTEEQYQAVLKVLRAQHSLIHRYWH-DTTVQMSDFKNEGVVASSAWPYQANALKAEGQ  269 (381)
Q Consensus       195 ~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~~l~~~~~~~~~-~~~~~~~~f~~G~~a~~~~~~~~~~~~~~~~~  269 (381)
                      .....+.........    ...+++++.+++++++.+|.+.+..... ++.+....|.+|+++|.+.|+|....++..+.
T Consensus       156 ~~~~gg~~~~~~~~~~~~~~~~l~sp~~~~al~~~~~l~~~g~~~~~~~~~~~~~~F~~G~~am~~~g~w~~~~~~~~~~  235 (458)
T c3csgA_         156 IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV  235 (458)
T ss_dssp             HHHTTCEEEEECSSSEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTCEEEEEECGGGHHHHHHHTC
T ss_pred             HHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHCCCC
T ss_conf             99856420012685234566343899999999999999970898988897789899864974599845033556741798


Q ss_pred             CEEEE-EC-----CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCC
Q ss_conf             41797-67-----9986001104799889889889999999981889999999970885889778661803235532000
Q batch____       270 PVATV-FP-----KEGVTGWADTTMLHSEAKHPVCAYKWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPLLGEKGCETN  343 (381)
Q Consensus       270 ~~~~~-~P-----~~g~~~~~~~~~I~~~sk~~~aA~~fi~~l~s~e~q~~~a~~~g~~P~~~~a~~~~~~~~~~~~~~~  343 (381)
                      ++.+. +|     ...+..++.+++|+++|||||+|++||+|+++.+.+.+.....+.+|+.................. 
T Consensus       236 ~~~v~~~P~~~g~~~~~~~g~~~~~I~~~SknkeaA~~Fl~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-  314 (458)
T c3csgA_         236 NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAA-  314 (458)
T ss_dssp             CEEEECCCEETTEECCCEEEEEEEEEBTTCTTHHHHHHHHHHTTSSHHHHHHHHHHSCCCEESBHHHHHHHTTSHHHHH-
T ss_pred             CCCEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHH-
T ss_conf             6136871356888774167878899828987989999999988399899999973189887421001114431832899-


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf             12365543200133346666665899999999975689
Q batch____       344 GFNYFDKIAFWKTPIAEGGKFVPYSRWTQDYIAIMGGR  381 (381)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~v~~g~  381 (381)
                         +.+................-.....+..++++.|+
T Consensus       315 ---~~~~~~~~~~~P~~p~~~~i~~~i~~al~~a~~G~  349 (458)
T c3csgA_         315 ---TMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGR  349 (458)
T ss_dssp             ---HHHHHHHSEECCCSTTHHHHHHHHHHHHHHHHHTS
T ss_pred             ---HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             ---99987428346688448889999999999985035